Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b #22
Gnathostomata	ANCESTRAL SPECIES	734													ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22
Euteleostomi	ANCESTRAL SPECIES	632												ENSGT00390000007101.d.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22
Sarcopterygii	ANCESTRAL SPECIES	372												ENSGT00390000007101.d.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT00940000160609 #31	ENSGT00940000161425 #32
Tetrapoda	ANCESTRAL SPECIES	248														ENSGT00390000001450	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26
Amniota	ANCESTRAL SPECIES	94														ENSGT00390000001450.g	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b	ENSGT00940000159620.b.a
Mammalia	ANCESTRAL SPECIES	76		ENSGT00940000160411	ENSGT00940000155556.d	ENSGT00390000013183	ENSGT00940000163608	ENSGT00940000162820	ENSGT00530000064557	ENSGT00940000163198	ENSGT00940000153306.B	ENSGT00940000154852.b #8	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b	ENSGT00550000074829
Theria	ANCESTRAL SPECIES	37					ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006
Eutheria	ANCESTRAL SPECIES	21	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000162969
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT01000000216607	ENSGT00910000144307 #12	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Primates	ANCESTRAL SPECIES	15	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000169278	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Catarrhini	ANCESTRAL SPECIES		ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000169278	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Hominidae	ANCESTRAL SPECIES		ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00910000148894	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149.c ##15	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00910000148894	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Gorilla	MODERN SPECIES	10	ZNF579 (ENSGGOG00000043034) #7	SBK3 (ENSGGOG00000024208) #8	ENSGGOG00000002404 #9	ENSGGOG00000003632 #10	NAT14 (ENSGGOG00000003631) #11	ZNF628 (ENSGGOG00000026699) #12	C19orf85 (ENSGGOG00000039912) #13	ISOC2 (ENSGGOG00000000598) #14	ENSGGOG00000024881 #15	ENSGGOG00000022653 #16	TMEM190 (ENSGGOG00000009405) #17	IL11 (ENSGGOG00000024621) #18	GARIN5B (ENSGGOG00000001360) #19	COX6B2 (ENSGGOG00000001358) #20	KMT5C (ENSGGOG00000005847) #21	TMEM150B (ENSGGOG00000000490) #22	BRSK1 (ENSGGOG00000000488) #23	HSPBP1 (ENSGGOG00000000484) #24	PPP6R1 (ENSGGOG00000005358) #25	TMEM86B (ENSGGOG00000005353) #26	PTPRH (ENSGGOG00000009047) #27	SYT5 (ENSGGOG00000009037) #28	ENSGGOG00000009024 #29	ENSGGOG00000024427 #30	ENSGGOG00000006050 #31	PPP1R12C (ENSGGOG00000001875) #32	EPS8L1 (ENSGGOG00000001839) #33	RDH13 (ENSGGOG00000000460) #34	GP6 (ENSGGOG00000006054) #35	NLRP2 (ENSGGOG00000001259) #36	NLRP7 (ENSGGOG00000010540) #37
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149.c ##15	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00910000148894	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Human	MODERN SPECIES	10	SBK2 (ENSG00000187550) #9	SSC5D (ENSG00000179954) #10	NAT14 (ENSG00000090971) #11	ZNF628 (ENSG00000197483) #12	C19orf85 (ENSG00000283567) #13	ISOC2 (ENSG00000063241) #14	SHISA7 (ENSG00000187902)	UBE2S (ENSG00000108106) ##15	RPL28 (ENSG00000108107) ##16	TMEM238 (ENSG00000233493)	TMEM190 (ENSG00000160472) #17	IL11 (ENSG00000095752) #18	GARIN5B (ENSG00000180043) #19	COX6B2 (ENSG00000160471) #20	KMT5C (ENSG00000133247) #21	TMEM150B (ENSG00000180061) #22	BRSK1 (ENSG00000160469) #23	HSPBP1 (ENSG00000133265) #24	PPP6R1 (ENSG00000105063) #25	TMEM86B (ENSG00000180089) #26	PTPRH (ENSG00000080031) #27	SYT5 (ENSG00000129990) #28	DNAAF3 (ENSG00000167646) #29	TNNI3 (ENSG00000129991) #30	TNNT1 (ENSG00000105048) #31	PPP1R12C (ENSG00000125503) #32	EPS8L1 (ENSG00000131037) #33	RDH13 (ENSG00000160439) #34	GP6 (ENSG00000088053) #35	NLRP2 (ENSG00000022556) #36	NLRP7 (ENSG00000167634) #37
Pan	ANCESTRAL SPECIES	9	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149.c ##15	ENSGT00390000008732.a.b #16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00910000148894	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Bonobo	MODERN SPECIES	10	SBK3 (ENSPPAG00000021647) #8	ENSPPAG00000026613 #9	SSC5D (ENSPPAG00000027345) #10	ENSPPAG00000038890	ZNF628 (ENSPPAG00000033056) #12	C19orf85 (ENSPPAG00000036206) #13	ISOC2 (ENSPPAG00000022599) #14	UBE2S (ENSPPAG00000040141) ##15	ENSPPAG00000038000 #16	TMEM190 (ENSPPAG00000029512) #17	IL11 (ENSPPAG00000040150) #18	GARIN5B (ENSPPAG00000019150) #19	COX6B2 (ENSPPAG00000026332) #20	ENSPPAG00000009776	KMT5C (ENSPPAG00000043573) #21	TMEM150B (ENSPPAG00000040488) #22	BRSK1 (ENSPPAG00000039809) #23	HSPBP1 (ENSPPAG00000038904) #24	PPP6R1 (ENSPPAG00000036259) #25	TMEM86B (ENSPPAG00000028557) #26	PTPRH (ENSPPAG00000026460) #27	SYT5 (ENSPPAG00000031793) #28	DNAAF3 (ENSPPAG00000031257) #29	TNNI3 (ENSPPAG00000033584) #30	TNNT1 (ENSPPAG00000031969) #31	PPP1R12C (ENSPPAG00000041929) #32	EPS8L1 (ENSPPAG00000043107) #33	RDH13 (ENSPPAG00000021933) #34	GP6 (ENSPPAG00000040421) #35	NLRP2 (ENSPPAG00000039590) #36	NLRP7 (ENSPPAG00000028578) #37
Chimpanzee	MODERN SPECIES	10	SBK2 (ENSPTRG00000011514) #9	SSC5D (ENSPTRG00000023746) #10	NAT14 (ENSPTRG00000011512) #11	ZNF628 (ENSPTRG00000052545) #12	C19orf85 (ENSPTRG00000044228) #13	ISOC2 (ENSPTRG00000011509) #14	ENSPTRG00000049040	UBE2S (ENSPTRG00000011507) ##15	RPL28 (ENSPTRG00000011505) #16	TMEM190 (ENSPTRG00000011504) #17	IL11 (ENSPTRG00000011502) #18	GARIN5B (ENSPTRG00000011501) #19	COX6B2 (ENSPTRG00000011499) #20	COX6B2 (ENSPTRG00000048011)	KMT5C (ENSPTRG00000011498) #21	TMEM150B (ENSPTRG00000011497) #22	BRSK1 (ENSPTRG00000011496) #23	HSPBP1 (ENSPTRG00000011495) #24	PPP6R1 (ENSPTRG00000011494) #25	TMEM86B (ENSPTRG00000011493) #26	PTPRH (ENSPTRG00000011492) #27	SYT5 (ENSPTRG00000011491) #28	DNAAF3 (ENSPTRG00000011490) #29	TNNI3 (ENSPTRG00000028883) #30	TNNT1 (ENSPTRG00000011488) #31	PPP1R12C (ENSPTRG00000011486) #32	EPS8L1 (ENSPTRG00000011485) #33	RDH13 (ENSPTRG00000011484) #34	GP6 (ENSPTRG00000011482) #35	NLRP2 (ENSPTRG00000011480) #36	NLRP7 (ENSPTRG00000011479) #37
Orangutan	MODERN SPECIES	10	ENSPPYG00000010530 #10	NAT14 (ENSPPYG00000010548) #11	ZNF628 (ENSPPYG00000032926) #12	C19orf85 (ENSPPYG00000041745) #13	ISOC2 (ENSPPYG00000010422) #14	SHISA7 (ENSPPYG00000010421)	UBE2S (ENSPPYG00000010418) #15	ENSPPYG00000031157 #16	TMEM238 (ENSPPYG00000038778)	TMEM190 (ENSPPYG00000037286) #17	IL11 (ENSPPYG00000010415) #18	GARIN5B (ENSPPYG00000010414) #19	COX6B2 (ENSPPYG00000010413) #20	ENSPPYG00000038864	KMT5C (ENSPPYG00000010412) #21	TMEM150B (ENSPPYG00000010411) #22	BRSK1 (ENSPPYG00000010410) #23	HSPBP1 (ENSPPYG00000010409) #24	ENSPPYG00000030137 #25	ENSPPYG00000010408 #25	TMEM86B (ENSPPYG00000010406) #26	PTPRH (ENSPPYG00000010405) #27	ENSPPYG00000010404 #28	TNNI3 (ENSPPYG00000010403) #29	ENSPPYG00000010401 #31	PPP1R12C (ENSPPYG00000010400) #32	EPS8L1 (ENSPPYG00000010399) #33	RDH13 (ENSPPYG00000010398) #34	ENSPPYG00000010392 ##35	ENSPPYG00000010389 ##35	ENSPPYG00000010564 ##35
Gibbon	MODERN SPECIES		FIZ1 (ENSNLEG00000034189)	SBK3 (ENSNLEG00000010537) #8	ENSNLEG00000029543 #9	ENSNLEG00000029215 #10	NAT14 (ENSNLEG00000010535) #11	ZNF628 (ENSNLEG00000010532) #12	C19orf85 (ENSNLEG00000028043) #13	ENSNLEG00000010530 #14	UBE2S (ENSNLEG00000010512) #15	ENSNLEG00000010503 #16	ENSNLEG00000031085 #17	ENSNLEG00000010462 #18	GARIN5B (ENSNLEG00000032401) #19	ENSNLEG00000010492 #20	KMT5C (ENSNLEG00000010479) #21	TMEM150B (ENSNLEG00000010464) #22	ENSNLEG00000010458 #23	ENSNLEG00000010453 #24	PPP6R1 (ENSNLEG00000010881) #25	ENSNLEG00000034080 #26	ENSNLEG00000010869 #27	ENSNLEG00000010862 #28	ENSNLEG00000010856 #29	TNNI3 (ENSNLEG00000010793) #30	ENSNLEG00000010769 #32	EPS8L1 (ENSNLEG00000010675) #33	RDH13 (ENSNLEG00000010673) #34	ENSNLEG00000010669 #35	ENSNLEG00000010661 #36	NLRP7 (ENSNLEG00000010637) #37	NCR1 (ENSNLEG00000010611) ##35
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Rhinopithecus	ANCESTRAL SPECIES	12	ENSGT00940000154852.b #8	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Black snub-nosed monkey	MODERN SPECIES	1086	ENSRBIG00000033168	SBK2 (ENSRBIG00000033710) #9	SSC5D (ENSRBIG00000027500) #10	NAT14 (ENSRBIG00000034709) #11	ZNF628 (ENSRBIG00000038702) #12	C19orf85 (ENSRBIG00000028052) #13	ISOC2 (ENSRBIG00000034315) #14	SHISA7 (ENSRBIG00000043226)	UBE2S (ENSRBIG00000030322) #15	ENSRBIG00000034637 #16	TMEM190 (ENSRBIG00000042865) #17	IL11 (ENSRBIG00000027960) #18	GARIN5B (ENSRBIG00000036499) #19	COX6B2 (ENSRBIG00000031490) #20	KMT5C (ENSRBIG00000036676) #21	TMEM150B (ENSRBIG00000042195) #22	ENSRBIG00000029036 #23	HSPBP1 (ENSRBIG00000012019) #24	PPP6R1 (ENSRBIG00000032937) #25	TMEM86B (ENSRBIG00000032639) #26	PTPRH (ENSRBIG00000039823) #27	SYT5 (ENSRBIG00000036608) #28	DNAAF3 (ENSRBIG00000042675) #29	TNNI3 (ENSRBIG00000020190) #30	TNNT1 (ENSRBIG00000019753) #31	PPP1R12C (ENSRBIG00000024411) #32	EPS8L1 (ENSRBIG00000010805) #33	RDH13 (ENSRBIG00000031938) #34	ENSRBIG00000035991 #35	NLRP2 (ENSRBIG00000014521) #36
Golden snub-nosed monkey	MODERN SPECIES	2140	SBK3 (ENSRROG00000035533) #8	SBK2 (ENSRROG00000037827) #9	SSC5D (ENSRROG00000034580) #10	NAT14 (ENSRROG00000020816) #11	ZNF628 (ENSRROG00000039960) #12	C19orf85 (ENSRROG00000042351) #13	ISOC2 (ENSRROG00000041872) #14	SHISA7 (ENSRROG00000044620)	UBE2S (ENSRROG00000045038) #15	ENSRROG00000028904 #16	TMEM190 (ENSRROG00000040710) #17	IL11 (ENSRROG00000041421) #18	GARIN5B (ENSRROG00000043821) #19	COX6B2 (ENSRROG00000012447) #20	KMT5C (ENSRROG00000040048) #21	TMEM150B (ENSRROG00000017092) #22	BRSK1 (ENSRROG00000044095) #23	HSPBP1 (ENSRROG00000039362) #24	PPP6R1 (ENSRROG00000030404) #25	TMEM86B (ENSRROG00000033476) #26	PTPRH (ENSRROG00000030480) #27	SYT5 (ENSRROG00000038228) #28	DNAAF3 (ENSRROG00000030716) #29	TNNI3 (ENSRROG00000042742) #30	TNNT1 (ENSRROG00000040134) #31	PPP1R12C (ENSRROG00000042046) #32	EPS8L1 (ENSRROG00000039155) #33	RDH13 (ENSRROG00000041263) #34	GP6 (ENSRROG00000027075) #35	NLRP2 (ENSRROG00000018802) #36	NLRP7 (ENSRROG00000036446) #37
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Cercopithecinae_a	ANCESTRAL SPECIES	23	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425.c #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Macaca	ANCESTRAL SPECIES	12	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00940000162227.a #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425.c #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Pig-tailed macaque	MODERN SPECIES	143	SBK2 (ENSMNEG00000036467) #9	SSC5D (ENSMNEG00000040780) #10	NAT14 (ENSMNEG00000031578) #11	ZNF628 (ENSMNEG00000040894) #12	C19orf85 (ENSMNEG00000037113) #13	ISOC2 (ENSMNEG00000040257) #14	SHISA7 (ENSMNEG00000027701)	UBE2S (ENSMNEG00000035733) #15	ENSMNEG00000032714 #16	TMEM238 (ENSMNEG00000038199)	TMEM190 (ENSMNEG00000031173) #17	IL11 (ENSMNEG00000030364) #18	GARIN5B (ENSMNEG00000034625) #19	COX6B2 (ENSMNEG00000035636) #20	KMT5C (ENSMNEG00000002570) #21	TMEM150B (ENSMNEG00000034457) #22	BRSK1 (ENSMNEG00000028132) #23	HSPBP1 (ENSMNEG00000020134) #24	PPP6R1 (ENSMNEG00000034172) #25
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000154852.b #8	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00940000162227.a #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425.c #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000047570	ENSMFAG00000055885 #7	SBK3 (ENSMFAG00000063518) #8	SBK2 (ENSMFAG00000044159) #9	SSC5D (ENSMFAG00000031455) #10	ENSMFAG00000062328	C19orf85 (ENSMFAG00000030392) #13	UBE2S (ENSMFAG00000001052) #15	ENSMFAG00000043131 #16	TMEM190 (ENSMFAG00000031628) #17	IL11 (ENSMFAG00000029706) #18	GARIN5B (ENSMFAG00000044642) #19	COX6B2 (ENSMFAG00000002832) #20	ENSMFAG00000009165 #14	KMT5C (ENSMFAG00000040317) #21	TMEM150B (ENSMFAG00000032979) #22	BRSK1 (ENSMFAG00000003553) #23	HSPBP1 (ENSMFAG00000044603) #24	PPP6R1 (ENSMFAG00000001991) #25	ENSMFAG00000057790	ENSMFAG00000045778 #27	SYT5 (ENSMFAG00000002989) #28	DNAAF3 (ENSMFAG00000043604) #29	ENSMFAG00000042843 #30	EPS8L1 (ENSMFAG00000000977) #33	ENSMFAG00000032822 #34	ENSMFAG00000062830	ENSMFAG00000042036 #35	NLRP2 (ENSMFAG00000029871) #36	ENSMFAG00000049313	NLRP7 (ENSMFAG00000003765) #37
Rhesus	MODERN SPECIES	10	SBK3 (ENSMMUG00000004673) #8	SBK2 (ENSMMUG00000056409) #9	SSC5D (ENSMMUG00000005014) #10	NAT14 (ENSMMUG00000052201) #11	C19orf85 (ENSMMUG00000064682) #13	ISOC2 (ENSMMUG00000012704) #14	SHISA7 (ENSMMUG00000042351)	UBE2S (ENSMMUG00000016507) #15	RPL28 (ENSMMUG00000015901) #16	TMEM238 (ENSMMUG00000028715)	TMEM190 (ENSMMUG00000015900) #17	IL11 (ENSMMUG00000048355) #18	GARIN5B (ENSMMUG00000038354) #19	COX6B2 (ENSMMUG00000056461) #20	KMT5C (ENSMMUG00000056164) #21	TMEM150B (ENSMMUG00000028716) #22	BRSK1 (ENSMMUG00000002965) #23	HSPBP1 (ENSMMUG00000002964) #24	PPP6R1 (ENSMMUG00000020520) #25	PTPRH (ENSMMUG00000028717) #27	SYT5 (ENSMMUG00000007653) #28	DNAAF3 (ENSMMUG00000028718) #29	TNNT1 (ENSMMUG00000006169) #31	PPP1R12C (ENSMMUG00000021965) #32	EPS8L1 (ENSMMUG00000021945) #33	ENSMMUG00000022322 #34	GP6 (ENSMMUG00000003117) #35	NLRP2 (ENSMMUG00000003115) #36	NLRP7 (ENSMMUG00000005266) #37	NCR1 (ENSMMUG00000004323) ##35	FCAR (ENSMMUG00000008531) ##35
Cercopithecinae_b	ANCESTRAL SPECIES	39	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425.c #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Olive baboon	MODERN SPECIES	12	FIZ1 (ENSPANG00000038504)	ZNF579 (ENSPANG00000014917) #7	ZNF628 (ENSPANG00000012246) #12	ENSPANG00000040327	SSC5D (ENSPANG00000013109) #10	SBK2 (ENSPANG00000004030) #9	SHISA7 (ENSPANG00000046786)	UBE2S (ENSPANG00000048093) #15	ENSPANG00000029716 #16	TMEM238 (ENSPANG00000015464)	TMEM190 (ENSPANG00000020379) #17	IL11 (ENSPANG00000012310) #18	GARIN5B (ENSPANG00000011354) #19	COX6B2 (ENSPANG00000013749) #20	KMT5C (ENSPANG00000010090) #21	TMEM150B (ENSPANG00000017120) #22	BRSK1 (ENSPANG00000001626) #23	HSPBP1 (ENSPANG00000016442) #24	PPP6R1 (ENSPANG00000004989) #25	TMEM86B (ENSPANG00000006593) #26	PTPRH (ENSPANG00000016443) #27	ENSPANG00000011356 #28	ENSPANG00000018446 #30	TNNT1 (ENSPANG00000035269) #31	EPS8L1 (ENSPANG00000023646) #33	RDH13 (ENSPANG00000008081) #34	ENSPANG00000040543 #35	NLRP2 (ENSPANG00000010048) #36	NLRP7 (ENSPANG00000013750) #37	NCR1 (ENSPANG00000044837) ##35	FCAR (ENSPANG00000014776) ##35
Cercopithecinae_d	ANCESTRAL SPECIES	43	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425.c #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000164627 #37
Drill	MODERN SPECIES	1225	ZNF581 (ENSMLEG00000006114)	ZNF580 (ENSMLEG00000014271)	ZNF524 (ENSMLEG00000007779)	ENSMLEG00000036344	ENSMLEG00000029223	ENSMLEG00000030296 #10	ENSMLEG00000024576	C19orf85 (ENSMLEG00000043548) #13	ISOC2 (ENSMLEG00000041167) #14	ENSMLEG00000043180	RPL28 (ENSMLEG00000039619) ##16	IL11 (ENSMLEG00000041422) #18	GARIN5B (ENSMLEG00000035209) #19	COX6B2 (ENSMLEG00000042579) #20	KMT5C (ENSMLEG00000043572) #21	TMEM150B (ENSMLEG00000043268) #22	BRSK1 (ENSMLEG00000038381) #23	HSPBP1 (ENSMLEG00000039370) #24	PPP6R1 (ENSMLEG00000037991) #25	TMEM86B (ENSMLEG00000037802) #26	PTPRH (ENSMLEG00000031052) #27	SYT5 (ENSMLEG00000019454) #28	DNAAF3 (ENSMLEG00000037192) #29	TNNI3 (ENSMLEG00000035806) #30	TNNT1 (ENSMLEG00000039206) #31	PPP1R12C (ENSMLEG00000029050) #32	ENSMLEG00000012713 #33	RDH13 (ENSMLEG00000039809) #34	GP6 (ENSMLEG00000030042) #35	ENSMLEG00000030288 #36	NLRP7 (ENSMLEG00000032064) #37
Sooty mangabey	MODERN SPECIES	607	SBK2 (ENSCATG00000031008) #9	SSC5D (ENSCATG00000030266) #10	NAT14 (ENSCATG00000033023) #11	ZNF628 (ENSCATG00000040762) #12	C19orf85 (ENSCATG00000045205) #13	ISOC2 (ENSCATG00000032309) #14	SHISA7 (ENSCATG00000045070)	UBE2S (ENSCATG00000044206) #15	ENSCATG00000031417 #16	TMEM238 (ENSCATG00000040960)	TMEM190 (ENSCATG00000036921) #17	IL11 (ENSCATG00000044293) #18	GARIN5B (ENSCATG00000040805) #19	COX6B2 (ENSCATG00000040876) #20	KMT5C (ENSCATG00000039909) #21	TMEM150B (ENSCATG00000037286) #22	BRSK1 (ENSCATG00000036430) #23	HSPBP1 (ENSCATG00000035874) #24	PPP6R1 (ENSCATG00000036956) #25	TMEM86B (ENSCATG00000038894) #26	PTPRH (ENSCATG00000039286) #27	SYT5 (ENSCATG00000035257) #28	DNAAF3 (ENSCATG00000044958) #29	TNNI3 (ENSCATG00000036050) #30	TNNT1 (ENSCATG00000043793) #31	PPP1R12C (ENSCATG00000042553) #32	EPS8L1 (ENSCATG00000021278) #33	RDH13 (ENSCATG00000031277) #34	GP6 (ENSCATG00000033031) #35	NLRP2 (ENSCATG00000029513) #36	NLRP7 (ENSCATG00000016060) #37
Vervet Monkey	MODERN SPECIES	25	FIZ1 (ENSCSAG00000001728)	ZNF579 (ENSCSAG00000019656) #7	ENSCSAG00000001729	SBK2 (ENSCSAG00000001731) #9	SSC5D (ENSCSAG00000001732) #10	NAT14 (ENSCSAG00000001733) #11	ZNF628 (ENSCSAG00000019655) #12	ISOC2 (ENSCSAG00000001735) #14	UBE2S (ENSCSAG00000001736) #15	ENSCSAG00000001738 ##16	TMEM238 (ENSCSAG00000019654)	TMEM190 (ENSCSAG00000001739) #17	IL11 (ENSCSAG00000001740) #18	ENSCSAG00000001742	KMT5C (ENSCSAG00000001744) #21	TMEM150B (ENSCSAG00000001745) #22	BRSK1 (ENSCSAG00000001747) #23	HSPBP1 (ENSCSAG00000001748) #24	ENSCSAG00000001750 #25	TMEM86B (ENSCSAG00000001751) #26	PTPRH (ENSCSAG00000001754) #27	SYT5 (ENSCSAG00000001756) #28	DNAAF3 (ENSCSAG00000001759) #29	TNNI3 (ENSCSAG00000001761) #30	TNNT1 (ENSCSAG00000001763) #31	PPP1R12C (ENSCSAG00000001764) #32	EPS8L1 (ENSCSAG00000001765) #33	RDH13 (ENSCSAG00000001767) #34	ENSCSAG00000001769 #35	NLRP2 (ENSCSAG00000001770) #36	NLRP7 (ENSCSAG00000001772) #37
Platyrrhini	ANCESTRAL SPECIES	36	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT00550000074840.y.a	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Cebidae	ANCESTRAL SPECIES	34	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b.r ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT00550000074840.y.a	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Cebidae_a	ANCESTRAL SPECIES	32	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149.e #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT00550000074840.y.a	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Capuchin	MODERN SPECIES	190	SBK2 (ENSCCAG00000035873) #9	SSC5D (ENSCCAG00000018750) #10	NAT14 (ENSCCAG00000031770) #11	ZNF628 (ENSCCAG00000025672) #12	C19orf85 (ENSCCAG00000030837) #13	ISOC2 (ENSCCAG00000035051) #14	SHISA7 (ENSCCAG00000004710)	ENSCCAG00000026054 #15	ENSCCAG00000025765 #16	TMEM238 (ENSCCAG00000032335)	TMEM190 (ENSCCAG00000025157) #17	IL11 (ENSCCAG00000023076) #18	GARIN5B (ENSCCAG00000031376) #19	COX6B2 (ENSCCAG00000037868) #20	KMT5C (ENSCCAG00000024702) #21	TMEM150B (ENSCCAG00000027698) #22	BRSK1 (ENSCCAG00000036835) #23	HSPBP1 (ENSCCAG00000035475) #24	PPP6R1 (ENSCCAG00000035989) #25	TMEM86B (ENSCCAG00000034636) #26	PTPRH (ENSCCAG00000028050) #27	SYT5 (ENSCCAG00000038023) #28	DNAAF3 (ENSCCAG00000031487) #29	TNNI3 (ENSCCAG00000033279) #30	TNNT1 (ENSCCAG00000034436) #31	ENSCCAG00000020523	PPP1R12C (ENSCCAG00000022378) #32	EPS8L1 (ENSCCAG00000035909) #33	RDH13 (ENSCCAG00000023647) #34	ENSCCAG00000022308	ENSCCAG00000037013 #35
Marmoset	MODERN SPECIES	14	SBK3 (ENSCJAG00000079412) #8	SBK2 (ENSCJAG00000017097) #9	SSC5D (ENSCJAG00000017084) #10	NAT14 (ENSCJAG00000041401) #11	ZNF628 (ENSCJAG00000040315) #12	C19orf85 (ENSCJAG00000045714) #13	ISOC2 (ENSCJAG00000017068) #14	SHISA7 (ENSCJAG00000048648)	UBE2S (ENSCJAG00000068677) #15	RPL28 (ENSCJAG00000000869) ##16	TMEM238 (ENSCJAG00000022190)	IL11 (ENSCJAG00000000858) #18	ENSCJAG00000077878	COX6B2 (ENSCJAG00000079874) #20	KMT5C (ENSCJAG00000000843) #21	TMEM150B (ENSCJAG00000072186) #22	BRSK1 (ENSCJAG00000000812) #23	HSPBP1 (ENSCJAG00000000809) #24	PPP6R1 (ENSCJAG00000017595) #25	PTPRH (ENSCJAG00000017640) #27	SYT5 (ENSCJAG00000017651) #28	DNAAF3 (ENSCJAG00000084526) #29	TNNI3 (ENSCJAG00000017677) #30	ENSCJAG00000045114 #31	PPP1R12C (ENSCJAG00000021527) #32	EPS8L1 (ENSCJAG00000021528) #33	RDH13 (ENSCJAG00000021533) #34	ENSCJAG00000081619 #35	NLRP2B (ENSCJAG00000070310)	NLRP7 (ENSCJAG00000017703) #37	NCR1 (ENSCJAG00000017719) ##35
Mas night monkey	MODERN SPECIES	696	ZNF579 (ENSANAG00000031222) #7	SBK3 (ENSANAG00000030754) #8	SBK2 (ENSANAG00000029395) #9	SSC5D (ENSANAG00000032259) #10	NAT14 (ENSANAG00000031456) #11	ZNF628 (ENSANAG00000028064) #12	C19orf85 (ENSANAG00000024756) #13	ISOC2 (ENSANAG00000034167) #14	SHISA7 (ENSANAG00000029205)	UBE2S (ENSANAG00000031507) #15	ENSANAG00000034536 #16	TMEM190 (ENSANAG00000024460) #17	IL11 (ENSANAG00000025610) #18	COX6B2 (ENSANAG00000034717) #20	KMT5C (ENSANAG00000023018) #21	TMEM150B (ENSANAG00000000054) #22	BRSK1 (ENSANAG00000031900) #23	HSPBP1 (ENSANAG00000022512) #24	PPP6R1 (ENSANAG00000025017) #25	TMEM86B (ENSANAG00000026036) #26	PTPRH (ENSANAG00000020970) #27	SYT5 (ENSANAG00000022116) #28	DNAAF3 (ENSANAG00000029227) #29	TNNI3 (ENSANAG00000035198) #30	TNNT1 (ENSANAG00000029555) #31	PPP1R12C (ENSANAG00000005728) #32	EPS8L1 (ENSANAG00000025304) #33
Tarsier	MODERN SPECIES	5671																TMEM150B (ENSTSYG00000029950) #22	BRSK1 (ENSTSYG00000027036) #23	HSPBP1 (ENSTSYG00000033065) #24	PPP6R1 (ENSTSYG00000013884) #25	TMEM86B (ENSTSYG00000033297) #26	PTPRH (ENSTSYG00000008587) #27	SYT5 (ENSTSYG00000035403) #28	DNAAF3 (ENSTSYG00000032924) #29	TNNI3 (ENSTSYG00000028138) #30	TNNT1 (ENSTSYG00000033722) #31	PPP1R12C (ENSTSYG00000035261) #32	ENSTSYG00000032129 #33	RDH13 (ENSTSYG00000032899) #34	ENSTSYG00000030165 #35
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161619.f.b
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161619.f.b
Greater bamboo lemur	MODERN SPECIES	352	SBK2 (ENSPSMG00000007869) #9	SSC5D (ENSPSMG00000007856) #10	NAT14 (ENSPSMG00000007815) #11	ZNF628 (ENSPSMG00000007804) #12	C19orf85 (ENSPSMG00000007802) #13	ISOC2 (ENSPSMG00000007787) #14	SHISA7 (ENSPSMG00000007752)	UBE2S (ENSPSMG00000007739) #15	RPL28 (ENSPSMG00000007729) ##16	TMEM238 (ENSPSMG00000007713)	TMEM190 (ENSPSMG00000007707) #17	IL11 (ENSPSMG00000007695) #18	GARIN5B (ENSPSMG00000007668) #19	COX6B2 (ENSPSMG00000007656) #20	KMT5C (ENSPSMG00000007640) #21	TMEM150B (ENSPSMG00000007615) #22	BRSK1 (ENSPSMG00000007587) #23	HSPBP1 (ENSPSMG00000007431) #24	PPP6R1 (ENSPSMG00000007399) #25	TMEM86B (ENSPSMG00000007357) #26	PTPRH (ENSPSMG00000007349) #27	SYT5 (ENSPSMG00000007336) #28
Coquerels sifaka	MODERN SPECIES	280	ENSPCOG00000018023	SBK2 (ENSPCOG00000012152) #9	SSC5D (ENSPCOG00000016555) #10	NAT14 (ENSPCOG00000000924) #11	ZNF628 (ENSPCOG00000026399) #12	C19orf85 (ENSPCOG00000024988) #13	ISOC2 (ENSPCOG00000014590) #14	SHISA7 (ENSPCOG00000020413)	UBE2S (ENSPCOG00000023911) #15	ENSPCOG00000017000 #16	TMEM190 (ENSPCOG00000016683) #17	IL11 (ENSPCOG00000019668) #18	GARIN5B (ENSPCOG00000024599) #19	COX6B2 (ENSPCOG00000022320) #20	KMT5C (ENSPCOG00000015129) #21	TMEM150B (ENSPCOG00000025696) #22	BRSK1 (ENSPCOG00000021864) #23	HSPBP1 (ENSPCOG00000016087) #24	PPP6R1 (ENSPCOG00000015042) #25	TMEM86B (ENSPCOG00000020341) #26	PTPRH (ENSPCOG00000016743) #27	SYT5 (ENSPCOG00000025310) #28	DNAAF3 (ENSPCOG00000025892) #29	TNNI3 (ENSPCOG00000019830) #30	TNNT1 (ENSPCOG00000023774) #31	PPP1R12C (ENSPCOG00000026241) #32	EPS8L1 (ENSPCOG00000017590) #33	RDH13 (ENSPCOG00000027034) #34	ENSPCOG00000027378 #35	NLRP2 (ENSPCOG00000024109) #36	ENSPCOG00000025518 ##35
Mouse lemur	MODERN SPECIES	14	SBK2 (ENSMICG00000033482) #9	SSC5D (ENSMICG00000032306) #10	NAT14 (ENSMICG00000027142) #11	C19orf85 (ENSMICG00000044148) #13	ISOC2 (ENSMICG00000036123) #14	SHISA7 (ENSMICG00000034597)	UBE2S (ENSMICG00000043168) #15	ENSMICG00000000996 #16	TMEM238 (ENSMICG00000000995)	TMEM190 (ENSMICG00000047668) #17	IL11 (ENSMICG00000030455) #18	GARIN5B (ENSMICG00000016719) #19	ENSMICG00000016705 #20	ENSMICG00000044547 #20	KMT5C (ENSMICG00000044871) #21	TMEM150B (ENSMICG00000016692) #22	BRSK1 (ENSMICG00000016602) #23	HSPBP1 (ENSMICG00000029358) #24	PPP6R1 (ENSMICG00000043408) #25	TMEM86B (ENSMICG00000035710) #26	PTPRH (ENSMICG00000016632) #27	SYT5 (ENSMICG00000016599) #28	DNAAF3 (ENSMICG00000016558) #29	TNNI3 (ENSMICG00000030348) #30	TNNT1 (ENSMICG00000016550) #31	PPP1R12C (ENSMICG00000016535) #32	EPS8L1 (ENSMICG00000016893) #33	RDH13 (ENSMICG00000033024) #34	ENSMICG00000035013 #35	NLRP2 (ENSMICG00000043941) #36	ENSMICG00000012886
Euarchontoglires_A	ANCESTRAL SPECIES	26	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Tree shrew	MODERN SPECIES	2924																ENSTBEG00000006404 #22	ENSTBEG00000005180 #23
Glires	ANCESTRAL SPECIES	27	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Lagomorpha	ANCESTRAL SPECIES	581																ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23
Rabbit	MODERN SPECIES	1279																TMEM150B (ENSOCUG00000012773) #22	BRSK1 (ENSOCUG00000012750) #23
Pika	MODERN SPECIES	2611																TMEM150B (ENSOPRG00000017244) #22
Rodentia	ANCESTRAL SPECIES	25	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Rodentia_A	ANCESTRAL SPECIES	28	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Sciuridae	ANCESTRAL SPECIES	39	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Marmotini	ANCESTRAL SPECIES	48	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36
Marmotini_b	ANCESTRAL SPECIES	114	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000162969	ENSGT00390000010577
Arctic ground squirrel	MODERN SPECIES	843																TMEM150B (ENSUPAG00010017185) #22	BRSK1 (ENSUPAG00010017191) #23	HSPBP1 (ENSUPAG00010017248) #24	PPP6R1 (ENSUPAG00010017251) #25	TMEM86B (ENSUPAG00010017288) #26	ENSUPAG00010017293 #27	SYT5 (ENSUPAG00010017305) #28	DNAAF3 (ENSUPAG00010017309) #29	TNNI3 (ENSUPAG00010017324) #30	TNNT1 (ENSUPAG00010017329) #31	PPP1R12C (ENSUPAG00010017337) #32	EPS8L1 (ENSUPAG00010017482) #33	RDH13 (ENSUPAG00010017533) #34	ENSUPAG00010017540 ##35	ENSUPAG00010017581 #36
Squirrel	MODERN SPECIES	484				SBK2 (ENSSTOG00000019463) #9	SSC5D (ENSSTOG00000006925) #10	NAT14 (ENSSTOG00000012301) #11	ZNF628 (ENSSTOG00000026126) #12	C19orf85 (ENSSTOG00000034379) #13	ISOC2 (ENSSTOG00000015685) #14	SHISA7 (ENSSTOG00000020184)	UBE2S (ENSSTOG00000023187) #15	RPL28 (ENSSTOG00000008006) ##16	TMEM190 (ENSSTOG00000026466) #17	IL11 (ENSSTOG00000000690) #18	KMT5C (ENSSTOG00000000678) #21	TMEM150B (ENSSTOG00000005815) #22	BRSK1 (ENSSTOG00000005773) #23	HSPBP1 (ENSSTOG00000020717) #24	PPP6R1 (ENSSTOG00000015925) #25	TMEM86B (ENSSTOG00000031469) #26	ENSSTOG00000025588 #27	SYT5 (ENSSTOG00000029144) #28	DNAAF3 (ENSSTOG00000005561) #29	TNNI3 (ENSSTOG00000005538) #30	TNNT1 (ENSSTOG00000025995) #31	PPP1R12C (ENSSTOG00000008693) #32	EPS8L1 (ENSSTOG00000023803) #33	RDH13 (ENSSTOG00000001121) #34	ENSSTOG00000027491 #35	ENSSTOG00000019926	LENG8 (ENSSTOG00000028830)
Alpin marmot	MODERN SPECIES	104	ZNF581 (ENSMMMG00000001405)	ZNF784 (ENSMMMG00000001421)	ENSMMMG00000001452	ZNF524 (ENSMMMG00000001464)	SBK2 (ENSMMMG00000001514) #9	ENSMMMG00000001536 #10	NAT14 (ENSMMMG00000001549) #11	C19orf85 (ENSMMMG00000001567) #13	ISOC2 (ENSMMMG00000001585) #14	UBE2S (ENSMMMG00000001622) #15	RPL28 (ENSMMMG00000001659) ##16	IL11 (ENSMMMG00000001672) #18	ENSMMMG00000001685	COX6B2 (ENSMMMG00000001696) #20	KMT5C (ENSMMMG00000001728) #21	TMEM150B (ENSMMMG00000001781) #22	ENSMMMG00000001801	ENSMMMG00000001815 #23	HSPBP1 (ENSMMMG00000001839) #24	PPP6R1 (ENSMMMG00000001858) #25	TMEM86B (ENSMMMG00000001911) #26	ENSMMMG00000001933 #27	DNAAF3 (ENSMMMG00000001951) #29	TNNI3 (ENSMMMG00000001999) #30	TNNT1 (ENSMMMG00000002017) #31	PPP1R12C (ENSMMMG00000002082) #32	EPS8L1 (ENSMMMG00000002374) #33	RDH13 (ENSMMMG00000002466) #34	ENSMMMG00000002480 ##35	ENSMMMG00000002483 #35	ENSMMMG00000002488 #35
Eurasian red squirrel	MODERN SPECIES	8	SSC5D (ENSSVLG00005023992) #10	NAT14 (ENSSVLG00005023966) #11	ZNF628 (ENSSVLG00005023955) #12	C19orf85 (ENSSVLG00005023926) #13	ISOC2 (ENSSVLG00005023878) #14	SHISA7 (ENSSVLG00005023839)	UBE2S (ENSSVLG00005023806) #15	TMEM238 (ENSSVLG00005023792)	RPL28 (ENSSVLG00005023771) ##16	TMEM190 (ENSSVLG00005023734) #17	IL11 (ENSSVLG00005023677) #18	ENSSVLG00005023651	ENSSVLG00005023607 #19	COX6B2 (ENSSVLG00005023567) #20	KMT5C (ENSSVLG00005023510) #21	TMEM150B (ENSSVLG00005023454) #22	BRSK1 (ENSSVLG00005023255) #23	HSPBP1 (ENSSVLG00005023210) #24	PPP6R1 (ENSSVLG00005023166) #25	TMEM86B (ENSSVLG00005023109) #26	ENSSVLG00005023056	PTPRH (ENSSVLG00005022817) #27	SYT5 (ENSSVLG00005022694) #28	DNAAF3 (ENSSVLG00005022610) #29	TNNI3 (ENSSVLG00005022449) #30	TNNT1 (ENSSVLG00005022059) #31	PPP1R12C (ENSSVLG00005021865) #32	EPS8L1 (ENSSVLG00005021551) #33	ENSSVLG00005021428 #34	ENSSVLG00005021353 #34	ENSSVLG00005021319
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Guinea pig	MODERN SPECIES	70				NAT14 (ENSCPOG00000004948) #11	ZNF628 (ENSCPOG00000036775) #12	C19orf85 (ENSCPOG00000036337) #13	ISOC2 (ENSCPOG00000014834) #14	SHISA7 (ENSCPOG00000036738)	UBE2S (ENSCPOG00000012837) #15	ENSCPOG00000012833 ##16	TMEM238 (ENSCPOG00000019669)	TMEM190 (ENSCPOG00000015468) #17	IL11 (ENSCPOG00000009123) #18	COX6B2 (ENSCPOG00000009105) #20	KMT5C (ENSCPOG00000009102) #21	TMEM150B (ENSCPOG00000039123) #22	BRSK1 (ENSCPOG00000009088) #23	HSPBP1 (ENSCPOG00000030758) #24	PPP6R1 (ENSCPOG00000021924) #25	TMEM86B (ENSCPOG00000009709) #26	ENSCPOG00000026559 #27	SYT5 (ENSCPOG00000009084) #28	DNAAF3 (ENSCPOG00000009082) #29	TNNI3 (ENSCPOG00000020449) #30	TNNT1 (ENSCPOG00000022114) #31	PPP1R12C (ENSCPOG00000027133) #32	ENSCPOG00000006835 #33	RDH13 (ENSCPOG00000012153) #34	NCR1 (ENSCPOG00000001319) ##35	ENSCPOG00000007412 ##35	ENSCPOG00000030847 ##35
Hystricomorpha_b	ANCESTRAL SPECIES	88	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00910000144307 #12	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b ##16	ENSGT00390000008732.a.a.b.b ##16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.c ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.d.a.a ##35
Long-tailed chinchilla	MODERN SPECIES	274	ENSCLAG00000000471	ENSCLAG00000000506	SBK2 (ENSCLAG00000000598) #9	SSC5D (ENSCLAG00000000276) #10	ZNF628 (ENSCLAG00000000533) #12	NAT14 (ENSCLAG00000000540) #11	ISOC2 (ENSCLAG00000000572) #14	ENSCLAG00000000623	UBE2S (ENSCLAG00000000649) #15	RPL28 (ENSCLAG00000000684) ##16	TMEM190 (ENSCLAG00000000703) #17	IL11 (ENSCLAG00000000724) #18	ENSCLAG00000000763 #19	COX6B2 (ENSCLAG00000000892) #20	KMT5C (ENSCLAG00000000904) #21	TMEM150B (ENSCLAG00000000936) #22	BRSK1 (ENSCLAG00000000981) #23	HSPBP1 (ENSCLAG00000000510) #24	PPP6R1 (ENSCLAG00000000725) #25	TMEM86B (ENSCLAG00000000569) #26	ENSCLAG00000000594 #27	SYT5 (ENSCLAG00000000778) #28	DNAAF3 (ENSCLAG00000000382) #29	TNNI3 (ENSCLAG00000000516) #30	TNNT1 (ENSCLAG00000000706) #31	PPP1R12C (ENSCLAG00000000907) #32	EPS8L1 (ENSCLAG00000000411) #33	RDH13 (ENSCLAG00000001660) #34	ENSCLAG00000001076 #35	ENSCLAG00000001196 #35	ENSCLAG00000001529 ##35
Degu	MODERN SPECIES	361	ZNF579 (ENSODEG00000013209) #7	ENSODEG00000010550	SBK2 (ENSODEG00000010236) #9	SSC5D (ENSODEG00000009970) #10	ENSODEG00000010952	ZNF628 (ENSODEG00000009941) #12	SHISA7 (ENSODEG00000010663)	C19orf85 (ENSODEG00000011049) #13	ISOC2 (ENSODEG00000010105) #14	ENSODEG00000011615 #15	ENSODEG00000010391 ##16	TMEM190 (ENSODEG00000009911) #17	IL11 (ENSODEG00000010163) #18	COX6B2 (ENSODEG00000010701) #20	KMT5C (ENSODEG00000010521) #21	TMEM150B (ENSODEG00000010863) #22	BRSK1 (ENSODEG00000014498) #23	HSPBP1 (ENSODEG00000010633) #24	ENSODEG00000011540 #25	TMEM86B (ENSODEG00000011909) #26	ENSODEG00000012643 #27	SYT5 (ENSODEG00000011988) #28	DNAAF3 (ENSODEG00000010996) #29	TNNI3 (ENSODEG00000011412) #30	TNNT1 (ENSODEG00000010639) #31	PPP1R12C (ENSODEG00000010142) #32	EPS8L1 (ENSODEG00000011275) #33	RDH13 (ENSODEG00000011963) #34	ENSODEG00000020005	ENSODEG00000012519 ##35
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000049682	ZNF524 (ENSHGLG00000042863)	FIZ1 (ENSHGLG00000049423)	ENSHGLG00000050249	ENSHGLG00000015309	SBK2 (ENSHGLG00000035076) #9	ENSHGLG00000035277	NAT14 (ENSHGLG00000033788) #11	ISOC2 (ENSHGLG00000036834) #14	ENSHGLG00000034906 #15	RPL28 (ENSHGLG00000040310) ##16	TMEM238 (ENSHGLG00000042230)	IL11 (ENSHGLG00000039159) #18	COX6B2 (ENSHGLG00000043169) #20	KMT5C (ENSHGLG00000046126) #21	ENSHGLG00000014752 #22	ENSHGLG00000048831	ENSHGLG00000004906 #23	ENSHGLG00000040140 #23	ENSHGLG00000049528 #24	ENSHGLG00000043133 #25	ENSHGLG00000044106	ENSHGLG00000015452	ENSHGLG00000016036 #27	SYT5 (ENSHGLG00000015144) #28	ENSHGLG00000016420 #29	TNNI3 (ENSHGLG00000035434) #30	TNNT1 (ENSHGLG00000009790) #31	ENSHGLG00000047300 #32	ENSHGLG00000045855 #32	ENSHGLG00000009349 #33
Rodentia_B	ANCESTRAL SPECIES	38	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Myomorpha	ANCESTRAL SPECIES	44	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Muroidea	ANCESTRAL SPECIES	49	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Muroidea_A	ANCESTRAL SPECIES	29	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Cricetidae	ANCESTRAL SPECIES	32	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a.a ##35
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	41	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b.m #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ##35
Golden Hamster	MODERN SPECIES	780	Sbk2 (ENSMAUG00000017604) #9	Ssc5d (ENSMAUG00000005073) #10	Nat14 (ENSMAUG00000001020) #11	Zfp628 (ENSMAUG00000003007) #12	Gm36210 (ENSMAUG00000000539) #13	Isoc2a (ENSMAUG00000015826) #14	Isoc2b (ENSMAUG00000014693) #14	Shisa7 (ENSMAUG00000019580)	ENSMAUG00000013530 #15	ENSMAUG00000021147 ##16	Tmem190 (ENSMAUG00000012404) #17	Il11 (ENSMAUG00000011999) #18	Garin5b (ENSMAUG00000008250) #19	Cox6b2 (ENSMAUG00000015631) #20	Kmt5c (ENSMAUG00000017071) #21	Tmem150b (ENSMAUG00000010769) #22	Brsk1 (ENSMAUG00000021219) #23	Hspbp1 (ENSMAUG00000011739) #24	ENSMAUG00000017712 #25	Tmem86b (ENSMAUG00000001471) #26	ENSMAUG00000001061 #27	ENSMAUG00000006393	Syt5 (ENSMAUG00000021598) #28	ENSMAUG00000007012	Dnaaf3 (ENSMAUG00000008314) #29	Tnni3 (ENSMAUG00000015860) #30	Tnnt1 (ENSMAUG00000020911) #31	Ppp1r12c (ENSMAUG00000021347) #32	ENSMAUG00000019917 #33	ENSMAUG00000017155 #33	Rdh13 (ENSMAUG00000008074) #34
Chinese hamster chok1gshd	MODERN SPECIES	291	ENSCGRG00001018494	Ncr1 (ENSCGRG00001018023) ##35	Gp6 (ENSCGRG00001017468) #35	Rdh13 (ENSCGRG00001000111) #34	Eps8l1 (ENSCGRG00001016460) #33	Ppp1r12c (ENSCGRG00001014724) #32	Tnnt1 (ENSCGRG00001007905) #31	Tnni3 (ENSCGRG00001001291) #30	Syt5 (ENSCGRG00001000314) #28	Dnaaf3 (ENSCGRG00001022238) #29	ENSCGRG00001021207 #27	Tmem86b (ENSCGRG00001020804) #26	Ppp6r1 (ENSCGRG00001017539) #25	Hspbp1 (ENSCGRG00001016579) #24	ENSCGRG00001010604 #23	ENSCGRG00001010330 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001009751 #22	Kmt5c (ENSCGRG00001006665) #21	Cox6b2 (ENSCGRG00001005078) #20	Garin5b (ENSCGRG00001003270) #19	Il11 (ENSCGRG00001001006) #18	Tmem190 (ENSCGRG00001000742) #17	Tmem238 (ENSCGRG00001015349)	Rpl28 (ENSCGRG00001023644) ##16	ENSCGRG00001023450 #15	Shisa7 (ENSCGRG00001023119)	Isoc2b (ENSCGRG00001001738) #14	Isoc2a (ENSCGRG00001021232) #14	Gm36210 (ENSCGRG00001020139) #13	Zfp628 (ENSCGRG00001019468) #12
Cricetinae	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b.n #22
Chinese hamster chok1gshd	MODERN SPECIES	291	Ssc5d (ENSCGRG00001015562) #10	Nat14 (ENSCGRG00001018762) #11	Zfp628 (ENSCGRG00001019468) #12	Gm36210 (ENSCGRG00001020139) #13	Isoc2a (ENSCGRG00001021232) #14	Isoc2b (ENSCGRG00001001738) #14	Shisa7 (ENSCGRG00001023119)	ENSCGRG00001023450 #15	Rpl28 (ENSCGRG00001023644) ##16	Tmem238 (ENSCGRG00001015349)	Tmem190 (ENSCGRG00001000742) #17	Il11 (ENSCGRG00001001006) #18	Garin5b (ENSCGRG00001003270) #19	Cox6b2 (ENSCGRG00001005078) #20	Kmt5c (ENSCGRG00001006665) #21	ENSCGRG00001009751 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001010330 #22	ENSCGRG00001010604 #23	Hspbp1 (ENSCGRG00001016579) #24	Ppp6r1 (ENSCGRG00001017539) #25	Tmem86b (ENSCGRG00001020804) #26	ENSCGRG00001021207 #27	Dnaaf3 (ENSCGRG00001022238) #29	Syt5 (ENSCGRG00001000314) #28	Tnni3 (ENSCGRG00001001291) #30	Tnnt1 (ENSCGRG00001007905) #31	Ppp1r12c (ENSCGRG00001014724) #32	Eps8l1 (ENSCGRG00001016460) #33	Rdh13 (ENSCGRG00001000111) #34	Gp6 (ENSCGRG00001017468) #35
Cricetidae_B	ANCESTRAL SPECIES	52	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Northern American deer mouse	MODERN SPECIES		Zfp579 (ENSPEMG00000023581) #7	Sbk3 (ENSPEMG00000015238) #8	Sbk2 (ENSPEMG00000023715) #9	Ssc5d (ENSPEMG00000024246) #10	Nat14 (ENSPEMG00000026040) #11	Zfp628 (ENSPEMG00000009113) #12	Gm36210 (ENSPEMG00000007566) #13	Isoc2a (ENSPEMG00000011522) #14	Isoc2b (ENSPEMG00000023204) #14	ENSPEMG00000018016 #15	Rpl28 (ENSPEMG00000011755) ##16	Tmem190 (ENSPEMG00000017246) #17	Il11 (ENSPEMG00000016289) #18	ENSPEMG00000023825 #20	Kmt5c (ENSPEMG00000023982) #21	Tmem150b (ENSPEMG00000001799) #22	Brsk1 (ENSPEMG00000013836) #23	Hspbp1 (ENSPEMG00000000260) #24	Ppp6r1 (ENSPEMG00000009931) #25	Tmem86b (ENSPEMG00000028554) #26	Hif3a (ENSPEMG00000017981)	Ppp5c (ENSPEMG00000012984)	Ccdc8 (ENSPEMG00000012412)	Pnma8a (ENSPEMG00000006770)	Pnma8b (ENSPEMG00000025557)	Calm3 (ENSPEMG00000027101)	Ptgir (ENSPEMG00000016407)	Gng8 (ENSPEMG00000015160)	Dact3 (ENSPEMG00000016882)	Prkd2 (ENSPEMG00000016539)	Strn4 (ENSPEMG00000008347)
Prairie vole	MODERN SPECIES	130	Ssc5d (ENSMOCG00000013013) #10	Nat14 (ENSMOCG00000002976) #11	Zfp628 (ENSMOCG00000020296) #12	Gm36210 (ENSMOCG00000008673) #13	Isoc2a (ENSMOCG00000000175) #14	Isoc2b (ENSMOCG00000014429) #14	Shisa7 (ENSMOCG00000002160)	ENSMOCG00000002346 #15	Rpl28 (ENSMOCG00000006245) ##16	Tmem238 (ENSMOCG00000000051)	Tmem190 (ENSMOCG00000000461) #17	Il11 (ENSMOCG00000012859) #18	ENSMOCG00000019215 #19	Cox6b2 (ENSMOCG00000007830) #20	Kmt5c (ENSMOCG00000013978) #21	Tmem150b (ENSMOCG00000006716) #22	Brsk1 (ENSMOCG00000012734) #23	Hspbp1 (ENSMOCG00000016855) #24	Ppp6r1 (ENSMOCG00000021392) #25	Tmem86b (ENSMOCG00000007183) #26	Syt5 (ENSMOCG00000015939) #28	Dnaaf3 (ENSMOCG00000018937) #29	Tnni3 (ENSMOCG00000003904) #30	Tnnt1 (ENSMOCG00000016771) #31	Ppp1r12c (ENSMOCG00000021994) #32	ENSMOCG00000019191 #33	Rdh13 (ENSMOCG00000001774) #34	ENSMOCG00000006750	Gp6 (ENSMOCG00000005915) #35	Ncr1 (ENSMOCG00000015667) ##35	ENSMOCG00000010977 ##35
Murinae	ANCESTRAL SPECIES	34	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Mus	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##35
Mus_B	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##35
Mouse	MODERN SPECIES	16	Ssc5d (ENSMUSG00000035279) #10	Nat14 (ENSMUSG00000035285) #11	Zfp628 (ENSMUSG00000074406) #12	Gm36210 (ENSMUSG00000110221) #13	Isoc2a (ENSMUSG00000086784) #14	Isoc2b (ENSMUSG00000052605) #14	Shisa7 (ENSMUSG00000053550)	Ube2s (ENSMUSG00000060860) #15	Rpl28 (ENSMUSG00000030432) ##16	Tmem238 (ENSMUSG00000030431)	Tmem190 (ENSMUSG00000013091) #17	Il11 (ENSMUSG00000004371) #18	Garin5b (ENSMUSG00000092518) #19	Cox6b2 (ENSMUSG00000051811) #20	Kmt5c (ENSMUSG00000059851) #21	Tmem150b (ENSMUSG00000046456) #22	Brsk1 (ENSMUSG00000035390) #23	Hspbp1 (ENSMUSG00000063802) #24	Ppp6r1 (ENSMUSG00000052296) #25	Tmem86b (ENSMUSG00000045282) #26	Ptprh (ENSMUSG00000035429) #27	Syt5 (ENSMUSG00000004961) #28	Dnaaf3 (ENSMUSG00000055809) #29	Tnni3 (ENSMUSG00000035458) #30	Tnnt1 (ENSMUSG00000064179) #31	Ppp1r12c (ENSMUSG00000019254) #32	Eps8l1 (ENSMUSG00000006154) #33	Rdh13 (ENSMUSG00000008435) #34	Gp6 (ENSMUSG00000078810) #35	Ncr1 (ENSMUSG00000062524) ##35	Lilra5 (ENSMUSG00000070873) ##35
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##35
spretus	MODERN SPECIES	16	Sbk2 (MGP_SPRETEiJ_G0030191) #9	Ssc5d (MGP_SPRETEiJ_G0030190) #10	Nat14 (MGP_SPRETEiJ_G0030189) #11	Zfp628 (MGP_SPRETEiJ_G0030188) #12	Isoc2a (MGP_SPRETEiJ_G0030187) #14	Isoc2b (MGP_SPRETEiJ_G0030186) #14	Shisa7 (MGP_SPRETEiJ_G0030185)	MGP_SPRETEiJ_G0030184 #15	Rpl28 (MGP_SPRETEiJ_G0030183) ##16	Tmem238 (MGP_SPRETEiJ_G0030182)	Tmem190 (MGP_SPRETEiJ_G0030181) #17	Il11 (MGP_SPRETEiJ_G0030180) #18	Garin5b (MGP_SPRETEiJ_G0030179) #19	Cox6b2 (MGP_SPRETEiJ_G0030178) #20	Kmt5c (MGP_SPRETEiJ_G0030177) #21	Tmem150b (MGP_SPRETEiJ_G0030176) #22	Brsk1 (MGP_SPRETEiJ_G0030175) #23	Hspbp1 (MGP_SPRETEiJ_G0030174) #24	Ppp6r1 (MGP_SPRETEiJ_G0030173) #25	Tmem86b (MGP_SPRETEiJ_G0030172) #26	MGP_SPRETEiJ_G0030171 #27	Syt5 (MGP_SPRETEiJ_G0030170) #28	Dnaaf3 (MGP_SPRETEiJ_G0030169) #29	Tnni3 (MGP_SPRETEiJ_G0030168) #30	Tnnt1 (MGP_SPRETEiJ_G0030167) #31	Ppp1r12c (MGP_SPRETEiJ_G0030166) #32	Eps8l1 (MGP_SPRETEiJ_G0030165) #33	Rdh13 (MGP_SPRETEiJ_G0030164) #34	Gp6 (MGP_SPRETEiJ_G0030163) #35	Ncr1 (MGP_SPRETEiJ_G0030162) ##35	Lilra5 (MGP_SPRETEiJ_G0030161) ##35
Steppe mouse	MODERN SPECIES	2558						ENSMSIG00000001790 #14	Shisa7 (ENSMSIG00000001835)	ENSMSIG00000001918 #15	Rpl28 (ENSMSIG00000001946) ##16	Tmem238 (ENSMSIG00000001964)	Tmem190 (ENSMSIG00000001978) #17	Il11 (ENSMSIG00000002035) #18	Garin5b (ENSMSIG00000002061) #19	ENSMSIG00000002138 #20	Kmt5c (ENSMSIG00000002231) #21	Tmem150b (ENSMSIG00000002314) #22	Brsk1 (ENSMSIG00000002411) #23	Hspbp1 (ENSMSIG00000002668) #24	Ppp6r1 (ENSMSIG00000002691) #25	ENSMSIG00000002750	Tmem86b (ENSMSIG00000002765) #26	ENSMSIG00000002795 #27	Syt5 (ENSMSIG00000002866) #28	Dnaaf3 (ENSMSIG00000002922) #29	ENSMSIG00000002977 #30	Tnnt1 (ENSMSIG00000003052) #31	Ppp1r12c (ENSMSIG00000003464) #32	Eps8l1 (ENSMSIG00000003576) #33	Rdh13 (ENSMSIG00000003759) #34	ENSMSIG00000003796	Gp6 (ENSMSIG00000003816) #35
Ryukyu mouse	MODERN SPECIES	16	Sbk2 (MGP_CAROLIEiJ_G0029138) #9	Ssc5d (MGP_CAROLIEiJ_G0029137) #10	Nat14 (MGP_CAROLIEiJ_G0029136) #11	Zfp628 (MGP_CAROLIEiJ_G0029135) #12	Isoc2a (MGP_CAROLIEiJ_G0029134) #14	Isoc2b (MGP_CAROLIEiJ_G0029133) #14	Shisa7 (MGP_CAROLIEiJ_G0029132)	MGP_CAROLIEiJ_G0029131 #15	Rpl28 (MGP_CAROLIEiJ_G0029130) ##16	Tmem238 (MGP_CAROLIEiJ_G0029129)	Tmem190 (MGP_CAROLIEiJ_G0029128) #17	Il11 (MGP_CAROLIEiJ_G0029127) #18	Garin5b (MGP_CAROLIEiJ_G0029126) #19	Cox6b2 (MGP_CAROLIEiJ_G0029125) #20	Kmt5c (MGP_CAROLIEiJ_G0029124) #21	Tmem150b (MGP_CAROLIEiJ_G0029123) #22	Brsk1 (MGP_CAROLIEiJ_G0029122) #23	Hspbp1 (MGP_CAROLIEiJ_G0029121) #24	Ppp6r1 (MGP_CAROLIEiJ_G0029120) #25	Tmem86b (MGP_CAROLIEiJ_G0029119) #26	Syt5 (MGP_CAROLIEiJ_G0029117) #28	MGP_CAROLIEiJ_G0029116 #29	Tnni3 (MGP_CAROLIEiJ_G0029115) #30	Tnnt1 (MGP_CAROLIEiJ_G0029114) #31	Ppp1r12c (MGP_CAROLIEiJ_G0029113) #32	Eps8l1 (MGP_CAROLIEiJ_G0029112) #33	MGP_CAROLIEiJ_G0029111 #34	MGP_CAROLIEiJ_G0029110 #35	Ncr1 (MGP_CAROLIEiJ_G0029109) ##35	MGP_CAROLIEiJ_G0029108 ##35	Cdc42ep5 (MGP_CAROLIEiJ_G0029107)
Shrew mouse	MODERN SPECIES	10	Sbk3 (MGP_PahariEiJ_G0021007) #8	Sbk2 (MGP_PahariEiJ_G0021006) #9	Ssc5d (MGP_PahariEiJ_G0021005) #10	Nat14 (MGP_PahariEiJ_G0021004) #11	Zfp628 (MGP_PahariEiJ_G0021003) #12	Isoc2b (MGP_PahariEiJ_G0021002) #14	Shisa7 (MGP_PahariEiJ_G0021001)	MGP_PahariEiJ_G0021000 #15	Rpl28 (MGP_PahariEiJ_G0020999) ##16	Tmem238 (MGP_PahariEiJ_G0020998)	Tmem190 (MGP_PahariEiJ_G0020997) #17	Il11 (MGP_PahariEiJ_G0020996) #18	Garin5b (MGP_PahariEiJ_G0020995) #19	Cox6b2 (MGP_PahariEiJ_G0020994) #20	Kmt5c (MGP_PahariEiJ_G0020993) #21	Tmem150b (MGP_PahariEiJ_G0020992) #22	Brsk1 (MGP_PahariEiJ_G0020991) #23	Hspbp1 (MGP_PahariEiJ_G0020990) #24	Ppp6r1 (MGP_PahariEiJ_G0020989) #25	Tmem86b (MGP_PahariEiJ_G0020988) #26	MGP_PahariEiJ_G0020987 #27	Syt5 (MGP_PahariEiJ_G0020986) #28	MGP_PahariEiJ_G0020985 #29	Tnni3 (MGP_PahariEiJ_G0020984) #30	Tnnt1 (MGP_PahariEiJ_G0020983) #31	Ppp1r12c (MGP_PahariEiJ_G0020982) #32	Eps8l1 (MGP_PahariEiJ_G0020981) #33	MGP_PahariEiJ_G0020980 #34	Gp6 (MGP_PahariEiJ_G0020979) #35	Nlrp2 (MGP_PahariEiJ_G0020978) #36	Ncr1 (MGP_PahariEiJ_G0020977) ##35
Rat	MODERN SPECIES		Sbk2 (ENSRNOG00000038625) #9	Ssc5d (ENSRNOG00000016687) #10	Nat14 (ENSRNOG00000038622) #12	Nat14 (ENSRNOG00000067958) #11	LOC684792 (ENSRNOG00000069979) #13	Isoc2a (ENSRNOG00000050348) #14	Isoc2b (ENSRNOG00000016829) #14	Shisa7 (ENSRNOG00000016877)	Ube2s (ENSRNOG00000016930) #15	Rpl28 (ENSRNOG00000017127) ##16	Tmem238 (ENSRNOG00000070914)	Tmem190 (ENSRNOG00000042528) #17	Il11 (ENSRNOG00000017386) #18	Garin5b (ENSRNOG00000033173) #19	Kmt5c (ENSRNOG00000017508) #21	Tmem150b (ENSRNOG00000028273) #22	Brsk1 (ENSRNOG00000017673) #23	Hspbp1 (ENSRNOG00000017795) #24	Ptprh (ENSRNOG00000058906) #27	Syt5 (ENSRNOG00000018217) #28	Dnaaf3 (ENSRNOG00000038600) #29	Tnni3 (ENSRNOG00000018250) #30	Tnnt1 (ENSRNOG00000028041) #31	Ppp1r12c (ENSRNOG00000053828) #32	Eps8l1 (ENSRNOG00000027942) #33	Rdh13 (ENSRNOG00000027919) #34	ENSRNOG00000062480 #35	Gp6 (ENSRNOG00000047204) #35	Nlrp2 (ENSRNOG00000049759) #36	Ncr1 (ENSRNOG00000027855) ##35	ENSRNOG00000066198
Upper Galilee mountains blind mole rat	MODERN SPECIES	1343	ENSNGAG00000014744	Ssc5d (ENSNGAG00000011192) #10	Nat14 (ENSNGAG00000011835) #11	Zfp628 (ENSNGAG00000012888) #12	Gm36210 (ENSNGAG00000014245) #13	Isoc2a (ENSNGAG00000016018) #14	Isoc2b (ENSNGAG00000003558) #14	Shisa7 (ENSNGAG00000008607)	ENSNGAG00000012718 #15	ENSNGAG00000016459 ##16	Tmem238 (ENSNGAG00000018226)	Tmem190 (ENSNGAG00000020448) #17	Il11 (ENSNGAG00000020282) #18	Cox6b2 (ENSNGAG00000000236) #20	Kmt5c (ENSNGAG00000002716) #21	ENSNGAG00000008679 #22	Brsk1 (ENSNGAG00000011472) #23	Hspbp1 (ENSNGAG00000017292) #24	ENSNGAG00000000503 #25	Tmem86b (ENSNGAG00000006434) #26	Ptprh (ENSNGAG00000018436) #27	Syt5 (ENSNGAG00000005623) #28	Dnaaf3 (ENSNGAG00000007936) #29	Tnni3 (ENSNGAG00000010137) #30	Tnnt1 (ENSNGAG00000005191) #31	Ppp1r12c (ENSNGAG00000015614) #32	ENSNGAG00000018836 #33	ENSNGAG00000000920 #33	Rdh13 (ENSNGAG00000001835) #34	ENSNGAG00000002403
Lesser Egyptian jerboa	MODERN SPECIES	249							ENSJJAG00000002909 #14	Shisa7 (ENSJJAG00000000151)	ENSJJAG00000019857 #15	Rpl28 (ENSJJAG00000019841) ##16	Tmem190 (ENSJJAG00000019474) #17	Il11 (ENSJJAG00000018984) #18	ENSJJAG00000018518 #19	Cox6b2 (ENSJJAG00000001150) #20	Kmt5c (ENSJJAG00000000222) #21	Tmem150b (ENSJJAG00000023317) #22	Brsk1 (ENSJJAG00000021973) #23	Hspbp1 (ENSJJAG00000020815) #24	ENSJJAG00000020637 #25	Tmem86b (ENSJJAG00000020487) #26	Ptprh (ENSJJAG00000015231) #27	Syt5 (ENSJJAG00000014748) #28	Dnaaf3 (ENSJJAG00000013059) #29	Tnni3 (ENSJJAG00000011375) #30	Tnnt1 (ENSJJAG00000014149) #31	Ppp1r12c (ENSJJAG00000010783) #32	ENSJJAG00000009977 #33	ENSJJAG00000008371 #33	Gp6 (ENSJJAG00000003429) #35	Ncr1 (ENSJJAG00000001068) ##35
Kangaroo rat	MODERN SPECIES	508	Zfp865 (ENSDORG00000023200)	ENSDORG00000003689	ENSDORG00000025623	Sbk2 (ENSDORG00000000880) #9	Ssc5d (ENSDORG00000000879) #10	Nat14 (ENSDORG00000000878) #11	Zfp628 (ENSDORG00000000876) #12	ENSDORG00000012815 #14	Shisa7 (ENSDORG00000026157)	ENSDORG00000012810 #15	Rpl28 (ENSDORG00000012809) ##16	Tmem190 (ENSDORG00000012807) #17	Il11 (ENSDORG00000012806) #18	Cox6b2 (ENSDORG00000012804) #20	Kmt5c (ENSDORG00000027615) #21	Tmem150b (ENSDORG00000012800) #22	Brsk1 (ENSDORG00000012799) #23	Hspbp1 (ENSDORG00000012796) #24	ENSDORG00000005202 #25	Tmem86b (ENSDORG00000005200) #26	Syt5 (ENSDORG00000011579) #28	Dnaaf3 (ENSDORG00000011578) #29	Tnni3 (ENSDORG00000011574) #30	Tnnt1 (ENSDORG00000011568) #31	Ppp1r12c (ENSDORG00000008039) #32	Eps8l1 (ENSDORG00000008033) #33	Rdh13 (ENSDORG00000008030) #34
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b	ENSGT01100000263478.b.a.b.a #35
Eulipotyphla	ANCESTRAL SPECIES	1782																ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23
Common shrew	MODERN SPECIES	4125																ENSSARG00000011115 #22	BRSK1 (ENSSARG00000011079) #23
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000169278	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Suina	ANCESTRAL SPECIES	45	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Pig	MODERN SPECIES	14	SBK2 (ENSSSCG00000033532) #9	SSC5D (ENSSSCG00000037450) #10	NAT14 (ENSSSCG00000058832) #11	ZNF628 (ENSSSCG00000025343) #12	C19orf85 (ENSSSCG00000049623) #13	ISOC2 (ENSSSCG00000003289) #14	SHISA7 (ENSSSCG00000035924)	UBE2S (ENSSSCG00000035344) #15	RPL28 (ENSSSCG00000039460) ##16	TMEM238 (ENSSSCG00000035417)	TMEM190 (ENSSSCG00000052569) #17	IL11 (ENSSSCG00000040725) #18	GARIN5B (ENSSSCG00000051187) #19	COX6B2 (ENSSSCG00000035612) #20	KMT5C (ENSSSCG00000035829) #21	TMEM150B (ENSSSCG00000057251) #22	BRSK1 (ENSSSCG00000032656) #23	HSPBP1 (ENSSSCG00000003288) #24	PPP6R1 (ENSSSCG00000003301) #25	ENSSSCG00000003302 #26	PTPRH (ENSSSCG00000024567) #27	SYT5 (ENSSSCG00000021843) #28	DNAAF3 (ENSSSCG00000042884) #29	TNNI3 (ENSSSCG00000043687) #30	TNNT1 (ENSSSCG00000025353) #31	PPP1R12C (ENSSSCG00000027189) #32	EPS8L1 (ENSSSCG00000026417) #33	RDH13 (ENSSSCG00000038287) #34	ENSSSCG00000026365 #35	ENSSSCG00000003277 #36	NLRP2B (ENSSSCG00000053371)
Chacoan peccary	MODERN SPECIES	128	SBK3 (ENSCWAG00000007872) #8	SBK2 (ENSCWAG00000007837) #9	SSC5D (ENSCWAG00000020924) #10	NAT14 (ENSCWAG00000020912) #11	ZNF628 (ENSCWAG00000020905) #12	C19orf85 (ENSCWAG00000020895) #13	ISOC2 (ENSCWAG00000020859) #14	SHISA7 (ENSCWAG00000020841)	UBE2S (ENSCWAG00000020830) #15	ENSCWAG00000020827 ##16	TMEM238 (ENSCWAG00000020818)	TMEM190 (ENSCWAG00000020807) #17	IL11 (ENSCWAG00000020794) #18	COX6B2 (ENSCWAG00000020786) #20	KMT5C (ENSCWAG00000020772) #21	TMEM150B (ENSCWAG00000020753) #22	BRSK1 (ENSCWAG00000020694) #23	HSPBP1 (ENSCWAG00000020679) #24	PPP6R1 (ENSCWAG00000020664) #25	TMEM86B (ENSCWAG00000020640) #26	ENSCWAG00000020637 #27	SYT5 (ENSCWAG00000020605) #28	DNAAF3 (ENSCWAG00000020569) #29	TNNI3 (ENSCWAG00000020543) #30	TNNT1 (ENSCWAG00000020338) #31	PPP1R12C (ENSCWAG00000020287) #32	ENSCWAG00000020266 #33	RDH13 (ENSCWAG00000020247) #34	ENSCWAG00000020193 #35	ENSCWAG00000020176 ##36	NLRP2B (ENSCWAG00000020168)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b.l #16	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Cetacea	ANCESTRAL SPECIES	6	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.a.a.a.a.b ##35
Odontoceti_a	ANCESTRAL SPECIES	29	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.a.a.a.a.b ##35
Dolphin	MODERN SPECIES	358															KMT5C (ENSTTRG00000000574) #21	TMEM150B (ENSTTRG00000000573) #22	BRSK1 (ENSTTRG00000000570) #23	ENSTTRG00000000568 #24
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b.l #16	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a.e.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.a.a.a.a.b ##35
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a.e.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35	ENSGT01100000263478.b.a.b.b.a.a.a.a.b ##35
Narwhal	MODERN SPECIES	296	SBK2 (ENSMMNG00015003152) #9	SSC5D (ENSMMNG00015003077) #10	NAT14 (ENSMMNG00015003035) #11	ZNF628 (ENSMMNG00015003025) #12	C19orf85 (ENSMMNG00015003007) #13	ISOC2 (ENSMMNG00015002976) #14	SHISA7 (ENSMMNG00015002949)	UBE2S (ENSMMNG00015002927) #15	RPL28 (ENSMMNG00015002911) ##16	TMEM238 (ENSMMNG00015002895)	TMEM190 (ENSMMNG00015002886) #17	IL11 (ENSMMNG00015002870) #18	ENSMMNG00015002858	COX6B2 (ENSMMNG00015002844) #20	KMT5C (ENSMMNG00015002826) #21	TMEM150B (ENSMMNG00015002808) #22	BRSK1 (ENSMMNG00015002744) #23	HSPBP1 (ENSMMNG00015002714) #24	PPP6R1 (ENSMMNG00015002680) #25	TMEM86B (ENSMMNG00015002654) #26	SYT5 (ENSMMNG00015002642) #28	DNAAF3 (ENSMMNG00015002622) #29	TNNI3 (ENSMMNG00015002594) #30	TNNT1 (ENSMMNG00015002485) #31	PPP1R12C (ENSMMNG00015002386) #32	EPS8L1 (ENSMMNG00015002333) #33	RDH13 (ENSMMNG00015002297) #34	ENSMMNG00015002240 #35	ENSMMNG00015002135 ##36	NCR1 (ENSMMNG00015002060) ##35	FCAR (ENSMMNG00015001921) ##35
Beluga whale	MODERN SPECIES	14	ZNF579 (ENSDLEG00000001988) #7	SBK3 (ENSDLEG00000001997)	SSC5D (ENSDLEG00000002024) #10	NAT14 (ENSDLEG00000002068) #11	ZNF628 (ENSDLEG00000002080) #12	ISOC2 (ENSDLEG00000002095) #14	SHISA7 (ENSDLEG00000002117)	UBE2S (ENSDLEG00000002127) #15	ENSDLEG00000002137 #16	TMEM238 (ENSDLEG00000002142)	TMEM190 (ENSDLEG00000002150) #17	ENSDLEG00000004720 #18	ENSDLEG00000004723	ENSDLEG00000004730 #20	KMT5C (ENSDLEG00000004741) #21	TMEM150B (ENSDLEG00000004753) #22	BRSK1 (ENSDLEG00000004776) #23	HSPBP1 (ENSDLEG00000004809) #24	PPP6R1 (ENSDLEG00000004825) #25	TMEM86B (ENSDLEG00000004847) #26	SYT5 (ENSDLEG00000004855) #28	DNAAF3 (ENSDLEG00000004859) #29	TNNI3 (ENSDLEG00000004874) #30	TNNT1 (ENSDLEG00000004891) #31	PPP1R12C (ENSDLEG00000004955) #32	EPS8L1 (ENSDLEG00000005125) #33	RDH13 (ENSDLEG00000005143) #34	ENSDLEG00000005149 #35	ENSDLEG00000005171 ##36	NCR1 (ENSDLEG00000005229) ##35	ENSDLEG00000005305 ##35
Vaquita	MODERN SPECIES	10	SBK3 (ENSPSNG00000005827) #8	SBK2 (ENSPSNG00000005854) #9	SSC5D (ENSPSNG00000005888) #10	NAT14 (ENSPSNG00000005919) #11	ZNF628 (ENSPSNG00000005937) #12	C19orf85 (ENSPSNG00000005951) #13	ISOC2 (ENSPSNG00000006012) #14	SHISA7 (ENSPSNG00000006065)	UBE2S (ENSPSNG00000006085) #15	ENSPSNG00000006132 #16	TMEM190 (ENSPSNG00000006203) #17	IL11 (ENSPSNG00000006238) #18	ENSPSNG00000006279	COX6B2 (ENSPSNG00000006311) #20	KMT5C (ENSPSNG00000006345) #21	TMEM150B (ENSPSNG00000006402) #22	BRSK1 (ENSPSNG00000006448) #23	HSPBP1 (ENSPSNG00000006538) #24	PPP6R1 (ENSPSNG00000006597) #25	TMEM86B (ENSPSNG00000006698) #26	SYT5 (ENSPSNG00000006728) #28	DNAAF3 (ENSPSNG00000006775) #29	TNNI3 (ENSPSNG00000006801) #30	TNNT1 (ENSPSNG00000006859) #31	PPP1R12C (ENSPSNG00000006943) #32	ENSPSNG00000006989 #33	RDH13 (ENSPSNG00000007086) #34	ENSPSNG00000007163 #35	ENSPSNG00000007266 ##36	NCR1 (ENSPSNG00000007339) ##35	FCAR (ENSPSNG00000007547) ##35
Sperm whale	MODERN SPECIES	412													ENSPCTG00005020895	COX6B2 (ENSPCTG00005020878) #20	KMT5C (ENSPCTG00005020858) #21	TMEM150B (ENSPCTG00005020811) #22
Blue whale	MODERN SPECIES	10	SBK3 (ENSBMSG00010014147) #8	SBK2 (ENSBMSG00010014172) #9	SSC5D (ENSBMSG00010014214) #10	NAT14 (ENSBMSG00010014258) #11	ZNF628 (ENSBMSG00010014275) #12	C19orf85 (ENSBMSG00010014296) #13	ISOC2 (ENSBMSG00010014328) #14	SHISA7 (ENSBMSG00010014377)	UBE2S (ENSBMSG00010014413) #15	KMT5C (ENSBMSG00010014483) #21	TMEM238 (ENSBMSG00010014567)	TMEM190 (ENSBMSG00010014585) #17	IL11 (ENSBMSG00010014629) #18	ENSBMSG00010014670	ENSBMSG00010014699 #20	TMEM150B (ENSBMSG00010014730) #22	BRSK1 (ENSBMSG00010014787) #23	HSPBP1 (ENSBMSG00010015014) #24	PPP6R1 (ENSBMSG00010015058) #25	ENSBMSG00010015153 #26	ENSBMSG00010015188 #27	SYT5 (ENSBMSG00010015237) #28	DNAAF3 (ENSBMSG00010015271) #29	TNNI3 (ENSBMSG00010015355) #30	TNNT1 (ENSBMSG00010015457) #31	PPP1R12C (ENSBMSG00010015571) #32	EPS8L1 (ENSBMSG00010015674) #33	RDH13 (ENSBMSG00010016022) #34	ENSBMSG00010016074 #35	ENSBMSG00010016193 ##36	NCR1 (ENSBMSG00010016405) ##35
Pecora	ANCESTRAL SPECIES	35	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Yarkand deer	MODERN SPECIES	27	SBK2 (ENSCHYG00000007806) #9	SSC5D (ENSCHYG00000007835) #10	NAT14 (ENSCHYG00000007961) #11	ZNF628 (ENSCHYG00000007983) #12	C19orf85 (ENSCHYG00000007999) #13	ISOC2 (ENSCHYG00000008018) #14	SHISA7 (ENSCHYG00000008066)	UBE2S (ENSCHYG00000008105) #15	ENSCHYG00000008157 #16	TMEM238 (ENSCHYG00000008192)	TMEM190 (ENSCHYG00000008224) #17	IL11 (ENSCHYG00000008300) #18	ENSCHYG00000008331 #19	COX6B2 (ENSCHYG00000008355) #20	KMT5C (ENSCHYG00000008392) #21	ENSCHYG00000008445 #22	BRSK1 (ENSCHYG00000008503) #23	HSPBP1 (ENSCHYG00000008731) #24	TMEM86B (ENSCHYG00000009536) #26	ENSCHYG00000009577 #27	SYT5 (ENSCHYG00000009690) #28	DNAAF3 (ENSCHYG00000009856) #29	TNNT1 (ENSCHYG00000010424) #31	PPP1R12C (ENSCHYG00000010810) #32	EPS8L1 (ENSCHYG00000011064) #33	RDH13 (ENSCHYG00000011271) #34	ENSCHYG00000011339 #35	NLRP2 (ENSCHYG00000011544) #36	ENSCHYG00000011676 ##36	NCR1 (ENSCHYG00000011836) ##35	ENSCHYG00000011971 ##35
Percora_a	ANCESTRAL SPECIES	32	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Bovidae	ANCESTRAL SPECIES	31	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Caprinae	ANCESTRAL SPECIES	34	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Rambouillet Sheep	MODERN SPECIES	5	SBK2 (ENSOARG00020004175) #9	SSC5D (ENSOARG00020004206) #10	NAT14 (ENSOARG00020004288) #11	ZNF628 (ENSOARG00020004313) #12	C19orf85 (ENSOARG00020004326) #13	ISOC2 (ENSOARG00020004350) #14	SHISA7 (ENSOARG00020004384)	UBE2S (ENSOARG00020004403) #15	RPL28 (ENSOARG00020004422) ##16	TMEM238 (ENSOARG00020004458)	TMEM190 (ENSOARG00020004471) #17	ENSOARG00020004510 #18	ENSOARG00020004544	COX6B2 (ENSOARG00020004558) #20	KMT5C (ENSOARG00020004589) #21	TMEM150B (ENSOARG00020004626) #22	BRSK1 (ENSOARG00020004664) #23	HSPBP1 (ENSOARG00020004926) #24	TMEM86B (ENSOARG00020005008) #26	ENSOARG00020005036 #27	SYT5 (ENSOARG00020005101) #28	DNAAF3 (ENSOARG00020005234) #29	TNNI3 (ENSOARG00020005304) #30	TNNT1 (ENSOARG00020005414) #31	PPP1R12C (ENSOARG00020005656) #32	EPS8L1 (ENSOARG00020005724) #33	ENSOARG00020005929 #34	ENSOARG00020005978 #35	ENSOARG00020006094 #36	NLRP2B (ENSOARG00020006132)	ENSOARG00020006143 ##36
Goat	MODERN SPECIES	9	SBK3 (ENSCHIG00000023243) #8	SBK2 (ENSCHIG00000013269) #9	SSC5D (ENSCHIG00000025733) #10	NAT14 (ENSCHIG00000010342) #11	ZNF628 (ENSCHIG00000022075) #12	ISOC2 (ENSCHIG00000024639) #14	SHISA7 (ENSCHIG00000013707)	UBE2S (ENSCHIG00000025320) #15	ENSCHIG00000025540 ##16	TMEM238 (ENSCHIG00000010886)	TMEM190 (ENSCHIG00000025879) #17	IL11 (ENSCHIG00000017180) #18	ENSCHIG00000017031 #19	COX6B2 (ENSCHIG00000019110) #20	KMT5C (ENSCHIG00000009854) #21	TMEM150B (ENSCHIG00000015661) #22	BRSK1 (ENSCHIG00000025914) #23	HSPBP1 (ENSCHIG00000024781) #24	PPP6R1 (ENSCHIG00000016950) #25	TMEM86B (ENSCHIG00000026971) #26	ENSCHIG00000017601 #27	SYT5 (ENSCHIG00000002956) #28	DNAAF3 (ENSCHIG00000010818) #29	TNNI3 (ENSCHIG00000020498) #30	TNNT1 (ENSCHIG00000021226) #31	PPP1R12C (ENSCHIG00000017634) #32	EPS8L1 (ENSCHIG00000021882) #33	RDH13 (ENSCHIG00000019207) #34	ENSCHIG00000020052 #35	ENSCHIG00000020885 ##35	ENSCHIG00000024376 ##36
Bovinae	ANCESTRAL SPECIES	37	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b.l #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Bos	ANCESTRAL SPECIES	35	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b.l #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Bos_b	ANCESTRAL SPECIES		ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00940000162286.a.a.f.b.b	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00390000008732.a.b.l #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Hybrid Bos Indicus	MODERN SPECIES	9	NAT14 (ENSBIXG00005003460) #11	ZNF628 (ENSBIXG00005020464) #12	C19orf85 (ENSBIXG00005020479) #13	ENSBIXG00005020488	ENSBIXG00005020559 #14	SHISA7 (ENSBIXG00005020601)	UBE2S (ENSBIXG00005020620) #15	ENSBIXG00005020663 #16	TMEM238 (ENSBIXG00005020683)	TMEM190 (ENSBIXG00005020695) #17	IL11 (ENSBIXG00005003505) #18	ENSBIXG00005020747	ENSBIXG00005020757 #19	COX6B2 (ENSBIXG00005020816) #20	KMT5C (ENSBIXG00005020838) #21	TMEM150B (ENSBIXG00005020850) #22	BRSK1 (ENSBIXG00005020988) #23	HSPBP1 (ENSBIXG00005021036) #24	PPP6R1 (ENSBIXG00005021116) #25	TMEM86B (ENSBIXG00005003571) #26	ENSBIXG00005021162 #27	SYT5 (ENSBIXG00005021234) #28	TNNI3 (ENSBIXG00005007761) #30	TNNT1 (ENSBIXG00005021490) #31	PPP1R12C (ENSBIXG00005021572) #32	EPS8L1 (ENSBIXG00005003642) #33	ENSBIXG00005021610	RDH13 (ENSBIXG00005021637) #34	ENSBIXG00005021694 #35	NLRP2 (ENSBIXG00005006460) #36	NLRP2B (ENSBIXG00005021729)
Cow	MODERN SPECIES	9	ZNF579 (ENSBTAG00000051917) #7	SBK2 (ENSBTAG00000006121) #9	SSC5D (ENSBTAG00000030885) #10	NAT14 (ENSBTAG00000019051) #11	ZNF628 (ENSBTAG00000038034) #12	C19orf85 (ENSBTAG00000051978) #13	ENSBTAG00000050011	ISOC2 (ENSBTAG00000015950) #14	SHISA7 (ENSBTAG00000008932)	UBE2S (ENSBTAG00000009211) #15	RPL28 (ENSBTAG00000023343) ##16	TMEM190 (ENSBTAG00000021057) #17	ENSBTAG00000044157 #19	COX6B2 (ENSBTAG00000007200) #20	KMT5C (ENSBTAG00000014087) #21	TMEM150B (ENSBTAG00000022813) #22	BRSK1 (ENSBTAG00000015226) #23	HSPBP1 (ENSBTAG00000003644) #24	PPP6R1 (ENSBTAG00000021157) #25	TMEM86B (ENSBTAG00000051212) #26	PTPRH (ENSBTAG00000040559) #27	SYT5 (ENSBTAG00000002522) #28	TNNI3 (ENSBTAG00000002515) #29	TNNT1 (ENSBTAG00000006419) #31	PPP1R12C (ENSBTAG00000017847) #32	EPS8L1 (ENSBTAG00000009512) #33	RDH13 (ENSBTAG00000030393) #34	ENSBTAG00000047175 #35	NLRP2 (ENSBTAG00000047953) #36	ENSBTAG00000046383 ##35	ENSBTAG00000045854 ##35
Bos_a	ANCESTRAL SPECIES	52	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000169278	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Wild yak	MODERN SPECIES	1871								ISOC2 (ENSBMUG00000006841) #14	ENSBMUG00000006818	RPL28 (ENSBMUG00000006807) ##16	TMEM190 (ENSBMUG00000006784) #17	IL11 (ENSBMUG00000006778) #18	ENSBMUG00000006773 #19	COX6B2 (ENSBMUG00000006764) #20	ENSBMUG00000006757 #21	TMEM150B (ENSBMUG00000006749) #22	BRSK1 (ENSBMUG00000006739) #23
Domestic yak	MODERN SPECIES	12	SBK2 (ENSBGRG00000022713) #9	SSC5D (ENSBGRG00000022738) #10	NAT14 (ENSBGRG00000022856) #11	ZNF628 (ENSBGRG00000022885) #12	C19orf85 (ENSBGRG00000022912) #13	ENSBGRG00000022954 #14	ENSBGRG00000023074 #16	SHISA7 (ENSBGRG00000023112)	ENSBGRG00000023339 #15	TMEM238 (ENSBGRG00000023423)	TMEM190 (ENSBGRG00000023461) #17	IL11 (ENSBGRG00000023528) #18	ENSBGRG00000023584 #19	ENSBGRG00000012640 #20	KMT5C (ENSBGRG00000012706) #21	TMEM150B (ENSBGRG00000012760) #22	BRSK1 (ENSBGRG00000012882) #23	HSPBP1 (ENSBGRG00000013275) #24	PPP6R1 (ENSBGRG00000013315) #25	TMEM86B (ENSBGRG00000013800) #26	ENSBGRG00000013851 #27	ENSBGRG00000014020	SYT5 (ENSBGRG00000014046) #28	TNNI3 (ENSBGRG00000014260) #30	EPS8L1 (ENSBGRG00000015368) #33	ENSBGRG00000015460	RDH13 (ENSBGRG00000015481) #34	ENSBGRG00000015616	ENSBGRG00000015637 #35	ENSBGRG00000015896 #36	NLRP2B (ENSBGRG00000015964)
American bison	MODERN SPECIES	2129															KMT5C (ENSBBBG00000021223) #21	TMEM150B (ENSBBBG00000021215) #22	BRSK1 (ENSBBBG00000021208) #23
Siberian musk deer	MODERN SPECIES	78	ENSMMSG00000019856	SBK2 (ENSMMSG00000019870) #9	SSC5D (ENSMMSG00000019900) #10	NAT14 (ENSMMSG00000020003) #11	ZNF628 (ENSMMSG00000020019) #12	C19orf85 (ENSMMSG00000020030) #13	ISOC2 (ENSMMSG00000020049) #14	SHISA7 (ENSMMSG00000020074)	UBE2S (ENSMMSG00000020094) #15	RPL28 (ENSMMSG00000020114) ##16	TMEM190 (ENSMMSG00000020146) #17	IL11 (ENSMMSG00000020177) #18	ENSMMSG00000020216 #19	COX6B2 (ENSMMSG00000020243) #20	KMT5C (ENSMMSG00000020268) #21	TMEM150B (ENSMMSG00000020308) #22	BRSK1 (ENSMMSG00000020363) #23	HSPBP1 (ENSMMSG00000020498) #24	PPP6R1 (ENSMMSG00000020536) #25	TMEM86B (ENSMMSG00000020635) #26	ENSMMSG00000020656 #27	SYT5 (ENSMMSG00000020710) #28	DNAAF3 (ENSMMSG00000020852) #29	TNNI3 (ENSMMSG00000021559) #30	TNNT1 (ENSMMSG00000021627) #31	PPP1R12C (ENSMMSG00000021725) #32	EPS8L1 (ENSMMSG00000021799) #33	RDH13 (ENSMMSG00000021919) #34	ENSMMSG00000021955 #35	NLRP2 (ENSMMSG00000022022) #36	NLRP2B (ENSMMSG00000022088)
Camelidae	ANCESTRAL SPECIES	48	ENSGT00940000163198	ENSGT00940000167929	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609.a #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Arabian camel	MODERN SPECIES	35	ENSCDRG00005008877	ENSCDRG00005008564	SBK2 (ENSCDRG00005008543) #9	SSC5D (ENSCDRG00005008360) #10	C19orf85 (ENSCDRG00005008315) #13	ZNF628 (ENSCDRG00005008256) #12	ISOC2 (ENSCDRG00005008116) #14	SHISA7 (ENSCDRG00005008017)	UBE2S (ENSCDRG00005007952) #15	ENSCDRG00005007899 ##16	TMEM190 (ENSCDRG00005007703) #17	IL11 (ENSCDRG00005007629) #18	ENSCDRG00005007569 #19	COX6B2 (ENSCDRG00005007530) #20	KMT5C (ENSCDRG00005007496) #21	TMEM150B (ENSCDRG00005007465) #22	BRSK1 (ENSCDRG00005007267) #23	ENSCDRG00005007221 #24	PPP6R1 (ENSCDRG00005006681) #25	TMEM86B (ENSCDRG00005006605) #26	ENSCDRG00005006566 #27	SYT5 (ENSCDRG00005006518) #28	DNAAF3 (ENSCDRG00005006414) #29	TNNI3 (ENSCDRG00005006205) #30	ENSCDRG00005006066 #31	PPP1R12C (ENSCDRG00005006009) #32	EPS8L1 (ENSCDRG00005005952) #33	RDH13 (ENSCDRG00005005919) #34	ENSCDRG00005005870 #35	ENSCDRG00005005858 #36	NLRP2B (ENSCDRG00005005854)
Alpaca	MODERN SPECIES	443																TMEM150B (ENSVPAG00000002126) #22
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Carnivora	ANCESTRAL SPECIES	2	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Felidae	ANCESTRAL SPECIES	27	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Panthera	ANCESTRAL SPECIES	36	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
Panthera_a	ANCESTRAL SPECIES	44	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
leopard	MODERN SPECIES	215	ZNF579 (ENSPPRG00000018704) #7	SBK3 (ENSPPRG00000013386) #8	SBK2 (ENSPPRG00000013342) #9	SSC5D (ENSPPRG00000013277) #10	NAT14 (ENSPPRG00000013216) #11	C19orf85 (ENSPPRG00000013190) #13	ISOC2 (ENSPPRG00000013143) #14	SHISA7 (ENSPPRG00000013070)	UBE2S (ENSPPRG00000012998) #15	ENSPPRG00000012962 ##16	TMEM238 (ENSPPRG00000018690)	TMEM190 (ENSPPRG00000012832) #17	IL11 (ENSPPRG00000012809) #18	COX6B2 (ENSPPRG00000012676) #20	KMT5C (ENSPPRG00000012356) #21	TMEM150B (ENSPPRG00000012295) #22	ENSPPRG00000012287 #23	ENSPPRG00000012271 #23	HSPBP1 (ENSPPRG00000012261) #24	PPP6R1 (ENSPPRG00000012228) #25	TMEM86B (ENSPPRG00000011724) #26	PTPRH (ENSPPRG00000011709) #27	SYT5 (ENSPPRG00000011601) #28	DNAAF3 (ENSPPRG00000011261) #29	TNNI3 (ENSPPRG00000011129) #30	TNNT1 (ENSPPRG00000010965) #31	PPP1R12C (ENSPPRG00000010180) #32	EPS8L1 (ENSPPRG00000010027) #33	RDH13 (ENSPPRG00000009514) #34	ENSPPRG00000009420 #35	NLRP2B (ENSPPRG00000018543)
lion	MODERN SPECIES	243			ENSPLOG00000018868	ZNF628 (ENSPLOG00000018897) #12	C19orf85 (ENSPLOG00000018934) #13	ISOC2 (ENSPLOG00000018964) #14	SHISA7 (ENSPLOG00000019015)	UBE2S (ENSPLOG00000019058) #15	ENSPLOG00000019104 ##16	TMEM238 (ENSPLOG00000019156)	TMEM190 (ENSPLOG00000019166) #17	IL11 (ENSPLOG00000019267) #18	ENSPLOG00000019333 #19	COX6B2 (ENSPLOG00000019386) #20	KMT5C (ENSPLOG00000019426) #21	TMEM150B (ENSPLOG00000019498) #22	BRSK1 (ENSPLOG00000019542) #23	HSPBP1 (ENSPLOG00000019858) #24	PPP6R1 (ENSPLOG00000019899) #25	TMEM86B (ENSPLOG00000019952) #26	ENSPLOG00000019990 #27	SYT5 (ENSPLOG00000020078) #28	DNAAF3 (ENSPLOG00000020149) #29	TNNI3 (ENSPLOG00000020177) #30	TNNT1 (ENSPLOG00000020273) #31	PPP1R12C (ENSPLOG00000020371) #32	EPS8L1 (ENSPLOG00000020589) #33	RDH13 (ENSPLOG00000020781) #34	ENSPLOG00000020838 #35	ENSPLOG00000020869 #35	ENSPLOG00000020950 #36
Tiger	MODERN SPECIES	144	NLRP13 (ENSPTIG00000018517)	NLRP4 (ENSPTIG00000019793)	NLRP9 (ENSPTIG00000020208)	ENSPTIG00000020412	EPN1 (ENSPTIG00000020742)	U2AF2 (ENSPTIG00000005489)	CCDC106 (ENSPTIG00000006781)	ZNF581 (ENSPTIG00000003918)	ZNF784 (ENSPTIG00000008401)	SBK3 (ENSPTIG00000009172) #8	ISOC2 (ENSPTIG00000009431) #14	UBE2S (ENSPTIG00000010509) #15	ENSPTIG00000011191 #16	TMEM190 (ENSPTIG00000011833) #17	IL11 (ENSPTIG00000011968) #18	TMEM150B (ENSPTIG00000012613) #22
Cat	MODERN SPECIES	246	SSC5D (ENSFCAG00000019051) #10	NAT14 (ENSFCAG00000028853) #11	ZNF628 (ENSFCAG00000029227) #12	C19orf85 (ENSFCAG00000044694) #13	ISOC2 (ENSFCAG00000005643) #14	SHISA7 (ENSFCAG00000027090)	UBE2S (ENSFCAG00000005640) #15	ENSFCAG00000005639 ##16	TMEM238 (ENSFCAG00000042544)	TMEM190 (ENSFCAG00000044046) #17	IL11 (ENSFCAG00000005638) #18	ENSFCAG00000052345	ENSFCAG00000005637 #19	COX6B2 (ENSFCAG00000045733) #20	KMT5C (ENSFCAG00000029015) #21	TMEM150B (ENSFCAG00000005635) #22	BRSK1 (ENSFCAG00000005630) #23	ENSFCAG00000042114	HSPBP1 (ENSFCAG00000026896) #24	PPP6R1 (ENSFCAG00000005633) #25	PTPRH (ENSFCAG00000005631) #27	SYT5 (ENSFCAG00000005629) #28	DNAAF3 (ENSFCAG00000005628) #29	TNNT1 (ENSFCAG00000002054) #31	PPP1R12C (ENSFCAG00000005626) #32	EPS8L1 (ENSFCAG00000025509) #33	RDH13 (ENSFCAG00000005625) #34	ENSFCAG00000051498 #35	ENSFCAG00000029640 #35	ENSFCAG00000047912 #36	NLRP2B (ENSFCAG00000045443)
Caniformia	ANCESTRAL SPECIES	1	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Canidae	ANCESTRAL SPECIES	57	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000167523
Dingo	MODERN SPECIES	125	SBK2 (ENSCAFG00020015478) #9	SSC5D (ENSCAFG00020015482) #10	NAT14 (ENSCAFG00020015486) #11	ZNF628 (ENSCAFG00020015487) #12	C19orf85 (ENSCAFG00020015488) #13	ISOC2 (ENSCAFG00020015490) #14	SHISA7 (ENSCAFG00020015491)	UBE2S (ENSCAFG00020015492) #15	ENSCAFG00020015496 ##16	TMEM238 (ENSCAFG00020015498)	TMEM190 (ENSCAFG00020015500) #17	ENSCAFG00020015501	ENSCAFG00020015502 #19	COX6B2 (ENSCAFG00020015503) #20	KMT5C (ENSCAFG00020015504) #21	TMEM150B (ENSCAFG00020015506) #22	BRSK1 (ENSCAFG00020015549) #23	HSPBP1 (ENSCAFG00020016123) #24	PPP6R1 (ENSCAFG00020016151) #25	TMEM86B (ENSCAFG00020016672) #26	ENSCAFG00020016679 #27	SYT5 (ENSCAFG00020016689) #28	DNAAF3 (ENSCAFG00020016711) #29	TNNI3 (ENSCAFG00020016744) #30	TNNT1 (ENSCAFG00020016771) #31	PPP1R12C (ENSCAFG00020016801) #32	EPS8L1 (ENSCAFG00020016823) #33	RDH13 (ENSCAFG00020016856) #34	ENSCAFG00020016869 #35	ENSCAFG00020016875 #36	ENSCAFG00020016886 ##36
Dog	MODERN SPECIES		SSC5D (ENSCAFG00845000712) #10	NAT14 (ENSCAFG00845000780) #11	ZNF628 (ENSCAFG00845000792) #12	C19orf85 (ENSCAFG00845000804) #13	ISOC2 (ENSCAFG00845000836) #14	SHISA7 (ENSCAFG00845000868)	UBE2S (ENSCAFG00845000896) #15	RPL28 (ENSCAFG00845000924) ##16	TMEM238 (ENSCAFG00845000936)	TMEM190 (ENSCAFG00845000949) #17	IL11 (ENSCAFG00845000969) #18	PPP6R1 (ENSCAFG00845001030) #31	ENSCAFG00845001095 #19	COX6B2 (ENSCAFG00845001124) #20	KMT5C (ENSCAFG00845001159) #21	TMEM150B (ENSCAFG00845001187) #22	BRSK1 (ENSCAFG00845001216) #23	HSPBP1 (ENSCAFG00845001263) #24	PPP6R1 (ENSCAFG00845001308) #25	TMEM86B (ENSCAFG00845001370) #26	PTPRH (ENSCAFG00845001446) #27	SYT5 (ENSCAFG00845001583) #28	DNAAF3 (ENSCAFG00845001634) #29	PPP1R12C (ENSCAFG00845001670) #32	EPS8L1 (ENSCAFG00845001717) #33	RDH13 (ENSCAFG00845001782) #34	GP6 (ENSCAFG00845001852) #35	ENSCAFG00845001905 #36	ENSCAFG00845001924	ENSCAFG00845001942 ##36	NCR1 (ENSCAFG00845002000) ##35
Red fox	MODERN SPECIES	206	ZNF579 (ENSVVUG00000007015) #7	SBK3 (ENSVVUG00000007018)	SBK2 (ENSVVUG00000007022) #9	SSC5D (ENSVVUG00000007024) #10	NAT14 (ENSVVUG00000007037) #11	C19orf85 (ENSVVUG00000007047) #13	ISOC2 (ENSVVUG00000007056) #14	ENSVVUG00000007072	UBE2S (ENSVVUG00000007076) #15	ENSVVUG00000007114 #16	TMEM238 (ENSVVUG00000007119)	TMEM190 (ENSVVUG00000007128) #17	FAM71E2 (ENSVVUG00000007149) #19	COX6B2 (ENSVVUG00000007159) #20	KMT5C (ENSVVUG00000007162) #21	TMEM150B (ENSVVUG00000007167) #22	BRSK1 (ENSVVUG00000007177) #23	HSPBP1 (ENSVVUG00000007191) #24	PPP6R1 (ENSVVUG00000007196) #25	TMEM86B (ENSVVUG00000007220) #26	ENSVVUG00000007237 #27	SYT5 (ENSVVUG00000007244) #28	ENSVVUG00000007253	DNAAF3 (ENSVVUG00000007279) #29	TNNT1 (ENSVVUG00000007306) #31	PPP1R12C (ENSVVUG00000007376) #32	EPS8L1 (ENSVVUG00000007397) #33	RDH13 (ENSVVUG00000007525) #34	ENSVVUG00000007551 #35	ENSVVUG00000007628 #36	ENSVVUG00000007675 ##36
Caniformia_b	ANCESTRAL SPECIES	34	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT00940000161714.a ##36
Mustelinae	ANCESTRAL SPECIES	72	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00910000148545	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34
American mink	MODERN SPECIES	314	SBK2 (ENSNVIG00000012408) #9	SSC5D (ENSNVIG00000012394) #10	NAT14 (ENSNVIG00000012388) #11	C19orf85 (ENSNVIG00000012365) #13	ISOC2 (ENSNVIG00000012346) #14	SHISA7 (ENSNVIG00000012333)	UBE2S (ENSNVIG00000012321) #15	ENSNVIG00000012309 ##16	TMEM238 (ENSNVIG00000012306)	TMEM190 (ENSNVIG00000012296) #17	IL11 (ENSNVIG00000012289) #18	ENSNVIG00000012284	ENSNVIG00000012265 #19	COX6B2 (ENSNVIG00000012246) #20	KMT5C (ENSNVIG00000012195) #21	TMEM150B (ENSNVIG00000012168) #22	BRSK1 (ENSNVIG00000012084) #23	HSPBP1 (ENSNVIG00000012048) #24	PPP6R1 (ENSNVIG00000011989) #25	TMEM86B (ENSNVIG00000011976) #26	ENSNVIG00000011965 #27	SYT5 (ENSNVIG00000011894) #28	E3W9A1 (ENSNVIG00000011858) #29	TNNI3 (ENSNVIG00000011828) #30	TNNT1 (ENSNVIG00000011684) #31	PPP1R12C (ENSNVIG00000011659) #32	EPS8L1 (ENSNVIG00000011588) #33	RDH13 (ENSNVIG00000011551) #34
Ferret	MODERN SPECIES	399	SSC5D (ENSMPUG00000007330) #10	SBK3 (ENSMPUG00000007347) #8	SBK2 (ENSMPUG00000007362) #9	NAT14 (ENSMPUG00000007371) #11	ZNF628 (ENSMPUG00000020191) #12	ISOC2 (ENSMPUG00000007377) #14	ENSMPUG00000020192	SHISA7 (ENSMPUG00000007436)	UBE2S (ENSMPUG00000007446) #15	RPL28 (ENSMPUG00000007450) ##16	TMEM190 (ENSMPUG00000007491) #17	IL11 (ENSMPUG00000007506) #18	ENSMPUG00000007525 #19	COX6B2 (ENSMPUG00000007546) #20	KMT5C (ENSMPUG00000007564) #21	TMEM150B (ENSMPUG00000007570) #22	BRSK1 (ENSMPUG00000007627) #23	HSPBP1 (ENSMPUG00000007645) #24	PPP6R1 (ENSMPUG00000007655) #25	TMEM86B (ENSMPUG00000007670) #26	ENSMPUG00000007675 #27	SYT5 (ENSMPUG00000007704) #28	DNAAF3 (ENSMPUG00000007713) #29	TNNI3 (ENSMPUG00000007721) #30	TNNT1 (ENSMPUG00000007780) #31	PPP1R12C (ENSMPUG00000007895) #32	ENSMPUG00000020193	EPS8L1 (ENSMPUG00000008071) #33	RDH13 (ENSMPUG00000008089) #34	ENSMPUG00000008096	ENSMPUG00000008099
Ursidae	ANCESTRAL SPECIES	41	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609.d #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Giant Panda	MODERN SPECIES	3	ZNF524 (ENSAMEG00000018908)	ENSAMEG00000025197	ZNF579 (ENSAMEG00000029881) #7	SBK2 (ENSAMEG00000003850) #9	ENSAMEG00000025298 #19	SSC5D (ENSAMEG00000003815) #10	NAT14 (ENSAMEG00000003814) #11	ZNF628 (ENSAMEG00000030388) #12	C19orf85 (ENSAMEG00000028820) #13	SHISA7 (ENSAMEG00000003785)	UBE2S (ENSAMEG00000003779) #15	RPL28 (ENSAMEG00000003764) ##16	TMEM190 (ENSAMEG00000023632) #17	ENSAMEG00000003756 #18	KMT5C (ENSAMEG00000029225) #21	TMEM150B (ENSAMEG00000003711) #22	BRSK1 (ENSAMEG00000003572) #23	HSPBP1 (ENSAMEG00000003688) #24	PPP6R1 (ENSAMEG00000003612) #25	TMEM86B (ENSAMEG00000003566) #26	ENSAMEG00000003549 #27	SYT5 (ENSAMEG00000003521) #28	DNAAF3 (ENSAMEG00000003504) #29	TNNI3 (ENSAMEG00000003486) #30	TNNT1 (ENSAMEG00000003417) #31	PPP1R12C (ENSAMEG00000003363) #32	EPS8L1 (ENSAMEG00000003333) #33	RDH13 (ENSAMEG00000003306) #34	ENSAMEG00000003297 #35	ENSAMEG00000025515 ##36	ENSAMEG00000028151 ##36
Ursus	ANCESTRAL SPECIES	123	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.d ##16	ENSGT00390000008732.a.b #16	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609.d #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.a ##36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
American black bear	MODERN SPECIES	336										ENSUAMG00000017635 #16	TMEM190 (ENSUAMG00000017636) #17	IL11 (ENSUAMG00000017637) #18	ENSUAMG00000017639	COX6B2 (ENSUAMG00000017641) #20	KMT5C (ENSUAMG00000017643) #21	TMEM150B (ENSUAMG00000017647) #22	BRSK1 (ENSUAMG00000017649) #23	HSPBP1 (ENSUAMG00000017653) #24	PPP6R1 (ENSUAMG00000017654) #25	TMEM86B (ENSUAMG00000017655) #26	ENSUAMG00000017656 #27	SYT5 (ENSUAMG00000017657) #28	DNAAF3 (ENSUAMG00000017658) #29	TNNI3 (ENSUAMG00000017659) #30	TNNT1 (ENSUAMG00000017661) #31	PPP1R12C (ENSUAMG00000017663) #32	EPS8L1 (ENSUAMG00000017665) #33	RDH13 (ENSUAMG00000017666) #34	ENSUAMG00000017670 #35	ENSUAMG00000017671 ##36	NCR1 (ENSUAMG00000017674) ##35
Polar bear	MODERN SPECIES	349	ZNF524 (ENSUMAG00000024591)	ENSUMAG00000024592	SBK2 (ENSUMAG00000024593) #9	SSC5D (ENSUMAG00000024594) #10	ENSUMAG00000024602	NAT14 (ENSUMAG00000024620) #11	C19orf85 (ENSUMAG00000024623) #13	ISOC2 (ENSUMAG00000024626) #14	UBE2S (ENSUMAG00000024628) #15	ENSUMAG00000024630 ##16	TMEM190 (ENSUMAG00000024632) #17	IL11 (ENSUMAG00000024634) #18	ENSUMAG00000024636 #19	ENSUMAG00000024638	ENSUMAG00000024640	TMEM150B (ENSUMAG00000024643) #22	BRSK1 (ENSUMAG00000024648) #23	HSPBP1 (ENSUMAG00000024654) #24	PPP6R1 (ENSUMAG00000024655) #25	TMEM86B (ENSUMAG00000024656) #26	ENSUMAG00000024658 #27	SYT5 (ENSUMAG00000024659) #28	ENSUMAG00000024662 #29	TNNI3 (ENSUMAG00000024663) #30	TNNT1 (ENSUMAG00000024664) #31	PPP1R12C (ENSUMAG00000024671) #32	ENSUMAG00000024677 #33	RDH13 (ENSUMAG00000024678) #34	ENSUMAG00000024680 #35	ENSUMAG00000024681 ##36	NCR1 (ENSUMAG00000024684) ##35
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.b ##35
Chiroptera	ANCESTRAL SPECIES	45	ENSGT00930000151080 #7	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.b ##35
Megabat	MODERN SPECIES	1693				SBK2 (ENSPVAG00000007335) #9	SSC5D (ENSPVAG00000007331) #10	NAT14 (ENSPVAG00000007329) #11	ISOC2 (ENSPVAG00000007325) #14	SHISA7 (ENSPVAG00000007322)	UBE2S (ENSPVAG00000007320) #15	RPL28 (ENSPVAG00000007315) ##16	TMEM190 (ENSPVAG00000007313) #17	IL11 (ENSPVAG00000007308) #18	ENSPVAG00000007307 #19	COX6B2 (ENSPVAG00000007306) #20	KMT5C (ENSPVAG00000007305) #21	TMEM150B (ENSPVAG00000007304) #22	BRSK1 (ENSPVAG00000007303) #23	HSPBP1 (ENSPVAG00000007302) #24	PPP6R1 (ENSPVAG00000007301) #25	TMEM86B (ENSPVAG00000007300) #26	ENSPVAG00000007299 #27	SYT5 (ENSPVAG00000007297) #28	DNAAF3 (ENSPVAG00000007296) #29	TNNI3 (ENSPVAG00000007294) #30	TNNT1 (ENSPVAG00000007292) #31	PPP1R12C (ENSPVAG00000007289) #32	EPS8L1 (ENSPVAG00000007287) #33	RDH13 (ENSPVAG00000007285) #34
Microchiroptera	ANCESTRAL SPECIES	44	ENSGT00930000151080 #7	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.c.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.b ##35
Microbat	MODERN SPECIES	2299																ENSMLUG00000003278 #22	BRSK1 (ENSMLUG00000003247) #23	HSPBP1 (ENSMLUG00000005036) #24
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010019197	SBK2 (ENSRFEG00010019172) #9	SSC5D (ENSRFEG00010018958) #10	NAT14 (ENSRFEG00010018920) #11	ENSRFEG00010018887 #13	ISOC2 (ENSRFEG00010018788) #14	SHISA7 (ENSRFEG00010018732)	UBE2S (ENSRFEG00010018685) #15	ENSRFEG00010018653 ##16	TMEM238 (ENSRFEG00010018633)	TMEM190 (ENSRFEG00010018584) #17	IL11 (ENSRFEG00010018500) #18	GARIN5B (ENSRFEG00010018399) #19	COX6B2 (ENSRFEG00010018344) #20	KMT5C (ENSRFEG00010018293) #21	ENSRFEG00010018253 #22	BRSK1 (ENSRFEG00010017988) #23	HSPBP1 (ENSRFEG00010017938) #24	PPP6R1 (ENSRFEG00010017867) #25	TMEM86B (ENSRFEG00010017826) #26	PTPRH (ENSRFEG00010017321) #27	SYT5 (ENSRFEG00010017140) #28	DNAAF3 (ENSRFEG00010016317) #29	TNNI3 (ENSRFEG00010016024) #30	TNNT1 (ENSRFEG00010015784) #31	PPP1R12C (ENSRFEG00010015728) #32	EPS8L1 (ENSRFEG00010015399) #33	ENSRFEG00010015343	RDH13 (ENSRFEG00010015233) #34	ENSRFEG00010015159 #35	NLRP2 (ENSRFEG00010014517) #36
Equus	ANCESTRAL SPECIES	1	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00940000169278	ENSGT00390000008732.a.a.d ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714.b #36	ENSGT01100000263478.b.a.b.b.a.a.b.f.a.b ##35
Donkey	MODERN SPECIES	18	SBK3 (ENSEASG00005020736) #8	SBK2 (ENSEASG00005020735) #9	SSC5D (ENSEASG00005020746) #10	NAT14 (ENSEASG00005020757) #11	C19orf85 (ENSEASG00005020761) #13	ENSEASG00005020763 #14	SHISA7 (ENSEASG00005020767)	UBE2S (ENSEASG00005036906) #15	TMEM238 (ENSEASG00005028140)	RPL28 (ENSEASG00005035483) ##16	TMEM190 (ENSEASG00005020784) #17	IL11 (ENSEASG00005020788) #18	GARIN5B (ENSEASG00005036909) #19	ENSEASG00005020794 #20	KMT5C (ENSEASG00005020797) #21	TMEM150B (ENSEASG00005020800) #22	BRSK1 (ENSEASG00005020845) #23	HSPBP1 (ENSEASG00005020921) #24	PPP6R1 (ENSEASG00005020928) #25	TMEM86B (ENSEASG00005027183) #26	PTPRH (ENSEASG00005020951) #27	SYT5 (ENSEASG00005020964) #28	DNAAF3 (ENSEASG00005020976) #29	TNNI3 (ENSEASG00005026389) #30	TNNT1 (ENSEASG00005020996) #31	PPP1R12C (ENSEASG00005021028) #32	EPS8L1 (ENSEASG00005021072) #33	RDH13 (ENSEASG00005021074) #34	ENSEASG00005021077 #35	NLRP2 (ENSEASG00005038452) #36	ENSEASG00005032310 ##35
Horse	MODERN SPECIES	1	ZNF579 (ENSECAG00000020219) #7	SBK3 (ENSECAG00000019786) #8	SBK2 (ENSECAG00000019196) #9	SSC5D (ENSECAG00000019043) #10	NAT14 (ENSECAG00000018711)	ENSECAG00000031021	C19orf85 (ENSECAG00000029672) #13	ISOC2 (ENSECAG00000015928) #14	SHISA7 (ENSECAG00000015918)	ENSECAG00000044515	RPL28 (ENSECAG00000026938) ##16	TMEM190 (ENSECAG00000037361) #17	IL11 (ENSECAG00000014511) #18	GARIN5B (ENSECAG00000014099) #19	KMT5C (ENSECAG00000013820) #21	TMEM150B (ENSECAG00000013225) #22	BRSK1 (ENSECAG00000001444) #23	HSPBP1 (ENSECAG00000058656) #24	PPP6R1 (ENSECAG00000015843) #25	TMEM86B (ENSECAG00000040978) #26	PTPRH (ENSECAG00000009454) #27	SYT5 (ENSECAG00000003943) #28	TNNI3 (ENSECAG00000017232) #30	TNNT1 (ENSECAG00000015657) #31	PPP1R12C (ENSECAG00000001869) #32	EPS8L1 (ENSECAG00000000532) #33	RDH13 (ENSECAG00000023146) #34	GP6 (ENSECAG00000022569) #35	NLRP2 (ENSECAG00000020087) #36	ENSECAG00000042978 ##35	ENSECAG00000051897 ##35
Atlantogenata	ANCESTRAL SPECIES	73	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714 #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Afrotheria	ANCESTRAL SPECIES	52	ENSGT00940000162820	ENSGT00530000064557	ENSGT00940000153306.B	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714 #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Afrotheria_a	ANCESTRAL SPECIES	80	ENSGT00940000162820	ENSGT00530000064557	ENSGT00940000153306.B	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.a ##16	ENSGT00390000007165 #18	ENSGT00940000163150 #19	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227 #27	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000159641 #34	ENSGT01100000263478.b.a.b.a #35	ENSGT00940000161714 #36	ENSGT01100000263478.b.a.b.b.a.a.a.b ##35
Hyrax	MODERN SPECIES	4394																TMEM150B (ENSPCAG00000007320) #22	BRSK1 (ENSPCAG00000007204) #23
Tenrec	MODERN SPECIES	15848																ENSETEG00000001517 #22
Marsupialia	ANCESTRAL SPECIES	50	ENSGT00940000162227 #27	ENSGT00390000007101.d.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000169278	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23
Marsupialia_b	ANCESTRAL SPECIES	36	ENSGT00940000162227 #27	ENSGT00390000007101.d.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000169278	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00910000144307 #12	ENSGT00950000182932.A.b.b #11	ENSGT00940000162592 #10	ENSGT00940000161663 #9	ENSGT00930000151080 #7	ENSGT00940000153306.B	ENSGT00940000163198	ENSGT00530000064557	ENSGT00940000163086	ENSGT00940000163608	ENSGT00390000013183	ENSGT00940000155556.d	ENSGT00940000160411
Diprotodontia	ANCESTRAL SPECIES	88	ENSGT00940000162227 #27	ENSGT00390000007101.d.a.i.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000162319.d	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23
Diprotodontia_a	ANCESTRAL SPECIES	75	ENSGT00390000002069 #29	ENSGT00940000162227 #27	ENSGT00390000007101.d.a.i.a #26	ENSGT00390000009899.a.c #25	ENSGT00940000153909.a #24	ENSGT00850000133583 #13	ENSGT00390000006753.A #14	ENSGT00940000162254	ENSGT00940000157149 #15	ENSGT00390000008732.a.b #16	ENSGT00940000162720.b.b	ENSGT00390000006710 #17	ENSGT00390000007165 #18	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00910000144307 #12	ENSGT00950000182932.A.b.b #11	ENSGT00940000162592 #10	ENSGT00940000161663 #9	ENSGT00930000151080 #7	ENSGT00940000153306.B	ENSGT00940000163198	ENSGT00530000064557	ENSGT00940000163086	ENSGT00940000163608	ENSGT00390000013183	ENSGT00940000155556.d	ENSGT00940000160411
Common wonbat	MODERN SPECIES	917	TNNI3 (ENSVURG00010003694) #30	DNAAF3 (ENSVURG00010003686) #29	ENSVURG00010003674 #26	ENSVURG00010003554 #25	HSPBP1 (ENSVURG00010003530) #24	ENSVURG00010003526 #13	ISOC2 (ENSVURG00010003516) #14	SHISA7 (ENSVURG00010003504)	UBE2S (ENSVURG00010003492) #15	ENSVURG00010003445 ##16	TMEM238 (ENSVURG00010003437)	ENSVURG00010003430 #17	IL11 (ENSVURG00010003414) #18	COX6B2 (ENSVURG00010003407) #20	KMT5C (ENSVURG00010003386) #21	TMEM150B (ENSVURG00010003375) #22	BRSK1 (ENSVURG00010003317) #23	ZNF628 (ENSVURG00010003306) #12	NAT14 (ENSVURG00010003295) #11	ENSVURG00010003263 #10	SBK2 (ENSVURG00010003245) #9	ENSVURG00010003232 #7	FIZ1 (ENSVURG00010003229)	ZNF524 (ENSVURG00010003224)	ENSVURG00010003221	CCDC106 (ENSVURG00010003172)	U2AF2 (ENSVURG00010003154)	EPN1 (ENSVURG00010003130)	NLRP12 (ENSVURG00010003116)	ENSVURG00010003110	ENSVURG00010003094
koala	MODERN SPECIES	100	TNNT1 (ENSPCIG00000013224) #31	ENSPCIG00000013219 #29	ENSPCIG00000013218 #27	ENSPCIG00000037300 #26	PPP6R1 (ENSPCIG00000013215) #25	HSPBP1 (ENSPCIG00000013214) #24	ENSPCIG00000032778 #13	ENSPCIG00000013128 #14	SHISA7 (ENSPCIG00000013122)	UBE2S (ENSPCIG00000013120) #15	ENSPCIG00000034796 #16	TMEM238 (ENSPCIG00000013116)	IL11 (ENSPCIG00000013115) #18	ENSPCIG00000013081 #20	KMT5C (ENSPCIG00000013079) #21	TMEM150B (ENSPCIG00000013078) #22	ENSPCIG00000034685	ENSPCIG00000013077 #23	ZNF628 (ENSPCIG00000013076) #12	NAT14 (ENSPCIG00000013075) #11	ENSPCIG00000033533 #10	ENSPCIG00000007800	SBK2 (ENSPCIG00000007798) #9	ZNF579 (ENSPCIG00000018025) #7	FIZ1 (ENSPCIG00000018024)	ENSPCIG00000018023	ZNF865 (ENSPCIG00000018022)	ENSPCIG00000018021	ENSPCIG00000018019	CCDC106 (ENSPCIG00000018016)	U2AF2 (ENSPCIG00000018013)
Wallaby	MODERN SPECIES	6505														COX6B2 (ENSMEUG00000011107) #20	KMT5C (ENSMEUG00000011084) #21	ENSMEUG00000011074 #22	BRSK1 (ENSMEUG00000011056) #23
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000002632	ENSSHAG00000024323	ENSSHAG00000000366 #35	ENSSHAG00000031067	ENSSHAG00000002420 #34	ENSSHAG00000032103 #32	ENSSHAG00000022075 #30	DNAAF3 (ENSSHAG00000001262) #29	ENSSHAG00000030335 #26	PPP6R1 (ENSSHAG00000003824) #25	ENSSHAG00000021195 #24	ENSSHAG00000029320	ENSSHAG00000029811	ENSSHAG00000030806 #18	ENSSHAG00000021140	ENSSHAG00000006109 #22	ENSSHAG00000024461 #11	ENSSHAG00000021430 #12	ENSSHAG00000024482 #10	SBK2 (ENSSHAG00000022715) #9	ZNF865 (ENSSHAG00000030225)	ENSSHAG00000029457	CCDC106 (ENSSHAG00000030913)	ENSSHAG00000029638	ENSSHAG00000021448	ENSSHAG00000000957	ENSSHAG00000003722	ENSSHAG00000026615	ENSSHAG00000029652	ENSSHAG00000005208	ENSSHAG00000005498
Opossum	MODERN SPECIES	136																TMEM150B (ENSMODG00000003216) #22
Platypus	MODERN SPECIES	1	ENSOANG00000038725 #12	NAPSA (ENSOANG00000012522)	KCNC3 (ENSOANG00000042618)	MYH14 (ENSOANG00000041913)	ENSOANG00000046588 #13	IL11 (ENSOANG00000050537) #18	TMEM238 (ENSOANG00000039695)	ISOC2 (ENSOANG00000051012) #14	SHISA7 (ENSOANG00000046477)	UBE2S (ENSOANG00000044720) #15	ENSOANG00000039013 #30	RPL28 (ENSOANG00000019798) ##16	ENSOANG00000049484	ENSOANG00000039267	KMT5C (ENSOANG00000047699) #21	ENSOANG00000048286 #22	BRSK1 (ENSOANG00000039586) #23	HSPBP1 (ENSOANG00000044632) #24	PPP6R1 (ENSOANG00000003135) #25	ENSOANG00000029783	DNAAF3 (ENSOANG00000028284) #29	TNNT1 (ENSOANG00000013442) #31	PPP1R12C (ENSOANG00000045477) #32	EPS8L1 (ENSOANG00000045903) #33	CDC42EP5 (ENSOANG00000038060)	ENSOANG00000048434	LENG8 (ENSOANG00000009123)	TTYH1 (ENSOANG00000009124)	RPS9 (ENSOANG00000045770)	ENSOANG00000014747	MBOAT7 (ENSOANG00000007113)
Sauria	ANCESTRAL SPECIES	46	ENSGT00940000160074	ENSGT01060000248591.b	ENSGT00940000153560.b.a.b	ENSGT00940000154244.B	ENSGT00550000074829	ENSGT00940000159620.b.a	ENSGT00950000183060.a.b.b.b	ENSGT00390000008006	ENSGT00390000010577	ENSGT00940000162969	ENSGT00940000158125 #33	ENSGT00940000161425 #32	ENSGT00940000160609 #31	ENSGT00390000001450.g	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946
Lepidosauria	ANCESTRAL SPECIES	75															ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000154244.B	ENSGT00940000153560.b.a.b	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT01100000263562.a	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.d
Toxicofera	ANCESTRAL SPECIES	13	ENSGT00940000153560.b.a.b	ENSGT00940000161095	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT01100000263562.a	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.j #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.d
Elapidae	ANCESTRAL SPECIES	16	ENSGT00940000153560.b.a.b	ENSGT00940000161095	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.b	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.j #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.d	ENSGT00390000010799.y
Indian cobra	MODERN SPECIES	337	ENSNNAG00000004820	ENSNNAG00000004697	CYTH2 (ENSNNAG00000004648)	KCNJ14 (ENSNNAG00000004616)	TNNT1 (ENSNNAG00000004596) #31	PPP1R12C (ENSNNAG00000004565) #32	ENSNNAG00000004407 #33	CDC42EP5 (ENSNNAG00000004364)	LENG9 (ENSNNAG00000004339)	ENSNNAG00000004281	ENSNNAG00000004242	ENSNNAG00000004224	ENSNNAG00000004187	ENSNNAG00000004170	KMT5C (ENSNNAG00000004154) #21	TMEM150B (ENSNNAG00000004116) #22	BRSK1 (ENSNNAG00000003861) #23	HSPBP1 (ENSNNAG00000003806) #24	PPP6R1 (ENSNNAG00000003751) #25	TMEM86B (ENSNNAG00000003695) #26	SYT5 (ENSNNAG00000003624) #28	TNNI3 (ENSNNAG00000012753) #30	ENSNNAG00000012725	BCAT2 (ENSNNAG00000012698)	HSD17B14 (ENSNNAG00000012604)	ENSNNAG00000012501	DHDH (ENSNNAG00000012266)	ENSNNAG00000012197	SLC17A7 (ENSNNAG00000012026)	ENSNNAG00000011986	ENSNNAG00000011851
Elapidae_a	ANCESTRAL SPECIES	22	ENSGT00940000153560.b.a.b	ENSGT00940000161095	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.b	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.j #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.d	ENSGT00390000010799.y
Blue-lipped sea krait	MODERN SPECIES	410																ENSLLTG00000000457 #22	ENSLLTG00000000482
Acanthophiinae	ANCESTRAL SPECIES	25	ENSGT00940000153560.b.a.b	ENSGT00940000161095	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.b	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.j #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.d	ENSGT00390000010799.y
Mainland tiger snake	MODERN SPECIES	91	ENSNSUG00000003850	ENSNSUG00000003863	CYTH2 (ENSNSUG00000004111)	KCNJ14 (ENSNSUG00000004135)	ENSNSUG00000004144	TNNT1 (ENSNSUG00000004148) #31	ENSNSUG00000004150 #32	ENSNSUG00000004153 #33	CDC42EP5 (ENSNSUG00000004167)	ENSNSUG00000004169	LENG8 (ENSNSUG00000004171)	ENSNSUG00000004174	ENSNSUG00000004179	ENSNSUG00000004181	KMT5C (ENSNSUG00000004186) #21	TMEM150B (ENSNSUG00000004191) #22	ENSNSUG00000004194 #23	HSPBP1 (ENSNSUG00000004219) #24	PPP6R1 (ENSNSUG00000004229) #25	TMEM86B (ENSNSUG00000004240) #26	ENSNSUG00000004242	SYT5 (ENSNSUG00000004244) #28	DNAAF3 (ENSNSUG00000004251) #29	TNNI3 (ENSNSUG00000004285) #30	ENSNSUG00000004297	BCAT2 (ENSNSUG00000004347)	ENSNSUG00000005838	ENSNSUG00000005841	NUCB1 (ENSNSUG00000005842)	TULP2 (ENSNSUG00000005843)	ENSNSUG00000005844
Eastern brown snake	MODERN SPECIES	53	ENSPTXG00000011628	ENSPTXG00000011476	CYTH2 (ENSPTXG00000011463)	KCNJ14 (ENSPTXG00000011458)	ENSPTXG00000011456	ENSPTXG00000011449 #31	PPP1R12C (ENSPTXG00000011445) #32	ENSPTXG00000011442 #33	ENSPTXG00000011441 #33	CDC42EP5 (ENSPTXG00000011439)	LENG9 (ENSPTXG00000011438)	LENG8 (ENSPTXG00000011435)	ENSPTXG00000011434	ENSPTXG00000011433	KMT5C (ENSPTXG00000015630) #21	TMEM150B (ENSPTXG00000015627) #22	ENSPTXG00000015619 #23	HSPBP1 (ENSPTXG00000015615) #24	PPP6R1 (ENSPTXG00000015605) #25	TMEM86B (ENSPTXG00000015597) #26	SYT5 (ENSPTXG00000015596) #28	DNAAF3 (ENSPTXG00000015595) #29	TNNI3 (ENSPTXG00000015594) #30	ENSPTXG00000015593	BCAT2 (ENSPTXG00000015592)	ENSPTXG00000015591	ENSPTXG00000015589	NUCB1 (ENSPTXG00000015587)	ENSPTXG00000015584	DHDH (ENSPTXG00000015582)	ENSPTXG00000015578
Lizard	MODERN SPECIES	943	ENSACAG00000016777	ENSACAG00000016780 #31	ENSACAG00000040516	ENSACAG00000036729	ENSACAG00000016847 #32	ENSACAG00000016875 #33	ENSACAG00000021929	LENG9 (ENSACAG00000016906)	LENG8 (ENSACAG00000016911)	TTYH1 (ENSACAG00000016932)	ENSACAG00000040442	ENSACAG00000016968	ENSACAG00000043262	ENSACAG00000022270	KMT5C (ENSACAG00000016974) #21	ENSACAG00000028696 #22	BRSK1 (ENSACAG00000016990) #23
Laterata	ANCESTRAL SPECIES	34	ENSGT00940000153560.b.a.b	ENSGT00940000161095	ENSGT01060000248591.b	ENSGT00940000160074	ENSGT01030000234586.B.a.b	ENSGT01100000263562.a	ENSGT00390000001450.g	ENSGT00940000160609 #31	ENSGT00940000161425 #32	ENSGT00940000158125 #33	ENSGT00940000162969	ENSGT00390000010577	ENSGT00390000008006	ENSGT00950000183060.a.b.b.a.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000165368	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908
Common wall lizard	MODERN SPECIES	4	ENSPMRG00000019513	ENSPMRG00000019503	ENSPMRG00000019497	ENSPMRG00000019495	ENSPMRG00000019491	ENSPMRG00000019466 #31	PPP1R12C (ENSPMRG00000019407) #32	EPS8L1 (ENSPMRG00000019353) #33	CDC42EP5 (ENSPMRG00000019342)	LENG9 (ENSPMRG00000019340)	LENG8 (ENSPMRG00000019330)	TTYH1 (ENSPMRG00000019249)	ENSPMRG00000018864	KMT5C (ENSPMRG00000018801) #21	ENSPMRG00000018797	TMEM150B (ENSPMRG00000018792) #22	BRSK1 (ENSPMRG00000018561) #23	HSPBP1 (ENSPMRG00000018514) #24	PPP6R1 (ENSPMRG00000018477) #25	TMEM86B (ENSPMRG00000018459) #26	ENSPMRG00000018425	SYT5 (ENSPMRG00000018357) #28	DNAAF3 (ENSPMRG00000018337) #29	TNNI3 (ENSPMRG00000018325) #30	FGF21 (ENSPMRG00000018317)	BCAT2 (ENSPMRG00000018304)	HSD17B14 (ENSPMRG00000018298)	ENSPMRG00000018285	ENSPMRG00000018281	NUCB1 (ENSPMRG00000018271)	TULP2 (ENSPMRG00000018214)
Argentine black and white tegu	MODERN SPECIES	38	ENSSMRG00000003713	ENSSMRG00000003717	TNNT1 (ENSSMRG00000003720) #31	PPP1R12C (ENSSMRG00000003739) #32	EPS8L1 (ENSSMRG00000003752) #33	CDC42EP5 (ENSSMRG00000003775)	LENG9 (ENSSMRG00000003781)	LENG8 (ENSSMRG00000003783)	TTYH1 (ENSSMRG00000003795)	ENSSMRG00000003804	ENSSMRG00000003810	ENSSMRG00000003952	ENSSMRG00000003956	ENSSMRG00000003961	KMT5C (ENSSMRG00000003969) #21	TMEM150B (ENSSMRG00000003972) #22	BRSK1 (ENSSMRG00000003978) #23	HSPBP1 (ENSSMRG00000003992) #24	PPP6R1 (ENSSMRG00000004002) #25	TMEM86B (ENSSMRG00000004023) #26	ENSSMRG00000004026	SYT5 (ENSSMRG00000004036) #28	DNAAF3 (ENSSMRG00000004049) #29	TNNI3 (ENSSMRG00000004055) #30	ENSSMRG00000004066	BCAT2 (ENSSMRG00000004068)	HSD17B14 (ENSSMRG00000004074)	ENSSMRG00000004083	ENSSMRG00000004118	NUCB1 (ENSSMRG00000004119)	ENSSMRG00000004122
Archelosauria	ANCESTRAL SPECIES	36	ENSGT00940000160074	ENSGT01060000248591.b	ENSGT00940000153560.b.a.b	ENSGT00940000154244.B	ENSGT00550000074829	ENSGT00940000159620.b.a	ENSGT00950000183060.a.b.b.b	ENSGT00390000008006	ENSGT00390000010577	ENSGT00940000162969	ENSGT00940000158125 #33	ENSGT00940000161425 #32	ENSGT00940000160609 #31	ENSGT00390000001450.g	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908
Cryptodira	ANCESTRAL SPECIES	40	ENSGT01060000248591.b	ENSGT00940000153560.b.a.b	ENSGT00940000154244.B	ENSGT00550000074829	ENSGT00940000159620.b.a	ENSGT00950000183060.a.b.b.b	ENSGT00390000008006	ENSGT00390000010577	ENSGT00940000162969	ENSGT00940000158125.e #33	ENSGT00940000158125.f #33	ENSGT00940000161425 #32	ENSGT00940000160609 #31	ENSGT00390000001450.g	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908
Testudinoidea	ANCESTRAL SPECIES	35	ENSGT01060000248591.b	ENSGT00940000153560.b.a.b	ENSGT00940000154244.B	ENSGT00550000074829	ENSGT00940000159620.b.a	ENSGT00950000183060.a.b.b.b	ENSGT00390000008006	ENSGT00390000010577	ENSGT00940000162969	ENSGT00940000158125.e #33	ENSGT00940000158125.f #33	ENSGT00940000161425 #32	ENSGT00940000160609 #31	ENSGT00390000001450.g.h.b	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00390000001450.g.h.a.a.a.a.b	ENSGT00390000001450.g.h.a.a.a.b.a	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000161121	ENSGT00940000154404.a
Testudinidae	ANCESTRAL SPECIES	47														ENSGT00390000001450.g.g.a	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816 #28	ENSGT00390000002069 #29	ENSGT01030000234588.b.b.b.b.b #30	ENSGT00390000001450.g.h.a.a.a.a.b	ENSGT00390000001450.g.h.a.a.a.b.a	ENSGT00940000161866	ENSGT00390000009532.A.d.b	ENSGT00940000161346	ENSGT00940000154404.a	ENSGT00390000001927.b	ENSGT00940000161908	ENSGT00390000007946.f
Goode s thornscrub tortoise	MODERN SPECIES	138	ENSGEVG00005014121	ENSGEVG00005014310	TTYH1 (ENSGEVG00005014345)	LENG8 (ENSGEVG00005014428)	LENG9 (ENSGEVG00005014475)	ENSGEVG00005014493	ENSGEVG00005014548 #33	ENSGEVG00005014789 #33	PPP1R12C (ENSGEVG00005014836) #32	TNNT1 (ENSGEVG00005014885) #31	ENSGEVG00005015012	ENSGEVG00005015049	ENSGEVG00005015084	ENSGEVG00005015127	KMT5C (ENSGEVG00005015166) #21	TMEM150B (ENSGEVG00005015189) #22	ENSGEVG00005015289	HSPBP1 (ENSGEVG00005015610) #24	PPP6R1 (ENSGEVG00005015635) #25	TMEM86B (ENSGEVG00005015752) #26	ENSGEVG00005015794	SYT5 (ENSGEVG00005015820) #28	DNAAF3 (ENSGEVG00005015900) #29	TNNI3 (ENSGEVG00005016040) #30	ENSGEVG00005016088	ENSGEVG00005016140	ENSGEVG00005016187	ENSGEVG00005016210	BCAT2 (ENSGEVG00005016261)	HSD17B14 (ENSGEVG00005016294)	ENSGEVG00005016325
Anura	ANCESTRAL SPECIES	352														ENSGT00390000001450.f	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25
Frog	MODERN SPECIES	7	gprc5cl2 (ENSXETG00000004596)	lmtk3 (ENSXETG00000004595)	ENSXETG00000039255	ENSXETG00000004593	tlr13 (ENSXETG00000004577)	ENSXETG00000004592	ENSXETG00000042820	cyth1 (ENSXETG00000004590)	kcnj14 (ENSXETG00000004575)	plekha4 (ENSXETG00000004571)	bcat2 (ENSXETG00000025501)	hsd17b14 (ENSXETG00000035086)	ENSXETG00000038914	fut1 (ENSXETG00000042151)	kmt5c (ENSXETG00000031687) #21	tmem150b (ENSXETG00000025504) #22	prl.2 (ENSXETG00000003400)	ENSXETG00000040677	ppp6r1 (ENSXETG00000022927) #25	hspbp1 (ENSXETG00000022926) #24	ENSXETG00000042468	brsk1 (ENSXETG00000022924) #23	tmem86a (ENSXETG00000031883) ##26	ptprh (ENSXETG00000022920)	snrnp70 (ENSXETG00000022919)	kcna7 (ENSXETG00000022916)	kif18b (ENSXETG00000021253)	ntf4 (ENSXETG00000049443)	ruvbl2 (ENSXETG00000025105)	h2bc14 (ENSXETG00000021249)	ENSXETG00000042416
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000014250	LMTK3 (ENSLLEG00000014127)	ENSLLEG00000013958	ENSLLEG00000013878	ENSLLEG00000013569	ENSLLEG00000013194	ENSLLEG00000013150	KCNJ14 (ENSLLEG00000013122)	ENSLLEG00000012012	ENSLLEG00000011759	HSD17B14 (ENSLLEG00000011697)	BCAT2 (ENSLLEG00000011616)	ENSLLEG00000011576	ENSLLEG00000011558	KMT5C (ENSLLEG00000011497) #21	TMEM150B (ENSLLEG00000011417) #22	ENSLLEG00000011381	ENSLLEG00000011177	HSPBP1 (ENSLLEG00000011041) #24	PPP6R1 (ENSLLEG00000010593) #25	ENSLLEG00000010529 ##26	ENSLLEG00000010502	ENSLLEG00000008806	ENSLLEG00000008683	CNOT3 (ENSLLEG00000008453)	PRPF31 (ENSLLEG00000029631)	TFPT (ENSLLEG00000029613)	ENSLLEG00000029594	ENSLLEG00000029502 #33	ENSLLEG00000029478	PPP1R12C (ENSLLEG00000029435) #32
Coelacanth	MODERN SPECIES	430	C14orf119 (ENSLACG00000015778)	ACIN1 (ENSLACG00000015560)	ENSLACG00000015456	C14orf93 (ENSLACG00000015300)	psmb5 (ENSLACG00000015194)	ENSLACG00000015163	ENSLACG00000015147	CDH24 (ENSLACG00000014676)	AP1G2 (ENSLACG00000013220)	MYH6 (ENSLACG00000012789)	MYH7 (ENSLACG00000012187)	PRMT5 (ENSLACG00000011043)	ENSLACG00000010809	ENSLACG00000010344	KMT5C (ENSLACG00000009701) #21	ENSLACG00000022497 #22	BRSK1 (ENSLACG00000007911) #23	ENSLACG00000005299	TNNT1 (ENSLACG00000003616) #31	PPP1R12C (ENSLACG00000001582) #32	ENSLACG00000022214
Actinopterygii	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b #22
Neopterygii	ANCESTRAL SPECIES	166						ENSGT01050000244893.c.a.b	ENSGT00870000136549	ENSGT01070000253895	ENSGT00390000017606.a.a	ENSGT00950000182935.B.b.c	ENSGT00510000048276	ENSGT00390000008221	ENSGT00940000160396	ENSGT00940000179237	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000160024	ENSGT00940000157367	ENSGT00510000048963	ENSGT00510000048561	ENSGT00940000159653	ENSGT00940000153560.b.b.b	ENSGT00940000158756	ENSGT00920000149129	ENSGT00950000182979.a.a	ENSGT00940000163663.A	ENSGT00730000111100.a.a	ENSGT00950000182951.A.a.b	ENSGT00940000161265	ENSGT01060000248591.a.a.a.b	ENSGT00940000154405.a.a
Osteoglossocephalai	ANCESTRAL SPECIES	47	ENSGT00940000165011.a	ENSGT00940000155205	ENSGT00940000160265.g	ENSGT00390000017030.b.b	ENSGT00390000002667	ENSGT00940000156772.b.c.b.a	ENSGT01030000234599.a.a	ENSGT01050000244893.c.a.b	ENSGT00870000136549	ENSGT00950000182935.B.b.c	ENSGT00510000048276	ENSGT00390000008221.a	ENSGT00940000167614	ENSGT00940000179237	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000160024	ENSGT00940000157367.a.b	ENSGT00940000178227	ENSGT00940000153560.b.b.b.g	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265	ENSGT00950000182951.A.a.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00730000111100.a.b
Clupeocephala	ANCESTRAL SPECIES	5	ENSGT00950000183184.b.b	ENSGT00390000008221.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000160024	ENSGT00940000157367.a.b	ENSGT00940000178227.b	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265.f	ENSGT00950000182951.A.a.b.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738
Euteleosteomorpha	ANCESTRAL SPECIES		ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000158365.f.b	ENSGT00940000155497.a.a
Acanthomorphata	ANCESTRAL SPECIES	101	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT00940000167870	ENSGT01040000241311	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.b	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Euacanthomorphacea	ANCESTRAL SPECIES	5	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00940000169047	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.b	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Percomorphaceae	ANCESTRAL SPECIES	3	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00940000169047	ENSGT00800000125226	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Atherinomorphae	ANCESTRAL SPECIES	6	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	3	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Aplocheiloidei	ANCESTRAL SPECIES	30	ENSGT00940000155537	ENSGT00940000157972.c	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00940000177422	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a.n	ENSGT00930000151032.A.c.b
Mangrove rivulus	MODERN SPECIES	37	ap5z1 (ENSKMAG00000016203)	CARD11 (ENSKMAG00000016241)	chst12a (ENSKMAG00000016278)	C1QTNF6 (ENSKMAG00000016291)	ENSKMAG00000016305	ENSKMAG00000016317	mpst (ENSKMAG00000016335)	mpst (ENSKMAG00000016347)	mpst (ENSKMAG00000016365)	ENSKMAG00000016377	mief1 (ENSKMAG00000016398)	ENSKMAG00000016438	atf4b (ENSKMAG00000016459)	ENSKMAG00000016471	adsl (ENSKMAG00000016489)	tmem150b (ENSKMAG00000016528) #22	ENSKMAG00000016560	ENSKMAG00000016589	pvalb6 (ENSKMAG00000016614)	ENSKMAG00000016633	ENSKMAG00000016676	ENSKMAG00000016698	ENSKMAG00000016740	ENSKMAG00000016783	ENSKMAG00000016798	ENSKMAG00000016833	ENSKMAG00000016870	ENSKMAG00000016944	desi1a (ENSKMAG00000016956)	flii (ENSKMAG00000016988)	LLGL1 (ENSKMAG00000017091)
Turquoise killifish	MODERN SPECIES	1612	CHST12A (ENSNFUG00015002983)	C1QTNF6A (ENSNFUG00015002982)	ENSNFUG00015002980	ENSNFUG00015002975	UBE2I (ENSNFUG00015002972)	Nfu_g_1_019808 (ENSNFUG00015002970)	mpst (ENSNFUG00015002965)	BX470254.1 (ENSNFUG00015002962)	SMCR7A (ENSNFUG00015002956)	ENSNFUG00015002937	ZGC (ENSNFUG00015002927)	ATF4B2 (ENSNFUG00015002924)	CR812472.2 (ENSNFUG00015002913)	ENSNFUG00015002907	adsl (ENSNFUG00015002891)	tmem150b (ENSNFUG00015002875) #22	ENSNFUG00015002859	pvalb6 (ENSNFUG00015002775)	ENSNFUG00015002743	CR790377.1 (ENSNFUG00015002733)	ENSNFUG00015002707	ENSNFUG00015002678	ENSNFUG00015002671	ENSNFUG00015002669	drg2 (ENSNFUG00015002657)	GFER (ENSNFUG00015002650)	SYNGR3A (ENSNFUG00015002646)	znf598 (ENSNFUG00015002639)	ENSNFUG00015002635	slc25a17 (ENSNFUG00015002630)	rpusd1 (ENSNFUG00015002627)
Cyprinodontoidei	ANCESTRAL SPECIES	23	ENSGT00940000153203.B	ENSGT00940000157061.a	ENSGT00940000159900	ENSGT00940000160999	ENSGT00940000156736.c.a	ENSGT00940000159322	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b #22	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000153203.B	ENSGT00940000157061.a	ENSGT00940000159900	ENSGT00940000160999	ENSGT00940000156736.c.a	ENSGT00940000159322	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b #22	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810
Poecilia	ANCESTRAL SPECIES	43	ENSGT00940000153203.B	ENSGT00940000157061.a	ENSGT00940000159900	ENSGT00940000160999	ENSGT00940000156736.c.a	ENSGT00940000159322	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b #22	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00390000006124	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810	ENSGT00940000158869
NAME_6	ANCESTRAL SPECIES	181											ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b #22	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177669	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000157465	ENSGT01050000244840.A.b.a	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810
Amazon molly	MODERN SPECIES	972												DGKQ (ENSPFOG00000016841)	NFKB1 (ENSPFOG00000016918)	ENSPFOG00000016996	polr2b (ENSPFOG00000017023)	ENSPFOG00000022935 #22	igfbp7 (ENSPFOG00000024178)	COX18 (ENSPFOG00000017100)	selenot2 (ENSPFOG00000017114)	ENSPFOG00000017123	sqstm1 (ENSPFOG00000017129)
Sailfin molly	MODERN SPECIES	985											DGKQ (ENSPLAG00000023980)	NFKB1 (ENSPLAG00000023981)	ENSPLAG00000023982	ENSPLAG00000023983	polr2b (ENSPLAG00000023984)	ENSPLAG00000023985 #22	igfbp7 (ENSPLAG00000023986)	COX18 (ENSPLAG00000023987)	selenot2 (ENSPLAG00000023988)	ENSPLAG00000023989	ENSPLAG00000023990	ENSPLAG00000023991	TBC1D9B (ENSPLAG00000023992)	rnf130 (ENSPLAG00000023993)	F2RL3 (ENSPLAG00000023994)	rest (ENSPLAG00000023995)	b4galt1l (ENSPLAG00000023996)	exosc3 (ENSPLAG00000023997)	tgfbi (ENSPLAG00000023998)
Guppy	MODERN SPECIES	440	HNRNPA0 (ENSPREG00000010619)	maea (ENSPREG00000010640)	zgc:136929 (ENSPREG00000010695)	spon2b (ENSPREG00000010719)	ENSPREG00000010729	fgfrl1a (ENSPREG00000010756)	slit3 (ENSPREG00000010790)	ENSPREG00000010874	canx (ENSPREG00000010905)	mgat4b (ENSPREG00000010989)	DGKQ (ENSPREG00000011022)	NFKB1 (ENSPREG00000011064)	ENSPREG00000011101	ENSPREG00000011137	polr2b (ENSPREG00000011157)	ENSPREG00000011233 #22	igfbp7 (ENSPREG00000011250)	COX18 (ENSPREG00000011262)	selenot2 (ENSPREG00000011276)	ENSPREG00000011294	sqstm1 (ENSPREG00000011325)	ENSPREG00000011336	ENSPREG00000011355	ENSPREG00000011385	TBC1D9B (ENSPREG00000011401)	rnf130 (ENSPREG00000011424)	F2RL3 (ENSPREG00000011440)	rest (ENSPREG00000011445)	b4galt1l (ENSPREG00000011461)	exosc3 (ENSPREG00000011472)	tgfbi (ENSPREG00000011486)
Platyfish	MODERN SPECIES	15	ENSXMAG00000026825	ENSXMAG00000022117	fgfrl1a (ENSXMAG00000027004)	ENSXMAG00000021616	slit3 (ENSXMAG00000015981)	LTC4S (ENSXMAG00000016063)	MAML1 (ENSXMAG00000024495)	canx (ENSXMAG00000016067)	ENSXMAG00000028503	mgat4b (ENSXMAG00000015489)	DGKQ (ENSXMAG00000015446)	NFKB1 (ENSXMAG00000015369)	ENSXMAG00000015357	ENSXMAG00000025993	polr2b (ENSXMAG00000015282)	ENSXMAG00000015279 #22	F2RL3 (ENSXMAG00000015278)	rnf130 (ENSXMAG00000015265)	ENSXMAG00000015180	ENSXMAG00000023813	ENSXMAG00000025855	ENSXMAG00000027941	rnf4 (ENSXMAG00000015165)	selenot2 (ENSXMAG00000015160)	COX18 (ENSXMAG00000015150)	igfbp7 (ENSXMAG00000015141)	ENSXMAG00000021279	ENSXMAG00000029965	rest (ENSXMAG00000015136)	b4galt1l (ENSXMAG00000021612)	exosc3 (ENSXMAG00000015111)
NAME_4	ANCESTRAL SPECIES	120	ENSGT00940000153203.B	ENSGT00940000157061.a	ENSGT00940000159900	ENSGT00940000160999	ENSGT00940000156736.c.a	ENSGT00940000159322	ENSGT00940000160738	ENSGT00950000183201.b.b.b.a	ENSGT00950000182915.a.a.a	ENSGT00940000156526.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000234799	ENSGT00950000183132.C	ENSGT01030000234578.A.b.b #22	ENSGT00530000063555.A.a.a	ENSGT00530000063506.A	ENSGT00390000011725.c	ENSGT00390000010318	ENSGT00390000002781	ENSGT00940000177214	ENSGT00940000158554	ENSGT00940000167197	ENSGT00940000157465	ENSGT01050000244840.A.b.a	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00530000063860.a	ENSGT00940000164810
Sheepshead minnow	DUPLICATION
Sheepshead minnow	MODERN SPECIES	171																ENSCVAG00000004645 #22	igfbp7 (ENSCVAG00000004660)	COX18 (ENSCVAG00000004685)	selenot2 (ENSCVAG00000004703)	ENSCVAG00000004717	sqstm1 (ENSCVAG00000004740)	ENSCVAG00000000141	TBC1D9B (ENSCVAG00000004880)	rnf130 (ENSCVAG00000004894)	F2RL3 (ENSCVAG00000004899)	rest (ENSCVAG00000004912)	b4galt1l (ENSCVAG00000004938)	exosc3 (ENSCVAG00000004942)	tgfbi (ENSCVAG00000004988)	ENSCVAG00000005014	ENSCVAG00000005072
Sheepshead minnow	MODERN SPECIES	196	zgc:136929 (ENSCVAG00000008256)	spon2b (ENSCVAG00000008186)	ENSCVAG00000008173	fgfrl1a (ENSCVAG00000008166)	slit3 (ENSCVAG00000000223)	ENSCVAG00000008016	LTC4S (ENSCVAG00000008009)	MAML1 (ENSCVAG00000007997)	canx (ENSCVAG00000007944)	mgat4b (ENSCVAG00000007902)	DGKQ (ENSCVAG00000007796)	NFKB1 (ENSCVAG00000007771)	ENSCVAG00000000209	ENSCVAG00000007685	polr2b (ENSCVAG00000007676)	ENSCVAG00000007612 #22
Oryzias	ANCESTRAL SPECIES		ENSGT00940000157972.c	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b.sb	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Oryzias_a	ANCESTRAL SPECIES	20	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b.sb	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Japanese Medaka HdrR	MODERN SPECIES	22	chst12a (ENSORLG00000013533)	ENSORLG00000029259	C1QTNF6 (ENSORLG00000010706)	il2rb (ENSORLG00000013522)	ENSORLG00000013514	mpst (ENSORLG00000013490)	mpst (ENSORLG00000029872)	ENSORLG00000027830	ENSORLG00000022248	mief1 (ENSORLG00000013478)	ENSORLG00000013465	ENSORLG00000013428	atf4b (ENSORLG00000013424)	ENSORLG00000013414	adsl (ENSORLG00000027286)	tmem150b (ENSORLG00000025419) #22	ENSORLG00000013411	ENSORLG00000013406	pvalb6 (ENSORLG00000013396)	ENSORLG00000013372	ENSORLG00000013333	ENSORLG00000024128	ENSORLG00000013307	ENSORLG00000025567	ENSORLG00000013294	CCDC97 (ENSORLG00000013285)	ENSORLG00000028930	ENSORLG00000023148	ENSORLG00000013273	ENSORLG00000027282	ENSORLG00000013253
Chinese medaka	MODERN SPECIES	907	smurf1 (ENSOSIG00000008452)	wipi2 (ENSOSIG00000008296)	ENSOSIG00000008285	CARD11 (ENSOSIG00000008236)	chst12a (ENSOSIG00000008232)	C1QTNF6 (ENSOSIG00000008231)	ENSOSIG00000008230	ube2ib (ENSOSIG00000008229)	ENSOSIG00000008228	ENSOSIG00000008227	mief1 (ENSOSIG00000008226)	ENSOSIG00000008225	ENSOSIG00000008224	atf4b (ENSOSIG00000008223)	ENSOSIG00000008222	tmem150b (ENSOSIG00000008024) #22	ENSOSIG00000008022	ENSOSIG00000008019	pvalb6 (ENSOSIG00000008018)	ENSOSIG00000008015	ENSOSIG00000008014	ENSOSIG00000008008	ENSOSIG00000008004
Oryzias_b	ANCESTRAL SPECIES	30	ENSGT00940000158573	ENSGT00940000156614.b.sb	ENSGT00940000160396	ENSGT00940000177422	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a.e	ENSGT00510000046773.a.b.c.a.f	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	9	C1QTNF6 (ENSOMEG00000004726)	ENSOMEG00000004707	ENSOMEG00000004671	mpst (ENSOMEG00000004645)	ENSOMEG00000004607	mpst (ENSOMEG00000004526)	ENSOMEG00000004519	mief1 (ENSOMEG00000004506)	ENSOMEG00000004495	ENSOMEG00000004477	ENSOMEG00000004437	atf4b (ENSOMEG00000022555)	ENSOMEG00000022547	adsl (ENSOMEG00000022529)	tmem150b (ENSOMEG00000000594) #22	tmem150b (ENSOMEG00000022485) #22	ENSOMEG00000022463	ENSOMEG00000022407	pvalb6 (ENSOMEG00000022377)	ENSOMEG00000022341	ENSOMEG00000022291	ENSOMEG00000022273	ENSOMEG00000022240	ENSOMEG00000022179	ENSOMEG00000022122	ENSOMEG00000022051	ENSOMEG00000022015	desi1a (ENSOMEG00000022006)	flii (ENSOMEG00000021963)	LLGL1 (ENSOMEG00000021788)	ENSOMEG00000021686
Indian medaka	MODERN SPECIES	9	chst12a (ENSOMEG00000004762)	C1QTNF6 (ENSOMEG00000004726)	ENSOMEG00000004707	ENSOMEG00000004671	mpst (ENSOMEG00000004645)	ENSOMEG00000004607	mpst (ENSOMEG00000004526)	ENSOMEG00000004519	mief1 (ENSOMEG00000004506)	ENSOMEG00000004495	ENSOMEG00000004477	ENSOMEG00000004437	atf4b (ENSOMEG00000022555)	ENSOMEG00000022547	adsl (ENSOMEG00000022529)	tmem150b (ENSOMEG00000000594) #22	tmem150b (ENSOMEG00000022485) #22	ENSOMEG00000022463	ENSOMEG00000022407	pvalb6 (ENSOMEG00000022377)	ENSOMEG00000022341	ENSOMEG00000022291	ENSOMEG00000022273	ENSOMEG00000022240	ENSOMEG00000022179	ENSOMEG00000022122	ENSOMEG00000022051	ENSOMEG00000022015	desi1a (ENSOMEG00000022006)	flii (ENSOMEG00000021963)	LLGL1 (ENSOMEG00000021788)
Javanese ricefish	MODERN SPECIES	22	ENSOJAG00000015832	ENSOJAG00000015843	mpst (ENSOJAG00000015869)	mpst (ENSOJAG00000015874)	ENSOJAG00000015880	ENSOJAG00000015889	mief1 (ENSOJAG00000015895)	ENSOJAG00000015915	ENSOJAG00000015937	ENSOJAG00000015954	mief1 (ENSOJAG00000016041)	ENSOJAG00000016098	mief1 (ENSOJAG00000016119)	atf4b (ENSOJAG00000016140)	ENSOJAG00000016159	tmem150b (ENSOJAG00000016353) #22	ENSOJAG00000016361	pvalb6 (ENSOJAG00000016411)	ENSOJAG00000016435	ENSOJAG00000016450	ENSOJAG00000016457	ENSOJAG00000016650	ENSOJAG00000016700	ENSOJAG00000016708	ENSOJAG00000016726	ENSOJAG00000016783	ENSOJAG00000016795	desi1a (ENSOJAG00000016807)	ENSOJAG00000000069	drg2 (ENSOJAG00000000396)	gfer (ENSOJAG00000000523)
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Cichlidae	ANCESTRAL SPECIES	19	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C.m.a	ENSGT00950000183122.C.m.b	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	27	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C.m.a	ENSGT00950000183122.C.m.b	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Haplochromini	ANCESTRAL SPECIES	54	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789.n	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C.m.a	ENSGT00950000183122.C.m.b	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Burton s mouthbrooder	MODERN SPECIES	953															adsl (ENSHBUG00000022483)	tmem150b (ENSHBUG00000022440) #22	ENSHBUG00000022381	ENSHBUG00000022340	pvalb6 (ENSHBUG00000022327)	ENSHBUG00000022312	ENSHBUG00000022305	ENSHBUG00000022257
Haplochromini_A	ANCESTRAL SPECIES	37	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789.n	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C.m.a	ENSGT00950000183122.C.m.b	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Haplochromini_B	ANCESTRAL SPECIES	41	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789.n	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C.m.a.a.a	ENSGT00940000179111.a	ENSGT00950000183122.C.m.b.b	ENSGT00950000183122.C.m.b.a	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Eastern happy	MODERN SPECIES	16	ENSACLG00000011503	ENSACLG00000011507	ENSACLG00000011509	mief1 (ENSACLG00000011513)	ENSACLG00000011532	ENSACLG00000011537	atf4b (ENSACLG00000011542)	ENSACLG00000011545	ENSACLG00000011548	ENSACLG00000011560	adsl (ENSACLG00000011567)	ENSACLG00000011592	adsl (ENSACLG00000011596)	ENSACLG00000011630	adsl (ENSACLG00000011659)	tmem150b (ENSACLG00000011676) #22	ENSACLG00000011688	ENSACLG00000011706	pvalb6 (ENSACLG00000011742)	ENSACLG00000011763	ENSACLG00000011790	ENSACLG00000011805	ENSACLG00000011873	ENSACLG00000011913	ENSACLG00000011921	CCDC97 (ENSACLG00000011932)	ENSACLG00000012025	ENSACLG00000012044	desi1a (ENSACLG00000012066)	flii (ENSACLG00000012145)	LLGL1 (ENSACLG00000012263)
Zebra mbuna	MODERN SPECIES	1107	il2rb (ENSMZEG00005006969)	ENSMZEG00005006940	mpst (ENSMZEG00005006933)	ENSMZEG00005006924	mief1 (ENSMZEG00005006902)	ENSMZEG00005006869	ENSMZEG00005006854	atf4b (ENSMZEG00005006842)	ENSMZEG00005006816	adsl (ENSMZEG00005006647)	ENSMZEG00005006623	adsl (ENSMZEG00005006589)	adsl (ENSMZEG00005006556)	adsl (ENSMZEG00005006522)	adsl (ENSMZEG00005006493)	tmem150b (ENSMZEG00005006469) #22	ENSMZEG00005006453	ENSMZEG00005006439	pvalb6 (ENSMZEG00005006425)	ENSMZEG00005006411	ENSMZEG00005006389	ENSMZEG00005006378	ENSMZEG00005006362	ENSMZEG00005006351	CCDC97 (ENSMZEG00005006316)	ENSMZEG00005006274	ENSMZEG00005006254	desi1a (ENSMZEG00005006231)	flii (ENSMZEG00005006146)	LLGL1 (ENSMZEG00005006068)	ENSMZEG00005006043
P. nyererei	MODERN SPECIES	559														ENSPNYG00000018567	adsl (ENSPNYG00000018664)	tmem150b (ENSPNYG00000018774) #22	ENSPNYG00000018827	ENSPNYG00000018881	pvalb6 (ENSPNYG00000018900)	ENSPNYG00000018964	ENSPNYG00000019151	ENSPNYG00000019184	CCDC97 (ENSPNYG00000019217)	ENSPNYG00000019235	ENSPNYG00000019252	ENSPNYG00000019272	desi1a (ENSPNYG00000019287)	flii (ENSPNYG00000019329)	LLGL1 (ENSPNYG00000019449)	MYO15A (ENSPNYG00000019542)	drg2 (ENSPNYG00000019667)
Lyretail cichlid	MODERN SPECIES	344	ap5z1 (ENSNBRG00000004932)	CARD11 (ENSNBRG00000005011)	chst12a (ENSNBRG00000005067)	C1QTNF6 (ENSNBRG00000005077)	ENSNBRG00000005091	mpst (ENSNBRG00000005135)	ENSNBRG00000005143	ENSNBRG00000005158	mief1 (ENSNBRG00000005168)	ENSNBRG00000005190	ENSNBRG00000005223	atf4b (ENSNBRG00000005230)	ENSNBRG00000005236	adsl (ENSNBRG00000005264)	ENSNBRG00000005376	tmem150b (ENSNBRG00000005396) #22	ENSNBRG00000005429	ENSNBRG00000005475	pvalb6 (ENSNBRG00000005523)	ENSNBRG00000005543	ENSNBRG00000005569	ENSNBRG00000005616	ENSNBRG00000005664	CCDC97 (ENSNBRG00000005673)	ENSNBRG00000005688	ENSNBRG00000005747	ENSNBRG00000005757	desi1a (ENSNBRG00000005777)	flii (ENSNBRG00000005821)	LLGL1 (ENSNBRG00000005932)	ENSNBRG00000006019
Nile tilapia	MODERN SPECIES	16	mpst (ENSONIG00000008540)	ENSONIG00000043232	ENSONIG00000031382	ENSONIG00000042044	mief1 (ENSONIG00000008541)	ENSONIG00000008542	ENSONIG00000008550	atf4b (ENSONIG00000034760)	ENSONIG00000029635	ENSONIG00000008553	ENSONIG00000027910	adsl (ENSONIG00000008556)	adsl (ENSONIG00000036192)	ENSONIG00000038907	adsl (ENSONIG00000008560)	tmem150b (ENSONIG00000008567) #22	ENSONIG00000008569	ENSONIG00000008571	pvalb6 (ENSONIG00000008574)	ENSONIG00000036623	ENSONIG00000008577	ENSONIG00000035980	ENSONIG00000008578	ENSONIG00000008580	ENSONIG00000031397	ENSONIG00000039770	ENSONIG00000032010	ENSONIG00000032491	ENSONIG00000020752	ENSONIG00000038698	ENSONIG00000042627
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00970000196672	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00970000196672	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00940000167870	ENSGT01040000241311	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00970000196672	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00940000167870	ENSGT01040000241311	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Eupecaria_C	ANCESTRAL SPECIES	17	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00970000196672	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Gilthead seabream	MODERN SPECIES	15	ap5z1 (ENSSAUG00010016205)	ENSSAUG00010016310	chst12a (ENSSAUG00010016330)	ENSSAUG00010016332	ENSSAUG00010016333	ENSSAUG00010016334	mpst (ENSSAUG00010016339)	ENSSAUG00010016340	ENSSAUG00010016342	mief1 (ENSSAUG00010016343)	ENSSAUG00010016344	ENSSAUG00010016351	atf4b (ENSSAUG00010016353)	ENSSAUG00010016355	adsl (ENSSAUG00010016361)	tmem150b (ENSSAUG00010016495) #22	ENSSAUG00010016496	ENSSAUG00010016497	pvalb6 (ENSSAUG00010016499)	ENSSAUG00010016502	ENSSAUG00010016503	ENSSAUG00010016512	ENSSAUG00010016874	ENSSAUG00010016887	ENSSAUG00010016889	ENSSAUG00010016893	ENSSAUG00010016895	desi1a (ENSSAUG00010016899)	flii (ENSSAUG00010016900)	LLGL1 (ENSSAUG00010016928)	ENSSAUG00010018873
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	35	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00970000196672	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
European seabass	MODERN SPECIES	21	ap5z1 (ENSDLAG00005005205)	ENSDLAG00005005025	ENSDLAG00005005000	il2rb (ENSDLAG00005031516)	ENSDLAG00005004936	mpst (ENSDLAG00005004928)	ENSDLAG00005004924	ENSDLAG00005028464	ENSDLAG00005029048	mief1 (ENSDLAG00005004893)	ENSDLAG00005004808	ENSDLAG00005004784	atf4b (ENSDLAG00005026933)	ENSDLAG00005032142	adsl (ENSDLAG00005031872)	tmem150b (ENSDLAG00005004733) #22	ENSDLAG00005004694	ENSDLAG00005004644	pvalb6 (ENSDLAG00005004622)	ENSDLAG00005033261	ENSDLAG00005004418	ENSDLAG00005004318	ENSDLAG00005026436	ENSDLAG00005035083	ENSDLAG00005004288	ENSDLAG00005004198	ENSDLAG00005033123	ENSDLAG00005027415	FLII (ENSDLAG00005003732)	LLGL1 (ENSDLAG00005002223)	MYO15A (ENSDLAG00005002142)
Large yellow croaker	MODERN SPECIES	483	CARD11 (ENSLCRG00005008474)	chst12a (ENSLCRG00005008473)	C1QTNF6 (ENSLCRG00005008472)	il2rb (ENSLCRG00005008470)	ENSLCRG00005008466	mpst (ENSLCRG00005008463)	TST (ENSLCRG00005008462)	ENSLCRG00005008461	ENSLCRG00005008459	mief1 (ENSLCRG00005008458)	ENSLCRG00005008453	ENSLCRG00005008450	atf4b (ENSLCRG00005008448)	ENSLCRG00005008447	adsl (ENSLCRG00005007463)	tmem150b (ENSLCRG00005007457) #22	ENSLCRG00005007455	ENSLCRG00005007450	pvalb6 (ENSLCRG00005007448)	ENSLCRG00005007443	ENSLCRG00005007440	ENSLCRG00005007429	ENSLCRG00005007415	ENSLCRG00005007379	ENSLCRG00005007376	ENSLCRG00005007371	ENSLCRG00005007365	desi1a (ENSLCRG00005007362)	flii (ENSLCRG00005006602)	LLGL1 (ENSLCRG00005004456)	MYO15A (ENSLCRG00005004381)
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00990000209944	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Perciformes_a	ANCESTRAL SPECIES	1	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00990000209944	ENSGT00940000178559	ENSGT00970000196672	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Channel bull blenny	MODERN SPECIES	22	CARD11 (ENSCGOG00000001917)	chst12a (ENSCGOG00000001904)	ENSCGOG00000001903	il2rb (ENSCGOG00000001900)	ube2ib (ENSCGOG00000001819)	mpst (ENSCGOG00000001816)	TST (ENSCGOG00000001809)	ENSCGOG00000001803	ENSCGOG00000001802	mief1 (ENSCGOG00000001788)	ENSCGOG00000001750	ENSCGOG00000001738	ENSCGOG00000001736	ENSCGOG00000001727	adsl (ENSCGOG00000001555)	tmem150b (ENSCGOG00000001547) #22	ENSCGOG00000001545	ENSCGOG00000001543	pvalb6 (ENSCGOG00000001542)	ENSCGOG00000001540	ENSCGOG00000001534	ENSCGOG00000001524	ENSCGOG00000001521	ENSCGOG00000001519	ENSCGOG00000001517	ENSCGOG00000001510	ENSCGOG00000001508	desi1a (ENSCGOG00000001506)	flii (ENSCGOG00000001293)	LLGL1 (ENSCGOG00000000884)	ENSCGOG00000000819
Pike perch	MODERN SPECIES	38	chst12a (ENSSLUG00000007909)	ENSSLUG00000007912	il2rb (ENSSLUG00000007917)	ube2ib (ENSSLUG00000007925)	mpst (ENSSLUG00000007940)	ENSSLUG00000007941	ENSSLUG00000007945	ENSSLUG00000007951	mief1 (ENSSLUG00000007958)	ENSSLUG00000007961	ENSSLUG00000007972	atf4b (ENSSLUG00000007978)	ENSSLUG00000007986	ENSSLUG00000007992	adsl (ENSSLUG00000008028)	tmem150b (ENSSLUG00000008199) #22	ENSSLUG00000008203	ENSSLUG00000008214	pvalb6 (ENSSLUG00000008231)	ENSSLUG00000008243	ENSSLUG00000008274	ENSSLUG00000008346	ENSSLUG00000008353	ENSSLUG00000008358	ENSSLUG00000008363	ENSSLUG00000008370	ENSSLUG00000008377	ENSSLUG00000008383	ENSSLUG00000008385	desi1a (ENSSLUG00000008387)	flii (ENSSLUG00000008405)
Cottioidei	ANCESTRAL SPECIES	1	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00990000209944	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00940000167870	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00940000169047	ENSGT00800000125226	ENSGT01100000263483.F.b.a.b	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000178257	ENSGT00940000163663.A.a
Stickleback	MODERN SPECIES	10	chst12a (ENSGACG00000007992)	ENSGACG00000008001	il2rb (ENSGACG00000008005)	ENSGACG00000008012	mpst (ENSGACG00000008039)	ENSGACG00000008053	ENSGACG00000008055	ENSGACG00000008059	ENSGACG00000008064	ENSGACG00000008069	mief1 (ENSGACG00000008071)	ENSGACG00000008090	ENSGACG00000008175	ENSGACG00000008177	adsl (ENSGACG00000008181)	tmem150b (ENSGACG00000008299) #22	ENSGACG00000008313	ENSGACG00000008326	pvalb6 (ENSGACG00000008329)	ENSGACG00000008346	ENSGACG00000008358	ENSGACG00000008362	ENSGACG00000008369	ENSGACG00000008371	ENSGACG00000008375	ENSGACG00000008377	ENSGACG00000008382	ENSGACG00000008388	CCDC97 (ENSGACG00000008389)	ENSGACG00000008394	desi1a (ENSGACG00000008409)
Lumpfish	MODERN SPECIES	23	ENSCLMG00005012297	chst12a (ENSCLMG00005012349)	ENSCLMG00005012350	il2rb (ENSCLMG00005012351)	ube2ib (ENSCLMG00005012352)	mpst (ENSCLMG00005012354)	ENSCLMG00005012355	ENSCLMG00005012356	ENSCLMG00005012357	ENSCLMG00005012359	ENSCLMG00005012360	ENSCLMG00005012372	ENSCLMG00005012373	ENSCLMG00005012374	adsl (ENSCLMG00005012383)	tmem150b (ENSCLMG00005012621) #22	ENSCLMG00005012624	ENSCLMG00005012625	pvalb6 (ENSCLMG00005012626)	ENSCLMG00005012627	ENSCLMG00005012629	ENSCLMG00005012944	ENSCLMG00005012946	ENSCLMG00005012947	ENSCLMG00005012950	ENSCLMG00005012951	ENSCLMG00005012952	ENSCLMG00005012953	desi1a (ENSCLMG00005012955)	flii (ENSCLMG00005012960)	ENSCLMG00005012974
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643
Carangaria	ANCESTRAL SPECIES	4	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643
Pleuronectoidei	ANCESTRAL SPECIES	2	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00390000015495	ENSGT00940000178257	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b	ENSGT00940000155335.s.b
Tongue sole	MODERN SPECIES	8	CARD11 (ENSCSEG00000006194)	chst12a (ENSCSEG00000006200)	ENSCSEG00000006203	ENSCSEG00000006210	mpst (ENSCSEG00000006230)	ENSCSEG00000006232	mpst (ENSCSEG00000006250)	ENSCSEG00000006255	ENSCSEG00000006258	mief1 (ENSCSEG00000006260)	ENSCSEG00000006264	ENSCSEG00000006270	atf4b (ENSCSEG00000006272)	ENSCSEG00000006276	adsl (ENSCSEG00000006283)	tmem150b (ENSCSEG00000006300) #22	ENSCSEG00000006306	shmt1 (ENSCSEG00000006309)	pdap1b (ENSCSEG00000006316)	smcr8a (ENSCSEG00000006341)	bud31 (ENSCSEG00000006343)	TOP3A (ENSCSEG00000006356)	cbx7a (ENSCSEG00000006383)	EP300 (ENSCSEG00000006412)	xpnpep3 (ENSCSEG00000006554)	st13 (ENSCSEG00000006561)	rbx1 (ENSCSEG00000006574)	ENSCSEG00000006625	rangap1a (ENSCSEG00000006638)	ZC3H7B (ENSCSEG00000006655)	tefb (ENSCSEG00000006684)
Turbot	MODERN SPECIES	10	ENSSMAG00000007786	ENSSMAG00000007688	ENSSMAG00000007619	ENSSMAG00000022084	il2rb (ENSSMAG00000029707)	ENSSMAG00000007583	mpst (ENSSMAG00000007579)	mpst (ENSSMAG00000026128)	ENSSMAG00000024603	ENSSMAG00000021583	mief1 (ENSSMAG00000007530)	CTSD (ENSSMAG00000007486)	ENSSMAG00000007451	ENSSMAG00000027690	adsl (ENSSMAG00000007394)	tmem150b (ENSSMAG00000007357) #22	ENSSMAG00000007321	ENSSMAG00000007289	pvalb6 (ENSSMAG00000007278)	ENSSMAG00000007259	ENSSMAG00000007150	ENSSMAG00000007115	ENSSMAG00000007061	ENSSMAG00000007006	ENSSMAG00000034982	ENSSMAG00000036112	ENSSMAG00000033439	ENSSMAG00000006909	ENSSMAG00000037129	ENSSMAG00000006866	ENSSMAG00000006824
Carangaria_A	ANCESTRAL SPECIES	12	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643
Seriola	ANCESTRAL SPECIES	23	ENSGT00390000017592	ENSGT00940000154598	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.d	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00800000125226	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b.o	ENSGT01060000249206	ENSGT00390000015495	ENSGT00990000212830	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a
Greater amberjack	MODERN SPECIES	90	chst12a (ENSSDUG00000018290)	papola (ENSSDUG00000018247)	ENSSDUG00000018239	il2rb (ENSSDUG00000018223)	ENSSDUG00000018210	mpst (ENSSDUG00000018202)	ENSSDUG00000018187	ENSSDUG00000018180	mief1 (ENSSDUG00000018158)	ENSSDUG00000018135	ENSSDUG00000018116	atf4b (ENSSDUG00000018107)	ENSSDUG00000018096	ENSSDUG00000018093	adsl (ENSSDUG00000018054)	tmem150b (ENSSDUG00000018039) #22	ENSSDUG00000018018	ENSSDUG00000017998	ENSSDUG00000017898	pvalb6 (ENSSDUG00000017878)	ENSSDUG00000017864	ENSSDUG00000017694	ENSSDUG00000017655
Yellowtail amberjack	MODERN SPECIES	3256	chst12a (ENSSLDG00000020080)	papola (ENSSLDG00000020094)	C1QTNF6 (ENSSLDG00000020140)	ENSSLDG00000020153	ENSSLDG00000020261	mpst (ENSSLDG00000020278)	TST (ENSSLDG00000020283)	ENSSLDG00000020310	mief1 (ENSSLDG00000020322)	ENSSLDG00000020337	ENSSLDG00000020356	atf4b (ENSSLDG00000020359)	ENSSLDG00000020370	ENSSLDG00000020375	adsl (ENSSLDG00000020384)	tmem150b (ENSSLDG00000020423) #22	ENSSLDG00000020457	ENSSLDG00000020472	pvalb6 (ENSSLDG00000020512)	ENSSLDG00000020543	ENSSLDG00000020562	ENSSLDG00000020574	ENSSLDG00000020596	ENSSLDG00000020619	ENSSLDG00000020672	ENSSLDG00000020678	ENSSLDG00000020695	ENSSLDG00000020708	ENSSLDG00000020755	ENSSLDG00000020763	desi1a (ENSSLDG00000020770)
Barramundi perch	MODERN SPECIES	147	chst12a (ENSLCAG00010009699)	ENSLCAG00010009698	ENSLCAG00010009694	ENSLCAG00010009675	mpst (ENSLCAG00010009670)	TST (ENSLCAG00010009666)	ENSLCAG00010009663	ENSLCAG00010009656	ENSLCAG00010009654	mief1 (ENSLCAG00010009647)	ENSLCAG00010009642	ENSLCAG00010009639	atf4b (ENSLCAG00010009633)	ENSLCAG00010009629	adsl (ENSLCAG00010009149)	tmem150b (ENSLCAG00010009076) #22	ENSLCAG00010009072	ENSLCAG00010009064	pvalb6 (ENSLCAG00010009056)	ENSLCAG00010009050	ENSLCAG00010009049	ENSLCAG00010009041	ENSLCAG00010009033	ENSLCAG00010009024	ENSLCAG00010009018	ENSLCAG00010009010
Anabantaria	ANCESTRAL SPECIES	6	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a
Anabantoidei	ANCESTRAL SPECIES	7	ENSGT00390000017592	ENSGT00940000158573	ENSGT00940000156614.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00970000196672	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234789	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00950000182951.A.a.b.b	ENSGT00940000166738	ENSGT00940000155124	ENSGT01100000263483.F.b.a.b	ENSGT01060000249206	ENSGT00390000015495	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a	ENSGT00940000156643	ENSGT00950000182906.a.a.a	ENSGT00930000151032.A.c.b
Climbing perch	MODERN SPECIES	21	ENSATEG00000006382	ENSATEG00000006352	ENSATEG00000006340	il2rb (ENSATEG00000006333)	ENSATEG00000006302	mpst (ENSATEG00000028103)	ENSATEG00000025808	ENSATEG00000030156	ENSATEG00000029794	mief1 (ENSATEG00000006239)	ENSATEG00000006200	ENSATEG00000006194	atf4b (ENSATEG00000006189)	ENSATEG00000026437	adsl (ENSATEG00000006107)	tmem150b (ENSATEG00000006059) #22	ENSATEG00000006013	ENSATEG00000005999	pvalb6 (ENSATEG00000005983)	ENSATEG00000005959	ENSATEG00000005906	ENSATEG00000005900	ENSATEG00000025300	ENSATEG00000027637	ENSATEG00000005835	ENSATEG00000029203	ENSATEG00000030048	ENSATEG00000005806	ENSATEG00000005774	FLII (ENSATEG00000005618)	LLGL1 (ENSATEG00000005486)
Siamese fighting fish	MODERN SPECIES	19	MMD2 (ENSBSLG00000002000)	ap5z1 (ENSBSLG00000002014)	CARD11 (ENSBSLG00000002054)	chst12a (ENSBSLG00000002130)	ENSBSLG00000002143	il2rb (ENSBSLG00000002162)	ENSBSLG00000002186	mpst (ENSBSLG00000002209)	ENSBSLG00000002220	mief1 (ENSBSLG00000002229)	ENSBSLG00000002254	ENSBSLG00000002308	atf4b (ENSBSLG00000002400)	ENSBSLG00000002447	adsl (ENSBSLG00000002496)	tmem150b (ENSBSLG00000002746) #22	ENSBSLG00000002844	ENSBSLG00000002870	pvalb6 (ENSBSLG00000002881)	ENSBSLG00000002890	ENSBSLG00000002930	ENSBSLG00000002950	ENSBSLG00000002961	ENSBSLG00000002982	ENSBSLG00000002987	ENSBSLG00000003572	desi1a (ENSBSLG00000003614)	flii (ENSBSLG00000003729)	LLGL1 (ENSBSLG00000003840)	ENSBSLG00000004007	drg2 (ENSBSLG00000004069)
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000005729	ENSMAMG00000025120	ENSMAMG00000005704	il2rb (ENSMAMG00000005698)	ENSMAMG00000005676	mpst (ENSMAMG00000026004)	ENSMAMG00000025261	ENSMAMG00000025452	mief1 (ENSMAMG00000005636)	ENSMAMG00000005608	ENSMAMG00000005595	atf4b (ENSMAMG00000005592)	ENSMAMG00000028008	ENSMAMG00000005580	adsl (ENSMAMG00000005541)	tmem150b (ENSMAMG00000005525) #22	ENSMAMG00000005518	ENSMAMG00000005485	pvalb6 (ENSMAMG00000026163)	ENSMAMG00000005460	ENSMAMG00000005438	ENSMAMG00000005411	ENSMAMG00000005380	ENSMAMG00000005365	ENSMAMG00000005342	ENSMAMG00000005317	ENSMAMG00000005292	ENSMAMG00000005305	ENSMAMG00000005277	ENSMAMG00000005267	FLII (ENSMAMG00000005146)
Pinecone sodierfish	MODERN SPECIES	22	ENSMMDG00005010954	il2rb (ENSMMDG00005010957)	ENSMMDG00005010965	mpst (ENSMMDG00005010971)	TST (ENSMMDG00005010973)	ENSMMDG00005010975	ENSMMDG00005010977	ENSMMDG00005010979	ENSMMDG00005010980	mief1 (ENSMMDG00005010983)	ENSMMDG00005010986	ENSMMDG00005011005	atf4b (ENSMMDG00005011007)	ENSMMDG00005011010	adsl (ENSMMDG00005011023)	tmem150b (ENSMMDG00005011075) #22	ENSMMDG00005011077	ENSMMDG00005011080	pvalb6 (ENSMMDG00005011082)	ENSMMDG00005011099	ENSMMDG00005011125	sp100.4 (ENSMMDG00005011322)	ENSMMDG00005011328	ENSMMDG00005011330	ENSMMDG00005011333	ENSMMDG00005011336	ENSMMDG00005011340	ENSMMDG00005011344	ENSMMDG00005011345	ENSMMDG00005011349	desi1a (ENSMMDG00005011352)
Cod	MODERN SPECIES	11	ENSGMOG00000015040	ENSGMOG00000029956	ENSGMOG00000024534	kcnh4a (ENSGMOG00000015059)	kat2a (ENSGMOG00000015110)	dhx58 (ENSGMOG00000015145)	ZNF385C (ENSGMOG00000022794)	ENSGMOG00000029849	ENSGMOG00000004477	ENSGMOG00000014871	ENSGMOG00000019879	ENSGMOG00000014896	atf4b (ENSGMOG00000029120)	ENSGMOG00000014927	adsl (ENSGMOG00000014943)	tmem150b (ENSGMOG00000034643) #22	ENSGMOG00000031057	ENSGMOG00000023970	ENSGMOG00000028952	ENSGMOG00000028517	ENSGMOG00000022665	ENSGMOG00000029859	ENSGMOG00000015291	ENSGMOG00000027759	ENSGMOG00000024110	ENSGMOG00000015954	ENSGMOG00000032563	ENSGMOG00000024882	ENSGMOG00000027530	ENSGMOG00000027171	ENSGMOG00000027812
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b.h #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT00940000166105	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727	ENSGT00940000155124	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a	ENSGT00940000166738	ENSGT00920000149129	ENSGT00940000164868.B	ENSGT01100000263491.a.b.a.a.a.a.a.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b
Salmoninae	ANCESTRAL SPECIES	25	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00940000166738.j.a.a.a.a	ENSGT00920000149129.m	ENSGT00940000164868.B.b	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b
Huchen	MODERN SPECIES	365	syngr1a (ENSHHUG00000023594)	mgat3a (ENSHHUG00000023581)	ENSHHUG00000023580	il2rb (ENSHHUG00000023577)	ENSHHUG00000023390	mpst (ENSHHUG00000023389)	mpst (ENSHHUG00000023383)	ENSHHUG00000023376	mief1 (ENSHHUG00000023372)	ENSHHUG00000023366	ENSHHUG00000023350	atf4b (ENSHHUG00000023344)	ENSHHUG00000023338	adsl (ENSHHUG00000023219)	tmem150b (ENSHHUG00000023216) #22	tmem150b (ENSHHUG00000023215) #22	ENSHHUG00000023212	ENSHHUG00000023208	pvalb6 (ENSHHUG00000023206)	ENSHHUG00000023200	ENSHHUG00000023197	dnal4a (ENSHHUG00000023186)	ENSHHUG00000023148	ENSHHUG00000023146	ENSHHUG00000023137	ENSHHUG00000023134	ENSHHUG00000023129	ENSHHUG00000023036	slc25a17 (ENSHHUG00000023028)	ENSHHUG00000023026	ENSHHUG00000023018
Salmoninae_a	ANCESTRAL SPECIES	60	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00940000166738.j.a.a.a.a	ENSGT00920000149129.m	ENSGT00940000161184.c.b
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000154308.A.a.b.a.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m
Oncorhynchus_a	ANCESTRAL SPECIES	49	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000162556.D.a	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000154308.A.a.b.a.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m	ENSGT01030000234558.D.b.g.b.b
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005001137	MGAT3 (ENSOTSG00005001132)	ENSOTSG00005001126	il2rb (ENSOTSG00005001117)	ENSOTSG00005001108	mpst (ENSOTSG00005001096)	mpst (ENSOTSG00005001076)	ENSOTSG00005001070	mief1 (ENSOTSG00005001064)	ENSOTSG00005001054	ENSOTSG00005000805	atf4b (ENSOTSG00005000730)	ENSOTSG00005044974	adsl (ENSOTSG00005044092)	tmem150b (ENSOTSG00005044086) #22	tmem150b (ENSOTSG00005044085) #22	ENSOTSG00005044081	ENSOTSG00005044080	ENSOTSG00005044078	pvalb6 (ENSOTSG00005044076)	ENSOTSG00005044075	ENSOTSG00005044074	dnal4a (ENSOTSG00005044073)	ENSOTSG00005044072	ENSOTSG00005044071	ENSOTSG00005044070	ENSOTSG00005044069	sp100.4 (ENSOTSG00005044068)	slc25a17 (ENSOTSG00005044065)	ENSOTSG00005044064	ENSOTSG00005044063
Coho salmon	MODERN SPECIES	26	MGAT3 (ENSOKIG00005010972)	ENSOKIG00005010959	il2rb (ENSOKIG00005010946)	ENSOKIG00005010915	mpst (ENSOKIG00005010908)	mpst (ENSOKIG00005010905)	ENSOKIG00005010898	ENSOKIG00005010879	mief1 (ENSOKIG00005010863)	ENSOKIG00005010811	ENSOKIG00005010797	ENSOKIG00005010780	atf4b (ENSOKIG00005010768)	adsl (ENSOKIG00005009708)	ENSOKIG00005009624	tmem150b (ENSOKIG00005009597) #22	ENSOKIG00005009585	ENSOKIG00005009576	pvalb6 (ENSOKIG00005009569)	ENSOKIG00005009561	ENSOKIG00005009558	DNAL4 (ENSOKIG00005009547)	ENSOKIG00005009536	ENSOKIG00005009518	ENSOKIG00005009463	ENSOKIG00005009440	ENSOKIG00005009372	SLC25A17 (ENSOKIG00005009317)	ENSOKIG00005009309	ENSOKIG00005009302	ENSOKIG00005009294
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000049415	il2rb (ENSOMYG00000040458)	ENSOMYG00000040452	ENSOMYG00000061394	mpst (ENSOMYG00000073920)	mpst (ENSOMYG00000040444)	ENSOMYG00000040435	mief1 (ENSOMYG00000040428)	ENSOMYG00000040413	ENSOMYG00000040402	atf4b (ENSOMYG00000064242)	ENSOMYG00000055578	adsl (ENSOMYG00000040290)	ENSOMYG00000065328	tmem150b (ENSOMYG00000040236) #22	tmem150b (ENSOMYG00000040225) #22	ENSOMYG00000040210	ENSOMYG00000040203	pvalb6 (ENSOMYG00000066669)	ENSOMYG00000040182	ENSOMYG00000040170	ENSOMYG00000005630	ENSOMYG00000040143	ENSOMYG00000040104	ENSOMYG00000040015	ENSOMYG00000040005	ENSOMYG00000040001	ENSOMYG00000039996	ENSOMYG00000039987	pgls (ENSOMYG00000039981)	ENSOMYG00000039960
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	28	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g.a #22	ENSGT01030000234578.A.b.b.g.b #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.c	ENSGT00940000163727.h.b.a	ENSGT00940000163727.h.a	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000161184.c.b	ENSGT00940000164868.B.b
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000050491	c1qtnf6 (ENSSSAG00000100118)	il2rb (ENSSSAG00000050463)	UBC9 (ENSSSAG00000050408)	mpst (ENSSSAG00000050388)	mpst (ENSSSAG00000084242)	ENSSSAG00000050378	ENSSSAG00000050360	ENSSSAG00000111814	ENSSSAG00000050349	ENSSSAG00000050252	ENSSSAG00000118109	ENSSSAG00000050223	ENSSSAG00000050210	ENSSSAG00000097685	tmem150b (ENSSSAG00000122174) #22	tmem150b (ENSSSAG00000048454) #22	tmem150b (ENSSSAG00000003179) #22	adsl (ENSSSAG00000048519)	ENSSSAG00000048437	ENSSSAG00000103865	prva (ENSSSAG00000048395)	ENSSSAG00000098739	ENSSSAG00000048379	ENSSSAG00000109729	dnal4 (ENSSSAG00000101346)	ENSSSAG00000048283	ENSSSAG00000048237	ENSSSAG00000109359	ENSSSAG00000048179	ENSSSAG00000047612
Salmo	ANCESTRAL SPECIES	28	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g.a #22	ENSGT01030000234578.A.b.b.g.b #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.c	ENSGT00940000163727.h.b.a	ENSGT00940000163727.h.a	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000161184.c.b	ENSGT00940000164868.B.b	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b
Atlantic salmon	MODERN SPECIES	22	il2rb (ENSSSAG00000050463)	UBC9 (ENSSSAG00000050408)	mpst (ENSSSAG00000050388)	mpst (ENSSSAG00000084242)	ENSSSAG00000050378	ENSSSAG00000050360	ENSSSAG00000111814	ENSSSAG00000050349	ENSSSAG00000050252	ENSSSAG00000118109	ENSSSAG00000050223	ENSSSAG00000050210	ENSSSAG00000097685	tmem150b (ENSSSAG00000122174) #22	tmem150b (ENSSSAG00000048454) #22	tmem150b (ENSSSAG00000003179) #22	adsl (ENSSSAG00000048519)	ENSSSAG00000048437	ENSSSAG00000103865	prva (ENSSSAG00000048395)	ENSSSAG00000098739	ENSSSAG00000048379	ENSSSAG00000109729	dnal4 (ENSSSAG00000101346)	ENSSSAG00000048283	ENSSSAG00000048237	ENSSSAG00000109359	ENSSSAG00000048179	ENSSSAG00000047612	ENSSSAG00000112991	ENSSSAG00000047537
River trout	MODERN SPECIES	25	syngr1a (ENSSTUG00000036665)	MGAT3 (ENSSTUG00000036662)	mgat3a (ENSSTUG00000036658)	ENSSTUG00000015662	il2rb (ENSSTUG00000015644)	ENSSTUG00000015621	mpst (ENSSTUG00000015594)	ENSSTUG00000015588	ENSSTUG00000015572	mief1 (ENSSTUG00000015555)	ENSSTUG00000015502	ENSSTUG00000015488	atf4b (ENSSTUG00000015476)	ENSSTUG00000015469	adsl (ENSSTUG00000015232)	tmem150b (ENSSTUG00000015162) #22	ENSSTUG00000015140	ENSSTUG00000015129	pvalb6 (ENSSTUG00000015113)	ENSSTUG00000015096	ENSSTUG00000015091	dnal4a (ENSSTUG00000015079)	ENSSTUG00000015060	ENSSTUG00000015049	ENSSTUG00000015039	ENSSTUG00000015018	ENSSTUG00000015005	ENSSTUG00000014924	slc25a17 (ENSSTUG00000014894)	ENSSTUG00000014886	ENSSTUG00000014872
Northern pike	MODERN SPECIES	10	ENSELUG00000010523	mpst (ENSELUG00000010532)	ENSELUG00000010546	mief1 (ENSELUG00000010577)	ENSELUG00000010599	ENSELUG00000010609	atf4b (ENSELUG00000001208)	ENSELUG00000001081	ENSELUG00000010634	tlr22 (ENSELUG00000025821)	ENSELUG00000010703 #22	tlr22 (ENSELUG00000033694)	adsl (ENSELUG00000010674)	tlr22 (ENSELUG00000033008)	tmem150b (ENSELUG00000032535) #22	tmem150b (ENSELUG00000010725) #22	ENSELUG00000010769	ENSELUG00000010817	pvalb6 (ENSELUG00000033708)	ENSELUG00000010892	ENSELUG00000011038	ENSELUG00000011091	ENSELUG00000000390	ENSELUG00000000400	ENSELUG00000011147	ENSELUG00000011172	ENSELUG00000031988	ENSELUG00000011226	ENSELUG00000026457	ENSELUG00000033256	ENSELUG00000011241
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b.h #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a	ENSGT00940000156569.a.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT00940000166105	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727	ENSGT00940000155124	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a	ENSGT00940000166738	ENSGT00920000149129	ENSGT00940000164868.B	ENSGT01100000263491.a.b.a.a.a.a.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	25	ENSGT00940000160396	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00940000166738.j.a.a.a.a	ENSGT00920000149129.m	ENSGT00940000164868.B.b	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b
Huchen	MODERN SPECIES	365	FAM171A2 (ENSHHUG00000023598)	syngr1a (ENSHHUG00000023594)	mgat3a (ENSHHUG00000023581)	ENSHHUG00000023580	il2rb (ENSHHUG00000023577)	ENSHHUG00000023390	mpst (ENSHHUG00000023389)	mpst (ENSHHUG00000023383)	ENSHHUG00000023376	mief1 (ENSHHUG00000023372)	ENSHHUG00000023366	ENSHHUG00000023350	atf4b (ENSHHUG00000023344)	ENSHHUG00000023338	adsl (ENSHHUG00000023219)	tmem150b (ENSHHUG00000023216) #22	tmem150b (ENSHHUG00000023215) #22	ENSHHUG00000023212	ENSHHUG00000023208	pvalb6 (ENSHHUG00000023206)	ENSHHUG00000023200	ENSHHUG00000023197	dnal4a (ENSHHUG00000023186)	ENSHHUG00000023148	ENSHHUG00000023146	ENSHHUG00000023137	ENSHHUG00000023134	ENSHHUG00000023129	ENSHHUG00000023036	slc25a17 (ENSHHUG00000023028)	ENSHHUG00000023026
Salmoninae_a	ANCESTRAL SPECIES	60	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00940000166738.j.a.a.a.a	ENSGT00920000149129.m
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00390000008221.b.d	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000154308.A.a.b.a.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000058628	ENSOMYG00000049415	il2rb (ENSOMYG00000040458)	ENSOMYG00000040452	ENSOMYG00000061394	mpst (ENSOMYG00000073920)	mpst (ENSOMYG00000040444)	ENSOMYG00000040435	mief1 (ENSOMYG00000040428)	ENSOMYG00000040413	ENSOMYG00000040402	atf4b (ENSOMYG00000064242)	ENSOMYG00000055578	adsl (ENSOMYG00000040290)	ENSOMYG00000065328	tmem150b (ENSOMYG00000040236) #22	tmem150b (ENSOMYG00000040225) #22	ENSOMYG00000040210	ENSOMYG00000040203	pvalb6 (ENSOMYG00000066669)	ENSOMYG00000040182	ENSOMYG00000040170	ENSOMYG00000005630	ENSOMYG00000040143	ENSOMYG00000040104	ENSOMYG00000040015	ENSOMYG00000040005	ENSOMYG00000040001	ENSOMYG00000039996	ENSOMYG00000039987	pgls (ENSOMYG00000039981)
Oncorhynchus_a	ANCESTRAL SPECIES	49	ENSGT00390000008221.b.d	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00740000115744.g	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000162556.D.a	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000163727.h.b	ENSGT00940000163727.h.a	ENSGT01000000221338	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000154308.A.a.b.a.b.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.b	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.b	ENSGT00550000075110.m
Chinook salmon	MODERN SPECIES	33	FAM171A2 (ENSOTSG00005001143)	ENSOTSG00005001137	MGAT3 (ENSOTSG00005001132)	ENSOTSG00005001126	il2rb (ENSOTSG00005001117)	ENSOTSG00005001108	mpst (ENSOTSG00005001096)	mpst (ENSOTSG00005001076)	ENSOTSG00005001070	mief1 (ENSOTSG00005001064)	ENSOTSG00005001054	ENSOTSG00005000805	atf4b (ENSOTSG00005000730)	ENSOTSG00005044974	adsl (ENSOTSG00005044092)	tmem150b (ENSOTSG00005044086) #22	tmem150b (ENSOTSG00005044085) #22	ENSOTSG00005044081	ENSOTSG00005044080	ENSOTSG00005044078	pvalb6 (ENSOTSG00005044076)	ENSOTSG00005044075	ENSOTSG00005044074	dnal4a (ENSOTSG00005044073)	ENSOTSG00005044072	ENSOTSG00005044071	ENSOTSG00005044070	ENSOTSG00005044069	sp100.4 (ENSOTSG00005044068)	slc25a17 (ENSOTSG00005044065)	ENSOTSG00005044064
Salmo	ANCESTRAL SPECIES	28	ENSGT00390000008221.b.d	ENSGT00940000167614.f.a	ENSGT00510000049239.a.c.c	ENSGT00550000075088.a.b.f	ENSGT00510000046773.a.b.c.a.u	ENSGT00510000046773.a.b.c.a.v	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00990000211443	ENSGT00390000013127.a.x	ENSGT00940000155733.a.b.f	ENSGT01030000234599.a.b.d.b.b.b	ENSGT00530000063801.a.b.d	ENSGT00940000166816.b	ENSGT00950000183122.C.p	ENSGT01030000234578.A.b.b.h.a #22	ENSGT01030000234578.A.b.b.g.a #22	ENSGT01030000234578.A.b.b.g.b #22	ENSGT00940000157367.a.a.f	ENSGT00940000156569.a.a.b	ENSGT00940000159653.g.a.d	ENSGT00940000153560.b.b.b.g.b	ENSGT01060000248591.a.a.a.b.a.d	ENSGT00940000161265.e.a.c	ENSGT00940000163727.h.b.a	ENSGT00940000163727.h.a	ENSGT00940000155124	ENSGT00940000166738.i	ENSGT00940000169047	ENSGT00920000149129.m	ENSGT00940000161184.c.b
Atlantic salmon	MODERN SPECIES	22	c1qtnf6 (ENSSSAG00000100118)	il2rb (ENSSSAG00000050463)	UBC9 (ENSSSAG00000050408)	mpst (ENSSSAG00000050388)	mpst (ENSSSAG00000084242)	ENSSSAG00000050378	ENSSSAG00000050360	ENSSSAG00000111814	ENSSSAG00000050349	ENSSSAG00000050252	ENSSSAG00000118109	ENSSSAG00000050223	ENSSSAG00000050210	ENSSSAG00000097685	tmem150b (ENSSSAG00000122174) #22	tmem150b (ENSSSAG00000048454) #22	tmem150b (ENSSSAG00000003179) #22	adsl (ENSSSAG00000048519)	ENSSSAG00000048437	ENSSSAG00000103865	prva (ENSSSAG00000048395)	ENSSSAG00000098739	ENSSSAG00000048379	ENSSSAG00000109729	dnal4 (ENSSSAG00000101346)	ENSSSAG00000048283	ENSSSAG00000048237	ENSSSAG00000109359	ENSSSAG00000048179	ENSSSAG00000047612	ENSSSAG00000112991
Salmoninae	ANCESTRAL SPECIES	428	ENSGT00940000160724.h	ENSGT00950000183184.b.b.c	ENSGT00950000182935.B.b.c.h.b	ENSGT00390000008221.b.c	ENSGT00940000167614.f.b	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c	ENSGT00940000167870	ENSGT01040000241311	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b #22	ENSGT00940000157367.a.a.e	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a	ENSGT00950000182951.A.a.b.b
Huchen	MODERN SPECIES	668	ENSHHUG00000019853	ENSHHUG00000019727	ENSHHUG00000019717	FAM171A2 (ENSHHUG00000019703)	syngr1a (ENSHHUG00000019699)	MGAT3 (ENSHHUG00000019696)	ENSHHUG00000019691	il2rb (ENSHHUG00000019654)	ENSHHUG00000019563	ENSHHUG00000019555	mief1 (ENSHHUG00000019551)	ENSHHUG00000019492	ENSHHUG00000019456	ENSHHUG00000019448	adsl (ENSHHUG00000019133)	tmem150b (ENSHHUG00000019105) #22	ENSHHUG00000019097	ENSHHUG00000019090	ENSHHUG00000019079	pvalb6 (ENSHHUG00000019066)	ENSHHUG00000019058
Salmoninae_a	ANCESTRAL SPECIES	122	ENSGT00940000158410.g.a.a.d	ENSGT00940000176123.d.b	ENSGT00940000160724.h	ENSGT00950000183184.b.b.c	ENSGT00950000182935.B.b.c.h.b	ENSGT00940000167614.f.b	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b #22	ENSGT00940000157367.a.a.e	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a
Oncorhynchus	ANCESTRAL SPECIES	64	ENSGT00950000182950.C.i	ENSGT00940000158410.g.a.a.d	ENSGT00940000160724.h	ENSGT00950000183184.b.b.c	ENSGT00950000182935.B.b.c.h.b	ENSGT00940000167614.f.b	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b #22	ENSGT00940000157367.a.a.e	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	71	ENSGT00950000182950.C.i	ENSGT00940000158410.g.a.a.d	ENSGT00940000160724.h	ENSGT00950000183184.b.b.c	ENSGT00950000182935.B.b.c.h.b	ENSGT00940000167614.f.b	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT01030000234887	ENSGT00390000013127.a.y	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b #22	ENSGT00940000157367.a.a.e	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00940000161265.e.a.c	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000164868.B.a.a	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a
Chinook salmon	MODERN SPECIES	19	ENSOTSG00005028800	KANSL1 (ENSOTSG00005028793)	cdc27 (ENSOTSG00005027694)	ENSOTSG00005023042	itga2b (ENSOTSG00005023007)	FAM171A2 (ENSOTSG00005023005)	syngr1a (ENSOTSG00005023004)	ENSOTSG00005023003	il2rb (ENSOTSG00005022999)	ENSOTSG00005022997	ENSOTSG00005022996	mief1 (ENSOTSG00005022995)	ENSOTSG00005022993	atf4b (ENSOTSG00005022991)	adsl (ENSOTSG00005022703)	tmem150b (ENSOTSG00005022701) #22	ENSOTSG00005022700	ENSOTSG00005022699	pvalb6 (ENSOTSG00005022697)	ENSOTSG00005022696	ENSOTSG00005022695	ENSOTSG00005022694	ENSOTSG00005022485	ENSOTSG00005022479	ENSOTSG00005022477	slc25a17 (ENSOTSG00005022473)	ENSOTSG00005022472	ENSOTSG00005022471	ENSOTSG00005022468	pgls (ENSOTSG00005022467)	COLGALT1 (ENSOTSG00005021985)
Coho salmon	MODERN SPECIES	1	ENSOKIG00005001905	FAM171A2 (ENSOKIG00005001900)	ENSOKIG00005001890	syngr1a (ENSOKIG00005037948)	ENSOKIG00005037943	ENSOKIG00005037921	il2rb (ENSOKIG00005037885)	ENSOKIG00005037852	ENSOKIG00005037845	ENSOKIG00005037835	MIEF1 (ENSOKIG00005037819)	ENSOKIG00005037766	atf4b (ENSOKIG00005037753)	ENSOKIG00005037747	adsl (ENSOKIG00005037362)	tmem150b (ENSOKIG00005037309) #22	ENSOKIG00005037301	ENSOKIG00005037287	ENSOKIG00005037267	pvalb6 (ENSOKIG00005037232)	ENSOKIG00005037224	ENSOKIG00005037214	DNAL4 (ENSOKIG00005037195)	ENSOKIG00005036494	ENSOKIG00005036443	ENSOKIG00005036432	slc25a17 (ENSOKIG00005036395)	ENSOKIG00005036385	ENSOKIG00005036365	ENSOKIG00005036353	COLGALT1 (ENSOKIG00005035949)
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000040302	myl4 (ENSOMYG00000040097)	ENSOMYG00000040071	ENSOMYG00000077165	cdc27 (ENSOMYG00000039862)	ENSOMYG00000038030	ENSOMYG00000037682	syngr1a (ENSOMYG00000049893)	il2rb2 (ENSOMYG00000037653)	ENSOMYG00000037609	ENSOMYG00000037574	ENSOMYG00000037568	ENSOMYG00000037556	atf4b (ENSOMYG00000037537)	adsl (ENSOMYG00000036187)	tmem150b (ENSOMYG00000036021) #22	ENSOMYG00000036011	ENSOMYG00000056746	ENSOMYG00000036001	pvalb6 (ENSOMYG00000035985)	ENSOMYG00000063241	ENSOMYG00000067202	ENSOMYG00000035950	ENSOMYG00000035942	ENSOMYG00000035111	ENSOMYG00000035022	ENSOMYG00000035016	ENSOMYG00000035005	ENSOMYG00000034991	ENSOMYG00000034982	ENSOMYG00000034976
Salmo	ANCESTRAL SPECIES	96	ENSGT00950000182950.C.i	ENSGT00940000158410.g.a.a.d	ENSGT00940000176123.d.b	ENSGT00940000160724.h	ENSGT00950000183184.b.b.c	ENSGT00950000182935.B.b.c.h.b	ENSGT00940000167614.f.b	ENSGT00510000049239.a.c.d	ENSGT00550000075088.a.b.e	ENSGT00740000115744.h	ENSGT00390000013127.a.y	ENSGT00940000155733.a.b.e	ENSGT00530000063801.a.b.c	ENSGT00940000166816.a	ENSGT00950000183122.C.o	ENSGT01030000234578.A.b.b.h.b #22	ENSGT00940000157367.a.a.e	ENSGT00940000156569.a.a.a	ENSGT00940000159653.g.a.c	ENSGT00940000153560.b.b.b.g.a	ENSGT01060000248591.a.a.a.b.a.c	ENSGT00950000182951.A.a.b.b	ENSGT00940000163727.g	ENSGT00940000166738.j.a.b	ENSGT00920000149129.n	ENSGT00940000162287.E	ENSGT01100000263491.a.b.a.a.a.a.a.b.lb.b.a	ENSGT01100000263491.a.b.a.a.a.b.b.b.b.a	ENSGT00550000075110.n	ENSGT01030000234558.D.b.g.b.a	ENSGT00950000183110.a.m
River trout	MODERN SPECIES		ENSSTUG00000009311	cdc27 (ENSSTUG00000008676)	ENSSTUG00000007670	ENSSTUG00000007623	itga2b (ENSSTUG00000007596)	FAM171A2 (ENSSTUG00000007575)	ENSSTUG00000007568	ENSSTUG00000007556	ENSSTUG00000007529	ENSSTUG00000007522	mief1 (ENSSTUG00000007516)	ENSSTUG00000007493	atf4b (ENSSTUG00000007490)	ENSSTUG00000007484	adsl (ENSSTUG00000005748)	tmem150b (ENSSTUG00000005676) #22	ENSSTUG00000005656	ENSSTUG00000005643	pvalb6 (ENSSTUG00000005614)	ENSSTUG00000005607	ENSSTUG00000005600	ENSSTUG00000005582	ENSSTUG00000005494	ENSSTUG00000005477	ENSSTUG00000005453	slc25a17 (ENSSTUG00000005399)	ENSSTUG00000005386	ENSSTUG00000005375	ENSSTUG00000005368	pgls (ENSSTUG00000005354)	COLGALT1 (ENSSTUG00000005131)
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	10	ENSELUG00000033256	ENSELUG00000026457	ENSELUG00000011226	ENSELUG00000031988	ENSELUG00000011172	ENSELUG00000011147	ENSELUG00000000400	ENSELUG00000000390	ENSELUG00000011091	ENSELUG00000011038	ENSELUG00000010892	pvalb6 (ENSELUG00000033708)	ENSELUG00000010817	ENSELUG00000010769	tmem150b (ENSELUG00000010725) #22	tmem150b (ENSELUG00000032535) #22	tlr22 (ENSELUG00000033008)	adsl (ENSELUG00000010674)	tlr22 (ENSELUG00000033694)	ENSELUG00000010703 #22	tlr22 (ENSELUG00000025821)	ENSELUG00000010634	ENSELUG00000001081	atf4b (ENSELUG00000001208)	ENSELUG00000010609	ENSELUG00000010599	mief1 (ENSELUG00000010577)	ENSELUG00000010546	mpst (ENSELUG00000010532)	ENSELUG00000010523	il2rb (ENSELUG00000010497)
Northern pike	MODERN SPECIES	10	ENSELUG00000011172	ENSELUG00000011147	ENSELUG00000000400	ENSELUG00000000390	ENSELUG00000011091	ENSELUG00000011038	ENSELUG00000010892	pvalb6 (ENSELUG00000033708)	ENSELUG00000010817	ENSELUG00000010769	tmem150b (ENSELUG00000010725) #22	tmem150b (ENSELUG00000032535) #22	tlr22 (ENSELUG00000033008)	adsl (ENSELUG00000010674)	tlr22 (ENSELUG00000033694)	ENSELUG00000010703 #22	tlr22 (ENSELUG00000025821)	ENSELUG00000010634	ENSELUG00000001081	atf4b (ENSELUG00000001208)	ENSELUG00000010609	ENSELUG00000010599	mief1 (ENSELUG00000010577)	ENSELUG00000010546	mpst (ENSELUG00000010532)	ENSELUG00000010523	il2rb (ENSELUG00000010497)	ENSELUG00000000377	mgat3a (ENSELUG00000010460)	ENSELUG00000025393	ENSELUG00000010434
Otomorpha	ANCESTRAL SPECIES	27	ENSGT00940000160724	ENSGT00390000008221.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b.b	ENSGT00510000046773.a.b.c.a	ENSGT00970000196672	ENSGT00950000183045.A.b	ENSGT00740000115744	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000160024	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g
Otophysi	ANCESTRAL SPECIES	46	ENSGT00940000161108	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g
Characiphysae	ANCESTRAL SPECIES	11	ENSGT00940000161230	ENSGT00940000161108	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b
Channel catfish	MODERN SPECIES	11	hoxb9 (ENSIPUG00000002484)	hoxb8a (ENSIPUG00000002469)	hoxb7-a (ENSIPUG00000002446)	hoxb6a (ENSIPUG00000002440)	hoxb5a (ENSIPUG00000002437)	hoxb4 (ENSIPUG00000002433)	hoxb3a (ENSIPUG00000002427)	hoxb2 (ENSIPUG00000002425)	hoxb1a (ENSIPUG00000002421)	cbx1a (ENSIPUG00000002405)	nfe2l1a (ENSIPUG00000002401)	COPZ1 (ENSIPUG00000002355)	prr15la (ENSIPUG00000002338)	ENSIPUG00000002327	ADSL (ENSIPUG00000002270)	tmem150b (ENSIPUG00000002228) #22	PDGFB (ENSIPUG00000002192)	ENSIPUG00000002159	pvalb7 (ENSIPUG00000002145)	ENSIPUG00000002119	ENSIPUG00000002113	ENSIPUG00000002107	dnal4a (ENSIPUG00000002099)	mvp (ENSIPUG00000002045)	ENSIPUG00000002035	ENSIPUG00000002029	ENSIPUG00000001968	ENSIPUG00000001963	DOC2A (ENSIPUG00000001924)	nupr1 (ENSIPUG00000001913)	sgf29 (ENSIPUG00000001851)
Characiphysae_b	ANCESTRAL SPECIES	30	ENSGT00940000161230	ENSGT00940000161108	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b
Electric eel	MODERN SPECIES	26	hoxb8a (ENSEEEG00000003979)	hoxb7a (ENSEEEG00000003976)	hoxb6a (ENSEEEG00000003973)	hoxb5a (ENSEEEG00000003969)	hoxb4a (ENSEEEG00000003963)	hoxb3a (ENSEEEG00000003961)	hoxb2a (ENSEEEG00000003959)	hoxb1a (ENSEEEG00000003958)	cbx1a (ENSEEEG00000003957)	nfe2l1a (ENSEEEG00000003956)	copz2 (ENSEEEG00000003954)	prr15la (ENSEEEG00000003950)	ENSEEEG00000003947	ENSEEEG00000003946	adsl (ENSEEEG00000003851)	tmem150b (ENSEEEG00000003830) #22	ENSEEEG00000003824	csf2rb (ENSEEEG00000003819)	pvalb6 (ENSEEEG00000003816)	CBX6 (ENSEEEG00000003814)	ENSEEEG00000003812	dnal4a (ENSEEEG00000003810)	ENSEEEG00000003807	mvp (ENSEEEG00000002941)	ENSEEEG00000002879	ENSEEEG00000002878	ENSEEEG00000002876	ENSEEEG00000002875	nupr1b (ENSEEEG00000002874)	sgf29 (ENSEEEG00000002871)	nfatc2ip (ENSEEEG00000002869)
Characoidei	ANCESTRAL SPECIES	25	ENSGT00940000161529	ENSGT00940000161230	ENSGT00940000161108	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00940000178227.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a.a	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000174861	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b
Red-bellied piranha	MODERN SPECIES	12	hoxb8a (ENSPNAG00000015517)	hoxb7a (ENSPNAG00000015508)	hoxb6a (ENSPNAG00000015499)	hoxb5a (ENSPNAG00000015488)	hoxb4a (ENSPNAG00000015473)	hoxb3a (ENSPNAG00000015463)	hoxb2a (ENSPNAG00000015444)	hoxb1a (ENSPNAG00000015431)	cbx1a (ENSPNAG00000015386)	nfe2l1a (ENSPNAG00000015355)	copz2 (ENSPNAG00000015344)	ENSPNAG00000015260	prr15la (ENSPNAG00000015234)	ENSPNAG00000007053	adsl (ENSPNAG00000015193)	tmem150b (ENSPNAG00000015100) #22	ENSPNAG00000015029	ENSPNAG00000015012	pvalb6 (ENSPNAG00000014970)	ENSPNAG00000014949	CBX6 (ENSPNAG00000014919)	ENSPNAG00000014911	dnal4a (ENSPNAG00000014898)	mvp (ENSPNAG00000004713)	ENSPNAG00000003259	ENSPNAG00000003251	ENSPNAG00000003243	ENSPNAG00000014709	DOC2A (ENSPNAG00000014692)	nupr1b (ENSPNAG00000014664)	sgf29 (ENSPNAG00000014651)
Mexicana tetra	MODERN SPECIES	143	hoxb7a (ENSAMXG00000043718)	hoxb6a (ENSAMXG00000029976)	hoxb5a (ENSAMXG00000030695)	hoxb4a (ENSAMXG00000015999)	hoxb3a (ENSAMXG00000041474)	hoxb2a (ENSAMXG00000016026)	hoxb1a (ENSAMXG00000042720)	eve1 (ENSAMXG00000033002)	cbx1a (ENSAMXG00000037761)	nfe2l1a (ENSAMXG00000030680)	copz2 (ENSAMXG00000042171)	prr15la (ENSAMXG00000025774)	ENSAMXG00000035669	ENSAMXG00000002620	adsl (ENSAMXG00000041444)	tmem150b (ENSAMXG00000040509) #22	ENSAMXG00000041936	ENSAMXG00000044079	pvalb6 (ENSAMXG00000040987)	ENSAMXG00000032398	ENSAMXG00000031801	ENSAMXG00000033964	dnal4a (ENSAMXG00000039111)	mvp (ENSAMXG00000039149)	ENSAMXG00000029031	ENSAMXG00000032552	ENSAMXG00000003448	ENSAMXG00000029620	ENSAMXG00000040820	nupr1b (ENSAMXG00000042734)	sgf29 (ENSAMXG00000003395)
Cyprinoidei	ANCESTRAL SPECIES	65	ENSGT00940000161230	ENSGT00940000161108	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774	ENSGT00940000155029.c.b	ENSGT00940000166856	ENSGT00940000154152.b.a	ENSGT00950000182892.a.b.a.b.b	ENSGT00390000004405.b	ENSGT00750000118756.b	ENSGT00940000154534.b.a	ENSGT00530000063801.a.b	ENSGT00940000166816	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00510000049239.b.a	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	24													ENSGT00530000063801.a.b.b	ENSGT00940000166816.f	ENSGT00950000183122.C.k.a	ENSGT01030000234578.A.b.b.i #22	ENSGT00940000157367.a.a.b	ENSGT00940000178227.a	ENSGT00510000049239.b.a.b	ENSGT00940000159653.g.a.b	ENSGT00940000153560.b.b.b.g.d	ENSGT00940000154405.a.a.r.b	ENSGT01060000248591.a.a.a.b.a.a	ENSGT00940000161265.e.a.a.a.b	ENSGT00940000155124	ENSGT00940000166738.d	ENSGT01060000249904.c.a	ENSGT01060000249904.c.b	ENSGT00940000169047.b.b.a.b	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e
Goldfish	MODERN SPECIES	20	hoxb8a (ENSCARG00000028123)	hoxb7a (ENSCARG00000028132)	hoxb6a (ENSCARG00000028135)	hoxb5a (ENSCARG00000028144)	hoxb4a (ENSCARG00000028152)	hoxb3a (ENSCARG00000028156)	hoxb2a (ENSCARG00000028169)	hoxb1a (ENSCARG00000028172)	cbx1a (ENSCARG00000019197)	nfe2l1a (ENSCARG00000019208)	copz2 (ENSCARG00000019212)	prr15la (ENSCARG00000019228)	atf4b (ENSCARG00000019233)	ENSCARG00000019239	adsl (ENSCARG00000019303)	tmem150b (ENSCARG00000020774) #22	ENSCARG00000020800	csf2rb (ENSCARG00000020815)	pvalb6 (ENSCARG00000020823)	ENSCARG00000020833	CBX6 (ENSCARG00000020839)	ENSCARG00000020843	dnal4a (ENSCARG00000020846)	ENSCARG00000020861	ENSCARG00000020914	ENSCARG00000020919	ENSCARG00000020921	ENSCARG00000020934	ENSCARG00000020937	nuggc.3 (ENSCARG00000020949)	ENSCARG00000020961
Cyprininae_a	ANCESTRAL SPECIES	12	ENSGT00940000161230.b	ENSGT00940000161108.d	ENSGT00940000158354.d	ENSGT00940000162072	ENSGT00940000159774.mc	ENSGT00940000155029.c.b	ENSGT00940000166856.b	ENSGT00940000154152.b.a.c	ENSGT00950000182892.a.b.a.b.b.a	ENSGT00390000004405.b.a	ENSGT00750000118756.b	ENSGT00940000154534.b.a.d	ENSGT00530000063801.a.b.b	ENSGT00940000166816.f	ENSGT00950000183122.C.k.a	ENSGT01030000234578.A.b.b.i #22	ENSGT00940000157367.a.a.b	ENSGT00940000178227.a	ENSGT00940000159653.g.a.b	ENSGT00940000153560.b.b.b.g.d	ENSGT00940000154405.a.a.r.b	ENSGT01060000248591.a.a.a.b.a.a	ENSGT00940000161265.e.a.a.a.a	ENSGT00940000155124	ENSGT00940000166738.d	ENSGT01060000249904.c.a	ENSGT01060000249904.c.b	ENSGT00940000169047.b.b.a.b	ENSGT00940000169047.b.a.a	ENSGT00940000163472.i.a.a.e	ENSGT00920000149129.k
Common carp reference	MODERN SPECIES	1	hoxb7a (ENSCCRG00000077126)	hoxb6a (ENSCCRG00000070113)	hoxb5a (ENSCCRG00000080254)	ENSCCRG00000014686	hoxb3a (ENSCCRG00000045556)	hoxb2a (ENSCCRG00000075376)	hoxb1a (ENSCCRG00000062567)	cbx1a (ENSCCRG00000073491)	nfe2l1a (ENSCCRG00000038632)	copz2 (ENSCCRG00000038644)	ENSCCRG00000074161	prr15la (ENSCCRG00000077573)	atf4b (ENSCCRG00000038832)	ENSCCRG00000072081	adsl (ENSCCRG00000061486)	tmem150b (ENSCCRG00000025891) #22	ENSCCRG00000038855	ENSCCRG00000053833	pvalb6 (ENSCCRG00000038877)	ENSCCRG00000063010	ENSCCRG00000068136	ENSCCRG00000053941	ENSCCRG00000063988	ENSCCRG00000014112	ENSCCRG00000042697	ENSCCRG00000065208	sp100.4 (ENSCCRG00000029212)	sp100.4 (ENSCCRG00000047698)	ENSCCRG00000020937	ENSCCRG00000070203	ENSCCRG00000013625
Golden-line barbel	MODERN SPECIES	65	hoxb9a (ENSSGRG00000047001)	HOXB8 (ENSSGRG00000046999)	hoxb7a (ENSSGRG00000046998)	hoxb6a (ENSSGRG00000046997)	hoxb5a (ENSSGRG00000046996)	hoxb4a (ENSSGRG00000046993)	hoxb3a (ENSSGRG00000046991)	hoxb2a (ENSSGRG00000046989)	hoxb1a (ENSSGRG00000046988)	cbx1a (ENSSGRG00000046987)	copz2 (ENSSGRG00000046971)	prr15la (ENSSGRG00000046968)	atf4b (ENSSGRG00000046967)	ENSSGRG00000046966	adsl (ENSSGRG00000046932)	tmem150b (ENSSGRG00000046929) #22	ENSSGRG00000046927	csf2rb (ENSSGRG00000046925)	pvalb6 (ENSSGRG00000046924)	ENSSGRG00000046922	CBX6 (ENSSGRG00000046921)	ENSSGRG00000046920	dnal4a (ENSSGRG00000046919)	ENSSGRG00000046918	ENSSGRG00000046917	ENSSGRG00000046916	ENSSGRG00000046914	zgc:171506 (ENSSGRG00000046913)
Cyprininae	ANCESTRAL SPECIES	1452															ENSGT00950000183122.C.k.b	ENSGT01030000234578.A.b.b.j #22
Cyprininae_a	ANCESTRAL SPECIES	195	ENSGT00940000159029.j	ENSGT00940000163268.e.b.a	ENSGT00940000161386.g	ENSGT00940000161529.u.a.a.b	ENSGT00940000161529.u.a.b	ENSGT00940000161230.a	ENSGT00940000161108.c	ENSGT00940000159774.lc	ENSGT00940000166856.a	ENSGT00940000154152.b.a.d	ENSGT00950000182892.a.b.a.b.b.b	ENSGT00390000004405.b.b	ENSGT00940000154534.b.a.c	ENSGT00530000063801.a.b.a	ENSGT00940000166816.e	ENSGT01030000234578.A.b.b.j #22	ENSGT00950000183122.C.k.b	ENSGT00940000157367.a.a.a
Common carp reference	MODERN SPECIES	3	atp5mc1 (ENSCCRG00000062850)	eve1 (ENSCCRG00000074310)	hoxb13a (ENSCCRG00000066654)	hoxb10a (ENSCCRG00000031188)	hoxb9a (ENSCCRG00000056274)	hoxb8a (ENSCCRG00000060406)	hoxb6a (ENSCCRG00000014689)	hoxb5a (ENSCCRG00000014717)	hoxb1a (ENSCCRG00000074754)	cbx1a (ENSCCRG00000055885)	nfe2l1a (ENSCCRG00000065851)	copz2 (ENSCCRG00000023103)	prr15la (ENSCCRG00000072432)	atf4b (ENSCCRG00000038852)	ENSCCRG00000038834	tmem150b (ENSCCRG00000028470) #22	ENSCCRG00000064343	ENSCCRG00000055397	csf2rb (ENSCCRG00000038862)	ENSCCRG00000078838	csf2rb (ENSCCRG00000024018)	pvalb6 (ENSCCRG00000012986)	ENSCCRG00000063554	ENSCCRG00000037000	ENSCCRG00000000363	ENSCCRG00000000373	dnal4a (ENSCCRG00000052443)	ENSCCRG00000014127	ENSCCRG00000055939	ENSCCRG00000054498	sp100.4 (ENSCCRG00000048414)
Goldfish	MODERN SPECIES	22	ENSCARG00000002175	cdc27 (ENSCARG00000002105)	CRHR1 (ENSCARG00000001644)	ENSCARG00000001568	FAM171A2 (ENSCARG00000001565)	syngr1a (ENSCARG00000001561)	tcap (ENSCARG00000001558)	ENSCARG00000001555	ENSCARG00000001551	zgc:123295 (ENSCARG00000001546)	ENSCARG00000001527	cdipt (ENSCARG00000001517)	ENSCARG00000001514	nlk1 (ENSCARG00000001510)	adsl (ENSCARG00000001305)	tmem150b (ENSCARG00000001244) #22	ENSCARG00000001238	ENSCARG00000001233	csf2rb (ENSCARG00000001229)	pvalb6 (ENSCARG00000001222)	CBX6 (ENSCARG00000001216)	ENSCARG00000001209	ENSCARG00000001205	dnal4a (ENSCARG00000001203)	ENSCARG00000001196	sp100.4 (ENSCARG00000001193)	ENSCARG00000001190	ENSCARG00000001187	ENSCARG00000001175	MCHR1 (ENSCARG00000001171)	grb2b (ENSCARG00000001169)
Zebrafish	MODERN SPECIES	18	hoxb7a (ENSDARG00000056030)	hoxb3a (ENSDARG00000029263)	hoxb6a (ENSDARG00000010630)	hoxb5a (ENSDARG00000013057)	hoxb4a (ENSDARG00000013533)	hoxb2a (ENSDARG00000000175)	hoxb1a (ENSDARG00000008174)	cbx1a (ENSDARG00000004189)	nfe2l1a (ENSDARG00000030616)	copz2 (ENSDARG00000006786)	ENSDARG00000097637	prr15la (ENSDARG00000025615)	atf4b (ENSDARG00000038141)	ENSDARG00000074773	adsl (ENSDARG00000017049)	tmem150b (ENSDARG00000056144) #22	ENSDARG00000038139	pvalb6 (ENSDARG00000009311)	csf2rb (ENSDARG00000076586)	ENSDARG00000016483	CBX6 (ENSDARG00000097543)	ENSDARG00000040430	dnal4a (ENSDARG00000031116)	ENSDARG00000055359	ENSDARG00000102588	ENSDARG00000090449	ENSDARG00000099247	ENSDARG00000104350	zgc:171506 (ENSDARG00000078206)	ENSDARG00000104144	sp100.4 (ENSDARG00000038133)
Clupeiformes	ANCESTRAL SPECIES	29	ENSGT00950000183184.b.b	ENSGT01050000244893.c.a.b.h	ENSGT00870000136549	ENSGT00950000182935.B.b.c	ENSGT00390000008221.b	ENSGT00940000160396	ENSGT00510000049239.a.c	ENSGT00550000075088.a.b.b	ENSGT00510000046773.a.b.c.a	ENSGT00950000183045.A.b	ENSGT00390000013127.a	ENSGT00940000155733.a.b	ENSGT00530000063801.a.b	ENSGT00940000162556.D.a	ENSGT00950000183122.C	ENSGT01030000234578.A.b.b #22	ENSGT00940000157367.a.a	ENSGT00510000048963	ENSGT00940000159653.g.a	ENSGT00940000153560.b.b.b.g	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.a	ENSGT00940000161265.e.a
Denticle herring	MODERN SPECIES	17	FAM171A2 (ENSDCDG00000008510)	syngr1a (ENSDCDG00000008522)	mgat3a (ENSDCDG00000008530)	ENSDCDG00000008540	il2rb (ENSDCDG00000008561)	mpst (ENSDCDG00000008659)	ENSDCDG00000008666	ENSDCDG00000008679	ENSDCDG00000008692	mief1 (ENSDCDG00000008699)	ENSDCDG00000008741	napsa (ENSDCDG00000009245)	ENSDCDG00000009263	atf4b (ENSDCDG00000009268)	adsl (ENSDCDG00000009345)	tmem150b (ENSDCDG00000009862) #22	ENSDCDG00000009885	ENSDCDG00000009896	ENSDCDG00000009905	pvalb6 (ENSDCDG00000009913)	ENSDCDG00000009919	CBX6 (ENSDCDG00000009927)	ENSDCDG00000009931	DNAL4 (ENSDCDG00000009933)	ENSDCDG00000009936	ENSDCDG00000009938	ENSDCDG00000009945	nptx1l (ENSDCDG00000010974)	pecam1a (ENSDCDG00000010988)	PPP1R27 (ENSDCDG00000011012)	mcrip1 (ENSDCDG00000011019)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	111	ENSGT01030000234599.a.a	ENSGT01050000244893.c.a.b	ENSGT00870000136549	ENSGT00950000182935.B.b.c.c	ENSGT00390000008221.a	ENSGT00940000167614.h	ENSGT00510000049239.a.b	ENSGT00940000160104	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT00950000183045.A.b	ENSGT00940000155733.a.b.h	ENSGT00530000063801.a.a.b	ENSGT00940000178559	ENSGT00940000158652	ENSGT01030000234578.A.b.b.k #22	ENSGT00940000160024	ENSGT00940000157367.a.b.h	ENSGT00940000178227	ENSGT00510000048561	ENSGT00940000159653.g.b.b	ENSGT00940000153560.b.b.b.h	ENSGT00940000158756	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.a	ENSGT00940000153239.B	ENSGT00940000158365.f.a
P. kingsleyae	MODERN SPECIES	540	ENSPKIG00000007789	SYNGR1 (ENSPKIG00000007767)	TAB1 (ENSPKIG00000007698)	rpl3 (ENSPKIG00000007622)	MGAT3 (ENSPKIG00000007586)	ENSPKIG00000007556	il2rb (ENSPKIG00000007443)	mpst (ENSPKIG00000007408)	ENSPKIG00000007399	ENSPKIG00000007395	mief1 (ENSPKIG00000007377)	ENSPKIG00000007349	ENSPKIG00000007320	ATF4 (ENSPKIG00000007307)	adsl (ENSPKIG00000007255)	tmem150b (ENSPKIG00000007220) #22
Asian bonytongue	MODERN SPECIES	18	ENSSFOG00015010652	SRSF1 (ENSSFOG00015026484)	ENSSFOG00015031566	ENSSFOG00015005544	ENSSFOG00015031228	ENSSFOG00015030032	ENSSFOG00015030556	ENSSFOG00015026218	ENSSFOG00015025063	ENSSFOG00015005103	cenpx (ENSSFOG00015005881)	notum1a (ENSSFOG00015021638)	MYADML2 (ENSSFOG00015021653)	pycr1a (ENSSFOG00015021093)	MAFG (ENSSFOG00015021695)	tmem150b (ENSSFOG00015021702) #22	ENSSFOG00015021713	PCYT2 (ENSSFOG00015021733)	npb (ENSSFOG00015021762)	slc26a11 (ENSSFOG00015021767)	rnf213a (ENSSFOG00015021807)	SOX9 (ENSSFOG00015022027)	SSTR2 (ENSSFOG00015022648)	USP22 (ENSSFOG00015022654)	MED9 (ENSSFOG00015022670)	ENSSFOG00015022678	SOX8 (ENSSFOG00015022683)	RAB26 (ENSSFOG00015030540)	ENSSFOG00015022725	rnps1 (ENSSFOG00015022746)	ENSSFOG00015024543
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b.l #22
Asian bonytongue	MODERN SPECIES	18	ENSSFOG00015024522	ENSSFOG00015027450	atf7ip (ENSSFOG00015012687)	GRIN2B (ENSSFOG00015012813)	ENSSFOG00015025633	GSG1 (ENSSFOG00015013225)	emp1 (ENSSFOG00015030357)	ENSSFOG00015013268	ENSSFOG00015013291	ENSSFOG00015013307	pde6ha (ENSSFOG00015032155)	ENSSFOG00015013360	ENSSFOG00015027877	ddx47 (ENSSFOG00015013392)	gcat (ENSSFOG00015013409)	ENSSFOG00015013478 #22	mcm5 (ENSSFOG00015013517)	foxred2 (ENSSFOG00015013582)	ENSSFOG00015013623	S1PR5 (ENSSFOG00015024243)	spc24 (ENSSFOG00015013634)	kri1 (ENSSFOG00015013646)	CDKN2D (ENSSFOG00015032731)	ldlra (ENSSFOG00015013750)	smarca4a (ENSSFOG00015013823)	ENSSFOG00015013947	MAST1 (ENSSFOG00015013958)	rtbdn (ENSSFOG00015014018)	ENSSFOG00015014054	junbb (ENSSFOG00015009655)	HOOK2 (ENSSFOG00015014239)
Spotted gar	MODERN SPECIES	650	gtpbp1 (ENSLOCG00000011287)	ENSLOCG00000011300	ENSLOCG00000011310	ENSLOCG00000017845	ADAP1 (ENSLOCG00000011320)	ENSLOCG00000017846	CACNA1I (ENSLOCG00000011335)	grap2b (ENSLOCG00000011347)	fam83fb (ENSLOCG00000011357)	cyth4b (ENSLOCG00000011363)	SSTR5 (ENSLOCG00000011379)	ENSLOCG00000011388	ENSLOCG00000011396	CUTA (ENSLOCG00000011404)	ENSLOCG00000011409	TMEM150B (ENSLOCG00000011419) #22	ENSLOCG00000011428	ENSLOCG00000011435	PDGFB (ENSLOCG00000011442)	ncf4 (ENSLOCG00000011446)	ENSLOCG00000011456	baiap2l2b (ENSLOCG00000011463)	pla2g6 (ENSLOCG00000011469)	ENSLOCG00000017847	ENSLOCG00000011475	ENSLOCG00000011482	slc25a17 (ENSLOCG00000011492)	ENSLOCG00000011497	ENSLOCG00000011515	desi1a (ENSLOCG00000011526)	xrcc6 (ENSLOCG00000011533)
Reedfish	MODERN SPECIES	3	ENSECRG00000009279	ENSECRG00000009290	ENSECRG00000009296	ENSECRG00000009310	ENSECRG00000009359	ENSECRG00000009405	eif3d (ENSECRG00000009418)	ENSECRG00000009438	mgat3a (ENSECRG00000009456)	TAB1 (ENSECRG00000009477)	syngr1a (ENSECRG00000009497)	rpl3 (ENSECRG00000009532)	IFT27 (ENSECRG00000009574)	cacng2a (ENSECRG00000009584)	ENSECRG00000009595	tmem150b (ENSECRG00000009613) #22	ENSECRG00000009621	ENSECRG00000009632	ENSECRG00000009646	ENSECRG00000009654	ENSECRG00000009662	ENSECRG00000009668	ENSECRG00000009679	ENSECRG00000009690	ENSECRG00000009695	ENSECRG00000009703	ENSECRG00000009713	ENSECRG00000009727	ENSECRG00000009750	ENSECRG00000009759	ENSECRG00000009769
Elephant shark	MODERN SPECIES	1764			ENSCMIG00000014670	ENSCMIG00000014665	ENSCMIG00000014661	rbfox1 (ENSCMIG00000014647)	ENSCMIG00000014639	ENSCMIG00000014635	rps11 (ENSCMIG00000014614)	dhdh.2 (ENSCMIG00000014610)	ENSCMIG00000014607	ENSCMIG00000014605	PPP6R1 (ENSCMIG00000014552) #25	hspbp1 (ENSCMIG00000014502) #24	ENSCMIG00000014498 #21	ENSCMIG00000014495 #22	AP2A1 (ENSCMIG00000014079)	ENSCMIG00000013862	ENSCMIG00000013858	ENSCMIG00000013852	ENSCMIG00000013850
Cyclostomata	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b #22
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	1637																ENSPMAG00000009129 #22
Lamprey	MODERN SPECIES	377																ENSPMAG00000009204 #22	ENSPMAG00000009211	mak (ENSPMAG00000009216)
Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES	75															ENSGT01050000244965	ENSGT01030000234578.A.b.a.a ##22
Vertebrata	ANCESTRAL SPECIES	236															ENSGT01050000244965	ENSGT01030000234578.A.b.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	1103															ENSGT01050000244965.a	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Euteleostomi	ANCESTRAL SPECIES	915														ENSGT00940000156545	ENSGT01050000244965.a	ENSGT01030000234578.A.b.a.a.a ##22
Actinopterygii	ANCESTRAL SPECIES	911															ENSGT01050000244965.a	ENSGT01030000234578.A.b.a.a.a ##22
Neopterygii	ANCESTRAL SPECIES	33	ENSGT00950000182924.A.b.a.a	ENSGT00950000183054.b	ENSGT00950000183027.a.b	ENSGT00940000155571.B	ENSGT01100000263502.B.a.a.d.a.b	ENSGT01100000263502.B.a.a.d.b	ENSGT00940000154877.C	ENSGT00940000156225	ENSGT01030000234633.C.a	ENSGT00950000183175.A	ENSGT00390000000854.c.b	ENSGT00390000003133	ENSGT00940000164992	ENSGT00940000155061.a.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES	108																ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00950000183185.c.a.b	ENSGT00940000169341	ENSGT01030000235288	ENSGT00940000165336.a	ENSGT00940000164872	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00980000198953	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c
Osteoglossiformes	ANCESTRAL SPECIES	18	ENSGT00940000160819	ENSGT00390000014331	ENSGT00940000156481.a.a.a.a	ENSGT00950000182924.A.b.a.a.i	ENSGT00950000183054.b.c	ENSGT00950000183027.a.b.c.b	ENSGT00940000155571.B	ENSGT01100000263502.B.a.a.d.b	ENSGT00940000154877.C	ENSGT00940000156225	ENSGT00950000183175.A.d	ENSGT00390000000854.c.a	ENSGT00940000164992.h	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00950000183185.c.a.b	ENSGT00940000169341	ENSGT01030000235288	ENSGT00940000165336.a	ENSGT00940000164872	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00950000183002.B.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c	ENSGT00940000160317	ENSGT00940000157919.b	ENSGT00940000161868
P. kingsleyae	MODERN SPECIES	18	ENSPKIG00000011222	sec24c (ENSPKIG00000011306)	SYNPO2L (ENSPKIG00000011504)	myoz1b (ENSPKIG00000011516)	USP54 (ENSPKIG00000011549)	opn4a (ENSPKIG00000011684)	ldb3b (ENSPKIG00000011805)	bmpr1ab (ENSPKIG00000011886)	sncgb (ENSPKIG00000011985)	glud1b (ENSPKIG00000012074)	ENSPKIG00000012133	ENSPKIG00000012160	nfkb2 (ENSPKIG00000012183)	ENSPKIG00000012233	zgc:92749 (ENSPKIG00000012292)	zgc:154058 (ENSPKIG00000012318) ##22	mat1a (ENSPKIG00000012357)	ENSPKIG00000012389	ENSPKIG00000012405	ENSPKIG00000012422	SMG9 (ENSPKIG00000012446)	ENSPKIG00000012481	ENSPKIG00000012507	ENSPKIG00000012539	sfxn3 (ENSPKIG00000012573)	ENSPKIG00000012584	ENSPKIG00000012602	LZTS2 (ENSPKIG00000012642)	twnk (ENSPKIG00000012661)	mrpl43 (ENSPKIG00000012675)	SEMA4G (ENSPKIG00000012691)
Asian bonytongue	MODERN SPECIES	18	myoz1b (ENSSFOG00015003967)	USP54 (ENSSFOG00015003996)	OPN4 (ENSSFOG00015004095)	ldb3b (ENSSFOG00015004137)	bmpr1ab (ENSSFOG00015004151)	sncgb (ENSSFOG00015027622)	glud1b (ENSSFOG00015032044)	ENSSFOG00015033355	nfkb2 (ENSSFOG00015004286)	ENSSFOG00015004390	zgc:92749 (ENSSFOG00015030277)	ENSSFOG00015004436	ENSSFOG00015027197	ENSSFOG00015029808	ENSSFOG00015029757	zgc:154058 (ENSSFOG00015024448) ##22	mat1a (ENSSFOG00015003290)	ENSSFOG00015003358	ENSSFOG00015003363	sfxn3 (ENSSFOG00015030404)	pdzd7a (ENSSFOG00015003434)	LZTS2 (ENSSFOG00015025590)	twnk (ENSSFOG00015003556)	mrpl43 (ENSSFOG00015003599)	SEMA4G (ENSSFOG00015003617)	mfsd13a (ENSSFOG00015032875)	trim8b (ENSSFOG00015003680)	sfxn2 (ENSSFOG00015003684)	TIMP2 (ENSSFOG00015029701)	lgals3bp.1 (ENSSFOG00015025035)	USP36 (ENSSFOG00015025331)
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	494													ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341
Euteleosteomorpha	ANCESTRAL SPECIES	101	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c	ENSGT00940000160317
Acanthomorphata	ANCESTRAL SPECIES	12	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c	ENSGT00940000160317	ENSGT00950000182860.a.a.a.ub.b	ENSGT00390000014892	ENSGT00940000155474.o.a
Euacanthomorphacea	ANCESTRAL SPECIES	21	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000161631	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT01070000254256	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c	ENSGT00940000160317	ENSGT00950000182860.a.a.a.ub.b	ENSGT00390000014892
Percomorphaceae	ANCESTRAL SPECIES	21	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	23	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.b	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Carangaria	ANCESTRAL SPECIES	13	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
Seriola	ANCESTRAL SPECIES	1	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000155336.h.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Greater amberjack	MODERN SPECIES	27	ARHGAP44 (ENSSDUG00000008678)	ENSSDUG00000008666	ndel1a (ENSSDUG00000008645)	armc7 (ENSSDUG00000008632)	chad (ENSSDUG00000008606)	acsf2 (ENSSDUG00000008586)	ENSSDUG00000008563	SLC16A5 (ENSSDUG00000008557)	kctd2 (ENSSDUG00000008540)	tubgcp2 (ENSSDUG00000008508)	ENSSDUG00000008476	chuk (ENSSDUG00000008446)	ENSSDUG00000008314	ENSSDUG00000008278	zgc:92749 (ENSSDUG00000008267)	ENSSDUG00000008257 ##22	ENSSDUG00000008242	ghrhr2 (ENSSDUG00000008218)	ENSSDUG00000008131	KANSL1 (ENSSDUG00000008104)	CRHR1 (ENSSDUG00000008083)	ENSSDUG00000008071	FAM171A2 (ENSSDUG00000008062)	grnb (ENSSDUG00000007840)	ENSSDUG00000007780	ENSSDUG00000005984	GRB7 (ENSSDUG00000005770)	SRCIN1 (ENSSDUG00000005747)	ccr10 (ENSSDUG00000005735)	FMNL1 (ENSSDUG00000005640)	ENSSDUG00000005625
Yellowtail amberjack	MODERN SPECIES	2745	stx4 (ENSSLDG00000000166)	ARHGAP44 (ENSSLDG00000000232)	ENSSLDG00000000348	ndel1a (ENSSLDG00000000369)	armc7 (ENSSLDG00000000578)	acsf2 (ENSSLDG00000000610)	chad (ENSSLDG00000000680)	ENSSLDG00000000695	SLC16A5 (ENSSLDG00000000706)	kctd2 (ENSSLDG00000000718)	tubgcp2 (ENSSLDG00000000753)	ENSSLDG00000000826	chuk (ENSSLDG00000000860)	ENSSLDG00000000970	zgc:92749 (ENSSLDG00000000991)	ENSSLDG00000001017 ##22	ENSSLDG00000001045	ghrhr2 (ENSSLDG00000001092)	ENSSLDG00000001399	KANSL1 (ENSSLDG00000001457)
Barramundi perch	MODERN SPECIES	143	stx4 (ENSLCAG00010014631)	ARHGAP44 (ENSLCAG00010014645)	ENSLCAG00010014657	ndel1a (ENSLCAG00010014665)	armc7 (ENSLCAG00010014674)	acsf2 (ENSLCAG00010014698)	chad (ENSLCAG00010014826)	ENSLCAG00010014830	SLC16A5 (ENSLCAG00010014836)	kctd2 (ENSLCAG00010014844)	tubgcp2 (ENSLCAG00010014853)	ENSLCAG00010014860	chuk (ENSLCAG00010014923)	ENSLCAG00010015175	ENSLCAG00010015472	ENSLCAG00010015474 ##22	ENSLCAG00010015479	ghrhr2 (ENSLCAG00010015485)	ENSLCAG00010015495	ENSLCAG00010015499	KANSL1 (ENSLCAG00010015501)	CRHR1 (ENSLCAG00010015523)	FAM171A2 (ENSLCAG00010015569)	grnb (ENSLCAG00010015570)	ENSLCAG00010015573	ENSLCAG00010015581	GRB7 (ENSLCAG00010015593)	FMNL1 (ENSLCAG00010015674)	ccr10 (ENSLCAG00010015838)	ENSLCAG00010015842	ENSLCAG00010015844
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
Tongue sole	MODERN SPECIES	18	ENSCSEG00000009131	RUNDC3A (ENSCSEG00000009144)	pth3r (ENSCSEG00000009164)	KCNH2 (ENSCSEG00000009236)	ENSCSEG00000009255	ENSCSEG00000009262	erbb2 (ENSCSEG00000009269)	pgap3 (ENSCSEG00000009322)	mylpfb (ENSCSEG00000009341)	ENSCSEG00000009358	ENSCSEG00000009366	pkmyt1 (ENSCSEG00000009368)	ENSCSEG00000009385	TGFB1I1 (ENSCSEG00000009399)	ENSCSEG00000009438	ENSCSEG00000009456 ##22	MAT1A (ENSCSEG00000009470)	ghrhr2 (ENSCSEG00000009510)	ENSCSEG00000009557	KANSL1 (ENSCSEG00000009618)	CRHR1 (ENSCSEG00000009657)	FAM171A2 (ENSCSEG00000009686)	grnb (ENSCSEG00000009698)	ENSCSEG00000009747	GRB7 (ENSCSEG00000009771)	SRCIN1 (ENSCSEG00000009797)	entpd1 (ENSCSEG00000009884)	PTPRE (ENSCSEG00000009910)	CLRN3 (ENSCSEG00000010005)	foxi1 (ENSCSEG00000010013)	dock1 (ENSCSEG00000010022)
Turbot	MODERN SPECIES	9	ENSSMAG00000009817	ENSSMAG00000035582	ndel1a (ENSSMAG00000009859)	ENSSMAG00000009880	armc7 (ENSSMAG00000009904)	acsf2 (ENSSMAG00000009930)	chad (ENSSMAG00000009975)	ENSSMAG00000009981	ENSSMAG00000009996	kctd2 (ENSSMAG00000010010)	ENSSMAG00000010024	ENSSMAG00000010145	ENSSMAG00000010179	ENSSMAG00000010277	ELOVL6 (ENSSMAG00000032915)	ENSSMAG00000010307 ##22	ENSSMAG00000010343	ENSSMAG00000010405	ENSSMAG00000010492	ENSSMAG00000010506	ENSSMAG00000026589	ENSSMAG00000024219	grnb (ENSSMAG00000010720)	ENSSMAG00000010770	ENSSMAG00000010785	ENSSMAG00000026771	ENSSMAG00000010833	ccr10 (ENSSMAG00000010897)	ENSSMAG00000033593	ENSSMAG00000010919	ENSSMAG00000010925
Anabantaria	ANCESTRAL SPECIES	18	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a
Zig-zag eel	MODERN SPECIES	10	ndel1a (ENSMAMG00000007427)	ENSMAMG00000007466	chad (ENSMAMG00000024661)	acsf2 (ENSMAMG00000007535)	ENSMAMG00000007519	acsf2 (ENSMAMG00000007483)	chad (ENSMAMG00000007557)	ENSMAMG00000007570	ENSMAMG00000007579	kctd2 (ENSMAMG00000007590)	ENSMAMG00000007610	ENSMAMG00000007782	ENSMAMG00000007678	ENSMAMG00000007831	ENSMAMG00000007893	ENSMAMG00000007906 ##22	ENSMAMG00000007921	ENSMAMG00000007954	ENSMAMG00000007978	ENSMAMG00000026862	grnb (ENSMAMG00000008026)	ENSMAMG00000008064	ENSMAMG00000008079	ENSMAMG00000008095	ENSMAMG00000008207	ccr10 (ENSMAMG00000008230)	ENSMAMG00000028669	ENSMAMG00000008251	ENSMAMG00000025114	ENSMAMG00000028265	ENSMAMG00000026152
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a
Siamese fighting fish	MODERN SPECIES	9	plekhm1 (ENSBSLG00000010031)	ENSBSLG00000009946	ENSBSLG00000009676	ENSBSLG00000009658	ndel1a (ENSBSLG00000009650)	armc7 (ENSBSLG00000009642)	chad (ENSBSLG00000009636)	acsf2 (ENSBSLG00000008799)	ENSBSLG00000008778	SLC16A5 (ENSBSLG00000008775)	kctd2 (ENSBSLG00000008769)	tubgcp2 (ENSBSLG00000008737)	chuk (ENSBSLG00000008378)	ENSBSLG00000007910	ELOVL3 (ENSBSLG00000007760)	ENSBSLG00000007736 ##22	ENSBSLG00000007648	ENSBSLG00000007644	ENSBSLG00000007637	CAMK2G (ENSBSLG00000007038)	ENSBSLG00000006959	sec24c (ENSBSLG00000005561)	ENSBSLG00000005129	sncgb (ENSBSLG00000005084)	ldb3b (ENSBSLG00000004984)	OPN4 (ENSBSLG00000004922)	ENSBSLG00000026629	ENSBSLG00000026628	myoz1b (ENSBSLG00000026627)	SYNPO2L (ENSBSLG00000026626)	glud1b (ENSBSLG00000026625)
Climbing perch	MODERN SPECIES	10	ENSATEG00000008933	ENSATEG00000009008	ndel1a (ENSATEG00000009031)	acsf2 (ENSATEG00000009072)	armc7 (ENSATEG00000027928)	acsf2 (ENSATEG00000009182)	chad (ENSATEG00000009298)	ENSATEG00000009312	ENSATEG00000009322	kctd2 (ENSATEG00000025275)	ENSATEG00000009366	ENSATEG00000009430	ENSATEG00000009455	ENSATEG00000009471	ENSATEG00000009487	ENSATEG00000009501 ##22	ENSATEG00000009516	ENSATEG00000009542	ENSATEG00000009552	ENSATEG00000026255	grnb (ENSATEG00000009621)	ENSATEG00000009636	ENSATEG00000009653	ENSATEG00000009673	ENSATEG00000009703	ENSATEG00000009891	ccr10 (ENSATEG00000009925)	ENSATEG00000029323	ENSATEG00000009942	ENSATEG00000009949	ENSATEG00000028645
Eupercaria	ANCESTRAL SPECIES	10	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Tetraodontidae	ANCESTRAL SPECIES	23	ENSGT00940000157457	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a
Fugu	MODERN SPECIES		SRCAP (ENSTRUG00000011632)	stx4 (ENSTRUG00000011312)	ARHGAP44 (ENSTRUG00000011196)	ndel1a (ENSTRUG00000011075)	armc7 (ENSTRUG00000032355)	acsf2 (ENSTRUG00000010766)	chad (ENSTRUG00000011014)	ENSTRUG00000010603	SLC16A5 (ENSTRUG00000010436)	kctd2 (ENSTRUG00000022690)	tubgcp2 (ENSTRUG00000010073)	ENSTRUG00000009792	chuk (ENSTRUG00000009078)	PSD (ENSTRUG00000008695)	zgc:92749 (ENSTRUG00000008595)	ENSTRUG00000008543 ##22	ENSTRUG00000025576	ENSTRUG00000031032	KANSL1 (ENSTRUG00000008242)	CRHR1 (ENSTRUG00000008096)	FAM171A2 (ENSTRUG00000031143)	grnb (ENSTRUG00000007585)	ENSTRUG00000031093	ENSTRUG00000028911	GRB7 (ENSTRUG00000007194)	SRCIN1 (ENSTRUG00000006934)	FMNL1 (ENSTRUG00000006067)	ccr10 (ENSTRUG00000025631)	ENSTRUG00000029384	ENSTRUG00000005835	ENSTRUG00000019779
Eupecaria_A	ANCESTRAL SPECIES	22	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Ballan wrasse	MODERN SPECIES	956														ENSLBEG00000018212	zgc:92749 (ENSLBEG00000018168)	ENSLBEG00000018144 ##22
Eupecaria_B	ANCESTRAL SPECIES	22	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Perciformes	ANCESTRAL SPECIES	9	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c.d	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c.d	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
Channel bull blenny	MODERN SPECIES	10	ENSCGOG00000019238	ENSCGOG00000019231	stx4 (ENSCGOG00000019225)	ARHGAP44 (ENSCGOG00000019161)	ndel1a (ENSCGOG00000019138)	armc7 (ENSCGOG00000019136)	chad (ENSCGOG00000019129)	acsf2 (ENSCGOG00000018879)	SLC16A5 (ENSCGOG00000018870)	kctd2 (ENSCGOG00000018866)	tubgcp2 (ENSCGOG00000018863)	ENSCGOG00000018862	chuk (ENSCGOG00000018218)	ENSCGOG00000017559	zgc:92749 (ENSCGOG00000017529)	ENSCGOG00000017528 ##22	ENSCGOG00000016722	ghrhr2 (ENSCGOG00000016694)	ENSCGOG00000016670	KANSL1 (ENSCGOG00000016664)	ENSCGOG00000016663	CRHR1 (ENSCGOG00000016622)	FAM171A2 (ENSCGOG00000016607)	grnb (ENSCGOG00000016598)	ENSCGOG00000016594	ENSCGOG00000016540	GRB7 (ENSCGOG00000016530)	SRCIN1 (ENSCGOG00000016523)	FMNL1 (ENSCGOG00000016150)	ccr10 (ENSCGOG00000016135)	ENSCGOG00000016131
Pike perch	MODERN SPECIES	3	ENSSLUG00000005711	ENSSLUG00000005702	ENSSLUG00000005696	ndel1a (ENSSLUG00000005678)	armc7 (ENSSLUG00000005667)	chad (ENSSLUG00000005663)	acsf2 (ENSSLUG00000004459)	ENSSLUG00000004114	SLC16A5 (ENSSLUG00000004083)	kctd2 (ENSSLUG00000004071)	tubgcp2 (ENSSLUG00000004021)	ENSSLUG00000003974	chuk (ENSSLUG00000003917)	PSD (ENSSLUG00000003861)	zgc:92749 (ENSSLUG00000003854)	ENSSLUG00000003849 ##22	ENSSLUG00000003844	ENSSLUG00000003488	ENSSLUG00000003352	KANSL1 (ENSSLUG00000003306)	CRHR1 (ENSSLUG00000003239)	FAM171A2 (ENSSLUG00000003217)	grnb (ENSSLUG00000003177)	ENSSLUG00000020381	GRB7 (ENSSLUG00000020310)	ENSSLUG00000020295	SRCIN1 (ENSSLUG00000020265)	FMNL1 (ENSSLUG00000019870)	ccr10 (ENSSLUG00000019813)	ENSSLUG00000019810	ENSSLUG00000019805
Cottioidei	ANCESTRAL SPECIES	12	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c.d	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400
Stickleback	MODERN SPECIES	5	ARHGAP44 (ENSGACG00000004081)	ENSGACG00000004091	ndel1a (ENSGACG00000004095)	armc7 (ENSGACG00000004117)	acsf2 (ENSGACG00000004121)	chad (ENSGACG00000004134)	ENSGACG00000004139	SLC16A5 (ENSGACG00000004150)	kctd2 (ENSGACG00000004164)	tubgcp2 (ENSGACG00000004173)	ENSGACG00000004175	chuk (ENSGACG00000004179)	ENSGACG00000004204	PSD (ENSGACG00000004207)	zgc:92749 (ENSGACG00000004214)	ENSGACG00000004220 ##22	MAT1A (ENSGACG00000004225)	ENSGACG00000004243	KANSL1 (ENSGACG00000004258)	CRHR1 (ENSGACG00000004272)	FAM171A2 (ENSGACG00000004288)	grnb (ENSGACG00000004305)	ENSGACG00000004334	ENSGACG00000004343	ENSGACG00000004358	GRB7 (ENSGACG00000004362)	ENSGACG00000004377	FMNL1 (ENSGACG00000004388)	ccr10 (ENSGACG00000004402)	ENSGACG00000004411	cpped1 (ENSGACG00000004415)
Lumpfish	MODERN SPECIES	10	ENSCLMG00005005644	ENSCLMG00005005641	ENSCLMG00005005637	ENSCLMG00005005636	cep131 (ENSCLMG00005003950)	nploc4 (ENSCLMG00005003122)	pde6gb (ENSCLMG00005003084)	OXLD1 (ENSCLMG00005003082)	gprc5c (ENSCLMG00005003074)	GPR142 (ENSCLMG00005003072)	ENSCLMG00005003068	ENSCLMG00005003059	CHUK (ENSCLMG00005002340)	ENSCLMG00005002312	ELOVL3 (ENSCLMG00005002309)	ENSCLMG00005002308 ##22	ENSCLMG00005002306	ENSCLMG00005002305	KANSL1 (ENSCLMG00005002304)	CRHR1 (ENSCLMG00005002253)	FAM171A2 (ENSCLMG00005002198)	ENSCLMG00005002197	ENSCLMG00005002196	ENSCLMG00005002195	ENSCLMG00005002194	GRB7 (ENSCLMG00005002193)	SRCIN1 (ENSCLMG00005002192)	ENSCLMG00005002182	ccr10 (ENSCLMG00005002178)	ENSCLMG00005002177	ENSCLMG00005002174
Eupecaria_C	ANCESTRAL SPECIES	23	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
Gilthead seabream	MODERN SPECIES	12	ARHGAP44 (ENSSAUG00010016673)	ENSSAUG00010016665	ndel1a (ENSSAUG00010016658)	armc7 (ENSSAUG00010025471)	chad (ENSSAUG00010025469)	ENSSAUG00010025466	acsf2 (ENSSAUG00010025074)	ENSSAUG00010025044	SLC16A5 (ENSSAUG00010025043)	kctd2 (ENSSAUG00010025042)	tubgcp2 (ENSSAUG00010025037)	ENSSAUG00010025033	chuk (ENSSAUG00010025022)	ENSSAUG00010024473	zgc:92749 (ENSSAUG00010024466)	ENSSAUG00010024465 ##22	ENSSAUG00010024454	ghrhr2 (ENSSAUG00010024453)	ENSSAUG00010024452	KANSL1 (ENSSAUG00010024449)	CRHR1 (ENSSAUG00010023307)	FAM171A2 (ENSSAUG00010023288)	grnb (ENSSAUG00010023287)	ENSSAUG00010023286	ENSSAUG00010023284	GRB7 (ENSSAUG00010023281)	SRCIN1 (ENSSAUG00010023262)	FMNL1 (ENSSAUG00010021212)	ccr10 (ENSSAUG00010021155)	ENSSAUG00010021154	ENSSAUG00010021152
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	27	ENSGT00940000156201.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT01030000234575.c.a.a.a.b
European seabass	MODERN SPECIES	11	ENSDLAG00005024597	ENSDLAG00005001240	acsf2 (ENSDLAG00005001351)	armc7 (ENSDLAG00005001288)	chad (ENSDLAG00005027941)	ENSDLAG00005001660	ENSDLAG00005001686	kctd2 (ENSDLAG00005027650)	TUBGCP2 (ENSDLAG00005001711)	ENSDLAG00005001793	ENSDLAG00005001836	ENSDLAG00005001991	ENSDLAG00005027391	ENSDLAG00005002289	ENSDLAG00005027928	ENSDLAG00005002164 ##22	ENSDLAG00005002171	ENSDLAG00005002216	ENSDLAG00005002239	ENSDLAG00005002695	ENSDLAG00005027422	grnb (ENSDLAG00005005875)	ENSDLAG00005005934	ENSDLAG00005029537	ENSDLAG00005005980	ENSDLAG00005006070	ENSDLAG00005006315	ccr10 (ENSDLAG00005010705)	ENSDLAG00005010712	ENSDLAG00005028436	ENSDLAG00005026661
Large yellow croaker	MODERN SPECIES	488	ENSLCRG00005016197	nploc4 (ENSLCRG00005016208)	ENSLCRG00005016525	ENSLCRG00005016527	cep131 (ENSLCRG00005016540)	ENSLCRG00005017275	ENSLCRG00005017279	ENSLCRG00005017280	ENSLCRG00005017281	ENSLCRG00005017282	AATK (ENSLCRG00005017283)	BAIAP2 (ENSLCRG00005017285)	CHMP6 (ENSLCRG00005017289)	ENSLCRG00005017293	ELOVL6 (ENSLCRG00005017296)	ENSLCRG00005017298 ##22	ENSLCRG00005017300	ENSLCRG00005017314	KANSL1 (ENSLCRG00005017316)	CRHR1 (ENSLCRG00005017330)	FAM171A2 (ENSLCRG00005019394)	grnb (ENSLCRG00005019396)	ENSLCRG00005019399	ENSLCRG00005019402	GRB7 (ENSLCRG00005019403)	SRCIN1 (ENSLCRG00005019405)	FMNL1 (ENSLCRG00005019414)	ccr10 (ENSLCRG00005019675)	ENSLCRG00005019676	ENSLCRG00005019677	ENSLCRG00005019678
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.b	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400
Oryzias	ANCESTRAL SPECIES	11	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s	ENSGT00950000182979.a.b.b.b.a.c	ENSGT00940000154744.a.b	ENSGT00390000014667
Oryzias_a	ANCESTRAL SPECIES	52	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i
Japanese Medaka HdrR	MODERN SPECIES	10	ENSORLG00000012549	ENSORLG00000029788	ndel1a (ENSORLG00000012578)	acsf2 (ENSORLG00000022504)	armc7 (ENSORLG00000027569)	chad (ENSORLG00000019995)	ENSORLG00000012606	SLC16A5 (ENSORLG00000012620)	ENSORLG00000029790	kctd2 (ENSORLG00000024589)	tubgcp2 (ENSORLG00000012648)	ENSORLG00000012691	chuk (ENSORLG00000012786)	ENSORLG00000012812	ELOVL6 (ENSORLG00000022514)	ENSORLG00000029233 ##22	ENSORLG00000012858	ENSORLG00000012867	ENSORLG00000012888	ENSORLG00000012904	ENSORLG00000012927	ENSORLG00000021791	mettl9 (ENSORLG00000012946)	kdelr2b (ENSORLG00000012960)	ENSORLG00000023791	wdr45b (ENSORLG00000012984)	ENSORLG00000012992	adprm (ENSORLG00000023410)	map2k4b (ENSORLG00000013013)	MYOCD (ENSORLG00000013047)	ENSORLG00000022792
Chinese medaka	MODERN SPECIES	216	MRM1 (ENSOSIG00000008533)	ENSOSIG00000008531	stx4 (ENSOSIG00000008477)	ENSOSIG00000006408	ndel1a (ENSOSIG00000006323)	armc7 (ENSOSIG00000006319)	chad (ENSOSIG00000006316)	acsf2 (ENSOSIG00000004381)	ENSOSIG00000004322	SLC16A5 (ENSOSIG00000004317)	kctd2 (ENSOSIG00000004309)	tubgcp2 (ENSOSIG00000003633)	chuk (ENSOSIG00000020753)	ENSOSIG00000020734	ENSOSIG00000020728	ENSOSIG00000020717 ##22	ENSOSIG00000020665	ENSOSIG00000020657	ENSOSIG00000020655	ENSOSIG00000020650	CRHR1 (ENSOSIG00000019281)	ENSOSIG00000019197	mettl9 (ENSOSIG00000019194)	kdelr2b (ENSOSIG00000019190)	ENSOSIG00000019188	wdr45b (ENSOSIG00000019160)
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s	ENSGT00950000182979.a.b.b.b.a.c	ENSGT00940000154744.a.b	ENSGT00390000014667
Indian medaka	MODERN SPECIES	17	ARHGAP44 (ENSOMEG00000003370)	ENSOMEG00000003345	ndel1a (ENSOMEG00000003328)	armc7 (ENSOMEG00000003319)	acsf2 (ENSOMEG00000003307)	chad (ENSOMEG00000003273)	ENSOMEG00000003251	SLC16A5 (ENSOMEG00000003195)	kctd2 (ENSOMEG00000003178)	tubgcp2 (ENSOMEG00000003163)	ENSOMEG00000003117	chuk (ENSOMEG00000003086)	ENSOMEG00000003008	ENSOMEG00000002977	ENSOMEG00000002975	ENSOMEG00000002967 ##22	ENSOMEG00000002953	ENSOMEG00000002899	KANSL1 (ENSOMEG00000002820)	CRHR1 (ENSOMEG00000002806)	ENSOMEG00000002789	mettl9 (ENSOMEG00000002750)	kdelr2b (ENSOMEG00000002743)	ENSOMEG00000002735	wdr45b (ENSOMEG00000002726)	foxk2a (ENSOMEG00000002711)	mtr (ENSOMEG00000002695)	ENSOMEG00000002662	ENSOMEG00000002604	FAM171A2 (ENSOMEG00000002596)	grnb (ENSOMEG00000002589)
Javanese ricefish	MODERN SPECIES	10	ENSOJAG00000017048	stx4 (ENSOJAG00000017983)	ENSOJAG00000018012	ndel1a (ENSOJAG00000018085)	armc7 (ENSOJAG00000018103)	acsf2 (ENSOJAG00000018207)	chad (ENSOJAG00000019037)	SLC16A5 (ENSOJAG00000019136)	kctd2 (ENSOJAG00000019176)	tubgcp2 (ENSOJAG00000019221)	ENSOJAG00000019303	ENSOJAG00000019324	chuk (ENSOJAG00000019344)	ENSOJAG00000019885	ELOVL6 (ENSOJAG00000020561)	ENSOJAG00000020565 ##22	ENSOJAG00000020573	ENSOJAG00000020611	KANSL1 (ENSOJAG00000020657)	CRHR1 (ENSOJAG00000020804)	ENSOJAG00000021722	mettl9 (ENSOJAG00000021755)	kdelr2b (ENSOJAG00000021758)	ENSOJAG00000021761	wdr45b (ENSOJAG00000021767)	foxk2a (ENSOJAG00000021787)	ENSOJAG00000021798	SHISA6 (ENSOJAG00000021815)	ENSOJAG00000021836	map2k4b (ENSOJAG00000021882)	adprm (ENSOJAG00000022173)
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00980000200843	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a
Cyprinodontoidei	ANCESTRAL SPECIES	17	ENSGT00390000003070.a.b.b	ENSGT00390000017548.b.b	ENSGT00950000182990.b	ENSGT00940000161116.w.b	ENSGT00390000004428.a.b	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00390000017554	ENSGT00940000155035.n.b	ENSGT00940000156525	ENSGT00940000158286.e.b	ENSGT00950000183091.A.a	ENSGT00730000114509	ENSGT00950000183001.a.a.c	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000158045.a
NAME_4	ANCESTRAL SPECIES	22	ENSGT00390000003070.a.b.b	ENSGT00390000017548.b.b	ENSGT00950000182990.b	ENSGT00940000161116.w.b	ENSGT00390000004428.a.b	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00390000017554	ENSGT00940000155035.n.b	ENSGT00940000156525	ENSGT00940000158286.e.b	ENSGT00950000183091.A.a.t	ENSGT00950000183001.a.a.c	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000158045.a	ENSGT00940000154430.c.a
Sheepshead minnow	MODERN SPECIES	398	FADS6 (ENSCVAG00000016321)	trim16 (ENSCVAG00000016329)	tvp23b (ENSCVAG00000016340)	exoc7 (ENSCVAG00000016511)	galr2a (ENSCVAG00000016530)	ENSCVAG00000016539	KCNJ16 (ENSCVAG00000016544)	kcnj2a (ENSCVAG00000016584)	map2k6 (ENSCVAG00000016632)	BTBD17 (ENSCVAG00000016643)	GPR142 (ENSCVAG00000016678)	gprc5c (ENSCVAG00000016688)	ENSCVAG00000016691	pde6gb (ENSCVAG00000016703)	ENSCVAG00000016724	ENSCVAG00000016730 ##22	PSTK (ENSCVAG00000016735)	IKZF5 (ENSCVAG00000016757)	ACADSB (ENSCVAG00000016804)	HMX3 (ENSCVAG00000016810)	bub3 (ENSCVAG00000016815)	GPR26 (ENSCVAG00000016830)	CPXM2 (ENSCVAG00000016846)	CHST15 (ENSCVAG00000016878)	oat (ENSCVAG00000016925)	lhpp (ENSCVAG00000016958)	fam53b (ENSCVAG00000016970)	hpdl (ENSCVAG00000016979)	ENSCVAG00000017030	CTBP2 (ENSCVAG00000017073)
Mummichog	MODERN SPECIES	2198	HID1 (ENSFHEG00000010668)	USH1G (ENSFHEG00000010681)	FADS6 (ENSFHEG00000010703)	trim16 (ENSFHEG00000010712)	tvp23b (ENSFHEG00000010736)	exoc7 (ENSFHEG00000010965)	galr2a (ENSFHEG00000010996)	KCNJ16 (ENSFHEG00000011006)	kcnj2a (ENSFHEG00000011010)	map2k6 (ENSFHEG00000011061)	BTBD17 (ENSFHEG00000011088)	GPR142 (ENSFHEG00000011122)	gprc5c (ENSFHEG00000011143)	pde6gb (ENSFHEG00000011161)	zgc:92749 (ENSFHEG00000011166)	ENSFHEG00000011216 ##22	PSTK (ENSFHEG00000011224)	IKZF5 (ENSFHEG00000011230)	ACADSB (ENSFHEG00000011258)	HMX3 (ENSFHEG00000011279)	bub3 (ENSFHEG00000011308)	GPR26 (ENSFHEG00000011333)	CPXM2 (ENSFHEG00000011390)	CHST15 (ENSFHEG00000011449)	oat (ENSFHEG00000011494)	lhpp (ENSFHEG00000011529)	fam53b (ENSFHEG00000011563)	hpdl (ENSFHEG00000011584)	ENSFHEG00000011604	ZRANB1 (ENSFHEG00000011656)	CTBP2 (ENSFHEG00000011695)
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00390000003070.a.b.b	ENSGT00390000017548.b.b	ENSGT00950000182990.b	ENSGT00940000161116.w.b	ENSGT00390000004428.a.b	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00390000017554	ENSGT00940000155035.n.b	ENSGT00940000156525	ENSGT00940000158286.e.b	ENSGT00950000183091.A.a	ENSGT00730000114509	ENSGT00950000183001.a.a.c	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a
Poecilia	ANCESTRAL SPECIES	15	ENSGT00390000003070.a.b.b	ENSGT00390000017548.b.b	ENSGT00950000182990.b	ENSGT00940000161116.w.b	ENSGT00390000004428.a.b	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00390000017554	ENSGT00940000155035.n.b	ENSGT00940000156525	ENSGT00940000158286.e.b	ENSGT00950000183091.A.a	ENSGT00730000114509	ENSGT00950000183001.a.a.c	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a
NAME_6	ANCESTRAL SPECIES		ENSGT00390000003070.a.b.b	ENSGT00390000017548.b.b	ENSGT00950000182990.b	ENSGT00940000161116.w.b	ENSGT00390000004428.a.b	ENSGT00390000003595	ENSGT01080000257365.a.d	ENSGT01030000234586.B.a.a.a	ENSGT00940000157836.b	ENSGT00950000182983.A.a.a.b	ENSGT00940000160948	ENSGT00950000182961.a.a.c	ENSGT00390000003596	ENSGT00390000013260.B	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00390000017554	ENSGT00940000155035.n.b	ENSGT00940000156525	ENSGT00940000158286.e.b	ENSGT00950000183091.A.a	ENSGT00730000114509	ENSGT00950000183001.a.a.c	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000169101	ENSGT00940000154430.c.a
Amazon molly	MODERN SPECIES	259	galr2a (ENSPFOG00000012252)	KCNJ16 (ENSPFOG00000020441)	kcnj2a (ENSPFOG00000020440)	KCNJ16 (ENSPFOG00000020439)	kcnj2a (ENSPFOG00000020438)	kcnj2a (ENSPFOG00000020437)	BTBD17 (ENSPFOG00000012121)	GPR142 (ENSPFOG00000012115)	map2k6 (ENSPFOG00000011774)	BTBD17 (ENSPFOG00000011760)	GPR142 (ENSPFOG00000011754)	gprc5c (ENSPFOG00000011734)	ENSPFOG00000020436	pde6gb (ENSPFOG00000011732)	ENSPFOG00000011711	ENSPFOG00000011678 ##22	PSTK (ENSPFOG00000011595)	IKZF5 (ENSPFOG00000011572)	ACADSB (ENSPFOG00000011496)	HMX3 (ENSPFOG00000011482)	bub3 (ENSPFOG00000011421)	ENSPFOG00000022326	GPR26 (ENSPFOG00000011400)	CPXM2 (ENSPFOG00000011220)	CHST15 (ENSPFOG00000011179)	oat (ENSPFOG00000011095)	lhpp (ENSPFOG00000011062)	fam53b (ENSPFOG00000011033)	hpdl (ENSPFOG00000010991)	ENSPFOG00000010897	ENSPFOG00000010606
Sailfin molly	MODERN SPECIES	471								kcnj2a (ENSPLAG00000008193)	map2k6 (ENSPLAG00000008209)	BTBD17 (ENSPLAG00000008223)	GPR142 (ENSPLAG00000008253)	gprc5c (ENSPLAG00000008262)	ENSPLAG00000008267	pde6gb (ENSPLAG00000008588)	ENSPLAG00000008637	ENSPLAG00000008654 ##22	PSTK (ENSPLAG00000008667)	IKZF5 (ENSPLAG00000008675)	ACADSB (ENSPLAG00000008705)	HMX3 (ENSPLAG00000008717)	bub3 (ENSPLAG00000008730)	GPR26 (ENSPLAG00000008754)	CPXM2 (ENSPLAG00000008785)	CHST15 (ENSPLAG00000008815)
Guppy	MODERN SPECIES	449	USH1G (ENSPREG00000008338)	FADS6 (ENSPREG00000008312)	ENSPREG00000008293	tvp23b (ENSPREG00000007955)	exoc7 (ENSPREG00000007649)	galr2a (ENSPREG00000007578)	KCNJ16 (ENSPREG00000007555)	kcnj2a (ENSPREG00000007547)	map2k6 (ENSPREG00000007511)	BTBD17 (ENSPREG00000007493)	GPR142 (ENSPREG00000007479)	gprc5c (ENSPREG00000007467)	ENSPREG00000007448	pde6gb (ENSPREG00000007437)	ENSPREG00000007371	ENSPREG00000007351 ##22	PSTK (ENSPREG00000007335)	IKZF5 (ENSPREG00000007320)	ACADSB (ENSPREG00000007280)	HMX3 (ENSPREG00000007254)	bub3 (ENSPREG00000007234)	GPR26 (ENSPREG00000007214)	CPXM2 (ENSPREG00000007148)	CHST15 (ENSPREG00000007056)	oat (ENSPREG00000006997)	lhpp (ENSPREG00000006958)	fam53b (ENSPREG00000006943)	hpdl (ENSPREG00000006930)	ENSPREG00000006907	ENSPREG00000006829	mmp21 (ENSPREG00000006771)
Platyfish	MODERN SPECIES	1	USH1G (ENSXMAG00000016823)	FADS6 (ENSXMAG00000016813)	trim16 (ENSXMAG00000023407)	tvp23b (ENSXMAG00000016778)	exoc7 (ENSXMAG00000016748)	galr2a (ENSXMAG00000016747)	KCNJ16 (ENSXMAG00000016746)	kcnj2a (ENSXMAG00000019862)	map2k6 (ENSXMAG00000016710)	BTBD17 (ENSXMAG00000016708)	GPR142 (ENSXMAG00000022856)	gprc5c (ENSXMAG00000016702)	ENSXMAG00000016697	pde6gb (ENSXMAG00000016693)	ENSXMAG00000021238	ENSXMAG00000016672 ##22	PSTK (ENSXMAG00000023548)	IKZF5 (ENSXMAG00000016661)	ACADSB (ENSXMAG00000016640)	HMX3 (ENSXMAG00000028551)	bub3 (ENSXMAG00000016612)	GPR26 (ENSXMAG00000016606)	CPXM2 (ENSXMAG00000016574)	CHST15 (ENSXMAG00000016569)	oat (ENSXMAG00000016554)	lhpp (ENSXMAG00000016538)	fam53b (ENSXMAG00000016533)	hpdl (ENSXMAG00000000449)	ENSXMAG00000029327	ENSXMAG00000019860	mmp21 (ENSXMAG00000016521)
Aplocheiloidei	ANCESTRAL SPECIES	4	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400	ENSGT01030000234592.A.b.b.b.a	ENSGT00940000164286.j.a.a.a
Mangrove rivulus	MODERN SPECIES	727															zgc:92749 (ENSKMAG00000007420)	ENSKMAG00000007388 ##22	ENSKMAG00000007277	KANSL1 (ENSKMAG00000007218)
Turquoise killifish	MODERN SPECIES	1621	ENSNFUG00015025072	NPLOC4 (ENSNFUG00015025062)	pde6gb (ENSNFUG00015025061)	OXLD1 (ENSNFUG00015025060)	gprc5c (ENSNFUG00015025058)	GPR142 (ENSNFUG00015025056)	BTBD17 (ENSNFUG00015025055)	map2k6 (ENSNFUG00015025054)	ENSNFUG00015025052	KCNJ2 (ENSNFUG00015025050)	KCNJ16 (ENSNFUG00015025047)	GALR3 (ENSNFUG00015025044)	EXOC7 (ENSNFUG00015024816)	tvp23b (ENSNFUG00015024728)	trim16 (ENSNFUG00015024725)	ENSNFUG00015024722 ##22	ENSNFUG00015024713	KANSL1 (ENSNFUG00015024706)	CRHR1 (ENSNFUG00015024657)	FAM171A2 (ENSNFUG00015024640)	ENSNFUG00015024606	ENSNFUG00015024580	ARF1L (ENSNFUG00015024559)	GRB7 (ENSNFUG00015024554)	ENSNFUG00015024321	SRCIN1 (ENSNFUG00015024298)	ENSNFUG00015024293	ENSNFUG00015024291	ccr10 (ENSNFUG00015024290)	ENSNFUG00015024288	Nfu_g_1_000811 (ENSNFUG00015024287)
Ovalentaria_B	ANCESTRAL SPECIES	21	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.b	ENSGT00980000201950	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a
Cichlidae	ANCESTRAL SPECIES	15	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.b	ENSGT00980000201950	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a
Midas cichlid	MODERN SPECIES	358							ENSACIG00000013470	ENSACIG00000013462	tubgcp2 (ENSACIG00000013433)	ENSACIG00000013380	ENSACIG00000013369	chuk (ENSACIG00000013304)	ENSACIG00000013285	ENSACIG00000013263	zgc:92749 (ENSACIG00000013253)	ENSACIG00000013239 ##22	ENSACIG00000013217	ghrhr2 (ENSACIG00000013192)	ENSACIG00000013174	KANSL1 (ENSACIG00000013150)	CRHR1 (ENSACIG00000013100)	FAM171A2 (ENSACIG00000013076)	ENSACIG00000013067	grnb (ENSACIG00000012938)	ENSACIG00000012912	GRB7 (ENSACIG00000012887)	SRCIN1 (ENSACIG00000012804)	ENSACIG00000012765	ccr10 (ENSACIG00000012757)	ENSACIG00000012749	ENSACIG00000012739
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00950000182996.b.b.d.a.a	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400
Nile tilapia	MODERN SPECIES	20	ENSONIG00000042359	ARHGAP44 (ENSONIG00000018187)	ENSONIG00000018186	ndel1a (ENSONIG00000018181)	armc7 (ENSONIG00000031451)	chad (ENSONIG00000018179)	acsf2 (ENSONIG00000018174)	ENSONIG00000018168	SLC16A5 (ENSONIG00000032659)	kctd2 (ENSONIG00000018163)	tubgcp2 (ENSONIG00000018159)	ENSONIG00000018157	chuk (ENSONIG00000018146)	ENSONIG00000018143	zgc:92749 (ENSONIG00000039199)	ENSONIG00000035850 ##22	ENSONIG00000040716	ENSONIG00000018138	ENSONIG00000018136	KANSL1 (ENSONIG00000018135)	CRHR1 (ENSONIG00000038106)	FAM171A2 (ENSONIG00000018126)	grnb (ENSONIG00000018119)	ENSONIG00000018118	ENSONIG00000018116	ENSONIG00000035868	ENSONIG00000041559	GRB7 (ENSONIG00000018112)	SRCIN1 (ENSONIG00000018109)	FMNL1 (ENSONIG00000018104)	ccr10 (ENSONIG00000038579)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00950000182996.b.b.d.a.a	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400
Haplochromini	ANCESTRAL SPECIES	17	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00950000182996.b.b.d.a.a	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400.c
Burton s mouthbrooder	MODERN SPECIES	274	stx4 (ENSHBUG00000004308)	ARHGAP44 (ENSHBUG00000004300)	ENSHBUG00000004251	ndel1a (ENSHBUG00000004221)	acsf2 (ENSHBUG00000004155)	armc7 (ENSHBUG00000004124)	chad (ENSHBUG00000004113)	ENSHBUG00000004091	SLC16A5 (ENSHBUG00000004078)	kctd2 (ENSHBUG00000004065)	tubgcp2 (ENSHBUG00000004036)	ENSHBUG00000003987	chuk (ENSHBUG00000003941)	ENSHBUG00000003897	zgc:92749 (ENSHBUG00000003868)	ENSHBUG00000003844 ##22	ENSHBUG00000000955	ENSHBUG00000003789	ENSHBUG00000003772	KANSL1 (ENSHBUG00000003739)	ENSHBUG00000003724	FAM171A2 (ENSHBUG00000003681)	grnb (ENSHBUG00000003674)	ENSHBUG00000003654	GRB7 (ENSHBUG00000003637)	SRCIN1 (ENSHBUG00000003567)	FMNL1 (ENSHBUG00000000076)	ccr10 (ENSHBUG00000003468)	ENSHBUG00000003463	ENSHBUG00000003450	ENSHBUG00000003437
Haplochromini_A	ANCESTRAL SPECIES	16	ENSGT00940000157457	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400.c	ENSGT00940000165400.d
P. nyererei	MODERN SPECIES	312	ENSPNYG00000000489	stx4 (ENSPNYG00000000473)	ARHGAP44 (ENSPNYG00000000451)	ndel1a (ENSPNYG00000000436)	armc7 (ENSPNYG00000000425)	chad (ENSPNYG00000000417)	acsf2 (ENSPNYG00000000376)	ENSPNYG00000000358	SLC16A5 (ENSPNYG00000000355)	ENSPNYG00000000350	tubgcp2 (ENSPNYG00000000335)	ENSPNYG00000020916	chuk (ENSPNYG00000020836)	ENSPNYG00000020806	zgc:92749 (ENSPNYG00000020784)	ENSPNYG00000020758 ##22	ENSPNYG00000020735	ENSPNYG00000020674	KANSL1 (ENSPNYG00000020644)	CRHR1 (ENSPNYG00000020616)	FAM171A2 (ENSPNYG00000020605)	grnb (ENSPNYG00000020588)	ENSPNYG00000020567	ENSPNYG00000020555	GRB7 (ENSPNYG00000020529)	SRCIN1 (ENSPNYG00000020443)	ENSPNYG00000020402	ccr10 (ENSPNYG00000020391)	ENSPNYG00000020379	ENSPNYG00000020368	ENSPNYG00000020362
Haplochromini_B	ANCESTRAL SPECIES	15	ENSGT00940000157457	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00940000158710	ENSGT00940000157961.A	ENSGT00940000156292.g.a	ENSGT01030000234667.a.a.a.a.a	ENSGT00940000168205	ENSGT00940000165400.c	ENSGT00940000165400.d
Zebra mbuna	MODERN SPECIES	1111	ENSMZEG00005008455	stx4 (ENSMZEG00005008506)	ARHGAP44 (ENSMZEG00005008519)	ndel1a (ENSMZEG00005008543)	armc7 (ENSMZEG00005008569)	acsf2 (ENSMZEG00005008586)	chad (ENSMZEG00005008601)	ENSMZEG00005008608	SLC16A5 (ENSMZEG00005008629)	kctd2 (ENSMZEG00005008638)	tubgcp2 (ENSMZEG00005008651)	ENSMZEG00005008699	chuk (ENSMZEG00005008726)	ENSMZEG00005008792	zgc:92749 (ENSMZEG00005008820)	ENSMZEG00005008836 ##22	ENSMZEG00005008856	ENSMZEG00005008879	KANSL1 (ENSMZEG00005008930)	ENSMZEG00005008950	FAM171A2 (ENSMZEG00005008985)	grnb (ENSMZEG00005009003)	ENSMZEG00005009018	ENSMZEG00005009037	GRB7 (ENSMZEG00005009054)	ENSMZEG00005009102	FMNL1 (ENSMZEG00005009159)	ccr10 (ENSMZEG00005009201)	ENSMZEG00005009207	ENSMZEG00005009220	ENSMZEG00005009244
Eastern happy	MODERN SPECIES	20	ENSACLG00000023636	stx4 (ENSACLG00000023626)	ARHGAP44 (ENSACLG00000023588)	ndel1a (ENSACLG00000023523)	armc7 (ENSACLG00000023508)	chad (ENSACLG00000023498)	acsf2 (ENSACLG00000023463)	ENSACLG00000023109	SLC16A5 (ENSACLG00000023090)	kctd2 (ENSACLG00000023069)	tubgcp2 (ENSACLG00000023020)	ENSACLG00000023000	chuk (ENSACLG00000022851)	ENSACLG00000022794	zgc:92749 (ENSACLG00000022773)	ENSACLG00000022732 ##22	ENSACLG00000022689	ENSACLG00000022670	ENSACLG00000022654	ENSACLG00000022424	KANSL1 (ENSACLG00000022326)	CRHR1 (ENSACLG00000022257)	FAM171A2 (ENSACLG00000022238)	grnb (ENSACLG00000022188)	ENSACLG00000022154	ENSACLG00000022124	GRB7 (ENSACLG00000022097)	ENSACLG00000022094	SRCIN1 (ENSACLG00000022001)	FMNL1 (ENSACLG00000021859)	ccr10 (ENSACLG00000021839)
Lyretail cichlid	MODERN SPECIES	317	stx4 (ENSNBRG00000023557)	ARHGAP44 (ENSNBRG00000023562)	ndel1a (ENSNBRG00000023570)	armc7 (ENSNBRG00000023573)	acsf2 (ENSNBRG00000023583)	ENSNBRG00000023620	ENSNBRG00000023626	SLC16A5 (ENSNBRG00000023632)	kctd2 (ENSNBRG00000023638)	tubgcp2 (ENSNBRG00000023649)	ADAM8 (ENSNBRG00000023680)	chuk (ENSNBRG00000023728)	ENSNBRG00000023736	ENSNBRG00000023743	ENSNBRG00000023749	ENSNBRG00000023759 ##22	ENSNBRG00000023760	ENSNBRG00000023768	KANSL1 (ENSNBRG00000023776)	ENSNBRG00000023786	FAM171A2 (ENSNBRG00000023792)	ENSNBRG00000023796	ENSNBRG00000023803	GRB7 (ENSNBRG00000023809)	srcin1b (ENSNBRG00000023816)	ENSNBRG00000023824	ccr10 (ENSNBRG00000023831)	ENSNBRG00000023835	ENSNBRG00000023838	ENSNBRG00000023841	ENSNBRG00000023843
Pomacentridae	ANCESTRAL SPECIES	41	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00510000050089.a.b.d	ENSGT00730000111991	ENSGT00940000176991	ENSGT00940000167352	ENSGT00940000177267	ENSGT00940000171531
Bicolor damselfish	MODERN SPECIES	1132												chuk (ENSSPAG00000000587)	ENSSPAG00000000553	ENSSPAG00000000507	zgc:92749 (ENSSPAG00000000486)	ENSSPAG00000000475 ##22	ENSSPAG00000000447	ghrhr2 (ENSSPAG00000000387)	ENSSPAG00000000327
Pomacentridae_A	ANCESTRAL SPECIES	39	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00510000050089.a.b.d	ENSGT00730000111991	ENSGT00940000176991	ENSGT00940000167352	ENSGT00940000171531	ENSGT00940000177233
Amphiprion	ANCESTRAL SPECIES	59	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000161826.C	ENSGT00940000156830.a	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000180881	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000166534	ENSGT00940000155494.j	ENSGT00530000063688.b.nb.a	ENSGT00940000158410.g.b	ENSGT00950000183184.b.a	ENSGT00470000042293.a.b.a.b	ENSGT00940000156497.b	ENSGT00950000183080.a.b.b.a.b	ENSGT00510000050089.a.b.d	ENSGT00730000111991	ENSGT00940000176991	ENSGT00940000167352	ENSGT00940000171531	ENSGT00940000177233
Clown anemonefish	MODERN SPECIES	2039										ENSAOCG00000004199	pvalb6 (ENSAOCG00000004168)	ENSAOCG00000004150	ENSAOCG00000004141	ENSAOCG00000004134	zgc:92749 (ENSAOCG00000004117)	ENSAOCG00000004107 ##22	ENSAOCG00000004096	ghrhr2 (ENSAOCG00000004071)	ENSAOCG00000000138
Orange clownfish	MODERN SPECIES	10	ARHGAP44 (ENSAPEG00000004271)	ndel1a (ENSAPEG00000004242)	armc7 (ENSAPEG00000004221)	chad (ENSAPEG00000004207)	acsf2 (ENSAPEG00000004140)	ENSAPEG00000004118	snf8 (ENSAPEG00000004082)	SLC16A5 (ENSAPEG00000004055)	ENSAPEG00000004039	kctd2 (ENSAPEG00000004002)	tubgcp2 (ENSAPEG00000003938)	ENSAPEG00000003909	chuk (ENSAPEG00000003851)	PSD (ENSAPEG00000003822)	zgc:92749 (ENSAPEG00000003813)	ENSAPEG00000003796 ##22	ENSAPEG00000003760	ghrhr2 (ENSAPEG00000003716)	ENSAPEG00000003673	KANSL1 (ENSAPEG00000003654)	ENSAPEG00000003591	CRHR1 (ENSAPEG00000003526)	FAM171A2 (ENSAPEG00000003506)	grnb (ENSAPEG00000003470)	ENSAPEG00000003398	ENSAPEG00000003390	ENSAPEG00000003238	ENSAPEG00000003080	ENSAPEG00000003069	ENSAPEG00000003064	scn4aa (ENSAPEG00000002925)
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	2882																ENSAPOG00000003582 ##22	ENSAPOG00000003559	ghrhr2 (ENSAPOG00000003528)
Spiny chromis	MODERN SPECIES	2176														ENSAPOG00000012362	zgc:92749 (ENSAPOG00000012387)	ENSAPOG00000012416 ##22
Pinecone sodierfish	MODERN SPECIES	10	stx4 (ENSMMDG00005004908)	ARHGAP44 (ENSMMDG00005004905)	ndel1a (ENSMMDG00005004902)	armc7 (ENSMMDG00005004900)	chad (ENSMMDG00005004897)	acsf2 (ENSMMDG00005002503)	ENSMMDG00005021897	SLC16A5 (ENSMMDG00005021893)	kctd2 (ENSMMDG00005021892)	tubgcp2 (ENSMMDG00005021869)	ENSMMDG00005021859	chuk (ENSMMDG00005021795)	ENSMMDG00005021775	ENSMMDG00005021771	zgc:92749 (ENSMMDG00005021765)	ENSMMDG00005021763 ##22	ENSMMDG00005021754	ENSMMDG00005021751	selenou1b (ENSMMDG00005021749)	ENSMMDG00005021748	ENSMMDG00005021747	PDZD7 (ENSMMDG00005021744)	LZTS2 (ENSMMDG00005021742)	twnk (ENSMMDG00005021739)	mrpl43 (ENSMMDG00005021737)	SEMA4G (ENSMMDG00005021733)	mfsd13a (ENSMMDG00005021661)	ENSMMDG00005021650	vps25 (ENSMMDG00005021642)	ENSMMDG00005021639	coa3a (ENSMMDG00005021636)
Cod	MODERN SPECIES	9	ENSGMOG00000017548	ENSGMOG00000017583	CDR2 (ENSGMOG00000028653)	ENSGMOG00000017621	EEF2K (ENSGMOG00000017645)	ENSGMOG00000017676	ENSGMOG00000017693	ENSGMOG00000017699	ENSGMOG00000002993	ENSGMOG00000003014	ENSGMOG00000003024	ENSGMOG00000003064	ENSGMOG00000003103	ENSGMOG00000003141	ENSGMOG00000013117	ENSGMOG00000006833 ##22	ENSGMOG00000010652	ENSGMOG00000028252	ENSGMOG00000010659	trim16 (ENSGMOG00000010687)	FADS6 (ENSGMOG00000010702)	USH1G (ENSGMOG00000010716)	OTOP3 (ENSGMOG00000010723)	HID1 (ENSGMOG00000010734)	ENSGMOG00000010751	VCL (ENSGMOG00000000184)	ADK (ENSGMOG00000000194)	KAT6B (ENSGMOG00000000202)	ENSGMOG00000000213	ENSGMOG00000000215	DUSP13 (ENSGMOG00000034188)
Protacanthopterygii	ANCESTRAL SPECIES	100	ENSGT01030000234627.a.b.b	ENSGT00940000157296.o.a	ENSGT00390000005565	ENSGT00390000000111.a.n	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C	ENSGT00940000166090	ENSGT00940000159666.c	ENSGT00940000158336	ENSGT00940000156697	ENSGT00940000158585.g.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375	ENSGT00940000157186.c	ENSGT00940000160317
Salmoninae	ANCESTRAL SPECIES	23	ENSGT01030000234627.a.b.b.f	ENSGT00940000157296.o.a.g	ENSGT00390000005565	ENSGT00390000000111.a.n.f	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C.cb.a	ENSGT00940000166090	ENSGT00940000159666.c.h	ENSGT00940000158336.fb	ENSGT00940000156697.i.b	ENSGT00940000158585.g.b.d	ENSGT00950000182937.A.a.o.b	ENSGT00940000155061.a.b.k.b.x	ENSGT01050000244965.a.a.g	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a.c	ENSGT00390000004495.k	ENSGT00390000015375	ENSGT00940000157186.c.d	ENSGT00940000160317.g	ENSGT00940000155111.vb.a	ENSGT00940000157744.d.f	ENSGT00650000094974.b.d
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT01030000234627.a.b.b.f	ENSGT00940000157296.o.a.g	ENSGT00390000005565	ENSGT00390000000111.a.n.f	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C.cb.a	ENSGT00940000166090	ENSGT00940000159666.c.h	ENSGT00940000158336.fb	ENSGT00940000156697.i.b	ENSGT00940000158585.g.b.d	ENSGT00950000182937.A.a.o.b	ENSGT00940000155061.a.b.k.b.x	ENSGT01050000244965.a.a.g	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT01070000254256.c	ENSGT00940000154078.a.a.a.c	ENSGT00390000004495.k	ENSGT00390000015375	ENSGT00940000157186.c.d	ENSGT00940000160317.g	ENSGT00940000155111.vb.a	ENSGT00940000157744.d.f
Salmo	ANCESTRAL SPECIES	3	ENSGT01030000234627.a.b.b.f	ENSGT00940000157296.o.a.g	ENSGT00390000005565	ENSGT00390000000111.a.n.f	ENSGT00940000164193	ENSGT00940000156830.a.j	ENSGT00940000161826.C.cb.a	ENSGT00940000166090	ENSGT00940000159666.c.h	ENSGT00940000158336.fb	ENSGT00940000156697.i.b	ENSGT00940000158585.g.b.d	ENSGT00950000182937.A.a.o.b	ENSGT00940000155061.a.b.k.b.x	ENSGT01050000244965.a.a.g	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT01070000254256.c	ENSGT00940000154078.a.a.a.c	ENSGT00390000004495.k	ENSGT00390000015375	ENSGT00940000157186.c.d	ENSGT00940000160317.g	ENSGT00940000155111.vb.a	ENSGT00940000157744.d.f	ENSGT00650000094974.b.d
River trout	MODERN SPECIES	11	stx4 (ENSSTUG00000038982)	ARHGAP44 (ENSSTUG00000039032)	ENSSTUG00000039978	ndel1a (ENSSTUG00000039994)	armc7 (ENSSTUG00000040012)	acsf2 (ENSSTUG00000040091)	chad (ENSSTUG00000000103)	ENSSTUG00000000280	SLC16A5 (ENSSTUG00000000301)	kctd2 (ENSSTUG00000000302)	tubgcp2 (ENSSTUG00000000315)	ENSSTUG00000000339	chuk (ENSSTUG00000000362)	PSD (ENSSTUG00000000498)	ENSSTUG00000001099	ENSSTUG00000001102 ##22	ENSSTUG00000001108	ENSSTUG00000001137	selenou1b (ENSSTUG00000001142)	ENSSTUG00000001145	PDZD7 (ENSSTUG00000001149)	ENSSTUG00000001180	LZTS2 (ENSSTUG00000001187)	ENSSTUG00000001194	twnk (ENSSTUG00000001198)	mrpl43 (ENSSTUG00000001207)	SEMA4G (ENSSTUG00000001220)	mfsd13a (ENSSTUG00000001308)	plekhm1 (ENSSTUG00000001323)	kat7b (ENSSTUG00000001374)	ENSSTUG00000001979
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000066437	ENSSSAG00000041530	ENSSSAG00000042705	ENSSSAG00000042730	acsf2 (ENSSSAG00000042811)	armc7 (ENSSSAG00000087811)	chad (ENSSSAG00000043720)	ENSSSAG00000094852	ENSSSAG00000093012	ENSSSAG00000106681	ENSSSAG00000044025	ENSSSAG00000110366	ENSSSAG00000044371	ENSSSAG00000049312	ENSSSAG00000104628	ENSSSAG00000049756 ##22	ENSSSAG00000049793	ENSSSAG00000051297	ENSSSAG00000116885	ENSSSAG00000051337	LZTS2 (ENSSSAG00000051362)	RM43 (ENSSSAG00000051379)	sema4g (ENSSSAG00000051399)	mfsd13a (ENSSSAG00000051664)	ENSSSAG00000051679	kat7b (ENSSSAG00000082572)	ENSSSAG00000110554	dlx4b (ENSSSAG00000053856)	dlx3b (ENSSSAG00000053863)	itga3b (ENSSSAG00000053873)	ENSSSAG00000054045
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT01030000234627.a.b.b.f	ENSGT00940000157296.o.a.g	ENSGT00390000005565	ENSGT00390000000111.a.n.f	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C.cb.a	ENSGT00940000166090	ENSGT00940000159666.c.h	ENSGT00940000158336.fb	ENSGT00940000156697.i.b	ENSGT00940000158585.g.b.d	ENSGT00950000182937.A.a.o.b	ENSGT00940000155061.a.b.k.b.x	ENSGT01050000244965.a.a.g	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT00940000164872.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT01070000254256.c	ENSGT00940000154078.a.a.a.c	ENSGT00390000004495.k	ENSGT00390000015375	ENSGT00940000157186.c.d	ENSGT00940000160317.g	ENSGT00940000155111.vb.a
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT01030000234627.a.b.b.f	ENSGT00940000157296.o.a.g	ENSGT00390000005565	ENSGT00390000000111.a.n.f	ENSGT00940000164193	ENSGT00940000156830.a	ENSGT00940000161826.C.cb.a	ENSGT00940000166090	ENSGT00940000159666.c.h	ENSGT00940000158336.fb	ENSGT00940000156697.i.b	ENSGT00940000158585.g.b.d	ENSGT00950000182937.A.a.o.b	ENSGT00940000155061.a.b.k.b.x	ENSGT01050000244965.a.a.g	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000167117	ENSGT00940000177233	ENSGT00940000165336.a.a.a	ENSGT01100000265829	ENSGT00940000165336.a.b	ENSGT00950000183002.C.c.b	ENSGT01070000254256.c	ENSGT00940000154078.a.a.a.c	ENSGT00390000004495.k	ENSGT00390000015375	ENSGT00940000157186.c.d	ENSGT00940000160317.g	ENSGT00940000155111.vb.a	ENSGT00940000157744.d.f
Chinook salmon	MODERN SPECIES	16	ARHGAP44 (ENSOTSG00005036480)	ENSOTSG00005036727	ndel1a (ENSOTSG00005036729)	armc7 (ENSOTSG00005036730)	acsf2 (ENSOTSG00005036751)	chad (ENSOTSG00005040737)	ENSOTSG00005040738	ENSOTSG00005040739	ENSOTSG00005040743	SLC16A5 (ENSOTSG00005040787)	tubgcp2 (ENSOTSG00005040789)	ENSOTSG00005040794	chuk (ENSOTSG00005040795)	ENSOTSG00005040813	ENSOTSG00005041606	ENSOTSG00005041607 ##22	ENSOTSG00005041608	ENSOTSG00005041610	ENSOTSG00005041611	selenou1b (ENSOTSG00005041613)	ENSOTSG00005041614	PDZD7 (ENSOTSG00005041616)	ENSOTSG00005041617	LZTS2 (ENSOTSG00005041618)	twnk (ENSOTSG00005041619)	mrpl43 (ENSOTSG00005041620)	mfsd13a (ENSOTSG00005041623)	plekhm1 (ENSOTSG00005041627)	kat7b (ENSOTSG00005041646)	ENSOTSG00005042070	dlx4b (ENSOTSG00005042073)
Coho salmon	MODERN SPECIES	12	ARHGAP44 (ENSOKIG00005013261)	ENSOKIG00005013638	ENSOKIG00005013651	ndel1a (ENSOKIG00005013659)	armc7 (ENSOKIG00005013684)	acsf2 (ENSOKIG00005013789)	chad (ENSOKIG00005015579)	ENSOKIG00005015604	SLC16A5 (ENSOKIG00005015743)	kctd2 (ENSOKIG00005015752)	tubgcp2 (ENSOKIG00005015790)	ENSOKIG00005015892	chuk (ENSOKIG00005015957)	PSD (ENSOKIG00005016253)	ENSOKIG00005017368	ENSOKIG00005017371 ##22	ENSOKIG00005017382	ENSOKIG00005017422	ENSOKIG00005017479	selenou1b (ENSOKIG00005017497)	ENSOKIG00005017512	ENSOKIG00005017521	PDZD7 (ENSOKIG00005017531)	ENSOKIG00005017539	LZTS2 (ENSOKIG00005017547)	twnk (ENSOKIG00005017555)	SEMA4G (ENSOKIG00005017564)	mfsd13a (ENSOKIG00005017600)	plekhm1 (ENSOKIG00005017621)	kat7b (ENSOKIG00005017659)	ENSOKIG00005017986
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000043914	ENSOMYG00000044150	ndel1a (ENSOMYG00000044158)	armc7 (ENSOMYG00000051682)	acsf2 (ENSOMYG00000005793)	chad (ENSOMYG00000006196)	tap2t (ENSOMYG00000006397)	ENSOMYG00000006593	kctd2 (ENSOMYG00000073907)	ENSOMYG00000006942	ENSOMYG00000007289	ENSOMYG00000007793	ENSOMYG00000008041	ENSOMYG00000008157	ENSOMYG00000057142	ENSOMYG00000008199 ##22	ENSOMYG00000073073	ENSOMYG00000008279	ENSOMYG00000057843	ENSOMYG00000008305	ENSOMYG00000008322	PDZD7 (ENSOMYG00000008358)	ENSOMYG00000008373	LZTS2 (ENSOMYG00000008395)	twnk (ENSOMYG00000008412)	RM43 (ENSOMYG00000008425)	SEMA4G (ENSOMYG00000008591)	mfsd13a (ENSOMYG00000008788)	ENSOMYG00000008820	kat7b (ENSOMYG00000009046)	ENSOMYG00000009252
Huchen	DUPLICATION
Huchen	MODERN SPECIES	15	ndel1a (ENSHHUG00000039673)	armc7 (ENSHHUG00000039683)	acsf2 (ENSHHUG00000039690)	chad (ENSHHUG00000039849)	ENSHHUG00000039855	ENSHHUG00000039862	ENSHHUG00000039898	SLC16A5 (ENSHHUG00000039900)	kctd2 (ENSHHUG00000039916)	tubgcp2 (ENSHHUG00000039924)	ENSHHUG00000039952	chuk (ENSHHUG00000039994)	PSD (ENSHHUG00000040146)	ENSHHUG00000040252	ENSHHUG00000040255	ENSHHUG00000040258 ##22	ENSHHUG00000040261	ENSHHUG00000040433	ENSHHUG00000040446	ENSHHUG00000040465	PDZD7 (ENSHHUG00000040470)	LZTS2 (ENSHHUG00000040476)	twnk (ENSHHUG00000040480)	mrpl43 (ENSHHUG00000040483)	SEMA4G (ENSHHUG00000040506)	mfsd13a (ENSHHUG00000040541)	plekhm1 (ENSHHUG00000040557)	kat7b (ENSHHUG00000040570)	ENSHHUG00000040779	dlx4b (ENSHHUG00000040782)	dlx3b (ENSHHUG00000040790)
Huchen	MODERN SPECIES	628													ENSHHUG00000031380	ENSHHUG00000031378	ENSHHUG00000031366	ENSHHUG00000031345 ##22	ENSHHUG00000030931	selenou1b (ENSHHUG00000030926)	LZTS2 (ENSHHUG00000030918)	ENSHHUG00000030914	SEMA4G (ENSHHUG00000030903)	mfsd13a (ENSHHUG00000030897)	aplnr2 (ENSHHUG00000030879)	plekhm1 (ENSHHUG00000030872)	kat7b (ENSHHUG00000030763)	ENSHHUG00000030751	dlx4b (ENSHHUG00000030745)	dlx3b (ENSHHUG00000030735)
Northern pike	MODERN SPECIES	4	stx4 (ENSELUG00000009200)	ARHGAP44 (ENSELUG00000009260)	ENSELUG00000009278	ndel1a (ENSELUG00000009368)	armc7 (ENSELUG00000031596)	chad (ENSELUG00000009393)	acsf2 (ENSELUG00000009469)	ENSELUG00000009508	SLC16A5 (ENSELUG00000009522)	kctd2 (ENSELUG00000032768)	tubgcp2 (ENSELUG00000009582)	ENSELUG00000001598	chuk (ENSELUG00000009686)	ENSELUG00000009799	ELOVL6 (ENSELUG00000029872)	ENSELUG00000009914 ##22	ENSELUG00000009951	ENSELUG00000009968	selenou1b (ENSELUG00000032124)	ENSELUG00000010014	ENSELUG00000010023	PDZD7 (ENSELUG00000010038)	LZTS2 (ENSELUG00000010065)	twnk (ENSELUG00000010089)	RM43 (ENSELUG00000026129)	SEMA4G (ENSELUG00000010193)	mfsd13a (ENSELUG00000010231)	ENSELUG00000010344	msh6 (ENSELUG00000010431)	ENSELUG00000010499	FOXN2 (ENSELUG00000010538)
Otomorpha	ANCESTRAL SPECIES	426							ENSGT00500000044923	ENSGT00730000112146	ENSGT00940000157609	ENSGT00390000001197	ENSGT00910000144159.A	ENSGT00390000014666.b	ENSGT00950000182937.A.a.o	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341
Clupeiformes	ANCESTRAL SPECIES	196	ENSGT00940000164923.a.a	ENSGT00940000159038.a.a	ENSGT00390000001304	ENSGT00940000158232	ENSGT00390000006939.i.a.f.a	ENSGT00940000157790	ENSGT00390000012820	ENSGT00940000164841	ENSGT00940000158922.c	ENSGT00950000183046.a.b.k	ENSGT00940000154268.k.b	ENSGT00950000182883.a.a.b	ENSGT00950000182937.A.a.o.e	ENSGT00940000155061.a.b.k.b	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.a.a ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000002080	ENSCHAG00000002094	cox10 (ENSCHAG00000002105)	hs3st3b1b (ENSCHAG00000002118)	pmp22b (ENSCHAG00000002134)	ENSCHAG00000002154	TEKT3 (ENSCHAG00000002165)	ENSCHAG00000002180	ENSCHAG00000002195	ENSCHAG00000002203	CDC42EP4 (ENSCHAG00000002225)	SDK2 (ENSCHAG00000002282)	ENSCHAG00000003735	ENSCHAG00000003762	zgc:92749 (ENSCHAG00000003951)	ENSCHAG00000003975 ##22	ENSCHAG00000004020	ENSCHAG00000005234	mrpl43 (ENSCHAG00000005246)	twnk (ENSCHAG00000005292)	LZTS2 (ENSCHAG00000005471)	PDZD7 (ENSCHAG00000005535)	ENSCHAG00000005553	ENSCHAG00000005571	ENSCHAG00000005595	ENSCHAG00000005608	ENSCHAG00000005630	ENSCHAG00000005667	scn4aa (ENSCHAG00000005728)	ENSCHAG00000007864	ENSCHAG00000007879
Denticle herring	MODERN SPECIES	11	dcaf7 (ENSDCDG00000005630)	ENSDCDG00000005624	TACO1 (ENSDCDG00000005619)	pth3r (ENSDCDG00000005586)	rundc3ab (ENSDCDG00000005567)	ENSDCDG00000005564	ENSDCDG00000005562	ENSDCDG00000005561	ENSDCDG00000005560	ENSDCDG00000005558	ndufa4b (ENSDCDG00000005557)	NXPH3 (ENSDCDG00000005555)	ENSDCDG00000005506	ENSDCDG00000005036	zgc:92749 (ENSDCDG00000005004)	ENSDCDG00000005001 ##22	ENSDCDG00000004934	ENSDCDG00000004921	ENSDCDG00000004920	ENSDCDG00000004916	ENSDCDG00000004913	ENSDCDG00000004911	ENSDCDG00000004910	ENSDCDG00000004909	ENSDCDG00000004907	ENSDCDG00000004904	ENSDCDG00000004900	selenou1b (ENSDCDG00000004896)	ANKFN1 (ENSDCDG00000004890)	NOG (ENSDCDG00000004887)	enpp7.2 (ENSDCDG00000004885)
Clupeocephala	ANCESTRAL SPECIES	59		ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT01090000261060	ENSGT00950000183002.C.c.b	ENSGT00940000154078.a.a.a	ENSGT00390000004495	ENSGT00390000015375
Euteleosteomorpha	ANCESTRAL SPECIES	220			ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00980000198953	ENSGT00950000183002.C.c.a
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00940000155303.l	ENSGT00940000156914.o.b	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00950000182977.B.b.b.c	ENSGT01000000216166.B	ENSGT01000000216166.A	ENSGT00940000161036.B.b	ENSGT00940000162476	ENSGT00390000007125.a
Salmoninae	ANCESTRAL SPECIES	170	ENSGT00940000155303.l.f	ENSGT00940000156914.o.b.c	ENSGT00940000153997.b.b.c.b	ENSGT00940000155716.t	ENSGT00940000158282.a	ENSGT00940000156111.f	ENSGT00940000157520.b	ENSGT00940000158935.g.a	ENSGT00940000166192.b	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166680.c	ENSGT00530000063672.a.v	ENSGT00520000055589.c.l	ENSGT00950000183169.C.j	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a ##22	ENSGT00950000183185.c.a.b.a.a.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000154078.a.a.b.h	ENSGT00940000157186.d.d	ENSGT00950000182977.B.b.b.c.a.a.a.a
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000155303.l.e	ENSGT00940000156914.o.b.d	ENSGT00940000153997.b.b.c.a	ENSGT00940000155716.s	ENSGT00940000158282.b	ENSGT00940000156111.e	ENSGT00940000157520.a	ENSGT00940000158935.g.b	ENSGT00940000166192.a	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166680.d	ENSGT00530000063672.a.u	ENSGT00520000055589.c.k	ENSGT00950000183169.C.i	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00950000183185.c.a.b.a.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b.g	ENSGT00940000157186.d.c	ENSGT00390000007125.a.c.b	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x	ENSGT00390000013726.c	ENSGT00390000000134.a.d.b.a.b.a	ENSGT00940000160608.e
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000155303.l.e	ENSGT00940000156914.o.b.d	ENSGT00940000153997.b.b.c.a	ENSGT00940000155716.s	ENSGT00940000158282.b	ENSGT00940000156111.e	ENSGT00940000157520.a	ENSGT00940000158935.g.b	ENSGT00940000166192.a	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166680.d	ENSGT00530000063672.a.u	ENSGT00520000055589.c.k	ENSGT00950000183169.C.i	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00950000183185.c.a.b.a.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b.g	ENSGT00940000157186.d.c	ENSGT00390000007125.a.c.b	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x	ENSGT00390000013726.c	ENSGT00390000000134.a.d.b.a.b.a	ENSGT00940000160608.e
Atlantic salmon	MODERN SPECIES		ENSSSAG00000068583	ZFAND4 (ENSSSAG00000068607)	marchf8 (ENSSSAG00000101210)	alox5a (ENSSSAG00000068637)	slc25a16 (ENSSSAG00000068658)	ENSSSAG00000068673	ENSSSAG00000093814	if4e (ENSSSAG00000068681)	si:dkey-228d14.5 (ENSSSAG00000068698) ##22	zgc:110319 (ENSSSAG00000068703)	ccar1 (ENSSSAG00000068710)	stox1 (ENSSSAG00000068734)	ENSSSAG00000091634	ENSSSAG00000068740	ENSSSAG00000093869	zgc:154058 (ENSSSAG00000115942) ##22	mat1a (ENSSSAG00000068779)	ENSSSAG00000068999	selu (ENSSSAG00000072207)	sfxn3 (ENSSSAG00000069008)	pdzd7a (ENSSSAG00000000137)	lzts2a (ENSSSAG00000000152)	SEMA4G (ENSSSAG00000072227)	ENSSSAG00000000220	ENSSSAG00000000243	pyroxd2 (ENSSSAG00000000317)	ENSSSAG00000092416	zgc:123010 (ENSSSAG00000000491)	LOXL4 (ENSSSAG00000000522)	crtac1 (ENSSSAG00000000725)	ENSSSAG00000113491
River trout	MODERN SPECIES	9	anxa11a (ENSSTUG00000027203)	ENSSTUG00000028254	zfand4 (ENSSTUG00000028419)	marchf8 (ENSSTUG00000028448)	alox5a (ENSSTUG00000028501)	slc25a16 (ENSSTUG00000028586)	ENSSTUG00000028615	ENSSTUG00000028637	eif4e1c (ENSSTUG00000028641)	si:dkey-228d14.5 (ENSSTUG00000028679) ##22	zgc:110319 (ENSSTUG00000028714)	ccar1 (ENSSTUG00000028760)	stox1 (ENSSTUG00000028869)	si:ch211-198a12.6 (ENSSTUG00000028876)	ENSSTUG00000028880	zgc:154058 (ENSSTUG00000028903) ##22	mat1a (ENSSTUG00000028919)	ENSSTUG00000029207	ENSSTUG00000029211	ENSSTUG00000029218	sfxn3 (ENSSTUG00000029232)	pdzd7a (ENSSTUG00000029259)	ENSSTUG00000029315	lzts2a (ENSSTUG00000029318)	SEMA4G (ENSSTUG00000029333)	ENSSTUG00000029406	pyroxd2 (ENSSTUG00000029431)	zgc:123010 (ENSSTUG00000029719)	LOXL4 (ENSSTUG00000029733)	CRTAC1 (ENSSTUG00000029788)	golga7ba (ENSSTUG00000030070)
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000155303.l.e	ENSGT00940000156914.o.b.d	ENSGT00940000153997.b.b.c.a	ENSGT00940000155716.s	ENSGT00940000158282.b	ENSGT00940000156111.e	ENSGT00940000157520.a	ENSGT00940000158935.g.b	ENSGT00940000166192.a	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166680.d	ENSGT00530000063672.a.u	ENSGT00520000055589.c.k	ENSGT00950000183169.C.i	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00950000183185.c.a.b.a.a.a	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b.g	ENSGT00940000157186.d.c	ENSGT00940000159115.d	ENSGT00390000007125.a.c.b	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x	ENSGT00390000013726.c	ENSGT00390000000134.a.d.b.a.b.a
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000020207	ZFAND4 (ENSOMYG00000020255)	marchf8 (ENSOMYG00000020278)	alox5a (ENSOMYG00000020325)	slc25a16 (ENSOMYG00000020384)	ENSOMYG00000040064	ENSOMYG00000020405	ENSOMYG00000056261	eif4e1c (ENSOMYG00000020415)	si:dkey-228d14.5 (ENSOMYG00000020436) ##22	ccar1 (ENSOMYG00000020444)	stox1 (ENSOMYG00000020454)	ENSOMYG00000061066	ENSOMYG00000020460	ENSOMYG00000020494	zgc:154058 (ENSOMYG00000054275) ##22	ENSOMYG00000073435	mat1a (ENSOMYG00000020555)	ENSOMYG00000021594	selu (ENSOMYG00000053756)	sfxn3 (ENSOMYG00000021614)	pdzd7a (ENSOMYG00000021686)	lzts2a (ENSOMYG00000021746)	SEMA4G (ENSOMYG00000021758)	ENSOMYG00000021772	ENSOMYG00000021781	pyroxd2 (ENSOMYG00000021800)	zgc:123010 (ENSOMYG00000021827)	LOXL4 (ENSOMYG00000021844)	CRTAC1 (ENSOMYG00000021911)	GOLGA7B (ENSOMYG00000051786)
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000155303.l.e	ENSGT00940000156914.o.b.d	ENSGT00940000153997.b.b.c.a	ENSGT00940000155716.s	ENSGT00940000158282.b	ENSGT00940000156111.e	ENSGT00940000157520.a	ENSGT00940000158935.g.b	ENSGT00940000166192.a	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166680.d	ENSGT00530000063672.a.u	ENSGT00520000055589.c.k	ENSGT00950000183169.C.i	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00950000183185.c.a.b.a.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b.g	ENSGT00940000157186.d.c	ENSGT00940000159115.d	ENSGT00390000007125.a.c.b	ENSGT00940000164861	ENSGT00940000161036.B.a.c	ENSGT00940000157042.c.a.x	ENSGT00390000013726.c	ENSGT00390000000134.a.d.b.a.b.a
Chinook salmon	MODERN SPECIES		ENSOTSG00005031370	dlg5a (ENSOTSG00005033313)	anxa11a (ENSOTSG00005033383)	ENSOTSG00005033711	zfand4 (ENSOTSG00005033714)	marchf8 (ENSOTSG00005033721)	alox5a (ENSOTSG00005033730)	slc25a16 (ENSOTSG00005034168)	ENSOTSG00005034172	eif4e1c (ENSOTSG00005034175)	si:dkey-228d14.5 (ENSOTSG00005034176) ##22	zgc:110319 (ENSOTSG00005034177)	ccar1 (ENSOTSG00005034184)	stox1 (ENSOTSG00005034222)	si:ch211-198a12.6 (ENSOTSG00005034224)	zgc:154058 (ENSOTSG00005034226) ##22	mat1a (ENSOTSG00005034237)	ENSOTSG00005034564	ENSOTSG00005034566	ENSOTSG00005034569	sfxn3 (ENSOTSG00005034571)	pdzd7a (ENSOTSG00005034578)	lzts2a (ENSOTSG00005034581)	SEMA4G (ENSOTSG00005034586)	ENSOTSG00005034691	ENSOTSG00005034693	pyroxd2 (ENSOTSG00005034694)	zgc:123010 (ENSOTSG00005034718)	LOXL4 (ENSOTSG00005034720)	CRTAC1 (ENSOTSG00005034724)	golga7ba (ENSOTSG00005034732)
Coho salmon	MODERN SPECIES	2	dlg5a (ENSOKIG00005004590)	anxa11a (ENSOKIG00005003605)	ENSOKIG00005003380	zfand4 (ENSOKIG00005003335)	marchf8 (ENSOKIG00005003320)	alox5a (ENSOKIG00005003273)	slc25a16 (ENSOKIG00005003259)	ENSOKIG00005003256	eif4e1c (ENSOKIG00005003254)	zgc:110319 (ENSOKIG00005003251)	si:dkey-228d14.5 (ENSOKIG00005003239) ##22	ccar1 (ENSOKIG00005003127)	stox1 (ENSOKIG00005003080)	ENSOKIG00005003067	ENSOKIG00005003058	zgc:154058 (ENSOKIG00005003040) ##22	mat1a (ENSOKIG00005002839)	ENSOKIG00005002797	ENSOKIG00005002788	ENSOKIG00005002770	sfxn3 (ENSOKIG00005002723)	ENSOKIG00005002716	pdzd7a (ENSOKIG00005002692)	lzts2a (ENSOKIG00005002678)	SEMA4G (ENSOKIG00005002624)	ENSOKIG00005002606	pyroxd2 (ENSOKIG00005002542)	zgc:123010 (ENSOKIG00005002515)	LOXL4 (ENSOKIG00005002470)	CRTAC1 (ENSOKIG00005002299)	golga7ba (ENSOKIG00005002166)
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000154935.c.a.a.b	ENSGT00940000155303.l.f	ENSGT00940000156914.o.b.c	ENSGT00940000153997.b.b.c.b	ENSGT00940000155716.t	ENSGT00940000158282.a	ENSGT00940000156111.f	ENSGT00940000157520.b	ENSGT00940000158935.g.a	ENSGT00940000166192.b	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166680.c	ENSGT00530000063672.a.v	ENSGT00520000055589.c.l	ENSGT00950000183169.C.j	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183185.c.a.b.a.a.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000154078.a.a.b.h	ENSGT00940000157186.d.d	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT01000000216166.B	ENSGT01000000216166.A.a	ENSGT00390000007125.a.c.a	ENSGT00940000161036.B.a.d	ENSGT00940000157042.c.a.w	ENSGT00390000000134.a.d.b.a.b.b	ENSGT00940000160608.f	ENSGT00390000008727.a.a.d
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000153289.a.a.a.c.b.a	ENSGT00940000154935.c.a.a.b	ENSGT00940000155303.l.f	ENSGT00940000156914.o.b.c	ENSGT00940000153997.b.b.c.b.a	ENSGT00940000155716.t	ENSGT00940000158282.a	ENSGT00940000156111.f.b	ENSGT00940000158935.g.a	ENSGT00940000166192.b	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166680.c	ENSGT00530000063672.a.v	ENSGT00520000055589.c.l	ENSGT00950000183169.C.j	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183185.c.a.b.a.a.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000154078.a.a.b.h	ENSGT00940000157186.d.d	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT00950000182977.B.b.b.c.a.a.a.b	ENSGT00390000007125.a.c.a	ENSGT00940000161036.B.a.d	ENSGT00940000157042.c.a.w	ENSGT00390000000134.a.d.b.a.b.b	ENSGT00940000160608.f	ENSGT00390000008727.a.a.d.f	ENSGT00940000166602.B
River trout	MODERN SPECIES	35	KCNMA1 (ENSSTUG00000027806)	dlg5a (ENSSTUG00000027118)	anxa11a (ENSSTUG00000024612)	ENSSTUG00000024503	zfand4 (ENSSTUG00000024487)	ENSSTUG00000024484	ENSSTUG00000024435	alox5a (ENSSTUG00000024257)	ENSSTUG00000024215	eif4e1c (ENSSTUG00000024164)	si:dkey-228d14.5 (ENSSTUG00000024146) ##22	zgc:110319 (ENSSTUG00000024127)	ccar1 (ENSSTUG00000023705)	stox1 (ENSSTUG00000023679)	si:ch211-198a12.6 (ENSSTUG00000023674)	zgc:154058 (ENSSTUG00000023670) ##22	mat1a (ENSSTUG00000022642)	selenou1a (ENSSTUG00000022578)	sfxn3 (ENSSTUG00000022552)	lzts2a (ENSSTUG00000022528)	SEMA4G (ENSSTUG00000022249)	ENSSTUG00000022219	ENSSTUG00000022209	ENSSTUG00000022175	ENSSTUG00000022136	ENSSTUG00000022118	ENSSTUG00000022112	zgc:123010 (ENSSTUG00000022076)	LOXL4 (ENSSTUG00000022021)	golga7ba (ENSSTUG00000022006)	sfrp5 (ENSSTUG00000021994)
Atlantic salmon	MODERN SPECIES	9	ENSSSAG00000091016	dlg5a (ENSSSAG00000063726)	anxa11a (ENSSSAG00000067234)	ENSSSAG00000067557	ENSSSAG00000118353	ZFAND4 (ENSSSAG00000067562)	marchf8 (ENSSSAG00000068611)	alox5a (ENSSSAG00000067580)	ENSSSAG00000067599	eif4e1c (ENSSSAG00000070682)	si:dkey-228d14.5 (ENSSSAG00000122214) ##22	zgc:110319 (ENSSSAG00000070714)	ccar1 (ENSSSAG00000070723)	stox1 (ENSSSAG00000070795)	ENSSSAG00000084997	zgc:154058 (ENSSSAG00000086209) ##22	ENSSSAG00000114295	sfxn3 (ENSSSAG00000107744)	LZTS2 (ENSSSAG00000072215)	ENSSSAG00000000181	ENSSSAG00000120911	ENSSSAG00000072242	ENSSSAG00000072252	ENSSSAG00000072253	ENSSSAG00000117538	clm7 (ENSSSAG00000072247)	ENSSSAG00000072255	ENSSSAG00000072263	ENSSSAG00000072269	ENSSSAG00000100365	ENSSSAG00000039975
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000154935.d	ENSGT00940000155303.l.f	ENSGT00940000156914.o.b.c	ENSGT00940000153997.b.b.c.b	ENSGT00940000155716.t	ENSGT00940000158282.a	ENSGT00940000156111.f	ENSGT00940000157520.b	ENSGT00940000158935.g.a	ENSGT00940000166192.b	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166680.c	ENSGT00530000063672.a.v	ENSGT00520000055589.c.l	ENSGT00950000183169.C.j	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183185.c.a.b.a.a.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000154078.a.a.b.h	ENSGT00940000157186.d.d	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT01000000216166.B	ENSGT01000000216166.A.a.a	ENSGT00390000007125.a.c.a	ENSGT00940000161036.B.a.d	ENSGT00940000157042.c.a.w	ENSGT00390000000134.a.d.b.a.b.b	ENSGT00940000160608.f	ENSGT00390000008727.a.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000154935.d	ENSGT00940000155303.l.f	ENSGT00940000156914.o.b.c	ENSGT00940000153997.b.b.c.b	ENSGT00940000155716.t	ENSGT00940000158282.a	ENSGT00940000156111.f	ENSGT00940000157520.b	ENSGT00940000158935.g.a	ENSGT00940000166192.b	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166680.c	ENSGT00530000063672.a.v	ENSGT00520000055589.c.l	ENSGT00950000183169.C.j	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183185.c.a.b.a.a.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000154078.a.a.b.h	ENSGT00940000157186.d.d	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT01000000216166.B	ENSGT01000000216166.A.a.a	ENSGT00390000007125.a.c.a	ENSGT00940000161036.B.a.d	ENSGT00940000157042.c.a.w	ENSGT00390000000134.a.d.b.a.b.b
Coho salmon	MODERN SPECIES	24	anxa11a (ENSOKIG00005039615)	ENSOKIG00005041833	ZFAND4 (ENSOKIG00005041845)	marchf8 (ENSOKIG00005041891)	alox5a (ENSOKIG00005041978)	ENSOKIG00005042116	slc25a16 (ENSOKIG00005042132)	ENSOKIG00005042316	eif4e1c (ENSOKIG00005042335)	si:dkey-228d14.5 (ENSOKIG00005042464) ##22	zgc:110319 (ENSOKIG00005042474)	ccar1 (ENSOKIG00005042511)	stox1 (ENSOKIG00005042556)	si:ch211-198a12.6 (ENSOKIG00005042563)	ENSOKIG00005042574	zgc:154058 (ENSOKIG00005042584) ##22	mat1a (ENSOKIG00005042619)	selenou1a (ENSOKIG00005042808)	sfxn3 (ENSOKIG00005042841)	ENSOKIG00005042897	lzts2a (ENSOKIG00005042909)	ENSOKIG00005042931	SEMA4G (ENSOKIG00005042959)	ENSOKIG00005043128	ENSOKIG00005043221	ENSOKIG00005043301	ENSOKIG00005043392	ENSOKIG00005043405	ENSOKIG00005043457	ENSOKIG00005043469	ENSOKIG00005043477
Chinook salmon	MODERN SPECIES	179														stox1 (ENSOTSG00005020956)	si:ch211-198a12.6 (ENSOTSG00005020957)	zgc:154058 (ENSOTSG00005020958) ##22	mat1a (ENSOTSG00005020960)	selenou1a (ENSOTSG00005021066)	sfxn3 (ENSOTSG00005021069)	lzts2a (ENSOTSG00005021097)
Northern pike	MODERN SPECIES	5	ENSELUG00000023002	zfand4 (ENSELUG00000022926)	ENSELUG00000026905	marchf8 (ENSELUG00000022913)	alox5a (ENSELUG00000022892)	slc25a16 (ENSELUG00000001254)	ENSELUG00000028750	ENSELUG00000022830	eif4e1c (ENSELUG00000022791)	si:dkey-228d14.5 (ENSELUG00000022728) ##22	zgc:110319 (ENSELUG00000022693)	ccar1 (ENSELUG00000022633)	stox1 (ENSELUG00000022439)	si:ch211-198a12.6 (ENSELUG00000022430)	ENSELUG00000022418	zgc:154058 (ENSELUG00000022409) ##22	mat1a (ENSELUG00000022377)	ENSELUG00000022335	ENSELUG00000009988	sfxn3 (ENSELUG00000022252)	ENSELUG00000032547	pdzd7a (ENSELUG00000022229)	lzts2a (ENSELUG00000022213)	SEMA4G (ENSELUG00000022195)	ENSELUG00000025061	ENSELUG00000022161	ENSELUG00000026739	ENSELUG00000020766	ENSELUG00000031279	ENSELUG00000031411	ENSELUG00000031349
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.a.b.b ##22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	299	ENSGT00950000182832.A.c	ENSGT00940000161032.h	ENSGT00940000157457.f	ENSGT01030000234627.a.b.b.e	ENSGT00940000157296.o.a.h	ENSGT00390000000111.a.n.e	ENSGT00990000211521	ENSGT00940000161826.C.cb.b	ENSGT00940000159666.c.g	ENSGT00940000158336.gb	ENSGT00940000156697.i.a	ENSGT00940000158585.g.b.c	ENSGT00950000182937.A.a.o.a	ENSGT00940000155061.a.b.k.b.y	ENSGT01050000244965.a.a.h	ENSGT01030000234578.A.b.a.a.a.a.b.b.a ##22
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT00950000182832.A.c	ENSGT00940000161032.h	ENSGT00940000157457.f	ENSGT01030000234627.a.b.b.e	ENSGT00940000157296.o.a.h	ENSGT00390000000111.a.n.e	ENSGT00990000211521	ENSGT00940000161826.C.cb.b	ENSGT00940000159666.c.g	ENSGT00940000158336.gb	ENSGT00940000156697.i.a	ENSGT00940000158585.g.b.c	ENSGT00950000182937.A.a.o.a	ENSGT00940000155061.a.b.k.b.y	ENSGT01050000244965.a.a.h	ENSGT01030000234578.A.b.a.a.a.a.b.b.a ##22	ENSGT00940000155338.q	ENSGT00940000154881.c
Salmo	ANCESTRAL SPECIES	31	ENSGT00940000161032.h	ENSGT00940000157457.f	ENSGT01030000234627.a.b.b.e	ENSGT00940000157296.o.a.h	ENSGT00390000000111.a.n.e	ENSGT00990000211521	ENSGT00940000161826.C.cb.b	ENSGT00940000156830.a.i	ENSGT00940000159666.c.g	ENSGT00940000158336.gb	ENSGT00940000156697.i.a	ENSGT00940000158585.g.b.c	ENSGT00950000182937.A.a.o.a	ENSGT00940000155061.a.b.k.b.y	ENSGT01050000244965.a.a.h	ENSGT01030000234578.A.b.a.a.a.a.b.b.a ##22	ENSGT00940000155338.q	ENSGT00940000154881.c
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000066478	ENSSSAG00000066449	ENSSSAG00000041484	ENSSSAG00000065326	ENSSSAG00000065227	ENSSSAG00000065145	chad (ENSSSAG00000101094)	ENSSSAG00000064957	ENSSSAG00000093542	ENSSSAG00000064917	ENSSSAG00000064799	ENSSSAG00000064629	ENSSSAG00000062653	ENSSSAG00000055693	ENSSSAG00000055568	ENSSSAG00000070263 ##22	ENSSSAG00000066852	ENSSSAG00000116922	ENSSSAG00000066463
River trout	MODERN SPECIES	1	chmp2a (ENSSTUG00000012266)	ENSSTUG00000012231	ENSSTUG00000012175	stx4 (ENSSTUG00000012131)	ARHGAP44 (ENSSTUG00000012017)	ndel1a (ENSSTUG00000011966)	ENSSTUG00000011943	chad (ENSSTUG00000011935)	ENSSTUG00000011927	SLC16A5 (ENSSTUG00000011894)	kctd2 (ENSSTUG00000011876)	tubgcp2 (ENSSTUG00000011538)	chuk (ENSSTUG00000011318)	ENSSTUG00000011179	ENSSTUG00000011168	ENSSTUG00000011157 ##22	ENSSTUG00000009392	aclya (ENSSTUG00000009150)	pax2a (ENSSTUG00000008987)	ENSSTUG00000008977	cdhr1a (ENSSTUG00000008896)	ENSSTUG00000008878	ENSSTUG00000008849	ablim1b (ENSSTUG00000008831)	NHLRC2 (ENSSTUG00000008569)	dclre1a (ENSSTUG00000008411)	CCDC186 (ENSSTUG00000008301)	tdrd1 (ENSSTUG00000007905)	casp7 (ENSSTUG00000007821)	nrap (ENSSTUG00000007483)	dnmbp (ENSSTUG00000007166)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.a.b.b.b.a ##22
Huchen	MODERN SPECIES	1560									ENSHHUG00000045025	eif4e1c (ENSHHUG00000045027)	si:dkey-228d14.5 (ENSHHUG00000045029) ##22	zgc:110319 (ENSHHUG00000045035)	ccar1 (ENSHHUG00000045040)	stox1 (ENSHHUG00000045060)	si:ch211-198a12.6 (ENSHHUG00000045067)	zgc:154058 (ENSHHUG00000045079) ##22	mat1a (ENSHHUG00000045086)
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.a.b.b.b.a ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.a.b.b.b.a ##22
Rainbow trout	MODERN SPECIES		ENSOMYG00000042931	anxa11a (ENSOMYG00000042976)	ENSOMYG00000057914	ZFAND4 (ENSOMYG00000043690)	ENSOMYG00000069511	ENSOMYG00000077423	MARCHF8 (ENSOMYG00000051052)	alox5a (ENSOMYG00000043777)	ENSOMYG00000044210	eif4e1c (ENSOMYG00000044217)	ENSOMYG00000044223	zgc:110319 (ENSOMYG00000044231)	ccar1 (ENSOMYG00000044243)	stox1 (ENSOMYG00000044262)	ENSOMYG00000044264	zgc:154058 (ENSOMYG00000044266) ##22	mat1a (ENSOMYG00000044292)	ENSOMYG00000061168	selenou1a (ENSOMYG00000044360)	sfxn3 (ENSOMYG00000044368)	lzts2a (ENSOMYG00000044382)	ENSOMYG00000044391	ENSOMYG00000044429	ENSOMYG00000044445	ENSOMYG00000044402	ENSOMYG00000053342	ENSOMYG00000044433	ENSOMYG00000058406	ENSOMYG00000056088	ENSOMYG00000044438	ENSOMYG00000044448
Salmoninae	ANCESTRAL SPECIES	420	ENSGT00940000155303.l.e	ENSGT00940000156914.o.b.d	ENSGT00940000153997.b.b.c.a	ENSGT00940000155716.s	ENSGT00940000158282.b	ENSGT00940000156111.e	ENSGT00940000157520.a	ENSGT00940000158935.g.b	ENSGT00940000166192.a	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166680.d	ENSGT00530000063672.a.u	ENSGT00520000055589.c.k	ENSGT00950000183169.C.i	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.b.b.b ##22	ENSGT00950000183185.c.a.b.a.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a.h	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b.g
Huchen	MODERN SPECIES	1601																zgc:154058 (ENSHHUG00000035856) ##22	mat1a (ENSHHUG00000035628)	ENSHHUG00000035615	ENSHHUG00000035598	sfxn3 (ENSHHUG00000035555)	pdzd7a (ENSHHUG00000035525)	ENSHHUG00000035521	ENSHHUG00000035512	lzts2a (ENSHHUG00000035498)
Acanthomorphata	ANCESTRAL SPECIES	24	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Cod	MODERN SPECIES	6	ENSGMOG00000006493	ENSGMOG00000006569	ENSGMOG00000006578	ENSGMOG00000006605	ZFAND4 (ENSGMOG00000006650)	marchf8 (ENSGMOG00000006671)	alox5a (ENSGMOG00000006677)	ENSGMOG00000029870	eif4e1c (ENSGMOG00000006731)	si:dkey-228d14.5 (ENSGMOG00000006744) ##22	zgc:110319 (ENSGMOG00000015309)	ccar1 (ENSGMOG00000006757)	stox1 (ENSGMOG00000034873)	ENSGMOG00000030442	ENSGMOG00000036175	zgc:154058 (ENSGMOG00000031801) ##22	mat1a (ENSGMOG00000006848)	selenou1a (ENSGMOG00000027077)	ENSGMOG00000006875	sfxn3 (ENSGMOG00000006881)	pdzd7a (ENSGMOG00000036589)	ENSGMOG00000030524	lzts2a (ENSGMOG00000026923)	SEMA4G (ENSGMOG00000013766)	ENSGMOG00000022891	ENSGMOG00000012528	ENSGMOG00000025115	ENSGMOG00000012531	ENSGMOG00000012533	ENSGMOG00000012535	ENSGMOG00000012536
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Pinecone sodierfish	MODERN SPECIES	6	pi4k2a (ENSMMDG00005008344)	ENSMMDG00005008342	ENSMMDG00005008337	ENSMMDG00005008329	zfand4 (ENSMMDG00005008325)	marchf8 (ENSMMDG00005008320)	alox5a (ENSMMDG00005008303)	slc25a16 (ENSMMDG00005008266)	ENSMMDG00005008123	eif4e1c (ENSMMDG00005008114)	ENSMMDG00005008109	zgc:110319 (ENSMMDG00005008099)	ccar1 (ENSMMDG00005008087)	stox1 (ENSMMDG00005008079)	si:ch211-198a12.6 (ENSMMDG00005008075)	zgc:154058 (ENSMMDG00005008074) ##22	mat1a (ENSMMDG00005007582)	ENSMMDG00005007557	ENSMMDG00005007554	ENSMMDG00005007548	sfxn3 (ENSMMDG00005007524)	ENSMMDG00005007517	pdzd7a (ENSMMDG00005007512)	lzts2a (ENSMMDG00005007507)	SEMA4G (ENSMMDG00005007503)	tp53bp2a (ENSMMDG00005005348)	XPO5 (ENSMMDG00005005221)	ENSMMDG00005005187	EFEMP1 (ENSMMDG00005005134)	MARK1 (ENSMMDG00005005062)	lgi1a (ENSMMDG00005005041)
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Tiger tail seahorse	MODERN SPECIES	511	ENSHCOG00000004266	zfand4 (ENSHCOG00000004248)	marchf8 (ENSHCOG00000004199)	alox5a (ENSHCOG00000004181)	alox5a (ENSHCOG00000004172)	ccdc93 (ENSHCOG00000004164)	slc25a16 (ENSHCOG00000004156)	ENSHCOG00000004135	eif4e1c (ENSHCOG00000004116)	si:dkey-228d14.5 (ENSHCOG00000004102) ##22	zgc:110319 (ENSHCOG00000004095)	ccar1 (ENSHCOG00000004083)	stox1 (ENSHCOG00000004039)	si:ch211-198a12.6 (ENSHCOG00000004031)	ENSHCOG00000004013	zgc:154058 (ENSHCOG00000003915) ##22	mat1a (ENSHCOG00000003901)	ENSHCOG00000003863	ENSHCOG00000003834	ENSHCOG00000003824	sfxn3 (ENSHCOG00000003811)	sfxn3 (ENSHCOG00000003775)	lzts2a (ENSHCOG00000003752)	SEMA4G (ENSHCOG00000003742)	tp53bp2a (ENSHCOG00000003723)	ENSHCOG00000003647	XPO5 (ENSHCOG00000003642)	EFEMP1 (ENSHCOG00000000106)	tppp3 (ENSHCOG00000003606)	MARK1 (ENSHCOG00000003592)	ENSHCOG00000003570
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000173563
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000157609	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00940000157825.b
Tetraodon	MODERN SPECIES	9	pgam1a (ENSTNIG00000008678)	ENSTNIG00000008677	ENSTNIG00000008676	zfand4 (ENSTNIG00000008675)	marchf8 (ENSTNIG00000008674)	alox5a (ENSTNIG00000008673)	slc25a16 (ENSTNIG00000008672)	ENSTNIG00000008671	eif4e1c (ENSTNIG00000008670)	ENSTNIG00000008669	echs1 (ENSTNIG00000008668)	zgc:110319 (ENSTNIG00000000607)	ccar1 (ENSTNIG00000008667)	si:ch211-198a12.6 (ENSTNIG00000008666)	ENSTNIG00000008665	zgc:154058 (ENSTNIG00000002088) ##22	mat1a (ENSTNIG00000008664)	sfxn3 (ENSTNIG00000008663)	pdzd7a (ENSTNIG00000008662)	lzts2a (ENSTNIG00000008661)	SEMA4G (ENSTNIG00000008660)	tp53bp2a (ENSTNIG00000008659)	XPO5 (ENSTNIG00000008658)	EFEMP1 (ENSTNIG00000008657)	MARK1 (ENSTNIG00000008656)	lgi1a (ENSTNIG00000008655)	PDE6C (ENSTNIG00000008654)	MYOF (ENSTNIG00000008653)	PARG (ENSTNIG00000008652)	OGDHL (ENSTNIG00000008651)	chata (ENSTNIG00000008650)
Fugu	MODERN SPECIES	16	ENSTRUG00000005455	ENSTRUG00000004311	zfand4 (ENSTRUG00000004042)	marchf8 (ENSTRUG00000025265)	alox5a (ENSTRUG00000002647)	slc25a16 (ENSTRUG00000013655)	ENSTRUG00000021262	eif4e1c (ENSTRUG00000029039)	si:dkey-228d14.5 (ENSTRUG00000013556) ##22	echs1 (ENSTRUG00000013493)	zgc:110319 (ENSTRUG00000013457)	ccar1 (ENSTRUG00000013280)	stox1 (ENSTRUG00000021677)	si:ch211-198a12.6 (ENSTRUG00000023373)	ENSTRUG00000031477	zgc:154058 (ENSTRUG00000012956) ##22	mat1a (ENSTRUG00000032808)	selenou1a (ENSTRUG00000025147)	ENSTRUG00000022292	ENSTRUG00000024600	sfxn3 (ENSTRUG00000012754)	ENSTRUG00000024665	pdzd7a (ENSTRUG00000012702)	lzts2a (ENSTRUG00000012594)	SEMA4G (ENSTRUG00000012429)	tp53bp2a (ENSTRUG00000012198)	XPO5 (ENSTRUG00000012007)	ENSTRUG00000011867	MARK1 (ENSTRUG00000011510)	lgi1a (ENSTRUG00000011322)	MYOF (ENSTRUG00000010522)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Ballan wrasse	MODERN SPECIES	298	ENSLBEG00000006357	marveld1 (ENSLBEG00000006382)	pgam1a (ENSLBEG00000006415)	ENSLBEG00000006502	zfand4 (ENSLBEG00000006651)	marchf8 (ENSLBEG00000006681)	alox5a (ENSLBEG00000006762)	slc25a16 (ENSLBEG00000006861)	ENSLBEG00000006929	eif4e1c (ENSLBEG00000007011)	si:dkey-228d14.5 (ENSLBEG00000007056) ##22	zgc:110319 (ENSLBEG00000007112)	ccar1 (ENSLBEG00000007156)	stox1 (ENSLBEG00000007252)	si:ch211-198a12.6 (ENSLBEG00000007315)	zgc:154058 (ENSLBEG00000007325) ##22	mat1a (ENSLBEG00000007342)	ENSLBEG00000007388	ENSLBEG00000007433	selenou1a (ENSLBEG00000007449)	sfxn3 (ENSLBEG00000007496)	pdzd7a (ENSLBEG00000007662)	ENSLBEG00000007722	lzts2a (ENSLBEG00000007764)	SEMA4G (ENSLBEG00000007912)	tp53bp2a (ENSLBEG00000008017)	XPO5 (ENSLBEG00000008107)	ENSLBEG00000008189	EFEMP1 (ENSLBEG00000008234)	ENSLBEG00000008272
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Perciformes	ANCESTRAL SPECIES	17	ENSGT00510000049375	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00510000049375	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Stickleback	MODERN SPECIES	6	ENSGACG00000007709	zfand4 (ENSGACG00000007740)	marchf8 (ENSGACG00000007749)	alox5a (ENSGACG00000007762)	slc25a16 (ENSGACG00000007784)	ENSGACG00000007793	eif4e1c (ENSGACG00000007799)	si:dkey-228d14.5 (ENSGACG00000007851) ##22	zgc:110319 (ENSGACG00000007857)	ccar1 (ENSGACG00000007905)	stox1 (ENSGACG00000007917)	ENSGACG00000007922	ENSGACG00000007924	ENSGACG00000007928	ENSGACG00000007939	zgc:154058 (ENSGACG00000007943) ##22	ENSGACG00000007954	mat1a (ENSGACG00000007957)	selenou1a (ENSGACG00000008002)	ENSGACG00000008018	sfxn3 (ENSGACG00000008020)	ENSGACG00000008028	lzts2a (ENSGACG00000008031)	SEMA4G (ENSGACG00000008034)	tp53bp2a (ENSGACG00000008040)	XPO5 (ENSGACG00000008050)	EFEMP1 (ENSGACG00000008091)	MARK1 (ENSGACG00000008095)	lgi1a (ENSGACG00000008101)	MYOF (ENSGACG00000008124)	PARG (ENSGACG00000008164)
Lumpfish	MODERN SPECIES	6	ENSCLMG00005013430	ENSCLMG00005013431	ENSCLMG00005013432	zfand4 (ENSCLMG00005013434)	marchf8 (ENSCLMG00005013435)	alox5a (ENSCLMG00005013436)	alox5a (ENSCLMG00005013438)	slc25a16 (ENSCLMG00005013439)	ENSCLMG00005013440	eif4e1c (ENSCLMG00005013442)	si:dkey-228d14.5 (ENSCLMG00005013443) ##22	zgc:110319 (ENSCLMG00005013444)	ccar1 (ENSCLMG00005013456)	ENSCLMG00005013484	ENSCLMG00005013487	zgc:154058 (ENSCLMG00005013493) ##22	mat1a (ENSCLMG00005013501)	ENSCLMG00005013644	ENSCLMG00005013647	ENSCLMG00005013648	ENSCLMG00005013650	sfxn3 (ENSCLMG00005013653)	pdzd7a (ENSCLMG00005013730)	ENSCLMG00005013734	lzts2a (ENSCLMG00005013735)	SEMA4G (ENSCLMG00005013737)	tp53bp2a (ENSCLMG00005013742)	XPO5 (ENSCLMG00005013758)	ENSCLMG00005013788	EFEMP1 (ENSCLMG00005013803)	MARK1 (ENSCLMG00005014166)
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00510000049375	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Channel bull blenny	MODERN SPECIES	6	marveld1 (ENSCGOG00000015344)	pgam1a (ENSCGOG00000015347)	ENSCGOG00000015371	ENSCGOG00000015373	zfand4 (ENSCGOG00000015392)	marchf8 (ENSCGOG00000015399)	alox5a (ENSCGOG00000015424)	slc25a16 (ENSCGOG00000015970)	ENSCGOG00000015976	eif4e1c (ENSCGOG00000015979)	si:dkey-228d14.5 (ENSCGOG00000015994) ##22	zgc:110319 (ENSCGOG00000015996)	ccar1 (ENSCGOG00000015998)	stox1 (ENSCGOG00000016100)	si:ch211-198a12.6 (ENSCGOG00000016101)	zgc:154058 (ENSCGOG00000016103) ##22	mat1a (ENSCGOG00000016114)	ENSCGOG00000016300	selenou1a (ENSCGOG00000016312)	sfxn3 (ENSCGOG00000016327)	pdzd7a (ENSCGOG00000016379)	ENSCGOG00000016385	lzts2a (ENSCGOG00000016387)	tp53bp2a (ENSCGOG00000016405)	XPO5 (ENSCGOG00000016740)	ENSCGOG00000017470	EFEMP1 (ENSCGOG00000017479)	MARK1 (ENSCGOG00000017745)	lgi1a (ENSCGOG00000017876)	PDE6C (ENSCGOG00000018047)	ENSCGOG00000018120
Pike perch	MODERN SPECIES	10	marveld1 (ENSSLUG00000021471)	ENSSLUG00000021474	ENSSLUG00000021479	ENSSLUG00000021496	zfand4 (ENSSLUG00000021516)	marchf8 (ENSSLUG00000021524)	alox5a (ENSSLUG00000021542)	slc25a16 (ENSSLUG00000021594)	ENSSLUG00000021603	eif4e1c (ENSSLUG00000021618)	ENSSLUG00000021640	zgc:110319 (ENSSLUG00000021644)	ccar1 (ENSSLUG00000021681)	stox1 (ENSSLUG00000021880)	si:ch211-198a12.6 (ENSSLUG00000021882)	zgc:154058 (ENSSLUG00000021889) ##22	mat1a (ENSSLUG00000021923)	ENSSLUG00000022161	ENSSLUG00000022163	ENSSLUG00000022165	ENSSLUG00000022169	sfxn3 (ENSSLUG00000022177)	pdzd7a (ENSSLUG00000022184)	ENSSLUG00000022195	lzts2a (ENSSLUG00000022199)	SEMA4G (ENSSLUG00000022218)	tp53bp2a (ENSSLUG00000022311)	XPO5 (ENSSLUG00000023037)	EFEMP1 (ENSSLUG00000023293)	MARK1 (ENSSLUG00000023404)	lgi1a (ENSSLUG00000024009)
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00940000157825.b
European seabass	MODERN SPECIES	1	ENSDLAG00005013994	ENSDLAG00005014016	ENSDLAG00005014064	ZFAND4 (ENSDLAG00005014148)	marchf8 (ENSDLAG00005014173)	alox5a (ENSDLAG00005014207)	slc25a16 (ENSDLAG00005014269)	ENSDLAG00005014305	eif4e1c (ENSDLAG00005027071)	si:dkey-228d14.5 (ENSDLAG00005000069) ##22	zgc:110319 (ENSDLAG00005000075)	ccar1 (ENSDLAG00005000085)	stox1 (ENSDLAG00005000108)	ENSDLAG00005034738	ENSDLAG00005000118	zgc:154058 (ENSDLAG00005027235) ##22	mat1a (ENSDLAG00005000221)	selenou1a (ENSDLAG00005031122)	ENSDLAG00005000336	sfxn3 (ENSDLAG00005030223)	pdzd7a (ENSDLAG00005000364)	ENSDLAG00005000371	lzts2a (ENSDLAG00005000375)	SEMA4G (ENSDLAG00005000377)	ENSDLAG00005000395	ENSDLAG00005000445	ENSDLAG00005032825	ENSDLAG00005000508	ENSDLAG00005000614	ENSDLAG00005000930	ENSDLAG00005001029
Large yellow croaker	MODERN SPECIES	2	marveld1 (ENSLCRG00005010443)	pgam1a (ENSLCRG00005010445)	ENSLCRG00005010450	ENSLCRG00005010452	zfand4 (ENSLCRG00005010454)	marchf8 (ENSLCRG00005010457)	alox5a (ENSLCRG00005010486)	slc25a16 (ENSLCRG00005010538)	ENSLCRG00005010540	eif4e1c (ENSLCRG00005010542)	si:dkey-228d14.5 (ENSLCRG00005010597) ##22	zgc:110319 (ENSLCRG00005010598)	ccar1 (ENSLCRG00005010601)	stox1 (ENSLCRG00005010706)	si:ch211-198a12.6 (ENSLCRG00005010707)	zgc:154058 (ENSLCRG00005010709) ##22	mat1a (ENSLCRG00005010716)	selenou1a (ENSLCRG00005012725)	ENSLCRG00005012727	ENSLCRG00005012729	sfxn3 (ENSLCRG00005012730)	pdzd7a (ENSLCRG00005012736)	ENSLCRG00005012738	lzts2a (ENSLCRG00005012740)	SEMA4G (ENSLCRG00005012743)	tp53bp2a (ENSLCRG00005012753)	XPO5 (ENSLCRG00005013553)	ENSLCRG00005013561	EFEMP1 (ENSLCRG00005013571)	ENSLCRG00005013966	lgi1a (ENSLCRG00005014712)
Gilthead seabream	MODERN SPECIES	6	marveld1 (ENSSAUG00010026020)	pgam1a (ENSSAUG00010026018)	ENSSAUG00010026015	zfand4 (ENSSAUG00010026008)	marchf8 (ENSSAUG00010026006)	alox5a (ENSSAUG00010026005)	slc25a16 (ENSSAUG00010026002)	TET1 (ENSSAUG00010026001)	eif4e1c (ENSSAUG00010025999)	si:dkey-228d14.5 (ENSSAUG00010025997) ##22	zgc:110319 (ENSSAUG00010025996)	ccar1 (ENSSAUG00010025837)	stox1 (ENSSAUG00010025831)	si:ch211-198a12.6 (ENSSAUG00010025829)	ENSSAUG00010025828	zgc:154058 (ENSSAUG00010025827) ##22	mat1a (ENSSAUG00010025808)	ENSSAUG00010025799	ENSSAUG00010025800	ENSSAUG00010025797	sfxn3 (ENSSAUG00010025794)	ENSSAUG00010025793	pdzd7a (ENSSAUG00010025790)	lzts2a (ENSSAUG00010025789)	SEMA4G (ENSSAUG00010025787)	tp53bp2a (ENSSAUG00010025740)	XPO5 (ENSSAUG00010025720)	ENSSAUG00010025714	EFEMP1 (ENSSAUG00010025485)	MARK1 (ENSSAUG00010024538)	lgi1a (ENSSAUG00010024510)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Carangaria	ANCESTRAL SPECIES	19	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Seriola	ANCESTRAL SPECIES	17	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Yellowtail amberjack	MODERN SPECIES	2713	marveld1 (ENSSLDG00000019528)	pgam1a (ENSSLDG00000019539)	ENSSLDG00000019544	ENSSLDG00000019605	zfand4 (ENSSLDG00000019719)	marchf8 (ENSSLDG00000019743)	alox5a (ENSSLDG00000019789)	slc25a16 (ENSSLDG00000019821)	ENSSLDG00000019848	eif4e1c (ENSSLDG00000019869)	si:dkey-228d14.5 (ENSSLDG00000019893) ##22	zgc:110319 (ENSSLDG00000019918)	ccar1 (ENSSLDG00000019960)	stox1 (ENSSLDG00000020019)	si:ch211-198a12.6 (ENSSLDG00000020028)	zgc:154058 (ENSSLDG00000020033) ##22	mat1a (ENSSLDG00000020047)	selenou1a (ENSSLDG00000020076)	ENSSLDG00000020109	ENSSLDG00000020117	sfxn3 (ENSSLDG00000020134)	pdzd7a (ENSSLDG00000020157)	ENSSLDG00000020195	lzts2a (ENSSLDG00000020212)	SEMA4G (ENSSLDG00000020247)	tp53bp2a (ENSSLDG00000020289)	XPO5 (ENSSLDG00000020343)	ENSSLDG00000020404	EFEMP1 (ENSSLDG00000020448)	MARK1 (ENSSLDG00000020478)	lgi1a (ENSSLDG00000020611)
Greater amberjack	MODERN SPECIES	147	pgam1a (ENSSDUG00000008810)	ENSSDUG00000008825	ENSSDUG00000008867	zfand4 (ENSSDUG00000008956)	marchf8 (ENSSDUG00000008987)	alox5a (ENSSDUG00000009042)	slc25a16 (ENSSDUG00000009069)	ENSSDUG00000009091	eif4e1c (ENSSDUG00000009117)	si:dkey-228d14.5 (ENSSDUG00000009142) ##22	zgc:110319 (ENSSDUG00000009175)	ccar1 (ENSSDUG00000009187)	stox1 (ENSSDUG00000009229)	si:ch211-198a12.6 (ENSSDUG00000009234)	ENSSDUG00000009240	zgc:154058 (ENSSDUG00000009257) ##22	mat1a (ENSSDUG00000009302)	selenou1a (ENSSDUG00000009335)	ENSSDUG00000009363	ENSSDUG00000009374	sfxn3 (ENSSDUG00000009396)	pdzd7a (ENSSDUG00000009446)	lzts2a (ENSSDUG00000009475)	SEMA4G (ENSSDUG00000009503)	tp53bp2a (ENSSDUG00000009580)	XPO5 (ENSSDUG00000009710)	ENSSDUG00000009871	EFEMP1 (ENSSDUG00000009905)	MARK1 (ENSSDUG00000009938)	lgi1a (ENSSDUG00000010014)	ENSSDUG00000010042
Barramundi perch	MODERN SPECIES	14	ENSLCAG00010004237	ENSLCAG00010004244	zfand4 (ENSLCAG00010004251)	marchf8 (ENSLCAG00010004255)	alox5a (ENSLCAG00010004266)	slc25a16 (ENSLCAG00010004272)	ENSLCAG00010004273	ENSLCAG00010004276	eif4e1c (ENSLCAG00010004283)	si:dkey-228d14.5 (ENSLCAG00010004313) ##22	zgc:110319 (ENSLCAG00010004319)	ccar1 (ENSLCAG00010004327)	stox1 (ENSLCAG00010004355)	si:ch211-198a12.6 (ENSLCAG00010004360)	ENSLCAG00010004363	zgc:154058 (ENSLCAG00010004371) ##22	mat1a (ENSLCAG00010004388)	selenou1a (ENSLCAG00010004462)	ENSLCAG00010004468	ENSLCAG00010004474
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00940000157825.b
Tongue sole	MODERN SPECIES	3	PGAM1 (ENSCSEG00000006519)	ENSCSEG00000006534	ENSCSEG00000006553	zfand4 (ENSCSEG00000006564)	ENSCSEG00000006577	alox5a (ENSCSEG00000006607)	slc25a16 (ENSCSEG00000006645)	ENSCSEG00000006668	eif4e1c (ENSCSEG00000006680)	si:dkey-228d14.5 (ENSCSEG00000006688) ##22	zgc:110319 (ENSCSEG00000006699)	ccar1 (ENSCSEG00000006707)	ENSCSEG00000006729	si:ch211-198a12.6 (ENSCSEG00000006739)	ENSCSEG00000006742	zgc:154058 (ENSCSEG00000006748) ##22	mat1a (ENSCSEG00000006756)	jag1b (ENSCSEG00000006774)	BTBD3 (ENSCSEG00000006847)	sptlc3 (ENSCSEG00000006855)	ism1 (ENSCSEG00000006862)	tasp1 (ENSCSEG00000006877)	ENSCSEG00000006931	flrt3 (ENSCSEG00000006975)	fuom (ENSCSEG00000006986)	echs1 (ENSCSEG00000007019)	sprn (ENSCSEG00000007151)	mtg1 (ENSCSEG00000007158)	paox (ENSCSEG00000007205)	rassf4a (ENSCSEG00000007227)	ENSCSEG00000007273
Turbot	MODERN SPECIES	6	ENSSMAG00000002635	ENSSMAG00000002473	ZFAND4 (ENSSMAG00000002454)	marchf8 (ENSSMAG00000002381)	alox5a (ENSSMAG00000002325)	slc25a16 (ENSSMAG00000002289)	ENSSMAG00000002287	ENSSMAG00000002276	eif4e1c (ENSSMAG00000002255)	si:dkey-228d14.5 (ENSSMAG00000002228) ##22	zgc:110319 (ENSSMAG00000002222)	ccar1 (ENSSMAG00000002119)	stox1 (ENSSMAG00000002098)	ENSSMAG00000002089	ENSSMAG00000002081	zgc:154058 (ENSSMAG00000002057) ##22	mat1a (ENSSMAG00000002023)	selenou1a (ENSSMAG00000001968)	ENSSMAG00000031209	ENSSMAG00000001939	sfxn3 (ENSSMAG00000001892)	ENSSMAG00000030911	LZTS2 (ENSSMAG00000001796)	ENSSMAG00000001755	ENSSMAG00000001621	ENSSMAG00000001548	ENSSMAG00000001525	ENSSMAG00000001509	ENSSMAG00000001463	ENSSMAG00000001434	PDE6C (ENSSMAG00000001381)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT01030000234518.A.b
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000000913	ENSMAMG00000000839	ENSMAMG00000000703	ZFAND4 (ENSMAMG00000000662)	marchf8 (ENSMAMG00000000649)	alox5a (ENSMAMG00000000596)	slc25a16 (ENSMAMG00000000546)	TET1 (ENSMAMG00000000506)	eif4e1c (ENSMAMG00000000450)	si:dkey-228d14.5 (ENSMAMG00000027672) ##22	zgc:110319 (ENSMAMG00000000383)	ccar1 (ENSMAMG00000000309)	stox1 (ENSMAMG00000000303)	ENSMAMG00000021854	ENSMAMG00000021852	ENSMAMG00000021849 ##22	mat1a (ENSMAMG00000021845)	ENSMAMG00000021841	ENSMAMG00000021838	ENSMAMG00000024686	ADGRB3 (ENSMAMG00000021818)	lmbrd1 (ENSMAMG00000021805)	ENSMAMG00000021803	col9a1b (ENSMAMG00000021789)	fam135a (ENSMAMG00000021781)	zgc:172136 (ENSMAMG00000021773)	TARBP1 (ENSMAMG00000021760)	ENSMAMG00000021753	ENSMAMG00000021748	kcnk1b (ENSMAMG00000021745)	ENSMAMG00000021743
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT01030000234518.A.b
Siamese fighting fish	MODERN SPECIES	6	pgam1a (ENSBSLG00000022085)	ENSBSLG00000022097	ENSBSLG00000022115	zfand4 (ENSBSLG00000022171)	marchf8 (ENSBSLG00000022176)	alox5a (ENSBSLG00000022193)	slc25a16 (ENSBSLG00000022220)	TET1 (ENSBSLG00000022230)	eif4e1c (ENSBSLG00000022234)	si:dkey-228d14.5 (ENSBSLG00000022245) ##22	zgc:110319 (ENSBSLG00000022252)	ccar1 (ENSBSLG00000022275)	stox1 (ENSBSLG00000022576)	si:ch211-198a12.6 (ENSBSLG00000022579)	ENSBSLG00000022580	zgc:154058 (ENSBSLG00000022587) ##22	mat1a (ENSBSLG00000022609)	selenou1a (ENSBSLG00000022757)	ENSBSLG00000022764	sfxn3 (ENSBSLG00000022767)	pdzd7a (ENSBSLG00000022782)	ENSBSLG00000022848	lzts2a (ENSBSLG00000022866)	SEMA4G (ENSBSLG00000022887)	tp53bp2a (ENSBSLG00000022960)	XPO5 (ENSBSLG00000023345)	ENSBSLG00000023394	MARK1 (ENSBSLG00000023665)	lgi1a (ENSBSLG00000024400)	FFAR4 (ENSBSLG00000024495)	MYOF (ENSBSLG00000024537)
Climbing perch	MODERN SPECIES	6	ENSATEG00000001446	ENSATEG00000001472	ENSATEG00000001486	ZFAND4 (ENSATEG00000001509)	marchf8 (ENSATEG00000001524)	alox5a (ENSATEG00000001548)	slc25a16 (ENSATEG00000027178)	ENSATEG00000001663	eif4e1c (ENSATEG00000026885)	si:dkey-228d14.5 (ENSATEG00000025545) ##22	zgc:110319 (ENSATEG00000001685)	ccar1 (ENSATEG00000001698)	stox1 (ENSATEG00000001830)	ENSATEG00000001833	ENSATEG00000001843	zgc:154058 (ENSATEG00000001851) ##22	mat1a (ENSATEG00000001892)	selenou1a (ENSATEG00000001987)	ENSATEG00000027954	ENSATEG00000001944	sfxn3 (ENSATEG00000029671)	pdzd7a (ENSATEG00000002064)	ENSATEG00000027993	lzts2a (ENSATEG00000002117)	SEMA4G (ENSATEG00000002125)	ENSATEG00000002135	ENSATEG00000002222	ENSATEG00000002347	ENSATEG00000002384	ENSATEG00000002440	ENSATEG00000002486
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000173563
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111.k	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Bicolor damselfish	MODERN SPECIES	2380										eif4e1c (ENSSPAG00000021325)	si:dkey-228d14.5 (ENSSPAG00000021339) ##22	zgc:110319 (ENSSPAG00000021349)	ccar1 (ENSSPAG00000021364)	stox1 (ENSSPAG00000021445)	si:ch211-198a12.6 (ENSSPAG00000021451)	zgc:154058 (ENSSPAG00000021455) ##22	mat1a (ENSSPAG00000021464)	ENSSPAG00000021485	ENSSPAG00000021500	ENSSPAG00000021520	ENSSPAG00000021526
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111.k	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111.k	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Clown anemonefish	MODERN SPECIES	3602	marveld1 (ENSAOCG00000003974)	ENSAOCG00000002471	ENSAOCG00000003986	ENSAOCG00000000122	zfand4 (ENSAOCG00000004025)	marchf8 (ENSAOCG00000000137)	alox5a (ENSAOCG00000004247)	slc25a16 (ENSAOCG00000004314)	ENSAOCG00000004330	eif4e1c (ENSAOCG00000004344)	si:dkey-228d14.5 (ENSAOCG00000004352) ##22	zgc:110319 (ENSAOCG00000004360)	ccar1 (ENSAOCG00000004413)	stox1 (ENSAOCG00000004430)	si:ch211-198a12.6 (ENSAOCG00000004437)	zgc:154058 (ENSAOCG00000004448) ##22	mat1a (ENSAOCG00000004480)	ENSAOCG00000002093	ENSAOCG00000004510	ENSAOCG00000004523	ENSAOCG00000004534	sfxn3 (ENSAOCG00000004562)	ENSAOCG00000004571	pdzd7a (ENSAOCG00000004604)	lzts2a (ENSAOCG00000004622)	SEMA4G (ENSAOCG00000004667)	tp53bp2a (ENSAOCG00000002792)	XPO5 (ENSAOCG00000004757)	ENSAOCG00000004772	EFEMP1 (ENSAOCG00000004793)	MARK1 (ENSAOCG00000004828)
Orange clownfish	MODERN SPECIES	12	pgam1a (ENSAPEG00000014092)	ENSAPEG00000014065	ENSAPEG00000013906	zfand4 (ENSAPEG00000013860)	marchf8 (ENSAPEG00000013815)	alox5a (ENSAPEG00000013393)	slc25a16 (ENSAPEG00000013338)	ENSAPEG00000013312	eif4e1c (ENSAPEG00000013289)	si:dkey-228d14.5 (ENSAPEG00000013274) ##22	zgc:110319 (ENSAPEG00000013265)	ccar1 (ENSAPEG00000013204)	stox1 (ENSAPEG00000013192)	si:ch211-198a12.6 (ENSAPEG00000013186)	ENSAPEG00000013175	zgc:154058 (ENSAPEG00000013165) ##22	mat1a (ENSAPEG00000013131)	ENSAPEG00000013115	ENSAPEG00000013092	ENSAPEG00000013074	ENSAPEG00000013050	KCNMA1 (ENSAPEG00000013012)	sfxn3 (ENSAPEG00000012927)	ENSAPEG00000012910	pdzd7a (ENSAPEG00000012870)	lzts2a (ENSAPEG00000012853)	SEMA4G (ENSAPEG00000012839)	tp53bp2a (ENSAPEG00000012810)	XPO5 (ENSAPEG00000012728)	ENSAPEG00000012695	EFEMP1 (ENSAPEG00000012675)
Spiny chromis	MODERN SPECIES	77	pgam1a (ENSAPOG00000019913)	ENSAPOG00000019887	ENSAPOG00000019862	zfand4 (ENSAPOG00000019766)	marchf8 (ENSAPOG00000019743)	alox5a (ENSAPOG00000019693)	slc25a16 (ENSAPOG00000000916)	ENSAPOG00000019541	eif4e1c (ENSAPOG00000019534)	si:dkey-228d14.5 (ENSAPOG00000019507) ##22	zgc:110319 (ENSAPOG00000019439)	ccar1 (ENSAPOG00000019427)	stox1 (ENSAPOG00000019295)	si:ch211-198a12.6 (ENSAPOG00000019286)	ENSAPOG00000019280	zgc:154058 (ENSAPOG00000019271) ##22	mat1a (ENSAPOG00000019251)	ENSAPOG00000019189	ENSAPOG00000019168	ENSAPOG00000019122	ENSAPOG00000019112	sfxn3 (ENSAPOG00000019098)	pdzd7a (ENSAPOG00000019047)	ENSAPOG00000018977	lzts2a (ENSAPOG00000018963)	SEMA4G (ENSAPOG00000018948)	tp53bp2a (ENSAPOG00000018938)	XPO5 (ENSAPOG00000018844)	ENSAPOG00000018595	EFEMP1 (ENSAPOG00000018569)
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000177859	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134.b	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134.b	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134.b	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000165336.a.a.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134.b	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000165336.a.a.b	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134.b	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Eastern happy	MODERN SPECIES	4	ENSACLG00000010571	ENSACLG00000010645	zfand4 (ENSACLG00000010831)	marchf8 (ENSACLG00000010899)	ENSACLG00000011002	alox5a (ENSACLG00000011007)	slc25a16 (ENSACLG00000011057)	TET1 (ENSACLG00000011097)	eif4e1c (ENSACLG00000011119)	si:dkey-228d14.5 (ENSACLG00000011145) ##22	zgc:110319 (ENSACLG00000011165)	ccar1 (ENSACLG00000011175)	stox1 (ENSACLG00000011234)	si:ch211-198a12.6 (ENSACLG00000011238)	ENSACLG00000011241	zgc:154058 (ENSACLG00000011435) ##22	mat1a (ENSACLG00000011447)	ENSACLG00000011455	ENSACLG00000011469	ENSACLG00000011475	sfxn3 (ENSACLG00000011485)	pdzd7a (ENSACLG00000011498)	ENSACLG00000011521	lzts2a (ENSACLG00000011524)	SEMA4G (ENSACLG00000011543)	tp53bp2a (ENSACLG00000011575)	XPO5 (ENSACLG00000011682)	ENSACLG00000011750	EFEMP1 (ENSACLG00000011850)	MARK1 (ENSACLG00000011894)	lgi1a (ENSACLG00000012029)
Zebra mbuna	MODERN SPECIES	1095	pgam1a (ENSMZEG00005027718)	ENSMZEG00005027714	ENSMZEG00005027709	zfand4 (ENSMZEG00005027704)	marchf8 (ENSMZEG00005027700)	alox5a (ENSMZEG00005027695)	slc25a16 (ENSMZEG00005027692)	TET1 (ENSMZEG00005027690)	eif4e1c (ENSMZEG00005027687)	si:dkey-228d14.5 (ENSMZEG00005027686) ##22	zgc:110319 (ENSMZEG00005027685)	ccar1 (ENSMZEG00005027683)	stox1 (ENSMZEG00005027681)	si:ch211-198a12.6 (ENSMZEG00005027680)	ENSMZEG00005027679	zgc:154058 (ENSMZEG00005027678) ##22	mat1a (ENSMZEG00005027676)	ENSMZEG00005027675	selenou1a (ENSMZEG00005027673)	ENSMZEG00005027670	ENSMZEG00005027667	sfxn3 (ENSMZEG00005027664)	ENSMZEG00005027662	pdzd7a (ENSMZEG00005027660)	lzts2a (ENSMZEG00005027659)	SEMA4G (ENSMZEG00005027657)	tp53bp2a (ENSMZEG00005027654)	XPO5 (ENSMZEG00005027653)	ENSMZEG00005027652	EFEMP1 (ENSMZEG00005027647)	MARK1 (ENSMZEG00005027643)
P. nyererei	MODERN SPECIES	431	pgam1a (ENSPNYG00000007741)	ENSPNYG00000007729	ENSPNYG00000007646	zfand4 (ENSPNYG00000007604)	marchf8 (ENSPNYG00000007575)	alox5a (ENSPNYG00000007540)	slc25a16 (ENSPNYG00000007500)	TET1 (ENSPNYG00000007484)	eif4e1c (ENSPNYG00000007444)	si:dkey-228d14.5 (ENSPNYG00000007428) ##22	zgc:110319 (ENSPNYG00000007389)	ccar1 (ENSPNYG00000007300)	stox1 (ENSPNYG00000007282)	si:ch211-198a12.6 (ENSPNYG00000007273)	ENSPNYG00000007254	zgc:154058 (ENSPNYG00000007209) ##22	mat1a (ENSPNYG00000007167)	ENSPNYG00000007147	ENSPNYG00000007130	ENSPNYG00000007109	sfxn3 (ENSPNYG00000007059)
Burton s mouthbrooder	MODERN SPECIES	275	pgam1a (ENSHBUG00000023233)	ENSHBUG00000023217	ENSHBUG00000023180	zfand4 (ENSHBUG00000023124)	marchf8 (ENSHBUG00000023102)	alox5a (ENSHBUG00000023049)	slc25a16 (ENSHBUG00000022972)	TET1 (ENSHBUG00000022943)	eif4e1c (ENSHBUG00000022939)	si:dkey-228d14.5 (ENSHBUG00000022915) ##22	zgc:110319 (ENSHBUG00000022908)	ccar1 (ENSHBUG00000022896)	stox1 (ENSHBUG00000022770)	si:ch211-198a12.6 (ENSHBUG00000022762)	ENSHBUG00000022756	zgc:154058 (ENSHBUG00000022736) ##22	mat1a (ENSHBUG00000000906)	selenou1a (ENSHBUG00000022668)	ENSHBUG00000022600	ENSHBUG00000022575	sfxn3 (ENSHBUG00000022558)	pdzd7a (ENSHBUG00000000793)	ENSHBUG00000022469	lzts2a (ENSHBUG00000022456)	SEMA4G (ENSHBUG00000022418)	tp53bp2a (ENSHBUG00000022395)	XPO5 (ENSHBUG00000022345)	ENSHBUG00000022120	ENSHBUG00000022101	MARK1 (ENSHBUG00000022076)	lgi1a (ENSHBUG00000022006)
Lyretail cichlid	MODERN SPECIES	295	ENSNBRG00000021015	pgam1a (ENSNBRG00000021002)	ENSNBRG00000020995	ENSNBRG00000020927	zfand4 (ENSNBRG00000020908)	marchf8 (ENSNBRG00000020900)	alox5a (ENSNBRG00000020869)	slc25a16 (ENSNBRG00000020851)	TET1 (ENSNBRG00000020812)	eif4e1c (ENSNBRG00000020784)	si:dkey-228d14.5 (ENSNBRG00000020761) ##22	zgc:110319 (ENSNBRG00000020752)	ccar1 (ENSNBRG00000020668)	stox1 (ENSNBRG00000020614)	si:ch211-198a12.6 (ENSNBRG00000020608)	zgc:154058 (ENSNBRG00000020577) ##22	mat1a (ENSNBRG00000020548)	ENSNBRG00000020536	ENSNBRG00000020532	selenou1a (ENSNBRG00000020482)	sfxn3 (ENSNBRG00000020459)	ENSNBRG00000020450	pdzd7a (ENSNBRG00000020407)	lzts2a (ENSNBRG00000020378)	SEMA4G (ENSNBRG00000020332)	tp53bp2a (ENSNBRG00000020264)	XPO5 (ENSNBRG00000020176)	ENSNBRG00000020149	EFEMP1 (ENSNBRG00000020111)	MARK1 (ENSNBRG00000020086)	lgi1a (ENSNBRG00000019995)
Nile tilapia	MODERN SPECIES	4	ENSONIG00000018368	zfand4 (ENSONIG00000018374)	marchf8 (ENSONIG00000028453)	alox5a (ENSONIG00000018377)	slc25a16 (ENSONIG00000018396)	TET1 (ENSONIG00000033407)	ENSONIG00000041501	eif4e1c (ENSONIG00000018400)	ENSONIG00000018370	si:dkey-228d14.5 (ENSONIG00000018414) ##22	zgc:110319 (ENSONIG00000041926)	ccar1 (ENSONIG00000018419)	stox1 (ENSONIG00000018431)	si:ch211-198a12.6 (ENSONIG00000021241)	ENSONIG00000018432	zgc:154058 (ENSONIG00000018436) ##22	mat1a (ENSONIG00000034044)	selenou1a (ENSONIG00000039838)	ENSONIG00000038904	ENSONIG00000042100	sfxn3 (ENSONIG00000018442)	ENSONIG00000031457	ENSONIG00000041166	pdzd7a (ENSONIG00000018448)	lzts2a (ENSONIG00000039935)	SEMA4G (ENSONIG00000018453)	tp53bp2a (ENSONIG00000018457)	XPO5 (ENSONIG00000018463)	ENSONIG00000041460	EFEMP1 (ENSONIG00000018466)	MARK1 (ENSONIG00000018468)
Midas cichlid	MODERN SPECIES	452	ENSACIG00000021489	ENSACIG00000021475	ENSACIG00000021418	zfand4 (ENSACIG00000021402)	marchf8 (ENSACIG00000021390)	alox5a (ENSACIG00000021356)	slc25a16 (ENSACIG00000021324)	ENSACIG00000021268	eif4e1c (ENSACIG00000021242)	si:dkey-228d14.5 (ENSACIG00000021231) ##22	zgc:110319 (ENSACIG00000021207)	ccar1 (ENSACIG00000021164)	stox1 (ENSACIG00000021117)	si:ch211-198a12.6 (ENSACIG00000021106)	ENSACIG00000021103	zgc:154058 (ENSACIG00000021092) ##22	mat1a (ENSACIG00000021076)	ENSACIG00000021068	ENSACIG00000021053	selenou1a (ENSACIG00000021029)	sfxn3 (ENSACIG00000021016)	ENSACIG00000021006	pdzd7a (ENSACIG00000020975)	lzts2a (ENSACIG00000020939)	SEMA4G (ENSACIG00000020904)	tp53bp2a (ENSACIG00000020868)	XPO5 (ENSACIG00000020796)	ENSACIG00000020773	EFEMP1 (ENSACIG00000020751)	ENSACIG00000020716	lgi1a (ENSACIG00000020700)
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b
Oryzias	ANCESTRAL SPECIES	6	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d	ENSGT00940000154741.c	ENSGT00390000003652.c.b
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00510000049375	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000173563	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d	ENSGT00940000175836	ENSGT00940000154741.c
Japanese Medaka HdrR	MODERN SPECIES	6	marveld1 (ENSORLG00000027726)	pgam1a (ENSORLG00000007592)	ENSORLG00000026750	ENSORLG00000007565	zfand4 (ENSORLG00000007496)	marchf8 (ENSORLG00000007479)	alox5a (ENSORLG00000007461)	slc25a16 (ENSORLG00000026181)	TET1 (ENSORLG00000026069)	eif4e1c (ENSORLG00000019400)	si:dkey-228d14.5 (ENSORLG00000019392) ##22	zgc:110319 (ENSORLG00000029904)	ccar1 (ENSORLG00000007436)	stox1 (ENSORLG00000026324)	si:ch211-198a12.6 (ENSORLG00000007397)	zgc:154058 (ENSORLG00000007393) ##22	mat1a (ENSORLG00000007386)	ENSORLG00000007348	sfxn3 (ENSORLG00000007337)	pdzd7a (ENSORLG00000007317)	lzts2a (ENSORLG00000007311)	SEMA4G (ENSORLG00000007299)	tp53bp2a (ENSORLG00000007284)	XPO5 (ENSORLG00000007230)	ENSORLG00000030354	EFEMP1 (ENSORLG00000007168)	MARK1 (ENSORLG00000007134)	lgi1a (ENSORLG00000007115)	ENSORLG00000007095	ENSORLG00000007086	ENSORLG00000006956
Chinese medaka	MODERN SPECIES	557	ENSOSIG00000005059	marveld1 (ENSOSIG00000005057)	pgam1a (ENSOSIG00000005056)	ENSOSIG00000005055	ENSOSIG00000005053	zfand4 (ENSOSIG00000005048)	marchf8 (ENSOSIG00000005042)	alox5a (ENSOSIG00000003843)	slc25a16 (ENSOSIG00000003791)	ENSOSIG00000003776	eif4e1c (ENSOSIG00000003757)	si:dkey-228d14.5 (ENSOSIG00000023351) ##22	ccar1 (ENSOSIG00000023348)	stox1 (ENSOSIG00000023341)	ENSOSIG00000023333	zgc:154058 (ENSOSIG00000023328) ##22	mat1a (ENSOSIG00000023325)	selenou1a (ENSOSIG00000023320)	sfxn3 (ENSOSIG00000023316)	pdzd7a (ENSOSIG00000023310)	lzts2a (ENSOSIG00000023306)	SEMA4G (ENSOSIG00000023303)	tp53bp2a (ENSOSIG00000023290)	XPO5 (ENSOSIG00000023223)	ENSOSIG00000023202	EFEMP1 (ENSOSIG00000023192)	MARK1 (ENSOSIG00000022881)	ENSOSIG00000022833	lgi1a (ENSOSIG00000022831)	ENSOSIG00000022828	chata (ENSOSIG00000022394)
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d	ENSGT00940000154741.c	ENSGT00390000003652.c.b	ENSGT01060000248556.A.b.a
Indian medaka	MODERN SPECIES	27	pgam1a (ENSOMEG00000003552)	ENSOMEG00000003591	ENSOMEG00000003742	zfand4 (ENSOMEG00000003785)	marchf8 (ENSOMEG00000003833)	alox5a (ENSOMEG00000003860)	slc25a16 (ENSOMEG00000003877)	TET1 (ENSOMEG00000003894)	eif4e1c (ENSOMEG00000003911)	si:dkey-228d14.5 (ENSOMEG00000003916) ##22	zgc:110319 (ENSOMEG00000003938)	ccar1 (ENSOMEG00000003998)	stox1 (ENSOMEG00000004013)	si:ch211-198a12.6 (ENSOMEG00000004023)	ENSOMEG00000004030	zgc:154058 (ENSOMEG00000004041) ##22	mat1a (ENSOMEG00000004064)	selenou1a (ENSOMEG00000004119)	sfxn3 (ENSOMEG00000004157)	pdzd7a (ENSOMEG00000004184)	lzts2a (ENSOMEG00000000865)	SEMA4G (ENSOMEG00000004250)	tp53bp2a (ENSOMEG00000004305)	XPO5 (ENSOMEG00000004338)	ENSOMEG00000004355	ENSOMEG00000004372	MARK1 (ENSOMEG00000004402)	lgi1a (ENSOMEG00000004417)	ENSOMEG00000004433	MYOF (ENSOMEG00000004484)	PARG (ENSOMEG00000004528)
Javanese ricefish	MODERN SPECIES	6	ENSOJAG00000012965	ENSOJAG00000012919	zfand4 (ENSOJAG00000012892)	marchf8 (ENSOJAG00000012830)	ENSOJAG00000012795	alox5a (ENSOJAG00000012713)	slc25a16 (ENSOJAG00000012616)	TET1 (ENSOJAG00000012552)	eif4e1c (ENSOJAG00000012509)	si:dkey-228d14.5 (ENSOJAG00000012495) ##22	zgc:110319 (ENSOJAG00000012476)	ccar1 (ENSOJAG00000011851)	stox1 (ENSOJAG00000011811)	si:ch211-198a12.6 (ENSOJAG00000011802)	ENSOJAG00000011794	zgc:154058 (ENSOJAG00000011791) ##22	mat1a (ENSOJAG00000011731)	selenou1a (ENSOJAG00000011677)	sfxn3 (ENSOJAG00000011652)	pdzd7a (ENSOJAG00000011637)	lzts2a (ENSOJAG00000011631)	SEMA4G (ENSOJAG00000011537)	tp53bp2a (ENSOJAG00000010699)	XPO5 (ENSOJAG00000010478)	EFEMP1 (ENSOJAG00000010366)	MARK1 (ENSOJAG00000008103)	lgi1a (ENSOJAG00000007784)	ENSOJAG00000007773	ENSOJAG00000002659	chata (ENSOJAG00000002568)	slc18a3a (ENSOJAG00000002556)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00950000185388	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000170691	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935.d	ENSGT00940000158935.c	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d
NAME_6	ANCESTRAL SPECIES	25	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935.d	ENSGT00940000158935.c	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00510000047961.d	ENSGT00940000154741.c
Amazon molly	MODERN SPECIES	438	ENSPFOG00000002106	ENSPFOG00000002174	zfand4 (ENSPFOG00000002464)	marchf8 (ENSPFOG00000002514)	alox5a (ENSPFOG00000002570)	slc25a16 (ENSPFOG00000002699)	ENSPFOG00000002780	ENSPFOG00000024349	eif4e1c (ENSPFOG00000002854)	si:dkey-228d14.5 (ENSPFOG00000002941) ##22	zgc:110319 (ENSPFOG00000003062)	ccar1 (ENSPFOG00000003164)	stox1 (ENSPFOG00000003435)	si:ch211-198a12.6 (ENSPFOG00000020636)	ENSPFOG00000003478	zgc:154058 (ENSPFOG00000003582) ##22	mat1a (ENSPFOG00000003729)	sfxn3 (ENSPFOG00000003891)	selenou1a (ENSPFOG00000021824)	pdzd7a (ENSPFOG00000004044)	lzts2a (ENSPFOG00000004153)	SEMA4G (ENSPFOG00000004216)	tp53bp2a (ENSPFOG00000004313)	XPO5 (ENSPFOG00000004497)	EFEMP1 (ENSPFOG00000005044)	MARK1 (ENSPFOG00000005142)	lgi1a (ENSPFOG00000005432)	ENSPFOG00000023906	MYOF (ENSPFOG00000005518)	ENSPFOG00000006013	chata (ENSPFOG00000006030)
Sailfin molly	MODERN SPECIES	53									ENSPLAG00000009632	eif4e1c (ENSPLAG00000009606)	si:dkey-228d14.5 (ENSPLAG00000009471) ##22	zgc:110319 (ENSPLAG00000009457)	ccar1 (ENSPLAG00000000212)	stox1 (ENSPLAG00000009391)	si:ch211-198a12.6 (ENSPLAG00000009322)	zgc:154058 (ENSPLAG00000009308) ##22	mat1a (ENSPLAG00000009296)	ENSPLAG00000009276	ENSPLAG00000009258	sfxn3 (ENSPLAG00000009236)	pdzd7a (ENSPLAG00000009209)	ENSPLAG00000000199	lzts2a (ENSPLAG00000009165)	SEMA4G (ENSPLAG00000000191)	tp53bp2a (ENSPLAG00000009087)	XPO5 (ENSPLAG00000009067)	ENSPLAG00000008951	MARK1 (ENSPLAG00000008931)	lgi1a (ENSPLAG00000008918)	ENSPLAG00000008836	MYOF (ENSPLAG00000008810)
Guppy	MODERN SPECIES	445	marveld1 (ENSPREG00000019221)	ENSPREG00000019215	ENSPREG00000019207	ENSPREG00000019193	zfand4 (ENSPREG00000019165)	marchf8 (ENSPREG00000019096)	alox5a (ENSPREG00000019048)	slc25a16 (ENSPREG00000019024)	ENSPREG00000018976	eif4e1c (ENSPREG00000018571)	si:dkey-228d14.5 (ENSPREG00000018494) ##22	zgc:110319 (ENSPREG00000018448)	ccar1 (ENSPREG00000018399)	stox1 (ENSPREG00000018333)	si:ch211-198a12.6 (ENSPREG00000018311)	zgc:154058 (ENSPREG00000018290) ##22	mat1a (ENSPREG00000018253)	selenou1a (ENSPREG00000018234)	sfxn3 (ENSPREG00000018212)	ENSPREG00000018206	pdzd7a (ENSPREG00000018173)	lzts2a (ENSPREG00000018138)	SEMA4G (ENSPREG00000018115)	tp53bp2a (ENSPREG00000018046)	XPO5 (ENSPREG00000017998)	ENSPREG00000017964	MARK1 (ENSPREG00000017931)	lgi1a (ENSPREG00000017899)	MYOF (ENSPREG00000017825)	ENSPREG00000017785	chata (ENSPREG00000017766)
Platyfish	MODERN SPECIES	14	pgam1a (ENSXMAG00000002644)	ENSXMAG00000002647	ENSXMAG00000002655	zfand4 (ENSXMAG00000002677)	marchf8 (ENSXMAG00000028080)	alox5a (ENSXMAG00000002683)	slc25a16 (ENSXMAG00000002705)	ENSXMAG00000021487	eif4e1c (ENSXMAG00000023567)	si:dkey-228d14.5 (ENSXMAG00000021405) ##22	zgc:110319 (ENSXMAG00000002755)	ccar1 (ENSXMAG00000002765)	stox1 (ENSXMAG00000021387)	si:ch211-198a12.6 (ENSXMAG00000002795)	ENSXMAG00000002798	zgc:154058 (ENSXMAG00000022378) ##22	mat1a (ENSXMAG00000002811)	ENSXMAG00000023177	ENSXMAG00000027388	sfxn3 (ENSXMAG00000002825)	pdzd7a (ENSXMAG00000002852)	lzts2a (ENSXMAG00000002857)	sgtb (ENSXMAG00000028476)	ENSXMAG00000022640	SEMA4G (ENSXMAG00000002862)	tp53bp2a (ENSXMAG00000002863)	ENSXMAG00000022576	XPO5 (ENSXMAG00000002870)	EFEMP1 (ENSXMAG00000002888)	MARK1 (ENSXMAG00000002897)	lgi1a (ENSXMAG00000002935)
NAME_4	ANCESTRAL SPECIES	2	ENSGT00530000064017.a	ENSGT00940000170691	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00940000154741.c	ENSGT00390000003652.c.b
Mummichog	MODERN SPECIES	2448	marveld1 (ENSFHEG00000002216)	pgam1a (ENSFHEG00000002210)	ENSFHEG00000002203	ENSFHEG00000002187	zfand4 (ENSFHEG00000002161)	marchf8 (ENSFHEG00000002146)	alox5a (ENSFHEG00000002130)	slc25a16 (ENSFHEG00000002120)	TET1 (ENSFHEG00000002103)	eif4e1c (ENSFHEG00000002097)	ENSFHEG00000002091	zgc:110319 (ENSFHEG00000002083)	ccar1 (ENSFHEG00000002061)	stox1 (ENSFHEG00000023124)	si:ch211-198a12.6 (ENSFHEG00000023114)	zgc:154058 (ENSFHEG00000023108) ##22	mat1a (ENSFHEG00000023101)	ENSFHEG00000023054	ENSFHEG00000023041	sfxn3 (ENSFHEG00000023012)	ENSFHEG00000022951	pdzd7a (ENSFHEG00000022940)	lzts2a (ENSFHEG00000022873)	SEMA4G (ENSFHEG00000022854)	tp53bp2a (ENSFHEG00000022803)	XPO5 (ENSFHEG00000022609)	EFEMP1 (ENSFHEG00000022593)	MARK1 (ENSFHEG00000022582)	lgi1a (ENSFHEG00000022507)	MYOF (ENSFHEG00000022425)	ENSFHEG00000022286
Sheepshead minnow	MODERN SPECIES	113	ENSCVAG00000013659	ENSCVAG00000013672	ENSCVAG00000013705	zfand4 (ENSCVAG00000013710)	marchf8 (ENSCVAG00000013730)	alox5a (ENSCVAG00000013780)	slc25a16 (ENSCVAG00000013805)	TET1 (ENSCVAG00000013819)	eif4e1c (ENSCVAG00000013853)	si:dkey-228d14.5 (ENSCVAG00000000350) ##22	zgc:110319 (ENSCVAG00000013925)	ccar1 (ENSCVAG00000014095)	stox1 (ENSCVAG00000014109)	si:ch211-198a12.6 (ENSCVAG00000014114)	ENSCVAG00000014121	zgc:154058 (ENSCVAG00000014126) ##22	mat1a (ENSCVAG00000014150)	ENSCVAG00000014164	ENSCVAG00000014176	sfxn3 (ENSCVAG00000014222)	ENSCVAG00000014234	pdzd7a (ENSCVAG00000014294)	lzts2a (ENSCVAG00000014313)	SEMA4G (ENSCVAG00000014361)	tp53bp2a (ENSCVAG00000014396)	XPO5 (ENSCVAG00000014491)	EFEMP1 (ENSCVAG00000014505)	MARK1 (ENSCVAG00000014596)	lgi1a (ENSCVAG00000014630)	MYOF (ENSCVAG00000014748)	ENSCVAG00000014763
Aplocheiloidei	ANCESTRAL SPECIES	43	ENSGT00950000182926.b.d.a.a.b	ENSGT00530000064017.a	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00940000153463.b.a	ENSGT00940000153408.A	ENSGT00940000157837.c	ENSGT00940000157560.d.b	ENSGT00940000164645.a	ENSGT00940000154741.c
Mangrove rivulus	MODERN SPECIES	3	pgam1a (ENSKMAG00000005032)	ENSKMAG00000005005	ENSKMAG00000004942	zfand4 (ENSKMAG00000004916)	marchf8 (ENSKMAG00000004883)	alox5a (ENSKMAG00000004642)	slc25a16 (ENSKMAG00000004595)	TET1 (ENSKMAG00000004567)	eif4e1c (ENSKMAG00000004557)	si:dkey-228d14.5 (ENSKMAG00000004541) ##22	zgc:110319 (ENSKMAG00000004521)	ccar1 (ENSKMAG00000004397)	stox1 (ENSKMAG00000004372)	si:ch211-198a12.6 (ENSKMAG00000004363)	ENSKMAG00000004349	zgc:154058 (ENSKMAG00000004343) ##22	mat1a (ENSKMAG00000004294)	selenou1a (ENSKMAG00000004253)	sfxn3 (ENSKMAG00000004212)	pdzd7a (ENSKMAG00000004152)	lzts2a (ENSKMAG00000004143)	SEMA4G (ENSKMAG00000004117)	tp53bp2a (ENSKMAG00000004076)	XPO5 (ENSKMAG00000004007)	ENSKMAG00000003966	EFEMP1 (ENSKMAG00000003944)	MARK1 (ENSKMAG00000003869)	lgi1a (ENSKMAG00000003817)	MYOF (ENSKMAG00000003674)	ppp4r3b (ENSKMAG00000003648)	cfap36 (ENSKMAG00000003627)
Turquoise killifish	MODERN SPECIES	1612	ENSNFUG00015018559	ZFAND4 (ENSNFUG00015018581)	MARCH8 (ENSNFUG00015018583)	alox5a (ENSNFUG00015018618)	ENSNFUG00015002938	SLC25A16 (ENSNFUG00015002944)	ENSNFUG00015002954	eif4e1c (ENSNFUG00015002958)	ENSNFUG00015002961	Nfu_g_1_014361 (ENSNFUG00015002966)	ccar1 (ENSNFUG00015002979)	ENSNFUG00015003002	si:ch211-198a12.6 (ENSNFUG00015003006)	STOX1 (ENSNFUG00015003009)	ENSNFUG00015003013	zgc:154058 (ENSNFUG00015003019) ##22	mat1a (ENSNFUG00015003048)	ENSNFUG00015003063	ENSNFUG00015003068	SFXN3 (ENSNFUG00015003071)	pdzd7a (ENSNFUG00015003083)	ENSNFUG00015003094	LZTS2A (ENSNFUG00015003096)	SEMA4G (ENSNFUG00015003098)	ENSNFUG00015003102	TP53BP2 (ENSNFUG00015003120)	XPO5 (ENSNFUG00015003230)	EFEMP1 (ENSNFUG00015003355)	ENSNFUG00015003363	MARK1 (ENSNFUG00015003374)	LGI1A (ENSNFUG00015003477)
Otomorpha	ANCESTRAL SPECIES	10	ENSGT00940000161685.A.b	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00390000009747	ENSGT00940000157919.a.a	ENSGT00940000158796	ENSGT00390000007726.a.a
Clupeiformes	ANCESTRAL SPECIES	284														ENSGT00940000156323.d	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000164872.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00390000009747	ENSGT00940000157919.b	ENSGT00940000155737.b	ENSGT00940000158796
Atlantic herring	MODERN SPECIES	4	ENSCHAG00000005765	ENSCHAG00000005757	ENSCHAG00000005716	GREM2 (ENSCHAG00000005708)	rgs7a (ENSCHAG00000005351)	kif11 (ENSCHAG00000005141)	slc22a15 (ENSCHAG00000005090)	cyp26c1 (ENSCHAG00000005069)	reep3a (ENSCHAG00000005061)	ENSCHAG00000005021	ENSCHAG00000004993	ENSCHAG00000004980	ENSCHAG00000004944	tlr4ba (ENSCHAG00000004588)	ENSCHAG00000004571	zgc:154058 (ENSCHAG00000004540) ##22	mat1a (ENSCHAG00000003665)	selenou1a (ENSCHAG00000003586)	ENSCHAG00000003568	ENSCHAG00000003531	sfxn3 (ENSCHAG00000003340)	ENSCHAG00000003308	pdzd7a (ENSCHAG00000003277)	lzts2a (ENSCHAG00000003255)	TWNK (ENSCHAG00000003234)	znhit1 (ENSCHAG00000003213)	SEMA4G (ENSCHAG00000002969)	ENSCHAG00000002897	sufu (ENSCHAG00000001799)	trim8a (ENSCHAG00000001725)	slc8a1b (ENSCHAG00000001685)
Denticle herring	MODERN SPECIES	11	PTPRE (ENSDCDG00000022163)	slka (ENSDCDG00000023363)	DNAH7 (ENSDCDG00000023756)	ENSDCDG00000024276	ENSDCDG00000024279	foxi1 (ENSDCDG00000024281)	dock1 (ENSDCDG00000024629)	INSYN2A (ENSDCDG00000031457)	ADAM12 (ENSDCDG00000031471)	CTBP2 (ENSDCDG00000031692)	mmp21 (ENSDCDG00000031771)	uros (ENSDCDG00000031773)	bccip (ENSDCDG00000031778)	dhx32a (ENSDCDG00000031780)	ENSDCDG00000031785	zgc:154058 (ENSDCDG00000031787) ##22	mat1a (ENSDCDG00000031794)	selenou1a (ENSDCDG00000031799)	cdh23 (ENSDCDG00000031852)	ENSDCDG00000032271	ybx1 (ENSDCDG00000032273)	vsir (ENSDCDG00000032275)	eif3s6ip (ENSDCDG00000032284)	dnajc12 (ENSDCDG00000032537)	cox5b2 (ENSDCDG00000032540)	HERC4 (ENSDCDG00000032560)	ENSDCDG00000032698	ENSDCDG00000032701	mlh1 (ENSDCDG00000032704)	lrrfip2 (ENSDCDG00000032716)	ENSDCDG00000032738
Otophysi	ANCESTRAL SPECIES	29	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000156323.d	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00390000004945	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000156323.d	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00390000004945	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b	ENSGT00940000153123.B
Channel catfish	MODERN SPECIES	22	ENSIPUG00000004596	ENSIPUG00000004606	marchf8 (ENSIPUG00000004619)	zfand4 (ENSIPUG00000004728)	Fam21 (ENSIPUG00000004769)	ALOX5 (ENSIPUG00000004930)	Slc25a16 (ENSIPUG00000004964)	tet1 (ENSIPUG00000005004)	eif4e1c (ENSIPUG00000005027)	si:dkey-228d14.5 (ENSIPUG00000005094) ##22	ccar1 (ENSIPUG00000005123)	STOX1 (ENSIPUG00000005320)	ENSIPUG00000005336	ENSIPUG00000005349	ENSIPUG00000005372	zgc:154058 (ENSIPUG00000005399) ##22	mat1a (ENSIPUG00000005424)	CKB (ENSIPUG00000005495)	selenou1a (ENSIPUG00000005592)	SFXN1 (ENSIPUG00000005638)	pdzd7a (ENSIPUG00000005667)	ENSIPUG00000005731	lzts2 (ENSIPUG00000005737)	SEMA4G (ENSIPUG00000005749)	ENSIPUG00000005804	cpxm1 (ENSIPUG00000005829)	ENSIPUG00000005860	dcaf10 (ENSIPUG00000005878)	pomk (ENSIPUG00000005893)	ENSIPUG00000005905	zgc:123321 (ENSIPUG00000005913)
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000156323.d	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00390000004945	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b	ENSGT00940000153123.B
Characoidei	ANCESTRAL SPECIES	5	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c	ENSGT00950000183169.C	ENSGT00940000156323.d	ENSGT00990000210241	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000173380	ENSGT00940000165336.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00390000004945	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b	ENSGT00940000153123.B
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000001490	alox5a (ENSAMXG00000001474)	slc25a16 (ENSAMXG00000031377)	ENSAMXG00000029609	TET1 (ENSAMXG00000001451)	eif4e1c (ENSAMXG00000029997)	si:dkey-228d14.5 (ENSAMXG00000001412) ##22	zgc:110319 (ENSAMXG00000033105)	ccar1 (ENSAMXG00000001383)	stox1 (ENSAMXG00000001371)	si:ch211-198a12.6 (ENSAMXG00000026056)	ENSAMXG00000040191	ENSAMXG00000039931	ENSAMXG00000031125	ENSAMXG00000003023	zgc:154058 (ENSAMXG00000032149) ##22	mat1a (ENSAMXG00000038208)	ENSAMXG00000030039	ENSAMXG00000002979	sfxn3 (ENSAMXG00000041542)	pdzd7a (ENSAMXG00000002974)	ENSAMXG00000041591	lzts2a (ENSAMXG00000043976)	SEMA4G (ENSAMXG00000010720)	ENSAMXG00000041553	CPXM1 (ENSAMXG00000010769)	wdr32 (ENSAMXG00000038436)	pomk (ENSAMXG00000041445)	ENSAMXG00000039148	zgc:123321 (ENSAMXG00000010838)	si:dkey-33c12.4 (ENSAMXG00000010871)
Red-bellied piranha	MODERN SPECIES	425															ENSPNAG00000017812	zgc:154058 (ENSPNAG00000017842) ##22	mat1a (ENSPNAG00000017882)	ENSPNAG00000017890	ENSPNAG00000017919	sfxn3 (ENSPNAG00000017988)	ENSPNAG00000017997	pdzd7a (ENSPNAG00000018092)	lzts2a (ENSPNAG00000018144)	SEMA4G (ENSPNAG00000018162)	ENSPNAG00000018203	CPXM1 (ENSPNAG00000018228)	wdr32 (ENSPNAG00000018253)	pomk (ENSPNAG00000018280)	ENSPNAG00000018288	zgc:123321 (ENSPNAG00000018310)	ENSPNAG00000018365
Electric eel	MODERN SPECIES	461								eif4e1c (ENSEEEG00000014752)	si:dkey-228d14.5 (ENSEEEG00000014753) ##22	zgc:110319 (ENSEEEG00000014754)	ccar1 (ENSEEEG00000014756)	stox1 (ENSEEEG00000014758)	si:ch211-198a12.6 (ENSEEEG00000014759)	ENSEEEG00000014761	ENSEEEG00000014763	zgc:154058 (ENSEEEG00000014765) ##22	mat1a (ENSEEEG00000014771)	ENSEEEG00000014779	ENSEEEG00000014781	sfxn3 (ENSEEEG00000014787)	pdzd7a (ENSEEEG00000014845)	ENSEEEG00000014846	lzts2a (ENSEEEG00000014847)	ENSEEEG00000014848	ENSEEEG00000014849	SEMA4G (ENSEEEG00000014850)	CPXM1 (ENSEEEG00000014861)	wdr32 (ENSEEEG00000014868)	pomk (ENSEEEG00000014871)	zgc:123321 (ENSEEEG00000014873)	si:dkey-33c12.3 (ENSEEEG00000014881)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156111.d	ENSGT00940000157520	ENSGT00940000158935	ENSGT00940000166192	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166680	ENSGT00530000063672.a	ENSGT00520000055589.c.g	ENSGT00950000183169.C	ENSGT00940000156323.d.c.b	ENSGT00940000156323.d.c.a	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.a	ENSGT00940000164872.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b	ENSGT00940000157186.d	ENSGT00530000064017.a	ENSGT00940000156141.A	ENSGT00390000012666	ENSGT00390000004945	ENSGT00940000170259	ENSGT00940000161036.A.f	ENSGT00940000167020.a.b	ENSGT00940000165724
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	96	ENSGT00940000155716.q	ENSGT00940000153997.b.b.a	ENSGT00940000156111.d.a	ENSGT00940000157520.d	ENSGT00940000158935.a	ENSGT00940000166192.c.a	ENSGT01030000234578.A.b.a.b.d ##22	ENSGT00940000166680.a	ENSGT00530000063672.a.t	ENSGT00520000055589.c.g.a	ENSGT00950000183169.C	ENSGT00940000156323.d.c.b.b.b	ENSGT00940000156323.d.c.a.a	ENSGT00990000210241	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.c ##22	ENSGT00950000183185.c.a.b.a.a.d	ENSGT00940000164872.b.a	ENSGT01030000234641.b.a.b.a.a.a	ENSGT00950000183002.C.c.a.b	ENSGT00940000154078.a.a.b.c	ENSGT00940000157186.d.b	ENSGT00530000064017.a.c	ENSGT00940000156141.A	ENSGT00390000012666.e	ENSGT00390000012666.f	ENSGT00390000004945	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b	ENSGT00940000154427.A.f.b	ENSGT00940000170259
Goldfish	MODERN SPECIES	4	ENSCARG00000048081	vdac2 (ENSCARG00000046848)	marchf8 (ENSCARG00000046806)	zfand4 (ENSCARG00000046789)	ENSCARG00000046670	alox5a (ENSCARG00000046461)	slc25a16 (ENSCARG00000046419)	ENSCARG00000046374	eif4e1c (ENSCARG00000046219)	si:dkey-228d14.5 (ENSCARG00000046193) ##22	zgc:110319 (ENSCARG00000046178)	ccar1 (ENSCARG00000045370)	stox1 (ENSCARG00000025606)	si:ch211-198a12.6 (ENSCARG00000025600)	tlr4bb (ENSCARG00000025587)	zgc:154058 (ENSCARG00000025576) ##22	mat1a (ENSCARG00000024910)	selenou1a (ENSCARG00000024869)	sfxn3 (ENSCARG00000024807)	lzts2a (ENSCARG00000024778)	SEMA4G (ENSCARG00000024461)	ENSCARG00000024433	CPXM1 (ENSCARG00000024094)	wdr32 (ENSCARG00000024072)	ENSCARG00000024064	bbof1 (ENSCARG00000024024)	si:dkey-33c12.4 (ENSCARG00000023977)	ENSCARG00000023938	mrps26 (ENSCARG00000023925)	pank2 (ENSCARG00000023916)	ENSCARG00000023911
Cyprininae_a	ANCESTRAL SPECIES	53	ENSGT00940000158282.d.b	ENSGT00940000155716.q	ENSGT00940000153997.b.b.a	ENSGT00940000156111.d.a	ENSGT00940000157520.d	ENSGT00940000158935.a	ENSGT00940000166192.d	ENSGT00940000166192.c.a	ENSGT01030000234578.A.b.a.b.d ##22	ENSGT00940000166680.a	ENSGT00530000063672.a.t	ENSGT00520000055589.c.g.a	ENSGT00950000183169.C.g	ENSGT00940000156323.d.c.b.b.b	ENSGT00940000154395.a.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.c ##22	ENSGT00950000183185.c.a.b.a.a.d	ENSGT00940000164872.b.a	ENSGT01030000234641.b.a.b.a.a.a	ENSGT00950000183002.C.c.a.b	ENSGT00940000154078.a.a.b.c	ENSGT00940000157186.d.b	ENSGT00530000064017.a.c	ENSGT00940000156141.A	ENSGT00390000012666.e	ENSGT00390000004945.e	ENSGT00940000154427.A.f.a	ENSGT00940000161036.A.f.a	ENSGT01070000253822.A.j.b	ENSGT00940000165724.b	ENSGT00390000008453.d
Common carp reference	MODERN SPECIES	18	ENSCCRG00000066354	ENSCCRG00000018637	ENSCCRG00000053806	alox5a (ENSCCRG00000060655)	slc25a16 (ENSCCRG00000003288)	TET1 (ENSCCRG00000054698)	ENSCCRG00000064054	eif4e1c (ENSCCRG00000063216)	si:dkey-228d14.5 (ENSCCRG00000056104) ##22	zgc:110319 (ENSCCRG00000081245)	ccar1 (ENSCCRG00000012353)	stox1 (ENSCCRG00000012492)	si:ch211-198a12.6 (ENSCCRG00000055010)	ENSCCRG00000012387	ENSCCRG00000012382	zgc:154058 (ENSCCRG00000062339) ##22	mat1a (ENSCCRG00000056386)	selenou1a (ENSCCRG00000028895)	sfxn3 (ENSCCRG00000052638)	pdzd7a (ENSCCRG00000005970)	ENSCCRG00000052637	lzts2a (ENSCCRG00000012981)	SEMA4G (ENSCCRG00000011189)	ENSCCRG00000053090	ENSCCRG00000048770	wdr32 (ENSCCRG00000049092)	pomk (ENSCCRG00000049095)	bbof1 (ENSCCRG00000081898)	si:dkey-33c12.4 (ENSCCRG00000019292)	ENSCCRG00000068754	si:dkey-33c12.3 (ENSCCRG00000047255)
Golden-line barbel	MODERN SPECIES	1465														tlr4bb (ENSSGRG00000045371)	ENSSGRG00000045369	zgc:154058 (ENSSGRG00000045368) ##22	mat1a (ENSSGRG00000045293)	selenou1a (ENSSGRG00000045287)	sfxn3 (ENSSGRG00000045228)	pdzd7a (ENSSGRG00000045222)	lzts2a (ENSSGRG00000045221)
Cyprininae	ANCESTRAL SPECIES	87	ENSGT00950000182869.e.a.a.q.d.a	ENSGT00940000158282.d.a.b	ENSGT00940000155716.r	ENSGT00940000153997.b.b.b	ENSGT00940000156111.d.b	ENSGT00940000157520.c	ENSGT00940000158935.b	ENSGT00940000166192.c.b	ENSGT01030000234578.A.b.a.b.c ##22	ENSGT00940000166680.b	ENSGT00530000063672.a.s	ENSGT00520000055589.c.g.b	ENSGT00940000156323.d.c.b.b.a	ENSGT00940000156323.d.c.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.d ##22	ENSGT00950000183185.c.a.b.a.a.c	ENSGT00940000164872.b.b	ENSGT01030000234641.b.a.b.a.a.b	ENSGT00950000183002.C.c.a.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b.d	ENSGT00940000157186.d.a	ENSGT00530000064017.a.d
Goldfish	MODERN SPECIES	31	marchf8 (ENSCARG00000027821)	zfand4 (ENSCARG00000027775)	ENSCARG00000027747	alox5a (ENSCARG00000027009)	slc25a16 (ENSCARG00000026948)	TET1 (ENSCARG00000026935)	eif4e1c (ENSCARG00000026813)	si:dkey-228d14.5 (ENSCARG00000026803) ##22	zgc:110319 (ENSCARG00000026798)	ccar1 (ENSCARG00000026508)	stox1 (ENSCARG00000026473)	ENSCARG00000026461	ENSCARG00000026447	ENSCARG00000026433	tlr4bb (ENSCARG00000026423)	zgc:154058 (ENSCARG00000026420) ##22	mat1a (ENSCARG00000025440)	ENSCARG00000025394	selenou1a (ENSCARG00000025375)	sfxn3 (ENSCARG00000025335)	ENSCARG00000025323	pdzd7a (ENSCARG00000025314)	lzts2a (ENSCARG00000025309)	SEMA4G (ENSCARG00000024580)	ENSCARG00000024538	hk1 (ENSCARG00000024100)	tacr2 (ENSCARG00000024065)	tspan15 (ENSCARG00000024027)	GFRA1 (ENSCARG00000023905)	apcs (ENSCARG00000023890)	ATRNL1 (ENSCARG00000023570)
Cyprininae_a	ANCESTRAL SPECIES	32	ENSGT00940000158282.d.a.b	ENSGT00940000155716.r	ENSGT00940000153997.b.b.b	ENSGT00940000156111.d.b	ENSGT00940000157520.c	ENSGT00940000158935.b	ENSGT00940000166192.c.b	ENSGT01030000234578.A.b.a.b.c ##22	ENSGT00940000166680.b	ENSGT00530000063672.a.s	ENSGT00520000055589.c.g.b	ENSGT00950000183169.C.h	ENSGT00940000156323.d.c.b.b.a	ENSGT00940000156323.d.c.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.d ##22	ENSGT00950000183185.c.a.b.a.a.c	ENSGT00940000164872.b.b	ENSGT01030000234641.b.a.b.a.a.b	ENSGT00950000183002.C.c.a.a	ENSGT00980000198953	ENSGT00940000154078.a.a.b.d	ENSGT00940000157186.d.a	ENSGT00530000064017.a.d	ENSGT00390000012666.f	ENSGT00390000004945.f	ENSGT00940000159219.a	ENSGT00940000153168.C.a.b	ENSGT00940000154427.A.f.b	ENSGT00940000170259	ENSGT00940000161036.A.f.b
Common carp reference	MODERN SPECIES	48	ENSCCRG00000011697	alox5a (ENSCCRG00000077726)	slc25a16 (ENSCCRG00000011658)	ENSCCRG00000012373	eif4e1c (ENSCCRG00000063429)	si:dkey-228d14.5 (ENSCCRG00000076991) ##22	zgc:110319 (ENSCCRG00000074371)	ccar1 (ENSCCRG00000013217)	stox1 (ENSCCRG00000082714)	si:ch211-198a12.6 (ENSCCRG00000080952)	ENSCCRG00000080229	ENSCCRG00000059050	ENSCCRG00000020975	tlr4bb (ENSCCRG00000056245)	ENSCCRG00000062444	zgc:154058 (ENSCCRG00000065412) ##22	mat1a (ENSCCRG00000079943)	selenou1a (ENSCCRG00000013043)	sfxn3 (ENSCCRG00000067180)	pdzd7a (ENSCCRG00000012984)	ENSCCRG00000012988	lzts2a (ENSCCRG00000081021)	SEMA4G (ENSCCRG00000024683)	ENSCCRG00000022176	wdr32 (ENSCCRG00000020159)	ENSCCRG00000072337	zgc:123321 (ENSCCRG00000049096)	bbof1 (ENSCCRG00000059896)	ENSCCRG00000072636	si:dkey-33c12.4 (ENSCCRG00000032613)	ENSCCRG00000049410
Golden-line barbel	MODERN SPECIES	44	ifit8 (ENSSGRG00000045818)	ENSSGRG00000045819	vdac2 (ENSSGRG00000045875)	marchf8 (ENSSGRG00000047925)	zfand4 (ENSSGRG00000047926)	ENSSGRG00000047927	alox5a (ENSSGRG00000047929)	ENSSGRG00000048033	eif4e1c (ENSSGRG00000048035)	si:dkey-228d14.5 (ENSSGRG00000048051) ##22	zgc:110319 (ENSSGRG00000048053)	ccar1 (ENSSGRG00000048054)	stox1 (ENSSGRG00000048057)	si:ch211-198a12.6 (ENSSGRG00000048059)	ENSSGRG00000048063	zgc:154058 (ENSSGRG00000048065) ##22	mat1a (ENSSGRG00000048068)	selenou1a (ENSSGRG00000048071)	sfxn3 (ENSSGRG00000048077)	ENSSGRG00000048143	ENSSGRG00000048144	lzts2a (ENSSGRG00000048149)	SEMA4G (ENSSGRG00000048150)	ENSSGRG00000048154	wdr32 (ENSSGRG00000048158)	pomk (ENSSGRG00000048159)	zgc:123321 (ENSSGRG00000048160)	bbof1 (ENSSGRG00000048161)	si:dkey-33c12.4 (ENSSGRG00000048165)	si:dkey-33c12.3 (ENSSGRG00000000091)	mrps26 (ENSSGRG00000000097)
Zebrafish	MODERN SPECIES	4	ENSDARG00000062532	alox5a (ENSDARG00000057273)	slc25a16 (ENSDARG00000057287)	TET1 (ENSDARG00000075230)	eif4e1c (ENSDARG00000012274)	zgc:110319 (ENSDARG00000021404)	si:dkey-228d14.5 (ENSDARG00000057440) ##22	ccar1 (ENSDARG00000074759)	stox1 (ENSDARG00000062593)	si:ch211-198a12.6 (ENSDARG00000074624)	tlr4ba (ENSDARG00000019742)	tlr4al (ENSDARG00000075671)	ENSDARG00000112942	tlr4bb (ENSDARG00000022048)	ENSDARG00000078254	zgc:154058 (ENSDARG00000069795) ##22	mat1a (ENSDARG00000039605)	selenou1a (ENSDARG00000057378)	sfxn3 (ENSDARG00000057374)	pdzd7a (ENSDARG00000076974)	lzts2a (ENSDARG00000074597)	eif3s10 (ENSDARG00000076815)	emx2 (ENSDARG00000039701)	RAB11FIP2 (ENSDARG00000101432)	fam204a (ENSDARG00000039699)	ENSDARG00000106606	ATRNL1 (ENSDARG00000077188)	apcs (ENSDARG00000045089)	gfra1a (ENSDARG00000099732)	CCDC172 (ENSDARG00000039937)	si:ch1073-126c3.2 (ENSDARG00000092858)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.b ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a.b ##22
Otophysi	ANCESTRAL SPECIES	154	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000158045.a	ENSGT00940000154430.d	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d	ENSGT00390000009853	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.b	ENSGT00940000169341	ENSGT00940000165336.a.a.a	ENSGT00940000164872.a	ENSGT00950000183002.B.b	ENSGT00940000154078.a.a.a	ENSGT00940000167571
Characiphysae	ANCESTRAL SPECIES	149	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000158045.a	ENSGT00940000154430.d	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d	ENSGT00390000009853	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.b
Characiphysae_b	ANCESTRAL SPECIES	484																ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.b
Characoidei	ANCESTRAL SPECIES	171	ENSGT00950000183091.A.a	ENSGT00730000114509	ENSGT00950000183001.a.a.d.a.a.a	ENSGT00940000156414	ENSGT00390000004719.b	ENSGT00630000089895	ENSGT00940000159002	ENSGT00530000063371.B.e	ENSGT00530000063474.A	ENSGT00940000168551	ENSGT00940000166669.b	ENSGT00940000159140.d	ENSGT00390000009853	ENSGT01050000244965.a.a	ENSGT01100000263529.a.a.a.a.a.a.a.b.b.a.b	ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00950000183185.c.a.b.a.b
Mexicana tetra	MODERN SPECIES	901									azin1b (ENSAMXG00000042545)	ARHGAP44 (ENSAMXG00000019438)	ndufb8 (ENSAMXG00000020446)	SEC31B (ENSAMXG00000020434)	chst3b (ENSAMXG00000029019)	zgc:92749 (ENSAMXG00000034182)	ENSAMXG00000004211	zgc:86738 (ENSAMXG00000031026) ##22	trim16 (ENSAMXG00000042638)	FADS6 (ENSAMXG00000004237)	ENSAMXG00000004242
Red-bellied piranha	MODERN SPECIES	542											mmp21 (ENSPNAG00000028943)	ENSPNAG00000028985	uros (ENSPNAG00000029052)	zgc:92749 (ENSPNAG00000029079)	ENSPNAG00000029122	zgc:86738 (ENSPNAG00000029138) ##22	ENSPNAG00000029178	ENSPNAG00000005401	ENSPNAG00000029475	trim16 (ENSPNAG00000029494)	ENSPNAG00000004636	ENSPNAG00000029589	ENSPNAG00000029641	vclb (ENSPNAG00000029689)	adkb (ENSPNAG00000007481)
Channel catfish	MODERN SPECIES	4	hmx2 (ENSIPUG00000002329)	hmx3 (ENSIPUG00000002335)	gpr26 (ENSIPUG00000002346)	cpxm2 (ENSIPUG00000002367)	CHST15 (ENSIPUG00000002375)	oat (ENSIPUG00000002393)	ENSIPUG00000002416	lhpp (ENSIPUG00000002423)	fam53b (ENSIPUG00000002445)	hpdl (ENSIPUG00000002460)	zranb1 (ENSIPUG00000002479)	ctbp2a (ENSIPUG00000002494)	mmp21 (ENSIPUG00000002534)	UROS (ENSIPUG00000002557)	zgc:92749 (ENSIPUG00000002576)	zgc:86738 (ENSIPUG00000002583) ##22	shbg (ENSIPUG00000002592)	ENSIPUG00000002604	Polr2a (ENSIPUG00000002613)	capg (ENSIPUG00000002689)	ENSIPUG00000002704	ENSIPUG00000002713	mfsd8 (ENSIPUG00000002729)	zcchc4 (ENSIPUG00000002789)	ENSIPUG00000002802	ENSIPUG00000002825	ABLIM2 (ENSIPUG00000002827)	ENSIPUG00000002851	afap1 (ENSIPUG00000002861)	ENSIPUG00000002933	MKX (ENSIPUG00000002944)
Cyprinoidei	ANCESTRAL SPECIES	268												ENSGT00940000166669.b	ENSGT00940000159140.d	ENSGT00390000009853	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.b ##22
Cyprininae	ANCESTRAL SPECIES	926																ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00940000164872.a	ENSGT00950000183002.B.b	ENSGT00940000165336.a.a.a	ENSGT00940000154078.a.a.a	ENSGT00940000167571.a
Goldfish	MODERN SPECIES	3	ENSCARG00000002279	znf668 (ENSCARG00000002275)	ENSCARG00000002268	cd37 (ENSCARG00000002261)	gall (ENSCARG00000002254)	valopb (ENSCARG00000002242)	gabrz (ENSCARG00000002231)	ENSCARG00000002222	SH2D4B (ENSCARG00000002161)	bms1 (ENSCARG00000001993)	mxtx2 (ENSCARG00000001942)	ENSCARG00000001930	ENSCARG00000017966	CDC42EP4 (ENSCARG00000017961)	ENSCARG00000017954	zgc:86738 (ENSCARG00000017947) ##22	ENSCARG00000017902	ENSCARG00000017884	ENSCARG00000017813	LZTS2 (ENSCARG00000017785)	ENSCARG00000017425	ENSCARG00000017405	ENSCARG00000017385	ENSCARG00000017375	ENSCARG00000017330	ENSCARG00000017307	ENSCARG00000017298	ENSCARG00000017276	ADAM12 (ENSCARG00000015601)	dhx32a (ENSCARG00000015464)	bccip (ENSCARG00000015457)
Cyprininae_a	ANCESTRAL SPECIES	379	ENSGT00940000165641	ENSGT00730000111199	ENSGT01070000253744.b.a.b.a.a	ENSGT00390000017004.a.b.z	ENSGT00940000164397.a	ENSGT00940000157107.a.a.a	ENSGT00390000018119	ENSGT00390000018109	ENSGT00530000063652.b.a	ENSGT00940000155590.i.a	ENSGT00940000154908.b.d	ENSGT01030000234635.a.a.a.b.d	ENSGT00940000171352.f.b	ENSGT00390000009853	ENSGT01050000244965.a.a	ENSGT01030000234578.A.b.a.a.a.b ##22	ENSGT00940000164872.a	ENSGT00950000183002.B.b	ENSGT00940000165336.a.a.a	ENSGT00940000154078.a.a.a	ENSGT00940000167571.a	ENSGT00940000166815.a	ENSGT00950000183122.A.d.b
Common carp reference	MODERN SPECIES	25	ppa1a (ENSCCRG00000036672)	ENSCCRG00000036675	ENSCCRG00000070513	SPOCK2 (ENSCCRG00000074989)	anapc16 (ENSCCRG00000052268)	ddit4 (ENSCCRG00000052269)	dnajb12b (ENSCCRG00000081608)	scd (ENSCCRG00000013039)	ENSCCRG00000060555	ENSCCRG00000063953	ENSCCRG00000011250	ENSCCRG00000011247	ENSCCRG00000045936	ENSCCRG00000027272	ENSCCRG00000074718	ENSCCRG00000011441 ##22	ENSCCRG00000011425	ENSCCRG00000014254	ENSCCRG00000045444	ENSCCRG00000078275	ENSCCRG00000049133	ENSCCRG00000071171	ENSCCRG00000045597	ENSCCRG00000075022	ENSCCRG00000048939	ENSCCRG00000077413	fam53b (ENSCCRG00000067260)	LHPP (ENSCCRG00000053395)	oat (ENSCCRG00000054433)	CPXM2 (ENSCCRG00000031502)	ENSCCRG00000048004
Golden-line barbel	MODERN SPECIES	197	lrrc20 (ENSSGRG00000033866)	NPFFR1 (ENSSGRG00000033865)	ENSSGRG00000033820	SPOCK2 (ENSSGRG00000033811)	anapc16 (ENSSGRG00000033806)	ddit4 (ENSSGRG00000033803)	dnajb12b (ENSSGRG00000033800)	scd (ENSSGRG00000033796)	SEC31B (ENSSGRG00000033710)	ndufb8 (ENSSGRG00000033705)	ENSSGRG00000033704	ENSSGRG00000033703	SYDE1 (ENSSGRG00000033701)	ENSSGRG00000033309	zgc:92749 (ENSSGRG00000033298)	zgc:86738 (ENSSGRG00000033297) ##22	ENSSGRG00000033296	LZTS2 (ENSSGRG00000033293)	ENSSGRG00000033292	ENSSGRG00000033291	FH (ENSSGRG00000033289)
Zebrafish	MODERN SPECIES	898																zgc:86738 (ENSDARG00000102207) ##22
Reedfish	MODERN SPECIES	10	sec24c (ENSECRG00000011103)	SYNPO2L (ENSECRG00000011124)	myoz1b (ENSECRG00000011128)	USP54 (ENSECRG00000011133)	opn4b (ENSECRG00000011140)	LDB3 (ENSECRG00000011153)	bmpr1aa (ENSECRG00000011170)	ENSECRG00000011180	sncgb (ENSECRG00000011192)	glud1a (ENSECRG00000011203)	shld2 (ENSECRG00000011230)	nfkb2 (ENSECRG00000011255)	ENSECRG00000011289	ENSECRG00000011321	elovl6l (ENSECRG00000011346)	zgc:154058 (ENSECRG00000011362) ##22	ENSECRG00000011389	ENSECRG00000011407	unc5b (ENSECRG00000011591)	SLC29A3 (ENSECRG00000012101)	cdh23 (ENSECRG00000012283)	C10orf105 (ENSECRG00000008468)	ENSECRG00000008490	psap (ENSECRG00000008507)	ENSECRG00000008533	micu1 (ENSECRG00000008556)	mcu (ENSECRG00000008582)	OIT3 (ENSECRG00000008601)	pla2g12b (ENSECRG00000008612)	p4ha1b (ENSECRG00000008623)	nudt13 (ENSECRG00000008637)
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a.a ##22
Tetrapoda	ANCESTRAL SPECIES	35	ENSGT00940000155571.A	ENSGT00940000155571.B	ENSGT00950000183027.a.b	ENSGT00950000183054.b	ENSGT00950000182924.A.b.a.a	ENSGT00940000158983	ENSGT00390000007683	ENSGT00940000166242	ENSGT00940000156999	ENSGT00940000156237	ENSGT00940000156481	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908
Amniota	ANCESTRAL SPECIES	98												ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000155571.A	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161188.c.a.a.b	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000156111	ENSGT00940000158282
Aves	ANCESTRAL SPECIES	6	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Pink-footed goose	MODERN SPECIES	75		ENSABRG00000007981	SORBS1 (ENSABRG00000007643)	PDLIM1 (ENSABRG00000007607)	HELLS (ENSABRG00000007595)	ENSABRG00000007520	ENSABRG00000007494	TLL2 (ENSABRG00000002573)	TM9SF3 (ENSABRG00000002115)	PIK3AP1 (ENSABRG00000002087)	NOLC1 (ENSABRG00000002047)	ENSABRG00000002025	ELOVL3 (ENSABRG00000002006)	ENSABRG00000001991	GBF1 (ENSABRG00000001837)	ENSABRG00000001794 ##22	NFKB2 (ENSABRG00000001716)	PSD (ENSABRG00000001650)	FBXL15 (ENSABRG00000001623)	CUEDC2 (ENSABRG00000001577)	PAX2 (ENSABRG00000000430)	HIF1AN (ENSABRG00000000346)	NDUFB8 (ENSABRG00000013141)	SEC31B (ENSABRG00000013130)	WNT8B (ENSABRG00000013116)	SCD (ENSABRG00000013113)	PKD2L1 (ENSABRG00000013097)	ENSABRG00000013092	BLOC1S2 (ENSABRG00000013087)	ENSABRG00000013079	ENSABRG00000013070
Duck	MODERN SPECIES	1091																ENSAPLG00000022856 ##22
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b.e.a	ENSGT00940000155736.D.c.b.f
Japanese quail	MODERN SPECIES	24	EIF3F (ENSCJPG00005016575)	ENSCJPG00005016587	PDLIM1 (ENSCJPG00005017250)	HELLS (ENSCJPG00005017251)	ZP4 (ENSCJPG00005017388)	ENSCJPG00005017389	ENSCJPG00005017392	TLL2 (ENSCJPG00005017433)	TM9SF3 (ENSCJPG00005018311)	PIK3AP1 (ENSCJPG00005018312)	NOLC1 (ENSCJPG00005018313)	ENSCJPG00005018314	ELOVL3 (ENSCJPG00005018315)	ENSCJPG00005018316	GBF1 (ENSCJPG00005018322)	ENSCJPG00005018635 ##22	NFKB2 (ENSCJPG00005018636)	PSD (ENSCJPG00005018780)	FBXL15 (ENSCJPG00005018833)	CUEDC2 (ENSCJPG00005018834)	PAX2 (ENSCJPG00005018835)	HIF1AN (ENSCJPG00005018849)	NDUFB8 (ENSCJPG00005018850)	SEC31B (ENSCJPG00005018851)	WNT8B (ENSCJPG00005018852)	SCD (ENSCJPG00005018853)	PKD2L1 (ENSCJPG00005018854)	ENSCJPG00005018855	BLOC1S2 (ENSCJPG00005018856)	ENSCJPG00005018857	ENSCJPG00005018858
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b.e.a	ENSGT00940000155736.D.c.b.f
Chicken	MODERN SPECIES	35	SORBS1 (ENSGALG00010021617)	ENSGALG00010021711	PDLIM1 (ENSGALG00010021740)	HELLS (ENSGALG00010021750)	ZP4 (ENSGALG00010021757)	ENSGALG00010021763	CYP2C18 (ENSGALG00010023886)	TLL2 (ENSGALG00010021803)	TM9SF3 (ENSGALG00010020228)	PIK3AP1 (ENSGALG00010023847)	NOLC1 (ENSGALG00010020248)	UGT8L (ENSGALG00010020269)	ELOVL3 (ENSGALG00010020275)	ENSGALG00010020809	GBF1 (ENSGALG00010020886)	TMEM150B (ENSGALG00010020979) ##22	NFKB2 (ENSGALG00010021000)	PSD (ENSGALG00010021004)	FBXL15 (ENSGALG00010021014)	CUEDC2 (ENSGALG00010021025)	PAX2 (ENSGALG00010021060)	HIF1AN (ENSGALG00010021071)	NDUFB8 (ENSGALG00010021073)	SEC31B (ENSGALG00010021077)	WNT8B (ENSGALG00010021079)	SCD (ENSGALG00010021083)	PKD2L1 (ENSGALG00010019964)	ABCG2 (ENSGALG00010020622)	BLOC1S2 (ENSGALG00010020632)	CYP2C23a (ENSGALG00010020676)	ALOX5 (ENSGALG00010023818)
Turkey	MODERN SPECIES	28	ENSMGAG00000006662	ENSMGAG00000006693	SORBS1 (ENSMGAG00000006720)	PDLIM1 (ENSMGAG00000006800)	HELLS (ENSMGAG00000006818)	ENSMGAG00000006863	ENSMGAG00000006918	TLL2 (ENSMGAG00000017191)	ENSMGAG00000016449	PIK3AP1 (ENSMGAG00000007240)	NOLC1 (ENSMGAG00000007197)	ENSMGAG00000007177	ELOVL3 (ENSMGAG00000007170)	ENSMGAG00000007168	GBF1 (ENSMGAG00000007097)	ENSMGAG00000007070 ##22	NFKB2 (ENSMGAG00000007029)	PSD (ENSMGAG00000007010)	FBXL15 (ENSMGAG00000007004)	CUEDC2 (ENSMGAG00000006985)	ENSMGAG00000007277	HIF1AN (ENSMGAG00000007294)	NDUFB8 (ENSMGAG00000007315)	SEC31B (ENSMGAG00000007326)	WNT8B (ENSMGAG00000007401)	SCD (ENSMGAG00000007446)	PKD2L1 (ENSMGAG00000007479)	ENSMGAG00000007532	BLOC1S2 (ENSMGAG00000007586)	ENSMGAG00000007601	ENSMGAG00000021042
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Great tit	MODERN SPECIES	26	ANXA7 (ENSPMJG00000015502)	EIF3F (ENSPMJG00000015503)	SORBS1 (ENSPMJG00000015505)	PDLIM1 (ENSPMJG00000015507)	HELLS (ENSPMJG00000015508)	ZP4 (ENSPMJG00000015510)	ENSPMJG00000015511	TLL2 (ENSPMJG00000015512)	TM9SF3 (ENSPMJG00000015513)	PIK3AP1 (ENSPMJG00000015514)	NOLC1 (ENSPMJG00000015515)	ENSPMJG00000015516	ELOVL3 (ENSPMJG00000015517)	ENSPMJG00000015518	GBF1 (ENSPMJG00000015519)	ENSPMJG00000015520 ##22	NFKB2 (ENSPMJG00000015521)	PSD (ENSPMJG00000015522)	FBXL15 (ENSPMJG00000015523)	CUEDC2 (ENSPMJG00000015524)	PAX2 (ENSPMJG00000015525)	HIF1AN (ENSPMJG00000015530)	NDUFB8 (ENSPMJG00000015531)	SEC31B (ENSPMJG00000015532)	WNT8B (ENSPMJG00000016010)	SCD (ENSPMJG00000016011)	PKD2L1 (ENSPMJG00000016012)	ENSPMJG00000016013	BLOC1S2 (ENSPMJG00000016014)	ENSPMJG00000016015	ALOX5 (ENSPMJG00000016016)
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Flycatcher	MODERN SPECIES	25	PPP3CB (ENSFALG00000007095)	ENSFALG00000007098	ENSFALG00000007100	SORBS1 (ENSFALG00000007114)	PDLIM1 (ENSFALG00000007129)	HELLS (ENSFALG00000007136)	TLL2 (ENSFALG00000007191)	ENSFALG00000007169	ENSFALG00000007218	PIK3AP1 (ENSFALG00000007224)	NOLC1 (ENSFALG00000007233)	ENSFALG00000007237	ELOVL3 (ENSFALG00000007242)	PITX3 (ENSFALG00000028716)	GBF1 (ENSFALG00000007250)	ENSFALG00000007258 ##22	NFKB2 (ENSFALG00000007271)	PSD (ENSFALG00000007291)	FBXL15 (ENSFALG00000007300)	CUEDC2 (ENSFALG00000026563)	PAX2 (ENSFALG00000007308)	HIF1AN (ENSFALG00000007314)	NDUFB8 (ENSFALG00000007321)	SEC31B (ENSFALG00000007329)	WNT8B (ENSFALG00000007338)	SCD (ENSFALG00000007354)	PKD2L1 (ENSFALG00000007367)	ENSFALG00000007371	BLOC1S2 (ENSFALG00000007378)	ENSFALG00000028088	ENSFALG00000007387
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Medium ground finch	MODERN SPECIES	3	ANXA7 (ENSGFOG00000009678)	EIF3F (ENSGFOG00000009663)	SORBS1 (ENSGFOG00000009564)	PDLIM1 (ENSGFOG00000009538)	HELLS (ENSGFOG00000009502)	ENSGFOG00000009490	ENSGFOG00000009467	TLL2 (ENSGFOG00000003865)	TM9SF3 (ENSGFOG00000003534)	PIK3AP1 (ENSGFOG00000003354)	NOLC1 (ENSGFOG00000003286)	ENSGFOG00000003271	ELOVL3 (ENSGFOG00000003248)	ENSGFOG00000003227	GBF1 (ENSGFOG00000003121)	ENSGFOG00000003083 ##22	NFKB2 (ENSGFOG00000003039)	PSD (ENSGFOG00000002711)	FBXL15 (ENSGFOG00000002673)	CUEDC2 (ENSGFOG00000002649)	PAX2 (ENSGFOG00000002631)	HIF1AN (ENSGFOG00000002610)	NDUFB8 (ENSGFOG00000002592)	SEC31B (ENSGFOG00000002565)	WNT8B (ENSGFOG00000007041)	SCD (ENSGFOG00000007037)	PKD2L1 (ENSGFOG00000007027)	ENSGFOG00000007010	BLOC1S2 (ENSGFOG00000007004)	ENSGFOG00000005835	ALOX5 (ENSGFOG00000005816)
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Common canary	MODERN SPECIES	7	EIF3F (ENSSCAG00000001070)	SORBS1 (ENSSCAG00000000608)	PDLIM1 (ENSSCAG00000000526)	HELLS (ENSSCAG00000000493)	ENSSCAG00000000477	ENSSCAG00000000466	TLL2 (ENSSCAG00000000304)	TM9SF3 (ENSSCAG00000000215)	PIK3AP1 (ENSSCAG00000000184)	NOLC1 (ENSSCAG00000000165)	ENSSCAG00000000157	ELOVL3 (ENSSCAG00000000142)	ENSSCAG00000000114	ENSSCAG00000000106	GBF1 (ENSSCAG00000017277)	ENSSCAG00000017273 ##22	NFKB2 (ENSSCAG00000017260)	PSD (ENSSCAG00000017246)	FBXL15 (ENSSCAG00000017242)	CUEDC2 (ENSSCAG00000017240)	PAX2 (ENSSCAG00000017234)	HIF1AN (ENSSCAG00000017223)	NDUFB8 (ENSSCAG00000017220)	SEC31B (ENSSCAG00000017212)	WNT8B (ENSSCAG00000017202)	SCD (ENSSCAG00000017200)	PKD2L1 (ENSSCAG00000017196)	ENSSCAG00000017193	BLOC1S2 (ENSSCAG00000017190)	ENSSCAG00000017185	ALOX5 (ENSSCAG00000017176)
Zebra finch	MODERN SPECIES	28	PPP3CB (ENSTGUG00000007056)	ANXA7 (ENSTGUG00000007092)	EIF3F (ENSTGUG00000007105)	SORBS1 (ENSTGUG00000007122)	PDLIM1 (ENSTGUG00000007148)	HELLS (ENSTGUG00000007157)	ZP4 (ENSTGUG00000007190)	ENSTGUG00000007197	TLL2 (ENSTGUG00000007264)	TM9SF3 (ENSTGUG00000007294)	PIK3AP1 (ENSTGUG00000007322)	ENSTGUG00000007368	ENSTGUG00000007384	ENSTGUG00000007407	GBF1 (ENSTGUG00000007414)	ENSTGUG00000027921 ##22	NFKB2 (ENSTGUG00000007491)	PSD (ENSTGUG00000007566)	FBXL15 (ENSTGUG00000007604)	CUEDC2 (ENSTGUG00000007606)	PAX2 (ENSTGUG00000007620)	HIF1AN (ENSTGUG00000007639)	NDUFB8 (ENSTGUG00000007648)	SEC31B (ENSTGUG00000007660)	WNT8B (ENSTGUG00000007673)	SCD (ENSTGUG00000007683)	PKD2L1 (ENSTGUG00000007707)	ENSTGUG00000007742	BLOC1S2 (ENSTGUG00000027541)	ENSTGUG00000007772	ALOX5 (ENSTGUG00000007818)
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00940000161324	ENSGT00940000155736.D.c.a	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000155736.D.c.b	ENSGT00940000156111
Kakapo	MODERN SPECIES	22	ANXA7 (ENSSHBG00005013442)	EIF3F (ENSSHBG00005013468)	SORBS1 (ENSSHBG00005013689)	PDLIM1 (ENSSHBG00005014193)	HELLS (ENSSHBG00005014207)	ENSSHBG00005014225	ENSSHBG00005014242	ENSSHBG00005000220	TLL2 (ENSSHBG00005000253)	TM9SF3 (ENSSHBG00005000264)	PIK3AP1 (ENSSHBG00005001952)	NOLC1 (ENSSHBG00005002008)	ENSSHBG00005002040	ENSSHBG00005002060	GBF1 (ENSSHBG00005002095)	ENSSHBG00005002193 ##22	NFKB2 (ENSSHBG00005002209)	PSD (ENSSHBG00005002237)	FBXL15 (ENSSHBG00005002271)	CUEDC2 (ENSSHBG00005002280)	PAX2 (ENSSHBG00005002312)	HIF1AN (ENSSHBG00005002356)	NDUFB8 (ENSSHBG00005002384)	SEC31B (ENSSHBG00005002421)	WNT8B (ENSSHBG00005002490)	SCD (ENSSHBG00005002508)	PKD2L1 (ENSSHBG00005002526)	ENSSHBG00005002554	BLOC1S2 (ENSSHBG00005002580)	ENSSHBG00005002591	ENSSHBG00005002614
Golden eagle	MODERN SPECIES	2	ANXA7 (ENSACCG00020010999)	EIF3F (ENSACCG00020010984)	SORBS1 (ENSACCG00020010886)	PDLIM1 (ENSACCG00020010803)	HELLS (ENSACCG00020010774)	ZP4 (ENSACCG00020010751)	ENSACCG00020010731	TLL2 (ENSACCG00020010674)	TM9SF3 (ENSACCG00020010626)	PIK3AP1 (ENSACCG00020010598)	NOLC1 (ENSACCG00020010582)	ENSACCG00020010563	ELOVL3 (ENSACCG00020010550)	ENSACCG00020010529	GBF1 (ENSACCG00020010470)	ENSACCG00020010421 ##22	NFKB2 (ENSACCG00020010399)	PSD (ENSACCG00020010299)	FBXL15 (ENSACCG00020010200)	CUEDC2 (ENSACCG00020010188)	PAX2 (ENSACCG00020010111)	HIF1AN (ENSACCG00020009984)	NDUFB8 (ENSACCG00020009970)	SEC31B (ENSACCG00020009939)	WNT8B (ENSACCG00020009911)	SCD (ENSACCG00020009904)	PKD2L1 (ENSACCG00020009891)	ENSACCG00020009871	BLOC1S2 (ENSACCG00020009859)	ENSACCG00020009846	ALOX5 (ENSACCG00020009826)
Australian saltwater crocodile	MODERN SPECIES	68	PPP3CB (ENSCPRG00005003196)	ANXA7 (ENSCPRG00005003185)	EIF3F (ENSCPRG00005003182)	SORBS1 (ENSCPRG00005002790)	PDLIM1 (ENSCPRG00005002748)	HELLS (ENSCPRG00005002734)	ENSCPRG00005002715	TLL2 (ENSCPRG00005002074)	TM9SF3 (ENSCPRG00005001917)	PIK3AP1 (ENSCPRG00005001906)	ENSCPRG00005001898	NOLC1 (ENSCPRG00005001895)	ENSCPRG00005001891	ENSCPRG00005001882	GBF1 (ENSCPRG00005001363)	ENSCPRG00005001280 ##22	NFKB2 (ENSCPRG00005000880)	PSD (ENSCPRG00005000805)	FBXL15 (ENSCPRG00005000799)	CUEDC2 (ENSCPRG00005000790)	PAX2 (ENSCPRG00005000769)	HIF1AN (ENSCPRG00005000754)	NDUFB8 (ENSCPRG00005000747)	SEC31B (ENSCPRG00005000707)	WNT8B (ENSCPRG00005000688)	SCD (ENSCPRG00005000657)	PKD2L1 (ENSCPRG00005000640)	ENSCPRG00005000613	BLOC1S2 (ENSCPRG00005000593)	ALOX5 (ENSCPRG00005000577)	MARCHF8 (ENSCPRG00005000557)
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000169035.a	ENSGT00940000154371.b	ENSGT00940000153997.b.b	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00940000158282	ENSGT00940000155736.D.c.b.a.a	ENSGT00940000156111	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000156481	ENSGT00940000156237
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00390000018316.b.b	ENSGT00940000169035.a	ENSGT00940000154371.b	ENSGT00940000153997.b.b	ENSGT00940000153997.b.a.a	ENSGT00940000155716	ENSGT00940000158282.g	ENSGT00940000156111	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628.db	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908.v	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000161188.c.a.a.a.a	ENSGT00940000154908.u
Testudinidae	ANCESTRAL SPECIES	5						ENSGT00940000155736.D.c.b.b.a	ENSGT00940000156111	ENSGT00950000185185.b	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628.db	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908.v	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000161188.c.a.a.a.a	ENSGT00940000154908.u
Abingdon island giant tortoise	MODERN SPECIES	606	ENSCABG00000005923	ENSCABG00000005926	ENSCABG00000005939	ENSCABG00000006398	ALOX5 (ENSCABG00000006589)	ENSCABG00000006591	TLL2 (ENSCABG00000006593)	TM9SF3 (ENSCABG00000006604)	PIK3AP1 (ENSCABG00000006608)	NOLC1 (ENSCABG00000006610)	ENSCABG00000006611	ELOVL3 (ENSCABG00000006613)	ENSCABG00000006614	ENSCABG00000006615	ENSCABG00000006616	ENSCABG00000006619 ##22	NFKB2 (ENSCABG00000006627)	PSD (ENSCABG00000006663)	FBXL15 (ENSCABG00000006666)	CUEDC2 (ENSCABG00000006669)	PAX2 (ENSCABG00000006674)	HIF1AN (ENSCABG00000006752)	ENSCABG00000006753	SEC31B (ENSCABG00000006755)	WNT8B (ENSCABG00000006757)	ENSCABG00000006758	PKD2L1 (ENSCABG00000006768)	ENSCABG00000006780	BLOC1S2 (ENSCABG00000006784)	ENSCABG00000006785	ENSCABG00000006787
Goode s thornscrub tortoise	MODERN SPECIES	21	ENSGEVG00005011901	ENSGEVG00005012124	ENSGEVG00005012167	ENSGEVG00005012251	ENSGEVG00005012492	ALOX5 (ENSGEVG00005012524)	ENSGEVG00005012559	TLL2 (ENSGEVG00005012596)	TM9SF3 (ENSGEVG00005012746)	PIK3AP1 (ENSGEVG00005012783)	NOLC1 (ENSGEVG00005012883)	ENSGEVG00005012983	ELOVL3 (ENSGEVG00005013044)	ENSGEVG00005013059	GBF1 (ENSGEVG00005013116)	ENSGEVG00005013484 ##22	NFKB2 (ENSGEVG00005013585)	ENSGEVG00005013632	ENSGEVG00005013712	FBXL15 (ENSGEVG00005005349)	CUEDC2 (ENSGEVG00005005376)	PAX2 (ENSGEVG00005005417)	HIF1AN (ENSGEVG00005005529)	NDUFB8 (ENSGEVG00005005571)	SEC31B (ENSGEVG00005005667)	WNT8B (ENSGEVG00005005755)	SCD (ENSGEVG00005005815)	PKD2L1 (ENSGEVG00005005917)	ENSGEVG00005005976	BLOC1S2 (ENSGEVG00005006053)	ENSGEVG00005006155
Emydidae	ANCESTRAL SPECIES	9								ENSGT00940000156111	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628.db	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908.v	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00940000161188.c.a.a.a.b.b	ENSGT00940000161188.c.a.a.a.b.a
Three-toed box turtle	MODERN SPECIES	144						ALOX5 (ENSTMTG00000003387)	ENSTMTG00000003361	TLL2 (ENSTMTG00000003323)	TM9SF3 (ENSTMTG00000003282)	PIK3AP1 (ENSTMTG00000003263)	NOLC1 (ENSTMTG00000003245)	ENSTMTG00000022104	ELOVL3 (ENSTMTG00000022093)	ENSTMTG00000022086	GBF1 (ENSTMTG00000021874)	ENSTMTG00000021811 ##22	NFKB2 (ENSTMTG00000021795)	PSD (ENSTMTG00000021770)	FBXL15 (ENSTMTG00000021758)	CUEDC2 (ENSTMTG00000021753)	PAX2 (ENSTMTG00000021723)	HIF1AN (ENSTMTG00000021693)	SEC31B (ENSTMTG00000021671)	WNT8B (ENSTMTG00000021666)	ENSTMTG00000021653	PKD2L1 (ENSTMTG00000021640)	ENSTMTG00000021631	BLOC1S2 (ENSTMTG00000021625)	ENSTMTG00000021615	ENSTMTG00000021611	CAMK2G (ENSTMTG00000021593)
painted turtle	MODERN SPECIES	765											ENSCPBG00000020399	ENSCPBG00000020402	ELOVL3 (ENSCPBG00000020404)	ENSCPBG00000020406	GBF1 (ENSCPBG00000020416)	ENSCPBG00000020431 ##22	NFKB2 (ENSCPBG00000020445)	PSD (ENSCPBG00000020451)	FBXL15 (ENSCPBG00000020452)	CUEDC2 (ENSCPBG00000020455)	PAX2 (ENSCPBG00000020459)	HIF1AN (ENSCPBG00000020549)	NDUFB8 (ENSCPBG00000020556)	SEC31B (ENSCPBG00000020557)	WNT8B (ENSCPBG00000020569)	ENSCPBG00000020571	PKD2L1 (ENSCPBG00000020573)	ENSCPBG00000020580	BLOC1S2 (ENSCPBG00000020592)	ENSCPBG00000020595	ENSCPBG00000020599
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00950000183027.a.b	ENSGT00940000155571.B	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889
Episquamata	ANCESTRAL SPECIES	2	ENSGT00390000007683	ENSGT00940000158983	ENSGT00950000182924.A.b.a.a	ENSGT00950000183054.b	ENSGT00950000183027.a.b	ENSGT00940000155571.B	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT00940000156545	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00860000134673	ENSGT00740000115593	ENSGT00940000155525
Laterata	ANCESTRAL SPECIES		ENSGT00940000156999	ENSGT00940000166242.a	ENSGT00390000007683	ENSGT00940000158983	ENSGT00950000182924.A.b.a.a	ENSGT00950000183054.b	ENSGT00950000183027.a.b	ENSGT00940000155571.B	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00940000162658.a.a	ENSGT00390000005889	ENSGT00860000134673	ENSGT00740000115593	ENSGT00940000155525
Argentine black and white tegu	MODERN SPECIES	47	ENSSMRG00000001835	SYNPO2L (ENSSMRG00000001823)	MYOZ1 (ENSSMRG00000001819)	USP54 (ENSSMRG00000001798)	PPP3CB (ENSSMRG00000001783)	ANXA7 (ENSSMRG00000001772)	ENSSMRG00000001762	EIF3F (ENSSMRG00000001726)	TM9SF3 (ENSSMRG00000001719)	PIK3AP1 (ENSSMRG00000001707)	ENSSMRG00000001704	NOLC1 (ENSSMRG00000001698)	ENSSMRG00000001693	ENSSMRG00000001680	GBF1 (ENSSMRG00000001625)	ENSSMRG00000001614 ##22	NFKB2 (ENSSMRG00000001584)	PSD (ENSSMRG00000001565)	FBXL15 (ENSSMRG00000001549)	CUEDC2 (ENSSMRG00000001529)	ENSSMRG00000001523	PAX2 (ENSSMRG00000001468)	ENSSMRG00000001412	HIF1AN (ENSSMRG00000001376)	NDUFB8 (ENSSMRG00000001375)	WNT8B (ENSSMRG00000001374)	SCD (ENSSMRG00000001367)	PKD2L1 (ENSSMRG00000000957)	ENSSMRG00000000918	BLOC1S2 (ENSSMRG00000000891)	HELLS (ENSSMRG00000000835)
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000001845	ENSPMRG00000001838	ENSPMRG00000001829	SYNPO2L (ENSPMRG00000001820)	MYOZ1 (ENSPMRG00000001808)	PPP3CB (ENSPMRG00000001624)	ANXA7 (ENSPMRG00000001604)	ENSPMRG00000001597	EIF3F (ENSPMRG00000001588)	TM9SF3 (ENSPMRG00000001569)	PIK3AP1 (ENSPMRG00000001430)	NOLC1 (ENSPMRG00000001367)	ENSPMRG00000001344	ENSPMRG00000001334	GBF1 (ENSPMRG00000001277)	ENSPMRG00000001238 ##22	NFKB2 (ENSPMRG00000000687)	PSD (ENSPMRG00000000496)	ENSPMRG00000000472	FBXL15 (ENSPMRG00000000450)	CUEDC2 (ENSPMRG00000000422)	PAX2 (ENSPMRG00000000343)	HIF1AN (ENSPMRG00000000282)	ENSPMRG00000000259	NDUFB8 (ENSPMRG00000000239)	WNT8B (ENSPMRG00000000205)	SCD (ENSPMRG00000004749)	PKD2L1 (ENSPMRG00000004742)	ENSPMRG00000004737	BLOC1S2 (ENSPMRG00000004731)	ENSPMRG00000004725
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000166242.b	ENSGT00390000007683	ENSGT00940000158983	ENSGT00950000182924.A.b.a.a	ENSGT00950000183054.b	ENSGT00950000183027.a.b	ENSGT00940000155571.B	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00950000183073.a.a.a	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00730000111092	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000157274	ENSGT00390000005889	ENSGT00860000134673	ENSGT00740000115593	ENSGT00940000155525	ENSGT00940000158658	ENSGT00390000015682
Lizard	MODERN SPECIES	810	CHCHD1 (ENSACAG00000036619)	FUT11 (ENSACAG00000009701)	ENSACAG00000009727	SYNPO2L (ENSACAG00000009895)	MYOZ1 (ENSACAG00000009922)	USP54 (ENSACAG00000009939)	ENSACAG00000043417	PPP3CB (ENSACAG00000010008)	ENSACAG00000010149	ENSACAG00000010260	ENSACAG00000014777	ENSACAG00000014577	NOLC1 (ENSACAG00000014545)	ENSACAG00000014532	GBF1 (ENSACAG00000014475)	ENSACAG00000038789 ##22	NFKB2 (ENSACAG00000014215)	PSD (ENSACAG00000014133)	FBXL15 (ENSACAG00000014128)	ENSACAG00000014063
tuatara	MODERN SPECIES	579														ELOVL3 (ENSSPUG00000014743)	GBF1 (ENSSPUG00000014652)	ENSSPUG00000014630 ##22	NFKB2 (ENSSPUG00000014608)	PSD (ENSSPUG00000014570)	FBXL15 (ENSSPUG00000014556)	CUEDC2 (ENSSPUG00000014547)	PAX2 (ENSSPUG00000014528)	NFASC (ENSSPUG00000014492)	CNTN2 (ENSSPUG00000014464)	RBBP5 (ENSSPUG00000014435)	DSTYK (ENSSPUG00000014411)	TMCC2 (ENSSPUG00000014399)	NUAK2 (ENSSPUG00000014390)	KLHDC8A (ENSSPUG00000014381)	CDK18 (ENSSPUG00000014358)	MFSD4A (ENSSPUG00000014293)	ENSSPUG00000014278
Anura	ANCESTRAL SPECIES	72		ENSGT00940000155571.B	ENSGT00950000183027.a.b	ENSGT00950000183054.b	ENSGT00950000182924.A.b.a.a	ENSGT00940000158983	ENSGT00390000007683	ENSGT00940000166242	ENSGT00940000156999	ENSGT00940000156237	ENSGT00940000156481	ENSGT00730000111092	ENSGT01050000244965.a	ENSGT00940000154518.b	ENSGT00940000156925	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT00940000160968	ENSGT00940000155061.a.b	ENSGT00940000160250	ENSGT00390000014513	ENSGT00940000157412.b	ENSGT00940000157409	ENSGT00390000000628	ENSGT00390000003175.a.a	ENSGT00940000160584	ENSGT00940000154908	ENSGT00940000158426	ENSGT00390000005448	ENSGT00940000160223	ENSGT00940000155342	ENSGT00730000111199
Leishan spiny toad	MODERN SPECIES	9	MYOZ1 (ENSLLEG00000027753)	SYNPO2L (ENSLLEG00000027790)	ENSLLEG00000027823	FUT11 (ENSLLEG00000028032)	CHCHD1 (ENSLLEG00000028061)	ENSLLEG00000028084	ZSWIM8 (ENSLLEG00000028183)	NDST2 (ENSLLEG00000028708)	ENSLLEG00000028783	ENSLLEG00000028798	CAMK2G (ENSLLEG00000028889)	NOLC1 (ENSLLEG00000029552)	ELOVL3 (ENSLLEG00000029611)	ENSLLEG00000029622	GBF1 (ENSLLEG00000029742)	ENSLLEG00000030212 ##22	NFKB2 (ENSLLEG00000030239)	PSD (ENSLLEG00000030316)	FBXL15 (ENSLLEG00000015065)	CUEDC2 (ENSLLEG00000015294)	PAX2 (ENSLLEG00000015451)	ENSLLEG00000016354	HIF1AN (ENSLLEG00000016381)	NDUFB8 (ENSLLEG00000016541)	SEC31B (ENSLLEG00000016616)	WNT8B (ENSLLEG00000017149)	ENSLLEG00000017774	SCD (ENSLLEG00000017815)	ADAMTS14 (ENSLLEG00000017916)	PALD1 (ENSLLEG00000018140)	ENSLLEG00000019511
Frog	MODERN SPECIES	7	neurog3 (ENSXETG00000026423)	ENSXETG00000048023	camk2g (ENSXETG00000006455)	ndst2 (ENSXETG00000009997)	zswim8 (ENSXETG00000010000)	chchd1 (ENSXETG00000010005)	usp54 (ENSXETG00000010009)	sec24c (ENSXETG00000010012)	synpo2l (ENSXETG00000038708)	myoz1 (ENSXETG00000010013)	ENSXETG00000047548	nolc1 (ENSXETG00000010014)	elovl3 (ENSXETG00000046037)	gbf1 (ENSXETG00000010019)	pitx3 (ENSXETG00000036002)	bc014685 (ENSXETG00000035095) ##22	vav2 (ENSXETG00000000013)	ENSXETG00000044504	ENSXETG00000043799	ENSXETG00000043822	ENSXETG00000045341	PSD (ENSXETG00000038670)	fbxl15 (ENSXETG00000014210)	cuedc2 (ENSXETG00000014207)	pax2 (ENSXETG00000014206)	ENSXETG00000039000	hif1an (ENSXETG00000014204)	sec31b (ENSXETG00000014203)	wnt8b (ENSXETG00000023760)	scd (ENSXETG00000023757)	adamts14 (ENSXETG00000023752)
Elephant shark	MODERN SPECIES	1488	zfand4 (ENSCMIG00000009823)	marchf8 (ENSCMIG00000009826)	ENSCMIG00000009829	ENSCMIG00000009839	ghitm (ENSCMIG00000009858)	chst3a (ENSCMIG00000009861)	ENSCMIG00000009866	cuedc2 (ENSCMIG00000009870)	fbxl15 (ENSCMIG00000009873)	ENSCMIG00000009878	hif1an (ENSCMIG00000009892)	ndufb8 (ENSCMIG00000009905)	SEC31B (ENSCMIG00000009933)	wnt8b (ENSCMIG00000009971)	scd (ENSCMIG00000009975)	ENSCMIG00000009979 ##22	ENSCMIG00000009980 ##22	ENSCMIG00000009982	ENSCMIG00000009985	pald1b (ENSCMIG00000009988)
Gnathostomata	ANCESTRAL SPECIES	630																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT01090000262771	ENSGT00940000160325.b	ENSGT00390000014909
Euteleostomi	ANCESTRAL SPECIES	675																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909
Sarcopterygii	ANCESTRAL SPECIES	210																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162006	ENSGT00940000155715	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000161102
Tetrapoda	ANCESTRAL SPECIES	61	ENSGT00950000182926.b.c	ENSGT00940000166166	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631	ENSGT00530000063691.a	ENSGT00950000182943	ENSGT00940000155061.b	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000161102
Amniota	ANCESTRAL SPECIES	57					ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631	ENSGT00530000063691.a	ENSGT00950000182943.kb.a	ENSGT00950000182943.kb.b.a.b.b	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Mammalia	ANCESTRAL SPECIES	67	ENSGT00940000154390.A.j	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631	ENSGT00530000063691.a	ENSGT00950000182943.jb	ENSGT00950000182943.kb.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00950000182943.kb.b.a.b.b.b	ENSGT00950000182943.kb.b.a.b.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007
Theria	ANCESTRAL SPECIES	13	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Atlantogenata	ANCESTRAL SPECIES	98	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Xenarthra	ANCESTRAL SPECIES	240													ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
Armadillo	MODERN SPECIES	344												ATOH8 (ENSDNOG00000047321)	ENSDNOG00000024234	SFTPB (ENSDNOG00000043019)	USP39 (ENSDNOG00000034517)	TMEM150A (ENSDNOG00000033208) ##22	RNF181 (ENSDNOG00000011353)	VAMP5 (ENSDNOG00000039900)	VAMP8 (ENSDNOG00000044201)	GGCX (ENSDNOG00000008326)	MAT2A (ENSDNOG00000033164)	CAPG (ENSDNOG00000019583)	ELMOD3 (ENSDNOG00000006657)	RETSAT (ENSDNOG00000035880)	ENSDNOG00000046253	ENSDNOG00000035009
Afrotheria	ANCESTRAL SPECIES	119	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Tenrec	MODERN SPECIES	6205																TMEM150A (ENSETEG00000011968) ##22	RNF181 (ENSETEG00000011965)
Afrotheria_a	ANCESTRAL SPECIES	121	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Elephant	MODERN SPECIES	589	RMND5A (ENSLAFG00000015890)	RNF103 (ENSLAFG00000009755)	CHMP3 (ENSLAFG00000026617)	ENSLAFG00000009979	ENSLAFG00000026894	REEP1 (ENSLAFG00000001321)	MRPL35 (ENSLAFG00000001319)	IMMT (ENSLAFG00000001316)	PTCD3 (ENSLAFG00000014956)	POLR1A (ENSLAFG00000014948)	ST3GAL5 (ENSLAFG00000003639)	ATOH8 (ENSLAFG00000027790)	SFTPB (ENSLAFG00000015010)	USP39 (ENSLAFG00000011741)	C2orf68 (ENSLAFG00000023236)	TMEM150A (ENSLAFG00000018054) ##22	RNF181 (ENSLAFG00000021776)	VAMP5 (ENSLAFG00000021786)	VAMP8 (ENSLAFG00000001520)	GGCX (ENSLAFG00000018045)	MAT2A (ENSLAFG00000018042)	ENSLAFG00000021536	CAPG (ENSLAFG00000016295)	ELMOD3 (ENSLAFG00000016291)	RETSAT (ENSLAFG00000016282)	ENSLAFG00000005443	TCF7L1 (ENSLAFG00000016275)	KCMF1 (ENSLAFG00000018643)	TMSB10 (ENSLAFG00000021694)	DNAH6 (ENSLAFG00000009483)	SUCLG1 (ENSLAFG00000014517)
Boreoeutheria	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Laurasiatheria	ANCESTRAL SPECIES	13	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Eulipotyphla	ANCESTRAL SPECIES	2010																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552
Hedgehog	MODERN SPECIES	6391																TMEM150A (ENSEEUG00000001970) ##22	RNF181 (ENSEEUG00000001964)
Common shrew	MODERN SPECIES	4967																TMEM150A (ENSSARG00000009431) ##22	ENSSARG00000009425
Laurasiatheria_a	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Artiodactyla	ANCESTRAL SPECIES	16	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Suina	ANCESTRAL SPECIES	13	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Pig	MODERN SPECIES	11	RNF103 (ENSSSCG00000008218)	CHMP3 (ENSSSCG00000008222)	KDM3A (ENSSSCG00000008221)	REEP1 (ENSSSCG00000023710)	MRPL35 (ENSSSCG00000021746)	IMMT (ENSSSCG00000024564)	PTCD3 (ENSSSCG00000008225)	POLR1A (ENSSSCG00000008226)	ENSSSCG00000058352	ST3GAL5 (ENSSSCG00000008227)	ATOH8 (ENSSSCG00000008230)	GNLY (ENSSSCG00000008228)	SFTPB (ENSSSCG00000008229)	USP39 (ENSSSCG00000030435)	C2orf68 (ENSSSCG00000028287)	TMEM150A (ENSSSCG00000008233) ##22	RNF181 (ENSSSCG00000008232)	VAMP5 (ENSSSCG00000033135)	VAMP8 (ENSSSCG00000062938)	GGCX (ENSSSCG00000027381)	MAT2A (ENSSSCG00000022300)	ENSSSCG00000008240	CAPG (ENSSSCG00000008239)	ELMOD3 (ENSSSCG00000008238)	RETSAT (ENSSSCG00000008237)	ENSSSCG00000050627	ENSSSCG00000008241	ENSSSCG00000051279	KCMF1 (ENSSSCG00000008242)	TMSB10 (ENSSSCG00000008245)	DNAH6 (ENSSSCG00000045529)
Chacoan peccary	MODERN SPECIES	778	RNF103 (ENSCWAG00000005728)	ENSCWAG00000005711	CHMP3 (ENSCWAG00000005667)	KDM3A (ENSCWAG00000005579)	REEP1 (ENSCWAG00000005308)	MRPL35 (ENSCWAG00000005221)	IMMT (ENSCWAG00000005105)	PTCD3 (ENSCWAG00000005070)	POLR1A (ENSCWAG00000005022)	ST3GAL5 (ENSCWAG00000004882)	ATOH8 (ENSCWAG00000004847)	ENSCWAG00000004815	SFTPB (ENSCWAG00000004607)	USP39 (ENSCWAG00000004340)	C2orf68 (ENSCWAG00000004281)	TMEM150A (ENSCWAG00000004246) ##22	RNF181 (ENSCWAG00000004223)	VAMP5 (ENSCWAG00000004199)	VAMP8 (ENSCWAG00000004178)	GGCX (ENSCWAG00000004008)	MAT2A (ENSCWAG00000003951)	ENSCWAG00000003929	CAPG (ENSCWAG00000003883)	ELMOD3 (ENSCWAG00000003833)	RETSAT (ENSCWAG00000003794)	ENSCWAG00000003769	TCF7L1 (ENSCWAG00000003731)	KCMF1 (ENSCWAG00000003682)	TMSB10 (ENSCWAG00000020204)	DNAH6 (ENSCWAG00000020066)	SUCLG1 (ENSCWAG00000020040)
Artiodactyla_a	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Camelidae	ANCESTRAL SPECIES	89	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000165681	ENSGT00940000154761	ENSGT00940000156351
Arabian camel	MODERN SPECIES	20	RMND5A (ENSCDRG00005013820)	RNF103 (ENSCDRG00005013889)	CHMP3 (ENSCDRG00005013938)	KDM3A (ENSCDRG00005013998)	REEP1 (ENSCDRG00005014142)	MRPL35 (ENSCDRG00005014433)	IMMT (ENSCDRG00005014543)	PTCD3 (ENSCDRG00005015005)	POLR1A (ENSCDRG00005015250)	ST3GAL5 (ENSCDRG00005015428)	ATOH8 (ENSCDRG00005015499)	ENSCDRG00005015532	SFTPB (ENSCDRG00005015553)	USP39 (ENSCDRG00005015614)	C2orf68 (ENSCDRG00005015950)	TMEM150A (ENSCDRG00005016019) ##22	RNF181 (ENSCDRG00005016091)	VAMP5 (ENSCDRG00005016173)	VAMP8 (ENSCDRG00005016194)	GGCX (ENSCDRG00005016233)	MAT2A (ENSCDRG00005016380)	SH2D6 (ENSCDRG00005016477)	CAPG (ENSCDRG00005016605)	ELMOD3 (ENSCDRG00005016681)	RETSAT (ENSCDRG00005016753)	ENSCDRG00005016793	TCF7L1 (ENSCDRG00005016823)	KCMF1 (ENSCDRG00005016907)	ENSCDRG00005016982	DNAH6 (ENSCDRG00005017032)	SUCLG1 (ENSCDRG00005017092)
Artiodactyla_b	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Cetacea	ANCESTRAL SPECIES	16	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Blue whale	MODERN SPECIES	4	ENSBMSG00010016372	KDM3A (ENSBMSG00010016412)	REEP1 (ENSBMSG00010016470)	MRPL35 (ENSBMSG00010016621)	IMMT (ENSBMSG00010016688)	PTCD3 (ENSBMSG00010016832)	POLR1A (ENSBMSG00010016886)	ENSBMSG00010016939	ENSBMSG00010016964	ST3GAL5 (ENSBMSG00010016994)	ATOH8 (ENSBMSG00010017024)	ENSBMSG00010017048	ENSBMSG00010017087	USP39 (ENSBMSG00010017135)	C2orf68 (ENSBMSG00010017326)	TMEM150A (ENSBMSG00010017376) ##22	RNF181 (ENSBMSG00010017562)	VAMP5 (ENSBMSG00010017623)	VAMP8 (ENSBMSG00010017652)	GGCX (ENSBMSG00010017708)	MAT2A (ENSBMSG00010017771)	SH2D6 (ENSBMSG00010017841)	CAPG (ENSBMSG00010017946)	ELMOD3 (ENSBMSG00010017999)	RETSAT (ENSBMSG00010018024)	TCF7L1 (ENSBMSG00010018055)	KCMF1 (ENSBMSG00010018181)	TMSB10 (ENSBMSG00010018283)	TRABD2A (ENSBMSG00010018310)	ENSBMSG00010018427	DNAH6 (ENSBMSG00010018565)
Odontoceti	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00390000018741.l	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Sperm whale	MODERN SPECIES	531																CUNH2orf68 (ENSPCTG00005021019) ##22	RNF181 (ENSPCTG00005021092)	VAMP5 (ENSPCTG00005021120)	VAMP8 (ENSPCTG00005021132)
Odontoceti_a	ANCESTRAL SPECIES	12	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00390000018741.l	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Dolphin	MODERN SPECIES	1097													SFTPB (ENSTTRG00000008974)	USP39 (ENSTTRG00000008973)	C2orf68 (ENSTTRG00000008972)	TMEM150A (ENSTTRG00000008971) ##22	RNF181 (ENSTTRG00000008970)	VAMP5 (ENSTTRG00000008969)	VAMP8 (ENSTTRG00000008968)	GGCX (ENSTTRG00000008967)	MAT2A (ENSTTRG00000008966)	ENSTTRG00000008965	CAPG (ENSTTRG00000008964)	ENSTTRG00000008963	RETSAT (ENSTTRG00000008962)	TCF7L1 (ENSTTRG00000008959)
Odontoceti_b	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00390000018741.l	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000165681.d	ENSGT00940000162805
Vaquita	MODERN SPECIES	4	RMND5A (ENSPSNG00000010178)	RNF103 (ENSPSNG00000010129)	ENSPSNG00000010107	CHMP3 (ENSPSNG00000009996)	KDM3A (ENSPSNG00000009886)	REEP1 (ENSPSNG00000009725)	MRPL35 (ENSPSNG00000009621)	IMMT (ENSPSNG00000009473)	PTCD3 (ENSPSNG00000009324)	ENSPSNG00000009166	ST3GAL5 (ENSPSNG00000009048)	ATOH8 (ENSPSNG00000009001)	SFTPB (ENSPSNG00000008818)	USP39 (ENSPSNG00000008572)	C2orf68 (ENSPSNG00000008473)	TMEM150A (ENSPSNG00000008402) ##22	ENSPSNG00000008334	GGCX (ENSPSNG00000008137)	MAT2A (ENSPSNG00000008074)	SH2D6 (ENSPSNG00000007965)	CAPG (ENSPSNG00000007897)	ELMOD3 (ENSPSNG00000007846)	RETSAT (ENSPSNG00000007803)	ENSPSNG00000007780	TCF7L1 (ENSPSNG00000007696)	KCMF1 (ENSPSNG00000007665)	TMSB10 (ENSPSNG00000007636)	ENSPSNG00000007617	TRABD2A (ENSPSNG00000007576)	DNAH6 (ENSPSNG00000007496)	SUCLG1 (ENSPSNG00000007400)
Monodontidae	ANCESTRAL SPECIES	13	ENSGT00390000006413	ENSGT00390000018741.l	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000165659.a	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000165681.d	ENSGT00940000154761
Beluga whale	MODERN SPECIES	61	RNF103 (ENSDLEG00000016817)	ENSDLEG00000016808	CHMP3 (ENSDLEG00000016796)	KDM3A (ENSDLEG00000016750)	REEP1 (ENSDLEG00000016669)	MRPL35 (ENSDLEG00000016654)	IMMT (ENSDLEG00000016629)	PTCD3 (ENSDLEG00000016579)	POLR1A (ENSDLEG00000016519)	ENSDLEG00000016502	ST3GAL5 (ENSDLEG00000016463)	ATOH8 (ENSDLEG00000016446)	ENSDLEG00000016291	USP39 (ENSDLEG00000016236)	CUNH2orf68 (ENSDLEG00000016225)	TMEM150A (ENSDLEG00000016207) ##22	RNF181 (ENSDLEG00000016163)	VAMP5 (ENSDLEG00000016153)	VAMP8 (ENSDLEG00000016147)	GGCX (ENSDLEG00000016129)	MAT2A (ENSDLEG00000016119)	ENSDLEG00000016109	CAPG (ENSDLEG00000016089)	ELMOD3 (ENSDLEG00000016055)	RETSAT (ENSDLEG00000016040)	ENSDLEG00000016031	TCF7L1 (ENSDLEG00000016012)	KCMF1 (ENSDLEG00000015950)	ENSDLEG00000015940	DNAH6 (ENSDLEG00000015865)	SUCLG1 (ENSDLEG00000015835)
Narwhal	MODERN SPECIES	305	RNF103 (ENSMMNG00015005296)	CHMP3 (ENSMMNG00015005319)	ENSMMNG00015005329	KDM3A (ENSMMNG00015005358)	REEP1 (ENSMMNG00015005391)	MRPL35 (ENSMMNG00015005420)	IMMT (ENSMMNG00015005456)	PTCD3 (ENSMMNG00015005490)	POLR1A (ENSMMNG00015005538)	ENSMMNG00015005573	ST3GAL5 (ENSMMNG00015005607)	ATOH8 (ENSMMNG00015005651)	SFTPB (ENSMMNG00015005711)	USP39 (ENSMMNG00015005861)	C2orf68 (ENSMMNG00015005970)	TMEM150A (ENSMMNG00015005993) ##22	RNF181 (ENSMMNG00015006028)	VAMP5 (ENSMMNG00015006056)	VAMP8 (ENSMMNG00015006072)	GGCX (ENSMMNG00015006106)	MAT2A (ENSMMNG00015006153)	SH2D6 (ENSMMNG00015006178)	CAPG (ENSMMNG00015006216)	ELMOD3 (ENSMMNG00015006250)	RETSAT (ENSMMNG00015006280)	ENSMMNG00015006302	TCF7L1 (ENSMMNG00015006319)	KCMF1 (ENSMMNG00015006344)	TMSB10 (ENSMMNG00015006357)	ENSMMNG00015006372	DNAH6 (ENSMMNG00015006430)
Pecora	ANCESTRAL SPECIES	5	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Yarkand deer	MODERN SPECIES	2	RNF103 (ENSCHYG00000007209)	CHMP3 (ENSCHYG00000007238)	KDM3A (ENSCHYG00000007307)	REEP1 (ENSCHYG00000007409)	MRPL35 (ENSCHYG00000007551)	IMMT (ENSCHYG00000007615)	PTCD3 (ENSCHYG00000007717)	POLR1A (ENSCHYG00000007959)	ST3GAL5 (ENSCHYG00000008185)	ATOH8 (ENSCHYG00000008328)	ENSCHYG00000008347	ENSCHYG00000008369	SFTPB (ENSCHYG00000008422)	USP39 (ENSCHYG00000008478)	C2orf68 (ENSCHYG00000008648)	TMEM150A (ENSCHYG00000008687) ##22	RNF181 (ENSCHYG00000008920)	VAMP8 (ENSCHYG00000008959)	GGCX (ENSCHYG00000009020)	MAT2A (ENSCHYG00000009334)	ENSCHYG00000009409	ENSCHYG00000009746	ELMOD3 (ENSCHYG00000009802)	RETSAT (ENSCHYG00000010029)	ENSCHYG00000010201	ENSCHYG00000010219	TCF7L1 (ENSCHYG00000010256)	KCMF1 (ENSCHYG00000010620)	TMSB10 (ENSCHYG00000010662)	DNAH6 (ENSCHYG00000010726)	SUCLG1 (ENSCHYG00000010947)
Percora_a	ANCESTRAL SPECIES	13	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Siberian musk deer	MODERN SPECIES	243	RMND5A (ENSMMSG00000013127)	RNF103 (ENSMMSG00000013106)	CHMP3 (ENSMMSG00000013070)	KDM3A (ENSMMSG00000013019)	REEP1 (ENSMMSG00000012954)	MRPL35 (ENSMMSG00000012898)	IMMT (ENSMMSG00000012806)	PTCD3 (ENSMMSG00000012741)	POLR1A (ENSMMSG00000012542)	ST3GAL5 (ENSMMSG00000012427)	ATOH8 (ENSMMSG00000012402)	ENSMMSG00000012385	SFTPB (ENSMMSG00000012359)	USP39 (ENSMMSG00000012147)	C2orf68 (ENSMMSG00000012110)	TMEM150A (ENSMMSG00000012073) ##22	RNF181 (ENSMMSG00000012036)	VAMP5 (ENSMMSG00000012013)	VAMP8 (ENSMMSG00000011993)	GGCX (ENSMMSG00000011896)	ENSMMSG00000011818	SH2D6 (ENSMMSG00000011734)	CAPG (ENSMMSG00000011668)	ELMOD3 (ENSMMSG00000011616)	RETSAT (ENSMMSG00000011571)	ENSMMSG00000011551	TCF7L1 (ENSMMSG00000011504)	KCMF1 (ENSMMSG00000011415)	ENSMMSG00000011387	DNAH6 (ENSMMSG00000011077)	SUCLG1 (ENSMMSG00000011015)
Bovidae	ANCESTRAL SPECIES	5	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Caprinae	ANCESTRAL SPECIES	9	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Rambouillet Sheep	MODERN SPECIES	19	RNF103 (ENSOARG00020000682)	CHMP3 (ENSOARG00020000661)	KDM3A (ENSOARG00020000585)	REEP1 (ENSOARG00020000378)	MRPL35 (ENSOARG00020000311)	IMMT (ENSOARG00020000246)	PTCD3 (ENSOARG00020000168)	POLR1A (ENSOARG00020003653)	ST3GAL5 (ENSOARG00020003555)	ATOH8 (ENSOARG00020003526)	ENSOARG00020003492	ENSOARG00020003392	SFTPB (ENSOARG00020003261)	USP39 (ENSOARG00020003123)	C2orf68 (ENSOARG00020003094)	TMEM150A (ENSOARG00020003074) ##22	RNF181 (ENSOARG00020003033)	VAMP5 (ENSOARG00020003011)	ENSOARG00020002994	MAT2A (ENSOARG00020002979)	SH2D6 (ENSOARG00020002951)	CAPG (ENSOARG00020002936)	ELMOD3 (ENSOARG00020002916)	GGCX (ENSOARG00020002878)	ENSOARG00020002845	TCF7L1 (ENSOARG00020002813)	KCMF1 (ENSOARG00020002774)	TMSB10 (ENSOARG00020002756)	DNAH6 (ENSOARG00020002647)	SUCLG1 (ENSOARG00020002604)	ENSOARG00020002597
Goat	MODERN SPECIES	2	RNF103 (ENSCHIG00000015167)	CHMP3 (ENSCHIG00000024764)	KDM3A (ENSCHIG00000012854)	REEP1 (ENSCHIG00000015577)	MRPL35 (ENSCHIG00000016097)	IMMT (ENSCHIG00000026338)	PTCD3 (ENSCHIG00000012077)	POLR1A (ENSCHIG00000018204)	ST3GAL5 (ENSCHIG00000021591)	ATOH8 (ENSCHIG00000011327)	ENSCHIG00000024407	ENSCHIG00000016379	SFTPB (ENSCHIG00000025259)	USP39 (ENSCHIG00000021013)	C2orf68 (ENSCHIG00000026643)	TMEM150A (ENSCHIG00000020450) ##22	RNF181 (ENSCHIG00000008537)	VAMP5 (ENSCHIG00000026930)	VAMP8 (ENSCHIG00000016859)	GGCX (ENSCHIG00000014770)	MAT2A (ENSCHIG00000026409)	ENSCHIG00000009669	CAPG (ENSCHIG00000021024)	ELMOD3 (ENSCHIG00000024857)	RETSAT (ENSCHIG00000007516)	ENSCHIG00000019585	TCF7L1 (ENSCHIG00000010768)	ENSCHIG00000009524	ENSCHIG00000009602	KCMF1 (ENSCHIG00000000578)	ENSCHIG00000017397
Bovinae	ANCESTRAL SPECIES	4	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a.a	ENSGT00390000002975.a.b	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
American bison	MODERN SPECIES	3338	CHMP3 (ENSBBBG00000019054)	KDM3A (ENSBBBG00000019138)	REEP1 (ENSBBBG00000019198)	MRPL35 (ENSBBBG00000019211)	IMMT (ENSBBBG00000019237)	PTCD3 (ENSBBBG00000007099)	POLR1A (ENSBBBG00000007513)	ENSBBBG00000019343	ST3GAL5 (ENSBBBG00000019418)	ATOH8 (ENSBBBG00000005211)	ENSBBBG00000006905	ENSBBBG00000005222	ENSBBBG00000019476	SFTPB (ENSBBBG00000005209)	USP39 (ENSBBBG00000019591)	TMEM150A (ENSBBBG00000019657) ##22	RNF181 (ENSBBBG00000005186)	VAMP5 (ENSBBBG00000019660)	VAMP8 (ENSBBBG00000007673)	GGCX (ENSBBBG00000019704)	MAT2A (ENSBBBG00000019713)	ENSBBBG00000019725	CAPG (ENSBBBG00000005165)	ELMOD3 (ENSBBBG00000019773)	RETSAT (ENSBBBG00000019791)	ENSBBBG00000019799	TCF7L1 (ENSBBBG00000019828)	ENSBBBG00000019847	TMSB10 (ENSBBBG00000019860)	DNAH6 (ENSBBBG00000019994)	SUCLG1 (ENSBBBG00000020010)
Bos	ANCESTRAL SPECIES	5	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a.a.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Bos_a	ANCESTRAL SPECIES	6	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876.f	ENSGT00390000016876.e	ENSGT00920000149138	ENSGT00390000016950.g	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.a.a.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Wild yak	MODERN SPECIES	422												ENSBMUG00000025477	SFTPB (ENSBMUG00000025482)	USP39 (ENSBMUG00000025495)	C2orf68 (ENSBMUG00000025510)	TMEM150A (ENSBMUG00000025520) ##22	RNF181 (ENSBMUG00000025527)	VAMP5 (ENSBMUG00000025532)	VAMP8 (ENSBMUG00000025534)	GGCX (ENSBMUG00000025542)	MAT2A (ENSBMUG00000025546)	ENSBMUG00000025549	CAPG (ENSBMUG00000025555)	ELMOD3 (ENSBMUG00000025564)	RETSAT (ENSBMUG00000025572)	ENSBMUG00000025576	TCF7L1 (ENSBMUG00000025596)	KCMF1 (ENSBMUG00000025612)	TMSB10 (ENSBMUG00000025623)
Domestic yak	MODERN SPECIES	28	REEP1 (ENSBGRG00000019246)	ENSBGRG00000003586	ENSBGRG00000003654	IMMT (ENSBGRG00000003684)	ENSBGRG00000004052	ENSBGRG00000004172	POLR1A (ENSBGRG00000004230)	ENSBGRG00000004581	ST3GAL5 (ENSBGRG00000004605)	ATOH8 (ENSBGRG00000004693)	ENSBGRG00000004722	ENSBGRG00000004844	SFTPB (ENSBGRG00000004867)	USP39 (ENSBGRG00000004978)	C2orf68 (ENSBGRG00000005435)	TMEM150A (ENSBGRG00000005475) ##22	RNF181 (ENSBGRG00000005520)	VAMP5 (ENSBGRG00000005556)	VAMP8 (ENSBGRG00000005579)	GGCX (ENSBGRG00000005624)	MAT2A (ENSBGRG00000005776)	SH2D6 (ENSBGRG00000005852)	CAPG (ENSBGRG00000005930)	ELMOD3 (ENSBGRG00000005978)	RETSAT (ENSBGRG00000006129)	ENSBGRG00000006196	TCF7L1 (ENSBGRG00000006205)	ENSBGRG00000006276	KCMF1 (ENSBGRG00000006294)	TMSB10 (ENSBGRG00000006399)	DNAH6 (ENSBGRG00000006436)
Bos_b	ANCESTRAL SPECIES	16											ENSGT00390000002975.a.a.a	ENSGT00390000002975.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT01100000263481.n.a.a.a.b.b.b.a.a.a.b.a.b	ENSGT00940000165681	ENSGT00940000154761
Hybrid Bos Indicus	MODERN SPECIES	2	RNF103 (ENSBIXG00005007108)	KDM3A (ENSBIXG00005012655)	REEP1 (ENSBIXG00005001387)	MRPL35 (ENSBIXG00005001353)	IMMT (ENSBIXG00005012441)	PTCD3 (ENSBIXG00005012368)	POLR1A (ENSBIXG00005012344)	ST3GAL5 (ENSBIXG00005000387)	ATOH8 (ENSBIXG00005001275)	ENSBIXG00005012225	ENSBIXG00005012155	ENSBIXG00005012133	SFTPB (ENSBIXG00005012111)	USP39 (ENSBIXG00005012067)	C2orf68 (ENSBIXG00005011982)	TMEM150A (ENSBIXG00005011956) ##22	RNF181 (ENSBIXG00005011916)	VAMP5 (ENSBIXG00005001186)	VAMP8 (ENSBIXG00005011878)	GGCX (ENSBIXG00005011842)	MAT2A (ENSBIXG00005011796)	ENSBIXG00005011750	CAPG (ENSBIXG00005011729)	ELMOD3 (ENSBIXG00005011661)	RETSAT (ENSBIXG00005001146)	ENSBIXG00005011629	TCF7L1 (ENSBIXG00005011607)	KCMF1 (ENSBIXG00005011582)	ENSBIXG00005011559	ENSBIXG00005001125	ENSBIXG00005011532
Cow	MODERN SPECIES	2	MRPL35 (ENSBTAG00000004823)	IMMT (ENSBTAG00000003307)	ENSBTAG00000054392	PTCD3 (ENSBTAG00000006482)	POLR1A (ENSBTAG00000006481)	ST3GAL5 (ENSBTAG00000011601)	ATOH8 (ENSBTAG00000024000)	ENSBTAG00000047816	ENSBTAG00000039981	ENSBTAG00000047449	GNLY (ENSBTAG00000053497)	ENSBTAG00000031828	SFTPB (ENSBTAG00000021230)	USP39 (ENSBTAG00000010691)	C11H2orf68 (ENSBTAG00000018291)	TMEM150A (ENSBTAG00000018289) ##22	RNF181 (ENSBTAG00000018286)	VAMP5 (ENSBTAG00000018285)	VAMP8 (ENSBTAG00000023997)	GGCX (ENSBTAG00000038477)	MAT2A (ENSBTAG00000020873)	ENSBTAG00000048587	CAPG (ENSBTAG00000005432)	ELMOD3 (ENSBTAG00000021935)	RETSAT (ENSBTAG00000021934)	ENSBTAG00000038116	TCF7L1 (ENSBTAG00000010111)	HIGD1A (ENSBTAG00000031731)	KCMF1 (ENSBTAG00000020630)	ENSBTAG00000048762	TMSB10 (ENSBTAG00000005654)
Laurasiatheria_b	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Carnivora	ANCESTRAL SPECIES	19	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Felidae	ANCESTRAL SPECIES	3	ENSGT00940000156588.h	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.k	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Panthera	ANCESTRAL SPECIES	2	ENSGT00940000156588.g	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.k	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Tiger	MODERN SPECIES	170	ENSPTIG00000010998	CD8A (ENSPTIG00000009864)	RMND5A (ENSPTIG00000008724)	RNF103 (ENSPTIG00000008667)	CHMP3 (ENSPTIG00000008355)	KDM3A (ENSPTIG00000003722)	REEP1 (ENSPTIG00000020564)	ENSPTIG00000019867	IMMT (ENSPTIG00000019189)	PTCD3 (ENSPTIG00000019091)	POLR1A (ENSPTIG00000018783)	ST3GAL5 (ENSPTIG00000017771)	SFTPB (ENSPTIG00000016782)	USP39 (ENSPTIG00000015767)	C2orf68 (ENSPTIG00000015638)	TMEM150A (ENSPTIG00000015089) ##22	RNF181 (ENSPTIG00000014685)	VAMP5 (ENSPTIG00000014511)	VAMP8 (ENSPTIG00000014405)	GGCX (ENSPTIG00000013923)	MAT2A (ENSPTIG00000013684)	ENSPTIG00000013587	CAPG (ENSPTIG00000013355)	ELMOD3 (ENSPTIG00000012942)	RETSAT (ENSPTIG00000012901)	ENSPTIG00000012874	TCF7L1 (ENSPTIG00000012726)	KCMF1 (ENSPTIG00000012661)
Panthera_a	ANCESTRAL SPECIES	1	ENSGT00940000156588.h	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.k	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
lion	MODERN SPECIES	3	ENSPLOG00000001295	RMND5A (ENSPLOG00000001336)	RNF103 (ENSPLOG00000001372)	CHMP3 (ENSPLOG00000001384)	KDM3A (ENSPLOG00000001402)	REEP1 (ENSPLOG00000001464)	MRPL35 (ENSPLOG00000001537)	IMMT (ENSPLOG00000001563)	PTCD3 (ENSPLOG00000001609)	POLR1A (ENSPLOG00000001675)	ST3GAL5 (ENSPLOG00000001752)	ATOH8 (ENSPLOG00000001776)	SFTPB (ENSPLOG00000001786)	USP39 (ENSPLOG00000001816)	C2orf68 (ENSPLOG00000001851)	TMEM150A (ENSPLOG00000001876) ##22	RNF181 (ENSPLOG00000001904)	VAMP5 (ENSPLOG00000001920)	VAMP8 (ENSPLOG00000001925)	GGCX (ENSPLOG00000001958)	MAT2A (ENSPLOG00000002012)	SH2D6 (ENSPLOG00000002043)	CAPG (ENSPLOG00000002073)	ELMOD3 (ENSPLOG00000002100)	RETSAT (ENSPLOG00000002122)	ENSPLOG00000002132	TCF7L1 (ENSPLOG00000002149)	KCMF1 (ENSPLOG00000002171)	TMSB10 (ENSPLOG00000002183)	TRABD2A (ENSPLOG00000002215)	DNAH6 (ENSPLOG00000002257)
leopard	MODERN SPECIES		ENSPPRG00000006413	RMND5A (ENSPPRG00000006426)	RNF103 (ENSPPRG00000006438)	CHMP3 (ENSPPRG00000006445)	KDM3A (ENSPPRG00000006509)	REEP1 (ENSPPRG00000006542)	ENSPPRG00000006561	IMMT (ENSPPRG00000006625)	PTCD3 (ENSPPRG00000006644)	POLR1A (ENSPPRG00000006702)	ST3GAL5 (ENSPPRG00000006759)	ATOH8 (ENSPPRG00000006780)	SFTPB (ENSPPRG00000006829)	USP39 (ENSPPRG00000006971)	C2orf68 (ENSPPRG00000006996)	TMEM150A (ENSPPRG00000007030) ##22	RNF181 (ENSPPRG00000007048)	VAMP5 (ENSPPRG00000007056)	VAMP8 (ENSPPRG00000007071)	GGCX (ENSPPRG00000007103)	MAT2A (ENSPPRG00000007128)	ENSPPRG00000007139	CAPG (ENSPPRG00000007161)	ELMOD3 (ENSPPRG00000007176)	RETSAT (ENSPPRG00000007198)	ENSPPRG00000007210	TCF7L1 (ENSPPRG00000007227)	KCMF1 (ENSPPRG00000007234)	TRABD2A (ENSPPRG00000007266)	DNAH6 (ENSPPRG00000007406)	SUCLG1 (ENSPPRG00000007440)
Cat	MODERN SPECIES	2	CD8A (ENSFCAG00000014826)	RMND5A (ENSFCAG00000027668)	RNF103 (ENSFCAG00000013620)	CHMP3 (ENSFCAG00000039184)	KDM3A (ENSFCAG00000010506)	REEP1 (ENSFCAG00000008970)	ENSFCAG00000040448	IMMT (ENSFCAG00000008968)	PTCD3 (ENSFCAG00000008967)	POLR1A (ENSFCAG00000008966)	ST3GAL5 (ENSFCAG00000015447)	ATOH8 (ENSFCAG00000038037)	SFTPB (ENSFCAG00000018868)	USP39 (ENSFCAG00000011972)	CA3H2orf68 (ENSFCAG00000028683)	TMEM150A (ENSFCAG00000024246) ##22	RNF181 (ENSFCAG00000011969)	VAMP5 (ENSFCAG00000024700)	VAMP8 (ENSFCAG00000011968)	GGCX (ENSFCAG00000011967)	MAT2A (ENSFCAG00000011965)	SH2D6 (ENSFCAG00000003381)	CAPG (ENSFCAG00000003379)	ELMOD3 (ENSFCAG00000003378)	RETSAT (ENSFCAG00000003377)	ENSFCAG00000037179	TCF7L1 (ENSFCAG00000003376)	KCMF1 (ENSFCAG00000044295)	TMSB10 (ENSFCAG00000046545)	TRABD2A (ENSFCAG00000000770)	DNAH6 (ENSFCAG00000000768)
Caniformia	ANCESTRAL SPECIES	18	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Canidae	ANCESTRAL SPECIES	25	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.c	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371.c	ENSGT00940000160325.b.c	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Canis_lupus	ANCESTRAL SPECIES	10	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975.c	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371.c	ENSGT00940000160325.b.c	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Dingo	MODERN SPECIES	223	RMND5A (ENSCAFG00020016423)	RNF103 (ENSCAFG00020016419)	CHMP3 (ENSCAFG00020016418)	KDM3A (ENSCAFG00020016056)	REEP1 (ENSCAFG00020016020)	MRPL35 (ENSCAFG00020016017)	IMMT (ENSCAFG00020015997)	PTCD3 (ENSCAFG00020015827)	POLR1A (ENSCAFG00020014752)	ST3GAL5 (ENSCAFG00020014720)	ATOH8 (ENSCAFG00020014718)	ENSCAFG00020014715	SFTPB (ENSCAFG00020014705)	USP39 (ENSCAFG00020014690)	C2orf68 (ENSCAFG00020014687)	TMEM150A (ENSCAFG00020014685) ##22	RNF181 (ENSCAFG00020014682)	ENSCAFG00020014680	ENSCAFG00020014679	GGCX (ENSCAFG00020014674)	MAT2A (ENSCAFG00020014669)	ENSCAFG00020014664	CAPG (ENSCAFG00020014661)	ELMOD3 (ENSCAFG00020014656)	RETSAT (ENSCAFG00020014651)	ENSCAFG00020014645	TCF7L1 (ENSCAFG00020014607)	ENSCAFG00020014602	ENSCAFG00020014601	ENSCAFG00020014600	ENSCAFG00020014598
Dog	MODERN SPECIES	8	RNF103 (ENSCAFG00845013134)	CHMP3 (ENSCAFG00845013177)	KDM3A (ENSCAFG00845013222)	REEP1 (ENSCAFG00845013348)	MRPL35 (ENSCAFG00845013398)	IMMT (ENSCAFG00845013443)	PTCD3 (ENSCAFG00845013553)	POLR1A (ENSCAFG00845013628)	ST3GAL5 (ENSCAFG00845013809)	ATOH8 (ENSCAFG00845013832)	ENSCAFG00845013890	ENSCAFG00845013982	SFTPB (ENSCAFG00845014035)	USP39 (ENSCAFG00845014083)	C17H2orf68 (ENSCAFG00845014119)	TMEM150A (ENSCAFG00845014140) ##22	RNF181 (ENSCAFG00845014162)	VAMP5 (ENSCAFG00845014173)	VAMP8 (ENSCAFG00845014183)	GGCX (ENSCAFG00845014233)	MAT2A (ENSCAFG00845014310)	SH2D6 (ENSCAFG00845014343)	CAPG (ENSCAFG00845014410)	ELMOD3 (ENSCAFG00845014524)	RETSAT (ENSCAFG00845014569)	ENSCAFG00845014600	TCF7L1 (ENSCAFG00845014626)	ENSCAFG00845014677	ENSCAFG00845014717	TRABD2A (ENSCAFG00845014743)	DNAH6 (ENSCAFG00845014818)
Red fox	MODERN SPECIES	16	RNF103 (ENSVVUG00000028764)	CHMP3 (ENSVVUG00000028766)	KDM3A (ENSVVUG00000028770)	REEP1 (ENSVVUG00000028774)	MRPL35 (ENSVVUG00000000063)	IMMT (ENSVVUG00000000129)	PTCD3 (ENSVVUG00000001203)	POLR1A (ENSVVUG00000001245)	ST3GAL5 (ENSVVUG00000001293)	ATOH8 (ENSVVUG00000001304)	ENSVVUG00000001338	ENSVVUG00000001345	SFTPB (ENSVVUG00000001389)	USP39 (ENSVVUG00000001660)	CUNH2orf68 (ENSVVUG00000001683)	TMEM150A (ENSVVUG00000001694) ##22	RNF181 (ENSVVUG00000001710)	ENSVVUG00000001721	VAMP8 (ENSVVUG00000001728)	GGCX (ENSVVUG00000001756)	MAT2A (ENSVVUG00000001771)	ENSVVUG00000001782	CAPG (ENSVVUG00000001799)	ELMOD3 (ENSVVUG00000001825)	RETSAT (ENSVVUG00000001843)	TGOLN2 (ENSVVUG00000001860)	TCF7L1 (ENSVVUG00000001883)	KCMF1 (ENSVVUG00000002440)	TRABD2A (ENSVVUG00000002449)	DNAH6 (ENSVVUG00000002546)	SUCLG1 (ENSVVUG00000003108)
Caniformia_b	ANCESTRAL SPECIES	11	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Mustelinae	ANCESTRAL SPECIES	16	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
American mink	MODERN SPECIES	8	ENSNVIG00000017979	RMD5A (ENSNVIG00000017991)	RNF103 (ENSNVIG00000018074)	CHMP3 (ENSNVIG00000018078)	KDM3A (ENSNVIG00000018097)	REEP1 (ENSNVIG00000018129)	MRPL35 (ENSNVIG00000018218)	IMMT (ENSNVIG00000018239)	PTCD3 (ENSNVIG00000018319)	POLR1A (ENSNVIG00000018346)	ST3GAL5 (ENSNVIG00000018397)	ATOH8 (ENSNVIG00000018445)	SFTPB (ENSNVIG00000018449)	ENSNVIG00000018464	C2orf68 (ENSNVIG00000018547)	TMEM150A (ENSNVIG00000018553) ##22	RNF181 (ENSNVIG00000018591)	VAMP5 (ENSNVIG00000018599)	VAMP8 (ENSNVIG00000018603)	GGCX (ENSNVIG00000018617)	MAT2A (ENSNVIG00000018646)	ENSNVIG00000018664	CAPG (ENSNVIG00000018696)	ELMD3 (ENSNVIG00000018754)	RETSAT (ENSNVIG00000018862)	ENSNVIG00000018872	TCF7L1 (ENSNVIG00000018900)	KCMF1 (ENSNVIG00000018936)	TMSB10 (ENSNVIG00000018969)	TRABD2A (ENSNVIG00000018979)	DNAH6 (ENSNVIG00000019022)
Ferret	MODERN SPECIES	169	RNF103 (ENSMPUG00000009290)	ENSMPUG00000009282	CHMP3 (ENSMPUG00000009273)	KDM3A (ENSMPUG00000009253)	REEP1 (ENSMPUG00000009225)	MRPL35 (ENSMPUG00000009217)	IMMT (ENSMPUG00000009193)	PTCD3 (ENSMPUG00000009167)	POLR1A (ENSMPUG00000009135)	ST3GAL5 (ENSMPUG00000009127)	ATOH8 (ENSMPUG00000009121)	ENSMPUG00000009117	SFTPB (ENSMPUG00000009109)	USP39 (ENSMPUG00000009096)	C2orf68 (ENSMPUG00000009069)	TMEM150A (ENSMPUG00000009058) ##22	RNF181 (ENSMPUG00000009053)	VAMP5 (ENSMPUG00000009046)	VAMP8 (ENSMPUG00000009038)	GGCX (ENSMPUG00000009028)	MAT2A (ENSMPUG00000008933)	SH2D6 (ENSMPUG00000008909)	CAPG (ENSMPUG00000008841)	ELMOD3 (ENSMPUG00000008834)	RETSAT (ENSMPUG00000008763)	ENSMPUG00000008755	TCF7L1 (ENSMPUG00000008657)	KCMF1 (ENSMPUG00000008632)	TRABD2A (ENSMPUG00000008622)	DNAH6 (ENSMPUG00000008574)	SUCLG1 (ENSMPUG00000008566)
Ursidae	ANCESTRAL SPECIES	9	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305.b	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000165681	ENSGT00940000162805	ENSGT00940000154761
Giant Panda	MODERN SPECIES	14	ENSAMEG00000010027	ENSAMEG00000010008	RMND5A (ENSAMEG00000009979)	RNF103 (ENSAMEG00000009973)	CHMP3 (ENSAMEG00000009971)	KDM3A (ENSAMEG00000009939)	REEP1 (ENSAMEG00000024084)	MRPL35 (ENSAMEG00000005978)	IMMT (ENSAMEG00000005919)	PTCD3 (ENSAMEG00000005861)	POLR1A (ENSAMEG00000005807)	ST3GAL5 (ENSAMEG00000005791)	ATOH8 (ENSAMEG00000025438)	SFTPB (ENSAMEG00000002317)	C2orf68 (ENSAMEG00000002290)	ENSAMEG00000002282 ##22	USP39 (ENSAMEG00000002291)	VAMP5 (ENSAMEG00000031349)	VAMP8 (ENSAMEG00000002268)	GGCX (ENSAMEG00000002214)	MAT2A (ENSAMEG00000002191)	ENSAMEG00000028845	CAPG (ENSAMEG00000002173)	ENSAMEG00000002137	RETSAT (ENSAMEG00000002091)	ENSAMEG00000031071	TCF7L1 (ENSAMEG00000002051)	TRABD2A (ENSAMEG00000002027)	DNAH6 (ENSAMEG00000002004)	SUCLG1 (ENSAMEG00000001962)	ENSAMEG00000018718
Ursus	ANCESTRAL SPECIES	55	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305.b	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000154761	ENSGT00940000156351	ENSGT01030000234543.A.a
American black bear	MODERN SPECIES	520													SFTPB (ENSUAMG00000027593)	USP39 (ENSUAMG00000027590)	C2orf68 (ENSUAMG00000027589)	TMEM150A (ENSUAMG00000027587) ##22	RNF181 (ENSUAMG00000027586)	VAMP5 (ENSUAMG00000027585)	VAMP8 (ENSUAMG00000027584)	GGCX (ENSUAMG00000027583)	MAT2A (ENSUAMG00000027582)	ENSUAMG00000027581	CAPG (ENSUAMG00000027580)	ELMOD3 (ENSUAMG00000027578)	RETSAT (ENSUAMG00000027577)	ENSUAMG00000027574	TCF7L1 (ENSUAMG00000027565)	KCMF1 (ENSUAMG00000027562)
Polar bear	MODERN SPECIES	223	CD8A (ENSUMAG00000008020)	RMND5A (ENSUMAG00000008010)	RNF103 (ENSUMAG00000007975)	CHMP3 (ENSUMAG00000007971)	KDM3A (ENSUMAG00000007948)	REEP1 (ENSUMAG00000007896)	MRPL35 (ENSUMAG00000007891)	IMMT (ENSUMAG00000007873)	PTCD3 (ENSUMAG00000007839)	POLR1A (ENSUMAG00000006700)	ST3GAL5 (ENSUMAG00000006591)	ENSUMAG00000006576	SFTPB (ENSUMAG00000006563)	USP39 (ENSUMAG00000006527)	C2orf68 (ENSUMAG00000006518)	TMEM150A (ENSUMAG00000006515) ##22	RNF181 (ENSUMAG00000006514)	ENSUMAG00000006511	VAMP8 (ENSUMAG00000006509)	GGCX (ENSUMAG00000006501)	MAT2A (ENSUMAG00000006459)	ENSUMAG00000006447	CAPG (ENSUMAG00000006430)	ELMOD3 (ENSUMAG00000006414)	RETSAT (ENSUMAG00000006406)	ENSUMAG00000006403	TCF7L1 (ENSUMAG00000006395)	KCMF1 (ENSUMAG00000006381)	DNAH6 (ENSUMAG00000006234)	SUCLG1 (ENSUMAG00000006187)	ENSUMAG00000006177
Laurasiatheria_c	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Equus	ANCESTRAL SPECIES	7	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000165681	ENSGT00940000162805	ENSGT00940000154761
Donkey	MODERN SPECIES	26	RMND5A (ENSEASG00005001707)	RNF103 (ENSEASG00005001693)	CHMP3 (ENSEASG00005001683)	KDM3A (ENSEASG00005001676)	REEP1 (ENSEASG00005001661)	MRPL35 (ENSEASG00005001655)	IMMT (ENSEASG00005001647)	PTCD3 (ENSEASG00005001638)	POLR1A (ENSEASG00005001625)	ST3GAL5 (ENSEASG00005001613)	ATOH8 (ENSEASG00005001607)	ENSEASG00005001603	SFTPB (ENSEASG00005001518)	USP39 (ENSEASG00005001505)	ENSEASG00005033768	TMEM150A (ENSEASG00005001495) ##22	RNF181 (ENSEASG00005029086)	VAMP5 (ENSEASG00005001487)	VAMP8 (ENSEASG00005023642)	GGCX (ENSEASG00005001468)	MAT2A (ENSEASG00005001463)	SH2D6 (ENSEASG00005001453)	CAPG (ENSEASG00005001445)	ENSEASG00005001441	RETSAT (ENSEASG00005027102)	ENSEASG00005001427	TCF7L1 (ENSEASG00005001412)	ENSEASG00005030964	ENSEASG00005001404	ENSEASG00005032677	TRABD2A (ENSEASG00005001397)
Horse	MODERN SPECIES	6	ENSECAG00000053233	RNF103 (ENSECAG00000022304)	CHMP3 (ENSECAG00000007123)	KDM3A (ENSECAG00000007369)	REEP1 (ENSECAG00000024247)	MRPL35 (ENSECAG00000048642)	IMMT (ENSECAG00000024569)	ENSECAG00000048487	PTCD3 (ENSECAG00000020623)	POLR1A (ENSECAG00000010092)	ST3GAL5 (ENSECAG00000011464)	ATOH8 (ENSECAG00000039231)	GNLY (ENSECAG00000015819)	SFTPB (ENSECAG00000019375)	USP39 (ENSECAG00000002856)	TMEM150A (ENSECAG00000017462) ##22	RNF181 (ENSECAG00000000327)	VAMP5 (ENSECAG00000007788)	VAMP8 (ENSECAG00000009514)	GGCX (ENSECAG00000010458)	MAT2A (ENSECAG00000007391)	SH2D6 (ENSECAG00000013097)	CAPG (ENSECAG00000015128)	ELMOD3 (ENSECAG00000020629)	RETSAT (ENSECAG00000010342)	ENSECAG00000037048	TCF7L1 (ENSECAG00000022931)	TRABD2A (ENSECAG00000010499)	KCMF1 (ENSECAG00000024834)	ENSECAG00000038584	DNAH6 (ENSECAG00000011573)
Chiroptera	ANCESTRAL SPECIES	10	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00910000146589	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Microchiroptera	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00910000146589	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Greater horseshoe bat	MODERN SPECIES	4	RMND5A (ENSRFEG00010009064)	RNF103 (ENSRFEG00010009112)	CHMP3 (ENSRFEG00010009136)	KDM3A (ENSRFEG00010009255)	REEP1 (ENSRFEG00010009322)	MRPL35 (ENSRFEG00010009536)	IMMT (ENSRFEG00010009645)	PTCD3 (ENSRFEG00010010292)	POLR1A (ENSRFEG00010010422)	ST3GAL5 (ENSRFEG00010010531)	ATOH8 (ENSRFEG00010010652)	ENSRFEG00010010730	SFTPB (ENSRFEG00010010754)	USP39 (ENSRFEG00010010822)	C2orf68 (ENSRFEG00010011347)	TMEM150A (ENSRFEG00010011398) ##22	ENSRFEG00010011487	VAMP8 (ENSRFEG00010011634)	GGCX (ENSRFEG00010011702)	MAT2A (ENSRFEG00010011814)	ENSRFEG00010011863	CAPG (ENSRFEG00010011887)	ELMOD3 (ENSRFEG00010011983)	RETSAT (ENSRFEG00010012053)	ENSRFEG00010012085	TCF7L1 (ENSRFEG00010012140)	ENSRFEG00010012190	KCMF1 (ENSRFEG00010012206)	TMSB10 (ENSRFEG00010012256)	DNAH6 (ENSRFEG00010012455)	SUCLG1 (ENSRFEG00010013453)
Microbat	MODERN SPECIES	1706												ENSMLUG00000001579	SFTPB (ENSMLUG00000005372)	USP39 (ENSMLUG00000005367)	C2orf68 (ENSMLUG00000005365)	TMEM150A (ENSMLUG00000026810) ##22	RNF181 (ENSMLUG00000027738)	VAMP5 (ENSMLUG00000028456)	VAMP8 (ENSMLUG00000005363)	GGCX (ENSMLUG00000005356)	MAT2A (ENSMLUG00000005348)
Megabat	MODERN SPECIES	2127												ENSPVAG00000015360	SFTPB (ENSPVAG00000015359)	USP39 (ENSPVAG00000015356)	C2orf68 (ENSPVAG00000015355)	TMEM150A (ENSPVAG00000015354) ##22	RNF181 (ENSPVAG00000015352)	VAMP5 (ENSPVAG00000015351)	VAMP8 (ENSPVAG00000015348)	GGCX (ENSPVAG00000015347)	MAT2A (ENSPVAG00000015346)
Euarchontoglires	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Primates	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Strepsirrhini	ANCESTRAL SPECIES	13	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901.o.a	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Lemuriformes	ANCESTRAL SPECIES	19	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901.o.a	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Mouse lemur	MODERN SPECIES	26	RMND5A (ENSMICG00000047554)	ENSMICG00000033876	RNF103 (ENSMICG00000038067)	ENSMICG00000005492	KDM3A (ENSMICG00000000781)	REEP1 (ENSMICG00000000777)	MRPL35 (ENSMICG00000000776)	IMMT (ENSMICG00000000770)	PTCD3 (ENSMICG00000000761)	POLR1A (ENSMICG00000000757)	ST3GAL5 (ENSMICG00000045558)	ATOH8 (ENSMICG00000007934)	SFTPB (ENSMICG00000011514)	USP39 (ENSMICG00000011500)	C2orf68 (ENSMICG00000044296)	TMEM150A (ENSMICG00000026572) ##22	RNF181 (ENSMICG00000011489)	VAMP5 (ENSMICG00000011486)	ENSMICG00000035021	GGCX (ENSMICG00000011475)	MAT2A (ENSMICG00000011458)	ENSMICG00000015081	CAPG (ENSMICG00000015066)	ELMOD3 (ENSMICG00000014497)	RETSAT (ENSMICG00000016157)	ENSMICG00000041852	TCF7L1 (ENSMICG00000016146)	KCMF1 (ENSMICG00000046646)	TMSB10 (ENSMICG00000047627)	ENSMICG00000015388	ENSMICG00000035690
Lemuriformes_a	ANCESTRAL SPECIES	36	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901.o.a	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00910000147626	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761
Coquerels sifaka	MODERN SPECIES	300	CD8A (ENSPCOG00000015000)	RMND5A (ENSPCOG00000015308)	RNF103 (ENSPCOG00000022590)	CHMP3 (ENSPCOG00000018240)	KDM3A (ENSPCOG00000008403)	REEP1 (ENSPCOG00000004132)	MRPL35 (ENSPCOG00000007856)	IMMT (ENSPCOG00000028075)	PTCD3 (ENSPCOG00000005822)	POLR1A (ENSPCOG00000026987)	ST3GAL5 (ENSPCOG00000028704)	ATOH8 (ENSPCOG00000022872)	ENSPCOG00000027418	USP39 (ENSPCOG00000018540)	C2orf68 (ENSPCOG00000017415)	TMEM150A (ENSPCOG00000019283) ##22	RNF181 (ENSPCOG00000019878)	VAMP5 (ENSPCOG00000008979)	VAMP8 (ENSPCOG00000025762)	GGCX (ENSPCOG00000017501)	MAT2A (ENSPCOG00000013199)	ENSPCOG00000027552	CAPG (ENSPCOG00000017087)	ELMOD3 (ENSPCOG00000016503)	RETSAT (ENSPCOG00000018203)	TCF7L1 (ENSPCOG00000027574)	KCMF1 (ENSPCOG00000024804)	TMSB10 (ENSPCOG00000020577)	DNAH6 (ENSPCOG00000021699)	ENSPCOG00000012720
Greater bamboo lemur	MODERN SPECIES	614	CD8A (ENSPSMG00000022918)	RMND5A (ENSPSMG00000022926)	RNF103 (ENSPSMG00000022941)	CHMP3 (ENSPSMG00000022960)	KDM3A (ENSPSMG00000023071)	REEP1 (ENSPSMG00000023171)	ENSPSMG00000023191	IMMT (ENSPSMG00000023275)	PTCD3 (ENSPSMG00000023446)	POLR1A (ENSPSMG00000023525)	ST3GAL5 (ENSPSMG00000023620)	ATOH8 (ENSPSMG00000023652)	SFTPB (ENSPSMG00000023656)	USP39 (ENSPSMG00000023744)	C2orf68 (ENSPSMG00000023768)	TMEM150A (ENSPSMG00000023779) ##22	RNF181 (ENSPSMG00000023793)	VAMP5 (ENSPSMG00000023800)	VAMP8 (ENSPSMG00000023814)	GGCX (ENSPSMG00000023829)	MAT2A (ENSPSMG00000023856)
Bushbaby	MODERN SPECIES	262	ENSOGAG00000033216	ENSOGAG00000027674	RNF103 (ENSOGAG00000034488)	ENSOGAG00000030818	KDM3A (ENSOGAG00000011445)	REEP1 (ENSOGAG00000004049)	MRPL35 (ENSOGAG00000004048)	ENSOGAG00000004046	PTCD3 (ENSOGAG00000004040)	POLR1A (ENSOGAG00000004031)	ST3GAL5 (ENSOGAG00000016459)	ATOH8 (ENSOGAG00000025987)	SFTPB (ENSOGAG00000012294)	USP39 (ENSOGAG00000012291)	C2orf68 (ENSOGAG00000033817)	TMEM150A (ENSOGAG00000012288) ##22	RNF181 (ENSOGAG00000012284)	VAMP5 (ENSOGAG00000012283)	VAMP8 (ENSOGAG00000012281)	GGCX (ENSOGAG00000010470)	MAT2A (ENSOGAG00000026925)	CAPG (ENSOGAG00000001084)	ELMOD3 (ENSOGAG00000001081)	RETSAT (ENSOGAG00000001079)	ENSOGAG00000032714	TCF7L1 (ENSOGAG00000001078)	KCMF1 (ENSOGAG00000034863)	ENSOGAG00000002147	DNAH6 (ENSOGAG00000011781)	SUCLG1 (ENSOGAG00000004142)
Haplorrhini	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00390000017613.q	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805
Simiiformes	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00910000147328	ENSGT00910000146589	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00390000017613.q	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
Catarrhini	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00910000147626	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038
Cercopithecidae	ANCESTRAL SPECIES	18	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00910000147298	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038
Cercopithecinae	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038	ENSGT00510000047171
Vervet Monkey	MODERN SPECIES	5	CD8A (ENSCSAG00000016359)	RMND5A (ENSCSAG00000016355)	RNF103 (ENSCSAG00000016352)	CHMP3 (ENSCSAG00000016348)	KDM3A (ENSCSAG00000016343)	REEP1 (ENSCSAG00000016327)	IMMT (ENSCSAG00000016310)	PTCD3 (ENSCSAG00000016267)	POLR1A (ENSCSAG00000016251)	ST3GAL5 (ENSCSAG00000016237)	ATOH8 (ENSCSAG00000016234)	ENSCSAG00000016230	SFTPB (ENSCSAG00000016227)	USP39 (ENSCSAG00000016215)	C2orf68 (ENSCSAG00000016209)	TMEM150A (ENSCSAG00000016204) ##22	RNF181 (ENSCSAG00000016198)	VAMP5 (ENSCSAG00000016193)	VAMP8 (ENSCSAG00000016190)	GGCX (ENSCSAG00000016185)	MAT2A (ENSCSAG00000016171)	ENSCSAG00000016162	CAPG (ENSCSAG00000016141)	ELMOD3 (ENSCSAG00000016108)	RETSAT (ENSCSAG00000016104)	TGOLN2 (ENSCSAG00000016094)	TCF7L1 (ENSCSAG00000016081)	ENSCSAG00000019435	ENSCSAG00000016057	TRABD2A (ENSCSAG00000016047)	DNAH6 (ENSCSAG00000015982)
Cercopithecinae_a	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038	ENSGT00510000047171.t
Macaca	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313.g	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929.e	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038.f	ENSGT00940000157038.e
Macaca_a	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313.g	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929.e	ENSGT00940000161151	ENSGT01030000240253	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038.f	ENSGT00940000157038.e	ENSGT00510000047171.t	ENSGT00940000163007
Rhesus	MODERN SPECIES	4	ENSMMUG00000049442	RNF103 (ENSMMUG00000015778)	KDM3A (ENSMMUG00000013124)	REEP1 (ENSMMUG00000020930)	MRPL35 (ENSMMUG00000020932)	IMMT (ENSMMUG00000015824)	PTCD3 (ENSMMUG00000015820)	POLR1A (ENSMMUG00000015815)	ST3GAL5 (ENSMMUG00000019559)	ATOH8 (ENSMMUG00000047424)	ENSMMUG00000063583	SFTPB (ENSMMUG00000017818)	USP39 (ENSMMUG00000017820)	ENSMMUG00000051721	C13H2orf68 (ENSMMUG00000050980)	TMEM150A (ENSMMUG00000062509) ##22	RNF181 (ENSMMUG00000063098)	VAMP5 (ENSMMUG00000058122)	VAMP8 (ENSMMUG00000030785)	GGCX (ENSMMUG00000004446)	MAT2A (ENSMMUG00000004450)	SH2D6 (ENSMMUG00000009966)	CAPG (ENSMMUG00000002675)	ELMOD3 (ENSMMUG00000002673)	RETSAT (ENSMMUG00000019416)	TGOLN2 (ENSMMUG00000019417)	TCF7L1 (ENSMMUG00000020134)	KCMF1 (ENSMMUG00000001414)	ENSMMUG00000062644	TMSB10 (ENSMMUG00000056004)	ENSMMUG00000051834
Crab-eating macaque	MODERN SPECIES	4	RNF103 (ENSMFAG00000044056)	CHMP3 (ENSMFAG00000043771)	KDM3A (ENSMFAG00000046149)	REEP1 (ENSMFAG00000038270)	MRPL35 (ENSMFAG00000002964)	IMMT (ENSMFAG00000044373)	PTCD3 (ENSMFAG00000042757)	POLR1A (ENSMFAG00000046097)	ST3GAL5 (ENSMFAG00000043554)	ATOH8 (ENSMFAG00000031235)	ENSMFAG00000004079	ENSMFAG00000063745	SFTPB (ENSMFAG00000040839)	USP39 (ENSMFAG00000041090)	C2orf68 (ENSMFAG00000063159)	TMEM150A (ENSMFAG00000003805) ##22	RNF181 (ENSMFAG00000047260)	VAMP5 (ENSMFAG00000009769)	VAMP8 (ENSMFAG00000034493)	GGCX (ENSMFAG00000045991)	MAT2A (ENSMFAG00000002027)	ENSMFAG00000002993	CAPG (ENSMFAG00000003357)	ENSMFAG00000037110	ELMOD3 (ENSMFAG00000032988)	RETSAT (ENSMFAG00000001631)	TGOLN2 (ENSMFAG00000002786)	ENSMFAG00000035638	ENSMFAG00000057476	TCF7L1 (ENSMFAG00000043006)	KCMF1 (ENSMFAG00000044887)
Pig-tailed macaque	MODERN SPECIES	341		RNF103 (ENSMNEG00000030445)	ENSMNEG00000033992	KDM3A (ENSMNEG00000043870)	REEP1 (ENSMNEG00000035235)	MRPL35 (ENSMNEG00000043851)	IMMT (ENSMNEG00000030355)	PTCD3 (ENSMNEG00000032067)	POLR1A (ENSMNEG00000043313)	ENSMNEG00000032428	ATOH8 (ENSMNEG00000041664)	GNLY (ENSMNEG00000043254)	SFTPB (ENSMNEG00000030255)	USP39 (ENSMNEG00000040046)	C2orf68 (ENSMNEG00000043318)	TMEM150A (ENSMNEG00000014445) ##22	RNF181 (ENSMNEG00000040275)	VAMP5 (ENSMNEG00000036172)	VAMP8 (ENSMNEG00000036220)	GGCX (ENSMNEG00000023012)	MAT2A (ENSMNEG00000042382)	ENSMNEG00000042631	ENSMNEG00000030307	CAPG (ENSMNEG00000045231)	ELMOD3 (ENSMNEG00000035964)	RETSAT (ENSMNEG00000043728)	TGOLN2 (ENSMNEG00000034111)	ENSMNEG00000016717	ENSMNEG00000017672	TCF7L1 (ENSMNEG00000044913)	KCMF1 (ENSMNEG00000042627)
Cercopithecinae_b	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038	ENSGT00510000047171.s.a
Cercopithecinae_d	ANCESTRAL SPECIES	136		ENSGT00390000006413	ENSGT00950000182832.C.c.a	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00910000147298	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00390000012818.o.a.a.a.a	ENSGT00940000157038
Drill	MODERN SPECIES	1471										ST3GAL5 (ENSMLEG00000037788)	ATOH8 (ENSMLEG00000038096)	GNLY (ENSMLEG00000031388)	SFTPB (ENSMLEG00000034724)	USP39 (ENSMLEG00000030185)	C2orf68 (ENSMLEG00000037933)	TMEM150A (ENSMLEG00000033025) ##22	RNF181 (ENSMLEG00000029338)	VAMP5 (ENSMLEG00000036477)	VAMP8 (ENSMLEG00000036507)	GGCX (ENSMLEG00000029112)	MAT2A (ENSMLEG00000028877)	ENSMLEG00000030069	ENSMLEG00000033386	CAPG (ENSMLEG00000043889)	ELMOD3 (ENSMLEG00000044317)	RETSAT (ENSMLEG00000035987)	ENSMLEG00000042086	TGOLN2 (ENSMLEG00000032339)	TCF7L1 (ENSMLEG00000034494)	ENSMLEG00000019792
Sooty mangabey	MODERN SPECIES	123		RNF103 (ENSCATG00000040428)	CHMP3 (ENSCATG00000035889)	KDM3A (ENSCATG00000016041)	REEP1 (ENSCATG00000037544)	MRPL35 (ENSCATG00000037137)	IMMT (ENSCATG00000038962)	PTCD3 (ENSCATG00000036541)	POLR1A (ENSCATG00000029786)	ST3GAL5 (ENSCATG00000039141)	ATOH8 (ENSCATG00000042555)	GNLY (ENSCATG00000029047)	SFTPB (ENSCATG00000029505)	USP39 (ENSCATG00000024635)	C2orf68 (ENSCATG00000034407)	TMEM150A (ENSCATG00000037683) ##22	RNF181 (ENSCATG00000033596)	VAMP8 (ENSCATG00000029537)	GGCX (ENSCATG00000035800)	MAT2A (ENSCATG00000004424)	ENSCATG00000039329	ENSCATG00000037270	CAPG (ENSCATG00000035643)	ELMOD3 (ENSCATG00000037573)	RETSAT (ENSCATG00000040068)	ENSCATG00000036711	TGOLN2 (ENSCATG00000035819)	ENSCATG00000024477	ENSCATG00000033790	TCF7L1 (ENSCATG00000039504)	ENSCATG00000029438
Olive baboon	MODERN SPECIES	5	ENSPANG00000039728	ENSPANG00000047391	CHMP3 (ENSPANG00000021184)	KDM3A (ENSPANG00000012322)	REEP1 (ENSPANG00000009005)	MRPL35 (ENSPANG00000025906)	IMMT (ENSPANG00000012838)	PTCD3 (ENSPANG00000009006)	POLR1A (ENSPANG00000025908)	ST3GAL5 (ENSPANG00000022914)	ATOH8 (ENSPANG00000048662)	GNLY (ENSPANG00000022008)	SFTPB (ENSPANG00000011084)	C2orf68 (ENSPANG00000011060)	USP39 (ENSPANG00000017132)	TMEM150A (ENSPANG00000006521) ##22	RNF181 (ENSPANG00000024386)	VAMP5 (ENSPANG00000016261)	VAMP8 (ENSPANG00000017285)	GGCX (ENSPANG00000020859)	MAT2A (ENSPANG00000024065)	ENSPANG00000004074	CAPG (ENSPANG00000000842)	ELMOD3 (ENSPANG00000024547)	RETSAT (ENSPANG00000009008)	TGOLN2 (ENSPANG00000005831)	ENSPANG00000050077	TCF7L1 (ENSPANG00000018548)	KCMF1 (ENSPANG00000007610)	TMSB10 (ENSPANG00000045803)	TRABD2A (ENSPANG00000026230)
Rhinopithecus	ANCESTRAL SPECIES	280				ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901.t	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00910000147328
Golden snub-nosed monkey	MODERN SPECIES	2316			KDM3A (ENSRROG00000041429)	REEP1 (ENSRROG00000034941)	MRPL35 (ENSRROG00000045417)	IMMT (ENSRROG00000023135)	PTCD3 (ENSRROG00000042210)	POLR1A (ENSRROG00000031473)	ST3GAL5 (ENSRROG00000031090)	ATOH8 (ENSRROG00000031621)	GNLY (ENSRROG00000036075)	SFTPB (ENSRROG00000027383)	ENSRROG00000025648	USP39 (ENSRROG00000039568)	ENSRROG00000029427	TMEM150A (ENSRROG00000036503) ##22	RNF181 (ENSRROG00000032844)	VAMP5 (ENSRROG00000031654)	VAMP8 (ENSRROG00000038818)	GGCX (ENSRROG00000037659)	MAT2A (ENSRROG00000039359)
Black snub-nosed monkey	MODERN SPECIES	1845				REEP1 (ENSRBIG00000044318)	ENSRBIG00000043270	IMMT (ENSRBIG00000033551)	PTCD3 (ENSRBIG00000034809)	POLR1A (ENSRBIG00000028335)	ST3GAL5 (ENSRBIG00000044506)	ATOH8 (ENSRBIG00000021163)	GNLY (ENSRBIG00000042514)	SFTPB (ENSRBIG00000039671)	ENSRBIG00000005054	USP39 (ENSRBIG00000030938)	ENSRBIG00000028092	TMEM150A (ENSRBIG00000031271) ##22	RNF181 (ENSRBIG00000037300)	VAMP5 (ENSRBIG00000040671)	VAMP8 (ENSRBIG00000032593)	GGCX (ENSRBIG00000027641)	MAT2A (ENSRBIG00000040691)	ENSRBIG00000030434	ENSRBIG00000042213
Hominoidea	ANCESTRAL SPECIES	18	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00910000146589	ENSGT00910000147328	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00910000147298	ENSGT00910000147626
Hominidae	ANCESTRAL SPECIES	19	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00910000147298	ENSGT00910000147626	ENSGT00390000012818.o.a.a.b	ENSGT00940000157038
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	18	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371.e	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00910000147298	ENSGT00910000147626	ENSGT00390000012818.o.a.a.b	ENSGT00940000157038
Gorilla	MODERN SPECIES	14	CD8A (ENSGGOG00000004023)	RMND5A (ENSGGOG00000038019)	RNF103 (ENSGGOG00000040477)	ENSGGOG00000036311	KDM3A (ENSGGOG00000006940)	REEP1 (ENSGGOG00000039874)	MRPL35 (ENSGGOG00000026769)	IMMT (ENSGGOG00000005264)	PTCD3 (ENSGGOG00000001793)	POLR1A (ENSGGOG00000001788)	ST3GAL5 (ENSGGOG00000024421)	ENSGGOG00000005461	SFTPB (ENSGGOG00000039514)	USP39 (ENSGGOG00000001377)	C2orf68 (ENSGGOG00000042756)	TMEM150A (ENSGGOG00000004955) ##22	RNF181 (ENSGGOG00000004953)	VAMP5 (ENSGGOG00000004951)	ENSGGOG00000004945	GGCX (ENSGGOG00000004940)	MAT2A (ENSGGOG00000004936)	ENSGGOG00000001052	CAPG (ENSGGOG00000011604)	ELMOD3 (ENSGGOG00000026185)	RETSAT (ENSGGOG00000008852)	ENSGGOG00000043575	TGOLN2 (ENSGGOG00000000713)	ENSGGOG00000036619	ENSGGOG00000038515	ENSGGOG00000039072	TCF7L1 (ENSGGOG00000008549)
Homo/Pan group	ANCESTRAL SPECIES	14	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371.e	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00910000147298	ENSGT00910000147626	ENSGT00390000012818.o.a.a.b	ENSGT00940000157038
Human	MODERN SPECIES	11	RNF103 (ENSG00000239305)	RNF103-CHMP3 (ENSG00000249884)	CHMP3 (ENSG00000115561)	KDM3A (ENSG00000115548)	REEP1 (ENSG00000068615)	MRPL35 (ENSG00000132313)	IMMT (ENSG00000132305)	PTCD3 (ENSG00000132300)	POLR1A (ENSG00000068654)	ST3GAL5 (ENSG00000115525)	ATOH8 (ENSG00000168874)	GNLY (ENSG00000115523)	SFTPB (ENSG00000168878)	C2orf68 (ENSG00000168887)	USP39 (ENSG00000168883)	TMEM150A (ENSG00000168890) ##22	RNF181 (ENSG00000168894)	VAMP5 (ENSG00000168899)	VAMP8 (ENSG00000118640)	GGCX (ENSG00000115486)	MAT2A (ENSG00000168906)	SH2D6 (ENSG00000152292)	CAPG (ENSG00000042493)	ELMOD3 (ENSG00000115459)	RETSAT (ENSG00000042445)	TGOLN2 (ENSG00000152291)	TCF7L1 (ENSG00000152284)	KCMF1 (ENSG00000176407)	TMSB10 (ENSG00000034510)	TRABD2A (ENSG00000186854)	DNAH6 (ENSG00000115423)
Pan	ANCESTRAL SPECIES	17	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371.e	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.s	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00910000147298	ENSGT00910000147626	ENSGT00390000012818.o.a.a.b	ENSGT00940000157038
Chimpanzee	MODERN SPECIES	14	RMND5A (ENSPTRG00000050213)	RNF103 (ENSPTRG00000045971)	CHMP3 (ENSPTRG00000012156)	KDM3A (ENSPTRG00000012155)	REEP1 (ENSPTRG00000012153)	MRPL35 (ENSPTRG00000012152)	IMMT (ENSPTRG00000012150)	PTCD3 (ENSPTRG00000012149)	POLR1A (ENSPTRG00000012147)	ST3GAL5 (ENSPTRG00000012146)	ATOH8 (ENSPTRG00000045046)	GNLY (ENSPTRG00000012143)	SFTPB (ENSPTRG00000044361)	USP39 (ENSPTRG00000012141)	C2AH2orf68 (ENSPTRG00000045018)	TMEM150A (ENSPTRG00000012139) ##22	RNF181 (ENSPTRG00000012138)	VAMP5 (ENSPTRG00000012137)	VAMP8 (ENSPTRG00000012136)	GGCX (ENSPTRG00000012135)	MAT2A (ENSPTRG00000012134)	SH2D6 (ENSPTRG00000012133)	CAPG (ENSPTRG00000012132)	ELMOD3 (ENSPTRG00000012131)	RETSAT (ENSPTRG00000012130)	ENSPTRG00000051234	ENSPTRG00000048519	ENSPTRG00000044302	TGOLN2 (ENSPTRG00000012129)	ENSPTRG00000050133	ENSPTRG00000044898
Bonobo	MODERN SPECIES	14	RMND5A (ENSPPAG00000030949)	RNF103 (ENSPPAG00000029867)	CHMP3 (ENSPPAG00000027547)	ENSPPAG00000036721	REEP1 (ENSPPAG00000040193)	MRPL35 (ENSPPAG00000042773)	IMMT (ENSPPAG00000031689)	PTCD3 (ENSPPAG00000027578)	POLR1A (ENSPPAG00000042450)	ST3GAL5 (ENSPPAG00000030557)	ATOH8 (ENSPPAG00000038955)	ENSPPAG00000029229	SFTPB (ENSPPAG00000028425)	USP39 (ENSPPAG00000028703)	C2orf68 (ENSPPAG00000027113)	TMEM150A (ENSPPAG00000029677) ##22	RNF181 (ENSPPAG00000031062)	VAMP5 (ENSPPAG00000031044)	VAMP8 (ENSPPAG00000031084)	GGCX (ENSPPAG00000031307)	MAT2A (ENSPPAG00000041128)	ENSPPAG00000037603	CAPG (ENSPPAG00000035666)	ELMOD3 (ENSPPAG00000027146)	RETSAT (ENSPPAG00000031643)	ENSPPAG00000032707	ENSPPAG00000043071	ENSPPAG00000041446	ENSPPAG00000036633	ENSPPAG00000035809	TCF7L1 (ENSPPAG00000030803)
Orangutan	MODERN SPECIES	14	RMND5A (ENSPPYG00000012209)	RNF103 (ENSPPYG00000012210)	CHMP3 (ENSPPYG00000012211)	KDM3A (ENSPPYG00000012212)	REEP1 (ENSPPYG00000012213)	MRPL35 (ENSPPYG00000032949)	IMMT (ENSPPYG00000039510)	PTCD3 (ENSPPYG00000012216)	POLR1A (ENSPPYG00000012217)	ST3GAL5 (ENSPPYG00000033548)	ATOH8 (ENSPPYG00000012219)	ENSPPYG00000012220	SFTPB (ENSPPYG00000012221)	USP39 (ENSPPYG00000012222)	C2orf68 (ENSPPYG00000035994)	TMEM150A (ENSPPYG00000034938) ##22	RNF181 (ENSPPYG00000012225)	VAMP5 (ENSPPYG00000036939)	VAMP8 (ENSPPYG00000012227)	GGCX (ENSPPYG00000012228)	MAT2A (ENSPPYG00000012229)	SH2D6 (ENSPPYG00000012230)	CAPG (ENSPPYG00000012231)	ELMOD3 (ENSPPYG00000012232)	RETSAT (ENSPPYG00000012233)	TGOLN2 (ENSPPYG00000012712)	TCF7L1 (ENSPPYG00000012234)	KCMF1 (ENSPPYG00000012235)	TMSB10 (ENSPPYG00000030623)	TRABD2A (ENSPPYG00000012239)	DNAH6 (ENSPPYG00000012240)
Gibbon	MODERN SPECIES	4	CD8A (ENSNLEG00000002889)	RMND5A (ENSNLEG00000028965)	ENSNLEG00000002827	CHMP3 (ENSNLEG00000034943)	ENSNLEG00000002800	REEP1 (ENSNLEG00000002772)	MRPL35 (ENSNLEG00000028560)	IMMT (ENSNLEG00000002600)	PTCD3 (ENSNLEG00000002493)	POLR1A (ENSNLEG00000002264)	ST3GAL5 (ENSNLEG00000002192)	ENSNLEG00000027010	SFTPB (ENSNLEG00000002112)	USP39 (ENSNLEG00000002008)	C2orf68 (ENSNLEG00000027161)	TMEM150A (ENSNLEG00000032914) ##22	RNF181 (ENSNLEG00000030284)	VAMP5 (ENSNLEG00000030799)	ENSNLEG00000002000	GGCX (ENSNLEG00000001826)	MAT2A (ENSNLEG00000001767)	ENSNLEG00000001807	ENSNLEG00000028749	CAPG (ENSNLEG00000001666)	ENSNLEG00000001571	RETSAT (ENSNLEG00000001497)	ENSNLEG00000001496	TGOLN2 (ENSNLEG00000001482)	ENSNLEG00000035166	ENSNLEG00000032991	ENSNLEG00000028501
Platyrrhini	ANCESTRAL SPECIES	13	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.f	ENSGT00940000160135.a	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992.t	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00910000147328	ENSGT00910000146589	ENSGT00940000159305.g	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00390000017613.q	ENSGT00940000157038	ENSGT00510000047171
Cebidae	ANCESTRAL SPECIES	15	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.f	ENSGT00940000160135.a	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992.t	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552.e.a	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00910000147328	ENSGT00910000146589	ENSGT00940000159305.g	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007
Cebidae_a	ANCESTRAL SPECIES	91	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C.f	ENSGT00940000160135.a	ENSGT00940000159532	ENSGT00390000007547.g.a	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00390000002975	ENSGT00940000161711	ENSGT00390000007992.t	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552.e.a	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00910000146589	ENSGT00940000159305.g	ENSGT00390000009488	ENSGT00390000017613.r	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Bolivian squirrel monkey	MODERN SPECIES	196													SFTPB (ENSSBOG00000033848)	USP39 (ENSSBOG00000031347)	C2orf68 (ENSSBOG00000032799)	TMEM150A (ENSSBOG00000030498) ##22	RNF181 (ENSSBOG00000025972)	VAMP5 (ENSSBOG00000023652)	VAMP8 (ENSSBOG00000025099)	ENSSBOG00000024413	ENSSBOG00000020245	ENSSBOG00000004955	CAPG (ENSSBOG00000026620)	ELMOD3 (ENSSBOG00000026015)	RETSAT (ENSSBOG00000027110)	ENSSBOG00000029932	TCF7L1 (ENSSBOG00000024977)	KCMF1 (ENSSBOG00000028450)	TMSB10 (ENSSBOG00000024439)	TRABD2A (ENSSBOG00000021372)	ENSSBOG00000026272
Capuchin	MODERN SPECIES	651											ATOH8 (ENSCCAG00000023833)	GNLY (ENSCCAG00000030545)	SFTPB (ENSCCAG00000027112)	USP39 (ENSCCAG00000033512)	ENSCCAG00000025404	TMEM150A (ENSCCAG00000019691) ##22	ENSCCAG00000025694	VAMP5 (ENSCCAG00000036984)	VAMP8 (ENSCCAG00000027515)	GGCX (ENSCCAG00000029602)	MAT2A (ENSCCAG00000020027)	ENSCCAG00000011821	ENSCCAG00000021850	ENSCCAG00000028615	ENSCCAG00000029318	ELMOD3 (ENSCCAG00000019649)	RETSAT (ENSCCAG00000033378)	TGOLN2 (ENSCCAG00000026086)	ENSCCAG00000021530	SNRPC (ENSCCAG00000028293)	TCF7L1 (ENSCCAG00000015290)
Marmoset	MODERN SPECIES	5	RNF103 (ENSCJAG00000037995)	CHMP3 (ENSCJAG00000019406)	KDM3A (ENSCJAG00000019414)	REEP1 (ENSCJAG00000038576)	ENSCJAG00000019467	IMMT (ENSCJAG00000019480)	PTCD3 (ENSCJAG00000019523)	POLR1A (ENSCJAG00000019547)	ST3GAL5 (ENSCJAG00000019564)	ATOH8 (ENSCJAG00000019571)	GNLY (ENSCJAG00000065652)	ENSCJAG00000071875	SFTPB (ENSCJAG00000019581)	USP39 (ENSCJAG00000019594)	C2orf68 (ENSCJAG00000019632)	TMEM150A (ENSCJAG00000019638) ##22	ENSCJAG00000019647	VAMP5 (ENSCJAG00000019651)	VAMP8 (ENSCJAG00000046213)	GGCX (ENSCJAG00000019657)	MAT2A (ENSCJAG00000019681)	SH2D6 (ENSCJAG00000019695)	CAPG (ENSCJAG00000041726)	ELMOD3 (ENSCJAG00000019718)	RETSAT (ENSCJAG00000019726)	TCF7L1 (ENSCJAG00000039504)	KCMF1 (ENSCJAG00000019735)	ENSCJAG00000072028	ENSCJAG00000082255	TMSB10 (ENSCJAG00000086618)	TRABD2A (ENSCJAG00000019738)
Mas night monkey	MODERN SPECIES	633	RNF103 (ENSANAG00000020832)	ENSANAG00000033557	KDM3A (ENSANAG00000023152)	REEP1 (ENSANAG00000034595)	MRPL35 (ENSANAG00000030616)	IMMT (ENSANAG00000020307)	ENSANAG00000015996	PTCD3 (ENSANAG00000032500)	POLR1A (ENSANAG00000033927)	ST3GAL5 (ENSANAG00000027759)	ATOH8 (ENSANAG00000037969)	ENSANAG00000036833	SFTPB (ENSANAG00000028481)	ENSANAG00000037337	C2orf68 (ENSANAG00000011782)	TMEM150A (ENSANAG00000022848) ##22	ENSANAG00000035031	VAMP5 (ENSANAG00000027585)	VAMP8 (ENSANAG00000022750)	GGCX (ENSANAG00000024216)	ENSANAG00000029217
Tarsier	MODERN SPECIES	1905													SFTPB (ENSTSYG00000031502)	USP39 (ENSTSYG00000000260)	ENSTSYG00000027566	TMEM150A (ENSTSYG00000034230) ##22	RNF181 (ENSTSYG00000007140)	VAMP5 (ENSTSYG00000001454)	VAMP8 (ENSTSYG00000009911)	GGCX (ENSTSYG00000008648)	ENSTSYG00000036288	ENSTSYG00000033439
Euarchontoglires_A	ANCESTRAL SPECIES	14	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Tree shrew	MODERN SPECIES	3596													ENSTBEG00000004319	USP39 (ENSTBEG00000003652)	ENSTBEG00000002617	TMEM150A (ENSTBEG00000001709) ##22	VAMP5 (ENSTBEG00000001360)	ENSTBEG00000001179	GGCX (ENSTBEG00000009183)	MAT2A (ENSTBEG00000008919)
Glires	ANCESTRAL SPECIES	13	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Rodentia	ANCESTRAL SPECIES	15	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Rodentia_A	ANCESTRAL SPECIES	14	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171.n	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Sciuridae	ANCESTRAL SPECIES	53	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00390000004352	ENSGT00940000163478
Marmotini	ANCESTRAL SPECIES	86	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a	ENSGT00390000004352	ENSGT00940000163478
Marmotini_b	ANCESTRAL SPECIES	128	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000154129.m.r.b	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00940000153165.a.a.c.a.i.b.b.b.a.a	ENSGT00390000004352	ENSGT00940000163478
Arctic ground squirrel	MODERN SPECIES	609											ENSUPAG00010000360	SFTPB (ENSUPAG00010000319)	USP39 (ENSUPAG00010000286)	ENSUPAG00010000260	RNF181 (ENSUPAG00010000242)	TMEM150A (ENSUPAG00010000226) ##22	ENSUPAG00010000192	VAMP8 (ENSUPAG00010000178)	GGCX (ENSUPAG00010000144)	MAT2A (ENSUPAG00010000075)	SH2D6 (ENSUPAG00010018214)	CAPG (ENSUPAG00010018187)	ELMOD3 (ENSUPAG00010018158)	RETSAT (ENSUPAG00010018105)	ENSUPAG00010018102	TCF7L1 (ENSUPAG00010018088)	ENSUPAG00010018060	RPIA (ENSUPAG00010018051)	IGKC (ENSUPAG00010018047)
Squirrel	MODERN SPECIES	312	RNF103 (ENSSTOG00000021035)	CHMP3 (ENSSTOG00000025099)	KDM3A (ENSSTOG00000002607)	REEP1 (ENSSTOG00000025141)	MRPL35 (ENSSTOG00000030233)	IMMT (ENSSTOG00000012624)	PTCD3 (ENSSTOG00000012611)	POLR1A (ENSSTOG00000012580)	ENSSTOG00000012609	ST3GAL5 (ENSSTOG00000024816)	ATOH8 (ENSSTOG00000006538)	ENSSTOG00000033478	SFTPB (ENSSTOG00000026197)	USP39 (ENSSTOG00000015986)	C2orf68 (ENSSTOG00000032886)	TMEM150A (ENSSTOG00000023355) ##22	RNF181 (ENSSTOG00000005973)	VAMP5 (ENSSTOG00000005966)	VAMP8 (ENSSTOG00000005962)	GGCX (ENSSTOG00000010797)	MAT2A (ENSSTOG00000010796)	ENSSTOG00000010788	CAPG (ENSSTOG00000009431)	ELMOD3 (ENSSTOG00000009420)	RETSAT (ENSSTOG00000026131)	ENSSTOG00000020177	TCF7L1 (ENSSTOG00000021988)	ENSSTOG00000031036	ENSSTOG00000034297	RPIA (ENSSTOG00000023312)
Alpin marmot	MODERN SPECIES	118	CD8A (ENSMMMG00000009411)	RMND5A (ENSMMMG00000009392)	ENSMMMG00000009382	RNF103 (ENSMMMG00000009373)	CHMP3 (ENSMMMG00000009359)	KDM3A (ENSMMMG00000009242)	REEP1 (ENSMMMG00000009193)	MRPL35 (ENSMMMG00000009181)	IMMT (ENSMMMG00000009011)	PTCD3 (ENSMMMG00000008977)	POLR1A (ENSMMMG00000008920)	ST3GAL5 (ENSMMMG00000008911)	SFTPB (ENSMMMG00000008881)	ENSMMMG00000008853	USP39 (ENSMMMG00000008203)	TMEM150A (ENSMMMG00000008189) ##22	RNF181 (ENSMMMG00000008179)	VAMP5 (ENSMMMG00000008168)	VAMP8 (ENSMMMG00000008162)	GGCX (ENSMMMG00000008142)	MAT2A (ENSMMMG00000007871)	ENSMMMG00000007857	CAPG (ENSMMMG00000007822)	ENSMMMG00000007785	RETSAT (ENSMMMG00000007689)	ENSMMMG00000007682	TCF7L1 (ENSMMMG00000007633)	ENSMMMG00000007627	ENSMMMG00000007617	ENSMMMG00000007572	RPIA (ENSMMMG00000007477)
Eurasian red squirrel	MODERN SPECIES	5	CD8A (ENSSVLG00005016029)	RMND5A (ENSSVLG00005016210)	RNF103 (ENSSVLG00005016236)	CHMP3 (ENSSVLG00005016280)	KDM3A (ENSSVLG00005016348)	REEP1 (ENSSVLG00005016418)	MRPL35 (ENSSVLG00005016713)	IMMT (ENSSVLG00005016785)	PTCD3 (ENSSVLG00005016912)	POLR1A (ENSSVLG00005015696)	ST3GAL5 (ENSSVLG00005015795)	ATOH8 (ENSSVLG00005015922)	SFTPB (ENSSVLG00005015980)	USP39 (ENSSVLG00005016257)	ENSSVLG00005016431	TMEM150A (ENSSVLG00005016477) ##22	RNF181 (ENSSVLG00005016555)	VAMP5 (ENSSVLG00005016585)	VAMP8 (ENSSVLG00005016627)	GGCX (ENSSVLG00005016698)	ENSSVLG00005016868	MAT2A (ENSSVLG00005016926)	SH2D6 (ENSSVLG00005016979)	ENSSVLG00005017177	CAPG (ENSSVLG00005017210)	ELMOD3 (ENSSVLG00005017414)	RETSAT (ENSSVLG00005017559)	ENSSVLG00005017693	TCF7L1 (ENSSVLG00005017741)	ENSSVLG00005017786	ENSSVLG00005017863
Hystricomorpha	ANCESTRAL SPECIES	8	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171.n	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Hystricomorpha_a	ANCESTRAL SPECIES	35	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171.n	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Guinea pig	MODERN SPECIES	37	CD8A (ENSCPOG00000033458)	RMND5A (ENSCPOG00000038199)	RNF103 (ENSCPOG00000001724)	CHMP3 (ENSCPOG00000001723)	KDM3A (ENSCPOG00000023055)	REEP1 (ENSCPOG00000012389)	MRPL35 (ENSCPOG00000012387)	IMMT (ENSCPOG00000012379)	PTCD3 (ENSCPOG00000012371)	POLR1A (ENSCPOG00000012350)	ST3GAL5 (ENSCPOG00000000993)	ATOH8 (ENSCPOG00000006364)	SFTPB (ENSCPOG00000035291)	USP39 (ENSCPOG00000009315)	C2orf68 (ENSCPOG00000009311)	TMEM150A (ENSCPOG00000025516) ##22	RNF181 (ENSCPOG00000001938)	VAMP5 (ENSCPOG00000021802)	VAMP8 (ENSCPOG00000001409)	GGCX (ENSCPOG00000001534)	MAT2A (ENSCPOG00000001533)	ENSCPOG00000012229	CAPG (ENSCPOG00000007978)	ELMOD3 (ENSCPOG00000007973)	RETSAT (ENSCPOG00000022640)	ENSCPOG00000037555	TCF7L1 (ENSCPOG00000014492)	KCMF1 (ENSCPOG00000023050)	DNAH6 (ENSCPOG00000015041)	SUCLG1 (ENSCPOG00000003017)	CTNNA2 (ENSCPOG00000023564)
Hystricomorpha_b	ANCESTRAL SPECIES	33	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00940000157038	ENSGT00510000047171.n	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351	ENSGT00940000161705
Long-tailed chinchilla	MODERN SPECIES	131	CD8A (ENSCLAG00000005524)	RMND5A (ENSCLAG00000006343)	RNF103 (ENSCLAG00000008827)	CHMP3 (ENSCLAG00000009289)	KDM3A (ENSCLAG00000011990)	REEP1 (ENSCLAG00000012499)	MRPL35 (ENSCLAG00000004489)	IMMT (ENSCLAG00000005278)	PTCD3 (ENSCLAG00000007992)	POLR1A (ENSCLAG00000005187)	ST3GAL5 (ENSCLAG00000006950)	ATOH8 (ENSCLAG00000006142)	SFTPB (ENSCLAG00000006471)	USP39 (ENSCLAG00000006866)	C2orf68 (ENSCLAG00000009438)	TMEM150A (ENSCLAG00000005500) ##22	RNF181 (ENSCLAG00000006082)	VAMP5 (ENSCLAG00000009915)	VAMP8 (ENSCLAG00000008880)	GGCX (ENSCLAG00000005838)	MAT2A (ENSCLAG00000007205)	ENSCLAG00000006141	CAPG (ENSCLAG00000004481)	ELMOD3 (ENSCLAG00000009003)	RETSAT (ENSCLAG00000008939)	TCF7L1 (ENSCLAG00000007414)	KCMF1 (ENSCLAG00000009986)	TMSB10 (ENSCLAG00000010365)	DNAH6 (ENSCLAG00000006035)	SUCLG1 (ENSCLAG00000008580)	ENSCLAG00000009325
Degu	MODERN SPECIES	203	ENSODEG00000018853	RNF103 (ENSODEG00000003000)	ENSODEG00000003034	KDM3A (ENSODEG00000003061)	REEP1 (ENSODEG00000003133)	MRPL35 (ENSODEG00000003180)	IMMT (ENSODEG00000003274)	PTCD3 (ENSODEG00000003461)	POLR1A (ENSODEG00000003542)	ENSODEG00000018941	ST3GAL5 (ENSODEG00000003647)	ATOH8 (ENSODEG00000003670)	SFTPB (ENSODEG00000003695)	USP39 (ENSODEG00000003717)	C2orf68 (ENSODEG00000003734)	TMEM150A (ENSODEG00000003753) ##22	RNF181 (ENSODEG00000003046)	VAMP5 (ENSODEG00000003093)	VAMP8 (ENSODEG00000003107)	GGCX (ENSODEG00000003141)	ENSODEG00000003186	SH2D6 (ENSODEG00000003239)	ENSODEG00000018929	CAPG (ENSODEG00000003321)	ELMOD3 (ENSODEG00000003393)	RETSAT (ENSODEG00000003469)	TCF7L1 (ENSODEG00000003559)	ENSODEG00000003586	ENSODEG00000003596	DNAH6 (ENSODEG00000003756)	SUCLG1 (ENSODEG00000002195)
Naked mole-rat female	MODERN SPECIES	23	KDM3A (ENSHGLG00000008133)	ENSHGLG00000009499	REEP1 (ENSHGLG00000033995)	MRPL35 (ENSHGLG00000042289)	ENSHGLG00000049882	IMMT (ENSHGLG00000004647)	PTCD3 (ENSHGLG00000007937)	ENSHGLG00000006334	ENSHGLG00000050264	ST3GAL5 (ENSHGLG00000015817)	ATOH8 (ENSHGLG00000013394)	ENSHGLG00000033431	SFTPB (ENSHGLG00000016430)	USP39 (ENSHGLG00000015846)	C2orf68 (ENSHGLG00000036696)	TMEM150A (ENSHGLG00000010994) ##22	RNF181 (ENSHGLG00000045564)	ENSHGLG00000012613	VAMP8 (ENSHGLG00000012997)	GGCX (ENSHGLG00000013929)	MAT2A (ENSHGLG00000018376)	SH2D6 (ENSHGLG00000016223)	CAPG (ENSHGLG00000004995)	ENSHGLG00000043435	ENSHGLG00000005816	RETSAT (ENSHGLG00000009788)	ENSHGLG00000007230	TCF7L1 (ENSHGLG00000044140)	ENSHGLG00000049290	ENSHGLG00000036565	ENSHGLG00000039609
Rodentia_B	ANCESTRAL SPECIES	14	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Kangaroo rat	MODERN SPECIES	528								ENSDORG00000001073	Ptcd3 (ENSDORG00000008305)	Polr1a (ENSDORG00000008298)	St3gal5 (ENSDORG00000008296)	Atoh8 (ENSDORG00000028892)	Sftpb (ENSDORG00000010751)	Usp39 (ENSDORG00000010746)	0610030E20Rik (ENSDORG00000030143)	Tmem150a (ENSDORG00000010742) ##22	ENSDORG00000010740	Vamp5 (ENSDORG00000027327)	Vamp8 (ENSDORG00000010738)	Ggcx (ENSDORG00000006726)	Mat2a (ENSDORG00000011312)	Sh2d6 (ENSDORG00000013882)	Capg (ENSDORG00000009722)	Elmod3 (ENSDORG00000009721)	Retsat (ENSDORG00000009720)	Tcf7l1 (ENSDORG00000013753)	Kcmf1 (ENSDORG00000029229)	Tmsb10b (ENSDORG00000025129)	Dnah6 (ENSDORG00000000400)	Suclg1 (ENSDORG00000010991)
Myomorpha	ANCESTRAL SPECIES	37	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Muroidea	ANCESTRAL SPECIES	38	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909.g	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909.g	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Chinese hamster chok1gshd	MODERN SPECIES	242	Rnf103 (ENSCGRG00001021900)	Chmp3 (ENSCGRG00001021521)	Kdm3a (ENSCGRG00001020421)	Reep1 (ENSCGRG00001018917)	Mrpl35 (ENSCGRG00001016701)	Immt (ENSCGRG00001013917)	Ptcd3 (ENSCGRG00001010361)	Polr1a (ENSCGRG00001006651)	ENSCGRG00001015637	St3gal5 (ENSCGRG00001002527)	Atoh8 (ENSCGRG00001000824)	Sftpb (ENSCGRG00001020533)	Usp39 (ENSCGRG00001019807)	0610030E20Rik (ENSCGRG00001019313)	Rnf181 (ENSCGRG00001017863)	Tmem150a (ENSCGRG00001016577) ##22	Vamp5 (ENSCGRG00001015261)	Vamp8 (ENSCGRG00001014727)	Ggcx (ENSCGRG00001012860)	Mat2a (ENSCGRG00001010053)	Sh2d6 (ENSCGRG00001007691)	Capg (ENSCGRG00001001836)	Elmod3 (ENSCGRG00001000477)	Retsat (ENSCGRG00001023894)	ENSCGRG00001022789	Tcf7l1 (ENSCGRG00001021396)	Kcmf1 (ENSCGRG00001018737)	Tmsb10b (ENSCGRG00001017927)	ENSCGRG00001017576	Dnah6 (ENSCGRG00001001087)	Suclg1 (ENSCGRG00001007965)
Golden Hamster	MODERN SPECIES	675	Cd8a (ENSMAUG00000000153)	Rmnd5a (ENSMAUG00000000904)	Rnf103 (ENSMAUG00000008124)	Chmp3 (ENSMAUG00000009081)	Kdm3a (ENSMAUG00000006230)	Reep1 (ENSMAUG00000013117)	Mrpl35 (ENSMAUG00000009361)	Immt (ENSMAUG00000011453)	Ptcd3 (ENSMAUG00000000145)	Polr1a (ENSMAUG00000008497)	St3gal5 (ENSMAUG00000012326)	Atoh8 (ENSMAUG00000008236)	Sftpb (ENSMAUG00000008956)	Usp39 (ENSMAUG00000009400)	0610030E20Rik (ENSMAUG00000011957)	Tmem150a (ENSMAUG00000012394) ##22	ENSMAUG00000015068	Vamp5 (ENSMAUG00000010363)	Vamp8 (ENSMAUG00000018469)	Ggcx (ENSMAUG00000014325)	Mat2a (ENSMAUG00000010463)	Sh2d6 (ENSMAUG00000000137)
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909.g	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Prairie vole	MODERN SPECIES	83	ENSMOCG00000014141	Rmnd5a (ENSMOCG00000005704)	Rnf103 (ENSMOCG00000013221)	Chmp3 (ENSMOCG00000022847)	Kdm3a (ENSMOCG00000011851)	Reep1 (ENSMOCG00000013750)	Mrpl35 (ENSMOCG00000008652)	Immt (ENSMOCG00000000827)	Ptcd3 (ENSMOCG00000019181)	Polr1a (ENSMOCG00000000122)	St3gal5 (ENSMOCG00000005961)	Atoh8 (ENSMOCG00000019812)	Sftpb (ENSMOCG00000003084)	Usp39 (ENSMOCG00000014162)	0610030E20Rik (ENSMOCG00000022948)	Tmem150a (ENSMOCG00000012440) ##22	ENSMOCG00000020563	Vamp5 (ENSMOCG00000014948)	Vamp8 (ENSMOCG00000004037)	Ggcx (ENSMOCG00000017281)	ENSMOCG00000011611	Sh2d6 (ENSMOCG00000015508)	Capg (ENSMOCG00000005806)	Elmod3 (ENSMOCG00000015870)	ENSMOCG00000002524	ENSMOCG00000000675	Retsat (ENSMOCG00000021447)	ENSMOCG00000000091	Tcf7l1 (ENSMOCG00000012953)	Kcmf1 (ENSMOCG00000003279)	ENSMOCG00000012602
Northern American deer mouse	MODERN SPECIES	16	Rnf103 (ENSPEMG00000021413)	ENSPEMG00000026065	Chmp3 (ENSPEMG00000020892)	Kdm3a (ENSPEMG00000020813)	Reep1 (ENSPEMG00000021271)	Mrpl35 (ENSPEMG00000021175)	Immt (ENSPEMG00000009199)	Ptcd3 (ENSPEMG00000024106)	Polr1a (ENSPEMG00000022224)	ENSPEMG00000023889	St3gal5 (ENSPEMG00000022543)	Atoh8 (ENSPEMG00000014683)	Sftpb (ENSPEMG00000013792)	Usp39 (ENSPEMG00000030030)	0610030E20Rik (ENSPEMG00000025650)	Tmem150a (ENSPEMG00000018551) ##22	ENSPEMG00000010283	Vamp5 (ENSPEMG00000027040)	Vamp8 (ENSPEMG00000029313)	Ggcx (ENSPEMG00000013327)	Mat2a (ENSPEMG00000015257)	Sh2d6 (ENSPEMG00000016371)	Capg (ENSPEMG00000018215)	Elmod3 (ENSPEMG00000010510)	Retsat (ENSPEMG00000011191)	Tgoln1 (ENSPEMG00000007145)	Tcf7l1 (ENSPEMG00000004714)	Kcmf1 (ENSPEMG00000029405)	ENSPEMG00000026592	ENSPEMG00000030958	Dnah6 (ENSPEMG00000023939)
Murinae	ANCESTRAL SPECIES	4	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000165681	ENSGT00940000154761
Mus	ANCESTRAL SPECIES	12	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000165681	ENSGT00940000154761
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.g	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000165681	ENSGT00940000154761
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.g	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
Mouse	MODERN SPECIES	15	Cd8a (ENSMUSG00000053977)	Rmnd5a (ENSMUSG00000002222)	Rnf103 (ENSMUSG00000052656)	Chmp3 (ENSMUSG00000053119)	Kdm3a (ENSMUSG00000053470)	Reep1 (ENSMUSG00000052852)	Mrpl35 (ENSMUSG00000052962)	Immt (ENSMUSG00000052337)	Ptcd3 (ENSMUSG00000063884)	Polr1a (ENSMUSG00000049553)	St3gal5 (ENSMUSG00000056091)	Atoh8 (ENSMUSG00000037621)	Sftpb (ENSMUSG00000056370)	Usp39 (ENSMUSG00000056305)	0610030E20Rik (ENSMUSG00000058706)	Tmem150a (ENSMUSG00000055912) ##22	Rnf181 (ENSMUSG00000055850)	Vamp5 (ENSMUSG00000073002)	Vamp8 (ENSMUSG00000050732)	Ggcx (ENSMUSG00000053460)	Mat2a (ENSMUSG00000053907)	Sh2d6 (ENSMUSG00000052631)	Capg (ENSMUSG00000056737)	Elmod3 (ENSMUSG00000056698)	Retsat (ENSMUSG00000056666)	Tgoln1 (ENSMUSG00000056429)	Tcf7l1 (ENSMUSG00000055799)	Kcmf1 (ENSMUSG00000055239)	Tmsb10 (ENSMUSG00000079523)	Dnah6 (ENSMUSG00000052861)	Suclg1 (ENSMUSG00000052738)
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a.g	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000154761	ENSGT00940000156351
spretus	MODERN SPECIES	15	Cd8a (MGP_SPRETEiJ_G0029490)	Rmnd5a (MGP_SPRETEiJ_G0029491)	Rnf103 (MGP_SPRETEiJ_G0029492)	Chmp3 (MGP_SPRETEiJ_G0029493)	Kdm3a (MGP_SPRETEiJ_G0029494)	MGP_SPRETEiJ_G0029495	Mrpl35 (MGP_SPRETEiJ_G0029496)	Immt (MGP_SPRETEiJ_G0029497)	Ptcd3 (MGP_SPRETEiJ_G0029498)	Polr1a (MGP_SPRETEiJ_G0029499)	St3gal5 (MGP_SPRETEiJ_G0029500)	Atoh8 (MGP_SPRETEiJ_G0029501)	Sftpb (MGP_SPRETEiJ_G0029502)	Usp39 (MGP_SPRETEiJ_G0029503)	0610030E20Rik (MGP_SPRETEiJ_G0029504)	Tmem150a (MGP_SPRETEiJ_G0029505) ##22	Rnf181 (MGP_SPRETEiJ_G0029506)	Vamp5 (MGP_SPRETEiJ_G0029507)	Vamp8 (MGP_SPRETEiJ_G0029508)	Ggcx (MGP_SPRETEiJ_G0029509)	Mat2a (MGP_SPRETEiJ_G0029510)	MGP_SPRETEiJ_G0029511	Capg (MGP_SPRETEiJ_G0029512)	Elmod3 (MGP_SPRETEiJ_G0029513)	Retsat (MGP_SPRETEiJ_G0029514)	Tgoln1 (MGP_SPRETEiJ_G0029515)	Tcf7l1 (MGP_SPRETEiJ_G0029516)	Kcmf1 (MGP_SPRETEiJ_G0029517)	MGP_SPRETEiJ_G0029518	Dnah6 (MGP_SPRETEiJ_G0029519)	Suclg1 (MGP_SPRETEiJ_G0029520)
Steppe mouse	MODERN SPECIES	3287	Rmnd5a (ENSMSIG00000009681)	Rnf103 (ENSMSIG00000009642)	Chmp3 (ENSMSIG00000009624)	Kdm3a (ENSMSIG00000009485)	Reep1 (ENSMSIG00000009384)	Mrpl35 (ENSMSIG00000009352)	Immt (ENSMSIG00000008522)	Ptcd3 (ENSMSIG00000008420)	Polr1a (ENSMSIG00000008358)	ENSMSIG00000008349	St3gal5 (ENSMSIG00000008306)	Atoh8 (ENSMSIG00000008291)	Sftpb (ENSMSIG00000008238)	Usp39 (ENSMSIG00000008226)	0610030E20Rik (ENSMSIG00000008200)	Tmem150a (ENSMSIG00000008166) ##22	ENSMSIG00000008118	ENSMSIG00000008096	Vamp8 (ENSMSIG00000008076)	Ggcx (ENSMSIG00000007972)	Mat2a (ENSMSIG00000007887)	Sh2d6 (ENSMSIG00000007788)	Capg (ENSMSIG00000007704)	Elmod3 (ENSMSIG00000007675)	Retsat (ENSMSIG00000007552)	ENSMSIG00000007493	Tcf7l1 (ENSMSIG00000007365)	Kcmf1 (ENSMSIG00000007304)	Tmsb10b (ENSMSIG00000007285)	Dnah6 (ENSMSIG00000007091)	ENSMSIG00000007062
Ryukyu mouse	MODERN SPECIES	15	Cd8a (MGP_CAROLIEiJ_G0028485)	Rmnd5a (MGP_CAROLIEiJ_G0028486)	Rnf103 (MGP_CAROLIEiJ_G0028487)	Chmp3 (MGP_CAROLIEiJ_G0028488)	Kdm3a (MGP_CAROLIEiJ_G0028489)	MGP_CAROLIEiJ_G0028490	Mrpl35 (MGP_CAROLIEiJ_G0028491)	Immt (MGP_CAROLIEiJ_G0028492)	Ptcd3 (MGP_CAROLIEiJ_G0028493)	Polr1a (MGP_CAROLIEiJ_G0028494)	St3gal5 (MGP_CAROLIEiJ_G0028495)	Atoh8 (MGP_CAROLIEiJ_G0028496)	Sftpb (MGP_CAROLIEiJ_G0028497)	Usp39 (MGP_CAROLIEiJ_G0028498)	0610030E20Rik (MGP_CAROLIEiJ_G0028499)	Tmem150a (MGP_CAROLIEiJ_G0028500) ##22	MGP_CAROLIEiJ_G0028501	Vamp5 (MGP_CAROLIEiJ_G0028502)	Vamp8 (MGP_CAROLIEiJ_G0028503)	Ggcx (MGP_CAROLIEiJ_G0028504)	Mat2a (MGP_CAROLIEiJ_G0028505)	Sh2d6 (MGP_CAROLIEiJ_G0028506)	Capg (MGP_CAROLIEiJ_G0028507)	Elmod3 (MGP_CAROLIEiJ_G0028508)	Retsat (MGP_CAROLIEiJ_G0028509)	Tgoln1 (MGP_CAROLIEiJ_G0028510)	Tcf7l1 (MGP_CAROLIEiJ_G0028511)	Kcmf1 (MGP_CAROLIEiJ_G0028512)	Tmsb10 (MGP_CAROLIEiJ_G0028513)	Dnah6 (MGP_CAROLIEiJ_G0028514)	Suclg1 (MGP_CAROLIEiJ_G0028515)
Shrew mouse	MODERN SPECIES	11	MGP_PahariEiJ_G0022221	Rmnd5a (MGP_PahariEiJ_G0022222)	Rnf103 (MGP_PahariEiJ_G0022223)	Chmp3 (MGP_PahariEiJ_G0022224)	Kdm3a (MGP_PahariEiJ_G0022225)	MGP_PahariEiJ_G0022226	Mrpl35 (MGP_PahariEiJ_G0022227)	Immt (MGP_PahariEiJ_G0022228)	Ptcd3 (MGP_PahariEiJ_G0022229)	Polr1a (MGP_PahariEiJ_G0022230)	St3gal5 (MGP_PahariEiJ_G0022231)	Atoh8 (MGP_PahariEiJ_G0022232)	Sftpb (MGP_PahariEiJ_G0022233)	Usp39 (MGP_PahariEiJ_G0022234)	0610030E20Rik (MGP_PahariEiJ_G0022235)	Tmem150a (MGP_PahariEiJ_G0022236) ##22	Rnf181 (MGP_PahariEiJ_G0022237)	Vamp8 (MGP_PahariEiJ_G0022238)	Ggcx (MGP_PahariEiJ_G0022239)	Mat2a (MGP_PahariEiJ_G0022240)	Sh2d6 (MGP_PahariEiJ_G0022241)	Capg (MGP_PahariEiJ_G0022242)	Elmod3 (MGP_PahariEiJ_G0022243)	Retsat (MGP_PahariEiJ_G0022244)	MGP_PahariEiJ_G0022245	Tcf7l1 (MGP_PahariEiJ_G0022246)	Kcmf1 (MGP_PahariEiJ_G0022247)	Tmsb10 (MGP_PahariEiJ_G0022248)	Dnah6 (MGP_PahariEiJ_G0022249)	Suclg1 (MGP_PahariEiJ_G0022250)	Jkampl (MGP_PahariEiJ_G0022251)
Rat	MODERN SPECIES	14	Rmnd5a (ENSRNOG00000028422)	Rnf103 (ENSRNOG00000007272)	Chmp3 (ENSRNOG00000007356)	Kdm3a (ENSRNOG00000007814)	Reep1 (ENSRNOG00000008481)	Mrpl35 (ENSRNOG00000008546)	Immt (ENSRNOG00000009097)	Ptcd3 (ENSRNOG00000009484)	Polr1a (ENSRNOG00000009545)	St3gal5 (ENSRNOG00000010284)	ENSRNOG00000065207	Atoh8 (ENSRNOG00000010716)	Sftpb (ENSRNOG00000010761)	Usp39 (ENSRNOG00000010930)	LOC691113 (ENSRNOG00000011713)	Tmem150a (ENSRNOG00000061100) ##22	Rnf181 (ENSRNOG00000012035)	Vamp5 (ENSRNOG00000012659)	Vamp8 (ENSRNOG00000012748)	Ggcx (ENSRNOG00000012975)	Mat2a (ENSRNOG00000013520)	Sh2d6 (ENSRNOG00000013605)	Capg (ENSRNOG00000013668)	Elmod3 (ENSRNOG00000038102)	Retsat (ENSRNOG00000014090)	Tgoln2 (ENSRNOG00000014617)	Tcf7l1 (ENSRNOG00000014753)	Kcmf1 (ENSRNOG00000015097)	Tmsb10 (ENSRNOG00000064090)	Dnah6 (ENSRNOG00000015581)	Suclg1 (ENSRNOG00000005587)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1096										St3gal5 (ENSNGAG00000020246)	ENSNGAG00000017959	Atoh8 (ENSNGAG00000017424)	Sftpb (ENSNGAG00000020909)	Usp39 (ENSNGAG00000018760)	0610030E20Rik (ENSNGAG00000012174)	Tmem150a (ENSNGAG00000000493) ##22	ENSNGAG00000010364	Vamp5 (ENSNGAG00000022303)	ENSNGAG00000014911	Ggcx (ENSNGAG00000000695)	Mat2a (ENSNGAG00000014289)	Sh2d6 (ENSNGAG00000000856)	Capg (ENSNGAG00000019315)	Elmod3 (ENSNGAG00000017699)	Retsat (ENSNGAG00000007772)	Tcf7l1 (ENSNGAG00000020122)	ENSNGAG00000017279	Tmsb10b (ENSNGAG00000016585)	Dnah6 (ENSNGAG00000013760)	ENSNGAG00000013792	Suclg1 (ENSNGAG00000015283)
Lesser Egyptian jerboa	MODERN SPECIES	77	ENSJJAG00000016765	ENSJJAG00000017252	Rmnd5a (ENSJJAG00000023067)	ENSJJAG00000002281	Rnf103 (ENSJJAG00000013104)	ENSJJAG00000004517	ENSJJAG00000016934	Kdm3a (ENSJJAG00000022464)	Reep1 (ENSJJAG00000021695)	Immt (ENSJJAG00000015348)	ENSJJAG00000012431	Polr1a (ENSJJAG00000013113)	St3gal5 (ENSJJAG00000012802)	Atoh8 (ENSJJAG00000003684)	Sftpb (ENSJJAG00000020339)	Tmem150a (ENSJJAG00000015485) ##22	ENSJJAG00000012435	Vamp5 (ENSJJAG00000021713)	Vamp8 (ENSJJAG00000023575)	Ggcx (ENSJJAG00000013219)	Mat2a (ENSJJAG00000019942)	Sh2d6 (ENSJJAG00000011036)	Capg (ENSJJAG00000011988)	Elmod3 (ENSJJAG00000015903)	Retsat (ENSJJAG00000018206)	ENSJJAG00000022764	Tcf7l1 (ENSJJAG00000023485)	ENSJJAG00000010136	Kcmf1 (ENSJJAG00000020771)	ENSJJAG00000006387	ENSJJAG00000009987
Lagomorpha	ANCESTRAL SPECIES	47	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00910000146589	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171	ENSGT00940000163007	ENSGT00940000162805	ENSGT00940000154761
Rabbit	MODERN SPECIES	11	RNF103 (ENSOCUG00000029277)	ENSOCUG00000010342	KDM3A (ENSOCUG00000010324)	ENSOCUG00000034180	REEP1 (ENSOCUG00000010196)	MRPL35 (ENSOCUG00000010193)	ENSOCUG00000010188	IMMT (ENSOCUG00000010178)	ENSOCUG00000010161	POLR1A (ENSOCUG00000010138)	ST3GAL5 (ENSOCUG00000010126)	ATOH8 (ENSOCUG00000003528)	ENSOCUG00000020733	USP39 (ENSOCUG00000010070)	ENSOCUG00000010066	TMEM150A (ENSOCUG00000007956) ##22	ENSOCUG00000007951	VAMP5 (ENSOCUG00000025906)	VAMP8 (ENSOCUG00000002375)	GGCX (ENSOCUG00000002368)	MAT2A (ENSOCUG00000002361)	ENSOCUG00000039138	CAPG (ENSOCUG00000002341)	ELMOD3 (ENSOCUG00000002332)	RETSAT (ENSOCUG00000026865)	ENSOCUG00000008764	TCF7L1 (ENSOCUG00000008749)	ENSOCUG00000002533	ENSOCUG00000035044	TRABD2A (ENSOCUG00000010075)	TMSB10 (ENSOCUG00000017506)
Pika	MODERN SPECIES	3193												ST3GAL5 (ENSOPRG00000002085)	SFTPB (ENSOPRG00000002060)	USP39 (ENSOPRG00000002019)	C2orf68 (ENSOPRG00000002005)	TMEM150A (ENSOPRG00000001987) ##22	RNF181 (ENSOPRG00000001980)	ENSOPRG00000001972	VAMP8 (ENSOPRG00000001958)	GGCX (ENSOPRG00000001919)	MAT2A (ENSOPRG00000001898)
Marsupialia	ANCESTRAL SPECIES	26	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000168353	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.s	ENSGT00390000017613.t	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
Opossum	MODERN SPECIES		ENSMODG00000009513	RMND5A (ENSMODG00000009489)	RNF103 (ENSMODG00000009480)	CHMP3 (ENSMODG00000009473)	KDM3A (ENSMODG00000009450)	REEP1 (ENSMODG00000009402)	MRPL35 (ENSMODG00000009393)	IMMT (ENSMODG00000009386)	PTCD3 (ENSMODG00000009372)	POLR1A (ENSMODG00000009335)	ST3GAL5 (ENSMODG00000009287)	ENSMODG00000039022	ENSMODG00000015643	USP39 (ENSMODG00000015632)	ENSMODG00000015624	TMEM150A (ENSMODG00000015622) ##22	RNF181 (ENSMODG00000015616)	ENSMODG00000047247	ENSMODG00000050911	VAMP8 (ENSMODG00000015607)	GGCX (ENSMODG00000015606)	MAT2A (ENSMODG00000015604)	CAPG (ENSMODG00000015599)	ELMOD3 (ENSMODG00000015595)	ENSMODG00000015593	ENSMODG00000023037	ENSMODG00000023038	ENSMODG00000050755	ENSMODG00000038085	ENSMODG00000042124	ENSMODG00000039529
Marsupialia_b	ANCESTRAL SPECIES	23	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000168353	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.s	ENSGT00390000017613.t	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
Diprotodontia	ANCESTRAL SPECIES	35	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000168353	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.s	ENSGT00390000017613.t	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
Diprotodontia_a	ANCESTRAL SPECIES	34	ENSGT00940000156588	ENSGT00940000153203.A.b	ENSGT00390000006413	ENSGT00950000182832.C	ENSGT00940000160135	ENSGT00940000159532	ENSGT00390000007547	ENSGT00390000002313	ENSGT00390000016876	ENSGT00920000149138	ENSGT00940000157929	ENSGT00940000161151	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000168353	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000159305	ENSGT00390000009488	ENSGT00390000017613.s	ENSGT00390000017613.t	ENSGT00530000064712	ENSGT00940000157038	ENSGT00510000047171
koala	MODERN SPECIES	191	ENSPCIG00000017045	RMND5A (ENSPCIG00000035980)	RNF103 (ENSPCIG00000017052)	CHMP3 (ENSPCIG00000004340)	KDM3A (ENSPCIG00000004328)	REEP1 (ENSPCIG00000004307)	MRPL35 (ENSPCIG00000004298)	IMMT (ENSPCIG00000004284)	ENSPCIG00000004240	POLR1A (ENSPCIG00000004222)	ST3GAL5 (ENSPCIG00000032993)	ATOH8 (ENSPCIG00000004215)	ENSPCIG00000004203	USP39 (ENSPCIG00000004196)	C2orf68 (ENSPCIG00000004192)	TMEM150A (ENSPCIG00000004183) ##22	ENSPCIG00000004174	VAMP5 (ENSPCIG00000032905)	VAMP8 (ENSPCIG00000031421)	GGCX (ENSPCIG00000004155)	MAT2A (ENSPCIG00000004154)	ENSPCIG00000009164	CAPG (ENSPCIG00000007456)	ELMOD3 (ENSPCIG00000007453)	ENSPCIG00000032043	ENSPCIG00000025073	ENSPCIG00000004280	ENSPCIG00000010251	ENSPCIG00000034125	TCF7L1 (ENSPCIG00000006486)	KCMF1 (ENSPCIG00000009893)
Common wonbat	MODERN SPECIES	922	ENSVURG00010010491	RMND5A (ENSVURG00010010482)	RNF103 (ENSVURG00010010471)	CHMP3 (ENSVURG00010010466)	KDM3A (ENSVURG00010009556)	REEP1 (ENSVURG00010009406)	MRPL35 (ENSVURG00010009388)	IMMT (ENSVURG00010009377)	PTCD3 (ENSVURG00010009360)	POLR1A (ENSVURG00010009333)	ST3GAL5 (ENSVURG00010009321)	ATOH8 (ENSVURG00010009311)	ENSVURG00010009280	USP39 (ENSVURG00010009267)	C2orf68 (ENSVURG00010009254)	TMEM150A (ENSVURG00010009241) ##22	RNF181 (ENSVURG00010009239)	ENSVURG00010009228	VAMP5 (ENSVURG00010009223)	VAMP8 (ENSVURG00010009216)	GGCX (ENSVURG00010009199)	MAT2A (ENSVURG00010009192)	CAPG (ENSVURG00010009179)	ELMOD3 (ENSVURG00010009166)
Wallaby	MODERN SPECIES	7704																TMEM150A (ENSMEUG00000013804) ##22	RNF181 (ENSMEUG00000013796)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000011323	ENSSHAG00000020804	RMND5A (ENSSHAG00000030636)	RNF103 (ENSSHAG00000032302)	CHMP3 (ENSSHAG00000012934)	KDM3A (ENSSHAG00000013168)	REEP1 (ENSSHAG00000031435)	IMMT (ENSSHAG00000014516)	PTCD3 (ENSSHAG00000014622)	POLR1A (ENSSHAG00000014739)	ST3GAL5 (ENSSHAG00000029810)	ATOH8 (ENSSHAG00000020983)	ENSSHAG00000015982	USP39 (ENSSHAG00000016049)	C2orf68 (ENSSHAG00000024656)	TMEM150A (ENSSHAG00000016184) ##22	ENSSHAG00000022364	VAMP5 (ENSSHAG00000016279)	ENSSHAG00000032378	GGCX (ENSSHAG00000023998)	MAT2A (ENSSHAG00000025075)	ENSSHAG00000031524	CAPG (ENSSHAG00000004491)	ENSSHAG00000004885	ENSSHAG00000005344	ENSSHAG00000026447	ENSSHAG00000030894	TCF7L1 (ENSSHAG00000006659)	KCMF1 (ENSSHAG00000009198)	ENSSHAG00000030238	TRABD2A (ENSSHAG00000010584)
Platypus	MODERN SPECIES	2	ENSOANG00000044856	ENSOANG00000005197	ENSOANG00000010546	ENSOANG00000010547	ENSOANG00000040315	ENSOANG00000010549	ENSOANG00000041181	ENSOANG00000041011	IL1F10 (ENSOANG00000010551)	IL1RN (ENSOANG00000010552)	ENSOANG00000010553	PAX8 (ENSOANG00000010554)	ENSOANG00000008859	USP39 (ENSOANG00000008860)	ENSOANG00000036633	TMEM150A (ENSOANG00000001771) ##22	ENSOANG00000040133	ENSOANG00000001769	VAMP8 (ENSOANG00000050900)	GGCX (ENSOANG00000003061)	MAT2A (ENSOANG00000041477)	ENSOANG00000044668	CAPG (ENSOANG00000001114)	ELMOD3 (ENSOANG00000001113)	RETSAT (ENSOANG00000012616)	CNNM3 (ENSOANG00000012493)	ENSOANG00000050667	SEMA4C (ENSOANG00000000249)	ENSOANG00000040675	PURB (ENSOANG00000041511)	ENSOANG00000048391
Sauria	ANCESTRAL SPECIES	27	ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Lepidosauria	ANCESTRAL SPECIES	20	ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909
Episquamata	ANCESTRAL SPECIES	24													ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00940000159627	ENSGT00940000157631	ENSGT00390000013048
Toxicofera	ANCESTRAL SPECIES	49					ENSGT00940000156168.B	ENSGT00940000153139.B.a	ENSGT00390000016333	ENSGT00950000182850.a.b.b	ENSGT00390000016151	ENSGT00950000182936.a.b.b	ENSGT00390000002931	ENSGT00940000161674	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000173670	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00940000159627	ENSGT00940000157631	ENSGT00390000013048	ENSGT00940000164825
Elapidae	ANCESTRAL SPECIES	35	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B	ENSGT00940000153139.B.a	ENSGT00390000016333	ENSGT00950000182850.a.b.b	ENSGT00390000016151	ENSGT00950000182936.a.b.b	ENSGT00390000002931	ENSGT00940000161674	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT00940000153745.a	ENSGT00940000165233
Elapidae_a	ANCESTRAL SPECIES	58	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B	ENSGT00940000153139.B.a	ENSGT00390000016333	ENSGT00950000182850.a.b.b	ENSGT00390000016151	ENSGT00950000182936.a.b.b	ENSGT00390000002931	ENSGT00940000161674	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT00940000153745.a	ENSGT00940000165233
Acanthophiinae	ANCESTRAL SPECIES	40	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00950000182943.kb.a	ENSGT00940000156168.B	ENSGT00940000153139.B.a	ENSGT00390000016333	ENSGT00950000182850.a.b.b	ENSGT00390000016151	ENSGT00950000182936.a.b.b	ENSGT00390000002931.f	ENSGT00940000161674	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000165973	ENSGT00730000111371	ENSGT00940000160058	ENSGT00390000006707	ENSGT00510000046985.m	ENSGT00390000011206.a	ENSGT00940000154962.A	ENSGT00390000011031	ENSGT00940000159446	ENSGT00730000111237	ENSGT00940000159299	ENSGT00440000033552	ENSGT00950000182787.C	ENSGT00940000153745.a
Mainland tiger snake	MODERN SPECIES	232	ENSNSUG00000020308	STAMBP (ENSNSUG00000020309)	ENSNSUG00000020311	ENSNSUG00000020312	GFRA2 (ENSNSUG00000020313)	XPO7 (ENSNSUG00000020314)	PBDC1 (ENSNSUG00000020315)	NDUFA10 (ENSNSUG00000020316)	ENSNSUG00000020317	ENSNSUG00000020318	NUDT18 (ENSNSUG00000020319)	REEP4 (ENSNSUG00000020320)	ENSNSUG00000020321	USP39 (ENSNSUG00000020322)	C2orf68 (ENSNSUG00000020323)	TMEM150A (ENSNSUG00000020324) ##22	ENSNSUG00000020325	VAMP5 (ENSNSUG00000020326)	TGFA (ENSNSUG00000020327)	FAM136A (ENSNSUG00000020328)	SNRPG (ENSNSUG00000020329)	PCYOX1 (ENSNSUG00000020330)	TIA1 (ENSNSUG00000020331)	C2orf42 (ENSNSUG00000020332)	MXD1 (ENSNSUG00000020333)	SNRNP27 (ENSNSUG00000020334)	ADD2 (ENSNSUG00000020336)	FIGLA (ENSNSUG00000020340)	ENSNSUG00000020341	HK2 (ENSNSUG00000020342)	TACR1 (ENSNSUG00000020343)
Eastern brown snake	MODERN SPECIES	76	ENSPTXG00000013476	STAMBP (ENSPTXG00000013478)	ENSPTXG00000013480	ENSPTXG00000013481	GFRA2 (ENSPTXG00000013483)	XPO7 (ENSPTXG00000013490)	PBDC1 (ENSPTXG00000015088)	DMTN (ENSPTXG00000015092)	NDUFA10 (ENSPTXG00000015687)	FHIP2B (ENSPTXG00000015706)	ENSPTXG00000015707	REEP4 (ENSPTXG00000015708)	ENSPTXG00000015709	USP39 (ENSPTXG00000015711)	C2orf68 (ENSPTXG00000016597)	TMEM150A (ENSPTXG00000016598) ##22	ENSPTXG00000016600	VAMP5 (ENSPTXG00000016601)	TGFA (ENSPTXG00000016603)	FAM136A (ENSPTXG00000016604)	SNRPG (ENSPTXG00000016606)	PCYOX1 (ENSPTXG00000016608)	TIA1 (ENSPTXG00000016609)	C2orf42 (ENSPTXG00000016611)	MXD1 (ENSPTXG00000016612)	SNRNP27 (ENSPTXG00000016613)	ADD2 (ENSPTXG00000016614)	FIGLA (ENSPTXG00000016615)	ENSPTXG00000016616	HK2 (ENSPTXG00000016617)	TACR1 (ENSPTXG00000016620)
Blue-lipped sea krait	MODERN SPECIES	3262	UFM1 (ENSLLTG00000005451)	KANSL3 (ENSLLTG00000005487)	DUSP11 (ENSLLTG00000005571)	STAMBP (ENSLLTG00000005583)	ENSLLTG00000005598	ENSLLTG00000005606	GFRA2 (ENSLLTG00000005617)	XPO7 (ENSLLTG00000005630)	DMTN (ENSLLTG00000005664)	NDUFA10 (ENSLLTG00000005690)	FHIP2B (ENSLLTG00000005702)	REEP4 (ENSLLTG00000005728)	ENSLLTG00000005760	USP39 (ENSLLTG00000005789)	C2orf68 (ENSLLTG00000005814)	TMEM150A (ENSLLTG00000005820) ##22	ENSLLTG00000005826	VAMP5 (ENSLLTG00000005833)
Indian cobra	MODERN SPECIES	7	ENSNNAG00000006182	STAMBP (ENSNNAG00000006152)	ACTG2 (ENSNNAG00000006120)	ENSNNAG00000006103	GFRA2 (ENSNNAG00000006075)	XPO7 (ENSNNAG00000006001)	ENSNNAG00000005961	DMTN (ENSNNAG00000005920)	NDUFA10 (ENSNNAG00000005886)	FHIP2B (ENSNNAG00000005848)	NUDT18 (ENSNNAG00000005830)	REEP4 (ENSNNAG00000005653)	SFTPB (ENSNNAG00000005606)	C2orf68 (ENSNNAG00000005564)	USP39 (ENSNNAG00000005511)	TMEM150A (ENSNNAG00000005479) ##22	ENSNNAG00000005460	VAMP5 (ENSNNAG00000005451)	TGFA (ENSNNAG00000005430)	FAM136A (ENSNNAG00000005412)	SNRPG (ENSNNAG00000005396)	PCYOX1 (ENSNNAG00000005378)	TIA1 (ENSNNAG00000005335)	C2orf42 (ENSNNAG00000005288)	MXD1 (ENSNNAG00000005261)	SNRNP27 (ENSNNAG00000005239)	ADD2 (ENSNNAG00000005198)	FIGLA (ENSNNAG00000005187)	HK2 (ENSNNAG00000005114)	TACR1 (ENSNNAG00000005089)	ENSNNAG00000005071
Lizard	MODERN SPECIES	1215											ENSACAG00000024978	ENSACAG00000008024	ENSACAG00000008090	USP39 (ENSACAG00000008125)	C2orf68 (ENSACAG00000008168)	TMEM150A (ENSACAG00000020953) ##22	RNF181 (ENSACAG00000036371)	GGCX (ENSACAG00000002161)	ENSACAG00000040528	ENSACAG00000001998	ENSACAG00000001990	ENSACAG00000001886	ENSACAG00000001862	STAMBP (ENSACAG00000001804)	ACTG2 (ENSACAG00000001718)	DGUOK (ENSACAG00000028765)	TET3 (ENSACAG00000001632)	ENSACAG00000027223	ENSACAG00000001631
Laterata	ANCESTRAL SPECIES	44													ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00940000161614	ENSGT00940000156918	ENSGT00390000010391	ENSGT00390000007636	ENSGT00940000155847	ENSGT00940000153710.a	ENSGT00940000154148.a.b	ENSGT00940000159627	ENSGT00940000157631	ENSGT00390000013048	ENSGT00940000164825
Argentine black and white tegu	MODERN SPECIES	94	APC2 (ENSSMRG00000016340)	TJP3 (ENSSMRG00000016339)	APBA3 (ENSSMRG00000016338)	GFRA2 (ENSSMRG00000016335)	ENSSMRG00000016334	XPO7 (ENSSMRG00000016333)	ENSSMRG00000016332	DMTN (ENSSMRG00000016329)	NDUFA10 (ENSSMRG00000016327)	FHIP2B (ENSSMRG00000016325)	NUDT18 (ENSSMRG00000016323)	REEP4 (ENSSMRG00000016321)	ENSSMRG00000016317	USP39 (ENSSMRG00000016314)	C2orf68 (ENSSMRG00000016312)	TMEM150A (ENSSMRG00000016309) ##22	RNF181 (ENSSMRG00000016308)	VAMP5 (ENSSMRG00000016307)	VAMP8 (ENSSMRG00000016306)	GGCX (ENSSMRG00000016305)	DKK4 (ENSSMRG00000016304)	POLB (ENSSMRG00000016114)	UFM1 (ENSSMRG00000016113)	KANSL3 (ENSSMRG00000015843)	ENSSMRG00000015833	STAMBP (ENSSMRG00000015828)	ACTG2 (ENSSMRG00000015827)	DGUOK (ENSSMRG00000015825)	ENSSMRG00000015821	BOLA3 (ENSSMRG00000015819)	ENSSMRG00000015815
Common wall lizard	MODERN SPECIES	16	GFPT1 (ENSPMRG00000011738)	ENSPMRG00000011886	AAK1 (ENSPMRG00000011899)	ANXA4 (ENSPMRG00000011958)	TSR1 (ENSPMRG00000011965)	ENSPMRG00000011995	TGFA (ENSPMRG00000012057)	FAM136A (ENSPMRG00000012065)	SNRPG (ENSPMRG00000012069)	PCYOX1 (ENSPMRG00000012072)	TIA1 (ENSPMRG00000012079)	C2orf42 (ENSPMRG00000012098)	ENSPMRG00000012109	ENSPMRG00000012116	MXD1 (ENSPMRG00000012129)	TMEM150A (ENSPMRG00000012146) ##22	RNF181 (ENSPMRG00000012152)	VAMP8 (ENSPMRG00000012154)	GKN1 (ENSPMRG00000012157)	GKN2 (ENSPMRG00000012160)	BMP10 (ENSPMRG00000012162)	ENSPMRG00000012164	ENSPMRG00000012167	CDS2 (ENSPMRG00000012169)	ENSPMRG00000012181	ENSPMRG00000012184	TMEM230 (ENSPMRG00000012185)	SLC23A2 (ENSPMRG00000012189)	RASSF2 (ENSPMRG00000012206)	ENSPMRG00000012217	ENSPMRG00000012220
tuatara	MODERN SPECIES	704	CKAP2L (ENSSPUG00000000352)	NT5DC4 (ENSSPUG00000000379)	SLC20A1 (ENSSPUG00000000609)	MRPS24 (ENSSPUG00000000628)	NPC1L1 (ENSSPUG00000000641)	DDX56 (ENSSPUG00000000784)	TMED4 (ENSSPUG00000000791)	ENSSPUG00000000811	IL36RN (ENSSPUG00000000818)	ENSSPUG00000000825	ENSSPUG00000000834	PSD4 (ENSSPUG00000000840)	PAX8 (ENSSPUG00000000846)	USP39 (ENSSPUG00000000888)	C2orf68 (ENSSPUG00000000938)	TMEM150A (ENSSPUG00000000942) ##22	RNF181 (ENSSPUG00000000945)	VAMP5 (ENSSPUG00000000952)	ETS1 (ENSSPUG00000000956)	FLI1 (ENSSPUG00000000976)	KCNJ5 (ENSSPUG00000001017)	ARHGAP32 (ENSSPUG00000001031)	ENSSPUG00000001077	BARX2 (ENSSPUG00000001087)	TMEM45B (ENSSPUG00000001098)	APLP2 (ENSSPUG00000001142)	PRDM10 (ENSSPUG00000001178)	NFRKB (ENSSPUG00000001270)	ST14 (ENSSPUG00000001296)	ZBTB44 (ENSSPUG00000001341)	ADAMTS8 (ENSSPUG00000001381)
Archelosauria	ANCESTRAL SPECIES	29	ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Cryptodira	ANCESTRAL SPECIES	30	ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Testudinoidea	ANCESTRAL SPECIES		ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992.j	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Testudinidae	ANCESTRAL SPECIES	55	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00610000087417.b	ENSGT00940000161711	ENSGT00390000007992.j	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00940000166629	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b
Goode s thornscrub tortoise	MODERN SPECIES	11	NT5DC4 (ENSGEVG00005000883)	SLC20A1 (ENSGEVG00005000937)	MRPS24 (ENSGEVG00005000963)	NPC1L1 (ENSGEVG00005001011)	DDX56 (ENSGEVG00005001091)	TMED4 (ENSGEVG00005001113)	ENSGEVG00005001125	IL36RN (ENSGEVG00005001146)	PSD4 (ENSGEVG00005001176)	PAX8 (ENSGEVG00005001218)	ENSGEVG00005001256	ENSGEVG00005001267	SFTPB (ENSGEVG00005001278)	USP39 (ENSGEVG00005001305)	C2orf68 (ENSGEVG00005001327)	TMEM150A (ENSGEVG00005001337) ##22	RNF181 (ENSGEVG00005001346)	VAMP5 (ENSGEVG00005001359)	VAMP8 (ENSGEVG00005001371)	ENSGEVG00005001383	GGCX (ENSGEVG00005001392)	MAT2A (ENSGEVG00005001405)	ENSGEVG00005001433	POLM (ENSGEVG00005001484)	ENSGEVG00005001539	H2AZ2 (ENSGEVG00005001553)	PURB (ENSGEVG00005001570)	ENSGEVG00005001583	ENSGEVG00005001598	ACTR1B (ENSGEVG00005001617)	COX5B (ENSGEVG00005001707)
Abingdon island giant tortoise	MODERN SPECIES	1500	CKAP2L (ENSCABG00000012421)	NT5DC4 (ENSCABG00000012414)	SLC20A1 (ENSCABG00000012411)	MRPS24 (ENSCABG00000012408)	NPC1L1 (ENSCABG00000012319)	DDX56 (ENSCABG00000012315)	TMED4 (ENSCABG00000012313)	ENSCABG00000012232	IL36RN (ENSCABG00000012226)	PSD4 (ENSCABG00000012224)	PAX8 (ENSCABG00000012219)	ENSCABG00000012216	SFTPB (ENSCABG00000012215)	USP39 (ENSCABG00000012212)	C2orf68 (ENSCABG00000012211)	TMEM150A (ENSCABG00000012187) ##22	RNF181 (ENSCABG00000012185)	VAMP8 (ENSCABG00000012184)	GGCX (ENSCABG00000012180)	MAT2A (ENSCABG00000012179)	ENSCABG00000012178	ENSCABG00000012177	POLM (ENSCABG00000012176)	ENSCABG00000012175	ENSCABG00000012174	ENSCABG00000012172	ENSCABG00000012171	ACTR1B (ENSCABG00000012080)	COX5B (ENSCABG00000012079)	SEMA4C (ENSCABG00000012078)	ANKRD39 (ENSCABG00000012077)
Emydidae	ANCESTRAL SPECIES		ENSGT00950000182943.jb	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992.j	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000165439	ENSGT00940000158490	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000009948.d	ENSGT00940000161587	ENSGT00390000011010.b	ENSGT00940000159885
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	17	ENSTMTG00000014804	ENSTMTG00000014823	ENSTMTG00000014875	ENSTMTG00000014939	ENSTMTG00000000065	ENSTMTG00000000101	ENSTMTG00000000120	ENSTMTG00000000139	ENSTMTG00000000156	ENSTMTG00000000194	ENSTMTG00000000239	ENSTMTG00000000294	ENSTMTG00000000379	ENSTMTG00000000400	ENSTMTG00000000419	ENSTMTG00000000440 ##22	ENSTMTG00000000453	ENSTMTG00000000538	ENSTMTG00000000554	ENSTMTG00000000568	ENSTMTG00000000585	ENSTMTG00000000613	ENSTMTG00000000626	ENSTMTG00000000686	ENSTMTG00000000767	ENSTMTG00000000775	ENSTMTG00000000788	ENSTMTG00000000796	ENSTMTG00000000808	ENSTMTG00000000818	ENSTMTG00000000838
Three-toed box turtle	MODERN SPECIES	18	ENSTMTG00000002875	ENSTMTG00000002880	ENSTMTG00000002886	ENSTMTG00000002905	ENSTMTG00000002931	ENSTMTG00000002943	ENSTMTG00000002948	ENSTMTG00000002958	ENSTMTG00000002962	ENSTMTG00000002968	ENSTMTG00000002971	ENSTMTG00000002983	ENSTMTG00000003023	ENSTMTG00000003042	ENSTMTG00000003052	ENSTMTG00000003064 ##22	RNF181 (ENSTMTG00000003075)	ENSTMTG00000003088	ENSTMTG00000003097	ENSTMTG00000003103	ENSTMTG00000003123	ENSTMTG00000003135	ENSTMTG00000003150	ENSTMTG00000003188	ENSTMTG00000003373	H2AZ2 (ENSTMTG00000003395)	ENSTMTG00000003420	ENSTMTG00000003433	ENSTMTG00000003451	ENSTMTG00000003485	ENSTMTG00000003521
painted turtle	MODERN SPECIES	877	NT5DC4 (ENSCPBG00000023262)	CKAP2L (ENSCPBG00000023258)	ENSCPBG00000023255	ENSCPBG00000023252	ENSCPBG00000023250	ENSCPBG00000023249	IL36RN (ENSCPBG00000023248)	PSD4 (ENSCPBG00000023247)	PAX8 (ENSCPBG00000023246)	ENSCPBG00000023245	ENSCPBG00000023244	SFTPB (ENSCPBG00000023243)	USP39 (ENSCPBG00000023242)	ENSCPBG00000023241	C2orf68 (ENSCPBG00000023240)	TMEM150A (ENSCPBG00000023238) ##22	RNF181 (ENSCPBG00000023237)	VAMP5 (ENSCPBG00000023236)	VAMP8 (ENSCPBG00000023235)	GGCX (ENSCPBG00000023234)	MAT2A (ENSCPBG00000023233)	ENSCPBG00000023231	ENSCPBG00000023230	POLM (ENSCPBG00000023227)	ENSCPBG00000023224	H2AZ2 (ENSCPBG00000023223)	PURB (ENSCPBG00000023221)	ENSCPBG00000023219	ENSCPBG00000023218	ACTR1B (ENSCPBG00000023217)	COX5B (ENSCPBG00000023216)
Chinese turtle	MODERN SPECIES	1660														USP39 (ENSPSIG00000006259)	GGCX (ENSPSIG00000006744)	TMEM150A (ENSPSIG00000011552) ##22	VAMP5 (ENSPSIG00000012528)	ENSPSIG00000012775	VAMP8 (ENSPSIG00000013379)	MAT2A (ENSPSIG00000013880)
Archosauria	ANCESTRAL SPECIES	38	ENSGT00950000182943.kb.a	ENSGT00530000063691.a	ENSGT00940000162631	ENSGT00390000014879.c.a	ENSGT00390000011179	ENSGT00940000159904	ENSGT00550000074946	ENSGT00940000159012	ENSGT00950000182943.kb.b.a.b.b	ENSGT00950000182943.kb.b.a.b.a	ENSGT00940000161976	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000158490	ENSGT00530000064017.b	ENSGT00940000159885	ENSGT00940000160547	ENSGT00940000156317	ENSGT00940000155596	ENSGT00390000007636	ENSGT00940000161253	ENSGT00390000004149	ENSGT00940000153710.a
Australian saltwater crocodile	MODERN SPECIES	51	TET3 (ENSCPRG00005016623)	ENSCPRG00005016634	CNNM4 (ENSCPRG00005000048)	LMAN2L (ENSCPRG00005000049)	ENSCPRG00005000051	ENSCPRG00005000053	KANSL3 (ENSCPRG00005000078)	ARID5A (ENSCPRG00005000102)	ENSCPRG00005000111	PSD4 (ENSCPRG00005000116)	PAX8 (ENSCPRG00005000129)	ENSCPRG00005000142	USP39 (ENSCPRG00005000146)	C2orf68 (ENSCPRG00005000155)	ENSCPRG00005000164	TMEM150A (ENSCPRG00005000180) ##22	VAMP5 (ENSCPRG00005000186)	VAMP8 (ENSCPRG00005000205)	GGCX (ENSCPRG00005000222)	MAT2A (ENSCPRG00005000252)	POLM (ENSCPRG00005000370)	ENSCPRG00005000376	H2AZ2 (ENSCPRG00005000382)	PURB (ENSCPRG00005000388)	SEMA4C (ENSCPRG00005000404)	POLB (ENSCPRG00005000434)	VDAC3 (ENSCPRG00005000463)	DKK4 (ENSCPRG00005000482)	IKBKB (ENSCPRG00005000500)	PLAT (ENSCPRG00005000562)	AP3M2 (ENSCPRG00005000578)
Anura	ANCESTRAL SPECIES	30	ENSGT00950000182926.b.c	ENSGT00940000166166	ENSGT00940000158444	ENSGT00940000158973.b	ENSGT00390000011179	ENSGT00390000014879.c.a	ENSGT00940000162631	ENSGT00530000063691.a	ENSGT01070000257222	ENSGT00950000182943	ENSGT00940000155061.b	ENSGT00940000161868	ENSGT00940000161711	ENSGT00390000007992	ENSGT00390000001901	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000160325.b	ENSGT00390000014909	ENSGT00950000183185.c.a.a	ENSGT00940000162822	ENSGT00940000158490	ENSGT00900000140979.a.b	ENSGT00950000183162.a.b	ENSGT00940000164226	ENSGT00390000011010.a.a	ENSGT00940000159885	ENSGT00940000160547.g	ENSGT00940000161102	ENSGT00940000156317	ENSGT00940000155596
Leishan spiny toad	MODERN SPECIES	6	MRPS24 (ENSLLEG00000005619)	SLC20A1 (ENSLLEG00000005530)	NT5DC4 (ENSLLEG00000005378)	CKAP2L (ENSLLEG00000005273)	ENSLLEG00000005192	ENSLLEG00000005133	ENSLLEG00000005103	ENSLLEG00000005078	ENSLLEG00000005060	ENSLLEG00000005004	ENSLLEG00000004966	PAX8 (ENSLLEG00000004912)	ENSLLEG00000004871	USP39 (ENSLLEG00000004769)	C2orf68 (ENSLLEG00000004733)	TMEM150A (ENSLLEG00000004725) ##22	RNF181 (ENSLLEG00000004704)	ENSLLEG00000004685	ENSLLEG00000004671	ENSLLEG00000004663	VAMP8 (ENSLLEG00000004650)	MAT2A (ENSLLEG00000004628)	GGCX (ENSLLEG00000004549)	ENSLLEG00000004521	ENSLLEG00000004486	H2AZ2 (ENSLLEG00000004452)	ENSLLEG00000004425	ENSLLEG00000004411	PURB (ENSLLEG00000004391)	ENSLLEG00000004384	COX5B (ENSLLEG00000004367)
Frog	MODERN SPECIES	3	nudcd3 (ENSXETG00000018972)	camk2b (ENSXETG00000018971)	mrps24 (ENSXETG00000018967)	slc20a1 (ENSXETG00000018957)	nt5dc4 (ENSXETG00000018955)	ckap2l (ENSXETG00000041090)	ENSXETG00000041755	ENSXETG00000041287	il1b (ENSXETG00000001276)	psd4 (ENSXETG00000001273)	pax8 (ENSXETG00000001272)	sftpb (ENSXETG00000032549)	usp39 (ENSXETG00000001269)	c2orf68 (ENSXETG00000025802)	ENSXETG00000040066	tmem150a (ENSXETG00000036936) ##22	vamp8 (ENSXETG00000001266)	ggcx (ENSXETG00000001264)	tfap2b (ENSXETG00000001263)	sh2d6 (ENSXETG00000037696)	ENSXETG00000001257	polm (ENSXETG00000001259)	otud3 (ENSXETG00000001258)	npy4r (ENSXETG00000033678)	cox5b.1 (ENSXETG00000001255)	ENSXETG00000038856	sema4c (ENSXETG00000001251)	ankrd39 (ENSXETG00000031480)	gdi1 (ENSXETG00000009465)	cnnm4 (ENSXETG00000001249)	ubxn10 (ENSXETG00000001248)
Coelacanth	MODERN SPECIES	2178													ENSLACG00000003884	USP39 (ENSLACG00000003152)	C2orf68 (ENSLACG00000002785)	TMEM150A (ENSLACG00000000995) ##22
Actinopterygii	ANCESTRAL SPECIES	637																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b
Neopterygii	ANCESTRAL SPECIES	301																ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a	ENSGT00940000165233	ENSGT00940000157488	ENSGT00940000164825	ENSGT01050000244898.b.a	ENSGT00940000159627
Osteoglossocephalai	ANCESTRAL SPECIES	94	ENSGT00940000155742.a.a	ENSGT00940000154412.A	ENSGT00390000003837	ENSGT00940000157703	ENSGT00940000175893	ENSGT00390000014940	ENSGT00940000159206.a	ENSGT00940000157199	ENSGT00940000166580	ENSGT00390000011084	ENSGT00940000154938	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00940000170695	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399
Osteoglossiformes	ANCESTRAL SPECIES	35	ENSGT00950000183158.E	ENSGT00940000155742.a.a	ENSGT00940000154412.A	ENSGT00390000003837	ENSGT00940000157703	ENSGT00390000014940	ENSGT00940000159206.a	ENSGT00940000157199	ENSGT00940000166580	ENSGT00390000011084	ENSGT00940000154938	ENSGT00940000156980.a	ENSGT00390000014618.b.c.a	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000170695	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147.d	ENSGT00940000154399	ENSGT00390000016127	ENSGT00940000164889	ENSGT00530000064035.b	ENSGT00510000049510	ENSGT00390000006998	ENSGT00940000176908
P. kingsleyae	MODERN SPECIES	169														C2orf42 (ENSPKIG00000017025)	tia1 (ENSPKIG00000017052)	tmem150aa (ENSPKIG00000017087) ##22	ENSPKIG00000017101	ENSPKIG00000017122	pisd (ENSPKIG00000017188)	ENSPKIG00000017236	rnf224 (ENSPKIG00000017299)	prpf4 (ENSPKIG00000017259)	cdc26 (ENSPKIG00000017309)	SLC31A1 (ENSPKIG00000017329)	atp6v1g1 (ENSPKIG00000017345)	ENSPKIG00000017375	anapc2 (ENSPKIG00000017399)	ssna1 (ENSPKIG00000017420)	TPRN (ENSPKIG00000017441)	tmem203 (ENSPKIG00000017450)	alad (ENSPKIG00000017469)
Asian bonytongue	MODERN SPECIES	21	FBN2 (ENSSFOG00015007953)	slc12a2 (ENSSFOG00015008139)	CTXN3 (ENSSFOG00015008217)	prrc1 (ENSSFOG00015008225)	megf10 (ENSSFOG00015008294)	C5orf63 (ENSSFOG00015008399)	ENSSFOG00015030457	ENSSFOG00015008528	lmnb1 (ENSSFOG00015008510)	phax (ENSSFOG00015008542)	aldh7a1 (ENSSFOG00015008594)	GRAMD2B (ENSSFOG00015008665)	ZNF703 (ENSSFOG00015029184)	C2orf42 (ENSSFOG00015008723)	tia1 (ENSSFOG00015008776)	tmem150aa (ENSSFOG00015029061) ##22	ENSSFOG00015008861	ENSSFOG00015026113	ENSSFOG00015008885	pisd (ENSSFOG00015008901)	ENSSFOG00015008942	rnf224 (ENSSFOG00015008948)	prpf4 (ENSSFOG00015008963)	cdc26 (ENSSFOG00015028404)	slc31a1 (ENSSFOG00015026024)	atp6v1g1 (ENSSFOG00015029297)	anapc2 (ENSSFOG00015009044)	ssna1 (ENSSFOG00015009077)	TPRN (ENSSFOG00015028597)	tmem203 (ENSSFOG00015009136)	alad (ENSSFOG00015024894)
Clupeocephala	ANCESTRAL SPECIES	29	ENSGT00950000182787.C	ENSGT00950000182787.E.d.e.a	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000168407	ENSGT00940000154962.A.a.b	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	97	ENSGT00940000157631	ENSGT01070000253744.b.a.a.a.b	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000168407	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00390000003458	ENSGT00940000175215.a.b	ENSGT00940000155874.a	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h	ENSGT00940000160760.b
Otophysi	ANCESTRAL SPECIES	94	ENSGT00610000087464	ENSGT00390000012710	ENSGT00940000165661	ENSGT00390000012355.A.a.a.a	ENSGT00530000063681.b.a	ENSGT00940000166823	ENSGT00440000039046	ENSGT00390000015930	ENSGT00940000155771.d	ENSGT00730000110989.c.b	ENSGT00490000043395	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000157027.n.a	ENSGT00390000012733	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00390000003458	ENSGT00940000175215.a.b	ENSGT00940000155874.a	ENSGT00950000183089.c.b	ENSGT00950000183197.b.a.a	ENSGT00940000165531.b.a	ENSGT00950000182815.a.a.b.h
Characiphysae	ANCESTRAL SPECIES	95	ENSGT00610000087464	ENSGT00390000012710	ENSGT00940000165661	ENSGT00390000012355.A.a.a.a	ENSGT00530000063681.b.a	ENSGT00940000166823	ENSGT00440000039046	ENSGT00390000015930	ENSGT00940000155771.d	ENSGT00730000110989.c.b	ENSGT00490000043395	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000157027.n.a	ENSGT00390000012733	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302
Characiphysae_b	ANCESTRAL SPECIES	112	ENSGT00390000012710.i	ENSGT00390000012710.j.a	ENSGT00940000165661	ENSGT00390000012355.A.a.a.a	ENSGT00530000063681.b.a	ENSGT00940000166823	ENSGT00440000039046	ENSGT00390000015930	ENSGT00940000155771.d	ENSGT00730000110989.c.b	ENSGT00490000043395	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000157027.n.a	ENSGT00390000012733	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302
Characoidei	ANCESTRAL SPECIES	108	ENSGT00390000012710.i.a	ENSGT00390000012710.j.a	ENSGT00940000165661	ENSGT00390000012355.A.a.a.a	ENSGT00530000063681.b.a	ENSGT00940000166823	ENSGT00440000039046	ENSGT00390000015930	ENSGT00940000155771.d	ENSGT00730000110989.c.b	ENSGT00490000043395	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000157027.n.a	ENSGT00390000012733	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302
Mexicana tetra	MODERN SPECIES	80													ENSAMXG00000034908	tango2 (ENSAMXG00000031133)	ENSAMXG00000031554	tmem150aa (ENSAMXG00000001612) ##22	rnf181 (ENSAMXG00000001639)	vamp5 (ENSAMXG00000037732)	vamp8 (ENSAMXG00000001657)	ncaph (ENSAMXG00000001661)	TACR1 (ENSAMXG00000030275)	ENSAMXG00000036604	zgc:110329 (ENSAMXG00000042059)	SLC4A5 (ENSAMXG00000001672)	ogfod2 (ENSAMXG00000043732)	zgc:113436 (ENSAMXG00000043286)	abcb9 (ENSAMXG00000013961)	vps37ba (ENSAMXG00000034807)	ppp3cca (ENSAMXG00000041596)	adam28 (ENSAMXG00000014073)	tcima (ENSAMXG00000026349)
Red-bellied piranha	MODERN SPECIES	159	ankrd34bb (ENSPNAG00000023865)	fam151b (ENSPNAG00000023856)	ccdc125 (ENSPNAG00000023842)	rad17 (ENSPNAG00000023831)	zgc:86811 (ENSPNAG00000023821)	marveld2b (ENSPNAG00000023789)	oclnb (ENSPNAG00000003781)	gtf2h2 (ENSPNAG00000023738)	erap1b (ENSPNAG00000023675)	erap1b (ENSPNAG00000023599)	erap1b (ENSPNAG00000023523)	naaladl1 (ENSPNAG00000023471)	arvcfb (ENSPNAG00000023452)	tango2 (ENSPNAG00000023391)	ENSPNAG00000023351	tmem150aa (ENSPNAG00000023331) ##22	XCR1 (ENSPNAG00000023298)	XCR1 (ENSPNAG00000023276)	rnf181 (ENSPNAG00000023270)	vamp5 (ENSPNAG00000023252)	vamp8 (ENSPNAG00000023240)	ncaph (ENSPNAG00000023230)	TACR1 (ENSPNAG00000023215)	zgc:110329 (ENSPNAG00000023182)	SLC4A5 (ENSPNAG00000023167)	ogfod2 (ENSPNAG00000003755)	zgc:113436 (ENSPNAG00000023049)	abcb9 (ENSPNAG00000023034)	vps37ba (ENSPNAG00000023027)
Electric eel	MODERN SPECIES	345	si:ch211-214j8.12 (ENSEEEG00000017117)	ENSEEEG00000017118	ENSEEEG00000017119	dhfr (ENSEEEG00000017120)	ankrd34bb (ENSEEEG00000017121)	fam151b (ENSEEEG00000017122)	ccdc125 (ENSEEEG00000017123)	rad17 (ENSEEEG00000017126)	zgc:86811 (ENSEEEG00000017249)	marveld2b (ENSEEEG00000017252)	gtf2h2 (ENSEEEG00000017253)	erap1b (ENSEEEG00000017261)	naaladl1 (ENSEEEG00000017442)	arvcfb (ENSEEEG00000017458)	tango2 (ENSEEEG00000017497)	tmem150aa (ENSEEEG00000017499) ##22	rnf181 (ENSEEEG00000017500)	ENSEEEG00000017501
Channel catfish	MODERN SPECIES	14	ankrd34b (ENSIPUG00000022851)	fam151b (ENSIPUG00000022837)	ccdc125 (ENSIPUG00000022815)	rad17 (ENSIPUG00000022781)	ak6 (ENSIPUG00000022773)	marveld2b (ENSIPUG00000022768)	ocln (ENSIPUG00000022759)	gtf2h2 (ENSIPUG00000022729)	erap1b (ENSIPUG00000022714)	naaladl1 (ENSIPUG00000022682)	ENSIPUG00000022680	erap1b (ENSIPUG00000022668)	naaladl1 (ENSIPUG00000022654)	arvcfb (ENSIPUG00000022615)	tango2 (ENSIPUG00000022551)	tmem150aa (ENSIPUG00000022536) ##22	rnf181 (ENSIPUG00000022518)	ENSIPUG00000022505	vamp5 (ENSIPUG00000022496)	vamp8 (ENSIPUG00000022474)	ncaph (ENSIPUG00000022452)	TACR1 (ENSIPUG00000022448)	zgc:110329 (ENSIPUG00000022433)	SLC4A5 (ENSIPUG00000022418)	zgc:113436 (ENSIPUG00000022404)	ogfod2 (ENSIPUG00000022383)	abcb9 (ENSIPUG00000022367)	vps37b (ENSIPUG00000022362)	PPP3CC (ENSIPUG00000022327)	ADAM28 (ENSIPUG00000022305)	ENSIPUG00000022291
Cyprinoidei	ANCESTRAL SPECIES	48	ENSGT00950000182913.A.a.a	ENSGT00610000087464	ENSGT00940000165661	ENSGT00390000012355.A.a.a.a	ENSGT00530000063681.b.a	ENSGT00940000166823	ENSGT00440000039046	ENSGT00390000015930	ENSGT00940000155771.d	ENSGT00730000110989.c.b	ENSGT00490000043395	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000157027.n.a	ENSGT00390000012733	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000112955	ENSGT00390000005772	ENSGT00530000063370.b	ENSGT00390000016002.o.a	ENSGT00770000121827	ENSGT00940000153231.A	ENSGT00940000159633	ENSGT00940000159669.a	ENSGT00940000155596.q	ENSGT00940000158066.o	ENSGT00730000111181	ENSGT00940000160760.b	ENSGT00950000182815.a.a.b.h	ENSGT00940000165531.b.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	637			ENSGT00940000165661.e	ENSGT00390000012355.A.a.a.a.c	ENSGT00530000063681.b.a	ENSGT00940000166823.a	ENSGT00440000039046.c	ENSGT00390000015930.hb	ENSGT00940000155771.d.b	ENSGT00730000110989.c.b.a	ENSGT00490000043395.p	ENSGT00940000159086.o.b	ENSGT01030000234598.b.b.e	ENSGT00940000157027.n.a.e	ENSGT00390000012733.k	ENSGT01030000234578.A.b.a.a.b.c.a ##22	ENSGT00940000165973
Cyprininae_a	ANCESTRAL SPECIES	305			ENSGT00940000165661.e	ENSGT00390000012355.A.a.a.a.c	ENSGT00530000063681.b.a	ENSGT00940000166823.a	ENSGT00440000039046.c	ENSGT00390000015930.hb	ENSGT00940000155771.d.b	ENSGT00730000110989.c.b.a	ENSGT00490000043395.p	ENSGT00940000159086.o.b	ENSGT01030000234598.b.b.e	ENSGT00940000157027.n.a.e	ENSGT00390000012733.k	ENSGT01030000234578.A.b.a.a.b.c.a ##22	ENSGT00940000165973	ENSGT00390000005772.i	ENSGT00530000063370.b.h	ENSGT00390000016002.o.a.a	ENSGT00940000153231.A.c	ENSGT00940000159633.i	ENSGT00940000159669.a.a	ENSGT00940000155596.q.b	ENSGT00940000158066.o.d	ENSGT00730000111181.a	ENSGT00940000160760.b.h	ENSGT00950000182815.a.a.b.h.a	ENSGT00940000165531.b.a.b	ENSGT00950000183197.b.a.a.d	ENSGT00950000183089.c.b.l
Common carp reference	MODERN SPECIES	15	si:ch211-214j8.12 (ENSCCRG00000069787)	ankrd34bb (ENSCCRG00000063774)	fam151b (ENSCCRG00000023456)	ccdc125 (ENSCCRG00000023461)	rad17 (ENSCCRG00000003397)	zgc:86811 (ENSCCRG00000067637)	marveld2b (ENSCCRG00000050371)	oclnb (ENSCCRG00000001754)	gtf2h2 (ENSCCRG00000001764)	erap1b (ENSCCRG00000069973)	naaladl1 (ENSCCRG00000080454)	arvcfb (ENSCCRG00000001177)	ENSCCRG00000058749	tango2 (ENSCCRG00000052723)	ENSCCRG00000080082	tmem150aa (ENSCCRG00000017989) ##22	ccdc117 (ENSCCRG00000062003)	tcn2 (ENSCCRG00000017727)	ENSCCRG00000017723	imp4 (ENSCCRG00000017715)	araf (ENSCCRG00000017614)	zgc:64051 (ENSCCRG00000052719)	lman2lb (ENSCCRG00000052717)	ENSCCRG00000066931	tm2d2 (ENSCCRG00000076382)	ENSCCRG00000070501	ENSCCRG00000066865	ENSCCRG00000040793	hdr (ENSCCRG00000016914)	cyb561a3a (ENSCCRG00000016911)	ENSCCRG00000079757
Golden-line barbel	MODERN SPECIES	194	ela3l (ENSSGRG00000015856)	bco2l (ENSSGRG00000015554)	dhfr (ENSSGRG00000015550)	ankrd34bb (ENSSGRG00000015549)	fam151b (ENSSGRG00000015546)	ccdc125 (ENSSGRG00000015545)	rad17 (ENSSGRG00000014971)	zgc:86811 (ENSSGRG00000014958)	marveld2b (ENSSGRG00000014956)	oclnb (ENSSGRG00000014955)	gtf2h2 (ENSSGRG00000014857)	ENSSGRG00000014848	erap1b (ENSSGRG00000014561)	arvcfb (ENSSGRG00000014530)	tango2 (ENSSGRG00000014526)	tmem150aa (ENSSGRG00000014523) ##22	ENSSGRG00000014522	ccdc117 (ENSSGRG00000014519)	tcn2 (ENSSGRG00000014516)	imp4 (ENSSGRG00000014424)	araf (ENSSGRG00000014013)	zgc:64051 (ENSSGRG00000014011)	lman2lb (ENSSGRG00000014010)	ENSSGRG00000014009	tm2d2 (ENSSGRG00000014008)	ENSSGRG00000014007	ENSSGRG00000014006	UNC5D (ENSSGRG00000014001)	hdr (ENSSGRG00000013997)	cyb561a3a (ENSSGRG00000013993)	histh1l1 (ENSSGRG00000013989)
Cyprininae	ANCESTRAL SPECIES	31	ENSGT01030000234528.B.a.b.w	ENSGT00950000182913.A.a.a	ENSGT00610000087464	ENSGT00940000165661.f	ENSGT00390000012355.A.a.a.a.d	ENSGT00940000166823.b	ENSGT00440000039046.d	ENSGT00390000015930.ib	ENSGT00940000155771.d.a	ENSGT00730000110989.c.b.b	ENSGT00490000043395.o	ENSGT00940000159086.o.a	ENSGT01030000234598.b.b.f	ENSGT00940000157027.n.a.f	ENSGT00390000012733.l	ENSGT01030000234578.A.b.a.a.b.c.b ##22	ENSGT00940000160552	ENSGT00390000005772.i	ENSGT00530000063370.b.h	ENSGT00390000016002.o.a.a	ENSGT00940000153231.A.c	ENSGT00940000159633.i	ENSGT00940000159669.a.a	ENSGT00940000155596.q.b	ENSGT00940000158066.o.d	ENSGT00730000111181.a	ENSGT00940000160760.b.h	ENSGT00950000182815.a.a.b.h.a	ENSGT00940000165531.b.a.b	ENSGT00950000183197.b.a.a.d	ENSGT00950000183089.c.b.l
Goldfish	MODERN SPECIES	3271	fam219ab (ENSCARG00000066193)	ENSCARG00000066187	dhfr (ENSCARG00000066178)	ankrd34bb (ENSCARG00000066176)	ccdc125 (ENSCARG00000066135)	rad17 (ENSCARG00000066115)	zgc:86811 (ENSCARG00000066104)	marveld2b (ENSCARG00000066102)	oclnb (ENSCARG00000066092)	gtf2h2 (ENSCARG00000066059)	erap1b (ENSCARG00000065841)	ENSCARG00000065819	arvcfb (ENSCARG00000063234)	ENSCARG00000063124	tango2 (ENSCARG00000063101)	tmem150aa (ENSCARG00000063065) ##22	ENSCARG00000063040	ccdc117 (ENSCARG00000063019)	tcn2 (ENSCARG00000062959)	RABL6 (ENSCARG00000062934)	ENSCARG00000062918	araf (ENSCARG00000059610)	zgc:64051 (ENSCARG00000059435)	lman2lb (ENSCARG00000059414)	ENSCARG00000059371	tm2d2 (ENSCARG00000059355)	ENSCARG00000059267	UNC5D (ENSCARG00000057910)	cyb561a3a (ENSCARG00000057835)	ENSCARG00000057815	histh1l1 (ENSCARG00000057811)
Cyprininae_a	ANCESTRAL SPECIES		ENSGT01030000234528.B.a.b.w	ENSGT00950000182913.A.a.a	ENSGT00610000087464	ENSGT00940000165661.f	ENSGT00390000012355.A.a.a.a.d	ENSGT00940000166823.b	ENSGT00440000039046.d	ENSGT00390000015930.ib	ENSGT00940000155771.d.a	ENSGT00730000110989.c.b.b	ENSGT00490000043395.o	ENSGT00940000159086.o.a	ENSGT01030000234598.b.b.f	ENSGT00940000157027.n.a.f	ENSGT00390000012733.l	ENSGT01030000234578.A.b.a.a.b.c.b ##22	ENSGT00940000160552	ENSGT00530000063370.b.g	ENSGT00390000016002.o.a.b	ENSGT00770000121827	ENSGT00940000153231.A.d	ENSGT00940000159633.j	ENSGT00940000159669.a.b	ENSGT00940000155596.q.a	ENSGT00940000158066.o.c	ENSGT00730000111181.b	ENSGT00940000160760.b.g	ENSGT00950000182815.a.a.b.h.b	ENSGT00940000165531.b.a.a	ENSGT00950000183197.b.a.a.c	ENSGT00950000183089.c.b.k
Common carp reference	MODERN SPECIES	7	TRPM3 (ENSCCRG00000003758)	fam219ab (ENSCCRG00000062312)	ela3l (ENSCCRG00000063263)	ENSCCRG00000023448	ENSCCRG00000003532	ankrd34bb (ENSCCRG00000003521)	ccdc125 (ENSCCRG00000003513)	rad17 (ENSCCRG00000062948)	zgc:86811 (ENSCCRG00000079444)	marveld2b (ENSCCRG00000003357)	oclnb (ENSCCRG00000059341)	gtf2h2 (ENSCCRG00000002382)	erap1b (ENSCCRG00000056077)	arvcfb (ENSCCRG00000052725)	tango2 (ENSCCRG00000054245)	tmem150aa (ENSCCRG00000055631) ##22	rnf181 (ENSCCRG00000017981)	ENSCCRG00000032468	si:ch211-102c2.4 (ENSCCRG00000079019)	imp4 (ENSCCRG00000017774)	araf (ENSCCRG00000017701)	zgc:64051 (ENSCCRG00000052386)	lman2lb (ENSCCRG00000029893)	ENSCCRG00000066325	tm2d2 (ENSCCRG00000029899)	ENSCCRG00000059033	ENSCCRG00000082516	cyb561a3a (ENSCCRG00000000573)	histh1l1 (ENSCCRG00000082418)	drd7 (ENSCCRG00000024322)	loxl2b (ENSCCRG00000024345)
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	151	dhfr (ENSSGRG00000044436)	ankrd34bb (ENSSGRG00000044437)	ENSSGRG00000044438	ccdc125 (ENSSGRG00000044439)	rad17 (ENSSGRG00000044442)	zgc:86811 (ENSSGRG00000044636)	marveld2b (ENSSGRG00000044642)	oclnb (ENSSGRG00000044644)	gtf2h2 (ENSSGRG00000044652)	erap1b (ENSSGRG00000044999)	naaladl1 (ENSSGRG00000045178)	arvcfb (ENSSGRG00000045194)	ENSSGRG00000045342	tango2 (ENSSGRG00000045343)	tmem150aa (ENSSGRG00000045377) ##22	tmem150aa (ENSSGRG00000045383) ##22	rnf181 (ENSSGRG00000045384)	tcn2 (ENSSGRG00000045394)	RABL6 (ENSSGRG00000045397)	imp4 (ENSSGRG00000045402)	araf (ENSSGRG00000045484)	zgc:64051 (ENSSGRG00000046671)	ENSSGRG00000046673	lman2lb (ENSSGRG00000046675)	ENSSGRG00000046683	tm2d2 (ENSSGRG00000046686)	ENSSGRG00000046696	ENSSGRG00000046706
Golden-line barbel	MODERN SPECIES	151	si:ch211-214j8.12 (ENSSGRG00000044434)	dhfr (ENSSGRG00000044436)	ankrd34bb (ENSSGRG00000044437)	ENSSGRG00000044438	ccdc125 (ENSSGRG00000044439)	rad17 (ENSSGRG00000044442)	zgc:86811 (ENSSGRG00000044636)	marveld2b (ENSSGRG00000044642)	oclnb (ENSSGRG00000044644)	gtf2h2 (ENSSGRG00000044652)	erap1b (ENSSGRG00000044999)	naaladl1 (ENSSGRG00000045178)	arvcfb (ENSSGRG00000045194)	ENSSGRG00000045342	tango2 (ENSSGRG00000045343)	tmem150aa (ENSSGRG00000045377) ##22	tmem150aa (ENSSGRG00000045383) ##22	rnf181 (ENSSGRG00000045384)	tcn2 (ENSSGRG00000045394)	RABL6 (ENSSGRG00000045397)	imp4 (ENSSGRG00000045402)	araf (ENSSGRG00000045484)	zgc:64051 (ENSSGRG00000046671)	ENSSGRG00000046673	lman2lb (ENSSGRG00000046675)	ENSSGRG00000046683	tm2d2 (ENSSGRG00000046686)	ENSSGRG00000046696	ENSSGRG00000046706
Zebrafish	MODERN SPECIES	20	bco2l (ENSDARG00000027620)	si:ch211-214j8.12 (ENSDARG00000092556)	dhfr (ENSDARG00000004251)	ankrd34bb (ENSDARG00000061641)	fam151b (ENSDARG00000020024)	ccdc125 (ENSDARG00000056477)	rad17 (ENSDARG00000018918)	AK6 (ENSDARG00000035573)	marveld2b (ENSDARG00000061651)	oclnb (ENSDARG00000003091)	gtf2h2 (ENSDARG00000016514)	erap1b (ENSDARG00000021859)	naaladl1 (ENSDARG00000020952)	arvcfb (ENSDARG00000061688)	tango2 (ENSDARG00000056550)	tmem150aa (ENSDARG00000068227) ##22	rnf181 (ENSDARG00000023958)	ENSDARG00000093823	ccdc117 (ENSDARG00000091872)	tcn2 (ENSDARG00000036481)	RABL6 (ENSDARG00000077653)	si:ch211-102c2.4 (ENSDARG00000079387)	imp4 (ENSDARG00000054540)	araf (ENSDARG00000054533)	zgc:64051 (ENSDARG00000068233)	lman2lb (ENSDARG00000088663)	ENSDARG00000061509	tm2d2 (ENSDARG00000035515)	ENSDARG00000005943	UNC5D (ENSDARG00000061541)	hdr (ENSDARG00000004392)
Clupeiformes	ANCESTRAL SPECIES	73	ENSGT00940000157631	ENSGT01070000253744.b.a.a.a.b	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000168407	ENSGT01030000234578.A.b.a.a.b.c ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.a
Denticle herring	MODERN SPECIES	2	tet3 (ENSDCDG00000022909)	ENSDCDG00000022636	hk2 (ENSDCDG00000022344)	figla (ENSDCDG00000022329)	add2 (ENSDCDG00000021966)	snrnp27 (ENSDCDG00000021946)	ENSDCDG00000021945	zgc:65851 (ENSDCDG00000021503)	cds2 (ENSDCDG00000019064)	arhgap25 (ENSDCDG00000018981)	bmp10 (ENSDCDG00000018939)	ENSDCDG00000018932	ERLIN2 (ENSDCDG00000018212)	znf703 (ENSDCDG00000018206)	ENSDCDG00000018199	tmem150aa (ENSDCDG00000018194) ##22	rnf181 (ENSDCDG00000018190)	vamp5 (ENSDCDG00000018189)	vamp8 (ENSDCDG00000018186)	ncaph (ENSDCDG00000018170)	TACR1 (ENSDCDG00000018159)	zgc:110329 (ENSDCDG00000018155)	SLC4A5 (ENSDCDG00000018118)	ogfod2 (ENSDCDG00000018109)	zgc:113436 (ENSDCDG00000018105)	abcb9 (ENSDCDG00000018102)	vps37ba (ENSDCDG00000018097)	ppp3cca (ENSDCDG00000017352)	adam28 (ENSDCDG00000017123)	adam28 (ENSDCDG00000014828)	tcima (ENSDCDG00000014728)
Otomorpha	ANCESTRAL SPECIES	84	ENSGT00940000155742.a.a	ENSGT00940000154412.A	ENSGT00390000003837	ENSGT00940000157703	ENSGT00940000175893	ENSGT00390000014940	ENSGT00940000159206.a	ENSGT00940000157199	ENSGT00940000166580	ENSGT00390000011084	ENSGT00940000154938	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT00940000170695
Otophysi	ANCESTRAL SPECIES	14	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT01050000244942.b.a.b.e.b	ENSGT00940000155221.gb	ENSGT00940000155770.b.b	ENSGT00940000154422.d	ENSGT00940000161347.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b	ENSGT00510000047171.y	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT01040000243454	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000154997	ENSGT00940000154585	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003
Characiphysae	ANCESTRAL SPECIES	74	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT01050000244942.b.a.b.e.b	ENSGT00940000155221.gb	ENSGT00940000155770.b.b	ENSGT00940000154422.d	ENSGT00940000161347.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b	ENSGT00510000047171.y	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000154997	ENSGT00940000154585	ENSGT01030000234638.b.b.c.b
Characiphysae_b	ANCESTRAL SPECIES	83	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT00730000110872.a.tb	ENSGT01050000244942.b.a.b.e.b	ENSGT00940000155221.gb	ENSGT00940000155770.b.b	ENSGT00940000154422.d	ENSGT00940000161347.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b	ENSGT00510000047171.y	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000154997	ENSGT00940000154585	ENSGT01030000234638.b.b.c.b
Characoidei	ANCESTRAL SPECIES	39	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT01050000244942.b.a.b.e.b	ENSGT00940000155221.gb	ENSGT00940000155770.b.b	ENSGT00940000154422.d	ENSGT00940000161347.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b	ENSGT00510000047171.y	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT01040000243454	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00510000050587	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000154997	ENSGT00940000154585	ENSGT01030000234638.b.b.c.b
Red-bellied piranha	MODERN SPECIES	591								gna14 (ENSPNAG00000007539)	ENSPNAG00000000285	hnrpkl (ENSPNAG00000007549)	ntrk2b (ENSPNAG00000000301)	kcmf1 (ENSPNAG00000000307)	camk4 (ENSPNAG00000007564)	wdr36 (ENSPNAG00000007572)	slc25a46 (ENSPNAG00000007581)	tmem150ab (ENSPNAG00000000319) ##22	ENSPNAG00000007589	ENSPNAG00000007592	pisd (ENSPNAG00000007597)	ENSPNAG00000007604
Mexicana tetra	MODERN SPECIES	137	ENSAMXG00000043859	ENSAMXG00000043367	srek1 (ENSAMXG00000043877)	TMC2 (ENSAMXG00000006525)	anxa1d (ENSAMXG00000006568)	ENSAMXG00000006586	prune2 (ENSAMXG00000040265)	gna14 (ENSAMXG00000032922)	ENSAMXG00000044117	hnrpkl (ENSAMXG00000006660)	ntrk2b (ENSAMXG00000006667)	kcmf1 (ENSAMXG00000006684)	camk4 (ENSAMXG00000029776)	wdr36 (ENSAMXG00000006706)	slc25a46 (ENSAMXG00000043314)	tmem150ab (ENSAMXG00000006721) ##22	ENSAMXG00000030059	ENSAMXG00000036106	pisd (ENSAMXG00000029074)	ENSAMXG00000037530	rnf224 (ENSAMXG00000006749)	prpf4 (ENSAMXG00000006756)	cdc26 (ENSAMXG00000035508)	slc31a1 (ENSAMXG00000037719)	ENSAMXG00000006768	FER (ENSAMXG00000006775)	pja2 (ENSAMXG00000006782)	man2a1 (ENSAMXG00000006789)	ppm1db (ENSAMXG00000006792)	ENSAMXG00000033996	MYO1H (ENSAMXG00000006824)
Electric eel	MODERN SPECIES	534			srek1 (ENSEEEG00000015184)	ENSEEEG00000015183	TMC2 (ENSEEEG00000015180)	ENSEEEG00000015058	prune2 (ENSEEEG00000015052)	gna14 (ENSEEEG00000015031)	ENSEEEG00000015016	hnrpkl (ENSEEEG00000015014)	ntrk2b (ENSEEEG00000015008)	kcmf1 (ENSEEEG00000015005)	camk4 (ENSEEEG00000014999)	wdr36 (ENSEEEG00000014953)	slc25a46 (ENSEEEG00000014940)	tmem150ab (ENSEEEG00000014939) ##22	ENSEEEG00000014937
Channel catfish	MODERN SPECIES	20	ENSIPUG00000016940	cd180 (ENSIPUG00000016962)	pik3r1 (ENSIPUG00000016974)	TMC2 (ENSIPUG00000017076)	ANXA1 (ENSIPUG00000017123)	ENSIPUG00000017202	prune2 (ENSIPUG00000017515)	gna14 (ENSIPUG00000017542)	Gnaq (ENSIPUG00000017568)	hnrpkl (ENSIPUG00000017608)	ntrk2b (ENSIPUG00000017658)	kcmf1 (ENSIPUG00000017693)	Camk4 (ENSIPUG00000017721)	wdr36 (ENSIPUG00000017751)	slc25a46 (ENSIPUG00000017823)	tmem150ab (ENSIPUG00000017873) ##22	ENSIPUG00000017900	pisd (ENSIPUG00000017919)	ENSIPUG00000017939	rnf224 (ENSIPUG00000017947)	PRPF4 (ENSIPUG00000017956)	cdc26 (ENSIPUG00000017996)	slc31a1 (ENSIPUG00000018007)	ATP6V1G1 (ENSIPUG00000018016)	ENSIPUG00000018037	RCL1 (ENSIPUG00000018054)	gng10 (ENSIPUG00000018116)	dnajc25 (ENSIPUG00000018121)	ythdc1 (ENSIPUG00000018136)	ENSIPUG00000018178	ENSIPUG00000018192
Cyprinoidei	ANCESTRAL SPECIES	37	ENSGT00940000156399	ENSGT00940000167247	ENSGT00730000110872.a.sb	ENSGT01050000244942.b.a.b.e.b	ENSGT00940000155221.gb.c	ENSGT00940000155770.b.b	ENSGT00940000154422.d	ENSGT00940000161347.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b	ENSGT00510000047171.y	ENSGT00940000160006	ENSGT00940000153662.B	ENSGT00390000015874	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT00940000158514	ENSGT00940000161226.b	ENSGT00510000047471	ENSGT00390000018761	ENSGT00940000164085.d.a	ENSGT00390000000288	ENSGT00940000156706.b	ENSGT00940000158439.n	ENSGT00940000155672.h	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT00390000014003	ENSGT01030000234638.b.b.c.b	ENSGT00940000154585	ENSGT00940000154997
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	105	ENSGT00940000155221.gb.c.a.a.b	ENSGT00940000155221.gb.c.b	ENSGT00940000155770.b.b.b	ENSGT00940000154422.d.b	ENSGT00940000161347.a.b.b	ENSGT00940000161347.b.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b	ENSGT00940000155181.c.b.b	ENSGT00510000047171.y.c.a	ENSGT00940000160006.j	ENSGT00510000047171.y.d	ENSGT00940000160006.i	ENSGT00940000153662.B.c	ENSGT00390000015874.o	ENSGT01030000234578.A.b.a.a.b.d.a ##22	ENSGT00940000158514.o	ENSGT00940000161226.b.b
Cyprininae_a	ANCESTRAL SPECIES	220	ENSGT00940000155221.gb.c.a.a.b	ENSGT00940000155221.gb.c.b	ENSGT00940000155770.b.b.b	ENSGT00940000154422.d.b	ENSGT00940000161347.a.b.b	ENSGT00940000161347.b.a.b	ENSGT00940000162569.a	ENSGT00940000153434.c.b.d.a	ENSGT00940000155181.c.b.b	ENSGT00510000047171.y.c.a	ENSGT00940000160006.j	ENSGT00510000047171.y.d	ENSGT00940000160006.i	ENSGT00940000153662.B.c	ENSGT00390000015874.o	ENSGT01030000234578.A.b.a.a.b.d.a ##22	ENSGT00940000158514.o	ENSGT00940000161226.b.b
Common carp reference	MODERN SPECIES	7	ENSCCRG00000077771	srek1 (ENSCCRG00000004679)	ENSCCRG00000039168	ENSCCRG00000039162	ENSCCRG00000039155	ENSCCRG00000038979	prune2 (ENSCCRG00000004527)	gna14 (ENSCCRG00000054427)	gnaq (ENSCCRG00000004747)	hnrpkl (ENSCCRG00000033282)	ntrk2b (ENSCCRG00000064673)	kcmf1 (ENSCCRG00000030143)	camk4 (ENSCCRG00000030088)	wdr36 (ENSCCRG00000038204)	slc25a46 (ENSCCRG00000024443)	tmem150ab (ENSCCRG00000026789) ##22	ENSCCRG00000026787	mks1 (ENSCCRG00000051240)	MRM1 (ENSCCRG00000067198)	lhx1b (ENSCCRG00000051269)	aatf (ENSCCRG00000051261)	acaca (ENSCCRG00000029495)	tbx2a (ENSCCRG00000073342)	ENSCCRG00000078585	ppm1db (ENSCCRG00000011283)	ENSCCRG00000011288	tia1 (ENSCCRG00000011290)	man2a1 (ENSCCRG00000025520)	pja2 (ENSCCRG00000011311)	FER (ENSCCRG00000069376)	FER (ENSCCRG00000031207)
Golden-line barbel	MODERN SPECIES	1759															slc25a46 (ENSSGRG00000027663)	tmem150ab (ENSSGRG00000027664) ##22	ENSSGRG00000027665	FZD9 (ENSSGRG00000027677)
Goldfish	MODERN SPECIES	44	MAST4 (ENSCARG00000027219)	ENSCARG00000027690	srek1 (ENSCARG00000027717)	TMC2 (ENSCARG00000027757)	ENSCARG00000027863	ENSCARG00000028517	prune2 (ENSCARG00000028570)	gna14 (ENSCARG00000028582)	gnaq (ENSCARG00000028586)	hnrpkl (ENSCARG00000028600)	ntrk2b (ENSCARG00000028718)	kcmf1 (ENSCARG00000028738)	camk4 (ENSCARG00000028810)	wdr36 (ENSCARG00000030494)	slc25a46 (ENSCARG00000031873)	tmem150ab (ENSCARG00000031929) ##22	ENSCARG00000031952	FZD9 (ENSCARG00000031965)	ENSCARG00000031974	PAK3 (ENSCARG00000032035)	ENSCARG00000032257	ENSCARG00000032261	ENSCARG00000032270	hip1rb (ENSCARG00000032319)	ENSCARG00000033043	ENSCARG00000033061	PAX8 (ENSCARG00000033084)	ARL3 (ENSCARG00000033157)	ENSCARG00000033166	lman2la (ENSCARG00000033177)	MTFP1 (ENSCARG00000033196)
Cyprininae	ANCESTRAL SPECIES	95	ENSGT00940000154586.fc.b	ENSGT00940000155754.f	ENSGT00940000155553.c	ENSGT00940000161183	ENSGT00940000156399.xb	ENSGT00730000110872.a.sb.b	ENSGT00940000155221.gb.c.a.a.a	ENSGT00940000155770.b.b.a	ENSGT00940000154422.d.a	ENSGT00940000161347.a.b.a	ENSGT00940000161347.b.a.a	ENSGT00940000155181.c.b.a	ENSGT00510000047171.y.c.b	ENSGT00940000153662.B.d	ENSGT00390000015874.p	ENSGT01030000234578.A.b.a.a.b.d.b ##22	ENSGT00940000158514.p	ENSGT00940000161226.b.a	ENSGT00510000047471.h	ENSGT00510000047471.g.b	ENSGT00390000018761.e	ENSGT00940000164085.d.a.a	ENSGT00390000000288.a	ENSGT00940000156706.b.g.a	ENSGT00940000158439.n.b	ENSGT00940000155672.h.a	ENSGT00940000164085.d.a.b	ENSGT00390000000288.b	ENSGT00940000156706.b.g.b	ENSGT00940000158439.n.a	ENSGT00940000155672.h.b
Goldfish	MODERN SPECIES	23	ENSCARG00000025510	srek1 (ENSCARG00000025497)	ENSCARG00000025470	ENSCARG00000025462	ENSCARG00000022289	prune2 (ENSCARG00000022176)	gna14 (ENSCARG00000022171)	gnaq (ENSCARG00000022155)	hnrpkl (ENSCARG00000022099)	ENSCARG00000022087	ntrk2b (ENSCARG00000022071)	kcmf1 (ENSCARG00000022053)	camk4 (ENSCARG00000021951)	wdr36 (ENSCARG00000018073)	slc25a46 (ENSCARG00000017853)	tmem150ab (ENSCARG00000017843) ##22	FKBP6 (ENSCARG00000017836)	FZD9 (ENSCARG00000017828)	mks1 (ENSCARG00000017069)	lhx1b (ENSCARG00000017031)	aatf (ENSCARG00000016994)	acaca (ENSCARG00000009839)	ENSCARG00000009616	tbx2a (ENSCARG00000009604)	ppm1db (ENSCARG00000009590)	tia1 (ENSCARG00000009430)	tmem232 (ENSCARG00000009403)	man2a1 (ENSCARG00000009058)	pja2 (ENSCARG00000009006)	FER (ENSCARG00000008921)	atp6v1g1 (ENSCARG00000008913)
Cyprininae_a	ANCESTRAL SPECIES	172	ENSGT00940000155754.f	ENSGT00940000155553.c	ENSGT00940000161183	ENSGT00940000156399.xb	ENSGT00730000110872.a.sb.b	ENSGT00940000155221.gb.c.a.a.a	ENSGT00940000155770.b.b.a	ENSGT00940000154422.d.a	ENSGT00940000161347.a.b.a	ENSGT00940000161347.b.a.a	ENSGT00940000153434.c.b.d.b	ENSGT00940000155181.c.b.a	ENSGT00510000047171.y.c.b	ENSGT00940000153662.B.d	ENSGT00390000015874.p	ENSGT01030000234578.A.b.a.a.b.d.b ##22	ENSGT00940000158514.p	ENSGT00940000161226.b.a	ENSGT00510000047471.h	ENSGT00510000047471.g.b	ENSGT00390000018761.e	ENSGT00940000164085.d.a.b	ENSGT00390000000288.b	ENSGT00940000156706.b.g.b	ENSGT00940000158439.n.a	ENSGT00940000164085.d.a.a	ENSGT00390000000288.a	ENSGT00940000156706.b.g.a	ENSGT00940000158439.n.b	ENSGT00940000155672.h.a	ENSGT00940000155672.h.b
Common carp reference	MODERN SPECIES	15	ENSCCRG00000052963	srek1 (ENSCCRG00000039226)	ENSCCRG00000079753	ENSCCRG00000004599	ENSCCRG00000004573	prune2 (ENSCCRG00000003226)	ENSCCRG00000063795	gna14 (ENSCCRG00000004512)	hnrpkl (ENSCCRG00000053681)	gnaq (ENSCCRG00000060696)	ntrk2b (ENSCCRG00000053232)	kcmf1 (ENSCCRG00000030557)	camk4 (ENSCCRG00000056547)	wdr36 (ENSCCRG00000063482)	ENSCCRG00000080325	tmem150ab (ENSCCRG00000060715) ##22	ENSCCRG00000051257	ENSCCRG00000051253	mks1 (ENSCCRG00000050982)	ENSCCRG00000048740	lhx1b (ENSCCRG00000073281)	aatf (ENSCCRG00000079638)	acaca (ENSCCRG00000014564)	tbx2a (ENSCCRG00000041678)	ppm1db (ENSCCRG00000079041)	ENSCCRG00000025624	tmem232 (ENSCCRG00000072527)	man2a1 (ENSCCRG00000011304)	pja2 (ENSCCRG00000052352)	FER (ENSCCRG00000011327)	atp6v1g1 (ENSCCRG00000060707)
Golden-line barbel	MODERN SPECIES	286	ENSSGRG00000023198	ENSSGRG00000023191	ENSSGRG00000023190	prune2 (ENSSGRG00000023189)	gna14 (ENSSGRG00000023187)	gnaq (ENSSGRG00000023174)	HNRNPK (ENSSGRG00000023168)	ENSSGRG00000023167	ntrk2b (ENSSGRG00000023165)	ntrk2b (ENSSGRG00000023161)	kcmf1 (ENSSGRG00000023153)	camk4 (ENSSGRG00000023151)	ENSSGRG00000023150	wdr36 (ENSSGRG00000022807)	slc25a46 (ENSSGRG00000022791)	tmem150ab (ENSSGRG00000022790) ##22	FKBP6 (ENSSGRG00000022784)	FZD9 (ENSSGRG00000022783)	mks1 (ENSSGRG00000022730)	ENSSGRG00000022713	lhx1b (ENSSGRG00000022710)	aatf (ENSSGRG00000022708)	acaca (ENSSGRG00000022356)
Zebrafish	MODERN SPECIES	20	slc30a5 (ENSDARG00000051921)	pik3r1 (ENSDARG00000038524)	cd180 (ENSDARG00000093750)	srek1 (ENSDARG00000009764)	tmc2a (ENSDARG00000033104)	ENSDARG00000067537	prune2 (ENSDARG00000059423)	gna14 (ENSDARG00000035178)	gnaq (ENSDARG00000011487)	hnrpkl (ENSDARG00000007034)	ntrk2b (ENSDARG00000098511)	kcmf1 (ENSDARG00000067656)	camk4 (ENSDARG00000005372)	wdr36 (ENSDARG00000004774)	slc25a46 (ENSDARG00000035181)	tmem150ab (ENSDARG00000035184) ##22	ENSDARG00000095188	fkbp6 (ENSDARG00000030133)	FZD9 (ENSDARG00000035185)	mks1 (ENSDARG00000059657)	mrm1 (ENSDARG00000059658)	lhx1b (ENSDARG00000007944)	aatf (ENSDARG00000025467)	acaca (ENSDARG00000078512)	tbx2a (ENSDARG00000018025)	ppm1db (ENSDARG00000021380)	C5H2orf42 (ENSDARG00000059636)	tia1 (ENSDARG00000052536)	tmem232 (ENSDARG00000067646)	man2a1 (ENSDARG00000102200)	ENSDARG00000093179
Clupeiformes	ANCESTRAL SPECIES	3	ENSGT00950000183158.E	ENSGT00940000155742.a.a	ENSGT00940000154412.A	ENSGT00390000003837	ENSGT00940000157703	ENSGT00940000175893	ENSGT00390000014940	ENSGT00940000159206.a	ENSGT00940000157199	ENSGT00390000011084	ENSGT00940000154938	ENSGT00940000156980.a	ENSGT00390000014618.b.c	ENSGT00390000011031	ENSGT00940000154962.A.a.b	ENSGT01030000234578.A.b.a.a.b.d ##22	ENSGT00940000170695	ENSGT00520000055626.a	ENSGT00390000013484	ENSGT00980000198836	ENSGT00940000156006	ENSGT00390000008457	ENSGT00940000155147	ENSGT00940000154399	ENSGT00940000154997	ENSGT00940000154585	ENSGT01030000234638.b.b.c.b	ENSGT00390000014003	ENSGT00390000015874	ENSGT00940000153662.B	ENSGT00940000160006
Denticle herring	MODERN SPECIES	13	slc12a2 (ENSDCDG00000001567)	CTXN3 (ENSDCDG00000001413)	prrc1 (ENSDCDG00000001410)	megf10 (ENSDCDG00000001126)	ENSDCDG00000001064	C5orf63 (ENSDCDG00000001063)	ENSDCDG00000001060	lmnb1 (ENSDCDG00000001041)	ENSDCDG00000001022	phax (ENSDCDG00000001019)	aldh7a1 (ENSDCDG00000000476)	GRAMD2B (ENSDCDG00000000192)	ZNF703 (ENSDCDG00000000175)	C2orf42 (ENSDCDG00000026227)	tia1 (ENSDCDG00000026004)	tmem150ab (ENSDCDG00000025995) ##22	ENSDCDG00000025992	ENSDCDG00000025991	pisd (ENSDCDG00000025988)	ENSDCDG00000025984	prpf4 (ENSDCDG00000024783)	cdc26 (ENSDCDG00000024710)	slc31a1 (ENSDCDG00000024704)	atp6v1g1 (ENSDCDG00000024699)	FER (ENSDCDG00000024587)	pja2 (ENSDCDG00000024582)	man2a1 (ENSDCDG00000023013)	slc25a46 (ENSDCDG00000022979)	wdr36 (ENSDCDG00000022309)	camk4 (ENSDCDG00000022203)	kcmf1 (ENSDCDG00000022187)
Euteleosteomorpha	ANCESTRAL SPECIES	15	ENSGT00940000157631	ENSGT01070000253744.b.a.a.a.b	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	93	ENSGT00940000157631	ENSGT01070000253744.b.a.a.a.b	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000160552	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302.c	ENSGT00940000156716	ENSGT00390000003458	ENSGT00940000156888
Salmoninae	ANCESTRAL SPECIES	37	ENSGT00940000157631.v	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00950000182787.C.m	ENSGT00940000159299.c	ENSGT00730000111237.l	ENSGT00940000159446.e.a	ENSGT00940000165501.e.b	ENSGT00940000158877.c	ENSGT00950000183015.A.i	ENSGT00940000156279.e.f	ENSGT00940000167361.c	ENSGT00390000014666.a.f	ENSGT00390000014618.b.d.c	ENSGT00940000168407	ENSGT00940000154962.A.a.a.c	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000165973	ENSGT00730000111371.i	ENSGT00940000160325.b.s	ENSGT00390000004149.k	ENSGT00940000153232.a.b.b.k	ENSGT00940000153745.a.a.f	ENSGT00940000165233.f	ENSGT00940000157488.g.a	ENSGT00940000153974.B.g	ENSGT00940000164419.e	ENSGT00940000155431.a.c	ENSGT00950000183012.A.a.c.b.c	ENSGT00940000166302.c.a	ENSGT00940000156716.db	ENSGT00390000003458.f
Huchen	MODERN SPECIES	813									arhgap25 (ENSHHUG00000049123)	bmp10 (ENSHHUG00000049127)	ENSHHUG00000049131	ERLIN2 (ENSHHUG00000049136)	znf703 (ENSHHUG00000049210)	ENSHHUG00000049214	ENSHHUG00000049245	TMEM150A (ENSHHUG00000049293) ##22	ENSHHUG00000049299	vamp5 (ENSHHUG00000049304)	vamp8 (ENSHHUG00000049305)	ncaph (ENSHHUG00000049316)	CASP3 (ENSHHUG00000049327)	TACR1 (ENSHHUG00000049334)	zgc:110329 (ENSHHUG00000049356)
Salmoninae_a	ANCESTRAL SPECIES	10	ENSGT01010000223359	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00950000182787.C.m	ENSGT00940000159299.c	ENSGT00730000111237.l	ENSGT00940000159446.e.a	ENSGT00940000165501.e.b	ENSGT00940000158877.c	ENSGT00950000183015.A.i	ENSGT00940000156279.e.f	ENSGT00940000167361.c	ENSGT00390000014666.a.f	ENSGT00390000014618.b.d.c	ENSGT00940000168407	ENSGT00940000154962.A.a.a.c	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000165973	ENSGT00730000111371.i	ENSGT00940000160325.b.s	ENSGT00390000004149.k	ENSGT00940000153232.a.b.b.k	ENSGT00940000153745.a.a.f	ENSGT00940000165233.f	ENSGT00940000157488.g.a	ENSGT00940000153974.B.g	ENSGT00940000164419.e	ENSGT00940000155431.a.c	ENSGT00950000183012.A.a.c.b.c	ENSGT00940000166302.c.a	ENSGT00940000156716.db	ENSGT00390000003458.f
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00940000157631.v	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00950000182787.C.m	ENSGT00940000159299.c	ENSGT00730000111237.l	ENSGT00940000159446.e.a	ENSGT00940000165501.e.b	ENSGT00940000158877.c	ENSGT00950000183015.A.i	ENSGT00940000156279.e.f	ENSGT00940000167361.c	ENSGT00390000014666.a.f	ENSGT00390000014618.b.d.c	ENSGT00940000168407	ENSGT00940000154962.A.a.a.c	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000165973	ENSGT00730000111371.i	ENSGT00940000160325.b.s	ENSGT00390000004149.k	ENSGT00940000153232.a.b.b.k	ENSGT00940000153745.a.a.f	ENSGT00940000165233.f	ENSGT00940000157488.g.a	ENSGT00940000153974.B.g	ENSGT00940000164419.e	ENSGT00940000155431.a.c	ENSGT00950000183012.A.a.c.b.c	ENSGT00940000166302.c.a	ENSGT00940000156716.db	ENSGT00390000003458.f
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT01010000223359	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00950000182787.C.m	ENSGT00940000159299.c	ENSGT00730000111237.l	ENSGT00940000159446.e.a	ENSGT00940000165501.e.b	ENSGT00940000158877.c	ENSGT00950000183015.A.i	ENSGT00940000156279.e.f	ENSGT00940000167361.c	ENSGT00390000014666.a.f	ENSGT00390000014618.b.d.c	ENSGT00940000168407	ENSGT00940000154962.A.a.a.c	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000165973	ENSGT00730000111371.i	ENSGT00940000160325.b.s	ENSGT00390000004149.k	ENSGT00940000153232.a.b.b.k	ENSGT00940000153745.a.a.f	ENSGT00940000165233.f	ENSGT00940000157488.g.a	ENSGT00940000153974.B.g	ENSGT00940000164419.e	ENSGT00940000155431.a.c	ENSGT00950000183012.A.a.c.b.c	ENSGT00940000166302.c.a	ENSGT00940000156716.db	ENSGT00390000003458.f
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	28	ap3m2 (ENSOTSG00005007772)	tet3 (ENSOTSG00005007794)	NPFFR1 (ENSOTSG00005007811)	hk2 (ENSOTSG00005007910)	add2 (ENSOTSG00005011621)	ENSOTSG00005011652	zgc:65851 (ENSOTSG00005011657)	cds2 (ENSOTSG00005011849)	arhgap25 (ENSOTSG00005011924)	bmp10 (ENSOTSG00005011926)	ENSOTSG00005011928	ERLIN2 (ENSOTSG00005011931)	znf703 (ENSOTSG00005011988)	ENSOTSG00005011990	ENSOTSG00005012000	TMEM150A (ENSOTSG00005012388) ##22	ENSOTSG00005012391	vamp5 (ENSOTSG00005012399)	vamp8 (ENSOTSG00005012403)	ncaph (ENSOTSG00005012405)	CASP3 (ENSOTSG00005012418)	TACR1 (ENSOTSG00005012422)	zgc:110329 (ENSOTSG00005012424)	SLC4A5 (ENSOTSG00005012463)	ogfod2 (ENSOTSG00005026766)	ENSOTSG00005026767	zgc:113436 (ENSOTSG00005026768)	abcb9 (ENSOTSG00005026774)	vps37ba (ENSOTSG00005026807)	ppp3cca (ENSOTSG00005026816)	adam28 (ENSOTSG00005031165)
Chinook salmon	MODERN SPECIES	28	gphb5 (ENSOTSG00005034950)	ppp2r5eb (ENSOTSG00005034952)	NPFFR1 (ENSOTSG00005035346)	hk2 (ENSOTSG00005035663)	add2 (ENSOTSG00005041279)	ENSOTSG00005041284	zgc:65851 (ENSOTSG00005041285)	cds2 (ENSOTSG00005041296)	arhgap25 (ENSOTSG00005041444)	bmp10 (ENSOTSG00005041447)	ENSOTSG00005041448	ERLIN2 (ENSOTSG00005041453)	znf703 (ENSOTSG00005041581)	ENSOTSG00005041582	ENSOTSG00005041585	TMEM150A (ENSOTSG00005041802) ##22	ENSOTSG00005041803	vamp5 (ENSOTSG00005041804)	vamp8 (ENSOTSG00005041805)	ncaph (ENSOTSG00005041806)	CASP3 (ENSOTSG00005041807)	TACR1 (ENSOTSG00005041808)	zgc:110329 (ENSOTSG00005041811)	SLC4A5 (ENSOTSG00005041854)	ogfod2 (ENSOTSG00005045672)	ENSOTSG00005045673	zgc:113436 (ENSOTSG00005045674)	abcb9 (ENSOTSG00005045675)	vps37ba (ENSOTSG00005046044)	ppp3cca (ENSOTSG00005046045)	adam28 (ENSOTSG00005046461)
Coho salmon	MODERN SPECIES	22	NPFFR1 (ENSOKIG00005000848)	hk2 (ENSOKIG00005000904)	add2 (ENSOKIG00005001055)	snrnp27 (ENSOKIG00005001078)	ENSOKIG00005001084	zgc:65851 (ENSOKIG00005001093)	cds2 (ENSOKIG00005001211)	arhgap25 (ENSOKIG00005001609)	bmp10 (ENSOKIG00005001614)	ENSOKIG00005001618	ERLIN2 (ENSOKIG00005001649)	znf703 (ENSOKIG00005001686)	ENSOKIG00005001827	ENSOKIG00005003242	ENSOKIG00005003274	TMEM150A (ENSOKIG00005003281) ##22	ENSOKIG00005003293	vamp5 (ENSOKIG00005003303)	vamp8 (ENSOKIG00005003308)	ncaph (ENSOKIG00005003316)	CASP3 (ENSOKIG00005003333)	TACR1 (ENSOKIG00005003358)	ENSOKIG00005003371	zgc:110329 (ENSOKIG00005003375)	SLC4A5 (ENSOKIG00005003631)	ogfod2 (ENSOKIG00005006493)	zgc:113436 (ENSOKIG00005006505)	abcb9 (ENSOKIG00005006573)	vps37ba (ENSOKIG00005007457)	ppp3cca (ENSOKIG00005007503)	adam28 (ENSOKIG00005008179)
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000053575	ENSOMYG00000001572	hk2 (ENSOMYG00000002399)	add2 (ENSOMYG00000002827)	ENSOMYG00000002856	zgc:65851 (ENSOMYG00000002902)	cds2 (ENSOMYG00000003017)	ENSOMYG00000003232	bmp10 (ENSOMYG00000003239)	ENSOMYG00000003264	ENSOMYG00000003952	ENSOMYG00000004339	ENSOMYG00000004755	ENSOMYG00000005547	ENSOMYG00000048705	TMEM150A (ENSOMYG00000005811) ##22	ENSOMYG00000005819	VAMP5 (ENSOMYG00000072485)	vamp8 (ENSOMYG00000064629)	ncaph (ENSOMYG00000006152)	ENSOMYG00000006419	ENSOMYG00000056955	ENSOMYG00000006487	zgc:110329 (ENSOMYG00000006502)	ENSOMYG00000008980	ogfod2 (ENSOMYG00000015943)	zgc:113436 (ENSOMYG00000015948)	abcb9 (ENSOMYG00000015976)	vps37ba (ENSOMYG00000016415)	ppp3cca (ENSOMYG00000016439)	adam28 (ENSOMYG00000016749)
Salmo	ANCESTRAL SPECIES		ENSGT01010000223359	ENSGT01070000253744.b.a.a.a.b.k.a	ENSGT00950000182787.C.m	ENSGT00940000159299.c	ENSGT00730000111237.l	ENSGT00940000159446.e.a	ENSGT00940000165501.e.b	ENSGT00940000158877.c	ENSGT00950000183015.A.i	ENSGT00940000156279.e.f	ENSGT00940000167361.c	ENSGT00390000014666.a.f	ENSGT00390000014618.b.d.c	ENSGT00940000168407	ENSGT00940000154962.A.a.a.c	ENSGT01030000234578.A.b.a.a.b.e ##22	ENSGT00940000176261.a	ENSGT00730000111371.i	ENSGT00940000160325.b.s	ENSGT00390000004149.k	ENSGT00940000153232.a.b.b.k	ENSGT00940000153745.a.a.f	ENSGT00940000165233.f	ENSGT00940000157488.g.a	ENSGT00940000153974.B.g	ENSGT00940000164419.e	ENSGT00940000155431.a.c	ENSGT00950000183012.A.a.c.b.c	ENSGT00940000166302.c.a	ENSGT00940000156716.db	ENSGT00390000003458.f
River trout	MODERN SPECIES	19	ENSSTUG00000026487	NPFFR1 (ENSSTUG00000026378)	hk2 (ENSSTUG00000021812)	add2 (ENSSTUG00000021628)	snrnp27 (ENSSTUG00000021597)	ENSSTUG00000021590	zgc:65851 (ENSSTUG00000021451)	cds2 (ENSSTUG00000021397)	arhgap25 (ENSSTUG00000021382)	bmp10 (ENSSTUG00000021377)	ENSSTUG00000021370	ERLIN2 (ENSSTUG00000020866)	znf703 (ENSSTUG00000020831)	ENSSTUG00000020590	TIA1 (ENSSTUG00000020267)	TMEM150A (ENSSTUG00000020241) ##22	ENSSTUG00000020229	vamp5 (ENSSTUG00000020218)	vamp8 (ENSSTUG00000020200)	ncaph (ENSSTUG00000020156)	CASP3 (ENSSTUG00000020090)	TACR1 (ENSSTUG00000020015)	zgc:110329 (ENSSTUG00000019996)	ENSSTUG00000019993	SLC4A5 (ENSSTUG00000017536)	ogfod2 (ENSSTUG00000017455)	zgc:113436 (ENSSTUG00000017444)	abcb9 (ENSSTUG00000017190)	vps37ba (ENSSTUG00000017161)	ppp3cca (ENSSTUG00000016692)	adam28 (ENSSTUG00000015402)
Atlantic salmon	MODERN SPECIES	16	ap3m2 (ENSSSAG00000115977)	tet3 (ENSSSAG00000080979)	ENSSSAG00000089549	hk2 (ENSSSAG00000080458)	add2 (ENSSSAG00000080372)	ENSSSAG00000085309	zgc:65851 (ENSSSAG00000080297)	ENSSSAG00000080241	ENSSSAG00000112711	ENSSSAG00000080234	ENSSSAG00000080206	ENSSSAG00000080198	ENSSSAG00000077598	ENSSSAG00000080188	ENSSSAG00000112716	TMEM150A (ENSSSAG00000097704) ##22	ENSSSAG00000080131	vamp5 (ENSSSAG00000095593)	vamp8 (ENSSSAG00000080123)	ncaph (ENSSSAG00000080102)	casp3 (ENSSSAG00000080096)	ENSSSAG00000080087	ENSSSAG00000080086	ENSSSAG00000078543	ogfod2 (ENSSSAG00000078461)	zgc:113436 (ENSSSAG00000092467)	abcb9 (ENSSSAG00000080327)	vps37ba (ENSSSAG00000089977)	ppp3cca (ENSSSAG00000075817)	adam28 (ENSSSAG00000074523)	tcima (ENSSSAG00000093836)
Northern pike	MODERN SPECIES	12	NPFFR1 (ENSELUG00000006131)	hk2 (ENSELUG00000005968)	figla (ENSELUG00000005936)	add2 (ENSELUG00000005908)	snrnp27 (ENSELUG00000005829)	ENSELUG00000005790	zgc:65851 (ENSELUG00000005774)	cds2 (ENSELUG00000005751)	arhgap25 (ENSELUG00000005727)	bmp10 (ENSELUG00000005713)	ENSELUG00000005705	ERLIN2 (ENSELUG00000005699)	znf703 (ENSELUG00000005672)	ENSELUG00000005662	TIA1 (ENSELUG00000005615)	tmem150aa (ENSELUG00000005596) ##22	rnf181 (ENSELUG00000005580)	vamp5 (ENSELUG00000030017)	vamp8 (ENSELUG00000005553)	ncaph (ENSELUG00000005541)	CASP3 (ENSELUG00000005491)	TACR1 (ENSELUG00000005414)	zgc:110329 (ENSELUG00000005403)	SLC4A5 (ENSELUG00000005363)	ogfod2 (ENSELUG00000005305)	zgc:113436 (ENSELUG00000005292)	abcb9 (ENSELUG00000005281)	vps37ba (ENSELUG00000005261)	adam28 (ENSELUG00000005155)	ppp3cca (ENSELUG00000005227)	ZMAT4 (ENSELUG00000005097)
Protacanthopterygii	ANCESTRAL SPECIES	455																ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000176261
Salmoninae	ANCESTRAL SPECIES	188	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00950000182787.C.n	ENSGT00440000033552	ENSGT00940000159299.d.a.a	ENSGT00730000111237.k	ENSGT00940000159446.e.b	ENSGT00940000165501.e.a	ENSGT00940000158877.d	ENSGT00950000183015.A.j	ENSGT00940000156279.e.e	ENSGT00940000167361.d	ENSGT00390000014666.a.e	ENSGT00390000014618.b.d.d	ENSGT00940000154962.A.a.a.d	ENSGT00530000063586.a.p	ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000160552	ENSGT00730000111371.j	ENSGT00940000160325.b.t	ENSGT00390000004149.l	ENSGT00940000153745.a.a.e	ENSGT00940000165233.e	ENSGT00940000157488.g.b	ENSGT00940000153974.B.h	ENSGT00940000164419.f	ENSGT00940000155431.a.d	ENSGT00950000183012.A.a.c.b.d	ENSGT00940000166302.c.b	ENSGT00940000156716.eb	ENSGT00390000003458.e	ENSGT00940000156888.f
Salmoninae_a	ANCESTRAL SPECIES	31	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00950000182787.C.n	ENSGT00440000033552	ENSGT00940000159299.d.a.a	ENSGT00730000111237.k	ENSGT00940000159446.e.b	ENSGT00940000165501.e.a	ENSGT00940000158877.d	ENSGT00950000183015.A.j	ENSGT00940000156279.e.e	ENSGT00940000167361.d	ENSGT00390000014666.a.e	ENSGT00390000014618.b.d.d	ENSGT00940000154962.A.a.a.d	ENSGT00530000063586.a.p	ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000160552	ENSGT00730000111371.j	ENSGT00940000160325.b.t	ENSGT00390000004149.l	ENSGT00940000153745.a.a.e	ENSGT00940000165233.e	ENSGT00940000157488.g.b	ENSGT00940000153974.B.h	ENSGT00940000164419.f	ENSGT00940000155431.a.d	ENSGT00950000183012.A.a.c.b.d	ENSGT00940000166302.c.b	ENSGT00940000156716.eb	ENSGT00390000003458.e	ENSGT00940000156888.f
Oncorhynchus	ANCESTRAL SPECIES	12	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00950000182787.C.n	ENSGT00440000033552	ENSGT00940000159299.d.a.a	ENSGT00730000111237.k	ENSGT00940000159446.e.b	ENSGT00940000165501.e.a	ENSGT00940000158877.d.a	ENSGT00950000183015.A.j	ENSGT00940000156279.e.e	ENSGT00940000167361.d	ENSGT00390000014666.a.e	ENSGT00390000014618.b.d.d	ENSGT00940000154962.A.a.a.d	ENSGT00530000063586.a.p	ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000160552	ENSGT00730000111371.j	ENSGT00940000160325.b.t	ENSGT00390000004149.l	ENSGT00940000153745.a.a.e	ENSGT00940000165233.e	ENSGT00940000157488.g.b	ENSGT00940000153974.B.h	ENSGT00940000164419.f	ENSGT00940000155431.a.d	ENSGT00950000183012.A.a.c.b.d	ENSGT00940000166302.c.b	ENSGT00940000156716.eb	ENSGT00390000003458.e	ENSGT00940000156888.f
Rainbow trout	MODERN SPECIES	2	figla (ENSOMYG00000037836)	add2 (ENSOMYG00000037852)	snrnp27 (ENSOMYG00000057774)	ENSOMYG00000037865	ENSOMYG00000076338	zgc:65851 (ENSOMYG00000037871)	cds2 (ENSOMYG00000037924)	ENSOMYG00000037974	bmp10 (ENSOMYG00000053126)	ENSOMYG00000037983	ENSOMYG00000038096	ENSOMYG00000038151	ENSOMYG00000067945	ENSOMYG00000038185	ENSOMYG00000038207	TMEM150A (ENSOMYG00000038222) ##22	ENSOMYG00000038232	vamp5 (ENSOMYG00000038253)	vamp8 (ENSOMYG00000050611)	ncaph (ENSOMYG00000038307)	ENSOMYG00000038381	zgc:110329 (ENSOMYG00000038416)	ENSOMYG00000062615	ENSOMYG00000038760	ogfod2 (ENSOMYG00000039105)	zgc:113436 (ENSOMYG00000039121)	abcb9 (ENSOMYG00000039149)	vps37ba (ENSOMYG00000039185)	ENSOMYG00000072942	ENSOMYG00000053106	ppp3cca (ENSOMYG00000039597)
Oncorhynchus_a	ANCESTRAL SPECIES	15	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00950000182787.C.n	ENSGT00440000033552	ENSGT00940000159299.d.a.a	ENSGT00730000111237.k	ENSGT00940000159446.e.b	ENSGT00940000165501.e.a	ENSGT00940000158877.d.a	ENSGT00950000183015.A.j	ENSGT00940000156279.e.e	ENSGT00940000167361.d	ENSGT00390000014666.a.e	ENSGT00390000014618.b.d.d	ENSGT00940000154962.A.a.a.d	ENSGT00530000063586.a.p	ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000160552	ENSGT00730000111371.j	ENSGT00940000160325.b.t	ENSGT00390000004149.l	ENSGT00940000153745.a.a.e	ENSGT00940000165233.e	ENSGT00940000157488.g.b	ENSGT00940000153974.B.h	ENSGT00940000164419.f	ENSGT00940000155431.a.d	ENSGT00950000183012.A.a.c.b.d	ENSGT00940000166302.c.b	ENSGT00940000156716.eb	ENSGT00390000003458.e	ENSGT00940000156888.f
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	4	NPFFR1 (ENSOTSG00005001678)	hk2 (ENSOTSG00005045447)	figla (ENSOTSG00005045444)	add2 (ENSOTSG00005045442)	ENSOTSG00005045441	MXD1 (ENSOTSG00005045439)	zgc:65851 (ENSOTSG00005045437)	cds2 (ENSOTSG00005045236)	arhgap25 (ENSOTSG00005045232)	bmp10 (ENSOTSG00005045225)	ENSOTSG00005045223	ERLIN2 (ENSOTSG00005045178)	znf703 (ENSOTSG00005045173)	TIA1 (ENSOTSG00005045171)	ENSOTSG00005045167	TMEM150A (ENSOTSG00005045163) ##22	rnf181 (ENSOTSG00005045161)	vamp5 (ENSOTSG00005045160)	vamp8 (ENSOTSG00005045158)	ncaph (ENSOTSG00005045156)	TACR1 (ENSOTSG00005045155)	zgc:110329 (ENSOTSG00005045154)	SLC4A5 (ENSOTSG00005045153)	ogfod2 (ENSOTSG00005045152)	zgc:113436 (ENSOTSG00005045151)	abcb9 (ENSOTSG00005045149)	vps37ba (ENSOTSG00005045148)	ppp3cca (ENSOTSG00005041341)	adam28 (ENSOTSG00005041281)	tcima (ENSOTSG00005041277)	ZMAT4 (ENSOTSG00005041276)
Chinook salmon	MODERN SPECIES	3	NPFFR1 (ENSOTSG00005045722)	hk2 (ENSOTSG00005045715)	figla (ENSOTSG00005045712)	add2 (ENSOTSG00005045711)	ENSOTSG00005045710	MXD1 (ENSOTSG00005045708)	zgc:65851 (ENSOTSG00005045707)	cds2 (ENSOTSG00005045658)	arhgap25 (ENSOTSG00005045656)	bmp10 (ENSOTSG00005045654)	ENSOTSG00005045653	ERLIN2 (ENSOTSG00005045143)	znf703 (ENSOTSG00005045140)	ENSOTSG00005045139	ENSOTSG00005045138	TMEM150A (ENSOTSG00005045137) ##22	rnf181 (ENSOTSG00005045136)	vamp5 (ENSOTSG00005045135)	vamp8 (ENSOTSG00005045134)	ncaph (ENSOTSG00005045133)	TACR1 (ENSOTSG00005045132)	zgc:110329 (ENSOTSG00005045131)	SLC4A5 (ENSOTSG00005045130)	ogfod2 (ENSOTSG00005045129)	zgc:113436 (ENSOTSG00005045128)	abcb9 (ENSOTSG00005045127)	vps37ba (ENSOTSG00005045126)	ppp3cca (ENSOTSG00005041207)	adam28 (ENSOTSG00005041117)	tcima (ENSOTSG00005041116)	ZMAT4 (ENSOTSG00005041114)
Coho salmon	MODERN SPECIES	28	hk2 (ENSOKIG00005007724)	figla (ENSOKIG00005007699)	add2 (ENSOKIG00005007650)	snrnp27 (ENSOKIG00005007628)	MXD1 (ENSOKIG00005007622)	zgc:65851 (ENSOKIG00005007615)	CDS2 (ENSOKIG00005006616)	ENSOKIG00005006533	ENSOKIG00005006527	ERLIN2 (ENSOKIG00005004865)	ZNF703 (ENSOKIG00005004771)	ENSOKIG00005004765	ENSOKIG00005004758	ENSOKIG00005004672	ENSOKIG00005004609	TMEM150A (ENSOKIG00005004594) ##22	rnf181 (ENSOKIG00005004584)	vamp5 (ENSOKIG00005004566)	vamp8 (ENSOKIG00005004529)	ncaph (ENSOKIG00005004492)	ENSOKIG00005004478	TACR1 (ENSOKIG00005004460)	zgc:110329 (ENSOKIG00005004434)	SLC4A5 (ENSOKIG00005003582)	zgc:113436 (ENSOKIG00005003408)	abcb9 (ENSOKIG00005003311)	vps37ba (ENSOKIG00005003297)	ppp3cca (ENSOKIG00005003172)	adam28 (ENSOKIG00005002748)	tcima (ENSOKIG00005002685)	ZMAT4 (ENSOKIG00005002679)
Salmo	ANCESTRAL SPECIES	19	ENSGT01070000253744.b.a.a.a.b.k.b	ENSGT00950000182787.C.n	ENSGT00440000033552	ENSGT00940000159299.d.b	ENSGT00730000111237.k	ENSGT00940000159446.e.b	ENSGT00940000165501.e.a	ENSGT00940000158877.d	ENSGT00950000183015.A.j	ENSGT00940000156279.e.e	ENSGT00940000167361.d	ENSGT00390000014666.a.e	ENSGT00390000014618.b.d.d	ENSGT00940000154962.A.a.a.d	ENSGT00530000063586.a.p	ENSGT01030000234578.A.b.a.a.b.f ##22	ENSGT00940000160552	ENSGT00730000111371.j	ENSGT00940000160325.b.t	ENSGT00390000004149.l	ENSGT00940000153745.a.a.e	ENSGT00940000165233.e	ENSGT00940000157488.g.b	ENSGT00940000153974.B.h	ENSGT00940000164419.f	ENSGT00940000155431.a.d	ENSGT00950000183012.A.a.c.b.d	ENSGT00940000166302.c.b	ENSGT00940000156716.eb	ENSGT00390000003458.e	ENSGT00940000156888.f
Atlantic salmon	MODERN SPECIES	12	hk2 (ENSSSAG00000073421)	ENSSSAG00000114780	ENSSSAG00000077014	add2 (ENSSSAG00000077022)	snrnp27 (ENSSSAG00000077570)	ENSSSAG00000077583	zgc:65851 (ENSSSAG00000077586)	cds2 (ENSSSAG00000088151)	ENSSSAG00000120195	bmp10 (ENSSSAG00000117571)	ENSSSAG00000077701	ENSSSAG00000077719	ENSSSAG00000077952	ENSSSAG00000086184	ENSSSAG00000078193	ENSSSAG00000078199 ##22	ENSSSAG00000110182	vamp5 (ENSSSAG00000118814)	ncaph (ENSSSAG00000078210)	ENSSSAG00000078236	zgc:110329 (ENSSSAG00000082042)	ENSSSAG00000078472	ogfod2 (ENSSSAG00000110152)	zgc:113436 (ENSSSAG00000092067)	abcb9 (ENSSSAG00000078384)	vp37b (ENSSSAG00000084172)	ppp3cca (ENSSSAG00000080349)	ENSSSAG00000109903	ENSSSAG00000108559	adam28 (ENSSSAG00000080414)	tcima (ENSSSAG00000106467)
River trout	MODERN SPECIES	39	tet3 (ENSSTUG00000050463)	NPFFR1 (ENSSTUG00000050481)	hk2 (ENSSTUG00000050570)	figla (ENSSTUG00000050798)	add2 (ENSSTUG00000050817)	snrnp27 (ENSSTUG00000001175)	MXD1 (ENSSTUG00000001183)	zgc:65851 (ENSSTUG00000001190)	cds2 (ENSSTUG00000001218)	bmp10 (ENSSTUG00000001478)	ENSSTUG00000001482	ERLIN2 (ENSSTUG00000001492)	znf703 (ENSSTUG00000001542)	ENSSTUG00000001554	ENSSTUG00000001579	TMEM150A (ENSSTUG00000001589) ##22	rnf181 (ENSSTUG00000001593)	vamp5 (ENSSTUG00000001595)	vamp8 (ENSSTUG00000001597)	ncaph (ENSSTUG00000001600)	TACR1 (ENSSTUG00000001614)	zgc:110329 (ENSSTUG00000001627)	SLC4A5 (ENSSTUG00000001637)	zgc:113436 (ENSSTUG00000001655)	abcb9 (ENSSTUG00000001665)	vps37ba (ENSSTUG00000001734)	ppp3cca (ENSSTUG00000001771)	adam28 (ENSSTUG00000002143)	tcima (ENSSTUG00000002543)	ZMAT4 (ENSSTUG00000002546)	sfrp1a (ENSSTUG00000002554)
Huchen	MODERN SPECIES	615														ENSHHUG00000033015	ENSHHUG00000033026	TMEM150A (ENSHHUG00000033032) ##22	rnf181 (ENSHHUG00000033109)	vamp5 (ENSHHUG00000033111)	vamp8 (ENSHHUG00000033115)	ncaph (ENSHHUG00000033123)	TACR1 (ENSHHUG00000033138)	zgc:110329 (ENSHHUG00000033163)	SLC4A5 (ENSHHUG00000033218)	ogfod2 (ENSHHUG00000035444)	zgc:113436 (ENSHHUG00000035449)	abcb9 (ENSHHUG00000035454)	vps37ba (ENSHHUG00000035557)	ppp3cca (ENSHHUG00000035566)	adam28 (ENSHHUG00000035749)	tcima (ENSHHUG00000035807)	ZMAT4 (ENSHHUG00000035808)
Acanthomorphata	ANCESTRAL SPECIES	46	ENSGT00940000157631	ENSGT01070000253744.b.a.a.a.b	ENSGT00950000182787.C	ENSGT00440000033552	ENSGT00940000159299	ENSGT00730000111237	ENSGT00940000159446	ENSGT00940000165501	ENSGT00940000158877	ENSGT00950000183015.A	ENSGT00940000156279.e	ENSGT00940000167361	ENSGT00390000014666.a	ENSGT00390000014618.b.d	ENSGT00940000154962.A.a.a	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000165973	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458
Cod	MODERN SPECIES	2	ube3b (ENSGMOG00000011984)	mmab (ENSGMOG00000037249)	mvk (ENSGMOG00000011981)	rgmb (ENSGMOG00000029528)	erap2 (ENSGMOG00000016556)	lnpep (ENSGMOG00000016581)	slc14a2 (ENSGMOG00000014019)	ENSGMOG00000023582	ENSGMOG00000000425	cds2 (ENSGMOG00000002776)	ENSGMOG00000006611	bmp10 (ENSGMOG00000024803)	ENSGMOG00000006629	ENSGMOG00000001245	ENSGMOG00000008843	TMEM150A (ENSGMOG00000016838) ##22	ENSGMOG00000024162	ENSGMOG00000033670	ENSGMOG00000030064	ENSGMOG00000019227	vamp8 (ENSGMOG00000017292)	ncaph (ENSGMOG00000014171)	ENSGMOG00000016561	zgc:110329 (ENSGMOG00000013280)	ENSGMOG00000008159	ogfod2 (ENSGMOG00000008166)	zgc:113436 (ENSGMOG00000008167)	abcb9 (ENSGMOG00000014194)	vps37ba (ENSGMOG00000025735)	ppp3cca (ENSGMOG00000019285)	adam28 (ENSGMOG00000004307)
Euacanthomorphacea	ANCESTRAL SPECIES	22	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000165973	ENSGT00730000111371	ENSGT00940000160325.b	ENSGT00390000004149	ENSGT00940000153745.a.a	ENSGT00940000165233	ENSGT00940000157488.g	ENSGT00940000153974.B	ENSGT00940000164419	ENSGT00940000155431.a	ENSGT00950000183012.A.a.c.b	ENSGT00940000166302	ENSGT00940000156716	ENSGT00390000003458
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Tiger tail seahorse	MODERN SPECIES	89	ANTXR1 (ENSHCOG00000011213)	gfpt1 (ENSHCOG00000011267)	nfu1 (ENSHCOG00000011290)	zgc:103692 (ENSHCOG00000011312)	med22 (ENSHCOG00000011324)	AAK1 (ENSHCOG00000011393)	adrb3a (ENSHCOG00000011414)	prlhr2a (ENSHCOG00000011441)	ENSHCOG00000011457	ENSHCOG00000011462	adgra2 (ENSHCOG00000011567)	IDUA (ENSHCOG00000011604)	rbp4l (ENSHCOG00000011618)	ENSHCOG00000011632	kcnv2b (ENSHCOG00000011646)	tmem150aa (ENSHCOG00000011662) ##22	rnf181 (ENSHCOG00000011682)	ENSHCOG00000011724	ctu1 (ENSHCOG00000011735)	crybb2 (ENSHCOG00000011739)	CRYBB3 (ENSHCOG00000011781)	ENSHCOG00000011792	rnf10 (ENSHCOG00000011802)	pop5 (ENSHCOG00000011809)	unc119.1 (ENSHCOG00000011823)	ENSHCOG00000011858	hnf1a (ENSHCOG00000011870)	msi1b (ENSHCOG00000012067)	prkab1b (ENSHCOG00000012122)	ENSHCOG00000012094	ENSHCOG00000012138
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT01080000258273	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000154885.A.e.b
Atherinomorphae	ANCESTRAL SPECIES	1	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Oryzias	ANCESTRAL SPECIES	7	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Oryzias_b	ANCESTRAL SPECIES	6	ENSGT00980000199539	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Javanese ricefish	MODERN SPECIES	23	ranbp1 (ENSOJAG00000023696)	zdhhc8b (ENSOJAG00000023689)	pgam5 (ENSOJAG00000023684)	ankle2 (ENSOJAG00000023682)	golga3 (ENSOJAG00000023647)	chfr (ENSOJAG00000023626)	ENSOJAG00000023616	ENSOJAG00000023596	GALNT9 (ENSOJAG00000023554)	atad1a (ENSOJAG00000023543)	ENSOJAG00000023522	piwil2 (ENSOJAG00000022850)	IDUA (ENSOJAG00000022409)	KCNV2 (ENSOJAG00000022398)	ENSOJAG00000022394	tmem150aa (ENSOJAG00000022385) ##22	rnf181 (ENSOJAG00000022374)	ENSOJAG00000022371	PXN (ENSOJAG00000022346)	crybb2 (ENSOJAG00000022334)	CRYBB3 (ENSOJAG00000022304)	ENSOJAG00000022283	rnf10 (ENSOJAG00000022251)	pop5 (ENSOJAG00000022245)	unc119.1 (ENSOJAG00000022233)	zgc:162025 (ENSOJAG00000022222)	hnf1a (ENSOJAG00000022111)	msi1b (ENSOJAG00000021994)	prkab1b (ENSOJAG00000021960)	ENSOJAG00000021954	asgrl1 (ENSOJAG00000021925)
Indian medaka	MODERN SPECIES	11	pgam5 (ENSOMEG00000019004)	ankle2 (ENSOMEG00000018985)	golga3 (ENSOMEG00000018936)	chfr (ENSOMEG00000018886)	FBRSL1 (ENSOMEG00000018810)	ENSOMEG00000018618	ENSOMEG00000018601	GALNT9 (ENSOMEG00000018576)	atad1a (ENSOMEG00000018502)	ENSOMEG00000018468	piwil2 (ENSOMEG00000018436)	tnksb (ENSOMEG00000018326)	IDUA (ENSOMEG00000018115)	ENSOMEG00000018082	kcnv2b (ENSOMEG00000018065)	tmem150aa (ENSOMEG00000018042) ##22	rnf181 (ENSOMEG00000017985)	ENSOMEG00000017955	ctu1 (ENSOMEG00000017921)	crybb2 (ENSOMEG00000000451)	CRYBB3 (ENSOMEG00000017866)	ENSOMEG00000017825	rnf10 (ENSOMEG00000017788)	unc119.1 (ENSOMEG00000017712)	pop5 (ENSOMEG00000017643)	zgc:162025 (ENSOMEG00000017584)	hnf1a (ENSOMEG00000017611)	msi1b (ENSOMEG00000017536)	prkab1b (ENSOMEG00000017445)	ENSOMEG00000017405	asgrl1 (ENSOMEG00000017352)
Oryzias_a	ANCESTRAL SPECIES	3	ENSGT00530000063723.a	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000165280.a.a	ENSGT00390000007349.b
Japanese Medaka HdrR	MODERN SPECIES	23	ankle2 (ENSORLG00000015038)	golga3 (ENSORLG00000015012)	chfr (ENSORLG00000014995)	ENSORLG00000028265	ENSORLG00000028188	ENSORLG00000022168	GALNT9 (ENSORLG00000025508)	atad1a (ENSORLG00000014942)	ENSORLG00000025095	ENSORLG00000028420	ENSORLG00000014894	tnksb (ENSORLG00000029690)	IDUA (ENSORLG00000021913)	ENSORLG00000020520	kcnv2b (ENSORLG00000014890)	tmem150aa (ENSORLG00000014883) ##22	rnf181 (ENSORLG00000014874)	ENSORLG00000014858	ctu1 (ENSORLG00000014831)	crybb2 (ENSORLG00000014827)	CRYBB3 (ENSORLG00000014815)	ENSORLG00000024909	rnf10 (ENSORLG00000014788)	pop5 (ENSORLG00000014745)	unc119.1 (ENSORLG00000014735)	ENSORLG00000014721	hnf1a (ENSORLG00000018971)	msi1b (ENSORLG00000019978)	prkab1b (ENSORLG00000014704)	cox6a1 (ENSORLG00000030031)	hps4 (ENSORLG00000014662)
Chinese medaka	MODERN SPECIES	1161															kcnv2b (ENSOSIG00000003274)	tmem150aa (ENSOSIG00000003268) ##22	ENSOSIG00000003252	ENSOSIG00000003243	ENSOSIG00000001171	ENSOSIG00000001163	ctu1 (ENSOSIG00000001162)	crybb2 (ENSOSIG00000001160)	CRYBB3 (ENSOSIG00000001159)	ENSOSIG00000001158	ENSOSIG00000001154	rnf10 (ENSOSIG00000001139)	pop5 (ENSOSIG00000001125)	unc119.1 (ENSOSIG00000001040)	ENSOSIG00000001034	hnf1a (ENSOSIG00000001032)	msi1b (ENSOSIG00000000947)
Cyprinodontiformes	ANCESTRAL SPECIES	1	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Aplocheiloidei	ANCESTRAL SPECIES	20	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT01080000258273	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Mangrove rivulus	MODERN SPECIES	30	ENSKMAG00000009272	pgam5 (ENSKMAG00000009287)	ankle2 (ENSKMAG00000009309)	golga3 (ENSKMAG00000009360)	chfr (ENSKMAG00000009479)	FBRSL1 (ENSKMAG00000009499)	GALNT9 (ENSKMAG00000009543)	atad1a (ENSKMAG00000009590)	ENSKMAG00000009634	ENSKMAG00000009659	piwil2 (ENSKMAG00000009865)	tnksb (ENSKMAG00000010617)	IDUA (ENSKMAG00000010797)	atp5meb (ENSKMAG00000010828)	kcnv2b (ENSKMAG00000010845)	tmem150aa (ENSKMAG00000010857) ##22	rnf181 (ENSKMAG00000010886)	PXN (ENSKMAG00000010928)	ctu1 (ENSKMAG00000010991)	crybb2 (ENSKMAG00000011015)	CRYBB3 (ENSKMAG00000011048)	ENSKMAG00000011065	rnf10 (ENSKMAG00000011102)	ENSKMAG00000011158	unc119.1 (ENSKMAG00000011183)	hnf1a (ENSKMAG00000011209)	ENSKMAG00000011227	msi1b (ENSKMAG00000011251)	prkab1b (ENSKMAG00000011297)	ENSKMAG00000011333	ENSKMAG00000011345
Turquoise killifish	MODERN SPECIES	1627	ANKLE2 (ENSNFUG00015006277)	golga3 (ENSNFUG00015006369)	chfr (ENSNFUG00015007062)	FBRSL1 (ENSNFUG00015007151)	ENSNFUG00015007260	ENSNFUG00015007266	ENSNFUG00015007269	GALNT9 (ENSNFUG00015007281)	ENSNFUG00015007291	atad1a (ENSNFUG00015007294)	Nfu_g_1_009090 (ENSNFUG00015007302)	tnksb (ENSNFUG00015007323)	IDUA (ENSNFUG00015007431)	ENSNFUG00015007669	kcnv2b (ENSNFUG00015007673)	TMEM150A (ENSNFUG00015007676) ##22	rnf181 (ENSNFUG00015007684)	PXN (ENSNFUG00015007699)	ctu1 (ENSNFUG00015007725)	CRYBB2 (ENSNFUG00015007729)	CRYBB3 (ENSNFUG00015007736)	KIAA1671 (ENSNFUG00015007745)	rnf10 (ENSNFUG00015007751)	ENSNFUG00015007758	UNC119.1 (ENSNFUG00015007771)	zgc:162025 (ENSNFUG00015007777)	hnf1a (ENSNFUG00015007782)	MSI1 (ENSNFUG00015007810)	prkab1b (ENSNFUG00015007866)	ENSNFUG00015007871	COX6A1 (ENSNFUG00015007878)
Cyprinodontoidei	ANCESTRAL SPECIES	1	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.e.b	ENSGT00940000154885.B.e.a
Poeciliinae	ANCESTRAL SPECIES	5	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.e.b	ENSGT00940000154885.B.e.a
Poecilia	ANCESTRAL SPECIES	3	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.e.b	ENSGT00940000154885.B.e.a
NAME_6	ANCESTRAL SPECIES	9	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.e.b	ENSGT00940000154885.B.e.a
Sailfin molly	MODERN SPECIES	8								atad1a (ENSPLAG00000014591)	ENSPLAG00000014537	piwil2 (ENSPLAG00000014526)	tnksb (ENSPLAG00000014512)	IDUA (ENSPLAG00000014446)	rbp4l (ENSPLAG00000014357)	ENSPLAG00000000333	kcnv2b (ENSPLAG00000014274)	tmem150aa (ENSPLAG00000014248) ##22	rnf181 (ENSPLAG00000014214)	PXN (ENSPLAG00000014203)	ctu1 (ENSPLAG00000014198)	crybb2 (ENSPLAG00000014195)	CRYBB3 (ENSPLAG00000014144)	ENSPLAG00000014131	rnf10 (ENSPLAG00000000329)	pop5 (ENSPLAG00000014070)	unc119.1 (ENSPLAG00000014049)	zgc:162025 (ENSPLAG00000014037)	hnf1a (ENSPLAG00000014034)	msi1b (ENSPLAG00000014025)	prkab1b (ENSPLAG00000013989)	ENSPLAG00000013964	asgrl1 (ENSPLAG00000013820)
Amazon molly	MODERN SPECIES	333	zdhhc8b (ENSPFOG00000011059)	pgam5 (ENSPFOG00000011166)	ankle2 (ENSPFOG00000011216)	golga3 (ENSPFOG00000011295)	ENSPFOG00000011465	chfr (ENSPFOG00000011481)	FBRSL1 (ENSPFOG00000011627)	GALNT9 (ENSPFOG00000011780)	atad1a (ENSPFOG00000012028)	ENSPFOG00000012093	piwil2 (ENSPFOG00000012110)	tnksb (ENSPFOG00000012237)	IDUA (ENSPFOG00000012454)	rbp4l (ENSPFOG00000012603)	kcnv2b (ENSPFOG00000012639)	tmem150aa (ENSPFOG00000012647) ##22	rnf181 (ENSPFOG00000012689)	PXN (ENSPFOG00000012728)	ctu1 (ENSPFOG00000012786)	crybb2 (ENSPFOG00000012793)	CRYBB3 (ENSPFOG00000022020)	ENSPFOG00000012833	rnf10 (ENSPFOG00000012846)	pop5 (ENSPFOG00000013000)	unc119.1 (ENSPFOG00000013023)	unc119.1 (ENSPFOG00000013025)	zgc:162025 (ENSPFOG00000023492)	hnf1a (ENSPFOG00000013053)	msi1b (ENSPFOG00000013113)	prkab1b (ENSPFOG00000013259)	ENSPFOG00000013300
Guppy	MODERN SPECIES	461	pgam5 (ENSPREG00000019141)	ankle2 (ENSPREG00000019167)	golga3 (ENSPREG00000019188)	chfr (ENSPREG00000019246)	FBRSL1 (ENSPREG00000019349)	GALNT9 (ENSPREG00000019615)	atad1a (ENSPREG00000019659)	ENSPREG00000019681	piwil2 (ENSPREG00000019700)	ENSPREG00000019721	tnksb (ENSPREG00000019745)	IDUA (ENSPREG00000019874)	rbp4l (ENSPREG00000019933)	ENSPREG00000019984	kcnv2b (ENSPREG00000019994)	tmem150aa (ENSPREG00000020010) ##22	rnf181 (ENSPREG00000020024)	ENSPREG00000020050	ctu1 (ENSPREG00000020068)	crybb2 (ENSPREG00000020083)	CRYBB3 (ENSPREG00000020096)	ENSPREG00000020110	rnf10 (ENSPREG00000020128)	pop5 (ENSPREG00000020151)	unc119.1 (ENSPREG00000020176)	hnf1a (ENSPREG00000020206)	ENSPREG00000020256	msi1a (ENSPREG00000020265)	prkab1b (ENSPREG00000020279)	ENSPREG00000020300	ENSPREG00000020320
Platyfish	MODERN SPECIES	3	ankle2 (ENSXMAG00000002465)	golga3 (ENSXMAG00000002470)	chfr (ENSXMAG00000002473)	FBRSL1 (ENSXMAG00000022481)	ENSXMAG00000024472	ENSXMAG00000025475	GALNT9 (ENSXMAG00000000087)	atad1a (ENSXMAG00000017961)	ENSXMAG00000017959	piwil2 (ENSXMAG00000005034)	tnksb (ENSXMAG00000004961)	IDUA (ENSXMAG00000026675)	rbp4l (ENSXMAG00000015428)	ENSXMAG00000024759	kcnv2b (ENSXMAG00000015430)	tmem150aa (ENSXMAG00000019069) ##22	ENSXMAG00000021618	ENSXMAG00000002915	ctu1 (ENSXMAG00000002928)	crybb2 (ENSXMAG00000002930)	CRYBB3 (ENSXMAG00000002938)	ENSXMAG00000021829	rnf10 (ENSXMAG00000025135)	ENSXMAG00000003508	unc119.1 (ENSXMAG00000024727)	zgc:162025 (ENSXMAG00000021704)	hnf1a (ENSXMAG00000003472)	msi1b (ENSXMAG00000027103)	prkab1b (ENSXMAG00000026219)	ENSXMAG00000002954	ENSXMAG00000002956
NAME_4	ANCESTRAL SPECIES	155							ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.e.a	ENSGT00940000154885.B.f
Sheepshead minnow	MODERN SPECIES	217								ENSCVAG00000017186	ENSCVAG00000017228	ENSCVAG00000017236	ENSCVAG00000017251	mak16 (ENSCVAG00000017294)	ENSCVAG00000017315	ENSCVAG00000017334	kcnv2b (ENSCVAG00000000447)	tmem150aa (ENSCVAG00000017382) ##22	rnf181 (ENSCVAG00000017403)	PXN (ENSCVAG00000017510)	ctu1 (ENSCVAG00000017525)	crybb2 (ENSCVAG00000017543)	CRYBB3 (ENSCVAG00000017567)	rnf10 (ENSCVAG00000017576)	ENSCVAG00000017611	srp19 (ENSCVAG00000017621)	rbp4l (ENSCVAG00000017650)	IDUA (ENSCVAG00000017691)	tnksb (ENSCVAG00000017903)	FAM163B (ENSCVAG00000017929)	ADAMTSL2 (ENSCVAG00000017974)	mymk (ENSCVAG00000018002)	slc2a8 (ENSCVAG00000018044)
Mummichog	MODERN SPECIES	471									ENSFHEG00000021985	piwil2 (ENSFHEG00000022000)	tnksb (ENSFHEG00000022069)	rbp4l (ENSFHEG00000022079)	ENSFHEG00000022094	IDUA (ENSFHEG00000022103)	kcnv2b (ENSFHEG00000022115)	tmem150aa (ENSFHEG00000022134) ##22	rnf181 (ENSFHEG00000022152)	PXN (ENSFHEG00000022175)	ctu1 (ENSFHEG00000022201)	crybb2 (ENSFHEG00000022216)	CRYBB3 (ENSFHEG00000022241)	ENSFHEG00000022245	rnf10 (ENSFHEG00000000551)	pop5 (ENSFHEG00000022341)	unc119.1 (ENSFHEG00000022355)	ENSFHEG00000022357	hnf1a (ENSFHEG00000022371)	msi1b (ENSFHEG00000022446)	prkab1b (ENSFHEG00000022503)	ENSFHEG00000022607	asgrl1 (ENSFHEG00000022613)
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000154885.A.e.b
Cichlidae	ANCESTRAL SPECIES	29	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	26	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	28	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Haplochromini	ANCESTRAL SPECIES	30	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.gb.b	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Burton s mouthbrooder	MODERN SPECIES	424	zdhhc8b (ENSHBUG00000008678)	pgam5 (ENSHBUG00000001028)	ankle2 (ENSHBUG00000008721)	golga3 (ENSHBUG00000008842)	chfr (ENSHBUG00000008924)	FBRSL1 (ENSHBUG00000008969)	GALNT9 (ENSHBUG00000009025)	atad1a (ENSHBUG00000009068)	ENSHBUG00000009080	piwil2 (ENSHBUG00000011225)	tnksb (ENSHBUG00000011486)	IDUA (ENSHBUG00000011513)	rbp4l (ENSHBUG00000011530)	ENSHBUG00000011538	kcnv2b (ENSHBUG00000011565)	tmem150aa (ENSHBUG00000011590) ##22	ENSHBUG00000011612	ENSHBUG00000011632	ctu1 (ENSHBUG00000011647)	crybb2 (ENSHBUG00000011657)	CRYBB3 (ENSHBUG00000011673)	ENSHBUG00000011682	rnf10 (ENSHBUG00000011694)	ENSHBUG00000011718	unc119.1 (ENSHBUG00000011727)	zgc:162025 (ENSHBUG00000011819)	hnf1a (ENSHBUG00000011833)	msi1b (ENSHBUG00000011841)	TMEM233 (ENSHBUG00000011852)	prkab1b (ENSHBUG00000011881)	ENSHBUG00000011887
Haplochromini_A	ANCESTRAL SPECIES	32	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.gb.b	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
P. nyererei	MODERN SPECIES	348	zdhhc8b (ENSPNYG00000004217)	pgam5 (ENSPNYG00000004138)	ankle2 (ENSPNYG00000004119)	golga3 (ENSPNYG00000004058)	chfr (ENSPNYG00000004029)	FBRSL1 (ENSPNYG00000003992)	GALNT9 (ENSPNYG00000003955)	atad1a (ENSPNYG00000003867)	ENSPNYG00000003844	piwil2 (ENSPNYG00000003305)	tnksb (ENSPNYG00000003131)	IDUA (ENSPNYG00000003054)	rbp4l (ENSPNYG00000002963)	ENSPNYG00000002946	kcnv2b (ENSPNYG00000002935)	tmem150aa (ENSPNYG00000002898) ##22	ENSPNYG00000002875	PXN (ENSPNYG00000002855)	ctu1 (ENSPNYG00000002842)	crybb2 (ENSPNYG00000002813)	CRYBB3 (ENSPNYG00000002791)	ENSPNYG00000002740	rnf10 (ENSPNYG00000002711)	pop5 (ENSPNYG00000002679)	unc119.1 (ENSPNYG00000002646)	zgc:162025 (ENSPNYG00000002583)	hnf1a (ENSPNYG00000002549)	msi1b (ENSPNYG00000002529)	TMEM233 (ENSPNYG00000002496)	prkab1b (ENSPNYG00000002469)	ENSPNYG00000002442
Haplochromini_B	ANCESTRAL SPECIES	44	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.gb.b	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000176261	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Zebra mbuna	MODERN SPECIES	1094	zdhhc8b (ENSMZEG00005018673)	pgam5 (ENSMZEG00005018680)	ankle2 (ENSMZEG00005018692)	golga3 (ENSMZEG00005018696)	chfr (ENSMZEG00005018711)	ENSMZEG00005018719	GALNT9 (ENSMZEG00005018732)	atad1a (ENSMZEG00005018741)	ENSMZEG00005018751	piwil2 (ENSMZEG00005018757)	tnksb (ENSMZEG00005018767)	IDUA (ENSMZEG00005018805)	rbp4l (ENSMZEG00005018812)	atp5meb (ENSMZEG00005018816)	kcnv2b (ENSMZEG00005018820)	tmem150aa (ENSMZEG00005018824) ##22	ENSMZEG00005018828	ENSMZEG00005018837	ctu1 (ENSMZEG00005018846)	crybb2 (ENSMZEG00005018850)	CRYBB3 (ENSMZEG00005018856)	ENSMZEG00005018863	rnf10 (ENSMZEG00005018870)	ENSMZEG00005000069	unc119.1 (ENSMZEG00005000119)	zgc:162025 (ENSMZEG00005000170)	hnf1a (ENSMZEG00005000323)	msi1b (ENSMZEG00005000340)	TMEM233 (ENSMZEG00005000356)	prkab1b (ENSMZEG00005000361)	ENSMZEG00005000401
Eastern happy	MODERN SPECIES	3	golga3 (ENSACLG00000020032)	chfr (ENSACLG00000020092)	FBRSL1 (ENSACLG00000020166)	ENSACLG00000020291	ENSACLG00000020300	ENSACLG00000020329	GALNT9 (ENSACLG00000020391)	atad1a (ENSACLG00000020464)	ENSACLG00000020526	piwil2 (ENSACLG00000020551)	tnksb (ENSACLG00000020662)	IDUA (ENSACLG00000020794)	rbp4l (ENSACLG00000020853)	ENSACLG00000020866	kcnv2b (ENSACLG00000020882)	tmem150aa (ENSACLG00000020889) ##22	ENSACLG00000020903	PXN (ENSACLG00000020934)	ctu1 (ENSACLG00000020990)	crybb2 (ENSACLG00000021006)	CRYBB3 (ENSACLG00000021014)	ENSACLG00000021038	rnf10 (ENSACLG00000021079)	ENSACLG00000021131	unc119.1 (ENSACLG00000021150)	zgc:162025 (ENSACLG00000000104)	hnf1a (ENSACLG00000000096)	msi1b (ENSACLG00000000117)	TMEM233 (ENSACLG00000000168)	prkab1b (ENSACLG00000000176)	ENSACLG00000000236
Lyretail cichlid	MODERN SPECIES	430	ranbp1 (ENSNBRG00000002349)	zdhhc8b (ENSNBRG00000002130)	pgam5 (ENSNBRG00000002069)	ankle2 (ENSNBRG00000001971)	golga3 (ENSNBRG00000001691)	chfr (ENSNBRG00000001650)	ENSNBRG00000001633	FBRSL1 (ENSNBRG00000001555)	GALNT9 (ENSNBRG00000001507)	atad1a (ENSNBRG00000001459)	ENSNBRG00000001440	tnksb (ENSNBRG00000001274)	rbp4l (ENSNBRG00000001260)	ENSNBRG00000001249	kcnv2b (ENSNBRG00000001243)	tmem150aa (ENSNBRG00000001215) ##22	ENSNBRG00000001200	PXN (ENSNBRG00000001155)	ctu1 (ENSNBRG00000001116)	crybb2 (ENSNBRG00000001099)	CRYBB3 (ENSNBRG00000001073)	ENSNBRG00000001058	rnf10 (ENSNBRG00000001054)	ENSNBRG00000001020	unc119.1 (ENSNBRG00000000973)	zgc:162025 (ENSNBRG00000000885)	hnf1a (ENSNBRG00000000857)	msi1b (ENSNBRG00000000841)	prkab1b (ENSNBRG00000000826)	ENSNBRG00000000794	pla2g1b (ENSNBRG00000000785)
Nile tilapia	MODERN SPECIES	3	zdhhc8b (ENSONIG00000011086)	pgam5 (ENSONIG00000011088)	ankle2 (ENSONIG00000011090)	golga3 (ENSONIG00000011095)	chfr (ENSONIG00000011102)	FBRSL1 (ENSONIG00000011109)	GALNT9 (ENSONIG00000011110)	atad1a (ENSONIG00000011114)	ENSONIG00000011120	piwil2 (ENSONIG00000011121)	tnksb (ENSONIG00000011131)	IDUA (ENSONIG00000011141)	rbp4l (ENSONIG00000011148)	ENSONIG00000033968	kcnv2b (ENSONIG00000011153)	tmem150aa (ENSONIG00000011154) ##22	ENSONIG00000011155	PXN (ENSONIG00000011157)	ctu1 (ENSONIG00000011161)	crybb2 (ENSONIG00000011162)	CRYBB3 (ENSONIG00000011163)	ENSONIG00000036057	ENSONIG00000025517	rnf10 (ENSONIG00000011167)	pop5 (ENSONIG00000011172)	unc119b (ENSONIG00000043087)	zgc:162025 (ENSONIG00000011176)	hnf1a (ENSONIG00000011178)	msi1b (ENSONIG00000011182)	TMEM233 (ENSONIG00000011194)	prkab1b (ENSONIG00000036679)
Midas cichlid	MODERN SPECIES	1060	zdhhc8b (ENSACIG00000019851)	pgam5 (ENSACIG00000019833)	ankle2 (ENSACIG00000019768)	golga3 (ENSACIG00000019705)	chfr (ENSACIG00000019655)	FBRSL1 (ENSACIG00000019628)	GALNT9 (ENSACIG00000019605)	atad1a (ENSACIG00000019573)	ENSACIG00000019563	piwil2 (ENSACIG00000018881)	tnksb (ENSACIG00000018757)	IDUA (ENSACIG00000018733)	rbp4l (ENSACIG00000018696)	ENSACIG00000018608	kcnv2b (ENSACIG00000018595)	tmem150aa (ENSACIG00000018576) ##22	rnf181 (ENSACIG00000018561)	PXN (ENSACIG00000018546)	ctu1 (ENSACIG00000018530)	crybb2 (ENSACIG00000018514)	CRYBB3 (ENSACIG00000018497)	ENSACIG00000018476	rnf10 (ENSACIG00000018417)	pop5 (ENSACIG00000018362)	unc119.1 (ENSACIG00000018352)	zgc:162025 (ENSACIG00000018315)	hnf1a (ENSACIG00000018230)	ENSACIG00000018210	msi1b (ENSACIG00000018190)	ENSACIG00000018170	prkab1b (ENSACIG00000018150)
Pomacentridae	ANCESTRAL SPECIES		ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.e.a	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Pomacentridae_A	ANCESTRAL SPECIES	1	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.g
Amphiprion	ANCESTRAL SPECIES	18	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709.db.b	ENSGT00940000156599.f	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B.g
Orange clownfish	MODERN SPECIES	19	zdhhc8b (ENSAPEG00000005113)	pgam5 (ENSAPEG00000005122)	ankle2 (ENSAPEG00000005145)	golga3 (ENSAPEG00000005160)	chfr (ENSAPEG00000005284)	FBRSL1 (ENSAPEG00000005314)	GALNT9 (ENSAPEG00000005360)	atad1a (ENSAPEG00000005410)	ENSAPEG00000005466	piwil2 (ENSAPEG00000005521)	tnksb (ENSAPEG00000006372)	IDUA (ENSAPEG00000006508)	rbp4l (ENSAPEG00000006525)	ENSAPEG00000006535	kcnv2b (ENSAPEG00000006553)	tmem150aa (ENSAPEG00000006560) ##22	rnf181 (ENSAPEG00000006575)	PXN (ENSAPEG00000006617)	ctu1 (ENSAPEG00000006687)	crybb2 (ENSAPEG00000006696)	CRYBB3 (ENSAPEG00000006711)	ENSAPEG00000006725	rnf10 (ENSAPEG00000006746)	unc119.1 (ENSAPEG00000006761)	pop5 (ENSAPEG00000006795)	zgc:162025 (ENSAPEG00000006811)	hnf1a (ENSAPEG00000006840)	msi1b (ENSAPEG00000006857)	ENSAPEG00000006941	prkab1b (ENSAPEG00000006951)	ENSAPEG00000006974
Clown anemonefish	MODERN SPECIES	2808												GNG12 (ENSAOCG00000019908)	gadd45aa (ENSAOCG00000019928)	ENSAOCG00000019951	kcnv2b (ENSAOCG00000019967)	tmem150aa (ENSAOCG00000019987) ##22	rnf181 (ENSAOCG00000020010)
Spiny chromis	MODERN SPECIES	275															kcnv2b (ENSAPOG00000024070)	tmem150aa (ENSAPOG00000024051) ##22	rnf181 (ENSAPOG00000023997)	PXN (ENSAPOG00000023945)	ctu1 (ENSAPOG00000000676)	crybb2 (ENSAPOG00000000672)	CRYBB3 (ENSAPOG00000023771)	ENSAPOG00000023745	rnf10 (ENSAPOG00000023717)	POP5 (ENSAPOG00000023686)	unc119.1 (ENSAPOG00000023647)	zgc:162025 (ENSAPOG00000023575)	hnf1a (ENSAPOG00000023597)	msi1b (ENSAPOG00000023458)	TMEM233 (ENSAPOG00000023344)	prkab1b (ENSAPOG00000023311)	ENSAPOG00000023265
Bicolor damselfish	MODERN SPECIES	1477										tnksb (ENSSPAG00000014845)	IDUA (ENSSPAG00000014995)	rbp4l (ENSSPAG00000015014)	ENSSPAG00000015018	ENSSPAG00000015030	kcnv2b (ENSSPAG00000015035)	tmem150aa (ENSSPAG00000015047) ##22	rnf181 (ENSSPAG00000015083)	ENSSPAG00000015106	ctu1 (ENSSPAG00000015164)	crybb2 (ENSSPAG00000015172)	CRYBB3 (ENSSPAG00000015183)	ENSSPAG00000015241	rnf10 (ENSSPAG00000015279)	pop5 (ENSSPAG00000015306)	unc119.1 (ENSSPAG00000015324)	zgc:162025 (ENSSPAG00000015363)	hnf1a (ENSSPAG00000015447)	msi1b (ENSSPAG00000015573)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Tetraodontidae	ANCESTRAL SPECIES	277															ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552
Tetraodon	MODERN SPECIES	3	ift81 (ENSTNIG00000011445)	ENSTNIG00000011446	anapc7 (ENSTNIG00000011447)	ENSTNIG00000011448	ENSTNIG00000011449	pptc7a (ENSTNIG00000011450)	ENSTNIG00000011451	myl2b (ENSTNIG00000011452)	CUX2 (ENSTNIG00000011453)	mtmr3 (ENSTNIG00000011454)	CIT (ENSTNIG00000011455)	BICDL1 (ENSTNIG00000011456)	rab35b (ENSTNIG00000011457)	GCN1 (ENSTNIG00000011458)	kcnv2b (ENSTNIG00000001502)	tmem150aa (ENSTNIG00000011459) ##22	rnf181 (ENSTNIG00000011460)	rnf10 (ENSTNIG00000002039)	ENSTNIG00000011461	CRYBB3 (ENSTNIG00000011462)	crybb2 (ENSTNIG00000011463)	ctu1 (ENSTNIG00000001952)	PXN (ENSTNIG00000011464)	pop5 (ENSTNIG00000011465)	unc119.1 (ENSTNIG00000011466)	ENSTNIG00000011467	hnf1a (ENSTNIG00000011468)	msi1b (ENSTNIG00000011469)	PRKAB1 (ENSTNIG00000011470)	ENSTNIG00000011471	cox6a1 (ENSTNIG00000011472)
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Ballan wrasse	MODERN SPECIES	38	ankrd39 (ENSLBEG00000007391)	kctd9a (ENSLBEG00000007415)	ENSLBEG00000007479	ENSLBEG00000007529	chfr (ENSLBEG00000007551)	ENSLBEG00000007692	GALNT9 (ENSLBEG00000007861)	atad1a (ENSLBEG00000007909)	ENSLBEG00000007959	piwil2 (ENSLBEG00000008001)	tnksb (ENSLBEG00000008123)	IDUA (ENSLBEG00000008270)	rbp4l (ENSLBEG00000008293)	ENSLBEG00000008310	kcnv2b (ENSLBEG00000008331)	tmem150aa (ENSLBEG00000008345) ##22	rnf181 (ENSLBEG00000008371)	PXN (ENSLBEG00000008411)	ctu1 (ENSLBEG00000008459)	crybb2 (ENSLBEG00000008482)	CRYBB3 (ENSLBEG00000008515)	ENSLBEG00000008532	rnf10 (ENSLBEG00000008558)	pop5 (ENSLBEG00000008652)	unc119.1 (ENSLBEG00000008714)	zgc:162025 (ENSLBEG00000008762)	hnf1a (ENSLBEG00000008745)	msi1b (ENSLBEG00000008789)	prkab1b (ENSLBEG00000008841)	ENSLBEG00000008890	pla2g1b (ENSLBEG00000008903)
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Perciformes	ANCESTRAL SPECIES	6	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Cottioidei	ANCESTRAL SPECIES	11	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00870000136894	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Lumpfish	MODERN SPECIES	24	zdhhc8b (ENSCLMG00005005994)	piwil2 (ENSCLMG00005005997)	ENSCLMG00005005999	atad1a (ENSCLMG00005006001)	GALNT9 (ENSCLMG00005006002)	FBRSL1 (ENSCLMG00005006003)	chfr (ENSCLMG00005006044)	golga3 (ENSCLMG00005006367)	ankle2 (ENSCLMG00005009789)	pgam5 (ENSCLMG00005009810)	tnksb (ENSCLMG00005009829)	IDUA (ENSCLMG00005010416)	ENSCLMG00005010418	ENSCLMG00005010419	kcnv2b (ENSCLMG00005010421)	tmem150aa (ENSCLMG00005010423) ##22	rnf181 (ENSCLMG00005010424)	PXN (ENSCLMG00005010425)	ctu1 (ENSCLMG00005010435)	crybb2 (ENSCLMG00005010437)	CRYBB3 (ENSCLMG00005010439)	ENSCLMG00005010442	rnf10 (ENSCLMG00005010445)	ENSCLMG00005010447	unc119.1 (ENSCLMG00005010449)	zgc:162025 (ENSCLMG00005010450)	hnf1a (ENSCLMG00005010453)	msi1b (ENSCLMG00005010463)	TMEM233 (ENSCLMG00005010505)	prkab1b (ENSCLMG00005010507)	ENSCLMG00005010509
Stickleback	MODERN SPECIES	12	zdhhc8b (ENSGACG00000012949)	pgam5 (ENSGACG00000012945)	ankle2 (ENSGACG00000012934)	golga3 (ENSGACG00000012921)	ENSGACG00000012918	ENSGACG00000012916	chfr (ENSGACG00000012903)	FBRSL1 (ENSGACG00000012894)	GALNT9 (ENSGACG00000012865)	atad1a (ENSGACG00000012861)	ENSGACG00000012857	piwil2 (ENSGACG00000012851)	tnksb (ENSGACG00000012837)	IDUA (ENSGACG00000012817)	kcnv2b (ENSGACG00000012807)	tmem150aa (ENSGACG00000012801) ##22	rnf181 (ENSGACG00000012789)	PXN (ENSGACG00000012778)	ctu1 (ENSGACG00000012764)	crybb2 (ENSGACG00000012752)	CRYBB3 (ENSGACG00000012740)	ENSGACG00000012734	rnf10 (ENSGACG00000012715)	ENSGACG00000012710	unc119.1 (ENSGACG00000012704)	hnf1a (ENSGACG00000012691)	msi1b (ENSGACG00000012679)	prkab1b (ENSGACG00000012648)	ENSGACG00000012644	asgrl1 (ENSGACG00000012642)	cox6a1 (ENSGACG00000012630)
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Pike perch	MODERN SPECIES	16	lhx2b (ENSSLUG00000023891)	ADGRD2 (ENSSLUG00000023884)	nr5a1a (ENSSLUG00000023874)	nr6a1a (ENSSLUG00000023866)	olfml2a (ENSSLUG00000023860)	ENSSLUG00000023854	atad1a (ENSSLUG00000023848)	ENSSLUG00000023816	piwil2 (ENSSLUG00000021186)	ENSSLUG00000021040	tnksb (ENSSLUG00000019568)	IDUA (ENSSLUG00000019501)	rbp4l (ENSSLUG00000019497)	ENSSLUG00000019493	kcnv2b (ENSSLUG00000019490)	tmem150aa (ENSSLUG00000019484) ##22	rnf181 (ENSSLUG00000019478)	PXN (ENSSLUG00000019468)	ctu1 (ENSSLUG00000019460)	crybb2 (ENSSLUG00000019457)	CRYBB3 (ENSSLUG00000019453)	ENSSLUG00000019449	rnf10 (ENSSLUG00000019446)	pop5 (ENSSLUG00000019439)	unc119.1 (ENSSLUG00000019436)	zgc:162025 (ENSSLUG00000019430)	hnf1a (ENSSLUG00000019422)	msi1b (ENSSLUG00000018871)	TMEM233 (ENSSLUG00000018801)	prkab1b (ENSSLUG00000018762)	ENSSLUG00000018746
Channel bull blenny	MODERN SPECIES	23	pgam5 (ENSCGOG00000001193)	ankle2 (ENSCGOG00000001198)	golga3 (ENSCGOG00000001330)	chfr (ENSCGOG00000001922)	FBRSL1 (ENSCGOG00000002237)	GALNT9 (ENSCGOG00000002291)	atad1a (ENSCGOG00000002345)	ENSCGOG00000002348	piwil2 (ENSCGOG00000002449)	ENSCGOG00000004598	tnksb (ENSCGOG00000004678)	IDUA (ENSCGOG00000006303)	rbp4l (ENSCGOG00000006463)	atp5meb (ENSCGOG00000006475)	kcnv2b (ENSCGOG00000006477)	tmem150aa (ENSCGOG00000006479) ##22	rnf181 (ENSCGOG00000006490)	PXN (ENSCGOG00000006497)	ctu1 (ENSCGOG00000006500)	crybb2 (ENSCGOG00000006501)	CRYBB3 (ENSCGOG00000006504)	ENSCGOG00000006509	rnf10 (ENSCGOG00000006515)	pop5 (ENSCGOG00000006526)	unc119.1 (ENSCGOG00000006527)	zgc:162025 (ENSCGOG00000006528)	hnf1a (ENSCGOG00000006529)	msi1b (ENSCGOG00000006550)	ENSCGOG00000006928	prkab1b (ENSCGOG00000006929)	ENSCGOG00000006945
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00390000012859	ENSGT00950000182850.a.b.b.a	ENSGT00500000044989	ENSGT00390000004950	ENSGT00550000074618.b	ENSGT00530000065159	ENSGT00940000155553.e.b	ENSGT00940000165390.b.d	ENSGT00940000164100.A.c.b.b	ENSGT00950000182960.a.b	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Gilthead seabream	MODERN SPECIES	19	ENSSAUG00010005725	ENSSAUG00010005723	ENSSAUG00010005709	ENSSAUG00010005704	ENSSAUG00010005701	ENSSAUG00010005699	ENSSAUG00010005697	ENSSAUG00010005696	ENSSAUG00010005694	ENSSAUG00010005692	tnksb (ENSSAUG00010005654)	IDUA (ENSSAUG00010005616)	rbp4l (ENSSAUG00010005607)	ATP5I (ENSSAUG00010005603)	kcnv2b (ENSSAUG00010005599)	tmem150aa (ENSSAUG00010005596) ##22	rnf181 (ENSSAUG00010005591)	ENSSAUG00010005588	PXN (ENSSAUG00010004996)	ctu1 (ENSSAUG00010004989)	crybb2 (ENSSAUG00010004988)	CRYBB3 (ENSSAUG00010004987)	ENSSAUG00010004985	ENSSAUG00010004983	ENSSAUG00010004982	ENSSAUG00010004980	ENSSAUG00010004979	ENSSAUG00010004974	ENSSAUG00010004973	ENSSAUG00010004971	ENSSAUG00010004969
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	28									ENSGT00950000182960.a.b	ENSGT00940000164100.A.c.b.b	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT01000000215531	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00940000179327	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005006093	cabp1a (ENSLCRG00005006092)	mlec (ENSLCRG00005006091)	ENSLCRG00005006090	hps4 (ENSLCRG00005006088)	ENSLCRG00005006087	cox6a1 (ENSLCRG00005006086)	asgrl1 (ENSLCRG00005006085)	ENSLCRG00005006084	prkab1b (ENSLCRG00005006083)	hnf1a (ENSLCRG00005006081)	msi1b (ENSLCRG00005006079)	ENSLCRG00005006075	ENSLCRG00005006074	kcnv2b (ENSLCRG00005006073)	tmem150aa (ENSLCRG00005006072) ##22	rnf181 (ENSLCRG00005006071)	ENSLCRG00005005902	ctu1 (ENSLCRG00005005898)	CTU1 (ENSLCRG00005005894)	crybb2 (ENSLCRG00005005891)	CRYBB3 (ENSLCRG00005005889)	ENSLCRG00005005886	rnf10 (ENSLCRG00005005881)	ENSLCRG00005005880	ENSLCRG00005005877	ENSLCRG00005005830	ENSLCRG00005005829	tnksb (ENSLCRG00005005703)	IDUA (ENSLCRG00005005588)	rbp4l (ENSLCRG00005005581)
European seabass	MODERN SPECIES	13	ENSDLAG00005006453	ENSDLAG00005012613	ENSDLAG00005011240	ENSDLAG00005020194	ENSDLAG00005002465	ENSDLAG00005004913	ENSDLAG00005021307	ENSDLAG00005031209	ENSDLAG00005033234	ENSDLAG00005009263	tnksb (ENSDLAG00005009305)	ENSDLAG00005010869	ENSDLAG00005010968	atp5meb (ENSDLAG00005030491)	kcnv2b (ENSDLAG00005010981)	ENSDLAG00005027518 ##22	ENSDLAG00005031235	ENSDLAG00005010997	ENSDLAG00005011067	ENSDLAG00005011084	ENSDLAG00005028221	ENSDLAG00005011124	ENSDLAG00005034365	ENSDLAG00005029742	ENSDLAG00005028333	ENSDLAG00005011533	msi1b (ENSDLAG00005029099)	ENSDLAG00005014578	prkab1b (ENSDLAG00005011830)	ENSDLAG00005011840	asgrl1 (ENSDLAG00005011844)
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Anabantaria	ANCESTRAL SPECIES	4	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000154823.a	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Zig-zag eel	MODERN SPECIES	23	pgam5 (ENSMAMG00000020904)	ANKLE2 (ENSMAMG00000020909)	golga3 (ENSMAMG00000020913)	chfr (ENSMAMG00000020932)	ENSMAMG00000020939	ENSMAMG00000000314	ENSMAMG00000000325	atad1a (ENSMAMG00000000353)	ENSMAMG00000000423	piwil2 (ENSMAMG00000000487)	tnksb (ENSMAMG00000001610)	ENSMAMG00000001813	ENSMAMG00000027380	ENSMAMG00000001833	kcnv2b (ENSMAMG00000001847)	ENSMAMG00000001858 ##22	ENSMAMG00000001892	ENSMAMG00000001928	ENSMAMG00000002032	CRYBB2 (ENSMAMG00000024312)	ENSMAMG00000002062	ENSMAMG00000002081	ENSMAMG00000002094	ENSMAMG00000002108	unc119.1 (ENSMAMG00000002190)	ENSMAMG00000002210	hnf1a (ENSMAMG00000002266)	msi1b (ENSMAMG00000002279)	prkab1b (ENSMAMG00000024878)	ENSMAMG00000002363	asgrl1 (ENSMAMG00000002663)
Anabantoidei	ANCESTRAL SPECIES	4	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000154823.a	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B	ENSGT00940000164508
Siamese fighting fish	MODERN SPECIES	20	ENSBSLG00000019893	ankle2 (ENSBSLG00000019915)	golga3 (ENSBSLG00000020002)	chfr (ENSBSLG00000020549)	FBRSL1 (ENSBSLG00000020569)	ENSBSLG00000020624	ENSBSLG00000020627	GALNT9 (ENSBSLG00000021169)	atad1a (ENSBSLG00000021483)	ENSBSLG00000021503	piwil2 (ENSBSLG00000021604)	tnksb (ENSBSLG00000023573)	IDUA (ENSBSLG00000024218)	ENSBSLG00000024226	kcnv2b (ENSBSLG00000024233)	tmem150aa (ENSBSLG00000024242) ##22	rnf181 (ENSBSLG00000024252)	PXN (ENSBSLG00000024259)	piwil2 (ENSBSLG00000024281)	IDUA (ENSBSLG00000024357)	ENSBSLG00000024367	ctu1 (ENSBSLG00000024368)	crybb2 (ENSBSLG00000024371)	CRYBB3 (ENSBSLG00000024373)	ENSBSLG00000024429	rnf10 (ENSBSLG00000024490)	pop5 (ENSBSLG00000024671)	unc119.1 (ENSBSLG00000024684)	zgc:162025 (ENSBSLG00000024688)	hnf1a (ENSBSLG00000024690)	msi1b (ENSBSLG00000024717)
Climbing perch	MODERN SPECIES	22	ENSATEG00000015812	pgam5 (ENSATEG00000015826)	ANKLE2 (ENSATEG00000015849)	golga3 (ENSATEG00000015900)	chfr (ENSATEG00000015922)	ENSATEG00000028739	ENSATEG00000016009	atad1a (ENSATEG00000016069)	ENSATEG00000016100	piwil2 (ENSATEG00000016118)	tnksb (ENSATEG00000016200)	ENSATEG00000016263	ENSATEG00000016316	ENSATEG00000016385	kcnv2b (ENSATEG00000016377)	ENSATEG00000016401 ##22	ENSATEG00000016437	ENSATEG00000016476	ENSATEG00000016548	ENSATEG00000016560	ENSATEG00000016583	ENSATEG00000016609	ENSATEG00000016638	ENSATEG00000016792	unc119.1 (ENSATEG00000016807)	ENSATEG00000016977	hnf1a (ENSATEG00000016837)	msi1b (ENSATEG00000017059)	prkab1b (ENSATEG00000028430)	ENSATEG00000027600	asgrl1 (ENSATEG00000030027)
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a
Pleuronectoidei	ANCESTRAL SPECIES	8	ENSGT00940000158044.a	ENSGT00940000179178	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT01050000245296	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Tongue sole	MODERN SPECIES	398	ENSCSEG00000011453	golga3 (ENSCSEG00000011402)	ENSCSEG00000011384	ENSCSEG00000011380	GALNT9 (ENSCSEG00000011372)	ENSCSEG00000011362	ENSCSEG00000011349	ENSCSEG00000011341	atad1a (ENSCSEG00000011330)	piwil2 (ENSCSEG00000011256)	ENSCSEG00000011245	tnksb (ENSCSEG00000011218)	IDUA (ENSCSEG00000011197)	atp5meb (ENSCSEG00000011188)	kcnv2b (ENSCSEG00000011184)	tmem150aa (ENSCSEG00000011177) ##22	rnf181 (ENSCSEG00000011172)	PXN (ENSCSEG00000011162)	ctu1 (ENSCSEG00000011152)	ENSCSEG00000011144	ENSCSEG00000011134	rnf10 (ENSCSEG00000011117)	pop5 (ENSCSEG00000011103)	unc119.1 (ENSCSEG00000011075)	zgc:162025 (ENSCSEG00000011068)	hnf1a (ENSCSEG00000011056)	msi1b (ENSCSEG00000011032)	ENSCSEG00000010999	prkab1b (ENSCSEG00000011007)	pla2g1b (ENSCSEG00000010992)	COX6A1 (ENSCSEG00000010977)
Turbot	MODERN SPECIES	21	ENSSMAG00000019597	pgam5 (ENSSMAG00000019576)	ANKLE2 (ENSSMAG00000019562)	golga3 (ENSSMAG00000019507)	ENSSMAG00000025006	chfr (ENSSMAG00000019467)	ENSSMAG00000019388	ENSSMAG00000019360	atad1a (ENSSMAG00000019349)	ENSSMAG00000019327	piwil2 (ENSSMAG00000019263)	tnksb (ENSSMAG00000019175)	ENSSMAG00000019151	ENSSMAG00000019120	kcnv2b (ENSSMAG00000019095)	ENSSMAG00000019024 ##22	ENSSMAG00000030428	ENSSMAG00000018961	CTU1 (ENSSMAG00000018958)	CRYBB2 (ENSSMAG00000018937)	ENSSMAG00000018928	ENSSMAG00000018913	ENSSMAG00000018893	ENSSMAG00000018868	unc119.1 (ENSSMAG00000009069)	ENSSMAG00000018853	hnf1a (ENSSMAG00000018841)	msi1b (ENSSMAG00000018824)	prkab1b (ENSSMAG00000018809)	ENSSMAG00000037817	asgrl1 (ENSSMAG00000018795)
Carangaria_A	ANCESTRAL SPECIES	6	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Seriola	ANCESTRAL SPECIES	7	ENSGT00940000154389.b	ENSGT00940000158044.a	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00550000074823.b.b	ENSGT01010000222287.B.a.a.a.b	ENSGT00950000183200.B	ENSGT00940000156161.B	ENSGT00390000015494	ENSGT00510000047107.B.d	ENSGT00940000157438.c	ENSGT01030000234578.A.b.a.a.b ##22	ENSGT00940000160552	ENSGT00940000158897.e.a	ENSGT00390000001041	ENSGT00940000160048	ENSGT00940000158425.a	ENSGT00940000154184.A	ENSGT00390000001731	ENSGT00390000012331	ENSGT00390000014595.b.b	ENSGT00390000010771	ENSGT00940000153818.a.b.a.a	ENSGT00940000156515.a	ENSGT00940000162372.a	ENSGT00940000155307.a.a	ENSGT00940000154885.B
Greater amberjack	MODERN SPECIES	6	pgam5 (ENSSDUG00000002342)	ankle2 (ENSSDUG00000002333)	golga3 (ENSSDUG00000002272)	chfr (ENSSDUG00000002210)	FBRSL1 (ENSSDUG00000002083)	GALNT9 (ENSSDUG00000002014)	atad1a (ENSSDUG00000001959)	ENSSDUG00000001939	piwil2 (ENSSDUG00000001859)	ENSSDUG00000001826	tnksb (ENSSDUG00000001625)	IDUA (ENSSDUG00000001577)	rbp4l (ENSSDUG00000001514)	atp5meb (ENSSDUG00000001500)	kcnv2b (ENSSDUG00000001483)	tmem150aa (ENSSDUG00000001470) ##22	rnf181 (ENSSDUG00000001453)	PXN (ENSSDUG00000001436)	ctu1 (ENSSDUG00000001430)	crybb2 (ENSSDUG00000001364)	CRYBB3 (ENSSDUG00000001336)	ENSSDUG00000001323	rnf10 (ENSSDUG00000001298)	ENSSDUG00000001282	unc119.1 (ENSSDUG00000001255)	zgc:162025 (ENSSDUG00000001198)	hnf1a (ENSSDUG00000001051)	msi1b (ENSSDUG00000001027)	TMEM233 (ENSSDUG00000001006)	prkab1b (ENSSDUG00000000968)	pla2g1b (ENSSDUG00000000935)
Yellowtail amberjack	MODERN SPECIES	3232			cavin4b (ENSSLDG00000018778)	ENSSLDG00000018713	ENSSLDG00000018683	ENSSLDG00000018669	GALNT9 (ENSSLDG00000018643)	atad1a (ENSSLDG00000018621)	ENSSLDG00000018609	piwil2 (ENSSLDG00000017738)	tnksb (ENSSLDG00000017391)	IDUA (ENSSLDG00000017320)	rbp4l (ENSSLDG00000017342)	ENSSLDG00000017306	kcnv2b (ENSSLDG00000017286)	tmem150aa (ENSSLDG00000017242) ##22	rnf181 (ENSSLDG00000017205)	ENSSLDG00000017158	ctu1 (ENSSLDG00000017124)	crybb2 (ENSSLDG00000017116)	CRYBB3 (ENSSLDG00000017099)	ENSSLDG00000017069	rnf10 (ENSSLDG00000017049)	pop5 (ENSSLDG00000017031)	unc119.1 (ENSSLDG00000017010)	zgc:162025 (ENSSLDG00000016950)	hnf1a (ENSSLDG00000016899)	msi1b (ENSSLDG00000016832)	ENSSLDG00000016808	prkab1b (ENSSLDG00000016783)	ENSSLDG00000016776
Barramundi perch	MODERN SPECIES	95	pgam5 (ENSLCAG00010018726)	ankle2 (ENSLCAG00010018736)	golga3 (ENSLCAG00010018801)	chfr (ENSLCAG00010018967)	FBRSL1 (ENSLCAG00010018977)	GALNT9 (ENSLCAG00010019002)	atad1a (ENSLCAG00010019056)	ENSLCAG00010019062	piwil2 (ENSLCAG00010019292)	ENSLCAG00010019843	tnksb (ENSLCAG00010020063)	IDUA (ENSLCAG00010020700)	rbp4l (ENSLCAG00010020707)	ENSLCAG00010020714	kcnv2b (ENSLCAG00010020719)	tmem150aa (ENSLCAG00010020722) ##22	rnf181 (ENSLCAG00010020726)	ENSLCAG00010020746	ctu1 (ENSLCAG00010020775)	crybb2 (ENSLCAG00010020779)	CRYBB3 (ENSLCAG00010020785)	ENSLCAG00010020788	rnf10 (ENSLCAG00010020798)	ENSLCAG00010020816	unc119.1 (ENSLCAG00010020826)	ENSLCAG00010020831	hnf1a (ENSLCAG00010020841)	msi1b (ENSLCAG00010020855)	TMEM233 (ENSLCAG00010020864)	prkab1b (ENSLCAG00010020866)	ENSLCAG00010020871
Pinecone sodierfish	MODERN SPECIES	23	ENSMMDG00005019737	ankle2 (ENSMMDG00005019731)	golga3 (ENSMMDG00005018024)	chfr (ENSMMDG00005017160)	FBRSL1 (ENSMMDG00005017124)	ENSMMDG00005017121	GALNT9 (ENSMMDG00005017117)	atad1a (ENSMMDG00005017109)	ENSMMDG00005017020	piwil2 (ENSMMDG00005013665)	tnksb (ENSMMDG00005013528)	IDUA (ENSMMDG00005013510)	rbp4l (ENSMMDG00005013504)	ENSMMDG00005013501	kcnv2b (ENSMMDG00005013499)	tmem150aa (ENSMMDG00005013498) ##22	ENSMMDG00005013492	vamp5 (ENSMMDG00005013489)	vamp8 (ENSMMDG00005013486)	ncaph (ENSMMDG00005013473)	TACR1 (ENSMMDG00005013458)	zgc:110329 (ENSMMDG00005013455)	SLC4A5 (ENSMMDG00005013372)	ogfod2 (ENSMMDG00005013355)	zgc:113436 (ENSMMDG00005013353)	abcb9 (ENSMMDG00005013322)	vps37ba (ENSMMDG00005013321)	ppp3cca (ENSMMDG00005009641)	ENSMMDG00005009578	tm2d2 (ENSMMDG00005009575)	ENSMMDG00005009543
Spotted gar	MODERN SPECIES	647	hk2 (ENSLOCG00000015312)	figla (ENSLOCG00000015315)	add2 (ENSLOCG00000015316)	snrnp27 (ENSLOCG00000015319)	MXD1 (ENSLOCG00000015320)	zgc:65851 (ENSLOCG00000015323)	tia1 (ENSLOCG00000015324)	C2orf42 (ENSLOCG00000015328)	ENSLOCG00000015332	znf703 (ENSLOCG00000015339)	ENSLOCG00000015341	bmp10 (ENSLOCG00000015342)	arhgap25 (ENSLOCG00000015343)	cds2 (ENSLOCG00000015345)	ENSLOCG00000015351	tmem150aa (ENSLOCG00000015355) ##22	rnf181 (ENSLOCG00000015359)	vamp5 (ENSLOCG00000015361)	ncaph (ENSLOCG00000015362)	tacr1b (ENSLOCG00000015367)	zgc:110329 (ENSLOCG00000015369)	SLC4A5 (ENSLOCG00000015371)	mthfd2 (ENSLOCG00000015377)	mob1a (ENSLOCG00000015380)	fhip2b (ENSLOCG00000015384)	nudt18 (ENSLOCG00000015389)	adam9 (ENSLOCG00000015391)	atad1a (ENSLOCG00000015404)	ENSLOCG00000015406	piwil2 (ENSLOCG00000015407)	slc39a14 (ENSLOCG00000015416)
Reedfish	MODERN SPECIES		ENSECRG00000000199	pcna (ENSECRG00000000200)	KCNIP3 (ENSECRG00000000201)	zgc:152830 (ENSECRG00000000202)	FAHD2A (ENSECRG00000000203)	gpat2 (ENSECRG00000000204)	adra2b (ENSECRG00000000205)	ENSECRG00000000206	dusp2 (ENSECRG00000000207)	pgam2 (ENSECRG00000000208)	gmcl1 (ENSECRG00000000209)	tgfa (ENSECRG00000000210)	fam136a (ENSECRG00000000211)	snrpg (ENSECRG00000000212)	pcyox1 (ENSECRG00000000213)	tmem150aa (ENSECRG00000000214) ##22	rnf181 (ENSECRG00000000215)	vamp8 (ENSECRG00000000216)	ncaph (ENSECRG00000000217)	pum3 (ENSECRG00000000218)	ENSECRG00000000219	ENSECRG00000000220	ENSECRG00000000221	mrps24 (ENSECRG00000000222)	nudcd3 (ENSECRG00000000223)	zgc:65851 (ENSECRG00000000224)	MXD1 (ENSECRG00000000225)	snrnp27 (ENSECRG00000000226)	add2 (ENSECRG00000000227)	figla (ENSECRG00000000228)	hk2 (ENSECRG00000000229)
Elephant shark	MODERN SPECIES	1671					TCIRG1 (ENSCMIG00000010563)	ENSCMIG00000010559	stambpa (ENSCMIG00000010558)	ENSCMIG00000010556	dusp2 (ENSCMIG00000010553)	ENSCMIG00000010552	stard7 (ENSCMIG00000010550)	OGDH (ENSCMIG00000010470)	ENSCMIG00000010460	ENSCMIG00000010459	ENSCMIG00000010458	tmem150aa (ENSCMIG00000010454) ##22	rnf181 (ENSCMIG00000010453)	ENSCMIG00000010450	vamp8 (ENSCMIG00000010449)	GGCX (ENSCMIG00000010446)	usp39 (ENSCMIG00000010426)	si:ch211-283h6.4 (ENSCMIG00000010415)	mat2ab (ENSCMIG00000010351)	ENSCMIG00000010326	ENSCMIG00000010321	ENSCMIG00000010320	ENSCMIG00000010318	ENSCMIG00000010309	kcnip3b (ENSCMIG00000010301)	ENSCMIG00000010281	ENSCMIG00000010225
Cyclostomata	ANCESTRAL SPECIES	1281																ENSGT01030000234578.A.b.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Hagfish	MODERN SPECIES	1050	ENSEBUG00000014904	ENSEBUG00000007538	ENSEBUG00000008695	ENSEBUG00000005691	ENSEBUG00000000809	kcnma1a (ENSEBUG00000016358)	ENSEBUG00000016414	ENSEBUG00000014977	qtrt1 (ENSEBUG00000005878)	uba52 (ENSEBUG00000003268)	ENSEBUG00000005577	ENSEBUG00000010683	ENSEBUG00000007529	ENSEBUG00000006878	SCD5 (ENSEBUG00000003421)	ENSEBUG00000012514 ##22	ENSEBUG00000014381 ##22	ENSEBUG00000007198
Ciona	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.a ##22
Ciona intestinalis	MODERN SPECIES	10	ENSCING00000020021	ENSCING00000004050	ENSCING00000024425	ENSCING00000003998	ENSCING00000020719	ENSCING00000004004	ENSCING00000022912	ENSCING00000004007	ENSCING00000022262	ENSCING00000023597	ENSCING00000019331	ENSCING00000004013	ENSCING00000004029	ENSCING00000024420	ENSCING00000004031	ENSCING00000017985 ##22	ENSCING00000003983	ENSCING00000003991	ENSCING00000014716	ENSCING00000014714	ENSCING00000003993	ENSCING00000016251	ENSCING00000014706	ENSCING00000014705	ENSCING00000003995	ENSCING00000017934	ENSCING00000018635	ENSCING00000020762	ENSCING00000005963	ENSCING00000003975	ENSCING00000018817
Chordata	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.b ##22
Vertebrata	ANCESTRAL SPECIES	236														ENSGT01050000244965	ENSGT01030000234578.A.b.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Gnathostomata	ANCESTRAL SPECIES	1103														ENSGT01050000244965.a	ENSGT01030000234578.A.b.a.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.a.b ##22
Actinopterygii	ANCESTRAL SPECIES	96	ENSGT00390000013819	ENSGT00390000000885	ENSGT00950000183064.a.b.b	ENSGT00390000003100	ENSGT00950000182787.B	ENSGT00950000182787.A	ENSGT00940000155512	ENSGT00940000157973	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000154371.b	ENSGT00940000161927
Neopterygii	ANCESTRAL SPECIES	72	ENSGT00390000013819	ENSGT00390000000885	ENSGT00950000183064.a.b.b	ENSGT00390000003100	ENSGT00950000182787.B	ENSGT00950000182787.A.b	ENSGT00940000155512	ENSGT00940000157973	ENSGT00940000155595	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000154371.b	ENSGT00940000161927	ENSGT00740000116794	ENSGT00740000115593	ENSGT00860000134673	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865
Osteoglossocephalai	ANCESTRAL SPECIES	309											ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b
Osteoglossiformes	ANCESTRAL SPECIES	399											ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282
Asian bonytongue	MODERN SPECIES	13	ube2d3 (ENSSFOG00015003357)	manba (ENSSFOG00015003322)	NFKB1 (ENSSFOG00015003178)	SLC39A8 (ENSSFOG00015003151)	GSR (ENSSFOG00015003089)	pomk (ENSSFOG00015003138)	BEND4 (ENSSFOG00015031570)	SHISA3 (ENSSFOG00015025157)	ATP8A1 (ENSSFOG00015002993)	GRXCR1 (ENSSFOG00015002958)	GABRG1 (ENSSFOG00015031641)	si:ch211-198a12.6 (ENSSFOG00015002902)	stox1 (ENSSFOG00015002825)	ccar1 (ENSSFOG00015002717)	zgc:110319 (ENSSFOG00015028460)	si:dkey-228d14.5 (ENSSFOG00015002681) ##22	eif4e1c (ENSSFOG00015027182)	ENSSFOG00015030611	marchf8 (ENSSFOG00015032982)	alox5a (ENSSFOG00015002570)	slc25a16 (ENSSFOG00015029897)	slc25a16 (ENSSFOG00015028799)	ENSSFOG00015002479	ENSSFOG00015002451	lrmda (ENSSFOG00015002395)	vdac2 (ENSSFOG00015031045)	ANXA11 (ENSSFOG00015002347)	kcnma1a (ENSSFOG00015002215)	ENSSFOG00015026010	ENSSFOG00015031795	KCNA1 (ENSSFOG00015002165)
P. kingsleyae	MODERN SPECIES	194	pyroxd2 (ENSPKIG00000008509)	LOXL4 (ENSPKIG00000008573)	CRTAC1 (ENSPKIG00000008679)	ENSPKIG00000008860	cyp1b1 (ENSPKIG00000008930)	sufu (ENSPKIG00000008960)	ENSPKIG00000009055	PDZD7 (ENSPKIG00000009127)	sfxn3 (ENSPKIG00000009170)	selenou1a (ENSPKIG00000009214)	ENSPKIG00000009243	si:ch211-198a12.6 (ENSPKIG00000009261)	stox1 (ENSPKIG00000009267)	ccar1 (ENSPKIG00000009310)	zgc:110319 (ENSPKIG00000009396)	si:dkey-228d14.5 (ENSPKIG00000009437) ##22	eif4e1c (ENSPKIG00000009484)	ENSPKIG00000009540	slc25a16 (ENSPKIG00000009602)	alox5a (ENSPKIG00000009684)	MARCHF8 (ENSPKIG00000009724)
Clupeocephala	ANCESTRAL SPECIES	59	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b
Euteleosteomorpha	ANCESTRAL SPECIES	220	ENSGT00980000198953	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b
Acanthomorphata	ANCESTRAL SPECIES	24	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219
Euacanthomorphacea	ANCESTRAL SPECIES	6	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Tiger tail seahorse	MODERN SPECIES	511	tp53bp2a (ENSHCOG00000003723)	SEMA4G (ENSHCOG00000003742)	lzts2a (ENSHCOG00000003752)	sfxn3 (ENSHCOG00000003775)	sfxn3 (ENSHCOG00000003811)	ENSHCOG00000003824	ENSHCOG00000003834	ENSHCOG00000003863	mat1a (ENSHCOG00000003901)	zgc:154058 (ENSHCOG00000003915) ##22	ENSHCOG00000004013	si:ch211-198a12.6 (ENSHCOG00000004031)	stox1 (ENSHCOG00000004039)	ccar1 (ENSHCOG00000004083)	zgc:110319 (ENSHCOG00000004095)	si:dkey-228d14.5 (ENSHCOG00000004102) ##22	eif4e1c (ENSHCOG00000004116)	ENSHCOG00000004135	slc25a16 (ENSHCOG00000004156)	ccdc93 (ENSHCOG00000004164)	alox5a (ENSHCOG00000004172)	alox5a (ENSHCOG00000004181)	marchf8 (ENSHCOG00000004199)	zfand4 (ENSHCOG00000004248)	ENSHCOG00000004266	ENSHCOG00000004281	ENSHCOG00000004291	pgam1b (ENSHCOG00000004303)
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Carangaria	ANCESTRAL SPECIES	19	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Carangaria_A	ANCESTRAL SPECIES	25	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Seriola	ANCESTRAL SPECIES	17	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Yellowtail amberjack	MODERN SPECIES	2713	tp53bp2a (ENSSLDG00000020289)	SEMA4G (ENSSLDG00000020247)	lzts2a (ENSSLDG00000020212)	ENSSLDG00000020195	pdzd7a (ENSSLDG00000020157)	sfxn3 (ENSSLDG00000020134)	ENSSLDG00000020117	ENSSLDG00000020109	selenou1a (ENSSLDG00000020076)	mat1a (ENSSLDG00000020047)	zgc:154058 (ENSSLDG00000020033) ##22	si:ch211-198a12.6 (ENSSLDG00000020028)	stox1 (ENSSLDG00000020019)	ccar1 (ENSSLDG00000019960)	zgc:110319 (ENSSLDG00000019918)	si:dkey-228d14.5 (ENSSLDG00000019893) ##22	eif4e1c (ENSSLDG00000019869)	ENSSLDG00000019848	slc25a16 (ENSSLDG00000019821)	alox5a (ENSSLDG00000019789)	marchf8 (ENSSLDG00000019743)	zfand4 (ENSSLDG00000019719)	ENSSLDG00000019605	ENSSLDG00000019544	pgam1a (ENSSLDG00000019539)	marveld1 (ENSSLDG00000019528)	ENSSLDG00000019520	zgc:171482 (ENSSLDG00000019510)	sfrp5 (ENSSLDG00000019498)	golga7ba (ENSSLDG00000019486)	CRTAC1 (ENSSLDG00000019460)
Greater amberjack	MODERN SPECIES	147	tp53bp2a (ENSSDUG00000009580)	SEMA4G (ENSSDUG00000009503)	lzts2a (ENSSDUG00000009475)	pdzd7a (ENSSDUG00000009446)	sfxn3 (ENSSDUG00000009396)	ENSSDUG00000009374	ENSSDUG00000009363	selenou1a (ENSSDUG00000009335)	mat1a (ENSSDUG00000009302)	zgc:154058 (ENSSDUG00000009257) ##22	ENSSDUG00000009240	si:ch211-198a12.6 (ENSSDUG00000009234)	stox1 (ENSSDUG00000009229)	ccar1 (ENSSDUG00000009187)	zgc:110319 (ENSSDUG00000009175)	si:dkey-228d14.5 (ENSSDUG00000009142) ##22	eif4e1c (ENSSDUG00000009117)	ENSSDUG00000009091	slc25a16 (ENSSDUG00000009069)	alox5a (ENSSDUG00000009042)	marchf8 (ENSSDUG00000008987)	zfand4 (ENSSDUG00000008956)	ENSSDUG00000008867	ENSSDUG00000008825	pgam1a (ENSSDUG00000008810)	marveld1 (ENSSDUG00000008794)	ENSSDUG00000008786	zgc:171482 (ENSSDUG00000008773)	sfrp5 (ENSSDUG00000008758)	golga7ba (ENSSDUG00000008742)	CRTAC1 (ENSSDUG00000008706)
Barramundi perch	MODERN SPECIES	14						ENSLCAG00010004474	ENSLCAG00010004468	selenou1a (ENSLCAG00010004462)	mat1a (ENSLCAG00010004388)	zgc:154058 (ENSLCAG00010004371) ##22	ENSLCAG00010004363	si:ch211-198a12.6 (ENSLCAG00010004360)	stox1 (ENSLCAG00010004355)	ccar1 (ENSLCAG00010004327)	zgc:110319 (ENSLCAG00010004319)	si:dkey-228d14.5 (ENSLCAG00010004313) ##22	eif4e1c (ENSLCAG00010004283)	ENSLCAG00010004276	ENSLCAG00010004273	slc25a16 (ENSLCAG00010004272)	alox5a (ENSLCAG00010004266)	marchf8 (ENSLCAG00010004255)	zfand4 (ENSLCAG00010004251)	ENSLCAG00010004244	ENSLCAG00010004237	pgam1a (ENSLCAG00010004235)	marveld1 (ENSLCAG00010004234)	ENSLCAG00010004232	zgc:171482 (ENSLCAG00010004228)	sfrp5 (ENSLCAG00010004224)	golga7ba (ENSLCAG00010004221)
Pleuronectoidei	ANCESTRAL SPECIES	25	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Turbot	MODERN SPECIES	6	ENSSMAG00000001621	ENSSMAG00000001755	LZTS2 (ENSSMAG00000001796)	ENSSMAG00000030911	sfxn3 (ENSSMAG00000001892)	ENSSMAG00000001939	ENSSMAG00000031209	selenou1a (ENSSMAG00000001968)	mat1a (ENSSMAG00000002023)	zgc:154058 (ENSSMAG00000002057) ##22	ENSSMAG00000002081	ENSSMAG00000002089	stox1 (ENSSMAG00000002098)	ccar1 (ENSSMAG00000002119)	zgc:110319 (ENSSMAG00000002222)	si:dkey-228d14.5 (ENSSMAG00000002228) ##22	eif4e1c (ENSSMAG00000002255)	ENSSMAG00000002276	ENSSMAG00000002287	slc25a16 (ENSSMAG00000002289)	alox5a (ENSSMAG00000002325)	marchf8 (ENSSMAG00000002381)	ZFAND4 (ENSSMAG00000002454)	ENSSMAG00000002473	ENSSMAG00000002635	ENSSMAG00000024696	ENSSMAG00000002692	ENSSMAG00000002697	ENSSMAG00000002708	zgc:171482 (ENSSMAG00000002715)	sfrp5 (ENSSMAG00000002734)
Tongue sole	MODERN SPECIES	3	fuom (ENSCSEG00000006986)	flrt3 (ENSCSEG00000006975)	ENSCSEG00000006931	tasp1 (ENSCSEG00000006877)	ism1 (ENSCSEG00000006862)	sptlc3 (ENSCSEG00000006855)	BTBD3 (ENSCSEG00000006847)	jag1b (ENSCSEG00000006774)	mat1a (ENSCSEG00000006756)	zgc:154058 (ENSCSEG00000006748) ##22	ENSCSEG00000006742	si:ch211-198a12.6 (ENSCSEG00000006739)	ENSCSEG00000006729	ccar1 (ENSCSEG00000006707)	zgc:110319 (ENSCSEG00000006699)	si:dkey-228d14.5 (ENSCSEG00000006688) ##22	eif4e1c (ENSCSEG00000006680)	ENSCSEG00000006668	slc25a16 (ENSCSEG00000006645)	alox5a (ENSCSEG00000006607)	ENSCSEG00000006577	zfand4 (ENSCSEG00000006564)	ENSCSEG00000006553	ENSCSEG00000006534	PGAM1 (ENSCSEG00000006519)	marveld1 (ENSCSEG00000006515)	ENSCSEG00000006514	zgc:171482 (ENSCSEG00000006509)	sfrp5 (ENSCSEG00000006506)	golga7ba (ENSCSEG00000006502)	CRTAC1 (ENSCSEG00000006493)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Zig-zag eel	MODERN SPECIES	6	fam135a (ENSMAMG00000021781)	col9a1b (ENSMAMG00000021789)	ENSMAMG00000021803	lmbrd1 (ENSMAMG00000021805)	ADGRB3 (ENSMAMG00000021818)	ENSMAMG00000024686	ENSMAMG00000021838	ENSMAMG00000021841	mat1a (ENSMAMG00000021845)	ENSMAMG00000021849 ##22	ENSMAMG00000021852	ENSMAMG00000021854	stox1 (ENSMAMG00000000303)	ccar1 (ENSMAMG00000000309)	zgc:110319 (ENSMAMG00000000383)	si:dkey-228d14.5 (ENSMAMG00000027672) ##22	eif4e1c (ENSMAMG00000000450)	TET1 (ENSMAMG00000000506)	slc25a16 (ENSMAMG00000000546)	alox5a (ENSMAMG00000000596)	marchf8 (ENSMAMG00000000649)	ZFAND4 (ENSMAMG00000000662)	ENSMAMG00000000703	ENSMAMG00000000839	ENSMAMG00000000913	ENSMAMG00000000923	ENSMAMG00000001014	zgc:171482 (ENSMAMG00000001031)	sfrp5 (ENSMAMG00000001048)	GOLGA7B (ENSMAMG00000024613)	CRTAC1 (ENSMAMG00000001076)
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Climbing perch	MODERN SPECIES	6	SEMA4G (ENSATEG00000002125)	lzts2a (ENSATEG00000002117)	ENSATEG00000027993	pdzd7a (ENSATEG00000002064)	sfxn3 (ENSATEG00000029671)	ENSATEG00000001944	ENSATEG00000027954	selenou1a (ENSATEG00000001987)	mat1a (ENSATEG00000001892)	zgc:154058 (ENSATEG00000001851) ##22	ENSATEG00000001843	ENSATEG00000001833	stox1 (ENSATEG00000001830)	ccar1 (ENSATEG00000001698)	zgc:110319 (ENSATEG00000001685)	si:dkey-228d14.5 (ENSATEG00000025545) ##22	eif4e1c (ENSATEG00000026885)	ENSATEG00000001663	slc25a16 (ENSATEG00000027178)	alox5a (ENSATEG00000001548)	marchf8 (ENSATEG00000001524)	ZFAND4 (ENSATEG00000001509)	ENSATEG00000001486	ENSATEG00000001472	ENSATEG00000001446	ENSATEG00000001419	ENSATEG00000001393	zgc:171482 (ENSATEG00000001371)	ENSATEG00000025382	sfrp5 (ENSATEG00000001362)	GOLGA7B (ENSATEG00000027423)
Siamese fighting fish	MODERN SPECIES	6	tp53bp2a (ENSBSLG00000022960)	SEMA4G (ENSBSLG00000022887)	lzts2a (ENSBSLG00000022866)	ENSBSLG00000022848	pdzd7a (ENSBSLG00000022782)	sfxn3 (ENSBSLG00000022767)	ENSBSLG00000022764	selenou1a (ENSBSLG00000022757)	mat1a (ENSBSLG00000022609)	zgc:154058 (ENSBSLG00000022587) ##22	ENSBSLG00000022580	si:ch211-198a12.6 (ENSBSLG00000022579)	stox1 (ENSBSLG00000022576)	ccar1 (ENSBSLG00000022275)	zgc:110319 (ENSBSLG00000022252)	si:dkey-228d14.5 (ENSBSLG00000022245) ##22	eif4e1c (ENSBSLG00000022234)	TET1 (ENSBSLG00000022230)	slc25a16 (ENSBSLG00000022220)	alox5a (ENSBSLG00000022193)	marchf8 (ENSBSLG00000022176)	zfand4 (ENSBSLG00000022171)	ENSBSLG00000022115	ENSBSLG00000022097	pgam1a (ENSBSLG00000022085)	marveld1 (ENSBSLG00000022078)	ENSBSLG00000022068	ENSBSLG00000022054	zgc:171482 (ENSBSLG00000022050)	sfrp5 (ENSBSLG00000022037)	golga7ba (ENSBSLG00000022031)
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Tetraodontidae	ANCESTRAL SPECIES	7	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT00940000157609	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Fugu	MODERN SPECIES	16	lzts2a (ENSTRUG00000012594)	pdzd7a (ENSTRUG00000012702)	ENSTRUG00000024665	sfxn3 (ENSTRUG00000012754)	ENSTRUG00000024600	ENSTRUG00000022292	selenou1a (ENSTRUG00000025147)	mat1a (ENSTRUG00000032808)	zgc:154058 (ENSTRUG00000012956) ##22	ENSTRUG00000031477	si:ch211-198a12.6 (ENSTRUG00000023373)	stox1 (ENSTRUG00000021677)	ccar1 (ENSTRUG00000013280)	zgc:110319 (ENSTRUG00000013457)	echs1 (ENSTRUG00000013493)	si:dkey-228d14.5 (ENSTRUG00000013556) ##22	eif4e1c (ENSTRUG00000029039)	ENSTRUG00000021262	slc25a16 (ENSTRUG00000013655)	alox5a (ENSTRUG00000002647)	marchf8 (ENSTRUG00000025265)	zfand4 (ENSTRUG00000004042)	ENSTRUG00000004311	ENSTRUG00000005455	pgam1a (ENSTRUG00000022599)	marveld1 (ENSTRUG00000005698)	ENSTRUG00000022628	ENSTRUG00000032921	zgc:171482 (ENSTRUG00000005705)	sfrp5 (ENSTRUG00000021491)	crtac1 (ENSTRUG00000006008)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Ballan wrasse	MODERN SPECIES	298	tp53bp2a (ENSLBEG00000008017)	SEMA4G (ENSLBEG00000007912)	lzts2a (ENSLBEG00000007764)	ENSLBEG00000007722	pdzd7a (ENSLBEG00000007662)	sfxn3 (ENSLBEG00000007496)	selenou1a (ENSLBEG00000007449)	ENSLBEG00000007433	ENSLBEG00000007388	mat1a (ENSLBEG00000007342)	zgc:154058 (ENSLBEG00000007325) ##22	si:ch211-198a12.6 (ENSLBEG00000007315)	stox1 (ENSLBEG00000007252)	ccar1 (ENSLBEG00000007156)	zgc:110319 (ENSLBEG00000007112)	si:dkey-228d14.5 (ENSLBEG00000007056) ##22	eif4e1c (ENSLBEG00000007011)	ENSLBEG00000006929	slc25a16 (ENSLBEG00000006861)	alox5a (ENSLBEG00000006762)	marchf8 (ENSLBEG00000006681)	zfand4 (ENSLBEG00000006651)	ENSLBEG00000006502	pgam1a (ENSLBEG00000006415)	marveld1 (ENSLBEG00000006382)	ENSLBEG00000006357
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
European seabass	MODERN SPECIES	1	ENSDLAG00005000395	SEMA4G (ENSDLAG00005000377)	lzts2a (ENSDLAG00005000375)	ENSDLAG00005000371	pdzd7a (ENSDLAG00005000364)	sfxn3 (ENSDLAG00005030223)	ENSDLAG00005000336	selenou1a (ENSDLAG00005031122)	mat1a (ENSDLAG00005000221)	zgc:154058 (ENSDLAG00005027235) ##22	ENSDLAG00005000118	ENSDLAG00005034738	stox1 (ENSDLAG00005000108)	ccar1 (ENSDLAG00005000085)	zgc:110319 (ENSDLAG00005000075)	si:dkey-228d14.5 (ENSDLAG00005000069) ##22	eif4e1c (ENSDLAG00005027071)	ENSDLAG00005014305	slc25a16 (ENSDLAG00005014269)	alox5a (ENSDLAG00005014207)	marchf8 (ENSDLAG00005014173)	ZFAND4 (ENSDLAG00005014148)	ENSDLAG00005014064	ENSDLAG00005014016	ENSDLAG00005013994	ENSDLAG00005013980	zgc:171482 (ENSDLAG00005013971)	sfrp5 (ENSDLAG00005013957)	GOLGA7B (ENSDLAG00005013948)	CRTAC1 (ENSDLAG00005013859)	LOXL4 (ENSDLAG00005013817)
Large yellow croaker	MODERN SPECIES	2	tp53bp2a (ENSLCRG00005012753)	SEMA4G (ENSLCRG00005012743)	lzts2a (ENSLCRG00005012740)	ENSLCRG00005012738	pdzd7a (ENSLCRG00005012736)	sfxn3 (ENSLCRG00005012730)	ENSLCRG00005012729	ENSLCRG00005012727	selenou1a (ENSLCRG00005012725)	mat1a (ENSLCRG00005010716)	zgc:154058 (ENSLCRG00005010709) ##22	si:ch211-198a12.6 (ENSLCRG00005010707)	stox1 (ENSLCRG00005010706)	ccar1 (ENSLCRG00005010601)	zgc:110319 (ENSLCRG00005010598)	si:dkey-228d14.5 (ENSLCRG00005010597) ##22	eif4e1c (ENSLCRG00005010542)	ENSLCRG00005010540	slc25a16 (ENSLCRG00005010538)	alox5a (ENSLCRG00005010486)	marchf8 (ENSLCRG00005010457)	zfand4 (ENSLCRG00005010454)	ENSLCRG00005010452	ENSLCRG00005010450	pgam1a (ENSLCRG00005010445)	marveld1 (ENSLCRG00005010443)	ENSLCRG00005010442	ENSLCRG00005010441	zgc:171482 (ENSLCRG00005010440)	sfrp5 (ENSLCRG00005010438)	golga7ba (ENSLCRG00005010435)
Gilthead seabream	MODERN SPECIES	6	SEMA4G (ENSSAUG00010025787)	lzts2a (ENSSAUG00010025789)	pdzd7a (ENSSAUG00010025790)	ENSSAUG00010025793	sfxn3 (ENSSAUG00010025794)	ENSSAUG00010025797	ENSSAUG00010025800	ENSSAUG00010025799	mat1a (ENSSAUG00010025808)	zgc:154058 (ENSSAUG00010025827) ##22	ENSSAUG00010025828	si:ch211-198a12.6 (ENSSAUG00010025829)	stox1 (ENSSAUG00010025831)	ccar1 (ENSSAUG00010025837)	zgc:110319 (ENSSAUG00010025996)	si:dkey-228d14.5 (ENSSAUG00010025997) ##22	eif4e1c (ENSSAUG00010025999)	TET1 (ENSSAUG00010026001)	slc25a16 (ENSSAUG00010026002)	alox5a (ENSSAUG00010026005)	marchf8 (ENSSAUG00010026006)	zfand4 (ENSSAUG00010026008)	ENSSAUG00010026015	pgam1a (ENSSAUG00010026018)	marveld1 (ENSSAUG00010026020)	ENSSAUG00010026021	ENSSAUG00010026022	ENSSAUG00010026023	zgc:171482 (ENSSAUG00010026024)	sfrp5 (ENSSAUG00010013011)	golga7ba (ENSSAUG00010013014)
Perciformes	ANCESTRAL SPECIES	17	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Perciformes_a	ANCESTRAL SPECIES	16	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Channel bull blenny	MODERN SPECIES	6	ENSCGOG00000017470	XPO5 (ENSCGOG00000016740)	tp53bp2a (ENSCGOG00000016405)	lzts2a (ENSCGOG00000016387)	ENSCGOG00000016385	pdzd7a (ENSCGOG00000016379)	sfxn3 (ENSCGOG00000016327)	selenou1a (ENSCGOG00000016312)	ENSCGOG00000016300	mat1a (ENSCGOG00000016114)	zgc:154058 (ENSCGOG00000016103) ##22	si:ch211-198a12.6 (ENSCGOG00000016101)	stox1 (ENSCGOG00000016100)	ccar1 (ENSCGOG00000015998)	zgc:110319 (ENSCGOG00000015996)	si:dkey-228d14.5 (ENSCGOG00000015994) ##22	eif4e1c (ENSCGOG00000015979)	ENSCGOG00000015976	slc25a16 (ENSCGOG00000015970)	alox5a (ENSCGOG00000015424)	marchf8 (ENSCGOG00000015399)	zfand4 (ENSCGOG00000015392)	ENSCGOG00000015373	ENSCGOG00000015371	pgam1a (ENSCGOG00000015347)	marveld1 (ENSCGOG00000015344)	ENSCGOG00000015336	zgc:171482 (ENSCGOG00000015332)	sfrp5 (ENSCGOG00000015328)	golga7ba (ENSCGOG00000015325)	CRTAC1 (ENSCGOG00000015313)
Cottioidei	ANCESTRAL SPECIES	17	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Stickleback	MODERN SPECIES	6	lzts2a (ENSGACG00000008031)	ENSGACG00000008028	sfxn3 (ENSGACG00000008020)	ENSGACG00000008018	selenou1a (ENSGACG00000008002)	mat1a (ENSGACG00000007957)	ENSGACG00000007954	zgc:154058 (ENSGACG00000007943) ##22	ENSGACG00000007939	ENSGACG00000007928	ENSGACG00000007924	ENSGACG00000007922	stox1 (ENSGACG00000007917)	ccar1 (ENSGACG00000007905)	zgc:110319 (ENSGACG00000007857)	si:dkey-228d14.5 (ENSGACG00000007851) ##22	eif4e1c (ENSGACG00000007799)	ENSGACG00000007793	slc25a16 (ENSGACG00000007784)	alox5a (ENSGACG00000007762)	marchf8 (ENSGACG00000007749)	zfand4 (ENSGACG00000007740)	ENSGACG00000007709	ENSGACG00000007703	pgam1a (ENSGACG00000007692)	marveld1 (ENSGACG00000007690)	ENSGACG00000007685	zgc:171482 (ENSGACG00000007680)	sfrp5 (ENSGACG00000007665)	golga7ba (ENSGACG00000007656)	CRTAC1 (ENSGACG00000007647)
Lumpfish	MODERN SPECIES	6	SEMA4G (ENSCLMG00005013737)	lzts2a (ENSCLMG00005013735)	ENSCLMG00005013734	pdzd7a (ENSCLMG00005013730)	sfxn3 (ENSCLMG00005013653)	ENSCLMG00005013650	ENSCLMG00005013648	ENSCLMG00005013647	ENSCLMG00005013644	mat1a (ENSCLMG00005013501)	zgc:154058 (ENSCLMG00005013493) ##22	ENSCLMG00005013487	ENSCLMG00005013484	ccar1 (ENSCLMG00005013456)	zgc:110319 (ENSCLMG00005013444)	si:dkey-228d14.5 (ENSCLMG00005013443) ##22	eif4e1c (ENSCLMG00005013442)	ENSCLMG00005013440	slc25a16 (ENSCLMG00005013439)	alox5a (ENSCLMG00005013438)	alox5a (ENSCLMG00005013436)	marchf8 (ENSCLMG00005013435)	zfand4 (ENSCLMG00005013434)	ENSCLMG00005013432	ENSCLMG00005013431	ENSCLMG00005013430	marveld1 (ENSCLMG00005013429)	ENSCLMG00005013428	zgc:171482 (ENSCLMG00005013427)	sfrp5 (ENSCLMG00005013426)	GOLGA7B (ENSCLMG00005013410)
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Ovalentaria_B	ANCESTRAL SPECIES	7	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Cichlidae	ANCESTRAL SPECIES	13	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	16	ENSGT00940000154078.a.a.b	ENSGT00940000177134.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134.a.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	11	ENSGT00940000154078.a.a.b	ENSGT00940000177134.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134.a.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Haplochromini	ANCESTRAL SPECIES	10	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Burton s mouthbrooder	MODERN SPECIES	275	SEMA4G (ENSHBUG00000022418)	lzts2a (ENSHBUG00000022456)	ENSHBUG00000022469	pdzd7a (ENSHBUG00000000793)	sfxn3 (ENSHBUG00000022558)	ENSHBUG00000022575	ENSHBUG00000022600	selenou1a (ENSHBUG00000022668)	mat1a (ENSHBUG00000000906)	zgc:154058 (ENSHBUG00000022736) ##22	ENSHBUG00000022756	si:ch211-198a12.6 (ENSHBUG00000022762)	stox1 (ENSHBUG00000022770)	ccar1 (ENSHBUG00000022896)	zgc:110319 (ENSHBUG00000022908)	si:dkey-228d14.5 (ENSHBUG00000022915) ##22	eif4e1c (ENSHBUG00000022939)	TET1 (ENSHBUG00000022943)	slc25a16 (ENSHBUG00000022972)	alox5a (ENSHBUG00000023049)	marchf8 (ENSHBUG00000023102)	zfand4 (ENSHBUG00000023124)	ENSHBUG00000023180	ENSHBUG00000023217	pgam1a (ENSHBUG00000023233)	marveld1 (ENSHBUG00000023250)	ENSHBUG00000000713	zgc:171482 (ENSHBUG00000023289)	sfrp5 (ENSHBUG00000023302)	golga7ba (ENSHBUG00000023337)	CRTAC1 (ENSHBUG00000023382)
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
P. nyererei	MODERN SPECIES	431					sfxn3 (ENSPNYG00000007059)	ENSPNYG00000007109	ENSPNYG00000007130	ENSPNYG00000007147	mat1a (ENSPNYG00000007167)	zgc:154058 (ENSPNYG00000007209) ##22	ENSPNYG00000007254	si:ch211-198a12.6 (ENSPNYG00000007273)	stox1 (ENSPNYG00000007282)	ccar1 (ENSPNYG00000007300)	zgc:110319 (ENSPNYG00000007389)	si:dkey-228d14.5 (ENSPNYG00000007428) ##22	eif4e1c (ENSPNYG00000007444)	TET1 (ENSPNYG00000007484)	slc25a16 (ENSPNYG00000007500)	alox5a (ENSPNYG00000007540)	marchf8 (ENSPNYG00000007575)	zfand4 (ENSPNYG00000007604)	ENSPNYG00000007646	ENSPNYG00000007729	pgam1a (ENSPNYG00000007741)	ENSPNYG00000007749	marveld1 (ENSPNYG00000007758)	zgc:171482 (ENSPNYG00000007773)	sfrp5 (ENSPNYG00000007783)	golga7ba (ENSPNYG00000007803)	CRTAC1 (ENSPNYG00000007818)
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000154078.a.a.b	ENSGT00940000177134.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00940000165336.a.a.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Eastern happy	MODERN SPECIES	4	SEMA4G (ENSACLG00000011543)	lzts2a (ENSACLG00000011524)	ENSACLG00000011521	pdzd7a (ENSACLG00000011498)	sfxn3 (ENSACLG00000011485)	ENSACLG00000011475	ENSACLG00000011469	ENSACLG00000011455	mat1a (ENSACLG00000011447)	zgc:154058 (ENSACLG00000011435) ##22	ENSACLG00000011241	si:ch211-198a12.6 (ENSACLG00000011238)	stox1 (ENSACLG00000011234)	ccar1 (ENSACLG00000011175)	zgc:110319 (ENSACLG00000011165)	si:dkey-228d14.5 (ENSACLG00000011145) ##22	eif4e1c (ENSACLG00000011119)	TET1 (ENSACLG00000011097)	slc25a16 (ENSACLG00000011057)	alox5a (ENSACLG00000011007)	ENSACLG00000011002	marchf8 (ENSACLG00000010899)	zfand4 (ENSACLG00000010831)	ENSACLG00000010645	ENSACLG00000010571	pgam1a (ENSACLG00000010556)	marveld1 (ENSACLG00000010546)	ENSACLG00000010535	ENSACLG00000010524	zgc:171482 (ENSACLG00000010511)	sfrp5 (ENSACLG00000010486)
Zebra mbuna	MODERN SPECIES	1095	lzts2a (ENSMZEG00005027659)	pdzd7a (ENSMZEG00005027660)	ENSMZEG00005027662	sfxn3 (ENSMZEG00005027664)	ENSMZEG00005027667	ENSMZEG00005027670	selenou1a (ENSMZEG00005027673)	ENSMZEG00005027675	mat1a (ENSMZEG00005027676)	zgc:154058 (ENSMZEG00005027678) ##22	ENSMZEG00005027679	si:ch211-198a12.6 (ENSMZEG00005027680)	stox1 (ENSMZEG00005027681)	ccar1 (ENSMZEG00005027683)	zgc:110319 (ENSMZEG00005027685)	si:dkey-228d14.5 (ENSMZEG00005027686) ##22	eif4e1c (ENSMZEG00005027687)	TET1 (ENSMZEG00005027690)	slc25a16 (ENSMZEG00005027692)	alox5a (ENSMZEG00005027695)	marchf8 (ENSMZEG00005027700)	zfand4 (ENSMZEG00005027704)	ENSMZEG00005027709	ENSMZEG00005027714	pgam1a (ENSMZEG00005027718)	marveld1 (ENSMZEG00005027719)	ENSMZEG00005027720	zgc:171482 (ENSMZEG00005027721)	sfrp5 (ENSMZEG00005027723)	golga7ba (ENSMZEG00005027725)	CRTAC1 (ENSMZEG00005027727)
Lyretail cichlid	MODERN SPECIES	295	tp53bp2a (ENSNBRG00000020264)	SEMA4G (ENSNBRG00000020332)	lzts2a (ENSNBRG00000020378)	pdzd7a (ENSNBRG00000020407)	ENSNBRG00000020450	sfxn3 (ENSNBRG00000020459)	selenou1a (ENSNBRG00000020482)	ENSNBRG00000020532	ENSNBRG00000020536	mat1a (ENSNBRG00000020548)	zgc:154058 (ENSNBRG00000020577) ##22	si:ch211-198a12.6 (ENSNBRG00000020608)	stox1 (ENSNBRG00000020614)	ccar1 (ENSNBRG00000020668)	zgc:110319 (ENSNBRG00000020752)	si:dkey-228d14.5 (ENSNBRG00000020761) ##22	eif4e1c (ENSNBRG00000020784)	TET1 (ENSNBRG00000020812)	slc25a16 (ENSNBRG00000020851)	alox5a (ENSNBRG00000020869)	marchf8 (ENSNBRG00000020900)	zfand4 (ENSNBRG00000020908)	ENSNBRG00000020927	ENSNBRG00000020995	pgam1a (ENSNBRG00000021002)	ENSNBRG00000021015	marveld1 (ENSNBRG00000021023)	zgc:171482 (ENSNBRG00000021035)	sfrp5 (ENSNBRG00000021056)	golga7ba (ENSNBRG00000021066)	CRTAC1 (ENSNBRG00000021083)
Nile tilapia	MODERN SPECIES	4	lzts2a (ENSONIG00000039935)	pdzd7a (ENSONIG00000018448)	ENSONIG00000041166	ENSONIG00000031457	sfxn3 (ENSONIG00000018442)	ENSONIG00000042100	ENSONIG00000038904	selenou1a (ENSONIG00000039838)	mat1a (ENSONIG00000034044)	zgc:154058 (ENSONIG00000018436) ##22	ENSONIG00000018432	si:ch211-198a12.6 (ENSONIG00000021241)	stox1 (ENSONIG00000018431)	ccar1 (ENSONIG00000018419)	zgc:110319 (ENSONIG00000041926)	si:dkey-228d14.5 (ENSONIG00000018414) ##22	ENSONIG00000018370	eif4e1c (ENSONIG00000018400)	ENSONIG00000041501	TET1 (ENSONIG00000033407)	slc25a16 (ENSONIG00000018396)	alox5a (ENSONIG00000018377)	marchf8 (ENSONIG00000028453)	zfand4 (ENSONIG00000018374)	ENSONIG00000018368	pgam1a (ENSONIG00000018366)	marveld1 (ENSONIG00000033243)	ENSONIG00000033910	zgc:171482 (ENSONIG00000018365)	sfrp5 (ENSONIG00000018364)	golga7ba (ENSONIG00000018362)
Midas cichlid	MODERN SPECIES	452	SEMA4G (ENSACIG00000020904)	lzts2a (ENSACIG00000020939)	pdzd7a (ENSACIG00000020975)	ENSACIG00000021006	sfxn3 (ENSACIG00000021016)	selenou1a (ENSACIG00000021029)	ENSACIG00000021053	ENSACIG00000021068	mat1a (ENSACIG00000021076)	zgc:154058 (ENSACIG00000021092) ##22	ENSACIG00000021103	si:ch211-198a12.6 (ENSACIG00000021106)	stox1 (ENSACIG00000021117)	ccar1 (ENSACIG00000021164)	zgc:110319 (ENSACIG00000021207)	si:dkey-228d14.5 (ENSACIG00000021231) ##22	eif4e1c (ENSACIG00000021242)	ENSACIG00000021268	slc25a16 (ENSACIG00000021324)	alox5a (ENSACIG00000021356)	marchf8 (ENSACIG00000021390)	zfand4 (ENSACIG00000021402)	ENSACIG00000021418	ENSACIG00000021475	ENSACIG00000021489	marveld1 (ENSACIG00000021493)	ENSACIG00000021502	zgc:171482 (ENSACIG00000021512)	sfrp5 (ENSACIG00000021531)	golga7ba (ENSACIG00000021626)	CRTAC1 (ENSACIG00000021638)
Pomacentridae	ANCESTRAL SPECIES	9	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111.k	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Bicolor damselfish	MODERN SPECIES	2380						ENSSPAG00000021526	ENSSPAG00000021520	ENSSPAG00000021500	ENSSPAG00000021485	mat1a (ENSSPAG00000021464)	zgc:154058 (ENSSPAG00000021455) ##22	si:ch211-198a12.6 (ENSSPAG00000021451)	stox1 (ENSSPAG00000021445)	ccar1 (ENSSPAG00000021364)	zgc:110319 (ENSSPAG00000021349)	si:dkey-228d14.5 (ENSSPAG00000021339) ##22	eif4e1c (ENSSPAG00000021325)
Pomacentridae_A	ANCESTRAL SPECIES	7	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111.k	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Amphiprion	ANCESTRAL SPECIES	13	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00940000177859	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111.k	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Orange clownfish	MODERN SPECIES	12	pdzd7a (ENSAPEG00000012870)	ENSAPEG00000012910	sfxn3 (ENSAPEG00000012927)	KCNMA1 (ENSAPEG00000013012)	ENSAPEG00000013050	ENSAPEG00000013074	ENSAPEG00000013092	ENSAPEG00000013115	mat1a (ENSAPEG00000013131)	zgc:154058 (ENSAPEG00000013165) ##22	ENSAPEG00000013175	si:ch211-198a12.6 (ENSAPEG00000013186)	stox1 (ENSAPEG00000013192)	ccar1 (ENSAPEG00000013204)	zgc:110319 (ENSAPEG00000013265)	si:dkey-228d14.5 (ENSAPEG00000013274) ##22	eif4e1c (ENSAPEG00000013289)	ENSAPEG00000013312	slc25a16 (ENSAPEG00000013338)	alox5a (ENSAPEG00000013393)	marchf8 (ENSAPEG00000013815)	zfand4 (ENSAPEG00000013860)	ENSAPEG00000013906	ENSAPEG00000014065	pgam1a (ENSAPEG00000014092)	marveld1 (ENSAPEG00000014120)	ENSAPEG00000014131	zgc:171482 (ENSAPEG00000014154)	sfrp5 (ENSAPEG00000014169)	golga7ba (ENSAPEG00000014181)	CRTAC1 (ENSAPEG00000014202)
Clown anemonefish	MODERN SPECIES	3602	SEMA4G (ENSAOCG00000004667)	lzts2a (ENSAOCG00000004622)	pdzd7a (ENSAOCG00000004604)	ENSAOCG00000004571	sfxn3 (ENSAOCG00000004562)	ENSAOCG00000004534	ENSAOCG00000004523	ENSAOCG00000004510	ENSAOCG00000002093	mat1a (ENSAOCG00000004480)	zgc:154058 (ENSAOCG00000004448) ##22	si:ch211-198a12.6 (ENSAOCG00000004437)	stox1 (ENSAOCG00000004430)	ccar1 (ENSAOCG00000004413)	zgc:110319 (ENSAOCG00000004360)	si:dkey-228d14.5 (ENSAOCG00000004352) ##22	eif4e1c (ENSAOCG00000004344)	ENSAOCG00000004330	slc25a16 (ENSAOCG00000004314)	alox5a (ENSAOCG00000004247)	marchf8 (ENSAOCG00000000137)	zfand4 (ENSAOCG00000004025)	ENSAOCG00000000122	ENSAOCG00000003986	ENSAOCG00000002471	marveld1 (ENSAOCG00000003974)	ENSAOCG00000003963
Spiny chromis	MODERN SPECIES	77	lzts2a (ENSAPOG00000018963)	ENSAPOG00000018977	pdzd7a (ENSAPOG00000019047)	sfxn3 (ENSAPOG00000019098)	ENSAPOG00000019112	ENSAPOG00000019122	ENSAPOG00000019168	ENSAPOG00000019189	mat1a (ENSAPOG00000019251)	zgc:154058 (ENSAPOG00000019271) ##22	ENSAPOG00000019280	si:ch211-198a12.6 (ENSAPOG00000019286)	stox1 (ENSAPOG00000019295)	ccar1 (ENSAPOG00000019427)	zgc:110319 (ENSAPOG00000019439)	si:dkey-228d14.5 (ENSAPOG00000019507) ##22	eif4e1c (ENSAPOG00000019534)	ENSAPOG00000019541	slc25a16 (ENSAPOG00000000916)	alox5a (ENSAPOG00000019693)	marchf8 (ENSAPOG00000019743)	zfand4 (ENSAPOG00000019766)	ENSAPOG00000019862	ENSAPOG00000019887	pgam1a (ENSAPOG00000019913)	marveld1 (ENSAPOG00000019923)	ENSAPOG00000019941	zgc:171482 (ENSAPOG00000019970)	sfrp5 (ENSAPOG00000019995)	golga7ba (ENSAPOG00000020032)	ENSAPOG00000020057
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Oryzias	ANCESTRAL SPECIES	6	ENSGT00940000173563	ENSGT00940000153408.A	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00940000157837.c	ENSGT00940000173563	ENSGT00940000153408.A	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Japanese Medaka HdrR	MODERN SPECIES	6	EFEMP1 (ENSORLG00000007168)	ENSORLG00000030354	XPO5 (ENSORLG00000007230)	tp53bp2a (ENSORLG00000007284)	SEMA4G (ENSORLG00000007299)	lzts2a (ENSORLG00000007311)	pdzd7a (ENSORLG00000007317)	sfxn3 (ENSORLG00000007337)	ENSORLG00000007348	mat1a (ENSORLG00000007386)	zgc:154058 (ENSORLG00000007393) ##22	si:ch211-198a12.6 (ENSORLG00000007397)	stox1 (ENSORLG00000026324)	ccar1 (ENSORLG00000007436)	zgc:110319 (ENSORLG00000029904)	si:dkey-228d14.5 (ENSORLG00000019392) ##22	eif4e1c (ENSORLG00000019400)	TET1 (ENSORLG00000026069)	slc25a16 (ENSORLG00000026181)	alox5a (ENSORLG00000007461)	marchf8 (ENSORLG00000007479)	zfand4 (ENSORLG00000007496)	ENSORLG00000007565	ENSORLG00000026750	pgam1a (ENSORLG00000007592)	marveld1 (ENSORLG00000027726)	ENSORLG00000007598	zgc:171482 (ENSORLG00000007607)	sfrp5 (ENSORLG00000007621)	GOLGA7B (ENSORLG00000023120)	CRTAC1 (ENSORLG00000007646)
Chinese medaka	MODERN SPECIES	557	MARK1 (ENSOSIG00000022881)	EFEMP1 (ENSOSIG00000023192)	ENSOSIG00000023202	XPO5 (ENSOSIG00000023223)	tp53bp2a (ENSOSIG00000023290)	SEMA4G (ENSOSIG00000023303)	lzts2a (ENSOSIG00000023306)	pdzd7a (ENSOSIG00000023310)	sfxn3 (ENSOSIG00000023316)	selenou1a (ENSOSIG00000023320)	mat1a (ENSOSIG00000023325)	zgc:154058 (ENSOSIG00000023328) ##22	ENSOSIG00000023333	stox1 (ENSOSIG00000023341)	ccar1 (ENSOSIG00000023348)	si:dkey-228d14.5 (ENSOSIG00000023351) ##22	eif4e1c (ENSOSIG00000003757)	ENSOSIG00000003776	slc25a16 (ENSOSIG00000003791)	alox5a (ENSOSIG00000003843)	marchf8 (ENSOSIG00000005042)	zfand4 (ENSOSIG00000005048)	ENSOSIG00000005053	ENSOSIG00000005055	pgam1a (ENSOSIG00000005056)	marveld1 (ENSOSIG00000005057)	ENSOSIG00000005059	ENSOSIG00000005060	zgc:171482 (ENSOSIG00000005061)	sfrp5 (ENSOSIG00000005063)	golga7ba (ENSOSIG00000005065)
Oryzias_b	ANCESTRAL SPECIES	7	ENSGT00940000157837.c	ENSGT00940000153408.A	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00970000193827	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Javanese ricefish	MODERN SPECIES	6	EFEMP1 (ENSOJAG00000010366)	XPO5 (ENSOJAG00000010478)	tp53bp2a (ENSOJAG00000010699)	SEMA4G (ENSOJAG00000011537)	lzts2a (ENSOJAG00000011631)	pdzd7a (ENSOJAG00000011637)	sfxn3 (ENSOJAG00000011652)	selenou1a (ENSOJAG00000011677)	mat1a (ENSOJAG00000011731)	zgc:154058 (ENSOJAG00000011791) ##22	ENSOJAG00000011794	si:ch211-198a12.6 (ENSOJAG00000011802)	stox1 (ENSOJAG00000011811)	ccar1 (ENSOJAG00000011851)	zgc:110319 (ENSOJAG00000012476)	si:dkey-228d14.5 (ENSOJAG00000012495) ##22	eif4e1c (ENSOJAG00000012509)	TET1 (ENSOJAG00000012552)	slc25a16 (ENSOJAG00000012616)	alox5a (ENSOJAG00000012713)	ENSOJAG00000012795	marchf8 (ENSOJAG00000012830)	zfand4 (ENSOJAG00000012892)	ENSOJAG00000012919	ENSOJAG00000012965	pgam1a (ENSOJAG00000012978)	marveld1 (ENSOJAG00000013004)	ENSOJAG00000013022	zgc:171482 (ENSOJAG00000013050)	sfrp5 (ENSOJAG00000013058)	golga7ba (ENSOJAG00000013072)
Indian medaka	MODERN SPECIES	27	ENSOMEG00000004355	XPO5 (ENSOMEG00000004338)	tp53bp2a (ENSOMEG00000004305)	SEMA4G (ENSOMEG00000004250)	lzts2a (ENSOMEG00000000865)	pdzd7a (ENSOMEG00000004184)	sfxn3 (ENSOMEG00000004157)	selenou1a (ENSOMEG00000004119)	mat1a (ENSOMEG00000004064)	zgc:154058 (ENSOMEG00000004041) ##22	ENSOMEG00000004030	si:ch211-198a12.6 (ENSOMEG00000004023)	stox1 (ENSOMEG00000004013)	ccar1 (ENSOMEG00000003998)	zgc:110319 (ENSOMEG00000003938)	si:dkey-228d14.5 (ENSOMEG00000003916) ##22	eif4e1c (ENSOMEG00000003911)	TET1 (ENSOMEG00000003894)	slc25a16 (ENSOMEG00000003877)	alox5a (ENSOMEG00000003860)	marchf8 (ENSOMEG00000003833)	zfand4 (ENSOMEG00000003785)	ENSOMEG00000003742	ENSOMEG00000003591	pgam1a (ENSOMEG00000003552)	marveld1 (ENSOMEG00000003543)	ENSOMEG00000003536	zgc:171482 (ENSOMEG00000003526)	sfrp5 (ENSOMEG00000003509)	golga7ba (ENSOMEG00000003486)	CRTAC1 (ENSOMEG00000003461)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Aplocheiloidei	ANCESTRAL SPECIES	43	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d	ENSGT00390000013726.c
Mangrove rivulus	MODERN SPECIES	3	ENSKMAG00000003966	XPO5 (ENSKMAG00000004007)	tp53bp2a (ENSKMAG00000004076)	SEMA4G (ENSKMAG00000004117)	lzts2a (ENSKMAG00000004143)	pdzd7a (ENSKMAG00000004152)	sfxn3 (ENSKMAG00000004212)	selenou1a (ENSKMAG00000004253)	mat1a (ENSKMAG00000004294)	zgc:154058 (ENSKMAG00000004343) ##22	ENSKMAG00000004349	si:ch211-198a12.6 (ENSKMAG00000004363)	stox1 (ENSKMAG00000004372)	ccar1 (ENSKMAG00000004397)	zgc:110319 (ENSKMAG00000004521)	si:dkey-228d14.5 (ENSKMAG00000004541) ##22	eif4e1c (ENSKMAG00000004557)	TET1 (ENSKMAG00000004567)	slc25a16 (ENSKMAG00000004595)	alox5a (ENSKMAG00000004642)	marchf8 (ENSKMAG00000004883)	zfand4 (ENSKMAG00000004916)	ENSKMAG00000004942	ENSKMAG00000005005	pgam1a (ENSKMAG00000005032)	marveld1 (ENSKMAG00000005056)	ENSKMAG00000005062	zgc:171482 (ENSKMAG00000005077)
Cyprinodontoidei	ANCESTRAL SPECIES	14	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935.c	ENSGT00940000158935.d	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608
NAME_6	ANCESTRAL SPECIES	25	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00940000177134	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935.c	ENSGT00940000158935.d	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Sailfin molly	MODERN SPECIES	53	XPO5 (ENSPLAG00000009067)	tp53bp2a (ENSPLAG00000009087)	SEMA4G (ENSPLAG00000000191)	lzts2a (ENSPLAG00000009165)	ENSPLAG00000000199	pdzd7a (ENSPLAG00000009209)	sfxn3 (ENSPLAG00000009236)	ENSPLAG00000009258	ENSPLAG00000009276	mat1a (ENSPLAG00000009296)	zgc:154058 (ENSPLAG00000009308) ##22	si:ch211-198a12.6 (ENSPLAG00000009322)	stox1 (ENSPLAG00000009391)	ccar1 (ENSPLAG00000000212)	zgc:110319 (ENSPLAG00000009457)	si:dkey-228d14.5 (ENSPLAG00000009471) ##22	eif4e1c (ENSPLAG00000009606)	ENSPLAG00000009632
Amazon molly	MODERN SPECIES	438	EFEMP1 (ENSPFOG00000005044)	XPO5 (ENSPFOG00000004497)	tp53bp2a (ENSPFOG00000004313)	SEMA4G (ENSPFOG00000004216)	lzts2a (ENSPFOG00000004153)	pdzd7a (ENSPFOG00000004044)	selenou1a (ENSPFOG00000021824)	sfxn3 (ENSPFOG00000003891)	mat1a (ENSPFOG00000003729)	zgc:154058 (ENSPFOG00000003582) ##22	ENSPFOG00000003478	si:ch211-198a12.6 (ENSPFOG00000020636)	stox1 (ENSPFOG00000003435)	ccar1 (ENSPFOG00000003164)	zgc:110319 (ENSPFOG00000003062)	si:dkey-228d14.5 (ENSPFOG00000002941) ##22	eif4e1c (ENSPFOG00000002854)	ENSPFOG00000024349	ENSPFOG00000002780	slc25a16 (ENSPFOG00000002699)	alox5a (ENSPFOG00000002570)	marchf8 (ENSPFOG00000002514)	zfand4 (ENSPFOG00000002464)	ENSPFOG00000002174	ENSPFOG00000002106	pgam1a (ENSPFOG00000002053)	marveld1 (ENSPFOG00000002028)	ENSPFOG00000002027	zgc:171482 (ENSPFOG00000001974)	sfrp5 (ENSPFOG00000001940)	golga7ba (ENSPFOG00000001906)
Guppy	MODERN SPECIES	445	ENSPREG00000017964	XPO5 (ENSPREG00000017998)	tp53bp2a (ENSPREG00000018046)	SEMA4G (ENSPREG00000018115)	lzts2a (ENSPREG00000018138)	pdzd7a (ENSPREG00000018173)	ENSPREG00000018206	sfxn3 (ENSPREG00000018212)	selenou1a (ENSPREG00000018234)	mat1a (ENSPREG00000018253)	zgc:154058 (ENSPREG00000018290) ##22	si:ch211-198a12.6 (ENSPREG00000018311)	stox1 (ENSPREG00000018333)	ccar1 (ENSPREG00000018399)	zgc:110319 (ENSPREG00000018448)	si:dkey-228d14.5 (ENSPREG00000018494) ##22	eif4e1c (ENSPREG00000018571)	ENSPREG00000018976	slc25a16 (ENSPREG00000019024)	alox5a (ENSPREG00000019048)	marchf8 (ENSPREG00000019096)	zfand4 (ENSPREG00000019165)	ENSPREG00000019193	ENSPREG00000019207	ENSPREG00000019215	marveld1 (ENSPREG00000019221)	ENSPREG00000019229	zgc:171482 (ENSPREG00000019241)	sfrp5 (ENSPREG00000019287)	golga7ba (ENSPREG00000019525)	CRTAC1 (ENSPREG00000019532)
Platyfish	MODERN SPECIES	14	SEMA4G (ENSXMAG00000002862)	ENSXMAG00000022640	sgtb (ENSXMAG00000028476)	lzts2a (ENSXMAG00000002857)	pdzd7a (ENSXMAG00000002852)	sfxn3 (ENSXMAG00000002825)	ENSXMAG00000027388	ENSXMAG00000023177	mat1a (ENSXMAG00000002811)	zgc:154058 (ENSXMAG00000022378) ##22	ENSXMAG00000002798	si:ch211-198a12.6 (ENSXMAG00000002795)	stox1 (ENSXMAG00000021387)	ccar1 (ENSXMAG00000002765)	zgc:110319 (ENSXMAG00000002755)	si:dkey-228d14.5 (ENSXMAG00000021405) ##22	eif4e1c (ENSXMAG00000023567)	ENSXMAG00000021487	slc25a16 (ENSXMAG00000002705)	alox5a (ENSXMAG00000002683)	marchf8 (ENSXMAG00000028080)	zfand4 (ENSXMAG00000002677)	ENSXMAG00000002655	ENSXMAG00000002647	pgam1a (ENSXMAG00000002644)	marveld1 (ENSXMAG00000020099)	ENSXMAG00000020097	zgc:171482 (ENSXMAG00000002641)	sfrp5 (ENSXMAG00000002638)	golga7ba (ENSXMAG00000002635)	CRTAC1 (ENSXMAG00000002622)
NAME_4	ANCESTRAL SPECIES	2	ENSGT00940000153463.b.a	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00940000177134	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a.k	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000170691	ENSGT00530000064017.a	ENSGT00950000182926.b.d.a.a.b	ENSGT00510000049375	ENSGT00730000112219	ENSGT00940000165757.d	ENSGT00940000160608	ENSGT00390000000134.a.d
Sheepshead minnow	MODERN SPECIES	113	tp53bp2a (ENSCVAG00000014396)	SEMA4G (ENSCVAG00000014361)	lzts2a (ENSCVAG00000014313)	pdzd7a (ENSCVAG00000014294)	ENSCVAG00000014234	sfxn3 (ENSCVAG00000014222)	ENSCVAG00000014176	ENSCVAG00000014164	mat1a (ENSCVAG00000014150)	zgc:154058 (ENSCVAG00000014126) ##22	ENSCVAG00000014121	si:ch211-198a12.6 (ENSCVAG00000014114)	stox1 (ENSCVAG00000014109)	ccar1 (ENSCVAG00000014095)	zgc:110319 (ENSCVAG00000013925)	si:dkey-228d14.5 (ENSCVAG00000000350) ##22	eif4e1c (ENSCVAG00000013853)	TET1 (ENSCVAG00000013819)	slc25a16 (ENSCVAG00000013805)	alox5a (ENSCVAG00000013780)	marchf8 (ENSCVAG00000013730)	zfand4 (ENSCVAG00000013710)	ENSCVAG00000013705	ENSCVAG00000013672	ENSCVAG00000013659	pgam1a (ENSCVAG00000013643)	marveld1 (ENSCVAG00000013627)	ENSCVAG00000013617	zgc:171482 (ENSCVAG00000013606)	sfrp5 (ENSCVAG00000013587)	golga7ba (ENSCVAG00000013553)
Cod	MODERN SPECIES	6	ENSGMOG00000022891	SEMA4G (ENSGMOG00000013766)	lzts2a (ENSGMOG00000026923)	ENSGMOG00000030524	pdzd7a (ENSGMOG00000036589)	sfxn3 (ENSGMOG00000006881)	ENSGMOG00000006875	selenou1a (ENSGMOG00000027077)	mat1a (ENSGMOG00000006848)	zgc:154058 (ENSGMOG00000031801) ##22	ENSGMOG00000036175	ENSGMOG00000030442	stox1 (ENSGMOG00000034873)	ccar1 (ENSGMOG00000006757)	zgc:110319 (ENSGMOG00000015309)	si:dkey-228d14.5 (ENSGMOG00000006744) ##22	eif4e1c (ENSGMOG00000006731)	ENSGMOG00000029870	alox5a (ENSGMOG00000006677)	marchf8 (ENSGMOG00000006671)	ZFAND4 (ENSGMOG00000006650)	ENSGMOG00000006605	ENSGMOG00000006578	ENSGMOG00000006569	ENSGMOG00000006493	ENSGMOG00000020233	ENSGMOG00000006487	SPRED2 (ENSGMOG00000032899)	ENSGMOG00000025603	C1D (ENSGMOG00000013911)	PNO1 (ENSGMOG00000001448)
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000158282	ENSGT00940000155716	ENSGT00940000153997.b.b	ENSGT00940000156914.o.b	ENSGT00940000155303.l	ENSGT00940000154935.c.a.a.a	ENSGT00950000182946.lb.b.l	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a	ENSGT00390000014618.a.b	ENSGT00390000004409.a.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	420			ENSGT00940000154078.a.a.b.g	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a.h	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.b.b.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00950000183169.C.i	ENSGT00520000055589.c.k	ENSGT00530000063672.a.u	ENSGT00940000166680.d	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166192.a	ENSGT00940000158935.g.b	ENSGT00940000157520.a	ENSGT00940000156111.e	ENSGT00940000158282.b	ENSGT00940000155716.s	ENSGT00940000153997.b.b.c.a	ENSGT00940000156914.o.b.d	ENSGT00940000155303.l.e	ENSGT00940000154935.c.a.a.a	ENSGT00940000153289.a.a.a.c.a	ENSGT00390000014618.a.b.d
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00390000007125.a.c.b	ENSGT00940000157186.d.c	ENSGT00940000154078.a.a.b.g	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C.i	ENSGT00520000055589.c.k	ENSGT00530000063672.a.u	ENSGT00940000166680.d	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166192.a	ENSGT00940000158935.g.b	ENSGT00940000157520.a	ENSGT00940000156111.e	ENSGT00940000158282.b	ENSGT00940000155716.s	ENSGT00940000153997.b.b.c.a	ENSGT00940000156914.o.b.d	ENSGT00940000155303.l.e	ENSGT00940000154935.c.a.a.a	ENSGT00940000153289.a.a.a.d	ENSGT00390000014618.a.b.d	ENSGT00390000004409.a.b.f.b	ENSGT00950000182946.lb.b.l	ENSGT00940000161685.A.b.d
Salmo	ANCESTRAL SPECIES	23	ENSGT00390000007125.a.c.b	ENSGT00940000157186.d.c	ENSGT00940000154078.a.a.b.g	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C.i	ENSGT00520000055589.c.k	ENSGT00530000063672.a.u	ENSGT00940000166680.d	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166192.a	ENSGT00940000158935.g.b	ENSGT00940000157520.a	ENSGT00940000156111.e	ENSGT00940000158282.b	ENSGT00940000155716.s	ENSGT00940000153997.b.b.c.a	ENSGT00940000156914.o.b.d	ENSGT00940000155303.l.e	ENSGT00940000154935.c.a.a.a	ENSGT00940000153289.a.a.a.c.b.b	ENSGT00390000014618.a.b.d	ENSGT00390000004409.a.b.f.b	ENSGT00950000182946.lb.b.l	ENSGT00940000161685.A.b.d
River trout	MODERN SPECIES	9	SEMA4G (ENSSTUG00000029333)	lzts2a (ENSSTUG00000029318)	ENSSTUG00000029315	pdzd7a (ENSSTUG00000029259)	sfxn3 (ENSSTUG00000029232)	ENSSTUG00000029218	ENSSTUG00000029211	ENSSTUG00000029207	mat1a (ENSSTUG00000028919)	zgc:154058 (ENSSTUG00000028903) ##22	ENSSTUG00000028880	si:ch211-198a12.6 (ENSSTUG00000028876)	stox1 (ENSSTUG00000028869)	ccar1 (ENSSTUG00000028760)	zgc:110319 (ENSSTUG00000028714)	si:dkey-228d14.5 (ENSSTUG00000028679) ##22	eif4e1c (ENSSTUG00000028641)	ENSSTUG00000028637	ENSSTUG00000028615	slc25a16 (ENSSTUG00000028586)	alox5a (ENSSTUG00000028501)	marchf8 (ENSSTUG00000028448)	zfand4 (ENSSTUG00000028419)	ENSSTUG00000028254	anxa11a (ENSSTUG00000027203)	dlg5a (ENSSTUG00000026189)	KCNMA1 (ENSSTUG00000011003)	lrmda (ENSSTUG00000010708)	znf503 (ENSSTUG00000010702)	ifit8 (ENSSTUG00000010695)	ENSSTUG00000010689
Atlantic salmon	MODERN SPECIES		ENSSSAG00000000220	SEMA4G (ENSSSAG00000072227)	lzts2a (ENSSSAG00000000152)	pdzd7a (ENSSSAG00000000137)	sfxn3 (ENSSSAG00000069008)	selu (ENSSSAG00000072207)	ENSSSAG00000068999	mat1a (ENSSSAG00000068779)	zgc:154058 (ENSSSAG00000115942) ##22	ENSSSAG00000093869	ENSSSAG00000068740	ENSSSAG00000091634	stox1 (ENSSSAG00000068734)	ccar1 (ENSSSAG00000068710)	zgc:110319 (ENSSSAG00000068703)	si:dkey-228d14.5 (ENSSSAG00000068698) ##22	if4e (ENSSSAG00000068681)	ENSSSAG00000093814	ENSSSAG00000068673	slc25a16 (ENSSSAG00000068658)	alox5a (ENSSSAG00000068637)	marchf8 (ENSSSAG00000101210)	ZFAND4 (ENSSSAG00000068607)	ENSSSAG00000068583	ENSSSAG00000067993	dlg5a (ENSSSAG00000065428)	KCNMA1 (ENSSSAG00000056700)	lrmda (ENSSSAG00000056956)	znf503 (ENSSSAG00000000866)	ENSSSAG00000090023	comtd1 (ENSSSAG00000000851)
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000159115.d	ENSGT00940000157186.d.c	ENSGT00940000154078.a.a.b.g	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000165336.a.a.b	ENSGT00950000183185.c.a.b.a.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C.i	ENSGT00520000055589.c.k	ENSGT00530000063672.a.u	ENSGT00940000166680.d	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166192.a	ENSGT00940000158935.g.b	ENSGT00940000157520.a	ENSGT00940000156111.e	ENSGT00940000158282.b	ENSGT00940000155716.s	ENSGT00940000153997.b.b.c.a	ENSGT00940000156914.o.b.d	ENSGT00940000155303.l.e	ENSGT00940000154935.c.a.a.a	ENSGT00940000153289.a.a.a.d	ENSGT00390000014618.a.b.d	ENSGT00950000182946.lb.b.l	ENSGT00940000161685.A.b.d	ENSGT00950000182869.e.a.a.q.a
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000021772	SEMA4G (ENSOMYG00000021758)	lzts2a (ENSOMYG00000021746)	pdzd7a (ENSOMYG00000021686)	sfxn3 (ENSOMYG00000021614)	selu (ENSOMYG00000053756)	ENSOMYG00000021594	mat1a (ENSOMYG00000020555)	ENSOMYG00000073435	zgc:154058 (ENSOMYG00000054275) ##22	ENSOMYG00000020494	ENSOMYG00000020460	ENSOMYG00000061066	stox1 (ENSOMYG00000020454)	ccar1 (ENSOMYG00000020444)	si:dkey-228d14.5 (ENSOMYG00000020436) ##22	eif4e1c (ENSOMYG00000020415)	ENSOMYG00000056261	ENSOMYG00000020405	ENSOMYG00000040064	slc25a16 (ENSOMYG00000020384)	alox5a (ENSOMYG00000020325)	marchf8 (ENSOMYG00000020278)	ZFAND4 (ENSOMYG00000020255)	ENSOMYG00000020207	ENSOMYG00000024741	anxa11a (ENSOMYG00000020115)	ENSOMYG00000058351	dlg5a (ENSOMYG00000019904)	ENSOMYG00000019831	KCNMA1 (ENSOMYG00000017987)
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000159115.d	ENSGT00940000157186.d.c	ENSGT00940000154078.a.a.b.g	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a.h.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00950000183185.c.a.b.a.a.a	ENSGT01030000234578.A.b.a.a.a.a.b.a.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C.i	ENSGT00520000055589.c.k	ENSGT00530000063672.a.u	ENSGT00940000166680.d	ENSGT01030000234578.A.b.a.b.a ##22	ENSGT00940000166192.a	ENSGT00940000158935.g.b	ENSGT00940000157520.a	ENSGT00940000156111.e	ENSGT00940000158282.b	ENSGT00940000155716.s	ENSGT00940000153997.b.b.c.a	ENSGT00940000156914.o.b.d	ENSGT00940000155303.l.e	ENSGT00940000154935.c.a.a.a	ENSGT00940000153289.a.a.a.c.a	ENSGT00390000014618.a.b.d	ENSGT00950000182946.lb.b.l	ENSGT00940000161685.A.b.d	ENSGT00950000182869.e.a.a.q.a
Coho salmon	MODERN SPECIES	2	ENSOKIG00005002606	SEMA4G (ENSOKIG00005002624)	lzts2a (ENSOKIG00005002678)	pdzd7a (ENSOKIG00005002692)	ENSOKIG00005002716	sfxn3 (ENSOKIG00005002723)	ENSOKIG00005002770	ENSOKIG00005002788	ENSOKIG00005002797	mat1a (ENSOKIG00005002839)	zgc:154058 (ENSOKIG00005003040) ##22	ENSOKIG00005003058	ENSOKIG00005003067	stox1 (ENSOKIG00005003080)	ccar1 (ENSOKIG00005003127)	si:dkey-228d14.5 (ENSOKIG00005003239) ##22	zgc:110319 (ENSOKIG00005003251)	eif4e1c (ENSOKIG00005003254)	ENSOKIG00005003256	slc25a16 (ENSOKIG00005003259)	alox5a (ENSOKIG00005003273)	marchf8 (ENSOKIG00005003320)	zfand4 (ENSOKIG00005003335)	ENSOKIG00005003380	anxa11a (ENSOKIG00005003605)	dlg5a (ENSOKIG00005004590)	KCNMA1 (ENSOKIG00005005490)	ENSOKIG00005016879	ENSOKIG00005016887	ENSOKIG00005016896	ENSOKIG00005016902
Chinook salmon	MODERN SPECIES		ENSOTSG00005034693	ENSOTSG00005034691	SEMA4G (ENSOTSG00005034586)	lzts2a (ENSOTSG00005034581)	pdzd7a (ENSOTSG00005034578)	sfxn3 (ENSOTSG00005034571)	ENSOTSG00005034569	ENSOTSG00005034566	ENSOTSG00005034564	mat1a (ENSOTSG00005034237)	zgc:154058 (ENSOTSG00005034226) ##22	si:ch211-198a12.6 (ENSOTSG00005034224)	stox1 (ENSOTSG00005034222)	ccar1 (ENSOTSG00005034184)	zgc:110319 (ENSOTSG00005034177)	si:dkey-228d14.5 (ENSOTSG00005034176) ##22	eif4e1c (ENSOTSG00005034175)	ENSOTSG00005034172	slc25a16 (ENSOTSG00005034168)	alox5a (ENSOTSG00005033730)	marchf8 (ENSOTSG00005033721)	zfand4 (ENSOTSG00005033714)	ENSOTSG00005033711	anxa11a (ENSOTSG00005033383)	dlg5a (ENSOTSG00005033313)	ENSOTSG00005031370	paxx (ENSOTSG00005031358)	lrmda (ENSOTSG00005031357)	ENSOTSG00005031356	ENSOTSG00005031353	ENSOTSG00005031351
Huchen	MODERN SPECIES	584											ENSHHUG00000024981	si:ch211-198a12.6 (ENSHHUG00000024989)	stox1 (ENSHHUG00000024991)	ccar1 (ENSHHUG00000024998)	zgc:110319 (ENSHHUG00000025024)	si:dkey-228d14.5 (ENSHHUG00000025129) ##22	eif4e1c (ENSHHUG00000025146)	ENSHHUG00000025166	slc25a16 (ENSHHUG00000025179)	alox5a (ENSHHUG00000025204)	marchf8 (ENSHHUG00000025310)	zfand4 (ENSHHUG00000025348)	ENSHHUG00000025359	anxa11a (ENSHHUG00000025401)	dlg5a (ENSHHUG00000025521)	ENSHHUG00000026018
Salmoninae	ANCESTRAL SPECIES	170				ENSGT00950000182977.B.b.b.c.a.a.a.a	ENSGT00940000157186.d.d	ENSGT00940000154078.a.a.b.h	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C.j	ENSGT00520000055589.c.l	ENSGT00530000063672.a.v	ENSGT00940000166680.c	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000157520.b	ENSGT00940000156111.f	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00940000161685.A.b.c	ENSGT00950000182869.e.a.a.q.b
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00390000007125.a.c.a	ENSGT01000000216166.A.a	ENSGT01000000216166.B	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00940000157186.d.d	ENSGT00940000154078.a.a.b.h	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183169.C.j	ENSGT00520000055589.c.l	ENSGT00530000063672.a.v	ENSGT00940000166680.c	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000157520.b	ENSGT00940000156111.f	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00940000161685.A.b.c	ENSGT01070000254141.a.a
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00390000007125.a.c.a	ENSGT01000000216166.A.a.a	ENSGT01000000216166.B	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00940000157186.d.d	ENSGT00940000154078.a.a.b.h	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183169.C.j	ENSGT00520000055589.c.l	ENSGT00530000063672.a.v	ENSGT00940000166680.c	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000157520.b	ENSGT00940000156111.f	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.d	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00390000004409.a.b.f.b
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000161036.B.a.d	ENSGT00390000007125.a.c.a	ENSGT01000000216166.A.a.a	ENSGT01000000216166.B	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT00940000157186.d.d	ENSGT00940000154078.a.a.b.h	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183169.C.j	ENSGT00520000055589.c.l	ENSGT00530000063672.a.v	ENSGT00940000166680.c	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000157520.b	ENSGT00940000156111.f	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.d	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00940000161685.A.b.c
Chinook salmon	MODERN SPECIES	30	papolg (ENSOTSG00005000829)	rx2 (ENSOTSG00005000727)	SLC35F3 (ENSOTSG00005019784)	ENSOTSG00005019782	ENSOTSG00005019781	ENSOTSG00005019780	lgalslb (ENSOTSG00005019778)	ENSOTSG00005019777	sfrp5 (ENSOTSG00005019776)	zgc:123010 (ENSOTSG00005019774)	ENSOTSG00005019773	ENSOTSG00005019772	SEMA4G (ENSOTSG00005019770)	ccar1 (ENSOTSG00005019769)	zgc:110319 (ENSOTSG00005019768)	si:dkey-228d14.5 (ENSOTSG00005019767) ##22	eif4e1c (ENSOTSG00005019764)	ENSOTSG00005019763	alox5a (ENSOTSG00005019757)	marchf8 (ENSOTSG00005019756)	zfand4 (ENSOTSG00005019754)	ENSOTSG00005019752	anxa11a (ENSOTSG00005019303)	dlg5a (ENSOTSG00005018547)	ENSOTSG00005018529	ENSOTSG00005018487	lrmda (ENSOTSG00005018478)	znf503 (ENSOTSG00005018472)	comtd1 (ENSOTSG00005018468)	ENSOTSG00005018457	comtd1 (ENSOTSG00005018453)
Coho salmon	MODERN SPECIES	24	ENSOKIG00005043221	ENSOKIG00005043128	SEMA4G (ENSOKIG00005042959)	ENSOKIG00005042931	lzts2a (ENSOKIG00005042909)	ENSOKIG00005042897	sfxn3 (ENSOKIG00005042841)	selenou1a (ENSOKIG00005042808)	mat1a (ENSOKIG00005042619)	zgc:154058 (ENSOKIG00005042584) ##22	ENSOKIG00005042574	si:ch211-198a12.6 (ENSOKIG00005042563)	stox1 (ENSOKIG00005042556)	ccar1 (ENSOKIG00005042511)	zgc:110319 (ENSOKIG00005042474)	si:dkey-228d14.5 (ENSOKIG00005042464) ##22	eif4e1c (ENSOKIG00005042335)	ENSOKIG00005042316	slc25a16 (ENSOKIG00005042132)	ENSOKIG00005042116	alox5a (ENSOKIG00005041978)	marchf8 (ENSOKIG00005041891)	ZFAND4 (ENSOKIG00005041845)	ENSOKIG00005041833	anxa11a (ENSOKIG00005039615)	dlg5a (ENSOKIG00005038715)	ENSOKIG00005038655	KCNMA1 (ENSOKIG00005026716)	ENSOKIG00005026302	lrmda (ENSOKIG00005026287)	znf503 (ENSOKIG00005026264)
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000161036.B.a.d	ENSGT00390000007125.a.c.a	ENSGT00950000182977.B.b.b.c.a.a.a.b	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.a	ENSGT00950000182977.B.b.b.c.a.a.a.a.c.a.b	ENSGT00940000157186.d.d	ENSGT00940000154078.a.a.b.h	ENSGT01030000234641.b.a.b.a.a.g	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a.b	ENSGT01030000234578.A.b.a.a.a.a.b.a.b ##22	ENSGT00950000183169.C.j	ENSGT00520000055589.c.l	ENSGT00530000063672.a.v	ENSGT00940000166680.c	ENSGT01030000234578.A.b.a.b.b ##22	ENSGT00940000166192.b	ENSGT00940000158935.g.a	ENSGT00940000156111.f.b	ENSGT00940000158282.a	ENSGT00940000155716.t	ENSGT00940000153997.b.b.c.b.a	ENSGT00940000156914.o.b.c	ENSGT00940000155303.l.f	ENSGT00940000154935.c.a.a.b	ENSGT00940000153289.a.a.a.c.b.a	ENSGT00390000014618.a.b.c	ENSGT00390000004409.a.b.f.a	ENSGT00940000161685.A.b.c	ENSGT01070000254141.a.a	ENSGT00390000004409.a.b.e
River trout	MODERN SPECIES	35	ENSSTUG00000022118	ENSSTUG00000022136	ENSSTUG00000022175	ENSSTUG00000022209	ENSSTUG00000022219	SEMA4G (ENSSTUG00000022249)	lzts2a (ENSSTUG00000022528)	sfxn3 (ENSSTUG00000022552)	selenou1a (ENSSTUG00000022578)	mat1a (ENSSTUG00000022642)	zgc:154058 (ENSSTUG00000023670) ##22	si:ch211-198a12.6 (ENSSTUG00000023674)	stox1 (ENSSTUG00000023679)	ccar1 (ENSSTUG00000023705)	zgc:110319 (ENSSTUG00000024127)	si:dkey-228d14.5 (ENSSTUG00000024146) ##22	eif4e1c (ENSSTUG00000024164)	ENSSTUG00000024215	alox5a (ENSSTUG00000024257)	ENSSTUG00000024435	ENSSTUG00000024484	zfand4 (ENSSTUG00000024487)	ENSSTUG00000024503	anxa11a (ENSSTUG00000024612)	dlg5a (ENSSTUG00000027118)	KCNMA1 (ENSSTUG00000027806)	lrmda (ENSSTUG00000029872)	ENSSTUG00000029929	ENSSTUG00000029937	ENSSTUG00000029942	znf503 (ENSSTUG00000029950)
Atlantic salmon	MODERN SPECIES	9	clm7 (ENSSSAG00000072247)	ENSSSAG00000117538	ENSSSAG00000072253	ENSSSAG00000072252	ENSSSAG00000072242	ENSSSAG00000120911	ENSSSAG00000000181	LZTS2 (ENSSSAG00000072215)	sfxn3 (ENSSSAG00000107744)	ENSSSAG00000114295	zgc:154058 (ENSSSAG00000086209) ##22	ENSSSAG00000084997	stox1 (ENSSSAG00000070795)	ccar1 (ENSSSAG00000070723)	zgc:110319 (ENSSSAG00000070714)	si:dkey-228d14.5 (ENSSSAG00000122214) ##22	eif4e1c (ENSSSAG00000070682)	ENSSSAG00000067599	alox5a (ENSSSAG00000067580)	marchf8 (ENSSSAG00000068611)	ZFAND4 (ENSSSAG00000067562)	ENSSSAG00000118353	ENSSSAG00000067557	anxa11a (ENSSSAG00000067234)	dlg5a (ENSSSAG00000063726)	ENSSSAG00000091016	KCNMA1 (ENSSSAG00000057174)	lrmda (ENSSSAG00000109376)	ENSSSAG00000082651	zn503 (ENSSSAG00000056529)	comtd1 (ENSSSAG00000056483)
Huchen	MODERN SPECIES	1560										mat1a (ENSHHUG00000045086)	zgc:154058 (ENSHHUG00000045079) ##22	si:ch211-198a12.6 (ENSHHUG00000045067)	stox1 (ENSHHUG00000045060)	ccar1 (ENSHHUG00000045040)	zgc:110319 (ENSHHUG00000045035)	si:dkey-228d14.5 (ENSHHUG00000045029) ##22	eif4e1c (ENSHHUG00000045027)	ENSHHUG00000045025
Northern pike	MODERN SPECIES	5	ENSELUG00000025061	SEMA4G (ENSELUG00000022195)	lzts2a (ENSELUG00000022213)	pdzd7a (ENSELUG00000022229)	ENSELUG00000032547	sfxn3 (ENSELUG00000022252)	ENSELUG00000009988	ENSELUG00000022335	mat1a (ENSELUG00000022377)	zgc:154058 (ENSELUG00000022409) ##22	ENSELUG00000022418	si:ch211-198a12.6 (ENSELUG00000022430)	stox1 (ENSELUG00000022439)	ccar1 (ENSELUG00000022633)	zgc:110319 (ENSELUG00000022693)	si:dkey-228d14.5 (ENSELUG00000022728) ##22	eif4e1c (ENSELUG00000022791)	ENSELUG00000022830	ENSELUG00000028750	slc25a16 (ENSELUG00000001254)	alox5a (ENSELUG00000022892)	marchf8 (ENSELUG00000022913)	ENSELUG00000026905	zfand4 (ENSELUG00000022926)	ENSELUG00000023002	anxa11a (ENSELUG00000023085)	dlg5a (ENSELUG00000023155)	KCNMA1 (ENSELUG00000023215)	lrmda (ENSELUG00000023237)	znf503 (ENSELUG00000023250)	ENSELUG00000034245
Otomorpha	ANCESTRAL SPECIES	10	ENSGT00940000154078.a.a.b	ENSGT00950000183002.C.c.a	ENSGT00980000198953	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00950000184268
Otophysi	ANCESTRAL SPECIES	29	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00950000184268
Characiphysae	ANCESTRAL SPECIES	13	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d
Characiphysae_b	ANCESTRAL SPECIES	10	ENSGT00940000157186.d	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d
Characoidei	ANCESTRAL SPECIES	5	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000165336.b	ENSGT00940000173380	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00990000210241	ENSGT00940000156323.d	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT01060000252496	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d
Red-bellied piranha	MODERN SPECIES	10											ENSPNAG00000007144	ENSPNAG00000005030	stox1 (ENSPNAG00000004089)	ccar1 (ENSPNAG00000026936)	zgc:110319 (ENSPNAG00000026998)	si:dkey-228d14.5 (ENSPNAG00000004161) ##22	eif4e1c (ENSPNAG00000027050)	TET1 (ENSPNAG00000027062)	slc25a16 (ENSPNAG00000027115)	alox5a (ENSPNAG00000027136)	ENSPNAG00000006862	zfand4 (ENSPNAG00000007097)	marchf8 (ENSPNAG00000027410)	vdac2 (ENSPNAG00000005273)	ENSPNAG00000027469	ifit8 (ENSPNAG00000027476)	comtd1 (ENSPNAG00000027732)	znf503 (ENSPNAG00000027759)	lrmda (ENSPNAG00000004261)	kcnma1a (ENSPNAG00000027930)	ENSPNAG00000027955
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000041591	pdzd7a (ENSAMXG00000002974)	sfxn3 (ENSAMXG00000041542)	ENSAMXG00000002979	ENSAMXG00000030039	mat1a (ENSAMXG00000038208)	zgc:154058 (ENSAMXG00000032149) ##22	ENSAMXG00000003023	ENSAMXG00000031125	ENSAMXG00000039931	ENSAMXG00000040191	si:ch211-198a12.6 (ENSAMXG00000026056)	stox1 (ENSAMXG00000001371)	ccar1 (ENSAMXG00000001383)	zgc:110319 (ENSAMXG00000033105)	si:dkey-228d14.5 (ENSAMXG00000001412) ##22	eif4e1c (ENSAMXG00000029997)	TET1 (ENSAMXG00000001451)	ENSAMXG00000029609	slc25a16 (ENSAMXG00000031377)	alox5a (ENSAMXG00000001474)	ENSAMXG00000001490	zfand4 (ENSAMXG00000040329)	marchf8 (ENSAMXG00000040189)	vdac2 (ENSAMXG00000001543)	ENSAMXG00000040989	ifit8 (ENSAMXG00000032260)	comtd1 (ENSAMXG00000001561)	ENSAMXG00000036643	znf503 (ENSAMXG00000042362)	ENSAMXG00000040919
Electric eel	MODERN SPECIES	461	ENSEEEG00000014848	lzts2a (ENSEEEG00000014847)	ENSEEEG00000014846	pdzd7a (ENSEEEG00000014845)	sfxn3 (ENSEEEG00000014787)	ENSEEEG00000014781	ENSEEEG00000014779	mat1a (ENSEEEG00000014771)	zgc:154058 (ENSEEEG00000014765) ##22	ENSEEEG00000014763	ENSEEEG00000014761	si:ch211-198a12.6 (ENSEEEG00000014759)	stox1 (ENSEEEG00000014758)	ccar1 (ENSEEEG00000014756)	zgc:110319 (ENSEEEG00000014754)	si:dkey-228d14.5 (ENSEEEG00000014753) ##22	eif4e1c (ENSEEEG00000014752)
Channel catfish	MODERN SPECIES	22	ENSIPUG00000005804	SEMA4G (ENSIPUG00000005749)	lzts2 (ENSIPUG00000005737)	ENSIPUG00000005731	pdzd7a (ENSIPUG00000005667)	SFXN1 (ENSIPUG00000005638)	selenou1a (ENSIPUG00000005592)	CKB (ENSIPUG00000005495)	mat1a (ENSIPUG00000005424)	zgc:154058 (ENSIPUG00000005399) ##22	ENSIPUG00000005372	ENSIPUG00000005349	ENSIPUG00000005336	STOX1 (ENSIPUG00000005320)	ccar1 (ENSIPUG00000005123)	si:dkey-228d14.5 (ENSIPUG00000005094) ##22	eif4e1c (ENSIPUG00000005027)	tet1 (ENSIPUG00000005004)	Slc25a16 (ENSIPUG00000004964)	ALOX5 (ENSIPUG00000004930)	Fam21 (ENSIPUG00000004769)	zfand4 (ENSIPUG00000004728)	marchf8 (ENSIPUG00000004619)	ENSIPUG00000004606	ENSIPUG00000004596	ckba (ENSIPUG00000004569)	vdac2 (ENSIPUG00000004553)	ENSIPUG00000004549	ifit8 (ENSIPUG00000004546)	comtd1 (ENSIPUG00000004535)	znf503 (ENSIPUG00000004515)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000154078.a.a.b	ENSGT00980000198953	ENSGT00950000183002.C.c.a	ENSGT01030000234641.b.a.b.a.a	ENSGT00940000164872.b	ENSGT00950000183185.c.a.b.a.a	ENSGT01030000234578.A.b.a.a.a.a.b ##22	ENSGT00940000154395.a.a.a.b	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d.c.a	ENSGT00940000156323.d.c.b	ENSGT00950000183169.C	ENSGT00520000055589.c.g	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111.d	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT00940000153289.a.a.a	ENSGT00950000184268	ENSGT00940000154935.d	ENSGT00940000155303.l
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	87	ENSGT00530000064017.a.d	ENSGT00940000157186.d.a	ENSGT00940000154078.a.a.b.d	ENSGT00980000198953	ENSGT00950000183002.C.c.a.a	ENSGT01030000234641.b.a.b.a.a.b	ENSGT00940000164872.b.b	ENSGT00950000183185.c.a.b.a.a.c	ENSGT01030000234578.A.b.a.a.a.a.b.d ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d.c.a.b	ENSGT00940000156323.d.c.b.b.a	ENSGT00520000055589.c.g.b	ENSGT00530000063672.a.s	ENSGT00940000166680.b	ENSGT01030000234578.A.b.a.b.c ##22	ENSGT00940000166192.c.b	ENSGT00940000158935.b	ENSGT00940000157520.c	ENSGT00940000156111.d.b	ENSGT00940000153997.b.b.b	ENSGT00940000155716.r	ENSGT00940000158282.d.a.b	ENSGT00950000182869.e.a.a.q.d.a	ENSGT00940000161685.A.b.b	ENSGT00950000182946.lb.b.e.a	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b.b	ENSGT00940000153289.a.a.a.b	ENSGT00940000154935.d.c.b	ENSGT00950000184268
Cyprininae_a	ANCESTRAL SPECIES	32	ENSGT00940000157186.d.a	ENSGT00940000154078.a.a.b.d	ENSGT00980000198953	ENSGT00950000183002.C.c.a.a	ENSGT01030000234641.b.a.b.a.a.b	ENSGT00940000164872.b.b	ENSGT00950000183185.c.a.b.a.a.c	ENSGT01030000234578.A.b.a.a.a.a.b.d ##22	ENSGT01100000263516.a.b.b.b.a.a.a.b.b.a.a	ENSGT00940000156323.d.c.a.b	ENSGT00940000156323.d.c.b.b.a	ENSGT00950000183169.C.h	ENSGT00520000055589.c.g.b	ENSGT00530000063672.a.s	ENSGT00940000166680.b	ENSGT01030000234578.A.b.a.b.c ##22	ENSGT00940000166192.c.b	ENSGT00940000158935.b	ENSGT00940000157520.c	ENSGT00940000156111.d.b	ENSGT00940000153997.b.b.b	ENSGT00940000155716.r	ENSGT00940000158282.d.a.b	ENSGT00950000182869.e.a.a.q.d.a	ENSGT00940000161685.A.b.a	ENSGT00950000182946.lb.b.e.a	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b.b	ENSGT01020000230338.a.b.b.a.a.a.b.a.b.a.a.d.b.a	ENSGT00940000153289.a.a.a.b	ENSGT00940000154935.d.c.b
Golden-line barbel	MODERN SPECIES	44	wdr32 (ENSSGRG00000048158)	ENSSGRG00000048154	SEMA4G (ENSSGRG00000048150)	lzts2a (ENSSGRG00000048149)	ENSSGRG00000048144	ENSSGRG00000048143	sfxn3 (ENSSGRG00000048077)	selenou1a (ENSSGRG00000048071)	mat1a (ENSSGRG00000048068)	zgc:154058 (ENSSGRG00000048065) ##22	ENSSGRG00000048063	si:ch211-198a12.6 (ENSSGRG00000048059)	stox1 (ENSSGRG00000048057)	ccar1 (ENSSGRG00000048054)	zgc:110319 (ENSSGRG00000048053)	si:dkey-228d14.5 (ENSSGRG00000048051) ##22	eif4e1c (ENSSGRG00000048035)	ENSSGRG00000048033	alox5a (ENSSGRG00000047929)	ENSSGRG00000047927	zfand4 (ENSSGRG00000047926)	marchf8 (ENSSGRG00000047925)	vdac2 (ENSSGRG00000045875)	ENSSGRG00000045819	ifit8 (ENSSGRG00000045818)	comtd1 (ENSSGRG00000045817)	znf503 (ENSSGRG00000045816)	ENSSGRG00000045814	lrmda (ENSSGRG00000045813)	kcnma1a (ENSSGRG00000043159)	dlg5a (ENSSGRG00000043037)
Common carp reference	MODERN SPECIES	48	ENSCCRG00000012988	pdzd7a (ENSCCRG00000012984)	sfxn3 (ENSCCRG00000067180)	selenou1a (ENSCCRG00000013043)	mat1a (ENSCCRG00000079943)	zgc:154058 (ENSCCRG00000065412) ##22	ENSCCRG00000062444	tlr4bb (ENSCCRG00000056245)	ENSCCRG00000020975	ENSCCRG00000059050	ENSCCRG00000080229	si:ch211-198a12.6 (ENSCCRG00000080952)	stox1 (ENSCCRG00000082714)	ccar1 (ENSCCRG00000013217)	zgc:110319 (ENSCCRG00000074371)	si:dkey-228d14.5 (ENSCCRG00000076991) ##22	eif4e1c (ENSCCRG00000063429)	ENSCCRG00000012373	slc25a16 (ENSCCRG00000011658)	alox5a (ENSCCRG00000077726)	ENSCCRG00000011697	zfand4 (ENSCCRG00000011724)	marchf8 (ENSCCRG00000074268)	vdac2 (ENSCCRG00000001662)	ENSCCRG00000073929	ifit8 (ENSCCRG00000058239)	comtd1 (ENSCCRG00000003211)	znf503 (ENSCCRG00000058222)	ENSCCRG00000011119	ENSCCRG00000061379	lrmda (ENSCCRG00000037087)
Goldfish	MODERN SPECIES	31	lzts2a (ENSCARG00000025309)	pdzd7a (ENSCARG00000025314)	ENSCARG00000025323	sfxn3 (ENSCARG00000025335)	selenou1a (ENSCARG00000025375)	ENSCARG00000025394	mat1a (ENSCARG00000025440)	zgc:154058 (ENSCARG00000026420) ##22	tlr4bb (ENSCARG00000026423)	ENSCARG00000026433	ENSCARG00000026447	ENSCARG00000026461	stox1 (ENSCARG00000026473)	ccar1 (ENSCARG00000026508)	zgc:110319 (ENSCARG00000026798)	si:dkey-228d14.5 (ENSCARG00000026803) ##22	eif4e1c (ENSCARG00000026813)	TET1 (ENSCARG00000026935)	slc25a16 (ENSCARG00000026948)	alox5a (ENSCARG00000027009)	ENSCARG00000027747	zfand4 (ENSCARG00000027775)	marchf8 (ENSCARG00000027821)	vdac2 (ENSCARG00000027913)	ENSCARG00000029201	ifit8 (ENSCARG00000029209)	comtd1 (ENSCARG00000029223)	znf503 (ENSCARG00000029284)	ENSCARG00000029290	lrmda (ENSCARG00000029301)	ENSCARG00000029306
Cyprininae	ANCESTRAL SPECIES	96	ENSGT00940000157186.d.b	ENSGT00940000154078.a.a.b.c	ENSGT00950000183002.C.c.a.b	ENSGT01030000234641.b.a.b.a.a.a	ENSGT00940000164872.b.a	ENSGT00950000183185.c.a.b.a.a.d	ENSGT01030000234578.A.b.a.a.a.a.b.c ##22	ENSGT00940000154395.a.a.a.b	ENSGT00990000210241	ENSGT00940000156323.d.c.a.a	ENSGT00940000156323.d.c.b.b.b	ENSGT00950000183169.C	ENSGT00520000055589.c.g.a	ENSGT00530000063672.a.t	ENSGT00940000166680.a	ENSGT01030000234578.A.b.a.b.d ##22	ENSGT00940000166192.c.a	ENSGT00940000158935.a	ENSGT00940000157520.d	ENSGT00940000156111.d.a	ENSGT00940000153997.b.b.a	ENSGT00940000155716.q	ENSGT00940000158282.d.b	ENSGT00940000158282.d.a.a	ENSGT00950000182869.e.a.a.q.d.b	ENSGT00940000161685.A.b.a	ENSGT00950000182946.lb.b.e.b	ENSGT00390000014618.a.b.a	ENSGT00940000153289.a.a.a.a	ENSGT00940000154935.d.d	ENSGT00940000155303.l.b
Goldfish	MODERN SPECIES	4	ENSCARG00000024064	wdr32 (ENSCARG00000024072)	CPXM1 (ENSCARG00000024094)	ENSCARG00000024433	SEMA4G (ENSCARG00000024461)	lzts2a (ENSCARG00000024778)	sfxn3 (ENSCARG00000024807)	selenou1a (ENSCARG00000024869)	mat1a (ENSCARG00000024910)	zgc:154058 (ENSCARG00000025576) ##22	tlr4bb (ENSCARG00000025587)	si:ch211-198a12.6 (ENSCARG00000025600)	stox1 (ENSCARG00000025606)	ccar1 (ENSCARG00000045370)	zgc:110319 (ENSCARG00000046178)	si:dkey-228d14.5 (ENSCARG00000046193) ##22	eif4e1c (ENSCARG00000046219)	ENSCARG00000046374	slc25a16 (ENSCARG00000046419)	alox5a (ENSCARG00000046461)	ENSCARG00000046670	zfand4 (ENSCARG00000046789)	marchf8 (ENSCARG00000046806)	vdac2 (ENSCARG00000046848)	ENSCARG00000048081	ifit8 (ENSCARG00000048110)	ENSCARG00000048124	znf503 (ENSCARG00000048135)	lrmda (ENSCARG00000048152)	ENSCARG00000048207	ENSCARG00000048216
Cyprininae_a	ANCESTRAL SPECIES	53	ENSGT00940000156141.A	ENSGT00530000064017.a.c	ENSGT00940000157186.d.b	ENSGT00940000154078.a.a.b.c	ENSGT00950000183002.C.c.a.b	ENSGT01030000234641.b.a.b.a.a.a	ENSGT00940000164872.b.a	ENSGT00950000183185.c.a.b.a.a.d	ENSGT01030000234578.A.b.a.a.a.a.b.c ##22	ENSGT00940000154395.a.a.a.b	ENSGT00940000156323.d.c.b.b.b	ENSGT00950000183169.C.g	ENSGT00520000055589.c.g.a	ENSGT00530000063672.a.t	ENSGT00940000166680.a	ENSGT01030000234578.A.b.a.b.d ##22	ENSGT00940000166192.c.a	ENSGT00940000166192.d	ENSGT00940000158935.a	ENSGT00940000157520.d	ENSGT00940000156111.d.a	ENSGT00940000153997.b.b.a	ENSGT00940000155716.q	ENSGT00940000158282.d.b	ENSGT00940000158282.d.a.a	ENSGT00950000182869.e.a.a.q.d.b	ENSGT00950000182946.lb.b.e.b	ENSGT00940000161685.A.b.b	ENSGT00390000014618.a.b.a	ENSGT00940000153289.a.a.a.a	ENSGT00940000154935.d.d
Common carp reference	MODERN SPECIES	18	ENSCCRG00000053090	SEMA4G (ENSCCRG00000011189)	lzts2a (ENSCCRG00000012981)	ENSCCRG00000052637	pdzd7a (ENSCCRG00000005970)	sfxn3 (ENSCCRG00000052638)	selenou1a (ENSCCRG00000028895)	mat1a (ENSCCRG00000056386)	zgc:154058 (ENSCCRG00000062339) ##22	ENSCCRG00000012382	ENSCCRG00000012387	si:ch211-198a12.6 (ENSCCRG00000055010)	stox1 (ENSCCRG00000012492)	ccar1 (ENSCCRG00000012353)	zgc:110319 (ENSCCRG00000081245)	si:dkey-228d14.5 (ENSCCRG00000056104) ##22	eif4e1c (ENSCCRG00000063216)	ENSCCRG00000064054	TET1 (ENSCCRG00000054698)	slc25a16 (ENSCCRG00000003288)	alox5a (ENSCCRG00000060655)	ENSCCRG00000053806	ENSCCRG00000018637	ENSCCRG00000066354	marchf8 (ENSCCRG00000082377)	vdac2 (ENSCCRG00000079836)	ENSCCRG00000003176	ifit8 (ENSCCRG00000003200)	znf503 (ENSCCRG00000080898)	ENSCCRG00000024699	lrmda (ENSCCRG00000063538)
Golden-line barbel	MODERN SPECIES	116												si:ch211-198a12.6 (ENSSGRG00000011692)	stox1 (ENSSGRG00000011693)	ccar1 (ENSSGRG00000011697)	zgc:110319 (ENSSGRG00000011700)	si:dkey-228d14.5 (ENSSGRG00000011723) ##22	eif4e1c (ENSSGRG00000011727)	TET1 (ENSSGRG00000011729)	slc25a16 (ENSSGRG00000011732)	alox5a (ENSSGRG00000011738)	ENSSGRG00000011776	zfand4 (ENSSGRG00000011789)	marchf8 (ENSSGRG00000011807)	vdac2 (ENSSGRG00000011879)	ENSSGRG00000012099	znf503 (ENSSGRG00000012101)	lrmda (ENSSGRG00000012105)	kcnma1a (ENSSGRG00000012273)	dlg5a (ENSSGRG00000019266)	anxa11a (ENSSGRG00000019872)	ENSSGRG00000019909
Zebrafish	MODERN SPECIES	4	eif3s10 (ENSDARG00000076815)	lzts2a (ENSDARG00000074597)	pdzd7a (ENSDARG00000076974)	sfxn3 (ENSDARG00000057374)	selenou1a (ENSDARG00000057378)	mat1a (ENSDARG00000039605)	zgc:154058 (ENSDARG00000069795) ##22	ENSDARG00000078254	tlr4bb (ENSDARG00000022048)	ENSDARG00000112942	tlr4al (ENSDARG00000075671)	tlr4ba (ENSDARG00000019742)	si:ch211-198a12.6 (ENSDARG00000074624)	stox1 (ENSDARG00000062593)	ccar1 (ENSDARG00000074759)	si:dkey-228d14.5 (ENSDARG00000057440) ##22	zgc:110319 (ENSDARG00000021404)	eif4e1c (ENSDARG00000012274)	TET1 (ENSDARG00000075230)	slc25a16 (ENSDARG00000057287)	alox5a (ENSDARG00000057273)	ENSDARG00000062532	zfand4 (ENSDARG00000076703)	ENSDARG00000110724	marchf8 (ENSDARG00000062489)	vdac2 (ENSDARG00000013623)	ENSDARG00000003146	ifit8 (ENSDARG00000057173)	comtd1 (ENSDARG00000078918)	znf503 (ENSDARG00000018492)	lrmda (ENSDARG00000057166)
Clupeiformes	ANCESTRAL SPECIES	8	ENSGT00940000162185	ENSGT00720000108792.A	ENSGT00940000175717	ENSGT00940000162844	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00990000214327	ENSGT00940000161907	ENSGT00950000182936.a.b.a	ENSGT00940000158288	ENSGT00390000004068	ENSGT00950000183169.C	ENSGT00520000055589.c	ENSGT00530000063672.a	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b ##22	ENSGT00940000166192	ENSGT00940000158935	ENSGT00940000157520	ENSGT00940000156111	ENSGT00940000153997.b.b	ENSGT00940000155716	ENSGT00940000158282	ENSGT00950000182869.e.a.a.q.d	ENSGT00940000161685.A.b	ENSGT00950000182946.lb.b	ENSGT00390000004409.a.b	ENSGT00390000014618.a.b	ENSGT00940000153289.a.a.a	ENSGT00940000154935.d	ENSGT00940000155303.l
Denticle herring	MODERN SPECIES	18	ENSDCDG00000004450	MOCOS (ENSDCDG00000004466)	zgc:110045 (ENSDCDG00000004490)	vwc2 (ENSDCDG00000004492)	ENSDCDG00000004494	ikzf1 (ENSDCDG00000004507)	ENSDCDG00000004649	ttl (ENSDCDG00000004654)	fhip2a (ENSDCDG00000004665)	PLPP4 (ENSDCDG00000004726)	wdr11 (ENSDCDG00000004743)	si:ch211-198a12.6 (ENSDCDG00000004751)	stox1 (ENSDCDG00000004754)	ccar1 (ENSDCDG00000004758)	zgc:110319 (ENSDCDG00000004784)	si:dkey-228d14.5 (ENSDCDG00000004790) ##22	eif4e1c (ENSDCDG00000004795)	ENSDCDG00000004802	slc25a16 (ENSDCDG00000004807)	alox5a (ENSDCDG00000004858)	ENSDCDG00000005314	zfand4 (ENSDCDG00000005320)	marchf8 (ENSDCDG00000005325)	vdac2 (ENSDCDG00000005336)	ENSDCDG00000005435	ifit8 (ENSDCDG00000005436)	comtd1 (ENSDCDG00000005438)	znf503 (ENSDCDG00000005441)	lrmda (ENSDCDG00000005444)	kcnma1a (ENSDCDG00000007066)	dlg5a (ENSDCDG00000029091)
Atlantic herring	MODERN SPECIES	4	MOCOS (ENSCHAG00000018708)	zgc:110045 (ENSCHAG00000019196)	vwc2 (ENSCHAG00000019241)	SPATA48 (ENSCHAG00000019249)	ikzf1 (ENSCHAG00000019263)	fignl1 (ENSCHAG00000019351)	ttl (ENSCHAG00000019358)	fhip2a (ENSCHAG00000019387)	ENSCHAG00000019831	PLPP4 (ENSCHAG00000019861)	wdr11 (ENSCHAG00000019878)	si:ch211-198a12.6 (ENSCHAG00000019945)	stox1 (ENSCHAG00000019950)	ccar1 (ENSCHAG00000019967)	zgc:110319 (ENSCHAG00000020522)	si:dkey-228d14.5 (ENSCHAG00000020527) ##22	eif4e1c (ENSCHAG00000020559)	TET1 (ENSCHAG00000020578)	slc25a16 (ENSCHAG00000020593)	alox5a (ENSCHAG00000020632)	ENSCHAG00000021036	zfand4 (ENSCHAG00000021130)	marchf8 (ENSCHAG00000021243)	ENSCHAG00000021340	vdac2 (ENSCHAG00000021357)	ENSCHAG00000021515	comtd1 (ENSCHAG00000021597)	ENSCHAG00000021604	znf503 (ENSCHAG00000021613)	lrmda (ENSCHAG00000021637)	kcnma1a (ENSCHAG00000021725)
Spotted gar	MODERN SPECIES	671	ddx21 (ENSLOCG00000009123)	irf1a (ENSLOCG00000009136)	kifbp (ENSLOCG00000009142)	vps26a (ENSLOCG00000009150)	supv3l1 (ENSLOCG00000009159)	hkdc1 (ENSLOCG00000009177)	hk1 (ENSLOCG00000009187)	tacr2 (ENSLOCG00000009218)	tspan15 (ENSLOCG00000009224)	rufy2 (ENSLOCG00000009235)	HNRNPH3 (ENSLOCG00000009247)	pbld (ENSLOCG00000009266)	DNA2 (ENSLOCG00000009273)	stox1 (ENSLOCG00000009290)	ccar1 (ENSLOCG00000009307)	si:dkey-228d14.5 (ENSLOCG00000009329) ##22	eif4e1c (ENSLOCG00000009334)	ENSLOCG00000009344	alox5b.2 (ENSLOCG00000009354)	marchf8 (ENSLOCG00000009384)	zfand4 (ENSLOCG00000009414)	ENSLOCG00000009434	ENSLOCG00000009449	NPY4R2 (ENSLOCG00000018240)	ENSLOCG00000009464	hells (ENSLOCG00000009470)	ENSLOCG00000009488	ENSLOCG00000009491	ENSLOCG00000009510	ENSLOCG00000009521	macroh2a2 (ENSLOCG00000009542)
Reedfish	MODERN SPECIES	10	kifbp (ENSECRG00000001355)	ENSECRG00000001337	vps26a (ENSECRG00000001311)	supv3l1 (ENSECRG00000001267)	hkdc1 (ENSECRG00000000955)	hk1 (ENSECRG00000000761)	tacr2 (ENSECRG00000000715)	tspan15 (ENSECRG00000000699)	rufy2 (ENSECRG00000000679)	ENSECRG00000000634	pbld (ENSECRG00000000603)	DNA2 (ENSECRG00000000579)	stox1 (ENSECRG00000008343)	ccar1 (ENSECRG00000008235)	zgc:110319 (ENSECRG00000008183)	si:dkey-228d14.5 (ENSECRG00000008170) ##22	eif4e1c (ENSECRG00000008157)	ENSECRG00000008137	slc25a16 (ENSECRG00000008124)	alox5b.2 (ENSECRG00000008107)	marchf8 (ENSECRG00000008078)	zfand4 (ENSECRG00000008056)	ENSECRG00000008007	NPY4R2 (ENSECRG00000007981)	ENSECRG00000007969	ENSECRG00000007936	PKD2L1 (ENSECRG00000007914)	atoh7 (ENSECRG00000007901)	ATOH7 (ENSECRG00000007894)	MYPN (ENSECRG00000007869)	HERC4 (ENSECRG00000007826)
Elephant shark	MODERN SPECIES	1488	marchf8 (ENSCMIG00000009826)	ENSCMIG00000009829	ENSCMIG00000009839	ghitm (ENSCMIG00000009858)	chst3a (ENSCMIG00000009861)	ENSCMIG00000009866	cuedc2 (ENSCMIG00000009870)	fbxl15 (ENSCMIG00000009873)	ENSCMIG00000009878	hif1an (ENSCMIG00000009892)	ndufb8 (ENSCMIG00000009905)	SEC31B (ENSCMIG00000009933)	wnt8b (ENSCMIG00000009971)	scd (ENSCMIG00000009975)	ENSCMIG00000009979 ##22	ENSCMIG00000009980 ##22	ENSCMIG00000009982	ENSCMIG00000009985	pald1b (ENSCMIG00000009988)
Cyclostomata	ANCESTRAL SPECIES	1281															ENSGT01030000234578.A.b.a.a ##22	ENSGT01030000234578.A.b.a.b ##22
Hagfish	MODERN SPECIES	1050	ENSEBUG00000007538	ENSEBUG00000008695	ENSEBUG00000005691	ENSEBUG00000000809	kcnma1a (ENSEBUG00000016358)	ENSEBUG00000016414	ENSEBUG00000014977	qtrt1 (ENSEBUG00000005878)	uba52 (ENSEBUG00000003268)	ENSEBUG00000005577	ENSEBUG00000010683	ENSEBUG00000007529	ENSEBUG00000006878	SCD5 (ENSEBUG00000003421)	ENSEBUG00000012514 ##22	ENSEBUG00000014381 ##22	ENSEBUG00000007198