Glires	ANCESTRAL SPECIES	27	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b
Rodentia	ANCESTRAL SPECIES	25	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b
Rodentia_B	ANCESTRAL SPECIES	38	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Myomorpha	ANCESTRAL SPECIES	44	ENSGT00940000161663 #9	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Muroidea	ANCESTRAL SPECIES	49	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Muroidea_A	ANCESTRAL SPECIES	29	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Cricetidae	ANCESTRAL SPECIES	32	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a.a
Cricetidae_B	ANCESTRAL SPECIES	52	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b
Northern American deer mouse	MODERN SPECIES		Zfp579 (ENSPEMG00000023581) #7	Sbk3 (ENSPEMG00000015238) #8	Sbk2 (ENSPEMG00000023715) #9	Ssc5d (ENSPEMG00000024246) #10	Nat14 (ENSPEMG00000026040) #11	Zfp628 (ENSPEMG00000009113) #12	Gm36210 (ENSPEMG00000007566) #13	Isoc2a (ENSPEMG00000011522) #14	Isoc2b (ENSPEMG00000023204) #15	ENSPEMG00000018016 #16	Rpl28 (ENSPEMG00000011755) #17	Tmem190 (ENSPEMG00000017246) #18	Il11 (ENSPEMG00000016289) #19	ENSPEMG00000023825 #20	Kmt5c (ENSPEMG00000023982) #21	Tmem150b (ENSPEMG00000001799) #22	Brsk1 (ENSPEMG00000013836) #23	Hspbp1 (ENSPEMG00000000260) #24	Ppp6r1 (ENSPEMG00000009931) #25	Tmem86b (ENSPEMG00000028554) #26	Hif3a (ENSPEMG00000017981) #27	Ppp5c (ENSPEMG00000012984) #28	Ccdc8 (ENSPEMG00000012412) #29	Pnma8a (ENSPEMG00000006770) #30	Pnma8b (ENSPEMG00000025557) #31	Calm3 (ENSPEMG00000027101) #32	Ptgir (ENSPEMG00000016407) #33	Gng8 (ENSPEMG00000015160) #34	Dact3 (ENSPEMG00000016882) #35	Prkd2 (ENSPEMG00000016539) #36	Strn4 (ENSPEMG00000008347) #37
Prairie vole	MODERN SPECIES	130	Ssc5d (ENSMOCG00000013013) #10	Nat14 (ENSMOCG00000002976) #11	Zfp628 (ENSMOCG00000020296) #12	Gm36210 (ENSMOCG00000008673) #13	Isoc2a (ENSMOCG00000000175) #14	Isoc2b (ENSMOCG00000014429) #15	Shisa7 (ENSMOCG00000002160)	ENSMOCG00000002346 #16	Rpl28 (ENSMOCG00000006245) #17	Tmem238 (ENSMOCG00000000051)	Tmem190 (ENSMOCG00000000461) #18	Il11 (ENSMOCG00000012859) #19	ENSMOCG00000019215	Cox6b2 (ENSMOCG00000007830) #20	Kmt5c (ENSMOCG00000013978) #21	Tmem150b (ENSMOCG00000006716) #22	Brsk1 (ENSMOCG00000012734) #23	Hspbp1 (ENSMOCG00000016855) #24	Ppp6r1 (ENSMOCG00000021392) #25	Tmem86b (ENSMOCG00000007183) #26	Syt5 (ENSMOCG00000015939)	Dnaaf3 (ENSMOCG00000018937)	Tnni3 (ENSMOCG00000003904)	Tnnt1 (ENSMOCG00000016771)	Ppp1r12c (ENSMOCG00000021994)	ENSMOCG00000019191	Rdh13 (ENSMOCG00000001774)	ENSMOCG00000006750	Gp6 (ENSMOCG00000005915)	Ncr1 (ENSMOCG00000015667)	ENSMOCG00000010977
Cricetinae	DUPLICATION
Cricetinae	ANCESTRAL SPECIES	41	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b.m #22	ENSGT00940000161254.c #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.b
Golden Hamster	MODERN SPECIES	780	Sbk2 (ENSMAUG00000017604) #9	Ssc5d (ENSMAUG00000005073) #10	Nat14 (ENSMAUG00000001020) #11	Zfp628 (ENSMAUG00000003007) #12	Gm36210 (ENSMAUG00000000539) #13	Isoc2a (ENSMAUG00000015826) #14	Isoc2b (ENSMAUG00000014693) #15	Shisa7 (ENSMAUG00000019580)	ENSMAUG00000013530 #16	ENSMAUG00000021147 #17	Tmem190 (ENSMAUG00000012404) #18	Il11 (ENSMAUG00000011999) #19	Garin5b (ENSMAUG00000008250)	Cox6b2 (ENSMAUG00000015631) #20	Kmt5c (ENSMAUG00000017071) #21	Tmem150b (ENSMAUG00000010769) #22	Brsk1 (ENSMAUG00000021219) #23	Hspbp1 (ENSMAUG00000011739) #24	ENSMAUG00000017712 #25	Tmem86b (ENSMAUG00000001471) #26	ENSMAUG00000001061	ENSMAUG00000006393	Syt5 (ENSMAUG00000021598)	ENSMAUG00000007012	Dnaaf3 (ENSMAUG00000008314)	Tnni3 (ENSMAUG00000015860)	Tnnt1 (ENSMAUG00000020911)	Ppp1r12c (ENSMAUG00000021347)	ENSMAUG00000019917	ENSMAUG00000017155	Rdh13 (ENSMAUG00000008074)
Chinese hamster chok1gshd	MODERN SPECIES	291	ENSCGRG00001018494	Ncr1 (ENSCGRG00001018023)	Gp6 (ENSCGRG00001017468)	Rdh13 (ENSCGRG00001000111)	Eps8l1 (ENSCGRG00001016460)	Ppp1r12c (ENSCGRG00001014724)	Tnnt1 (ENSCGRG00001007905)	Tnni3 (ENSCGRG00001001291)	Syt5 (ENSCGRG00001000314)	Dnaaf3 (ENSCGRG00001022238)	ENSCGRG00001021207	Tmem86b (ENSCGRG00001020804) #26	Ppp6r1 (ENSCGRG00001017539) #25	Hspbp1 (ENSCGRG00001016579) #24	ENSCGRG00001010604 ##23	ENSCGRG00001010330 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001009751 #22	Kmt5c (ENSCGRG00001006665) #21	Cox6b2 (ENSCGRG00001005078) #20	Garin5b (ENSCGRG00001003270)	Il11 (ENSCGRG00001001006) #19	Tmem190 (ENSCGRG00001000742) #18	Tmem238 (ENSCGRG00001015349)	Rpl28 (ENSCGRG00001023644) #17	ENSCGRG00001023450 #16	Shisa7 (ENSCGRG00001023119)	Isoc2b (ENSCGRG00001001738) #15	Isoc2a (ENSCGRG00001021232) #14	Gm36210 (ENSCGRG00001020139) #13	Zfp628 (ENSCGRG00001019468) #12
Cricetinae	ANCESTRAL SPECIES																	ENSGT01030000234578.A.b.b.n #22
Chinese hamster chok1gshd	MODERN SPECIES	291	Ssc5d (ENSCGRG00001015562) #10	Nat14 (ENSCGRG00001018762) #11	Zfp628 (ENSCGRG00001019468) #12	Gm36210 (ENSCGRG00001020139) #13	Isoc2a (ENSCGRG00001021232) #14	Isoc2b (ENSCGRG00001001738) #15	Shisa7 (ENSCGRG00001023119)	ENSCGRG00001023450 #16	Rpl28 (ENSCGRG00001023644) #17	Tmem238 (ENSCGRG00001015349)	Tmem190 (ENSCGRG00001000742) #18	Il11 (ENSCGRG00001001006) #19	Garin5b (ENSCGRG00001003270)	Cox6b2 (ENSCGRG00001005078) #20	Kmt5c (ENSCGRG00001006665) #21	ENSCGRG00001009751 #22	Brsk1 (ENSCGRG00001010166) #23	ENSCGRG00001010330 #22	ENSCGRG00001010604 ##23	Hspbp1 (ENSCGRG00001016579) #24	Ppp6r1 (ENSCGRG00001017539) #25	Tmem86b (ENSCGRG00001020804) #26	ENSCGRG00001021207	Dnaaf3 (ENSCGRG00001022238)	Syt5 (ENSCGRG00001000314)	Tnni3 (ENSCGRG00001001291)	Tnnt1 (ENSCGRG00001007905)	Ppp1r12c (ENSCGRG00001014724)	Eps8l1 (ENSCGRG00001016460)	Rdh13 (ENSCGRG00001000111)	Gp6 (ENSCGRG00001017468)
Murinae	ANCESTRAL SPECIES	34	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Mus	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b	ENSGT01100000263478.b.a.b.b.a.a.a.b
Mus_A	ANCESTRAL SPECIES	1	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a
Mus_B	ANCESTRAL SPECIES		ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a
Mouse	MODERN SPECIES	16	Ssc5d (ENSMUSG00000035279) #10	Nat14 (ENSMUSG00000035285) #11	Zfp628 (ENSMUSG00000074406) #12	Gm36210 (ENSMUSG00000110221) #13	Isoc2a (ENSMUSG00000086784) #14	Isoc2b (ENSMUSG00000052605) #15	Shisa7 (ENSMUSG00000053550)	Ube2s (ENSMUSG00000060860) #16	Rpl28 (ENSMUSG00000030432) #17	Tmem238 (ENSMUSG00000030431)	Tmem190 (ENSMUSG00000013091) #18	Il11 (ENSMUSG00000004371) #19	Garin5b (ENSMUSG00000092518)	Cox6b2 (ENSMUSG00000051811) #20	Kmt5c (ENSMUSG00000059851) #21	Tmem150b (ENSMUSG00000046456) #22	Brsk1 (ENSMUSG00000035390) #23	Hspbp1 (ENSMUSG00000063802) #24	Ppp6r1 (ENSMUSG00000052296) #25	Tmem86b (ENSMUSG00000045282) #26	Ptprh (ENSMUSG00000035429)	Syt5 (ENSMUSG00000004961)	Dnaaf3 (ENSMUSG00000055809)	Tnni3 (ENSMUSG00000035458)	Tnnt1 (ENSMUSG00000064179)	Ppp1r12c (ENSMUSG00000019254)	Eps8l1 (ENSMUSG00000006154)	Rdh13 (ENSMUSG00000008435)	Gp6 (ENSMUSG00000078810)	Ncr1 (ENSMUSG00000062524)	Lilra5 (ENSMUSG00000070873)
Mus_C	ANCESTRAL SPECIES	15	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A.e #14	ENSGT00390000006753.A.f #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.e.a.a #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.a.a.a.b	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.a
spretus	MODERN SPECIES	16	Sbk2 (MGP_SPRETEiJ_G0030191) #9	Ssc5d (MGP_SPRETEiJ_G0030190) #10	Nat14 (MGP_SPRETEiJ_G0030189) #11	Zfp628 (MGP_SPRETEiJ_G0030188) #12	Isoc2a (MGP_SPRETEiJ_G0030187) #14	Isoc2b (MGP_SPRETEiJ_G0030186) #15	Shisa7 (MGP_SPRETEiJ_G0030185)	MGP_SPRETEiJ_G0030184 #16	Rpl28 (MGP_SPRETEiJ_G0030183) #17	Tmem238 (MGP_SPRETEiJ_G0030182)	Tmem190 (MGP_SPRETEiJ_G0030181) #18	Il11 (MGP_SPRETEiJ_G0030180) #19	Garin5b (MGP_SPRETEiJ_G0030179)	Cox6b2 (MGP_SPRETEiJ_G0030178) #20	Kmt5c (MGP_SPRETEiJ_G0030177) #21	Tmem150b (MGP_SPRETEiJ_G0030176) #22	Brsk1 (MGP_SPRETEiJ_G0030175) #23	Hspbp1 (MGP_SPRETEiJ_G0030174) #24	Ppp6r1 (MGP_SPRETEiJ_G0030173) #25	Tmem86b (MGP_SPRETEiJ_G0030172) #26	MGP_SPRETEiJ_G0030171	Syt5 (MGP_SPRETEiJ_G0030170)	Dnaaf3 (MGP_SPRETEiJ_G0030169)	Tnni3 (MGP_SPRETEiJ_G0030168)	Tnnt1 (MGP_SPRETEiJ_G0030167)	Ppp1r12c (MGP_SPRETEiJ_G0030166)	Eps8l1 (MGP_SPRETEiJ_G0030165)	Rdh13 (MGP_SPRETEiJ_G0030164)	Gp6 (MGP_SPRETEiJ_G0030163)	Ncr1 (MGP_SPRETEiJ_G0030162)	Lilra5 (MGP_SPRETEiJ_G0030161)
Steppe mouse	MODERN SPECIES	2558						ENSMSIG00000001790 #15	Shisa7 (ENSMSIG00000001835)	ENSMSIG00000001918 #16	Rpl28 (ENSMSIG00000001946) #17	Tmem238 (ENSMSIG00000001964)	Tmem190 (ENSMSIG00000001978) #18	Il11 (ENSMSIG00000002035) #19	Garin5b (ENSMSIG00000002061)	ENSMSIG00000002138 #20	Kmt5c (ENSMSIG00000002231) #21	Tmem150b (ENSMSIG00000002314) #22	Brsk1 (ENSMSIG00000002411) #23	Hspbp1 (ENSMSIG00000002668) #24	Ppp6r1 (ENSMSIG00000002691) #25	ENSMSIG00000002750	Tmem86b (ENSMSIG00000002765) #26	ENSMSIG00000002795	Syt5 (ENSMSIG00000002866)	Dnaaf3 (ENSMSIG00000002922)	ENSMSIG00000002977	Tnnt1 (ENSMSIG00000003052)	Ppp1r12c (ENSMSIG00000003464)	Eps8l1 (ENSMSIG00000003576)	Rdh13 (ENSMSIG00000003759)	ENSMSIG00000003796	Gp6 (ENSMSIG00000003816)
Ryukyu mouse	MODERN SPECIES	16	Sbk2 (MGP_CAROLIEiJ_G0029138) #9	Ssc5d (MGP_CAROLIEiJ_G0029137) #10	Nat14 (MGP_CAROLIEiJ_G0029136) #11	Zfp628 (MGP_CAROLIEiJ_G0029135) #12	Isoc2a (MGP_CAROLIEiJ_G0029134) #14	Isoc2b (MGP_CAROLIEiJ_G0029133) #15	Shisa7 (MGP_CAROLIEiJ_G0029132)	MGP_CAROLIEiJ_G0029131 #16	Rpl28 (MGP_CAROLIEiJ_G0029130) #17	Tmem238 (MGP_CAROLIEiJ_G0029129)	Tmem190 (MGP_CAROLIEiJ_G0029128) #18	Il11 (MGP_CAROLIEiJ_G0029127) #19	Garin5b (MGP_CAROLIEiJ_G0029126)	Cox6b2 (MGP_CAROLIEiJ_G0029125) #20	Kmt5c (MGP_CAROLIEiJ_G0029124) #21	Tmem150b (MGP_CAROLIEiJ_G0029123) #22	Brsk1 (MGP_CAROLIEiJ_G0029122) #23	Hspbp1 (MGP_CAROLIEiJ_G0029121) #24	Ppp6r1 (MGP_CAROLIEiJ_G0029120) #25	Tmem86b (MGP_CAROLIEiJ_G0029119) #26	Syt5 (MGP_CAROLIEiJ_G0029117)	MGP_CAROLIEiJ_G0029116	Tnni3 (MGP_CAROLIEiJ_G0029115)	Tnnt1 (MGP_CAROLIEiJ_G0029114)	Ppp1r12c (MGP_CAROLIEiJ_G0029113)	Eps8l1 (MGP_CAROLIEiJ_G0029112)	MGP_CAROLIEiJ_G0029111	MGP_CAROLIEiJ_G0029110	Ncr1 (MGP_CAROLIEiJ_G0029109)	MGP_CAROLIEiJ_G0029108	Cdc42ep5 (MGP_CAROLIEiJ_G0029107)
Shrew mouse	MODERN SPECIES	10	Sbk3 (MGP_PahariEiJ_G0021007) #8	Sbk2 (MGP_PahariEiJ_G0021006) #9	Ssc5d (MGP_PahariEiJ_G0021005) #10	Nat14 (MGP_PahariEiJ_G0021004) #11	Zfp628 (MGP_PahariEiJ_G0021003) #12	Isoc2b (MGP_PahariEiJ_G0021002) #15	Shisa7 (MGP_PahariEiJ_G0021001)	MGP_PahariEiJ_G0021000 #16	Rpl28 (MGP_PahariEiJ_G0020999) ##17	Tmem238 (MGP_PahariEiJ_G0020998)	Tmem190 (MGP_PahariEiJ_G0020997) #18	Il11 (MGP_PahariEiJ_G0020996) #19	Garin5b (MGP_PahariEiJ_G0020995)	Cox6b2 (MGP_PahariEiJ_G0020994) #20	Kmt5c (MGP_PahariEiJ_G0020993) #21	Tmem150b (MGP_PahariEiJ_G0020992) #22	Brsk1 (MGP_PahariEiJ_G0020991) #23	Hspbp1 (MGP_PahariEiJ_G0020990) #24	Ppp6r1 (MGP_PahariEiJ_G0020989) #25	Tmem86b (MGP_PahariEiJ_G0020988) #26	MGP_PahariEiJ_G0020987	Syt5 (MGP_PahariEiJ_G0020986)	MGP_PahariEiJ_G0020985	Tnni3 (MGP_PahariEiJ_G0020984)	Tnnt1 (MGP_PahariEiJ_G0020983)	Ppp1r12c (MGP_PahariEiJ_G0020982)	Eps8l1 (MGP_PahariEiJ_G0020981)	MGP_PahariEiJ_G0020980	Gp6 (MGP_PahariEiJ_G0020979)	Nlrp2 (MGP_PahariEiJ_G0020978)	Ncr1 (MGP_PahariEiJ_G0020977)
Rat	MODERN SPECIES		Sbk2 (ENSRNOG00000038625) #9	Ssc5d (ENSRNOG00000016687) #10	Nat14 (ENSRNOG00000038622) #12	Nat14 (ENSRNOG00000067958) #11	LOC684792 (ENSRNOG00000069979) #13	Isoc2a (ENSRNOG00000050348) #14	Isoc2b (ENSRNOG00000016829) #15	Shisa7 (ENSRNOG00000016877)	Ube2s (ENSRNOG00000016930) #16	Rpl28 (ENSRNOG00000017127) ##17	Tmem238 (ENSRNOG00000070914)	Tmem190 (ENSRNOG00000042528) #18	Il11 (ENSRNOG00000017386) #19	Garin5b (ENSRNOG00000033173)	Kmt5c (ENSRNOG00000017508) #21	Tmem150b (ENSRNOG00000028273) #22	Brsk1 (ENSRNOG00000017673) #23	Hspbp1 (ENSRNOG00000017795) #24	Ptprh (ENSRNOG00000058906)	Syt5 (ENSRNOG00000018217)	Dnaaf3 (ENSRNOG00000038600)	Tnni3 (ENSRNOG00000018250)	Tnnt1 (ENSRNOG00000028041)	Ppp1r12c (ENSRNOG00000053828)	Eps8l1 (ENSRNOG00000027942)	Rdh13 (ENSRNOG00000027919)	ENSRNOG00000062480	Gp6 (ENSRNOG00000047204)	Nlrp2 (ENSRNOG00000049759)	Ncr1 (ENSRNOG00000027855)	ENSRNOG00000066198
Upper Galilee mountains blind mole rat	MODERN SPECIES	1343	ENSNGAG00000014744	Ssc5d (ENSNGAG00000011192) #10	Nat14 (ENSNGAG00000011835) #11	Zfp628 (ENSNGAG00000012888) #12	Gm36210 (ENSNGAG00000014245) #13	Isoc2a (ENSNGAG00000016018) #14	Isoc2b (ENSNGAG00000003558) #15	Shisa7 (ENSNGAG00000008607)	ENSNGAG00000012718 #16	ENSNGAG00000016459 ##17	Tmem238 (ENSNGAG00000018226)	Tmem190 (ENSNGAG00000020448) #18	Il11 (ENSNGAG00000020282) #19	Cox6b2 (ENSNGAG00000000236) #20	Kmt5c (ENSNGAG00000002716) #21	ENSNGAG00000008679 #22	Brsk1 (ENSNGAG00000011472) #23	Hspbp1 (ENSNGAG00000017292) #24	ENSNGAG00000000503 #25	Tmem86b (ENSNGAG00000006434) #26	Ptprh (ENSNGAG00000018436)	Syt5 (ENSNGAG00000005623)	Dnaaf3 (ENSNGAG00000007936)	Tnni3 (ENSNGAG00000010137)	Tnnt1 (ENSNGAG00000005191)	Ppp1r12c (ENSNGAG00000015614)	ENSNGAG00000018836	ENSNGAG00000000920	Rdh13 (ENSNGAG00000001835)	ENSNGAG00000002403
Lesser Egyptian jerboa	MODERN SPECIES	249							ENSJJAG00000002909 #15	Shisa7 (ENSJJAG00000000151)	ENSJJAG00000019857 #16	Rpl28 (ENSJJAG00000019841) #17	Tmem190 (ENSJJAG00000019474) #18	Il11 (ENSJJAG00000018984) #19	ENSJJAG00000018518	Cox6b2 (ENSJJAG00000001150) #20	Kmt5c (ENSJJAG00000000222) #21	Tmem150b (ENSJJAG00000023317) #22	Brsk1 (ENSJJAG00000021973) #23	Hspbp1 (ENSJJAG00000020815) #24	ENSJJAG00000020637 #25	Tmem86b (ENSJJAG00000020487) #26	Ptprh (ENSJJAG00000015231)	Syt5 (ENSJJAG00000014748)	Dnaaf3 (ENSJJAG00000013059)	Tnni3 (ENSJJAG00000011375)	Tnnt1 (ENSJJAG00000014149)	Ppp1r12c (ENSJJAG00000010783)	ENSJJAG00000009977	ENSJJAG00000008371	Gp6 (ENSJJAG00000003429)	Ncr1 (ENSJJAG00000001068)
Kangaroo rat	MODERN SPECIES	508	Zfp865 (ENSDORG00000023200)	ENSDORG00000003689	ENSDORG00000025623	Sbk2 (ENSDORG00000000880) #9	Ssc5d (ENSDORG00000000879) #10	Nat14 (ENSDORG00000000878) #11	Zfp628 (ENSDORG00000000876) #12	ENSDORG00000012815 #15	Shisa7 (ENSDORG00000026157)	ENSDORG00000012810 #16	Rpl28 (ENSDORG00000012809) #17	Tmem190 (ENSDORG00000012807) #18	Il11 (ENSDORG00000012806) #19	Cox6b2 (ENSDORG00000012804) #20	Kmt5c (ENSDORG00000027615) #21	Tmem150b (ENSDORG00000012800) #22	Brsk1 (ENSDORG00000012799) #23	Hspbp1 (ENSDORG00000012796) #24	ENSDORG00000005202 #25	Tmem86b (ENSDORG00000005200) #26	Syt5 (ENSDORG00000011579)	Dnaaf3 (ENSDORG00000011578)	Tnni3 (ENSDORG00000011574)	Tnnt1 (ENSDORG00000011568)	Ppp1r12c (ENSDORG00000008039)	Eps8l1 (ENSDORG00000008033)	Rdh13 (ENSDORG00000008030)
Rodentia_A	ANCESTRAL SPECIES	28	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b
Sciuridae	ANCESTRAL SPECIES	39	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00390000008732.a.b ##17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b
Marmotini	ANCESTRAL SPECIES	48	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00390000008732.a.b ##17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000164511.C	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000161714.b
Marmotini_b	ANCESTRAL SPECIES	114	ENSGT00940000162592 #10	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b #17	ENSGT00390000008732.a.b ##17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00910000148545	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00940000162969	ENSGT00390000010577
Arctic ground squirrel	MODERN SPECIES	843																TMEM150B (ENSUPAG00010017185) #22	BRSK1 (ENSUPAG00010017191) #23	HSPBP1 (ENSUPAG00010017248) #24	PPP6R1 (ENSUPAG00010017251) #25	TMEM86B (ENSUPAG00010017288) #26	ENSUPAG00010017293	SYT5 (ENSUPAG00010017305)	DNAAF3 (ENSUPAG00010017309)	TNNI3 (ENSUPAG00010017324)	TNNT1 (ENSUPAG00010017329)	PPP1R12C (ENSUPAG00010017337)	EPS8L1 (ENSUPAG00010017482)	RDH13 (ENSUPAG00010017533)	ENSUPAG00010017540	ENSUPAG00010017581
Squirrel	MODERN SPECIES	484				SBK2 (ENSSTOG00000019463) #9	SSC5D (ENSSTOG00000006925) #10	NAT14 (ENSSTOG00000012301) #11	ZNF628 (ENSSTOG00000026126) #12	C19orf85 (ENSSTOG00000034379) #13	ISOC2 (ENSSTOG00000015685) #15	SHISA7 (ENSSTOG00000020184)	UBE2S (ENSSTOG00000023187) #16	RPL28 (ENSSTOG00000008006) #17	TMEM190 (ENSSTOG00000026466) #18	IL11 (ENSSTOG00000000690) #19	KMT5C (ENSSTOG00000000678) #21	TMEM150B (ENSSTOG00000005815) #22	BRSK1 (ENSSTOG00000005773) #23	HSPBP1 (ENSSTOG00000020717) #24	PPP6R1 (ENSSTOG00000015925) #25	TMEM86B (ENSSTOG00000031469) #26	ENSSTOG00000025588	SYT5 (ENSSTOG00000029144)	DNAAF3 (ENSSTOG00000005561)	TNNI3 (ENSSTOG00000005538)	TNNT1 (ENSSTOG00000025995)	PPP1R12C (ENSSTOG00000008693)	EPS8L1 (ENSSTOG00000023803)	RDH13 (ENSSTOG00000001121)	ENSSTOG00000027491	ENSSTOG00000019926	LENG8 (ENSSTOG00000028830)
Alpin marmot	MODERN SPECIES	104	ZNF581 (ENSMMMG00000001405)	ZNF784 (ENSMMMG00000001421)	ENSMMMG00000001452	ZNF524 (ENSMMMG00000001464)	SBK2 (ENSMMMG00000001514) #9	ENSMMMG00000001536 #10	NAT14 (ENSMMMG00000001549) #11	C19orf85 (ENSMMMG00000001567) #13	ISOC2 (ENSMMMG00000001585) #15	UBE2S (ENSMMMG00000001622) #16	RPL28 (ENSMMMG00000001659) #17	IL11 (ENSMMMG00000001672) #19	ENSMMMG00000001685	COX6B2 (ENSMMMG00000001696) #20	KMT5C (ENSMMMG00000001728) #21	TMEM150B (ENSMMMG00000001781) #22	ENSMMMG00000001801	ENSMMMG00000001815 #23	HSPBP1 (ENSMMMG00000001839) #24	PPP6R1 (ENSMMMG00000001858) #25	TMEM86B (ENSMMMG00000001911) #26	ENSMMMG00000001933	DNAAF3 (ENSMMMG00000001951)	TNNI3 (ENSMMMG00000001999)	TNNT1 (ENSMMMG00000002017)	PPP1R12C (ENSMMMG00000002082)	EPS8L1 (ENSMMMG00000002374)	RDH13 (ENSMMMG00000002466)	ENSMMMG00000002480	ENSMMMG00000002483	ENSMMMG00000002488
Eurasian red squirrel	MODERN SPECIES	8	SSC5D (ENSSVLG00005023992) #10	NAT14 (ENSSVLG00005023966) #11	ZNF628 (ENSSVLG00005023955) #12	C19orf85 (ENSSVLG00005023926) #13	ISOC2 (ENSSVLG00005023878) #15	SHISA7 (ENSSVLG00005023839)	UBE2S (ENSSVLG00005023806) #16	TMEM238 (ENSSVLG00005023792)	RPL28 (ENSSVLG00005023771) #17	TMEM190 (ENSSVLG00005023734) #18	IL11 (ENSSVLG00005023677) #19	ENSSVLG00005023651	ENSSVLG00005023607	COX6B2 (ENSSVLG00005023567) #20	KMT5C (ENSSVLG00005023510) #21	TMEM150B (ENSSVLG00005023454) #22	BRSK1 (ENSSVLG00005023255) #23	HSPBP1 (ENSSVLG00005023210) #24	PPP6R1 (ENSSVLG00005023166) #25	TMEM86B (ENSSVLG00005023109) #26	ENSSVLG00005023056	PTPRH (ENSSVLG00005022817)	SYT5 (ENSSVLG00005022694)	DNAAF3 (ENSSVLG00005022610)	TNNI3 (ENSSVLG00005022449)	TNNT1 (ENSSVLG00005022059)	PPP1R12C (ENSSVLG00005021865)	EPS8L1 (ENSSVLG00005021551)	ENSSVLG00005021428	ENSSVLG00005021353	ENSSVLG00005021319
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00950000182932.A.b.b #11	ENSGT00910000144307 #12	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.a.b #17	ENSGT00940000162720.b.b	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT00390000008006	ENSGT00950000183060.a.b.b.b
Guinea pig	MODERN SPECIES	70				NAT14 (ENSCPOG00000004948) #11	ZNF628 (ENSCPOG00000036775) #12	C19orf85 (ENSCPOG00000036337) #13	ISOC2 (ENSCPOG00000014834) #15	SHISA7 (ENSCPOG00000036738)	UBE2S (ENSCPOG00000012837) #16	ENSCPOG00000012833 #17	TMEM238 (ENSCPOG00000019669)	TMEM190 (ENSCPOG00000015468) #18	IL11 (ENSCPOG00000009123) #19	COX6B2 (ENSCPOG00000009105) #20	KMT5C (ENSCPOG00000009102) #21	TMEM150B (ENSCPOG00000039123) #22	BRSK1 (ENSCPOG00000009088) #23	HSPBP1 (ENSCPOG00000030758) #24	PPP6R1 (ENSCPOG00000021924) #25	TMEM86B (ENSCPOG00000009709) #26	ENSCPOG00000026559	SYT5 (ENSCPOG00000009084)	DNAAF3 (ENSCPOG00000009082)	TNNI3 (ENSCPOG00000020449)	TNNT1 (ENSCPOG00000022114)	PPP1R12C (ENSCPOG00000027133)	ENSCPOG00000006835	RDH13 (ENSCPOG00000012153)	NCR1 (ENSCPOG00000001319)	ENSCPOG00000007412	ENSCPOG00000030847
Hystricomorpha_b	ANCESTRAL SPECIES	88	ENSGT00940000162592 #10	ENSGT01000000216607	ENSGT00910000144307 #12	ENSGT00950000182932.A.b.b #11	ENSGT00850000133583 #13	ENSGT00390000006753.A #15	ENSGT00940000162254	ENSGT00940000157149 #16	ENSGT00390000008732.a.a.b.a.b #17	ENSGT00390000008732.a.a.b.b #17	ENSGT00390000006710 #18	ENSGT00390000007165 #19	ENSGT00940000163150	ENSGT00940000162621 #20	ENSGT00940000161700 #21	ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23	ENSGT00940000153909.a #24	ENSGT00390000009899.a.c #25	ENSGT00390000007101.d.a #26	ENSGT00940000162227	ENSGT00940000161816	ENSGT00390000002069	ENSGT01030000234588.b.b.b.b.b	ENSGT00940000160609	ENSGT00940000161425	ENSGT00940000158125	ENSGT00940000159641	ENSGT01100000263478.b.a.b.a	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.c	ENSGT01100000263478.b.a.b.b.b.a.a.b.c.b.d.a.a
Long-tailed chinchilla	MODERN SPECIES	274	ENSCLAG00000000471	ENSCLAG00000000506	SBK2 (ENSCLAG00000000598) #9	SSC5D (ENSCLAG00000000276) #10	ZNF628 (ENSCLAG00000000533) #12	NAT14 (ENSCLAG00000000540) #11	ISOC2 (ENSCLAG00000000572) #15	ENSCLAG00000000623	UBE2S (ENSCLAG00000000649) #16	RPL28 (ENSCLAG00000000684) #17	TMEM190 (ENSCLAG00000000703) #18	IL11 (ENSCLAG00000000724) #19	ENSCLAG00000000763	COX6B2 (ENSCLAG00000000892) #20	KMT5C (ENSCLAG00000000904) #21	TMEM150B (ENSCLAG00000000936) #22	BRSK1 (ENSCLAG00000000981) #23	HSPBP1 (ENSCLAG00000000510) #24	PPP6R1 (ENSCLAG00000000725) #25	TMEM86B (ENSCLAG00000000569) #26	ENSCLAG00000000594	SYT5 (ENSCLAG00000000778)	DNAAF3 (ENSCLAG00000000382)	TNNI3 (ENSCLAG00000000516)	TNNT1 (ENSCLAG00000000706)	PPP1R12C (ENSCLAG00000000907)	EPS8L1 (ENSCLAG00000000411)	RDH13 (ENSCLAG00000001660)	ENSCLAG00000001076	ENSCLAG00000001196	ENSCLAG00000001529
Degu	MODERN SPECIES	361	ZNF579 (ENSODEG00000013209) #7	ENSODEG00000010550	SBK2 (ENSODEG00000010236) #9	SSC5D (ENSODEG00000009970) #10	ENSODEG00000010952	ZNF628 (ENSODEG00000009941) #12	SHISA7 (ENSODEG00000010663)	C19orf85 (ENSODEG00000011049) #13	ISOC2 (ENSODEG00000010105) #15	ENSODEG00000011615 #16	ENSODEG00000010391 #17	TMEM190 (ENSODEG00000009911) #18	IL11 (ENSODEG00000010163) #19	COX6B2 (ENSODEG00000010701) #20	KMT5C (ENSODEG00000010521) #21	TMEM150B (ENSODEG00000010863) #22	BRSK1 (ENSODEG00000014498) #23	HSPBP1 (ENSODEG00000010633) #24	ENSODEG00000011540 #25	TMEM86B (ENSODEG00000011909) #26	ENSODEG00000012643	SYT5 (ENSODEG00000011988)	DNAAF3 (ENSODEG00000010996)	TNNI3 (ENSODEG00000011412)	TNNT1 (ENSODEG00000010639)	PPP1R12C (ENSODEG00000010142)	EPS8L1 (ENSODEG00000011275)	RDH13 (ENSODEG00000011963)	ENSODEG00000020005	ENSODEG00000012519
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000049682	ZNF524 (ENSHGLG00000042863)	FIZ1 (ENSHGLG00000049423)	ENSHGLG00000050249	ENSHGLG00000015309	SBK2 (ENSHGLG00000035076) #9	ENSHGLG00000035277	NAT14 (ENSHGLG00000033788) #11	ISOC2 (ENSHGLG00000036834) #15	ENSHGLG00000034906 #16	RPL28 (ENSHGLG00000040310) #17	TMEM238 (ENSHGLG00000042230)	IL11 (ENSHGLG00000039159) #19	COX6B2 (ENSHGLG00000043169) #20	KMT5C (ENSHGLG00000046126) #21	ENSHGLG00000014752 #22	ENSHGLG00000048831	ENSHGLG00000004906 #23	ENSHGLG00000040140 #23	ENSHGLG00000049528 #24	ENSHGLG00000043133 #25	ENSHGLG00000044106	ENSHGLG00000015452	ENSHGLG00000016036	SYT5 (ENSHGLG00000015144)	ENSHGLG00000016420	TNNI3 (ENSHGLG00000035434)	TNNT1 (ENSHGLG00000009790)	ENSHGLG00000047300	ENSHGLG00000045855	ENSHGLG00000009349
Lagomorpha	ANCESTRAL SPECIES	581																ENSGT01030000234578.A.b.b #22	ENSGT00940000161254 #23
Rabbit	MODERN SPECIES	1279																TMEM150B (ENSOCUG00000012773) #22	BRSK1 (ENSOCUG00000012750) #23
Pika	MODERN SPECIES	2611																TMEM150B (ENSOPRG00000017244) #22