Bilateria	ANCESTRAL SPECIES																	ENSGT00940000153239.B #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000153239.B #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153239.B #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00940000153239.B #22
Euteleostomi	ANCESTRAL SPECIES	192	ENSGT00940000155618	ENSGT00940000155497	ENSGT00390000001347	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22
Sarcopterygii	ANCESTRAL SPECIES	213	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00940000161826.C	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22
Tetrapoda	ANCESTRAL SPECIES	76	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Theria	ANCESTRAL SPECIES	2	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00550000074840.z ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Primates	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	27	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00940000155618.ab	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203.a #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00390000018518.w.a #16	ENSGT00940000154208.d	ENSGT00390000018518.x ##16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724.a #32	ENSGT00910000147647	ENSGT00420000030724.b #33	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Mas night monkey	MODERN SPECIES	1154				L3MBTL2 (ENSANAG00000029131) #10	ENSANAG00000022120 #11	ENSANAG00000025645 #12	ENSANAG00000032854 #13	ZC3H7B (ENSANAG00000026268) #14	TEF (ENSANAG00000034941) #15	ENSANAG00000028988 #16	ACO2 (ENSANAG00000029281) #17	POLR3H (ENSANAG00000025122) #18	CSDC2 (ENSANAG00000020803) #19	PMM1 (ENSANAG00000027683) #20	DESI1 (ENSANAG00000033964) #21	XRCC6 (ENSANAG00000018684) #22	SNU13 (ENSANAG00000023772) #23	MEI1 (ENSANAG00000030252) #24	CCDC134 (ENSANAG00000030858) #25	ENSANAG00000031745 #26	SREBF2 (ENSANAG00000027763) #27	SHISA8 (ENSANAG00000030774) #28	TNFRSF13C (ENSANAG00000022162) #29	ENSANAG00000031331 #30	CENPM (ENSANAG00000032170) #31	ENSANAG00000020496 #32	ENSANAG00000031290 #33	ENSANAG00000019445 #34	WBP2NL (ENSANAG00000029029) #35	NAGA (ENSANAG00000027293) #36
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000155618.ab	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203.a #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518.w.a #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.a.a.b ##22	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724.a #32	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES		MCHR1 (ENSCJAG00000002884)	MRTFA (ENSCJAG00000002850)	SGSM3 (ENSCJAG00000002827)	ADSL (ENSCJAG00000002764)	TNRC6B (ENSCJAG00000002732)	FAM83F (ENSCJAG00000002721)	GRAP2 (ENSCJAG00000056000)	ENTHD1 (ENSCJAG00000002696)	CACNA1I (ENSCJAG00000044108)	RPS19BP1 (ENSCJAG00000047117)	ATF4 (ENSCJAG00000002594)	MIEF1 (ENSCJAG00000002588)	CSDC2 (ENSCJAG00000085773) #19	PMM1 (ENSCJAG00000002559) #20	DESI1 (ENSCJAG00000018941) #21	ENSCJAG00000045512 #22	SNU13 (ENSCJAG00000070172) #23	MEI1 (ENSCJAG00000002425) #24	CCDC134 (ENSCJAG00000002415) #25	SREBF2 (ENSCJAG00000002378) #27	SHISA8 (ENSCJAG00000014945) #28	TNFRSF13C (ENSCJAG00000002372) #29	CENPM (ENSCJAG00000002359) #31	SMIM45 (ENSCJAG00000044184) #32	SEPTIN3 (ENSCJAG00000043636) #34	WBP2NL (ENSCJAG00000002344) #35	NAGA (ENSCJAG00000002338) #36	PHETA2 (ENSCJAG00000002334)	SMDT1 (ENSCJAG00000002333)	NDUFA6 (ENSCJAG00000074627)	ENSCJAG00000033546
Marmoset	MODERN SPECIES	17	ENSCJAG00000048573	NPEPPS (ENSCJAG00000007985)	KPNB1 (ENSCJAG00000007834)	TBKBP1 (ENSCJAG00000045710)	TBX21 (ENSCJAG00000007796)	OSBPL7 (ENSCJAG00000007585)	MRPL10 (ENSCJAG00000007787)	LRRC46 (ENSCJAG00000007776)	SCRN2 (ENSCJAG00000047705)	SP6 (ENSCJAG00000043946)	SP2 (ENSCJAG00000007713)	PNPO (ENSCJAG00000007693)	PRR15L (ENSCJAG00000044487)	CDK5RAP3 (ENSCJAG00000007669)	COPZ2 (ENSCJAG00000007567)	ENSCJAG00000058197 #22	NFE2L1 (ENSCJAG00000007542)	CBX1 (ENSCJAG00000042052)	SNX11 (ENSCJAG00000039549)	SKAP1 (ENSCJAG00000007504)	ENSCJAG00000038853	HOXB1 (ENSCJAG00000007496)	HOXB2 (ENSCJAG00000007494)	HOXB3 (ENSCJAG00000007487)	HOXB4 (ENSCJAG00000007480)	HOXB5 (ENSCJAG00000007472)	HOXB6 (ENSCJAG00000007467)	HOXB7 (ENSCJAG00000007457)	HOXB8 (ENSCJAG00000045730)	HOXB9 (ENSCJAG00000007442)	HOXB13 (ENSCJAG00000007437)
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.b #22
Capuchin	MODERN SPECIES	49	CNDP2 (ENSCCAG00000031433)	DIPK1C (ENSCCAG00000022135)	C18orf63 (ENSCCAG00000023366)	CYB5A (ENSCCAG00000029960)	ENSCCAG00000021881	FBXO15 (ENSCCAG00000025771)	NETO1 (ENSCCAG00000034235)	CBLN2 (ENSCCAG00000037222)	SOCS6 (ENSCCAG00000011029)	RTTN (ENSCCAG00000033623)	ENSCCAG00000025716	CD226 (ENSCCAG00000023410)	DOK6 (ENSCCAG00000035565)	CCDC102B (ENSCCAG00000022404)	TMX3 (ENSCCAG00000034310)	ENSCCAG00000035711 #22
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.g #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Gorilla	MODERN SPECIES	13	DNAJB7 (ENSGGOG00000003936)	ENSGGOG00000003524	ENSGGOG00000025031	EP300 (ENSGGOG00000008201)	L3MBTL2 (ENSGGOG00000013451) #10	CHADL (ENSGGOG00000013462) #11	RANGAP1 (ENSGGOG00000013473) #13	ZC3H7B (ENSGGOG00000014138) #14	TEF (ENSGGOG00000043695) #15	PHF5A (ENSGGOG00000001104) #16	ACO2 (ENSGGOG00000001107) #17	POLR3H (ENSGGOG00000038191) #18	CSDC2 (ENSGGOG00000037916) #19	PMM1 (ENSGGOG00000025969) #20	DESI1 (ENSGGOG00000015877) #21	XRCC6 (ENSGGOG00000015885) #22	SNU13 (ENSGGOG00000015898) #23	MEI1 (ENSGGOG00000004400) #24	CCDC134 (ENSGGOG00000012055) #25	SREBF2 (ENSGGOG00000012065) #27	ENSGGOG00000036616 #28	TNFRSF13C (ENSGGOG00000012089) #29	SMIM45 (ENSGGOG00000037729) #32	ENSGGOG00000008961 #34	WBP2NL (ENSGGOG00000034969) #35	NAGA (ENSGGOG00000007889) #36	PHETA2 (ENSGGOG00000037366)	SMDT1 (ENSGGOG00000007903)	NDUFA6 (ENSGGOG00000007905)	ENSGGOG00000005816	ENSGGOG00000000459
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.g #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Pan	ANCESTRAL SPECIES	23	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00910000148068	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.g #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00390000000673.b.a.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	805															ENSPTRG00000043420 #21	XRCC6 (ENSPTRG00000045824) #22	SNU13 (ENSPTRG00000052851) #23	ENSPTRG00000046952
Chimpanzee	MODERN SPECIES	13	RBX1 (ENSPTRG00000014417)	ENSPTRG00000041697	EP300 (ENSPTRG00000014418)	L3MBTL2 (ENSPTRG00000014419) #10	CHADL (ENSPTRG00000014420) #11	RANGAP1 (ENSPTRG00000023600) #13	ZC3H7B (ENSPTRG00000014424) #14	TEF (ENSPTRG00000014425) #15	ENSPTRG00000043552	PHF5A (ENSPTRG00000014427) #16	ACO2 (ENSPTRG00000014428) #17	POLR3H (ENSPTRG00000051865) #18	CSDC2 (ENSPTRG00000044110) #19	PMM1 (ENSPTRG00000014432) #20	DESI1 (ENSPTRG00000014433) #21	XRCC6 (ENSPTRG00000022548) #22	SNU13 (ENSPTRG00000014435) #23	ENSPTRG00000041505	MEI1 (ENSPTRG00000014436) #24	CCDC134 (ENSPTRG00000014438) #25	SREBF2 (ENSPTRG00000014439) #27	SHISA8 (ENSPTRG00000039404) #28	TNFRSF13C (ENSPTRG00000014441) #29	CENPM (ENSPTRG00000014442) #31	SEPTIN3 (ENSPTRG00000014444) #34	WBP2NL (ENSPTRG00000022684) #35	NAGA (ENSPTRG00000014446) #36	PHETA2 (ENSPTRG00000049204)	SMDT1 (ENSPTRG00000014448)	NDUFA6 (ENSPTRG00000014449)	ENSPTRG00000048207
Bonobo	MODERN SPECIES	13	RBX1 (ENSPPAG00000031663)	ENSPPAG00000035289	EP300 (ENSPPAG00000032679)	L3MBTL2 (ENSPPAG00000040643) #10	ENSPPAG00000040223 #11	RANGAP1 (ENSPPAG00000037749) #13	ZC3H7B (ENSPPAG00000034228) #14	TEF (ENSPPAG00000035585) #15	ENSPPAG00000032847	PHF5A (ENSPPAG00000008422) #16	ACO2 (ENSPPAG00000019653) #17	POLR3H (ENSPPAG00000031000) #18	CSDC2 (ENSPPAG00000032112) #19	PMM1 (ENSPPAG00000034355) #20	DESI1 (ENSPPAG00000035138) #21	XRCC6 (ENSPPAG00000037167) #22	SNU13 (ENSPPAG00000026299) #23	ENSPPAG00000028172	MEI1 (ENSPPAG00000029081) #24	CCDC134 (ENSPPAG00000031113) #25	SREBF2 (ENSPPAG00000032656) #27	ENSPPAG00000036533 #29	CENPM (ENSPPAG00000037196) #31	ENSPPAG00000013116 #34	WBP2NL (ENSPPAG00000038703) #35	ENSPPAG00000040953	NAGA (ENSPPAG00000034278) #36	PHETA2 (ENSPPAG00000000902)	SMDT1 (ENSPPAG00000036299)	NDUFA6 (ENSPPAG00000037220)	ENSPPAG00000037463
Human	MODERN SPECIES	14	DNAJB7 (ENSG00000172404)	RBX1 (ENSG00000100387)	EP300 (ENSG00000100393)	L3MBTL2 (ENSG00000100395) #10	CHADL (ENSG00000100399) #11	RANGAP1 (ENSG00000100401) #13	ZC3H7B (ENSG00000100403) #14	TEF (ENSG00000167074) #15	TOB2 (ENSG00000183864)	ACO2 (ENSG00000100412) #17	PHF5A (ENSG00000100410) #16	POLR3H (ENSG00000100413) #18	CSDC2 (ENSG00000172346) #19	PMM1 (ENSG00000100417) #20	DESI1 (ENSG00000100418) #21	XRCC6 (ENSG00000196419) #22	SNU13 (ENSG00000100138) #23	MEI1 (ENSG00000167077) #24	CCDC134 (ENSG00000100147) #25	SREBF2 (ENSG00000198911) #27	SHISA8 (ENSG00000234965) #28	TNFRSF13C (ENSG00000159958) #29	CENPM (ENSG00000100162) #31	SMIM45 (ENSG00000205704) #32	SEPTIN3 (ENSG00000100167) #34	WBP2NL (ENSG00000183066) #35	NAGA (ENSG00000198951) #36	PHETA2 (ENSG00000177096)	SMDT1 (ENSG00000183172)	NDUFA6 (ENSG00000184983)	CYP2D6 (ENSG00000100197)
Orangutan	MODERN SPECIES	13	XPNPEP3 (ENSPPYG00000011859)	RBX1 (ENSPPYG00000011861)	EP300 (ENSPPYG00000011862)	L3MBTL2 (ENSPPYG00000011863) #10	CHADL (ENSPPYG00000011864) #11	ENSPPYG00000040861	RANGAP1 (ENSPPYG00000011865) #13	ZC3H7B (ENSPPYG00000011866) #14	TEF (ENSPPYG00000011867) #15	TOB2 (ENSPPYG00000011869)	ENSPPYG00000011870 #16	ACO2 (ENSPPYG00000011871) #17	ENSPPYG00000011872 #18	CSDC2 (ENSPPYG00000036694) #19	ENSPPYG00000011875 #20	XRCC6 (ENSPPYG00000011876) #22	ENSPPYG00000033456 #23	ENSPPYG00000033524	ENSPPYG00000031869	MEI1 (ENSPPYG00000011878) #24	CCDC134 (ENSPPYG00000011879) #25	SREBF2 (ENSPPYG00000011880) #27	SHISA8 (ENSPPYG00000033304) #28	TNFRSF13C (ENSPPYG00000011883) #29	CENPM (ENSPPYG00000011884) #31	SMIM45 (ENSPPYG00000037524) #32	SEPTIN3 (ENSPPYG00000011886) #34	ENSPPYG00000011887	NAGA (ENSPPYG00000011888) #36	PHETA2 (ENSPPYG00000011889)	SMDT1 (ENSPPYG00000011890)
Gibbon	MODERN SPECIES	22	DNAJB7 (ENSNLEG00000015434)	XPNPEP3 (ENSNLEG00000029969)	RBX1 (ENSNLEG00000028919)	EP300 (ENSNLEG00000015440)	L3MBTL2 (ENSNLEG00000015454) #10	CHADL (ENSNLEG00000015463) #11	RANGAP1 (ENSNLEG00000015464) #13	ZC3H7B (ENSNLEG00000015470) #14	TEF (ENSNLEG00000015473) #15	ENSNLEG00000015481 #16	ACO2 (ENSNLEG00000015482) #17	POLR3H (ENSNLEG00000015536) #18	ENSNLEG00000015551 #19	PMM1 (ENSNLEG00000015555) #20	DESI1 (ENSNLEG00000015592) #21	XRCC6 (ENSNLEG00000015610) #22	SNU13 (ENSNLEG00000027284) #23	ENSNLEG00000030585	MEI1 (ENSNLEG00000015634) #24	CCDC134 (ENSNLEG00000015642) #25	SREBF2 (ENSNLEG00000015650) #27	ENSNLEG00000027977 #28	TNFRSF13C (ENSNLEG00000015666) #29	CENPM (ENSNLEG00000015669) #31	SMIM45 (ENSNLEG00000029114) #32	ENSNLEG00000015691 #34	WBP2NL (ENSNLEG00000015747) #35	NAGA (ENSNLEG00000015762) #36	PHETA2 (ENSNLEG00000015809)	SMDT1 (ENSNLEG00000015811)	NDUFA6 (ENSNLEG00000015817)
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000154846.b.k.a.a	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00940000155618.cb.a.a	ENSGT00940000155618.cb.b	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.`b.a
Macaca	ANCESTRAL SPECIES	20	ENSGT00940000153657.A	ENSGT00940000155618.cb.a.a	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.`b.a
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00940000155618.cb.a.a	ENSGT00940000154846.b.k.a.a	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.`b.a
Crab-eating macaque	MODERN SPECIES	1	EP300 (ENSMFAG00000039593)	L3MBTL2 (ENSMFAG00000037650) #10	RANGAP1 (ENSMFAG00000040386) #13	ZC3H7B (ENSMFAG00000037965) #14	TEF (ENSMFAG00000033476) #15	TOB2 (ENSMFAG00000019801)	PHF5A (ENSMFAG00000003129) #16	ENSMFAG00000047419	POLR3H (ENSMFAG00000001153) #18	ACO2 (ENSMFAG00000043571) #17	CSDC2 (ENSMFAG00000060068) #19	PMM1 (ENSMFAG00000034090) #20	ENSMFAG00000007408	ENSMFAG00000034617	ENSMFAG00000056431	XRCC6 (ENSMFAG00000003352) #22	SNU13 (ENSMFAG00000031096) #23	MEI1 (ENSMFAG00000035767) #24	CCDC134 (ENSMFAG00000031727) #25	SREBF2 (ENSMFAG00000043421) #27	SHISA8 (ENSMFAG00000050220) #28	TNFRSF13C (ENSMFAG00000048896) #29	CENPM (ENSMFAG00000042414) #31	SMIM45 (ENSMFAG00000064531) #32	ENSMFAG00000039306 #34	WBP2NL (ENSMFAG00000034650) #35	NAGA (ENSMFAG00000002492) #36	PHETA2 (ENSMFAG00000057151)	SMDT1 (ENSMFAG00000044573)	NDUFA6 (ENSMFAG00000039783)	ENSMFAG00000053847
Rhesus	MODERN SPECIES	1	ENSMMUG00000058288	ENSMMUG00000040029	EP300 (ENSMMUG00000000893)	L3MBTL2 (ENSMMUG00000014164) #10	CHADL (ENSMMUG00000014165) #11	RANGAP1 (ENSMMUG00000014166) #13	ZC3H7B (ENSMMUG00000005219) #14	TEF (ENSMMUG00000005221) #15	TOB2 (ENSMMUG00000002554)	PHF5A (ENSMMUG00000065330) #16	POLR3H (ENSMMUG00000001459) #18	ACO2 (ENSMMUG00000001454) #17	CSDC2 (ENSMMUG00000062477) #19	PMM1 (ENSMMUG00000001853) #20	DESI1 (ENSMMUG00000050219) #21	XRCC6 (ENSMMUG00000001856) #22	SNU13 (ENSMMUG00000042546) #23	ENSMMUG00000007290	MEI1 (ENSMMUG00000031012) #24	CCDC134 (ENSMMUG00000011531) #25	SREBF2 (ENSMMUG00000003357) #27	SHISA8 (ENSMMUG00000015101) #28	TNFRSF13C (ENSMMUG00000052011) #29	CENPM (ENSMMUG00000003360) #31	ENSMMUG00000064392 #32	ENSMMUG00000064409	SEPTIN3 (ENSMMUG00000015139) #34	WBP2NL (ENSMMUG00000031011) #35	NAGA (ENSMMUG00000000005) #36	PHETA2 (ENSMMUG00000013062)	SMDT1 (ENSMMUG00000013061)
Pig-tailed macaque	MODERN SPECIES	329	EP300 (ENSMNEG00000043056)	L3MBTL2 (ENSMNEG00000044141) #10	CHADL (ENSMNEG00000036193) #11	RANGAP1 (ENSMNEG00000036291) #13	ZC3H7B (ENSMNEG00000036730) #14	TEF (ENSMNEG00000020616) #15	ENSMNEG00000006468	ENSMNEG00000010834	TOB2 (ENSMNEG00000020529)	PHF5A (ENSMNEG00000045104) #16	ACO2 (ENSMNEG00000044522) #17	POLR3H (ENSMNEG00000022264) #18	CSDC2 (ENSMNEG00000027703) #19	PMM1 (ENSMNEG00000021815) #20	DESI1 (ENSMNEG00000030194) #21	XRCC6 (ENSMNEG00000035076) #22	ENSMNEG00000033195 ##23	ENSMNEG00000045462	MEI1 (ENSMNEG00000032013) #24	CCDC134 (ENSMNEG00000040902) #25	SREBF2 (ENSMNEG00000041251) #27	SHISA8 (ENSMNEG00000032491) #28	TNFRSF13C (ENSMNEG00000043183) #29	CENPM (ENSMNEG00000045162) #31	SMIM45 (ENSMNEG00000014211) #32	ENSMNEG00000038786 #34	WBP2NL (ENSMNEG00000032711) #35	NAGA (ENSMNEG00000034440) #36	SMDT1 (ENSMNEG00000038492)	ENSMNEG00000033937	CYP2D6 (ENSMNEG00000037279)
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00940000155618.cb.b	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00510000046986.n.b	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.`b.a
Olive baboon	MODERN SPECIES	7	RBX1 (ENSPANG00000046052)	ENSPANG00000038187	EP300 (ENSPANG00000015108)	L3MBTL2 (ENSPANG00000001305) #10	CHADL (ENSPANG00000001306) #11	RANGAP1 (ENSPANG00000019687) #13	ZC3H7B (ENSPANG00000019690) #14	TEF (ENSPANG00000037689) #15	ENSPANG00000047887	TOB2 (ENSPANG00000009655)	PHF5A (ENSPANG00000011337) #16	ENSPANG00000015758 #18	ACO2 (ENSPANG00000024107) #17	PMM1 (ENSPANG00000048796) #20	DESI1 (ENSPANG00000045717) #21	XRCC6 (ENSPANG00000001252) #22	SNU13 (ENSPANG00000038561) #23	ENSPANG00000045378	MEI1 (ENSPANG00000005138) #24	CCDC134 (ENSPANG00000013694) #25	SREBF2 (ENSPANG00000008691) #27	ENSPANG00000000730 #28	TNFRSF13C (ENSPANG00000022555) #29	CENPM (ENSPANG00000013693) #31	SMIM45 (ENSPANG00000031812) #32	ENSPANG00000047532	TCF20 (ENSPANG00000023578)	CYP2D8P1 (ENSPANG00000032096)	CYP2D6 (ENSPANG00000024403)	NDUFA6 (ENSPANG00000006974)	SMDT1 (ENSPANG00000034206)
Cercopithecinae_d	ANCESTRAL SPECIES	17	ENSGT00940000155618.cb.b	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00510000046986.n.b	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00390000017489	ENSGT00390000018898.`b.a	ENSGT00940000153331.fb	ENSGT00940000153331.gb.b
Drill	MODERN SPECIES	751	ENSMLEG00000044153	EP300 (ENSMLEG00000039670)	L3MBTL2 (ENSMLEG00000021840) #10	CHADL (ENSMLEG00000037296) #11	RANGAP1 (ENSMLEG00000030778) #13	ZC3H7B (ENSMLEG00000037209) #14	TEF (ENSMLEG00000033784) #15	ENSMLEG00000004379	TOB2 (ENSMLEG00000011426)	PHF5A (ENSMLEG00000037662) #16	ACO2 (ENSMLEG00000031603) #17	POLR3H (ENSMLEG00000024568) #18	CSDC2 (ENSMLEG00000034612) #19	PMM1 (ENSMLEG00000030064) #20	DESI1 (ENSMLEG00000043217) #21	XRCC6 (ENSMLEG00000019869) #22	SNU13 (ENSMLEG00000042136) #23	MEI1 (ENSMLEG00000033254) #24	CCDC134 (ENSMLEG00000029232) #25	SREBF2 (ENSMLEG00000044114) #27	ENSMLEG00000030816 #29	CENPM (ENSMLEG00000001034) #31	SMIM45 (ENSMLEG00000039503) #32	ENSMLEG00000037222 #34	ENSMLEG00000035457	NAGA (ENSMLEG00000032172) #36	SMDT1 (ENSMLEG00000042105)	ENSMLEG00000042993	CYP2D6 (ENSMLEG00000040181)	ENSMLEG00000006236	TCF20 (ENSMLEG00000008199)
Sooty mangabey	MODERN SPECIES	103	ENSCATG00000044606	EP300 (ENSCATG00000043641)	L3MBTL2 (ENSCATG00000037314) #10	CHADL (ENSCATG00000040617) #11	RANGAP1 (ENSCATG00000001985) #13	ZC3H7B (ENSCATG00000037774) #14	TEF (ENSCATG00000034168) #15	ENSCATG00000022368	TOB2 (ENSCATG00000021391)	PHF5A (ENSCATG00000012251) #16	ACO2 (ENSCATG00000030437) #17	POLR3H (ENSCATG00000018316) #18	CSDC2 (ENSCATG00000035356) #19	PMM1 (ENSCATG00000041928) #20	DESI1 (ENSCATG00000000926) #21	XRCC6 (ENSCATG00000042366) #22	SNU13 (ENSCATG00000038628) #23	MEI1 (ENSCATG00000039577) #24	CCDC134 (ENSCATG00000040974) #25	SREBF2 (ENSCATG00000036837) #27	SHISA8 (ENSCATG00000045183) #28	TNFRSF13C (ENSCATG00000021445) #29	CENPM (ENSCATG00000029981) #31	SMIM45 (ENSCATG00000021505) #32	ENSCATG00000045173 #34	WBP2NL (ENSCATG00000041021) #35	NAGA (ENSCATG00000029348) #36	SMDT1 (ENSCATG00000013128)	ENSCATG00000033405	CYP2D6 (ENSCATG00000008129)	ENSCATG00000036769
Vervet Monkey	MODERN SPECIES	10	RBX1 (ENSCSAG00000005849)	EP300 (ENSCSAG00000005846)	ENSCSAG00000019282	L3MBTL2 (ENSCSAG00000005839) #10	CHADL (ENSCSAG00000005836) #11	RANGAP1 (ENSCSAG00000005830) #13	ZC3H7B (ENSCSAG00000005824) #14	TEF (ENSCSAG00000005816) #15	TOB2 (ENSCSAG00000019283)	PHF5A (ENSCSAG00000005811) #16	ACO2 (ENSCSAG00000005807) #17	POLR3H (ENSCSAG00000005798) #18	CSDC2 (ENSCSAG00000005794) #19	PMM1 (ENSCSAG00000005792) #20	DESI1 (ENSCSAG00000005787) #21	XRCC6 (ENSCSAG00000005784) #22	SNU13 (ENSCSAG00000005776) #23	ENSCSAG00000005774	MEI1 (ENSCSAG00000005763) #24	CCDC134 (ENSCSAG00000005737) #25	SREBF2 (ENSCSAG00000005734) #27	ENSCSAG00000005730 #28	TNFRSF13C (ENSCSAG00000005729) #29	CENPM (ENSCSAG00000005725) #31	ENSCSAG00000005722 #34	ENSCSAG00000005718	WBP2NL (ENSCSAG00000005713) #35	NAGA (ENSCSAG00000005710) #36	PHETA2 (ENSCSAG00000019284)	SMDT1 (ENSCSAG00000005706)	NDUFA6 (ENSCSAG00000005702)
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.b.e #22
Golden snub-nosed monkey	MODERN SPECIES	1899															EDDM3B (ENSRROG00000037495)	ENSRROG00000037576 #22
Black snub-nosed monkey	MODERN SPECIES	3106																ENSRBIG00000029458 #22
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000154846.b.k.a.c	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00390000018518 #16	ENSGT00940000154892.f #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.b.f #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.fb
Black snub-nosed monkey	MODERN SPECIES	311	XPNPEP3 (ENSRBIG00000043347)	RBX1 (ENSRBIG00000043855)	EP300 (ENSRBIG00000040546)	ENSRBIG00000032400	L3MBTL2 (ENSRBIG00000029454) #10	CHADL (ENSRBIG00000044046) #11	RANGAP1 (ENSRBIG00000040255) #13	ZC3H7B (ENSRBIG00000013333) #14	TEF (ENSRBIG00000037619) #15	ENSRBIG00000030586 #16	ACO2 (ENSRBIG00000035174) #17	POLR3H (ENSRBIG00000040089) #18	CSDC2 (ENSRBIG00000039404) #19	PMM1 (ENSRBIG00000033292) #20	DESI1 (ENSRBIG00000035678) #21	ENSRBIG00000039794 #22
Golden snub-nosed monkey	MODERN SPECIES	575	ENSRROG00000033331	XPNPEP3 (ENSRROG00000044414)	RBX1 (ENSRROG00000029154)	EP300 (ENSRROG00000037756)	L3MBTL2 (ENSRROG00000036118) #10	CHADL (ENSRROG00000039682) #11	RANGAP1 (ENSRROG00000045722) #13	ZC3H7B (ENSRROG00000033899) #14	TEF (ENSRROG00000045709) #15	PHF5A (ENSRROG00000038952) #16	ACO2 (ENSRROG00000005066) #17	POLR3H (ENSRROG00000033728) #18	CSDC2 (ENSRROG00000042848) #19	PMM1 (ENSRROG00000027395) #20	DESI1 (ENSRROG00000039283) #21	ENSRROG00000030297 #22	SNU13 (ENSRROG00000042542) #23	MEI1 (ENSRROG00000043986) #24	CCDC134 (ENSRROG00000030513) #25	SREBF2 (ENSRROG00000032435) #27	ENSRROG00000043046 #28	TNFRSF13C (ENSRROG00000042222) #29	CENPM (ENSRROG00000015719) #31	SMIM45 (ENSRROG00000024066) #32	ENSRROG00000042957	ENSRROG00000042463 #34	WBP2NL (ENSRROG00000041190) #35	NAGA (ENSRROG00000007058) #36	SMDT1 (ENSRROG00000036691)	NDUFA6 (ENSRROG00000031451)	ENSRROG00000013355
Simiiformes	ANCESTRAL SPECIES	68																ENSGT00940000153239.B.j.a ##22	ENSGT00550000074840.y.b.a.a ##23
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	97																ENSGT00940000153239.B.j.a.a ##22	ENSGT00550000074840.y.b.a.a ##23
Cebidae	DUPLICATION
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.a.a ##22
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.a.a.a ##22
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	284												ENSCCAG00000032083	ENSCCAG00000021082	KCNK9 (ENSCCAG00000024965)	TRAPPC9 (ENSCCAG00000030541)	ENSCCAG00000022042 ##22	ENSCCAG00000033163	AGO2 (ENSCCAG00000035031)	PTK2 (ENSCCAG00000025146)	ENSCCAG00000021581	SRPX (ENSCCAG00000025497)	SYTL5 (ENSCCAG00000032709)
Capuchin	MODERN SPECIES	162		PPP4R1 (ENSCCAG00000023335)	ENSCCAG00000037472	RALBP1 (ENSCCAG00000023709)	TWSG1 (ENSCCAG00000015677)	ANKRD12 (ENSCCAG00000027145)	NDUFV2 (ENSCCAG00000025556)	ENSCCAG00000032300	MTCL1 (ENSCCAG00000034435)	RAB12 (ENSCCAG00000022862)	PTPRM (ENSCCAG00000030484)	LRRC30 (ENSCCAG00000032058)	LAMA1 (ENSCCAG00000024596)	ARHGAP28 (ENSCCAG00000020308)	L3MBTL4 (ENSCCAG00000022099)	ENSCCAG00000037663 ##22	EPB41L3 (ENSCCAG00000009201)	ENSCCAG00000035725	AKAIN1 (ENSCCAG00000026295)
Bolivian squirrel monkey	MODERN SPECIES	83	ZDHHC19 (ENSSBOG00000023855)	SLC51A (ENSSBOG00000035030)	PCYT1A (ENSSBOG00000030881)	DYNLT2B (ENSSBOG00000035009)	TM4SF19 (ENSSBOG00000024713)	UBXN7 (ENSSBOG00000013375)	HIGD1A (ENSSBOG00000023996)	CCDC13 (ENSSBOG00000023207)	HHATL (ENSSBOG00000024436)	KLHL40 (ENSSBOG00000011999)	ZBTB47 (ENSSBOG00000020906)	NKTR (ENSSBOG00000025690)	SS18L2 (ENSSBOG00000034669)	SEC22C (ENSSBOG00000026691)	VIPR1 (ENSSBOG00000024575)	ENSSBOG00000029908 ##22	LYZL4 (ENSSBOG00000027775)	CCK (ENSSBOG00000033135)	TRAK1 (ENSSBOG00000032535)	ULK4 (ENSSBOG00000025306)	CTNNB1 (ENSSBOG00000029343)	ENSSBOG00000020059	ZNF621 (ENSSBOG00000026141)	ENSSBOG00000036271	ZNF619 (ENSSBOG00000026928)	RPL14 (ENSSBOG00000035638)	ENTPD3 (ENSSBOG00000022109)	EIF1B (ENSSBOG00000023951)	MYRIP (ENSSBOG00000025361)	ENSSBOG00000031214	SLC25A38 (ENSSBOG00000020530)
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.a.a.b ##22
Bolivian squirrel monkey	MODERN SPECIES	54	CPNE4 (ENSSBOG00000025333)	ACP3 (ENSSBOG00000020690)	DNAJC13 (ENSSBOG00000034021)	ACAD11 (ENSSBOG00000033693)	UBA5 (ENSSBOG00000020398)	NPHP3 (ENSSBOG00000034548)	TMEM108 (ENSSBOG00000011724)	BFSP2 (ENSSBOG00000028849)	ENSSBOG00000018329	TOPBP1 (ENSSBOG00000024009)	TF (ENSSBOG00000031489)	SRPRB (ENSSBOG00000015129)	RAB6B (ENSSBOG00000032178)	ENSSBOG00000022800	SLCO2A1 (ENSSBOG00000005126)	ENSSBOG00000025080 ##22	ZIC4 (ENSSBOG00000033853)	ZIC1 (ENSSBOG00000036128)	AGTR1 (ENSSBOG00000028954)	CPB1 (ENSSBOG00000028899)	CPA3 (ENSSBOG00000035859)	GYG1 (ENSSBOG00000035071)	HLTF (ENSSBOG00000035436)	HPS3 (ENSSBOG00000029336)	CP (ENSSBOG00000020804)	ENSSBOG00000030239	TM4SF18 (ENSSBOG00000030715)	TM4SF1 (ENSSBOG00000013839)	TM4SF4 (ENSSBOG00000023962)	WWTR1 (ENSSBOG00000022386)	ENSSBOG00000021576
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000163470	ENSGT00940000155618.ab	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203.a #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518.w.a #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.a.a.b ##22	ENSGT00940000153239.B.j.b #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724.a #32	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Marmoset	DUPLICATION
Marmoset	DUPLICATION
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	17	HS3ST3B1 (ENSCJAG00000043789)	COX10 (ENSCJAG00000041859)	HS3ST3A1 (ENSCJAG00000044142)	ENSCJAG00000058033	ENSCJAG00000074121	ELAC2 (ENSCJAG00000004542)	ENSCJAG00000074628	ARHGAP44 (ENSCJAG00000004605)	ENSCJAG00000074806	MYOCD (ENSCJAG00000004683)	ENSCJAG00000072512	ENSCJAG00000004752	ZNF18 (ENSCJAG00000045900)	ENSCJAG00000080756	DNAH9 (ENSCJAG00000004802)	ENSCJAG00000087313 ##22	SHISA6 (ENSCJAG00000004887)	PIRT (ENSCJAG00000047584)	TMEM238L (ENSCJAG00000047512)	TMEM220 (ENSCJAG00000013186)	ADPRM (ENSCJAG00000013179)	SCO1 (ENSCJAG00000013168)	MYH3 (ENSCJAG00000012860)	MYH4 (ENSCJAG00000007663)	MYH8 (ENSCJAG00000046689)	MYH13 (ENSCJAG00000041650)	GAS7 (ENSCJAG00000012759)	RCVRN (ENSCJAG00000012758)	GLP2R (ENSCJAG00000012719)	GSG1L2 (ENSCJAG00000012714)	DHRS7C (ENSCJAG00000012700)
Marmoset	MODERN SPECIES		ENSCJAG00000072390	ENSCJAG00000077648	ENSCJAG00000072156	ENSCJAG00000062836	CARNMT1 (ENSCJAG00000001131)	TRPM6 (ENSCJAG00000001156)	RORB (ENSCJAG00000001216)	ENSCJAG00000081023	ENSCJAG00000081400	ENSCJAG00000075591	ENSCJAG00000070549	ANXA1 (ENSCJAG00000001252)	ENSCJAG00000073281	ALDH1A1 (ENSCJAG00000001331)	TMC1 (ENSCJAG00000001348)	ENSCJAG00000073944 ##22	ENSCJAG00000086454	GDA (ENSCJAG00000001414)	ZFAND5 (ENSCJAG00000067211)	ENSCJAG00000023403	C9orf85 (ENSCJAG00000042660)	ABHD17B (ENSCJAG00000001448)	CEMIP2 (ENSCJAG00000001452)	TRPM3 (ENSCJAG00000001494)	ENSCJAG00000086499	KLF9 (ENSCJAG00000086654)	SMC5 (ENSCJAG00000001577)	MAMDC2 (ENSCJAG00000001644)	ENSCJAG00000076761	CFAP95 (ENSCJAG00000043410)	PTAR1 (ENSCJAG00000001663)
Marmoset	MODERN SPECIES	7	ENSCJAG00000084327	CEBPD (ENSCJAG00000013678)	SPIDR (ENSCJAG00000013681)	ENSCJAG00000033335	ENSCJAG00000059708	ENSCJAG00000058055	ENSCJAG00000051249	ENSCJAG00000074471	ENSCJAG00000084672	LYPLA1 (ENSCJAG00000011562)	ENSCJAG00000061327	SOX17 (ENSCJAG00000067378)	RP1 (ENSCJAG00000016695)	ENSCJAG00000077562	XKR4 (ENSCJAG00000016679)	ENSCJAG00000053100 ##22	TMEM68 (ENSCJAG00000038709)	TGS1 (ENSCJAG00000016657)	LYN (ENSCJAG00000016635)	ENSCJAG00000016631	MOS (ENSCJAG00000021905)	PLAG1 (ENSCJAG00000016621)	CHCHD7 (ENSCJAG00000043436)	SDR16C5 (ENSCJAG00000016608)	ENSCJAG00000054039	PENK (ENSCJAG00000016597)	ENSCJAG00000073317	ENSCJAG00000082207	IMPAD1 (ENSCJAG00000016573)	ENSCJAG00000061141	ENSCJAG00000073997
Marmoset	MODERN SPECIES	15	GNPDA2 (ENSCJAG00000019049)	GUF1 (ENSCJAG00000019056)	YIPF7 (ENSCJAG00000019090)	KCTD8 (ENSCJAG00000019097)	ENSCJAG00000019100	GRXCR1 (ENSCJAG00000019104)	ENSCJAG00000061038	ATP8A1 (ENSCJAG00000019105)	SHISA3 (ENSCJAG00000084799)	ENSCJAG00000087388	BEND4 (ENSCJAG00000019212)	SLC30A9 (ENSCJAG00000019226)	TMEM33 (ENSCJAG00000038683)	PHOX2B (ENSCJAG00000039048)	LIMCH1 (ENSCJAG00000019269)	ENSCJAG00000086935 ##22	ENSCJAG00000019346	APBB2 (ENSCJAG00000019363)	NSUN7 (ENSCJAG00000019381)	RBM47 (ENSCJAG00000019385)	CHRNA9 (ENSCJAG00000019397)	RHOH (ENSCJAG00000019407)	N4BP2 (ENSCJAG00000019411)	ENSCJAG00000044209	PDS5A (ENSCJAG00000019428)	UBE2K (ENSCJAG00000041652)	SMIM14 (ENSCJAG00000077743)	ENSCJAG00000044411	LIAS (ENSCJAG00000000710)	RPL9 (ENSCJAG00000000723)	KLB (ENSCJAG00000000729)
Cebidae_a	ANCESTRAL SPECIES	40	ENSGT00390000001347.vb.b.b	ENSGT00940000153657.A	ENSGT00940000155618.ab	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203.a #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00390000018518.w.a #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.j.a.a.b ##22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724.a #32	ENSGT00910000147647	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00390000017489	ENSGT00390000018898.y	ENSGT00940000153331.hb
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	435	XPNPEP3 (ENSCCAG00000024069)	RBX1 (ENSCCAG00000037465)	EP300 (ENSCCAG00000036735)	ENSCCAG00000035552	L3MBTL2 (ENSCCAG00000001271) #10	CHADL (ENSCCAG00000031153) #11	ENSCCAG00000024962 #13	ZC3H7B (ENSCCAG00000027974) #14	TEF (ENSCCAG00000033688) #15	ENSCCAG00000037141 #16	ACO2 (ENSCCAG00000028378) #17	POLR3H (ENSCCAG00000025802) #18	CSDC2 (ENSCCAG00000029849) #19	PMM1 (ENSCCAG00000034441) #20	DESI1 (ENSCCAG00000037020) #21	ENSCCAG00000030468 ##22	ENSCCAG00000031213 #23	MEI1 (ENSCCAG00000033076) #24	CCDC134 (ENSCCAG00000019608) #25	SREBF2 (ENSCCAG00000025566) #27	SHISA8 (ENSCCAG00000029382) #28	TNFRSF13C (ENSCCAG00000036813) #29	CENPM (ENSCCAG00000032494) #31	SMIM45 (ENSCCAG00000005363) #32	ENSCCAG00000022439 #34	ENSCCAG00000037760 #35	NAGA (ENSCCAG00000037174) #36	SMDT1 (ENSCCAG00000024549)	ENSCCAG00000036946	CYP2D6 (ENSCCAG00000020990)	CYP2D8 (ENSCCAG00000034203)
Capuchin	MODERN SPECIES	117	SLC26A1 (ENSCCAG00000026035)	DGKQ (ENSCCAG00000030615)	TMEM175 (ENSCCAG00000032889)	GAK (ENSCCAG00000035657)	CPLX1 (ENSCCAG00000021219)	ENSCCAG00000034446	PCGF3 (ENSCCAG00000032635)	ENSCCAG00000021759	SLC49A3 (ENSCCAG00000028444)	MYL5 (ENSCCAG00000028429)	ATP5ME (ENSCCAG00000018522)	ENSCCAG00000033248	PDE6B (ENSCCAG00000035855)	TMEM271 (ENSCCAG00000001350)	PIGG (ENSCCAG00000026828)	ENSCCAG00000030041 ##22	HTR1E (ENSCCAG00000020307)	CGA (ENSCCAG00000034533)	ZNF292 (ENSCCAG00000024199)	SMIM8 (ENSCCAG00000032274)	C6orf163 (ENSCCAG00000032617)	CFAP206 (ENSCCAG00000037397)	SLC35A1 (ENSCCAG00000029115)	RARS2 (ENSCCAG00000031089)	ENSCCAG00000033503	ENSCCAG00000021717	AKIRIN2 (ENSCCAG00000022644)
Bolivian squirrel monkey	MODERN SPECIES	94	XPNPEP3 (ENSSBOG00000034216)	RBX1 (ENSSBOG00000023412)	EP300 (ENSSBOG00000027132)	L3MBTL2 (ENSSBOG00000028967) #10	CHADL (ENSSBOG00000032007) #11	ENSSBOG00000022447 #13	ZC3H7B (ENSSBOG00000034962) #14	TEF (ENSSBOG00000024378) #15	ENSSBOG00000015322	ENSSBOG00000025096 ##16	ENSSBOG00000029050 #17	POLR3H (ENSSBOG00000020652) #18	CSDC2 (ENSSBOG00000035590) #19	PMM1 (ENSSBOG00000035346) #20	DESI1 (ENSSBOG00000023969) #21	ENSSBOG00000024724 ##22	ENSSBOG00000024134 ##23	MEI1 (ENSSBOG00000026823) #24	CCDC134 (ENSSBOG00000030156) #25	SREBF2 (ENSSBOG00000032953) #27	SHISA8 (ENSSBOG00000031370) #28	TNFRSF13C (ENSSBOG00000030226) #29	CENPM (ENSSBOG00000031289) #31	SMIM45 (ENSSBOG00000018953) #32	ENSSBOG00000034678	ENSSBOG00000024825 #34	ENSSBOG00000029774 #35	NAGA (ENSSBOG00000019954) #36	SMDT1 (ENSSBOG00000031212)	ENSSBOG00000021327	CYP2D6 (ENSSBOG00000028747)
Mas night monkey	MODERN SPECIES	343										ENSANAG00000016213	ENSANAG00000020677	EEF1AKMT1 (ENSANAG00000022105)	ENSANAG00000037483	ENSANAG00000019456	LATS2 (ENSANAG00000031791)	ENSANAG00000023445 ##22	SAP18 (ENSANAG00000000055)	SKA3 (ENSANAG00000034652)	ENSANAG00000032442	IFT88 (ENSANAG00000034961)	CRYL1 (ENSANAG00000030981)	GJB6 (ENSANAG00000009383)	GJB2 (ENSANAG00000011483)	ZMYM2 (ENSANAG00000034557)	ENSANAG00000030102	ZMYM5 (ENSANAG00000020820)	ENSANAG00000032516	PSPC1 (ENSANAG00000000059)	MPHOSPH8 (ENSANAG00000020044)	ENSANAG00000020843	ENSANAG00000010505
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.b.a ##22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.b.a ##22
Marmoset	MODERN SPECIES	7	CPNE3 (ENSCJAG00000000264)	RMDN1 (ENSCJAG00000000279)	WWP1 (ENSCJAG00000000292)	ENSCJAG00000074197	ATP6V0D2 (ENSCJAG00000000343)	PSKH2 (ENSCJAG00000000346)	ENSCJAG00000056422	CA2 (ENSCJAG00000000351)	CA3 (ENSCJAG00000000369)	ENSCJAG00000000373	RBIS (ENSCJAG00000079645)	E2F5 (ENSCJAG00000000387)	LRRCC1 (ENSCJAG00000000393)	RALYL (ENSCJAG00000000402)	ENSCJAG00000070743	ENSCJAG00000080227 ##22	ENSCJAG00000077433	SNX16 (ENSCJAG00000000407)	CHMP4C (ENSCJAG00000000415)	ZFAND1 (ENSCJAG00000066942)	SLC10A5 (ENSCJAG00000023158)	IMPA1 (ENSCJAG00000000425)	ENSCJAG00000079997	FABP12 (ENSCJAG00000000433)	FABP4 (ENSCJAG00000041930)	FABP9 (ENSCJAG00000000441)	PMP2 (ENSCJAG00000085806)	ENSCJAG00000061348	PAG1 (ENSCJAG00000000451)	ZNF704 (ENSCJAG00000000453)	ZBTB10 (ENSCJAG00000000454)
Mas night monkey	MODERN SPECIES	627	PPP4R1 (ENSANAG00000025812)	ENSANAG00000029139	RALBP1 (ENSANAG00000028016)	ENSANAG00000019879	TWSG1 (ENSANAG00000029741)	ANKRD12 (ENSANAG00000029102)	NDUFV2 (ENSANAG00000021943)	MTCL1 (ENSANAG00000014340)	RAB12 (ENSANAG00000021061)	PTPRM (ENSANAG00000034856)	LRRC30 (ENSANAG00000020024)	LAMA1 (ENSANAG00000028013)	ARHGAP28 (ENSANAG00000036554)	L3MBTL4 (ENSANAG00000025058)	TMEM200C (ENSANAG00000023265)	ENSANAG00000035230 ##22	EPB41L3 (ENSANAG00000020372)	ENSANAG00000035293	AKAIN1 (ENSANAG00000025419)	ENSANAG00000007877	DLGAP1 (ENSANAG00000021635)	ENSANAG00000037343	TGIF1 (ENSANAG00000020401)	ENSANAG00000029379	MYL12B (ENSANAG00000028363)	ENSANAG00000019883	MYOM1 (ENSANAG00000023556)	LPIN2 (ENSANAG00000034006)	EMILIN2 (ENSANAG00000033716)	ENSANAG00000023466	SMCHD1 (ENSANAG00000035458)
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.b.b.a ##22
Mas night monkey	MODERN SPECIES	1286										NAP1L2 (ENSANAG00000031289)	ENSANAG00000025337	CDX4 (ENSANAG00000020886)	ENSANAG00000020039	ENSANAG00000021581	ENSANAG00000030307	ENSANAG00000020017 ##22	CHIC1 (ENSANAG00000025271)	ENSANAG00000029132	ENSANAG00000026335	ZCCHC13 (ENSANAG00000019917)
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.b.b.a ##22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a.b.b.a ##22
Bolivian squirrel monkey	MODERN SPECIES	53	RALBP1 (ENSSBOG00000024870)	TWSG1 (ENSSBOG00000035288)	ENSSBOG00000029909	NDUFV2 (ENSSBOG00000035610)	ENSSBOG00000025300	MTCL1 (ENSSBOG00000031217)	RAB12 (ENSSBOG00000021125)	PTPRM (ENSSBOG00000035977)	LRRC30 (ENSSBOG00000009092)	ENSSBOG00000018693	LAMA1 (ENSSBOG00000033137)	ENSSBOG00000036132	ARHGAP28 (ENSSBOG00000031680)	L3MBTL4 (ENSSBOG00000023649)	TMEM200C (ENSSBOG00000034209)	ENSSBOG00000025802 ##22	EPB41L3 (ENSSBOG00000024756)	ZBTB14 (ENSSBOG00000034371)	AKAIN1 (ENSSBOG00000031954)	ENSSBOG00000035366	ENSSBOG00000031178	DLGAP1 (ENSSBOG00000031193)	TGIF1 (ENSSBOG00000036056)	ENSSBOG00000022177	MYL12A (ENSSBOG00000019169)	MYOM1 (ENSSBOG00000036143)	LPIN2 (ENSSBOG00000026923)	EMILIN2 (ENSSBOG00000029862)	SMCHD1 (ENSSBOG00000030266)	NDC80 (ENSSBOG00000035772)	METTL4 (ENSSBOG00000033623)
Platyrrhini	ANCESTRAL SPECIES	23	ENSGT00390000000917	ENSGT00940000161024	ENSGT00940000157234	ENSGT00940000157678	ENSGT00940000161407	ENSGT00940000158920	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT00940000155696	ENSGT00860000135871	ENSGT00730000111249	ENSGT00940000155868	ENSGT00910000146674	ENSGT00950000182808.a.a.a.a.a	ENSGT00940000153239.B.j.a.b.b.b ##22	ENSGT00940000159229	ENSGT00510000048601.a	ENSGT00940000158318	ENSGT00940000162655	ENSGT00940000167709	ENSGT00940000156596	ENSGT00390000014623	ENSGT00910000147281	ENSGT00940000156984	ENSGT01100000263555.a.a.b	ENSGT00940000156023	ENSGT00940000158521	ENSGT00390000010543	ENSGT00940000156083	ENSGT00940000160645
Cebidae	ANCESTRAL SPECIES	26	ENSGT00390000006347.b	ENSGT00390000000917	ENSGT00940000161024	ENSGT00940000157234	ENSGT00940000157678	ENSGT00940000161407	ENSGT00940000158920	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT00940000155696	ENSGT00860000135871	ENSGT00730000111249	ENSGT00940000155868	ENSGT00950000182808.a.a.a.a.a	ENSGT00940000153239.B.j.a.b.b.b ##22	ENSGT00940000159229	ENSGT00510000048601.a	ENSGT00940000158318	ENSGT00940000162655	ENSGT00940000167709	ENSGT00940000156596	ENSGT00390000014623	ENSGT00910000147281	ENSGT00940000156984	ENSGT01100000263555.a.a.b	ENSGT00940000156023	ENSGT00940000158521	ENSGT00390000010543	ENSGT00940000156083	ENSGT00940000160645
Cebidae_a	ANCESTRAL SPECIES	60	ENSGT00390000006347.b	ENSGT00390000000917	ENSGT00940000161024	ENSGT00940000157234	ENSGT00940000157678	ENSGT00940000161407	ENSGT00940000158920	ENSGT00940000157536.b	ENSGT00940000158114	ENSGT00860000133881	ENSGT00940000155696	ENSGT00860000135871	ENSGT00730000111249	ENSGT00940000155868	ENSGT00950000182808.a.a.a.a.a	ENSGT00940000153239.B.j.a.b.b.b ##22	ENSGT00940000159229	ENSGT00510000048601.a	ENSGT00940000158318	ENSGT00940000162655	ENSGT00940000167709	ENSGT00940000156596	ENSGT00390000014623	ENSGT00910000147281	ENSGT00940000156984	ENSGT01100000263555.a.a.b	ENSGT00940000156023	ENSGT00940000158521	ENSGT00940000156083	ENSGT00940000160645	ENSGT00940000154200.A.a
Bolivian squirrel monkey	MODERN SPECIES	70	IRS2 (ENSSBOG00000033562)	MYO16 (ENSSBOG00000036268)	TNFSF13B (ENSSBOG00000033235)	ABHD13 (ENSSBOG00000019782)	LIG4 (ENSSBOG00000019029)	ENSSBOG00000024651	ENSSBOG00000023659	ENSSBOG00000035667	NALF1 (ENSSBOG00000025953)	ENSSBOG00000021398	ARGLU1 (ENSSBOG00000025713)	EFNB2 (ENSSBOG00000030780)	ENSSBOG00000021042	ENSSBOG00000025314	SLC10A2 (ENSSBOG00000033035)	ENSSBOG00000027930 ##22	METTL21EP (ENSSBOG00000032455)	ENSSBOG00000024890	POGLUT2 (ENSSBOG00000019020)	TEX30 (ENSSBOG00000021338)	ENSSBOG00000018830	METTL21C (ENSSBOG00000025136)	TPP2 (ENSSBOG00000019200)	ENSSBOG00000028923	FGF14 (ENSSBOG00000033114)	ENSSBOG00000017267	ITGBL1 (ENSSBOG00000036065)	NALCN (ENSSBOG00000026898)	TMTC4 (ENSSBOG00000024986)	ENSSBOG00000028711	PCCA (ENSSBOG00000020005)
Capuchin	MODERN SPECIES	14	NAXD (ENSCCAG00000034469)	RAB20 (ENSCCAG00000034119)	COL4A2 (ENSCCAG00000035596)	COL4A1 (ENSCCAG00000022300)	IRS2 (ENSCCAG00000022219)	MYO16 (ENSCCAG00000024956)	TNFSF13B (ENSCCAG00000021250)	ABHD13 (ENSCCAG00000020068)	LIG4 (ENSCCAG00000019971)	ENSCCAG00000026648	NALF1 (ENSCCAG00000024975)	ENSCCAG00000023873	ARGLU1 (ENSCCAG00000021999)	EFNB2 (ENSCCAG00000037896)	SLC10A2 (ENSCCAG00000035610)	ENSCCAG00000033516 ##22	METTL21EP (ENSCCAG00000023894)	ENSCCAG00000024877	POGLUT2 (ENSCCAG00000020346)	TEX30 (ENSCCAG00000032005)	ENSCCAG00000027295	METTL21C (ENSCCAG00000032484)	TPP2 (ENSCCAG00000023468)	FGF14 (ENSCCAG00000026756)	ENSCCAG00000033559	ITGBL1 (ENSCCAG00000023245)
Mas night monkey	MODERN SPECIES	964				IRS2 (ENSANAG00000023271)	MYO16 (ENSANAG00000030011)	TNFSF13B (ENSANAG00000031847)	ABHD13 (ENSANAG00000031542)	LIG4 (ENSANAG00000012446)	ENSANAG00000022561	NALF1 (ENSANAG00000022602)	ENSANAG00000028970	ARGLU1 (ENSANAG00000025331)	EFNB2 (ENSANAG00000023792)	ENSANAG00000030812	SLC10A2 (ENSANAG00000027554)	ENSANAG00000025711 ##22	ENSANAG00000020094	POGLUT2 (ENSANAG00000029223)	TEX30 (ENSANAG00000020101)	METTL21C (ENSANAG00000029712)	TPP2 (ENSANAG00000001887)	FGF14 (ENSANAG00000021289)	ITGBL1 (ENSANAG00000020933)	NALCN (ENSANAG00000002054)	TMTC4 (ENSANAG00000033527)	ENSANAG00000035775	PCCA (ENSANAG00000031162)	ENSANAG00000025412	ZIC2 (ENSANAG00000023192)	ZIC5 (ENSANAG00000036116)	CLYBL (ENSANAG00000034396)
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.B.j.a ##22
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00940000154972	ENSGT00940000161201	ENSGT00940000166837	ENSGT00940000155374	ENSGT00390000006832	ENSGT00940000160946	ENSGT00530000064765	ENSGT00390000017980	ENSGT00390000006330.a.a.j	ENSGT00940000160515	ENSGT00940000153299.d.v.a	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000157029	ENSGT00730000111366	ENSGT00940000153239.B.j.a ##22	ENSGT00390000009760.d	ENSGT00540000073886	ENSGT00390000012182	ENSGT00940000161825.c	ENSGT00940000165348	ENSGT00940000165994	ENSGT00940000163633	ENSGT00940000158388	ENSGT00940000164167	ENSGT00940000156803	ENSGT00970000197053	ENSGT00950000182974.a.a.a.a	ENSGT00910000148734	ENSGT00390000007953	ENSGT00950000183189.a.b.b
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000154972	ENSGT00940000161201	ENSGT00940000166837	ENSGT00940000155374	ENSGT00390000006832	ENSGT00940000160946	ENSGT00530000064765	ENSGT00390000017980	ENSGT00390000006330.a.a.j	ENSGT00940000160515	ENSGT00940000153299.c.b.b.b.c.a	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000157029	ENSGT00730000111366	ENSGT00940000153239.B.j.a ##22	ENSGT00390000009760.d	ENSGT00540000073886	ENSGT00390000012182	ENSGT00940000161825.c	ENSGT00940000165348	ENSGT00940000165994	ENSGT00940000163633	ENSGT00940000158388	ENSGT00940000164167	ENSGT00940000156803	ENSGT00970000197053	ENSGT00950000182974.a.a.a.a	ENSGT00910000148734	ENSGT00390000007953	ENSGT00950000183189.a.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000154972	ENSGT00940000161201	ENSGT00940000166837	ENSGT00940000155374	ENSGT00390000006832	ENSGT00940000160946	ENSGT00530000064765	ENSGT00390000017980	ENSGT00390000006330.a.a.j	ENSGT00940000160515	ENSGT00940000153299.c.a.a.a.b.c	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000157029	ENSGT00730000111366	ENSGT00940000153239.B.j.a ##22	ENSGT00390000009760.d	ENSGT00540000073886	ENSGT00940000164167	ENSGT00940000158388	ENSGT00940000163633	ENSGT00940000165994	ENSGT00940000165348	ENSGT00940000161825.c	ENSGT00390000012182	ENSGT00940000156803.g.a	ENSGT00970000197053	ENSGT00940000156803.g.b	ENSGT00950000182974.a.a.a.a	ENSGT00390000018324.f	ENSGT00390000007953
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000154972	ENSGT00940000161201	ENSGT00940000166837	ENSGT00940000155374	ENSGT00390000006832	ENSGT00940000160946	ENSGT00530000064765	ENSGT00390000017980	ENSGT00390000006330.a.a.j	ENSGT00940000160515	ENSGT00940000153299.c.a.a.a.b.c	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000157029	ENSGT00730000111366	ENSGT00940000153239.B.j.a ##22	ENSGT00390000009760.d	ENSGT00540000073886	ENSGT00940000164167	ENSGT00940000158388	ENSGT00940000163633	ENSGT00940000165994	ENSGT00940000165348	ENSGT00940000161825.c	ENSGT00390000012182	ENSGT00940000156803.g.a	ENSGT00970000197053	ENSGT00950000182974.a.a.a.a	ENSGT00390000018324.f	ENSGT00390000007953	ENSGT00950000183189.a.b.b
Pan	ANCESTRAL SPECIES	6	ENSGT00940000154972	ENSGT00940000161201	ENSGT00940000166837	ENSGT00940000155374	ENSGT00390000006832	ENSGT00940000160946	ENSGT00530000064765	ENSGT00390000017980	ENSGT00390000006330.a.a.j	ENSGT00940000160515	ENSGT00940000153299.c.a.a.a.b.c	ENSGT00940000154344.a	ENSGT00940000153669.b	ENSGT00940000157029	ENSGT00730000111366	ENSGT00940000153239.B.j.a ##22	ENSGT00390000009760.d	ENSGT00540000073886	ENSGT00390000012182	ENSGT00940000161825.c	ENSGT00940000164167	ENSGT00940000158388	ENSGT00940000163633	ENSGT00940000165994	ENSGT00940000165348	ENSGT00940000156803.g.a	ENSGT00950000182974.a.a.a.a	ENSGT00390000018324.f	ENSGT00390000007953	ENSGT00950000183189.a.b.b	ENSGT00510000055407
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	873															MAMLD1 (ENSPTRG00000044895)	ENSPTRG00000043309 ##22
Chimpanzee	MODERN SPECIES	972	MAGEA10 (ENSPTRG00000022382)	GABRE (ENSPTRG00000022380)	ENSPTRG00000042701	CNGA2 (ENSPTRG00000022378)	FATE1 (ENSPTRG00000022377)	PRRG3 (ENSPTRG00000022376)	PASD1 (ENSPTRG00000022374)	VMA21 (ENSPTRG00000044277)	ENSPTRG00000052881	GPR50 (ENSPTRG00000028172)	HMGB3 (ENSPTRG00000022371)	CD99L2 (ENSPTRG00000022369)	MTMR1 (ENSPTRG00000022368)	MTM1 (ENSPTRG00000049119)	ENSPTRG00000022365	ENSPTRG00000040111 ##22	ENSPTRG00000043276	ENSPTRG00000022357	ENSPTRG00000049979	ENSPTRG00000042941	MAGEA8 (ENSPTRG00000051529)	ENSPTRG00000050162	ENSPTRG00000022359	TMEM185A (ENSPTRG00000046347)	MAGEA9 (ENSPTRG00000044086)	MAGEA11 (ENSPTRG00000022358)	ENSPTRG00000050308	IDS (ENSPTRG00000051038)	AFF2 (ENSPTRG00000022353)	ENSPTRG00000044524	ENSPTRG00000042813
Bonobo	MODERN SPECIES	369	GABRA3 (ENSPPAG00000031555)	MAGEA10 (ENSPPAG00000004915)	GABRE (ENSPPAG00000026812)	CNGA2 (ENSPPAG00000038386)	FATE1 (ENSPPAG00000040197)	PRRG3 (ENSPPAG00000041513)	PASD1 (ENSPPAG00000042693)	ENSPPAG00000000054	ENSPPAG00000034685	GPR50 (ENSPPAG00000040190)	ENSPPAG00000037898	ENSPPAG00000022458	MTMR1 (ENSPPAG00000037780)	MTM1 (ENSPPAG00000036663)	ENSPPAG00000044034	ENSPPAG00000043936 ##22	ENSPPAG00000043892	ENSPPAG00000040929	ENSPPAG00000033335	ENSPPAG00000025248	MAGEA11 (ENSPPAG00000029720)	TMEM185A (ENSPPAG00000041974)	ENSPPAG00000032708	IDS (ENSPPAG00000039933)	AFF2 (ENSPPAG00000040251)	ENSPPAG00000043764	ENSPPAG00000038877	FMR1NB (ENSPPAG00000032015)	FMR1 (ENSPPAG00000041836)	ENSPPAG00000024208	SLITRK2 (ENSPPAG00000026296)
Gorilla	MODERN SPECIES	523	GABRA3 (ENSGGOG00000034961)	MAGEA10 (ENSGGOG00000015264)	GABRE (ENSGGOG00000001378)	CNGA2 (ENSGGOG00000012911)	FATE1 (ENSGGOG00000012915)	PRRG3 (ENSGGOG00000012920)	PASD1 (ENSGGOG00000005844)	VMA21 (ENSGGOG00000015481)	ENSGGOG00000042023	GPR50 (ENSGGOG00000012815)	ENSGGOG00000027164	CD99L2 (ENSGGOG00000005022)	MTMR1 (ENSGGOG00000005018)	MTM1 (ENSGGOG00000012689)	ENSGGOG00000016675	ENSGGOG00000026303 ##22	ENSGGOG00000022151	ENSGGOG00000039658	ENSGGOG00000022770	MAGEA11 (ENSGGOG00000027734)	TMEM185A (ENSGGOG00000024268)	ENSGGOG00000022734	ENSGGOG00000022043	ENSGGOG00000040386	ENSGGOG00000036241	ENSGGOG00000006912	AFF2 (ENSGGOG00000010543)	ENSGGOG00000022472	FMR1NB (ENSGGOG00000011460)	FMR1 (ENSGGOG00000010373)	ENSGGOG00000040180
Orangutan	MODERN SPECIES	242	GABRQ (ENSPPYG00000020829)	GABRA3 (ENSPPYG00000020828)	GABRE (ENSPPYG00000020826)	MAGEA4 (ENSPPYG00000029984)	CNGA2 (ENSPPYG00000020824)	FATE1 (ENSPPYG00000020823)	PRRG3 (ENSPPYG00000020822)	PASD1 (ENSPPYG00000020821)	VMA21 (ENSPPYG00000020820)	GPR50 (ENSPPYG00000020819)	HMGB3 (ENSPPYG00000020818)	CD99L2 (ENSPPYG00000020817)	MTMR1 (ENSPPYG00000020816)	MTM1 (ENSPPYG00000020815)	MAMLD1 (ENSPPYG00000020814)	ENSPPYG00000037745 ##22	ENSPPYG00000020813	ENSPPYG00000033750	ENSPPYG00000030750	MAGEA8 (ENSPPYG00000020811)	ENSPPYG00000020908	ENSPPYG00000030759	ENSPPYG00000033696	ENSPPYG00000036522	ENSPPYG00000032567	ENSPPYG00000020804	ENSPPYG00000032611	ENSPPYG00000020803	IDS (ENSPPYG00000020802)	ENSPPYG00000040118	AFF2 (ENSPPYG00000020800)
Gibbon	MODERN SPECIES	449	GABRA3 (ENSNLEG00000013803)	MAGEA10 (ENSNLEG00000013792)	GABRE (ENSNLEG00000013764)	CNGA2 (ENSNLEG00000013742)	FATE1 (ENSNLEG00000013728)	PRRG3 (ENSNLEG00000013726)	PASD1 (ENSNLEG00000013677)	ENSNLEG00000029424	ENSNLEG00000027887	GPR50 (ENSNLEG00000013674)	ENSNLEG00000035349	CD99L2 (ENSNLEG00000033441)	MTMR1 (ENSNLEG00000013597)	MTM1 (ENSNLEG00000013579)	ENSNLEG00000013570	ENSNLEG00000034343 ##22	ENSNLEG00000013566	ENSNLEG00000031926	ENSNLEG00000034935	ENSNLEG00000018298	MAGEA8 (ENSNLEG00000013517)	MAGEA11 (ENSNLEG00000013500)	TMEM185A (ENSNLEG00000013487)	ENSNLEG00000013483	IDS (ENSNLEG00000013469)	AFF2 (ENSNLEG00000013346)	ENSNLEG00000032792	ENSNLEG00000032474	ENSNLEG00000034229	FMR1 (ENSNLEG00000013269)	ENSNLEG00000013267
Simiiformes	DUPLICATION
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Catarrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Cercopithecidae	ANCESTRAL SPECIES	217															ENSGT00940000165547	ENSGT00940000153239.B.i.a.a ##22
Cercopithecinae	ANCESTRAL SPECIES	218															ENSGT00940000165547	ENSGT00940000153239.B.i.a.a ##22
Cercopithecinae_a	ANCESTRAL SPECIES	221															ENSGT00940000165547	ENSGT00940000153239.B.i.a.a ##22
Macaca	ANCESTRAL SPECIES	171															ENSGT00940000165547	ENSGT00940000153239.B.i.a.a ##22
Pig-tailed macaque	MODERN SPECIES	204	BROX (ENSMNEG00000011074)	ENSMNEG00000035720	MIA3 (ENSMNEG00000031019)	TAF1A (ENSMNEG00000032688)	HHIPL2 (ENSMNEG00000000089)	ENSMNEG00000030688	DUSP10 (ENSMNEG00000029567)	ENSMNEG00000002446	HLX (ENSMNEG00000036814)	MTARC1 (ENSMNEG00000044573)	MTARC2 (ENSMNEG00000038189)	C1orf115 (ENSMNEG00000043488)	MARK1 (ENSMNEG00000027001)	ENSMNEG00000032176	ENSMNEG00000028678	ENSMNEG00000035849 ##22	RAB3GAP2 (ENSMNEG00000030474)	IARS2 (ENSMNEG00000038908)	BPNT1 (ENSMNEG00000038467)	EPRS1 (ENSMNEG00000023887)	SLC30A10 (ENSMNEG00000032165)	ENSMNEG00000012078	LYPLAL1 (ENSMNEG00000028805)	TGFB2 (ENSMNEG00000043377)	RRP15 (ENSMNEG00000044170)	SPATA17 (ENSMNEG00000039678)	GPATCH2 (ENSMNEG00000034969)	ESRRG (ENSMNEG00000042999)	USH2A (ENSMNEG00000030217)	KCTD3 (ENSMNEG00000029482)	KCNK2 (ENSMNEG00000035782)
Macaca_a	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Crab-eating macaque	MODERN SPECIES		TLR5 (ENSMFAG00000029363)	DISP1 (ENSMFAG00000033892)	FAM177B (ENSMFAG00000032058)	BROX (ENSMFAG00000000410)	ENSMFAG00000002217	MIA3 (ENSMFAG00000002094)	TAF1A (ENSMFAG00000039364)	HHIPL2 (ENSMFAG00000036732)	ENSMFAG00000058339	DUSP10 (ENSMFAG00000035766)	HLX (ENSMFAG00000002500)	MTARC2 (ENSMFAG00000032804)	C1orf115 (ENSMFAG00000065552)	MARK1 (ENSMFAG00000039269)	ENSMFAG00000001949	ENSMFAG00000032535 ##22	RAB3GAP2 (ENSMFAG00000035771)	IARS2 (ENSMFAG00000000345)	BPNT1 (ENSMFAG00000003970)	EPRS1 (ENSMFAG00000041902)	SLC30A10 (ENSMFAG00000051013)	ENSMFAG00000030239	LYPLAL1 (ENSMFAG00000003062)	TGFB2 (ENSMFAG00000054210)	RRP15 (ENSMFAG00000046095)	SPATA17 (ENSMFAG00000030832)	GPATCH2 (ENSMFAG00000000617)	ENSMFAG00000055622	ESRRG (ENSMFAG00000004706)	ENSMFAG00000016818	USH2A (ENSMFAG00000043973)
Rhinopithecus	ANCESTRAL SPECIES	189				ENSGT00950000182767.a.a	ENSGT00390000011405	ENSGT00940000161139	ENSGT00390000002944.e.a.a.a.b	ENSGT00940000157671	ENSGT00390000012691.c.b.n	ENSGT00950000183093.C	ENSGT00940000162410	ENSGT00940000159665	ENSGT00390000004585	ENSGT00940000157560.e	ENSGT00940000165547	ENSGT00940000153239.B.i.a.a ##22	ENSGT00390000005794	ENSGT00550000074910	ENSGT00940000157359	ENSGT00550000074815	ENSGT00940000159967	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000011270	ENSGT00410000025698.a	ENSGT00940000153433.B.a.b	ENSGT00940000158456	ENSGT00940000153881.a	ENSGT00940000170416	ENSGT00910000147483
Black snub-nosed monkey	MODERN SPECIES	305	FAM177B (ENSRBIG00000032487)	BROX (ENSRBIG00000002982)	ENSRBIG00000039759	MIA3 (ENSRBIG00000033779)	TAF1A (ENSRBIG00000033404)	HHIPL2 (ENSRBIG00000040993)	ENSRBIG00000037388	DUSP10 (ENSRBIG00000037579)	ENSRBIG00000039941	HLX (ENSRBIG00000013026)	MTARC1 (ENSRBIG00000019755)	MTARC2 (ENSRBIG00000036388)	C1orf115 (ENSRBIG00000022485)	MARK1 (ENSRBIG00000040706)	ENSRBIG00000044372	ENSRBIG00000008972 ##22	RAB3GAP2 (ENSRBIG00000027351)	ENSRBIG00000033068	IARS2 (ENSRBIG00000002958)	BPNT1 (ENSRBIG00000043345)	EPRS1 (ENSRBIG00000034767)	SLC30A10 (ENSRBIG00000028231)	LYPLAL1 (ENSRBIG00000026721)	TGFB2 (ENSRBIG00000013890)	RRP15 (ENSRBIG00000033496)	SPATA17 (ENSRBIG00000037273)	GPATCH2 (ENSRBIG00000028371)	ESRRG (ENSRBIG00000028583)	USH2A (ENSRBIG00000044398)	KCTD3 (ENSRBIG00000042097)	ENSRBIG00000036717
Hominoidea	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Gibbon	MODERN SPECIES	6	DNAJC5B (ENSNLEG00000010568)	ENSNLEG00000028763	PDE7A (ENSNLEG00000003962)	MTFR1 (ENSNLEG00000003936)	ARMC1 (ENSNLEG00000003916)	CYP7B1 (ENSNLEG00000003905)	ENSNLEG00000034961	ENSNLEG00000029731	ENSNLEG00000028285	ENSNLEG00000033907	YTHDF3 (ENSNLEG00000003872)	TTPA (ENSNLEG00000003861)	GGH (ENSNLEG00000003849)	NKAIN3 (ENSNLEG00000003847)	ENSNLEG00000033181	ENSNLEG00000031246 ##22	ENSNLEG00000029861	RPL30 (ENSNLEG00000029825)	MATN2 (ENSNLEG00000003768)	ENSNLEG00000035130	ENSNLEG00000034969	ENSNLEG00000003756	MTDH (ENSNLEG00000003705)	ENSNLEG00000032823	CPQ (ENSNLEG00000003680)	ENSNLEG00000028984	SDC2 (ENSNLEG00000003657)	PTDSS1 (ENSNLEG00000003615)	MTERF3 (ENSNLEG00000003582)	ENSNLEG00000034358	GDF6 (ENSNLEG00000003567)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.a ##22
Cebidae_a	ANCESTRAL SPECIES	54	ENSGT00390000010499	ENSGT00390000003849	ENSGT00390000005213	ENSGT00940000154473.a	ENSGT00940000154004.a	ENSGT00940000159294	ENSGT00940000157658	ENSGT00950000183215.c.a.b	ENSGT00390000014100	ENSGT00940000153141.B.b	ENSGT00940000162962	ENSGT00860000135574	ENSGT00940000158777	ENSGT00940000159203.b	ENSGT00490000043388.b.a	ENSGT00940000153239.B.i.a.a ##22	ENSGT00940000161484	ENSGT00940000156304	ENSGT00940000159947	ENSGT00940000153649.A	ENSGT00940000153886.a.b.f	ENSGT00940000158863	ENSGT00940000159497	ENSGT00940000155059	ENSGT00940000154502	ENSGT00940000153141.B.a	ENSGT00520000055567.a.a.b	ENSGT00950000183056.B.b	ENSGT00940000160216	ENSGT00940000153571.a.eb	ENSGT00950000183149.A
Bolivian squirrel monkey	MODERN SPECIES	116			ENSSBOG00000011006	CRH (ENSSBOG00000008862)	TRIM55 (ENSSBOG00000000046)	DNAJC5B (ENSSBOG00000027072)	PDE7A (ENSSBOG00000003831)	ENSSBOG00000026145	ENSSBOG00000021813	CYP7B1 (ENSSBOG00000030196)	ENSSBOG00000027805	ENSSBOG00000024487	YTHDF3 (ENSSBOG00000035287)	TTPA (ENSSBOG00000026827)	GGH (ENSSBOG00000023367)	ENSSBOG00000030459 ##22	NKAIN3 (ENSSBOG00000027801)	ASPH (ENSSBOG00000030161)	CLVS1 (ENSSBOG00000032167)	CHD7 (ENSSBOG00000021462)	RAB2A (ENSSBOG00000025313)	CA8 (ENSSBOG00000023844)	TOX (ENSSBOG00000033601)	NSMAF (ENSSBOG00000025474)	SDCBP (ENSSBOG00000023954)	CYP7A1 (ENSSBOG00000021502)	UBXN2B (ENSSBOG00000026177)	ENSSBOG00000020724	BPNT2 (ENSSBOG00000021056)	ENSSBOG00000023239	PENK (ENSSBOG00000027180)
Capuchin	MODERN SPECIES	373												YTHDF3 (ENSCCAG00000022316)	ENSCCAG00000034419	ENSCCAG00000023962	GGH (ENSCCAG00000026314)	ENSCCAG00000037927 ##22	ENSCCAG00000027663
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.b ##22
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000154661.b	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a.m.a
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00940000154661.b	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00940000161632.c	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000163054	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00940000154911.v	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611
Gibbon	MODERN SPECIES	449	DRP2 (ENSNLEG00000007531)	ENSNLEG00000034011	CENPI (ENSNLEG00000007527)	TMEM35A (ENSNLEG00000007526)	TRMT2B (ENSNLEG00000007522)	ARL13A (ENSNLEG00000007519)	XKRX (ENSNLEG00000007521)	ENSNLEG00000034385	NOX1 (ENSNLEG00000007516)	CSTF2 (ENSNLEG00000007510)	SYTL4 (ENSNLEG00000007507)	SRPX2 (ENSNLEG00000007506)	TSPAN6 (ENSNLEG00000007505)	TNMD (ENSNLEG00000007504)	PCDH19 (ENSNLEG00000007503)	ENSNLEG00000013567 ##22	ENSNLEG00000030185	DIAPH2 (ENSNLEG00000000884)	ENSNLEG00000019052	FAM133A (ENSNLEG00000019038)	NAP1L3 (ENSNLEG00000000881)	ENSNLEG00000034978	ENSNLEG00000029399	ENSNLEG00000029321	PABPC5 (ENSNLEG00000035086)	ENSNLEG00000036286	ENSNLEG00000035924	ENSNLEG00000027997	CPXCR1 (ENSNLEG00000002894)	KLHL4 (ENSNLEG00000002824)	ENSNLEG00000002822
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000154661.b	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f.b	ENSGT00940000161632.c	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000163054	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000154977.l.b	ENSGT00940000163848.c	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00940000154911.v	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611
Orangutan	MODERN SPECIES	242	TIMM8A (ENSPPYG00000030483)	ENSPPYG00000020550	DRP2 (ENSPPYG00000020549)	CENPI (ENSPPYG00000020547)	TMEM35A (ENSPPYG00000036418)	TRMT2B (ENSPPYG00000020545)	ARL13A (ENSPPYG00000020544)	XKRX (ENSPPYG00000020543)	NOX1 (ENSPPYG00000020542)	CSTF2 (ENSPPYG00000020541)	SYTL4 (ENSPPYG00000020540)	SRPX2 (ENSPPYG00000020539)	TSPAN6 (ENSPPYG00000020538)	TNMD (ENSPPYG00000020537)	PCDH19 (ENSPPYG00000020536)	ENSPPYG00000041050 ##22	DIAPH2 (ENSPPYG00000020532)	NAP1L3 (ENSPPYG00000020530)	ENSPPYG00000035760	ENSPPYG00000020527	PABPC5 (ENSPPYG00000020526)	TGIF2LX (ENSPPYG00000020525)	KLHL4 (ENSPPYG00000020523)	DACH2 (ENSPPYG00000020521)	CHM (ENSPPYG00000020520)	POF1B (ENSPPYG00000020519)	ZNF711 (ENSPPYG00000020518)	SATL1 (ENSPPYG00000020517)	APOOL (ENSPPYG00000020516)	HDX (ENSPPYG00000020514)	RPS6KA6 (ENSPPYG00000020513)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000153467.a.b	ENSGT00390000013235.c	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f.b	ENSGT00390000018706.m.b.b.l.b	ENSGT00950000183123.h.b	ENSGT00940000161632.c	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000163054	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335.c	ENSGT00940000162668	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b.a	ENSGT00940000163848.c	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00940000154911.v	ENSGT00950000182994.A.n.a	ENSGT00390000000141
Gorilla	MODERN SPECIES	523	ENSGGOG00000043409	CENPI (ENSGGOG00000012614)	TMEM35A (ENSGGOG00000027304)	TRMT2B (ENSGGOG00000023759)	ARL13A (ENSGGOG00000009336)	XKRX (ENSGGOG00000001349)	ENSGGOG00000022588	ENSGGOG00000027879	NOX1 (ENSGGOG00000006886)	CSTF2 (ENSGGOG00000022267)	SYTL4 (ENSGGOG00000001159)	SRPX2 (ENSGGOG00000010009)	TSPAN6 (ENSGGOG00000010003)	TNMD (ENSGGOG00000017007)	PCDH19 (ENSGGOG00000001810)	ENSGGOG00000027167 ##22	ENSGGOG00000038151	DIAPH2 (ENSGGOG00000002859)	ENSGGOG00000038270	FAM133A (ENSGGOG00000043974)	NAP1L3 (ENSGGOG00000016989)	ENSGGOG00000025902	ENSGGOG00000039790	ENSGGOG00000025897	ENSGGOG00000042618	ENSGGOG00000008584	PABPC5 (ENSGGOG00000007622)	ENSGGOG00000037634	ENSGGOG00000036979	CPXCR1 (ENSGGOG00000026865)	RPSA (ENSGGOG00000036643)
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000153467.a.b	ENSGT00390000013235.c	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f.b	ENSGT00390000018706.m.b.b.l.b	ENSGT00950000183123.h.b	ENSGT00940000161632.c	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000163054	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335.c	ENSGT00940000162668	ENSGT00940000154977.l.b.b	ENSGT00940000165485	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b.a	ENSGT00940000163848.c	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00940000154911.v
Pan	ANCESTRAL SPECIES	6	ENSGT00940000153467.a.b	ENSGT00390000013235.c	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f.b	ENSGT00390000018706.m.b.b.l.b	ENSGT00950000183123.h.b	ENSGT00940000161632.c	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000163054	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000155206.d.b	ENSGT00940000153889.e.a.a	ENSGT00950000182869.e.a.b.sb.b.a.a.b.b	ENSGT00940000158335.c	ENSGT00940000162668	ENSGT00940000154977.l.b.b	ENSGT00940000165485	ENSGT00390000003732	ENSGT00950000183119.a.e.a.d.a.a	ENSGT00940000159818	ENSGT00390000001134.b
Bonobo	MODERN SPECIES	369	ENSPPAG00000001178	CENPI (ENSPPAG00000035823)	TMEM35A (ENSPPAG00000042769)	TRMT2B (ENSPPAG00000038826)	ARL13A (ENSPPAG00000028709)	XKRX (ENSPPAG00000030677)	ENSPPAG00000031058	ENSPPAG00000027791	NOX1 (ENSPPAG00000021977)	CSTF2 (ENSPPAG00000031804)	SYTL4 (ENSPPAG00000026955)	SRPX2 (ENSPPAG00000039226)	TSPAN6 (ENSPPAG00000038316)	TNMD (ENSPPAG00000035804)	PCDH19 (ENSPPAG00000039228)	ENSPPAG00000034644 ##22	DIAPH2 (ENSPPAG00000040909)	ENSPPAG00000038822	FAM133A (ENSPPAG00000017635)	NAP1L3 (ENSPPAG00000019923)	ENSPPAG00000007354	ENSPPAG00000003031	ENSPPAG00000040878	ENSPPAG00000030962	ENSPPAG00000043443	PABPC5 (ENSPPAG00000007378)	ENSPPAG00000041507	ENSPPAG00000038346	CPXCR1 (ENSPPAG00000016441)	ENSPPAG00000026574	KLHL4 (ENSPPAG00000043431)
Chimpanzee	MODERN SPECIES	972	ENSPTRG00000044069	CENPI (ENSPTRG00000022098)	TMEM35A (ENSPTRG00000022097)	TRMT2B (ENSPTRG00000023413)	ARL13A (ENSPTRG00000022094)	XKRX (ENSPTRG00000022093)	ENSPTRG00000050488	ENSPTRG00000052173	NOX1 (ENSPTRG00000048908)	CSTF2 (ENSPTRG00000022090)	SYTL4 (ENSPTRG00000022089)	SRPX2 (ENSPTRG00000022088)	TSPAN6 (ENSPTRG00000022087)	TNMD (ENSPTRG00000022086)	PCDH19 (ENSPTRG00000022085)	ENSPTRG00000043192 ##22	DIAPH2 (ENSPTRG00000022082)	ENSPTRG00000048048	ENSPTRG00000033789	FAM133A (ENSPTRG00000044529)	NAP1L3 (ENSPTRG00000022080)	ENSPTRG00000043794	ENSPTRG00000043870	ENSPTRG00000022079	PABPC5 (ENSPTRG00000022078)	ENSPTRG00000045302	ENSPTRG00000044589	CPXCR1 (ENSPTRG00000022076)	ENSPTRG00000049218	KLHL4 (ENSPTRG00000022075)	DACH2 (ENSPTRG00000022073)
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00390000018706.m.b.b.l.b	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611	ENSGT00950000183121.b.b.b.a
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00390000018706.m.b.b.l.b	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611	ENSGT00950000183121.b.b.b.a
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00390000018706.m.b.b.l.b	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00940000155683.l.a	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00940000165485	ENSGT00390000003732	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611	ENSGT00950000183121.b.b.b.a
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00390000018706.m.b.b.l.b	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00530000063516.a.a.c.b.y.a.c	ENSGT00910000146851.a	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000162668	ENSGT00940000153284.a.h.i.b	ENSGT00940000154977.l.b	ENSGT00940000163848	ENSGT00940000165485	ENSGT00940000164980.c.a	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000158469	ENSGT00940000154661.b	ENSGT00940000161565	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00530000063723.b	ENSGT00940000161284	ENSGT00390000003231.a.f	ENSGT00940000161632	ENSGT00940000158987	ENSGT00940000159060	ENSGT00940000159092	ENSGT00480000042679.a	ENSGT00940000159162	ENSGT00940000153239.B.i.a.b ##22	ENSGT00940000157822	ENSGT00910000146851.a	ENSGT00730000111097.e	ENSGT00940000162927	ENSGT00940000158335	ENSGT00940000163848	ENSGT01100000263543.a.g.b.b.b.b.c.a.b.b	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A.n.a	ENSGT00390000000141	ENSGT00940000159611	ENSGT00950000183123.g.a.b.b.s.a	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a.m.a.b
Rhesus	MODERN SPECIES	327	BTK (ENSMMUG00000019573)	TIMM8A (ENSMMUG00000052483)	TAF7L (ENSMMUG00000021581)	DRP2 (ENSMMUG00000021579)	CENPI (ENSMMUG00000007601)	TMEM35A (ENSMMUG00000065018)	TRMT2B (ENSMMUG00000010394)	ARL13A (ENSMMUG00000019971)	XKRX (ENSMMUG00000045191)	NOX1 (ENSMMUG00000004178)	CSTF2 (ENSMMUG00000013008)	SRPX2 (ENSMMUG00000008210)	TSPAN6 (ENSMMUG00000008209)	TNMD (ENSMMUG00000008212)	PCDH19 (ENSMMUG00000011078)	ENSMMUG00000000448 ##22	DIAPH2 (ENSMMUG00000020862)	ENSMMUG00000062471	ENSMMUG00000062616	ENSMMUG00000051872	FAM133A (ENSMMUG00000000379)	NAP1L3 (ENSMMUG00000012702)	ENSMMUG00000019594	ENSMMUG00000012777	ENSMMUG00000065111	TGIF2LX (ENSMMUG00000009258)	ENSMMUG00000055147	KLHL4 (ENSMMUG00000019383)	ENSMMUG00000052264	DACH2 (ENSMMUG00000016777)	ENSMMUG00000045262
Crab-eating macaque	MODERN SPECIES	175	BTK (ENSMFAG00000043126)	TIMM8A (ENSMFAG00000000557)	TAF7L (ENSMFAG00000046005)	DRP2 (ENSMFAG00000001071)	CENPI (ENSMFAG00000004043)	TMEM35A (ENSMFAG00000044929)	TRMT2B (ENSMFAG00000045550)	ARL13A (ENSMFAG00000043660)	XKRX (ENSMFAG00000001920)	NOX1 (ENSMFAG00000043343)	CSTF2 (ENSMFAG00000043888)	SYTL4 (ENSMFAG00000033002)	TSPAN6 (ENSMFAG00000038827)	TNMD (ENSMFAG00000002133)	PCDH19 (ENSMFAG00000033159)	ENSMFAG00000001699 ##22	ENSMFAG00000064992	ENSMFAG00000053412	ENSMFAG00000050041	ENSMFAG00000059796	ENSMFAG00000056310	ENSMFAG00000051961	ENSMFAG00000044794	ENSMFAG00000018867	ENSMFAG00000054239	ENSMFAG00000062456	ENSMFAG00000058695	ENSMFAG00000049512	ENSMFAG00000003643	ENSMFAG00000050987	ENSMFAG00000030696
Pig-tailed macaque	MODERN SPECIES	282	ENSMNEG00000035989	ENSMNEG00000034104	CENPI (ENSMNEG00000005531)	TMEM35A (ENSMNEG00000034536)	TRMT2B (ENSMNEG00000045257)	ARL13A (ENSMNEG00000026016)	XKRX (ENSMNEG00000041665)	ENSMNEG00000038356	NOX1 (ENSMNEG00000002185)	CSTF2 (ENSMNEG00000041824)	SYTL4 (ENSMNEG00000038314)	SRPX2 (ENSMNEG00000008534)	TSPAN6 (ENSMNEG00000044238)	TNMD (ENSMNEG00000030016)	PCDH19 (ENSMNEG00000037156)	ENSMNEG00000037685 ##22
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.a.b ##22
Golden snub-nosed monkey	MODERN SPECIES	3009																ENSRROG00000008970 ##22
Black snub-nosed monkey	MODERN SPECIES	1418																ENSRBIG00000044021 ##22
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.b ##22
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00940000162913	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00960000192423	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896	ENSGT00680000100037.g.a.b.b
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00940000163209.b	ENSGT00940000162913	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000154703.e.b.b	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896	ENSGT00680000100037.g.a.b.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00940000163209.b	ENSGT00940000162913	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000154703.e.b.b	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00940000162913	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000154703.e.b.b	ENSGT00580000082495.a.b	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921	ENSGT00940000155780	ENSGT00910000147522	ENSGT00390000009948.c	ENSGT00390000000566.r	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00940000162913	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000154703.e.b.b	ENSGT00580000082495.a.b	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921	ENSGT00940000155780	ENSGT00910000147522	ENSGT00390000009948.c	ENSGT00390000000566.r	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B
Pan	ANCESTRAL SPECIES	16	ENSGT00940000163209.b	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000154703.e.b.b	ENSGT00580000082495.a.b	ENSGT00940000153249.a	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00390000001804.cb.b.c.b	ENSGT00940000155921	ENSGT00940000155780	ENSGT00910000147522	ENSGT00390000009948.c	ENSGT00390000000566.r	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B
Chimpanzee	MODERN SPECIES	1	TBC1D12 (ENSPTRG00000002777)	NOC3L (ENSPTRG00000002776)	PLCE1 (ENSPTRG00000002775)	ENSPTRG00000045483	PIPSL (ENSPTRG00000046503)	SLC35G1 (ENSPTRG00000002772)	ENSPTRG00000047673	LGI1 (ENSPTRG00000002771)	FRA10AC1 (ENSPTRG00000002770)	PDE6C (ENSPTRG00000002769)	RBP4 (ENSPTRG00000002768)	FFAR4 (ENSPTRG00000002767)	CEP55 (ENSPTRG00000002766)	MYOF (ENSPTRG00000002765)	ENSPTRG00000052387	ENSPTRG00000047997 ##22	CYP26A1 (ENSPTRG00000002763)	CYP26C1 (ENSPTRG00000002762)	EXOC6 (ENSPTRG00000002761)	HHEX (ENSPTRG00000002760)	ENSPTRG00000042999	KIF11 (ENSPTRG00000002758)	IDE (ENSPTRG00000002757)	ENSPTRG00000049256	MARCHF5 (ENSPTRG00000024274)	ENSPTRG00000042284	CPEB3 (ENSPTRG00000002753)	BTAF1 (ENSPTRG00000002751)	FGFBP3 (ENSPTRG00000002750)	TNKS2 (ENSPTRG00000002749)	PPP1R3C (ENSPTRG00000041574)
Bonobo	MODERN SPECIES	1	HELLS (ENSPPAG00000001726)	TBC1D12 (ENSPPAG00000031966)	NOC3L (ENSPPAG00000043755)	PLCE1 (ENSPPAG00000033051)	ENSPPAG00000026684	ENSPPAG00000041375	SLC35G1 (ENSPPAG00000030552)	ENSPPAG00000027315	LGI1 (ENSPPAG00000035614)	FRA10AC1 (ENSPPAG00000038889)	PDE6C (ENSPPAG00000026870)	RBP4 (ENSPPAG00000041588)	FFAR4 (ENSPPAG00000013271)	CEP55 (ENSPPAG00000040332)	MYOF (ENSPPAG00000040575)	ENSPPAG00000029158 ##22	CYP26A1 (ENSPPAG00000033856)	CYP26C1 (ENSPPAG00000036382)	EXOC6 (ENSPPAG00000026890)	HHEX (ENSPPAG00000036114)	ENSPPAG00000033361	KIF11 (ENSPPAG00000043128)	IDE (ENSPPAG00000044069)	ENSPPAG00000043024	MARCHF5 (ENSPPAG00000042800)	ENSPPAG00000028771	ENSPPAG00000027329	CPEB3 (ENSPPAG00000031528)	BTAF1 (ENSPPAG00000043906)	ENSPPAG00000036014	TNKS2 (ENSPPAG00000040339)
Gorilla	MODERN SPECIES	1	ENSGGOG00000026937	NOC3L (ENSGGOG00000014038)	PLCE1 (ENSGGOG00000007807)	ENSGGOG00000004954	ENSGGOG00000039423	SLC35G1 (ENSGGOG00000025811)	ENSGGOG00000042755	ENSGGOG00000040835	LGI1 (ENSGGOG00000002245)	FRA10AC1 (ENSGGOG00000010770)	PDE6C (ENSGGOG00000004416)	RBP4 (ENSGGOG00000008167)	FFAR4 (ENSGGOG00000004413)	CEP55 (ENSGGOG00000003954)	MYOF (ENSGGOG00000006659)	ENSGGOG00000040568 ##22	CYP26A1 (ENSGGOG00000009114)	CYP26C1 (ENSGGOG00000009105)	EXOC6 (ENSGGOG00000027393)	ENSGGOG00000039693	ENSGGOG00000024168	ENSGGOG00000039016	KIF11 (ENSGGOG00000011847)	IDE (ENSGGOG00000010776)	ENSGGOG00000036985	MARCHF5 (ENSGGOG00000009767)	ENSGGOG00000039357	CPEB3 (ENSGGOG00000016441)	BTAF1 (ENSGGOG00000007216)	TNKS2 (ENSGGOG00000009781)	PPP1R3C (ENSGGOG00000008830)
Gibbon	MODERN SPECIES	18	CYP2C19 (ENSNLEG00000013002)	HELLS (ENSNLEG00000012987)	TBC1D12 (ENSNLEG00000012968)	NOC3L (ENSNLEG00000012959)	PLCE1 (ENSNLEG00000012910)	ENSNLEG00000032681	SLC35G1 (ENSNLEG00000029824)	ENSNLEG00000034751	LGI1 (ENSNLEG00000012889)	FRA10AC1 (ENSNLEG00000012877)	PDE6C (ENSNLEG00000012855)	ENSNLEG00000012845	RBP4 (ENSNLEG00000012849)	CEP55 (ENSNLEG00000032627)	MYOF (ENSNLEG00000012741)	ENSNLEG00000034323 ##22	CYP26A1 (ENSNLEG00000012727)	CYP26C1 (ENSNLEG00000012723)	EXOC6 (ENSNLEG00000012713)	ENSNLEG00000012707	KIF11 (ENSNLEG00000012674)	IDE (ENSNLEG00000012631)	MARCHF5 (ENSNLEG00000012617)	CPEB3 (ENSNLEG00000012600)	ENSNLEG00000035780	BTAF1 (ENSNLEG00000012513)	TNKS2 (ENSNLEG00000012457)	PPP1R3C (ENSNLEG00000012453)	HECTD2 (ENSNLEG00000012415)	PCGF5 (ENSNLEG00000033917)	ENSNLEG00000034294
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000162913	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00960000192423	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896	ENSGT00680000100037.g.a.b.b
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000162913	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00960000192423	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896	ENSGT00680000100037.g.a.b.b
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000163209.a.a.a	ENSGT00940000162913.f	ENSGT00740000115593	ENSGT00940000156410	ENSGT00390000008540	ENSGT00940000157356	ENSGT00940000153249.a	ENSGT00960000192423	ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000153889.e.a.a.f.a	ENSGT00390000000566.q.a	ENSGT00940000157500	ENSGT00940000154372.b	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.b ##22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.b ##22
Sooty mangabey	MODERN SPECIES	115	CYP2C19 (ENSCATG00000035772)	HELLS (ENSCATG00000033830)	TBC1D12 (ENSCATG00000040590)	ENSCATG00000040576	NOC3L (ENSCATG00000035635)	PLCE1 (ENSCATG00000032075)	SLC35G1 (ENSCATG00000032972)	ENSCATG00000036621	LGI1 (ENSCATG00000032789)	FRA10AC1 (ENSCATG00000038055)	PDE6C (ENSCATG00000029819)	FFAR4 (ENSCATG00000033579)	RBP4 (ENSCATG00000036680)	CEP55 (ENSCATG00000028663)	MYOF (ENSCATG00000041418)	ENSCATG00000033716 ##22	CYP26C1 (ENSCATG00000039097)	EXOC6 (ENSCATG00000035172)	ENSCATG00000022006	HHEX (ENSCATG00000042941)	KIF11 (ENSCATG00000040149)	IDE (ENSCATG00000039886)	ENSCATG00000039239	MARCHF5 (ENSCATG00000013785)	CPEB3 (ENSCATG00000038447)	ENSCATG00000034470	ENSCATG00000021700	BTAF1 (ENSCATG00000043731)	TNKS2 (ENSCATG00000035054)	PPP1R3C (ENSCATG00000040666)	HECTD2 (ENSCATG00000035693)
Macaca	ANCESTRAL SPECIES																	ENSGT00940000153239.B.i.b ##22
Pig-tailed macaque	MODERN SPECIES	104	HELLS (ENSMNEG00000042628)	TBC1D12 (ENSMNEG00000042246)	ENSMNEG00000021980	NOC3L (ENSMNEG00000027484)	PLCE1 (ENSMNEG00000030694)	SLC35G1 (ENSMNEG00000043665)	ENSMNEG00000033144	LGI1 (ENSMNEG00000036411)	FRA10AC1 (ENSMNEG00000040322)	PDE6C (ENSMNEG00000040848)	FFAR4 (ENSMNEG00000031922)	RBP4 (ENSMNEG00000031052)	CEP55 (ENSMNEG00000032641)	MYOF (ENSMNEG00000013341)	ENSMNEG00000044241	ENSMNEG00000030366 ##22	CYP26A1 (ENSMNEG00000028946)	CYP26C1 (ENSMNEG00000045176)	EXOC6 (ENSMNEG00000043219)	HHEX (ENSMNEG00000037100)	KIF11 (ENSMNEG00000020591)	ENSMNEG00000028830	IDE (ENSMNEG00000033204)	MARCHF5 (ENSMNEG00000037845)	CPEB3 (ENSMNEG00000045465)	ENSMNEG00000030284	ENSMNEG00000033162	BTAF1 (ENSMNEG00000035134)	TNKS2 (ENSMNEG00000036136)	ENSMNEG00000029218	PPP1R3C (ENSMNEG00000040446)
Rhinopithecus	ANCESTRAL SPECIES	94									ENSGT00940000159793	ENSGT00390000017833	ENSGT00940000157825	ENSGT00510000047107.A	ENSGT01070000253744.a.a.a.a	ENSGT00510000047961	ENSGT00940000154741	ENSGT00940000153239.B.i.b ##22	ENSGT00800000124060.B	ENSGT00800000124060.A.b	ENSGT00390000005739.a.b	ENSGT00940000161748	ENSGT00390000001804.cb.a.a	ENSGT00390000018390.ic.a	ENSGT00940000155921	ENSGT00940000155780	ENSGT00390000009948.c	ENSGT00940000158949	ENSGT00940000157500	ENSGT00940000159911	ENSGT00940000155648.B	ENSGT00940000157750	ENSGT00940000155896
Black snub-nosed monkey	MODERN SPECIES	552									LGI1 (ENSRBIG00000032129)	FRA10AC1 (ENSRBIG00000043714)	PDE6C (ENSRBIG00000044132)	RBP4 (ENSRBIG00000032922)	FFAR4 (ENSRBIG00000035742)	CEP55 (ENSRBIG00000037996)	MYOF (ENSRBIG00000030592)	ENSRBIG00000041992 ##22	CYP26A1 (ENSRBIG00000018358)	CYP26C1 (ENSRBIG00000036390)	EXOC6 (ENSRBIG00000040201)	HHEX (ENSRBIG00000040104)	ENSRBIG00000044133	ENSRBIG00000044872	KIF11 (ENSRBIG00000037663)	IDE (ENSRBIG00000035939)	GFRA2 (ENSRBIG00000027937)	ENSRBIG00000035516	LZTS1 (ENSRBIG00000034404)	ATP6V1B2 (ENSRBIG00000043092)	SLC18A1 (ENSRBIG00000030755)
Tarsier	MODERN SPECIES	3308															DESI1 (ENSTSYG00000027841) #21	XRCC6 (ENSTSYG00000011348) #22
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.w	ENSGT00940000153331
Mouse lemur	MODERN SPECIES	29	ENSMICG00000041690	RBX1 (ENSMICG00000034593)	EP300 (ENSMICG00000013864)	L3MBTL2 (ENSMICG00000002619) #10	CHADL (ENSMICG00000037353) #11	RANGAP1 (ENSMICG00000013450) #13	ZC3H7B (ENSMICG00000013471) #14	ENSMICG00000045077 #15	TOB2 (ENSMICG00000044468)	PHF5A (ENSMICG00000013520) #16	ACO2 (ENSMICG00000013529) #17	POLR3H (ENSMICG00000013546) #18	CSDC2 (ENSMICG00000041795) #19	PMM1 (ENSMICG00000005983) #20	DESI1 (ENSMICG00000045578) #21	XRCC6 (ENSMICG00000005993) #22	ENSMICG00000007014	SNU13 (ENSMICG00000013557) #23	ENSMICG00000045689	MEI1 (ENSMICG00000000892) #24	ENSMICG00000030643	CCDC134 (ENSMICG00000000910) #25	SREBF2 (ENSMICG00000000913) #27	SHISA8 (ENSMICG00000042512) #28	TNFRSF13C (ENSMICG00000027267) #29	CENPM (ENSMICG00000032243) #31	SMIM45 (ENSMICG00000035029) #32	ENSMICG00000003589 #34	WBP2NL (ENSMICG00000047786) #35	ENSMICG00000033559	NAGA (ENSMICG00000012620) #36
Lemuriformes_a	ANCESTRAL SPECIES	38	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898.w	ENSGT00940000153331
Coquerels sifaka	MODERN SPECIES	131	ENSPCOG00000024193	ENSPCOG00000024901	RBX1 (ENSPCOG00000016863)	EP300 (ENSPCOG00000021644)	L3MBTL2 (ENSPCOG00000024552) #10	CHADL (ENSPCOG00000028654) #11	RANGAP1 (ENSPCOG00000028740) #13	ZC3H7B (ENSPCOG00000024031) #14	TEF (ENSPCOG00000013129) #15	PHF5A (ENSPCOG00000014332) #16	ACO2 (ENSPCOG00000017488) #17	POLR3H (ENSPCOG00000013751) #18	CSDC2 (ENSPCOG00000024484) #19	ENSPCOG00000020073 #20	DESI1 (ENSPCOG00000026824) #21	XRCC6 (ENSPCOG00000027338) #22	ENSPCOG00000025033 #23	MEI1 (ENSPCOG00000015175) #24	CCDC134 (ENSPCOG00000025774) #25	SREBF2 (ENSPCOG00000023461) #27	SHISA8 (ENSPCOG00000026922) #28	TNFRSF13C (ENSPCOG00000025422) #29	CENPM (ENSPCOG00000014847) #31	SMIM45 (ENSPCOG00000003245) #32	ENSPCOG00000024794 #34	ENSPCOG00000012300 #35	NAGA (ENSPCOG00000028087) #36	SMDT1 (ENSPCOG00000028742)	ENSPCOG00000028700	ENSPCOG00000028795	TCF20 (ENSPCOG00000022152)
Greater bamboo lemur	MODERN SPECIES	231	XPNPEP3 (ENSPSMG00000002127)	RBX1 (ENSPSMG00000002112)	EP300 (ENSPSMG00000001992)	L3MBTL2 (ENSPSMG00000001837) #10	CHADL (ENSPSMG00000001766) #11	RANGAP1 (ENSPSMG00000001639) #13	ZC3H7B (ENSPSMG00000001526) #14	TEF (ENSPSMG00000001506) #15	TOB2 (ENSPSMG00000001464)	PHF5A (ENSPSMG00000001452) #16	ACO2 (ENSPSMG00000001419) #17	POLR3H (ENSPSMG00000001287) #18	CSDC2 (ENSPSMG00000001223) #19	PMM1 (ENSPSMG00000001200) #20	DESI1 (ENSPSMG00000001171) #21	XRCC6 (ENSPSMG00000000818) #22	SNU13 (ENSPSMG00000000630) #23	MEI1 (ENSPSMG00000000596) #24	CCDC134 (ENSPSMG00000000532) #25	SREBF2 (ENSPSMG00000000460) #27	SHISA8 (ENSPSMG00000000361) #28	TNFRSF13C (ENSPSMG00000000354) #29	CENPM (ENSPSMG00000000339) #31	SMIM45 (ENSPSMG00000000287) #32	SEPTIN3 (ENSPSMG00000000252) #34	WBP2NL (ENSPSMG00000000073) #35	NAGA (ENSPSMG00000000056) #36	PHETA2 (ENSPSMG00000000031)	SMDT1 (ENSPSMG00000025869)	NDUFA6 (ENSPSMG00000025868)	ENSPSMG00000025867
Bushbaby	MODERN SPECIES	122	XPNPEP3 (ENSOGAG00000030566)	RBX1 (ENSOGAG00000016937)	EP300 (ENSOGAG00000000423)	L3MBTL2 (ENSOGAG00000000428) #10	CHADL (ENSOGAG00000028902) #11	RANGAP1 (ENSOGAG00000008823) #13	ZC3H7B (ENSOGAG00000008827) #14	TEF (ENSOGAG00000025997) #15	TOB2 (ENSOGAG00000008831)	ENSOGAG00000002839 #16	ACO2 (ENSOGAG00000002845) #17	ENSOGAG00000002850 #18	CSDC2 (ENSOGAG00000002852) #19	PMM1 (ENSOGAG00000027466) #20	DESI1 (ENSOGAG00000002854) #21	XRCC6 (ENSOGAG00000008821) #22	SNU13 (ENSOGAG00000004007) #23	ENSOGAG00000026014	MEI1 (ENSOGAG00000011980) #24	CCDC134 (ENSOGAG00000011990) #25	SREBF2 (ENSOGAG00000014736) #27	ENSOGAG00000025319 #28	TNFRSF13C (ENSOGAG00000028346) #29	CENPM (ENSOGAG00000014744) #31	ENSOGAG00000014752 #34	NAGA (ENSOGAG00000016281) #36	PHETA2 (ENSOGAG00000025089)	SMDT1 (ENSOGAG00000014760)	NDUFA6 (ENSOGAG00000014762)	CYP2D6 (ENSOGAG00000004761)	TCF20 (ENSOGAG00000034778)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00550000074840.y.b.a.a ##23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Tree shrew	MODERN SPECIES	3471								TEF (ENSTBEG00000010576) #15	TOB2 (ENSTBEG00000010846)	PHF5A (ENSTBEG00000010945) #16	ACO2 (ENSTBEG00000011060) #17	POLR3H (ENSTBEG00000011425) #18	CSDC2 (ENSTBEG00000011596) #19	PMM1 (ENSTBEG00000011635) #20	DESI1 (ENSTBEG00000011660) #21	XRCC6 (ENSTBEG00000011736) #22
Glires	ANCESTRAL SPECIES	4	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00940000153331.y.b.a.b	ENSGT00390000003022.t	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Golden Hamster	MODERN SPECIES	626	ENSMAUG00000004356	Dnajb7 (ENSMAUG00000010726)	ENSMAUG00000010852	Ep300 (ENSMAUG00000004380)	L3mbtl2 (ENSMAUG00000008519) #10	Rangap1 (ENSMAUG00000013685) #13	Zc3h7b (ENSMAUG00000007915) #14	Tef (ENSMAUG00000011211) #15	Tob2 (ENSMAUG00000007650)	Phf5a (ENSMAUG00000017124) #16	Aco2 (ENSMAUG00000007598) #17	Polr3h (ENSMAUG00000022215) #18	Csdc2 (ENSMAUG00000020821) #19	ENSMAUG00000012267	Desi1 (ENSMAUG00000020204) #21	Xrcc6 (ENSMAUG00000017340) #22	Snu13 (ENSMAUG00000010871) #23	4930407I10Rik (ENSMAUG00000020761)	ENSMAUG00000018190 #24	Ccdc134 (ENSMAUG00000015349) #25	Srebf2 (ENSMAUG00000014667) #27	Shisa8 (ENSMAUG00000011455) #28	Tnfrsf13c (ENSMAUG00000021132) #29	Cenpm (ENSMAUG00000013641) #31	Smim45 (ENSMAUG00000010423) #32	ENSMAUG00000014933 #34	Wbp2nl (ENSMAUG00000021409) #35	ENSMAUG00000021300 #36	Pheta2 (ENSMAUG00000012084)	Smdt1 (ENSMAUG00000013006)	ENSMAUG00000016173
Chinese hamster chok1gshd	MODERN SPECIES	1	Ep300 (ENSCGRG00001020720)	L3mbtl2 (ENSCGRG00001021097) #10	Chadl (ENSCGRG00001017198) #11	Rangap1 (ENSCGRG00001017379) #13	Zc3h7b (ENSCGRG00001022924) #14	Tef (ENSCGRG00001005588) #15	Tob2 (ENSCGRG00001010039)	Phf5a (ENSCGRG00001017936) #16	ENSCGRG00001023335 #17	Polr3h (ENSCGRG00001023556) #18	Csdc2 (ENSCGRG00001021123) #19	Pmm1 (ENSCGRG00001021685) #20	ENSCGRG00001018874	Ndufb11b (ENSCGRG00001009944)	Desi1 (ENSCGRG00001018751) #21	Xrcc6 (ENSCGRG00001019029) #22	ENSCGRG00001019169 #23	4930407I10Rik (ENSCGRG00001020277)	Mei1 (ENSCGRG00001018719) #24	Ccdc134 (ENSCGRG00001019080) #25	Srebf2 (ENSCGRG00001023422) #27	Shisa8 (ENSCGRG00001005475) #28	Tnfrsf13c (ENSCGRG00001021023) #29	Cenpm (ENSCGRG00001021402) #31	Smim45 (ENSCGRG00001017767) #32	ENSCGRG00001018092 #34	Wbp2nl (ENSCGRG00001022437) #35	Naga (ENSCGRG00001023285) #36	Pheta2 (ENSCGRG00001009774)	Smdt1 (ENSCGRG00001008476)	Ndufa6 (ENSCGRG00001021387)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.a.h ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Northern American deer mouse	MODERN SPECIES	12	Chadl (ENSPEMG00000015210) #11	Rangap1 (ENSPEMG00000013930) #13	Zc3h7b (ENSPEMG00000023990) #14	Tef (ENSPEMG00000029238) #15	Tob2 (ENSPEMG00000028595)	ENSPEMG00000027549 #16	Aco2 (ENSPEMG00000021158) #17	ENSPEMG00000000726 #18	Csdc2 (ENSPEMG00000026460) #19	Pmm1 (ENSPEMG00000015085) #20	ENSPEMG00000024816	ENSPEMG00000027260	ENSPEMG00000028310	Ndufb11b (ENSPEMG00000027521)	Desi1 (ENSPEMG00000024515) #21	Xrcc6 (ENSPEMG00000023446) #22	ENSPEMG00000018900 ##23	ENSPEMG00000027230	Mei1 (ENSPEMG00000000470) #24	Ccdc134 (ENSPEMG00000030390) #25	Srebf2 (ENSPEMG00000015944) #27	Shisa8 (ENSPEMG00000020435) #28	Tnfrsf13c (ENSPEMG00000022848) #29	Cenpm (ENSPEMG00000007770) #31	Smim45 (ENSPEMG00000014910) #32	ENSPEMG00000009916 #34	Wbp2nl (ENSPEMG00000030920) #35	Naga (ENSPEMG00000016747) #36	Pheta2 (ENSPEMG00000020356)	ENSPEMG00000020633	Ndufa6 (ENSPEMG00000014882)
Prairie vole	MODERN SPECIES	2	Slurp2 (ENSMOCG00000005277)	Ly6d (ENSMOCG00000015686)	Ly6g6g (ENSMOCG00000013524)	L3mbtl2 (ENSMOCG00000019285) #10	Chadl (ENSMOCG00000011810) #11	Rangap1 (ENSMOCG00000015758) #13	Zc3h7b (ENSMOCG00000014855) #14	Tef (ENSMOCG00000001800) #15	Tob2 (ENSMOCG00000021112)	Phf5a (ENSMOCG00000015149) #16	Aco2 (ENSMOCG00000008387) #17	Polr3h (ENSMOCG00000018747) #18	Csdc2 (ENSMOCG00000017299) #19	Pmm1 (ENSMOCG00000012876) #20	Desi1 (ENSMOCG00000010048) #21	Xrcc6 (ENSMOCG00000015717) #22	4930407I10Rik (ENSMOCG00000013993)	Mei1 (ENSMOCG00000009514) #24	Ccdc134 (ENSMOCG00000005926) #25	Srebf2 (ENSMOCG00000019045) #27	Shisa8 (ENSMOCG00000005566) #28	Tnfrsf13c (ENSMOCG00000016760) #29	Cenpm (ENSMOCG00000011942) #31	Smim45 (ENSMOCG00000007536) #32	ENSMOCG00000015408 #34	Wbp2nl (ENSMOCG00000020224) #35	Naga (ENSMOCG00000002189) #36	Pheta2 (ENSMOCG00000006143)	Smdt1 (ENSMOCG00000017726)	Ndufa6 (ENSMOCG00000014629)	Cyp2d22 (ENSMOCG00000012735)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00390000003022.t	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Mus	ANCESTRAL SPECIES	11	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00390000003022.t	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00390000003022.t	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00390000003022.t	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Mouse	MODERN SPECIES	6	Dnajb7 (ENSMUSG00000047108)	Rbx1 (ENSMUSG00000022400)	Ep300 (ENSMUSG00000055024)	L3mbtl2 (ENSMUSG00000022394) #10	Chadl (ENSMUSG00000063765) #11	Rangap1 (ENSMUSG00000022391) #13	Zc3h7b (ENSMUSG00000022390) #14	Tef (ENSMUSG00000022389) #15	Tob2 (ENSMUSG00000048546)	Phf5a (ENSMUSG00000061360) #16	Aco2 (ENSMUSG00000022477) #17	Polr3h (ENSMUSG00000022476) #18	Csdc2 (ENSMUSG00000042109) #19	Pmm1 (ENSMUSG00000022474) #20	Ndufb11b (ENSMUSG00000061633)	Xrcc6 (ENSMUSG00000022471) #22	Desi1 (ENSMUSG00000022472) #21	Snu13 (ENSMUSG00000063480) #23	4930407I10Rik (ENSMUSG00000075524)	Mei1 (ENSMUSG00000068117) #24	Ccdc134 (ENSMUSG00000068114) #25	Srebf2 (ENSMUSG00000022463) #27	Shisa8 (ENSMUSG00000096883) #28	Tnfrsf13c (ENSMUSG00000068105) #29	Cenpm (ENSMUSG00000068101) #31	Smim45 (ENSMUSG00000068099) #32	Septin3 (ENSMUSG00000022456) #34	Wbp2nl (ENSMUSG00000022455) #35	Naga (ENSMUSG00000022453) #36	Pheta2 (ENSMUSG00000049687)	Smdt1 (ENSMUSG00000022452)
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
spretus	MODERN SPECIES	6	Ep300 (MGP_SPRETEiJ_G0020952)	L3mbtl2 (MGP_SPRETEiJ_G0020953) #10	Chadl (MGP_SPRETEiJ_G0020954) #11	Rangap1 (MGP_SPRETEiJ_G0020955) #13	Zc3h7b (MGP_SPRETEiJ_G0020956) #14	Tef (MGP_SPRETEiJ_G0020957) #15	MGP_SPRETEiJ_G0020958	MGP_SPRETEiJ_G0020959	MGP_SPRETEiJ_G0020960	Tob2 (MGP_SPRETEiJ_G0020961)	Phf5a (MGP_SPRETEiJ_G0020962) #16	Aco2 (MGP_SPRETEiJ_G0020963) #17	Polr3h (MGP_SPRETEiJ_G0020964) #18	Csdc2 (MGP_SPRETEiJ_G0020965) #19	Pmm1 (MGP_SPRETEiJ_G0020966) #20	Xrcc6 (MGP_SPRETEiJ_G0020967) #22	Desi1 (MGP_SPRETEiJ_G0020968) #21	MGP_SPRETEiJ_G0020969	4930407I10Rik (MGP_SPRETEiJ_G0020970)	Mei1 (MGP_SPRETEiJ_G0020971) #24	Ccdc134 (MGP_SPRETEiJ_G0020972) #25	Srebf2 (MGP_SPRETEiJ_G0020973) #27	Shisa8 (MGP_SPRETEiJ_G0020974) #28	Tnfrsf13c (MGP_SPRETEiJ_G0020975) #29	Cenpm (MGP_SPRETEiJ_G0020976) #31	Smim45 (MGP_SPRETEiJ_G0020977) #32	MGP_SPRETEiJ_G0020978 #34	Wbp2nl (MGP_SPRETEiJ_G0020979) #35	Naga (MGP_SPRETEiJ_G0020980) #36	Pheta2 (MGP_SPRETEiJ_G0020981)	Smdt1 (MGP_SPRETEiJ_G0020982)
Steppe mouse	MODERN SPECIES	2154														Ndufb11b (ENSMSIG00000018038)	ENSMSIG00000018044 #21	Xrcc6 (ENSMSIG00000018083) #22	ENSMSIG00000018121 #23	4930407I10Rik (ENSMSIG00000018133)	Mei1 (ENSMSIG00000018146) #24	Ccdc134 (ENSMSIG00000018262) #25	Srebf2 (ENSMSIG00000018280) #27	Shisa8 (ENSMSIG00000018391) #28
Ryukyu mouse	MODERN SPECIES	6	Dnajb7 (MGP_CAROLIEiJ_G0020052)	Rbx1 (MGP_CAROLIEiJ_G0020053)	Ep300 (MGP_CAROLIEiJ_G0020054)	L3mbtl2 (MGP_CAROLIEiJ_G0020055) #10	Chadl (MGP_CAROLIEiJ_G0020056) #11	Rangap1 (MGP_CAROLIEiJ_G0020057) #13	Zc3h7b (MGP_CAROLIEiJ_G0020058) #14	Tef (MGP_CAROLIEiJ_G0020059) #15	Tob2 (MGP_CAROLIEiJ_G0020060)	Phf5a (MGP_CAROLIEiJ_G0020061) #16	Aco2 (MGP_CAROLIEiJ_G0020062) #17	Polr3h (MGP_CAROLIEiJ_G0020063) #18	Csdc2 (MGP_CAROLIEiJ_G0020064) #19	Pmm1 (MGP_CAROLIEiJ_G0020065) #20	Ndufb11b (MGP_CAROLIEiJ_G0020066)	Xrcc6 (MGP_CAROLIEiJ_G0020067) #22	Desi1 (MGP_CAROLIEiJ_G0020068) #21	Snu13 (MGP_CAROLIEiJ_G0020069) #23	4930407I10Rik (MGP_CAROLIEiJ_G0020070)	Mei1 (MGP_CAROLIEiJ_G0020071) #24	Ccdc134 (MGP_CAROLIEiJ_G0020072) #25	Srebf2 (MGP_CAROLIEiJ_G0020073) #27	Shisa8 (MGP_CAROLIEiJ_G0020074) #28	Tnfrsf13c (MGP_CAROLIEiJ_G0020075) #29	Cenpm (MGP_CAROLIEiJ_G0020076) #31	Smim45 (MGP_CAROLIEiJ_G0020077) #32	MGP_CAROLIEiJ_G0020078 #34	Wbp2nl (MGP_CAROLIEiJ_G0020079) #35	Naga (MGP_CAROLIEiJ_G0020080) #36	Pheta2 (MGP_CAROLIEiJ_G0020081)	Smdt1 (MGP_CAROLIEiJ_G0020082)
Shrew mouse	MODERN SPECIES	8	Dnajb7 (MGP_PahariEiJ_G0020054)	Rbx1 (MGP_PahariEiJ_G0020055)	Ep300 (MGP_PahariEiJ_G0020056)	L3mbtl2 (MGP_PahariEiJ_G0020057) #10	Chadl (MGP_PahariEiJ_G0020058) #11	Rangap1 (MGP_PahariEiJ_G0020059) #13	Zc3h7b (MGP_PahariEiJ_G0020060) #14	Tef (MGP_PahariEiJ_G0020061) #15	Tob2 (MGP_PahariEiJ_G0020062)	Phf5a (MGP_PahariEiJ_G0020063) #16	Aco2 (MGP_PahariEiJ_G0020064) #17	Polr3h (MGP_PahariEiJ_G0020065) #18	Csdc2 (MGP_PahariEiJ_G0020066) #19	Pmm1 (MGP_PahariEiJ_G0020067) #20	Ndufb11b (MGP_PahariEiJ_G0020068)	Xrcc6 (MGP_PahariEiJ_G0020069) #22	Desi1 (MGP_PahariEiJ_G0020070) #21	MGP_PahariEiJ_G0020071	4930407I10Rik (MGP_PahariEiJ_G0020072)	Mei1 (MGP_PahariEiJ_G0020073) #24	Ccdc134 (MGP_PahariEiJ_G0020074) #25	Srebf2 (MGP_PahariEiJ_G0020075) #27	Shisa8 (MGP_PahariEiJ_G0020076) #28	MGP_PahariEiJ_G0020077 #29	Cenpm (MGP_PahariEiJ_G0020078) #31	Smim45 (MGP_PahariEiJ_G0020079) #32	MGP_PahariEiJ_G0020080 #34	Wbp2nl (MGP_PahariEiJ_G0020081) #35	Naga (MGP_PahariEiJ_G0020082) #36	Pheta2 (MGP_PahariEiJ_G0020083)	Smdt1 (MGP_PahariEiJ_G0020084)
Rat	MODERN SPECIES	17	Ep300 (ENSRNOG00000000190)	Ep300 (ENSRNOG00000065659)	L3mbtl2 (ENSRNOG00000024743) #10	Chadl (ENSRNOG00000024631) #11	Rangap1 (ENSRNOG00000031789) #13	Zc3h7b (ENSRNOG00000055925) #14	Tef (ENSRNOG00000019383) #15	Tob2 (ENSRNOG00000050500)	Phf5a (ENSRNOG00000024170) #16	Aco2 (ENSRNOG00000024128) #17	Polr3h (ENSRNOG00000004471) #18	Csdc2 (ENSRNOG00000005332) #19	Pmm1 (ENSRNOG00000005358) #20	RGD1306782 (ENSRNOG00000005572)	Desi1 (ENSRNOG00000005577) #21	Xrcc6 (ENSRNOG00000006392) #22	Snu13 (ENSRNOG00000006762) #23	LOC100362109 (ENSRNOG00000030150)	Mei1 (ENSRNOG00000007003) #24	Ccdc134 (ENSRNOG00000007262) #25	Srebf2 (ENSRNOG00000007400) #27	Shisa8 (ENSRNOG00000049407) #28	Tnfrsf13c (ENSRNOG00000007664) #29	Cenpm (ENSRNOG00000023262) #31	Smim45 (ENSRNOG00000043197) #32	Septin3 (ENSRNOG00000007686) #34	Wbp2nl (ENSRNOG00000008038) #35	Naga (ENSRNOG00000008064) #36	Pheta2 (ENSRNOG00000042522)	Smdt1 (ENSRNOG00000070907)	Ndufa6 (ENSRNOG00000008569)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1277	ENSNGAG00000017697	Rbx1 (ENSNGAG00000016899)	Ep300 (ENSNGAG00000000598)	L3mbtl2 (ENSNGAG00000019279) #10	Chadl (ENSNGAG00000009432) #11	Rangap1 (ENSNGAG00000014916) #13	Zc3h7b (ENSNGAG00000013813) #14	Tef (ENSNGAG00000011439) #15	Tob2 (ENSNGAG00000008266)	Phf5a (ENSNGAG00000001430) #16	ENSNGAG00000015866 #17	Polr3h (ENSNGAG00000015009) #18	Csdc2 (ENSNGAG00000011207) #19	Pmm1 (ENSNGAG00000019009) #20	Desi1 (ENSNGAG00000015435) #21	Xrcc6 (ENSNGAG00000013750) #22	Snu13 (ENSNGAG00000012960) #23	ENSNGAG00000020669	Mei1 (ENSNGAG00000020170) #24	Ccdc134 (ENSNGAG00000016417) #25	Srebf2 (ENSNGAG00000002154) #27	Shisa8 (ENSNGAG00000016429) #28	Tnfrsf13c (ENSNGAG00000020357) #29	Cenpm (ENSNGAG00000020088) #31	Smim45 (ENSNGAG00000016609) #32	ENSNGAG00000020671 #34	Wbp2nl (ENSNGAG00000001470) #35	Naga (ENSNGAG00000003704) #36	Pheta2 (ENSNGAG00000020894)	Smdt1 (ENSNGAG00000020665)	Ndufa6 (ENSNGAG00000009851)
Lesser Egyptian jerboa	MODERN SPECIES	42	Xpnpep3 (ENSJJAG00000016807)	Rbx1 (ENSJJAG00000021228)	Ep300 (ENSJJAG00000020124)	L3mbtl2 (ENSJJAG00000016073) #10	Chadl (ENSJJAG00000016665) #11	Rangap1 (ENSJJAG00000014253) #13	Zc3h7b (ENSJJAG00000013804) #14	Tef (ENSJJAG00000010078) #15	Tob2 (ENSJJAG00000005169)	Phf5a (ENSJJAG00000011261) #16	Aco2 (ENSJJAG00000014029) #17	Polr3h (ENSJJAG00000017986) #18	Csdc2 (ENSJJAG00000019289) #19	ENSJJAG00000018569 #20	Desi1 (ENSJJAG00000019532) #21	Xrcc6 (ENSJJAG00000017136) #22	Snu13 (ENSJJAG00000014378) #23	Mei1 (ENSJJAG00000016715) #24	ENSJJAG00000014856	Ccdc134 (ENSJJAG00000016451) #25	Srebf2 (ENSJJAG00000018773) #27	ENSJJAG00000016883 #28	ENSJJAG00000020963 #29	Cenpm (ENSJJAG00000019704) #31	Smim45 (ENSJJAG00000005576) #32	ENSJJAG00000019615 #34	ENSJJAG00000019913	Naga (ENSJJAG00000021575) #36	Pheta2 (ENSJJAG00000005475)	Smdt1 (ENSJJAG00000017571)	Ndufa6 (ENSJJAG00000020053)
Kangaroo rat	MODERN SPECIES	398	Xpnpep3 (ENSDORG00000012776)	Rbx1 (ENSDORG00000014908)	Ep300 (ENSDORG00000010258)	L3mbtl2 (ENSDORG00000008914) #10	Chadl (ENSDORG00000027890) #11	Rangap1 (ENSDORG00000004657) #13	Zc3h7b (ENSDORG00000013794) #14	Tef (ENSDORG00000014982) #15	Tob2 (ENSDORG00000002204)	Phf5a (ENSDORG00000002205) #16	Aco2 (ENSDORG00000002209) #17	Polr3h (ENSDORG00000002215) #18	Csdc2 (ENSDORG00000024736) #19	Pmm1 (ENSDORG00000011755) #20	Desi1 (ENSDORG00000011407) #21	Xrcc6 (ENSDORG00000009101) #22	Snu13 (ENSDORG00000027409) #23	ENSDORG00000029855 #24	Ccdc134 (ENSDORG00000000689) #25	Srebf2 (ENSDORG00000000691) #27	ENSDORG00000028498 #28	Cenpm (ENSDORG00000011954) #31	ENSDORG00000014056 #34	Wbp2nl (ENSDORG00000026174) #35	Naga (ENSDORG00000008736) #36	Pheta2 (ENSDORG00000024472)	Smdt1 (ENSDORG00000008734)	Ndufa6 (ENSDORG00000008733)	ENSDORG00000001647	ENSDORG00000002430	ENSDORG00000006508
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35
Arctic ground squirrel	MODERN SPECIES	328	XPNPEP3 (ENSUPAG00010006211)	RBX1 (ENSUPAG00010006183)	EP300 (ENSUPAG00010006142)	L3MBTL2 (ENSUPAG00010006102) #10	CHADL (ENSUPAG00010006094) #11	RANGAP1 (ENSUPAG00010006037) #13	ZC3H7B (ENSUPAG00010006013) #14	TEF (ENSUPAG00010005998) #15	TOB2 (ENSUPAG00010005994)	PHF5A (ENSUPAG00010005980) #16	ACO2 (ENSUPAG00010005914) #17	POLR3H (ENSUPAG00010005893) #18	CSDC2 (ENSUPAG00010005885) #19	PMM1 (ENSUPAG00010005870) #20	DESI1 (ENSUPAG00010005863) #21	XRCC6 (ENSUPAG00010005843) #22	SNU13 (ENSUPAG00010005841) #23	ENSUPAG00010005838	MEI1 (ENSUPAG00010005795) #24	CCDC134 (ENSUPAG00010005788) #25	SREBF2 (ENSUPAG00010005777) #27	SHISA8 (ENSUPAG00010005772) #28	TNFRSF13C (ENSUPAG00010005768) #29	CENPM (ENSUPAG00010005746) #31	SMIM45 (ENSUPAG00010005741) #32	ENSUPAG00010005721 #34	ENSUPAG00010005713 #35	ENSUPAG00010005707	ENSUPAG00010005703
Squirrel	MODERN SPECIES	92	XPNPEP3 (ENSSTOG00000003200)	ENSSTOG00000015580	EP300 (ENSSTOG00000000722)	L3MBTL2 (ENSSTOG00000000242) #10	CHADL (ENSSTOG00000026534) #11	RANGAP1 (ENSSTOG00000016191) #13	ZC3H7B (ENSSTOG00000016196) #14	TEF (ENSSTOG00000019642) #15	ENSSTOG00000016206	PHF5A (ENSSTOG00000016207) #16	ACO2 (ENSSTOG00000016210) #17	POLR3H (ENSSTOG00000016215) #18	CSDC2 (ENSSTOG00000020429) #19	PMM1 (ENSSTOG00000026025) #20	DESI1 (ENSSTOG00000009480) #21	XRCC6 (ENSSTOG00000009490) #22	SNU13 (ENSSTOG00000009514) #23	MEI1 (ENSSTOG00000012870) #24	CCDC134 (ENSSTOG00000012907) #25	ENSSTOG00000012916 #27	SHISA8 (ENSSTOG00000019466) #28	ENSSTOG00000033610 #29	CENPM (ENSSTOG00000012933) #31	SMIM45 (ENSSTOG00000034807) #32	ENSSTOG00000012963 #34
Alpin marmot	MODERN SPECIES	76	DNAJB7 (ENSMMMG00000004165)	XPNPEP3 (ENSMMMG00000004122)	RBX1 (ENSMMMG00000004102)	EP300 (ENSMMMG00000004029)	L3MBTL2 (ENSMMMG00000003930) #10	RANGAP1 (ENSMMMG00000003853) #13	ZC3H7B (ENSMMMG00000003824) #14	TEF (ENSMMMG00000003810) #15	TOB2 (ENSMMMG00000003805)	PHF5A (ENSMMMG00000003799) #16	ACO2 (ENSMMMG00000003764) #17	POLR3H (ENSMMMG00000003743) #18	CSDC2 (ENSMMMG00000003735) #19	PMM1 (ENSMMMG00000003696) #20	DESI1 (ENSMMMG00000003682) #21	ENSMMMG00000003671 #22	SNU13 (ENSMMMG00000003647) #23	ENSMMMG00000003627	MEI1 (ENSMMMG00000003545) #24	CCDC134 (ENSMMMG00000003517) #25	SREBF2 (ENSMMMG00000003454) #27	SHISA8 (ENSMMMG00000003440) #28	CENPM (ENSMMMG00000003399) #31	SMIM45 (ENSMMMG00000003396) #32	ENSMMMG00000003339 #34	ENSMMMG00000003326 #35	NAGA (ENSMMMG00000003269) #36	SMDT1 (ENSMMMG00000003226)	NDUFA6 (ENSMMMG00000003211)	ENSMMMG00000003138	TCF20 (ENSMMMG00000003101)
Eurasian red squirrel	MODERN SPECIES	14	ENSSVLG00005020321	EP300 (ENSSVLG00005020397)	L3MBTL2 (ENSSVLG00005020580) #10	CHADL (ENSSVLG00005020628) #11	ENSSVLG00005020695 #13	ENSSVLG00005020791 #13	ZC3H7B (ENSSVLG00005020817) #14	TEF (ENSSVLG00005020887) #15	TOB2 (ENSSVLG00005020946)	PHF5A (ENSSVLG00005020965) #16	ACO2 (ENSSVLG00005021008) #17	POLR3H (ENSSVLG00005021062) #18	CSDC2 (ENSSVLG00005021115) #19	PMM1 (ENSSVLG00005021168) #20	DESI1 (ENSSVLG00005021220) #21	XRCC6 (ENSSVLG00005021287) #22	ENSSVLG00005021427 ##23	MEI1 (ENSSVLG00005021530) #24	CCDC134 (ENSSVLG00005021846) #25	SREBF2 (ENSSVLG00005021885) #27	ENSSVLG00005021918	SHISA8 (ENSSVLG00005021957) #28	TNFRSF13C (ENSSVLG00005021994) #29	CENPM (ENSSVLG00005022024) #31	SMIM45 (ENSSVLG00005022101) #32	SEPTIN3 (ENSSVLG00005003473) #34	WBP2NL (ENSSVLG00005003578) #35	ENSSVLG00005003601	NAGA (ENSSVLG00005003614) #36	PHETA2 (ENSSVLG00005003635)	SMDT1 (ENSSVLG00005003647)
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.a.a ##23	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.a.a ##23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764
Long-tailed chinchilla	MODERN SPECIES	120	DNAJB7 (ENSCLAG00000016674)	ENSCLAG00000016739	EP300 (ENSCLAG00000016995)	L3MBTL2 (ENSCLAG00000017319) #10	CHADL (ENSCLAG00000016821) #11	RANGAP1 (ENSCLAG00000017330) #13	ZC3H7B (ENSCLAG00000015052) #14	TEF (ENSCLAG00000016418) #15	TOB2 (ENSCLAG00000016670)	ENSCLAG00000016714 #16	ACO2 (ENSCLAG00000016998) #17	POLR3H (ENSCLAG00000016948) #18	CSDC2 (ENSCLAG00000016705) #19	PMM1 (ENSCLAG00000016748) #20	DESI1 (ENSCLAG00000016871) #21	XRCC6 (ENSCLAG00000016669) #22	SNU13 (ENSCLAG00000017182) ##23	ENSCLAG00000016769	ENSCLAG00000017166 #24	CCDC134 (ENSCLAG00000017160) #25	SREBF2 (ENSCLAG00000017059) #27	ENSCLAG00000016102 #28	TNFRSF13C (ENSCLAG00000017293) #29	CENPM (ENSCLAG00000017021) #31	SMIM45 (ENSCLAG00000018061) #32	ENSCLAG00000017190 #34	WBP2NL (ENSCLAG00000017175) #35	NAGA (ENSCLAG00000017177) #36	PHETA2 (ENSCLAG00000017176)	SMDT1 (ENSCLAG00000016250)	NDUFA6 (ENSCLAG00000016285)
Degu	MODERN SPECIES	197	IFT25 (ENSODEG00000013069)	DIO1 (ENSODEG00000012387)	ENSODEG00000019895	L3MBTL2 (ENSODEG00000013665) #10	CHADL (ENSODEG00000012116) #11	RANGAP1 (ENSODEG00000014583) #13	ZC3H7B (ENSODEG00000012411) #14	TEF (ENSODEG00000014126) #15	TOB2 (ENSODEG00000020030)	ENSODEG00000013125 #16	ACO2 (ENSODEG00000012550) #17	ENSODEG00000013641 #18	CSDC2 (ENSODEG00000015733) #19	PMM1 (ENSODEG00000012155) #20	DESI1 (ENSODEG00000012652) #21	XRCC6 (ENSODEG00000015847) #22	SNU13 (ENSODEG00000015632) ##23	ENSODEG00000012993 #24	CCDC134 (ENSODEG00000013183) #25	ENSODEG00000013510 #27	ENSODEG00000013575 #27	SHISA8 (ENSODEG00000013588) #28	TNFRSF13C (ENSODEG00000012515) #29	CENPM (ENSODEG00000012293) #31	SMIM45 (ENSODEG00000020050) #32	ENSODEG00000012406 #34	WBP2NL (ENSODEG00000013016) #35	NAGA (ENSODEG00000013910) #36	ENSODEG00000020147	PHETA2 (ENSODEG00000020107)	SMDT1 (ENSODEG00000012796)
Guinea pig	MODERN SPECIES	28	XPNPEP3 (ENSCPOG00000002291)	RBX1 (ENSCPOG00000035978)	EP300 (ENSCPOG00000005438)	L3MBTL2 (ENSCPOG00000021063) #10	CHADL (ENSCPOG00000026967) #11	RANGAP1 (ENSCPOG00000004404) #13	ZC3H7B (ENSCPOG00000004413) #14	TEF (ENSCPOG00000020591) #15	TOB2 (ENSCPOG00000031873)	PHF5A (ENSCPOG00000033309) #16	ACO2 (ENSCPOG00000012642) #17	POLR3H (ENSCPOG00000012650) #18	CSDC2 (ENSCPOG00000037976) #19	PMM1 (ENSCPOG00000014618) #20	DESI1 (ENSCPOG00000038083) #21	XRCC6 (ENSCPOG00000003542) #22	SNU13 (ENSCPOG00000040165) #23	ENSCPOG00000010113 #24	CCDC134 (ENSCPOG00000000617) #25	SREBF2 (ENSCPOG00000013199) #27	SHISA8 (ENSCPOG00000040084) #28	TNFRSF13C (ENSCPOG00000022735) #29	CENPM (ENSCPOG00000013206) #31	SMIM45 (ENSCPOG00000036254) #32	ENSCPOG00000013212 #34	WBP2NL (ENSCPOG00000013214) #35	NAGA (ENSCPOG00000021759) #36	PHETA2 (ENSCPOG00000037974)	SMDT1 (ENSCPOG00000038038)	NDUFA6 (ENSCPOG00000014525)	ENSCPOG00000033145
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	24	RBX1 (ENSHGLG00000014822)	EP300 (ENSHGLG00000015586)	L3MBTL2 (ENSHGLG00000018290) #10	CHADL (ENSHGLG00000018119) #11	RANGAP1 (ENSHGLG00000015526) #13	ZC3H7B (ENSHGLG00000012263) #14	TEF (ENSHGLG00000050605) #15	TOB2 (ENSHGLG00000009302)	PHF5A (ENSHGLG00000042397) #16	ENSHGLG00000041589	Aco2 (ENSHGLG00000015463) #17	POLR3H (ENSHGLG00000014795) #18	CSDC2 (ENSHGLG00000016778) #19	PMM1 (ENSHGLG00000016980) #20	DESI1 (ENSHGLG00000039030) #21	ENSHGLG00000018078 #22	SNU13 (ENSHGLG00000018808) #23	MEI1 (ENSHGLG00000017177) #24	CCDC134 (ENSHGLG00000015870) #25	SREBF2 (ENSHGLG00000010258) #27	SHISA8 (ENSHGLG00000006306) #28	TNFRSF13C (ENSHGLG00000005221) #29	CENPM (ENSHGLG00000005039) #31	SMIM45 (ENSHGLG00000020741) #32	ENSHGLG00000006998 #34	WBP2NL (ENSHGLG00000004979) #35	NAGA (ENSHGLG00000048767) #36	PHETA2 (ENSHGLG00000007647)	NDUFA6 (ENSHGLG00000040424)	ENSHGLG00000047435	ENSHGLG00000004933
Naked mole-rat female	MODERN SPECIES	17	ENSHGLG00000048100	PARD3B (ENSHGLG00000004982)	NRP2 (ENSHGLG00000010562)	ENSHGLG00000049876	INO80D (ENSHGLG00000018537)	NDUFS1 (ENSHGLG00000015179)	EEF1B2 (ENSHGLG00000015147)	ENSHGLG00000045433	CMKLR2 (ENSHGLG00000046982)	ENSHGLG00000044712	ADAM23 (ENSHGLG00000006393)	FAM237A (ENSHGLG00000030355)	ENSHGLG00000005368	MDH1B (ENSHGLG00000004936)	FASTKD2 (ENSHGLG00000004761)	ENSHGLG00000045814 #22	KLF7 (ENSHGLG00000044157)	ENSHGLG00000017319	ENSHGLG00000047324	ENSHGLG00000011676	ENSHGLG00000010806	ENSHGLG00000007598	ENSHGLG00000035240	ENSHGLG00000048045	ENSHGLG00000044286	ENSHGLG00000034881
Lagomorpha	ANCESTRAL SPECIES	76	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.`b.b
Rabbit	MODERN SPECIES	467	XPNPEP3 (ENSOCUG00000009642)	ENSOCUG00000035746	EP300 (ENSOCUG00000011434)	L3MBTL2 (ENSOCUG00000002689) #10	CHADL (ENSOCUG00000002701) #11	RANGAP1 (ENSOCUG00000002704) #13	ZC3H7B (ENSOCUG00000002712) #14	TEF (ENSOCUG00000012866) #15	TOB2 (ENSOCUG00000027909)	PHF5A (ENSOCUG00000012705) #16	ACO2 (ENSOCUG00000021368) #17	POLR3H (ENSOCUG00000007275) #18	CSDC2 (ENSOCUG00000006938) #19	PMM1 (ENSOCUG00000006941) #20	ENSOCUG00000011875 #21	XRCC6 (ENSOCUG00000006948) #22	SNU13 (ENSOCUG00000023785) #23	MEI1 (ENSOCUG00000013337) #24	CCDC134 (ENSOCUG00000013355) #25	SREBF2 (ENSOCUG00000003178) #27	ENSOCUG00000013186 #29	ENSOCUG00000008255 #31	SMIM45 (ENSOCUG00000035037) #32	ENSOCUG00000035445	ENSOCUG00000008260 #34	ENSOCUG00000004417 #35	NAGA (ENSOCUG00000006739) #36	PHETA2 (ENSOCUG00000001305)	ENSOCUG00000001303	NDUFA6 (ENSOCUG00000015446)	ENSOCUG00000026356
Pika	MODERN SPECIES	5261															DESI1 (ENSOPRG00000002375) #21	XRCC6 (ENSOPRG00000002386) #22	SNU13 (ENSOPRG00000002422) #23	MEI1 (ENSOPRG00000002429) #24
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Eulipotyphla	ANCESTRAL SPECIES	2238																ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23
Common shrew	MODERN SPECIES	6366																XRCC6 (ENSSARG00000008024) #22	SNU13 (ENSSARG00000008036) #23
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Suina	ANCESTRAL SPECIES	21	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Chacoan peccary	MODERN SPECIES	871	RBX1 (ENSCWAG00000012787)	ENSCWAG00000012771	EP300 (ENSCWAG00000012442)	L3MBTL2 (ENSCWAG00000012412) #10	CHADL (ENSCWAG00000012334) #11	RANGAP1 (ENSCWAG00000012282) #13	ZC3H7B (ENSCWAG00000012215) #14	TEF (ENSCWAG00000012151) #15	TOB2 (ENSCWAG00000012139)	PHF5A (ENSCWAG00000012101) #16	ACO2 (ENSCWAG00000012041) #17	POLR3H (ENSCWAG00000011965) #18	CSDC2 (ENSCWAG00000011932) #19	PMM1 (ENSCWAG00000011902) #20	DESI1 (ENSCWAG00000011787) #21	XRCC6 (ENSCWAG00000011601) #22	SNU13 (ENSCWAG00000011528) #23	MEI1 (ENSCWAG00000011137) #24	CCDC134 (ENSCWAG00000011088) #25	SREBF2 (ENSCWAG00000011027) #27	SHISA8 (ENSCWAG00000019272) #28	TNFRSF13C (ENSCWAG00000019192) #29	CENPM (ENSCWAG00000019140) #31	SMIM45 (ENSCWAG00000019128) #32	SEPTIN3 (ENSCWAG00000018779) #34	WBP2NL (ENSCWAG00000018697) #35	PHETA2 (ENSCWAG00000018670)	NAGA (ENSCWAG00000018641) #36	SMDT1 (ENSCWAG00000018626)	ENSCWAG00000018592	CYP2D6 (ENSCWAG00000018484)
Pig	MODERN SPECIES	13	XPNPEP3 (ENSSSCG00000033823)	ENSSSCG00000034230	EP300 (ENSSSCG00000000068)	L3MBTL2 (ENSSSCG00000000066) #10	CHADL (ENSSSCG00000000067) #11	RANGAP1 (ENSSSCG00000028202) #13	ZC3H7B (ENSSSCG00000033036) #14	TEF (ENSSSCG00000035152) #15	TOB2 (ENSSSCG00000037958)	PHF5A (ENSSSCG00000035082) #16	ACO2 (ENSSSCG00000000064) #17	POLR3H (ENSSSCG00000000063) #18	CSDC2 (ENSSSCG00000000062) #19	PMM1 (ENSSSCG00000000061) #20	DESI1 (ENSSSCG00000034265) #21	XRCC6 (ENSSSCG00000000059) #22	SNU13 (ENSSSCG00000000058) #23	ENSSSCG00000057322	MEI1 (ENSSSCG00000034405) #24	CCDC134 (ENSSSCG00000035565) #25	SREBF2 (ENSSSCG00000026092) #27	SHISA8 (ENSSSCG00000035755) #28	TNFRSF13C (ENSSSCG00000039074) #29	CENPM (ENSSSCG00000035991) #31	SMIM45 (ENSSSCG00000057743) #32	SEPTIN3 (ENSSSCG00000000040) #34	ENSSSCG00000062925 #35	PHETA2 (ENSSSCG00000038492)	NAGA (ENSSSCG00000000050) #36	SMDT1 (ENSSSCG00000020945)	NDUFA6 (ENSSSCG00000000045)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000163470	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Cetacea	DUPLICATION
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000163470	ENSGT00940000155618.fb.a	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.m #22	ENSGT00550000074840.y.b.k #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00510000046986.x.b.b.b.b	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00390000001347.v.n.b	ENSGT00940000153657.A.k.a	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.m #22	ENSGT00550000074840.y.b.k #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00510000046986.x.b.b.b.b	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00940000153657.A.k.a	ENSGT00940000155618.fb.a	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518.g #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.m #22	ENSGT00550000074840.y.b.k #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00510000046986.x.b.b.b.b	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000155618.fb.a	ENSGT00420000029792.i	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518.g #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.m #22	ENSGT00550000074840.y.b.k #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00510000046986.x.b.b.b.b	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000155618.fb.a	ENSGT00420000029792.i	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518.g #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B.m #22	ENSGT00550000074840.y.b.k #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00510000046986.x.b.b.b.b	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Narwhal	MODERN SPECIES	313	ENSMMNG00015017418	ENSMMNG00015017443	EP300 (ENSMMNG00015017471)	L3MBTL2 (ENSMMNG00015017671) #10	CHADL (ENSMMNG00015017707) #11	RANGAP1 (ENSMMNG00015017739) #13	ZC3H7B (ENSMMNG00015017794) #14	TEF (ENSMMNG00015017847) #15	TOB2 (ENSMMNG00015017903)	PHF5A (ENSMMNG00015017910) #16	ACO2 (ENSMMNG00015017952) #17	POLR3H (ENSMMNG00015018103) #18	CSDC2 (ENSMMNG00015018146) #19	PMM1 (ENSMMNG00015018177) #20	DESI1 (ENSMMNG00015018207) #21	ENSMMNG00015018237 #22	ENSMMNG00015018285	SNU13 (ENSMMNG00015018317) #23	MEI1 (ENSMMNG00015018390) #24	CCDC134 (ENSMMNG00015018478) #25	SREBF2 (ENSMMNG00015018518) #27	SHISA8 (ENSMMNG00015018579) #28	TNFRSF13C (ENSMMNG00015018599) #29	CENPM (ENSMMNG00015018648) #31	SMIM45 (ENSMMNG00015018673) #32	SEPTIN3 (ENSMMNG00015018733) #34	WBP2NL (ENSMMNG00015018901) #35	ENSMMNG00015018950	NAGA (ENSMMNG00015018971) #36	PHETA2 (ENSMMNG00015018993)	SMDT1 (ENSMMNG00015018999)
Beluga whale	MODERN SPECIES	111	ENSDLEG00000015706 #11	ENSDLEG00000015729 #13	ENSDLEG00000015788 #10	ENSDLEG00000015952 #11	ENSDLEG00000015992 #13	ZC3H7B (ENSDLEG00000016127) #14	TEF (ENSDLEG00000016157) #15	TOB2 (ENSDLEG00000016165)	PHF5A (ENSDLEG00000016171) #16	ACO2 (ENSDLEG00000016194) #17	POLR3H (ENSDLEG00000016302) #18	CSDC2 (ENSDLEG00000016311) #19	PMM1 (ENSDLEG00000016320) #20	DESI1 (ENSDLEG00000016339) #21	ENSDLEG00000016354	ENSDLEG00000016391 #22	SNU13 (ENSDLEG00000016619) #23	MEI1 (ENSDLEG00000016651) #24	ENSDLEG00000016945	SREBF2 (ENSDLEG00000016960) #27	SHISA8 (ENSDLEG00000016987) #28	TNFRSF13C (ENSDLEG00000016994) #29	ENSDLEG00000017022	SMIM45 (ENSDLEG00000017037) #32	ENSDLEG00000017044 #34	WBP2NL (ENSDLEG00000017060) #35	ENSDLEG00000017069	NAGA (ENSDLEG00000017073) #36	PHETA2 (ENSDLEG00000017087)	ENSDLEG00000017096	NDUFA6 (ENSDLEG00000017111)
Vaquita	MODERN SPECIES	1	ENSPSNG00000007559	EP300 (ENSPSNG00000007446)	ENSPSNG00000007413	L3MBTL2 (ENSPSNG00000007368) #10	CHADL (ENSPSNG00000007294) #11	RANGAP1 (ENSPSNG00000007244) #13	ZC3H7B (ENSPSNG00000007187) #14	TEF (ENSPSNG00000007130) #15	TOB2 (ENSPSNG00000007102)	PHF5A (ENSPSNG00000007072) #16	ACO2 (ENSPSNG00000006999) #17	POLR3H (ENSPSNG00000006925) #18	CSDC2 (ENSPSNG00000006894) #19	PMM1 (ENSPSNG00000006869) #20	DESI1 (ENSPSNG00000006766) #21	ENSPSNG00000006727 #22	SNU13 (ENSPSNG00000006667) #23	MEI1 (ENSPSNG00000006612) #24	CCDC134 (ENSPSNG00000006568) #25	SREBF2 (ENSPSNG00000006495) #27	SHISA8 (ENSPSNG00000006462) #28	TNFRSF13C (ENSPSNG00000006405) #29	CENPM (ENSPSNG00000006337) #31	SMIM45 (ENSPSNG00000006298) #32	SEPTIN3 (ENSPSNG00000006102) #34	WBP2NL (ENSPSNG00000006022) #35	ENSPSNG00000005982	NAGA (ENSPSNG00000005931) #36	PHETA2 (ENSPSNG00000005897)	SMDT1 (ENSPSNG00000005880)	NDUFA6 (ENSPSNG00000005840)
Dolphin	MODERN SPECIES	1925													CSDC2 (ENSTTRG00000006736) #19	PMM1 (ENSTTRG00000006739) #20	DESI1 (ENSTTRG00000006743) #21	XRCC6 (ENSTTRG00000006749) #22
Sperm whale	MODERN SPECIES	17	SGSM3 (ENSPCTG00005010825)	MRTFA (ENSPCTG00005010942)	MCHR1 (ENSPCTG00005011192)	SLC25A17 (ENSPCTG00005011301)	ENSPCTG00005011468	XPNPEP3 (ENSPCTG00005011615)	DNAJB7 (ENSPCTG00005011732)	RBX1 (ENSPCTG00005011844)	EP300 (ENSPCTG00005011871)	ENSPCTG00005011975	PHF5A (ENSPCTG00005012016) #16	ENSPCTG00005012046 #18	CSDC2 (ENSPCTG00005012068) #19	PMM1 (ENSPCTG00005012103) #20	DESI1 (ENSPCTG00005012146) #21	ENSPCTG00005012209 #22	ENSPCTG00005012517 #23	ENSPCTG00005012612	ENSPCTG00005012634 #24	SREBF2 (ENSPCTG00005012672) #27	CENPM (ENSPCTG00005012915) #31	SMIM45 (ENSPCTG00005000215) #32	ENSPCTG00005000228	ENSPCTG00005000244 #35	POLDIP3 (ENSPCTG00005000280)	CYP2D6 (ENSPCTG00005000313)	TCF20 (ENSPCTG00005000372)	ARFGAP3 (ENSPCTG00005000424)	TTLL1 (ENSPCTG00005000492)	ENSPCTG00005000536	TTLL12 (ENSPCTG00005000551)
Blue whale	MODERN SPECIES	1	ENSBMSG00010010940	EP300 (ENSBMSG00010010998)	L3MBTL2 (ENSBMSG00010011148) #10	CHADL (ENSBMSG00010011175) #11	RANGAP1 (ENSBMSG00010011194) #13	ZC3H7B (ENSBMSG00010011209) #14	ENSBMSG00010011228 #15	TOB2 (ENSBMSG00010013844)	ENSBMSG00010013857 #16	ACO2 (ENSBMSG00010013926) #17	POLR3H (ENSBMSG00010014040) #18	ENSBMSG00010014114	CSDC2 (ENSBMSG00010014140) #19	PMM1 (ENSBMSG00010014166) #20	DESI1 (ENSBMSG00010014206) #21	ENSBMSG00010014265 #22	ENSBMSG00010014449 #23	MEI1 (ENSBMSG00010014550) #24	CCDC134 (ENSBMSG00010014735) #25	SREBF2 (ENSBMSG00010014793) #27	SHISA8 (ENSBMSG00010014932) #28	TNFRSF13C (ENSBMSG00010014956) #29	CENPM (ENSBMSG00010014993) #31	SMIM45 (ENSBMSG00010015039) #32	SEPTIN3 (ENSBMSG00010015107) #34	WBP2NL (ENSBMSG00010015557) #35	ENSBMSG00010015604	NAGA (ENSBMSG00010015635) #36	PHETA2 (ENSBMSG00010015663)	SMDT1 (ENSBMSG00010015681)	ENSBMSG00010015702
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000011383	ENSGT00940000154721.vb.a	ENSGT00390000009130.a.a.b	ENSGT00940000158747	ENSGT00940000156814	ENSGT00940000161231	ENSGT00940000156804	ENSGT00940000162106	ENSGT00940000165146	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a	ENSGT00940000155567	ENSGT00940000159777	ENSGT00940000153239.B.n #22	ENSGT00530000063460.A.b	ENSGT01010000228899	ENSGT00390000002096	ENSGT00940000160851	ENSGT00940000155776	ENSGT00940000158504	ENSGT00950000182993.A.b	ENSGT00390000015433	ENSGT00390000016532	ENSGT00800000124150	ENSGT00390000010427.c	ENSGT00940000155464	ENSGT00940000161387	ENSGT00390000006320	ENSGT00390000007918
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000011383	ENSGT00940000154721.vb.a	ENSGT00390000009130.a.a.b	ENSGT00940000158747	ENSGT00940000156814	ENSGT00940000161231	ENSGT00940000156804	ENSGT00940000162106	ENSGT00940000165146	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a	ENSGT00940000155567	ENSGT00940000159777	ENSGT00940000153239.B.n #22	ENSGT00530000063460.A.b	ENSGT01010000228899	ENSGT00390000002096	ENSGT00940000160851	ENSGT00940000155776	ENSGT00940000158504	ENSGT00950000182993.A.b	ENSGT00390000015433	ENSGT00390000016532	ENSGT00800000124150	ENSGT00390000010427.c	ENSGT00940000155464	ENSGT00940000161387	ENSGT00390000006320	ENSGT00390000007918
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000006707.r.g	ENSGT00390000011383	ENSGT00390000009130.a.a.b	ENSGT00940000158747	ENSGT00940000156814	ENSGT00940000161231	ENSGT00940000156804	ENSGT00940000162106	ENSGT00940000165146	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a	ENSGT00940000155567	ENSGT00940000159777	ENSGT00940000153239.B.n #22	ENSGT00530000063460.A.b	ENSGT01010000228899	ENSGT00390000002096	ENSGT00940000160851	ENSGT00940000155776	ENSGT00940000158504	ENSGT00950000182993.A.b	ENSGT00390000015433	ENSGT00390000016532	ENSGT00800000124150	ENSGT00390000010427.c	ENSGT00940000155464	ENSGT00940000161387	ENSGT00390000006320	ENSGT00390000007918
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159987	ENSGT00390000014416	ENSGT00390000011383	ENSGT00390000006707.r.g	ENSGT00390000009130.a.a.b	ENSGT00940000158747	ENSGT00940000156814	ENSGT00940000161231	ENSGT00940000156804	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a	ENSGT00940000155567	ENSGT00940000159777	ENSGT00940000153239.B.n #22	ENSGT00530000063460.A.b	ENSGT01010000228899	ENSGT00390000002096	ENSGT00940000160851	ENSGT00940000155725.c.b	ENSGT00940000155776	ENSGT00940000158504	ENSGT00950000182993.A.b	ENSGT00390000015433	ENSGT00390000016532	ENSGT00800000124150	ENSGT00390000010427.c	ENSGT00940000155464	ENSGT00940000161387	ENSGT00390000006320
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00390000014416	ENSGT00390000011383	ENSGT00390000006707.r.g	ENSGT00390000009130.a.a.b	ENSGT00940000158747	ENSGT00940000156814	ENSGT00940000161231	ENSGT00940000156804	ENSGT00940000162106	ENSGT00390000005254.i.a.b.c	ENSGT00940000158865	ENSGT00390000017462	ENSGT01050000244902.a.a.a.a	ENSGT00940000155567	ENSGT00940000159777	ENSGT00940000153239.B.n #22	ENSGT00530000063460.A.b	ENSGT01010000228899	ENSGT00390000002096	ENSGT00940000160851	ENSGT00940000155725.c.b	ENSGT00940000155776	ENSGT00940000158504	ENSGT00950000182993.A.b	ENSGT00390000015433	ENSGT00390000016532	ENSGT00800000124150	ENSGT00390000010427.c	ENSGT00940000155464	ENSGT00940000161387	ENSGT00390000006320
Narwhal	MODERN SPECIES	298	RIMOC1 (ENSMMNG00015004141)	OXCT1 (ENSMMNG00015004110)	ENSMMNG00015004093	PLCXD3 (ENSMMNG00015004082)	ENSMMNG00015004073	C6 (ENSMMNG00015004038)	MROH2B (ENSMMNG00015003995)	C7 (ENSMMNG00015003958)	ENSMMNG00015003941	RPL37 (ENSMMNG00015003911)	PRKAA1 (ENSMMNG00015003860)	TTC33 (ENSMMNG00015003825)	PTGER4 (ENSMMNG00015003808)	DAB2 (ENSMMNG00015003683)	C9 (ENSMMNG00015003592)	ENSMMNG00015003575 #22	FYB1 (ENSMMNG00015003499)	ENSMMNG00015003438	RICTOR (ENSMMNG00015003392)	OSMR (ENSMMNG00015003314)	ENSMMNG00015003299	ENSMMNG00015003285	LIFR (ENSMMNG00015003256)	EGFLAM (ENSMMNG00015003099)	ENSMMNG00015003038	GDNF (ENSMMNG00015003016)	WDR70 (ENSMMNG00015002899)	NUP155 (ENSMMNG00015002811)	CPLANE1 (ENSMMNG00015002752)	NIPBL (ENSMMNG00015002616)	SLC1A3 (ENSMMNG00015002486)
Beluga whale	MODERN SPECIES	71	ENSDLEG00000007959	PLCXD3 (ENSDLEG00000007969)	ENSDLEG00000007976	C6 (ENSDLEG00000007985)	ENSDLEG00000008015	ENSDLEG00000008047	C7 (ENSDLEG00000008142)	ENSDLEG00000008182	ENSDLEG00000008197	ENSDLEG00000008233	PRKAA1 (ENSDLEG00000008270)	TTC33 (ENSDLEG00000008324)	PTGER4 (ENSDLEG00000008354)	DAB2 (ENSDLEG00000008396)	C9 (ENSDLEG00000008449)	ENSDLEG00000008481 #22	ENSDLEG00000008494	ENSDLEG00000008508	RICTOR (ENSDLEG00000008761)	OSMR (ENSDLEG00000011096)	ENSDLEG00000011140	LIFR (ENSDLEG00000011161)	EGFLAM (ENSDLEG00000011222)	GDNF (ENSDLEG00000011285)	WDR70 (ENSDLEG00000011311)	NUP155 (ENSDLEG00000011741)	CPLANE1 (ENSDLEG00000012250)	NIPBL (ENSDLEG00000012577)	SLC1A3 (ENSDLEG00000012807)	RANBP3L (ENSDLEG00000012986)	NADK2 (ENSDLEG00000013071)
Vaquita	MODERN SPECIES	14	OXCT1 (ENSPSNG00000013489)	PLCXD3 (ENSPSNG00000013744)	ENSPSNG00000013802	C6 (ENSPSNG00000003100)	ENSPSNG00000003137	ENSPSNG00000003175	C7 (ENSPSNG00000003232)	RPL37 (ENSPSNG00000003299)	PRKAA1 (ENSPSNG00000003371)	TTC33 (ENSPSNG00000003417)	PTGER4 (ENSPSNG00000003430)	ENSPSNG00000003449	DAB2 (ENSPSNG00000003484)	C9 (ENSPSNG00000003566)	FYB1 (ENSPSNG00000003635)	ENSPSNG00000003737 #22	RICTOR (ENSPSNG00000003768)	OSMR (ENSPSNG00000003821)	ENSPSNG00000003851	ENSPSNG00000003863	LIFR (ENSPSNG00000003881)	EGFLAM (ENSPSNG00000003979)	GDNF (ENSPSNG00000004104)	WDR70 (ENSPSNG00000004131)	NUP155 (ENSPSNG00000004202)	CPLANE1 (ENSPSNG00000004315)	NIPBL (ENSPSNG00000004448)	SLC1A3 (ENSPSNG00000004628)	RANBP3L (ENSPSNG00000004771)	NADK2 (ENSPSNG00000004871)	SKP2 (ENSPSNG00000004995)
Sperm whale	MODERN SPECIES	19	ENSPCTG00005019287	OXCT1 (ENSPCTG00005019136)	PLCXD3 (ENSPCTG00005019106)	ENSPCTG00005019087	C7 (ENSPCTG00005018916)	ENSPCTG00005018695	ENSPCTG00005018427	C6 (ENSPCTG00005018209)	ENSPCTG00005018189	ENSPCTG00005018160	PRKAA1 (ENSPCTG00005018088)	TTC33 (ENSPCTG00005018058)	PTGER4 (ENSPCTG00005018041)	DAB2 (ENSPCTG00005017944)	C9 (ENSPCTG00005017803)	ENSPCTG00005017759 #22	ENSPCTG00005017725	RICTOR (ENSPCTG00005017549)	OSMR (ENSPCTG00005017459)	ENSPCTG00005017392	LIFR (ENSPCTG00005017295)	EGFLAM (ENSPCTG00005016321)	GDNF (ENSPCTG00005016211)	WDR70 (ENSPCTG00005016122)	NUP155 (ENSPCTG00005015912)	CPLANE1 (ENSPCTG00005015256)	NIPBL (ENSPCTG00005014793)	SLC1A3 (ENSPCTG00005014533)	RANBP3L (ENSPCTG00005013974)	NADK2 (ENSPCTG00005013471)	LMBRD2 (ENSPCTG00005013304)
Blue whale	MODERN SPECIES	14	FBXO4 (ENSBMSG00010002261)	ENSBMSG00010002244	RIMOC1 (ENSBMSG00010002238)	ENSBMSG00010002229	OXCT1 (ENSBMSG00010002211)	PLCXD3 (ENSBMSG00010002197)	C6 (ENSBMSG00010002171)	MROH2B (ENSBMSG00010002084)	C7 (ENSBMSG00010002048)	RPL37 (ENSBMSG00010002005)	PRKAA1 (ENSBMSG00010001960)	TTC33 (ENSBMSG00010001948)	PTGER4 (ENSBMSG00010001942)	DAB2 (ENSBMSG00010001905)	C9 (ENSBMSG00010001883)	ENSBMSG00010001877 #22	ENSBMSG00010001871	ENSBMSG00010001865	RICTOR (ENSBMSG00010001806)	OSMR (ENSBMSG00010001765)	EGFLAM (ENSBMSG00010001547)	GDNF (ENSBMSG00010001506)	WDR70 (ENSBMSG00010001492)	NUP155 (ENSBMSG00010001449)	CPLANE1 (ENSBMSG00010001402)	NIPBL (ENSBMSG00010001354)	SLC1A3 (ENSBMSG00010001259)	RANBP3L (ENSBMSG00010001078)	NADK2 (ENSBMSG00010000976)	SKP2 (ENSBMSG00010000865)	LMBRD2 (ENSBMSG00010000840)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Yarkand deer	MODERN SPECIES	14	ENSCHYG00000021280	ENSCHYG00000021391	EP300 (ENSCHYG00000021494)	L3MBTL2 (ENSCHYG00000021964) #10	CHADL (ENSCHYG00000022049) #11	RANGAP1 (ENSCHYG00000022092) #13	ZC3H7B (ENSCHYG00000022171) #14	TEF (ENSCHYG00000022489) #15	TOB2 (ENSCHYG00000022537)	PHF5A (ENSCHYG00000022548) #16	ACO2 (ENSCHYG00000022583) #17	POLR3H (ENSCHYG00000022721) #18	CSDC2 (ENSCHYG00000022821) #19	PMM1 (ENSCHYG00000022842) #20	DESI1 (ENSCHYG00000022886) #21	XRCC6 (ENSCHYG00000022928) #22	SNU13 (ENSCHYG00000023097) #23	ENSCHYG00000023150	MEI1 (ENSCHYG00000023169) #24	CCDC134 (ENSCHYG00000023225) #25	SREBF2 (ENSCHYG00000023277) #27	SHISA8 (ENSCHYG00000023421) #28	TNFRSF13C (ENSCHYG00000023442) #29	CENPM (ENSCHYG00000023485) #31	ENSCHYG00000023626 #32	SEPTIN3 (ENSCHYG00000023685) #34	ENSCHYG00000023904 #35	NAGA (ENSCHYG00000023946) #36	PHETA2 (ENSCHYG00000024027)	SMDT1 (ENSCHYG00000024078)	NDUFA6 (ENSCHYG00000024109)
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Siberian musk deer	MODERN SPECIES	1247	XPNPEP3 (ENSMMSG00000014083)	RBX1 (ENSMMSG00000014067)	EP300 (ENSMMSG00000013986)	L3MBTL2 (ENSMMSG00000013921) #10	CHADL (ENSMMSG00000013880) #11	RANGAP1 (ENSMMSG00000013802) #13	ZC3H7B (ENSMMSG00000013723) #14	TEF (ENSMMSG00000013679) #15	TOB2 (ENSMMSG00000013665)	ENSMMSG00000013644 #16	ACO2 (ENSMMSG00000013563) #17	POLR3H (ENSMMSG00000013540) #18	CSDC2 (ENSMMSG00000013524) #19	PMM1 (ENSMMSG00000013501) #20	DESI1 (ENSMMSG00000013489) #21	XRCC6 (ENSMMSG00000013395) #22	SNU13 (ENSMMSG00000024016) #23	ENSMMSG00000024007	MEI1 (ENSMMSG00000023993) #24	CCDC134 (ENSMMSG00000023987) #25	SREBF2 (ENSMMSG00000023975) #27	SHISA8 (ENSMMSG00000023969) #28	TNFRSF13C (ENSMMSG00000023964) #29	CENPM (ENSMMSG00000023955) #31	SMIM45 (ENSMMSG00000023952) #32	SEPTIN3 (ENSMMSG00000023945) #34	WBP2NL (ENSMMSG00000023938) #35	NAGA (ENSMMSG00000023930) #36	PHETA2 (ENSMMSG00000023924)	SMDT1 (ENSMMSG00000023921)	NDUFA6 (ENSMMSG00000023914)
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Caprinae	ANCESTRAL SPECIES		ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	19	DNAJB7 (ENSOARG00020024159)	RBX1 (ENSOARG00020024169)	EP300 (ENSOARG00020024211)	L3MBTL2 (ENSOARG00020024288) #10	CHADL (ENSOARG00020024330) #11	RANGAP1 (ENSOARG00020024343) #13	ZC3H7B (ENSOARG00020024392) #14	TEF (ENSOARG00020024430) #15	TOB2 (ENSOARG00020024450)	PHF5A (ENSOARG00020024461) #16	ACO2 (ENSOARG00020024476) #17	POLR3H (ENSOARG00020024546) #18	CSDC2 (ENSOARG00020024566) #19	PMM1 (ENSOARG00020024579) #20	DESI1 (ENSOARG00020024591) #21	ENSOARG00020024613 #22	ENSOARG00020024631 #23	ENSOARG00020024666	MEI1 (ENSOARG00020024711) #24	CCDC134 (ENSOARG00020024805) #25	SREBF2 (ENSOARG00020024824) #27	SHISA8 (ENSOARG00020024872) #28	TNFRSF13C (ENSOARG00020024884) #29	CENPM (ENSOARG00020024901) #31	SMIM45 (ENSOARG00020024917) #32	ENSOARG00020000167 #34	WBP2NL (ENSOARG00020000252) #35	NAGA (ENSOARG00020000276) #36	PHETA2 (ENSOARG00020000294)	SMDT1 (ENSOARG00020000309)	NDUFA6 (ENSOARG00020000319)
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020002630	BACE2 (ENSOARG00020002588)	ENSOARG00020002557	ENSOARG00020002543	DSCAM (ENSOARG00020002425)	PCP4 (ENSOARG00020002413)	ENSOARG00020002404	B3GALT5 (ENSOARG00020002400)	SH3BGR (ENSOARG00020002389)	LCA5L (ENSOARG00020002371)	GET1 (ENSOARG00020002343)	ENSOARG00020002318	BRWD1 (ENSOARG00020002189)	PSMG1 (ENSOARG00020002147)	ENSOARG00020002138	ENSOARG00020002122 #22	ATP2C1 (ENSOARG00020001400)	ASTE1 (ENSOARG00020001290)	NEK11 (ENSOARG00020001241)	NUDT16 (ENSOARG00020001207)	MRPL3 (ENSOARG00020001178)	ENSOARG00020001145	CPNE4 (ENSOARG00020001093)	ACPP (ENSOARG00020001016)	DNAJC13 (ENSOARG00020000598)	ACKR4 (ENSOARG00020000542)	UBA5 (ENSOARG00020000465)	ACAD11 (ENSOARG00020000253)	TMEM108 (ENSOARG00020000139)	BFSP2 (ENSOARG00020000125)	ENSOARG00020000062
Goat	MODERN SPECIES	24	DNAJB7 (ENSCHIG00000012831)	ENSCHIG00000025708	EP300 (ENSCHIG00000017767)	L3MBTL2 (ENSCHIG00000021479) #10	CHADL (ENSCHIG00000025971) #11	RANGAP1 (ENSCHIG00000026389) #13	ZC3H7B (ENSCHIG00000020469) #14	TEF (ENSCHIG00000016008) #15	TOB2 (ENSCHIG00000003528)	PHF5A (ENSCHIG00000015826) #16	ACO2 (ENSCHIG00000007877) #17	POLR3H (ENSCHIG00000013984) #18	CSDC2 (ENSCHIG00000021658) #19	PMM1 (ENSCHIG00000006787) #20	DESI1 (ENSCHIG00000017498) #21	XRCC6 (ENSCHIG00000012853) #22	ENSCHIG00000015834 #23	ENSCHIG00000017103	MEI1 (ENSCHIG00000014057) #24	CCDC134 (ENSCHIG00000008926) #25	ENSCHIG00000023993	SREBF2 (ENSCHIG00000020010) #27	SHISA8 (ENSCHIG00000014119) #28	TNFRSF13C (ENSCHIG00000016982) #29	CENPM (ENSCHIG00000011481) #31	SMIM45 (ENSCHIG00000008353) #32	ENSCHIG00000016257 #34	WBP2NL (ENSCHIG00000015876) #35	NAGA (ENSCHIG00000026860) #36	PHETA2 (ENSCHIG00000006843)	SMDT1 (ENSCHIG00000020634)
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.d #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Bos	ANCESTRAL SPECIES	2	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.d #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT01100000263480.a.a.b.b.b.b.a.b.b	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Bos_b	ANCESTRAL SPECIES	30	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100.d #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT01100000263480.a.a.b.b.b.b.a.b.b	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Cow	MODERN SPECIES	24	DNAJB7 (ENSBTAG00000006205)	RBX1 (ENSBTAG00000053583)	EP300 (ENSBTAG00000016198)	L3MBTL2 (ENSBTAG00000030222) #10	CHADL (ENSBTAG00000040106) #11	RANGAP1 (ENSBTAG00000012481) #13	ZC3H7B (ENSBTAG00000002782) #14	TEF (ENSBTAG00000016580) #15	TOB2 (ENSBTAG00000015109)	PHF5A (ENSBTAG00000006423) #16	ACO2 (ENSBTAG00000006429) #17	POLR3H (ENSBTAG00000005311) #18	CSDC2 (ENSBTAG00000004004) #19	PMM1 (ENSBTAG00000004009) #20	DESI1 (ENSBTAG00000047942) #21	XRCC6 (ENSBTAG00000006103) #22	SNU13 (ENSBTAG00000006104) #23	ENSBTAG00000047629	MEI1 (ENSBTAG00000004488) #24	CCDC134 (ENSBTAG00000021173) #25	SREBF2 (ENSBTAG00000014265) #27	SHISA8 (ENSBTAG00000051879) #28	TNFRSF13C (ENSBTAG00000026489) #29	CENPM (ENSBTAG00000009956) #31	SMIM45 (ENSBTAG00000050336) #32	SEPTIN3 (ENSBTAG00000013173) #34	WBP2NL (ENSBTAG00000013174) #35	NAGA (ENSBTAG00000009506) #36	PHETA2 (ENSBTAG00000009507)	SMDT1 (ENSBTAG00000009508)	NDUFA6 (ENSBTAG00000009509)
Hybrid Bos Indicus	MODERN SPECIES	24	ENSBIXG00005028979	EP300 (ENSBIXG00005029142)	L3MBTL2 (ENSBIXG00005001768) #10	CHADL (ENSBIXG00005001706) #11	RANGAP1 (ENSBIXG00005029195) #13	ZC3H7B (ENSBIXG00005005261) #14	TEF (ENSBIXG00005030291) #15	TOB2 (ENSBIXG00005030282)	PHF5A (ENSBIXG00005030276) #16	ACO2 (ENSBIXG00005030244) #17	POLR3H (ENSBIXG00005030223) #18	CSDC2 (ENSBIXG00005030210) #19	PMM1 (ENSBIXG00005030190) #20	ENSBIXG00005030184	DESI1 (ENSBIXG00005030174) #21	XRCC6 (ENSBIXG00005030124) #22	SNU13 (ENSBIXG00005030086) #23	ENSBIXG00005030078	MEI1 (ENSBIXG00005030034) #24	CCDC134 (ENSBIXG00005030005) #25	SREBF2 (ENSBIXG00005029968) #27	SHISA8 (ENSBIXG00005029949) #28	TNFRSF13C (ENSBIXG00005029923) #29	CENPM (ENSBIXG00005029911) #31	ENSBIXG00005029901	SMIM45 (ENSBIXG00005029896) #32	SEPTIN3 (ENSBIXG00005029864) #34	WBP2NL (ENSBIXG00005029846) #35	NAGA (ENSBIXG00005029828) #36	PHETA2 (ENSBIXG00005029790)	NDUFA6 (ENSBIXG00005029777)
Bos_a	ANCESTRAL SPECIES	24	ENSGT00940000168153	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.a.a.b	ENSGT00730000111100.d #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT01100000263480.a.a.b.b.b.b.a.b.b	ENSGT00420000030724 #32	ENSGT00960000192472	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686
Wild yak	MODERN SPECIES	2416	DNAJB7 (ENSBMUG00000016085)	ENSBMUG00000016140	EP300 (ENSBMUG00000016206)	L3MBTL2 (ENSBMUG00000016250) #10	ENSBMUG00000016306 #11	RANGAP1 (ENSBMUG00000016341) #13	ZC3H7B (ENSBMUG00000016375) #14	TEF (ENSBMUG00000016387) #15	ENSBMUG00000016406	PHF5A (ENSBMUG00000016413) #16	ACO2 (ENSBMUG00000016428) #17	POLR3H (ENSBMUG00000016468) #18	CSDC2 (ENSBMUG00000016496) #19	PMM1 (ENSBMUG00000016511) #20	ENSBMUG00000016533	XRCC6 (ENSBMUG00000016669) #22	SNU13 (ENSBMUG00000016711) #23	ENSBMUG00000016715	MEI1 (ENSBMUG00000016769) #24	CCDC134 (ENSBMUG00000016817) #25
Domestic yak	MODERN SPECIES	24	L3MBTL2 (ENSBGRG00000006582) #10	CHADL (ENSBGRG00000006835) #11	RANGAP1 (ENSBGRG00000006909) #13	ENSBGRG00000006985	ZC3H7B (ENSBGRG00000007031) #14	TEF (ENSBGRG00000007661) #15	TOB2 (ENSBGRG00000007744)	ACO2 (ENSBGRG00000007814) #17	PHF5A (ENSBGRG00000008433) #16	POLR3H (ENSBGRG00000008506) #18	CSDC2 (ENSBGRG00000008598) #19	PMM1 (ENSBGRG00000008653) #20	ENSBGRG00000008717	ENSBGRG00000008726 #21	DESI1 (ENSBGRG00000008734) #21	XRCC6 (ENSBGRG00000008781) #22	SNU13 (ENSBGRG00000009006) #23	ENSBGRG00000009110	MEI1 (ENSBGRG00000009152) #24	CCDC134 (ENSBGRG00000009488) #25	SREBF2 (ENSBGRG00000009606) #27	SHISA8 (ENSBGRG00000009867) #28	ENSBGRG00000009945 #29	CENPM (ENSBGRG00000009971) #31	ENSBGRG00000010122	SMIM45 (ENSBGRG00000010150) #32	ENSBGRG00000010178	ENSBGRG00000010196 #34	WBP2NL (ENSBGRG00000010352) #35	NAGA (ENSBGRG00000010420) #36	PHETA2 (ENSBGRG00000010652)
American bison	MODERN SPECIES	2520	ENSBBBG00000016560	XPNPEP3 (ENSBBBG00000016577)	ENSBBBG00000000757	EP300 (ENSBBBG00000004102)	L3MBTL2 (ENSBBBG00000008378) #10	RANGAP1 (ENSBBBG00000004143) #13	ZC3H7B (ENSBBBG00000007907) #14	TEF (ENSBBBG00000016815) #15	ENSBBBG00000016832	PHF5A (ENSBBBG00000004165) #16	ACO2 (ENSBBBG00000016876) #17	POLR3H (ENSBBBG00000016919) #18	CSDC2 (ENSBBBG00000004183) #19	PMM1 (ENSBBBG00000016943) #20	DESI1 (ENSBBBG00000016954) #21	XRCC6 (ENSBBBG00000017117) #22	SNU13 (ENSBBBG00000017154) #23	ENSBBBG00000017162	MEI1 (ENSBBBG00000017211) #24	CCDC134 (ENSBBBG00000004265) #25
Camelidae	ANCESTRAL SPECIES	28	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764	ENSGT00940000153331
Arabian camel	MODERN SPECIES	3	DNAJB7 (ENSCDRG00005016641)	RBX1 (ENSCDRG00005016650)	EP300 (ENSCDRG00005016690)	L3MBTL2 (ENSCDRG00005016922) #10	CHADL (ENSCDRG00005017024) #11	RANGAP1 (ENSCDRG00005017066) #13	ZC3H7B (ENSCDRG00005017099) #14	TEF (ENSCDRG00005017170) #15	TOB2 (ENSCDRG00005017252)	PHF5A (ENSCDRG00005017267) #16	ACO2 (ENSCDRG00005017299) #17	POLR3H (ENSCDRG00005017372) #18	CSDC2 (ENSCDRG00005017436) #19	PMM1 (ENSCDRG00005017476) #20	DESI1 (ENSCDRG00005017505) #21	XRCC6 (ENSCDRG00005003310) #22	SNU13 (ENSCDRG00005003357) #23	MEI1 (ENSCDRG00005003416) #24	CCDC134 (ENSCDRG00005003531) #25	SREBF2 (ENSCDRG00005003590) #27	TNFRSF13C (ENSCDRG00005003774) #29	CENPM (ENSCDRG00005003836) #31	ENSCDRG00005003942 #32	SEPTIN3 (ENSCDRG00005003987) #34	WBP2NL (ENSCDRG00005004277) #35	NAGA (ENSCDRG00005004327) #36	PHETA2 (ENSCDRG00005004362)	SMDT1 (ENSCDRG00005004376)	NDUFA6 (ENSCDRG00005004391)	ENSCDRG00005004425	CYP2D6 (ENSCDRG00005004461)
Alpaca	MODERN SPECIES	1738												TEF (ENSVPAG00000002612) #15	PHF5A (ENSVPAG00000002614) #16	ENSVPAG00000002616 #17	DESI1 (ENSVPAG00000002617) #21	XRCC6 (ENSVPAG00000002618) #22	SNU13 (ENSVPAG00000002620) #23	MEI1 (ENSVPAG00000002621) #24	CCDC134 (ENSVPAG00000002622) #25
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004.b #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Ursus	ANCESTRAL SPECIES	64	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004.b #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
American black bear	MODERN SPECIES	8080																XRCC6 (ENSUAMG00000013989) #22
Polar bear	MODERN SPECIES	248	ST13 (ENSUMAG00000021749)	DNAJB7 (ENSUMAG00000021748)	XPNPEP3 (ENSUMAG00000021746)	RBX1 (ENSUMAG00000021734)	EP300 (ENSUMAG00000021277)	L3MBTL2 (ENSUMAG00000021117) #10	RANGAP1 (ENSUMAG00000021110) #13	ZC3H7B (ENSUMAG00000021049) #14	TEF (ENSUMAG00000021034) #15	PHF5A (ENSUMAG00000021030) #16	ACO2 (ENSUMAG00000021024) #17	POLR3H (ENSUMAG00000021018) #18	CSDC2 (ENSUMAG00000021015) #19	PMM1 (ENSUMAG00000021010) #20	DESI1 (ENSUMAG00000021006) #21	XRCC6 (ENSUMAG00000021004) #22	SNU13 (ENSUMAG00000021000) #23	ENSUMAG00000020998	MEI1 (ENSUMAG00000020981) #24	CCDC134 (ENSUMAG00000020966) #25	SREBF2 (ENSUMAG00000020699) #27	CENPM (ENSUMAG00000020662) #31	SMIM45 (ENSUMAG00000020657) #32	SEPTIN3 (ENSUMAG00000020618) #34	ENSUMAG00000020596 #35	NAGA (ENSUMAG00000020591) #36	PHETA2 (ENSUMAG00000020587)	SMDT1 (ENSUMAG00000020585)	NDUFA6 (ENSUMAG00000020583)	ENSUMAG00000020572	CYP2D6 (ENSUMAG00000020458)
Giant Panda	MODERN SPECIES	6	ENSAMEG00000024588	EP300 (ENSAMEG00000013940)	ENSAMEG00000031394	L3MBTL2 (ENSAMEG00000014010) #10	CHADL (ENSAMEG00000014053) #11	RANGAP1 (ENSAMEG00000014068) #13	ZC3H7B (ENSAMEG00000002171) #14	TEF (ENSAMEG00000027518) #15	TOB2 (ENSAMEG00000018561)	PHF5A (ENSAMEG00000015687) #16	ACO2 (ENSAMEG00000015641) #17	POLR3H (ENSAMEG00000015630) #18	CSDC2 (ENSAMEG00000015626) #19	PMM1 (ENSAMEG00000015609) #20	DESI1 (ENSAMEG00000015602) #21	XRCC6 (ENSAMEG00000015579) #22	SNU13 (ENSAMEG00000015574) #23	ENSAMEG00000030983	MEI1 (ENSAMEG00000015554) #24	ENSAMEG00000027124	CCDC134 (ENSAMEG00000015542) #25	SREBF2 (ENSAMEG00000015506) #27	CENPM (ENSAMEG00000009365) #31	SMIM45 (ENSAMEG00000019956) #32	SEPTIN3 (ENSAMEG00000009380) #34	WBP2NL (ENSAMEG00000009402) #35	NAGA (ENSAMEG00000009404) #36	PHETA2 (ENSAMEG00000019957)	SMDT1 (ENSAMEG00000009427)	NDUFA6 (ENSAMEG00000009428)	ENSAMEG00000009436
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764
Ferret	MODERN SPECIES	324	EP300 (ENSMPUG00000016427)	L3MBTL2 (ENSMPUG00000016425) #10	CHADL (ENSMPUG00000016416) #11	ENSMPUG00000016414	RANGAP1 (ENSMPUG00000016411) #13	ZC3H7B (ENSMPUG00000016409) #14	TEF (ENSMPUG00000016407) #15	TOB2 (ENSMPUG00000019594)	PHF5A (ENSMPUG00000016398) #16	ACO2 (ENSMPUG00000016396) #17	POLR3H (ENSMPUG00000016395) #18	CSDC2 (ENSMPUG00000016392) #19	PMM1 (ENSMPUG00000016390) #20	DESI1 (ENSMPUG00000016385) #21	SNU13 (ENSMPUG00000016384) #23	XRCC6 (ENSMPUG00000016382) #22	ENSMPUG00000016380	MEI1 (ENSMPUG00000016379) #24	CCDC134 (ENSMPUG00000016378) #25	ENSMPUG00000016377 #28	SREBF2 (ENSMPUG00000016372) #27	TNFRSF13C (ENSMPUG00000016366) #29	CENPM (ENSMPUG00000016361) #31	ENSMPUG00000016339 #34	WBP2NL (ENSMPUG00000016336) #35	NAGA (ENSMPUG00000016335) #36	PHETA2 (ENSMPUG00000019592)	NDUFA6 (ENSMPUG00000016333)	ENSMPUG00000016331	CYP2D6 (ENSMPUG00000016330)	TCF20 (ENSMPUG00000016327)
American mink	MODERN SPECIES	105	XPNPEP3 (ENSNVIG00000000649)	RBX1 (ENSNVIG00000000637)	EP300 (ENSNVIG00000000593)	L3MBTL2 (ENSNVIG00000000543) #10	CHADL (ENSNVIG00000000532) #11	RANGAP1 (ENSNVIG00000000510) #13	ZC3H7B (ENSNVIG00000000487) #14	TEF (ENSNVIG00000000478) #15	TOB2 (ENSNVIG00000000471)	PHF5A (ENSNVIG00000000451) #16	ACO2 (ENSNVIG00000000421) #17	RPC8 (ENSNVIG00000000359) #18	CSDC2 (ENSNVIG00000000351) #19	PMM1 (ENSNVIG00000000343) #20	DESI1 (ENSNVIG00000000338) #21	XRCC6 (ENSNVIG00000000144) #22	SNU13 (ENSNVIG00000000081) #23	ENSNVIG00000000049	MEI1 (ENSNVIG00000022357) #24	CC134 (ENSNVIG00000022338) #25	SREBF2 (ENSNVIG00000022327) #27	TNFRSF13C (ENSNVIG00000022314) #29	CENPM (ENSNVIG00000022296) #31	SMIM45 (ENSNVIG00000022293) #32	ENSNVIG00000022271 #34	WBP2NL (ENSNVIG00000022256) #35	NAGA (ENSNVIG00000022245) #36	PHETA2 (ENSNVIG00000022242)	SMDT1 (ENSNVIG00000022236)	NDUFA6 (ENSNVIG00000022214)	CYP2D6 (ENSNVIG00000022155)
Canidae	ANCESTRAL SPECIES	10	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339.j #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Red fox	DUPLICATION
Red fox	DUPLICATION
Red fox	MODERN SPECIES	42	UGCG (ENSVVUG00000001874)	SHOC1 (ENSVVUG00000001680)	DNAJC25 (ENSVVUG00000001632)	PTGR1 (ENSVVUG00000001596)	ZNF483 (ENSVVUG00000001589)	ECPAS (ENSVVUG00000000339)	ENSVVUG00000028844	LPAR1 (ENSVVUG00000028841)	MUSK (ENSVVUG00000028836)	TXNDC8 (ENSVVUG00000028833)	TXN (ENSVVUG00000028831)	CUNH9orf152 (ENSVVUG00000028830)	PALM2AKAP2 (ENSVVUG00000028829)	ENSVVUG00000028827	ENSVVUG00000028825	ENSVVUG00000028824 #22	PTPN3 (ENSVVUG00000028561)	EPB41L4B (ENSVVUG00000028376)	ENSVVUG00000028364	ENSVVUG00000028353	ENSVVUG00000028349	ENSVVUG00000028348	ENSVVUG00000028337	ELP1 (ENSVVUG00000027495)	ACTL7A (ENSVVUG00000027420)	ACTL7B (ENSVVUG00000027419)	KLF4 (ENSVVUG00000027384)	RAD23B (ENSVVUG00000027357)	ZNF462 (ENSVVUG00000027344)	TMEM38B (ENSVVUG00000027339)	ENSVVUG00000027338
Red fox	MODERN SPECIES	134	XPNPEP3 (ENSVVUG00000006901)	RBX1 (ENSVVUG00000006879)	EP300 (ENSVVUG00000003883)	L3MBTL2 (ENSVVUG00000003709) #10	CHADL (ENSVVUG00000003700) #11	RANGAP1 (ENSVVUG00000003690) #13	ZC3H7B (ENSVVUG00000003660) #14	TEF (ENSVVUG00000003655) #15	TOB2 (ENSVVUG00000003649)	PHF5A (ENSVVUG00000003634) #16	ACO2 (ENSVVUG00000003619) #17	POLR3H (ENSVVUG00000003543) #18	CSDC2 (ENSVVUG00000003532) #19	PMM1 (ENSVVUG00000003525) #20	DESI1 (ENSVVUG00000003501) #21	ENSVVUG00000003442 #22	ENSVVUG00000003430 #23	ENSVVUG00000003422	MEI1 (ENSVVUG00000003315) #24	CCDC134 (ENSVVUG00000003274) #25	SREBF2 (ENSVVUG00000003079) #27	CENPM (ENSVVUG00000003050) #31	SMIM45 (ENSVVUG00000003047) #32	ENSVVUG00000003040	SEPT3 (ENSVVUG00000002589) #34	WBP2NL (ENSVVUG00000002508) #35	NAGA (ENSVVUG00000002502) #36	PHETA2 (ENSVVUG00000002493)	SMDT1 (ENSVVUG00000002486)	NDUFA6 (ENSVVUG00000002468)	CYP2D6 (ENSVVUG00000002453)
Red fox	MODERN SPECIES	139							DACH1 (ENSVVUG00000017901)	ENSVVUG00000018078	BORA (ENSVVUG00000018084)	DIS3 (ENSVVUG00000018095)	PIBF1 (ENSVVUG00000018118)	KLF12 (ENSVVUG00000018151)	ENSVVUG00000018154	TBC1D4 (ENSVVUG00000018161)	ENSVVUG00000018175	ENSVVUG00000018177 #22	UCHL3 (ENSVVUG00000018178)	LMO7 (ENSVVUG00000018188)	KCTD12 (ENSVVUG00000018222)	ACOD1 (ENSVVUG00000018225)	CLN5 (ENSVVUG00000018238)	FBXL3 (ENSVVUG00000018242)	ENSVVUG00000018247
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339.j #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00950000183198.c.b.a.u	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489
Dingo	MODERN SPECIES	307	ENSCAFG00020002075	ENSCAFG00020002042	L3MBTL2 (ENSCAFG00020002034) #10	CHADL (ENSCAFG00020002027) #11	RANGAP1 (ENSCAFG00020002019) #13	ZC3H7B (ENSCAFG00020002005) #14	TEF (ENSCAFG00020001995) #15	TOB2 (ENSCAFG00020001990)	PHF5A (ENSCAFG00020001984) #16	ACO2 (ENSCAFG00020001976) #17	POLR3H (ENSCAFG00020001964) #18	CSDC2 (ENSCAFG00020001951) #19	PMM1 (ENSCAFG00020001948) #20	ENSCAFG00020001943	DESI1 (ENSCAFG00020001937) #21	XRCC6 (ENSCAFG00020001627) #22	ENSCAFG00020001539 #23	ENSCAFG00020001537	MEI1 (ENSCAFG00020001461) #24	CCDC134 (ENSCAFG00020001443) #25	SREBF2 (ENSCAFG00020000981) #27	SHISA8 (ENSCAFG00020000935) #28	TNFRSF13C (ENSCAFG00020000909) #29	CENPM (ENSCAFG00020000905) #31	SMIM45 (ENSCAFG00020000900) #32	ENSCAFG00020000897	ENSCAFG00020000881 #34	ENSCAFG00020000874 #34	WBP2NL (ENSCAFG00020000849) #35	NAGA (ENSCAFG00020000842) #36	PHETA2 (ENSCAFG00020000836)
Dog	MODERN SPECIES	1	ST13 (ENSCAFG00845019349)	XPNPEP3 (ENSCAFG00845019212)	RBX1 (ENSCAFG00845019033)	EP300 (ENSCAFG00845018383)	L3MBTL2 (ENSCAFG00845017974) #10	RANGAP1 (ENSCAFG00845017556) #13	ZC3H7B (ENSCAFG00845017344) #14	TEF (ENSCAFG00845017239) #15	TOB2 (ENSCAFG00845017159)	PHF5A (ENSCAFG00845017076) #16	ACO2 (ENSCAFG00845016969) #17	POLR3H (ENSCAFG00845016808) #18	CSDC2 (ENSCAFG00845016721) #19	PMM1 (ENSCAFG00845016625) #20	ENSCAFG00845016514 #21	XRCC6 (ENSCAFG00845016282) #22	SNU13 (ENSCAFG00845016061) #23	ENSCAFG00845016016	MEI1 (ENSCAFG00845015865) #24	CCDC134 (ENSCAFG00845015779) #25	SREBF2 (ENSCAFG00845015666) #27	SHISA8 (ENSCAFG00845015600) #28	TNFRSF13C (ENSCAFG00845015566) #29	CENPM (ENSCAFG00845015528) #31	SEPTIN3 (ENSCAFG00845015350) #34	WBP2NL (ENSCAFG00845015255) #35	NAGA (ENSCAFG00845015153) #36	PHETA2 (ENSCAFG00845015096)	SMDT1 (ENSCAFG00845015069)	NDUFA6 (ENSCAFG00845015040)	ENSCAFG00845015015
Felidae	ANCESTRAL SPECIES	2	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Panthera	ANCESTRAL SPECIES		ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
lion	MODERN SPECIES	7	ENSPLOG00000011428	RBX1 (ENSPLOG00000011457)	EP300 (ENSPLOG00000011519)	L3MBTL2 (ENSPLOG00000011847) #10	CHADL (ENSPLOG00000012009) #11	RANGAP1 (ENSPLOG00000012100) #13	ZC3H7B (ENSPLOG00000012165) #14	TEF (ENSPLOG00000012484) #15	TOB2 (ENSPLOG00000012540)	PHF5A (ENSPLOG00000012553) #16	ACO2 (ENSPLOG00000012601) #17	POLR3H (ENSPLOG00000012763) #18	CSDC2 (ENSPLOG00000012880) #19	PMM1 (ENSPLOG00000012988) #20	DESI1 (ENSPLOG00000013041) #21	XRCC6 (ENSPLOG00000013139) #22	ENSPLOG00000013318 #23	ENSPLOG00000013474	MEI1 (ENSPLOG00000013509) #24	CCDC134 (ENSPLOG00000013853) #25	SREBF2 (ENSPLOG00000013979) #27	SHISA8 (ENSPLOG00000014038) #28	TNFRSF13C (ENSPLOG00000014150) #29	CENPM (ENSPLOG00000014229) #31	SMIM45 (ENSPLOG00000014284) #32	ENSPLOG00000014331 #34	ENSPLOG00000014680 #35	NAGA (ENSPLOG00000014772) #36	PHETA2 (ENSPLOG00000014836)	SMDT1 (ENSPLOG00000014851)	NDUFA6 (ENSPLOG00000014890)
leopard	MODERN SPECIES	13	RBX1 (ENSPPRG00000010370)	EP300 (ENSPPRG00000009984)	L3MBTL2 (ENSPPRG00000007633) #10	CHADL (ENSPPRG00000007361) #11	RANGAP1 (ENSPPRG00000007346) #13	ZC3H7B (ENSPPRG00000006647) #14	TEF (ENSPPRG00000006357) #15	ENSPPRG00000006258	TOB2 (ENSPPRG00000021427)	PHF5A (ENSPPRG00000006194) #16	ACO2 (ENSPPRG00000005996) #17	POLR3H (ENSPPRG00000005361) #18	CSDC2 (ENSPPRG00000005049) #19	PMM1 (ENSPPRG00000004746) #20	DESI1 (ENSPPRG00000004562) #21	XRCC6 (ENSPPRG00000004390) #22	SNU13 (ENSPPRG00000004114) #23	ENSPPRG00000003751	MEI1 (ENSPPRG00000003624) #24	ENSPPRG00000003373	CCDC134 (ENSPPRG00000003261) #25	SREBF2 (ENSPPRG00000002884) #27	SHISA8 (ENSPPRG00000002601) #28	TNFRSF13C (ENSPPRG00000002529) #29	CENPM (ENSPPRG00000002403) #31	SMIM45 (ENSPPRG00000021195) #32	ENSPPRG00000002117 #34	WBP2NL (ENSPPRG00000001885) #35	NAGA (ENSPPRG00000001659) #36	PHETA2 (ENSPPRG00000021140)	SMDT1 (ENSPPRG00000001619)
Tiger	MODERN SPECIES	130	ST13 (ENSPTIG00000015971)	XPNPEP3 (ENSPTIG00000018765)	ENSPTIG00000003092	RBX1 (ENSPTIG00000020939)	EP300 (ENSPTIG00000021151)	L3MBTL2 (ENSPTIG00000010861) #10	RANGAP1 (ENSPTIG00000012387) #13	ZC3H7B (ENSPTIG00000013113) #14	TEF (ENSPTIG00000013705) #15	TOB2 (ENSPTIG00000004228)	PHF5A (ENSPTIG00000014228) #16	ACO2 (ENSPTIG00000014744) #17	POLR3H (ENSPTIG00000016286) #18	CSDC2 (ENSPTIG00000017894) #19	PMM1 (ENSPTIG00000018216) #20	XRCC6 (ENSPTIG00000019026) #22	DESI1 (ENSPTIG00000020182) #21	SNU13 (ENSPTIG00000021078) #23	ENSPTIG00000021403	MEI1 (ENSPTIG00000021687) #24	CCDC134 (ENSPTIG00000003009) #25	SREBF2 (ENSPTIG00000006504) #27	ENSPTIG00000008224 #29	CENPM (ENSPTIG00000009368) #31	SMIM45 (ENSPTIG00000011104) #32	ENSPTIG00000011548 #34	WBP2NL (ENSPTIG00000013168) #35	NAGA (ENSPTIG00000013994) #36	PHETA2 (ENSPTIG00000004878)	SMDT1 (ENSPTIG00000015252)	NDUFA6 (ENSPTIG00000015981)
Cat	MODERN SPECIES	238	RBX1 (ENSFCAG00000032024)	EP300 (ENSFCAG00000005002)	ENSFCAG00000026993	L3MBTL2 (ENSFCAG00000003668) #10	CHADL (ENSFCAG00000042374) #11	RANGAP1 (ENSFCAG00000003669) #13	ZC3H7B (ENSFCAG00000003670) #14	TEF (ENSFCAG00000032491) #15	TOB2 (ENSFCAG00000003675)	PHF5A (ENSFCAG00000003676) #16	ACO2 (ENSFCAG00000018526) #17	POLR3H (ENSFCAG00000006684) #18	CSDC2 (ENSFCAG00000038283) #19	PMM1 (ENSFCAG00000006685) #20	DESI1 (ENSFCAG00000033281) #21	XRCC6 (ENSFCAG00000018784) #22	SNU13 (ENSFCAG00000027664) #23	ENSFCAG00000025013	MEI1 (ENSFCAG00000014285) #24	CCDC134 (ENSFCAG00000037479) #25	SREBF2 (ENSFCAG00000014289) #27	SHISA8 (ENSFCAG00000029558) #28	TNFRSF13C (ENSFCAG00000025989) #29	CENPM (ENSFCAG00000031560) #31	SMIM45 (ENSFCAG00000032859) #32	SEPTIN3 (ENSFCAG00000000889) #34	WBP2NL (ENSFCAG00000031385) #35	NAGA (ENSFCAG00000001451) #36	PHETA2 (ENSFCAG00000027697)	SMDT1 (ENSFCAG00000000892)	NDUFA6 (ENSFCAG00000025921)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Equus	ANCESTRAL SPECIES	21	ENSGT00940000163470	ENSGT00940000168153	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.z ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Donkey	MODERN SPECIES	11	DNAJB7 (ENSEASG00005027112)	XPNPEP3 (ENSEASG00005001716)	ENSEASG00005024494	EP300 (ENSEASG00005001674)	L3MBTL2 (ENSEASG00005001665) #10	CHADL (ENSEASG00005001659) #11	RANGAP1 (ENSEASG00005001602) #13	ZC3H7B (ENSEASG00005001577) #14	TEF (ENSEASG00005001571) #15	TOB2 (ENSEASG00005031738)	ACO2 (ENSEASG00005001546) #17	POLR3H (ENSEASG00005001539) #18	CSDC2 (ENSEASG00005031038) #19	PMM1 (ENSEASG00005001528) #20	DESI1 (ENSEASG00005034212) #21	XRCC6 (ENSEASG00005001514) #22	ENSEASG00005036377 ##23	ENSEASG00005035516	MEI1 (ENSEASG00005001488) #24	CCDC134 (ENSEASG00005001482) #25	SREBF2 (ENSEASG00005001390) #27	SHISA8 (ENSEASG00005001339) #28	TNFRSF13C (ENSEASG00005027896) #29	CENPM (ENSEASG00005001323) #31	ENSEASG00005001317 #32	SEPTIN3 (ENSEASG00005001015) #34	WBP2NL (ENSEASG00005027774) #35	NAGA (ENSEASG00005000986) #36	PHETA2 (ENSEASG00005033621)	ENSEASG00005037370	ENSEASG00005024363
Horse	MODERN SPECIES	20	DNAJB7 (ENSECAG00000050931)	RBX1 (ENSECAG00000021493)	EP300 (ENSECAG00000009327)	L3MBTL2 (ENSECAG00000010476) #10	CHADL (ENSECAG00000023119) #11	RANGAP1 (ENSECAG00000024092) #13	ZC3H7B (ENSECAG00000010103) #14	TEF (ENSECAG00000018137) #15	TOB2 (ENSECAG00000001192)	ACO2 (ENSECAG00000023762) #17	PHF5A (ENSECAG00000023225) #16	POLR3H (ENSECAG00000019715) #18	CSDC2 (ENSECAG00000022234) #19	PMM1 (ENSECAG00000000302) #20	DESI1 (ENSECAG00000011960) #21	XRCC6 (ENSECAG00000017563) #22	SNU13 (ENSECAG00000000375) ##23	ENSECAG00000055209	MEI1 (ENSECAG00000000597) #24	CCDC134 (ENSECAG00000020771) #25	SREBF2 (ENSECAG00000024608) #27	SHISA8 (ENSECAG00000031350) #28	TNFRSF13C (ENSECAG00000031107) #29	CENPM (ENSECAG00000022914) #31	ENSECAG00000039021 #32	SEPTIN3 (ENSECAG00000023601) #34	NAGA (ENSECAG00000011376) #36	ENSECAG00000049904	PHETA2 (ENSECAG00000022098)	NDUFA6 (ENSECAG00000022520)	ENSECAG00000052538
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Megabat	MODERN SPECIES	3649							ZC3H7B (ENSPVAG00000001159) #14	TEF (ENSPVAG00000001160) #15	TOB2 (ENSPVAG00000001161)	PHF5A (ENSPVAG00000001162) #16	ACO2 (ENSPVAG00000001163) #17	POLR3H (ENSPVAG00000001164) #18	CSDC2 (ENSPVAG00000001165) #19	PMM1 (ENSPVAG00000001166) #20	DESI1 (ENSPVAG00000001167) #21	XRCC6 (ENSPVAG00000001168) #22	SNU13 (ENSPVAG00000001171) #23	MEI1 (ENSPVAG00000001174) #24	CCDC134 (ENSPVAG00000001176) #25	SREBF2 (ENSPVAG00000001177) #27	ENSPVAG00000001183	TNFRSF13C (ENSPVAG00000001186) #29	CENPM (ENSPVAG00000001188) #31	ENSPVAG00000001189	ENSPVAG00000001191 #34	WBP2NL (ENSPVAG00000001192) #35	NAGA (ENSPVAG00000001193) #36	PHETA2 (ENSPVAG00000001194)	SMDT1 (ENSPVAG00000001195)	NDUFA6 (ENSPVAG00000001196)	CYP2D6 (ENSPVAG00000001197)
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Greater horseshoe bat	MODERN SPECIES	1	XPNPEP3 (ENSRFEG00010018976)	ENSRFEG00010018938	EP300 (ENSRFEG00010018626)	L3MBTL2 (ENSRFEG00010018570) #10	CHADL (ENSRFEG00010018530) #11	RANGAP1 (ENSRFEG00010018251) #13	ZC3H7B (ENSRFEG00010018168) #14	TEF (ENSRFEG00010018137) #15	TOB2 (ENSRFEG00010018126)	PHF5A (ENSRFEG00010018076) #16	ACO2 (ENSRFEG00010017740) #17	POLR3H (ENSRFEG00010017658) #18	CSDC2 (ENSRFEG00010017619) #19	PMM1 (ENSRFEG00010017564) #20	DESI1 (ENSRFEG00010017478) #21	XRCC6 (ENSRFEG00010017302) #22	SNU13 (ENSRFEG00010017169) #23	MEI1 (ENSRFEG00010016537) #24	CCDC134 (ENSRFEG00010016458) #25	SREBF2 (ENSRFEG00010016385) #27	SHISA8 (ENSRFEG00010016301) #28	TNFRSF13C (ENSRFEG00010016267) #29	CENPM (ENSRFEG00010016155) #31	ENSRFEG00010016124 #32	SEPTIN3 (ENSRFEG00010015713) #34	ENSRFEG00010015682 #35	NAGA (ENSRFEG00010015637) #36	PHETA2 (ENSRFEG00010015616)	SMDT1 (ENSRFEG00010015560)	NDUFA6 (ENSRFEG00010015451)	CYP2D6 (ENSRFEG00010014956)
Microbat	MODERN SPECIES	1176	ENSMLUG00000007815	ENSMLUG00000027424	EP300 (ENSMLUG00000014810)	L3MBTL2 (ENSMLUG00000008858) #10	CHADL (ENSMLUG00000008892) #11	RANGAP1 (ENSMLUG00000008908) #13	ZC3H7B (ENSMLUG00000003292) #14	TEF (ENSMLUG00000002459) #15	TOB2 (ENSMLUG00000002462)	PHF5A (ENSMLUG00000002465) #16	ACO2 (ENSMLUG00000002472) #17	POLR3H (ENSMLUG00000002487) #18	CSDC2 (ENSMLUG00000002495) #19	PMM1 (ENSMLUG00000002503) #20	DESI1 (ENSMLUG00000002511) #21	XRCC6 (ENSMLUG00000002516) #22	SNU13 (ENSMLUG00000002526) #23	ENSMLUG00000023695	ENSMLUG00000026652	ENSMLUG00000027511	MEI1 (ENSMLUG00000002527) #24	CCDC134 (ENSMLUG00000002544) #25	SREBF2 (ENSMLUG00000002549) #27	CENPM (ENSMLUG00000002564) #31	SMIM45 (ENSMLUG00000029274) #32	ENSMLUG00000002571 #34	WBP2NL (ENSMLUG00000013399) #35	NAGA (ENSMLUG00000012884) #36	PHETA2 (ENSMLUG00000022512)	ENSMLUG00000000560	NDUFA6 (ENSMLUG00000000556)
Atlantogenata	ANCESTRAL SPECIES	36	ENSGT00940000168153	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00550000074840.z ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00940000158004 #34	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764
Xenarthra	ANCESTRAL SPECIES	81	ENSGT00390000001347	ENSGT00940000163470	ENSGT00940000153657.A	ENSGT00940000168153	ENSGT00940000153840.a.b #10	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.y.b #23	ENSGT00550000074840.y.a ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00940000154485.A #29
Armadillo	MODERN SPECIES	4707	ENSDNOG00000046244	DNAJB7 (ENSDNOG00000040305)	XPNPEP3 (ENSDNOG00000046084)	ENSDNOG00000007595	L3MBTL2 (ENSDNOG00000032804) #10	ENSDNOG00000006672 #13	ZC3H7B (ENSDNOG00000007676) #14	TEF (ENSDNOG00000035257) #15	TOB2 (ENSDNOG00000016431)	PHF5A (ENSDNOG00000034362) #16	ACO2 (ENSDNOG00000018156) #17	POLR3H (ENSDNOG00000025527) #18	CSDC2 (ENSDNOG00000013639) #19	PMM1 (ENSDNOG00000036218) #20	DESI1 (ENSDNOG00000040575) #21	XRCC6 (ENSDNOG00000018356) #22	ENSDNOG00000044768 ##23	ENSDNOG00000032337	MEI1 (ENSDNOG00000001581) #24	CCDC134 (ENSDNOG00000001589) #25	SREBF2 (ENSDNOG00000048031) #27	SHISA8 (ENSDNOG00000039236) #28	TNFRSF13C (ENSDNOG00000042940) #29
Sloth	MODERN SPECIES	7146																XRCC6 (ENSCHOG00000004349) #22	SNU13 (ENSCHOG00000004365) #23
Afrotheria	ANCESTRAL SPECIES	33	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.z ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00940000158004 #34	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764	ENSGT00940000153331	ENSGT00940000157896
Afrotheria_a	ANCESTRAL SPECIES	33	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840.z ##23	ENSGT00900000141218	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00940000158004 #34	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00500000045764	ENSGT00940000153331	ENSGT00940000157896
Elephant	DUPLICATION
Elephant	MODERN SPECIES	544	XPNPEP3 (ENSLAFG00000007310)	RBX1 (ENSLAFG00000008795)	EP300 (ENSLAFG00000012289)	L3MBTL2 (ENSLAFG00000012307) #10	CHADL (ENSLAFG00000030376) #11	RANGAP1 (ENSLAFG00000000314) #13	ZC3H7B (ENSLAFG00000013268) #14	TEF (ENSLAFG00000013151) #15	TOB2 (ENSLAFG00000027484)	PHF5A (ENSLAFG00000028840) #16	ACO2 (ENSLAFG00000006030) #17	POLR3H (ENSLAFG00000006033) #18	CSDC2 (ENSLAFG00000027155) #19	PMM1 (ENSLAFG00000002396) #20	DESI1 (ENSLAFG00000029375) #21	ENSLAFG00000011017 #22	SNU13 (ENSLAFG00000011026) ##23	ENSLAFG00000020576	ENSLAFG00000027253	ENSLAFG00000011030 #24	CCDC134 (ENSLAFG00000021498) #25	SREBF2 (ENSLAFG00000005791) #27	TNFRSF13C (ENSLAFG00000029216) #29	CENPM (ENSLAFG00000015711) #31	ENSLAFG00000015724 #34	NAGA (ENSLAFG00000013748) #36	PHETA2 (ENSLAFG00000006869)	SMDT1 (ENSLAFG00000006870)	NDUFA6 (ENSLAFG00000006872)	ENSLAFG00000029829	ENSLAFG00000030928
Elephant	MODERN SPECIES	2	ZNF608 (ENSLAFG00000015124)	CSNK1G3 (ENSLAFG00000007774)	CEP120 (ENSLAFG00000010548)	PRDM6 (ENSLAFG00000000396)	PPIC (ENSLAFG00000012206)	SNX24 (ENSLAFG00000008244)	SNX2 (ENSLAFG00000013015)	SNCAIP (ENSLAFG00000011510)	ENSLAFG00000026326	ENSLAFG00000011621	LOX (ENSLAFG00000015308)	SRFBP1 (ENSLAFG00000015303)	FTMT (ENSLAFG00000028951)	ENSLAFG00000028219	PRR16 (ENSLAFG00000002441)	ENSLAFG00000028710 #22	FAM170A (ENSLAFG00000018269)	HSD17B4 (ENSLAFG00000017053)	TNFAIP8 (ENSLAFG00000008078)	DMXL1 (ENSLAFG00000015811)	DTWD2 (ENSLAFG00000011843)	ENSLAFG00000031957	SEMA6A (ENSLAFG00000004387)	ENSLAFG00000027553	COMMD10 (ENSLAFG00000011885)	ARL14EPL (ENSLAFG00000032735)	LVRN (ENSLAFG00000002068)	ENSLAFG00000015311	ATG12 (ENSLAFG00000015307)	CDO1 (ENSLAFG00000015304)	TMED7 (ENSLAFG00000032184)
Hyrax	MODERN SPECIES	5564													CSDC2 (ENSPCAG00000014857) #19	PMM1 (ENSPCAG00000014873) #20	DESI1 (ENSPCAG00000014934) #21	XRCC6 (ENSPCAG00000014962) #22
Tenrec	MODERN SPECIES	8010																ENSETEG00000015333 #22	SNU13 (ENSETEG00000015335) ##23
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489.e	ENSGT00390000018898	ENSGT00500000045764	ENSGT00940000153331
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b.b #11	ENSGT00940000154464.b.a #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489.e	ENSGT00390000018898	ENSGT00500000045764	ENSGT00940000153331
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b.b #11	ENSGT00940000154464.b.a #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b.m #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489.e	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b.b #11	ENSGT00940000154464.b.a #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b.m #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163233 #28	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489.e	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
koala	MODERN SPECIES	13	EP300 (ENSPCIG00000026468)	ENSPCIG00000036488	L3MBTL2 (ENSPCIG00000026428) #10	ENSPCIG00000026427 #11	ENSPCIG00000036708 #11	RANGAP1 (ENSPCIG00000026423) #13	ZC3H7B (ENSPCIG00000026417) #14	TEF (ENSPCIG00000026531) #15	TOB2 (ENSPCIG00000026533)	PHF5A (ENSPCIG00000031450) #16	ACO2 (ENSPCIG00000026414) #17	POLR3H (ENSPCIG00000026413) #18	CSDC2 (ENSPCIG00000033418) #19	PMM1 (ENSPCIG00000026411) #20	DESI1 (ENSPCIG00000026410) #21	XRCC6 (ENSPCIG00000026409) #22	SNU13 (ENSPCIG00000026408) #23	ENSPCIG00000026407	MEI1 (ENSPCIG00000026405) #24	CCDC134 (ENSPCIG00000026402) #25	SREBF2 (ENSPCIG00000026401) #27	ENSPCIG00000026400 #28	ENSPCIG00000022537	CENPM (ENSPCIG00000005701) #31	ENSPCIG00000004039 #34	ENSPCIG00000006132 #35	NAGA (ENSPCIG00000022807) #36	PHETA2 (ENSPCIG00000022802)	SMDT1 (ENSPCIG00000022794)	ENSPCIG00000022790	ENSPCIG00000026203
Common wonbat	MODERN SPECIES	135	RBX1 (ENSVURG00010002126)	EP300 (ENSVURG00010002025)	L3MBTL2 (ENSVURG00010001993) #10	ENSVURG00010001987 #11	ENSVURG00010001895 #11	RANGAP1 (ENSVURG00010001814) #13	ZC3H7B (ENSVURG00010001772) #14	TEF (ENSVURG00010001759) #15	TOB2 (ENSVURG00010001752)	PHF5A (ENSVURG00010001740) #16	ACO2 (ENSVURG00010001726) #17	POLR3H (ENSVURG00010001680) #18	CSDC2 (ENSVURG00010001672) #19	ENSVURG00010001642 #20	DESI1 (ENSVURG00010001632) #21	XRCC6 (ENSVURG00010001619) #22	ENSVURG00010001607 #23	MEI1 (ENSVURG00010001558) #24	CCDC134 (ENSVURG00010001519) #25	SREBF2 (ENSVURG00010001443) #27	CENPM (ENSVURG00010001417) #31	SMIM45 (ENSVURG00010001403) #32	ENSVURG00010001361 #34	ENSVURG00010001344 #35	NAGA (ENSVURG00010001323) #36	SMDT1 (ENSVURG00010001310)	ENSVURG00010001290
Tasmanian devil	MODERN SPECIES	4	ENSSHAG00000024914	EP300 (ENSSHAG00000006684)	L3MBTL2 (ENSSHAG00000025122) #10	ENSSHAG00000007840 #11	ENSSHAG00000008085 #11	RANGAP1 (ENSSHAG00000008179) #13	ZC3H7B (ENSSHAG00000008653) #14	TEF (ENSSHAG00000020958) #15	TOB2 (ENSSHAG00000030650)	PHF5A (ENSSHAG00000025116) #16	ACO2 (ENSSHAG00000010092) #17	POLR3H (ENSSHAG00000010196) #18	CSDC2 (ENSSHAG00000029872) #19	PMM1 (ENSSHAG00000025713) #20	DESI1 (ENSSHAG00000029515) #21	XRCC6 (ENSSHAG00000010790) #22	ENSSHAG00000024404	MEI1 (ENSSHAG00000011079) #24	ENSSHAG00000024514 #25	SREBF2 (ENSSHAG00000011682) #27	SHISA8 (ENSSHAG00000032342) #28	CENPM (ENSSHAG00000028188) #31	ENSSHAG00000012446 #34	ENSSHAG00000030112 #35	PHETA2 (ENSSHAG00000027807)	NDUFA6 (ENSSHAG00000027125)	ENSSHAG00000012743	ENSSHAG00000021522	TCF20 (ENSSHAG00000012959)	ENSSHAG00000026375	ENSSHAG00000031424
Opossum	MODERN SPECIES	361							ENSMODG00000016546 #14	TEF (ENSMODG00000016547) #15	ENSMODG00000016552	PHF5A (ENSMODG00000016556) #16	ACO2 (ENSMODG00000016560) #17	POLR3H (ENSMODG00000016563) #18	CSDC2 (ENSMODG00000016565) #19	PMM1 (ENSMODG00000016574) #20	DESI1 (ENSMODG00000016577) #21	XRCC6 (ENSMODG00000016589) #22	ENSMODG00000016592 #23	MEI1 (ENSMODG00000016599) #24	ENSMODG00000038878 #25	SREBF2 (ENSMODG00000016612) #27
Platypus	MODERN SPECIES	5	XPNPEP3 (ENSOANG00000014678)	RBX1 (ENSOANG00000014675)	EP300 (ENSOANG00000014679)	L3MBTL2 (ENSOANG00000013943) #10	CHADL (ENSOANG00000036728) #11	RANGAP1 (ENSOANG00000013941) #13	ZC3H7B (ENSOANG00000008962) #14	TEF (ENSOANG00000011535) #15	ENSOANG00000009031	PHF5A (ENSOANG00000044295) #16	ACO2 (ENSOANG00000003550) #17	POLR3H (ENSOANG00000004374) #18	CSDC2 (ENSOANG00000004309) #19	PMM1 (ENSOANG00000050238) #20	DESI1 (ENSOANG00000044638) #21	XRCC6 (ENSOANG00000011328) #22	SNU13 (ENSOANG00000011327) #23	MEI1 (ENSOANG00000004117) #24	ENSOANG00000042179 #25	SREBF2 (ENSOANG00000002461) #27	ENSOANG00000004529 #28	ENSOANG00000044226 #31	SMIM45 (ENSOANG00000004246) #32	ENSOANG00000004244 #34	ENSOANG00000036436 #35	NAGA (ENSOANG00000004242) #36	ENSOANG00000004241	SMDT1 (ENSOANG00000002673)	NDUFA6 (ENSOANG00000004240)	CYP2D6 (ENSOANG00000004239)	TCF20 (ENSOANG00000049101)
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000001347.r	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00390000001347.r	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Elapidae	ANCESTRAL SPECIES	6	ENSGT00390000001347.r	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339.a #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000157896	ENSGT00390000018482
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00390000001347.r	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339.a #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000157896	ENSGT00390000018482
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00390000001347.r	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339.a #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000157896	ENSGT00390000018482
Eastern brown snake	MODERN SPECIES		XPNPEP3 (ENSPTXG00000001583)	RBX1 (ENSPTXG00000001586)	EP300 (ENSPTXG00000001636)	L3MBTL2 (ENSPTXG00000001671) #10	CHADL (ENSPTXG00000001681) #11	RANGAP1 (ENSPTXG00000001684) #13	ZC3H7B (ENSPTXG00000001686) #14	ENSPTXG00000001688	TEF (ENSPTXG00000001690) #15	TOB2 (ENSPTXG00000001691)	PHF5A (ENSPTXG00000001692) #16	ACO2 (ENSPTXG00000001693) #17	CSDC2 (ENSPTXG00000001696) #19	PMM1 (ENSPTXG00000000011) #20	DESI1 (ENSPTXG00000000015) #21	XRCC6 (ENSPTXG00000000018) #22	SNU13 (ENSPTXG00000000028) #23	ENSPTXG00000000049 #24	CCDC134 (ENSPTXG00000000073) #25	SREBF2 (ENSPTXG00000000089) #27	ENSPTXG00000000155	CENPM (ENSPTXG00000000182) #31	SMIM45 (ENSPTXG00000000284) #32	SEPTIN3 (ENSPTXG00000000292) #34	WBP2NL (ENSPTXG00000000364) #35	NAGA (ENSPTXG00000000376) #36	PHETA2 (ENSPTXG00000000394)	SMDT1 (ENSPTXG00000000401)	NDUFA6 (ENSPTXG00000000406)	TCF20 (ENSPTXG00000000413)	RRP7A (ENSPTXG00000000434)
Mainland tiger snake	MODERN SPECIES	6	SLC25A17 (ENSNSUG00000004369)	ENSNSUG00000004350	XPNPEP3 (ENSNSUG00000004342)	RBX1 (ENSNSUG00000004338)	EP300 (ENSNSUG00000004324)	L3MBTL2 (ENSNSUG00000004288) #10	RANGAP1 (ENSNSUG00000003774) #13	ZC3H7B (ENSNSUG00000003755) #14	TEF (ENSNSUG00000003754) #15	TOB2 (ENSNSUG00000003753)	PHF5A (ENSNSUG00000003750) #16	ACO2 (ENSNSUG00000003747) #17	CSDC2 (ENSNSUG00000003745) #19	PMM1 (ENSNSUG00000003714) #20	DESI1 (ENSNSUG00000003709) #21	XRCC6 (ENSNSUG00000003704) #22	SNU13 (ENSNSUG00000003702) #23	ENSNSUG00000003697 #24	CCDC134 (ENSNSUG00000003692) #25	SREBF2 (ENSNSUG00000003621) #27	ENSNSUG00000003617	ENSNSUG00000003613	CENPM (ENSNSUG00000003609) #31	SMIM45 (ENSNSUG00000003608) #32	SEPTIN3 (ENSNSUG00000003603) #34	WBP2NL (ENSNSUG00000003570) #35	NAGA (ENSNSUG00000003563) #36	PHETA2 (ENSNSUG00000003562)	SMDT1 (ENSNSUG00000003561)	NDUFA6 (ENSNSUG00000003559)	ENSNSUG00000003551
Blue-lipped sea krait	MODERN SPECIES	2068																XRCC6 (ENSLLTG00000001065) #22	SNU13 (ENSLLTG00000001083) #23
Indian cobra	MODERN SPECIES	6	ENSNNAG00000004788	XPNPEP3 (ENSNNAG00000004765)	RBX1 (ENSNNAG00000004745)	EP300 (ENSNNAG00000004664)	L3MBTL2 (ENSNNAG00000004623) #10	ENSNNAG00000004605 #13	ENSNNAG00000004583 #13	ZC3H7B (ENSNNAG00000004566) #14	TEF (ENSNNAG00000004545) #15	TOB2 (ENSNNAG00000004539)	PHF5A (ENSNNAG00000004530) #16	ACO2 (ENSNNAG00000004487) #17	CSDC2 (ENSNNAG00000004467) #19	PMM1 (ENSNNAG00000004428) #20	DESI1 (ENSNNAG00000004395) #21	XRCC6 (ENSNNAG00000004359) #22	SNU13 (ENSNNAG00000004338) #23	ENSNNAG00000004288 #24	CCDC134 (ENSNNAG00000004264) #25	SREBF2 (ENSNNAG00000003397) #27	ENSNNAG00000003289	CENPM (ENSNNAG00000003277) #31	SMIM45 (ENSNNAG00000003272) #32	SEPTIN3 (ENSNNAG00000003238) #34	WBP2NL (ENSNNAG00000003214) #35	NAGA (ENSNNAG00000003192) #36	PHETA2 (ENSNNAG00000003177)	SMDT1 (ENSNNAG00000003166)	NDUFA6 (ENSNNAG00000003142)	TCF20 (ENSNNAG00000015954)	RRP7A (ENSNNAG00000015937)
Lizard	MODERN SPECIES	4	ENSACAG00000005227	XPNPEP3 (ENSACAG00000005215)	RBX1 (ENSACAG00000005208)	EP300 (ENSACAG00000005148)	L3MBTL2 (ENSACAG00000005056) #10	ENSACAG00000027273	RANGAP1 (ENSACAG00000004943) #13	ZC3H7B (ENSACAG00000004820) #14	TEF (ENSACAG00000004810) #15	TOB2 (ENSACAG00000004782)	PHF5A (ENSACAG00000004775) #16	ACO2 (ENSACAG00000004677) #17	CSDC2 (ENSACAG00000042839) #19	PMM1 (ENSACAG00000004619) #20	DESI1 (ENSACAG00000004597) #21	XRCC6 (ENSACAG00000004508) #22	SNU13 (ENSACAG00000037043) #23	ENSACAG00000004476 #24	CCDC134 (ENSACAG00000004397) #25	SREBF2 (ENSACAG00000004146) #27	shisa8 (ENSACAG00000040885)	CENPM (ENSACAG00000039773) #31	SMIM45 (ENSACAG00000038314) #32	SEPTIN3 (ENSACAG00000003974) #34	WBP2NL (ENSACAG00000003971) #35	NAGA (ENSACAG00000003939) #36	PHETA2 (ENSACAG00000003936)	SMDT1 (ENSACAG00000003926)	NDUFA6 (ENSACAG00000003916)	ENSACAG00000043515	ENSACAG00000041836
Laterata	ANCESTRAL SPECIES	6	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00940000161826.C	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.h	ENSGT00940000153331.g.b
Common wall lizard	MODERN SPECIES	1	XPNPEP3 (ENSPMRG00000021424)	RBX1 (ENSPMRG00000021419)	EP300 (ENSPMRG00000021378)	ENSPMRG00000020965 #10	CHADL (ENSPMRG00000020900) #11	ENSPMRG00000020893	RANGAP1 (ENSPMRG00000020887) #13	ZC3H7B (ENSPMRG00000020871) #14	TEF (ENSPMRG00000020863) #15	TOB2 (ENSPMRG00000020859)	PHF5A (ENSPMRG00000020857) #16	ACO2 (ENSPMRG00000020422) #17	CSDC2 (ENSPMRG00000020362) #19	PMM1 (ENSPMRG00000020353) #20	DESI1 (ENSPMRG00000020343) #21	XRCC6 (ENSPMRG00000020330) #22	SNU13 (ENSPMRG00000020324) #23	MEI1 (ENSPMRG00000020311) #24	CCDC134 (ENSPMRG00000020301) #25	SREBF2 (ENSPMRG00000020292) #27	ENSPMRG00000020282	ENSPMRG00000020277	ENSPMRG00000020276	ENSPMRG00000020268	CENPM (ENSPMRG00000020262) #31	ENSPMRG00000020252 #32	SEPTIN3 (ENSPMRG00000020243) #34	WBP2NL (ENSPMRG00000020237) #35	NAGA (ENSPMRG00000020231) #36	PHETA2 (ENSPMRG00000020224)	SMDT1 (ENSPMRG00000020222)
Argentine black and white tegu	MODERN SPECIES	6	XPNPEP3 (ENSSMRG00000015573)	RBX1 (ENSSMRG00000015572)	EP300 (ENSSMRG00000015570)	L3MBTL2 (ENSSMRG00000015569) #10	CHADL (ENSSMRG00000015568) #11	ENSSMRG00000015566	RANGAP1 (ENSSMRG00000015363) #13	ZC3H7B (ENSSMRG00000015357) #14	TEF (ENSSMRG00000015355) #15	TOB2 (ENSSMRG00000015352)	PHF5A (ENSSMRG00000015351) #16	ACO2 (ENSSMRG00000015350) #17	CSDC2 (ENSSMRG00000015349) #19	PMM1 (ENSSMRG00000015348) #20	DESI1 (ENSSMRG00000015347) #21	XRCC6 (ENSSMRG00000014777) #22	ENSSMRG00000014776	ENSSMRG00000014775 #24	CCDC134 (ENSSMRG00000014772) #25	SREBF2 (ENSSMRG00000014771) #27	ENSSMRG00000014770	ENSSMRG00000014769 #31	SMIM45 (ENSSMRG00000014768) #32	SEPTIN3 (ENSSMRG00000014767) #34	WBP2NL (ENSSMRG00000014765) #35	NAGA (ENSSMRG00000014764) #36	PHETA2 (ENSSMRG00000014763)	SMDT1 (ENSSMRG00000014762)	NDUFA6 (ENSSMRG00000014761)	ENSSMRG00000014547	ENSSMRG00000014546
tuatara	MODERN SPECIES	1295	XPNPEP3 (ENSSPUG00000011362)	RBX1 (ENSSPUG00000011379)	EP300 (ENSSPUG00000011389)	L3MBTL2 (ENSSPUG00000011413) #10	CHADL (ENSSPUG00000011437) #11	RANGAP1 (ENSSPUG00000011454) #13	ZC3H7B (ENSSPUG00000011490) #14	TEF (ENSSPUG00000011581) #15	PHF5A (ENSSPUG00000011593) #16	ACO2 (ENSSPUG00000011600) #17	POLR3H (ENSSPUG00000011619) #18	CSDC2 (ENSSPUG00000011628) #19	PMM1 (ENSSPUG00000011697) #20	ENSSPUG00000012027	DESI1 (ENSSPUG00000012040) #21	XRCC6 (ENSSPUG00000012086) #22	SNU13 (ENSSPUG00000012098) #23	ENSSPUG00000012111 #24
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Archosauria	ANCESTRAL SPECIES	4	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Aves	ANCESTRAL SPECIES	1	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898
Neognathae	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Anatidae	ANCESTRAL SPECIES	14					ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331	ENSGT00940000157896
Pink-footed goose	MODERN SPECIES	36	MYF5 (ENSABRG00000003896)	LIN7A (ENSABRG00000003928)	ENSABRG00000003943	ENSABRG00000003973	CHADL (ENSABRG00000003979) #11	RANGAP1 (ENSABRG00000004047) #13	ZC3H7B (ENSABRG00000004538) #14	TEF (ENSABRG00000004576) #15	TOB2 (ENSABRG00000004605)	PHF5A (ENSABRG00000004614) #16	ACO2 (ENSABRG00000004640) #17	POLR3H (ENSABRG00000004688) #18	CSDC2 (ENSABRG00000004705) #19	PMM1 (ENSABRG00000004715) #20	DESI1 (ENSABRG00000004740) #21	XRCC6 (ENSABRG00000004750) #22	SNU13 (ENSABRG00000004772) #23	MEI1 (ENSABRG00000004785) #24	CCDC134 (ENSABRG00000004875) #25	SREBF2 (ENSABRG00000004888) #27	ENSABRG00000004906 #29	CENPM (ENSABRG00000004914) #31	SMIM45 (ENSABRG00000004941) #32	SEPTIN3 (ENSABRG00000004946) #34	ENSABRG00000004972	NAGA (ENSABRG00000004984) #36	SMDT1 (ENSABRG00000005015)	NDUFA6 (ENSABRG00000005024)	CYP2D6 (ENSABRG00000005039)	TCF20 (ENSABRG00000005048)	ENSABRG00000005063
Duck	MODERN SPECIES		PTPRQ (ENSAPLG00000016187)	MYF6 (ENSAPLG00000002254)	MYF5 (ENSAPLG00000001124)	ENSAPLG00000001136	LIN7A (ENSAPLG00000017756)	ENSAPLG00000029393	RANGAP1 (ENSAPLG00000006767) #13	ZC3H7B (ENSAPLG00000005880) #14	TEF (ENSAPLG00000005838) #15	TOB2 (ENSAPLG00000023708)	PHF5A (ENSAPLG00000021195) #16	ACO2 (ENSAPLG00000005198) #17	POLR3H (ENSAPLG00000005063) #18	CSDC2 (ENSAPLG00000005057) #19	DESI1 (ENSAPLG00000016507) #21	XRCC6 (ENSAPLG00000004469) #22	SNU13 (ENSAPLG00000001022) #23	ENSAPLG00000030477 #24	ENSAPLG00000003972 #24	ENSAPLG00000020731 #24	CCDC134 (ENSAPLG00000003824) #25	SREBF2 (ENSAPLG00000003145) #27	CENPM (ENSAPLG00000003037) #31	SMIM45 (ENSAPLG00000027486) #32	SEPTIN3 (ENSAPLG00000002801) #34	WBP2NL (ENSAPLG00000007253) #35	NAGA (ENSAPLG00000006939) #36	PHETA2 (ENSAPLG00000028764)	SMDT1 (ENSAPLG00000002343)	NDUFA6 (ENSAPLG00000006912)	CYP2D6 (ENSAPLG00000006049)
Phasianidae	ANCESTRAL SPECIES		ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Chicken	MODERN SPECIES		XPNPEP3 (ENSGALG00010012910)	RBX1 (ENSGALG00010012900)	EP300 (ENSGALG00010012865)	L3MBTL2 (ENSGALG00010012841) #10	CHADL (ENSGALG00010012832) #11	RANGAP1 (ENSGALG00010012819) #13	ZC3H7B (ENSGALG00010012797) #14	TEF (ENSGALG00010012786) #15	TOB2 (ENSGALG00010012747)	PHF5A (ENSGALG00010012765) #16	ACO2 (ENSGALG00010012720) #17	POLR3H (ENSGALG00010010891) #18	CSDC2 (ENSGALG00010010856) #19	PMM1 (ENSGALG00010010841) #20	DESI1 (ENSGALG00010010831) #21	XRCC6 (ENSGALG00010010792) #22	ENSGALG00010010771	MEI1 (ENSGALG00010010761) #24	CCDC134 (ENSGALG00010010740) #25	SREBF2 (ENSGALG00010010706) #27	SHISA8 (ENSGALG00010010680)	TNFRSF13C (ENSGALG00010010672) #29	CENPM (ENSGALG00010010648) #31	SMIM45 (ENSGALG00010009708) #32	SEPTIN3 (ENSGALG00010009995) #34	WBP2NL (ENSGALG00010009948) #35	NAGA (ENSGALG00010009866) #36	PHETA2 (ENSGALG00010009842)	SMDT1 (ENSGALG00010009809)	NDUFA6 (ENSGALG00010009795)	CYP2D6 (ENSGALG00010010061)
Turkey	MODERN SPECIES		XPNPEP3 (ENSMGAG00000012279)	RBX1 (ENSMGAG00000012285)	EP300 (ENSMGAG00000012170)	L3MBTL2 (ENSMGAG00000012189) #10	CHADL (ENSMGAG00000012213) #11	RANGAP1 (ENSMGAG00000012215) #13	ZC3H7B (ENSMGAG00000012234) #14	TEF (ENSMGAG00000012262) #15	TOB2 (ENSMGAG00000015716)	PHF5A (ENSMGAG00000012169) #16	POLR3H (ENSMGAG00000012126) #18	CSDC2 (ENSMGAG00000012131) #19	ENSMGAG00000012110 #17	PMM1 (ENSMGAG00000012134) #20	DESI1 (ENSMGAG00000012139) #21	XRCC6 (ENSMGAG00000012146) #22	SNU13 (ENSMGAG00000012155) #23	MEI1 (ENSMGAG00000012159) #24	CCDC134 (ENSMGAG00000012164) #25	SREBF2 (ENSMGAG00000012074) #27	ENSMGAG00000020447	TNFRSF13C (ENSMGAG00000019790) #29	CENPM (ENSMGAG00000012104) #31	SMIM45 (ENSMGAG00000018986) #32	SEPTIN3 (ENSMGAG00000012105) #34	WBP2NL (ENSMGAG00000012033) #35	NAGA (ENSMGAG00000012043) #36	PHETA2 (ENSMGAG00000015714)	SMDT1 (ENSMGAG00000020728)	NDUFA6 (ENSMGAG00000019653)	CYP2D6 (ENSMGAG00000012053)
Japanese quail	MODERN SPECIES		XPNPEP3 (ENSCJPG00005009357)	RBX1 (ENSCJPG00005009355)	EP300 (ENSCJPG00005009352)	L3MBTL2 (ENSCJPG00005009248) #10	ENSCJPG00005009247	RANGAP1 (ENSCJPG00005009109) #13	ZC3H7B (ENSCJPG00005009108) #14	TEF (ENSCJPG00005009107) #15	TOB2 (ENSCJPG00005009106)	PHF5A (ENSCJPG00005009105) #16	ACO2 (ENSCJPG00005009104) #17	POLR3H (ENSCJPG00005009103) #18	CSDC2 (ENSCJPG00005009102) #19	ENSCJPG00005009101 ##20	DESI1 (ENSCJPG00005009100) #21	XRCC6 (ENSCJPG00005009099) #22	SNU13 (ENSCJPG00005009098) #23	MEI1 (ENSCJPG00005009097) #24	CCDC134 (ENSCJPG00005009096) #25	SREBF2 (ENSCJPG00005009094) #27	ENSCJPG00005009093	ENSCJPG00005009092 #29	CENPM (ENSCJPG00005009091) #31	SMIM45 (ENSCJPG00005009090) #32	SEPTIN3 (ENSCJPG00005009089) #34	WBP2NL (ENSCJPG00005009088) #35	NAGA (ENSCJPG00005009087) #36	PHETA2 (ENSCJPG00005009086)	SMDT1 (ENSCJPG00005009085)	NDUFA6 (ENSCJPG00005009084)	CYP2D6 (ENSCJPG00005009083)
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Neognathae_c	ANCESTRAL SPECIES		ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Golden eagle	MODERN SPECIES	8	XPNPEP3 (ENSACCG00020011272)	RBX1 (ENSACCG00020011253)	EP300 (ENSACCG00020011223)	L3MBTL2 (ENSACCG00020011187) #10	CHADL (ENSACCG00020011167) #11	RANGAP1 (ENSACCG00020011151) #13	ZC3H7B (ENSACCG00020011103) #14	TEF (ENSACCG00020011092) #15	TOB2 (ENSACCG00020011079)	PHF5A (ENSACCG00020011070) #16	ACO2 (ENSACCG00020011045) #17	POLR3H (ENSACCG00020011032) #18	CSDC2 (ENSACCG00020011025) #19	PMM1 (ENSACCG00020010995) #20	DESI1 (ENSACCG00020010985) #21	XRCC6 (ENSACCG00020010932) #22	SNU13 (ENSACCG00020010839) #23	MEI1 (ENSACCG00020010827) #24	CCDC134 (ENSACCG00020010797) #25	SREBF2 (ENSACCG00020010779) #27	ENSACCG00020010760	TNFRSF13C (ENSACCG00020010752) #29	CENPM (ENSACCG00020010738) #31	SMIM45 (ENSACCG00020010728) #32	SEPTIN3 (ENSACCG00020010715) #34	WBP2NL (ENSACCG00020010704) #35	NAGA (ENSACCG00020010696) #36	PHETA2 (ENSACCG00020010685)	SMDT1 (ENSACCG00020010678)	NDUFA6 (ENSACCG00020010666)	CYP2D6 (ENSACCG00020010656)
Kakapo	MODERN SPECIES	20	XPNPEP3 (ENSSHBG00005003788)	RBX1 (ENSSHBG00005003797)	EP300 (ENSSHBG00005003877)	L3MBTL2 (ENSSHBG00005003962) #10	CHADL (ENSSHBG00005003983) #11	RANGAP1 (ENSSHBG00005003995) #13	ZC3H7B (ENSSHBG00005004011) #14	TEF (ENSSHBG00005004030) #15	TOB2 (ENSSHBG00005004039)	PHF5A (ENSSHBG00005004044) #16	ACO2 (ENSSHBG00005004055) #17	POLR3H (ENSSHBG00005004066) #18	CSDC2 (ENSSHBG00005004072) #19	PMM1 (ENSSHBG00005004080) #20	DESI1 (ENSSHBG00005004088) #21	XRCC6 (ENSSHBG00005004097) #22	SNU13 (ENSSHBG00005004108) #23	ENSSHBG00005004117 #24	ENSSHBG00005004126 #24	CCDC134 (ENSSHBG00005004136) #25	SREBF2 (ENSSHBG00005004151) #27	ENSSHBG00005004164	ENSSHBG00005004169	CENPM (ENSSHBG00005004178) #31	SEPTIN3 (ENSSHBG00005004182) #34	WBP2NL (ENSSHBG00005004191) #35	NAGA (ENSSHBG00005004197) #36	PHETA2 (ENSSHBG00005004204)	SMDT1 (ENSSHBG00005004211)	NDUFA6 (ENSSHBG00005004217)	CYP2D6 (ENSSHBG00005004284)
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Great tit	MODERN SPECIES	10	XPNPEP3 (ENSPMJG00000007454)	RBX1 (ENSPMJG00000007453)	EP300 (ENSPMJG00000005447)	L3MBTL2 (ENSPMJG00000005319) #10	CHADL (ENSPMJG00000005316) #11	RANGAP1 (ENSPMJG00000004991) #13	ZC3H7B (ENSPMJG00000004469) #14	TEF (ENSPMJG00000004460) #15	TOB2 (ENSPMJG00000004458)	PHF5A (ENSPMJG00000004457) #16	ACO2 (ENSPMJG00000004344) #17	POLR3H (ENSPMJG00000004341) #18	CSDC2 (ENSPMJG00000004340) #19	PMM1 (ENSPMJG00000003708) #20	DESI1 (ENSPMJG00000003706) #21	XRCC6 (ENSPMJG00000003281) #22	SNU13 (ENSPMJG00000003278) #23	MEI1 (ENSPMJG00000003253) #24	CCDC134 (ENSPMJG00000003161) #25	SREBF2 (ENSPMJG00000003158) #27	ENSPMJG00000003157	ENSPMJG00000003156	CENPM (ENSPMJG00000003154) #31	SMIM45 (ENSPMJG00000003152) #32	SEPTIN3 (ENSPMJG00000003150) #34	WBP2NL (ENSPMJG00000003148) #35	NAGA (ENSPMJG00000003145) #36	PHETA2 (ENSPMJG00000003144)	SMDT1 (ENSPMJG00000003139)	NDUFA6 (ENSPMJG00000003138)	CYP2D6 (ENSPMJG00000003134)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Flycatcher	MODERN SPECIES	10	RBX1 (ENSFALG00000012051)	EP300 (ENSFALG00000012042)	L3MBTL2 (ENSFALG00000012014) #10	CHADL (ENSFALG00000011997) #11	RANGAP1 (ENSFALG00000011980) #13	ZC3H7B (ENSFALG00000011968) #14	TEF (ENSFALG00000011967) #15	TOB2 (ENSFALG00000011965)	PHF5A (ENSFALG00000025716) #16	POLR3H (ENSFALG00000011952) #18	CSDC2 (ENSFALG00000011950) #19	PMM1 (ENSFALG00000029020) #20	ENSFALG00000024026 ##20	ENSFALG00000027725 #21	ENSFALG00000028431 #21	XRCC6 (ENSFALG00000011908) #22	SNU13 (ENSFALG00000028405) #23	MEI1 (ENSFALG00000011849) #24	ENSFALG00000026059 #25	ENSFALG00000011819 #25	ENSFALG00000011957 #17	ENSFALG00000011802	ENSFALG00000011793 #29	CENPM (ENSFALG00000011782) #31	SEPTIN3 (ENSFALG00000011773) #34	ENSFALG00000011811 #27	NAGA (ENSFALG00000011747) #36	PHETA2 (ENSFALG00000023814)	SMDT1 (ENSFALG00000011733)	NDUFA6 (ENSFALG00000027411)	CYP2D6 (ENSFALG00000011675)
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Medium ground finch	MODERN SPECIES	37	XPNPEP3 (ENSGFOG00000005541)	RBX1 (ENSGFOG00000005560)	EP300 (ENSGFOG00000005659)	L3MBTL2 (ENSGFOG00000007896) #10	CHADL (ENSGFOG00000007916) #11	RANGAP1 (ENSGFOG00000007926) #13	ZC3H7B (ENSGFOG00000007942) #14	TEF (ENSGFOG00000007970) #15	TOB2 (ENSGFOG00000007976)	PHF5A (ENSGFOG00000007986) #16	ACO2 (ENSGFOG00000007995) #17	POLR3H (ENSGFOG00000008010) #18	CSDC2 (ENSGFOG00000008013) #19	PMM1 (ENSGFOG00000008019) #20	DESI1 (ENSGFOG00000008027) #21	XRCC6 (ENSGFOG00000008034) #22	SNU13 (ENSGFOG00000008044) #23	ENSGFOG00000008048 #24	ENSGFOG00000008064 #24	SREBF2 (ENSGFOG00000008078) #27	ENSGFOG00000008111 #29	CENPM (ENSGFOG00000008121) #31	SMIM45 (ENSGFOG00000008124) #32	SEPTIN3 (ENSGFOG00000008129) #34	WBP2NL (ENSGFOG00000008136) #35	NAGA (ENSGFOG00000008147) #36	PHETA2 (ENSGFOG00000008152)	SMDT1 (ENSGFOG00000008159)	NDUFA6 (ENSGFOG00000008161)	CYP2D6 (ENSGFOG00000008172)	TCF20 (ENSGFOG00000008284)
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00940000154485.A #29	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331
Zebra finch	MODERN SPECIES	11	ST13 (ENSTGUG00000010046)	XPNPEP3 (ENSTGUG00000010038)	RBX1 (ENSTGUG00000010035)	EP300 (ENSTGUG00000010016)	L3MBTL2 (ENSTGUG00000010000) #10	RANGAP1 (ENSTGUG00000009969) #13	ZC3H7B (ENSTGUG00000009946) #14	TEF (ENSTGUG00000009944) #15	TOB2 (ENSTGUG00000009941)	PHF5A (ENSTGUG00000025618) #16	ACO2 (ENSTGUG00000009907) #17	POLR3H (ENSTGUG00000009901) #18	CSDC2 (ENSTGUG00000019504) #19	PMM1 (ENSTGUG00000009884) #20	DESI1 (ENSTGUG00000023310) #21	XRCC6 (ENSTGUG00000009852) #22	SNU13 (ENSTGUG00000021658) #23	MEI1 (ENSTGUG00000009814) #24	CCDC134 (ENSTGUG00000009807) #25	SREBF2 (ENSTGUG00000009772) #27	ENSTGUG00000029583	ENSTGUG00000009769 #29	CENPM (ENSTGUG00000020931) #31	SMIM45 (ENSTGUG00000020918) #32	SEPTIN3 (ENSTGUG00000009729) #34	WBP2NL (ENSTGUG00000009723) #35	NAGA (ENSTGUG00000009714) #36	PHETA2 (ENSTGUG00000029353)	SMDT1 (ENSTGUG00000009712)	NDUFA6 (ENSTGUG00000009699)	CYP2D6 (ENSTGUG00000009674)
Common canary	MODERN SPECIES	6	XPNPEP3 (ENSSCAG00000005442)	RBX1 (ENSSCAG00000005448)	EP300 (ENSSCAG00000005456)	L3MBTL2 (ENSSCAG00000005464) #10	CHADL (ENSSCAG00000005472) #11	RANGAP1 (ENSSCAG00000005490) #13	ZC3H7B (ENSSCAG00000005561) #14	TEF (ENSSCAG00000005576) #15	TOB2 (ENSSCAG00000005587)	PHF5A (ENSSCAG00000005591) #16	ACO2 (ENSSCAG00000005597) #17	POLR3H (ENSSCAG00000005603) #18	CSDC2 (ENSSCAG00000005611) #19	PMM1 (ENSSCAG00000005616) #20	DESI1 (ENSSCAG00000005622) #21	XRCC6 (ENSSCAG00000005654) #22	SNU13 (ENSSCAG00000005802) #23	MEI1 (ENSSCAG00000005808) #24	SREBF2 (ENSSCAG00000005828) #27	ENSSCAG00000005849	ENSSCAG00000005851 #29	CENPM (ENSSCAG00000005855) #31	SMIM45 (ENSSCAG00000005859) #32	SEPTIN3 (ENSSCAG00000005867) #34	WBP2NL (ENSSCAG00000005894) #35	NAGA (ENSSCAG00000005897) #36	PHETA2 (ENSSCAG00000005903)	SMDT1 (ENSSCAG00000005905)	NDUFA6 (ENSSCAG00000005906)	CYP2D6 (ENSSCAG00000005910)	TCF20 (ENSSCAG00000005916)
Australian saltwater crocodile	MODERN SPECIES	49	EP300 (ENSCPRG00005019057)	L3MBTL2 (ENSCPRG00005019058) #10	CHADL (ENSCPRG00005019059) #11	ENSCPRG00005019060	RANGAP1 (ENSCPRG00005019061) #13	ZC3H7B (ENSCPRG00005019062) #14	TEF (ENSCPRG00005019063) #15	TOB2 (ENSCPRG00005019065)	PHF5A (ENSCPRG00005019066) #16	ACO2 (ENSCPRG00005019067) #17	POLR3H (ENSCPRG00005019068) #18	CSDC2 (ENSCPRG00005019069) #19	PMM1 (ENSCPRG00005019070) #20	DESI1 (ENSCPRG00005019071) #21	ENSCPRG00005019072	XRCC6 (ENSCPRG00005019073) #22	ENSCPRG00005019074 #23	ENSCPRG00005019075 #23	ENSCPRG00005019076 #24	ENSCPRG00005019077 #24	CCDC134 (ENSCPRG00005019078) #25	SREBF2 (ENSCPRG00005019079) #27	ENSCPRG00005019080	CENPM (ENSCPRG00005019082) #31	SMIM45 (ENSCPRG00005019083) #32	SEPTIN3 (ENSCPRG00005019084) #34	WBP2NL (ENSCPRG00005019085) #35	NAGA (ENSCPRG00005019086) #36	SMDT1 (ENSCPRG00005019088)	NDUFA6 (ENSCPRG00005019089)	NR2C1 (ENSCPRG00005019090)
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00940000161826.C	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.d
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00940000161826.C	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.d
Emydidae	ANCESTRAL SPECIES	5	ENSGT00940000153657.A	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00950000185866	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.d
Three-toed box turtle	MODERN SPECIES	118	EP300 (ENSTMTG00000003703)	L3MBTL2 (ENSTMTG00000003620) #10	CHADL (ENSTMTG00000003593) #11	ENSTMTG00000003576	RANGAP1 (ENSTMTG00000003408) #13	ZC3H7B (ENSTMTG00000003337) #14	ENSTMTG00000003315	TEF (ENSTMTG00000003303) #15	TOB2 (ENSTMTG00000003292)	PHF5A (ENSTMTG00000003280) #16	ACO2 (ENSTMTG00000003259) #17	POLR3H (ENSTMTG00000003249) #18	CSDC2 (ENSTMTG00000008503) #19	PMM1 (ENSTMTG00000008492) #20	DESI1 (ENSTMTG00000008481) #21	XRCC6 (ENSTMTG00000008458) #22	SNU13 (ENSTMTG00000008448) #23	MEI1 (ENSTMTG00000008364) #24	CCDC134 (ENSTMTG00000008350) #25	SREBF2 (ENSTMTG00000008314) #27	ENSTMTG00000008304	CENPM (ENSTMTG00000008294) #31	SMIM45 (ENSTMTG00000008286) #32	SEPTIN3 (ENSTMTG00000008267) #34	WBP2NL (ENSTMTG00000008254) #35	NAGA (ENSTMTG00000008176) #36	PHETA2 (ENSTMTG00000008144)	SMDT1 (ENSTMTG00000008134)	NDUFA6 (ENSTMTG00000008125)	ENSTMTG00000007256
painted turtle	MODERN SPECIES	2381	XPNPEP3 (ENSCPBG00000022890)	RBX1 (ENSCPBG00000022886)	EP300 (ENSCPBG00000021241)	CHADL (ENSCPBG00000021171) #11	L3MBTL2 (ENSCPBG00000021168) #10	ENSCPBG00000021162	RANGAP1 (ENSCPBG00000020589) #13	ZC3H7B (ENSCPBG00000020560) #14	TEF (ENSCPBG00000020555) #15	PHF5A (ENSCPBG00000020547) #16	ACO2 (ENSCPBG00000020545) #17	POLR3H (ENSCPBG00000020544) #18	PMM1 (ENSCPBG00000020543) #20	CSDC2 (ENSCPBG00000020542) #19	DESI1 (ENSCPBG00000020538) #21	XRCC6 (ENSCPBG00000020535) #22	SNU13 (ENSCPBG00000020533) #23	CCDC134 (ENSCPBG00000020531) #25	SREBF2 (ENSCPBG00000020529) #27	ENSCPBG00000020528	ENSCPBG00000020525	CENPM (ENSCPBG00000020523) #31	SEPTIN3 (ENSCPBG00000020516) #34	WBP2NL (ENSCPBG00000020515) #35	NAGA (ENSCPBG00000020511) #36	PHETA2 (ENSCPBG00000020508)
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00940000155618	ENSGT00940000155497	ENSGT00940000153840.a.b #10	ENSGT00940000154464.b #11	ENSGT00940000161826.C	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000163663.A	ENSGT00390000017504 #31	ENSGT00420000030724 #32	ENSGT00940000158004 #34	ENSGT00530000063718.a.b #35	ENSGT00390000008751.a #36	ENSGT00940000162686	ENSGT00390000017489	ENSGT00390000018898	ENSGT00940000153331.d	ENSGT00940000153331.c.b.a
Abingdon island giant tortoise	MODERN SPECIES	88	RBX1 (ENSCABG00000022939)	EP300 (ENSCABG00000022920)	L3MBTL2 (ENSCABG00000022907) #10	CHADL (ENSCABG00000022905) #11	ENSCABG00000022903	RANGAP1 (ENSCABG00000022902) #13	ZC3H7B (ENSCABG00000022901) #14	TEF (ENSCABG00000022900) #15	TOB2 (ENSCABG00000022899)	PHF5A (ENSCABG00000022898) #16	ACO2 (ENSCABG00000022897) #17	POLR3H (ENSCABG00000022894) #18	CSDC2 (ENSCABG00000022893) #19	PMM1 (ENSCABG00000022891) #20	DESI1 (ENSCABG00000022890) #21	XRCC6 (ENSCABG00000022888) #22	SNU13 (ENSCABG00000022883) #23	ENSCABG00000022882 #24	CCDC134 (ENSCABG00000022880) #25	SREBF2 (ENSCABG00000022872) #27	ENSCABG00000022866	CENPM (ENSCABG00000022864) #31	SMIM45 (ENSCABG00000022862) #32	SEPTIN3 (ENSCABG00000022860) #34	WBP2NL (ENSCABG00000022858) #35	NAGA (ENSCABG00000022851) #36	PHETA2 (ENSCABG00000022845)	SMDT1 (ENSCABG00000022843)	NDUFA6 (ENSCABG00000022842)	ENSCABG00000022821	ENSCABG00000022809
Goode s thornscrub tortoise	MODERN SPECIES		RBX1 (ENSGEVG00005002125)	EP300 (ENSGEVG00005002140)	L3MBTL2 (ENSGEVG00005002180) #10	CHADL (ENSGEVG00005002219) #11	ENSGEVG00005002229	RANGAP1 (ENSGEVG00005002246) #13	ZC3H7B (ENSGEVG00005002265) #14	TEF (ENSGEVG00005002306) #15	ENSGEVG00005002321	TOB2 (ENSGEVG00005002327)	PHF5A (ENSGEVG00005002334) #16	ACO2 (ENSGEVG00005002343) #17	POLR3H (ENSGEVG00005002371) #18	CSDC2 (ENSGEVG00005002384) #19	PMM1 (ENSGEVG00005002400) #20	XRCC6 (ENSGEVG00005002426) #22	DESI1 (ENSGEVG00005002450) #21	SNU13 (ENSGEVG00005000024) #23	ENSGEVG00005000036 #24	CCDC134 (ENSGEVG00005000051) #25	SREBF2 (ENSGEVG00005000095) #27	ENSGEVG00005000178	CENPM (ENSGEVG00005000203) #31	SMIM45 (ENSGEVG00005000222) #32	SEPTIN3 (ENSGEVG00005000247) #34	WBP2NL (ENSGEVG00005000291) #35	NAGA (ENSGEVG00005000313) #36	PHETA2 (ENSGEVG00005000333)	SMDT1 (ENSGEVG00005000343)	NDUFA6 (ENSGEVG00005000373)	ENSGEVG00005000395
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	1164	RBX1 (ENSPSIG00000004730)	EP300 (ENSPSIG00000004772)	L3MBTL2 (ENSPSIG00000005049) #10	CHADL (ENSPSIG00000005321) #11	ENSPSIG00000005447	RANGAP1 (ENSPSIG00000005458) #13	ZC3H7B (ENSPSIG00000005743) #14	TEF (ENSPSIG00000006835) #15	TOB2 (ENSPSIG00000007002)	PHF5A (ENSPSIG00000007014) #16	ACO2 (ENSPSIG00000007077) #17	POLR3H (ENSPSIG00000008284) #18	CSDC2 (ENSPSIG00000008362) #19	PMM1 (ENSPSIG00000008638) #20	DESI1 (ENSPSIG00000008686) #21	ENSPSIG00000008759 #22
Chinese turtle	MODERN SPECIES	875																ENSPSIG00000016499 #22	ENSPSIG00000016430	SNU13 (ENSPSIG00000016422) #23	MEI1 (ENSPSIG00000015744) #24	CCDC134 (ENSPSIG00000015552) #25	SREBF2 (ENSPSIG00000014746) #27	ENSPSIG00000014685	ENSPSIG00000014615	CENPM (ENSPSIG00000013293) #31	SEPTIN3 (ENSPSIG00000012269) #34	WBP2NL (ENSPSIG00000012263) #35	NAGA (ENSPSIG00000010820) #36	PHETA2 (ENSPSIG00000000642)	SMDT1 (ENSPSIG00000010743)	CYP2D6 (ENSPSIG00000010040)	TCF20 (ENSPSIG00000009594)
Anura	ANCESTRAL SPECIES	20	ENSGT00950000182951.A.a.b	ENSGT00940000160024	ENSGT00940000160049	ENSGT00760000119398	ENSGT00940000153137.a.a	ENSGT00390000016475	ENSGT00390000009228.b	ENSGT00940000156054	ENSGT00940000154208.d	ENSGT00390000018518 #16	ENSGT00940000154892 #17	ENSGT00390000004383 #18	ENSGT00390000000022.b #19	ENSGT00390000002918.a.b #20	ENSGT00730000111100 #21	ENSGT00940000153239.B #22	ENSGT00550000074840 #23	ENSGT00390000002077 #24	ENSGT00390000020164 #25	ENSGT00940000157339 #27	ENSGT00940000153331.a	ENSGT00530000063718.a.b #35	ENSGT00530000063694.b	ENSGT00390000016992	ENSGT01050000244814.a.a.a.b	ENSGT00950000182696.A.a	ENSGT00940000155964	ENSGT00530000063707.a	ENSGT00940000155955.C	ENSGT00390000003133	ENSGT00390000000159
Frog	MODERN SPECIES	4	tcf20 (ENSXETG00000013417)	rasd2 (ENSXETG00000013420)	ubn2 (ENSXETG00000013423)	shld2 (ENSXETG00000037387)	ttc26 (ENSXETG00000031727)	gucy2c (ENSXETG00000013430)	ENSXETG00000035858	atf7ip (ENSXETG00000031812)	grin2b (ENSXETG00000030602)	emp1 (ENSXETG00000006865)	gsg1 (ENSXETG00000032611)	f8a1 (ENSXETG00000029980)	fam234b (ENSXETG00000034232)	pmm2 (ENSXETG00000035400) #20	desi1 (ENSXETG00000026025) #21	csdc2 (ENSXETG00000004548) #22	snu13 (ENSXETG00000045732) #23	ENSXETG00000049079	mei1 (ENSXETG00000035674) #24	edem3 (ENSXETG00000004541)	rnf2 (ENSXETG00000026022)	trmt1l (ENSXETG00000004539)	ENSXETG00000004536	ivns1abp (ENSXETG00000004535)	glrx2 (ENSXETG00000004534)	b3galt2 (ENSXETG00000004532)	cdc73 (ENSXETG00000004533)	kcnt2 (ENSXETG00000030131)	ENSXETG00000047813	ENSXETG00000043100	ENSXETG00000035235
Leishan spiny toad	MODERN SPECIES	11	JOSD1 (ENSLLEG00000026367)	GTPBP1 (ENSLLEG00000025243)	ENSLLEG00000025187	ENSLLEG00000025165	TOB2 (ENSLLEG00000025143)	ENSLLEG00000025124	ENSLLEG00000025100	PHF5A (ENSLLEG00000025025) #16	ACO2 (ENSLLEG00000024763) #17	ENSLLEG00000024718	ENSLLEG00000024699	POLR3H (ENSLLEG00000024517) #18	CSDC2 (ENSLLEG00000024461) #19	PMM1 (ENSLLEG00000024318) #20	DESI1 (ENSLLEG00000024098) #21	XRCC6 (ENSLLEG00000023773) #22	ENSLLEG00000023732	SNU13 (ENSLLEG00000023648) #23	ENSLLEG00000023017	ENSLLEG00000022964	CCDC134 (ENSLLEG00000022883) #25	SREBF2 (ENSLLEG00000022583) #27	ENSLLEG00000022429	ENSLLEG00000022393	ENSLLEG00000022022	ENSLLEG00000021639 #35	FAM234B (ENSLLEG00000021244)	ENSLLEG00000021110	GSG1 (ENSLLEG00000021042)	EMP1 (ENSLLEG00000020973)	ENSLLEG00000020949
Coelacanth	MODERN SPECIES	967			CHADL (ENSLACG00000013881) #11	ENSLACG00000013661	RANGAP1 (ENSLACG00000013448) #13	ZC3H7B (ENSLACG00000013040) #14	TEF (ENSLACG00000012701) #15	TOB2 (ENSLACG00000012403)	PHF5A (ENSLACG00000012094) #16	ACO2 (ENSLACG00000011854) #17	POLR3H (ENSLACG00000011734) #18	CSDC2 (ENSLACG00000011551) #19	ENSLACG00000022147	PMM1 (ENSLACG00000011148) #20	DESI1 (ENSLACG00000022464) #21	XRCC6 (ENSLACG00000010590) #22	TTC26 (ENSLACG00000010210)	UBN2 (ENSLACG00000009631)	FMC1 (ENSLACG00000009208)	HEBP1 (ENSLACG00000008973)	SLC16A8 (ENSLACG00000007043)	PICK1 (ENSLACG00000006494)	ENSLACG00000006166	SOX10 (ENSLACG00000004437)	POLR2F (ENSLACG00000003931)	ENSLACG00000002132	ENSLACG00000000628
Actinopterygii	ANCESTRAL SPECIES	867															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22
Neopterygii	ANCESTRAL SPECIES	121															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00440000039203 #13	ENSGT00390000018542.a #14	ENSGT00940000156578 #15	ENSGT00940000154208.d	ENSGT00940000154892.m.a #17	ENSGT00390000004383 #18	ENSGT00390000018518 #16
Osteoglossocephalai	ANCESTRAL SPECIES	47	ENSGT00940000160024	ENSGT00940000157367.a.b	ENSGT00940000178227	ENSGT00940000153560.b.b.b.g	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265	ENSGT00950000182951.A.a.b	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129	ENSGT00950000182979.a.a.a.a	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a #21	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.a	ENSGT00940000153657.A	ENSGT00390000001347	ENSGT00940000155618	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19
Clupeocephala	ANCESTRAL SPECIES	83															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Euteleosteomorpha	ANCESTRAL SPECIES	45													ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Acanthomorphata	ANCESTRAL SPECIES	23													ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Euacanthomorphacea	ANCESTRAL SPECIES	6													ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Tiger tail seahorse	MODERN SPECIES	24				mapk8b (ENSHCOG00000009511)	ENSHCOG00000009532	gdf10b (ENSHCOG00000009578)	gdf2 (ENSHCOG00000009592)	rbp3 (ENSHCOG00000009596)	ENSHCOG00000009630	ubtd1b (ENSHCOG00000009648)	mms19 (ENSHCOG00000009664)	zdhhc16b (ENSHCOG00000009671)	vps35l (ENSHCOG00000009736)	get4 (ENSHCOG00000009762)	mrtfab (ENSHCOG00000009798)	xrcc6 (ENSHCOG00000009821) #22	ENSHCOG00000009830	josd1 (ENSHCOG00000009852)	ZC3H7B (ENSHCOG00000009865) #14	rangap1b (ENSHCOG00000009890) #13	chadlb (ENSHCOG00000009959)	ENSHCOG00000009974	l3mbtl2 (ENSHCOG00000010008) #10	EP300 (ENSHCOG00000010078)	CBX7 (ENSHCOG00000010097)	tefa (ENSHCOG00000010116) #15	phf5a (ENSHCOG00000010129) #16	aco2 (ENSHCOG00000010190) #17	csdc2a (ENSHCOG00000010202) #19	ENSHCOG00000010290	ENSHCOG00000010314
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b	ENSGT00390000018509.b
Fugu	MODERN SPECIES		ENSTRUG00000030565	ENSTRUG00000017123	ENSTRUG00000030835	gdf10b (ENSTRUG00000017119)	gdf2 (ENSTRUG00000017118)	ENSTRUG00000017116	rbp3 (ENSTRUG00000020642)	ENSTRUG00000017110	ubtd1b (ENSTRUG00000022232)	mms19 (ENSTRUG00000017103)	zdhhc16b (ENSTRUG00000017097)	vps35l (ENSTRUG00000017090)	get4 (ENSTRUG00000017084)	mrtfab (ENSTRUG00000031201)	ENSTRUG00000023990	xrcc6 (ENSTRUG00000017070) #22	josd1 (ENSTRUG00000017067)	ENSTRUG00000033494	EP300 (ENSTRUG00000017051)	l3mbtl2 (ENSTRUG00000017044) #10	chadlb (ENSTRUG00000017043)	rangap1b (ENSTRUG00000017035) #13	ZC3H7B (ENSTRUG00000017030) #14	tefa (ENSTRUG00000022293) #15	phf5a (ENSTRUG00000030258) #16	aco2 (ENSTRUG00000017021) #17	csdc2a (ENSTRUG00000028048) #19	ENSTRUG00000017007	ENSTRUG00000022094	cby1 (ENSTRUG00000017001)	ENSTRUG00000017000
Tetraodon	MODERN SPECIES	13	LRRC18 (ENSTNIG00000005963)	ARHGAP22 (ENSTNIG00000004993)	mapk8b (ENSTNIG00000004992)	FRMPD2 (ENSTNIG00000003307)	gdf10b (ENSTNIG00000004705)	gdf2 (ENSTNIG00000004704)	rbp3 (ENSTNIG00000004703)	ENSTNIG00000004702	ubtd1b (ENSTNIG00000004701)	mms19 (ENSTNIG00000004700)	zdhhc16b (ENSTNIG00000004699)	vps35l (ENSTNIG00000004698)	get4 (ENSTNIG00000004697)	mrtfab (ENSTNIG00000012948)	ENSTNIG00000001284	xrcc6 (ENSTNIG00000012947) #22	josd1 (ENSTNIG00000012946)	ENSTNIG00000012945	EP300 (ENSTNIG00000012944)	l3mbtl2 (ENSTNIG00000012943) #10	chadlb (ENSTNIG00000012942)	rangap1b (ENSTNIG00000002397) #13	ZC3H7B (ENSTNIG00000012941) #14	tefa (ENSTNIG00000012940) #15	phf5a (ENSTNIG00000012939) #16	aco2 (ENSTNIG00000012938) #17	csdc2a (ENSTNIG00000012937) #19	ENSTNIG00000012936	ENSTNIG00000012935	cby1 (ENSTNIG00000012934)	SH3BP1 (ENSTNIG00000012933)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Ballan wrasse	MODERN SPECIES	225													mrtfab (ENSLBEG00000002808)	ENSLBEG00000002764	desi1b (ENSLBEG00000002733) #21	xrcc6 (ENSLBEG00000002691) #22	ENSLBEG00000002655	josd1 (ENSLBEG00000002624)	ENSLBEG00000002577	EP300 (ENSLBEG00000002487)	l3mbtl2 (ENSLBEG00000002456) #10	chadlb (ENSLBEG00000002434)	rangap1b (ENSLBEG00000002303) #13	ENSLBEG00000002272	ZC3H7B (ENSLBEG00000002212) #14	tefa (ENSLBEG00000002171) #15	phf5a (ENSLBEG00000002141) #16	aco2 (ENSLBEG00000002060) #17	csdc2a (ENSLBEG00000002005) #19	ENSLBEG00000001763	ENSLBEG00000001676
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Perciformes	ANCESTRAL SPECIES	9	ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Cottioidei	ANCESTRAL SPECIES	12													ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Lumpfish	MODERN SPECIES	10	cpped1 (ENSCLMG00005003621)	shisa9a (ENSCLMG00005003618)	SNX29 (ENSCLMG00005002583)	ENSCLMG00005002579	rsl1d1 (ENSCLMG00005002578)	gspt1 (ENSCLMG00005001831)	tomm22 (ENSCLMG00005001807)	maff (ENSCLMG00005001805)	tmem184ba (ENSCLMG00005001803)	csnk1e (ENSCLMG00005001455)	ENSCLMG00005001407	ENSCLMG00005001388	mrtfab (ENSCLMG00005022667)	ENSCLMG00005022665	desi1b (ENSCLMG00005022664) #21	xrcc6 (ENSCLMG00005022659) #22	ENSCLMG00005022650	josd1 (ENSCLMG00005022649)	ENSCLMG00005022647	EP300 (ENSCLMG00005022587)	l3mbtl2 (ENSCLMG00005022573) #10	chadlb (ENSCLMG00005022570)	rangap1b (ENSCLMG00005022554) #13	ZC3H7B (ENSCLMG00005022550) #14	tefa (ENSCLMG00005022548) #15	phf5a (ENSCLMG00005022544) #16	aco2 (ENSCLMG00005022485) #17	csdc2a (ENSCLMG00005022484) #19	ENSCLMG00005022482	ENSCLMG00005022481	PLBD1 (ENSCLMG00005022480)
Stickleback	MODERN SPECIES	5	sap30bp (ENSGACG00000005046)	CDR2L (ENSGACG00000005031)	ENSGACG00000005029	mrtfab (ENSGACG00000005014)	tob1b (ENSGACG00000005010)	SPAG9 (ENSGACG00000004995)	DAGLB (ENSGACG00000004974)	get4 (ENSGACG00000004961)	vps35l (ENSGACG00000004948)	zdhhc16b (ENSGACG00000004937)	mms19 (ENSGACG00000004915)	ubtd1b (ENSGACG00000004908)	ENSGACG00000004906	rbp3 (ENSGACG00000004900)	desi1b (ENSGACG00000004894) #21	xrcc6 (ENSGACG00000004868) #22	ENSGACG00000004865	josd1 (ENSGACG00000004862)	ENSGACG00000004855	EP300 (ENSGACG00000004836)	ENSGACG00000004832 #10	l3mbtl2 (ENSGACG00000004829) #10	chadlb (ENSGACG00000004821)	rangap1b (ENSGACG00000004810) #13	ZC3H7B (ENSGACG00000004799) #14	tefa (ENSGACG00000004793) #15	phf5a (ENSGACG00000004777) #16	aco2 (ENSGACG00000004686) #17	csdc2a (ENSGACG00000004665) #19	ENSGACG00000004649	ENSGACG00000004643
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000178257	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Pike perch	MODERN SPECIES	143	mapk8b (ENSSLUG00000025733)	ENSSLUG00000025744	gdf10b (ENSSLUG00000025746)	gdf2 (ENSSLUG00000025747)	ENSSLUG00000025749	rbp3 (ENSSLUG00000025750)	ENSSLUG00000025755	ubtd1b (ENSSLUG00000025761)	mms19 (ENSSLUG00000025769)	zdhhc16b (ENSSLUG00000025799)	vps35l (ENSSLUG00000025843)	get4 (ENSSLUG00000025894)	mrtfab (ENSSLUG00000025895)	desi1b (ENSSLUG00000025896) #21	ENSSLUG00000025897	xrcc6 (ENSSLUG00000025907) #22	ENSSLUG00000025913	josd1 (ENSSLUG00000025914)	CBX7 (ENSSLUG00000025915)	l3mbtl2 (ENSSLUG00000025920) #10	chadlb (ENSSLUG00000025922)	rangap1b (ENSSLUG00000025925) #13	ZC3H7B (ENSSLUG00000025929) #14	tefa (ENSSLUG00000025932) #15	phf5a (ENSSLUG00000025933) #16	aco2 (ENSSLUG00000025939) #17	csdc2a (ENSSLUG00000025945) #19	ENSSLUG00000025948	ENSSLUG00000025950	PLBD1 (ENSSLUG00000025951)	cby1 (ENSSLUG00000002974)
Channel bull blenny	MODERN SPECIES	10	ENSCGOG00000013731	ENSCGOG00000013726	gdf10b (ENSCGOG00000013717)	gdf2 (ENSCGOG00000013700)	ENSCGOG00000013697	rbp3 (ENSCGOG00000013695)	ENSCGOG00000013693	ubtd1b (ENSCGOG00000013674)	mms19 (ENSCGOG00000013268)	zdhhc16b (ENSCGOG00000013255)	l3mbtl2 (ENSCGOG00000013243) #10	ENSCGOG00000013237	ENSCGOG00000013234	ENSCGOG00000013232	desi1b (ENSCGOG00000013231) #21	xrcc6 (ENSCGOG00000012750) #22	ENSCGOG00000012739	josd1 (ENSCGOG00000012736)	EP300 (ENSCGOG00000012710)	ENSCGOG00000012709	rsl1d1 (ENSCGOG00000012707)	gspt1 (ENSCGOG00000012478)	dmc1 (ENSCGOG00000012453)	tomm22 (ENSCGOG00000012448)	maff (ENSCGOG00000012445)	tmem184ba (ENSCGOG00000012343)	csnk1e (ENSCGOG00000012143)	ENSCGOG00000012136	ENSCGOG00000012386	ENSCGOG00000012384	ENSCGOG00000012383
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Gilthead seabream	MODERN SPECIES	12	gdf10b (ENSSAUG00010002617)	gdf2 (ENSSAUG00010002625)	ENSSAUG00010002632	rbp3 (ENSSAUG00010002641)	ENSSAUG00010002648	ubtd1b (ENSSAUG00010002664)	mms19 (ENSSAUG00010002697)	ENSSAUG00010002728	get4 (ENSSAUG00010002741)	vps35l (ENSSAUG00010002925)	ENSSAUG00010003265	zdhhc16b (ENSSAUG00010003273)	mrtfab (ENSSAUG00010003284)	ENSSAUG00010003294	desi1b (ENSSAUG00010003304) #21	xrcc6 (ENSSAUG00010003319) #22	ENSSAUG00010003444	josd1 (ENSSAUG00010003448)	ENSSAUG00010003460	EP300 (ENSSAUG00010003472)	l3mbtl2 (ENSSAUG00010003551) #10	chadlb (ENSSAUG00010003657)	rangap1b (ENSSAUG00010003677) #13	ZC3H7B (ENSSAUG00010003702) #14	tefa (ENSSAUG00010003722) #15	phf5a (ENSSAUG00010003737) #16	aco2 (ENSSAUG00010003770) #17	csdc2a (ENSSAUG00010003786) #19	ENSSAUG00010003819	ENSSAUG00010006505	PLBD1 (ENSSAUG00010006533)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b
European seabass	MODERN SPECIES	11	mapk8b (ENSDLAG00005015180)	ENSDLAG00005017112	gdf10b (ENSDLAG00005017179)	gdf2 (ENSDLAG00005017187)	RBP3 (ENSDLAG00005017198)	rbp3 (ENSDLAG00005017214)	ENSDLAG00005017225	ubtd1b (ENSDLAG00005017291)	mms19 (ENSDLAG00005017304)	zdhhc16b (ENSDLAG00005017597)	ENSDLAG00005017644	ENSDLAG00005018874	ENSDLAG00005018943	ENSDLAG00005018987	desi1b (ENSDLAG00005026916) #21	xrcc6 (ENSDLAG00005019010) #22	josd1 (ENSDLAG00005033772)	ENSDLAG00005033106	ENSDLAG00005019268	l3mbtl2 (ENSDLAG00005019488) #10	ENSDLAG00005019512	chadlb (ENSDLAG00005019521)	rangap1b (ENSDLAG00005027546) #13	ZC3H7B (ENSDLAG00005019560) #14	tefa (ENSDLAG00005019578) #15	phf5a (ENSDLAG00005019582) #16	aco2 (ENSDLAG00005019603) #17	CSDC2 (ENSDLAG00005033654) #19	ENSDLAG00005019682	ENSDLAG00005020252	pvalb3 (ENSDLAG00005020292)
Large yellow croaker	MODERN SPECIES	488	mapk8b (ENSLCRG00005007318)	FRMPD2 (ENSLCRG00005009507)	gdf10b (ENSLCRG00005009506)	gdf2 (ENSLCRG00005009505)	RBP3 (ENSLCRG00005009504)	rbp3 (ENSLCRG00005009503)	ENSLCRG00005009500	ubtd1b (ENSLCRG00005009499)	mms19 (ENSLCRG00005008863)	zdhhc16b (ENSLCRG00005008858)	vps35l (ENSLCRG00005008733)	get4 (ENSLCRG00005008718)	mrtfab (ENSLCRG00005008710)	ENSLCRG00005008707	desi1b (ENSLCRG00005008706) #21	xrcc6 (ENSLCRG00005008686) #22	ENSLCRG00005008685	josd1 (ENSLCRG00005008683)	ENSLCRG00005008682	EP300 (ENSLCRG00005007933)	ENSLCRG00005007921	l3mbtl2 (ENSLCRG00005007917) #10	chadlb (ENSLCRG00005007914)	rangap1b (ENSLCRG00005007889) #13	ZC3H7B (ENSLCRG00005007872) #14	tefa (ENSLCRG00005007867) #15	phf5a (ENSLCRG00005007856) #16	aco2 (ENSLCRG00005007240) #17	ENSLCRG00005006906	ENSLCRG00005006897	cby1 (ENSLCRG00005006895)
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00950000183015.B.a.a	ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00950000183015.B.a.a	ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Climbing perch	MODERN SPECIES	10	cby1 (ENSATEG00000007844)	ENSATEG00000007746	ENSATEG00000007624	csdc2a (ENSATEG00000027514) #19	aco2 (ENSATEG00000026296) #17	phf5a (ENSATEG00000007455) #16	tefa (ENSATEG00000025207) #15	ENSATEG00000007442	ENSATEG00000007345	csdc2a (ENSATEG00000026239) #19	ENSATEG00000025673	ENSATEG00000029855	ENSATEG00000026132	mrtfab (ENSATEG00000007179)	desi1b (ENSATEG00000026392) #21	xrcc6 (ENSATEG00000007119) #22	ENSATEG00000007109	josd1 (ENSATEG00000007105)	ENSATEG00000027992	ENSATEG00000006944	l3mbtl2 (ENSATEG00000006919) #10	chadlb (ENSATEG00000006910)	rangap1b (ENSATEG00000006838) #13	rangap1b (ENSATEG00000006586) #13	ZC3H7B (ENSATEG00000006539) #14	tefa (ENSATEG00000006521) #15	phf5a (ENSATEG00000006506) #16	aco2 (ENSATEG00000030073) #17	ENSATEG00000006353	ENSATEG00000006234	zdhhc16b (ENSATEG00000006217)
Siamese fighting fish	MODERN SPECIES	9	gdf2 (ENSBSLG00000023702)	rbp3 (ENSBSLG00000023698)	ENSBSLG00000023685	ubtd1b (ENSBSLG00000023681)	gdf10b (ENSBSLG00000023677)	gdf2 (ENSBSLG00000023674)	rbp3 (ENSBSLG00000023668)	ubtd1b (ENSBSLG00000023622)	mms19 (ENSBSLG00000023434)	zdhhc16b (ENSBSLG00000023411)	vps35l (ENSBSLG00000023260)	get4 (ENSBSLG00000023194)	mrtfab (ENSBSLG00000023133)	ENSBSLG00000023118	desi1b (ENSBSLG00000023110) #21	xrcc6 (ENSBSLG00000022780) #22	ENSBSLG00000022771	josd1 (ENSBSLG00000022770)	ENSBSLG00000022769	EP300 (ENSBSLG00000022112)	l3mbtl2 (ENSBSLG00000021995) #10	chadlb (ENSBSLG00000021966)	ENSBSLG00000021931	ENSBSLG00000021915	rangap1b (ENSBSLG00000021844) #13	ENSBSLG00000021685 #14	tefa (ENSBSLG00000021678) #15	phf5a (ENSBSLG00000021671) #16	aco2 (ENSBSLG00000021620) #17	csdc2a (ENSBSLG00000021611) #19	ENSBSLG00000021437
Zig-zag eel	MODERN SPECIES	10	ARHGAP22 (ENSMAMG00000002805)	mapk8b (ENSMAMG00000002853)	ENSMAMG00000026460	gdf10b (ENSMAMG00000002975)	gdf2 (ENSMAMG00000002988)	rbp3 (ENSMAMG00000002997)	ENSMAMG00000003038	UBTD1 (ENSMAMG00000027407)	mms19 (ENSMAMG00000003115)	zdhhc16b (ENSMAMG00000003147)	ENSMAMG00000003184	ENSMAMG00000003207	ENSMAMG00000003242	ENSMAMG00000003315	desi1b (ENSMAMG00000027199) #21	xrcc6 (ENSMAMG00000003368) #22	ENSMAMG00000003420	josd1 (ENSMAMG00000003443)	ENSMAMG00000003463	ENSMAMG00000003489	l3mbtl2 (ENSMAMG00000003515) #10	ENSMAMG00000024639	chadlb (ENSMAMG00000003543)	rangap1b (ENSMAMG00000003552) #13	ZC3H7B (ENSMAMG00000003650) #14	tefa (ENSMAMG00000003725) #15	phf5a (ENSMAMG00000003744) #16	aco2 (ENSMAMG00000003762) #17	csdc2a (ENSMAMG00000003854) #19	ENSMAMG00000003866	ENSMAMG00000024757
Carangaria	ANCESTRAL SPECIES	13	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Tongue sole	MODERN SPECIES	18	ENSCSEG00000020346	ENSCSEG00000020351	gdf10b (ENSCSEG00000020353)	gdf2 (ENSCSEG00000020356)	rbp3 (ENSCSEG00000020359)	ENSCSEG00000020363	ubtd1b (ENSCSEG00000020376)	mms19 (ENSCSEG00000020378)	zdhhc16b (ENSCSEG00000020386)	vps35l (ENSCSEG00000020390)	get4 (ENSCSEG00000020396)	mrtfab (ENSCSEG00000020403)	ENSCSEG00000020419	ENSCSEG00000020421	desi1b (ENSCSEG00000020425) #21	xrcc6 (ENSCSEG00000020434) #22	ENSCSEG00000020440	josd1 (ENSCSEG00000020444)	ENSCSEG00000020449	EP300 (ENSCSEG00000020452)	ENSCSEG00000020474	l3mbtl2 (ENSCSEG00000020478) #10	chadlb (ENSCSEG00000020482)	rangap1b (ENSCSEG00000020486) #13	ZC3H7B (ENSCSEG00000020490) #14	tefa (ENSCSEG00000020497) #15	phf5a (ENSCSEG00000020499) #16	aco2 (ENSCSEG00000020501) #17	wbp2 (ENSCSEG00000020507) ##35	ENSCSEG00000020518	mrpl38 (ENSCSEG00000020520)
Turbot	MODERN SPECIES	9	ARHGAP22 (ENSSMAG00000005617)	mapk8b (ENSSMAG00000005641)	ENSSMAG00000005766	gdf10b (ENSSMAG00000005862)	gdf2 (ENSSMAG00000005870)	rbp3 (ENSSMAG00000005877)	ENSSMAG00000005884	ubtd1b (ENSSMAG00000005951)	mms19 (ENSSMAG00000005975)	zdhhc16b (ENSSMAG00000006209)	ENSSMAG00000006283	ENSSMAG00000006357	ENSSMAG00000031000	ENSSMAG00000006443	desi1b (ENSSMAG00000006467) #21	xrcc6 (ENSSMAG00000006496) #22	ENSSMAG00000033260	josd1 (ENSSMAG00000023674)	ENSSMAG00000006575	ENSSMAG00000006608	l3mbtl2 (ENSSMAG00000006666) #10	chadlb (ENSSMAG00000006710)	rangap1b (ENSSMAG00000006741) #13	ZC3H7B (ENSSMAG00000006961) #14	tefa (ENSSMAG00000007034) #15	phf5a (ENSSMAG00000007054) #16	aco2 (ENSSMAG00000007063) #17	csdc2a (ENSSMAG00000007134) #19	ENSSMAG00000007175	ENSSMAG00000007319	ENSSMAG00000007355
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Barramundi perch	MODERN SPECIES	285														desi1b (ENSLCAG00010026482) #21	ENSLCAG00010026484	xrcc6 (ENSLCAG00010026491) #22	josd1 (ENSLCAG00010026501)	CBX7 (ENSLCAG00010026504)	ENSLCAG00010026520	l3mbtl2 (ENSLCAG00010026525) #10	chadlb (ENSLCAG00010026533)	rangap1b (ENSLCAG00010026538) #13	ZC3H7B (ENSLCAG00010026542) #14	tefa (ENSLCAG00010026549) #15	phf5a (ENSLCAG00010026552) #16	aco2 (ENSLCAG00010000167) #17	csdc2a (ENSLCAG00010000182) #19	ENSLCAG00010000198	ENSLCAG00010000218	ENSLCAG00010000272	cby1 (ENSLCAG00010000387)
Seriola	ANCESTRAL SPECIES	1	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a.c	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Greater amberjack	MODERN SPECIES	27	ENSSDUG00000006715	gdf10b (ENSSDUG00000006729)	gdf2 (ENSSDUG00000006741)	RBP3 (ENSSDUG00000006748)	rbp3 (ENSSDUG00000006762)	ENSSDUG00000006785	ubtd1b (ENSSDUG00000006863)	ubtd1b (ENSSDUG00000007100)	mms19 (ENSSDUG00000007129)	zdhhc16b (ENSSDUG00000007237)	vps35l (ENSSDUG00000007265)	get4 (ENSSDUG00000007358)	mrtfab (ENSSDUG00000007393)	ENSSDUG00000007510	desi1b (ENSSDUG00000007525) #21	xrcc6 (ENSSDUG00000007542) #22	josd1 (ENSSDUG00000007560)	ENSSDUG00000007573	EP300 (ENSSDUG00000007604)	l3mbtl2 (ENSSDUG00000007790) #10	ENSSDUG00000007839	chadlb (ENSSDUG00000007853)	rangap1b (ENSSDUG00000007886) #13	ZC3H7B (ENSSDUG00000007927) #14	tefa (ENSSDUG00000007978) #15	phf5a (ENSSDUG00000008019) #16	aco2 (ENSSDUG00000008036) #17	csdc2a (ENSSDUG00000008082) #19	ENSSDUG00000008101	ENSSDUG00000008135	PLBD1 (ENSSDUG00000008141)
Yellowtail amberjack	MODERN SPECIES	3252	gdf10b (ENSSLDG00000010704)	gdf2 (ENSSLDG00000010697)	RBP3 (ENSSLDG00000010690)	rbp3 (ENSSLDG00000010674)	ENSSLDG00000010565	ubtd1b (ENSSLDG00000010511)	mms19 (ENSSLDG00000010244)	zdhhc16b (ENSSLDG00000010182)	vps35l (ENSSLDG00000010117)	get4 (ENSSLDG00000010076)	ENSSLDG00000010052	ENSSLDG00000010037	ENSSLDG00000010024	ENSSLDG00000010010	desi1b (ENSSLDG00000009991) #21	xrcc6 (ENSSLDG00000009974) #22	ENSSLDG00000009956	josd1 (ENSSLDG00000009941)	ENSSLDG00000009911	EP300 (ENSSLDG00000009870)	l3mbtl2 (ENSSLDG00000009810) #10	chadlb (ENSSLDG00000009774)	rangap1b (ENSSLDG00000009736) #13	ZC3H7B (ENSSLDG00000009664) #14	tefa (ENSSLDG00000009635) #15	phf5a (ENSSLDG00000009619) #16	aco2 (ENSSLDG00000009538) #17	csdc2a (ENSSLDG00000009512) #19	ENSSLDG00000009203	ENSSLDG00000009137	PLBD1 (ENSSLDG00000009056)
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00940000155133.a.a.b	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Aplocheiloidei	ANCESTRAL SPECIES	181														ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00940000153840.a.b #10	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a
Mangrove rivulus	MODERN SPECIES	201				rbp3 (ENSKMAG00000001595)	ENSKMAG00000001617	ubtd1b (ENSKMAG00000001696)	mms19 (ENSKMAG00000001734)	zdhhc16b (ENSKMAG00000001791)	vps35l (ENSKMAG00000001830)	get4 (ENSKMAG00000001969)	mrtfab (ENSKMAG00000002014)	ENSKMAG00000002067	mrpl27 (ENSKMAG00000002075)	ENSKMAG00000002089	desi1b (ENSKMAG00000002107) #21	xrcc6 (ENSKMAG00000002141) #22	ENSKMAG00000002219	ENSKMAG00000002237	ENSKMAG00000002268	ENSKMAG00000002296	ENSKMAG00000002308	ENSKMAG00000002320	ENSKMAG00000002330	ENSKMAG00000002339	ENSKMAG00000002361	ENSKMAG00000002424	ENSKMAG00000002431	ENSKMAG00000002441	ENSKMAG00000002461	ENSKMAG00000002596	ENSKMAG00000002611
Turquoise killifish	MODERN SPECIES	1621	TOMM22 (ENSNFUG00015019305)	MAFF (ENSNFUG00015019304)	tmem184ba (ENSNFUG00015019283)	ENSNFUG00015019276	csnk1e (ENSNFUG00015019240)	ENSNFUG00015019211	BX000473.3 (ENSNFUG00015019205)	CDC42EP1 (ENSNFUG00015019200)	SH3BP1 (ENSNFUG00015019194)	CSDC2A (ENSNFUG00015019188) #19	ENSNFUG00015019187	ACO2 (ENSNFUG00015019055) #17	mrtfab (ENSNFUG00015019027)	ENSNFUG00015019018	desi1b (ENSNFUG00015019008) #21	xrcc6 (ENSNFUG00015018912) #22	ENSNFUG00015018905	josd1 (ENSNFUG00015018897)	CBX7 (ENSNFUG00015018890)	EP300 (ENSNFUG00015018836)	L3MBTL2 (ENSNFUG00015018832) #10	phf5a (ENSNFUG00015018826) #16	TEFA (ENSNFUG00015018821) #15	ZC3H7B (ENSNFUG00015018799) #14	RANGAP1 (ENSNFUG00015018710) #13	chadlb (ENSNFUG00015018697)	GET4 (ENSNFUG00015018662)	C12H16ORF62 (ENSNFUG00015018337)	zdhhc16b (ENSNFUG00015018329)	MMS19 (ENSNFUG00015017663)	UBTD1B (ENSNFUG00015017624)
Cyprinodontoidei	ANCESTRAL SPECIES	28	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT01030000234586.A.a.a.a
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b
Poecilia	ANCESTRAL SPECIES	15	ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b
NAME_6	ANCESTRAL SPECIES		ENSGT00940000153692.B.a	ENSGT00940000161964.g.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b
Amazon molly	MODERN SPECIES	256	gdf10b (ENSPFOG00000017587)	gdf2 (ENSPFOG00000021908)	RBP3 (ENSPFOG00000017569)	ENSPFOG00000017527	ENSPFOG00000017472	ubtd1b (ENSPFOG00000017463)	mms19 (ENSPFOG00000017424)	zdhhc16b (ENSPFOG00000024323)	zdhhc16b (ENSPFOG00000017419)	vps35l (ENSPFOG00000017291)	get4 (ENSPFOG00000017263)	mrtfab (ENSPFOG00000017227)	ENSPFOG00000023236	ENSPFOG00000017214	desi1b (ENSPFOG00000017196) #21	xrcc6 (ENSPFOG00000017173) #22	ENSPFOG00000023433	josd1 (ENSPFOG00000017162)	ENSPFOG00000017155	ENSPFOG00000017073	l3mbtl2 (ENSPFOG00000017006) #10	chadlb (ENSPFOG00000016956)	rangap1b (ENSPFOG00000016919) #13	ZC3H7B (ENSPFOG00000016834) #14	tefa (ENSPFOG00000016821) #15	phf5a (ENSPFOG00000016814) #16	aco2 (ENSPFOG00000016765) #17	csdc2a (ENSPFOG00000016755) #19	ENSPFOG00000020239	med24 (ENSPFOG00000016585)	ENSPFOG00000016574
Sailfin molly	MODERN SPECIES	1260										zdhhc16b (ENSPLAG00000001805)	vps35l (ENSPLAG00000001833)	get4 (ENSPLAG00000001858)	mrtfab (ENSPLAG00000001889)	ENSPLAG00000001910	desi1b (ENSPLAG00000001924) #21	xrcc6 (ENSPLAG00000000562) #22	josd1 (ENSPLAG00000001946)	ENSPLAG00000001958
Guppy	MODERN SPECIES	449	mapk8b (ENSPREG00000021469)	FRMPD2 (ENSPREG00000021427)	gdf10b (ENSPREG00000021403)	gdf2 (ENSPREG00000021392)	RBP3 (ENSPREG00000021386)	rbp3 (ENSPREG00000021364)	ENSPREG00000021342	ubtd1b (ENSPREG00000021331)	mms19 (ENSPREG00000021276)	zdhhc16b (ENSPREG00000021251)	vps35l (ENSPREG00000021171)	get4 (ENSPREG00000021122)	mrtfab (ENSPREG00000021039)	ENSPREG00000020998	desi1b (ENSPREG00000020982) #21	xrcc6 (ENSPREG00000020957) #22	josd1 (ENSPREG00000020940)	ENSPREG00000020913	EP300 (ENSPREG00000020888)	ENSPREG00000020876	ENSPREG00000020869	l3mbtl2 (ENSPREG00000020853) #10	chadlb (ENSPREG00000020780)	rangap1b (ENSPREG00000020745) #13	ZC3H7B (ENSPREG00000020727) #14	tefa (ENSPREG00000020710) #15	phf5a (ENSPREG00000020700) #16	aco2 (ENSPREG00000020672) #17	csdc2a (ENSPREG00000020652) #19	ENSPREG00000020645	ENSPREG00000020640
Platyfish	MODERN SPECIES	1	mapk8b (ENSXMAG00000009503)	FRMPD2 (ENSXMAG00000009529)	gdf10b (ENSXMAG00000028699)	gdf2 (ENSXMAG00000009540)	RBP3 (ENSXMAG00000009541)	rbp3 (ENSXMAG00000029663)	ENSXMAG00000029632	ubtd1b (ENSXMAG00000022287)	mms19 (ENSXMAG00000009570)	zdhhc16b (ENSXMAG00000025584)	vps35l (ENSXMAG00000009612)	get4 (ENSXMAG00000009654)	mrtfab (ENSXMAG00000009671)	ENSXMAG00000009684	desi1b (ENSXMAG00000009685) #21	xrcc6 (ENSXMAG00000009691) #22	josd1 (ENSXMAG00000021882)	ENSXMAG00000009724	EP300 (ENSXMAG00000009730)	l3mbtl2 (ENSXMAG00000009758) #10	chadlb (ENSXMAG00000000655)	rangap1b (ENSXMAG00000000663) #13	ZC3H7B (ENSXMAG00000026502) #14	tefa (ENSXMAG00000000678) #15	phf5a (ENSXMAG00000000679) #16	aco2 (ENSXMAG00000000683) #17	csdc2a (ENSXMAG00000000696) #19	ENSXMAG00000027223	ENSXMAG00000019660	med24 (ENSXMAG00000011374)	ENSXMAG00000028761
NAME_4	ANCESTRAL SPECIES	27	ENSGT00950000183015.B.a.a	ENSGT00940000153692.B.a	ENSGT00940000155133.a.a.b	ENSGT00940000157214.f.a	ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438
Mummichog	MODERN SPECIES	2261	LRRC18 (ENSFHEG00000017543)	ARHGAP22 (ENSFHEG00000017525)	mapk8b (ENSFHEG00000017471)	gdf10b (ENSFHEG00000017381)	gdf2 (ENSFHEG00000017378)	RBP3 (ENSFHEG00000017358)	rbp3 (ENSFHEG00000017348)	ENSFHEG00000017324	ubtd1b (ENSFHEG00000017199)	mms19 (ENSFHEG00000017171)	zdhhc16b (ENSFHEG00000000433)	vps35l (ENSFHEG00000016996)	get4 (ENSFHEG00000016923)	mrtfab (ENSFHEG00000016878)	desi1b (ENSFHEG00000016842) #21	xrcc6 (ENSFHEG00000016833) #22	ENSFHEG00000016818	josd1 (ENSFHEG00000016813)	ENSFHEG00000016782	EP300 (ENSFHEG00000016768)	l3mbtl2 (ENSFHEG00000016621) #10	chadlb (ENSFHEG00000016608)
Sheepshead minnow	MODERN SPECIES	509				HTR2A (ENSCVAG00000002069)	dhrs13b.1 (ENSCVAG00000002073)	dhrs13b.1 (ENSCVAG00000002076)	rbp3 (ENSCVAG00000002079)	ENSCVAG00000002086	ubtd1b (ENSCVAG00000002093)	mms19 (ENSCVAG00000002113)	zdhhc16b (ENSCVAG00000002126)	vps35l (ENSCVAG00000002135)	get4 (ENSCVAG00000002141)	mrtfab (ENSCVAG00000002168)	desi1b (ENSCVAG00000002180) #21	xrcc6 (ENSCVAG00000002189) #22	josd1 (ENSCVAG00000002195)	CBX7 (ENSCVAG00000002206)	EP300 (ENSCVAG00000002250)	ENSCVAG00000002255	ENSCVAG00000002259 #10	chadlb (ENSCVAG00000002262)	rangap1b (ENSCVAG00000002275) #13
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00390000008061.ab.a.a.a.a	ENSGT00390000008061.ab.a.a.a.b	ENSGT00940000155955.C.i.b
Indian medaka	MODERN SPECIES	17	mms19 (ENSOMEG00000009691)	ubtd1b (ENSOMEG00000009588)	mrtfab (ENSOMEG00000009541)	VSTM4 (ENSOMEG00000009429)	ENSOMEG00000000232	ENSOMEG00000009350	LRRC18 (ENSOMEG00000009322)	ARHGAP22 (ENSOMEG00000009296)	mapk8b (ENSOMEG00000009255)	FRMPD2 (ENSOMEG00000009174)	gdf10b (ENSOMEG00000009101)	gdf2 (ENSOMEG00000009094)	rbp3 (ENSOMEG00000009087)	ENSOMEG00000009072	ENSOMEG00000009039	xrcc6 (ENSOMEG00000008998) #22	ENSOMEG00000008945	josd1 (ENSOMEG00000008932)	ENSOMEG00000008892	EP300 (ENSOMEG00000008863)	ENSOMEG00000008818	l3mbtl2 (ENSOMEG00000008798) #10	chadlb (ENSOMEG00000008740)	rangap1b (ENSOMEG00000008703) #13	ZC3H7B (ENSOMEG00000008642) #14	tefa (ENSOMEG00000008586) #15	phf5a (ENSOMEG00000008564) #16	aco2 (ENSOMEG00000000704) #17	csdc2a (ENSOMEG00000008503) #19	ENSOMEG00000008492	ENSOMEG00000000840
Javanese ricefish	MODERN SPECIES	10	get4 (ENSOJAG00000002648)	zdhhc16b (ENSOJAG00000002874)	mms19 (ENSOJAG00000002890)	ubtd1b (ENSOJAG00000002939)	ENSOJAG00000002967	rbp3 (ENSOJAG00000003044)	gdf2 (ENSOJAG00000003053)	gdf10b (ENSOJAG00000003077)	FRMPD2 (ENSOJAG00000003085)	mapk8b (ENSOJAG00000003171)	ARHGAP22 (ENSOJAG00000003508)	VSTM4 (ENSOJAG00000004182)	ENSOJAG00000004244	ENSOJAG00000004257	ENSOJAG00000004271	xrcc6 (ENSOJAG00000004317) #22	ENSOJAG00000004376	josd1 (ENSOJAG00000004391)	CBX7 (ENSOJAG00000004405)	l3mbtl2 (ENSOJAG00000004841) #10	chadlb (ENSOJAG00000004868)	rangap1b (ENSOJAG00000004890) #13	ZC3H7B (ENSOJAG00000005022) #14	tefa (ENSOJAG00000005056) #15	phf5a (ENSOJAG00000005081) #16	aco2 (ENSOJAG00000005119) #17	csdc2a (ENSOJAG00000005463) #19	ENSOJAG00000005484	ENSOJAG00000005487	ENSOJAG00000005500	ENSOJAG00000005507
Oryzias_a	ANCESTRAL SPECIES	32	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	1185	narf (ENSOSIG00000015712)	FDXR (ENSOSIG00000015640)	vps35l (ENSOSIG00000015340)	zdhhc16b (ENSOSIG00000015336)	ENSOSIG00000015100	rbp3 (ENSOSIG00000015099)	gdf2 (ENSOSIG00000015098)	gdf10b (ENSOSIG00000015097)	ENSOSIG00000015095	mapk8b (ENSOSIG00000015093)	ARHGAP22 (ENSOSIG00000015090)	LRRC18 (ENSOSIG00000015083)	ENSOSIG00000015080	mrtfab (ENSOSIG00000015076)	ENSOSIG00000015075	xrcc6 (ENSOSIG00000015074) #22	josd1 (ENSOSIG00000015073)	ENSOSIG00000015072
Chinese medaka	MODERN SPECIES	4189																xrcc6 (ENSOSIG00000013729) #22
Japanese Medaka HdrR	MODERN SPECIES	10	mms19 (ENSORLG00000020323)	zdhhc16b (ENSORLG00000020332)	ubtd1b (ENSORLG00000029553)	ENSORLG00000020302	rbp3 (ENSORLG00000020292)	gdf2 (ENSORLG00000020287)	gdf10b (ENSORLG00000020281)	ENSORLG00000028063	FRMPD2 (ENSORLG00000002323)	mapk8b (ENSORLG00000002370)	ARHGAP22 (ENSORLG00000002387)	LRRC18 (ENSORLG00000002394)	VSTM4 (ENSORLG00000002399)	mrtfab (ENSORLG00000002421)	ENSORLG00000025662	xrcc6 (ENSORLG00000002436) #22	josd1 (ENSORLG00000029725)	ENSORLG00000026332	ENSORLG00000002496	l3mbtl2 (ENSORLG00000002510) #10	chadlb (ENSORLG00000002517)	rangap1b (ENSORLG00000002547) #13	ZC3H7B (ENSORLG00000002568) #14	tefa (ENSORLG00000002582) #15	phf5a (ENSORLG00000002591) #16	aco2 (ENSORLG00000002618) #17	csdc2a (ENSORLG00000024428) #19	ENSORLG00000028944	ENSORLG00000002652	ENSORLG00000028670	ENSORLG00000029436
Ovalentaria_B	ANCESTRAL SPECIES	7													ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT01070000254302	ENSGT00940000153840.a.b #10	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326
Pomacentridae	ANCESTRAL SPECIES	182															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19
Pomacentridae_A	ANCESTRAL SPECIES	214															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19
Amphiprion	ANCESTRAL SPECIES	254															ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19
Orange clownfish	MODERN SPECIES	25														ENSAPEG00000020779	desi1b (ENSAPEG00000020729) #21	xrcc6 (ENSAPEG00000020712) #22	josd1 (ENSAPEG00000020682)	ENSAPEG00000020659	EP300 (ENSAPEG00000020628)	l3mbtl2 (ENSAPEG00000020506) #10	chadlb (ENSAPEG00000020436)	rangap1b (ENSAPEG00000020382) #13	ZC3H7B (ENSAPEG00000020311) #14	tefa (ENSAPEG00000020278) #15	phf5a (ENSAPEG00000020260) #16	aco2 (ENSAPEG00000020171) #17	csdc2a (ENSAPEG00000020151) #19
Clown anemonefish	MODERN SPECIES	1418														ENSAOCG00000002784	desi1b (ENSAOCG00000002807) #21	xrcc6 (ENSAOCG00000021344) #22	josd1 (ENSAOCG00000021330)	ENSAOCG00000021307	EP300 (ENSAOCG00000021276)	l3mbtl2 (ENSAOCG00000021254) #10	chadlb (ENSAOCG00000021226)	rangap1b (ENSAOCG00000021138) #13	ZC3H7B (ENSAOCG00000021081) #14	tefa (ENSAOCG00000020967) #15	phf5a (ENSAOCG00000020917) #16	aco2 (ENSAOCG00000020887) #17	csdc2a (ENSAOCG00000020795) #19	ENSAOCG00000020758	ENSAOCG00000020662	ENSAOCG00000020520	ENSAOCG00000020504
Spiny chromis	MODERN SPECIES	348															ENSAPOG00000012724	xrcc6 (ENSAPOG00000012704) #22	josd1 (ENSAPOG00000012599)	ENSAPOG00000012563	EP300 (ENSAPOG00000012548)	l3mbtl2 (ENSAPOG00000012528) #10	chadlb (ENSAPOG00000012489)	rangap1b (ENSAPOG00000012345) #13	ENSAPOG00000012333	brinp3a.1 (ENSAPOG00000012311)
Bicolor damselfish	MODERN SPECIES	64															desi1b (ENSSPAG00000015173) #21	xrcc6 (ENSSPAG00000015199) #22	josd1 (ENSSPAG00000015226)	ENSSPAG00000015238
Cichlidae	ANCESTRAL SPECIES	28	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT01070000254302	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Haplochromini	ANCESTRAL SPECIES	22	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Haplochromini_A	ANCESTRAL SPECIES	24	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Haplochromini_B	ANCESTRAL SPECIES	24	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.m.b #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00440000039203.i #13	ENSGT00940000165277.a	ENSGT00990000204107	ENSGT00940000153840.a.b #10	ENSGT00940000155497.a.b	ENSGT00940000158365.f.a	ENSGT00390000009228.b	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000015750	ENSGT00390000011343	ENSGT00940000155032.l	ENSGT00390000015583	ENSGT00940000158630.g.a	ENSGT00940000157727.x.a	ENSGT00390000014726.c.b	ENSGT00390000014726.c.a	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000155133.a.a.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a
Eastern happy	MODERN SPECIES	20	csdc2a (ENSACLG00000019286) #19	aco2 (ENSACLG00000019179) #17	phf5a (ENSACLG00000019161) #16	tefa (ENSACLG00000019138) #15	ZC3H7B (ENSACLG00000019120) #14	rangap1b (ENSACLG00000019057) #13	chadlb (ENSACLG00000019020)	ENSACLG00000019013	l3mbtl2 (ENSACLG00000018958) #10	EP300 (ENSACLG00000018899)	ENSACLG00000018872	josd1 (ENSACLG00000018856)	mrtfab (ENSACLG00000018713)	ENSACLG00000018698	desi1b (ENSACLG00000018683) #21	xrcc6 (ENSACLG00000018608) #22	ENSACLG00000018598	get4 (ENSACLG00000018508)	vps35l (ENSACLG00000018376)	zdhhc16b (ENSACLG00000018343)	mms19 (ENSACLG00000018291)	ubtd1b (ENSACLG00000018265)	ENSACLG00000018219	rbp3 (ENSACLG00000018197)	RBP3 (ENSACLG00000018195)	gdf2 (ENSACLG00000018190)	gdf10b (ENSACLG00000017942)	FRMPD2 (ENSACLG00000017864)	mapk8b (ENSACLG00000017778)	ARHGAP22 (ENSACLG00000017701)	ENSACLG00000017680
Zebra mbuna	MODERN SPECIES	138										EP300 (ENSMZEG00005028074)	ENSMZEG00005028075	josd1 (ENSMZEG00005028076)	mrtfab (ENSMZEG00005028077)	ENSMZEG00005028078	desi1b (ENSMZEG00005028079) #21	xrcc6 (ENSMZEG00005028080) #22	ENSMZEG00005028081	get4 (ENSMZEG00005028082)	vps35l (ENSMZEG00005028083)	zdhhc16b (ENSMZEG00005028084)	mms19 (ENSMZEG00005028085)	ubtd1b (ENSMZEG00005028086)
P. nyererei	MODERN SPECIES	300	csdc2a (ENSPNYG00000004457) #19	aco2 (ENSPNYG00000004399) #17	phf5a (ENSPNYG00000004375) #16	tefa (ENSPNYG00000004348) #15	ZC3H7B (ENSPNYG00000004322) #14	rangap1b (ENSPNYG00000004258) #13	chadlb (ENSPNYG00000004177)	ENSPNYG00000004155	l3mbtl2 (ENSPNYG00000004122) #10	EP300 (ENSPNYG00000004005)	CBX7 (ENSPNYG00000003947)	josd1 (ENSPNYG00000003924)	mrtfab (ENSPNYG00000003895)	ENSPNYG00000003881	desi1b (ENSPNYG00000003863) #21	xrcc6 (ENSPNYG00000003815) #22	get4 (ENSPNYG00000003783)	vps35l (ENSPNYG00000003668)	zdhhc16b (ENSPNYG00000003524)	mms19 (ENSPNYG00000003347)	ubtd1b (ENSPNYG00000003316)	ENSPNYG00000003239	rbp3 (ENSPNYG00000003198)	RBP3 (ENSPNYG00000003191)	gdf2 (ENSPNYG00000003188)	gdf10b (ENSPNYG00000003071)	ENSPNYG00000003040	mapk8b (ENSPNYG00000003014)	ARHGAP22 (ENSPNYG00000002976)	tomm22 (ENSPNYG00000002966)	ENSPNYG00000002955
Burton s mouthbrooder	MODERN SPECIES	507							chadlb (ENSHBUG00000022961)	ENSHBUG00000022986	l3mbtl2 (ENSHBUG00000023020) #10	EP300 (ENSHBUG00000023127)	ENSHBUG00000023150	josd1 (ENSHBUG00000023156)	mrtfab (ENSHBUG00000023207)	ENSHBUG00000023228	desi1b (ENSHBUG00000023264) #21	xrcc6 (ENSHBUG00000023281) #22	get4 (ENSHBUG00000023309)	vps35l (ENSHBUG00000023516)	zdhhc16b (ENSHBUG00000023543)	mms19 (ENSHBUG00000023560)	ubtd1b (ENSHBUG00000023588)	ENSHBUG00000023696	rbp3 (ENSHBUG00000023727)	RBP3 (ENSHBUG00000023733)	gdf2 (ENSHBUG00000023740)	gdf10b (ENSHBUG00000023745)	ENSHBUG00000023769	mapk8b (ENSHBUG00000001463)	ARHGAP22 (ENSHBUG00000001470)	tomm22 (ENSHBUG00000001472)	dmc1 (ENSHBUG00000001514)
Lyretail cichlid	MODERN SPECIES	475	csdc2a (ENSNBRG00000004848) #19	aco2 (ENSNBRG00000004766) #17	phf5a (ENSNBRG00000004747) #16	tefa (ENSNBRG00000004722) #15	ZC3H7B (ENSNBRG00000004708) #14	rangap1b (ENSNBRG00000004652) #13	chadlb (ENSNBRG00000004619)	ENSNBRG00000004606	l3mbtl2 (ENSNBRG00000004591) #10	EP300 (ENSNBRG00000004472)	ENSNBRG00000004419	josd1 (ENSNBRG00000004396)	mrtfab (ENSNBRG00000004360)	ENSNBRG00000004339	desi1b (ENSNBRG00000004326) #21	xrcc6 (ENSNBRG00000004125) #22	get4 (ENSNBRG00000004065)	vps35l (ENSNBRG00000003968)	zdhhc16b (ENSNBRG00000003955)	mms19 (ENSNBRG00000003847)	ubtd1b (ENSNBRG00000003815)	ENSNBRG00000003741	rbp3 (ENSNBRG00000003723)	RBP3 (ENSNBRG00000003715)	gdf2 (ENSNBRG00000003709)	gdf10b (ENSNBRG00000003592)	ENSNBRG00000003560	ENSNBRG00000003515	mapk8b (ENSNBRG00000003479)	ARHGAP22 (ENSNBRG00000003393)	tomm22 (ENSNBRG00000003368)
Nile tilapia	MODERN SPECIES	20	phf5a (ENSONIG00000040142) #16	tefa (ENSONIG00000019694) #15	ENSONIG00000036143	ZC3H7B (ENSONIG00000019695) #14	rangap1b (ENSONIG00000019697) #13	chadlb (ENSONIG00000031087)	chadlb (ENSONIG00000019699)	ENSONIG00000030167	l3mbtl2 (ENSONIG00000019700) #10	EP300 (ENSONIG00000019702)	cbx7 (ENSONIG00000040830)	josd1 (ENSONIG00000019707)	mrtfab (ENSONIG00000019711)	ENSONIG00000038912	desi1b (ENSONIG00000019714) #21	xrcc6 (ENSONIG00000019715) #22	ENSONIG00000030173	get4 (ENSONIG00000019718)	vps35l (ENSONIG00000019720)	zdhhc16b (ENSONIG00000029550)	mms19 (ENSONIG00000019726)	ubtd1b (ENSONIG00000019734)	ENSONIG00000019735	rbp3 (ENSONIG00000033972)	RBP3 (ENSONIG00000027956)	gdf2 (ENSONIG00000019741)	gdf10b (ENSONIG00000019742)	ENSONIG00000029518	ENSONIG00000035831	ENSONIG00000033400	mapk8b (ENSONIG00000019745)
Midas cichlid	MODERN SPECIES	194	csdc2a (ENSACIG00000021654) #19	aco2 (ENSACIG00000021636) #17	phf5a (ENSACIG00000021628) #16	tefa (ENSACIG00000021613) #15	ZC3H7B (ENSACIG00000021548) #14	rangap1b (ENSACIG00000021521) #13	chadlb (ENSACIG00000021497)	ENSACIG00000021488 #10	ENSACIG00000021474	ENSACIG00000021411	ENSACIG00000021398	josd1 (ENSACIG00000021386)	mrtfab (ENSACIG00000021331)	ENSACIG00000021313	desi1b (ENSACIG00000021296) #21	xrcc6 (ENSACIG00000021277) #22	get4 (ENSACIG00000021253)	vps35l (ENSACIG00000021198)	zdhhc16b (ENSACIG00000021174)	mms19 (ENSACIG00000021123)	ubtd1b (ENSACIG00000021104)	ENSACIG00000021047	rbp3 (ENSACIG00000021020)	RBP3 (ENSACIG00000021015)	gdf2 (ENSACIG00000021008)	gdf10b (ENSACIG00000020952)	ENSACIG00000020917	ENSACIG00000020902	ENSACIG00000020893	FRMPD2 (ENSACIG00000020853)	mapk8b (ENSACIG00000020826)
Pinecone sodierfish	MODERN SPECIES	10	NT5M (ENSMMDG00005010239)	rasd1 (ENSMMDG00005010236)	PEMT (ENSMMDG00005010234)	RAB26 (ENSMMDG00005010233)	LMF1 (ENSMMDG00005010230)	sox8a (ENSMMDG00005009860)	ENSMMDG00005009799	COX19 (ENSMMDG00005009791)	ENSMMDG00005009789	RNPS1 (ENSMMDG00005009788)	ENSMMDG00005009785	ENSMMDG00005009784	mrtfab (ENSMMDG00005009780)	ENSMMDG00005009776	desi1b (ENSMMDG00005009775) #21	xrcc6 (ENSMMDG00005009465) #22	josd1 (ENSMMDG00005009447)	CBX7 (ENSMMDG00005009442)	EP300 (ENSMMDG00005007777)	l3mbtl2 (ENSMMDG00005007754) #10	chadlb (ENSMMDG00005007750)	rangap1b (ENSMMDG00005007732) #13	ZC3H7B (ENSMMDG00005007730) #14	tefa (ENSMMDG00005007728) #15	phf5a (ENSMMDG00005007725) #16	aco2 (ENSMMDG00005007589) #17	ENSMMDG00005007581	csdc2a (ENSMMDG00005007576) #19	ENSMMDG00005007543	ENSMMDG00005007532	PLBD1 (ENSMMDG00005007527)
Cod	MODERN SPECIES	9	lipf (ENSGMOG00000011520)	rnls (ENSGMOG00000011528)	ENSGMOG00000011772	atad1b (ENSGMOG00000011547)	minpp1b (ENSGMOG00000011556)	asah2 (ENSGMOG00000030487)	ENSGMOG00000018943	ENSGMOG00000029012	dkk1b (ENSGMOG00000037157)	noc3l (ENSGMOG00000007458)	ENSGMOG00000007474	ENSGMOG00000023741	ENSGMOG00000033808	ENSGMOG00000013318 #16	ENSGMOG00000013551	xrcc6 (ENSGMOG00000013524) #22	ENSGMOG00000024672	josd1 (ENSGMOG00000024543)	ENSGMOG00000013491	ENSGMOG00000013440	l3mbtl2 (ENSGMOG00000013428) #10	chadlb (ENSGMOG00000013414)	rangap1b (ENSGMOG00000013380) #13	ZC3H7B (ENSGMOG00000013351) #14	tefa (ENSGMOG00000028335) #15	aco2 (ENSGMOG00000001946) #17	csdc2a (ENSGMOG00000023085) #19	ENSGMOG00000013257	ENSGMOG00000013246	ENSGMOG00000013233	cby1 (ENSGMOG00000013225)
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00940000158031.c	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b.a	ENSGT00940000156486	ENSGT00390000004010.a.b.a.b	ENSGT00390000013648	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b	ENSGT00390000018570.a.a.a	ENSGT00390000016123	ENSGT00940000157839	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	424													ENSGT00950000182979.a.a.a.b.c	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #21	ENSGT00940000153239.B.e #22	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e	ENSGT00940000153840.a.b.d.b #10	ENSGT00390000018542.a.a.f.a #14	ENSGT00940000156578.a.b.f #15	ENSGT00390000018518.hb.a #16	ENSGT00940000154892.m.b.c #17	ENSGT00390000000022.b.b.a #19	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT00940000158031.c	ENSGT00940000154208.c.b.a	ENSGT00940000153496.a.b.a.d.a	ENSGT00940000156486.e	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #21	ENSGT00940000153239.B.e #22	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e	ENSGT00940000153840.a.b.d.a.b #10	ENSGT00390000018542.a.a.f.a #14	ENSGT00940000156578.a.b.f #15	ENSGT00390000018518.hb.a #16	ENSGT00390000018518.ib #16	ENSGT00940000154892.m.b.c #17	ENSGT00390000000022.b.b.a #19	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e
Salmo	ANCESTRAL SPECIES	31	ENSGT00940000158031.c	ENSGT00940000154208.c.b.a	ENSGT00940000153496.a.b.a.d.a	ENSGT00940000156486.e	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00990000211426	ENSGT00950000182774.b.b.a.b.a	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #21	ENSGT00940000153239.B.e #22	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e	ENSGT00940000156578.a.b.f #15	ENSGT00390000018518.hb.a #16	ENSGT00390000018518.ib #16	ENSGT00940000154892.m.b.c #17	ENSGT00390000000022.b.b.a #19	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e
River trout	MODERN SPECIES	1	ENSSTUG00000031204	tob1b (ENSSTUG00000031207)	ENSSTUG00000031240	DAGLB (ENSSTUG00000032465)	ENSSTUG00000032847	ENSSTUG00000032868	kdelr2b (ENSSTUG00000032886)	ENSSTUG00000032899	ENSSTUG00000032910	CDR2 (ENSSTUG00000032936)	polr3e (ENSSTUG00000032948)	eef2k (ENSSTUG00000033025)	mrtfab (ENSSTUG00000033097)	ENSSTUG00000033172	desi1b (ENSSTUG00000033183) #21	xrcc6 (ENSSTUG00000033204) #22	josd1 (ENSSTUG00000033281)	ENSSTUG00000033286	EP300 (ENSSTUG00000033350)	tefa (ENSSTUG00000034930) #15	phf5a (ENSSTUG00000034944) #16	phf5a (ENSSTUG00000034968) #16	aco2 (ENSSTUG00000034984) #17	CSDC2 (ENSSTUG00000035168) #19	ENSSTUG00000035217	ENSSTUG00000036141	cby1 (ENSSTUG00000036165)	pdap1a (ENSSTUG00000036174)	ENSSTUG00000036200	ENSSTUG00000036259	ENSSTUG00000036276
Atlantic salmon	MODERN SPECIES	20	ENSSSAG00000088503	TOB1 (ENSSSAG00000078507)	ENSSSAG00000078566	ENSSSAG00000089417	ENSSSAG00000079623	kdelr2b (ENSSSAG00000093584)	ENSSSAG00000090574	ENSSSAG00000079634	ENSSSAG00000079637	CDR2 (ENSSSAG00000079643)	polr3e (ENSSSAG00000079653)	EEF2K (ENSSSAG00000079744)	ENSSSAG00000079798	ENSSSAG00000079804	desi1b (ENSSSAG00000115637) #21	xrcc6 (ENSSSAG00000079807) #22	josd1 (ENSSSAG00000121535)	ENSSSAG00000097592	ENSSSAG00000008899	tefa (ENSSSAG00000091389) #15	phf5a (ENSSSAG00000010141) #16	aco2 (ENSSSAG00000010173) #17	ENSSSAG00000010339	kcd17 (ENSSSAG00000013118)	cby1 (ENSSSAG00000013753)	HAP28 (ENSSSAG00000014223)	ENSSSAG00000014741	ENSSSAG00000015209	ENSSSAG00000098329	csnk1e (ENSSSAG00000111738)	tmem184ba (ENSSSAG00000088734)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000158031.c	ENSGT00940000154208.c.b.a	ENSGT00940000153496.a.b.a.d.a	ENSGT00940000156486.e	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #21	ENSGT00940000153239.B.e #22	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e	ENSGT00940000153840.a.b.d.a.b #10	ENSGT00390000018542.a.a.f.a #14	ENSGT00940000156578.a.b.f #15	ENSGT00390000018518.hb.a #16	ENSGT00940000154892.m.b.c #17	ENSGT00390000000022.b.b.a #19	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000022370	ENSOMYG00000022331	ENSOMYG00000020950	ENSOMYG00000061952	DHX8 (ENSOMYG00000020305)	ENSOMYG00000017863	meox1 (ENSOMYG00000017853)	ENSOMYG00000053297	ENSOMYG00000017846	ENSOMYG00000063210	ENSOMYG00000017828	ENSOMYG00000017552	ENSOMYG00000017414	ENSOMYG00000017381	desi1b (ENSOMYG00000017395) #21	xrcc6 (ENSOMYG00000017357) #22	josd1 (ENSOMYG00000017332)	ENSOMYG00000017328	ENSOMYG00000016994	l3mbtl2 (ENSOMYG00000055655) #10	ENSOMYG00000072442 #14	tefa (ENSOMYG00000016891) #15	phf5a (ENSOMYG00000016861) #16	aco2 (ENSOMYG00000016376) #17	ENSOMYG00000016354 #19	ENSOMYG00000069177	ENSOMYG00000015952	ENSOMYG00000059884	ENSOMYG00000015861	cby1 (ENSOMYG00000015849)	pdap1a (ENSOMYG00000015825)
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000158031.c	ENSGT00940000154208.c.b.a	ENSGT00940000153496.a.b.a.d.a	ENSGT00940000156486.e	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT01010000230123	ENSGT00950000182774.b.b.a.b.a	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #21	ENSGT00940000153239.B.e #22	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e	ENSGT00940000156578.a.b.f #15	ENSGT00390000018518.hb.a #16	ENSGT00390000018518.ib #16	ENSGT00940000154892.m.b.c #17	ENSGT00390000000022.b.b.a #19	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e
Chinook salmon	MODERN SPECIES	17	ENSOTSG00005012697	ENSOTSG00005043282	ENSOTSG00005043299	tob1b (ENSOTSG00005043304)	ENSOTSG00005043328	DAGLB (ENSOTSG00005044123)	ENSOTSG00005044213	ENSOTSG00005044214	kdelr2b (ENSOTSG00005044215)	ENSOTSG00005044216	ENSOTSG00005044217	ENSOTSG00005044218	polr3e (ENSOTSG00005044219)	ENSOTSG00005044281	desi1b (ENSOTSG00005044282) #21	xrcc6 (ENSOTSG00005044285) #22	josd1 (ENSOTSG00005044288)	CBX7 (ENSOTSG00005044289)	EP300 (ENSOTSG00005044301)	tefa (ENSOTSG00005044952) #15	phf5a (ENSOTSG00005044953) #16	aco2 (ENSOTSG00005044960) #17	ENSOTSG00005045150	ENSOTSG00005045182	cby1 (ENSOTSG00005045183)	pdap1a (ENSOTSG00005045184)	ENSOTSG00005045185	ENSOTSG00005045186	ENSOTSG00005045187	csnk1e (ENSOTSG00005045188)	tmem184ba (ENSOTSG00005045191)
Coho salmon	MODERN SPECIES	17	ENSOKIG00005050492	tob1b (ENSOKIG00005050493)	ENSOKIG00005050522	DAGLB (ENSOKIG00005050558)	ENSOKIG00005050578	ENSOKIG00005050581	kdelr2b (ENSOKIG00005050586)	ENSOKIG00005050590	ENSOKIG00005050596	CDR2 (ENSOKIG00005050601)	polr3e (ENSOKIG00005050614)	EEF2K (ENSOKIG00005050633)	mrtfab (ENSOKIG00005050650)	ENSOKIG00005050660	desi1b (ENSOKIG00005050661) #21	xrcc6 (ENSOKIG00005050664) #22	josd1 (ENSOKIG00005050666)	CBX7 (ENSOKIG00005050669)	EP300 (ENSOKIG00005050700)	phf5a (ENSOKIG00005050747) #16	tefa (ENSOKIG00005050753) #15	aco2 (ENSOKIG00005050764) #17	CSDC2 (ENSOKIG00005050769) #19	ENSOKIG00005050779	ENSOKIG00005050789	cby1 (ENSOKIG00005050792)	pdap1a (ENSOKIG00005050795)	ENSOKIG00005050796	ENSOKIG00005006234	ENSOKIG00005006253	csnk1e (ENSOKIG00005006292)
Huchen	MODERN SPECIES	288														ENSHHUG00000046850	desi1b (ENSHHUG00000046855) #21	xrcc6 (ENSHHUG00000046863) #22	josd1 (ENSHHUG00000046896)	ENSHHUG00000046898	EP300 (ENSHHUG00000046937)	ENSHHUG00000047060 #10	ENSHHUG00000047079	ENSHHUG00000047084	ENSHHUG00000047086	ENSHHUG00000047089 #14	tefa (ENSHHUG00000047095) #15	phf5a (ENSHHUG00000047108) #16	aco2 (ENSHHUG00000047122) #17	ENSHHUG00000047159	CSDC2 (ENSHHUG00000047162) #19	ENSHHUG00000047164	ENSHHUG00000047173
Salmoninae	ANCESTRAL SPECIES	147														ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #21	ENSGT00940000153239.B.f #22	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f	ENSGT00940000153840.a.b.c #10	ENSGT00940000153840.a.b.d.a.a #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a.f.b #14	ENSGT00940000156578.a.b.e #15	ENSGT00390000018518.hb.b #16	ENSGT00940000154892.m.b.d #17	ENSGT00390000000022.b.b.b #19	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a
Huchen	MODERN SPECIES	3796															desi1b (ENSHHUG00000042788) #21	xrcc6 (ENSHHUG00000042730) #22	ENSHHUG00000042728	josd1 (ENSHHUG00000042718)	ENSHHUG00000042715	EP300 (ENSHHUG00000042713)
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000156486.f	ENSGT00400000022326.b.a.b.a.b.a.a.b	ENSGT00400000022326.b.a.b.a.b.a.b	ENSGT00840000130048	ENSGT00390000004010.a.b.a.b.d	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #21	ENSGT00940000153239.B.f #22	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f	ENSGT00940000153840.a.b.d.a.a #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a.f.b #14	ENSGT00940000156578.a.b.e #15	ENSGT00390000018518.hb.b #16	ENSGT00940000154892.m.b.d #17	ENSGT00390000000022.b.b.b #19	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h
Salmo	ANCESTRAL SPECIES	23	ENSGT00400000022326.b.a.b.a.b.a.a.b	ENSGT00400000022326.b.a.b.a.b.a.b	ENSGT00390000004010.a.b.a.b.d	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT01100000263491.a.b.a.a.b.b.a	ENSGT00400000022326.b.a.b.a.b.a.a.a	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #21	ENSGT00940000153239.B.f #22	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f	ENSGT00940000153840.a.b.c #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a.f.b #14	ENSGT00940000156578.a.b.e #15	ENSGT00390000018518.hb.b #16	ENSGT00940000154892.m.b.d #17	ENSGT00390000000022.b.b.b #19	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h
Atlantic salmon	MODERN SPECIES		kdelr2b (ENSSSAG00000106651)	mettl9 (ENSSSAG00000001523)	ENSSSAG00000001526	ENSSSAG00000001531	ENSSSAG00000116975	ENSSSAG00000116752	ENSSSAG00000001538	ENSSSAG00000092741	CDR2 (ENSSSAG00000088344)	ENSSSAG00000001561	ENSSSAG00000088707	eef2k (ENSSSAG00000001615)	ENSSSAG00000001654	ENSSSAG00000091473	desi1b (ENSSSAG00000090604) #21	xrcc6 (ENSSSAG00000001692) #22	ENSSSAG00000105775	josd1 (ENSSSAG00000115290)	ENSSSAG00000118777	ENSSSAG00000001794	l3mbtl2 (ENSSSAG00000001922) #10	chadlb (ENSSSAG00000002125)	rangap1b (ENSSSAG00000002137) #13	ZC3H7B (ENSSSAG00000002171) #14	tef (ENSSSAG00000002242) #15	PHF5A (ENSSSAG00000002272) #16	aco2 (ENSSSAG00000002315) #17	csdc2a (ENSSSAG00000002399) #19	ENSSSAG00000002491	ENSSSAG00000002780	ENSSSAG00000002830
River trout	MODERN SPECIES	9	ENSSTUG00000031923	ENSSTUG00000031941	kdelr2b (ENSSTUG00000031949)	mettl9 (ENSSTUG00000031974)	ENSSTUG00000031990	ENSSTUG00000031994	ENSSTUG00000031999	ENSSTUG00000032011	CDR2 (ENSSTUG00000032030)	polr3e (ENSSTUG00000032076)	eef2k (ENSSTUG00000033337)	tha1 (ENSSTUG00000033376)	ENSSTUG00000033391	mrtfab (ENSSTUG00000033398)	desi1b (ENSSTUG00000033425) #21	xrcc6 (ENSSTUG00000033443) #22	ENSSTUG00000033802	ENSSTUG00000033810	josd1 (ENSSTUG00000033853)	ENSSTUG00000033872	EP300 (ENSSTUG00000033907)	l3mbtl2 (ENSSTUG00000034401) #10	chadlb (ENSSTUG00000034453)	rangap1b (ENSSTUG00000034462) #13	ZC3H7B (ENSSTUG00000034512) #14	tefa (ENSSTUG00000034592) #15	phf5a (ENSSTUG00000034623) #16	aco2 (ENSSTUG00000034674) #17	CSDC2 (ENSSTUG00000035962) #19	GUCY2C (ENSSTUG00000035978)	ENSSTUG00000036305
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000156486.f	ENSGT00400000022326.b.a.b.a.b.a.a.b	ENSGT00400000022326.b.a.b.a.b.a.b	ENSGT00840000130048	ENSGT00390000004010.a.b.a.b.d	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #21	ENSGT00940000153239.B.f #22	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f	ENSGT00940000153840.a.b.d.a.a #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a.f.b #14	ENSGT00940000156578.a.b.e #15	ENSGT00390000018518.hb.b #16	ENSGT00940000154892.m.b.d #17	ENSGT00390000000022.b.b.b #19	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h
Rainbow trout	MODERN SPECIES	15	kdelr2b (ENSOMYG00000044545)	ENSOMYG00000044550	ENSOMYG00000044554	ENSOMYG00000068091	ENSOMYG00000044563	ENSOMYG00000044568	ENSOMYG00000048942	CDR2 (ENSOMYG00000044576)	ENSOMYG00000044581	ENSOMYG00000044584	EEF2K (ENSOMYG00000044604)	ENSOMYG00000044616	mrtfab (ENSOMYG00000044624)	ENSOMYG00000073573	desi1b (ENSOMYG00000044645) #21	xrcc6 (ENSOMYG00000044661) #22	josd1 (ENSOMYG00000044704)	ENSOMYG00000044706	ENSOMYG00000044715	l3mbtl2 (ENSOMYG00000044742) #10	chadlb (ENSOMYG00000044762)	rangap1b (ENSOMYG00000044802) #13	ZC3H7B (ENSOMYG00000044864) #14	tefa (ENSOMYG00000044872) #15	phf5a (ENSOMYG00000044879) #16	aco2 (ENSOMYG00000044954) #17	ENSOMYG00000045437 #19	ENSOMYG00000065029	ENSOMYG00000069439	ENSOMYG00000045501	ENSOMYG00000045626
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000153496.a.b.a.d.b	ENSGT00940000156486.f	ENSGT00400000022326.b.a.b.a.b.a.a.b	ENSGT00400000022326.b.a.b.a.b.a.b	ENSGT00390000004010.a.b.a.b.d	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #21	ENSGT00940000153239.B.f #22	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f	ENSGT00940000153840.a.b.d.a.a #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a.f.b #14	ENSGT00940000156578.a.b.e #15	ENSGT00390000018518.hb.b #16	ENSGT00940000154892.m.b.d #17	ENSGT00390000000022.b.b.b #19	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h
Chinook salmon	MODERN SPECIES		ENSOTSG00005014028	ENSOTSG00005014029	kdelr2b (ENSOTSG00005014031)	mettl9 (ENSOTSG00005014032)	ENSOTSG00005014033	ENSOTSG00005014034	ENSOTSG00005014035	CDR2 (ENSOTSG00005014036)	polr3e (ENSOTSG00005014038)	eef2k (ENSOTSG00005014062)	tha1 (ENSOTSG00005014068)	ENSOTSG00005014069	mrtfab (ENSOTSG00005014071)	ENSOTSG00005014074	desi1b (ENSOTSG00005014077) #21	xrcc6 (ENSOTSG00005014078) #22	josd1 (ENSOTSG00005014101)	ENSOTSG00005014103	EP300 (ENSOTSG00005014113)	l3mbtl2 (ENSOTSG00005014144) #10	chadlb (ENSOTSG00005014302)	ENSOTSG00005014303	ENSOTSG00005014305	RANGAP1 (ENSOTSG00005014308) #13	ZC3H7B (ENSOTSG00005014316) #14	tefa (ENSOTSG00005014317) #15	phf5a (ENSOTSG00005014318) #16	aco2 (ENSOTSG00005014323) #17	CSDC2 (ENSOTSG00005017611) #19	ENSOTSG00005017639	ENSOTSG00005021719
Coho salmon	MODERN SPECIES	2	ENSOKIG00005007391	kdelr2b (ENSOKIG00005007374)	mettl9 (ENSOKIG00005007355)	ENSOKIG00005007348	ENSOKIG00005007337	ENSOKIG00005007343	ENSOKIG00005007329	CDR2 (ENSOKIG00005007306)	ENSOKIG00005007282	POLR3E (ENSOKIG00005007240)	eef2k (ENSOKIG00005007171)	tha1 (ENSOKIG00005007124)	ENSOKIG00005007067	ENSOKIG00005007041	desi1b (ENSOKIG00005007029) #21	xrcc6 (ENSOKIG00005006924) #22	ENSOKIG00005006896	josd1 (ENSOKIG00005006888)	ENSOKIG00005006878	EP300 (ENSOKIG00005005140)	l3mbtl2 (ENSOKIG00005004839) #10	chadlb (ENSOKIG00005004813)	rangap1b (ENSOKIG00005004716) #13	ZC3H7B (ENSOKIG00005004689) #14	tefa (ENSOKIG00005004663) #15	phf5a (ENSOKIG00005004637) #16	aco2 (ENSOKIG00005003655) #17	CSDC2 (ENSOKIG00005003568) #19	ENSOKIG00005002499	ENSOKIG00005002241	PLBD1 (ENSOKIG00005002045)
Northern pike	MODERN SPECIES	4	DAGLB (ENSELUG00000020824)	ENSELUG00000020812	ENSELUG00000020794	ENSELUG00000032053	kdelr2b (ENSELUG00000020755)	mettl9 (ENSELUG00000020737)	ENSELUG00000020703	ENSELUG00000028258	CDR2 (ENSELUG00000033724)	polr3e (ENSELUG00000020683)	eef2k (ENSELUG00000000906)	tha1 (ENSELUG00000020367)	mrtfab (ENSELUG00000020339)	ENSELUG00000020324	desi1b (ENSELUG00000020313) #21	xrcc6 (ENSELUG00000020301) #22	josd1 (ENSELUG00000020267)	ENSELUG00000020028	EP300 (ENSELUG00000020189)	l3mbtl2 (ENSELUG00000019986) #10	chadlb (ENSELUG00000019959)	rangap1b (ENSELUG00000019942) #13	ZC3H7B (ENSELUG00000019891) #14	tefa (ENSELUG00000019815) #15	phf5a (ENSELUG00000019796) #16	aco2 (ENSELUG00000019769) #17	CSDC2 (ENSELUG00000019696) #19	ENSELUG00000019680	ENSELUG00000019633	PLBD1 (ENSELUG00000019605)	cby1 (ENSELUG00000019580)
Otomorpha	ANCESTRAL SPECIES	1	ENSGT00390000018292.c	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.n #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Clupeiformes	ANCESTRAL SPECIES	5	ENSGT00390000018292.c	ENSGT00950000182832.A	ENSGT00940000161032	ENSGT00940000157457	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00390000018542.a.a #14	ENSGT00940000156578.a.b #15	ENSGT00390000018518 #16	ENSGT00940000154892.m.b #17	ENSGT00390000000022.b.a.b #19	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h
Denticle herring	MODERN SPECIES	18	neurl2 (ENSDCDG00000029338)	msrb1b (ENSDCDG00000029333)	mlst8 (ENSDCDG00000029298)	bricd5 (ENSDCDG00000029294)	pgp (ENSDCDG00000029291)	zdhhc4 (ENSDCDG00000029287)	grid2ipb (ENSDCDG00000029212)	arhgap17a (ENSDCDG00000029142)	snx11 (ENSDCDG00000029135)	slc16a6a (ENSDCDG00000029132)	ENSDCDG00000029128	gna13a (ENSDCDG00000029125)	rgs9b (ENSDCDG00000028322)	mrtfab (ENSDCDG00000028306)	ENSDCDG00000028304	xrcc6 (ENSDCDG00000028302) #22	josd1 (ENSDCDG00000028300)	ENSDCDG00000028297	EP300 (ENSDCDG00000028292)	l3mbtl2 (ENSDCDG00000028289) #10	chadlb (ENSDCDG00000028284)	ZC3H7B (ENSDCDG00000028270) #14	tefa (ENSDCDG00000028260) #15	phf5a (ENSDCDG00000028255) #16	ENSDCDG00000028244	cby1 (ENSDCDG00000028242)	pdap1a (ENSDCDG00000028241)	ENSDCDG00000028239	ENSDCDG00000028237	ENSDCDG00000028236	memo1 (ENSDCDG00000028225)
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000014869	hoxb5b (ENSCHAG00000014851)	hoxb6b (ENSCHAG00000014833)	ENSCHAG00000013917	stx4 (ENSCHAG00000013907)	ENSCHAG00000013891	snx11 (ENSCHAG00000013883)	arsg (ENSCHAG00000013856)	slc16a6a (ENSCHAG00000013846)	AMZ2 (ENSCHAG00000013631)	gna13a (ENSCHAG00000013606)	rgs9b (ENSCHAG00000012811)	mrtfab (ENSCHAG00000012744)	ENSCHAG00000012726	desi1b (ENSCHAG00000012716) #21	xrcc6 (ENSCHAG00000012490) #22	ENSCHAG00000012482	josd1 (ENSCHAG00000012467)	ENSCHAG00000012460	EP300 (ENSCHAG00000010123)	l3mbtl2 (ENSCHAG00000009331) #10	chadlb (ENSCHAG00000009315)	rangap1b (ENSCHAG00000009208) #13	ZC3H7B (ENSCHAG00000009150) #14	tefa (ENSCHAG00000009131) #15	phf5a (ENSCHAG00000009088) #16	ENSCHAG00000009075	aco2 (ENSCHAG00000007164) #17	csdc2a (ENSCHAG00000007095) #19	ENSCHAG00000007018	ENSCHAG00000003753
Otophysi	ANCESTRAL SPECIES		ENSGT00390000018292.c	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.n #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00940000153137.b
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00390000018292.c	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.n #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00940000153137.b
Channel catfish	MODERN SPECIES	4	MSL1 (ENSIPUG00000019670)	gip (ENSIPUG00000000548)	snf8 (ENSIPUG00000000554)	calcoco2 (ENSIPUG00000000608)	STX4 (ENSIPUG00000000613)	ENSIPUG00000000624	snx11 (ENSIPUG00000000637)	arsg (ENSIPUG00000000690)	slc16a6 (ENSIPUG00000000700)	AMZ2 (ENSIPUG00000000701)	GNA13 (ENSIPUG00000000718)	rgs9b (ENSIPUG00000000729)	mrtfab (ENSIPUG00000000739)	ENSIPUG00000000754	desi1b (ENSIPUG00000000760) #21	xrcc6 (ENSIPUG00000000767) #22	josd1 (ENSIPUG00000000780)	ENSIPUG00000000790	ENSIPUG00000000795	EP300 (ENSIPUG00000000806)	l3mbtl2 (ENSIPUG00000000886) #10	chadl (ENSIPUG00000000903)	rangap1b (ENSIPUG00000000910) #13	kctd17 (ENSIPUG00000001013)	GUCY2C (ENSIPUG00000001043)	CSDC2 (ENSIPUG00000001089) #19	aco2 (ENSIPUG00000001101) #17	phf5a (ENSIPUG00000001222) #16	TEF (ENSIPUG00000001239) #15	ENSIPUG00000001283 #14	cby1 (ENSIPUG00000001373)
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT00390000018292.c	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.n #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00940000153137.b
Electric eel	MODERN SPECIES	94	gip (ENSEEEG00000011569)	snf8 (ENSEEEG00000011564)	calcoco2 (ENSEEEG00000011561)	stx4 (ENSEEEG00000011559)	ENSEEEG00000011557	snx11 (ENSEEEG00000011554)	arsg (ENSEEEG00000011549)	slc16a6a (ENSEEEG00000011538)	AMZ2 (ENSEEEG00000011533)	gna13a (ENSEEEG00000011519)	rgs9b (ENSEEEG00000011513)	rgs9b (ENSEEEG00000011512)	mrtfab (ENSEEEG00000011506)	ENSEEEG00000011503	desi1b (ENSEEEG00000011501) #21	xrcc6 (ENSEEEG00000011488) #22	josd1 (ENSEEEG00000011487)	ENSEEEG00000011486	l3mbtl2 (ENSEEEG00000011299) #10	chadlb (ENSEEEG00000011292)	rangap1b (ENSEEEG00000011276) #13	ENSEEEG00000011272	GUCY2C (ENSEEEG00000011149)	csdc2a (ENSEEEG00000011143) #19	aco2 (ENSEEEG00000011123) #17	phf5a (ENSEEEG00000011117) #16	tefa (ENSEEEG00000011115) #15	ZC3H7B (ENSEEEG00000011114) #14	cby1 (ENSEEEG00000011111)	pdap1a (ENSEEEG00000011110)	ENSEEEG00000011049
Characoidei	ANCESTRAL SPECIES	6	ENSGT00390000018292.c	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13
Red-bellied piranha	MODERN SPECIES	632	gip (ENSPNAG00000013374)	snf8 (ENSPNAG00000013400)	calcoco2 (ENSPNAG00000005785)	stx4 (ENSPNAG00000013423)	ENSPNAG00000013435	snx11 (ENSPNAG00000013497)	arsg (ENSPNAG00000002790)	slc16a6a (ENSPNAG00000013523)	AMZ2 (ENSPNAG00000013530)	gna13a (ENSPNAG00000013541)	rgs9b (ENSPNAG00000006125)	mrtfab (ENSPNAG00000002883)	ENSPNAG00000013692	ENSPNAG00000013701	desi1b (ENSPNAG00000013744) #21	xrcc6 (ENSPNAG00000013769) #22
Mexicana tetra	MODERN SPECIES	19	MSL1 (ENSAMXG00000008566)	gip (ENSAMXG00000008541)	snf8 (ENSAMXG00000008509)	calcoco2 (ENSAMXG00000008391)	stx4 (ENSAMXG00000030393)	ENSAMXG00000008153	snx11 (ENSAMXG00000034430)	arsg (ENSAMXG00000007957)	slc16a6a (ENSAMXG00000007885)	AMZ2 (ENSAMXG00000039045)	gna13a (ENSAMXG00000033589)	rgs9b (ENSAMXG00000007688)	mrtfab (ENSAMXG00000007612)	ENSAMXG00000037949	desi1b (ENSAMXG00000030899) #21	xrcc6 (ENSAMXG00000007545) #22	josd1 (ENSAMXG00000034284)	ENSAMXG00000007494	EP300 (ENSAMXG00000007487)	l3mbtl2 (ENSAMXG00000018021) #10	chadlb (ENSAMXG00000007483)	rangap1b (ENSAMXG00000007477) #13	ENSAMXG00000015921	adprm (ENSAMXG00000041518)	adprm (ENSAMXG00000031575)	map2k4b (ENSAMXG00000015804)	MYOCD (ENSAMXG00000036216)	DNAH17 (ENSAMXG00000015711)	SHISA6 (ENSAMXG00000015689)	ENSAMXG00000029479	foxk2a (ENSAMXG00000034378)
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00940000159930.gb	ENSGT00940000159930.fb.a	ENSGT00940000163380	ENSGT00390000005121	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #21	ENSGT00940000153239.B #22	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b	ENSGT00940000153840.a.b #10	ENSGT00940000165277.a	ENSGT00440000039203.i #13	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #19	ENSGT00940000154892.n #17	ENSGT00390000018518 #16	ENSGT00940000156578.a.b #15	ENSGT00390000018542.a.a #14	ENSGT00940000153137.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	231	ENSGT00940000163380	ENSGT00390000005121.d	ENSGT00390000007843.f	ENSGT00950000183025.a.y	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #21	ENSGT00940000153239.B.g #22	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b	ENSGT00940000153840.a.b.i #10	ENSGT00440000039203.i.e #13	ENSGT00940000167326.d	ENSGT00390000000022.b.a.b.a #19	ENSGT00940000154892.n.d #17	ENSGT00390000018518.nb.a #16	ENSGT00940000156578.a.b.b #15	ENSGT00390000018542.a.a.b #14
Cyprininae_a	ANCESTRAL SPECIES	37	ENSGT00940000159930.fb.a.b	ENSGT00390000005121.d	ENSGT00390000007843.f	ENSGT00950000183025.a.y	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #21	ENSGT00940000153239.B.g #22	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b	ENSGT00940000153840.a.b.i #10	ENSGT00940000165277.a.b	ENSGT00440000039203.i.e #13	ENSGT00940000167326.d.b	ENSGT00940000167326.d.a	ENSGT00390000000022.b.a.b.a #19	ENSGT00940000154892.n.d #17	ENSGT00390000018518.nb.a #16	ENSGT00940000156578.a.b.b #15	ENSGT00390000018542.a.a.b #14	ENSGT00940000153137.b.f	ENSGT00940000161934.b
Golden-line barbel	MODERN SPECIES	489	st6galnac1.2 (ENSSGRG00000037312)	ENSSGRG00000037311	gip (ENSSGRG00000037310)	snf8 (ENSSGRG00000037286)	calcoco2 (ENSSGRG00000037285)	stx4 (ENSSGRG00000037266)	ENSSGRG00000037265	snx11 (ENSSGRG00000037264)	ENSSGRG00000037263	SLC16A6 (ENSSGRG00000037262)	gna13a (ENSSGRG00000037261)	rgs9b (ENSSGRG00000037260)	mrtfab (ENSSGRG00000037258)	ENSSGRG00000037257	desi1b (ENSSGRG00000037256) #21	xrcc6 (ENSSGRG00000037163) #22	josd1 (ENSSGRG00000037162)	ENSSGRG00000037161	EP300 (ENSSGRG00000037160)	l3mbtl2 (ENSSGRG00000037078) #10	rangap1b (ENSSGRG00000037033) #13	ENSSGRG00000036992	csdc2a (ENSSGRG00000036991) #19	aco2 (ENSSGRG00000036978) #17	phf5a (ENSSGRG00000036961) #16	tefa (ENSSGRG00000036959) #15	ENSSGRG00000036955 #14	cby1 (ENSSGRG00000036925)	pdap1a (ENSSGRG00000036923)	ENSSGRG00000036905	ENSSGRG00000036904
Common carp reference	MODERN SPECIES	44	st6galnac1.1 (ENSCCRG00000035537)	gip (ENSCCRG00000035541)	snf8 (ENSCCRG00000027996)	calcoco2 (ENSCCRG00000028055)	stx4 (ENSCCRG00000035606)	ENSCCRG00000062006	snx11 (ENSCCRG00000061393)	ENSCCRG00000005511	ENSCCRG00000080966	ENSCCRG00000060983	gna13a (ENSCCRG00000080916)	rgs9b (ENSCCRG00000005354)	mrtfab (ENSCCRG00000053748)	ENSCCRG00000005336	desi1b (ENSCCRG00000069148) #21	xrcc6 (ENSCCRG00000004076) #22	ENSCCRG00000066110	ENSCCRG00000003483	l3mbtl2 (ENSCCRG00000003980) #10	chadlb (ENSCCRG00000069500)	rangap1b (ENSCCRG00000062787) #13	ENSCCRG00000075478	ENSCCRG00000053343	csdc2a (ENSCCRG00000069621) #19	aco2 (ENSCCRG00000026241) #17	phf5a (ENSCCRG00000028979) #16	tefa (ENSCCRG00000047755) #15	ENSCCRG00000047746 #14	cby1 (ENSCCRG00000047735)	slc16a8 (ENSCCRG00000047728)	pdap1a (ENSCCRG00000041388)
Cyprininae	ANCESTRAL SPECIES	36															ENSGT00730000111100.a.b.d #21	ENSGT00940000153239.B.h #22	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a	ENSGT00940000153840.a.b.j #10	ENSGT00940000165277.a	ENSGT00440000039203.i.f #13	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #19	ENSGT00940000154892.n.c #17	ENSGT00390000018518.nb.b #16	ENSGT00940000156578.a.b.a #15	ENSGT00390000018542.a.a.a #14	ENSGT00940000153137.b
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00390000005121.c	ENSGT00390000007843.e	ENSGT00950000183025.a.z	ENSGT01030000234627.a.b.b.d	ENSGT00940000166841.b	ENSGT00940000160113.g	ENSGT00940000159093.e	ENSGT00940000155575.i.a.f	ENSGT00530000063996.a.b	ENSGT00530000063996.a.a.a	ENSGT00940000157054.u.a.b	ENSGT00940000156505.s.c	ENSGT00950000182979.a.a.a.b.b	ENSGT00940000163663.A.b.b	ENSGT00730000111100.a.b.d #21	ENSGT00940000153239.B.h #22	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a	ENSGT00940000153840.a.b.j #10	ENSGT00940000165277.a.a	ENSGT00440000039203.i.f #13	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #19	ENSGT00940000154892.n.c #17	ENSGT00390000018518.nb.b #16	ENSGT00940000156578.a.b.a #15	ENSGT00390000018542.a.a.a #14	ENSGT00940000153137.b.e
Golden-line barbel	MODERN SPECIES	56	st6galnac1.1 (ENSSGRG00000051811)	gip (ENSSGRG00000051813)	snf8 (ENSSGRG00000051815)	calcoco2 (ENSSGRG00000051823)	stx4 (ENSSGRG00000051824)	ENSSGRG00000051825	snx11 (ENSSGRG00000051826)	ENSSGRG00000051827	SLC16A6 (ENSSGRG00000051828)	AMZ2 (ENSSGRG00000051829)	gna13a (ENSSGRG00000051830)	rgs9b (ENSSGRG00000051837)	mrtfab (ENSSGRG00000052071)	ENSSGRG00000052073	desi1b (ENSSGRG00000052074) #21	xrcc6 (ENSSGRG00000052075) #22	josd1 (ENSSGRG00000052117)	ENSSGRG00000052118	EP300 (ENSSGRG00000052125)	l3mbtl2 (ENSSGRG00000052168) #10	chadlb (ENSSGRG00000052269)	ENSSGRG00000052270	rangap1b (ENSSGRG00000052271) #13	ENSSGRG00000052272	GUCY2C (ENSSGRG00000052280)	csdc2a (ENSSGRG00000052301) #19	aco2 (ENSSGRG00000052322) #17	phf5a (ENSSGRG00000052726) #16	phf5a (ENSSGRG00000052728) #16	tefa (ENSSGRG00000052733) #15	ENSSGRG00000052734 #14
Common carp reference	MODERN SPECIES	25	st6galnac1.1 (ENSCCRG00000028074)	gip (ENSCCRG00000028078)	snf8 (ENSCCRG00000080262)	calcoco2 (ENSCCRG00000035600)	stx4 (ENSCCRG00000028059)	ENSCCRG00000028063	snx11 (ENSCCRG00000058183)	arsg (ENSCCRG00000035639)	ENSCCRG00000035666	gna13a (ENSCCRG00000055461)	rgs9b (ENSCCRG00000035685)	mrtfab (ENSCCRG00000054456)	ENSCCRG00000005356	ENSCCRG00000059677	desi1b (ENSCCRG00000071135) #21	xrcc6 (ENSCCRG00000074154) #22	ENSCCRG00000068559	ENSCCRG00000057202	l3mbtl2 (ENSCCRG00000035778) #10	chadlb (ENSCCRG00000035780)	rangap1b (ENSCCRG00000035782) #13	ENSCCRG00000035794	ENSCCRG00000059199	ENSCCRG00000035904	csdc2a (ENSCCRG00000026211) #19	aco2 (ENSCCRG00000029008) #17	phf5a (ENSCCRG00000054725) #16	tefa (ENSCCRG00000029207) #15	ENSCCRG00000029231 #14	cby1 (ENSCCRG00000029247)	slc16a8 (ENSCCRG00000029249)
Goldfish	MODERN SPECIES	3	birc5a (ENSCARG00000003169)	TMEM235 (ENSCARG00000003175)	tha1 (ENSCARG00000003180)	socs3b (ENSCARG00000003201)	PGS1 (ENSCARG00000003207)	cyth1b (ENSCARG00000003240)	HTR7 (ENSCARG00000003268)	ENSCARG00000003277	rpp30 (ENSCARG00000003300)	ankrd1b (ENSCARG00000003339)	pcgf5b (ENSCARG00000003346)	HECTD2 (ENSCARG00000003356)	ppp1r3cb (ENSCARG00000003367)	ENSCARG00000003376	desi1b (ENSCARG00000003378) #21	xrcc6 (ENSCARG00000003391) #22	josd1 (ENSCARG00000003441)	ENSCARG00000003445	EP300 (ENSCARG00000003476)	l3mbtl2 (ENSCARG00000003695) #10	chadlb (ENSCARG00000004193)	rangap1b (ENSCARG00000004218) #13	ENSCARG00000004343	ENSCARG00000004424	GUCY2C (ENSCARG00000004615)	csdc2a (ENSCARG00000006872) #19	aco2 (ENSCARG00000006902) #17	phf5a (ENSCARG00000007284) #16	tefa (ENSCARG00000007309) #15	ENSCARG00000007330 #14	cby1 (ENSCARG00000007430)
Zebrafish	MODERN SPECIES	3	ENSDARG00000078132	neurl2 (ENSDARG00000062446)	MEIOB (ENSDARG00000062442)	msrb1b (ENSDARG00000045160)	mlst8 (ENSDARG00000003167)	bricd5 (ENSDARG00000056247)	ENSDARG00000114422	pgp (ENSDARG00000029695)	zdhhc4 (ENSDARG00000045159)	grid2ipb (ENSDARG00000095603)	ENSDARG00000045157	rgs9b (ENSDARG00000045156)	mrtfab (ENSDARG00000076229)	ENSDARG00000088204	desi1b (ENSDARG00000089529) #21	xrcc6 (ENSDARG00000071551) #22	josd1 (ENSDARG00000071548)	CBX7 (ENSDARG00000087181)	EP300 (ENSDARG00000100666)	l3mbtl2 (ENSDARG00000056079) #10	chadlb (ENSDARG00000075903)	rangap1b (ENSDARG00000056059) #13	PLBD1 (ENSDARG00000076015)	ENSDARG00000056050	ENSDARG00000056045	csdc2a (ENSDARG00000041323) #19	aco2 (ENSDARG00000007294) #17	phf5a (ENSDARG00000045155) #16	tefa (ENSDARG00000039117) #15	ZC3H7B (ENSDARG00000055930) #14	cby1 (ENSDARG00000077409)
Osteoglossiformes	ANCESTRAL SPECIES	111	ENSGT00940000158652	ENSGT01030000234578.A.b.b.k	ENSGT00940000160024	ENSGT00940000157367.a.b.h	ENSGT00940000178227	ENSGT00510000048561	ENSGT00940000159653.g.b.b	ENSGT00940000153560.b.b.b.h	ENSGT00940000158756	ENSGT00940000154405.a.a	ENSGT01060000248591.a.a.a.b.b	ENSGT00940000161265	ENSGT00950000182979.a.a.a.b	ENSGT00940000163663.A.b	ENSGT00730000111100.a.a #21	ENSGT00940000153239.B #22	ENSGT00940000158365.f.a	ENSGT00940000155497.a.a.l
P. kingsleyae	MODERN SPECIES	141	ENSPKIG00000004471	ENSPKIG00000004421	ENSPKIG00000004396	ENSPKIG00000004365	ncf4 (ENSPKIG00000004332)	pvalb7 (ENSPKIG00000004294)	baiap2l2b (ENSPKIG00000004259)	pla2g6 (ENSPKIG00000004189)	CBX6 (ENSPKIG00000004143)	nptxrb (ENSPKIG00000004121)	dnal4b (ENSPKIG00000004101)	si:ch1073-357b18.4 (ENSPKIG00000004077)	mrtfab (ENSPKIG00000004053)	ENSPKIG00000004031	desi1a (ENSPKIG00000004018) #21	xrcc6 (ENSPKIG00000003974) #22	ENSPKIG00000003942	EP300 (ENSPKIG00000003816)	xpnpep3 (ENSPKIG00000003746)	st13 (ENSPKIG00000003681)	ENSPKIG00000003639	l3mbtl2 (ENSPKIG00000003503) #10	chadlb (ENSPKIG00000003436)	rangap1b (ENSPKIG00000003343) #13	ENSPKIG00000003296	ZC3H7B (ENSPKIG00000003219) #14	tefa (ENSPKIG00000003161) #15	TOB2 (ENSPKIG00000003127)	phf5a (ENSPKIG00000003100) #16	aco2 (ENSPKIG00000003055) #17	CSDC2 (ENSPKIG00000003033) #19
Asian bonytongue	MODERN SPECIES	12	ENSSFOG00015023744	ENSSFOG00015032503	ENSSFOG00015023734	ncf4 (ENSSFOG00015004718)	pvalb6 (ENSSFOG00015026993)	pla2g6 (ENSSFOG00015004646)	ENSSFOG00015028604	cbx6a (ENSSFOG00015032962)	nptxrb (ENSSFOG00015025949)	dnal4b (ENSSFOG00015004593)	mrtfab (ENSSFOG00015004553)	ENSSFOG00015004534	desi1a (ENSSFOG00015029550) #21	l3mbtl2 (ENSSFOG00015030235) #10	ENSSFOG00015014021	xrcc6 (ENSSFOG00015014409) #22	ENSSFOG00015030505	EP300 (ENSSFOG00015014129)	st13 (ENSSFOG00015014040)	ENSSFOG00015024363	l3mbtl2 (ENSSFOG00015029446) #10	chadlb (ENSSFOG00015013966)	rangap1b (ENSSFOG00015013842) #13	tefa (ENSSFOG00015023219) #15	phf5a (ENSSFOG00015013765) #16	aco2 (ENSSFOG00015013704) #17	CSDC2 (ENSSFOG00015011532) #19	PMM1 (ENSSFOG00015013657) #20	GUCY2C (ENSSFOG00015013494)	ENSSFOG00015026157	PLBD1 (ENSSFOG00015013345)
Spotted gar	MODERN SPECIES	650	TMEM150B (ENSLOCG00000011419)	ENSLOCG00000011428	ENSLOCG00000011435	PDGFB (ENSLOCG00000011442)	ncf4 (ENSLOCG00000011446)	ENSLOCG00000011456	baiap2l2b (ENSLOCG00000011463)	pla2g6 (ENSLOCG00000011469)	ENSLOCG00000017847	ENSLOCG00000011475	ENSLOCG00000011482	slc25a17 (ENSLOCG00000011492)	ENSLOCG00000011497	ENSLOCG00000011515	desi1a (ENSLOCG00000011526) #21	xrcc6 (ENSLOCG00000011533) #22	josd1 (ENSLOCG00000011543)	ENSLOCG00000011547	xpnpep3 (ENSLOCG00000011565)	ENSLOCG00000011574 #10	rangap1a (ENSLOCG00000011582) #13	zc3h7ba (ENSLOCG00000011588) #14	tefa (ENSLOCG00000011595) #15	TOB2 (ENSLOCG00000011604)	aco2 (ENSLOCG00000011607) #17	polr3h (ENSLOCG00000011621) #18	csdc2a (ENSLOCG00000011627) #19	ENSLOCG00000011637 #20	GUCY2C (ENSLOCG00000011647)	slc16a8 (ENSLOCG00000011658)	ENSLOCG00000011665
Reedfish	MODERN SPECIES	102															desi1a (ENSECRG00000021109) #21	xrcc6 (ENSECRG00000021079) #22	ENSECRG00000021069	ENSECRG00000021061	ENSECRG00000021056
Elephant shark	MODERN SPECIES	1746																xrcc6 (ENSCMIG00000004989) #22	ENSCMIG00000005134	MCHR1 (ENSCMIG00000005155)	ENSCMIG00000005159	ENSCMIG00000005161	ENSCMIG00000005165	desi1b (ENSCMIG00000005168) #21	ENSCMIG00000005174 #20	csdc2a (ENSCMIG00000005177) #19	polr3h (ENSCMIG00000005180) #18	ENSCMIG00000005181	ENSCMIG00000005184	aco2 (ENSCMIG00000005265) #17	phf5a (ENSCMIG00000005498) #16	TOB2 (ENSCMIG00000005503)	tefa (ENSCMIG00000005514) #15
Cyclostomata	ANCESTRAL SPECIES	606																ENSGT00940000153239.B #22	ENSGT00390000018295
Lamprey	MODERN SPECIES	5144																ENSPMAG00000005194 #22	ENSPMAG00000005185
Hagfish	MODERN SPECIES	1156										mrps7 (ENSEBUG00000004559)	ENSEBUG00000006079	ENSEBUG00000010551	ENSEBUG00000006012	ndufa6 (ENSEBUG00000013520)	ENSEBUG00000001732	ENSEBUG00000015214 #22	ENSEBUG00000005925	ndufa6 (ENSEBUG00000014927)	ENSEBUG00000003402	eif3s6ip (ENSEBUG00000003610)	ENSEBUG00000000879	ENSEBUG00000002788	ENSEBUG00000003720	ENSEBUG00000016626	ube2ia (ENSEBUG00000008590)	nprl3 (ENSEBUG00000004859)	ENSEBUG00000002182	ENSEBUG00000004599	ENSEBUG00000001869	ENSEBUG00000002256	ENSEBUG00000004359
Ciona	ANCESTRAL SPECIES																	ENSGT00940000153239.B #22
Ciona savignyi	MODERN SPECIES	172										ENSCSAVG00000001000	ENSCSAVG00000000998	ENSCSAVG00000000997	ENSCSAVG00000000995	ENSCSAVG00000000992	ENSCSAVG00000000989	ENSCSAVG00000000984 #22	ENSCSAVG00000000982	ENSCSAVG00000000980	ENSCSAVG00000000978	ENSCSAVG00000000977	ENSCSAVG00000000965	ENSCSAVG00000000961	ENSCSAVG00000000960	ENSCSAVG00000000959	ENSCSAVG00000000951	ENSCSAVG00000000949
Ciona intestinalis	MODERN SPECIES	4	ENSCING00000014652	ENSCING00000024705	ENSCING00000024171	ENSCING00000018226	ENSCING00000000291	ENSCING00000000670	ENSCING00000017411	ENSCING00000000676	ENSCING00000002514	ENSCING00000020067	ENSCING00000018803	ENSCING00000019269	ENSCING00000002481	ENSCING00000014634	ENSCING00000002428	ENSCING00000000633 #22	ENSCING00000023865	ENSCING00000014627	ENSCING00000019940	ENSCING00000002496	ENSCING00000023434	ENSCING00000010144	zf(zz)-1 (ENSCING00000002486)	ENSCING00000014618	ENSCING00000014617	ENSCING00000021967	ENSCING00000020316	ENSCING00000014616	ENSCING00000021352	ENSCING00000018345	ENSCING00000020498
Ecdysozoa	DUPLICATION
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153239.B.a #22
Caenorhabditis elegans	MODERN SPECIES	2	spat-2 (WBGene00012973)	rsa-2 (WBGene00012972)	W09D6.1 (WBGene00012356)	str-261 (WBGene00006287)	str-246 (WBGene00006273)	W09D6.4 (WBGene00012357)	W09D6.5 (WBGene00012358)	hmt-1 (WBGene00001815)	sup-35 (WBGene00012976)	Y48A6C.4 (WBGene00012977)	Y48A6C.8 (WBGene00219394)	pha-1 (WBGene00004010)	fbxa-128 (WBGene00012923)	Y47D3A.1 (WBGene00012922)	pola-1 (WBGene00012936)	cku-70 (WBGene00000519) #22	Y47D3A.31 (WBGene00012937)	tra-1 (WBGene00006604)	tbx-34 (WBGene00006553)	wht-8 (WBGene00012925)	Y47D3A.13 (WBGene00012926)	tbx-37 (WBGene00006556)	elo-8 (WBGene00001246)	Y47D3A.34 (WBGene00206461)	Y47D3A.14 (WBGene00012927)	aakb-2 (WBGene00012928)	rsks-1 (WBGene00012929)	Y47D3A.32 (WBGene00012938)	obr-1 (WBGene00012930)	Y47D3A.20 (WBGene00012931)	Y47D3A.21 (WBGene00012932)
Fruitfly	MODERN SPECIES	19	CG17187 (FBgn0037882)	Dph3 (FBgn0037883)	Arfip (FBgn0037884)	CG17721 (FBgn0037885)	CG31441 (FBgn0051441)	CG31388 (FBgn0051388)	scpr-B (FBgn0037888)	scpr-A (FBgn0037889)	CG17734 (FBgn0037890)	CG5214 (FBgn0037891)	pros (FBgn0004595)	KP78b (FBgn0026063)	KP78a (FBgn0026064)	mRpL40 (FBgn0037892)	mgr (FBgn0264694)	Irbp (FBgn0011774) #22	Ipo9 (FBgn0037894)	bumpel (FBgn0037895)	CG45676 (FBgn0267236)	ninaG (FBgn0037896)	CG5270 (FBgn0037897)	Dtd (FBgn0037898)	RpL24-like (FBgn0037899)	CG5276 (FBgn0037900)	Exd2 (FBgn0037901)	CG5281 (FBgn0037902)	sals (FBgn0051374)	CG17230 (FBgn0046225)	PGRP-LB (FBgn0037906)	dpr5 (FBgn0037908)	dpr4 (FBgn0053512)
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000153239.B.b #22
Fruitfly	MODERN SPECIES	16	CG13245 (FBgn0045827)	CG43816 (FBgn0264364)	CG31820 (FBgn0051820)	BicC (FBgn0000182)	CG45084 (FBgn0266459)	beat-Ia (FBgn0013433)	CG4891 (FBgn0028520)	CG4892 (FBgn0028884)	CG34168 (FBgn0085197)	Ca-alpha1D (FBgn0001991)	CG31819 (FBgn0028893)	Ca-Ma2d (FBgn0261999)	CG42818 (FBgn0262000)	PRL-1 (FBgn0024734)	CG46309 (FBgn0284225)	EndoGI (FBgn0028515) #22	twe (FBgn0002673)	CG4935 (FBgn0028897)	crp (FBgn0001994)	pkaap (FBgn0040079)	CG17329 (FBgn0028896)	CG13258 (FBgn0032582)	Cyp303a1 (FBgn0001992)	heix (FBgn0028375)	CG17328 (FBgn0028895)	GMF (FBgn0028894)	c(2)M (FBgn0028525)	CG5861 (FBgn0015338)	Syx5 (FBgn0011708)	cni (FBgn0000339)	fzy (FBgn0001086)