Rodentia ANCESTRAL SPECIES 7 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Rodentia_B ANCESTRAL SPECIES 46 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000162246 ENSGT01090000260018.A.a.a.b.b ##37 ENSGT01090000259995.a.a.b.a.b.b ENSGT01090000259995.a.a.a ENSGT00390000010671 ENSGT00730000111648 Myomorpha ANCESTRAL SPECIES 28 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 ENSGT01090000259995.b.b.a.b ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 Muroidea ANCESTRAL SPECIES 10 ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 ENSGT01090000259995.b.b.a.b ENSGT01100000263486.a.b.a.b.b.a.a ENSGT00940000162246 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Cricetidae ANCESTRAL SPECIES ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Cricetinae ANCESTRAL SPECIES ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Chinese hamster chok1gshd MODERN SPECIES 229 Nlrp3 (ENSCGRG00001021138) #7 ENSCGRG00001021260 #8 Zkscan17 (ENSCGRG00001020767) #9 Zfp867 (ENSCGRG00001016010) #10 Jmjd4 (ENSCGRG00001013252) #11 Snap47 (ENSCGRG00001004500) #12 Prss38 (ENSCGRG00001019522) #13 Wnt9a (ENSCGRG00001016816) #14 Wnt3a (ENSCGRG00001015217) #15 Arf1 (ENSCGRG00001013922) #16 2310033P09Rik (ENSCGRG00001021154) #17 Mrpl55 (ENSCGRG00001020506) #18 ENSCGRG00001016847 #19 Gjc2 (ENSCGRG00001008796) #20 Iba57 (ENSCGRG00001007484) #21 Obscn (ENSCGRG00001023809) #22 Trim11 (ENSCGRG00001016227) #23 Trim17 (ENSCGRG00001017038) #24 ENSCGRG00001009610 #25 H2bc27 (ENSCGRG00001005703) #26 H2bc26-ps (ENSCGRG00001013795) #27 H2ac25 (ENSCGRG00001008750) #28 ENSCGRG00001017170 #29 ENSCGRG00001015992 #30 Zfp39 (ENSCGRG00001002406) #31 2810021J22Rik (ENSCGRG00001001041) #32 ENSCGRG00001012941 #33 ENSCGRG00001007292 #34 ENSCGRG00001008023 #35 Fam183b (ENSCGRG00001024113) #36 Or2t44 (ENSCGRG00001022873) #37 Golden Hamster MODERN SPECIES 627 Nlrp3 (ENSMAUG00000020051) #7 ENSMAUG00000006329 ENSMAUG00000017910 #8 Zkscan17 (ENSMAUG00000016630) #9 ENSMAUG00000019046 Jmjd4 (ENSMAUG00000017265) #11 Snap47 (ENSMAUG00000020014) #12 Prss38 (ENSMAUG00000019978) #13 Wnt9a (ENSMAUG00000021643) #14 Wnt3a (ENSMAUG00000021475) #15 ENSMAUG00000022253 #16 2310033P09Rik (ENSMAUG00000019958) #17 Guk1 (ENSMAUG00000022283) #19 Gjc2 (ENSMAUG00000020150) #20 Iba57 (ENSMAUG00000020575) #21 Obscn (ENSMAUG00000022279) #22 Trim11 (ENSMAUG00000001510) #23 Trim17 (ENSMAUG00000004817) #24 H3f4 (ENSMAUG00000010700) #25 ENSMAUG00000010470 H2ac25 (ENSMAUG00000010628) #28 H2bc26-ps (ENSMAUG00000010794) #27 H2bc27 (ENSMAUG00000010540) #26 ENSMAUG00000021471 #29 ENSMAUG00000020727 Btnl10 (ENSMAUG00000021399) Zfp39 (ENSMAUG00000001536) #31 ENSMAUG00000002461 ##32 ENSMAUG00000002837 Fam183b (ENSMAUG00000021857) #36 ENSMAUG00000010641 Cricetidae_B ANCESTRAL SPECIES ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Northern American deer mouse MODERN SPECIES 21 Nlrp3 (ENSPEMG00000018349) #7 Zkscan17 (ENSPEMG00000028678) #9 Zfp867 (ENSPEMG00000015201) #10 Jmjd4 (ENSPEMG00000025158) #11 Snap47 (ENSPEMG00000003186) #12 Prss38 (ENSPEMG00000000315) #13 ENSPEMG00000026476 Wnt9a (ENSPEMG00000008917) #14 Wnt3a (ENSPEMG00000014970) #15 Arf1 (ENSPEMG00000024884) #16 2310033P09Rik (ENSPEMG00000016726) #17 Mrpl55 (ENSPEMG00000010381) #18 Guk1 (ENSPEMG00000007733) #19 Gjc2 (ENSPEMG00000015748) #20 Iba57 (ENSPEMG00000029448) #21 Obscn (ENSPEMG00000017360) #22 Trim11 (ENSPEMG00000013300) #23 Trim17 (ENSPEMG00000012957) #24 H3f4 (ENSPEMG00000028465) #25 H2ac25 (ENSPEMG00000025825) #28 H2bc26-ps (ENSPEMG00000029564) #27 H2bc27 (ENSPEMG00000029370) #26 ENSPEMG00000024885 #29 Btnl10 (ENSPEMG00000010544) Zfp39 (ENSPEMG00000009428) #31 2810021J22Rik (ENSPEMG00000028205) #32 Gm12258 (ENSPEMG00000029020) ##32 ENSPEMG00000027643 #34 ENSPEMG00000025827 #34 Fam183b (ENSPEMG00000020878) #36 Or2t44 (ENSPEMG00000022635) #37 Prairie vole MODERN SPECIES 15 ENSMOCG00000004021 ENSMOCG00000007500 #8 Zkscan17 (ENSMOCG00000021773) #9 Zfp867 (ENSMOCG00000017475) #10 Jmjd4 (ENSMOCG00000019517) #11 Snap47 (ENSMOCG00000021698) #12 Prss38 (ENSMOCG00000020492) #13 Wnt9a (ENSMOCG00000022972) #14 Wnt3a (ENSMOCG00000022805) #15 Arf1 (ENSMOCG00000005344) #16 2310033P09Rik (ENSMOCG00000020633) #17 Mrpl55 (ENSMOCG00000022355) #18 Guk1 (ENSMOCG00000020868) #19 Gjc2 (ENSMOCG00000015445) #20 Iba57 (ENSMOCG00000019048) #21 Obscn (ENSMOCG00000009245) #22 Trim11 (ENSMOCG00000021941) #23 Trim17 (ENSMOCG00000016644) #24 H3f4 (ENSMOCG00000002973) #25 H2ac25 (ENSMOCG00000002942) #28 H2bc26-ps (ENSMOCG00000003080) #27 H2bc27 (ENSMOCG00000002061) #26 Rnf187 (ENSMOCG00000021645) Btnl10 (ENSMOCG00000005486) Zfp39 (ENSMOCG00000017961) #31 ENSMOCG00000003250 ##32 ENSMOCG00000006893 Fam183b (ENSMOCG00000013813) #36 ENSMOCG00000011805 ##37 ENSMOCG00000002169 Trim58 (ENSMOCG00000019086) Murinae ANCESTRAL SPECIES 7 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00950000183522 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Mus ANCESTRAL SPECIES 2 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00950000183522 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 ENSGT01090000259995.b.b.a.b.i Mus_A ANCESTRAL SPECIES 2 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00950000183522 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 ENSGT01090000259995.b.b.a.b.i.c.b Ryukyu mouse MODERN SPECIES 2 Nlrp3 (MGP_CAROLIEiJ_G0016439) #7 Zkscan17 (MGP_CAROLIEiJ_G0016438) #9 Zfp867 (MGP_CAROLIEiJ_G0016437) #10 Jmjd4 (MGP_CAROLIEiJ_G0016436) #11 MGP_CAROLIEiJ_G0016435 #12 Prss38 (MGP_CAROLIEiJ_G0016434) #13 Wnt9a (MGP_CAROLIEiJ_G0016433) #14 Wnt3a (MGP_CAROLIEiJ_G0016432) #15 MGP_CAROLIEiJ_G0016431 #16 MGP_CAROLIEiJ_G0016430 #16 2310033P09Rik (MGP_CAROLIEiJ_G0016429) #17 Mrpl55 (MGP_CAROLIEiJ_G0016428) #18 Guk1 (MGP_CAROLIEiJ_G0016427) #19 Gjc2 (MGP_CAROLIEiJ_G0016426) #20 Iba57 (MGP_CAROLIEiJ_G0016425) #21 MGP_CAROLIEiJ_G0016424 #22 Trim11 (MGP_CAROLIEiJ_G0016423) #23 Trim17 (MGP_CAROLIEiJ_G0016421) #24 H2ac25 (MGP_CAROLIEiJ_G0016422) #28 H2bc27 (MGP_CAROLIEiJ_G0016420) #26 MGP_CAROLIEiJ_G0016419 Btnl10 (MGP_CAROLIEiJ_G0016418) Zfp39 (MGP_CAROLIEiJ_G0016417) #31 2810021J22Rik (MGP_CAROLIEiJ_G0016416) #32 Gm12258 (MGP_CAROLIEiJ_G0016415) ##32 Fam183b (MGP_CAROLIEiJ_G0016414) #36 Or2t44 (MGP_CAROLIEiJ_G0016413) #37 Or2t45 (MGP_CAROLIEiJ_G0016412) ##37 MGP_CAROLIEiJ_G0016411 MGP_CAROLIEiJ_G0016410 MGP_CAROLIEiJ_G0016409 Mus_B ANCESTRAL SPECIES 2 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.a #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00950000183522 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a.l #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Mouse MODERN SPECIES 2 Or2b11 (ENSMUSG00000059610) Nlrp3 (ENSMUSG00000032691) #7 Zkscan17 (ENSMUSG00000020472) #9 Zfp867 (ENSMUSG00000054519) #10 Jmjd4 (ENSMUSG00000036819) #11 Snap47 (ENSMUSG00000009894) #12 Prss38 (ENSMUSG00000049291) #13 Wnt9a (ENSMUSG00000000126) #14 Wnt3a (ENSMUSG00000009900) #15 Arf1 (ENSMUSG00000048076) #16 2310033P09Rik (ENSMUSG00000020441) #17 Mrpl55 (ENSMUSG00000036860) #18 Guk1 (ENSMUSG00000020444) #19 Gjc2 (ENSMUSG00000043448) #20 Iba57 (ENSMUSG00000049287) #21 Obscn (ENSMUSG00000061462) #22 Trim11 (ENSMUSG00000020455) #23 H3f4 (ENSMUSG00000080152) #25 Trim17 (ENSMUSG00000036964) #24 H2ac25 (ENSMUSG00000078851) #28 H2bc26-ps (ENSMUSG00000080712) #27 H2bc27 (ENSMUSG00000056895) #26 Rnf187 (ENSMUSG00000020496) Btnl10 (ENSMUSG00000020490) Zfp39 (ENSMUSG00000037001) #31 2810021J22Rik (ENSMUSG00000020491) #32 Gm12258 (ENSMUSG00000072915) ##32 Or9e1 (ENSMUSG00000094805) #34 Or5af1 (ENSMUSG00000096806) #34 Or5af2 (ENSMUSG00000070438) #34 Fam183b (ENSMUSG00000049154) #36 Mus_C ANCESTRAL SPECIES 3 ENSGT00940000162415 #7 ENSGT00900000143207 #8 ENSGT00940000161967 #9 ENSGT00950000182755.b.a.a.a.a.b #10 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b.g.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00950000183522 ENSGT00940000163997 ENSGT00940000160177 #31 ENSGT00940000159981.e.a #32 ENSGT00940000159981.e.b ##32 ENSGT01060000248581.C.a.b.a.a.l #34 ENSGT00390000006224 #36 ENSGT01090000260018.C.b.a.a #37 ENSGT01090000260018.C.a ##37 Steppe mouse MODERN SPECIES 3105 Zkscan17 (ENSMSIG00000020997) #9 ENSMSIG00000021018 Zfp867 (ENSMSIG00000021023) #10 Jmjd4 (ENSMSIG00000021041) #11 Snap47 (ENSMSIG00000021067) #12 Prss38 (ENSMSIG00000021101) #13 Wnt9a (ENSMSIG00000021113) #14 Wnt3a (ENSMSIG00000021119) #15 ENSMSIG00000021128 #16 2310033P09Rik (ENSMSIG00000021149) #17 Mrpl55 (ENSMSIG00000021173) #18 Guk1 (ENSMSIG00000021189) #19 Gjc2 (ENSMSIG00000021219) #20 Iba57 (ENSMSIG00000021231) #21 ENSMSIG00000021247 Obscn (ENSMSIG00000021262) #22 ENSMSIG00000021680 Trim11 (ENSMSIG00000021692) #23 Trim17 (ENSMSIG00000021747) #24 H3f4 (ENSMSIG00000021760) #25 H2ac25 (ENSMSIG00000021773) #28 H2bc26-ps (ENSMSIG00000021777) #27 H2bc27 (ENSMSIG00000021813) #26 ENSMSIG00000021818 Btnl10 (ENSMSIG00000021827) Zfp39 (ENSMSIG00000021841) #31 2810021J22Rik (ENSMSIG00000021856) #32 Gm12258 (ENSMSIG00000021863) ##32 Or5af2 (ENSMSIG00000021882) #34 ENSMSIG00000021888 #36 Or2t44 (ENSMSIG00000021908) #37 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017276 Or2b11 (MGP_SPRETEiJ_G0017275) Nlrp3 (MGP_SPRETEiJ_G0017274) #7 Zkscan17 (MGP_SPRETEiJ_G0017273) #9 Zfp867 (MGP_SPRETEiJ_G0017272) #10 Jmjd4 (MGP_SPRETEiJ_G0017271) #11 Snap47 (MGP_SPRETEiJ_G0017270) #12 Prss38 (MGP_SPRETEiJ_G0017269) #13 Wnt9a (MGP_SPRETEiJ_G0017268) #14 Wnt3a (MGP_SPRETEiJ_G0017267) #15 2310033P09Rik (MGP_SPRETEiJ_G0017266) #17 Mrpl55 (MGP_SPRETEiJ_G0017265) #18 Guk1 (MGP_SPRETEiJ_G0017264) #19 Gjc2 (MGP_SPRETEiJ_G0017263) #20 Iba57 (MGP_SPRETEiJ_G0017262) #21 Obscn (MGP_SPRETEiJ_G0017261) #22 Trim11 (MGP_SPRETEiJ_G0017260) #23 Trim17 (MGP_SPRETEiJ_G0017259) #24 H2ac25 (MGP_SPRETEiJ_G0017258) #28 H2bc27 (MGP_SPRETEiJ_G0017257) #26 MGP_SPRETEiJ_G0017256 Btnl10 (MGP_SPRETEiJ_G0017255) Zfp39 (MGP_SPRETEiJ_G0017254) #31 2810021J22Rik (MGP_SPRETEiJ_G0017253) #32 Gm12258 (MGP_SPRETEiJ_G0017252) ##32 Fam183b (MGP_SPRETEiJ_G0017251) #36 Or2t44 (MGP_SPRETEiJ_G0017250) #37 Or2t45 (MGP_SPRETEiJ_G0017249) ##37 MGP_SPRETEiJ_G0017248 MGP_SPRETEiJ_G0017247 Or11l3 (MGP_SPRETEiJ_G0017246) Shrew mouse MODERN SPECIES 5 Or2b11 (MGP_PahariEiJ_G0017570) MGP_PahariEiJ_G0017569 #7 Zkscan17 (MGP_PahariEiJ_G0017568) #9 Zfp867 (MGP_PahariEiJ_G0017567) #10 Jmjd4 (MGP_PahariEiJ_G0017566) #11 MGP_PahariEiJ_G0017565 #12 Prss38 (MGP_PahariEiJ_G0017564) #13 Wnt9a (MGP_PahariEiJ_G0017563) #14 Wnt3a (MGP_PahariEiJ_G0017562) #15 Arf1 (MGP_PahariEiJ_G0017561) #16 2310033P09Rik (MGP_PahariEiJ_G0017560) #17 Mrpl55 (MGP_PahariEiJ_G0017559) #18 Guk1 (MGP_PahariEiJ_G0017558) #19 Gjc2 (MGP_PahariEiJ_G0017557) #20 Iba57 (MGP_PahariEiJ_G0017556) #21 Obscn (MGP_PahariEiJ_G0017555) #22 Trim11 (MGP_PahariEiJ_G0017554) #23 Trim17 (MGP_PahariEiJ_G0017553) #24 H2ac25 (MGP_PahariEiJ_G0017552) #28 H2bc27 (MGP_PahariEiJ_G0017551) #26 MGP_PahariEiJ_G0017550 Btnl10 (MGP_PahariEiJ_G0017549) Zfp39 (MGP_PahariEiJ_G0017548) #31 2810021J22Rik (MGP_PahariEiJ_G0017547) #32 Gm12258 (MGP_PahariEiJ_G0017546) ##32 Fam183b (MGP_PahariEiJ_G0017545) #36 Or2t44 (MGP_PahariEiJ_G0017544) #37 Or2t45 (MGP_PahariEiJ_G0017543) ##37 Trim58 (MGP_PahariEiJ_G0017542) Or11l3 (MGP_PahariEiJ_G0017541) MGP_PahariEiJ_G0017540 Rat MODERN SPECIES 1 Nlrp3 (ENSRNOG00000003170) #7 Zfp496 (ENSRNOG00000003129) #9 Ftl1 (ENSRNOG00000020843) Zfp867 (ENSRNOG00000022431) #10 Jmjd4 (ENSRNOG00000022438) #11 Snap47 (ENSRNOG00000022472) #12 Prss38 (ENSRNOG00000022548) #13 Wnt9a (ENSRNOG00000003066) #14 Wnt3a (ENSRNOG00000003039) #15 Arf1 (ENSRNOG00000060229) #16 C10h1orf35 (ENSRNOG00000002944) #17 Mrpl55 (ENSRNOG00000002943) #18 Guk1 (ENSRNOG00000002928) #19 Gjc2 (ENSRNOG00000038328) #20 Iba57 (ENSRNOG00000068756) #21 Obscn (ENSRNOG00000058068) #22 Trim11 (ENSRNOG00000002915) #23 H2ac25 (ENSRNOG00000022983) #24 H2ac25 (ENSRNOG00000064520) #28 H2bu1 (ENSRNOG00000066919) #27 Hist3h2ba (ENSRNOG00000043419) #26 Rnf187 (ENSRNOG00000049219) Btnl10 (ENSRNOG00000043019) Zfp39 (ENSRNOG00000014712) #31 LOC102555635 (ENSRNOG00000023431) #32 RGD1561277 (ENSRNOG00000051868) Or9e1b (ENSRNOG00000062948) #34 Or5af1c (ENSRNOG00000069086) #34 Or5af1 (ENSRNOG00000069128) #34 Or5af1b (ENSRNOG00000065010) #34 Cfap144 (ENSRNOG00000002873) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 540 Guk1 (ENSNGAG00000022722) #19 Gjc2 (ENSNGAG00000022035) #20 Iba57 (ENSNGAG00000021761) #21 Obscn (ENSNGAG00000023799) #22 Trim11 (ENSNGAG00000023375) #23 Trim17 (ENSNGAG00000023965) #24 ENSNGAG00000011099 ##25 H2ac25 (ENSNGAG00000012071) #28 H2bc26-ps (ENSNGAG00000012301) #27 H2bc27 (ENSNGAG00000010344) #26 ENSNGAG00000019603 #29 Btnl10 (ENSNGAG00000011467) Zfp39 (ENSNGAG00000019853) #31 ENSNGAG00000012548 2810021J22Rik (ENSNGAG00000011744) #32 ENSNGAG00000024130 Fam183b (ENSNGAG00000019487) #36 ENSNGAG00000003871 ENSNGAG00000011228 Lesser Egyptian jerboa MODERN SPECIES 63 Or2b11 (ENSJJAG00000004515) Nlrp3 (ENSJJAG00000007323) #7 Zkscan17 (ENSJJAG00000022828) #9 Zfp867 (ENSJJAG00000008459) #10 Jmjd4 (ENSJJAG00000012776) #11 Snap47 (ENSJJAG00000023009) #12 Prss38 (ENSJJAG00000022512) #13 Wnt9a (ENSJJAG00000020971) #14 Wnt3a (ENSJJAG00000020598) #15 ENSJJAG00000020245 #16 2310033P09Rik (ENSJJAG00000001888) #17 Mrpl55 (ENSJJAG00000021164) #18 Guk1 (ENSJJAG00000021658) #19 Gjc2 (ENSJJAG00000011405) #20 Iba57 (ENSJJAG00000023432) #21 Obscn (ENSJJAG00000023196) #22 Trim11 (ENSJJAG00000019654) #23 Trim17 (ENSJJAG00000017850) #24 ENSJJAG00000017460 ##25 H2ac25 (ENSJJAG00000004184) #28 H2bc26-ps (ENSJJAG00000003959) #27 ENSJJAG00000011864 #29 Btnl10 (ENSJJAG00000023413) Zfp39 (ENSJJAG00000018925) #31 ENSJJAG00000000550 Fam183b (ENSJJAG00000018849) #36 Or2t44 (ENSJJAG00000018515) #37 ENSJJAG00000003913 Trim58 (ENSJJAG00000016816) Or11l3 (ENSJJAG00000002201) ENSJJAG00000012885 Kangaroo rat MODERN SPECIES 346 ENSDORG00000027626 Nlrp3 (ENSDORG00000010673) #7 Zkscan17 (ENSDORG00000028040) #9 Wnt9a (ENSDORG00000005390) #14 ENSDORG00000027855 #16 Guk1 (ENSDORG00000007614) #19 Obscn (ENSDORG00000016208) #22 Trim11 (ENSDORG00000029829) #23 H2ac25 (ENSDORG00000026130) #28 H2bc26-ps (ENSDORG00000024270) #27 ENSDORG00000005512 Sh3bp5l (ENSDORG00000007183) Fasl (ENSDORG00000011897) Suco (ENSDORG00000011895) Pigc (ENSDORG00000030248) Dnm3 (ENSDORG00000002505) Mettl13 (ENSDORG00000011976) Prrc2c (ENSDORG00000001422) Fmo1 (ENSDORG00000029306) Fmo2 (ENSDORG00000004731) Fmo3 (ENSDORG00000006804) ENSDORG00000003154 Rodentia_A ANCESTRAL SPECIES 31 ENSGT01090000260044.A.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Hystricomorpha ANCESTRAL SPECIES 63 ENSGT01090000260044.A.b.a.a.a.a.a.c ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Naked mole-rat female MODERN SPECIES ENSHGLG00000000671 ENSHGLG00000043542 #7 ENSHGLG00000001102 #9 ENSHGLG00000047340 ##10 JMJD4 (ENSHGLG00000001365) #11 ENSHGLG00000001357 #12 PRSS38 (ENSHGLG00000043627) #13 WNT9A (ENSHGLG00000038418) #14 WNT3A (ENSHGLG00000001502) #15 ARF1 (ENSHGLG00000038119) #16 ENSHGLG00000001640 #17 MRPL55 (ENSHGLG00000048301) #18 GUK1 (ENSHGLG00000000309) #19 GJC2 (ENSHGLG00000033969) #20 IBA57 (ENSHGLG00000002132) #21 OBSCN (ENSHGLG00000047806) #22 TRIM11 (ENSHGLG00000002253) #23 TRIM17 (ENSHGLG00000006970) #24 H3-4 (ENSHGLG00000020558) #25 H2AC25 (ENSHGLG00000037975) #28 H2BC26 (ENSHGLG00000044541) #27 ENSHGLG00000035981 #26 ENSHGLG00000000597 #29 ENSHGLG00000038457 ENSHGLG00000049243 ENSHGLG00000033964 ENSHGLG00000032928 ENSHGLG00000046686 ENSHGLG00000047273 ENSHGLG00000019679 ENSHGLG00000019790 Hystricomorpha_a ANCESTRAL SPECIES 79 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Hystricomorpha_b ANCESTRAL SPECIES 106 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 ENSGT00940000160177 #31 Long-tailed chinchilla MODERN SPECIES 288 OR9H1P (ENSCLAG00000017416) OR2G3 (ENSCLAG00000017414) ENSCLAG00000000375 OR2B11 (ENSCLAG00000017578) NLRP3 (ENSCLAG00000000708) #7 ZNF496 (ENSCLAG00000000579) #9 JMJD4 (ENSCLAG00000000501) #11 SNAP47 (ENSCLAG00000000744) #12 WNT9A (ENSCLAG00000000535) #14 WNT3A (ENSCLAG00000000529) #15 ARF1 (ENSCLAG00000000520) #16 C1orf35 (ENSCLAG00000001077) #17 MRPL55 (ENSCLAG00000000917) #18 GUK1 (ENSCLAG00000000853) #19 IBA57 (ENSCLAG00000000741) #21 ENSCLAG00000000505 #22 TRIM11 (ENSCLAG00000000197) #23 TRIM17 (ENSCLAG00000000538) #24 H2BC26 (ENSCLAG00000017444) #27 ENSCLAG00000017452 #26 RNF187 (ENSCLAG00000001629) #29 ENSCLAG00000001526 #30 ENSCLAG00000001377 Sciuridae ANCESTRAL SPECIES 55 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.b ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Eurasian red squirrel MODERN SPECIES 15 OR2C3 (ENSSVLG00005004659) NLRP3 (ENSSVLG00005004506) #7 JMJD4 (ENSSVLG00005004411) #11 SNAP47 (ENSSVLG00005004391) #12 PRSS38 (ENSSVLG00005004365) #13 WNT9A (ENSSVLG00005004346) #14 WNT3A (ENSSVLG00005004327) #15 ENSSVLG00005004310 #16 C1orf35 (ENSSVLG00005004286) #17 MRPL55 (ENSSVLG00005004258) #18 ENSSVLG00005004242 GUK1 (ENSSVLG00005004220) #19 ENSSVLG00005004192 GJC2 (ENSSVLG00005004174) #20 IBA57 (ENSSVLG00005004163) #21 OBSCN (ENSSVLG00005004022) #22 TRIM11 (ENSSVLG00005003920) #23 TRIM17 (ENSSVLG00005003894) #24 H3-4 (ENSSVLG00005003884) #25 H2AC25 (ENSSVLG00005003875) #28 H2BC26 (ENSSVLG00005003865) #27 ENSSVLG00005003856 #26 RNF187 (ENSSVLG00005003848) #29 ENSSVLG00005003828 ENSSVLG00005003818 ZNF496 (ENSSVLG00005003801) #9 Marmotini ANCESTRAL SPECIES 100 ENSGT01100000263486.a.b.a.a.a.a.a.b.a.a.a.a.a ENSGT01090000260044.A.b.a.a.a.b ENSGT00940000162415 #7 ENSGT00940000161967 #9 ENSGT00940000159380 #11 ENSGT00950000182843.b #12 ENSGT00940000154494.a #13 ENSGT00940000159618 #14 ENSGT00940000160510 #15 ENSGT00950000183080.a.b.a.b.b #16 ENSGT00390000005590 #17 ENSGT00390000010309 #18 ENSGT00940000155815 #19 ENSGT01090000260005.a.a.a.b.a.a.a #20 ENSGT00390000006465 #21 ENSGT00940000154756.A #22 ENSGT00940000160371 #23 ENSGT00940000162155 #24 ENSGT01100000263514.A.e.b #25 ENSGT00940000153092.a.a.c.b #28 ENSGT01100000263474.a.b.b.e.b.a.a #27 ENSGT01100000263474.a.b.b.e.b.a.b #26 ENSGT00390000009510 #29 ENSGT00940000163997 Alpin marmot MODERN SPECIES 56 OR2B11 (ENSMMMG00000017357) NLRP3 (ENSMMMG00000017362) #7 ZNF496 (ENSMMMG00000017364) #9 ENSMMMG00000017372 ENSMMMG00000017378 ##33 JMJD4 (ENSMMMG00000017399) #11 SNAP47 (ENSMMMG00000017415) #12 PRSS38 (ENSMMMG00000017421) #13 WNT9A (ENSMMMG00000017429) #14 WNT3A (ENSMMMG00000017437) #15 ENSMMMG00000017464 #16 MRPL55 (ENSMMMG00000017475) #18 GUK1 (ENSMMMG00000017488) #19 GJC2 (ENSMMMG00000017501) #20 IBA57 (ENSMMMG00000017504) #21 OBSCN (ENSMMMG00000017510) #22 TRIM11 (ENSMMMG00000017547) #23 TRIM17 (ENSMMMG00000017550) #24 H3-4 (ENSMMMG00000017555) #25 H2AC25 (ENSMMMG00000017567) #28 H2BC26 (ENSMMMG00000017570) #27 ENSMMMG00000017596 #26 RNF187 (ENSMMMG00000017598) #29 ENSMMMG00000017603 ENSMMMG00000017616 #31