Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Artiodactyla ANCESTRAL SPECIES 6 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Camelidae ANCESTRAL SPECIES 39 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Arabian camel MODERN SPECIES 3 ACSS3 (ENSCDRG00005008842) #7 LIN7A (ENSCDRG00005009181) #8 MYF5 (ENSCDRG00005009235) #9 MYF6 (ENSCDRG00005009281) #10 PTPRQ (ENSCDRG00005009356) #11 OTOGL (ENSCDRG00005010509) #12 PPP1R12A (ENSCDRG00005012542) #13 PAWR (ENSCDRG00005014596) #14 SYT1 (ENSCDRG00005014660) #15 NAV3 (ENSCDRG00005014880) #16 E2F7 (ENSCDRG00005015968) #17 CSRP2 (ENSCDRG00005016043) #18 ZDHHC17 (ENSCDRG00005016120) #19 OSBPL8 (ENSCDRG00005016392) #20 BBS10 (ENSCDRG00005016659) #21 NAP1L1 (ENSCDRG00005016698) #22 PHLDA1 (ENSCDRG00005016995) #23 ENSCDRG00005017029 #24 ENSCDRG00005017128 #25 ENSCDRG00005017149 #26 ENSCDRG00005017179 #27 GLIPR1L1 (ENSCDRG00005017244) #28 CAPS2 (ENSCDRG00005017344) #29 KCNC2 (ENSCDRG00005017383) #30 ENSCDRG00005017473 #31 ATXN7L3B (ENSCDRG00005017489) #32 TRHDE (ENSCDRG00005017523) #33 TPH2 (ENSCDRG00005017639) #34 TBC1D15 (ENSCDRG00005017700) #35 RAB21 (ENSCDRG00005017792) #36 TMEM19 (ENSCDRG00005017823) #37 Alpaca MODERN SPECIES 725 ENSVPAG00000007294 #18 ZDHHC17 (ENSVPAG00000007293) #19 OSBPL8 (ENSVPAG00000007292) #20 BBS10 (ENSVPAG00000007291) #21 NAP1L1 (ENSVPAG00000007290) #22 Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Cetacea ANCESTRAL SPECIES 8 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000154172.ab.b ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000014572.eb.b ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Blue whale DUPLICATION Blue whale MODERN SPECIES 1 MYF5 (ENSBMSG00010007571) #9 MYF6 (ENSBMSG00010007564) #10 PTPRQ (ENSBMSG00010007468) #11 OTOGL (ENSBMSG00010021255) #12 ENSBMSG00010021208 PPP1R12A (ENSBMSG00010021198) #13 PAWR (ENSBMSG00010021183) #14 SYT1 (ENSBMSG00010021177) #15 ENSBMSG00010021165 NAV3 (ENSBMSG00010021020) #16 E2F7 (ENSBMSG00010020948) #17 CSRP2 (ENSBMSG00010020929) #18 ZDHHC17 (ENSBMSG00010020913) #19 OSBPL8 (ENSBMSG00010020883) #20 BBS10 (ENSBMSG00010020864) #21 NAP1L1 (ENSBMSG00010020766) #22 PHLDA1 (ENSBMSG00010020734) #23 ENSBMSG00010020727 KRR1 (ENSBMSG00010020702) #24 GLIPR1 (ENSBMSG00010020669) #25 GLIPR1L2 (ENSBMSG00010020577) #26 GLIPR1L1 (ENSBMSG00010020548) #28 CAPS2 (ENSBMSG00010020525) #29 KCNC2 (ENSBMSG00010020489) #30 TRHDE (ENSBMSG00010020456) #33 TPH2 (ENSBMSG00010020429) #34 ENSBMSG00010020411 TBC1D15 (ENSBMSG00010020359) #35 RAB21 (ENSBMSG00010020336) #36 TMEM19 (ENSBMSG00010020316) #37 ZFC3H1 (ENSBMSG00010019991) Blue whale MODERN SPECIES 20 PCLO (ENSBMSG00010008015) SEMA3E (ENSBMSG00010007954) SEMA3A (ENSBMSG00010007929) SEMA3D (ENSBMSG00010007900) GRM3 (ENSBMSG00010007877) ELAPOR2 (ENSBMSG00010007850) DMTF1 (ENSBMSG00010007755) TMEM243 (ENSBMSG00010007709) CROT (ENSBMSG00010007691) ABCB4 (ENSBMSG00010007670) ABCB1 (ENSBMSG00010007607) RUNDC3B (ENSBMSG00010007504) SLC25A40 (ENSBMSG00010007467) DBF4 (ENSBMSG00010007457) CCDC126 (ENSBMSG00010007449) ENSBMSG00010007439 #22 ENSBMSG00010007425 ENSBMSG00010007410 IGF2BP3 (ENSBMSG00010007379) MALSU1 (ENSBMSG00010007370) GPNMB (ENSBMSG00010007358) NUP42 (ENSBMSG00010007347) KLHL7 (ENSBMSG00010007329) HYCC1 (ENSBMSG00010007306) ENSBMSG00010007284 IL6 (ENSBMSG00010007260) RAPGEF5 (ENSBMSG00010007194) CDCA7L (ENSBMSG00010007132) DNAH11 (ENSBMSG00010006886) ENSBMSG00010006798 SP4 (ENSBMSG00010006784) Blue whale MODERN SPECIES 15 ZBTB11 (ENSBMSG00010011902) ENSBMSG00010011916 ENSBMSG00010011947 SENP7 (ENSBMSG00010012031) IMPG2 (ENSBMSG00010012464) ABI3BP (ENSBMSG00010012526) TFG (ENSBMSG00010012586) ADGRG7 (ENSBMSG00010012630) TMEM45A (ENSBMSG00010012681) LNP1 (ENSBMSG00010012698) TOMM70 (ENSBMSG00010012722) NIT2 (ENSBMSG00010012746) TBC1D23 (ENSBMSG00010012780) ENSBMSG00010012839 CMSS1 (ENSBMSG00010012868) ENSBMSG00010012904 #22 FILIP1L (ENSBMSG00010012915) COL8A1 (ENSBMSG00010012935) DCBLD2 (ENSBMSG00010012956) ST3GAL6 (ENSBMSG00010013016) CPOX (ENSBMSG00010013060) GPR15 (ENSBMSG00010013083) ENSBMSG00010013098 ENSBMSG00010013130 ENSBMSG00010013142 ENSBMSG00010013151 ENSBMSG00010013162 ENSBMSG00010013178 OR5AC2 (ENSBMSG00010013206) GABRR3 (ENSBMSG00010013229) RIOX2 (ENSBMSG00010013267) Odontoceti ANCESTRAL SPECIES 7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000154172.ab.b ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000014572.eb.b ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 17 MYF6 (ENSPCTG00005016374) #10 PTPRQ (ENSPCTG00005015293) #11 OTOGL (ENSPCTG00005013033) #12 ENSPCTG00005012953 PPP1R12A (ENSPCTG00005012575) #13 PAWR (ENSPCTG00005012474) #14 SYT1 (ENSPCTG00005012311) #15 NAV3 (ENSPCTG00005010415) #16 E2F7 (ENSPCTG00005009995) #17 CSRP2 (ENSPCTG00005009938) #18 ZDHHC17 (ENSPCTG00005009874) #19 OSBPL8 (ENSPCTG00005009709) #20 BBS10 (ENSPCTG00005009666) #21 ENSPCTG00005009647 ENSPCTG00005009623 NAP1L1 (ENSPCTG00005009406) #22 PHLDA1 (ENSPCTG00005009371) #23 ENSPCTG00005009342 KRR1 (ENSPCTG00005009253) #24 GLIPR1 (ENSPCTG00005009154) #25 GLIPR1L2 (ENSPCTG00005008930) #26 GLIPR1L1 (ENSPCTG00005008822) #28 CAPS2 (ENSPCTG00005008725) #29 KCNC2 (ENSPCTG00005008582) #30 ATXN7L3B (ENSPCTG00005008533) #32 ENSPCTG00005008488 ENSPCTG00005008475 TRHDE (ENSPCTG00005008394) #33 TPH2 (ENSPCTG00005008326) #34 TBC1D15 (ENSPCTG00005008091) #35 ENSPCTG00005008056 Sperm whale MODERN SPECIES 16 SEMA3E (ENSPCTG00005004045) SEMA3A (ENSPCTG00005004017) SEMA3D (ENSPCTG00005003987) GRM3 (ENSPCTG00005003962) KIAA1324L (ENSPCTG00005003874) DMTF1 (ENSPCTG00005003809) TMEM243 (ENSPCTG00005003771) CROT (ENSPCTG00005003742) ABCB4 (ENSPCTG00005003687) ABCB1 (ENSPCTG00005003552) ENSPCTG00005003512 RUNDC3B (ENSPCTG00005003383) SLC25A40 (ENSPCTG00005003323) DBF4 (ENSPCTG00005003288) CCDC126 (ENSPCTG00005003268) ENSPCTG00005003253 #22 ENSPCTG00005003240 TRA2A (ENSPCTG00005003229) IGF2BP3 (ENSPCTG00005003193) MALSU1 (ENSPCTG00005003177) ENSPCTG00005003167 GPNMB (ENSPCTG00005003153) NUPL2 (ENSPCTG00005003130) KLHL7 (ENSPCTG00005003098) FAM126A (ENSPCTG00005003061) ENSPCTG00005003031 IL6 (ENSPCTG00005003017) RAPGEF5 (ENSPCTG00005002875) CDCA7L (ENSPCTG00005002828) DNAH11 (ENSPCTG00005002062) ENSPCTG00005001827 Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000154172.ab.b ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000014572.eb.b ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Dolphin MODERN SPECIES 3867 NAP1L1 (ENSTTRG00000017062) #22 PHLDA1 (ENSTTRG00000017061) Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000154172.ab.b ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000014572.eb.b ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Vaquita DUPLICATION Vaquita MODERN SPECIES 17 ENSPSNG00000014013 PTPN3 (ENSPSNG00000014076) EPB41L4B (ENSPSNG00000014333) ENSPSNG00000014959 ENSPSNG00000015018 FRRS1L (ENSPSNG00000015057) TMEM245 (ENSPSNG00000015113) CTNNAL1 (ENSPSNG00000015319) ENSPSNG00000015464 ENSPSNG00000015561 ENSPSNG00000015579 ENSPSNG00000015628 ENSPSNG00000015717 ENSPSNG00000015757 ACTL7B (ENSPSNG00000015822) ENSPSNG00000015847 #22 ENSPSNG00000015883 KLF4 (ENSPSNG00000006134) RAD23B (ENSPSNG00000006231) ENSPSNG00000006277 ZNF462 (ENSPSNG00000006317) ENSPSNG00000006389 ENSPSNG00000006434 TMEM38B (ENSPSNG00000006475) ENSPSNG00000006506 FKTN (ENSPSNG00000006535) ENSPSNG00000006583 FSD1L (ENSPSNG00000006672) SLC44A1 (ENSPSNG00000006764) ENSPSNG00000006827 ABCA1 (ENSPSNG00000006908) Vaquita MODERN SPECIES 17 ENSPSNG00000020509 PLGRKT (ENSPSNG00000020541) ENSPSNG00000020589 RIC1 (ENSPSNG00000020684) ERMP1 (ENSPSNG00000020793) MLANA (ENSPSNG00000020843) KIAA2026 (ENSPSNG00000020897) RANBP6 (ENSPSNG00000020980) IL33 (ENSPSNG00000021022) TPD52L3 (ENSPSNG00000021045) UHRF2 (ENSPSNG00000021087) GLDC (ENSPSNG00000021229) KDM4C (ENSPSNG00000021418) DMAC1 (ENSPSNG00000021465) PTPRD (ENSPSNG00000021753) ENSPSNG00000022254 #22 ENSPSNG00000022260 TYRP1 (ENSPSNG00000022265) LURAP1L (ENSPSNG00000022271) MPDZ (ENSPSNG00000022311) NFIB (ENSPSNG00000022385) ZDHHC21 (ENSPSNG00000022435) CER1 (ENSPSNG00000022441) FREM1 (ENSPSNG00000022456) ENSPSNG00000022475 TTC39B (ENSPSNG00000022479) SNAPC3 (ENSPSNG00000022494) ENSPSNG00000022504 CCDC171 (ENSPSNG00000022518) BNC2 (ENSPSNG00000022532) CNTLN (ENSPSNG00000022536) Vaquita MODERN SPECIES 1 PTPRQ (ENSPSNG00000006652) #11 OTOGL (ENSPSNG00000007188) #12 PPP1R12A (ENSPSNG00000008207) #13 ENSPSNG00000008403 PAWR (ENSPSNG00000008439) #14 SYT1 (ENSPSNG00000008513) #15 ENSPSNG00000008562 NAV3 (ENSPSNG00000009074) #16 E2F7 (ENSPSNG00000010547) #17 CSRP2 (ENSPSNG00000010823) #18 ZDHHC17 (ENSPSNG00000010872) #19 ENSPSNG00000010920 ENSPSNG00000010941 OSBPL8 (ENSPSNG00000010975) #20 BBS10 (ENSPSNG00000011255) #21 ENSPSNG00000011336 #22 ENSPSNG00000011534 ENSPSNG00000011566 KRR1 (ENSPSNG00000011619) #24 GLIPR1 (ENSPSNG00000011694) #25 ENSPSNG00000011741 #26 ENSPSNG00000011783 #29 KCNC2 (ENSPSNG00000011897) #30 ENSPSNG00000012078 TRHDE (ENSPSNG00000012118) #33 TBC1D15 (ENSPSNG00000012340) #35 RAB21 (ENSPSNG00000012506) #36 TMEM19 (ENSPSNG00000012528) #37 THAP2 (ENSPSNG00000012584) ZFC3H1 (ENSPSNG00000012685) LGR5 (ENSPSNG00000012776) Monodontidae ANCESTRAL SPECIES 6 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000154172.ab.b ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00940000154980.bb.a ##18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000014572.eb.b ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 ENSGT00940000160214 Narwhal DUPLICATION Narwhal MODERN SPECIES 313 MYF6 (ENSMMNG00015019715) #10 PTPRQ (ENSMMNG00015019359) #11 OTOGL (ENSMMNG00015018567) #12 ENSMMNG00015018420 PPP1R12A (ENSMMNG00015018194) #13 ENSMMNG00015018085 PAWR (ENSMMNG00015018035) #14 SYT1 (ENSMMNG00015017994) #15 NAV3 (ENSMMNG00015017728) #16 E2F7 (ENSMMNG00015017553) #17 CSRP2 (ENSMMNG00015017494) #18 ENSMMNG00015017474 ZDHHC17 (ENSMMNG00015017285) #19 OSBPL8 (ENSMMNG00015017163) #20 BBS10 (ENSMMNG00015017120) #21 NAP1L1 (ENSMMNG00015016626) #22 PHLDA1 (ENSMMNG00015016497) #23 ENSMMNG00015016472 KRR1 (ENSMMNG00015016424) #24 GLIPR1 (ENSMMNG00015016368) #25 GLIPR1L2 (ENSMMNG00015016289) #26 KCNC2 (ENSMMNG00015016164) #30 ATXN7L3B (ENSMMNG00015016119) #32 ENSMMNG00015016102 TRHDE (ENSMMNG00015016061) #33 TPH2 (ENSMMNG00015016006) #34 TBC1D15 (ENSMMNG00015015845) #35 RAB21 (ENSMMNG00015021878) #36 TMEM19 (ENSMMNG00015021870) #37 THAP2 (ENSMMNG00015021865) ZFC3H1 (ENSMMNG00015021858) Narwhal MODERN SPECIES 312 PLGRKT (ENSMMNG00015020757) CD274 (ENSMMNG00015020739) PDCD1LG2 (ENSMMNG00015020694) RIC1 (ENSMMNG00015020565) ERMP1 (ENSMMNG00015020481) MLANA (ENSMMNG00015020456) KIAA2026 (ENSMMNG00015020402) ENSMMNG00015020366 IL33 (ENSMMNG00015020337) TPD52L3 (ENSMMNG00015020325) UHRF2 (ENSMMNG00015020267) GLDC (ENSMMNG00015020203) KDM4C (ENSMMNG00015020148) ENSMMNG00015020117 PTPRD (ENSMMNG00015019797) ENSMMNG00015019678 #22 ENSMMNG00015019665 TYRP1 (ENSMMNG00015019643) LURAP1L (ENSMMNG00015019625) MPDZ (ENSMMNG00015019518) NFIB (ENSMMNG00015018858) ZDHHC21 (ENSMMNG00015018625) CER1 (ENSMMNG00015018604) FREM1 (ENSMMNG00015018425) TTC39B (ENSMMNG00015017960) SNAPC3 (ENSMMNG00015017842) ENSMMNG00015017788 CCDC171 (ENSMMNG00015017724) BNC2 (ENSMMNG00015017606) CNTLN (ENSMMNG00015017488) SH3GL2 (ENSMMNG00015017433) Narwhal MODERN SPECIES 306 ENSMMNG00015008950 SEMA3A (ENSMMNG00015008960) SEMA3D (ENSMMNG00015008990) GRM3 (ENSMMNG00015009031) ELAPOR2 (ENSMMNG00015009063) DMTF1 (ENSMMNG00015009124) TMEM243 (ENSMMNG00015009191) CROT (ENSMMNG00015009220) ABCB4 (ENSMMNG00015009645) ABCB1 (ENSMMNG00015011895) ENSMMNG00015013462 RUNDC3B (ENSMMNG00015013486) SLC25A40 (ENSMMNG00015013512) DBF4 (ENSMMNG00015013532) CCDC126 (ENSMMNG00015013548) ENSMMNG00015013557 #22 ENSMMNG00015013578 ENSMMNG00015013599 IGF2BP3 (ENSMMNG00015013611) MALSU1 (ENSMMNG00015013639) GPNMB (ENSMMNG00015013654) NUP42 (ENSMMNG00015013671) KLHL7 (ENSMMNG00015013694) HYCC1 (ENSMMNG00015013717) ENSMMNG00015013758 IL6 (ENSMMNG00015013785) RAPGEF5 (ENSMMNG00015013835) CDCA7L (ENSMMNG00015013916) DNAH11 (ENSMMNG00015014124) SP4 (ENSMMNG00015014456) ENSMMNG00015014468 Beluga whale DUPLICATION Beluga whale MODERN SPECIES 50 CD274 (ENSDLEG00000019715) PDCD1LG2 (ENSDLEG00000019719) RIC1 (ENSDLEG00000019725) ERMP1 (ENSDLEG00000019731) MLANA (ENSDLEG00000019742) KIAA2026 (ENSDLEG00000019748) RANBP6 (ENSDLEG00000019757) IL33 (ENSDLEG00000019759) TPD52L3 (ENSDLEG00000019764) UHRF2 (ENSDLEG00000019777) GLDC (ENSDLEG00000019814) KDM4C (ENSDLEG00000014058) ENSDLEG00000014119 ENSDLEG00000014144 PTPRD (ENSDLEG00000014171) ENSDLEG00000014285 #22 TYRP1 (ENSDLEG00000014303) LURAP1L (ENSDLEG00000014337) MPDZ (ENSDLEG00000014917) NFIB (ENSDLEG00000020159) ZDHHC21 (ENSDLEG00000020168) CER1 (ENSDLEG00000020173) FREM1 (ENSDLEG00000020177) TTC39B (ENSDLEG00000020187) SNAPC3 (ENSDLEG00000020200) ENSDLEG00000020201 ENSDLEG00000020205 CCDC171 (ENSDLEG00000020209) ENSDLEG00000020244 BNC2 (ENSDLEG00000020245) CNTLN (ENSDLEG00000020249) Beluga whale MODERN SPECIES 72 GRM3 (ENSDLEG00000021232) KIAA1324L (ENSDLEG00000021230) DMTF1 (ENSDLEG00000021214) TMEM243 (ENSDLEG00000021203) CROT (ENSDLEG00000021200) ABCB4 (ENSDLEG00000020916) ABCB1 (ENSDLEG00000016643) ENSDLEG00000016122 RUNDC3B (ENSDLEG00000016083) SLC25A40 (ENSDLEG00000016041) DBF4 (ENSDLEG00000015923) CCDC126 (ENSDLEG00000015911) ENSDLEG00000021741 #22 ENSDLEG00000021739 ENSDLEG00000021737 IGF2BP3 (ENSDLEG00000021731) MALSU1 (ENSDLEG00000021728) GPNMB (ENSDLEG00000021726) KLHL7 (ENSDLEG00000021717) FAM126A (ENSDLEG00000021707) ENSDLEG00000021700 IL6 (ENSDLEG00000021697) RAPGEF5 (ENSDLEG00000021689) CDCA7L (ENSDLEG00000021687) DNAH11 (ENSDLEG00000021082) ENSDLEG00000020902 SP4 (ENSDLEG00000020894) ENSDLEG00000020889 Beluga whale MODERN SPECIES 39 PTPRQ (ENSDLEG00000006066) #11 OTOGL (ENSDLEG00000006234) #12 PPP1R12A (ENSDLEG00000006433) #13 ENSDLEG00000006442 PAWR (ENSDLEG00000006445) #14 ENSDLEG00000006452 SYT1 (ENSDLEG00000006456) #15 NAV3 (ENSDLEG00000006608) #16 ENSDLEG00000007322 #17 ENSDLEG00000007329 #17 CSRP2 (ENSDLEG00000007353) ##18 ZDHHC17 (ENSDLEG00000007362) #19 ENSDLEG00000007371 OSBPL8 (ENSDLEG00000007401) #20 BBS10 (ENSDLEG00000007426) #21 ENSDLEG00000007438 #22 PHLDA1 (ENSDLEG00000007521) #23 ENSDLEG00000007528 KRR1 (ENSDLEG00000007544) #24 GLIPR1 (ENSDLEG00000007560) #25 GLIPR1L2 (ENSDLEG00000000224) #26 KCNC2 (ENSDLEG00000000278) #30 ATXN7L3B (ENSDLEG00000000389) #32 ENSDLEG00000000403 TRHDE (ENSDLEG00000000423) #33 TPH2 (ENSDLEG00000000459) #34 TBC1D15 (ENSDLEG00000000511) #35 RAB21 (ENSDLEG00000000571) #36 TMEM19 (ENSDLEG00000000605) #37 THAP2 (ENSDLEG00000000632) ZFC3H1 (ENSDLEG00000000767) Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT00940000153362.a.bb.a #22 Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 22 MYF6 (ENSCHYG00000017934) #10 PTPRQ (ENSCHYG00000015685) #11 OTOGL (ENSCHYG00000013254) #12 PPP1R12A (ENSCHYG00000011940) #13 ENSCHYG00000011841 PAWR (ENSCHYG00000011616) #14 SYT1 (ENSCHYG00000011518) #15 ENSCHYG00000011512 NAV3 (ENSCHYG00000010069) #16 ENSCHYG00000009932 E2F7 (ENSCHYG00000009596) #17 ENSCHYG00000009520 CSRP2 (ENSCHYG00000009422) #18 ZDHHC17 (ENSCHYG00000009052) #19 OSBPL8 (ENSCHYG00000008637) #20 ENSCHYG00000008327 #22 PHLDA1 (ENSCHYG00000008287) #23 KRR1 (ENSCHYG00000008210) #24 GLIPR1 (ENSCHYG00000008170) #25 GLIPR1L2 (ENSCHYG00000008064) #26 GLIPR1L1 (ENSCHYG00000008035) #28 CAPS2 (ENSCHYG00000007943) #29 KCNC2 (ENSCHYG00000007653) #30 ATXN7L3B (ENSCHYG00000007602) #32 ENSCHYG00000007590 TRHDE (ENSCHYG00000007528) #33 TPH2 (ENSCHYG00000007450) #34 TBC1D15 (ENSCHYG00000007317) #35 RAB21 (ENSCHYG00000007294) #36 TMEM19 (ENSCHYG00000007214) #37 ZFC3H1 (ENSCHYG00000006953) Yarkand deer MODERN SPECIES 10 NDUFB5 (ENSCHYG00000019479) USP13 (ENSCHYG00000018967) PEX5L (ENSCHYG00000017068) ENSCHYG00000016977 TTC14 (ENSCHYG00000016786) CCDC39 (ENSCHYG00000016666) FXR1 (ENSCHYG00000015742) DNAJC19 (ENSCHYG00000015489) ATP11B (ENSCHYG00000013977) ENSCHYG00000013883 DCUN1D1 (ENSCHYG00000013798) ENSCHYG00000013773 MCCC1 (ENSCHYG00000013336) LAMP3 (ENSCHYG00000013102) MCF2L2 (ENSCHYG00000013028) ENSCHYG00000012973 #22 ENSCHYG00000012825 KLHL24 (ENSCHYG00000012697) ENSCHYG00000012636 YEATS2 (ENSCHYG00000011810) PARL (ENSCHYG00000011557) ABCC5 (ENSCHYG00000011061) ENSCHYG00000010955 ENSCHYG00000010728 HTR3E (ENSCHYG00000010491) EIF2B5 (ENSCHYG00000010374) DVL3 (ENSCHYG00000010004) ENSCHYG00000009683 ABCF3 (ENSCHYG00000009398) VWA5B2 (ENSCHYG00000009135) ALG3 (ENSCHYG00000009074) Percora_a ANCESTRAL SPECIES ENSGT00940000153362.a.bb.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.a #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.a #22 Goat MODERN SPECIES 22 REG4 (ENSCHIG00000015183) HMGCS2 (ENSCHIG00000025654) PHGDH (ENSCHIG00000018423) ZNF697 (ENSCHIG00000014100) 3BHSD (ENSCHIG00000020217) HAO2 (ENSCHIG00000026466) WARS2 (ENSCHIG00000013499) TBX15 (ENSCHIG00000014427) ENSCHIG00000014484 SPAG17 (ENSCHIG00000014664) WDR3 (ENSCHIG00000010490) GDAP2 (ENSCHIG00000019563) TENT5C (ENSCHIG00000005579) MAN1A2 (ENSCHIG00000013056) VTCN1 (ENSCHIG00000019630) ENSCHIG00000007372 #22 TRIM45 (ENSCHIG00000018385) TTF2 (ENSCHIG00000020785) CD101 (ENSCHIG00000025123) PTGFRN (ENSCHIG00000017906) CD2 (ENSCHIG00000023355) IGSF3 (ENSCHIG00000003902) ENSCHIG00000022779 ATP1A1 (ENSCHIG00000017191) ENSCHIG00000005925 MAB21L3 (ENSCHIG00000019025) SLC22A15 (ENSCHIG00000022810) ENSCHIG00000008508 NHLH2 (ENSCHIG00000007315) ENSCHIG00000017520 CASQ2 (ENSCHIG00000014376) Siberian musk deer MODERN SPECIES 161 ENSMMSG00000008018 E2F7 (ENSMMSG00000007800) #17 ENSMMSG00000007753 #18 ZDHHC17 (ENSMMSG00000007709) #19 OSBPL8 (ENSMMSG00000007416) #20 ENSMMSG00000007025 #22 PHLDA1 (ENSMMSG00000006968) #23 ENSMMSG00000006950 KRR1 (ENSMMSG00000006803) #24 GLIPR1 (ENSMMSG00000006761) #25 GLIPR1L2 (ENSMMSG00000006598) #26 GLIPR1L1 (ENSMMSG00000006495) #28 CAPS2 (ENSMMSG00000006455) #29 KCNC2 (ENSMMSG00000006316) #30 ATXN7L3B (ENSMMSG00000006291) #32 ENSMMSG00000006282 Pecora ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b #22 Percora_a DUPLICATION Percora_a ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Goat DUPLICATION Goat MODERN SPECIES ENSCHIG00000023045 ENSCHIG00000012604 KRTAP27-1 (ENSCHIG00000023347) KRTAP24-1 (ENSCHIG00000010288) CLDN8 (ENSCHIG00000026887) CLDN17 (ENSCHIG00000008873) GRIK1 (ENSCHIG00000016810) BACH1 (ENSCHIG00000019566) MAP3K7CL (ENSCHIG00000012652) ENSCHIG00000016193 CCT8 (ENSCHIG00000017860) USP16 (ENSCHIG00000025641) RWDD2B (ENSCHIG00000018379) LTN1 (ENSCHIG00000017704) N6AMT1 (ENSCHIG00000016325) ENSCHIG00000024574 #22 ADAMTS5 (ENSCHIG00000018986) ADAMTS1 (ENSCHIG00000006622) CYYR1 (ENSCHIG00000025461) APP (ENSCHIG00000026432) GABPA (ENSCHIG00000012998) ENSCHIG00000022046 JAM2 (ENSCHIG00000015291) MRPL39 (ENSCHIG00000018095) ENSCHIG00000021256 NCAM2 (ENSCHIG00000016827) TMPRSS15 (ENSCHIG00000012944) CHODL (ENSCHIG00000024133) C21orf91 (ENSCHIG00000010676) BTG3 (ENSCHIG00000008206) CXADR (ENSCHIG00000022557) Goat MODERN SPECIES 11 FSIP2 (ENSCHIG00000016003) ZNF804A (ENSCHIG00000013519) ENSCHIG00000010879 NUP35 (ENSCHIG00000023148) DUSP19 (ENSCHIG00000011127) NCKAP1 (ENSCHIG00000009748) FRZB (ENSCHIG00000021563) DNAJC10 (ENSCHIG00000003443) PDE1A (ENSCHIG00000024041) ENSCHIG00000012129 PPP1R1C (ENSCHIG00000022279) ITPRID2 (ENSCHIG00000012758) NEUROD1 (ENSCHIG00000013471) CERKL (ENSCHIG00000025973) ITGA4 (ENSCHIG00000019338) ENSCHIG00000023381 #22 UBE2E3 (ENSCHIG00000009564) CWC22 (ENSCHIG00000017150) ZNF385B (ENSCHIG00000024559) SESTD1 (ENSCHIG00000018999) ENSCHIG00000016292 ENSCHIG00000016308 ENSCHIG00000027063 ENSCHIG00000018472 PLEKHA3 (ENSCHIG00000019515) FKBP7 (ENSCHIG00000017480) PJVK (ENSCHIG00000013011) PRKRA (ENSCHIG00000015333) OSBPL6 (ENSCHIG00000008898) ENSCHIG00000017164 RBM45 (ENSCHIG00000010687) Bovinae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Bos ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Bos_b ANCESTRAL SPECIES 4 ENSGT00940000153431.b ENSGT00950000183210.d.a.c.a.a.b.f.a.b ENSGT00940000154327.b.e.b ENSGT01030000234532.A.a.a.b ENSGT00390000001138.a.g.b ENSGT00940000154866.B.d ENSGT00550000075046 ENSGT00550000074931 ENSGT00390000004987 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000153362.a.bb.b.a #22 ENSGT00940000159137.d ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b ENSGT00900000141212 ENSGT00910000144356 ENSGT00940000162636.B ENSGT00940000165454 ENSGT00940000162294 ENSGT00940000163249 ENSGT00940000161877.j ENSGT00940000154755 Hybrid Bos Indicus MODERN SPECIES 4 SMIM26 (ENSBIXG00005000771) ENSBIXG00005010061 DTD1 (ENSBIXG00005010081) SCP2D1 (ENSBIXG00005000779) SLC24A3 (ENSBIXG00005010121) ENSBIXG00005010143 RIN2 (ENSBIXG00005010179) NAA20 (ENSBIXG00005010224) CRNKL1 (ENSBIXG00005010247) CFAP61 (ENSBIXG00005010280) INSM1 (ENSBIXG00005010299) RALGAPA2 (ENSBIXG00005010322) ENSBIXG00005010385 XRN2 (ENSBIXG00005006105) ENSBIXG00005000714 ENSBIXG00005000694 #22 PAX1 (ENSBIXG00005010606) FOXA2 (ENSBIXG00005000913) THBD (ENSBIXG00005010640) ENSBIXG00005000916 CD93 (ENSBIXG00005010666) NXT1 (ENSBIXG00005010690) GZF1 (ENSBIXG00005010698) NAPB (ENSBIXG00005000942) ENSBIXG00005000943 ENSBIXG00005010800 ENSBIXG00005000950 ENSBIXG00005010816 CST8 (ENSBIXG00005006779) ENSBIXG00005000954 ENSBIXG00005010849 Cow MODERN SPECIES 4 SMIM26 (ENSBTAG00000051249) DTD1 (ENSBTAG00000008964) ENSBTAG00000012276 SCP2D1 (ENSBTAG00000005202) SLC24A3 (ENSBTAG00000011882) ENSBTAG00000032893 RIN2 (ENSBTAG00000020382) NAA20 (ENSBTAG00000001144) CRNKL1 (ENSBTAG00000008472) CFAP61 (ENSBTAG00000009291) RALGAPA2 (ENSBTAG00000014178) KIZ (ENSBTAG00000020988) XRN2 (ENSBTAG00000011304) NKX2-4 (ENSBTAG00000011312) NKX2-2 (ENSBTAG00000010277) ENSBTAG00000035643 #22 PAX1 (ENSBTAG00000006742) FOXA2 (ENSBTAG00000012407) THBD (ENSBTAG00000048591) CD93 (ENSBTAG00000004207) NXT1 (ENSBTAG00000004993) GZF1 (ENSBTAG00000008908) NAPB (ENSBTAG00000032704) ENSBTAG00000027420 MGC133636 (ENSBTAG00000013416) CST8 (ENSBTAG00000032694) ENSBTAG00000015949 ENSBTAG00000032687 CST3 (ENSBTAG00000000598) SYNDIG1 (ENSBTAG00000040147) CST7 (ENSBTAG00000004273) Bos_a ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.a #22 Domestic yak MODERN SPECIES 3 DTD1 (ENSBGRG00000005731) ENSBGRG00000005768 SLC24A3 (ENSBGRG00000005785) ENSBGRG00000005832 ENSBGRG00000005870 NAA20 (ENSBGRG00000005893) CRNKL1 (ENSBGRG00000006006) CFAP61 (ENSBGRG00000006111) INSM1 (ENSBGRG00000006219) ENSBGRG00000006247 ENSBGRG00000006333 KIZ (ENSBGRG00000006486) XRN2 (ENSBGRG00000006633) NKX2-4 (ENSBGRG00000006760) NKX2-2 (ENSBGRG00000006790) ENSBGRG00000006808 #22 ENSBGRG00000006824 PAX1 (ENSBGRG00000006855) FOXA2 (ENSBGRG00000006927) THBD (ENSBGRG00000006963) CD93 (ENSBGRG00000006986) ENSBGRG00000007043 NXT1 (ENSBGRG00000007076) ENSBGRG00000007097 ENSBGRG00000007150 NAPB (ENSBGRG00000007201) CSTL1 (ENSBGRG00000007456) ENSBGRG00000007520 ENSBGRG00000007612 ENSBGRG00000007655 CST8 (ENSBGRG00000007704) Siberian musk deer MODERN SPECIES 58 AHI1 (ENSMMSG00000021831) MYB (ENSMMSG00000021565) HBS1L (ENSMMSG00000021341) ALDH8A1 (ENSMMSG00000021125) ENSMMSG00000021091 SGK1 (ENSMMSG00000020868) SLC2A12 (ENSMMSG00000020794) TBPL1 (ENSMMSG00000020735) TCF21 (ENSMMSG00000020711) ENSMMSG00000020638 #22 ENSMMSG00000020624 EYA4 (ENSMMSG00000019255) RPS12 (ENSMMSG00000019108) SLC18B1 (ENSMMSG00000019044) VNN2 (ENSMMSG00000018976) VNN1 (ENSMMSG00000018799) TAAR1 (ENSMMSG00000018786) TAAR2 (ENSMMSG00000018770) ENSMMSG00000018760 ENSMMSG00000018755 TAAR5 (ENSMMSG00000018747) ENSMMSG00000018696 ENSMMSG00000018682 ENSMMSG00000018595 ENSMMSG00000018569 Percora_a ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Caprinae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Goat MODERN SPECIES 3 AKAP11 (ENSCHIG00000013636) DGKH (ENSCHIG00000006200) VWA8 (ENSCHIG00000014923) RGCC (ENSCHIG00000021125) NAA16 (ENSCHIG00000020957) MTRF1 (ENSCHIG00000011810) KBTBD7 (ENSCHIG00000008970) KBTBD6 (ENSCHIG00000008480) WBP4 (ENSCHIG00000013146) ELF1 (ENSCHIG00000022154) SUGT1 (ENSCHIG00000016538) CNMD (ENSCHIG00000011842) ENSCHIG00000018869 PCDH8 (ENSCHIG00000007364) OLFM4 (ENSCHIG00000012620) ENSCHIG00000017455 #22 ENSCHIG00000020046 ENSCHIG00000007273 PCDH17 (ENSCHIG00000011906) ENSCHIG00000018989 ENSCHIG00000021621 DIAPH3 (ENSCHIG00000020803) ENSCHIG00000020620 ENSCHIG00000004079 TDRD3 (ENSCHIG00000020019) ENSCHIG00000021721 PCDH20 (ENSCHIG00000004923) Bovinae ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Bos ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Bos_b ANCESTRAL SPECIES ENSGT00940000153362.a.bb.b.b #22 Cow MODERN SPECIES 6 PPFIBP2 (ENSBTAG00000016140) OLFML1 (ENSBTAG00000021483) SYT9 (ENSBTAG00000032079) RBMXL2 (ENSBTAG00000047652) NLRP14 (ENSBTAG00000002289) ZNF214 (ENSBTAG00000020289) ZNF215 (ENSBTAG00000003638) OR2D3 (ENSBTAG00000054848) OR2D2 (ENSBTAG00000018490) OR10A4 (ENSBTAG00000052067) OR10A5 (ENSBTAG00000049124) OR10A5L (ENSBTAG00000052456) OR10A5G (ENSBTAG00000050050) OR6A2 (ENSBTAG00000019144) OR6B18 (ENSBTAG00000051921) ENSBTAG00000027525 #22 OR6B17 (ENSBTAG00000049727) ENSBTAG00000037603 OR2D4 (ENSBTAG00000036031) OR2D3G (ENSBTAG00000055066) OR2AG1E (ENSBTAG00000035675) OR2AG1G (ENSBTAG00000054851) OR2AG1 (ENSBTAG00000054261) OR2AG2 (ENSBTAG00000047025) OR2D37 (ENSBTAG00000021147) ENSBTAG00000051394 ENSBTAG00000037937 ENSBTAG00000049294 ENSBTAG00000052878 MRPL17 (ENSBTAG00000024781) DCHS1 (ENSBTAG00000015405) Yarkand deer MODERN SPECIES 28 PGRMC2 (ENSCHYG00000003351) JADE1 (ENSCHYG00000003379) SCLT1 (ENSCHYG00000003454) C4orf33 (ENSCHYG00000003546) ENSCHYG00000003561 ENSCHYG00000003572 PCDH10 (ENSCHYG00000003589) ENSCHYG00000003606 PABPC4L (ENSCHYG00000003623) ENSCHYG00000003641 ENSCHYG00000003650 ENSCHYG00000003660 PCDH18 (ENSCHYG00000003685) ENSCHYG00000003723 SLC7A11 (ENSCHYG00000003749) ENSCHYG00000003775 #22 ENSCHYG00000003782 NOCT (ENSCHYG00000003790) ELF2 (ENSCHYG00000003820) ENSCHYG00000003881 ENSCHYG00000003891 ENSCHYG00000003904 NAA15 (ENSCHYG00000003925) RAB33B (ENSCHYG00000003973) SETD7 (ENSCHYG00000003984) ENSCHYG00000004005 MGST2 (ENSCHYG00000000058) MAML3 (ENSCHYG00000000075) ENSCHYG00000000146 CLGN (ENSCHYG00000000178) MGAT4D (ENSCHYG00000000222) Pecora ANCESTRAL SPECIES 3 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Yarkand deer MODERN SPECIES 9 ENSCHYG00000025207 FAM180A (ENSCHYG00000025190) SLC13A4 (ENSCHYG00000025174) STMP1 (ENSCHYG00000025155) NUP205 (ENSCHYG00000025018) CNOT4 (ENSCHYG00000024863) ENSCHYG00000024840 ENSCHYG00000024804 STRA8 (ENSCHYG00000024771) WDR91 (ENSCHYG00000024656) CYREN (ENSCHYG00000024621) TMEM140 (ENSCHYG00000024615) AGBL3 (ENSCHYG00000024562) CALD1 (ENSCHYG00000024195) BPGM (ENSCHYG00000024151) ENSCHYG00000024119 #22 ENSCHYG00000024043 ENSCHYG00000024001 SLC35B4 (ENSCHYG00000023964) LRGUK (ENSCHYG00000023792) EXOC4 (ENSCHYG00000023677) CHCHD3 (ENSCHYG00000023548) PLXNA4 (ENSCHYG00000023427) ENSCHYG00000023404 ENSCHYG00000023373 MKLN1 (ENSCHYG00000023221) ENSCHYG00000023197 ENSCHYG00000023181 KLF14 (ENSCHYG00000023121) TSGA13 (ENSCHYG00000023089) COPG2 (ENSCHYG00000022977) Percora_a ANCESTRAL SPECIES 3 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Siberian musk deer MODERN SPECIES 198 CLGN (ENSMMSG00000001862) SCOC (ENSMMSG00000001826) MAML3 (ENSMMSG00000001791) ENSMMSG00000001780 MGST2 (ENSMMSG00000001761) SETD7 (ENSMMSG00000001737) RAB33B (ENSMMSG00000001721) NAA15 (ENSMMSG00000001555) ENSMMSG00000001503 MGARP (ENSMMSG00000001480) ELF2 (ENSMMSG00000001389) NOCT (ENSMMSG00000001359) ENSMMSG00000001349 SLC7A11 (ENSMMSG00000001334) PCDH18 (ENSMMSG00000001298) ENSMMSG00000001278 #22 ENSMMSG00000001260 ENSMMSG00000001248 PABPC4L (ENSMMSG00000001234) PCDH10 (ENSMMSG00000001214) Bovidae DUPLICATION Bovidae DUPLICATION Bovidae DUPLICATION Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.a #22 Bovinae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.a #22 Bos ANCESTRAL SPECIES 15 ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a #22 ENSGT00950000183183.b.a.q.a.c.b.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00960000190398 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Bos_b ANCESTRAL SPECIES 14 ENSGT00530000064550.A ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.b.b.b.b.a.b.a.a.b.a.a.a ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000001063 ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a #22 ENSGT00950000183183.b.a.q.a.c.b.a ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00960000190398 ENSGT00940000162645 ENSGT00390000016927.i.a.a.b ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 Hybrid Bos Indicus MODERN SPECIES 25 ATOH1 (ENSBIXG00005019073) SMARCAD1 (ENSBIXG00005019129) HPGDS (ENSBIXG00005019143) PDLIM5 (ENSBIXG00005019427) ENSBIXG00005019501 ENSBIXG00005019512 BMPR1B (ENSBIXG00005019716) ENSBIXG00005005526 UNC5C (ENSBIXG00005019951) PDHA2 (ENSBIXG00005006818) ENSBIXG00005020010 ENSBIXG00005020038 ENSBIXG00005003297 STPG2 (ENSBIXG00005020087) RAP1GDS1 (ENSBIXG00005020210) ENSBIXG00005003369 #22 TSPAN5 (ENSBIXG00005020262) ENSBIXG00005020276 EIF4E (ENSBIXG00005020322) ENSBIXG00005005594 ADH5 (ENSBIXG00005020398) ENSBIXG00005020447 ADH6 (ENSBIXG00005020520) METAP1 (ENSBIXG00005020582) ENSBIXG00005003522 ADH7 (ENSBIXG00005005993) C4orf17 (ENSBIXG00005021093) TRMT10A (ENSBIXG00005021122) MTTP (ENSBIXG00005021189) C4orf54 (ENSBIXG00005005747) DAPP1 (ENSBIXG00005021282) Bos_a ANCESTRAL SPECIES 33 ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.b.b ENSGT00940000155192 ENSGT00940000160064.b ENSGT00910000144252 ENSGT00940000160278 ENSGT00940000155292 ENSGT00940000155919 ENSGT00950000182815.a.a.a.a.a ENSGT00530000063174.a.j ENSGT00940000161841.i.b.a ENSGT00390000018596.B.b ENSGT00390000014293.a ENSGT00940000161376 ENSGT00940000153362.a.cb.a.a.a #22 ENSGT00950000183183.b.a.q.a.c.b.b ENSGT00940000154194 ENSGT00950000182891.a.a.b.a.b.a.m.a.b ENSGT00940000158205 ENSGT00940000155196 ENSGT00940000162645 ENSGT00940000163645 ENSGT00940000162845 ENSGT00940000155234.b ENSGT00940000162708 ENSGT00510000048844 ENSGT00530000063169.a ENSGT00390000011412 ENSGT00730000111645 ENSGT00910000144274 Domestic yak MODERN SPECIES 25 GRID2 (ENSBGRG00000023510) ATOH1 (ENSBGRG00000023717) SMARCAD1 (ENSBGRG00000023737) HPGDS (ENSBGRG00000000303) PDLIM5 (ENSBGRG00000000397) ENSBGRG00000000612 ENSBGRG00000000618 BMPR1B (ENSBGRG00000000658) UNC5C (ENSBGRG00000000763) PDHA2 (ENSBGRG00000000876) ENSBGRG00000000891 STPG2 (ENSBGRG00000000913) ENSBGRG00000000988 RAP1GDS1 (ENSBGRG00000001075) TSPAN5 (ENSBGRG00000001483) ENSBGRG00000001534 #22 ENSBGRG00000001557 EIF4E (ENSBGRG00000001581) ENSBGRG00000001626 METAP1 (ENSBGRG00000001645) ADH5 (ENSBGRG00000001695) ADH4 (ENSBGRG00000001793) ADH6 (ENSBGRG00000001847) ENSBGRG00000001962 ENSBGRG00000001971 ENSBGRG00000002006 C4orf17 (ENSBGRG00000002084) ADH7 (ENSBGRG00000002104) TRMT10A (ENSBGRG00000002151) MTTP (ENSBGRG00000002196) DAPP1 (ENSBGRG00000002376) Wild yak MODERN SPECIES 1996 ENSBMUG00000002702 #22 ENSBMUG00000002713 ZNF648 (ENSBMUG00000002721) American bison MODERN SPECIES 3358 TMEM218 (ENSBBBG00000011319) PKNOX2 (ENSBBBG00000011302) ENSBBBG00000011294 ENSBBBG00000011285 EI24 (ENSBBBG00000002039) STT3A (ENSBBBG00000008543) CHEK1 (ENSBBBG00000002011) ACRV1 (ENSBBBG00000011061) ENSBBBG00000011050 ENSBBBG00000011040 ENSBBBG00000011034 ENSBBBG00000011030 PATE1 (ENSBBBG00000011028) PATE2 (ENSBBBG00000001983) PATE3 (ENSBBBG00000011015) ENSBBBG00000011011 #22 PUS3 (ENSBBBG00000011000) HYLS1 (ENSBBBG00000010989) DDX25 (ENSBBBG00000010985) VSIG10L2 (ENSBBBG00000010972) CDON (ENSBBBG00000010959) RPUSD4 (ENSBBBG00000010938) FAM118B (ENSBBBG00000010923) SRPRA (ENSBBBG00000010892) FOXRED1 (ENSBBBG00000010861) TIRAP (ENSBBBG00000010837) DCPS (ENSBBBG00000007302) ST3GAL4 (ENSBBBG00000010815) KIRREL3 (ENSBBBG00000010758) ENSBBBG00000010718 Caprinae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.a #22 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES PKN2 (ENSOARG00020006149) LMO4 (ENSOARG00020006088) ENSOARG00020006050 HS2ST1 (ENSOARG00020005954) SELENOF (ENSOARG00020005902) SH3GLB1 (ENSOARG00020005783) ENSOARG00020003537 ENSOARG00020002384 CLCA4 (ENSOARG00020002227) CLCA1 (ENSOARG00020002201) CLCA2 (ENSOARG00020002169) ODF2L (ENSOARG00020002095) COL24A1 (ENSOARG00020002041) CCN1 (ENSOARG00020001971) DDAH1 (ENSOARG00020001916) ENSOARG00020001899 #22 BCL10 (ENSOARG00020001886) C1orf52 (ENSOARG00020001875) SYDE2 (ENSOARG00020001859) DNAI3 (ENSOARG00020001533) ENSOARG00020001462 MCOLN3 (ENSOARG00020001362) MCOLN2 (ENSOARG00020001324) LPAR3 (ENSOARG00020001315) SSX2IP (ENSOARG00020001297) CTBS (ENSOARG00020001255) SPATA1 (ENSOARG00020001225) GNG5 (ENSOARG00020001205) RPF1 (ENSOARG00020001191) DNASE2B (ENSOARG00020001163) ENSOARG00020001133 Rambouillet Sheep MODERN SPECIES 19 MAT2A (ENSOARG00020002979) SH2D6 (ENSOARG00020002951) CAPG (ENSOARG00020002936) ELMOD3 (ENSOARG00020002916) GGCX (ENSOARG00020002878) ENSOARG00020002845 TCF7L1 (ENSOARG00020002813) KCMF1 (ENSOARG00020002774) TMSB10 (ENSOARG00020002756) DNAH6 (ENSOARG00020002647) SUCLG1 (ENSOARG00020002604) ENSOARG00020002597 ENSOARG00020002555 LRRTM1 (ENSOARG00020002530) CTNNA2 (ENSOARG00020002405) ENSOARG00020002369 #22 ENSOARG00020002346 ENSOARG00020002315 ENSOARG00020002303 ENSOARG00020002295 ENSOARG00020002288 ENSOARG00020002275 #22 LRRTM4 (ENSOARG00020002254) ENSOARG00020002231 ENSOARG00020002228 C2orf74 (ENSOARG00020002212) ENSOARG00020002186 USP34 (ENSOARG00020001682) XPO1 (ENSOARG00020001587) ENSOARG00020001558 ENSOARG00020001550 Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.b #22 Bovinae ANCESTRAL SPECIES 8 ENSGT00940000159175 ENSGT00940000160249.f ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b #22 ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t ENSGT00940000153372.A.f.s.a ENSGT00940000161422 ENSGT00940000180978.a ENSGT00940000154774.eb ENSGT00940000153567.b.a.b ENSGT00940000155057 ENSGT00390000011648.a ENSGT00390000007283.m.a ENSGT00390000001969.b ENSGT00910000148391 ENSGT00940000156909 American bison MODERN SPECIES 3176 NRM (ENSBBBG00000011208) ENSBBBG00000011214 ENSBBBG00000002041 FLOT1 (ENSBBBG00000011231) IER3 (ENSBBBG00000011237) ENSBBBG00000011244 SEMA3D (ENSBBBG00000002038) SEMA3A (ENSBBBG00000011305) SEMA3E (ENSBBBG00000011353) ENSBBBG00000011358 ENSBBBG00000002065 ENSBBBG00000011368 ENSBBBG00000002074 CACNA2D1 (ENSBBBG00000002105) HGF (ENSBBBG00000011544) ENSBBBG00000011575 #22 ENSBBBG00000011581 SEMA3C (ENSBBBG00000011614) ENSBBBG00000007398 ENSBBBG00000011738 ENSBBBG00000008026 GNAT3 (ENSBBBG00000011909) GNAI1 (ENSBBBG00000002242) MAGI2 (ENSBBBG00000008731) PHTF2 (ENSBBBG00000012434) ENSBBBG00000012452 RSBN1L (ENSBBBG00000012459) ENSBBBG00000012463 PTPN12 (ENSBBBG00000012512) GSAP (ENSBBBG00000002435) FGL2 (ENSBBBG00000012668) Bos ANCESTRAL SPECIES 8 ENSGT00940000160249.e ENSGT00940000159175 ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b #22 ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t ENSGT00940000153372.A.f.s.a ENSGT00940000161422 ENSGT00940000180978.a ENSGT00940000154774.eb ENSGT00940000153567.b.a.b ENSGT00940000155057 ENSGT00390000011648.a ENSGT00390000007283.m.a ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.a.b.a.b.a ENSGT00390000007283.m.b ENSGT00390000001969.b Bos_b ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.b #22 Hybrid Bos Indicus MODERN SPECIES 23 TMEM243 (ENSBIXG00005021654) DMTF1 (ENSBIXG00005021807) ENSBIXG00005021826 ENSBIXG00005021856 ELAPOR2 (ENSBIXG00005022210) ENSBIXG00005006832 GRM3 (ENSBIXG00005022303) SEMA3D (ENSBIXG00005003818) SEMA3A (ENSBIXG00005022440) SEMA3E (ENSBIXG00005022548) PCLO (ENSBIXG00005022768) ENSBIXG00005022835 ENSBIXG00005022862 CACNA2D1 (ENSBIXG00005023176) HGF (ENSBIXG00005007384) ENSBIXG00005023358 #22 ENSBIXG00005023386 SEMA3C (ENSBIXG00005023456) CD36 (ENSBIXG00005023737) GNAT3 (ENSBIXG00005023815) ENSBIXG00005023840 ENSBIXG00005023851 GNAI1 (ENSBIXG00005024057) ENSBIXG00005024153 MAGI2 (ENSBIXG00005025017) PHTF2 (ENSBIXG00005025460) TMEM60 (ENSBIXG00005025518) ENSBIXG00005004345 RSBN1L (ENSBIXG00005025565) ENSBIXG00005025590 PTPN12 (ENSBIXG00005025692) Bos_a ANCESTRAL SPECIES 12 ENSGT00530000063909.b ENSGT00940000160249.f ENSGT00940000159418 ENSGT01060000248556.C ENSGT00940000153052.c.b.a.b.l.c.b.a ENSGT00390000010221 ENSGT00940000156016 ENSGT00940000154983.c.b ENSGT01030000234595.B.c.b ENSGT00940000156681 ENSGT00940000158203 ENSGT00940000158437 ENSGT00620000087961.a.b.a.a.a.a ENSGT00940000155209 ENSGT00940000156019 ENSGT00940000153362.a.cb.a.a.b #22 ENSGT01100000263506.a.f.a.a.a.a.b ENSGT00940000159379 ENSGT00940000153372.A.f.s.b ENSGT00940000153372.A.f.t ENSGT00940000153372.A.f.s.a ENSGT00940000161422 ENSGT00940000180978.a ENSGT00940000154774.eb ENSGT00940000153567.b.a.b ENSGT00940000155057 ENSGT00390000011648.a ENSGT00390000007283.m.a ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.a.b.a.b.a ENSGT00390000007283.m.b ENSGT00390000001969.b Domestic yak MODERN SPECIES 23 ENSBGRG00000023524 TMEM243 (ENSBGRG00000023481) DMTF1 (ENSBGRG00000023340) ENSBGRG00000023265 ELAPOR2 (ENSBGRG00000022852) GRM3 (ENSBGRG00000022796) ENSBGRG00000022739 ENSBGRG00000022712 SEMA3D (ENSBGRG00000022561) ENSBGRG00000022512 SEMA3A (ENSBGRG00000022242) SEMA3E (ENSBGRG00000021923) PCLO (ENSBGRG00000021472) CACNA2D1 (ENSBGRG00000020514) HGF (ENSBGRG00000020419) ENSBGRG00000020372 #22 ENSBGRG00000020345 SEMA3C (ENSBGRG00000020231) CD36 (ENSBGRG00000019844) GNAT3 (ENSBGRG00000019625) ENSBGRG00000019597 GNAI1 (ENSBGRG00000019449) ENSBGRG00000019428 ENSBGRG00000019379 ENSBGRG00000019359 ENSBGRG00000019329 MAGI2 (ENSBGRG00000016288) PHTF2 (ENSBGRG00000015566) TMEM60 (ENSBGRG00000015510) ENSBGRG00000015493 RSBN1L (ENSBGRG00000015320) Caprinae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.a.b #22 Rambouillet Sheep MODERN SPECIES FXR1 (ENSOARG00020005863) TTC14 (ENSOARG00020006723) CCDC39 (ENSOARG00020006964) PEX5L (ENSOARG00020007531) USP13 (ENSOARG00020008860) NDUFB5 (ENSOARG00020009071) MRPL47 (ENSOARG00020009272) ACTL6A (ENSOARG00020009394) GNB4 (ENSOARG00020009587) MFN1 (ENSOARG00020009679) ZNF639 (ENSOARG00020009893) ENSOARG00020009952 PIK3CA (ENSOARG00020010030) ZMAT3 (ENSOARG00020000075) KCNMB2 (ENSOARG00020000078) ENSOARG00020000133 #22 TBL1XR1 (ENSOARG00020000203) ENSOARG00020000331 NAALADL2 (ENSOARG00020000356) NLGN1 (ENSOARG00020000438) ENSOARG00020000457 SPATA16 (ENSOARG00020000484) ECT2 (ENSOARG00020000567) NCEH1 (ENSOARG00020000787) FNDC3B (ENSOARG00020000887) TNFSF10 (ENSOARG00020001008) GHSR (ENSOARG00020001032) TMEM212 (ENSOARG00020001050) PLD1 (ENSOARG00020001072) TNIK (ENSOARG00020001197) SLC2A2 (ENSOARG00020001524) Bovidae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.a.b #22 Bovinae ANCESTRAL SPECIES 29 ENSGT00940000161074.a ENSGT00390000015700.a ENSGT00390000010065 ENSGT00940000159395 ENSGT00940000155756 ENSGT00530000063872.B ENSGT00390000017860.a.b ENSGT01100000263512.a.a.a.b ENSGT00940000162154 ENSGT00390000013512 ENSGT00510000046929.a ENSGT00390000012721.b ENSGT00950000183055.a.a ENSGT00950000183183.b.b.n ENSGT00950000183375 ENSGT00940000153362.a.cb.a.b #22 ENSGT00940000159810 ENSGT00940000160718 ENSGT00390000009902.o ENSGT00940000158453.a ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.a.b ENSGT01050000244897.a.b.b.b ENSGT00940000155186.t.d ENSGT00940000156856 ENSGT00940000159196 ENSGT00940000153981.A ENSGT00940000162795 ENSGT00940000153931.a.a ENSGT00940000153931.a.b.a.a.b.a.b ENSGT00940000153931.a.b.a.a.a.a Bos DUPLICATION Bos ANCESTRAL SPECIES 8 ENSGT00940000158973.b ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a #22 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 ENSGT00940000157852 ENSGT00940000159695.h ENSGT00940000155142 ENSGT00390000011176 ENSGT00940000156175 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b Bos_b ANCESTRAL SPECIES 7 ENSGT00940000158444 ENSGT00940000158973.b ENSGT00390000015164.s.a ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a #22 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 ENSGT00940000157852 ENSGT00940000159695.h ENSGT00940000155142 ENSGT00390000011176 ENSGT00940000156175 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b ENSGT00940000153143.a.a.f.e.a.a.a ENSGT00940000153143.a.a.f.e.a.a.b.b Hybrid Bos Indicus MODERN SPECIES 23 NUDCD3 (ENSBIXG00005018870) CAMK2B (ENSBIXG00005019061) ENSBIXG00005003122 ENSBIXG00005003126 GCK (ENSBIXG00005019239) MYL7 (ENSBIXG00005019279) AEBP1 (ENSBIXG00005019312) POLD2 (ENSBIXG00005019352) POLM (ENSBIXG00005005521) BLVRA (ENSBIXG00005003157) ENSBIXG00005006146 HECW1 (ENSBIXG00005019608) MRPL32 (ENSBIXG00005019681) PSMA2 (ENSBIXG00005007827) C7orf25 (ENSBIXG00005019735) ENSBIXG00005006253 #22 GLI3 (ENSBIXG00005019847) INHBA (ENSBIXG00005019918) ENSBIXG00005019940 SUGCT (ENSBIXG00005003265) MPLKIP (ENSBIXG00005020016) CDK13 (ENSBIXG00005020092) ENSBIXG00005020109 ENSBIXG00005020124 RALA (ENSBIXG00005020138) YAE1 (ENSBIXG00005005866) POU6F2 (ENSBIXG00005020231) VPS41 (ENSBIXG00005020347) ENSBIXG00005020415 AMPH (ENSBIXG00005020476) ENSBIXG00005006259 Bos_a ANCESTRAL SPECIES 12 ENSGT00940000158973.b ENSGT00390000015164.s ENSGT00950000182787.E.d.e.b ENSGT00940000161682 ENSGT00390000006780 ENSGT00940000158323 ENSGT00940000158490 ENSGT00390000011072.c.a ENSGT00440000033985 ENSGT00940000154014.a ENSGT00940000158294 ENSGT01100000263600 ENSGT00390000014996 ENSGT00550000074870.b ENSGT00390000014722 ENSGT00940000153362.a.cb.a.b.a #22 ENSGT00940000155925 ENSGT00940000157116 ENSGT00940000157866 ENSGT00390000002582 ENSGT00940000157852 ENSGT00940000159695.h ENSGT00940000155142 ENSGT00390000011176 ENSGT00940000156175 ENSGT00390000000481 ENSGT00950000182882.A.b.a ENSGT00940000153143.a.b.b.a.b.d.b.a.b.a.a ENSGT00940000156821.p.b ENSGT00940000153143.a.b.b.a.b.d.b.a.b.b ENSGT00940000153143.a.a.f.e.a.b Domestic yak MODERN SPECIES 23 CAMK2B (ENSBGRG00000012404) YKT6 (ENSBGRG00000012169) GCK (ENSBGRG00000011827) ENSBGRG00000011683 POLD2 (ENSBGRG00000011507) AEBP1 (ENSBGRG00000011094) POLM (ENSBGRG00000010989) BLVRA (ENSBGRG00000010875) ENSBGRG00000010681 STK17A (ENSBGRG00000010569) ENSBGRG00000010541 HECW1 (ENSBGRG00000010187) MRPL32 (ENSBGRG00000010055) ENSBGRG00000009970 C7orf25 (ENSBGRG00000009953) ENSBGRG00000009871 #22 GLI3 (ENSBGRG00000009720) INHBA (ENSBGRG00000009678) ENSBGRG00000009661 SUGCT (ENSBGRG00000009489) MPLKIP (ENSBGRG00000009446) CDK13 (ENSBGRG00000009206) ENSBGRG00000009155 RALA (ENSBGRG00000009084) YAE1 (ENSBGRG00000009045) POU6F2 (ENSBGRG00000008844) VPS41 (ENSBGRG00000008270) AMPH (ENSBGRG00000007825) ENSBGRG00000007791 ENSBGRG00000007724 ENSBGRG00000007684 Bos ANCESTRAL SPECIES 28 ENSGT00390000003420.a.b.v.a ENSGT00390000015700.a ENSGT00390000010065 ENSGT00940000159395 ENSGT00940000155756 ENSGT00530000063872.B ENSGT00390000017860.a.b ENSGT01100000263512.a.a.a.b ENSGT00940000162154 ENSGT00390000013512 ENSGT00510000046929.a ENSGT00390000012721.b ENSGT00950000183055.a.a ENSGT00950000183183.b.b.n ENSGT00950000183375 ENSGT00940000153362.a.cb.a.b.b #22 ENSGT00940000159810 ENSGT00940000160718 ENSGT00390000009902.o ENSGT00940000158453.a ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.a.b ENSGT01050000244897.a.b.b.b ENSGT00940000155186.t.d ENSGT00940000156856 ENSGT00940000159196 ENSGT00940000153981.A ENSGT00940000162795 ENSGT00940000153931.a.a ENSGT00940000153931.a.b.a.a.a.a.c.a ENSGT00940000153931.a.b.a.b.a.b.b.b.b Bos_b ANCESTRAL SPECIES 33 ENSGT00390000003420.a.b.v.a ENSGT00390000015700.a ENSGT00390000010065 ENSGT00940000159395 ENSGT00940000155756 ENSGT00530000063872.B ENSGT00390000017860.a.b ENSGT01100000263512.a.a.a.b ENSGT00940000162154 ENSGT00390000013512 ENSGT00510000046929.a ENSGT00390000012721.b ENSGT00950000183055.a.a ENSGT00950000183183.b.b.n ENSGT00950000183375 ENSGT00940000153362.a.cb.a.b.b #22 ENSGT00940000159810 ENSGT00940000160718 ENSGT00390000009902.o ENSGT00940000158453.a ENSGT00940000157437.cb ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.a.b ENSGT01050000244897.a.b.b.b ENSGT00940000155186.t.d ENSGT00940000156856 ENSGT00940000159196 ENSGT00940000153981.A ENSGT00940000162795 ENSGT00940000153931.a.a ENSGT00940000153931.a.b.a.a.a.b Hybrid Bos Indicus MODERN SPECIES 3 ENSBIXG00005030621 ACOD1 (ENSBIXG00005030632) CLN5 (ENSBIXG00005030640) FBXL3 (ENSBIXG00005030647) MYCBP2 (ENSBIXG00005030675) SCEL (ENSBIXG00005030770) SLAIN1 (ENSBIXG00005030824) EDNRB (ENSBIXG00005030835) POU4F1 (ENSBIXG00005030848) OBI1 (ENSBIXG00005030850) RBM26 (ENSBIXG00005030874) NDFIP2 (ENSBIXG00005030900) SPRY2 (ENSBIXG00005030925) ENSBIXG00005030943 ENSBIXG00005030951 ENSBIXG00005030959 #22 SLITRK1 (ENSBIXG00005030962) ENSBIXG00005030973 SLITRK6 (ENSBIXG00005029231) ENSBIXG00005001608 SLITRK5 (ENSBIXG00005001645) ENSBIXG00005029197 GPC5 (ENSBIXG00005001799) GPC6 (ENSBIXG00005001836) ENSBIXG00005005175 ENSBIXG00005005171 DCT (ENSBIXG00005029117) ENSBIXG00005001900 TGDS (ENSBIXG00005001934) GPR180 (ENSBIXG00005002008) SOX21 (ENSBIXG00005029041) American bison MODERN SPECIES 3261 ENSBBBG00000007476 #22 SLITRK1 (ENSBBBG00000022398) SLITRK6 (ENSBBBG00000008789) SLITRK5 (ENSBBBG00000022422) ENSBBBG00000022428 GPC5 (ENSBBBG00000005931) Bovidae ANCESTRAL SPECIES 3 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00390000012446.o.b ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Bovinae DUPLICATION Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 20 ENSGT00860000134050 ENSGT00940000153431.b ENSGT00940000154327.b.e.b ENSGT01030000234532.A.a.a.b ENSGT00390000001138.a.g.b ENSGT00940000154866.B ENSGT00550000075046 ENSGT00550000074931 ENSGT00390000004987 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000153362.a.cb.b.a.a #22 ENSGT00940000159137 ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554 ENSGT00390000005826.a.b ENSGT00900000141212 ENSGT00910000144356 ENSGT00940000162636.B ENSGT00940000165454 ENSGT00940000162294 ENSGT00940000163249 ENSGT00940000161877.j ENSGT00940000154755 Bos ANCESTRAL SPECIES 22 ENSGT00860000134050 ENSGT00940000153431.b ENSGT00940000154327.b.e.b ENSGT01030000234532.A.a.a.b ENSGT00390000001138.a.g.b ENSGT00940000154866.B.d ENSGT00550000075046 ENSGT00550000074931 ENSGT00390000004987 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000153362.a.cb.b.a.a #22 ENSGT00940000159137.d ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b ENSGT00900000141212 ENSGT00910000144356 ENSGT00940000162636.B ENSGT00940000165454 ENSGT00940000162294 ENSGT00940000163249 ENSGT00940000161877.j ENSGT00940000154755 Bos_a ANCESTRAL SPECIES 7 ENSGT00940000153431.b ENSGT00950000183210.d.a.c.a.a.b.f.a.b ENSGT00940000154327.b.e.b ENSGT01030000234532.A.a.a.b ENSGT00960000190537 ENSGT00940000154866.B.d ENSGT00550000075046 ENSGT00550000074931 ENSGT00390000004987 ENSGT00940000162552 ENSGT00950000183139.A ENSGT00390000010121 ENSGT00670000098098 ENSGT00940000162247 ENSGT00940000159727 ENSGT00940000153362.a.cb.b.a.a #22 ENSGT00940000159137.d ENSGT00940000155999 ENSGT00940000163276 ENSGT00940000156996 ENSGT00940000162041 ENSGT00870000136554.jb ENSGT00390000005826.a.b ENSGT00900000141212 ENSGT00910000144356 ENSGT00940000162636.B ENSGT00940000165454 ENSGT00940000162294 ENSGT00940000163249 ENSGT00940000161877.j ENSGT00940000154755 Wild yak MODERN SPECIES 194 SEC23B (ENSBMUG00000004165) SMIM26 (ENSBMUG00000004015) DTD1 (ENSBMUG00000004000) ENSBMUG00000003967 SCP2D1 (ENSBMUG00000003945) SLC24A3 (ENSBMUG00000003930) ENSBMUG00000003910 RIN2 (ENSBMUG00000003883) NAA20 (ENSBMUG00000003835) CRNKL1 (ENSBMUG00000003809) CFAP61 (ENSBMUG00000003762) RALGAPA2 (ENSBMUG00000003599) KIZ (ENSBMUG00000003411) XRN2 (ENSBMUG00000003295) NKX2-2 (ENSBMUG00000003181) ENSBMUG00000003171 #22 PAX1 (ENSBMUG00000003140) FOXA2 (ENSBMUG00000003127) ENSBMUG00000003102 CD93 (ENSBMUG00000003082) American bison MODERN SPECIES 2997 SEC23B (ENSBBBG00000023236) SMIM26 (ENSBBBG00000000399) DTD1 (ENSBBBG00000000410) SCP2D1 (ENSBBBG00000000425) SLC24A3 (ENSBBBG00000000461) ENSBBBG00000023147 RIN2 (ENSBBBG00000023140) NAA20 (ENSBBBG00000023097) CRNKL1 (ENSBBBG00000008793) CFAP61 (ENSBBBG00000006046) ENSBBBG00000022996 RALGAPA2 (ENSBBBG00000022984) KIZ (ENSBBBG00000022908) XRN2 (ENSBBBG00000022814) ENSBBBG00000022786 ENSBBBG00000022780 #22 PAX1 (ENSBBBG00000022763) FOXA2 (ENSBBBG00000022700) THBD (ENSBBBG00000022684) CD93 (ENSBBBG00000005967) GZF1 (ENSBBBG00000022655) NAPB (ENSBBBG00000022632) CSTL1 (ENSBBBG00000022543) ENSBBBG00000022535 ENSBBBG00000022528 ENSBBBG00000005942 CST8 (ENSBBBG00000022516) ENSBBBG00000022506 ENSBBBG00000022502 CST3 (ENSBBBG00000005938) SYNDIG1 (ENSBBBG00000022490) Bovinae ANCESTRAL SPECIES ENSGT00940000153362.a.cb.b.a.b #22 American bison MODERN SPECIES 3179 SMARCAD1 (ENSBBBG00000021403) HPGDS (ENSBBBG00000005710) PDLIM5 (ENSBBBG00000021614) ENSBBBG00000021647 BMPR1B (ENSBBBG00000021707) UNC5C (ENSBBBG00000021798) PDHA2 (ENSBBBG00000021816) ENSBBBG00000021827 ENSBBBG00000021839 ENSBBBG00000021848 RAP1GDS1 (ENSBBBG00000022062) TSPAN5 (ENSBBBG00000005833) ENSBBBG00000022107 #22 ENSBBBG00000022115 EIF4E (ENSBBBG00000005843) ENSBBBG00000022134 METAP1 (ENSBBBG00000022151) ADH5 (ENSBBBG00000022169) ENSBBBG00000022176 ADH4 (ENSBBBG00000022206) ENSBBBG00000022216 ADH6 (ENSBBBG00000007283) ENSBBBG00000005881 ENSBBBG00000022361 ADH7 (ENSBBBG00000005915) C4orf17 (ENSBBBG00000022450) TRMT10A (ENSBBBG00000022485) MTTP (ENSBBBG00000022532) Bovinae ANCESTRAL SPECIES 17 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00390000012446.o.b ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 American bison DUPLICATION American bison MODERN SPECIES 2940 ENSBBBG00000021397 NAV3 (ENSBBBG00000021636) #16 E2F7 (ENSBBBG00000021699) #17 CSRP2 (ENSBBBG00000021745) #18 ZDHHC17 (ENSBBBG00000007523) #19 OSBPL8 (ENSBBBG00000021874) #20 BBS10 (ENSBBBG00000021881) #21 NAP1L1 (ENSBBBG00000022264) #22 PHLDA1 (ENSBBBG00000022301) #23 American bison MODERN SPECIES 3236 SMG7 (ENSBBBG00000022738) NMNAT2 (ENSBBBG00000022479) ENSBBBG00000005913 LAMC2 (ENSBBBG00000022403) LAMC1 (ENSBBBG00000008530) SHCBP1L (ENSBBBG00000007157) DHX9 (ENSBBBG00000022215) NPL (ENSBBBG00000022171) RGS8 (ENSBBBG00000022106) RGS16 (ENSBBBG00000007524) RNASEL (ENSBBBG00000005821) RGSL1 (ENSBBBG00000005819) ENSBBBG00000022020 TEDDM1 (ENSBBBG00000022011) GLUL (ENSBBBG00000021994) ENSBBBG00000021962 #22 ENSBBBG00000005807 CACNA1E (ENSBBBG00000021895) Bos ANCESTRAL SPECIES 2 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00390000012446.o.b ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Bos_a ANCESTRAL SPECIES 3 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000168324 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00390000012446.o.b ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Wild yak MODERN SPECIES 2471 NAP1L1 (ENSBMUG00000024122) #22 ENSBMUG00000024163 #23 KRR1 (ENSBMUG00000024174) #24 GLIPR1 (ENSBMUG00000024185) #25 ENSBMUG00000024208 #26 GLIPR1L1 (ENSBMUG00000024253) #28 CAPS2 (ENSBMUG00000024285) #29 Domestic yak DUPLICATION Domestic yak DUPLICATION Domestic yak MODERN SPECIES 24 PPP1R12A (ENSBGRG00000006560) #13 ENSBGRG00000007448 PAWR (ENSBGRG00000007479) #14 ENSBGRG00000007603 SYT1 (ENSBGRG00000007621) #15 NAV3 (ENSBGRG00000007767) #16 ENSBGRG00000009036 ENSBGRG00000009079 ENSBGRG00000009095 E2F7 (ENSBGRG00000009145) #17 ENSBGRG00000009376 ##18 ZDHHC17 (ENSBGRG00000009471) #19 ENSBGRG00000009858 OSBPL8 (ENSBGRG00000009892) #20 BBS10 (ENSBGRG00000010078) #21 ENSBGRG00000010174 #22 PHLDA1 (ENSBGRG00000010374) #23 ENSBGRG00000010394 KRR1 (ENSBGRG00000010440) #24 GLIPR1 (ENSBGRG00000010721) #25 GLIPR1L2 (ENSBGRG00000010806) #26 ENSBGRG00000011010 #28 CAPS2 (ENSBGRG00000011068) #29 KCNC2 (ENSBGRG00000011149) #30 ENSBGRG00000011407 ATXN7L3B (ENSBGRG00000011433) #32 TRHDE (ENSBGRG00000011474) #33 TPH2 (ENSBGRG00000011814) #34 TBC1D15 (ENSBGRG00000012147) #35 TMEM19 (ENSBGRG00000012941) #37 THAP2 (ENSBGRG00000013015) Domestic yak MODERN SPECIES 22 KPRP (ENSBGRG00000003208) ENSBGRG00000003211 LCE1A (ENSBGRG00000003227) ENSBGRG00000004507 ENSBGRG00000004519 ENSBGRG00000004601 ENSBGRG00000004647 SPRR2F (ENSBGRG00000004668) ENSBGRG00000004711 ENSBGRG00000004742 SPRR2G (ENSBGRG00000004765) PRR9 (ENSBGRG00000004801) ENSBGRG00000004816 PGLYRP3 (ENSBGRG00000004868) PGLYRP4 (ENSBGRG00000004934) ENSBGRG00000004975 #22 S100A9 (ENSBGRG00000004994) S100A12 (ENSBGRG00000005016) S100A8 (ENSBGRG00000005058) ENSBGRG00000005077 PTBP2 (ENSBGRG00000005149) DPYD (ENSBGRG00000005648) ENSBGRG00000006033 ENSBGRG00000006046 ENSBGRG00000006069 SNX7 (ENSBGRG00000006091) PLPPR5 (ENSBGRG00000006168) PLPPR4 (ENSBGRG00000006225) PALMD (ENSBGRG00000006265) FRRS1 (ENSBGRG00000006372) AGL (ENSBGRG00000006495) Domestic yak MODERN SPECIES 16 MYMX (ENSBGRG00000008830) SLC29A1 (ENSBGRG00000007719) SLC35B2 (ENSBGRG00000007502) NFKBIE (ENSBGRG00000007378) ENSBGRG00000007091 TCTE1 (ENSBGRG00000007036) TMEM151B (ENSBGRG00000006948) AARS2 (ENSBGRG00000025693) SPATS1 (ENSBGRG00000025671) CDC5L (ENSBGRG00000025587) SUPT3H (ENSBGRG00000025521) RUNX2 (ENSBGRG00000025453) CLIC5 (ENSBGRG00000025358) ENPP4 (ENSBGRG00000025340) ENPP5 (ENSBGRG00000025336) ENSBGRG00000025324 #22 ENSBGRG00000025310 RCAN2 (ENSBGRG00000025293) CYP39A1 (ENSBGRG00000025184) SLC25A27 (ENSBGRG00000025100) TDRD6 (ENSBGRG00000025033) PLA2G7 (ENSBGRG00000025010) ANKRD66 (ENSBGRG00000024998) MEP1A (ENSBGRG00000024947) ADGRF5 (ENSBGRG00000024816) ENSBGRG00000024786 TNFRSF21 (ENSBGRG00000024761) ENSBGRG00000024745 CD2AP (ENSBGRG00000024637) ENSBGRG00000024509 OPN5 (ENSBGRG00000024436) Domestic yak MODERN SPECIES 5 NMNAT2 (ENSBGRG00000012459) LAMC2 (ENSBGRG00000012337) LAMC1 (ENSBGRG00000011557) SHCBP1L (ENSBGRG00000011416) DHX9 (ENSBGRG00000011274) ENSBGRG00000011243 NPL (ENSBGRG00000010902) RGS8 (ENSBGRG00000010657) RGS16 (ENSBGRG00000015227) RNASEL (ENSBGRG00000015168) RGSL1 (ENSBGRG00000014841) ENSBGRG00000014780 TEDDM1 (ENSBGRG00000014753) GLUL (ENSBGRG00000014687) ENSBGRG00000014672 ENSBGRG00000014650 #22 ZNF648 (ENSBGRG00000014628) CACNA1E (ENSBGRG00000012423) IER5 (ENSBGRG00000012291) MR1 (ENSBGRG00000012122) STX6 (ENSBGRG00000011900) KIAA1614 (ENSBGRG00000011597) XPR1 (ENSBGRG00000011164) ENSBGRG00000011090 LHX4 (ENSBGRG00000010947) QSOX1 (ENSBGRG00000010745) CEP350 (ENSBGRG00000010338) TOR1AIP1 (ENSBGRG00000009663) TOR1AIP2 (ENSBGRG00000009586) FAM163A (ENSBGRG00000009534) TDRD5 (ENSBGRG00000009089) Bos_b DUPLICATION Bos_b DUPLICATION Bos_b DUPLICATION Bos_b ANCESTRAL SPECIES 14 ENSGT00530000063555.A.a.a ENSGT00940000155527 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000153362.a.cb.b.b.f.a.a #22 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.m.b.b ENSGT00940000153212.h.m.b.a ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.b.a.b ENSGT00940000153212.h.m.a.a.b.b ENSGT00940000153212.h.m.a.a.a.b ENSGT00940000153212.h.m.a.a.a.a ENSGT00940000153212.h.m.a.b.e ENSGT00940000164288.d.a.a ENSGT00940000164288.d.a.b.a ENSGT00940000164288.d.a.b.b ENSGT00940000164288.d.b ENSGT00940000164288.c ENSGT00940000162432 Hybrid Bos Indicus MODERN SPECIES 25 TECRL (ENSBIXG00005001707) EPHA5 (ENSBIXG00005029155) ENSBIXG00005001983 ENSBIXG00005002006 CENPC (ENSBIXG00005002020) ENSBIXG00005002083 STAP1 (ENSBIXG00005002107) UBA6 (ENSBIXG00005028961) GNRHR (ENSBIXG00005005075) ENSBIXG00005002215 TMPRSS11D (ENSBIXG00005028894) TMPRSS11A (ENSBIXG00005005025) ENSBIXG00005028837 TMPRSS11F (ENSBIXG00005028799) ENSBIXG00005007602 ENSBIXG00005028740 #22 TMPRSS11E (ENSBIXG00005028657) YTHDC1 (ENSBIXG00005028621) ENSBIXG00005004925 ENSBIXG00005028487 ENSBIXG00005028398 ENSBIXG00005004881 SULT1B1 (ENSBIXG00005028302) SULT1E1 (ENSBIXG00005004863) ENSBIXG00005028192 ENSBIXG00005028141 ENSBIXG00005028102 ENSBIXG00005028086 ENSBIXG00005028072 ENSBIXG00005028054 ODAM (ENSBIXG00005004819) Cow MODERN SPECIES 25 TECRL (ENSBTAG00000024826) ENSBTAG00000050977 EPHA5 (ENSBTAG00000009438) ENSBTAG00000053125 ENSBTAG00000052362 CENPC (ENSBTAG00000001323) STAP1 (ENSBTAG00000000962) UBA6 (ENSBTAG00000006837) GNRHR (ENSBTAG00000000438) ENSBTAG00000038648 TMPRSS11D (ENSBTAG00000001925) TMPRSS11A (ENSBTAG00000020298) ENSBTAG00000025920 TMPRSS11F (ENSBTAG00000004412) TMPRSS11BNL (ENSBTAG00000048377) NAP1L1 (ENSBTAG00000032360) #22 TMPRSS11E (ENSBTAG00000038520) YTHDC1 (ENSBTAG00000015572) ENSBTAG00000035726 ENSBTAG00000048013 ENSBTAG00000051713 ENSBTAG00000054846 ENSBTAG00000053068 ENSBTAG00000055078 UGT2B10 (ENSBTAG00000039991) ENSBTAG00000049291 ENSBTAG00000003523 MGC152010 (ENSBTAG00000039647) ENSBTAG00000052023 ENSBTAG00000053282 ENSBTAG00000053565 Bos_b ANCESTRAL SPECIES ENSGT00940000153362.a.cb.b.b.f.a.b #22 Hybrid Bos Indicus MODERN SPECIES 15 MYMX (ENSBIXG00005029092) SLC29A1 (ENSBIXG00005029077) ENSBIXG00005005101 SLC35B2 (ENSBIXG00005028950) TMEM151B (ENSBIXG00005005053) TCTE1 (ENSBIXG00005028882) AARS2 (ENSBIXG00005002270) SPATS1 (ENSBIXG00005005004) CDC5L (ENSBIXG00005028783) SUPT3H (ENSBIXG00005002363) RUNX2 (ENSBIXG00005028546) CLIC5 (ENSBIXG00005004883) ENPP4 (ENSBIXG00005004865) ENPP5 (ENSBIXG00005028257) RCAN2 (ENSBIXG00005028228) ENSBIXG00005028148 #22 CYP39A1 (ENSBIXG00005028098) SLC25A27 (ENSBIXG00005004811) TDRD6 (ENSBIXG00005027935) PLA2G7 (ENSBIXG00005027887) ANKRD66 (ENSBIXG00005004789) ENSBIXG00005027818 ADGRF5 (ENSBIXG00005027719) ADGRF1 (ENSBIXG00005027562) TNFRSF21 (ENSBIXG00005004727) ENSBIXG00005027452 CD2AP (ENSBIXG00005004724) ENSBIXG00005027376 ADGRF4 (ENSBIXG00005027323) OPN5 (ENSBIXG00005027293) PTCHD4 (ENSBIXG00005027231) Bos_b ANCESTRAL SPECIES 4 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT01030000234758.a.a.b.a.a.b.b.a.a ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00390000012446.o.b ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.b.a.a.a.b ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b.b.f.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786.k #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Hybrid Bos Indicus MODERN SPECIES 24 PTPRQ (ENSBIXG00005009087) #11 OTOGL (ENSBIXG00005008900) #12 PPP1R12A (ENSBIXG00005000226) #13 ENSBIXG00005000182 PAWR (ENSBIXG00005000179) #14 SYT1 (ENSBIXG00005008356) #15 ENSBIXG00005008283 NAV3 (ENSBIXG00005000135) #16 ENSBIXG00005008045 E2F7 (ENSBIXG00005008016) #17 CSRP2 (ENSBIXG00005007979) #18 ZDHHC17 (ENSBIXG00005000041) #19 OSBPL8 (ENSBIXG00005007884) #20 ENSBIXG00005029293 BBS10 (ENSBIXG00005029298) #21 ENSBIXG00005029325 #22 PHLDA1 (ENSBIXG00005029359) #23 ENSBIXG00005029389 KRR1 (ENSBIXG00005029408) #24 GLIPR1 (ENSBIXG00005029431) #25 ENSBIXG00005029442 #26 GLIPR1L1 (ENSBIXG00005029466) #28 CAPS2 (ENSBIXG00005029482) #29 KCNC2 (ENSBIXG00005029515) #30 ENSBIXG00005029561 ATXN7L3B (ENSBIXG00005029601) #32 TRHDE (ENSBIXG00005029642) #33 ENSBIXG00005029683 TPH2 (ENSBIXG00005029698) #34 TBC1D15 (ENSBIXG00005029740) #35 ENSBIXG00005029792 #36 Bos_b ANCESTRAL SPECIES 27 ENSGT00940000158333 ENSGT00950000183179.a ENSGT00910000147592 ENSGT00940000160470 ENSGT00940000158069 ENSGT00940000161173 ENSGT00940000155924.b ENSGT00530000063604.B ENSGT00940000154304.A ENSGT00940000154304.B ENSGT00940000161114 ENSGT00660000095605 ENSGT00940000164414 ENSGT00940000161715 ENSGT00390000010047.b.jb ENSGT00940000153362.a.cb.b.b.g #22 ENSGT00390000003316.d.h ENSGT00940000163676 ENSGT00940000155601 ENSGT00900000141021.a ENSGT01100000263517.b.d.m.b.b ENSGT00940000157639 ENSGT00390000013003 ENSGT00500000044895 ENSGT00940000157458.d ENSGT00940000157906 ENSGT00940000159504 ENSGT00940000155130 ENSGT00390000012166.p ENSGT00430000032886 ENSGT00390000012166.o Hybrid Bos Indicus MODERN SPECIES 7 NCF2 (ENSBIXG00005027338) SMG7 (ENSBIXG00005027479) NMNAT2 (ENSBIXG00005027618) LAMC2 (ENSBIXG00005027722) LAMC1 (ENSBIXG00005004790) SHCBP1L (ENSBIXG00005006959) DHX9 (ENSBIXG00005027970) NPL (ENSBIXG00005028073) RGS8 (ENSBIXG00005028123) ENSBIXG00005006973 RGS16 (ENSBIXG00005028151) RNASEL (ENSBIXG00005028181) RGSL1 (ENSBIXG00005028387) TEDDM1 (ENSBIXG00005028477) ENSBIXG00005028507 ENSBIXG00005028539 #22 ENSBIXG00005028552 ZNF648 (ENSBIXG00005005342) CACNA1E (ENSBIXG00005001875) MR1 (ENSBIXG00005001710) STX6 (ENSBIXG00005029212) KIAA1614 (ENSBIXG00005001597) XPR1 (ENSBIXG00005030435) ENSBIXG00005030417 LHX4 (ENSBIXG00005030406) QSOX1 (ENSBIXG00005030393) CEP350 (ENSBIXG00005030338) TOR1AIP1 (ENSBIXG00005030292) ENSBIXG00005030268 TOR1AIP2 (ENSBIXG00005030252) TDRD5 (ENSBIXG00005030203) Cow DUPLICATION Cow MODERN SPECIES 25 ENSBTAG00000053441 GRID2 (ENSBTAG00000046413) ATOH1 (ENSBTAG00000002895) SMARCAD1 (ENSBTAG00000017061) HPGDS (ENSBTAG00000017073) PDLIM5 (ENSBTAG00000012818) BMPR1B (ENSBTAG00000002081) ENSBTAG00000050287 UNC5C (ENSBTAG00000002084) PDHA2 (ENSBTAG00000026250) ENSBTAG00000015464 ENSBTAG00000023000 STPG2 (ENSBTAG00000049465) RAP1GDS1 (ENSBTAG00000007522) TSPAN5 (ENSBTAG00000012343) ENSBTAG00000024578 #22 EIF4E (ENSBTAG00000009522) ENSBTAG00000024125 METAP1 (ENSBTAG00000016004) ADH5 (ENSBTAG00000016007) ENSBTAG00000055127 ADH4 (ENSBTAG00000034139) ENSBTAG00000052318 ADH6 (ENSBTAG00000006991) ADH6 (ENSBTAG00000006986) ADH1C (ENSBTAG00000034189) ADH7 (ENSBTAG00000015729) C6H4orf17 (ENSBTAG00000019429) TRMT10A (ENSBTAG00000000197) MTTP (ENSBTAG00000011944) C6H4orf54 (ENSBTAG00000046333) Cow MODERN SPECIES 7 SMG7 (ENSBTAG00000008003) NMNAT2 (ENSBTAG00000000795) ENSBTAG00000049987 LAMC2 (ENSBTAG00000000793) LAMC1 (ENSBTAG00000011966) SHCBP1L (ENSBTAG00000031238) DHX9 (ENSBTAG00000019821) NPL (ENSBTAG00000002266) RGS8 (ENSBTAG00000026481) RGS16 (ENSBTAG00000004305) RNASEL (ENSBTAG00000009091) RGSL1 (ENSBTAG00000018220) ENSBTAG00000000772 TEDDM1 (ENSBTAG00000021432) GLUL (ENSBTAG00000013631) ENSBTAG00000027426 #22 ENSBTAG00000052482 ZNF648 (ENSBTAG00000046243) CACNA1E (ENSBTAG00000020887) ENSBTAG00000052226 MR1 (ENSBTAG00000009924) STX6 (ENSBTAG00000020458) KIAA1614 (ENSBTAG00000006260) XPR1 (ENSBTAG00000009169) ACBD6 (ENSBTAG00000046502) LHX4 (ENSBTAG00000003992) QSOX1 (ENSBTAG00000014191) CEP350 (ENSBTAG00000008082) TOR1AIP1 (ENSBTAG00000035226) TOR1AIP2 (ENSBTAG00000035230) FAM163A (ENSBTAG00000049599) Caprinae ANCESTRAL SPECIES ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a.n #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.cb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 22 ABRAXAS1 (ENSOARG00020014754) MRPS18C (ENSOARG00020014621) HELQ (ENSOARG00020014284) HPSE (ENSOARG00020013610) COQ2 (ENSOARG00020013352) ENSOARG00020013289 PLAC8 (ENSOARG00020013230) COPS4 (ENSOARG00020013112) LIN54 (ENSOARG00020012720) THAP9 (ENSOARG00020012606) SEC31A (ENSOARG00020010858) SCD5 (ENSOARG00020010678) TMEM150C (ENSOARG00020010556) ENOPH1 (ENSOARG00020010424) HNRNPDL (ENSOARG00020010186) ENSOARG00020010101 #22 HNRNPD (ENSOARG00020009917) RASGEF1B (ENSOARG00020009096) PRKG2 (ENSOARG00020008731) ENSOARG00020008692 FGF5 (ENSOARG00020008615) PRDM8 (ENSOARG00020008584) ANTXR2 (ENSOARG00020008268) ENSOARG00020008183 BMP3 (ENSOARG00020008128) GK2 (ENSOARG00020008089) NAA11 (ENSOARG00020008072) PAQR3 (ENSOARG00020008001) BMP2K (ENSOARG00020007544) ANXA3 (ENSOARG00020007381) FRAS1 (ENSOARG00020006780) Rambouillet Sheep DUPLICATION Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES AKAP8L (ENSOARG00020003575) WIZ (ENSOARG00020003398) RASAL3 (ENSOARG00020003296) PGLYRP2 (ENSOARG00020003263) CYP4F22 (ENSOARG00020003197) CYP4F8 (ENSOARG00020003149) ENSOARG00020003101 ENSOARG00020003031 ENSOARG00020002976 ENSOARG00020002924 CYP4F21 (ENSOARG00020002888) ENSOARG00020002873 ENSOARG00020002865 ENSOARG00020002856 ENSOARG00020002852 ENSOARG00020002843 #22 NSUN3 (ENSOARG00020002833) STX19 (ENSOARG00020002829) ARL13B (ENSOARG00020002758) PROS1 (ENSOARG00020002698) EPHA3 (ENSOARG00020002625) ENSOARG00020002616 C3orf38 (ENSOARG00020002608) ZNF654 (ENSOARG00020002568) CGGBP1 (ENSOARG00020002537) HTR1F (ENSOARG00020002525) ENSOARG00020002512 POU1F1 (ENSOARG00020002444) CHMP2B (ENSOARG00020002422) VGLL3 (ENSOARG00020002402) ENSOARG00020002390 Rambouillet Sheep MODERN SPECIES 19 EHBP1 (ENSOARG00020001291) TMEM17 (ENSOARG00020001441) B3GNT2 (ENSOARG00020001451) COMMD1 (ENSOARG00020001461) ENSOARG00020001479 FAM161A (ENSOARG00020001502) ENSOARG00020001550 ENSOARG00020001558 XPO1 (ENSOARG00020001587) USP34 (ENSOARG00020001682) ENSOARG00020002186 C2orf74 (ENSOARG00020002212) ENSOARG00020002228 ENSOARG00020002231 LRRTM4 (ENSOARG00020002254) ENSOARG00020002275 #22 ENSOARG00020002288 ENSOARG00020002295 ENSOARG00020002303 ENSOARG00020002315 ENSOARG00020002346 ENSOARG00020002369 #22 CTNNA2 (ENSOARG00020002405) LRRTM1 (ENSOARG00020002530) ENSOARG00020002555 ENSOARG00020002597 SUCLG1 (ENSOARG00020002604) DNAH6 (ENSOARG00020002647) TMSB10 (ENSOARG00020002756) KCMF1 (ENSOARG00020002774) TCF7L1 (ENSOARG00020002813) Rambouillet Sheep MODERN SPECIES PLCXD2 (ENSOARG00020005631) ENSOARG00020006053 ABHD10 (ENSOARG00020006068) TAGLN3 (ENSOARG00020006108) TMPRSS7 (ENSOARG00020006147) ENSOARG00020006308 GCSAM (ENSOARG00020000173) SLC9C1 (ENSOARG00020000247) CD200 (ENSOARG00020000423) BTLA (ENSOARG00020000440) ATG3 (ENSOARG00020000487) SLC35A5 (ENSOARG00020000518) CCDC80 (ENSOARG00020000563) ENSOARG00020000587 ENSOARG00020000602 ENSOARG00020000626 #22 GTPBP8 (ENSOARG00020000643) BOC (ENSOARG00020000752) SIDT1 (ENSOARG00020000920) USF3 (ENSOARG00020001164) ENSOARG00020001188 ATP6V1A (ENSOARG00020001247) GRAMD1C (ENSOARG00020001279) ZDHHC23 (ENSOARG00020001306) QTRT2 (ENSOARG00020001329) DRD3 (ENSOARG00020001358) TIGIT (ENSOARG00020001397) ZBTB20 (ENSOARG00020001417) GAP43 (ENSOARG00020001439) ENSOARG00020001450 LSAMP (ENSOARG00020001493) Rambouillet Sheep MODERN SPECIES 19 LIN7A (ENSOARG00020009053) #8 MYF5 (ENSOARG00020009026) #9 MYF6 (ENSOARG00020008989) #10 MYF6 (ENSOARG00020008943) #10 PTPRQ (ENSOARG00020008080) #11 PPP1R12A (ENSOARG00020005817) #13 PAWR (ENSOARG00020005665) #14 SYT1 (ENSOARG00020005626) #15 NAV3 (ENSOARG00020003813) #16 E2F7 (ENSOARG00020003529) #17 CSRP2 (ENSOARG00020003468) #18 ZDHHC17 (ENSOARG00020003403) #19 ENSOARG00020003381 BBS10 (ENSOARG00020003354) #21 OSBPL8 (ENSOARG00020003030) #20 ENSOARG00020002933 #22 PHLDA1 (ENSOARG00020002913) #23 KRR1 (ENSOARG00020002893) #24 GLIPR1 (ENSOARG00020002870) #25 ENSOARG00020002828 GLIPR1L1 (ENSOARG00020002811) #28 CAPS2 (ENSOARG00020002788) #29 KCNC2 (ENSOARG00020002747) #30 ATXN7L3B (ENSOARG00020002735) #32 ENSOARG00020002731 KDM8 (ENSOARG00020002713) NSMCE1 (ENSOARG00020002686) ENSOARG00020002666 TRHDE (ENSOARG00020002645) #33 ENSOARG00020002632 TPH2 (ENSOARG00020002610) #34 Suina ANCESTRAL SPECIES 4 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Pig MODERN SPECIES 13 ENSSSCG00000033766 AMN1 (ENSSSCG00000034407) ENSSSCG00000036980 RESF1 (ENSSSCG00000030616) BICD1 (ENSSSCG00000000531) FGD4 (ENSSSCG00000000530) DNM1L (ENSSSCG00000060628) YARS2 (ENSSSCG00000027429) PKP2 (ENSSSCG00000000528) ENSSSCG00000045848 SYT10 (ENSSSCG00000000527) ENSSSCG00000038998 ENSSSCG00000026719 OSBPL8 (ENSSSCG00000027503) #20 BBS10 (ENSSSCG00000000523) #21 NAP1L1 (ENSSSCG00000000522) #22 PHLDA1 (ENSSSCG00000044141) #23 KRR1 (ENSSSCG00000033524) #24 GLIPR1 (ENSSSCG00000000519) #25 ENSSSCG00000033294 GLIPR1L2 (ENSSSCG00000025915) #26 GLIPR1L1 (ENSSSCG00000022055) #28 CAPS2 (ENSSSCG00000000517) #29 KCNC2 (ENSSSCG00000000516) #30 ATXN7L3B (ENSSSCG00000054160) #32 TRHDE (ENSSSCG00000000515) #33 TPH2 (ENSSSCG00000021122) #34 TBC1D15 (ENSSSCG00000000512) #35 RAB21 (ENSSSCG00000059025) #36 TMEM19 (ENSSSCG00000000510) #37 THAP2 (ENSSSCG00000021270) Chacoan peccary MODERN SPECIES 871 ACSS3 (ENSCWAG00000010300) #7 LIN7A (ENSCWAG00000010238) #8 MYF5 (ENSCWAG00000010199) #9 MYF6 (ENSCWAG00000010168) #10 PTPRQ (ENSCWAG00000009402) #11 OTOGL (ENSCWAG00000007720) #12 PPP1R12A (ENSCWAG00000007564) #13 PAWR (ENSCWAG00000007454) #14 SYT1 (ENSCWAG00000007382) #15 NAV3 (ENSCWAG00000006671) #16 E2F7 (ENSCWAG00000006403) #17 CSRP2 (ENSCWAG00000006361) #18 ZDHHC17 (ENSCWAG00000006304) #19 OSBPL8 (ENSCWAG00000006143) #20 BBS10 (ENSCWAG00000006105) #21 NAP1L1 (ENSCWAG00000005937) #22 PHLDA1 (ENSCWAG00000005900) #23 ENSCWAG00000005880 KRR1 (ENSCWAG00000005721) #24 GLIPR1 (ENSCWAG00000005686) #25 GLIPR1L2 (ENSCWAG00000005529) #26 GLIPR1L1 (ENSCWAG00000005477) #28 CAPS2 (ENSCWAG00000005425) #29 KCNC2 (ENSCWAG00000005315) #30 ATXN7L3B (ENSCWAG00000005294) #32 ENSCWAG00000005273 ENSCWAG00000005255 TRHDE (ENSCWAG00000005179) #33 TPH2 (ENSCWAG00000005114) #34 ENSCWAG00000005084 TBC1D15 (ENSCWAG00000004952) #35 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Carnivora ANCESTRAL SPECIES 3 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Felidae ANCESTRAL SPECIES 2 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576.g #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Panthera ANCESTRAL SPECIES ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576.g #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Tiger MODERN SPECIES 285 ACSS3 (ENSPTIG00000013083) #7 LIN7A (ENSPTIG00000013465) #8 MYF5 (ENSPTIG00000013849) #9 MYF6 (ENSPTIG00000014009) #10 PTPRQ (ENSPTIG00000014182) #11 OTOGL (ENSPTIG00000017536) #12 PPP1R12A (ENSPTIG00000003820) #13 PAWR (ENSPTIG00000012722) #14 SYT1 (ENSPTIG00000013094) #15 NAV3 (ENSPTIG00000013673) #16 E2F7 (ENSPTIG00000016920) #17 CSRP2 (ENSPTIG00000019308) #18 ZDHHC17 (ENSPTIG00000019755) #19 OSBPL8 (ENSPTIG00000019983) #20 BBS10 (ENSPTIG00000020383) #21 NAP1L1 (ENSPTIG00000003186) #22 KRR1 (ENSPTIG00000009202) #24 GLIPR1 (ENSPTIG00000010519) #25 GLIPR1L2 (ENSPTIG00000011160) #26 GLIPR1L1 (ENSPTIG00000011807) #28 CAPS2 (ENSPTIG00000012593) #29 ENSPTIG00000013059 #30 ATXN7L3B (ENSPTIG00000004593) #32 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576.g #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 lion MODERN SPECIES 7 LIN7A (ENSPLOG00000003686) #8 MYF5 (ENSPLOG00000003675) #9 MYF6 (ENSPLOG00000003667) #10 PTPRQ (ENSPLOG00000003543) #11 OTOGL (ENSPLOG00000003151) #12 PPP1R12A (ENSPLOG00000002780) #13 PAWR (ENSPLOG00000002686) #14 SYT1 (ENSPLOG00000002662) #15 ENSPLOG00000002650 NAV3 (ENSPLOG00000002454) #16 E2F7 (ENSPLOG00000002314) #17 CSRP2 (ENSPLOG00000002279) #18 ZDHHC17 (ENSPLOG00000002249) #19 OSBPL8 (ENSPLOG00000002092) #20 BBS10 (ENSPLOG00000002053) #21 NAP1L1 (ENSPLOG00000001982) #22 PHLDA1 (ENSPLOG00000001933) #23 KRR1 (ENSPLOG00000001901) #24 GLIPR1 (ENSPLOG00000001884) #25 GLIPR1L2 (ENSPLOG00000001854) #26 GLIPR1L1 (ENSPLOG00000001832) #28 CAPS2 (ENSPLOG00000001806) #29 KCNC2 (ENSPLOG00000001773) #30 ENSPLOG00000001747 #32 ENSPLOG00000001740 ENSPLOG00000001713 #33 TPH2 (ENSPLOG00000001693) #34 TBC1D15 (ENSPLOG00000001591) #35 RAB21 (ENSPLOG00000001559) #36 TMEM19 (ENSPLOG00000001540) #37 THAP2 (ENSPLOG00000001519) leopard MODERN SPECIES 27 MYF6 (ENSPPRG00000003909) #10 PTPRQ (ENSPPRG00000005300) #11 OTOGL (ENSPPRG00000007761) #12 PPP1R12A (ENSPPRG00000012756) #13 ENSPPRG00000013642 PAWR (ENSPPRG00000013959) #14 SYT1 (ENSPPRG00000014210) #15 NAV3 (ENSPPRG00000022007) #16 E2F7 (ENSPPRG00000024442) #17 CSRP2 (ENSPPRG00000024205) #18 ZDHHC17 (ENSPPRG00000024071) #19 ENSPPRG00000023878 OSBPL8 (ENSPPRG00000023047) #20 BBS10 (ENSPPRG00000022774) #21 ENSPPRG00000000117 NAP1L1 (ENSPPRG00000001906) #22 ENSPPRG00000002277 KRR1 (ENSPPRG00000002897) #24 GLIPR1 (ENSPPRG00000003347) #25 GLIPR1L2 (ENSPPRG00000003609) #26 GLIPR1L1 (ENSPPRG00000004020) #28 CAPS2 (ENSPPRG00000004169) #29 ENSPPRG00000004904 #30 KCNC2 (ENSPPRG00000006532) #30 ENSPPRG00000014933 #32 TRHDE (ENSPPRG00000007335) #33 TPH2 (ENSPPRG00000007653) #34 TBC1D15 (ENSPPRG00000008565) #35 RAB21 (ENSPPRG00000009062) #36 TMEM19 (ENSPPRG00000009434) #37 THAP2 (ENSPPRG00000009476) Cat MODERN SPECIES 238 ACSS3 (ENSFCAG00000012992) #7 LIN7A (ENSFCAG00000015014) #8 MYF5 (ENSFCAG00000015011) #9 MYF6 (ENSFCAG00000015010) #10 PTPRQ (ENSFCAG00000026313) #11 OTOGL (ENSFCAG00000022141) #12 PPP1R12A (ENSFCAG00000027965) #13 PAWR (ENSFCAG00000026300) #14 SYT1 (ENSFCAG00000024865) #15 ENSFCAG00000048215 NAV3 (ENSFCAG00000013128) #16 E2F7 (ENSFCAG00000010756) #17 CSRP2 (ENSFCAG00000006548) #18 ZDHHC17 (ENSFCAG00000027034) #19 OSBPL8 (ENSFCAG00000027470) #20 NAP1L1 (ENSFCAG00000000279) #22 PHLDA1 (ENSFCAG00000032023) #23 ENSFCAG00000050261 KRR1 (ENSFCAG00000025788) #24 GLIPR1 (ENSFCAG00000005203) #25 GLIPR1L2 (ENSFCAG00000036590) #26 ENSFCAG00000041131 #28 ENSFCAG00000047626 CAPS2 (ENSFCAG00000040419) #29 KCNC2 (ENSFCAG00000024443) #30 ENSFCAG00000028757 #32 ENSFCAG00000050848 ENSFCAG00000046504 ENSFCAG00000033864 ENSFCAG00000052955 TRHDE (ENSFCAG00000009869) #33 Caniformia ANCESTRAL SPECIES 20 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Canidae ANCESTRAL SPECIES 12 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000005922.b.d.b.a.j ENSGT00390000018775 #24 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888.e.a ENSGT00940000153886.a.a.k ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.c.b.d ENSGT00400000023212 ENSGT00940000161408 Red fox MODERN SPECIES 9 LIN7A (ENSVVUG00000010554) #8 ENSVVUG00000010537 #9 MYF6 (ENSVVUG00000010529) #10 PTPRQ (ENSVVUG00000010403) #11 ENSVVUG00000010366 OTOGL (ENSVVUG00000010103) #12 PPP1R12A (ENSVVUG00000010043) #13 PAWR (ENSVVUG00000010028) #14 SYT1 (ENSVVUG00000009998) #15 NAV3 (ENSVVUG00000009882) #16 E2F7 (ENSVVUG00000009839) #17 CSRP2 (ENSVVUG00000009828) #18 ZDHHC17 (ENSVVUG00000009811) #19 OSBPL8 (ENSVVUG00000009692) #20 BBS10 (ENSVVUG00000009650) #21 NAP1L1 (ENSVVUG00000009610) #22 ENSVVUG00000009581 KRR1 (ENSVVUG00000009566) #24 OR4E1 (ENSVVUG00000009561) OR4E2 (ENSVVUG00000009557) ENSVVUG00000009540 METTL3 (ENSVVUG00000009513) TOX4 (ENSVVUG00000009505) RAB2B (ENSVVUG00000009502) CHD8 (ENSVVUG00000009444) SUPT16H (ENSVVUG00000009434) ENSVVUG00000009422 ENSVVUG00000009420 ENSVVUG00000009265 TMEM253 (ENSVVUG00000009250) ENSVVUG00000009241 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000158890.p.a.f ENSGT00940000157713.q #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00940000154612.m.a.g.a.b ENSGT00390000005922.b.d.b.a.j ENSGT00390000018775 #24 ENSGT00940000163058 ENSGT00940000163275 ENSGT00940000162245 ENSGT00550000075058 ENSGT00940000154888.e.a ENSGT00940000153886.a.a.k ENSGT00940000153649.B ENSGT00390000014495 ENSGT00520000055620.A ENSGT00940000153402.d ENSGT00400000023212 Dog MODERN SPECIES 6 PTPRQ (ENSCAFG00845008887) #11 OTOGL (ENSCAFG00845008423) #12 ENSCAFG00845008343 ENSCAFG00845008317 PPP1R12A (ENSCAFG00845007952) #13 PAWR (ENSCAFG00845007786) #14 SYT1 (ENSCAFG00845007651) #15 NAV3 (ENSCAFG00845007345) #16 ENSCAFG00845007259 E2F7 (ENSCAFG00845006897) #17 ENSCAFG00845006746 #18 ZDHHC17 (ENSCAFG00845006644) #19 OSBPL8 (ENSCAFG00845006249) #20 OSBPL8 (ENSCAFG00845006103) #21 ENSCAFG00845006055 NAP1L1 (ENSCAFG00845005932) #22 ENSCAFG00845005752 #23 ENSCAFG00845027430 ENSCAFG00845027179 #24 OR4E1 (ENSCAFG00845027061) OR4E2 (ENSCAFG00845026975) SALL2 (ENSCAFG00845026880) METTL3 (ENSCAFG00845026804) TOX4 (ENSCAFG00845026715) RAB2B (ENSCAFG00845026579) CHD8 (ENSCAFG00845026020) ENSCAFG00845025950 SUPT16H (ENSCAFG00845025698) RPGRIP1 (ENSCAFG00845025061) ENSCAFG00845024839 TMEM253 (ENSCAFG00845024658) Dingo MODERN SPECIES 277 PTPRQ (ENSCAFG00020015957) #11 OTOGL (ENSCAFG00020015840) #12 PPP1R12A (ENSCAFG00020015626) #13 PAWR (ENSCAFG00020015607) #14 SYT1 (ENSCAFG00020015603) #15 ENSCAFG00020015601 NAV3 (ENSCAFG00020015546) #16 ENSCAFG00020015535 ENSCAFG00020015528 ENSCAFG00020015522 #17 ENSCAFG00020015518 #17 CSRP2 (ENSCAFG00020015512) #18 ZDHHC17 (ENSCAFG00020015453) #19 OSBPL8 (ENSCAFG00020015356) #20 BBS10 (ENSCAFG00020015335) #21 NAP1L1 (ENSCAFG00020015328) #22 ENSCAFG00020015316 #23 ENSCAFG00020015310 ENSCAFG00020015296 KRR1 (ENSCAFG00020015286) #24 OR4E1 (ENSCAFG00020015285) OR4E2 (ENSCAFG00020015283) SALL2 (ENSCAFG00020015273) METTL3 (ENSCAFG00020015265) ENSCAFG00020015261 ENSCAFG00020015235 ENSCAFG00020015220 CHD8 (ENSCAFG00020014565) ENSCAFG00020014531 SUPT16H (ENSCAFG00020014529) RPGRIP1 (ENSCAFG00020014517) Caniformia_b ANCESTRAL SPECIES 18 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Ursidae ANCESTRAL SPECIES 13 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Giant Panda MODERN SPECIES 6 LIN7A (ENSAMEG00000013191) #8 MYF5 (ENSAMEG00000013193) #9 MYF6 (ENSAMEG00000027013) #10 PTPRQ (ENSAMEG00000013219) #11 OTOGL (ENSAMEG00000013267) #12 PPP1R12A (ENSAMEG00000013280) #13 PAWR (ENSAMEG00000013370) #14 SYT1 (ENSAMEG00000013376) #15 NAV3 (ENSAMEG00000006673) #16 ENSAMEG00000024301 E2F7 (ENSAMEG00000007247) #17 CSRP2 (ENSAMEG00000006632) #18 ZDHHC17 (ENSAMEG00000006600) #19 OSBPL8 (ENSAMEG00000006513) #20 BBS10 (ENSAMEG00000006510) #21 NAP1L1 (ENSAMEG00000006463) #22 PHLDA1 (ENSAMEG00000006460) #23 KRR1 (ENSAMEG00000006437) #24 GLIPR1 (ENSAMEG00000006427) #25 GLIPR1L2 (ENSAMEG00000006424) #26 GLIPR1L1 (ENSAMEG00000006420) #28 CAPS2 (ENSAMEG00000006378) #29 KCNC2 (ENSAMEG00000000555) #30 ENSAMEG00000030227 #31 ATXN7L3B (ENSAMEG00000018742) #32 TRHDE (ENSAMEG00000000316) #33 TPH2 (ENSAMEG00000000335) #34 TBC1D15 (ENSAMEG00000000408) #35 RAB21 (ENSAMEG00000000476) #36 TMEM19 (ENSAMEG00000000486) #37 THAP2 (ENSAMEG00000025964) Ursus ANCESTRAL SPECIES 23 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000190133 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Polar bear MODERN SPECIES 113 NAV3 (ENSUMAG00000021555) #16 ENSUMAG00000021519 #17 ENSUMAG00000021516 #17 CSRP2 (ENSUMAG00000021507) #18 ZDHHC17 (ENSUMAG00000021425) #19 OSBPL8 (ENSUMAG00000021330) #20 BBS10 (ENSUMAG00000021286) #21 NAP1L1 (ENSUMAG00000021259) #22 KRR1 (ENSUMAG00000021247) #24 GLIPR1 (ENSUMAG00000021245) #25 ENSUMAG00000021242 GLIPR1L2 (ENSUMAG00000021237) #26 GLIPR1L1 (ENSUMAG00000021232) #28 ENSUMAG00000021228 #29 KCNC2 (ENSUMAG00000021219) #30 ENSUMAG00000021205 #31 ATXN7L3B (ENSUMAG00000021202) #32 ENSUMAG00000021192 ENSUMAG00000021186 #33 TPH2 (ENSUMAG00000021170) #34 TBC1D15 (ENSUMAG00000021152) #35 RAB21 (ENSUMAG00000021145) #36 TMEM19 (ENSUMAG00000021142) #37 American black bear MODERN SPECIES 215 NAP1L1 (ENSUAMG00000018277) #22 PHLDA1 (ENSUAMG00000018276) #23 Mustelinae ANCESTRAL SPECIES 4 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215.b.a #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Ferret MODERN SPECIES 196 OTOGL (ENSMPUG00000017459) #12 PPP1R12A (ENSMPUG00000017460) #13 ENSMPUG00000017461 PAWR (ENSMPUG00000017462) #14 SYT1 (ENSMPUG00000017463) #15 ENSMPUG00000017464 NAV3 (ENSMPUG00000017465) #16 ENSMPUG00000017466 ENSMPUG00000017467 E2F7 (ENSMPUG00000017468) #17 CSRP2 (ENSMPUG00000017469) #18 ZDHHC17 (ENSMPUG00000017470) #19 ENSMPUG00000017471 OSBPL8 (ENSMPUG00000017472) #20 BBS10 (ENSMPUG00000017473) #21 NAP1L1 (ENSMPUG00000017474) #22 KRR1 (ENSMPUG00000017475) #24 GLIPR1 (ENSMPUG00000017476) #25 GLIPR1L2 (ENSMPUG00000017477) #26 ENSMPUG00000017478 #28 CAPS2 (ENSMPUG00000017479) #29 KCNC2 (ENSMPUG00000017480) #30 ENSMPUG00000017481 #32 TRHDE (ENSMPUG00000017482) #33 TPH2 (ENSMPUG00000017483) #34 TBC1D15 (ENSMPUG00000017484) #35 RAB21 (ENSMPUG00000017485) #36 TMEM19 (ENSMPUG00000017486) #37 ENSMPUG00000017487 ZFC3H1 (ENSMPUG00000017488) LGR5 (ENSMPUG00000017489) American mink DUPLICATION American mink MODERN SPECIES 192 NFX1 (ENSNVIG00000000524) CHMP5 (ENSNVIG00000000549) BAG1 (ENSNVIG00000000579) SPINK4 (ENSNVIG00000000604) B4GALT1 (ENSNVIG00000000613) SMU1 (ENSNVIG00000000627) ENSNVIG00000000642 APTX (ENSNVIG00000000655) TM215 (ENSNVIG00000000661) NDUFB6 (ENSNVIG00000000666) SMIM27 (ENSNVIG00000000676) TOPORS (ENSNVIG00000000674) RIGI (ENSNVIG00000000681) ACOC (ENSNVIG00000000721) ENSNVIG00000000807 ENSNVIG00000000813 #22 American mink DUPLICATION American mink MODERN SPECIES 22 MYF5 (ENSNVIG00000001283) #9 MYF6 (ENSNVIG00000001298) #10 PTPRQ (ENSNVIG00000001320) #11 OTOGL (ENSNVIG00000001579) #12 ENSNVIG00000001919 PPP1R12A (ENSNVIG00000001940) #13 PAWR (ENSNVIG00000002283) #14 SYT1 (ENSNVIG00000002313) #15 ENSNVIG00000002371 NAV3 (ENSNVIG00000002412) #16 E2F7 (ENSNVIG00000002695) #17 ENSNVIG00000002763 ##18 ZDHHC17 (ENSNVIG00000002801) #19 OSBPL8 (ENSNVIG00000002847) #20 BBS10 (ENSNVIG00000003073) #21 ENSNVIG00000003110 #22 ENSNVIG00000003475 PHLDA1 (ENSNVIG00000003490) #23 KRR1 (ENSNVIG00000003506) #24 GLIPR1 (ENSNVIG00000003537) #25 ENSNVIG00000003558 #26 GLIPR1L1 (ENSNVIG00000003573) #28 CAPS2 (ENSNVIG00000003600) #29 KCNC2 (ENSNVIG00000003636) #30 ATXN7L3B (ENSNVIG00000003667) #32 American mink MODERN SPECIES 47 DNAH12 (ENSNVIG00000022189) PDE12 (ENSNVIG00000022177) ARF4 (ENSNVIG00000022160) DENND6A (ENSNVIG00000022141) SLMAP (ENSNVIG00000021646) FLNB (ENSNVIG00000021302) DNSL3 (ENSNVIG00000021246) ABHD6 (ENSNVIG00000021220) RPP14 (ENSNVIG00000021200) HTD2 (ENSNVIG00000021195) PXK (ENSNVIG00000020975) PDHB (ENSNVIG00000020924) KCTD6 (ENSNVIG00000020909) ACOX2 (ENSNVIG00000020861) FAM107A (ENSNVIG00000020822) ENSNVIG00000020818 #22 ENSNVIG00000020805 CFAP20DC (ENSNVIG00000020597) FHIT (ENSNVIG00000020547) Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Equus ANCESTRAL SPECIES 21 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 Donkey MODERN SPECIES 11 ENSEASG00005024557 LIN7A (ENSEASG00005021265) #8 MYF5 (ENSEASG00005021266) #9 MYF6 (ENSEASG00005021268) #10 PTPRQ (ENSEASG00005021271) #11 OTOGL (ENSEASG00005021304) #12 PPP1R12A (ENSEASG00005021353) #13 PAWR (ENSEASG00005033077) #14 SYT1 (ENSEASG00005021375) #15 NAV3 (ENSEASG00005021551) #16 E2F7 (ENSEASG00005021935) #17 ENSEASG00005021936 #18 ZDHHC17 (ENSEASG00005021939) #19 OSBPL8 (ENSEASG00005021942) #20 BBS10 (ENSEASG00005021945) #21 NAP1L1 (ENSEASG00005021946) #22 PHLDA1 (ENSEASG00005027836) #23 KRR1 (ENSEASG00005021952) #24 GLIPR1 (ENSEASG00005024066) #25 GLIPR1L2 (ENSEASG00005021956) #26 GLIPR1L1 (ENSEASG00005032803) #28 CAPS2 (ENSEASG00005021957) #29 KCNC2 (ENSEASG00005021959) #30 ATXN7L3B (ENSEASG00005030269) #32 TRHDE (ENSEASG00005021964) #33 TPH2 (ENSEASG00005021971) #34 TBC1D15 (ENSEASG00005021976) #35 ENSEASG00005021978 #36 ENSEASG00005035672 ENSEASG00005035164 ENSEASG00005028004 Horse MODERN SPECIES 20 ACSS3 (ENSECAG00000008242) #7 LIN7A (ENSECAG00000002823) #8 MYF5 (ENSECAG00000020047) #10 PTPRQ (ENSECAG00000013221) #11 OTOGL (ENSECAG00000009954) #12 PPP1R12A (ENSECAG00000020406) #13 PAWR (ENSECAG00000019505) #14 SYT1 (ENSECAG00000012832) #15 NAV3 (ENSECAG00000000121) #16 E2F7 (ENSECAG00000017963) #17 CSRP2 (ENSECAG00000015606) #18 ZDHHC17 (ENSECAG00000006626) #19 ENSECAG00000058140 OSBPL8 (ENSECAG00000015542) #20 BBS10 (ENSECAG00000015525) #21 NAP1L1 (ENSECAG00000000066) #22 ENSECAG00000001900 KRR1 (ENSECAG00000017498) #24 GLIPR1 (ENSECAG00000015687) #25 ENSECAG00000054232 ENSECAG00000053308 ENSECAG00000029754 GLIPR1L2 (ENSECAG00000049297) #26 GLIPR1L1 (ENSECAG00000015592) #28 CAPS2 (ENSECAG00000011231) #29 ENSECAG00000058423 KCNC2 (ENSECAG00000010280) #30 ENSECAG00000052654 ENSECAG00000053347 ENSECAG00000047922 TRHDE (ENSECAG00000009284) #33 Chiroptera ANCESTRAL SPECIES 4 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00940000167051 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Microchiroptera ANCESTRAL SPECIES 2 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.cb #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00940000167051 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Greater horseshoe bat MODERN SPECIES 1 ACSS3 (ENSRFEG00010010509) #7 LIN7A (ENSRFEG00010010463) #8 MYF5 (ENSRFEG00010010395) #9 MYF6 (ENSRFEG00010010368) #10 PTPRQ (ENSRFEG00010009562) #11 OTOGL (ENSRFEG00010007970) #12 PPP1R12A (ENSRFEG00010007686) #13 PAWR (ENSRFEG00010007574) #14 SYT1 (ENSRFEG00010007403) #15 NAV3 (ENSRFEG00010006668) #16 E2F7 (ENSRFEG00010006442) #17 CSRP2 (ENSRFEG00010006389) #18 ZDHHC17 (ENSRFEG00010006316) #19 OSBPL8 (ENSRFEG00010006253) #20 BBS10 (ENSRFEG00010004681) #21 NAP1L1 (ENSRFEG00010004645) #22 ENSRFEG00010004601 ENSRFEG00010004593 #24 GLIPR1 (ENSRFEG00010004575) #25 GLIPR1L2 (ENSRFEG00010004536) #26 GLIPR1L1 (ENSRFEG00010004502) #28 CAPS2 (ENSRFEG00010004481) #29 KCNC2 (ENSRFEG00010004462) #30 ENSRFEG00010004445 TRHDE (ENSRFEG00010004421) #33 TPH2 (ENSRFEG00010004392) #34 TBC1D15 (ENSRFEG00010004313) #35 RAB21 (ENSRFEG00010004244) #36 TMEM19 (ENSRFEG00010004224) #37 THAP2 (ENSRFEG00010004206) ZFC3H1 (ENSRFEG00010004111) Microbat MODERN SPECIES 946 MYF6 (ENSMLUG00000004940) #10 PTPRQ (ENSMLUG00000006091) #11 OTOGL (ENSMLUG00000005553) #12 PPP1R12A (ENSMLUG00000005477) #13 ENSMLUG00000005757 #14 SYT1 (ENSMLUG00000005752) #15 ENSMLUG00000027140 NAV3 (ENSMLUG00000010374) #16 E2F7 (ENSMLUG00000012116) #17 CSRP2 (ENSMLUG00000002384) #18 ZDHHC17 (ENSMLUG00000002375) #19 ENSMLUG00000003587 ENSMLUG00000029930 OSBPL8 (ENSMLUG00000005046) #20 BBS10 (ENSMLUG00000001850) #21 NAP1L1 (ENSMLUG00000029307) #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000153362.a #22 Hedgehog MODERN SPECIES 7857 NAP1L1 (ENSEEUG00000014024) #22 Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Glires ANCESTRAL SPECIES 4 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Lagomorpha ANCESTRAL SPECIES 113 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547.f.b #28 ENSGT00940000162547.f.a #28 ENSGT00940000162547.e #28 Rabbit MODERN SPECIES 15 ENSOCUG00000037584 PPP1R12A (ENSOCUG00000016701) #13 PAWR (ENSOCUG00000013722) #14 SYT1 (ENSOCUG00000014829) #15 ENSOCUG00000005148 NAV3 (ENSOCUG00000004936) #16 ENSOCUG00000025947 E2F7 (ENSOCUG00000004932) #17 ENSOCUG00000008330 #18 ENSOCUG00000027238 ZDHHC17 (ENSOCUG00000010401) #19 ENSOCUG00000028124 ENSOCUG00000032449 OSBPL8 (ENSOCUG00000010527) #20 BBS10 (ENSOCUG00000010522) #21 NAP1L1 (ENSOCUG00000013857) #22 PHLDA1 (ENSOCUG00000022950) #23 KRR1 (ENSOCUG00000003925) #24 GLIPR1 (ENSOCUG00000003921) #25 ENSOCUG00000031904 #28 ENSOCUG00000031541 #28 GLIPR1L2 (ENSOCUG00000003916) #26 ENSOCUG00000003909 #28 CAPS2 (ENSOCUG00000003896) #29 KCNC2 (ENSOCUG00000004467) #30 ENSOCUG00000024604 ENSOCUG00000031766 #32 ENSOCUG00000027980 TRHDE (ENSOCUG00000013309) #33 TPH2 (ENSOCUG00000015664) #34 TBC1D15 (ENSOCUG00000015650) #35 Rodentia ANCESTRAL SPECIES 5 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Rodentia_B ANCESTRAL SPECIES 3 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Kangaroo rat MODERN SPECIES 322 Acss3 (ENSDORG00000007288) #7 Lin7a (ENSDORG00000014355) #8 Myf5 (ENSDORG00000015437) #9 Myf6 (ENSDORG00000015435) #10 Ptprq (ENSDORG00000023208) #11 Otogl (ENSDORG00000028677) #12 Ppp1r12a (ENSDORG00000007157) #13 Pawr (ENSDORG00000029489) #14 Syt1 (ENSDORG00000003724) #15 Nav3 (ENSDORG00000011080) #16 ENSDORG00000026154 #17 Csrp2 (ENSDORG00000012441) #18 Zdhhc17 (ENSDORG00000012435) #19 Osbpl8 (ENSDORG00000000670) #20 Bbs10 (ENSDORG00000000668) #21 Nap1l1 (ENSDORG00000029138) #22 Phlda1 (ENSDORG00000027757) #23 ENSDORG00000023399 ENSDORG00000004614 #24 Glipr1 (ENSDORG00000004613) #25 ENSDORG00000027121 #26 Kcnc2 (ENSDORG00000000056) #30 Atxn7l3b (ENSDORG00000025438) #32 ENSDORG00000013399 #33 ENSDORG00000028797 #33 Tph2 (ENSDORG00000000779) #34 Tbc1d15 (ENSDORG00000003464) #35 ENSDORG00000004732 #36 Tmem19 (ENSDORG00000001530) #37 Thap2 (ENSDORG00000006270) ENSDORG00000028837 Myomorpha ANCESTRAL SPECIES 2 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Lesser Egyptian jerboa MODERN SPECIES 42 Ptprq (ENSJJAG00000017741) #11 Otogl (ENSJJAG00000019493) #12 Ppp1r12a (ENSJJAG00000023796) #13 Pawr (ENSJJAG00000018666) #14 Syt1 (ENSJJAG00000023399) #15 ENSJJAG00000022372 Nav3 (ENSJJAG00000012332) #16 ENSJJAG00000010552 E2f7 (ENSJJAG00000007878) #17 ENSJJAG00000005723 ENSJJAG00000014135 #18 ENSJJAG00000011419 #19 Osbpl8 (ENSJJAG00000024252) #20 Bbs10 (ENSJJAG00000023405) #21 ENSJJAG00000024142 Nap1l1 (ENSJJAG00000023205) #22 Phlda1 (ENSJJAG00000023924) #23 ENSJJAG00000023900 #24 ENSJJAG00000013157 #26 ENSJJAG00000023384 #25 ENSJJAG00000022416 #28 ENSJJAG00000009366 #29 Atxn7l3b (ENSJJAG00000002351) #32 ENSJJAG00000016750 ENSJJAG00000016174 Trhde (ENSJJAG00000016536) #33 Tph2 (ENSJJAG00000022511) #34 Tbc1d15 (ENSJJAG00000023876) #35 Rab21 (ENSJJAG00000020749) #36 ENSJJAG00000001969 Tmem19 (ENSJJAG00000011157) #37 Muroidea ANCESTRAL SPECIES 5 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1231 ENSNGAG00000017741 #22 Phlda1 (ENSNGAG00000004377) #23 Krr1 (ENSNGAG00000010798) #24 ENSNGAG00000019993 #25 Glipr1l2 (ENSNGAG00000011037) #26 ENSNGAG00000000682 #29 ENSNGAG00000006810 #30 Kcnc2 (ENSNGAG00000004605) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 1279 ENSNGAG00000021481 #22 Hmg20a (ENSNGAG00000021385) Lingo1 (ENSNGAG00000021247) Odf3l1 (ENSNGAG00000020969) ENSNGAG00000020737 Cspg4 (ENSNGAG00000019508) Snx33 (ENSNGAG00000019047) Imp3 (ENSNGAG00000017248) Snupn (ENSNGAG00000018735) Ptpn9 (ENSNGAG00000018454) Sin3a (ENSNGAG00000015781) Man2c1 (ENSNGAG00000015162) Neil1 (ENSNGAG00000012812) Commd4 (ENSNGAG00000007593) Muroidea_A ANCESTRAL SPECIES 22 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Cricetidae ANCESTRAL SPECIES 21 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116.y.b Cricetidae_B ANCESTRAL SPECIES 29 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116.y.b Northern American deer mouse MODERN SPECIES 9 Lin7a (ENSPEMG00000018576) #8 Myf5 (ENSPEMG00000018818) #9 Myf6 (ENSPEMG00000019751) #10 Ptprq (ENSPEMG00000019976) #11 Otogl (ENSPEMG00000005921) #12 Ppp1r12a (ENSPEMG00000011824) #13 Pawr (ENSPEMG00000031267) #14 Syt1 (ENSPEMG00000011853) #15 Brcc3dc (ENSPEMG00000012864) Nav3 (ENSPEMG00000003783) #16 E2f7 (ENSPEMG00000013555) #17 Csrp2 (ENSPEMG00000012653) #18 Zdhhc17 (ENSPEMG00000011257) #19 Osbpl8 (ENSPEMG00000008934) #20 Bbs10 (ENSPEMG00000031116) #21 Nap1l1 (ENSPEMG00000000646) #22 Phlda1 (ENSPEMG00000020277) #23 Krr1 (ENSPEMG00000020228) #24 Glipr1 (ENSPEMG00000020190) #25 ENSPEMG00000020146 #26 ENSPEMG00000020129 #28 ENSPEMG00000030311 #28 Caps2 (ENSPEMG00000020036) #29 Kcnc2 (ENSPEMG00000014606) #30 Atxn7l3b (ENSPEMG00000027167) #32 Trhde (ENSPEMG00000022340) #33 Tph2 (ENSPEMG00000021171) #34 Tbc1d15 (ENSPEMG00000014920) #35 Rab21 (ENSPEMG00000022641) #36 Tmem19 (ENSPEMG00000007783) #37 Thap2 (ENSPEMG00000004430) Prairie vole MODERN SPECIES 10 Lin7a (ENSMOCG00000021369) #8 Myf5 (ENSMOCG00000017847) #9 Myf6 (ENSMOCG00000015833) #10 Ptprq (ENSMOCG00000017842) #11 Otogl (ENSMOCG00000018409) #12 Ppp1r12a (ENSMOCG00000018418) #13 Pawr (ENSMOCG00000019570) #14 Syt1 (ENSMOCG00000012503) #15 ENSMOCG00000020523 Nav3 (ENSMOCG00000018391) #16 E2f7 (ENSMOCG00000021130) #17 Csrp2 (ENSMOCG00000007217) #18 Zdhhc17 (ENSMOCG00000002407) #19 Osbpl8 (ENSMOCG00000016633) #20 Bbs10 (ENSMOCG00000020010) #21 Nap1l1 (ENSMOCG00000012136) #22 Phlda1 (ENSMOCG00000021889) #23 Krr1 (ENSMOCG00000018635) #24 Glipr1 (ENSMOCG00000022141) #25 Glipr1l2 (ENSMOCG00000002411) #26 ENSMOCG00000013587 #28 Caps2 (ENSMOCG00000001012) #29 Kcnc2 (ENSMOCG00000022707) #30 Atxn7l3b (ENSMOCG00000007338) #32 ENSMOCG00000016064 Trhde (ENSMOCG00000000440) #33 Tph2 (ENSMOCG00000009489) #34 Tbc1d15 (ENSMOCG00000002280) #35 Rab21 (ENSMOCG00000017388) #36 Tmem19 (ENSMOCG00000019520) #37 Thap2 (ENSMOCG00000000145) Cricetinae ANCESTRAL SPECIES 22 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00940000167051 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 83 Ptprq (ENSCGRG00001017128) #11 Otogl (ENSCGRG00001018530) #12 Ppp1r12a (ENSCGRG00001017263) #13 Pawr (ENSCGRG00001011044) #14 ENSCGRG00001009057 ENSCGRG00001010398 Syt1 (ENSCGRG00001000069) #15 Brcc3dc (ENSCGRG00001009076) Nav3 (ENSCGRG00001022037) #16 ENSCGRG00001011762 E2f7 (ENSCGRG00001006568) #17 Csrp2 (ENSCGRG00001000844) #18 Zdhhc17 (ENSCGRG00001007660) #19 Osbpl8 (ENSCGRG00001021286) #20 Bbs10 (ENSCGRG00001010466) #21 ENSCGRG00001019257 #22 Phlda1 (ENSCGRG00001012896) #23 ENSCGRG00001005440 Krr1 (ENSCGRG00001005995) #24 Glipr1 (ENSCGRG00001017559) #25 ENSCGRG00001014628 #28 Caps2 (ENSCGRG00001012612) #29 Kcnc2 (ENSCGRG00001023381) #30 Atxn7l3b (ENSCGRG00001001803) #32 Trhde (ENSCGRG00001020946) #33 Tph2 (ENSCGRG00001012899) #34 Tbc1d15 (ENSCGRG00001016860) #35 Rab21 (ENSCGRG00001023612) #36 Tmem19 (ENSCGRG00001017163) #37 Thap2 (ENSCGRG00001011633) Zfc3h1 (ENSCGRG00001011660) Chinese hamster chok1gshd MODERN SPECIES 92 Mbp (ENSCGRG00001015943) Galr1 (ENSCGRG00001023113) Sall3 (ENSCGRG00001018203) Atp9b (ENSCGRG00001016871) Nfatc1 (ENSCGRG00001007565) ENSCGRG00001000659 Ctdp1 (ENSCGRG00001020255) Kcng2 (ENSCGRG00001009283) Slc66a2 (ENSCGRG00001024278) Hsbp1l1 (ENSCGRG00001020550) ENSCGRG00001014779 Rbfa (ENSCGRG00001022798) Adnp2 (ENSCGRG00001021111) Pard6g (ENSCGRG00001018816) ENSCGRG00001016310 ENSCGRG00001015031 #22 ENSCGRG00001013632 Sntg1 (ENSCGRG00001014187) Tmx3 (ENSCGRG00001021522) Rock1 (ENSCGRG00001014749) Usp14 (ENSCGRG00001006324) Thoc1 (ENSCGRG00001016464) Colec12 (ENSCGRG00001022701) ENSCGRG00001021932 ENSCGRG00001019910 Golden Hamster MODERN SPECIES 628 Lin7a (ENSMAUG00000007088) #8 Myf5 (ENSMAUG00000000933) #9 Myf6 (ENSMAUG00000019329) #10 Ptprq (ENSMAUG00000014282) #11 Otogl (ENSMAUG00000009930) #12 Ppp1r12a (ENSMAUG00000021712) #13 ENSMAUG00000008984 Syt1 (ENSMAUG00000012263) #15 ENSMAUG00000014224 Nav3 (ENSMAUG00000012505) #16 E2f7 (ENSMAUG00000010792) #17 Csrp2 (ENSMAUG00000018727) #18 Zdhhc17 (ENSMAUG00000021687) #19 Osbpl8 (ENSMAUG00000022092) #20 Bbs10 (ENSMAUG00000018240) #21 Nap1l1 (ENSMAUG00000016700) #22 ENSMAUG00000021584 Krr1 (ENSMAUG00000021283) #24 Glipr1l2 (ENSMAUG00000017252) #26 ENSMAUG00000022161 #28 Caps2 (ENSMAUG00000009850) #29 Kcnc2 (ENSMAUG00000010585) #30 Murinae ANCESTRAL SPECIES 22 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Rat MODERN SPECIES 17 Myf5 (ENSRNOG00000004768) #9 Myf6 (ENSRNOG00000004878) #10 Ptprq (ENSRNOG00000056915) #11 Otogl (ENSRNOG00000030316) #12 Ppp1r12a (ENSRNOG00000004925) #13 Pawr (ENSRNOG00000005917) #14 Syt1 (ENSRNOG00000006426) #15 Brcc3dc (ENSRNOG00000070196) Nav3 (ENSRNOG00000052157) #16 E2f7 (ENSRNOG00000026252) #17 Csrp2 (ENSRNOG00000003772) #18 Zdhhc17 (ENSRNOG00000003803) #19 Osbpl8 (ENSRNOG00000026962) #20 ENSRNOG00000062798 Bbs10 (ENSRNOG00000026913) #21 Nap1l1 (ENSRNOG00000003890) #22 Phlda1 (ENSRNOG00000004019) #23 Krr1 (ENSRNOG00000004035) #24 Glipr1 (ENSRNOG00000026644) #25 Glipr1l2 (ENSRNOG00000049053) #26 Glipr1l1 (ENSRNOG00000026634) #28 Caps2 (ENSRNOG00000026600) #29 Kcnc2 (ENSRNOG00000004077) #30 Atxn7l3b (ENSRNOG00000059744) #32 Trhde (ENSRNOG00000005278) #33 Tph2 (ENSRNOG00000003880) #34 Tbc1d15 (ENSRNOG00000003889) #35 Rab21 (ENSRNOG00000003923) #36 Tmem19 (ENSRNOG00000003985) #37 Thap2 (ENSRNOG00000066749) Zfc3h1 (ENSRNOG00000053060) Mus ANCESTRAL SPECIES 23 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Mus_A ANCESTRAL SPECIES 11 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00900000143684 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Mus_B ANCESTRAL SPECIES 10 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00390000000360.r.b.a.b ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162547.i.a #28 ENSGT00940000162357 #26 ENSGT00940000162547.i.b #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00900000143684 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Mouse MODERN SPECIES 1 Lin7a (ENSMUSG00000019906) #8 Myf5 (ENSMUSG00000000435) #9 Myf6 (ENSMUSG00000035923) #10 Ptprq (ENSMUSG00000035916) #11 Otogl (ENSMUSG00000091455) #12 Ppp1r12a (ENSMUSG00000019907) #13 Pawr (ENSMUSG00000035873) #14 Syt1 (ENSMUSG00000035864) #15 Brcc3dc (ENSMUSG00000112039) Nav3 (ENSMUSG00000020181) #16 E2f7 (ENSMUSG00000020185) #17 Csrp2 (ENSMUSG00000020186) #18 Zdhhc17 (ENSMUSG00000035798) #19 Osbpl8 (ENSMUSG00000020189) #20 Bbs10 (ENSMUSG00000035759) #21 Nap1l1 (ENSMUSG00000058799) #22 Phlda1 (ENSMUSG00000020205) #23 Krr1 (ENSMUSG00000063334) #24 Glipr1 (ENSMUSG00000056888) #25 Glipr1l1 (ENSMUSG00000020213) #28 Glipr1l2 (ENSMUSG00000020214) #26 Glipr1l3 (ENSMUSG00000112611) #28 Caps2 (ENSMUSG00000035694) #29 Kcnc2 (ENSMUSG00000035681) #30 Atxn7l3b (ENSMUSG00000074748) #32 Trhde (ENSMUSG00000050663) #33 Tph2 (ENSMUSG00000006764) #34 Tbc1d15 (ENSMUSG00000020130) #35 Rab21 (ENSMUSG00000020132) #36 Tmem19 (ENSMUSG00000069520) #37 Thap2 (ENSMUSG00000020137) Mus_C ANCESTRAL SPECIES 7 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162547.i.a #28 ENSGT00940000162357 #26 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00900000143684 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Steppe mouse MODERN SPECIES 2665 Osbpl8 (ENSMSIG00000026078) #20 Bbs10 (ENSMSIG00000026174) #21 Nap1l1 (ENSMSIG00000026178) #22 Phlda1 (ENSMSIG00000026240) #23 Krr1 (ENSMSIG00000026247) #24 Glipr1 (ENSMSIG00000026281) #25 spretus MODERN SPECIES 1 Acss3 (MGP_SPRETEiJ_G0016605) #7 Lin7a (MGP_SPRETEiJ_G0016606) #8 Myf5 (MGP_SPRETEiJ_G0016607) #9 Myf6 (MGP_SPRETEiJ_G0016608) #10 Ptprq (MGP_SPRETEiJ_G0016609) #11 Otogl (MGP_SPRETEiJ_G0016610) #12 Ppp1r12a (MGP_SPRETEiJ_G0016611) #13 Pawr (MGP_SPRETEiJ_G0016612) #14 Syt1 (MGP_SPRETEiJ_G0016613) #15 Nav3 (MGP_SPRETEiJ_G0016614) #16 E2f7 (MGP_SPRETEiJ_G0016615) #17 Csrp2 (MGP_SPRETEiJ_G0016616) #18 Zdhhc17 (MGP_SPRETEiJ_G0016617) #19 Osbpl8 (MGP_SPRETEiJ_G0016618) #20 Bbs10 (MGP_SPRETEiJ_G0016619) #21 Nap1l1 (MGP_SPRETEiJ_G0016620) #22 Phlda1 (MGP_SPRETEiJ_G0016621) #23 Krr1 (MGP_SPRETEiJ_G0016622) #24 Glipr1 (MGP_SPRETEiJ_G0016623) #25 MGP_SPRETEiJ_G0016624 #28 MGP_SPRETEiJ_G0016625 #26 MGP_SPRETEiJ_G0016626 #29 Kcnc2 (MGP_SPRETEiJ_G0016627) #30 Atxn7l3b (MGP_SPRETEiJ_G0016628) #32 MGP_SPRETEiJ_G0016629 Trhde (MGP_SPRETEiJ_G0016630) #33 Tph2 (MGP_SPRETEiJ_G0016631) #34 Tbc1d15 (MGP_SPRETEiJ_G0016632) #35 Rab21 (MGP_SPRETEiJ_G0016633) #36 Tmem19 (MGP_SPRETEiJ_G0016634) #37 Thap2 (MGP_SPRETEiJ_G0016635) Ryukyu mouse MODERN SPECIES 1 Acss3 (MGP_CAROLIEiJ_G0015783) #7 Lin7a (MGP_CAROLIEiJ_G0015784) #8 Myf5 (MGP_CAROLIEiJ_G0015785) #9 Myf6 (MGP_CAROLIEiJ_G0015786) #10 Ptprq (MGP_CAROLIEiJ_G0015787) #11 Otogl (MGP_CAROLIEiJ_G0015788) #12 Ppp1r12a (MGP_CAROLIEiJ_G0015789) #13 MGP_CAROLIEiJ_G0015790 #14 Syt1 (MGP_CAROLIEiJ_G0015791) #15 Nav3 (MGP_CAROLIEiJ_G0015792) #16 E2f7 (MGP_CAROLIEiJ_G0015793) #17 Csrp2 (MGP_CAROLIEiJ_G0015794) #18 Zdhhc17 (MGP_CAROLIEiJ_G0015795) #19 Osbpl8 (MGP_CAROLIEiJ_G0015796) #20 Bbs10 (MGP_CAROLIEiJ_G0015797) #21 Nap1l1 (MGP_CAROLIEiJ_G0015798) #22 Phlda1 (MGP_CAROLIEiJ_G0015799) #23 Krr1 (MGP_CAROLIEiJ_G0015800) #24 Glipr1 (MGP_CAROLIEiJ_G0015801) #25 Glipr1l2 (MGP_CAROLIEiJ_G0015802) #26 MGP_CAROLIEiJ_G0015803 #28 Caps2 (MGP_CAROLIEiJ_G0015804) #29 Kcnc2 (MGP_CAROLIEiJ_G0015805) #30 Atxn7l3b (MGP_CAROLIEiJ_G0015806) #32 MGP_CAROLIEiJ_G0015807 Trhde (MGP_CAROLIEiJ_G0015808) #33 Tph2 (MGP_CAROLIEiJ_G0015809) #34 Tbc1d15 (MGP_CAROLIEiJ_G0015810) #35 Rab21 (MGP_CAROLIEiJ_G0015811) #36 Tmem19 (MGP_CAROLIEiJ_G0015812) #37 Thap2 (MGP_CAROLIEiJ_G0015813) Shrew mouse MODERN SPECIES 22 Acss3 (MGP_PahariEiJ_G0031304) #7 Lin7a (MGP_PahariEiJ_G0031303) #8 Myf5 (MGP_PahariEiJ_G0031302) #9 Myf6 (MGP_PahariEiJ_G0031301) #10 Ptprq (MGP_PahariEiJ_G0031300) #11 MGP_PahariEiJ_G0031299 #12 Ppp1r12a (MGP_PahariEiJ_G0031298) #13 Pawr (MGP_PahariEiJ_G0031297) #14 Syt1 (MGP_PahariEiJ_G0031296) #15 MGP_PahariEiJ_G0031295 #16 E2f7 (MGP_PahariEiJ_G0031294) #17 Csrp2 (MGP_PahariEiJ_G0031293) #18 Zdhhc17 (MGP_PahariEiJ_G0031292) #19 Osbpl8 (MGP_PahariEiJ_G0031291) #20 Bbs10 (MGP_PahariEiJ_G0031290) #21 MGP_PahariEiJ_G0031289 #22 Phlda1 (MGP_PahariEiJ_G0031288) #23 Krr1 (MGP_PahariEiJ_G0031287) #24 Glipr1 (MGP_PahariEiJ_G0031286) #25 Glipr1l2 (MGP_PahariEiJ_G0031285) #26 MGP_PahariEiJ_G0031284 #28 Caps2 (MGP_PahariEiJ_G0031283) #29 Kcnc2 (MGP_PahariEiJ_G0031282) #30 Atxn7l3b (MGP_PahariEiJ_G0031281) #32 MGP_PahariEiJ_G0031280 Trhde (MGP_PahariEiJ_G0031279) #33 Tph2 (MGP_PahariEiJ_G0031278) #34 Tbc1d15 (MGP_PahariEiJ_G0031277) #35 Rab21 (MGP_PahariEiJ_G0031276) #36 Tmem19 (MGP_PahariEiJ_G0031275) #37 Thap2 (MGP_PahariEiJ_G0031274) Rodentia_A DUPLICATION Rodentia_A DUPLICATION Rodentia_A ANCESTRAL SPECIES ENSGT00940000153362.a.hb.a #22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153362.a.hb.a #22 Marmotini ANCESTRAL SPECIES ENSGT00940000153362.a.hb.a #22 Alpin marmot MODERN SPECIES 88 ENSMMMG00000021794 ENSMMMG00000021795 ENSMMMG00000021797 ENSMMMG00000021807 ENSMMMG00000021808 ENSMMMG00000021813 ENSMMMG00000021818 ENSMMMG00000021820 ENSMMMG00000021828 ENSMMMG00000021832 ENSMMMG00000021837 ENSMMMG00000021839 ENSMMMG00000021841 ZNF317 (ENSMMMG00000021845) ENSMMMG00000021853 ENSMMMG00000021863 #22 ENSMMMG00000021865 ENSMMMG00000021871 ENSMMMG00000021876 ENSMMMG00000021879 ENSMMMG00000021883 ENSMMMG00000021886 ENSMMMG00000021888 ENSMMMG00000021896 ENSMMMG00000021904 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153362.a.hb.a #22 Naked mole-rat female MODERN SPECIES 11 EAPP (ENSHGLG00000035378) SNX6 (ENSHGLG00000002236) CFL2 (ENSHGLG00000001467) ENSHGLG00000047884 BAZ1A (ENSHGLG00000007236) ENSHGLG00000000845 SRP54 (ENSHGLG00000002850) FAM177A1 (ENSHGLG00000045828) ENSHGLG00000002301 PRORP (ENSHGLG00000001372) ENSHGLG00000000520 NFKBIA (ENSHGLG00000034266) INSM2 (ENSHGLG00000049957) RALGAPA1 (ENSHGLG00000001193) ENSHGLG00000000511 ENSHGLG00000000299 #22 ENSHGLG00000046807 ENSHGLG00000041160 ENSHGLG00000001972 ENSHGLG00000045119 NKX2-1 (ENSHGLG00000035457) NKX2-8 (ENSHGLG00000001507) PAX9 (ENSHGLG00000002029) ENSHGLG00000001239 PPP1R3E (ENSHGLG00000040376) HOMEZ (ENSHGLG00000004788) BCL2L2 (ENSHGLG00000003433) ENSHGLG00000002927 SLC22A17 (ENSHGLG00000008654) EFS (ENSHGLG00000006932) IL25 (ENSHGLG00000018982) Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Hystricomorpha DUPLICATION Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 5 ENSHGLG00000041918 SRI (ENSHGLG00000004441) STEAP4 (ENSHGLG00000004401) ENSHGLG00000043620 ZNF804B (ENSHGLG00000004228) ENSHGLG00000033258 ENSHGLG00000004140 STEAP2 (ENSHGLG00000004036) CFAP69 (ENSHGLG00000014643) ENSHGLG00000050575 FAM237B (ENSHGLG00000032395) GTPBP10 (ENSHGLG00000014579) ENSHGLG00000048528 CLDN12 (ENSHGLG00000032369) CDK14 (ENSHGLG00000017316) ENSHGLG00000018138 #22 FZD1 (ENSHGLG00000016691) MTERF1 (ENSHGLG00000036452) AKAP9 (ENSHGLG00000016663) CYP51A1 (ENSHGLG00000016647) LRRD1 (ENSHGLG00000016636) KRIT1 (ENSHGLG00000014048) ANKIB1 (ENSHGLG00000013431) GATAD1 (ENSHGLG00000013060) PEX1 (ENSHGLG00000015029) FAM133B (ENSHGLG00000014949) ENSHGLG00000041177 CDK6 (ENSHGLG00000013892) SAMD9 (ENSHGLG00000037413) HEPACAM2 (ENSHGLG00000001360) VPS50 (ENSHGLG00000001554) Naked mole-rat female MODERN SPECIES 11 ENSHGLG00000009904 NEDD4 (ENSHGLG00000013198) PRTG (ENSHGLG00000009677) PYGO1 (ENSHGLG00000034526) DNAAF4 (ENSHGLG00000015787) ENSHGLG00000039905 CCPG1 (ENSHGLG00000012053) PIGB (ENSHGLG00000011247) ENSHGLG00000044214 RAB27A (ENSHGLG00000013717) RSL24D1 (ENSHGLG00000043923) ENSHGLG00000039454 UNC13C (ENSHGLG00000006768) WDR72 (ENSHGLG00000010353) ENSHGLG00000001410 ENSHGLG00000015901 #22 ONECUT1 (ENSHGLG00000046426) FAM214A (ENSHGLG00000017408) ARPP19 (ENSHGLG00000038794) MYO5A (ENSHGLG00000013836) MYO5C (ENSHGLG00000012305) GNB5 (ENSHGLG00000012622) ENSHGLG00000036414 MAPK6 (ENSHGLG00000018577) LEO1 (ENSHGLG00000017678) TMOD3 (ENSHGLG00000016880) ENSHGLG00000034762 ENSHGLG00000040154 TMOD2 (ENSHGLG00000018596) ENSHGLG00000014402 SCG3 (ENSHGLG00000019449) Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000032214 PDS5A (ENSHGLG00000012061) ENSHGLG00000034269 N4BP2 (ENSHGLG00000009629) RHOH (ENSHGLG00000046114) CHRNA9 (ENSHGLG00000018575) ENSHGLG00000049819 ENSHGLG00000016914 ENSHGLG00000047972 ENSHGLG00000050238 ENSHGLG00000048378 NSUN7 (ENSHGLG00000016415) APBB2 (ENSHGLG00000010525) UCHL1 (ENSHGLG00000010549) ENSHGLG00000008342 ENSHGLG00000039353 #22 ENSHGLG00000048153 ENSHGLG00000042479 ENSHGLG00000019326 ENSHGLG00000015611 BEND4 (ENSHGLG00000015366) ENSHGLG00000038031 SHISA3 (ENSHGLG00000039110) ENSHGLG00000018277 ENSHGLG00000042309 ENSHGLG00000015230 ENSHGLG00000015195 ENSHGLG00000018558 ENSHGLG00000021380 ENSHGLG00000044739 ENSHGLG00000018524 Naked mole-rat female MODERN SPECIES 8 SYT1 (ENSHGLG00000047548) #15 ENSHGLG00000042592 ENSHGLG00000010015 NAV3 (ENSHGLG00000012083) #16 E2F7 (ENSHGLG00000006491) #17 ENSHGLG00000008206 #18 ENSHGLG00000009233 #19 ENSHGLG00000004489 ENSHGLG00000044176 ENSHGLG00000008641 ENSHGLG00000033319 ENSHGLG00000039577 ENSHGLG00000008111 #20 BBS10 (ENSHGLG00000041362) #21 ENSHGLG00000046259 ENSHGLG00000014189 #22 ENSHGLG00000045931 KRR1 (ENSHGLG00000004459) #24 GLIPR1 (ENSHGLG00000037317) #25 ENSHGLG00000037384 ENSHGLG00000049301 CAPS2 (ENSHGLG00000043754) #29 KCNC2 (ENSHGLG00000008212) #30 ATXN7L3B (ENSHGLG00000020493) #32 ENSHGLG00000046516 TRHDE (ENSHGLG00000008926) #33 TPH2 (ENSHGLG00000009477) #34 TBC1D15 (ENSHGLG00000012156) #35 ENSHGLG00000032222 #36 ENSHGLG00000012420 ENSHGLG00000012561 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Guinea pig MODERN SPECIES 9 ACSS3 (ENSCPOG00000003451) #7 LIN7A (ENSCPOG00000001373) #8 MYF5 (ENSCPOG00000007766) #9 MYF6 (ENSCPOG00000030745) #10 PTPRQ (ENSCPOG00000031105) #11 OTOGL (ENSCPOG00000022231) #12 PPP1R12A (ENSCPOG00000004019) #13 PAWR (ENSCPOG00000002469) #14 SYT1 (ENSCPOG00000002054) #15 NAV3 (ENSCPOG00000015431) #16 E2F7 (ENSCPOG00000007375) #17 CSRP2 (ENSCPOG00000031460) #18 ZDHHC17 (ENSCPOG00000012534) #19 OSBPL8 (ENSCPOG00000001130) #20 BBS10 (ENSCPOG00000038158) #21 NAP1L1 (ENSCPOG00000019420) #22 PHLDA1 (ENSCPOG00000003245) #23 KRR1 (ENSCPOG00000014353) #24 GLIPR1 (ENSCPOG00000014351) #25 ENSCPOG00000013925 #26 ENSCPOG00000011301 GLIPR1L1 (ENSCPOG00000011726) #28 CAPS2 (ENSCPOG00000011709) #29 KCNC2 (ENSCPOG00000003474) #30 ATXN7L3B (ENSCPOG00000040398) #32 TRHDE (ENSCPOG00000007500) #33 ENSCPOG00000035901 #33 TPH2 (ENSCPOG00000005406) #34 TBC1D15 (ENSCPOG00000004522) #35 RAB21 (ENSCPOG00000004741) #36 TMEM19 (ENSCPOG00000025019) #37 Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Long-tailed chinchilla MODERN SPECIES 112 MYF5 (ENSCLAG00000014410) #9 MYF6 (ENSCLAG00000013875) #10 PTPRQ (ENSCLAG00000012232) #11 OTOGL (ENSCLAG00000006526) #12 PPP1R12A (ENSCLAG00000006399) #13 PAWR (ENSCLAG00000008196) #14 SYT1 (ENSCLAG00000004862) #15 ENSCLAG00000005685 NAV3 (ENSCLAG00000012036) #16 E2F7 (ENSCLAG00000007164) #17 CSRP2 (ENSCLAG00000008899) #18 ZDHHC17 (ENSCLAG00000011124) #19 ENSCLAG00000017859 OSBPL8 (ENSCLAG00000010204) #20 BBS10 (ENSCLAG00000007902) #21 ENSCLAG00000005333 #22 PHLDA1 (ENSCLAG00000006934) #23 KRR1 (ENSCLAG00000005111) #24 GLIPR1 (ENSCLAG00000006364) #25 GLIPR1L2 (ENSCLAG00000006004) #26 GLIPR1L1 (ENSCLAG00000005153) #28 ENSCLAG00000004453 #29 KCNC2 (ENSCLAG00000009275) #30 ATXN7L3B (ENSCLAG00000017725) #32 TRHDE (ENSCLAG00000005841) #33 TPH2 (ENSCLAG00000005112) #34 TBC1D15 (ENSCLAG00000008349) #35 RAB21 (ENSCLAG00000014056) #36 ENSCLAG00000015447 #37 THAP2 (ENSCLAG00000013769) ZFC3H1 (ENSCLAG00000007646) Degu MODERN SPECIES 45 PTPRQ (ENSODEG00000007761) #11 OTOGL (ENSODEG00000007895) #12 PPP1R12A (ENSODEG00000009363) #13 ENSODEG00000019636 PAWR (ENSODEG00000008160) #14 ENSODEG00000007440 SYT1 (ENSODEG00000008387) #15 ENSODEG00000007970 NAV3 (ENSODEG00000010398) #16 ENSODEG00000008575 #17 CSRP2 (ENSODEG00000008449) #18 ZDHHC17 (ENSODEG00000010670) #19 ENSODEG00000007367 OSBPL8 (ENSODEG00000007618) #20 BBS10 (ENSODEG00000007380) #21 ENSODEG00000007344 #22 PHLDA1 (ENSODEG00000019456) #23 ENSODEG00000006609 ENSODEG00000019616 ENSODEG00000007152 #24 GLIPR1 (ENSODEG00000008406) #25 ENSODEG00000019533 TMTC1 (ENSODEG00000007589) ENSODEG00000006579 ERGIC2 (ENSODEG00000007081) FAR2 (ENSODEG00000007215) ENSODEG00000007549 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153362.a.hb.b.b #22 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES ELFN1 (ENSHGLG00000013940) PSMG3 (ENSHGLG00000050465) TMEM184A (ENSHGLG00000018951) MAFK (ENSHGLG00000044774) INTS1 (ENSHGLG00000015162) MICALL2 (ENSHGLG00000014977) UNCX (ENSHGLG00000013399) ZFAND2A (ENSHGLG00000036206) GPER1 (ENSHGLG00000007436) GPR146 (ENSHGLG00000007107) C7orf50 (ENSHGLG00000042404) CYP2W1 (ENSHGLG00000010718) COX19 (ENSHGLG00000042958) ADAP1 (ENSHGLG00000045392) ENSHGLG00000006985 ENSHGLG00000035428 #22 SUN1 (ENSHGLG00000009193) ENSHGLG00000034562 ENSHGLG00000046473 DNAAF5 (ENSHGLG00000013235) PRKAR1B (ENSHGLG00000014913) PDGFA (ENSHGLG00000048877) ENSHGLG00000017258 ENSHGLG00000037489 ENSHGLG00000015772 ENSHGLG00000015548 ENSHGLG00000012970 ENSHGLG00000037255 ENSHGLG00000013408 ENSHGLG00000007740 ENSHGLG00000047366 Naked mole-rat female MODERN SPECIES 26 RCC1 (ENSHGLG00000010563) ENSHGLG00000010380 ENSHGLG00000032594 RAB42 (ENSHGLG00000010181) ENSHGLG00000049224 GMEB1 (ENSHGLG00000012929) ENSHGLG00000009933 OPRD1 (ENSHGLG00000011866) EPB41 (ENSHGLG00000012118) TMEM200B (ENSHGLG00000049796) SRSF4 (ENSHGLG00000011842) MECR (ENSHGLG00000012855) ENSHGLG00000014761 ENSHGLG00000045877 ENSHGLG00000034685 ENSHGLG00000040884 #22 ENSHGLG00000018463 LAPTM5 (ENSHGLG00000011268) SDC3 (ENSHGLG00000033191) Pum1 (ENSHGLG00000013819) NKAIN1 (ENSHGLG00000036969) ENSHGLG00000016092 ENSHGLG00000019323 FABP3 (ENSHGLG00000010081) SERINC2 (ENSHGLG00000011176) TINAGL1 (ENSHGLG00000012932) HCRTR1 (ENSHGLG00000013949) PEF1 (ENSHGLG00000043182) COL16A1 (ENSHGLG00000012914) ADGRB2 (ENSHGLG00000019091) SPOCD1 (ENSHGLG00000017620) Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000044103 ENSHGLG00000049773 ENSHGLG00000032190 ENSHGLG00000002363 ENSHGLG00000007558 ENSHGLG00000019577 ENSHGLG00000019365 ITGB7 (ENSHGLG00000005533) ZNF740 (ENSHGLG00000042228) CSAD (ENSHGLG00000003514) SOAT2 (ENSHGLG00000001722) IGFBP6 (ENSHGLG00000003596) SPRYD3 (ENSHGLG00000003437) ENSHGLG00000002678 ENSHGLG00000045323 ENSHGLG00000002516 #22 ENSHGLG00000019972 ENSHGLG00000001537 ENSHGLG00000037005 Krt8 (ENSHGLG00000001413) KRT78 (ENSHGLG00000000919) KRT79 (ENSHGLG00000000843) KRT4 (ENSHGLG00000001911) KRT76 (ENSHGLG00000001572) ENSHGLG00000034753 KRT1 (ENSHGLG00000001162) KRT73 (ENSHGLG00000001292) KRT72 (ENSHGLG00000001158) KRT74 (ENSHGLG00000001080) KRT71 (ENSHGLG00000000999) KRT5 (ENSHGLG00000000726) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153362.a.hb.b.b #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153362.a.hb.b.b #22 Long-tailed chinchilla MODERN SPECIES 239 ENSCLAG00000007776 ENSCLAG00000007828 ##27 PLXNB1 (ENSCLAG00000009647) CCDC51 (ENSCLAG00000009171) TMA7 (ENSCLAG00000009744) ATRIP (ENSCLAG00000007685) ENSCLAG00000008547 TREX1 (ENSCLAG00000008862) PFKFB4 (ENSCLAG00000009959) ENSCLAG00000012526 UQCRC1 (ENSCLAG00000011523) ENSCLAG00000009195 #22 SLC26A6 (ENSCLAG00000011172) CELSR3 (ENSCLAG00000015824) NCKIPSD (ENSCLAG00000010729) IP6K2 (ENSCLAG00000016270) PRKAR2A (ENSCLAG00000013198) SLC25A20 (ENSCLAG00000006666) ARIH2 (ENSCLAG00000007056) P4HTM (ENSCLAG00000012640) WDR6 (ENSCLAG00000013367) DALRD3 (ENSCLAG00000010911) IMPDH2 (ENSCLAG00000010876) NDUFAF3 (ENSCLAG00000010367) QRICH1 (ENSCLAG00000011484) QARS1 (ENSCLAG00000009982) USP19 (ENSCLAG00000009469) Sciuridae ANCESTRAL SPECIES 14 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775.ab #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Marmotini ANCESTRAL SPECIES 4 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775.ab #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 11 PPFIA2 (ENSMMMG00000001244) ACSS3 (ENSMMMG00000001391) #7 LIN7A (ENSMMMG00000001429) #8 MYF5 (ENSMMMG00000001446) #9 MYF6 (ENSMMMG00000001463) #10 PTPRQ (ENSMMMG00000001485) #11 OTOGL (ENSMMMG00000001599) #12 PPP1R12A (ENSMMMG00000001751) #13 SYT1 (ENSMMMG00000001991) #15 NAV3 (ENSMMMG00000002035) #16 E2F7 (ENSMMMG00000002119) #17 ENSMMMG00000002164 #18 ZDHHC17 (ENSMMMG00000002185) #19 OSBPL8 (ENSMMMG00000002240) #20 BBS10 (ENSMMMG00000002273) #21 ENSMMMG00000002289 #22 PHLDA1 (ENSMMMG00000002474) #23 KRR1 (ENSMMMG00000002493) #24 GLIPR1 (ENSMMMG00000002546) #25 GLIPR1L2 (ENSMMMG00000002582) #26 GLIPR1L1 (ENSMMMG00000002592) #28 CAPS2 (ENSMMMG00000002609) #29 ENSMMMG00000002677 KCNC2 (ENSMMMG00000002683) #30 ENSMMMG00000002698 ATXN7L3B (ENSMMMG00000002707) #32 ENSMMMG00000002714 TRHDE (ENSMMMG00000002731) #33 TPH2 (ENSMMMG00000002761) #34 TBC1D15 (ENSMMMG00000002788) #35 RAB21 (ENSMMMG00000002825) #36 Alpin marmot MODERN SPECIES 199 ENSMMMG00000005930 #22 Marmotini_b ANCESTRAL SPECIES 3 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.hb.b #22 ENSGT00440000039564.b #23 ENSGT00390000018775.ab #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00390000001376 ENSGT00390000008294.e.b.a.b ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429.x #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Squirrel MODERN SPECIES 168 NAV3 (ENSSTOG00000012725) #16 E2F7 (ENSSTOG00000007887) #17 CSRP2 (ENSSTOG00000010876) #18 ZDHHC17 (ENSSTOG00000010869) #19 OSBPL8 (ENSSTOG00000011866) #20 BBS10 (ENSSTOG00000011855) #21 NAP1L1 (ENSSTOG00000003046) #22 PHLDA1 (ENSSTOG00000020332) #23 KRR1 (ENSSTOG00000003620) #24 GLIPR1 (ENSSTOG00000003613) #25 ENSSTOG00000024468 #26 GLIPR1L1 (ENSSTOG00000020403) #28 ENSSTOG00000003438 #29 ENSSTOG00000028374 KCNC2 (ENSSTOG00000004842) #30 ATXN7L3B (ENSSTOG00000023624) #32 TRHDE (ENSSTOG00000003761) #33 TPH2 (ENSSTOG00000002663) #34 TBC1D15 (ENSSTOG00000002639) #35 RAB21 (ENSSTOG00000011609) #36 TMEM19 (ENSSTOG00000002706) #37 THAP2 (ENSSTOG00000002694) Eurasian red squirrel MODERN SPECIES 14 MYF5 (ENSSVLG00005025239) #9 MYF6 (ENSSVLG00005025222) #10 PTPRQ (ENSSVLG00005025041) #11 OTOGL (ENSSVLG00005024601) #12 PPP1R12A (ENSSVLG00005024407) #13 PAWR (ENSSVLG00005024360) #14 SYT1 (ENSSVLG00005024299) #15 NAV3 (ENSSVLG00005023837) #16 ENSSVLG00005023728 E2F7 (ENSSVLG00005023615) #17 ENSSVLG00005023521 #18 ZDHHC17 (ENSSVLG00005023480) #19 OSBPL8 (ENSSVLG00005023307) #20 ENSSVLG00005023266 BBS10 (ENSSVLG00005023257) #21 NAP1L1 (ENSSVLG00005023160) #22 ENSSVLG00005023108 KRR1 (ENSSVLG00005023069) #24 GLIPR1 (ENSSVLG00005023023) #25 ENSSVLG00005023001 GLIPR1L2 (ENSSVLG00005022916) #26 GLIPR1L1 (ENSSVLG00005022861) #28 CAPS2 (ENSSVLG00005022512) #29 KCNC2 (ENSSVLG00005022353) #30 ATXN7L3B (ENSSVLG00005022316) #32 ENSSVLG00005022278 TRHDE (ENSSVLG00005022145) #33 TPH2 (ENSSVLG00005021996) #34 TBC1D15 (ENSSVLG00005021829) #35 ENSSVLG00005021775 RAB21 (ENSSVLG00005021742) #36 Rodentia_A ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Sciuridae ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Marmotini ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Marmotini_b ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Arctic ground squirrel MODERN SPECIES 81 ENSUPAG00010021241 ENSUPAG00010021216 OCLN (ENSUPAG00010021180) MARVELD2 (ENSUPAG00010021167) RAD17 (ENSUPAG00010021136) ENSUPAG00010021125 CCDC125 (ENSUPAG00010021103) CDK7 (ENSUPAG00010021083) MRPS36 (ENSUPAG00010021078) CENPH (ENSUPAG00010021074) CCNB1 (ENSUPAG00010021060) SLC30A5 (ENSUPAG00010021029) PIK3R1 (ENSUPAG00010020989) ENSUPAG00010020950 #22 CD180 (ENSUPAG00010020935) MAST4 (ENSUPAG00010020888) ENSUPAG00010020848 ERBIN (ENSUPAG00010019927) NLN (ENSUPAG00010019910) SGTB (ENSUPAG00010019906) TRAPPC13 (ENSUPAG00010019866) TRIM23 (ENSUPAG00010019824) PPWD1 (ENSUPAG00010019815) CENPK (ENSUPAG00010019808) ADAMTS6 (ENSUPAG00010019775) CWC27 (ENSUPAG00010019767) SREK1IP1 (ENSUPAG00010019763) SHISAL2B (ENSUPAG00010019757) RGS7BP (ENSUPAG00010019751) Hystricomorpha ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000153362.a.ib #22 Degu MODERN SPECIES 212 PCDH19 (ENSODEG00000002228) ENSODEG00000002249 #22 ENSODEG00000002256 ENSODEG00000018903 ENSODEG00000002279 TNMD (ENSODEG00000002287) TSPAN6 (ENSODEG00000002305) SRPX2 (ENSODEG00000001636) SYTL4 (ENSODEG00000001791) CSTF2 (ENSODEG00000002059) NOX1 (ENSODEG00000002168) XKRX (ENSODEG00000002306) ENSODEG00000002348 ENSODEG00000002396 ENSODEG00000002456 ENSODEG00000018857 DRP2 (ENSODEG00000002550) Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000018243 CDKN2AIP (ENSHGLG00000034491) ING2 (ENSHGLG00000009825) RWDD4 (ENSHGLG00000017188) TRAPPC11 (ENSHGLG00000015695) STOX2 (ENSHGLG00000016104) ENPP6 (ENSHGLG00000018912) IRF2 (ENSHGLG00000034854) ENSHGLG00000032894 PRIMPOL (ENSHGLG00000003784) ENSHGLG00000005399 ACSL1 (ENSHGLG00000003274) ENSHGLG00000046299 HELT (ENSHGLG00000004604) ENSHGLG00000046242 ENSHGLG00000037314 #22 SLC25A4 (ENSHGLG00000039769) CFAP97 (ENSHGLG00000003876) ENSHGLG00000005343 ENSHGLG00000036806 ENSHGLG00000049813 ANKRD37 (ENSHGLG00000038362) ENSHGLG00000003584 C4orf47 (ENSHGLG00000004232) ENSHGLG00000007542 PDLIM3 (ENSHGLG00000014907) ENSHGLG00000037742 SORBS2 (ENSHGLG00000018081) TLR3 (ENSHGLG00000007824) ENSHGLG00000013878 FAM149A (ENSHGLG00000015518) Primates ANCESTRAL SPECIES 6 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Tarsier MODERN SPECIES 5311 ENSTSYG00000032845 NAP1L1 (ENSTSYG00000004487) #22 Simiiformes ANCESTRAL SPECIES 4 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Catarrhini ANCESTRAL SPECIES 4 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Hominoidea ANCESTRAL SPECIES 5 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00880000138028.b.b.b ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Gibbon MODERN SPECIES MYF5 (ENSNLEG00000005207) #9 MYF6 (ENSNLEG00000032583) #10 PTPRQ (ENSNLEG00000005154) #11 OTOGL (ENSNLEG00000005115) #12 PPP1R12A (ENSNLEG00000005041) #13 PAWR (ENSNLEG00000005035) #14 SYT1 (ENSNLEG00000004995) #15 NAV3 (ENSNLEG00000004917) #16 E2F7 (ENSNLEG00000004897) #17 ENSNLEG00000028737 ENSNLEG00000004885 #18 ZDHHC17 (ENSNLEG00000004841) #19 OSBPL8 (ENSNLEG00000004750) #20 BBS10 (ENSNLEG00000004748) #21 ENSNLEG00000031630 NAP1L1 (ENSNLEG00000004682) #22 ENSNLEG00000004680 #23 KRR1 (ENSNLEG00000004647) #24 GLIPR1 (ENSNLEG00000004629) #25 GLIPR1L2 (ENSNLEG00000004622) #26 GLIPR1L1 (ENSNLEG00000004609) #28 CAPS2 (ENSNLEG00000004582) #29 KCNC2 (ENSNLEG00000004570) #30 ATXN7L3B (ENSNLEG00000018759) #32 TRHDE (ENSNLEG00000004517) #33 TPH2 (ENSNLEG00000004490) #34 TBC1D15 (ENSNLEG00000004430) #35 RAB21 (ENSNLEG00000004425) #36 TMEM19 (ENSNLEG00000004410) #37 THAP2 (ENSNLEG00000004398) ZFC3H1 (ENSNLEG00000004372) Hominidae ANCESTRAL SPECIES 4 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00880000138028.b.b.b ENSGT00940000153362.a #22 ENSGT00910000147072 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Orangutan MODERN SPECIES 3 PTPRQ (ENSPPYG00000041069) #11 OTOGL (ENSPPYG00000004797) #12 PPP1R12A (ENSPPYG00000004796) #13 ENSPPYG00000025853 PAWR (ENSPPYG00000004795) #14 SYT1 (ENSPPYG00000004794) #15 ENSPPYG00000004793 NAV3 (ENSPPYG00000004792) #16 E2F7 (ENSPPYG00000004791) #17 ENSPPYG00000031243 #18 ZDHHC17 (ENSPPYG00000004789) #19 OSBPL8 (ENSPPYG00000004788) #20 ENSPPYG00000037353 BBS10 (ENSPPYG00000004787) #21 ENSPPYG00000032561 NAP1L1 (ENSPPYG00000004786) #22 ENSPPYG00000038710 PHLDA1 (ENSPPYG00000041713) #23 KRR1 (ENSPPYG00000004785) #24 GLIPR1 (ENSPPYG00000004784) #25 GLIPR1L2 (ENSPPYG00000004783) #26 GLIPR1L1 (ENSPPYG00000004782) #28 CAPS2 (ENSPPYG00000004781) #29 KCNC2 (ENSPPYG00000004780) #30 ENSPPYG00000041736 ENSPPYG00000037294 #31 TRHDE (ENSPPYG00000004779) #33 TPH2 (ENSPPYG00000004777) #34 TBC1D15 (ENSPPYG00000004776) #35 RAB21 (ENSPPYG00000030263) #36 TMEM19 (ENSPPYG00000004775) #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00880000138028.b.b.b ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00880000138028.b.b.b ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Human MODERN SPECIES 3 ACSS3 (ENSG00000111058) #7 LIN7A (ENSG00000111052) #8 MYF5 (ENSG00000111049) #9 MYF6 (ENSG00000111046) #10 PTPRQ (ENSG00000139304) #11 OTOGL (ENSG00000165899) #12 PPP1R12A (ENSG00000058272) #13 PAWR (ENSG00000177425) #14 SYT1 (ENSG00000067715) #15 NAV3 (ENSG00000067798) #16 E2F7 (ENSG00000165891) #17 CSRP2 (ENSG00000175183) #18 ZDHHC17 (ENSG00000186908) #19 OSBPL8 (ENSG00000091039) #20 BBS10 (ENSG00000179941) #21 NAP1L1 (ENSG00000187109) #22 PHLDA1 (ENSG00000139289) #23 KRR1 (ENSG00000111615) #24 GLIPR1 (ENSG00000139278) #25 GLIPR1L2 (ENSG00000180481) #26 GLIPR1L1 (ENSG00000173401) #28 CAPS2 (ENSG00000180881) #29 KCNC2 (ENSG00000166006) #30 ATXN7L3B (ENSG00000253719) #32 TRHDE (ENSG00000072657) #33 TPH2 (ENSG00000139287) #34 TBC1D15 (ENSG00000121749) #35 RAB21 (ENSG00000080371) #36 TMEM19 (ENSG00000139291) #37 THAP2 (ENSG00000173451) ZFC3H1 (ENSG00000133858) Pan ANCESTRAL SPECIES 4 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154389.b.e ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00950000182922.a.a.a.b.a.b.a.b.b.a ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00880000138028.b.b.b ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Chimpanzee MODERN SPECIES 3 PAWR (ENSPTRG00000005250) #14 SYT1 (ENSPTRG00000024064) #15 ENSPTRG00000050322 ENSPTRG00000044151 ENSPTRG00000046920 NAV3 (ENSPTRG00000005247) #16 E2F7 (ENSPTRG00000005245) #17 ENSPTRG00000051009 CSRP2 (ENSPTRG00000005244) #18 ZDHHC17 (ENSPTRG00000005243) #19 ENSPTRG00000048649 ENSPTRG00000045883 OSBPL8 (ENSPTRG00000005242) #20 BBS10 (ENSPTRG00000005241) #21 ENSPTRG00000043245 NAP1L1 (ENSPTRG00000005240) #22 PHLDA1 (ENSPTRG00000043613) #23 KRR1 (ENSPTRG00000005238) #24 GLIPR1 (ENSPTRG00000005237) #25 GLIPR1L2 (ENSPTRG00000005236) #26 GLIPR1L1 (ENSPTRG00000005234) #28 CAPS2 (ENSPTRG00000005233) #29 KCNC2 (ENSPTRG00000005232) #30 ENSPTRG00000048875 #31 ATXN7L3B (ENSPTRG00000039132) #32 TRHDE (ENSPTRG00000005230) #33 TPH2 (ENSPTRG00000044968) #34 TBC1D15 (ENSPTRG00000005228) #35 RAB21 (ENSPTRG00000005227) #36 TMEM19 (ENSPTRG00000005226) #37 THAP2 (ENSPTRG00000005225) Bonobo MODERN SPECIES 3 OTOGL (ENSPPAG00000014085) #12 PPP1R12A (ENSPPAG00000030740) #13 PAWR (ENSPPAG00000043711) #14 SYT1 (ENSPPAG00000029261) #15 ENSPPAG00000028521 ENSPPAG00000015674 NAV3 (ENSPPAG00000036134) #16 E2F7 (ENSPPAG00000002532) #17 ENSPPAG00000042681 ENSPPAG00000042089 #18 ZDHHC17 (ENSPPAG00000030097) #19 ENSPPAG00000040481 OSBPL8 (ENSPPAG00000043423) #20 BBS10 (ENSPPAG00000028532) #21 ENSPPAG00000043638 NAP1L1 (ENSPPAG00000043344) #22 PHLDA1 (ENSPPAG00000030521) #23 KRR1 (ENSPPAG00000011194) #24 GLIPR1 (ENSPPAG00000038902) #25 GLIPR1L2 (ENSPPAG00000038173) #26 GLIPR1L1 (ENSPPAG00000027759) #28 CAPS2 (ENSPPAG00000005409) #29 ENSPPAG00000040201 #30 ATXN7L3B (ENSPPAG00000014779) #32 TRHDE (ENSPPAG00000036451) #33 TPH2 (ENSPPAG00000030636) #34 TBC1D15 (ENSPPAG00000042230) #35 RAB21 (ENSPPAG00000043593) #36 ENSPPAG00000035107 #37 THAP2 (ENSPPAG00000031711) ZFC3H1 (ENSPPAG00000029409) Gorilla DUPLICATION Gorilla MODERN SPECIES 3 PPP1R12A (ENSGGOG00000014574) #13 PAWR (ENSGGOG00000010093) #14 ENSGGOG00000022534 SYT1 (ENSGGOG00000024224) #15 ENSGGOG00000002908 NAV3 (ENSGGOG00000006574) #16 E2F7 (ENSGGOG00000012645) #17 ENSGGOG00000038839 ENSGGOG00000041578 #18 ENSGGOG00000039704 #18 ZDHHC17 (ENSGGOG00000023287) #19 ENSGGOG00000023867 OSBPL8 (ENSGGOG00000016140) #20 BBS10 (ENSGGOG00000023091) #21 ENSGGOG00000041304 NAP1L1 (ENSGGOG00000003883) #22 KRR1 (ENSGGOG00000013596) #24 GLIPR1 (ENSGGOG00000013591) #25 GLIPR1L2 (ENSGGOG00000024647) #26 GLIPR1L1 (ENSGGOG00000001021) #28 CAPS2 (ENSGGOG00000013620) #29 KCNC2 (ENSGGOG00000003896) #30 ENSGGOG00000038335 #31 ATXN7L3B (ENSGGOG00000039836) #32 TRHDE (ENSGGOG00000011009) #33 TPH2 (ENSGGOG00000012963) #34 TBC1D15 (ENSGGOG00000013907) #35 RAB21 (ENSGGOG00000015218) #36 TMEM19 (ENSGGOG00000026275) #37 THAP2 (ENSGGOG00000036967) ZFC3H1 (ENSGGOG00000025994) Gorilla MODERN SPECIES 4 SLC25A30 (ENSGGOG00000012295) COG3 (ENSGGOG00000006014) ERICH6B (ENSGGOG00000006343) CBY2 (ENSGGOG00000010156) SIAH3 (ENSGGOG00000001856) ZC3H13 (ENSGGOG00000005496) CPB2 (ENSGGOG00000002007) LCP1 (ENSGGOG00000015581) LRRC63 (ENSGGOG00000004589) ENSGGOG00000042457 RUBCNL (ENSGGOG00000010430) ENSGGOG00000040281 LRCH1 (ENSGGOG00000006833) ESD (ENSGGOG00000041798) HTR2A (ENSGGOG00000038568) ENSGGOG00000040252 #22 SUCLA2 (ENSGGOG00000008224) NUDT15 (ENSGGOG00000008232) MED4 (ENSGGOG00000014132) ITM2B (ENSGGOG00000006744) RB1 (ENSGGOG00000016440) ENSGGOG00000025744 LPAR6 (ENSGGOG00000015398) RCBTB2 (ENSGGOG00000004291) ENSGGOG00000043311 CYSLTR2 (ENSGGOG00000040254) FNDC3A (ENSGGOG00000005701) ENSGGOG00000042037 MLNR (ENSGGOG00000003817) CDADC1 (ENSGGOG00000005192) CAB39L (ENSGGOG00000000576) Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000017839.o.b.b.b.f ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000017839.o.b.b.b.f ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Vervet Monkey MODERN SPECIES 2 MYF5 (ENSCSAG00000003889) #9 MYF6 (ENSCSAG00000003893) #10 PTPRQ (ENSCSAG00000003913) #11 OTOGL (ENSCSAG00000003939) #12 PPP1R12A (ENSCSAG00000003956) #13 PAWR (ENSCSAG00000003962) #14 SYT1 (ENSCSAG00000003971) #15 ENSCSAG00000018914 ENSCSAG00000018912 ENSCSAG00000003979 #16 E2F7 (ENSCSAG00000003998) #17 CSRP2 (ENSCSAG00000004009) #18 ZDHHC17 (ENSCSAG00000004014) #19 OSBPL8 (ENSCSAG00000004024) #20 BBS10 (ENSCSAG00000004028) #21 NAP1L1 (ENSCSAG00000004030) #22 ENSCSAG00000018909 KRR1 (ENSCSAG00000004034) #24 GLIPR1 (ENSCSAG00000004038) #25 GLIPR1L2 (ENSCSAG00000004041) #26 GLIPR1L1 (ENSCSAG00000004045) #28 CAPS2 (ENSCSAG00000004056) #29 KCNC2 (ENSCSAG00000004064) #30 ATXN7L3B (ENSCSAG00000018907) #32 TRHDE (ENSCSAG00000004072) #33 TBC1D15 (ENSCSAG00000004078) #35 RAB21 (ENSCSAG00000004081) #36 TMEM19 (ENSCSAG00000004088) #37 THAP2 (ENSCSAG00000004092) ZFC3H1 (ENSCSAG00000004100) LGR5 (ENSCSAG00000004119) Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00390000009168.hb ENSGT01050000244986.b.b.d.a.a.b ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000017839.o.b.b.b.f ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00410000025695.a.n.b ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 Macaca DUPLICATION Macaca ANCESTRAL SPECIES 6 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00910000147454 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00390000009168.hb ENSGT01050000244986.b.b.d.a.a.b ENSGT00940000156622 #20 ENSGT00960000192410 ENSGT00390000002417 #21 ENSGT00940000153362.a.lb #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00910000147024 #31 ENSGT00940000162576 #32 ENSGT00410000025695.a.n.b ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Macaca_a ANCESTRAL SPECIES 6 ENSGT00940000156120.a #13 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.a.a.b.a.b.c.b ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00950000183030.m.a.a.b.b.a.b.a ENSGT00940000158014 #16 ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.a.a.b ENSGT01050000245239.a.a ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT01030000234542.b.a.a.a.b.a.a.a.b.a.a ENSGT01050000244986.b.b.d.a.a.b.a ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a.lb #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000164709.a.b.b.a.b.b.a.a.a.b ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Rhesus MODERN SPECIES 2 SYT1 (ENSMMUG00000005530) #15 ENSMMUG00000060137 ENSMMUG00000051304 ENSMMUG00000058640 NAV3 (ENSMMUG00000021329) #16 ENSMMUG00000060140 ENSMMUG00000055171 ENSMMUG00000059985 E2F7 (ENSMMUG00000022846) #17 ENSMMUG00000052719 CSRP2 (ENSMMUG00000018257) #18 ZDHHC17 (ENSMMUG00000018254) #19 ENSMMUG00000057698 OSBPL8 (ENSMMUG00000017864) #20 BBS10 (ENSMMUG00000056087) #21 NAP1L1 (ENSMMUG00000015583) #22 PHLDA1 (ENSMMUG00000064103) #23 ENSMMUG00000053099 KRR1 (ENSMMUG00000009640) #24 GLIPR1L2 (ENSMMUG00000012290) #26 GLIPR1L1 (ENSMMUG00000012289) #28 CAPS2 (ENSMMUG00000012288) #29 KCNC2 (ENSMMUG00000012362) #30 ENSMMUG00000051853 ATXN7L3B (ENSMMUG00000064647) #32 ENSMMUG00000055294 ENSMMUG00000050112 TRHDE (ENSMMUG00000014775) #33 TPH2 (ENSMMUG00000007730) #34 TBC1D15 (ENSMMUG00000007727) #35 RAB21 (ENSMMUG00000040380) #36 Pig-tailed macaque MODERN SPECIES 517 ENSMNEG00000038165 ENSMNEG00000037055 ENSMNEG00000028899 ENSMNEG00000026858 ENSMNEG00000009689 ENSMNEG00000000985 NAV3 (ENSMNEG00000043424) #16 E2F7 (ENSMNEG00000025875) #17 CSRP2 (ENSMNEG00000030922) #18 ZDHHC17 (ENSMNEG00000028456) #19 ENSMNEG00000035026 ENSMNEG00000032096 OSBPL8 (ENSMNEG00000028835) #20 ENSMNEG00000030308 BBS10 (ENSMNEG00000040224) #21 NAP1L1 (ENSMNEG00000035793) #22 PHLDA1 (ENSMNEG00000033607) #23 ENSMNEG00000040738 ENSMNEG00000045114 ENSMNEG00000034922 #24 GLIPR1 (ENSMNEG00000044536) #25 GLIPR1L2 (ENSMNEG00000044396) #26 GLIPR1L1 (ENSMNEG00000028603) #28 CAPS2 (ENSMNEG00000011146) #29 KCNC2 (ENSMNEG00000035997) #30 ENSMNEG00000002104 #31 ATXN7L3B (ENSMNEG00000006304) #32 ENSMNEG00000035574 TRHDE (ENSMNEG00000038410) #33 TPH2 (ENSMNEG00000036855) #34 TBC1D15 (ENSMNEG00000044834) #35 Macaca ANCESTRAL SPECIES ENSGT00940000153362.a.mb #22 Macaca_a ANCESTRAL SPECIES ENSGT00940000153362.a.mb #22 Crab-eating macaque MODERN SPECIES 2 ENSMFAG00000000157 ENSMFAG00000034379 ENSMFAG00000034925 NAV3 (ENSMFAG00000044289) #16 ENSMFAG00000059233 ENSMFAG00000060207 ENSMFAG00000065572 E2F7 (ENSMFAG00000000355) #17 CSRP2 (ENSMFAG00000033853) #18 ZDHHC17 (ENSMFAG00000042288) #19 ENSMFAG00000034161 ENSMFAG00000047389 ENSMFAG00000057937 OSBPL8 (ENSMFAG00000036321) #20 BBS10 (ENSMFAG00000033883) #21 NAP1L1 (ENSMFAG00000001457) #22 PHLDA1 (ENSMFAG00000001119) #23 ENSMFAG00000053039 ENSMFAG00000032969 ENSMFAG00000001123 KRR1 (ENSMFAG00000000042) #24 GLIPR1 (ENSMFAG00000003978) #25 GLIPR1L1 (ENSMFAG00000031259) #28 CAPS2 (ENSMFAG00000038272) #29 KCNC2 (ENSMFAG00000032844) #30 ENSMFAG00000060772 ENSMFAG00000051484 ENSMFAG00000060704 ENSMFAG00000060154 TRHDE (ENSMFAG00000044278) #33 TPH2 (ENSMFAG00000035804) #34 Rhesus MODERN SPECIES ENSMMUG00000018263 ADGRL4 (ENSMMUG00000023345) IFI44 (ENSMMUG00000002350) IFI44L (ENSMMUG00000001569) PTGFR (ENSMMUG00000010594) GIPC2 (ENSMMUG00000049326) DNAJB4 (ENSMMUG00000050425) FUBP1 (ENSMMUG00000002899) NEXN (ENSMMUG00000010352) ENSMMUG00000062662 MIGA1 (ENSMMUG00000011987) USP33 (ENSMMUG00000018326) ZZZ3 (ENSMMUG00000063855) AK5 (ENSMMUG00000020218) ENSMMUG00000053069 ENSMMUG00000020200 #22 PIGK (ENSMMUG00000020217) ST6GALNAC5 (ENSMMUG00000005994) ENSMMUG00000047939 ST6GALNAC3 (ENSMMUG00000005990) ASB17 (ENSMMUG00000018695) MSH4 (ENSMMUG00000000875) RABGGTB (ENSMMUG00000000873) ACADM (ENSMMUG00000007220) ENSMMUG00000054727 SLC44A5 (ENSMMUG00000017907) LHX8 (ENSMMUG00000005287) TYW3 (ENSMMUG00000014595) CRYZ (ENSMMUG00000019493) FPGT (ENSMMUG00000019488) LRRC53 (ENSMMUG00000042455) Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00390000009168.hb ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00940000158854.ab.a ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00410000025695.a.n.b ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 Olive baboon MODERN SPECIES 19 OTOGL (ENSPANG00000012907) #12 ENSPANG00000047805 PPP1R12A (ENSPANG00000026354) #13 PAWR (ENSPANG00000009557) #14 SYT1 (ENSPANG00000009048) #15 ENSPANG00000040020 ENSPANG00000015985 ENSPANG00000043139 NAV3 (ENSPANG00000007911) #16 E2F7 (ENSPANG00000004929) #17 CSRP2 (ENSPANG00000023047) #18 ZDHHC17 (ENSPANG00000004050) #19 ENSPANG00000028903 OSBPL8 (ENSPANG00000009379) #20 BBS10 (ENSPANG00000026355) #21 NAP1L1 (ENSPANG00000009165) #22 PHLDA1 (ENSPANG00000013115) #23 ENSPANG00000048738 ENSPANG00000047595 ENSPANG00000031665 KRR1 (ENSPANG00000019085) #24 GLIPR1 (ENSPANG00000005562) #25 GLIPR1L2 (ENSPANG00000036151) #26 GLIPR1L1 (ENSPANG00000032562) #28 CAPS2 (ENSPANG00000017443) #29 KCNC2 (ENSPANG00000025710) #30 ATXN7L3B (ENSPANG00000006847) #32 ENSPANG00000044875 TRHDE (ENSPANG00000007912) #33 TPH2 (ENSPANG00000011239) #34 TBC1D15 (ENSPANG00000009049) #35 Cercopithecinae_d ANCESTRAL SPECIES 3 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00940000155142.i.a.a ENSGT00390000003133.i.a ENSGT00940000163914.c.a ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00390000009168.hb ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00940000158854.ab.a ENSGT00390000018052.k ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00410000025695.a.n.b ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 Sooty mangabey MODERN SPECIES 582 PAWR (ENSCATG00000034935) #14 SYT1 (ENSCATG00000033541) #15 ENSCATG00000044466 ENSCATG00000040529 ENSCATG00000017337 NAV3 (ENSCATG00000032040) #16 E2F7 (ENSCATG00000035481) #17 CSRP2 (ENSCATG00000040566) #18 ZDHHC17 (ENSCATG00000040479) #19 ENSCATG00000044128 ENSCATG00000039522 ENSCATG00000005498 OSBPL8 (ENSCATG00000036635) #20 BBS10 (ENSCATG00000042101) #21 ENSCATG00000039964 NAP1L1 (ENSCATG00000032285) #22 ENSCATG00000010102 ENSCATG00000040362 KRR1 (ENSCATG00000038219) #24 GLIPR1 (ENSCATG00000007700) #25 GLIPR1L2 (ENSCATG00000032595) #26 GLIPR1L1 (ENSCATG00000035838) #28 CAPS2 (ENSCATG00000044038) #29 KCNC2 (ENSCATG00000034752) #30 ATXN7L3B (ENSCATG00000002045) #32 ENSCATG00000033580 TRHDE (ENSCATG00000005594) #33 TPH2 (ENSCATG00000037085) #34 ENSCATG00000033175 TBC1D15 (ENSCATG00000032820) #35 RAB21 (ENSCATG00000029219) #36 Drill DUPLICATION Drill MODERN SPECIES 821 ENSMLEG00000037266 ENSMLEG00000014509 ENSMLEG00000028959 ENSMLEG00000035186 ENSMLEG00000020902 ENSMLEG00000034369 ENSMLEG00000027815 NAV3 (ENSMLEG00000033553) #16 E2F7 (ENSMLEG00000040254) #17 CSRP2 (ENSMLEG00000041421) #18 ZDHHC17 (ENSMLEG00000009010) #19 ENSMLEG00000042240 ENSMLEG00000040060 OSBPL8 (ENSMLEG00000035972) #20 BBS10 (ENSMLEG00000042359) #21 NAP1L1 (ENSMLEG00000044434) #22 PHLDA1 (ENSMLEG00000037110) #23 ENSMLEG00000027928 ENSMLEG00000039434 ENSMLEG00000042283 KRR1 (ENSMLEG00000037074) #24 GLIPR1 (ENSMLEG00000037327) #25 GLIPR1L2 (ENSMLEG00000040765) #26 GLIPR1L1 (ENSMLEG00000020393) #28 Drill MODERN SPECIES 1380 EI24 (ENSMLEG00000041112) STT3A (ENSMLEG00000027470) CHEK1 (ENSMLEG00000032859) ACRV1 (ENSMLEG00000033433) PATE1 (ENSMLEG00000028089) PATE2 (ENSMLEG00000034068) PATE3 (ENSMLEG00000033109) ENSMLEG00000032059 PATE4 (ENSMLEG00000036145) ENSMLEG00000003295 HYLS1 (ENSMLEG00000018345) PUS3 (ENSMLEG00000029053) DDX25 (ENSMLEG00000041703) VSIG10L2 (ENSMLEG00000031705) CDON (ENSMLEG00000038907) ENSMLEG00000034453 #22 RPUSD4 (ENSMLEG00000042461) FAM118B (ENSMLEG00000003442) SRPRA (ENSMLEG00000043404) FOXRED1 (ENSMLEG00000038609) TIRAP (ENSMLEG00000043606) DCPS (ENSMLEG00000028091) ST3GAL4 (ENSMLEG00000035571) KIRREL3 (ENSMLEG00000040698) Rhinopithecus ANCESTRAL SPECIES 358 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 Golden snub-nosed monkey MODERN SPECIES 1031 E2F7 (ENSRROG00000031867) #17 CSRP2 (ENSRROG00000031526) #18 ZDHHC17 (ENSRROG00000039872) #19 OSBPL8 (ENSRROG00000042405) #20 BBS10 (ENSRROG00000028824) #21 ENSRROG00000014250 NAP1L1 (ENSRROG00000026775) #22 ENSRROG00000033201 PHLDA1 (ENSRROG00000007029) #23 ENSRROG00000024996 ENSRROG00000037708 KRR1 (ENSRROG00000029658) #24 GLIPR1 (ENSRROG00000043395) #25 ENSRROG00000041620 ENSRROG00000016846 GLIPR1L2 (ENSRROG00000017927) #26 GLIPR1L1 (ENSRROG00000039268) #28 CAPS2 (ENSRROG00000036265) #29 ENSRROG00000007078 KCNC2 (ENSRROG00000028887) #30 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 416 ENSRBIG00000044674 ENSRBIG00000044553 ENSRBIG00000035549 NAV3 (ENSRBIG00000032816) #16 E2F7 (ENSRBIG00000044218) #17 CSRP2 (ENSRBIG00000001565) #18 ZDHHC17 (ENSRBIG00000036627) #19 OSBPL8 (ENSRBIG00000042807) #20 BBS10 (ENSRBIG00000044840) #21 ENSRBIG00000044471 #22 ENSRBIG00000039726 PHLDA1 (ENSRBIG00000034999) #23 ENSRBIG00000034429 ENSRBIG00000029304 KRR1 (ENSRBIG00000033716) #24 GLIPR1 (ENSRBIG00000034588) #25 GLIPR1L2 (ENSRBIG00000040782) #26 GLIPR1L1 (ENSRBIG00000031640) #28 Black snub-nosed monkey MODERN SPECIES 1079 PKNOX2 (ENSRBIG00000030649) FEZ1 (ENSRBIG00000037202) EI24 (ENSRBIG00000043417) ENSRBIG00000031450 ACRV1 (ENSRBIG00000024850) PATE1 (ENSRBIG00000034227) PATE2 (ENSRBIG00000031818) PATE3 (ENSRBIG00000040327) ENSRBIG00000044350 PATE4 (ENSRBIG00000032415) PUS3 (ENSRBIG00000044456) DDX25 (ENSRBIG00000034284) VSIG10L2 (ENSRBIG00000015879) CDON (ENSRBIG00000042477) ENSRBIG00000029777 ENSRBIG00000042603 #22 RPUSD4 (ENSRBIG00000034842) FAM118B (ENSRBIG00000035698) SRPRA (ENSRBIG00000008702) FOXRED1 (ENSRBIG00000028979) TIRAP (ENSRBIG00000033374) DCPS (ENSRBIG00000044049) ST3GAL4 (ENSRBIG00000043825) KIRREL3 (ENSRBIG00000034830) HSP90AA1 (ENSRBIG00000040347) DYNC1H1 (ENSRBIG00000039574) ENSRBIG00000000471 PPP2R5C (ENSRBIG00000043322) ENSRBIG00000039177 RTL1 (ENSRBIG00000029816) ENSRBIG00000027768 Platyrrhini ANCESTRAL SPECIES 6 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT00910000148286 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.u.a.b #18 ENSGT00940000154980.u.a.a #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00910000147072.b ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 1029 OSBPL8 (ENSANAG00000034185) #20 BBS10 (ENSANAG00000025268) #21 NAP1L1 (ENSANAG00000038286) #22 PHLDA1 (ENSANAG00000019844) #23 KRR1 (ENSANAG00000025895) #24 GLIPR1 (ENSANAG00000031131) #25 GLIPR1L2 (ENSANAG00000027474) #26 GLIPR1L1 (ENSANAG00000029186) #28 CAPS2 (ENSANAG00000029408) #29 KCNC2 (ENSANAG00000033192) #30 ENSANAG00000031750 ENSANAG00000031854 #31 ATXN7L3B (ENSANAG00000003591) #32 ENSANAG00000038180 TRHDE (ENSANAG00000021382) #33 TPH2 (ENSANAG00000032498) #34 TBC1D15 (ENSANAG00000022369) #35 RAB21 (ENSANAG00000024371) #36 Mas night monkey MODERN SPECIES 992 PCSK1 (ENSANAG00000029236) ELL2 (ENSANAG00000037750) GLRX (ENSANAG00000032892) RHOBTB3 (ENSANAG00000022788) ENSANAG00000038443 SPATA9 (ENSANAG00000036695) RFESD (ENSANAG00000028769) ARSK (ENSANAG00000022497) SKIC3 (ENSANAG00000020245) ENSANAG00000035578 ENSANAG00000031089 ENSANAG00000032979 #22 MCTP1 (ENSANAG00000020230) ENSANAG00000021287 SLF1 (ENSANAG00000016908) KIAA0825 (ENSANAG00000025687) FAM172A (ENSANAG00000035869) ENSANAG00000035483 NR2F1 (ENSANAG00000031992) ENSANAG00000024012 ENSANAG00000033833 ENSANAG00000030581 ARRDC3 (ENSANAG00000025287) ADGRV1 (ENSANAG00000015354) LYSMD3 (ENSANAG00000026299) POLR3G (ENSANAG00000005030) MBLAC2 (ENSANAG00000025030) Mas night monkey MODERN SPECIES 249 RAB2A (ENSANAG00000035405) CA8 (ENSANAG00000022483) TOX (ENSANAG00000037539) NSMAF (ENSANAG00000027618) SDCBP (ENSANAG00000029608) CYP7A1 (ENSANAG00000019928) UBXN2B (ENSANAG00000034539) ENSANAG00000038124 FAM110B (ENSANAG00000019375) BPNT2 (ENSANAG00000021522) ENSANAG00000002536 PENK (ENSANAG00000017945) SDR16C5 (ENSANAG00000035994) CHCHD7 (ENSANAG00000022037) PLAG1 (ENSANAG00000023401) ENSANAG00000027241 #22 ENSANAG00000024083 ENSANAG00000038097 LYN (ENSANAG00000021085) TGS1 (ENSANAG00000035525) TMEM68 (ENSANAG00000025144) XKR4 (ENSANAG00000023443) RP1 (ENSANAG00000026159) ENSANAG00000035125 SOX17 (ENSANAG00000035193) ENSANAG00000018191 KCNB2 (ENSANAG00000030632) TERF1 (ENSANAG00000034933) SBSPON (ENSANAG00000036555) ENSANAG00000033829 ENSANAG00000036501 Cebidae ANCESTRAL SPECIES 2 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.u.a.a #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00910000147072.b ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Marmoset DUPLICATION Marmoset MODERN SPECIES 21 MYF6 (ENSCJAG00000081789) #10 PTPRQ (ENSCJAG00000019332) #11 OTOGL (ENSCJAG00000019323) #12 PPP1R12A (ENSCJAG00000019271) #13 PAWR (ENSCJAG00000019265) #14 SYT1 (ENSCJAG00000019262) #15 ENSCJAG00000078194 ENSCJAG00000078124 NAV3 (ENSCJAG00000019176) #16 E2F7 (ENSCJAG00000019162) #17 ENSCJAG00000019153 #18 ZDHHC17 (ENSCJAG00000019075) #19 OSBPL8 (ENSCJAG00000001055) #20 BBS10 (ENSCJAG00000001113) #21 ENSCJAG00000078161 NAP1L1 (ENSCJAG00000001115) #22 PHLDA1 (ENSCJAG00000072700) #23 ENSCJAG00000075772 ENSCJAG00000077543 ENSCJAG00000070252 ENSCJAG00000077700 KRR1 (ENSCJAG00000001181) #24 ENSCJAG00000069534 GLIPR1L2 (ENSCJAG00000001222) #26 ENSCJAG00000083004 ENSCJAG00000076031 GLIPR1 (ENSCJAG00000001210) #25 CAPS2 (ENSCJAG00000001238) #29 KCNC2 (ENSCJAG00000001261) #30 ENSCJAG00000060734 ENSCJAG00000023388 Marmoset MODERN SPECIES 6 ENSCJAG00000070490 ENSCJAG00000058149 ENSCJAG00000015479 TRNT1 (ENSCJAG00000015466) ENSCJAG00000074141 IL5RA (ENSCJAG00000015437) ENSCJAG00000086653 CNTN4 (ENSCJAG00000015394) ENSCJAG00000023368 CNTN6 (ENSCJAG00000015346) ENSCJAG00000084962 CHL1 (ENSCJAG00000015257) ENSCJAG00000082047 ENSCJAG00000077178 CNTN3 (ENSCJAG00000015217) ENSCJAG00000015202 #22 ENSCJAG00000080600 ENSCJAG00000070041 PDZRN3 (ENSCJAG00000015181) ENSCJAG00000079111 PPP4R2 (ENSCJAG00000041360) GXYLT2 (ENSCJAG00000015146) ENSCJAG00000075002 SHQ1 (ENSCJAG00000015131) RYBP (ENSCJAG00000053393) ENSCJAG00000083199 ENSCJAG00000079742 ENSCJAG00000074041 PROK2 (ENSCJAG00000080226) GPR27 (ENSCJAG00000040260) ENSCJAG00000044237 Cebidae_a ANCESTRAL SPECIES 8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00550000074807.d ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394 #15 ENSGT01100000263748 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980.u.a.a #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00910000147072.b ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 Capuchin MODERN SPECIES 67 ALCAM (ENSCCAG00000034808) ENSCCAG00000036645 CBLB (ENSCCAG00000031829) E2F7 (ENSCCAG00000020477) #17 CSRP2 (ENSCCAG00000027954) #18 ZDHHC17 (ENSCCAG00000024753) #19 ENSCCAG00000026832 #20 BBS10 (ENSCCAG00000010754) #21 NAP1L1 (ENSCCAG00000030757) #22 ENSCCAG00000029133 PHLDA1 (ENSCCAG00000030384) #23 GLIPR1 (ENSCCAG00000033906) #25 KRR1 (ENSCCAG00000021457) #24 GLIPR1L2 (ENSCCAG00000021275) #26 GLIPR1L1 (ENSCCAG00000006107) #28 CAPS2 (ENSCCAG00000033136) #29 KCNC2 (ENSCCAG00000028917) #30 ENSCCAG00000000428 ENSCCAG00000010640 #31 ATXN7L3B (ENSCCAG00000032292) #32 ENSCCAG00000024692 Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 51 SCML2 (ENSSBOG00000023475) CDKL5 (ENSSBOG00000034927) RS1 (ENSSBOG00000022074) PPEF1 (ENSSBOG00000025564) PHKA2 (ENSSBOG00000028848) ADGRG2 (ENSSBOG00000036029) PDHA1 (ENSSBOG00000021023) MAP3K15 (ENSSBOG00000023444) ENSSBOG00000026951 ENSSBOG00000036210 BCLAF3 (ENSSBOG00000031024) MAP7D2 (ENSSBOG00000029797) ENSSBOG00000031558 ENSSBOG00000029635 RPS6KA3 (ENSSBOG00000034830) ENSSBOG00000018382 #22 CNKSR2 (ENSSBOG00000029741) SMPX (ENSSBOG00000033495) MBTPS2 (ENSSBOG00000029363) SMS (ENSSBOG00000024222) ENSSBOG00000000154 PHEX (ENSSBOG00000035899) ENSSBOG00000022205 ENSSBOG00000017959 PTCHD1 (ENSSBOG00000022861) PRDX4 (ENSSBOG00000026851) ACOT9 (ENSSBOG00000035947) SAT1 (ENSSBOG00000023952) ENSSBOG00000023578 CXorf58 (ENSSBOG00000023363) KLHL15 (ENSSBOG00000011468) Bolivian squirrel monkey MODERN SPECIES 67 MYF6 (ENSSBOG00000021822) #10 PTPRQ (ENSSBOG00000027538) #11 OTOGL (ENSSBOG00000033681) #12 ENSSBOG00000026289 PPP1R12A (ENSSBOG00000033660) #13 PAWR (ENSSBOG00000025731) #14 SYT1 (ENSSBOG00000033271) #15 ENSSBOG00000025849 ENSSBOG00000036163 NAV3 (ENSSBOG00000036099) #16 E2F7 (ENSSBOG00000028674) #17 ENSSBOG00000014459 #18 ZDHHC17 (ENSSBOG00000036173) #19 OSBPL8 (ENSSBOG00000030671) #20 BBS10 (ENSSBOG00000022169) #21 ENSSBOG00000034714 #22 KRR1 (ENSSBOG00000029569) #24 GLIPR1 (ENSSBOG00000033770) #25 ENSSBOG00000025791 GLIPR1L2 (ENSSBOG00000027126) #26 GLIPR1L1 (ENSSBOG00000033891) #28 CAPS2 (ENSSBOG00000018991) #29 KCNC2 (ENSSBOG00000022617) #30 ATXN7L3B (ENSSBOG00000006505) #32 TRHDE (ENSSBOG00000029813) #33 TPH2 (ENSSBOG00000029996) #34 TBC1D15 (ENSSBOG00000031133) #35 RAB21 (ENSSBOG00000031540) #36 TMEM19 (ENSSBOG00000020771) #37 THAP2 (ENSSBOG00000025208) ZFC3H1 (ENSSBOG00000032676) Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394.b #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 122 LIN7A (ENSOGAG00000004616) #8 MYF5 (ENSOGAG00000001039) #9 MYF6 (ENSOGAG00000001038) #10 PTPRQ (ENSOGAG00000025362) #11 OTOGL (ENSOGAG00000030466) #12 PPP1R12A (ENSOGAG00000010740) #13 PAWR (ENSOGAG00000027944) #14 SYT1 (ENSOGAG00000009943) #15 NAV3 (ENSOGAG00000010604) #16 ENSOGAG00000030290 E2F7 (ENSOGAG00000010821) #17 CSRP2 (ENSOGAG00000013999) #18 ZDHHC17 (ENSOGAG00000013994) #19 OSBPL8 (ENSOGAG00000017084) #20 BBS10 (ENSOGAG00000025855) #21 NAP1L1 (ENSOGAG00000010319) #22 PHLDA1 (ENSOGAG00000010317) #23 ENSOGAG00000010313 #24 GLIPR1 (ENSOGAG00000010309) #25 GLIPR1L2 (ENSOGAG00000010303) #26 ENSOGAG00000010299 #28 CAPS2 (ENSOGAG00000010291) #29 ENSOGAG00000006608 KCNC2 (ENSOGAG00000000768) #30 Bushbaby MODERN SPECIES 284 ELF2 (ENSOGAG00000008535) NOCT (ENSOGAG00000008532) SLC7A11 (ENSOGAG00000012756) PCDH18 (ENSOGAG00000030608) ENSOGAG00000007649 ENSOGAG00000026502 ENSOGAG00000028864 #22 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00940000157479 #7 ENSGT00940000153222.a.a #8 ENSGT00950000182959.a.a #9 ENSGT00950000182959.a.b.b.a #10 ENSGT00940000159215 #11 ENSGT00940000160698 #12 ENSGT00940000156120.a #13 ENSGT00390000000406 #14 ENSGT00940000155394.b #15 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 ENSGT00940000155878 #33 ENSGT00950000182885.A.b #34 ENSGT00940000156429 #35 ENSGT00940000156786 #36 ENSGT00390000017998 #37 ENSGT00940000161088 ENSGT00390000001116 Mouse lemur MODERN SPECIES 29 MYF6 (ENSMICG00000004274) #10 PTPRQ (ENSMICG00000038737) #11 OTOGL (ENSMICG00000026871) #12 PPP1R12A (ENSMICG00000032335) #13 ENSMICG00000032513 PAWR (ENSMICG00000031649) #14 SYT1 (ENSMICG00000015517) #15 NAV3 (ENSMICG00000003403) #16 E2F7 (ENSMICG00000013872) #17 ENSMICG00000014368 CSRP2 (ENSMICG00000047076) #18 ZDHHC17 (ENSMICG00000033453) #19 ENSMICG00000029525 OSBPL8 (ENSMICG00000000969) #20 BBS10 (ENSMICG00000042947) #21 NAP1L1 (ENSMICG00000006036) #22 KRR1 (ENSMICG00000015127) #24 GLIPR1 (ENSMICG00000015121) #25 GLIPR1L2 (ENSMICG00000037234) #26 ENSMICG00000015888 #28 CAPS2 (ENSMICG00000015872) #29 KCNC2 (ENSMICG00000017734) #30 ATXN7L3B (ENSMICG00000033344) #32 TRHDE (ENSMICG00000014223) #33 ENSMICG00000027249 TPH2 (ENSMICG00000014200) #34 TBC1D15 (ENSMICG00000009172) #35 ENSMICG00000028003 #36 TMEM19 (ENSMICG00000047949) #37 ZFC3H1 (ENSMICG00000009137) LGR5 (ENSMICG00000009125) Lemuriformes_a ANCESTRAL SPECIES 201 ENSGT00940000158014 #16 ENSGT00940000157713 #17 ENSGT00940000154980 #18 ENSGT00530000063074.b.b #19 ENSGT00940000156622 #20 ENSGT00390000002417 #21 ENSGT00940000161696 ENSGT00940000153362.a #22 ENSGT00440000039564.b #23 ENSGT00390000018775 #24 ENSGT00940000160727 #25 ENSGT00940000162357 #26 ENSGT00940000162547 #28 ENSGT00940000159670 #29 ENSGT00940000157371 #30 ENSGT00940000162576 #32 Greater bamboo lemur MODERN SPECIES 653 PRDM11 (ENSPSMG00000011702) TP53I11 (ENSPSMG00000011679) TSPAN18 (ENSPSMG00000011657) CD82 (ENSPSMG00000011626) ALX4 (ENSPSMG00000011596) EXT2 (ENSPSMG00000011571) ACCS (ENSPSMG00000011499) ACCSL (ENSPSMG00000011452) C11orf96 (ENSPSMG00000011448) ALKBH3 (ENSPSMG00000011436) HSD17B12 (ENSPSMG00000011395) TTC17 (ENSPSMG00000011324) API5 (ENSPSMG00000011122) BBS10 (ENSPSMG00000010996) #21 ENSPSMG00000010987 NAP1L1 (ENSPSMG00000010832) #22 ENSPSMG00000010684 #23 ENSPSMG00000010677 KRR1 (ENSPSMG00000010670) #24 GLIPR1 (ENSPSMG00000010638) #25 GLIPR1L2 (ENSPSMG00000010610) #26 GLIPR1L1 (ENSPSMG00000010601) #28 CAPS2 (ENSPSMG00000010586) #29 KCNC2 (ENSPSMG00000010537) #30 ENSPSMG00000010474 ENSPSMG00000010465 #31 ATXN7L3B (ENSPSMG00000010460) #32 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 411 CFAP276 (ENSPCOG00000028191) TMEM167B (ENSPCOG00000018193) TAF13 (ENSPCOG00000026394) ENSPCOG00000013069 CLCC1 (ENSPCOG00000022049) GPSM2 (ENSPCOG00000000126) AKNAD1 (ENSPCOG00000017292) STXBP3 (ENSPCOG00000005429) FNDC7 (ENSPCOG00000023571) ENSPCOG00000016051 HENMT1 (ENSPCOG00000026621) EEIG2 (ENSPCOG00000001083) ENSPCOG00000021429 SLC25A24 (ENSPCOG00000000076) VAV3 (ENSPCOG00000021616) ENSPCOG00000017515 #22 NTNG1 (ENSPCOG00000025951) PRMT6 (ENSPCOG00000010650) Coquerels sifaka MODERN SPECIES 288 CPNE3 (ENSPCOG00000021043) ENSPCOG00000022771 WWP1 (ENSPCOG00000004152) SLC7A13 (ENSPCOG00000013806) ATP6V0D2 (ENSPCOG00000015992) PSKH2 (ENSPCOG00000021670) CA2 (ENSPCOG00000016735) CA3 (ENSPCOG00000021018) ENSPCOG00000023575 CA13 (ENSPCOG00000015809) ENSPCOG00000016400 E2F5 (ENSPCOG00000022232) LRRCC1 (ENSPCOG00000021499) ENSPCOG00000024304 ENSPCOG00000009683 ENSPCOG00000019629 #22 ENSPCOG00000020967