Glires	ANCESTRAL SPECIES	27	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35
Rodentia	ANCESTRAL SPECIES	25	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35
Rodentia_B	ANCESTRAL SPECIES	38	ENSGT00940000161663 #7	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Myomorpha	ANCESTRAL SPECIES	44	ENSGT00940000161663 #7	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Muroidea	ANCESTRAL SPECIES	49	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Muroidea_A	ANCESTRAL SPECIES	29	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Murinae	ANCESTRAL SPECIES	34	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Rat	MODERN SPECIES		Sbk2 (ENSRNOG00000038625) #7	Ssc5d (ENSRNOG00000016687) #8	Nat14 (ENSRNOG00000038622) #9	Nat14 (ENSRNOG00000067958) #10	LOC684792 (ENSRNOG00000069979) #11	Isoc2a (ENSRNOG00000050348) #12	Isoc2b (ENSRNOG00000016829) #13	Shisa7 (ENSRNOG00000016877) #14	Ube2s (ENSRNOG00000016930) #15	Rpl28 (ENSRNOG00000017127) #16	Tmem238 (ENSRNOG00000070914) #17	Tmem190 (ENSRNOG00000042528) #18	Il11 (ENSRNOG00000017386) #19	Garin5b (ENSRNOG00000033173) #20	Kmt5c (ENSRNOG00000017508) #21	Tmem150b (ENSRNOG00000028273) #22	Brsk1 (ENSRNOG00000017673) #23	Hspbp1 (ENSRNOG00000017795) #24	Ptprh (ENSRNOG00000058906) #25	Syt5 (ENSRNOG00000018217) #26	Dnaaf3 (ENSRNOG00000038600) #27	Tnni3 (ENSRNOG00000018250) #28	Tnnt1 (ENSRNOG00000028041) #29	Ppp1r12c (ENSRNOG00000053828) #30	Eps8l1 (ENSRNOG00000027942) #31	Rdh13 (ENSRNOG00000027919) #32	ENSRNOG00000062480 #33	Gp6 (ENSRNOG00000047204) #34	Nlrp2 (ENSRNOG00000049759) #35	Ncr1 (ENSRNOG00000027855) #36	ENSRNOG00000066198 #37
Mus	ANCESTRAL SPECIES		ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##36
Mus_B	ANCESTRAL SPECIES		ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##36
Mouse	MODERN SPECIES	16	Ssc5d (ENSMUSG00000035279) #8	Nat14 (ENSMUSG00000035285) #10	Zfp628 (ENSMUSG00000074406) #9	Gm36210 (ENSMUSG00000110221) #11	Isoc2a (ENSMUSG00000086784) #12	Isoc2b (ENSMUSG00000052605) #13	Shisa7 (ENSMUSG00000053550) #14	Ube2s (ENSMUSG00000060860) #15	Rpl28 (ENSMUSG00000030432) ##16	Tmem238 (ENSMUSG00000030431) #17	Tmem190 (ENSMUSG00000013091) #18	Il11 (ENSMUSG00000004371) #19	Garin5b (ENSMUSG00000092518) #20	Cox6b2 (ENSMUSG00000051811)	Kmt5c (ENSMUSG00000059851) #21	Tmem150b (ENSMUSG00000046456) #22	Brsk1 (ENSMUSG00000035390) #23	Hspbp1 (ENSMUSG00000063802) #24	Ppp6r1 (ENSMUSG00000052296)	Tmem86b (ENSMUSG00000045282)	Ptprh (ENSMUSG00000035429) #25	Syt5 (ENSMUSG00000004961) #26	Dnaaf3 (ENSMUSG00000055809) #27	Tnni3 (ENSMUSG00000035458) #28	Tnnt1 (ENSMUSG00000064179) #29	Ppp1r12c (ENSMUSG00000019254) #30	Eps8l1 (ENSMUSG00000006154) #31	Rdh13 (ENSMUSG00000008435) #32	Gp6 (ENSMUSG00000078810) #34	Ncr1 (ENSMUSG00000062524) #36	Lilra5 (ENSMUSG00000070873) ##36
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a ##36
spretus	MODERN SPECIES	16	Sbk2 (MGP_SPRETEiJ_G0030191) #7	Ssc5d (MGP_SPRETEiJ_G0030190) #8	Nat14 (MGP_SPRETEiJ_G0030189) #10	Zfp628 (MGP_SPRETEiJ_G0030188) #9	Isoc2a (MGP_SPRETEiJ_G0030187) #12	Isoc2b (MGP_SPRETEiJ_G0030186) #13	Shisa7 (MGP_SPRETEiJ_G0030185) #14	MGP_SPRETEiJ_G0030184 #15	Rpl28 (MGP_SPRETEiJ_G0030183) ##16	Tmem238 (MGP_SPRETEiJ_G0030182) #17	Tmem190 (MGP_SPRETEiJ_G0030181) #18	Il11 (MGP_SPRETEiJ_G0030180) #19	Garin5b (MGP_SPRETEiJ_G0030179) #20	Cox6b2 (MGP_SPRETEiJ_G0030178)	Kmt5c (MGP_SPRETEiJ_G0030177) #21	Tmem150b (MGP_SPRETEiJ_G0030176) #22	Brsk1 (MGP_SPRETEiJ_G0030175) #23	Hspbp1 (MGP_SPRETEiJ_G0030174) #24	Ppp6r1 (MGP_SPRETEiJ_G0030173)	Tmem86b (MGP_SPRETEiJ_G0030172)	MGP_SPRETEiJ_G0030171 #25	Syt5 (MGP_SPRETEiJ_G0030170) #26	Dnaaf3 (MGP_SPRETEiJ_G0030169) #27	Tnni3 (MGP_SPRETEiJ_G0030168) #28	Tnnt1 (MGP_SPRETEiJ_G0030167) #29	Ppp1r12c (MGP_SPRETEiJ_G0030166) #30	Eps8l1 (MGP_SPRETEiJ_G0030165) #31	Rdh13 (MGP_SPRETEiJ_G0030164) #32	Gp6 (MGP_SPRETEiJ_G0030163) #34	Ncr1 (MGP_SPRETEiJ_G0030162) #36	Lilra5 (MGP_SPRETEiJ_G0030161) ##36
Steppe mouse	MODERN SPECIES	2558						ENSMSIG00000001790 #13	Shisa7 (ENSMSIG00000001835) #14	ENSMSIG00000001918 #15	Rpl28 (ENSMSIG00000001946) ##16	Tmem238 (ENSMSIG00000001964) #17	Tmem190 (ENSMSIG00000001978) #18	Il11 (ENSMSIG00000002035) #19	Garin5b (ENSMSIG00000002061) #20	ENSMSIG00000002138	Kmt5c (ENSMSIG00000002231) #21	Tmem150b (ENSMSIG00000002314) #22	Brsk1 (ENSMSIG00000002411) #23	Hspbp1 (ENSMSIG00000002668) #24	Ppp6r1 (ENSMSIG00000002691)	ENSMSIG00000002750	Tmem86b (ENSMSIG00000002765)	ENSMSIG00000002795 #25	Syt5 (ENSMSIG00000002866) #26	Dnaaf3 (ENSMSIG00000002922) #27	ENSMSIG00000002977 #28	Tnnt1 (ENSMSIG00000003052) #29	Ppp1r12c (ENSMSIG00000003464) #30	Eps8l1 (ENSMSIG00000003576) #31	Rdh13 (ENSMSIG00000003759) #32	ENSMSIG00000003796	Gp6 (ENSMSIG00000003816) #34
Ryukyu mouse	MODERN SPECIES	16	Sbk2 (MGP_CAROLIEiJ_G0029138) #7	Ssc5d (MGP_CAROLIEiJ_G0029137) #8	Nat14 (MGP_CAROLIEiJ_G0029136) #10	Zfp628 (MGP_CAROLIEiJ_G0029135) #9	Isoc2a (MGP_CAROLIEiJ_G0029134) #12	Isoc2b (MGP_CAROLIEiJ_G0029133) #13	Shisa7 (MGP_CAROLIEiJ_G0029132) #14	MGP_CAROLIEiJ_G0029131 #15	Rpl28 (MGP_CAROLIEiJ_G0029130) ##16	Tmem238 (MGP_CAROLIEiJ_G0029129) #17	Tmem190 (MGP_CAROLIEiJ_G0029128) #18	Il11 (MGP_CAROLIEiJ_G0029127) #19	Garin5b (MGP_CAROLIEiJ_G0029126) #20	Cox6b2 (MGP_CAROLIEiJ_G0029125)	Kmt5c (MGP_CAROLIEiJ_G0029124) #21	Tmem150b (MGP_CAROLIEiJ_G0029123) #22	Brsk1 (MGP_CAROLIEiJ_G0029122) #23	Hspbp1 (MGP_CAROLIEiJ_G0029121) #24	Ppp6r1 (MGP_CAROLIEiJ_G0029120)	Tmem86b (MGP_CAROLIEiJ_G0029119)	Syt5 (MGP_CAROLIEiJ_G0029117) #26	MGP_CAROLIEiJ_G0029116 #27	Tnni3 (MGP_CAROLIEiJ_G0029115) #28	Tnnt1 (MGP_CAROLIEiJ_G0029114) #29	Ppp1r12c (MGP_CAROLIEiJ_G0029113) #30	Eps8l1 (MGP_CAROLIEiJ_G0029112) #31	MGP_CAROLIEiJ_G0029111 #32	MGP_CAROLIEiJ_G0029110 #34	Ncr1 (MGP_CAROLIEiJ_G0029109) #36	MGP_CAROLIEiJ_G0029108 ##36	Cdc42ep5 (MGP_CAROLIEiJ_G0029107)
Shrew mouse	MODERN SPECIES	10	Sbk3 (MGP_PahariEiJ_G0021007)	Sbk2 (MGP_PahariEiJ_G0021006) #7	Ssc5d (MGP_PahariEiJ_G0021005) #8	Nat14 (MGP_PahariEiJ_G0021004) #10	Zfp628 (MGP_PahariEiJ_G0021003) #9	Isoc2b (MGP_PahariEiJ_G0021002) #13	Shisa7 (MGP_PahariEiJ_G0021001) #14	MGP_PahariEiJ_G0021000 #15	Rpl28 (MGP_PahariEiJ_G0020999) ##16	Tmem238 (MGP_PahariEiJ_G0020998) #17	Tmem190 (MGP_PahariEiJ_G0020997) #18	Il11 (MGP_PahariEiJ_G0020996) #19	Garin5b (MGP_PahariEiJ_G0020995) #20	Cox6b2 (MGP_PahariEiJ_G0020994)	Kmt5c (MGP_PahariEiJ_G0020993) #21	Tmem150b (MGP_PahariEiJ_G0020992) #22	Brsk1 (MGP_PahariEiJ_G0020991) #23	Hspbp1 (MGP_PahariEiJ_G0020990) #24	Ppp6r1 (MGP_PahariEiJ_G0020989)	Tmem86b (MGP_PahariEiJ_G0020988)	MGP_PahariEiJ_G0020987 #25	Syt5 (MGP_PahariEiJ_G0020986) #26	MGP_PahariEiJ_G0020985 #27	Tnni3 (MGP_PahariEiJ_G0020984) #28	Tnnt1 (MGP_PahariEiJ_G0020983) #29	Ppp1r12c (MGP_PahariEiJ_G0020982) #30	Eps8l1 (MGP_PahariEiJ_G0020981) #31	MGP_PahariEiJ_G0020980 #32	Gp6 (MGP_PahariEiJ_G0020979) #34	Nlrp2 (MGP_PahariEiJ_G0020978) #35	Ncr1 (MGP_PahariEiJ_G0020977) #36
Cricetidae	ANCESTRAL SPECIES	32	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a.a ##36
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	41	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b.m #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b ##36
Golden Hamster	MODERN SPECIES	780	Sbk2 (ENSMAUG00000017604) #7	Ssc5d (ENSMAUG00000005073) #8	Nat14 (ENSMAUG00000001020) #10	Zfp628 (ENSMAUG00000003007) #9	Gm36210 (ENSMAUG00000000539) #11	Isoc2a (ENSMAUG00000015826) #12	Isoc2b (ENSMAUG00000014693) #13	Shisa7 (ENSMAUG00000019580) #14	ENSMAUG00000013530 #15	ENSMAUG00000021147 ##16	Tmem190 (ENSMAUG00000012404) #18	Il11 (ENSMAUG00000011999) #19	Garin5b (ENSMAUG00000008250) #20	Cox6b2 (ENSMAUG00000015631)	Kmt5c (ENSMAUG00000017071) #21	Tmem150b (ENSMAUG00000010769) #22	Brsk1 (ENSMAUG00000021219) #23	Hspbp1 (ENSMAUG00000011739) #24	ENSMAUG00000017712	Tmem86b (ENSMAUG00000001471)	ENSMAUG00000001061 #25	ENSMAUG00000006393	Syt5 (ENSMAUG00000021598) #26	ENSMAUG00000007012	Dnaaf3 (ENSMAUG00000008314) #27	Tnni3 (ENSMAUG00000015860) #28	Tnnt1 (ENSMAUG00000020911) #29	Ppp1r12c (ENSMAUG00000021347) #30	ENSMAUG00000019917 #31	ENSMAUG00000017155 #31	Rdh13 (ENSMAUG00000008074) #32
Chinese hamster chok1gshd	MODERN SPECIES	291	ENSCGRG00001018494	Ncr1 (ENSCGRG00001018023) #36	Gp6 (ENSCGRG00001017468) #34	Rdh13 (ENSCGRG00001000111) #32	Eps8l1 (ENSCGRG00001016460) #31	Ppp1r12c (ENSCGRG00001014724) #30	Tnnt1 (ENSCGRG00001007905) #29	Tnni3 (ENSCGRG00001001291) #28	Syt5 (ENSCGRG00001000314) #26	Dnaaf3 (ENSCGRG00001022238) #27	ENSCGRG00001021207 #25	Tmem86b (ENSCGRG00001020804)	Ppp6r1 (ENSCGRG00001017539)	Hspbp1 (ENSCGRG00001016579) #24	ENSCGRG00001010604 #23	ENSCGRG00001010330 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001009751 #22	Kmt5c (ENSCGRG00001006665) #21	Cox6b2 (ENSCGRG00001005078)	Garin5b (ENSCGRG00001003270) #20	Il11 (ENSCGRG00001001006) #19	Tmem190 (ENSCGRG00001000742) #18	Tmem238 (ENSCGRG00001015349) #17	Rpl28 (ENSCGRG00001023644) ##16	ENSCGRG00001023450 #15	Shisa7 (ENSCGRG00001023119) #14	Isoc2b (ENSCGRG00001001738) #13	Isoc2a (ENSCGRG00001021232) #12	Gm36210 (ENSCGRG00001020139) #11	Zfp628 (ENSCGRG00001019468) #9
Cricetinae	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b.n #22
Chinese hamster chok1gshd	MODERN SPECIES	291	Ssc5d (ENSCGRG00001015562) #8	Nat14 (ENSCGRG00001018762) #10	Zfp628 (ENSCGRG00001019468) #9	Gm36210 (ENSCGRG00001020139) #11	Isoc2a (ENSCGRG00001021232) #12	Isoc2b (ENSCGRG00001001738) #13	Shisa7 (ENSCGRG00001023119) #14	ENSCGRG00001023450 #15	Rpl28 (ENSCGRG00001023644) ##16	Tmem238 (ENSCGRG00001015349) #17	Tmem190 (ENSCGRG00001000742) #18	Il11 (ENSCGRG00001001006) #19	Garin5b (ENSCGRG00001003270) #20	Cox6b2 (ENSCGRG00001005078)	Kmt5c (ENSCGRG00001006665) #21	ENSCGRG00001009751 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001010330 #22	ENSCGRG00001010604 #23	Hspbp1 (ENSCGRG00001016579) #24	Ppp6r1 (ENSCGRG00001017539)	Tmem86b (ENSCGRG00001020804)	ENSCGRG00001021207 #25	Dnaaf3 (ENSCGRG00001022238) #27	Syt5 (ENSCGRG00001000314) #26	Tnni3 (ENSCGRG00001001291) #28	Tnnt1 (ENSCGRG00001007905) #29	Ppp1r12c (ENSCGRG00001014724) #30	Eps8l1 (ENSCGRG00001016460) #31	Rdh13 (ENSCGRG00001000111) #32	Gp6 (ENSCGRG00001017468) #34
Cricetidae_B	ANCESTRAL SPECIES	52	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A.e #12	ENSGT00390000006753.A.f #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.e.a.a ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.a.a.a.b #36
Northern American deer mouse	MODERN SPECIES		Zfp579 (ENSPEMG00000023581)	Sbk3 (ENSPEMG00000015238)	Sbk2 (ENSPEMG00000023715) #7	Ssc5d (ENSPEMG00000024246) #8	Nat14 (ENSPEMG00000026040) #10	Zfp628 (ENSPEMG00000009113) #9	Gm36210 (ENSPEMG00000007566) #11	Isoc2a (ENSPEMG00000011522) #12	Isoc2b (ENSPEMG00000023204) #13	ENSPEMG00000018016 #15	Rpl28 (ENSPEMG00000011755) ##16	Tmem190 (ENSPEMG00000017246) #18	Il11 (ENSPEMG00000016289) #19	ENSPEMG00000023825	Kmt5c (ENSPEMG00000023982) #21	Tmem150b (ENSPEMG00000001799) #22	Brsk1 (ENSPEMG00000013836) #23	Hspbp1 (ENSPEMG00000000260) #24	Ppp6r1 (ENSPEMG00000009931)	Tmem86b (ENSPEMG00000028554)	Hif3a (ENSPEMG00000017981)	Ppp5c (ENSPEMG00000012984)	Ccdc8 (ENSPEMG00000012412)	Pnma8a (ENSPEMG00000006770)	Pnma8b (ENSPEMG00000025557)	Calm3 (ENSPEMG00000027101)	Ptgir (ENSPEMG00000016407)	Gng8 (ENSPEMG00000015160)	Dact3 (ENSPEMG00000016882)	Prkd2 (ENSPEMG00000016539)	Strn4 (ENSPEMG00000008347)
Prairie vole	MODERN SPECIES	130	Ssc5d (ENSMOCG00000013013) #8	Nat14 (ENSMOCG00000002976) #10	Zfp628 (ENSMOCG00000020296) #9	Gm36210 (ENSMOCG00000008673) #11	Isoc2a (ENSMOCG00000000175) #12	Isoc2b (ENSMOCG00000014429) #13	Shisa7 (ENSMOCG00000002160) #14	ENSMOCG00000002346 #15	Rpl28 (ENSMOCG00000006245) ##16	Tmem238 (ENSMOCG00000000051) #17	Tmem190 (ENSMOCG00000000461) #18	Il11 (ENSMOCG00000012859) #19	ENSMOCG00000019215 #20	Cox6b2 (ENSMOCG00000007830)	Kmt5c (ENSMOCG00000013978) #21	Tmem150b (ENSMOCG00000006716) #22	Brsk1 (ENSMOCG00000012734) #23	Hspbp1 (ENSMOCG00000016855) #24	Ppp6r1 (ENSMOCG00000021392)	Tmem86b (ENSMOCG00000007183)	Syt5 (ENSMOCG00000015939) #26	Dnaaf3 (ENSMOCG00000018937) #27	Tnni3 (ENSMOCG00000003904) #28	Tnnt1 (ENSMOCG00000016771) #29	Ppp1r12c (ENSMOCG00000021994) #30	ENSMOCG00000019191 #31	Rdh13 (ENSMOCG00000001774) #32	ENSMOCG00000006750	Gp6 (ENSMOCG00000005915) #34	Ncr1 (ENSMOCG00000015667) #36	ENSMOCG00000010977 ##36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1343	ENSNGAG00000014744	Ssc5d (ENSNGAG00000011192) #8	Nat14 (ENSNGAG00000011835) #10	Zfp628 (ENSNGAG00000012888) #9	Gm36210 (ENSNGAG00000014245) #11	Isoc2a (ENSNGAG00000016018) #12	Isoc2b (ENSNGAG00000003558) #13	Shisa7 (ENSNGAG00000008607) #14	ENSNGAG00000012718 #15	ENSNGAG00000016459 #16	Tmem238 (ENSNGAG00000018226) #17	Tmem190 (ENSNGAG00000020448) #18	Il11 (ENSNGAG00000020282) #19	Cox6b2 (ENSNGAG00000000236)	Kmt5c (ENSNGAG00000002716) #21	ENSNGAG00000008679 #22	Brsk1 (ENSNGAG00000011472) #23	Hspbp1 (ENSNGAG00000017292) #24	ENSNGAG00000000503	Tmem86b (ENSNGAG00000006434)	Ptprh (ENSNGAG00000018436) #25	Syt5 (ENSNGAG00000005623) #26	Dnaaf3 (ENSNGAG00000007936) #27	Tnni3 (ENSNGAG00000010137) #28	Tnnt1 (ENSNGAG00000005191) #29	Ppp1r12c (ENSNGAG00000015614) #30	ENSNGAG00000018836 #31	ENSNGAG00000000920 #31	Rdh13 (ENSNGAG00000001835) #32	ENSNGAG00000002403
Lesser Egyptian jerboa	MODERN SPECIES	249							ENSJJAG00000002909 #13	Shisa7 (ENSJJAG00000000151) #14	ENSJJAG00000019857 #15	Rpl28 (ENSJJAG00000019841) #16	Tmem190 (ENSJJAG00000019474) #18	Il11 (ENSJJAG00000018984) #19	ENSJJAG00000018518 #20	Cox6b2 (ENSJJAG00000001150)	Kmt5c (ENSJJAG00000000222) #21	Tmem150b (ENSJJAG00000023317) #22	Brsk1 (ENSJJAG00000021973) #23	Hspbp1 (ENSJJAG00000020815) #24	ENSJJAG00000020637	Tmem86b (ENSJJAG00000020487)	Ptprh (ENSJJAG00000015231) #25	Syt5 (ENSJJAG00000014748) #26	Dnaaf3 (ENSJJAG00000013059) #27	Tnni3 (ENSJJAG00000011375) #28	Tnnt1 (ENSJJAG00000014149) #29	Ppp1r12c (ENSJJAG00000010783) #30	ENSJJAG00000009977 #31	ENSJJAG00000008371 #31	Gp6 (ENSJJAG00000003429) #34	Ncr1 (ENSJJAG00000001068) #36
Kangaroo rat	MODERN SPECIES	508	Zfp865 (ENSDORG00000023200)	ENSDORG00000003689	ENSDORG00000025623	Sbk2 (ENSDORG00000000880) #7	Ssc5d (ENSDORG00000000879) #8	Nat14 (ENSDORG00000000878) #10	Zfp628 (ENSDORG00000000876) #9	ENSDORG00000012815 #13	Shisa7 (ENSDORG00000026157) #14	ENSDORG00000012810 #15	Rpl28 (ENSDORG00000012809) #16	Tmem190 (ENSDORG00000012807) #18	Il11 (ENSDORG00000012806) #19	Cox6b2 (ENSDORG00000012804)	Kmt5c (ENSDORG00000027615) #21	Tmem150b (ENSDORG00000012800) #22	Brsk1 (ENSDORG00000012799) #23	Hspbp1 (ENSDORG00000012796) #24	ENSDORG00000005202	Tmem86b (ENSDORG00000005200)	Syt5 (ENSDORG00000011579) #26	Dnaaf3 (ENSDORG00000011578) #27	Tnni3 (ENSDORG00000011574) #28	Tnnt1 (ENSDORG00000011568) #29	Ppp1r12c (ENSDORG00000008039) #30	Eps8l1 (ENSDORG00000008033) #31	Rdh13 (ENSDORG00000008030) #32
Rodentia_A	ANCESTRAL SPECIES	28	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35
Sciuridae	ANCESTRAL SPECIES	39	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00390000008732.a.b ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35
Marmotini	ANCESTRAL SPECIES	48	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00390000008732.a.b ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000161714.b #35
Marmotini_b	ANCESTRAL SPECIES	114	ENSGT00940000162592 #8	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b #16	ENSGT00390000008732.a.b ##16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00940000162969	ENSGT00390000010577
Arctic ground squirrel	MODERN SPECIES	843																TMEM150B (ENSUPAG00010017185) #22	BRSK1 (ENSUPAG00010017191) #23	HSPBP1 (ENSUPAG00010017248) #24	PPP6R1 (ENSUPAG00010017251)	TMEM86B (ENSUPAG00010017288)	ENSUPAG00010017293 #25	SYT5 (ENSUPAG00010017305) #26	DNAAF3 (ENSUPAG00010017309) #27	TNNI3 (ENSUPAG00010017324) #28	TNNT1 (ENSUPAG00010017329) #29	PPP1R12C (ENSUPAG00010017337) #30	EPS8L1 (ENSUPAG00010017482) #31	RDH13 (ENSUPAG00010017533) #32	ENSUPAG00010017540 ##36	ENSUPAG00010017581 #35
Squirrel	MODERN SPECIES	484				SBK2 (ENSSTOG00000019463) #7	SSC5D (ENSSTOG00000006925) #8	NAT14 (ENSSTOG00000012301) #10	ZNF628 (ENSSTOG00000026126) #9	C19orf85 (ENSSTOG00000034379) #11	ISOC2 (ENSSTOG00000015685) #13	SHISA7 (ENSSTOG00000020184) #14	UBE2S (ENSSTOG00000023187) #15	RPL28 (ENSSTOG00000008006) #16	TMEM190 (ENSSTOG00000026466) #18	IL11 (ENSSTOG00000000690) #19	KMT5C (ENSSTOG00000000678) #21	TMEM150B (ENSSTOG00000005815) #22	BRSK1 (ENSSTOG00000005773) #23	HSPBP1 (ENSSTOG00000020717) #24	PPP6R1 (ENSSTOG00000015925)	TMEM86B (ENSSTOG00000031469)	ENSSTOG00000025588 #25	SYT5 (ENSSTOG00000029144) #26	DNAAF3 (ENSSTOG00000005561) #27	TNNI3 (ENSSTOG00000005538) #28	TNNT1 (ENSSTOG00000025995) #29	PPP1R12C (ENSSTOG00000008693) #30	EPS8L1 (ENSSTOG00000023803) #31	RDH13 (ENSSTOG00000001121) #32	ENSSTOG00000027491 #34	ENSSTOG00000019926	LENG8 (ENSSTOG00000028830)
Alpin marmot	MODERN SPECIES	104	ZNF581 (ENSMMMG00000001405)	ZNF784 (ENSMMMG00000001421)	ENSMMMG00000001452	ZNF524 (ENSMMMG00000001464)	SBK2 (ENSMMMG00000001514) #7	ENSMMMG00000001536 #8	NAT14 (ENSMMMG00000001549) #10	C19orf85 (ENSMMMG00000001567) #11	ISOC2 (ENSMMMG00000001585) #13	UBE2S (ENSMMMG00000001622) #15	RPL28 (ENSMMMG00000001659) #16	IL11 (ENSMMMG00000001672) #19	ENSMMMG00000001685	COX6B2 (ENSMMMG00000001696)	KMT5C (ENSMMMG00000001728) #21	TMEM150B (ENSMMMG00000001781) #22	ENSMMMG00000001801	ENSMMMG00000001815 #23	HSPBP1 (ENSMMMG00000001839) #24	PPP6R1 (ENSMMMG00000001858)	TMEM86B (ENSMMMG00000001911)	ENSMMMG00000001933 #25	DNAAF3 (ENSMMMG00000001951) #27	TNNI3 (ENSMMMG00000001999) #28	TNNT1 (ENSMMMG00000002017) #29	PPP1R12C (ENSMMMG00000002082) #30	EPS8L1 (ENSMMMG00000002374) #31	RDH13 (ENSMMMG00000002466) #32	ENSMMMG00000002480 ##36	ENSMMMG00000002483 #34	ENSMMMG00000002488 #34
Eurasian red squirrel	MODERN SPECIES	8	SSC5D (ENSSVLG00005023992) #8	NAT14 (ENSSVLG00005023966) #10	ZNF628 (ENSSVLG00005023955) #9	C19orf85 (ENSSVLG00005023926) #11	ISOC2 (ENSSVLG00005023878) #13	SHISA7 (ENSSVLG00005023839) #14	UBE2S (ENSSVLG00005023806) #15	TMEM238 (ENSSVLG00005023792) #17	RPL28 (ENSSVLG00005023771) #16	TMEM190 (ENSSVLG00005023734) #18	IL11 (ENSSVLG00005023677) #19	ENSSVLG00005023651	ENSSVLG00005023607 #20	COX6B2 (ENSSVLG00005023567)	KMT5C (ENSSVLG00005023510) #21	TMEM150B (ENSSVLG00005023454) #22	BRSK1 (ENSSVLG00005023255) #23	HSPBP1 (ENSSVLG00005023210) #24	PPP6R1 (ENSSVLG00005023166)	TMEM86B (ENSSVLG00005023109)	ENSSVLG00005023056	PTPRH (ENSSVLG00005022817) #25	SYT5 (ENSSVLG00005022694) #26	DNAAF3 (ENSSVLG00005022610) #27	TNNI3 (ENSSVLG00005022449) #28	TNNT1 (ENSSVLG00005022059) #29	PPP1R12C (ENSSVLG00005021865) #30	EPS8L1 (ENSSVLG00005021551) #31	ENSSVLG00005021428 #32	ENSSVLG00005021353 #32	ENSSVLG00005021319
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162592 #8	ENSGT01000000216607	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00940000162592 #8	ENSGT01000000216607	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #9	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b #16	ENSGT00940000162720.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Guinea pig	MODERN SPECIES	70				NAT14 (ENSCPOG00000004948) #10	ZNF628 (ENSCPOG00000036775) #9	C19orf85 (ENSCPOG00000036337) #11	ISOC2 (ENSCPOG00000014834) #13	SHISA7 (ENSCPOG00000036738) #14	UBE2S (ENSCPOG00000012837) #15	ENSCPOG00000012833 #16	TMEM238 (ENSCPOG00000019669) #17	TMEM190 (ENSCPOG00000015468) #18	IL11 (ENSCPOG00000009123) #19	COX6B2 (ENSCPOG00000009105)	KMT5C (ENSCPOG00000009102) #21	TMEM150B (ENSCPOG00000039123) #22	BRSK1 (ENSCPOG00000009088) #23	HSPBP1 (ENSCPOG00000030758) #24	PPP6R1 (ENSCPOG00000021924)	TMEM86B (ENSCPOG00000009709)	ENSCPOG00000026559 #25	SYT5 (ENSCPOG00000009084) #26	DNAAF3 (ENSCPOG00000009082) #27	TNNI3 (ENSCPOG00000020449) #28	TNNT1 (ENSCPOG00000022114) #29	PPP1R12C (ENSCPOG00000027133) #30	ENSCPOG00000006835 #31	RDH13 (ENSCPOG00000012153) #32	NCR1 (ENSCPOG00000001319) #36	ENSCPOG00000007412 ##36	ENSCPOG00000030847 ##36
Hystricomorpha_b	ANCESTRAL SPECIES	88	ENSGT00940000162592 #8	ENSGT01000000216607	ENSGT00910000144307 #9	ENSGT00950000182932.A.b.b #10	ENSGT00850000133583 #11	ENSGT00390000006753.A #13	ENSGT00940000162254 #14	ENSGT00940000157149 #15	ENSGT00390000008732.a.a.b.a.b #16	ENSGT00390000008732.a.a.b.b #16	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150 #20	ENSGT00940000162621	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c	ENSGT00390000007101.d.a	ENSGT00940000162227 #25	ENSGT00940000161816 #26	ENSGT00390000002069 #27	ENSGT01030000234588.b.b.b.b.b #28	ENSGT00940000160609 #29	ENSGT00940000161425 #30	ENSGT00940000158125 #31	ENSGT00940000159641 #32	ENSGT01100000263478.b.a.b.a #34	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.c ##36	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.d.a.a ##36
Long-tailed chinchilla	MODERN SPECIES	274	ENSCLAG00000000471	ENSCLAG00000000506	SBK2 (ENSCLAG00000000598) #7	SSC5D (ENSCLAG00000000276) #8	ZNF628 (ENSCLAG00000000533) #9	NAT14 (ENSCLAG00000000540) #10	ISOC2 (ENSCLAG00000000572) #13	ENSCLAG00000000623 #14	UBE2S (ENSCLAG00000000649) #15	RPL28 (ENSCLAG00000000684) #16	TMEM190 (ENSCLAG00000000703) #18	IL11 (ENSCLAG00000000724) #19	ENSCLAG00000000763 #20	COX6B2 (ENSCLAG00000000892)	KMT5C (ENSCLAG00000000904) #21	TMEM150B (ENSCLAG00000000936) #22	BRSK1 (ENSCLAG00000000981) #23	HSPBP1 (ENSCLAG00000000510) #24	PPP6R1 (ENSCLAG00000000725)	TMEM86B (ENSCLAG00000000569)	ENSCLAG00000000594 #25	SYT5 (ENSCLAG00000000778) #26	DNAAF3 (ENSCLAG00000000382) #27	TNNI3 (ENSCLAG00000000516) #28	TNNT1 (ENSCLAG00000000706) #29	PPP1R12C (ENSCLAG00000000907) #30	EPS8L1 (ENSCLAG00000000411) #31	RDH13 (ENSCLAG00000001660) #32	ENSCLAG00000001076 #34	ENSCLAG00000001196 #34	ENSCLAG00000001529 ##36
Degu	MODERN SPECIES	361	ZNF579 (ENSODEG00000013209)	ENSODEG00000010550	SBK2 (ENSODEG00000010236) #7	SSC5D (ENSODEG00000009970) #8	ENSODEG00000010952	ZNF628 (ENSODEG00000009941) #9	SHISA7 (ENSODEG00000010663) #14	C19orf85 (ENSODEG00000011049) #11	ISOC2 (ENSODEG00000010105) #13	ENSODEG00000011615 #15	ENSODEG00000010391 #16	TMEM190 (ENSODEG00000009911) #18	IL11 (ENSODEG00000010163) #19	COX6B2 (ENSODEG00000010701)	KMT5C (ENSODEG00000010521) #21	TMEM150B (ENSODEG00000010863) #22	BRSK1 (ENSODEG00000014498) #23	HSPBP1 (ENSODEG00000010633) #24	ENSODEG00000011540	TMEM86B (ENSODEG00000011909)	ENSODEG00000012643 #25	SYT5 (ENSODEG00000011988) #26	DNAAF3 (ENSODEG00000010996) #27	TNNI3 (ENSODEG00000011412) #28	TNNT1 (ENSODEG00000010639) #29	PPP1R12C (ENSODEG00000010142) #30	EPS8L1 (ENSODEG00000011275) #31	RDH13 (ENSODEG00000011963) #32	ENSODEG00000020005	ENSODEG00000012519 #36
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000049682	ZNF524 (ENSHGLG00000042863)	FIZ1 (ENSHGLG00000049423)	ENSHGLG00000050249	ENSHGLG00000015309	SBK2 (ENSHGLG00000035076) #7	ENSHGLG00000035277	NAT14 (ENSHGLG00000033788) #10	ISOC2 (ENSHGLG00000036834) #13	ENSHGLG00000034906 #15	RPL28 (ENSHGLG00000040310) #16	TMEM238 (ENSHGLG00000042230) #17	IL11 (ENSHGLG00000039159) #19	COX6B2 (ENSHGLG00000043169)	KMT5C (ENSHGLG00000046126) #21	ENSHGLG00000014752 #22	ENSHGLG00000048831	ENSHGLG00000004906 #23	ENSHGLG00000040140 #23	ENSHGLG00000049528 #24	ENSHGLG00000043133	ENSHGLG00000044106	ENSHGLG00000015452	ENSHGLG00000016036 #25	SYT5 (ENSHGLG00000015144) #26	ENSHGLG00000016420 #27	TNNI3 (ENSHGLG00000035434) #28	TNNT1 (ENSHGLG00000009790) #29	ENSHGLG00000047300 #30	ENSHGLG00000045855 #30	ENSHGLG00000009349 #31
Lagomorpha	ANCESTRAL SPECIES	581																ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23
Rabbit	MODERN SPECIES	1279																TMEM150B (ENSOCUG00000012773) #22	BRSK1 (ENSOCUG00000012750) #23
Pika	MODERN SPECIES	2611																TMEM150B (ENSOPRG00000017244) #22