Gnathostomata	ANCESTRAL SPECIES	573														ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988 #26
Euteleostomi	ANCESTRAL SPECIES	579														ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26
Sarcopterygii	ANCESTRAL SPECIES	307							ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26
Tetrapoda	ANCESTRAL SPECIES	32	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00940000164423	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a #33	ENSGT00390000016794 #34	ENSGT00940000153309	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37
Amniota	ANCESTRAL SPECIES	6	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00390000016988.a.a.a.a.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000161535	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339	ENSGT00940000155862.a.a.a.a.a
Mammalia	ANCESTRAL SPECIES	59	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00390000016988.a.a.a.a.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Theria	ANCESTRAL SPECIES	5	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Eutheria	ANCESTRAL SPECIES	10	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Glires	ANCESTRAL SPECIES	14	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Rodentia	ANCESTRAL SPECIES	14	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Myomorpha	ANCESTRAL SPECIES	10	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Muroidea	ANCESTRAL SPECIES	20	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000168433	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Murinae	ANCESTRAL SPECIES	9	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT01050000247708 #18	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Rat	MODERN SPECIES	19	Cps1 (ENSRNOG00000013704) #7	Erbb4 (ENSRNOG00000014248) #8	RGD1562431 (ENSRNOG00000032306) #9	Ikzf2 (ENSRNOG00000027430) #10	LOC102550841 (ENSRNOG00000054475) #11	ENSRNOG00000069358 #12	Vwc2l (ENSRNOG00000027400) #13	Bard1 (ENSRNOG00000014960) #14	Abca12 (ENSRNOG00000015248) #15	Atic (ENSRNOG00000015511) #16	Fn1 (ENSRNOG00000014288) #17	AABR07068042.1 (ENSRNOG00000037894) #18	Mreg (ENSRNOG00000015774) #19	Pecr (ENSRNOG00000055295) #20	Tmem169 (ENSRNOG00000016091) #21	Xrcc5 (ENSRNOG00000016105) #22	Marchf4 (ENSRNOG00000016472) #23	ENSRNOG00000063848 #24	Smarcal1 (ENSRNOG00000016503) #25	ENSRNOG00000063418 #26	Igfbp2 (ENSRNOG00000016957) #27	Igfbp5 (ENSRNOG00000017206) #28	Tnp1 (ENSRNOG00000017611) #29	Tns1 (ENSRNOG00000014182) #30	Rufy4 (ENSRNOG00000032991) #31	Cxcr2 (ENSRNOG00000063618) #32	Cxcr1 (ENSRNOG00000048239) #33	Arpc2 (ENSRNOG00000014289) #34	Gpbar1 (ENSRNOG00000058260) #35	Aamp (ENSRNOG00000014399) #36	Pnkd (ENSRNOG00000014806) #37
Mus	ANCESTRAL SPECIES	5	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT01050000247708 #18	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00680000100065	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT01050000247708 #18	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00680000100065	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT01050000247708 #18	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00680000100065	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT01050000244890.a.b.a
Mouse	MODERN SPECIES		Acadl (ENSMUSG00000026003)	Myl1 (ENSMUSG00000061816)	Lancl1 (ENSMUSG00000026000)	Cps1 (ENSMUSG00000025991) #7	Erbb4 (ENSMUSG00000062209) #8	Ikzf2 (ENSMUSG00000025997) #10	Spag16 (ENSMUSG00000053153) #11	Vwc2l (ENSMUSG00000045648) #13	Bard1 (ENSMUSG00000026196) #14	Abca12 (ENSMUSG00000050296) #15	Atic (ENSMUSG00000026192) #16	Fn1 (ENSMUSG00000026193) #17	Mreg (ENSMUSG00000039395) #19	Pecr (ENSMUSG00000026189) #20	Tmem169 (ENSMUSG00000026188) #21	Xrcc5 (ENSMUSG00000026187) #22	Marchf4 (ENSMUSG00000039372) #23	Smarcal1 (ENSMUSG00000039354) #25	Ankar (ENSMUSG00000039342)	Rpl37a (ENSMUSG00000046330) ##26	Igfbp2 (ENSMUSG00000039323) #27	Igfbp5 (ENSMUSG00000026185) #28	Tnp1 (ENSMUSG00000026182) #29	Tns1 (ENSMUSG00000055322) #30	Rufy4 (ENSMUSG00000061815) #31	Cxcr2 (ENSMUSG00000026180) #32	Cxcr1 (ENSMUSG00000048480) #33	Arpc2 (ENSMUSG00000006304) #34	Gpbar1 (ENSMUSG00000064272) #35	Aamp (ENSMUSG00000006299) #36	Pnkd (ENSMUSG00000026179) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT01050000247708 #18	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37
Steppe mouse	MODERN SPECIES	3423											Atic (ENSMSIG00000022430) #16	Fn1 (ENSMSIG00000021272) #17	ENSMSIG00000021254 #18	Mreg (ENSMSIG00000021214) #19	Pecr (ENSMSIG00000021168) #20	ENSMSIG00000021121 #22	Marchf4 (ENSMSIG00000021049) #23	Smarcal1 (ENSMSIG00000021024) #25	Ankar (ENSMSIG00000020863)	ENSMSIG00000020836 ##26	Igfbp2 (ENSMSIG00000020825) #27	Igfbp5 (ENSMSIG00000020803) #28	ENSMSIG00000020791 #29	Tns1 (ENSMSIG00000020037) #30	Rufy4 (ENSMSIG00000020004) #31	Cxcr2 (ENSMSIG00000020001) #32	Cxcr1 (ENSMSIG00000019993) #33	Arpc2 (ENSMSIG00000019942) #34	Gpbar1 (ENSMSIG00000019937) #35	Aamp (ENSMSIG00000019900) #36	ENSMSIG00000019883
spretus	MODERN SPECIES		Acadl (MGP_SPRETEiJ_G0015035)	Myl1 (MGP_SPRETEiJ_G0015036)	Lancl1 (MGP_SPRETEiJ_G0015037)	Cps1 (MGP_SPRETEiJ_G0015038) #7	Erbb4 (MGP_SPRETEiJ_G0015039) #8	Ikzf2 (MGP_SPRETEiJ_G0015040) #10	Spag16 (MGP_SPRETEiJ_G0015041) #11	Vwc2l (MGP_SPRETEiJ_G0015042) #13	Bard1 (MGP_SPRETEiJ_G0015043) #14	Abca12 (MGP_SPRETEiJ_G0015044) #15	Atic (MGP_SPRETEiJ_G0015045) #16	Fn1 (MGP_SPRETEiJ_G0015046) #17	Mreg (MGP_SPRETEiJ_G0015047) #19	Pecr (MGP_SPRETEiJ_G0015048) #20	Tmem169 (MGP_SPRETEiJ_G0015049) #21	Xrcc5 (MGP_SPRETEiJ_G0015050) #22	Marchf4 (MGP_SPRETEiJ_G0015051) #23	Smarcal1 (MGP_SPRETEiJ_G0015052) #25	Rpl37a (MGP_SPRETEiJ_G0015053) ##26	Igfbp2 (MGP_SPRETEiJ_G0015054) #27	Igfbp5 (MGP_SPRETEiJ_G0015055) #28	Tnp1 (MGP_SPRETEiJ_G0015056) #29	Tns1 (MGP_SPRETEiJ_G0015057) #30	Rufy4 (MGP_SPRETEiJ_G0015058) #31	Cxcr2 (MGP_SPRETEiJ_G0015059) #32	MGP_SPRETEiJ_G0015060	Arpc2 (MGP_SPRETEiJ_G0015061) #34	Gpbar1 (MGP_SPRETEiJ_G0015062) #35	Aamp (MGP_SPRETEiJ_G0015063) #36	Pnkd (MGP_SPRETEiJ_G0015064) #37	Tmbim1 (MGP_SPRETEiJ_G0015065)
Ryukyu mouse	MODERN SPECIES		Acadl (MGP_CAROLIEiJ_G0014228)	Myl1 (MGP_CAROLIEiJ_G0014229)	Lancl1 (MGP_CAROLIEiJ_G0014230)	Cps1 (MGP_CAROLIEiJ_G0014231) #7	Erbb4 (MGP_CAROLIEiJ_G0014232) #8	Ikzf2 (MGP_CAROLIEiJ_G0014233) #10	Spag16 (MGP_CAROLIEiJ_G0014234) #11	Vwc2l (MGP_CAROLIEiJ_G0014235) #13	Bard1 (MGP_CAROLIEiJ_G0014236) #14	Abca12 (MGP_CAROLIEiJ_G0014237) #15	Atic (MGP_CAROLIEiJ_G0014238) #16	Fn1 (MGP_CAROLIEiJ_G0014239) #17	Mreg (MGP_CAROLIEiJ_G0014240) #19	Pecr (MGP_CAROLIEiJ_G0014241) #20	Tmem169 (MGP_CAROLIEiJ_G0014242) #21	Xrcc5 (MGP_CAROLIEiJ_G0014243) #22	Marchf4 (MGP_CAROLIEiJ_G0014244) #23	Smarcal1 (MGP_CAROLIEiJ_G0014245) #25	Ankar (MGP_CAROLIEiJ_G0014246)	Rpl37a (MGP_CAROLIEiJ_G0014247) ##26	Igfbp2 (MGP_CAROLIEiJ_G0014248) #27	Igfbp5 (MGP_CAROLIEiJ_G0014249) #28	Tnp1 (MGP_CAROLIEiJ_G0014250) #29	Tns1 (MGP_CAROLIEiJ_G0014251) #30	Rufy4 (MGP_CAROLIEiJ_G0014252) #31	Cxcr2 (MGP_CAROLIEiJ_G0014253) #32	Cxcr1 (MGP_CAROLIEiJ_G0014254) #33	Arpc2 (MGP_CAROLIEiJ_G0014255) #34	Gpbar1 (MGP_CAROLIEiJ_G0014256) #35	Aamp (MGP_CAROLIEiJ_G0014257) #36	Pnkd (MGP_CAROLIEiJ_G0014258) #37
Shrew mouse	MODERN SPECIES	18	Acadl (MGP_PahariEiJ_G0027466)	Myl1 (MGP_PahariEiJ_G0027467)	Lancl1 (MGP_PahariEiJ_G0027468)	Cps1 (MGP_PahariEiJ_G0027469) #7	Erbb4 (MGP_PahariEiJ_G0027470) #8	Ikzf2 (MGP_PahariEiJ_G0027471) #10	Spag16 (MGP_PahariEiJ_G0027472) #11	Vwc2l (MGP_PahariEiJ_G0027473) #13	Bard1 (MGP_PahariEiJ_G0027474) #14	Abca12 (MGP_PahariEiJ_G0027475) #15	Atic (MGP_PahariEiJ_G0027476) #16	Fn1 (MGP_PahariEiJ_G0027477) #17	Mreg (MGP_PahariEiJ_G0027478) #19	Pecr (MGP_PahariEiJ_G0027479) #20	Tmem169 (MGP_PahariEiJ_G0027480) #21	Xrcc5 (MGP_PahariEiJ_G0027481) #22	Marchf4 (MGP_PahariEiJ_G0027482) #23	Smarcal1 (MGP_PahariEiJ_G0027483) #25	Ankar (MGP_PahariEiJ_G0027484)	Rpl37a (MGP_PahariEiJ_G0027485) ##26	Igfbp2 (MGP_PahariEiJ_G0027486) #27	Igfbp5 (MGP_PahariEiJ_G0027487) #28	Tnp1 (MGP_PahariEiJ_G0027488) #29	Tns1 (MGP_PahariEiJ_G0027489) #30	Rufy4 (MGP_PahariEiJ_G0027490) #31	Cxcr2 (MGP_PahariEiJ_G0027491) #32	Cxcr1 (MGP_PahariEiJ_G0027492) #33	Arpc2 (MGP_PahariEiJ_G0027493) #34	Gpbar1 (MGP_PahariEiJ_G0027494) #35	Aamp (MGP_PahariEiJ_G0027495) #36	Pnkd (MGP_PahariEiJ_G0027496) #37
Cricetidae	ANCESTRAL SPECIES	19	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.a
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.a
Chinese hamster chok1gshd	MODERN SPECIES	1	Acadl (ENSCGRG00001020753)	Myl1 (ENSCGRG00001018385)	Lancl1 (ENSCGRG00001018654)	Cps1 (ENSCGRG00001019583) #7	Erbb4 (ENSCGRG00001023006) #8	Ikzf2 (ENSCGRG00001020531) #10	ENSCGRG00001018870 #11	Vwc2l (ENSCGRG00001022705) #13	Bard1 (ENSCGRG00001019211) #14	Abca12 (ENSCGRG00001018994) #15	Atic (ENSCGRG00001019907) #16	Fn1 (ENSCGRG00001023892) #17	Mreg (ENSCGRG00001019227) #19	Pecr (ENSCGRG00001020645) #20	Tmem169 (ENSCGRG00001022364) #21	Xrcc5 (ENSCGRG00001022536) #22	Marchf4 (ENSCGRG00001020474) #23	Smarcal1 (ENSCGRG00001024685) #25	Rpl37a (ENSCGRG00001018703) ##26	Igfbp2 (ENSCGRG00001020105) #27	Igfbp5 (ENSCGRG00001021151) #28	Tnp1 (ENSCGRG00001024576) #29	Tns1 (ENSCGRG00001019432) #30	Rufy4 (ENSCGRG00001019715) #31	Cxcr2 (ENSCGRG00001009605) #32	Cxcr1 (ENSCGRG00001019693) #33	Arpc2 (ENSCGRG00001020392) #34	Aamp (ENSCGRG00001019925) #36	Gpbar1 (ENSCGRG00001009681) #35	Pnkd (ENSCGRG00001024071) #37	Tmbim1 (ENSCGRG00001020249)
Golden Hamster	MODERN SPECIES	640	Acadl (ENSMAUG00000018703)	Myl1 (ENSMAUG00000018186)	Lancl1 (ENSMAUG00000013753)	Cps1 (ENSMAUG00000010923) #7	Erbb4 (ENSMAUG00000021336) #8	Ikzf2 (ENSMAUG00000017775) #10	ENSMAUG00000010536 #11	Vwc2l (ENSMAUG00000009036) #13	ENSMAUG00000009590	Bard1 (ENSMAUG00000005663) #14	Abca12 (ENSMAUG00000011442) #15	Atic (ENSMAUG00000013188) #16	Fn1 (ENSMAUG00000001872) #17	Pecr (ENSMAUG00000009535) #20	Tmem169 (ENSMAUG00000014332) #21	Xrcc5 (ENSMAUG00000006680) #22	Marchf4 (ENSMAUG00000014893) #23	Smarcal1 (ENSMAUG00000021316) #25	Rpl37a (ENSMAUG00000020042) ##26	Igfbp2 (ENSMAUG00000016997) #27	Igfbp5 (ENSMAUG00000001698) #28	Tnp1 (ENSMAUG00000021536) #29	Tns1 (ENSMAUG00000019800) #30	ENSMAUG00000006666	Rufy4 (ENSMAUG00000011433) #31	Cxcr2 (ENSMAUG00000003254) #32	Arpc2 (ENSMAUG00000001445) #34	ENSMAUG00000022137	Pnkd (ENSMAUG00000013099) #37	ENSMAUG00000008213	Slc11a1 (ENSMAUG00000011528)
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT01050000244890.a.b.a.a	ENSGT00940000158887 #37
Northern American deer mouse	MODERN SPECIES	4	Myl1 (ENSPEMG00000016490)	Lancl1 (ENSPEMG00000020372)	Cps1 (ENSPEMG00000010458) #7	Erbb4 (ENSPEMG00000017090) #8	ENSPEMG00000024657 #9	Ikzf2 (ENSPEMG00000011886) #10	ENSPEMG00000018844 #11	Vwc2l (ENSPEMG00000018139) #13	Bard1 (ENSPEMG00000009105) #14	Abca12 (ENSPEMG00000016577) #15	Atic (ENSPEMG00000014807) #16	Fn1 (ENSPEMG00000018184) #17	Mreg (ENSPEMG00000007185) #19	Pecr (ENSPEMG00000007409) #20	Tmem169 (ENSPEMG00000026340) #21	Xrcc5 (ENSPEMG00000012102) #22	Marchf4 (ENSPEMG00000005987) #23	Smarcal1 (ENSPEMG00000013063) #25	Rpl37a (ENSPEMG00000008580) ##26	Igfbp2 (ENSPEMG00000018165) #27	Igfbp5 (ENSPEMG00000024920) #28	Tnp1 (ENSPEMG00000013633) #29	Tns1 (ENSPEMG00000017420) #30	Rufy4 (ENSPEMG00000022881) #31	Cxcr2 (ENSPEMG00000029924) #32	ENSPEMG00000014345	ENSPEMG00000024826	Cxcr1 (ENSPEMG00000014090) #33	Arpc2 (ENSPEMG00000013064) #34	Gpbar1 (ENSPEMG00000007092) #35	Aamp (ENSPEMG00000013785) #36
Prairie vole	MODERN SPECIES	354	Per2 (ENSMOCG00000004188)	ENSMOCG00000021836	Traf3ip1 (ENSMOCG00000019123)	Asb1 (ENSMOCG00000017919)	Twist2 (ENSMOCG00000015210)	Hdac4 (ENSMOCG00000005287)	Ndufa10 (ENSMOCG00000006296)	Or6b2 (ENSMOCG00000006336)	ENSMOCG00000006503	ENSMOCG00000006611	ENSMOCG00000002737	ENSMOCG00000015039	Mreg (ENSMOCG00000014450) #19	Pecr (ENSMOCG00000020504) #20	Tmem169 (ENSMOCG00000017317) #21	Xrcc5 (ENSMOCG00000021444) #22	Marchf4 (ENSMOCG00000000410) #23	Smarcal1 (ENSMOCG00000014891) #25	Rpl37a (ENSMOCG00000006603) ##26	ENSMOCG00000005280 #27	Igfbp5 (ENSMOCG00000003217) #28	Tnp1 (ENSMOCG00000017865) #29	Tns1 (ENSMOCG00000017753) #30	Rufy4 (ENSMOCG00000018952) #31	Cxcr2 (ENSMOCG00000005561) #32	Cxcr1 (ENSMOCG00000006635) #33	Arpc2 (ENSMOCG00000004660) #34	Gpbar1 (ENSMOCG00000006359) #35	Aamp (ENSMOCG00000014930) #36	Tmbim1 (ENSMOCG00000014595)	Pnkd (ENSMOCG00000007956) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1887						Vwc2l (ENSNGAG00000010373) #13	Bard1 (ENSNGAG00000023844) #14	ENSNGAG00000013362	Abca12 (ENSNGAG00000022702) #15	Atic (ENSNGAG00000018746) #16	ENSNGAG00000024366	ENSNGAG00000011565 #17	Mreg (ENSNGAG00000002348) #19	Pecr (ENSNGAG00000003949) #20	Tmem169 (ENSNGAG00000022271) #21	Xrcc5 (ENSNGAG00000023190) #22	Marchf4 (ENSNGAG00000007981) #23	Smarcal1 (ENSNGAG00000016128) #25	Rpl37a (ENSNGAG00000012401) ##26	Igfbp2 (ENSNGAG00000014418) #27	Igfbp5 (ENSNGAG00000015689) #28	ENSNGAG00000020111	ENSNGAG00000017373	Tns1 (ENSNGAG00000023512) #30	Rufy4 (ENSNGAG00000009822) #31	Arpc2 (ENSNGAG00000018188) #34	Gpbar1 (ENSNGAG00000020381) #35	Aamp (ENSNGAG00000022771) #36	Pnkd (ENSNGAG00000014980) #37	ENSNGAG00000013421	Catip (ENSNGAG00000022604)
Kangaroo rat	MODERN SPECIES	320	Cps1 (ENSDORG00000007835) #7	Erbb4 (ENSDORG00000013025) #8	ENSDORG00000023387	ENSDORG00000028919	Ikzf2 (ENSDORG00000007539) #10	ENSDORG00000025882 #11	Vwc2l (ENSDORG00000010438) #13	ENSDORG00000015439 #14	Abca12 (ENSDORG00000005459) #15	Atic (ENSDORG00000010127) #16	ENSDORG00000028093	ENSDORG00000023313 #17	Mreg (ENSDORG00000008365) #19	Pecr (ENSDORG00000015456) #20	Tmem169 (ENSDORG00000011415) #21	Xrcc5 (ENSDORG00000011417) #22	Marchf4 (ENSDORG00000002802) #23	Smarcal1 (ENSDORG00000013944) #25	Rpl37a (ENSDORG00000027793) ##26	Igfbp2 (ENSDORG00000008698) #27	Igfbp5 (ENSDORG00000008699) #28	ENSDORG00000000281	Tns1 (ENSDORG00000013017) #30	Rufy4 (ENSDORG00000007142) #31	Cxcr2 (ENSDORG00000029478) #32	Cxcr1 (ENSDORG00000015675) #33	ENSDORG00000026172	ENSDORG00000016107 #34	Gpbar1 (ENSDORG00000023497) #35	Aamp (ENSDORG00000016108) #36	Pnkd (ENSDORG00000016109) #37
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a.e #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Marmotini_b	ANCESTRAL SPECIES	167	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29
Squirrel	MODERN SPECIES	186	MYL1 (ENSSTOG00000003469)	LANCL1 (ENSSTOG00000022397)	CPS1 (ENSSTOG00000000128) #7	ERBB4 (ENSSTOG00000000187) #8	IKZF2 (ENSSTOG00000011683) #10	ENSSTOG00000011925 #11	ENSSTOG00000029346	VWC2L (ENSSTOG00000011936) #13	BARD1 (ENSSTOG00000002413) #14	ABCA12 (ENSSTOG00000022176) #15	ATIC (ENSSTOG00000002687) #16	FN1 (ENSSTOG00000002709) #17	MREG (ENSSTOG00000009936) #19	PECR (ENSSTOG00000013870) #20	TMEM169 (ENSSTOG00000006471) #21	XRCC5 (ENSSTOG00000006478) #22	MARCHF4 (ENSSTOG00000033181) #23	SMARCAL1 (ENSSTOG00000015621) #25	RPL37A (ENSSTOG00000030968) ##26	IGFBP2 (ENSSTOG00000011217) #27	IGFBP5 (ENSSTOG00000029182) #28	TNP1 (ENSSTOG00000024911) #29
Arctic ground squirrel	MODERN SPECIES	265						ENSUPAG00010004229 #11	VWC2L (ENSUPAG00010004248) #13	BARD1 (ENSUPAG00010004260) #14	ENSUPAG00010004290	ABCA12 (ENSUPAG00010004294) #15	ATIC (ENSUPAG00010004349) #16	FN1 (ENSUPAG00010004397) #17	MREG (ENSUPAG00010005248) #19	PECR (ENSUPAG00010005257) #20	TMEM169 (ENSUPAG00010005270) #21	XRCC5 (ENSUPAG00010005275) #22	MARCHF4 (ENSUPAG00010005287) #23	ENSUPAG00010005289	SMARCAL1 (ENSUPAG00010005292) #25	RPL37A (ENSUPAG00010005317) ##26
Alpin marmot	MODERN SPECIES	8	LANCL1 (ENSMMMG00000016069)	CPS1 (ENSMMMG00000016097) #7	ENSMMMG00000016133 #8	ENSMMMG00000016149	ENSMMMG00000016161 #9	IKZF2 (ENSMMMG00000016182) #10	ENSMMMG00000016401 #11	VWC2L (ENSMMMG00000016430) #13	BARD1 (ENSMMMG00000016460) #14	ABCA12 (ENSMMMG00000016481) #15	ATIC (ENSMMMG00000016514) #16	FN1 (ENSMMMG00000016529) #17	MREG (ENSMMMG00000017833) #19	PECR (ENSMMMG00000017844) #20	TMEM169 (ENSMMMG00000017863) #21	XRCC5 (ENSMMMG00000017867) #22	MARCHF4 (ENSMMMG00000017890) #23	SMARCAL1 (ENSMMMG00000017898) #25	RPL37A (ENSMMMG00000017968) ##26	ENSMMMG00000017973	IGFBP2 (ENSMMMG00000018011) #27	IGFBP5 (ENSMMMG00000018026) #28	TNP1 (ENSMMMG00000018045) #29	TNS1 (ENSMMMG00000018087) #30	RUFY4 (ENSMMMG00000018143) #31	CXCR2 (ENSMMMG00000018174) #32	CXCR1 (ENSMMMG00000018180) #33	ARPC2 (ENSMMMG00000018188) #34	GPBAR1 (ENSMMMG00000018212) #35	ENSMMMG00000018213 #36	ENSMMMG00000018234
Eurasian red squirrel	MODERN SPECIES	12	CPS1 (ENSSVLG00005005630) #7	ERBB4 (ENSSVLG00005006250) #8	ENSSVLG00005006704	ENSSVLG00005006732 #9	IKZF2 (ENSSVLG00005006796) #10	ENSSVLG00005006962	SPAG16 (ENSSVLG00005007010) #11	VWC2L (ENSSVLG00005007108) #13	BARD1 (ENSSVLG00005007225) #14	ABCA12 (ENSSVLG00005007547) #15	ATIC (ENSSVLG00005008052) #16	FN1 (ENSSVLG00005008290) #17	MREG (ENSSVLG00005008491) #19	PECR (ENSSVLG00005008529) #20	TMEM169 (ENSSVLG00005008550) #21	XRCC5 (ENSSVLG00005008576) #22	MARCHF4 (ENSSVLG00005008624) #23	ENSSVLG00005008994 #26	IGFBP2 (ENSSVLG00005009134) #27	IGFBP5 (ENSSVLG00005009167) #28	TNP1 (ENSSVLG00005009189) #29	TNS1 (ENSSVLG00005009290) #30	RUFY4 (ENSSVLG00005009621) #31	CXCR2 (ENSSVLG00005010719) #32	CXCR1 (ENSSVLG00005010741) #33	ENSSVLG00005010772	ARPC2 (ENSSVLG00005010826) #34	GPBAR1 (ENSSVLG00005010913) #35	AAMP (ENSSVLG00005010932) #36	PNKD (ENSSVLG00005011172) #37	TMBIM1 (ENSSVLG00005011285)
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b.eb.a #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Hystricomorpha_a	ANCESTRAL SPECIES	32														ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b.eb.a #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	28														ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b.eb.a #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Long-tailed chinchilla	MODERN SPECIES	160														PECR (ENSCLAG00000013472) #20	TMEM169 (ENSCLAG00000012542) #21	XRCC5 (ENSCLAG00000011846) #22	MARCHF4 (ENSCLAG00000009222) #23	SMARCAL1 (ENSCLAG00000011513) #25	RPL37A (ENSCLAG00000015640) ##26	IGFBP2 (ENSCLAG00000017353) #27	IGFBP5 (ENSCLAG00000017354) #28	TNP1 (ENSCLAG00000009510) #29	TNS1 (ENSCLAG00000015284) #30	RUFY4 (ENSCLAG00000009144) #31	CXCR2 (ENSCLAG00000017805) #32	CXCR1 (ENSCLAG00000018091) #33	ARPC2 (ENSCLAG00000008305) #34	GPBAR1 (ENSCLAG00000008408) #35	AAMP (ENSCLAG00000009759) #36	TMBIM1 (ENSCLAG00000016172)	PNKD (ENSCLAG00000012048) #37
Degu	MODERN SPECIES	176													PECR (ENSODEG00000012400) #20	TMEM169 (ENSODEG00000011953) #21	ENSODEG00000019908	XRCC5 (ENSODEG00000012872) #22	MARCHF4 (ENSODEG00000014790) #23	SMARCAL1 (ENSODEG00000012339) #25	ENSODEG00000012648 #26	ENSODEG00000011005 #27	IGFBP5 (ENSODEG00000012717) #28	TNP1 (ENSODEG00000011561) #29	ENSODEG00000012277	ENSODEG00000011389	TNS1 (ENSODEG00000011217) #30	RUFY4 (ENSODEG00000010955) #31	ENSODEG00000020035	ENSODEG00000016103 #34	GPBAR1 (ENSODEG00000020087) #35	AAMP (ENSODEG00000011651) #36	ENSODEG00000011159
Guinea pig	MODERN SPECIES	153														PECR (ENSCPOG00000011717) #20	TMEM169 (ENSCPOG00000035972) #21	XRCC5 (ENSCPOG00000012213) #22	MARCHF4 (ENSCPOG00000030980) #23	SMARCAL1 (ENSCPOG00000012231) #25	RPL37A (ENSCPOG00000036967) ##26	IGFBP2 (ENSCPOG00000019954) #27	IGFBP5 (ENSCPOG00000034237) #28	TNP1 (ENSCPOG00000015208) #29	TNS1 (ENSCPOG00000001411) #30	Cxcr2 (ENSCPOG00000001412) #32	Cxcr1 (ENSCPOG00000021600) #33	ARPC2 (ENSCPOG00000002124) #34	GPBAR1 (ENSCPOG00000002126) #35	AAMP (ENSCPOG00000002128) #36	TMBIM1 (ENSCPOG00000001247)	PNKD (ENSCPOG00000020589) #37	CATIP (ENSCPOG00000012485)
Naked mole-rat female	MODERN SPECIES	17	VWC2L (ENSHGLG00000006216) #13	BARD1 (ENSHGLG00000048952) #14	ENSHGLG00000049209	ABCA12 (ENSHGLG00000004765) #15	ENSHGLG00000004335	ENSHGLG00000004264	ATIC (ENSHGLG00000004192) #16	FN1 (ENSHGLG00000004089) #17	MREG (ENSHGLG00000040698) #19	ENSHGLG00000045074	ENSHGLG00000041086	ENSHGLG00000032001	ENSHGLG00000038070	TMEM169 (ENSHGLG00000043207) #21	ENSHGLG00000016206 #20	XRCC5 (ENSHGLG00000015924) #22	MARCHF4 (ENSHGLG00000016985) #23	ENSHGLG00000045115	SMARCAL1 (ENSHGLG00000019107) #25	ENSHGLG00000042129 #26	IGFBP2 (ENSHGLG00000011284) #27	IGFBP5 (ENSHGLG00000034439) #28	ENSHGLG00000010535	ENSHGLG00000033025	ENSHGLG00000018046	ENSHGLG00000015000	ENSHGLG00000017607	ENSHGLG00000043952	TNS1 (ENSHGLG00000012009) #30	ENSHGLG00000008227	RUFY4 (ENSHGLG00000017563) #31
Lagomorpha	ANCESTRAL SPECIES	13	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Rabbit	MODERN SPECIES	18	IKZF2 (ENSOCUG00000007309) #10	ENSOCUG00000037270	SPAG16 (ENSOCUG00000014285) #11	ENSOCUG00000032906	VWC2L (ENSOCUG00000014302) #13	BARD1 (ENSOCUG00000001552) #14	ABCA12 (ENSOCUG00000017926) #15	ATIC (ENSOCUG00000001121) #16	FN1 (ENSOCUG00000010104) #17	ENSOCUG00000031511	ENSOCUG00000037486	ENSOCUG00000031308	MREG (ENSOCUG00000006632) #19	PECR (ENSOCUG00000006636) #20	TMEM169 (ENSOCUG00000004684) #21	XRCC5 (ENSOCUG00000006642) #22	MARCHF4 (ENSOCUG00000025107) #23	SMARCAL1 (ENSOCUG00000009891) #25	ENSOCUG00000039089	ENSOCUG00000035553 ##26	ENSOCUG00000008561 #27	IGFBP5 (ENSOCUG00000025513) #28	ENSOCUG00000034704	ENSOCUG00000032187	TNP1 (ENSOCUG00000021367) #29	ENSOCUG00000017762	ENSOCUG00000038537	TNS1 (ENSOCUG00000001963) #30	RUFY4 (ENSOCUG00000022248) #31	CXCR2 (ENSOCUG00000025638) #32	CXCR1 (ENSOCUG00000015108) #33
Pika	MODERN SPECIES	2761															ENSOPRG00000013612 #21	ENSOPRG00000013620 #22
Tree shrew	MODERN SPECIES	617															ENSTBEG00000003564 #20	XRCC5 (ENSTBEG00000003977) #22	MARCHF4 (ENSTBEG00000006045) #23	SMARCAL1 (ENSTBEG00000006232) #25	RPL37A (ENSTBEG00000007409) ##26	IGFBP2 (ENSTBEG00000007733) #27	IGFBP5 (ENSTBEG00000008479) #28
Primates	ANCESTRAL SPECIES	13	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00530000063186.b.b	ENSGT00910000147691	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00530000063186.b.b	ENSGT00910000147691	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.a.a.a.a.b.d ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34
Hominoidea	ANCESTRAL SPECIES	15	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00390000016988.b #26	ENSGT00550000074820.h.bb.b.b	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33
Hominidae	ANCESTRAL SPECIES	17	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00910000148020	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276.i #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00910000148020	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276.i #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35
Pan	ANCESTRAL SPECIES	12	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00910000148020	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276.i #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00550000074820.h.cb	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36
Chimpanzee	MODERN SPECIES	15	MYL1 (ENSPTRG00000012879)	LANCL1 (ENSPTRG00000012880)	CPS1 (ENSPTRG00000012881) #7	ERBB4 (ENSPTRG00000012883) #8	ENSPTRG00000050921	IKZF2 (ENSPTRG00000048797) #10	SPAG16 (ENSPTRG00000012885) #11	VWC2L (ENSPTRG00000012886) #13	BARD1 (ENSPTRG00000012888) #14	ABCA12 (ENSPTRG00000012889) #15	ATIC (ENSPTRG00000012891) #16	FN1 (ENSPTRG00000012892) #17	MREG (ENSPTRG00000012893) #19	PECR (ENSPTRG00000012894) #20	TMEM169 (ENSPTRG00000012895) #21	XRCC5 (ENSPTRG00000012896) #22	MARCHF4 (ENSPTRG00000012897) #23	SMARCAL1 (ENSPTRG00000012898) #25	ENSPTRG00000050901 #26	ENSPTRG00000012900	IGFBP2 (ENSPTRG00000012901) #27	IGFBP5 (ENSPTRG00000012903) #28	TNP1 (ENSPTRG00000012904) #29	ENSPTRG00000041548	TNS1 (ENSPTRG00000012906) #30	RUFY4 (ENSPTRG00000012908) #31	CXCR2 (ENSPTRG00000050817) #32	CXCR1 (ENSPTRG00000012909) #33	ARPC2 (ENSPTRG00000012911) #34	GPBAR1 (ENSPTRG00000038735) #35	AAMP (ENSPTRG00000012913) #36
Bonobo	MODERN SPECIES	15	MYL1 (ENSPPAG00000032667)	LANCL1 (ENSPPAG00000039753)	CPS1 (ENSPPAG00000037514) #7	ERBB4 (ENSPPAG00000041527) #8	ENSPPAG00000023325	IKZF2 (ENSPPAG00000041873) #10	SPAG16 (ENSPPAG00000043643) #11	VWC2L (ENSPPAG00000037418) #13	BARD1 (ENSPPAG00000043112) #14	ABCA12 (ENSPPAG00000027092) #15	ATIC (ENSPPAG00000031346) #16	FN1 (ENSPPAG00000041188) #17	MREG (ENSPPAG00000024976) #19	PECR (ENSPPAG00000040758) #20	TMEM169 (ENSPPAG00000043337) #21	XRCC5 (ENSPPAG00000032493) #22	MARCHF4 (ENSPPAG00000035784) #23	SMARCAL1 (ENSPPAG00000042500) #25	ENSPPAG00000027287 #26	ENSPPAG00000026236	ENSPPAG00000025854 #27	IGFBP5 (ENSPPAG00000026552) #28	TNP1 (ENSPPAG00000026261) #29	TNS1 (ENSPPAG00000040585) #30	RUFY4 (ENSPPAG00000028954) #31	CXCR2 (ENSPPAG00000017264) #32	CXCR1 (ENSPPAG00000020733) #33	ARPC2 (ENSPPAG00000036270) #34	GPBAR1 (ENSPPAG00000009032) #35	AAMP (ENSPPAG00000028643) #36	PNKD (ENSPPAG00000034969) #37
Human	MODERN SPECIES	11	ACADL (ENSG00000115361)	MYL1 (ENSG00000168530)	LANCL1 (ENSG00000115365)	CPS1 (ENSG00000021826) #7	ERBB4 (ENSG00000178568) #8	IKZF2 (ENSG00000030419) #10	SPAG16 (ENSG00000144451) #11	VWC2L (ENSG00000174453) #13	BARD1 (ENSG00000138376) #14	ABCA12 (ENSG00000144452) #15	ATIC (ENSG00000138363) #16	FN1 (ENSG00000115414) #17	MREG (ENSG00000118242) #19	PECR (ENSG00000115425) #20	TMEM169 (ENSG00000163449) #21	XRCC5 (ENSG00000079246) #22	MARCHF4 (ENSG00000144583) #23	SMARCAL1 (ENSG00000138375) #25	RPL37A (ENSG00000197756) ##26	IGFBP2 (ENSG00000115457) #27	IGFBP5 (ENSG00000115461) #28	TNP1 (ENSG00000118245) #29	TNS1 (ENSG00000079308) #30	RUFY4 (ENSG00000188282) #31	CXCR2 (ENSG00000180871) #32	CXCR1 (ENSG00000163464) #33	ARPC2 (ENSG00000163466) #34	GPBAR1 (ENSG00000179921) #35	AAMP (ENSG00000127837) #36	PNKD (ENSG00000127838) #37	TMBIM1 (ENSG00000135926)
Gorilla	MODERN SPECIES	15	LANCL1 (ENSGGOG00000041237)	CPS1 (ENSGGOG00000028226) #7	ERBB4 (ENSGGOG00000014309) #8	ENSGGOG00000039432	IKZF2 (ENSGGOG00000011301) #10	SPAG16 (ENSGGOG00000043689) #11	VWC2L (ENSGGOG00000016106) #13	BARD1 (ENSGGOG00000014597) #14	ABCA12 (ENSGGOG00000011952) #15	ATIC (ENSGGOG00000007916) #16	FN1 (ENSGGOG00000015010) #17	MREG (ENSGGOG00000027103) #19	PECR (ENSGGOG00000015630) #20	ENSGGOG00000041701 #21	TMEM169 (ENSGGOG00000011466) #21	XRCC5 (ENSGGOG00000011471) #22	MARCHF4 (ENSGGOG00000000174) #23	SMARCAL1 (ENSGGOG00000014815) #25	RPL37A (ENSGGOG00000014827) #26	ENSGGOG00000026130	IGFBP2 (ENSGGOG00000011721) #27	IGFBP5 (ENSGGOG00000016946) #28	ENSGGOG00000022571	TNS1 (ENSGGOG00000003645) #30	ENSGGOG00000036133 #32	RUFY4 (ENSGGOG00000000003) #31	ENSGGOG00000009100 #32	CXCR1 (ENSGGOG00000039965) #33	ARPC2 (ENSGGOG00000008425) #34	GPBAR1 (ENSGGOG00000026208) #35	AAMP (ENSGGOG00000006883) #36
Orangutan	MODERN SPECIES	15	LANCL1 (ENSPPYG00000033825)	CPS1 (ENSPPYG00000013137) #7	ERBB4 (ENSPPYG00000013138) #8	ENSPPYG00000035873 #9	IKZF2 (ENSPPYG00000013139) #10	SPAG16 (ENSPPYG00000013141) #11	ENSPPYG00000034405	VWC2L (ENSPPYG00000013143) #13	BARD1 (ENSPPYG00000013144) #14	ABCA12 (ENSPPYG00000013145) #15	ATIC (ENSPPYG00000013146) #16	FN1 (ENSPPYG00000013148) #17	MREG (ENSPPYG00000013149) #19	PECR (ENSPPYG00000013150) #20	TMEM169 (ENSPPYG00000037480) #21	XRCC5 (ENSPPYG00000013152) #22	MARCHF4 (ENSPPYG00000013154) #23	SMARCAL1 (ENSPPYG00000013155) #25	RPL37A (ENSPPYG00000025878) ##26	ENSPPYG00000035590	IGFBP2 (ENSPPYG00000013156) #27	ENSPPYG00000032583 #28	TNP1 (ENSPPYG00000013158) #29	ENSPPYG00000033641	TNS1 (ENSPPYG00000013159) #30	RUFY4 (ENSPPYG00000013161) #31	CXCR2 (ENSPPYG00000013162) #32	CXCR1 (ENSPPYG00000013163) #33	ARPC2 (ENSPPYG00000013164) #34	GPBAR1 (ENSPPYG00000013165) #35	AAMP (ENSPPYG00000013166) #36
Gibbon	MODERN SPECIES	14	ENSNLEG00000007179	MYL1 (ENSNLEG00000007180)	LANCL1 (ENSNLEG00000007182)	CPS1 (ENSNLEG00000007187) #7	ERBB4 (ENSNLEG00000007195) #8	IKZF2 (ENSNLEG00000031188) #10	SPAG16 (ENSNLEG00000007201) #11	VWC2L (ENSNLEG00000007204) #13	BARD1 (ENSNLEG00000007205) #14	ABCA12 (ENSNLEG00000007208) #15	ATIC (ENSNLEG00000007215) #16	FN1 (ENSNLEG00000007224) #17	MREG (ENSNLEG00000007262) #19	PECR (ENSNLEG00000007265) #20	TMEM169 (ENSNLEG00000034416) #21	XRCC5 (ENSNLEG00000007267) #22	ENSNLEG00000033854	MARCHF4 (ENSNLEG00000007271) #23	SMARCAL1 (ENSNLEG00000007272) #25	ENSNLEG00000007276 #26	ENSNLEG00000028695	IGFBP2 (ENSNLEG00000007277) #27	IGFBP5 (ENSNLEG00000007279) #28	TNP1 (ENSNLEG00000007281) #29	ENSNLEG00000035519	ENSNLEG00000030847	TNS1 (ENSNLEG00000007284) #30	ENSNLEG00000007290 #33	ENSNLEG00000007291 #31	ENSNLEG00000033617	ARPC2 (ENSNLEG00000033566) #34
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00530000063186.b.b	ENSGT00910000147691	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00550000074820.h.cb	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32
Rhinopithecus	ANCESTRAL SPECIES	313								ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.k #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00550000074820.h.cb	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00910000147575	ENSGT00560000078504
Golden snub-nosed monkey	MODERN SPECIES	1020													MREG (ENSRROG00000035595) #19	PECR (ENSRROG00000041517) #20	TMEM169 (ENSRROG00000042403) #21	XRCC5 (ENSRROG00000032044) #22	ENSRROG00000028632	MARCHF4 (ENSRROG00000041939) #23	SMARCAL1 (ENSRROG00000036366) #25	ENSRROG00000000713 #26	ENSRROG00000033914	IGFBP2 (ENSRROG00000001861) #27	IGFBP5 (ENSRROG00000034083) #28	ENSRROG00000029708	ENSRROG00000028744
Black snub-nosed monkey	MODERN SPECIES	1231														PECR (ENSRBIG00000035430) #20	TMEM169 (ENSRBIG00000040511) #21	XRCC5 (ENSRBIG00000032954) #22	ENSRBIG00000024074	MARCHF4 (ENSRBIG00000042428) #23	SMARCAL1 (ENSRBIG00000040145) #25	ENSRBIG00000031364 #26	ENSRBIG00000039174	IGFBP2 (ENSRBIG00000019332) #27	IGFBP5 (ENSRBIG00000029560) #28	ENSRBIG00000021185	ENSRBIG00000029065	PLK4 (ENSRBIG00000025195)	MFSD8 (ENSRBIG00000027569)	ABHD18 (ENSRBIG00000044564)
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35
Macaca_a	ANCESTRAL SPECIES	17	ENSGT00530000063688.a	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00910000147575	ENSGT01100000263539.b.b.b.b.a.a.a.b.b.b	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00940000165497.C.a.a.a.b.a.a	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Crab-eating macaque	MODERN SPECIES	3	ERBB4 (ENSMFAG00000042352) #8	ENSMFAG00000047331 #9	ENSMFAG00000059453	IKZF2 (ENSMFAG00000049387) #10	SPAG16 (ENSMFAG00000036303) #11	ENSMFAG00000056823	VWC2L (ENSMFAG00000004450) #13	BARD1 (ENSMFAG00000032566) #14	ABCA12 (ENSMFAG00000041527) #15	ATIC (ENSMFAG00000044630) #16	FN1 (ENSMFAG00000032168) #17	ENSMFAG00000055847	ENSMFAG00000063886	PECR (ENSMFAG00000003448) #20	TMEM169 (ENSMFAG00000055690) #21	XRCC5 (ENSMFAG00000039293) #22	MARCHF4 (ENSMFAG00000045960) #23	SMARCAL1 (ENSMFAG00000034369) #25	RPL37A (ENSMFAG00000043631) ##26	IGFBP2 (ENSMFAG00000040045) #27	IGFBP5 (ENSMFAG00000040116) #28	ENSMFAG00000042551	ENSMFAG00000060168	ENSMFAG00000064069	TNS1 (ENSMFAG00000041004) #30	RUFY4 (ENSMFAG00000032847) #31	CXCR2 (ENSMFAG00000054938) #32	CXCR1 (ENSMFAG00000047431) #33	ENSMFAG00000062904	ARPC2 (ENSMFAG00000030106) #34	AAMP (ENSMFAG00000034415) #36
Rhesus	MODERN SPECIES	3	CPS1 (ENSMMUG00000010508) #7	ERBB4 (ENSMMUG00000001674) #8	ENSMMUG00000058114 #9	ENSMMUG00000061342	IKZF2 (ENSMMUG00000000381) #10	SPAG16 (ENSMMUG00000000382) #11	ENSMMUG00000064880	ENSMMUG00000065281	VWC2L (ENSMMUG00000054519) #13	BARD1 (ENSMMUG00000005700) #14	ABCA12 (ENSMMUG00000014813) #15	ATIC (ENSMMUG00000012318) #16	FN1 (ENSMMUG00000012321) #17	PECR (ENSMMUG00000017964) #20	TMEM169 (ENSMMUG00000053869) #21	XRCC5 (ENSMMUG00000001927) #22	MARCHF4 (ENSMMUG00000020824) #23	SMARCAL1 (ENSMMUG00000019539) #25	ENSMMUG00000006818	RPL37A (ENSMMUG00000019544) ##26	IGFBP2 (ENSMMUG00000054183) #27	IGFBP5 (ENSMMUG00000041480) #28	ENSMMUG00000063058	TNP1 (ENSMMUG00000019257) #29	ENSMMUG00000065034	TNS1 (ENSMMUG00000013785) #30	RUFY4 (ENSMMUG00000020228) #31	CXCR2 (ENSMMUG00000013400) #32	CXCR1 (ENSMMUG00000019351) #33	ENSMMUG00000056723	ARPC2 (ENSMMUG00000022808) #34
Pig-tailed macaque	MODERN SPECIES	570	LANCL1 (ENSMNEG00000029637)	CPS1 (ENSMNEG00000035547) #7	ENSMNEG00000034167	ENSMNEG00000017162	ERBB4 (ENSMNEG00000041797) #8	IKZF2 (ENSMNEG00000031320) #10	SPAG16 (ENSMNEG00000033132) #11	VWC2L (ENSMNEG00000044264) #13	BARD1 (ENSMNEG00000042003) #14	ABCA12 (ENSMNEG00000031040) #15	ATIC (ENSMNEG00000033660) #16	FN1 (ENSMNEG00000029457) #17	MREG (ENSMNEG00000029517) #19	PECR (ENSMNEG00000043315) #20	TMEM169 (ENSMNEG00000034924) #21	XRCC5 (ENSMNEG00000015360) #22	ENSMNEG00000006764	MARCHF4 (ENSMNEG00000033537) #23	SMARCAL1 (ENSMNEG00000036205) #25	RPL37A (ENSMNEG00000031830) ##26	IGFBP2 (ENSMNEG00000040591) #27	IGFBP5 (ENSMNEG00000035172) #28	ENSMNEG00000031022	ENSMNEG00000011932	ENSMNEG00000034828	TNS1 (ENSMNEG00000042642) #30	ENSMNEG00000043970	RUFY4 (ENSMNEG00000035961) #31	ARPC2 (ENSMNEG00000035269) #34	GPBAR1 (ENSMNEG00000013403) #35	AAMP (ENSMNEG00000021957) #36
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT01030000234570.d.a	ENSGT00510000046986.n.a.d.b	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00390000016988.a.a.a.a.a.b.d ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33
Olive baboon	MODERN SPECIES	1	ERBB4 (ENSPANG00000020599) #8	ENSPANG00000048059	ENSPANG00000050738 #9	IKZF2 (ENSPANG00000016694) #10	SPAG16 (ENSPANG00000011416) #11	ENSPANG00000037591	VWC2L (ENSPANG00000046744) #13	BARD1 (ENSPANG00000019723) #14	ABCA12 (ENSPANG00000005668) #15	ATIC (ENSPANG00000012147) #16	FN1 (ENSPANG00000005725) #17	ENSPANG00000041320	PECR (ENSPANG00000009641) #20	ENSPANG00000042211	TMEM169 (ENSPANG00000018887) #21	XRCC5 (ENSPANG00000016342) #22	MARCHF4 (ENSPANG00000022150) #23	SMARCAL1 (ENSPANG00000017812) #25	ENSPANG00000036088 ##26	IGFBP2 (ENSPANG00000024435) #27	IGFBP5 (ENSPANG00000050266) #28	TNP1 (ENSPANG00000037114) #29	TNS1 (ENSPANG00000009910) #30	RUFY4 (ENSPANG00000007099) #31	CXCR2 (ENSPANG00000037631) #32	CXCR1 (ENSPANG00000040779) #33	ARPC2 (ENSPANG00000000452) #34	GPBAR1 (ENSPANG00000004409) #35	AAMP (ENSPANG00000004935) #36	PNKD (ENSPANG00000005752) #37	TMBIM1 (ENSPANG00000022974)
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00910000147691	ENSGT00910000147161	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00910000147196	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00910000147575	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000183120.e.b.a.b	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36
Sooty mangabey	MODERN SPECIES	663													MREG (ENSCATG00000015636) #19	PECR (ENSCATG00000044472) #20	TMEM169 (ENSCATG00000042533) #21	XRCC5 (ENSCATG00000041011) #22	ENSCATG00000022675	MARCHF4 (ENSCATG00000037390) #23	SMARCAL1 (ENSCATG00000040789) #25	ENSCATG00000032452 #26	IGFBP2 (ENSCATG00000039892) #27	IGFBP5 (ENSCATG00000044314) #28	ENSCATG00000039974	ENSCATG00000043849	ENSCATG00000036554	TNS1 (ENSCATG00000034565) #30	RUFY4 (ENSCATG00000030237) #31	ENSCATG00000042173	ARPC2 (ENSCATG00000032760) #34	GPBAR1 (ENSCATG00000001316) #35	AAMP (ENSCATG00000037132) #36
Drill	MODERN SPECIES	1431											ATIC (ENSMLEG00000036518) #16	FN1 (ENSMLEG00000037150) #17	MREG (ENSMLEG00000032458) #19	PECR (ENSMLEG00000034599) #20	TMEM169 (ENSMLEG00000042960) #21	XRCC5 (ENSMLEG00000041238) #22	ENSMLEG00000027771	MARCHF4 (ENSMLEG00000041332) #23	SMARCAL1 (ENSMLEG00000042894) #25	ENSMLEG00000034025 ##26	IGFBP2 (ENSMLEG00000037660) #27	IGFBP5 (ENSMLEG00000034428) #28	ENSMLEG00000037293	ENSMLEG00000041534	TNS1 (ENSMLEG00000034804) #30	ENSMLEG00000040349	RUFY4 (ENSMLEG00000027570) #31	ARPC2 (ENSMLEG00000016253) #34	GPBAR1 (ENSMLEG00000008525) #35	AAMP (ENSMLEG00000032210) #36	PNKD (ENSMLEG00000042812) #37
Vervet Monkey	MODERN SPECIES	1	ACADL (ENSCSAG00000009898)	MYL1 (ENSCSAG00000009850)	LANCL1 (ENSCSAG00000009844)	CPS1 (ENSCSAG00000009759) #7	ENSCSAG00000009490 #8	ENSCSAG00000009457 #8	IKZF2 (ENSCSAG00000009405) #10	ENSCSAG00000009388 #11	VWC2L (ENSCSAG00000009346) #13	BARD1 (ENSCSAG00000009338) #14	ABCA12 (ENSCSAG00000009303) #15	FN1 (ENSCSAG00000009162) #17	MREG (ENSCSAG00000009131) #19	PECR (ENSCSAG00000009122) #20	TMEM169 (ENSCSAG00000009111) #21	XRCC5 (ENSCSAG00000009095) #22	MARCHF4 (ENSCSAG00000009072) #23	SMARCAL1 (ENSCSAG00000009061) #25	IGFBP2 (ENSCSAG00000009048) #27	IGFBP5 (ENSCSAG00000009041) #28	TNP1 (ENSCSAG00000009030) #29	ENSCSAG00000009019	ENSCSAG00000009002	TNS1 (ENSCSAG00000008987) #30	RUFY4 (ENSCSAG00000008961) #31	CXCR2 (ENSCSAG00000018774) #32	CXCR1 (ENSCSAG00000018775) #33	ARPC2 (ENSCSAG00000008943) #34	GPBAR1 (ENSCSAG00000018778) #35	ENSCSAG00000008920 #36	PNKD (ENSCSAG00000008892) #37
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00910000147691	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.m.a.b #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A.a #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00390000002752.x.d	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00560000078504	ENSGT00910000147456	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33
Cebidae	ANCESTRAL SPECIES	11	ENSGT00530000063688.a	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.m.a.b #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A.a #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00390000002752.x.d	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b.mb.a.b #34	ENSGT00390000010256 #35
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00530000063688.a	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.m.a.b #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A.a #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00550000074820.h.cb	ENSGT00940000158542 #27	ENSGT00390000002752.x.d	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.b.mb.a.a #34	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Capuchin	MODERN SPECIES	89	ERBB4 (ENSCCAG00000036465) #8	ENSCCAG00000016584	IKZF2 (ENSCCAG00000029869) #10	SPAG16 (ENSCCAG00000027929) #11	VWC2L (ENSCCAG00000021422) #13	BARD1 (ENSCCAG00000021151) #14	ENSCCAG00000020726	ABCA12 (ENSCCAG00000029993) #15	ENSCCAG00000022620 #16	FN1 (ENSCCAG00000021281) #17	MREG (ENSCCAG00000034986) #19	ENSCCAG00000031458	PECR (ENSCCAG00000028783) #20	TMEM169 (ENSCCAG00000030518) #21	ENSCCAG00000020388	XRCC5 (ENSCCAG00000027147) #22	MARCHF4 (ENSCCAG00000031877) #23	ASNA1 (ENSCCAG00000020440)	SMARCAL1 (ENSCCAG00000022646) #25	ENSCCAG00000021500 ##26	ENSCCAG00000020405	IGFBP2 (ENSCCAG00000032963) #27	ENSCCAG00000033782	IGFBP5 (ENSCCAG00000035731) #28	TNP1 (ENSCCAG00000030466) #29	TNS1 (ENSCCAG00000037646) #30	RUFY4 (ENSCCAG00000036887) #31
Bolivian squirrel monkey	MODERN SPECIES	56	KANSL1L (ENSSBOG00000033776)	MYL1 (ENSSBOG00000033791)	LANCL1 (ENSSBOG00000020922)	CPS1 (ENSSBOG00000001070) #7	ERBB4 (ENSSBOG00000030062) #8	IKZF2 (ENSSBOG00000020703) #10	SPAG16 (ENSSBOG00000028079) #11	VWC2L (ENSSBOG00000027487) #13	BARD1 (ENSSBOG00000024817) #14	ABCA12 (ENSSBOG00000021012) #15	ATIC (ENSSBOG00000035246) #16	FN1 (ENSSBOG00000030941) #17	MREG (ENSSBOG00000030269) #19	ENSSBOG00000022001	TMEM169 (ENSSBOG00000035035) #21	XRCC5 (ENSSBOG00000029325) #22	MARCHF4 (ENSSBOG00000031621) #23	SMARCAL1 (ENSSBOG00000023338) #25	RPL37A (ENSSBOG00000032570) ##26	ENSSBOG00000021060	ENSSBOG00000019110 #27	ENSSBOG00000030539	IGFBP5 (ENSSBOG00000019704) #28	TNP1 (ENSSBOG00000033620) #29	ENSSBOG00000029951	ENSSBOG00000033112	TNS1 (ENSSBOG00000022703) #30	RUFY4 (ENSSBOG00000002350) #31	ENSSBOG00000032077 #34	AAMP (ENSSBOG00000023993) #36	TMBIM1 (ENSSBOG00000029929)
Marmoset	MODERN SPECIES	18	ENSCJAG00000075827	ENSCJAG00000058419	ENSCJAG00000083858	VWC2L (ENSCJAG00000052055) #13	ENSCJAG00000040361	BARD1 (ENSCJAG00000011473) #14	ENSCJAG00000082638	ABCA12 (ENSCJAG00000011510) #15	ENSCJAG00000072179	ENSCJAG00000011695 #16	FN1 (ENSCJAG00000011714) #17	ENSCJAG00000083626	MREG (ENSCJAG00000037790) #19	PECR (ENSCJAG00000012258) #20	TMEM169 (ENSCJAG00000068065) #21	XRCC5 (ENSCJAG00000012291) #22	MARCHF4 (ENSCJAG00000012374) #23	SMARCAL1 (ENSCJAG00000012377) #25	ENSCJAG00000057313 #26	IGFBP2 (ENSCJAG00000012426) #27	IGFBP5 (ENSCJAG00000062900) #28	TNP1 (ENSCJAG00000012458) #29	ENSCJAG00000079433	ENSCJAG00000080758	TNS1 (ENSCJAG00000018487) #30	ENSCJAG00000071965	RUFY4 (ENSCJAG00000018480) #31	CXCR2 (ENSCJAG00000000744) #32	CXCR1 (ENSCJAG00000046986) #33	ARPC2 (ENSCJAG00000010746) #34	GPBAR1 (ENSCJAG00000022440) #35
Mas night monkey	MODERN SPECIES	357	ENSANAG00000033281	ENSANAG00000036535	CPS1 (ENSANAG00000036815) #7	ERBB4 (ENSANAG00000034026) #8	IKZF2 (ENSANAG00000020083) #10	SPAG16 (ENSANAG00000021194) #11	VWC2L (ENSANAG00000022669) #13	ENSANAG00000034992	BARD1 (ENSANAG00000026965) #14	ABCA12 (ENSANAG00000035285) #15	ENSANAG00000020375 #16	FN1 (ENSANAG00000027282) #17	ENSANAG00000026766 #19	PECR (ENSANAG00000020624) #20	TMEM169 (ENSANAG00000022360) #21	XRCC5 (ENSANAG00000028373) #22	ENSANAG00000035228	MARCHF4 (ENSANAG00000027574) #23	SMARCAL1 (ENSANAG00000034980) #25	ENSANAG00000033950 ##26	ENSANAG00000034888	IGFBP2 (ENSANAG00000024221) #27	ENSANAG00000037097	IGFBP5 (ENSANAG00000025346) #28	ENSANAG00000007590	TNP1 (ENSANAG00000029968) #29	ENSANAG00000031237	ENSANAG00000026120	TNS1 (ENSANAG00000019397) #30	RUFY4 (ENSANAG00000022643) #31	CXCR2 (ENSANAG00000027046) #32
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153239.A.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153239.A.b #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153239.A.b #22
Bolivian squirrel monkey	MODERN SPECIES	89	ART3 (ENSSBOG00000026696)	CXCL11 (ENSSBOG00000022539)	CXCL10 (ENSSBOG00000017069)	CXCL9 (ENSSBOG00000033691)	ENSSBOG00000021225	SDAD1 (ENSSBOG00000030348)	NAAA (ENSSBOG00000023819)	PPEF2 (ENSSBOG00000015019)	USO1 (ENSSBOG00000027001)	ENSSBOG00000023693	CDKL2 (ENSSBOG00000035557)	ENSSBOG00000030615	THAP6 (ENSSBOG00000027530)	ENSSBOG00000023675	RCHY1 (ENSSBOG00000016835)	ENSSBOG00000019810 #22	PARM1 (ENSSBOG00000034268)	BTC (ENSSBOG00000002013)	ENSSBOG00000014814	AREG (ENSSBOG00000005982)	EREG (ENSSBOG00000022697)	EPGN (ENSSBOG00000034341)	MTHFD2L (ENSSBOG00000015048)	ENSSBOG00000032845	CXCL5 (ENSSBOG00000033036)	PPBP (ENSSBOG00000026341)	ENSSBOG00000024586	ENSSBOG00000022173	ENSSBOG00000030749	CXCL6 (ENSSBOG00000028174)	CXCL8 (ENSSBOG00000020586)
Tarsier	MODERN SPECIES	3862															TMEM169 (ENSTSYG00000013424) #21	XRCC5 (ENSTSYG00000013981) #22	MARCHF4 (ENSTSYG00000027658) #23	SMARCAL1 (ENSTSYG00000005897) #25
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295.e #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295.e #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Mouse lemur	MODERN SPECIES	30	CPS1 (ENSMICG00000010886) #7	ERBB4 (ENSMICG00000036699) #8	ENSMICG00000037305	IKZF2 (ENSMICG00000013862) #10	ATIC (ENSMICG00000014573) #16	ENSMICG00000043031	SPAG16 (ENSMICG00000013876) #11	VWC2L (ENSMICG00000034610) #13	BARD1 (ENSMICG00000014488) #14	ABCA12 (ENSMICG00000014502) #15	ENSMICG00000044310 #16	FN1 (ENSMICG00000014594) #17	MREG (ENSMICG00000033346) #19	PECR (ENSMICG00000036951) #20	TMEM169 (ENSMICG00000044265) #21	XRCC5 (ENSMICG00000008946) #22	MARCHF4 (ENSMICG00000027749) #23	SMARCAL1 (ENSMICG00000008967) #25	RPL37A (ENSMICG00000008988) #26	IGFBP2 (ENSMICG00000008989) #27	IGFBP5 (ENSMICG00000028205) #28	TNP1 (ENSMICG00000045994) #29	ENSMICG00000035435	TNS1 (ENSMICG00000017467) #30	ENSMICG00000043345 #32	ENSMICG00000046166 #32	ENSMICG00000042714 #31	CXCR1 (ENSMICG00000047045) #33	ENSMICG00000006821 #34	AAMP (ENSMICG00000006828) #36	TMBIM1 (ENSMICG00000006846)
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295.f #15	ENSGT00940000157295.e #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a.g.a #32	ENSGT01050000244848.A.a.g.b #33	ENSGT00940000154044.a.b #31	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	575	ZNF154 (ENSPCOG00000004725)	ZNF551 (ENSPCOG00000018336)	ENSPCOG00000005762	ENSPCOG00000020264	ZNF134 (ENSPCOG00000017994)	ZNF530 (ENSPCOG00000004397)	ZIK1 (ENSPCOG00000014819)	ENSPCOG00000001056	ENSPCOG00000022694	ZNF550 (ENSPCOG00000018751)	ZNF549 (ENSPCOG00000017125)	ZNF773 (ENSPCOG00000016975)	ZNF772 (ENSPCOG00000005732)	ZNF548 (ENSPCOG00000025018)	ZNF547 (ENSPCOG00000016552)	ENSPCOG00000016243 #22	ZNF304 (ENSPCOG00000005970)	ZNF543 (ENSPCOG00000028468)	ZNF460 (ENSPCOG00000018058)	ZNF805 (ENSPCOG00000013996)	ENSPCOG00000013049	ENSPCOG00000027052	DUXA (ENSPCOG00000028197)	USP29 (ENSPCOG00000022836)	PEG3 (ENSPCOG00000017786)	ENSPCOG00000009160	ENSPCOG00000025391	SMIM17 (ENSPCOG00000027162)	ZNF470 (ENSPCOG00000024975)	ZFP28 (ENSPCOG00000016282)	ENSPCOG00000000427
Coquerels sifaka	MODERN SPECIES	500								VWC2L (ENSPCOG00000001080) #13	BARD1 (ENSPCOG00000001956) #14	ABCA12 (ENSPCOG00000022336) #15	ATIC (ENSPCOG00000024839) #16	FN1 (ENSPCOG00000024595) #17	MREG (ENSPCOG00000016864) #19	PECR (ENSPCOG00000014454) #20	TMEM169 (ENSPCOG00000013793) #21	ENSPCOG00000013913 #22	MARCHF4 (ENSPCOG00000021290) #23
Greater bamboo lemur	MODERN SPECIES	286										ENSPSMG00000022366 #15	ATIC (ENSPSMG00000022440) #16	FN1 (ENSPSMG00000023478) #17	MREG (ENSPSMG00000024130) #19	PECR (ENSPSMG00000024139) #20	TMEM169 (ENSPSMG00000024143) #21	XRCC5 (ENSPSMG00000024196) #22	MARCHF4 (ENSPSMG00000024227) #23	SMARCAL1 (ENSPSMG00000024240) #25	RPL37A (ENSPSMG00000024269) #26	IGFBP2 (ENSPSMG00000024277) #27	IGFBP5 (ENSPSMG00000024289) #28	TNS1 (ENSPSMG00000024558) #30	ENSPSMG00000024666 #32	CXCR1 (ENSPSMG00000024669) #33	ARPC2 (ENSPSMG00000024679) #34	GPBAR1 (ENSPSMG00000024691) #35	AAMP (ENSPSMG00000024724) #36	PNKD (ENSPSMG00000024742) #37	TMBIM1 (ENSPSMG00000024758)	CATIP (ENSPSMG00000024776)	SLC11A1 (ENSPSMG00000024786)
Bushbaby	MODERN SPECIES	128	MYL1 (ENSOGAG00000009848)	LANCL1 (ENSOGAG00000005620)	CPS1 (ENSOGAG00000005623) #7	ENSOGAG00000028178 #8	ENSOGAG00000010768 #8	IKZF2 (ENSOGAG00000016680) #10	VWC2L (ENSOGAG00000004042) #13	BARD1 (ENSOGAG00000009078) #14	ABCA12 (ENSOGAG00000016828) #15	ATIC (ENSOGAG00000005039) #16	FN1 (ENSOGAG00000005042) #17	MREG (ENSOGAG00000002252) #19	PECR (ENSOGAG00000004437) #20	TMEM169 (ENSOGAG00000004438) #21	ENSOGAG00000032096	XRCC5 (ENSOGAG00000001977) #22	MARCHF4 (ENSOGAG00000028676) #23	SMARCAL1 (ENSOGAG00000001980) #25	ENSOGAG00000000817 #26	ENSOGAG00000031606	IGFBP2 (ENSOGAG00000003363) #27	IGFBP5 (ENSOGAG00000024780) #28	TNP1 (ENSOGAG00000008996) #29	TNS1 (ENSOGAG00000016508) #30	ENSOGAG00000013845 #32	RUFY4 (ENSOGAG00000013282) #31	ENSOGAG00000016216 #32	CXCR1 (ENSOGAG00000013847) #33	ENSOGAG00000013848 #34	GPBAR1 (ENSOGAG00000001787) #35	AAMP (ENSOGAG00000001788) #36
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153239.A #22
Hedgehog	MODERN SPECIES	8844																XRCC5 (ENSEEUG00000005288) #22
Common shrew	MODERN SPECIES	6721																XRCC5 (ENSSARG00000005363) #22
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Carnivora	ANCESTRAL SPECIES	17	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Felidae	ANCESTRAL SPECIES	15	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.w #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.w ##33	ENSGT01050000244848.A.a.h.x ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Panthera	ANCESTRAL SPECIES	9	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.w #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.w ##33	ENSGT01050000244848.A.a.h.x ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.w #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.w ##33	ENSGT01050000244848.A.a.h.x ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055
lion	MODERN SPECIES	8	MYL1 (ENSPLOG00000022732)	LANCL1 (ENSPLOG00000022731)	CPS1 (ENSPLOG00000022730) #7	ERBB4 (ENSPLOG00000022728) #8	IKZF2 (ENSPLOG00000022726) #10	SPAG16 (ENSPLOG00000022723) #11	VWC2L (ENSPLOG00000022722) #13	ENSPLOG00000022721	BARD1 (ENSPLOG00000022720) #14	ABCA12 (ENSPLOG00000022719) #15	ATIC (ENSPLOG00000022715) #16	FN1 (ENSPLOG00000022449) #17	MREG (ENSPLOG00000022108) #19	PECR (ENSPLOG00000022096) #20	TMEM169 (ENSPLOG00000022080) #21	XRCC5 (ENSPLOG00000022030) #22	MARCHF4 (ENSPLOG00000022004) #23	SMARCAL1 (ENSPLOG00000021859) #25	RPL37A (ENSPLOG00000021827) ##26	IGFBP2 (ENSPLOG00000021792) #27	IGFBP5 (ENSPLOG00000021770) #28	TNP1 (ENSPLOG00000021749) #29	ENSPLOG00000021740	TNS1 (ENSPLOG00000021451) #30	RUFY4 (ENSPLOG00000021337) #31	ENSPLOG00000021316 ##33	ENSPLOG00000021306 ##33	ARPC2 (ENSPLOG00000021264) #34	GPBAR1 (ENSPLOG00000021239) #35	AAMP (ENSPLOG00000021079) #36	TMBIM1 (ENSPLOG00000020963)
leopard	MODERN SPECIES	12	MYL1 (ENSPPRG00000014175)	LANCL1 (ENSPPRG00000014545)	CPS1 (ENSPPRG00000017782) #7	ERBB4 (ENSPPRG00000021619) #8	IKZF2 (ENSPPRG00000022962) #10	SPAG16 (ENSPPRG00000000338) #11	VWC2L (ENSPPRG00000000428) #13	BARD1 (ENSPPRG00000000936) #14	ABCA12 (ENSPPRG00000002284) #15	ENSPPRG00000002551 #16	FN1 (ENSPPRG00000009716) #17	MREG (ENSPPRG00000010221) #19	ENSPPRG00000010384 #20	ENSPPRG00000010418 #20	TMEM169 (ENSPPRG00000010457) #21	XRCC5 (ENSPPRG00000011769) #22	MARCHF4 (ENSPPRG00000011970) #23	SMARCAL1 (ENSPPRG00000012487) #25	RPL37A (ENSPPRG00000012681) ##26	IGFBP2 (ENSPPRG00000012975) #27	IGFBP5 (ENSPPRG00000013098) #28	TNP1 (ENSPPRG00000013133) #29	TNS1 (ENSPPRG00000016737) #30	RUFY4 (ENSPPRG00000021039) #31	ENSPPRG00000021734 ##33	ENSPPRG00000021746 ##33	ARPC2 (ENSPPRG00000022071) #34	GPBAR1 (ENSPPRG00000021788) #35	AAMP (ENSPPRG00000023914) #36	ENSPPRG00000023854	TMBIM1 (ENSPPRG00000023780)
Tiger	MODERN SPECIES	240	ACADL (ENSPTIG00000009876)	MYL1 (ENSPTIG00000012214)	LANCL1 (ENSPTIG00000012768)	CPS1 (ENSPTIG00000013483) #7	ERBB4 (ENSPTIG00000007031) #8	IKZF2 (ENSPTIG00000021209) #10	SPAG16 (ENSPTIG00000022030) #11	VWC2L (ENSPTIG00000022118) #13	BARD1 (ENSPTIG00000002607) #14	ABCA12 (ENSPTIG00000006592) #15	ATIC (ENSPTIG00000015356) #16	FN1 (ENSPTIG00000019902) #17	MREG (ENSPTIG00000014793) #19	PECR (ENSPTIG00000015470) #20	TMEM169 (ENSPTIG00000015999) #21	XRCC5 (ENSPTIG00000016510) #22	MARCHF4 (ENSPTIG00000020170) #23	SMARCAL1 (ENSPTIG00000020732) #25	RPL37A (ENSPTIG00000021853) ##26	IGFBP2 (ENSPTIG00000022009) #27	IGFBP5 (ENSPTIG00000001085) #28	TNP1 (ENSPTIG00000003475) #29	TNS1 (ENSPTIG00000004935) #30	RUFY4 (ENSPTIG00000016982) #31	ENSPTIG00000005017 ##33	ENSPTIG00000005030 ##33	ARPC2 (ENSPTIG00000019063) #34	AAMP (ENSPTIG00000019616) #36	PNKD (ENSPTIG00000021040) #37	TMBIM1 (ENSPTIG00000000242)	CATIP (ENSPTIG00000003791)
Cat	MODERN SPECIES	239	CPS1 (ENSFCAG00000027460) #7	ERBB4 (ENSFCAG00000027902) #8	IKZF2 (ENSFCAG00000036602) #10	ENSFCAG00000048148	SPAG16 (ENSFCAG00000015155) #11	ENSFCAG00000032010	ENSFCAG00000034149	VWC2L (ENSFCAG00000015156) #13	BARD1 (ENSFCAG00000010312) #14	ABCA12 (ENSFCAG00000009215) #15	ATIC (ENSFCAG00000009216) #16	FN1 (ENSFCAG00000009217) #17	MREG (ENSFCAG00000042915) #19	PECR (ENSFCAG00000029466) #20	TMEM169 (ENSFCAG00000038551) #21	XRCC5 (ENSFCAG00000019248) #22	MARCHF4 (ENSFCAG00000009376) #23	SMARCAL1 (ENSFCAG00000009377) #25	ENSFCAG00000037481 ##26	IGFBP2 (ENSFCAG00000004465) #27	IGFBP5 (ENSFCAG00000021980) #28	TNP1 (ENSFCAG00000036860) #29	TNS1 (ENSFCAG00000001073) #30	RUFY4 (ENSFCAG00000002367) #31	ENSFCAG00000023545 ##33	ENSFCAG00000026553 ##33	ARPC2 (ENSFCAG00000002370) #34	GPBAR1 (ENSFCAG00000035028) #35	AAMP (ENSFCAG00000002372) #36	PNKD (ENSFCAG00000002373) #37	TMBIM1 (ENSFCAG00000002374)
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Canidae	ANCESTRAL SPECIES	20	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553.u #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.i #20	ENSGT00390000015276.m #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000167978	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.u ##33	ENSGT01050000244848.A.a.h.v ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Canis_lupus	ANCESTRAL SPECIES	32	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT01030000235022.a.b	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.m #14	ENSGT00940000157295 #15	ENSGT00390000004553.u #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.i.a #20	ENSGT00390000015276.m #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000167978	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.u ##33	ENSGT01050000244848.A.a.h.v ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055
Dog	MODERN SPECIES	30	CPS1 (ENSCAFG00845017752) #7	LANCL1 (ENSCAFG00845018274)	ENSCAFG00845018381	ENSCAFG00845018409	ERBB4 (ENSCAFG00845018700) #8	IKZF2 (ENSCAFG00845019777) #10	SPAG16 (ENSCAFG00845020068) #11	VWC2L (ENSCAFG00845020176) #13	ENSCAFG00845020407 #14	ABCA12 (ENSCAFG00845020774) #15	ATIC (ENSCAFG00845021597) #16	FN1 (ENSCAFG00845021985) #17	MREG (ENSCAFG00845023465) #19	PECR (ENSCAFG00845023539) #20	TMEM169 (ENSCAFG00845023607) #21	XRCC5 (ENSCAFG00845023719) #22	MARCHF4 (ENSCAFG00845024325) #23	SMARCAL1 (ENSCAFG00845024403) #25	RPL37A (ENSCAFG00845024724)	IGFBP2 (ENSCAFG00845024863) #27	IGFBP5 (ENSCAFG00845024936) #28	TNP1 (ENSCAFG00845025043) #29	TNS1 (ENSCAFG00845025209) #30	RUFY4 (ENSCAFG00845026363) #31	CXCR2 (ENSCAFG00845026443) ##33	ENSCAFG00845026477 ##33	ARPC2 (ENSCAFG00845026524) #34	GPBAR1 (ENSCAFG00845026665) #35	AAMP (ENSCAFG00845026688) #36	PNKD (ENSCAFG00845026766) #37	TMBIM1 (ENSCAFG00845026892)
Dingo	MODERN SPECIES	398	MYL1 (ENSCAFG00020027336)	LANCL1 (ENSCAFG00020027334)	CPS1 (ENSCAFG00020027329) #7	ENSCAFG00020027327	ERBB4 (ENSCAFG00020027318) #8	IKZF2 (ENSCAFG00020027304) #10	ENSCAFG00020027302 #11	VWC2L (ENSCAFG00020027301) #13	ENSCAFG00020027297 #14	ABCA12 (ENSCAFG00020027288) #15	ENSCAFG00020027231 #16	FN1 (ENSCAFG00020027194) #17	MREG (ENSCAFG00020027154) #19	ENSCAFG00020027150 #20	ENSCAFG00020027149 #21	XRCC5 (ENSCAFG00020027148) #22	MARCHF4 (ENSCAFG00020027147) #23	SMARCAL1 (ENSCAFG00020027146) #25	ENSCAFG00020027145	IGFBP2 (ENSCAFG00020027144) #27	IGFBP5 (ENSCAFG00020027142) #28	TNP1 (ENSCAFG00020027140) #29	ENSCAFG00020027127 #30	ENSCAFG00020027115 #30	RUFY4 (ENSCAFG00020027113) #31	ENSCAFG00020027111 ##33	ENSCAFG00020027108 ##33	ARPC2 (ENSCAFG00020027106) #34	GPBAR1 (ENSCAFG00020027104) #35	AAMP (ENSCAFG00020027101) #36	ENSCAFG00020027098
Red fox	MODERN SPECIES	39	LANCL1 (ENSVVUG00000009273)	CPS1 (ENSVVUG00000009235) #7	ENSVVUG00000009222	ERBB4 (ENSVVUG00000009194) #8	IKZF2 (ENSVVUG00000009142) #10	ENSVVUG00000009126 #11	VWC2L (ENSVVUG00000009113) #13	BARD1 (ENSVVUG00000009080) #14	ABCA12 (ENSVVUG00000009005) #15	ATIC (ENSVVUG00000008989) #16	FN1 (ENSVVUG00000008974) #17	ENSVVUG00000008967	MREG (ENSVVUG00000008966) #19	ENSVVUG00000008964 #20	TMEM169 (ENSVVUG00000008962) #21	XRCC5 (ENSVVUG00000007761) #22	MARCH4 (ENSVVUG00000007709) #23	SMARCAL1 (ENSVVUG00000007658) #25	ENSVVUG00000007642	IGFBP2 (ENSVVUG00000007623) #27	IGFBP5 (ENSVVUG00000007604) #28	TNP1 (ENSVVUG00000007592) #29	TNS1 (ENSVVUG00000007426) #30	RUFY4 (ENSVVUG00000007396) #31	ENSVVUG00000007393 ##33	ENSVVUG00000007390 ##33	ARPC2 (ENSVVUG00000007377) #34	GPBAR1 (ENSVVUG00000007375) #35	AAMP (ENSVVUG00000007372) #36	TMBIM1 (ENSVVUG00000007365)	PNKD (ENSVVUG00000007348) #37
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.l #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000157652	ENSGT01030000234570.d.a.c.b	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.l #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.s ##33	ENSGT01050000244848.A.a.h.t ##33	ENSGT01000000214669	ENSGT00390000016794.b #34	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36
Ursus	ANCESTRAL SPECIES	12								ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.l #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.s ##33	ENSGT01050000244848.A.a.h.t ##33	ENSGT00390000016794.b #34	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37
Polar bear	MODERN SPECIES	169								VWC2L (ENSUMAG00000001034) #13	BARD1 (ENSUMAG00000000925) #14	ABCA12 (ENSUMAG00000000511) #15	ATIC (ENSUMAG00000000497) #16	FN1 (ENSUMAG00000000466) #17	MREG (ENSUMAG00000000450) #19	PECR (ENSUMAG00000000160) #20	TMEM169 (ENSUMAG00000000084) #21	XRCC5 (ENSUMAG00000020179) #22	MARCHF4 (ENSUMAG00000020173) #23	SMARCAL1 (ENSUMAG00000020164) #25	RPL37A (ENSUMAG00000020158) ##26	IGFBP2 (ENSUMAG00000020155) #27	IGFBP5 (ENSUMAG00000020139) #28	TNP1 (ENSUMAG00000020130) #29	TNS1 (ENSUMAG00000019767) #30	RUFY4 (ENSUMAG00000019692) #31	ENSUMAG00000019690 ##33	ENSUMAG00000019687 ##33	ARPC2 (ENSUMAG00000019684) #34	AAMP (ENSUMAG00000019658) #36	TMBIM1 (ENSUMAG00000019650)	PNKD (ENSUMAG00000019639) #37	CATIP (ENSUMAG00000019632)
American black bear	MODERN SPECIES	7698															TMEM169 (ENSUAMG00000003914) #21	XRCC5 (ENSUAMG00000003927) #22
Giant Panda	MODERN SPECIES	11	ACADL (ENSAMEG00000004978)	MYL1 (ENSAMEG00000005031)	LANCL1 (ENSAMEG00000005046)	CPS1 (ENSAMEG00000005080) #7	ERBB4 (ENSAMEG00000007301) #8	IKZF2 (ENSAMEG00000008058) #10	SPAG16 (ENSAMEG00000008081) #11	VWC2L (ENSAMEG00000003842) #13	BARD1 (ENSAMEG00000003804) #14	ABCA12 (ENSAMEG00000003679) #15	ATIC (ENSAMEG00000003629) #16	FN1 (ENSAMEG00000003517) #17	MREG (ENSAMEG00000026110) #19	PECR (ENSAMEG00000003490) #20	TMEM169 (ENSAMEG00000026744) #21	XRCC5 (ENSAMEG00000003422) #22	MARCHF4 (ENSAMEG00000003418) #23	SMARCAL1 (ENSAMEG00000003379) #25	RPL37A (ENSAMEG00000003377) ##26	IGFBP2 (ENSAMEG00000003374) #27	IGFBP5 (ENSAMEG00000027149) #28	TNP1 (ENSAMEG00000003356) #29	TNS1 (ENSAMEG00000003235) #30	ENSAMEG00000024718 #30	RUFY4 (ENSAMEG00000003231) #31	ENSAMEG00000024818 ##33	ENSAMEG00000027084 ##33	ENSAMEG00000031447 ##33	ENSAMEG00000003220	ARPC2 (ENSAMEG00000003197) #34	GPBAR1 (ENSAMEG00000027970) #35
Mustelinae	ANCESTRAL SPECIES	35														ENSGT00940000156882.l #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799	ENSGT01040000240451.a.a
American mink	MODERN SPECIES	538															TMEM169 (ENSNVIG00000005401) #21	XRCC5 (ENSNVIG00000005222) #22	MARCHF4 (ENSNVIG00000005207) #23	SMAL1 (ENSNVIG00000005129) #25	ENSNVIG00000005124 #26	ENSNVIG00000005115 #27	ENSNVIG00000005104 #27	IGFBP5 (ENSNVIG00000005097) #28	TNP1 (ENSNVIG00000005093) #29
Ferret	MODERN SPECIES	253														ENSMPUG00000016462 #20	TMEM169 (ENSMPUG00000016463) #21	XRCC5 (ENSMPUG00000016464) #22	MARCHF4 (ENSMPUG00000016485) #23	SMARCAL1 (ENSMPUG00000016486) #25	ENSMPUG00000016488 ##26	IGFBP2 (ENSMPUG00000016489) #27	IGFBP5 (ENSMPUG00000016499) #28	ENSMPUG00000016500	TNP1 (ENSMPUG00000016502) #29	TNS1 (ENSMPUG00000016505) #30	RUFY4 (ENSMPUG00000016509) #31	ENSMPUG00000019616 ##33	ENSMPUG00000016511 ##33	ARPC2 (ENSMPUG00000016512) #34	GPBAR1 (ENSMPUG00000019618) #35	AAMP (ENSMPUG00000016514) #36	TMBIM1 (ENSMPUG00000016517)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT00940000157652.f	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Chiroptera	ANCESTRAL SPECIES	11	ENSGT00940000157652.f	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT00940000157652.f	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055
Microbat	MODERN SPECIES	940	CPS1 (ENSMLUG00000015090) #7	ENSMLUG00000016092 #8	ENSMLUG00000022171 #8	ENSMLUG00000023988 #8	IKZF2 (ENSMLUG00000012494) #10	ENSMLUG00000024505 #10	ENSMLUG00000004039 #11	VWC2L (ENSMLUG00000004050) #13	BARD1 (ENSMLUG00000014140) #14	ABCA12 (ENSMLUG00000014147) #15	ATIC (ENSMLUG00000001830) #16	FN1 (ENSMLUG00000001838) #17	MREG (ENSMLUG00000013643) #19	PECR (ENSMLUG00000013650) #20	TMEM169 (ENSMLUG00000009531) #21	XRCC5 (ENSMLUG00000013661) #22	MARCHF4 (ENSMLUG00000013680) #23	ENSMLUG00000025408	SMARCAL1 (ENSMLUG00000001370) #25	ENSMLUG00000000762 #26	IGFBP2 (ENSMLUG00000000766) #27	IGFBP5 (ENSMLUG00000025891) #28	TNP1 (ENSMLUG00000000771) #29	TNS1 (ENSMLUG00000007467) #30	ENSMLUG00000004877 #31	ENSMLUG00000004884 ##33	ENSMLUG00000027148	ENSMLUG00000024395	ENSMLUG00000004161 #34	GPBAR1 (ENSMLUG00000004103) #35	AAMP (ENSMLUG00000004115) #36
Greater horseshoe bat	MODERN SPECIES	26	ENSRFEG00010018450	ERBB4 (ENSRFEG00010017623) #8	ENSRFEG00010017581	ENSRFEG00010017533 #9	IKZF2 (ENSRFEG00010017362) #10	ENSRFEG00010017326	SPAG16 (ENSRFEG00010017261) #11	VWC2L (ENSRFEG00010017204) #13	BARD1 (ENSRFEG00010016379) #14	ABCA12 (ENSRFEG00010014979) #15	ATIC (ENSRFEG00010014882) #16	FN1 (ENSRFEG00010014248) #17	MREG (ENSRFEG00010014124) #19	PECR (ENSRFEG00010014067) #20	TMEM169 (ENSRFEG00010014015) #21	XRCC5 (ENSRFEG00010013923) #22	MARCHF4 (ENSRFEG00010013760) #23	SMARCAL1 (ENSRFEG00010013666) #25	RPL37A (ENSRFEG00010013449) ##26	ENSRFEG00010013429	IGFBP2 (ENSRFEG00010013360) #27	IGFBP5 (ENSRFEG00010013314) #28	TNP1 (ENSRFEG00010013265) #29	TNS1 (ENSRFEG00010012495) #30	RUFY4 (ENSRFEG00010012383) #31	ENSRFEG00010012351 ##33	ENSRFEG00010012292	ENSRFEG00010012266 ##33	ARPC2 (ENSRFEG00010012227) #34	GPBAR1 (ENSRFEG00010012194) #35	AAMP (ENSRFEG00010011746) #36
Megabat	MODERN SPECIES	3409																XRCC5 (ENSPVAG00000014557) #22	MARCHF4 (ENSPVAG00000014559) #23
Equus	ANCESTRAL SPECIES	51	ENSGT00940000157652.e	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37
Horse	MODERN SPECIES	27	ENSECAG00000049241	CPS1 (ENSECAG00000028289) #7	ERBB4 (ENSECAG00000022865) #8	ENSECAG00000039974	IKZF2 (ENSECAG00000032639) #10	SPAG16 (ENSECAG00000000274) #11	ENSECAG00000056274	VWC2L (ENSECAG00000001965) #13	BARD1 (ENSECAG00000002113) #14	ABCA12 (ENSECAG00000009468) #15	ATIC (ENSECAG00000014653) #16	FN1 (ENSECAG00000000701) #17	MREG (ENSECAG00000052438) #19	PECR (ENSECAG00000013131) #20	TMEM169 (ENSECAG00000015399) #21	XRCC5 (ENSECAG00000015940) #22	MARCHF4 (ENSECAG00000007360) #23	SMARCAL1 (ENSECAG00000007683) #25	RPL37A (ENSECAG00000030892) ##26	IGFBP2 (ENSECAG00000035279) #27	IGFBP5 (ENSECAG00000013425) #28	ENSECAG00000054451	TNP1 (ENSECAG00000014618) #29	TNS1 (ENSECAG00000014711) #30	RUFY4 (ENSECAG00000011221) #31	ENSECAG00000006595 ##33	ARPC2 (ENSECAG00000011456) #34	GPBAR1 (ENSECAG00000006763) #35	AAMP (ENSECAG00000014821) #36	PNKD (ENSECAG00000013322) #37	TMBIM1 (ENSECAG00000011922)
Donkey	MODERN SPECIES	10					ENSEASG00005013381 #8	IKZF2 (ENSEASG00005013374) #10	ENSEASG00005013370 #11	VWC2L (ENSEASG00005013364) #13	BARD1 (ENSEASG00005013363) #14	ABCA12 (ENSEASG00005013342) #15	ATIC (ENSEASG00005013331) #16	FN1 (ENSEASG00005012814) #17	MREG (ENSEASG00005028536) #19	PECR (ENSEASG00005012695) #20	TMEM169 (ENSEASG00005035772) #21	XRCC5 (ENSEASG00005012633) #22	MARCHF4 (ENSEASG00005012582) #23	SMARCAL1 (ENSEASG00005012579) #25	RPL37A (ENSEASG00005012575) ##26	ENSEASG00005030571	IGFBP2 (ENSEASG00005012571) #27	ENSEASG00005012566 #28	ENSEASG00005025318 #29	ENSEASG00005012541 #30	RUFY4 (ENSEASG00005012495) #31	ENSEASG00005025425 ##33	ENSEASG00005035202 ##33	ARPC2 (ENSEASG00005012481) #34	GPBAR1 (ENSEASG00005012478) #35	AAMP (ENSEASG00005012433) #36	ENSEASG00005031536
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Suina	ANCESTRAL SPECIES	3	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055	ENSGT01050000244890.a.b.a
Chacoan peccary	MODERN SPECIES	940	ENSCWAG00000011755	ENSCWAG00000011727	ENSCWAG00000011700	ERBB4 (ENSCWAG00000010989) #8	ENSCWAG00000010926 #9	IKZF2 (ENSCWAG00000010504) #10	SPAG16 (ENSCWAG00000010324) #11	VWC2L (ENSCWAG00000010304) #13	BARD1 (ENSCWAG00000008027) #14	ABCA12 (ENSCWAG00000007483) #15	ATIC (ENSCWAG00000007355) #16	FN1 (ENSCWAG00000006968) #17	MREG (ENSCWAG00000006855) #19	PECR (ENSCWAG00000006784) #20	TMEM169 (ENSCWAG00000006756) #21	XRCC5 (ENSCWAG00000006688) #22	MARCHF4 (ENSCWAG00000006660) #23	SMARCAL1 (ENSCWAG00000006586) #25	RPL37A (ENSCWAG00000006536) ##26	IGFBP2 (ENSCWAG00000006499) #27	IGFBP5 (ENSCWAG00000006483) #28	TNP1 (ENSCWAG00000006457) #29	TNS1 (ENSCWAG00000005123) #30	RUFY4 (ENSCWAG00000005010) #31	ENSCWAG00000004999 ##33	ARPC2 (ENSCWAG00000004957) #34	GPBAR1 (ENSCWAG00000004950) #35	AAMP (ENSCWAG00000004853) #36	TMBIM1 (ENSCWAG00000004808)	PNKD (ENSCWAG00000004749) #37	CATIP (ENSCWAG00000004673)
Pig	MODERN SPECIES	6	CPS1 (ENSSSCG00000016159) #7	ERBB4 (ENSSSCG00000016160) #8	ENSSSCG00000037703 #9	IKZF2 (ENSSSCG00000016164) #10	SPAG16 (ENSSSCG00000016166) #11	ENSSSCG00000049911	VWC2L (ENSSSCG00000016168) #13	ENSSSCG00000048197	BARD1 (ENSSSCG00000016170) #14	ABCA12 (ENSSSCG00000034282) #15	ATIC (ENSSSCG00000016173) #16	FN1 (ENSSSCG00000016174) #17	MREG (ENSSSCG00000016175) #19	PECR (ENSSSCG00000022758) #20	TMEM169 (ENSSSCG00000057002) #21	XRCC5 (ENSSSCG00000016177) #22	MARCHF4 (ENSSSCG00000016176) #23	SMARCAL1 (ENSSSCG00000035501) #25	RPL37A (ENSSSCG00000036716) ##26	IGFBP2 (ENSSSCG00000035392) #27	IGFBP5 (ENSSSCG00000025924) #28	TNP1 (ENSSSCG00000016179) #29	TNS1 (ENSSSCG00000027669) #30	RUFY4 (ENSSSCG00000016182) #31	ENSSSCG00000016184 ##33	ENSSSCG00000016183 ##33	ARPC2 (ENSSSCG00000016185) #34	GPBAR1 (ENSSSCG00000022483) #35	AAMP (ENSSSCG00000016189) #36	ENSSSCG00000060885	ENSSSCG00000016186
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Camelidae	ANCESTRAL SPECIES	2													ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Arabian camel	MODERN SPECIES	31	STK17B (ENSCDRG00005013318)	DNAH7 (ENSCDRG00005013375)	SLC39A10 (ENSCDRG00005013576)	TMEFF2 (ENSCDRG00005013673)	CAVIN2 (ENSCDRG00005013850)	NABP1 (ENSCDRG00005013870)	MYO1B (ENSCDRG00005013965)	STAT4 (ENSCDRG00005014639)	STAT1 (ENSCDRG00005014842)	GLS (ENSCDRG00005015244)	NAB1 (ENSCDRG00005015602)	NEMP2 (ENSCDRG00005015658)	MREG (ENSCDRG00005015754) #19	PECR (ENSCDRG00005015798) #20	TMEM169 (ENSCDRG00005015859) #21	XRCC5 (ENSCDRG00005015906) #22	MARCHF4 (ENSCDRG00005016092) #23	SMARCAL1 (ENSCDRG00005016158) #25	RPL37A (ENSCDRG00005016271) ##26	IGFBP2 (ENSCDRG00005016370) #27	IGFBP5 (ENSCDRG00005016426) #28	TNP1 (ENSCDRG00005016467) #29	TNS1 (ENSCDRG00005016604) #30	RUFY4 (ENSCDRG00005017241) #31	ENSCDRG00005017303 ##33	ARPC2 (ENSCDRG00005017385) #34	GPBAR1 (ENSCDRG00005017425) #35	AAMP (ENSCDRG00005017449) #36	PNKD (ENSCDRG00005017602) #37	TMBIM1 (ENSCDRG00005017738)	CATIP (ENSCDRG00005017776)
Alpaca	MODERN SPECIES	44														MREG (ENSVPAG00000002522) #19	PECR (ENSVPAG00000002524) #20	XRCC5 (ENSVPAG00000002526) #22	SMARCAL1 (ENSVPAG00000002528) #25	RPL37A (ENSVPAG00000002529) ##26
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Pecora	ANCESTRAL SPECIES	16	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.m ##33	ENSGT01050000244848.A.a.h.n ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.m ##33	ENSGT01050000244848.A.a.h.n ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.m ##33	ENSGT01050000244848.A.a.h.n ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.n.b ##33	ENSGT01050000244848.A.a.h.n.a ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Bos	ANCESTRAL SPECIES	6	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.n.b ##33	ENSGT01050000244848.A.a.h.n.a ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Bos_b	ANCESTRAL SPECIES	20	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT01050000247862	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.n.b ##33	ENSGT01050000244848.A.a.h.n.a ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Cow	MODERN SPECIES	11	ERBB4 (ENSBTAG00000012647) #8	ENSBTAG00000005239	ENSBTAG00000053477 #8	IKZF2 (ENSBTAG00000037804) #10	ENSBTAG00000018549 #11	ENSBTAG00000052399 #11	VWC2L (ENSBTAG00000053460) #13	BARD1 (ENSBTAG00000033690) #14	ENSBTAG00000051517	ABCA12 (ENSBTAG00000003472) #15	ATIC (ENSBTAG00000019274) #16	FN1 (ENSBTAG00000008300) #17	MREG (ENSBTAG00000013215) #19	TMEM169 (ENSBTAG00000010413) #21	PECR (ENSBTAG00000006821) #20	XRCC5 (ENSBTAG00000010426) #22	MARCHF4 (ENSBTAG00000049897) #23	SMARCAL1 (ENSBTAG00000003843) #25	RPL37A (ENSBTAG00000051254) ##26	IGFBP2 (ENSBTAG00000005596) #27	IGFBP5 (ENSBTAG00000054218) #28	TNP1 (ENSBTAG00000019003) #29	TNS1 (ENSBTAG00000002485) #30	RUFY4 (ENSBTAG00000003327) #31	CXCR2 (ENSBTAG00000038042) ##33	CXCR1 (ENSBTAG00000026753) ##33	ARPC2 (ENSBTAG00000010386) #34	GPBAR1 (ENSBTAG00000003923) #35	AAMP (ENSBTAG00000003927) #36	PNKD (ENSBTAG00000051631)	TMBIM1 (ENSBTAG00000003935)
Hybrid Bos Indicus	MODERN SPECIES	11	ERBB4 (ENSBIXG00005026738) #8	ENSBIXG00005007409	ENSBIXG00005026433	ENSBIXG00005026408	ENSBIXG00005026391	IKZF2 (ENSBIXG00005004492) #10	SPAG16 (ENSBIXG00005004460) #11	VWC2L (ENSBIXG00005004449) #13	ENSBIXG00005005782 #14	ABCA12 (ENSBIXG00005025713) #15	ATIC (ENSBIXG00005025675) #16	FN1 (ENSBIXG00005025569) #17	ENSBIXG00005004282	PECR (ENSBIXG00005025092) #20	TMEM169 (ENSBIXG00005024972) #21	XRCC5 (ENSBIXG00005024910) #22	MARCHF4 (ENSBIXG00005024854) #23	SMARCAL1 (ENSBIXG00005024785) #25	RPL37A (ENSBIXG00005024599) ##26	ENSBIXG00005024536	IGFBP2 (ENSBIXG00005004188) #27	IGFBP5 (ENSBIXG00005004180) #28	TNP1 (ENSBIXG00005024456) #29	ENSBIXG00005024424	TNS1 (ENSBIXG00005007182) #30	RUFY4 (ENSBIXG00005004085) #31	ENSBIXG00005023802 ##33	ENSBIXG00005005883 ##33	ARPC2 (ENSBIXG00005023758) #34	GPBAR1 (ENSBIXG00005023695) #35	AAMP (ENSBIXG00005004055) #36
Bos_a	ANCESTRAL SPECIES	4	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.n.b ##33	ENSGT01050000244848.A.a.h.n.a ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Domestic yak	MODERN SPECIES	11	ACADL (ENSBGRG00000004885)	MYL1 (ENSBGRG00000004749)	LANCL1 (ENSBGRG00000004687)	CPS1 (ENSBGRG00000004265) #7	ERBB4 (ENSBGRG00000003801) #8	ENSBGRG00000003764	IKZF2 (ENSBGRG00000003601) #10	SPAG16 (ENSBGRG00000003519) #11	VWC2L (ENSBGRG00000003498) #13	BARD1 (ENSBGRG00000003261) #14	ABCA12 (ENSBGRG00000003073) #15	ATIC (ENSBGRG00000002957) #16	FN1 (ENSBGRG00000002811) #17	PECR (ENSBGRG00000002736) #20	TMEM169 (ENSBGRG00000002710) #21	XRCC5 (ENSBGRG00000002486) #22	MARCHF4 (ENSBGRG00000002448) #23	SMARCAL1 (ENSBGRG00000002323) #25	RPL37A (ENSBGRG00000002272) ##26	IGFBP2 (ENSBGRG00000002242) #27	IGFBP5 (ENSBGRG00000002228) #28	ENSBGRG00000002217	TNP1 (ENSBGRG00000002189) #29	ENSBGRG00000002184	TNS1 (ENSBGRG00000001914) #30	RUFY4 (ENSBGRG00000001855) #31	ENSBGRG00000001832 ##33	ENSBGRG00000001827 ##33	ARPC2 (ENSBGRG00000001784) #34	GPBAR1 (ENSBGRG00000001769) #35	AAMP (ENSBGRG00000001746) #36
Wild yak	MODERN SPECIES	789												MREG (ENSBMUG00000016207) #19	ENSBMUG00000016186	PECR (ENSBMUG00000016167) #20	TMEM169 (ENSBMUG00000016151) #21	XRCC5 (ENSBMUG00000016131) #22	MARCHF4 (ENSBMUG00000016102) #23
American bison	MODERN SPECIES	3330	MYL1 (ENSBBBG00000010407)	LANCL1 (ENSBBBG00000010389)	CPS1 (ENSBBBG00000010353) #7	ERBB4 (ENSBBBG00000010300) #8	IKZF2 (ENSBBBG00000000044) #10	SPAG16 (ENSBBBG00000000106) #11	VWC2L (ENSBBBG00000000125) #13	BARD1 (ENSBBBG00000010253) #14	ENSBBBG00000010218	ABCA12 (ENSBBBG00000010212) #15	ATIC (ENSBBBG00000010156) #16	FN1 (ENSBBBG00000010079) #17	MREG (ENSBBBG00000001636) #19	PECR (ENSBBBG00000008537) #20	TMEM169 (ENSBBBG00000009808) #21	XRCC5 (ENSBBBG00000009803) #22	MARCHF4 (ENSBBBG00000009795) #23	SMARCAL1 (ENSBBBG00000009787) #25	RPL37A (ENSBBBG00000009773) ##26	IGFBP2 (ENSBBBG00000009764) #27	ENSBBBG00000001612 #28	TNP1 (ENSBBBG00000001609) #29	TNS1 (ENSBBBG00000009746) #30	RUFY4 (ENSBBBG00000009683) #31	ENSBBBG00000001578 ##33	ENSBBBG00000009678 ##33	ARPC2 (ENSBBBG00000009675) #34	GPBAR1 (ENSBBBG00000009664) #35	AAMP (ENSBBBG00000007245) #36	PNKD (ENSBBBG00000009649) #37	TMBIM1 (ENSBBBG00000001560)
Caprinae	ANCESTRAL SPECIES	5	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT01010000228811	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532.k.a #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000167978	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.m ##33	ENSGT01050000244848.A.a.h.n ##33	ENSGT00390000016794.b.p.a #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Rambouillet Sheep	MODERN SPECIES	11	LANCL1 (ENSOARG00020021560)	CPS1 (ENSOARG00020021614) #7	ENSOARG00020022058	ENSOARG00020022071	ENSOARG00020022121	ERBB4 (ENSOARG00020022203) #8	IKZF2 (ENSOARG00020023289) #10	SPAG16 (ENSOARG00020023425) #11	VWC2L (ENSOARG00020023565) #13	ENSOARG00020023630 #14	ABCA12 (ENSOARG00020024186) #15	ATIC (ENSOARG00020024672) #16	FN1 (ENSOARG00020024839) #17	MREG (ENSOARG00020025322) #19	PECR (ENSOARG00020025327) #20	XRCC5 (ENSOARG00020025342) #22	MARCHF4 (ENSOARG00020025369) #23	SMARCAL1 (ENSOARG00020025380) #25	IGFBP2 (ENSOARG00020025420) #27	RPL37A (ENSOARG00020025429) ##26	IGFBP5 (ENSOARG00020025439) #28	TNP1 (ENSOARG00020025444) #29	TNS1 (ENSOARG00020025486) #30	RUFY4 (ENSOARG00020025590) #31	ENSOARG00020025597 ##33	ENSOARG00020025600 ##33	ENSOARG00020025604 #34	AAMP (ENSOARG00020006548) #36	PNKD (ENSOARG00020006707) #37	TMBIM1 (ENSOARG00020006961)	CATIP (ENSOARG00020007041)
Goat	MODERN SPECIES	11	LANCL1 (ENSCHIG00000015499)	CPS1 (ENSCHIG00000025029) #7	ENSCHIG00000015255	ENSCHIG00000025711 #8	IKZF2 (ENSCHIG00000008623) #10	ENSCHIG00000025009 #11	ENSCHIG00000024996 #11	VWC2L (ENSCHIG00000023299) #13	ENSCHIG00000021676 #14	ABCA12 (ENSCHIG00000019371) #15	ATIC (ENSCHIG00000018659) #16	FN1 (ENSCHIG00000021438) #17	MREG (ENSCHIG00000024433) #19	PECR (ENSCHIG00000025963) #20	TMEM169 (ENSCHIG00000023199) #21	XRCC5 (ENSCHIG00000022047) #22	MARCHF4 (ENSCHIG00000025938) #23	SMARCAL1 (ENSCHIG00000025342) #25	ENSCHIG00000009863	IGFBP2 (ENSCHIG00000025360) #27	IGFBP5 (ENSCHIG00000011607) #28	TNP1 (ENSCHIG00000024932) #29	TNS1 (ENSCHIG00000014628) #30	ENSCHIG00000024380 #31	ENSCHIG00000020838 ##33	ENSCHIG00000012101 ##33	ENSCHIG00000002910	ENSCHIG00000007721 #34	GPBAR1 (ENSCHIG00000025833) #35	AAMP (ENSCHIG00000024008) #36	TMBIM1 (ENSCHIG00000025349)
Siberian musk deer	MODERN SPECIES	352	LANCL1 (ENSMMSG00000020057)	CPS1 (ENSMMSG00000020103) #7	ENSMMSG00000020623	ERBB4 (ENSMMSG00000020665) #8	ENSMMSG00000021126	IKZF2 (ENSMMSG00000021166) #10	SPAG16 (ENSMMSG00000021415) #11	VWC2L (ENSMMSG00000021613) #13	BARD1 (ENSMMSG00000021660) #14	ABCA12 (ENSMMSG00000021923) #15	ATIC (ENSMMSG00000022097) #16	FN1 (ENSMMSG00000022388) #17	ENSMMSG00000024206	PECR (ENSMMSG00000024210) #20	TMEM169 (ENSMMSG00000024214) #21	XRCC5 (ENSMMSG00000015657) #22	MARCHF4 (ENSMMSG00000015684) #23	SMARCAL1 (ENSMMSG00000015705) #25	RPL37A (ENSMMSG00000015781) ##26	IGFBP2 (ENSMMSG00000015853) #27	IGFBP5 (ENSMMSG00000015864) #28	TNP1 (ENSMMSG00000015890) #29	TNS1 (ENSMMSG00000015987) #30	RUFY4 (ENSMMSG00000016588) #31	ENSMMSG00000016647 ##33	ENSMMSG00000016662 ##33	ENSMMSG00000016686	ARPC2 (ENSMMSG00000016731) #34	GPBAR1 (ENSMMSG00000016766) #35	AAMP (ENSMMSG00000016789) #36	PNKD (ENSMMSG00000016919) #37
Yarkand deer	MODERN SPECIES	31	ENSCHYG00000004063	ENSCHYG00000004056	ERBB4 (ENSCHYG00000003952) #8	IKZF2 (ENSCHYG00000003879) #10	ENSCHYG00000003836	SPAG16 (ENSCHYG00000003817) #11	VWC2L (ENSCHYG00000003794) #13	ENSCHYG00000003753 #14	ABCA12 (ENSCHYG00000003601) #15	ENSCHYG00000003569	ATIC (ENSCHYG00000003528) #16	FN1 (ENSCHYG00000003158) #17	MREG (ENSCHYG00000003092) #19	PECR (ENSCHYG00000003070) #20	TMEM169 (ENSCHYG00000003059) #21	XRCC5 (ENSCHYG00000003017) #22	MARCHF4 (ENSCHYG00000003004) #23	SMARCAL1 (ENSCHYG00000002948) #25	RPL37A (ENSCHYG00000002919) ##26	IGFBP2 (ENSCHYG00000002895) #27	IGFBP5 (ENSCHYG00000002877) #28	TNP1 (ENSCHYG00000002856) #29	ENSCHYG00000002849	ENSCHYG00000002840	TNS1 (ENSCHYG00000002447) #30	RUFY4 (ENSCHYG00000002304) #31	ENSCHYG00000002290 ##33	ENSCHYG00000002280 ##33	ENSCHYG00000002201 #34	GPBAR1 (ENSCHYG00000002188) #35	AAMP (ENSCHYG00000002144) #36
Cetacea	ANCESTRAL SPECIES	14	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00530000065303.j	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Odontoceti	ANCESTRAL SPECIES	13	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00530000065303.j	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00390000016794.a.a ##34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a	ENSGT00940000160799
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00530000065303.j	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.i ##33	ENSGT01050000244848.A.a.h.j ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00530000065303.j	ENSGT00940000154695 #8	ENSGT00390000002231.d.b #9	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.i ##33	ENSGT01050000244848.A.a.h.j ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00530000065303.j	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h.i ##33	ENSGT01050000244848.A.a.h.j ##33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Narwhal	MODERN SPECIES	302	ENSMMNG00015008099	MYL1 (ENSMMNG00015008068)	LANCL1 (ENSMMNG00015008039)	CPS1 (ENSMMNG00015007884) #7	ENSMMNG00015007841	ERBB4 (ENSMMNG00015007770) #8	IKZF2 (ENSMMNG00015007711) #10	SPAG16 (ENSMMNG00015007641) #11	VWC2L (ENSMMNG00015007616) #13	BARD1 (ENSMMNG00015007443) #14	ABCA12 (ENSMMNG00015007237) #15	ATIC (ENSMMNG00015007140) #16	FN1 (ENSMMNG00015007016) #17	MREG (ENSMMNG00015006946) #19	TMEM169 (ENSMMNG00015006931) #21	XRCC5 (ENSMMNG00015006904) #22	MARCHF4 (ENSMMNG00015006890) #23	SMARCAL1 (ENSMMNG00015006849) #25	RPL37A (ENSMMNG00015006797) ##26	IGFBP2 (ENSMMNG00015006761) #27	IGFBP5 (ENSMMNG00015006747) #28	TNP1 (ENSMMNG00015006732) #29	TNS1 (ENSMMNG00015006588) #30	RUFY4 (ENSMMNG00015006488) #31	ENSMMNG00015006453 ##33	ENSMMNG00015006445 ##33	ARPC2 (ENSMMNG00015006416) #34	GPBAR1 (ENSMMNG00015006403) #35	AAMP (ENSMMNG00015006366) #36	TMBIM1 (ENSMMNG00015006338)	PNKD (ENSMMNG00015006301) #37
Beluga whale	MODERN SPECIES	84	KANSL1L (ENSDLEG00000010779)	ACADL (ENSDLEG00000010802)	ENSDLEG00000010817	LANCL1 (ENSDLEG00000010841)	CPS1 (ENSDLEG00000010899) #7	ENSDLEG00000011044	ERBB4 (ENSDLEG00000011065) #8	IKZF2 (ENSDLEG00000011195) #10	VWC2L (ENSDLEG00000011244) #13	BARD1 (ENSDLEG00000011262) #14	ABCA12 (ENSDLEG00000011292) #15	ATIC (ENSDLEG00000011357) #16	FN1 (ENSDLEG00000011437) #17	MREG (ENSDLEG00000011537) #19	TMEM169 (ENSDLEG00000011562) #21	XRCC5 (ENSDLEG00000011573) #22	MARCHF4 (ENSDLEG00000011629) #23	SMARCAL1 (ENSDLEG00000011642) #25	RPL37A (ENSDLEG00000011670) #26	IGFBP2 (ENSDLEG00000011681) #27	IGFBP5 (ENSDLEG00000011691) #28	TNP1 (ENSDLEG00000011700) #29	TNS1 (ENSDLEG00000011725) #30	RUFY4 (ENSDLEG00000011866) #31	CXCR2 (ENSDLEG00000011899) ##33	ENSDLEG00000011912 ##33	ARPC2 (ENSDLEG00000011925) #34	GPBAR1 (ENSDLEG00000011941) #35	AAMP (ENSDLEG00000011948) #36	PNKD (ENSDLEG00000011967) #37	TMBIM1 (ENSDLEG00000011997)
Vaquita	MODERN SPECIES	18	LANCL1 (ENSPSNG00000019514)	CPS1 (ENSPSNG00000018881) #7	ENSPSNG00000018762	ERBB4 (ENSPSNG00000018144) #8	ENSPSNG00000017988 #9	IKZF2 (ENSPSNG00000017845) #10	SPAG16 (ENSPSNG00000017700) #11	ENSPSNG00000017666	VWC2L (ENSPSNG00000017630) #13	BARD1 (ENSPSNG00000017308) #14	ABCA12 (ENSPSNG00000016762) #15	ATIC (ENSPSNG00000016623) #16	FN1 (ENSPSNG00000016255) #17	MREG (ENSPSNG00000015961) #19	TMEM169 (ENSPSNG00000015908) #21	XRCC5 (ENSPSNG00000015841) #22	MARCHF4 (ENSPSNG00000015751) #23	SMARCAL1 (ENSPSNG00000015537) #25	RPL37A (ENSPSNG00000015410) ##26	IGFBP2 (ENSPSNG00000015351) #27	IGFBP5 (ENSPSNG00000015299) #28	TNP1 (ENSPSNG00000015249) #29	TNS1 (ENSPSNG00000014473) #30	RUFY4 (ENSPSNG00000014217) #31	ENSPSNG00000014184 ##33	ENSPSNG00000014161 ##33	ARPC2 (ENSPSNG00000014103) #34	GPBAR1 (ENSPSNG00000014071) #35	AAMP (ENSPSNG00000013763) #36	TMBIM1 (ENSPSNG00000013684)	PNKD (ENSPSNG00000013524) #37
Dolphin	MODERN SPECIES	3545															ENSTTRG00000008991 #20	XRCC5 (ENSTTRG00000008995) #22	MARCHF4 (ENSTTRG00000009000) #23	SMARCAL1 (ENSTTRG00000009001) #25	ENSTTRG00000009002 ##26	IGFBP2 (ENSTTRG00000009003) #27	IGFBP5 (ENSTTRG00000009004) #28
Sperm whale	MODERN SPECIES	11	LANCL1 (ENSPCTG00005007711)	CPS1 (ENSPCTG00005007806) #7	ENSPCTG00005008116	ERBB4 (ENSPCTG00005008147) #8	ENSPCTG00005008634	IKZF2 (ENSPCTG00005008691) #10	SPAG16 (ENSPCTG00005009033) #11	VWC2L (ENSPCTG00005009115) #13	BARD1 (ENSPCTG00005009198) #14	ABCA12 (ENSPCTG00005009725) #15	ATIC (ENSPCTG00005010239) #16	FN1 (ENSPCTG00005010889) #17	MREG (ENSPCTG00005017221) #19	PECR (ENSPCTG00005017315) #20	TMEM169 (ENSPCTG00005017414) #21	XRCC5 (ENSPCTG00005017451) #22	MARCH4 (ENSPCTG00005017507) #23	RPL37A (ENSPCTG00005017558) ##26	TNP1 (ENSPCTG00005017658) #29	ENSPCTG00005017699 ##33	ENSPCTG00005017711 ##33	ENSPCTG00005017764 #34	PNKD (ENSPCTG00005017792) #37	VIL1 (ENSPCTG00005017833)	USP37 (ENSPCTG00005017971)	CNOT9 (ENSPCTG00005018215)	PLCD4 (ENSPCTG00005018288)	ZNF142 (ENSPCTG00005018649)	BCS1L (ENSPCTG00005018671)	RNF25 (ENSPCTG00005018698)	STK36 (ENSPCTG00005018735)
Blue whale	MODERN SPECIES	18	CPS1 (ENSBMSG00010002893) #7	ENSBMSG00010002996	ERBB4 (ENSBMSG00010003029) #8	ENSBMSG00010003157 #9	IKZF2 (ENSBMSG00010003187) #10	SPAG16 (ENSBMSG00010003224) #11	ENSBMSG00010003241	ENSBMSG00010003250	VWC2L (ENSBMSG00010003263) #13	BARD1 (ENSBMSG00010003318) #14	ABCA12 (ENSBMSG00010003607) #15	ATIC (ENSBMSG00010003763) #16	FN1 (ENSBMSG00010003854) #17	MREG (ENSBMSG00010003983) #19	TMEM169 (ENSBMSG00010003988) #21	XRCC5 (ENSBMSG00010003999) #22	MARCHF4 (ENSBMSG00010004007) #23	SMARCAL1 (ENSBMSG00010004020) #25	ENSBMSG00010004033	RPL37A (ENSBMSG00010004043) ##26	IGFBP2 (ENSBMSG00010004055) #27	IGFBP5 (ENSBMSG00010004065) #28	TNP1 (ENSBMSG00010004074) #29	TNS1 (ENSBMSG00010004143) #30	RUFY4 (ENSBMSG00010004294) #31	ENSBMSG00010004305 ##33	ENSBMSG00010004313 ##33	ARPC2 (ENSBMSG00010004320) #34	GPBAR1 (ENSBMSG00010004340) #35	AAMP (ENSBMSG00010004353) #36	PNKD (ENSBMSG00010004445) #37
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37
Afrotheria	ANCESTRAL SPECIES	1	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Tenrec	MODERN SPECIES	8123																XRCC5 (ENSETEG00000020029) #22
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.b #26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.h ##33	ENSGT01050000244848.A.a.g.b #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a
Elephant	MODERN SPECIES	301	LANCL1 (ENSLAFG00000018697)	CPS1 (ENSLAFG00000005505) #7	ENSLAFG00000006617 #8	ENSLAFG00000030559 #8	ENSLAFG00000032609 #8	IKZF2 (ENSLAFG00000008236) #10	ENSLAFG00000010985 #11	VWC2L (ENSLAFG00000010991) #13	BARD1 (ENSLAFG00000000546) #14	ABCA12 (ENSLAFG00000005158) #15	ATIC (ENSLAFG00000002520) #16	FN1 (ENSLAFG00000016024) #17	MREG (ENSLAFG00000018636) #19	PECR (ENSLAFG00000001417) #20	TMEM169 (ENSLAFG00000010543) #21	XRCC5 (ENSLAFG00000010544) #22	MARCHF4 (ENSLAFG00000010549) #23	SMARCAL1 (ENSLAFG00000006842) #25	ENSLAFG00000006849 #26	IGFBP2 (ENSLAFG00000028294) #27	IGFBP5 (ENSLAFG00000027482) #28	ENSLAFG00000030968	TNP1 (ENSLAFG00000032172) #29	TNS1 (ENSLAFG00000000579) #30	ENSLAFG00000030116 #31	ENSLAFG00000026970 ##33	CXCR1 (ENSLAFG00000027224) #33	ARPC2 (ENSLAFG00000007414) #34	GPBAR1 (ENSLAFG00000031029) #35	AAMP (ENSLAFG00000007420) #36	TMBIM1 (ENSLAFG00000007432)
Hyrax	MODERN SPECIES	4601															TMEM169 (ENSPCAG00000000825) #21	XRCC5 (ENSPCAG00000000868) #22
Xenarthra	ANCESTRAL SPECIES	1647																ENSGT00940000153239.A #22	ENSGT00940000158179 #23
Armadillo	MODERN SPECIES	3887																ENSDNOG00000017606 #22	MARCHF4 (ENSDNOG00000034398) #23
Sloth	MODERN SPECIES	7943																XRCC5 (ENSCHOG00000003798) #22
Marsupialia	ANCESTRAL SPECIES	8	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Marsupialia_b	ANCESTRAL SPECIES	7	ENSGT00940000157652	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Diprotodontia	ANCESTRAL SPECIES	31	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.b #20	ENSGT00390000015276 #21	ENSGT00940000156882.a #20	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT01050000244890.a.b.a	ENSGT00940000154101.a
Diprotodontia_a	ANCESTRAL SPECIES	30	ENSGT01030000234570.d.a	ENSGT00530000063186.b.b	ENSGT00940000157192 #7	ENSGT00940000154695 #8	ENSGT00940000157137 #10	ENSGT00940000155053 #11	ENSGT00720000108792.B #13	ENSGT00940000156532 #14	ENSGT00940000157295 #15	ENSGT00390000004553 #16	ENSGT00940000155126 #17	ENSGT00390000008926 #19	ENSGT00940000156882.b #20	ENSGT00390000015276 #21	ENSGT00940000156882.a #20	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00390000000539 #29	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a.k #33	ENSGT01050000244848.A.a.l #33	ENSGT00390000016794.b #34	ENSGT00390000010256 #35	ENSGT00940000153648.a #36	ENSGT00940000158887 #37	ENSGT00530000065055
Common wonbat	MODERN SPECIES	1038	LANCL1 (ENSVURG00010003810)	CPS1 (ENSVURG00010003725) #7	ERBB4 (ENSVURG00010003549) #8	IKZF2 (ENSVURG00010003422) #10	ENSVURG00010003388	ENSVURG00010003372 #11	VWC2L (ENSVURG00010003348) #13	BARD1 (ENSVURG00010003327) #14	ABCA12 (ENSVURG00010003222) #15	ATIC (ENSVURG00010003185) #16	FN1 (ENSVURG00010003070) #17	MREG (ENSVURG00010003034) #19	ENSVURG00010003025 #20	TMEM169 (ENSVURG00010003001) #21	ENSVURG00010002961 #20	XRCC5 (ENSVURG00010002898) #22	MARCHF4 (ENSVURG00010002862) #23	SMARCAL1 (ENSVURG00010002845) #25	RPL37A (ENSVURG00010002818) ##26	IGFBP2 (ENSVURG00010002805) #27	IGFBP5 (ENSVURG00010002789) #28	ENSVURG00010002759	ENSVURG00010002744	TNS1 (ENSVURG00010002639) #30	ENSVURG00010002568 #31	ENSVURG00010002562 #33	ENSVURG00010002559 #33	ARPC2 (ENSVURG00010002543) #34	GPBAR1 (ENSVURG00010002537) #35	AAMP (ENSVURG00010002518) #36	TMBIM1 (ENSVURG00010002468)
koala	MODERN SPECIES	98							VWC2L (ENSPCIG00000022591) #13	BARD1 (ENSPCIG00000022589) #14	ABCA12 (ENSPCIG00000008985) #15	ATIC (ENSPCIG00000008126) #16	FN1 (ENSPCIG00000022559) #17	MREG (ENSPCIG00000022546) #19	ENSPCIG00000022540 #20	TMEM169 (ENSPCIG00000035665) #21	ENSPCIG00000008673 #20	XRCC5 (ENSPCIG00000007362) #22	MARCHF4 (ENSPCIG00000022525) #23	SMARCAL1 (ENSPCIG00000022514) #25	RPL37A (ENSPCIG00000016481) ##26	ENSPCIG00000031078 #27	IGFBP5 (ENSPCIG00000029430) #28	TNP1 (ENSPCIG00000029428) #29	TNS1 (ENSPCIG00000021440) #30	ENSPCIG00000021446 #31	ENSPCIG00000032298 #33	ENSPCIG00000034662 #33	ARPC2 (ENSPCIG00000021450) #34	GPBAR1 (ENSPCIG00000021451) #35	AAMP (ENSPCIG00000021452) #36	ENSPCIG00000021454	TMBIM1 (ENSPCIG00000032815)
Wallaby	MODERN SPECIES	320																XRCC5 (ENSMEUG00000004021) #22
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000025581	ERBB4 (ENSSHAG00000014078) #8	IKZF2 (ENSSHAG00000001687) #10	ENSSHAG00000004079 #11	ENSSHAG00000025155 #11	VWC2L (ENSSHAG00000014665) #13	BARD1 (ENSSHAG00000012998) #14	ABCA12 (ENSSHAG00000011632) #15	ENSSHAG00000022770	ATIC (ENSSHAG00000010108) #16	FN1 (ENSSHAG00000009319) #17	MREG (ENSSHAG00000026386) #19	ENSSHAG00000001503 #20	TMEM169 (ENSSHAG00000000555) #21	ENSSHAG00000015328 #20	XRCC5 (ENSSHAG00000014688) #22	MARCHF4 (ENSSHAG00000014010) #23	SMARCAL1 (ENSSHAG00000013538) #25	RPL37A (ENSSHAG00000013417) #26	IGFBP2 (ENSSHAG00000012420) #27	IGFBP5 (ENSSHAG00000028603) #28	TNP1 (ENSSHAG00000023054) #29	ENSSHAG00000022586	TNS1 (ENSSHAG00000017301) #30	ENSSHAG00000016873 #31	ENSSHAG00000030658 #33	ENSSHAG00000025920 #33	ARPC2 (ENSSHAG00000022290) #34	ENSSHAG00000016509 #36	TMBIM1 (ENSSHAG00000029053)	PNKD (ENSSHAG00000023370) #37
Opossum	MODERN SPECIES	6	ENSMODG00000025486 #11	ENSMODG00000015663	ENSMODG00000048388	ENSMODG00000008370	ENSMODG00000042235 #11	VWC2L (ENSMODG00000015633) #13	BARD1 (ENSMODG00000015631) #14	ABCA12 (ENSMODG00000015628) #15	ATIC (ENSMODG00000015612) #16	FN1 (ENSMODG00000015605) #17	ENSMODG00000028517	MREG (ENSMODG00000015571) #19	TMEM169 (ENSMODG00000037001) #21	ENSMODG00000029452	PECR (ENSMODG00000015562) #20	XRCC5 (ENSMODG00000015556) #22	MARCHF4 (ENSMODG00000015546) #23	SMARCAL1 (ENSMODG00000015544) #25	RPL37A (ENSMODG00000039748) ##26	IGFBP2 (ENSMODG00000015540) #27	ENSMODG00000015536 #28	ENSMODG00000038409	TNP1 (ENSMODG00000024866) #29	TNS1 (ENSMODG00000015529) #30	ENSMODG00000015512 #31	ENSMODG00000015510 #33	ENSMODG00000050077	ENSMODG00000046410 #33	ENSMODG00000025420	ENSMODG00000015507 #34	GPBAR1 (ENSMODG00000024870) #35
Platypus	MODERN SPECIES		GLI2 (ENSOANG00000048401)	INHBB (ENSOANG00000042798)	RALB (ENSOANG00000005641)	ENSOANG00000039667	EPB41L5 (ENSOANG00000012068)	PTPN4 (ENSOANG00000012067)	MRAS (ENSOANG00000007543)	CNTNAP5 (ENSOANG00000013116)	ENSOANG00000048973	BIN1 (ENSOANG00000048048)	CYP27C1 (ENSOANG00000047580)	ERCC3 (ENSOANG00000046724)	MAP3K2 (ENSOANG00000041392)	PECR (ENSOANG00000046612) #20	TMEM169 (ENSOANG00000036652) #21	XRCC5 (ENSOANG00000050627) #22	MARCHF4 (ENSOANG00000050114) #23	SMARCAL1 (ENSOANG00000041849) #25	ENSOANG00000012999 ##26	ENSOANG00000036237 #27	IGFBP5 (ENSOANG00000045048) #28	ENSOANG00000038564 #30	ENSOANG00000041597 #30	ENSOANG00000014535 #33	ENSOANG00000014465 #33	ARPC2 (ENSOANG00000044586) #34	AAMP (ENSOANG00000036228) #36	ENSOANG00000002705	TMBIM1 (ENSOANG00000038099)	PNKD (ENSOANG00000048930) #37	ENSOANG00000041238
Sauria	ANCESTRAL SPECIES		ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00390000016988.a.a.a.a.a.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000161535	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000153339	ENSGT00940000166665
Episquamata	ANCESTRAL SPECIES		ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000163961.b	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055
Toxicofera	ANCESTRAL SPECIES	10	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT00950000186252	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000163961.b	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36
Elapidae	ANCESTRAL SPECIES		ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353.e.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a.c.b #33	ENSGT00950000186252	ENSGT01050000244848.A.a.d #33	ENSGT01050000244848.A.a.c.a #33	ENSGT00390000016794.b #34	ENSGT00940000163961.b	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT00940000159213.e	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353.e.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a.c.b #33	ENSGT01050000244848.A.a.c.a #33	ENSGT00390000016794.b #34	ENSGT00940000163961.b	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a.k #36	ENSGT01050000244890.a.b.a.d	ENSGT01050000244890.a.b.a.c
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT00940000159213.e	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353.e.b	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a.c.a #33	ENSGT00390000016794.b #34	ENSGT00940000163961.b	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a.k #36	ENSGT01010000229930	ENSGT01050000244890.a.b.a.d	ENSGT01050000244890.a.b.a.c
Eastern brown snake	MODERN SPECIES	37	GLI2 (ENSPTXG00000006923)	INHBB (ENSPTXG00000006925)	RALB (ENSPTXG00000006926)	EPB41L5 (ENSPTXG00000006927)	PTPN4 (ENSPTXG00000006928)	TMEM177 (ENSPTXG00000006931)	ENSPTXG00000006932	CNTNAP5 (ENSPTXG00000006933)	GYPC (ENSPTXG00000006934)	BIN1 (ENSPTXG00000006935)	CYP27C1 (ENSPTXG00000006936)	ERCC3 (ENSPTXG00000006937)	MAP3K2 (ENSPTXG00000006938)	PECR (ENSPTXG00000006939) #20	TMEM169 (ENSPTXG00000006940) #21	XRCC5 (ENSPTXG00000006941) #22	MARCHF4 (ENSPTXG00000006942) #23	SMARCAL1 (ENSPTXG00000006943) #25	ENSPTXG00000006944 ##26	IGFBP2 (ENSPTXG00000006945) #27	IGFBP5 (ENSPTXG00000006946) #28	ENSPTXG00000006947	TNS1 (ENSPTXG00000006948) #30	ENSPTXG00000006949 #33	ENSPTXG00000006950 #33	ARPC2 (ENSPTXG00000006951) #34	ENSPTXG00000006952	ENSPTXG00000006953	ENSPTXG00000006954	ENSPTXG00000006955 #36	PNKD (ENSPTXG00000006978) #37
Mainland tiger snake	MODERN SPECIES	12	RALB (ENSNSUG00000010946)	EPB41L5 (ENSNSUG00000010949)	PTPN4 (ENSNSUG00000010960)	TMEM177 (ENSNSUG00000011181)	ENSNSUG00000011191	CNTNAP5 (ENSNSUG00000011204)	ENSNSUG00000011207	GYPC (ENSNSUG00000011208)	BIN1 (ENSNSUG00000011210)	ENSNSUG00000011214	ERCC3 (ENSNSUG00000011265)	ENSNSUG00000011441	ENSNSUG00000011442	PECR (ENSNSUG00000011444) #20	TMEM169 (ENSNSUG00000011446) #21	XRCC5 (ENSNSUG00000011451) #22	MARCHF4 (ENSNSUG00000012059) #23	SMARCAL1 (ENSNSUG00000012060) #25	ENSNSUG00000012063 ##26	IGFBP2 (ENSNSUG00000012065) #27	IGFBP5 (ENSNSUG00000012066) #28	ENSNSUG00000012068	ENSNSUG00000012069 #30	ENSNSUG00000012070 #30	ENSNSUG00000012072 #33	ARPC2 (ENSNSUG00000012073) #34	ENSNSUG00000012074	ENSNSUG00000012075	AAMP (ENSNSUG00000012076) #36	ENSNSUG00000012077	ENSNSUG00000012078
Blue-lipped sea krait	MODERN SPECIES	7922															TMEM169 (ENSLLTG00000004128) #21	XRCC5 (ENSLLTG00000004095) #22
Indian cobra	MODERN SPECIES		RALB (ENSNNAG00000013300)	ENSNNAG00000013318	EPB41L5 (ENSNNAG00000013339)	PTPN4 (ENSNNAG00000013440)	TMEM177 (ENSNNAG00000013635)	ENSNNAG00000013655	CNTNAP5 (ENSNNAG00000013713)	GYPC (ENSNNAG00000014061)	BIN1 (ENSNNAG00000014088)	CYP27C1 (ENSNNAG00000014199)	ERCC3 (ENSNNAG00000014222)	MAP3K2 (ENSNNAG00000014330)	ENSNNAG00000014345	PECR (ENSNNAG00000014353) #20	TMEM169 (ENSNNAG00000014361) #21	XRCC5 (ENSNNAG00000014382) #22	MARCHF4 (ENSNNAG00000014432) #23	SMARCAL1 (ENSNNAG00000014498) #25	ENSNNAG00000014517 ##26	IGFBP2 (ENSNNAG00000014535) #27	ENSNNAG00000014542 #28	IGFBP5 (ENSNNAG00000014564) #28	ENSNNAG00000014580	TNS1 (ENSNNAG00000014625) #30	ENSNNAG00000014876	ENSNNAG00000014886 #33	ENSNNAG00000014894 #33	ARPC2 (ENSNNAG00000014906) #34	ENSNNAG00000014932	ENSNNAG00000014960	ENSNNAG00000014976
Lizard	MODERN SPECIES	958								GYPC (ENSACAG00000023178)	BIN1 (ENSACAG00000010082)	CYP27C1 (ENSACAG00000010044)	ERCC3 (ENSACAG00000009919)	ENSACAG00000029135	MAP3K2 (ENSACAG00000009826)	PECR (ENSACAG00000036880) #20	TMEM169 (ENSACAG00000009776) #21	XRCC5 (ENSACAG00000009597) #22	MARCHF4 (ENSACAG00000009579) #23
Laterata	ANCESTRAL SPECIES	2	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890.k.b #28	ENSGT00940000155400.B #30	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.d	ENSGT01050000244890.a.b.a.c
Common wall lizard	MODERN SPECIES		ENSPMRG00000019859	ENSPMRG00000019855	MRAS (ENSPMRG00000019847)	ENSPMRG00000019842	CNTNAP5 (ENSPMRG00000019834)	ENSPMRG00000019827	GYPC (ENSPMRG00000019819)	ENSPMRG00000019808	BIN1 (ENSPMRG00000019780)	ENSPMRG00000019774	ENSPMRG00000019768	ERCC3 (ENSPMRG00000019742)	MAP3K2 (ENSPMRG00000019729)	PECR (ENSPMRG00000019717) #20	TMEM169 (ENSPMRG00000019712) #21	XRCC5 (ENSPMRG00000019696) #22	MARCHF4 (ENSPMRG00000019683) #23	SMARCAL1 (ENSPMRG00000019665) #25	ENSPMRG00000019657 ##26	IGFBP2 (ENSPMRG00000019640) #27	TNS1 (ENSPMRG00000019506) #30	ENSPMRG00000019464	ENSPMRG00000019459 #33	ENSPMRG00000019455 #33	ARPC2 (ENSPMRG00000019440) #34	ENSPMRG00000019427	ENSPMRG00000019412	AAMP (ENSPMRG00000019397) #36	ENSPMRG00000019383	ENSPMRG00000019370	ENSPMRG00000019360
Argentine black and white tegu	MODERN SPECIES	27	EPB41L5 (ENSSMRG00000011835)	PTPN4 (ENSSMRG00000011827)	ENSSMRG00000011826	TMEM177 (ENSSMRG00000011825)	MRAS (ENSSMRG00000011824)	CNTNAP5 (ENSSMRG00000011805)	GYPC (ENSSMRG00000011766)	ENSSMRG00000011739	ENSSMRG00000011737	BIN1 (ENSSMRG00000011721)	CYP27C1 (ENSSMRG00000011720)	ERCC3 (ENSSMRG00000011718)	MAP3K2 (ENSSMRG00000011717)	PECR (ENSSMRG00000011716) #20	TMEM169 (ENSSMRG00000011715) #21	XRCC5 (ENSSMRG00000011714) #22	ENSSMRG00000011713	MARCHF4 (ENSSMRG00000011712) #23	SMARCAL1 (ENSSMRG00000011664) #25	ENSSMRG00000011629 ##26	IGFBP2 (ENSSMRG00000011627) #27	IGFBP5 (ENSSMRG00000011625) #28	TNS1 (ENSSMRG00000011563) #30	ENSSMRG00000011480	ENSSMRG00000011449 #33	ARPC2 (ENSSMRG00000011448) #34	ENSSMRG00000011447	ENSSMRG00000011446	ENSSMRG00000011445	AAMP (ENSSMRG00000011444) #36	ENSSMRG00000011442
tuatara	MODERN SPECIES	1432										BIN1 (ENSSPUG00000015043)	CYP27C1 (ENSSPUG00000015097)	ERCC3 (ENSSPUG00000015183)	MAP3K2 (ENSSPUG00000015202)	PECR (ENSSPUG00000015218) #20	TMEM169 (ENSSPUG00000015222) #21	XRCC5 (ENSSPUG00000015248) #22	MARCHF4 (ENSSPUG00000015355) #23	SMARCAL1 (ENSSPUG00000015369) #25	ENSSPUG00000015385 ##26	IGFBP2 (ENSSPUG00000015393) #27	IGFBP5 (ENSSPUG00000015404) #28
Archelosauria	ANCESTRAL SPECIES	8	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00940000154044.a.b #31	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055
Archosauria	ANCESTRAL SPECIES	6	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Aves	ANCESTRAL SPECIES	8	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Neognathae	ANCESTRAL SPECIES	6	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Passeriformes	ANCESTRAL SPECIES	6	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Great tit	MODERN SPECIES	27	ENSPMJG00000019783	INHBB (ENSPMJG00000019782)	RALB (ENSPMJG00000019781)	EPB41L5 (ENSPMJG00000019780)	PTPN4 (ENSPMJG00000019779)	TMEM177 (ENSPMJG00000019778)	MRAS (ENSPMJG00000019777)	CNTNAP5 (ENSPMJG00000019774)	GYPC (ENSPMJG00000019773)	BIN1 (ENSPMJG00000019772)	CYP27C1 (ENSPMJG00000019771)	ERCC3 (ENSPMJG00000019770)	MAP3K2 (ENSPMJG00000019769)	PECR (ENSPMJG00000019768) #20	TMEM169 (ENSPMJG00000019767) #21	XRCC5 (ENSPMJG00000019766) #22	MARCHF4 (ENSPMJG00000019765) #23	ENSPMJG00000019764	SMARCAL1 (ENSPMJG00000019763) #25	ENSPMJG00000019762 ##26	IGFBP2 (ENSPMJG00000019761) #27	IGFBP5 (ENSPMJG00000019760) #28	ENSPMJG00000019757	ENSPMJG00000019756	TNS1 (ENSPMJG00000019755) #30	RUFY4 (ENSPMJG00000019754) #31	ARPC2 (ENSPMJG00000019753) #34	ENSPMJG00000019752 #33	ENSPMJG00000019751	TMBIM1 (ENSPMJG00000019750)	PNKD (ENSPMJG00000019749) #37
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160228	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Medium ground finch	MODERN SPECIES	1	RALB (ENSGFOG00000012626)	EPB41L5 (ENSGFOG00000012629)	ENSGFOG00000012632	ENSGFOG00000012637	TMEM177 (ENSGFOG00000012639)	MRAS (ENSGFOG00000012641)	ENSGFOG00000012643	CNTNAP5 (ENSGFOG00000012647)	GYPC (ENSGFOG00000000199)	BIN1 (ENSGFOG00000000224)	CYP27C1 (ENSGFOG00000000263)	ERCC3 (ENSGFOG00000000278)	MAP3K2 (ENSGFOG00000000291)	PECR (ENSGFOG00000000302) #20	TMEM169 (ENSGFOG00000000314) #21	XRCC5 (ENSGFOG00000000320) #22	MARCHF4 (ENSGFOG00000000345) #23	SMARCAL1 (ENSGFOG00000000364) #25	ENSGFOG00000000384 ##26	IGFBP2 (ENSGFOG00000000391) #27	IGFBP5 (ENSGFOG00000000404) #28	TNS1 (ENSGFOG00000000444) #30	ENSGFOG00000000542 #31	ENSGFOG00000000549 #33	ARPC2 (ENSGFOG00000000561) #34	AAMP (ENSGFOG00000000584) #36	ENSGFOG00000000596	TMBIM1 (ENSGFOG00000000605)	PNKD (ENSGFOG00000000614) #37	CATIP (ENSGFOG00000000620)	SLC11A1 (ENSGFOG00000000632)
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Zebra finch	MODERN SPECIES	29	ENSTGUG00000004599	INHBB (ENSTGUG00000018814)	RALB (ENSTGUG00000029222)	EPB41L5 (ENSTGUG00000004633)	PTPN4 (ENSTGUG00000004689)	TMEM177 (ENSTGUG00000004726)	MRAS (ENSTGUG00000004727)	CNTNAP5 (ENSTGUG00000004748)	GYPC (ENSTGUG00000019495)	BIN1 (ENSTGUG00000004882)	CYP27C1 (ENSTGUG00000004904)	ERCC3 (ENSTGUG00000004920)	MAP3K2 (ENSTGUG00000004975)	PECR (ENSTGUG00000024314) #20	TMEM169 (ENSTGUG00000026916) #21	XRCC5 (ENSTGUG00000005014) #22	MARCHF4 (ENSTGUG00000005073) #23	ENSTGUG00000021333	SMARCAL1 (ENSTGUG00000005079) #25	ENSTGUG00000005107 ##26	IGFBP2 (ENSTGUG00000020693) #27	IGFBP5 (ENSTGUG00000025564) #28	TNS1 (ENSTGUG00000005126) #30	RUFY4 (ENSTGUG00000005168) #31	ENSTGUG00000023091 #33	ARPC2 (ENSTGUG00000005170) #34	AAMP (ENSTGUG00000005212) #36	ENSTGUG00000005122	TMBIM1 (ENSTGUG00000005261)	PNKD (ENSTGUG00000005290) #37	SLC11A1 (ENSTGUG00000005297)
Common canary	MODERN SPECIES	8	RALB (ENSSCAG00000012158)	ENSSCAG00000012164	EPB41L5 (ENSSCAG00000012183)	PTPN4 (ENSSCAG00000012204)	TMEM177 (ENSSCAG00000012229)	MRAS (ENSSCAG00000012240)	CNTNAP5 (ENSSCAG00000012280)	GYPC (ENSSCAG00000012425)	BIN1 (ENSSCAG00000012432)	CYP27C1 (ENSSCAG00000012448)	ERCC3 (ENSSCAG00000012453)	ENSSCAG00000012460	MAP3K2 (ENSSCAG00000012489)	PECR (ENSSCAG00000012493) #20	TMEM169 (ENSSCAG00000012497) #21	XRCC5 (ENSSCAG00000012499) #22	MARCHF4 (ENSSCAG00000012501) #23	SMARCAL1 (ENSSCAG00000012512) #25	ENSSCAG00000012520 ##26	IGFBP2 (ENSSCAG00000012525) #27	ENSSCAG00000012528 #28	ENSSCAG00000012569 #30	ENSSCAG00000012691 #30	RUFY4 (ENSSCAG00000012856) #31	ENSSCAG00000012859 #33	ARPC2 (ENSSCAG00000012860) #34	AAMP (ENSSCAG00000012865) #36	ENSSCAG00000012871	TMBIM1 (ENSSCAG00000012874)	PNKD (ENSSCAG00000012879) #37	CATIP (ENSSCAG00000012930)
Flycatcher	MODERN SPECIES	26	INHBB (ENSFALG00000025610)	RALB (ENSFALG00000027363)	ENSFALG00000024980	EPB41L5 (ENSFALG00000013207)	PTPN4 (ENSFALG00000013202)	TMEM177 (ENSFALG00000014091)	ENSFALG00000013196	CNTNAP5 (ENSFALG00000013187)	GYPC (ENSFALG00000003921)	BIN1 (ENSFALG00000003924)	CYP27C1 (ENSFALG00000003928)	ERCC3 (ENSFALG00000003936)	MAP3K2 (ENSFALG00000003953)	PECR (ENSFALG00000003963) #20	TMEM169 (ENSFALG00000003970) #21	XRCC5 (ENSFALG00000003972) #22	MARCHF4 (ENSFALG00000025698) #23	SMARCAL1 (ENSFALG00000003981) #25	ENSFALG00000003982 ##26	IGFBP2 (ENSFALG00000027525) #27	IGFBP5 (ENSFALG00000024773) #28	TNS1 (ENSFALG00000003985) #30	ENSFALG00000003992 #31	ENSFALG00000028906 #33	ARPC2 (ENSFALG00000003999) #34	AAMP (ENSFALG00000004015) #36	ENSFALG00000026825	TMBIM1 (ENSFALG00000026407)	PNKD (ENSFALG00000004028) #37	CATIP (ENSFALG00000004038)	SLC11A1 (ENSFALG00000004041)
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00940000155984	ENSGT00940000165735	ENSGT00960000190080	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a
Kakapo	MODERN SPECIES	22	INHBB (ENSSHBG00005016773)	RALB (ENSSHBG00005016778)	ENSSHBG00005016797	EPB41L5 (ENSSHBG00005016820)	PTPN4 (ENSSHBG00005016891)	TMEM177 (ENSSHBG00005016906)	MRAS (ENSSHBG00005016912)	CNTNAP5 (ENSSHBG00005017253)	GYPC (ENSSHBG00005019857)	BIN1 (ENSSHBG00005019859)	CYP27C1 (ENSSHBG00005019864)	ERCC3 (ENSSHBG00005019867)	MAP3K2 (ENSSHBG00005019872)	PECR (ENSSHBG00005019878) #20	TMEM169 (ENSSHBG00005019882) #21	XRCC5 (ENSSHBG00005019916) #22	MARCHF4 (ENSSHBG00005000514) #23	SMARCAL1 (ENSSHBG00005000548) #25	ENSSHBG00005000554 ##26	IGFBP2 (ENSSHBG00005000560) #27	IGFBP5 (ENSSHBG00005000565) #28	TNS1 (ENSSHBG00005000575) #30	ENSSHBG00005000580 #31	ENSSHBG00005000582	ENSSHBG00005000584 #33	ARPC2 (ENSSHBG00005000585) #34	AAMP (ENSSHBG00005011826) #36	ENSSHBG00005011860	TMBIM1 (ENSSHBG00005011879)	PNKD (ENSSHBG00005011916) #37	ENSSHBG00005011938
Golden eagle	MODERN SPECIES	22	ENSACCG00020003006	ENSACCG00020002992	EPB41L5 (ENSACCG00020002970)	PTPN4 (ENSACCG00020002938)	TMEM177 (ENSACCG00020002916)	MRAS (ENSACCG00020002908)	CNTNAP5 (ENSACCG00020002884)	ENSACCG00020002857	GYPC (ENSACCG00020002841)	BIN1 (ENSACCG00020002785)	CYP27C1 (ENSACCG00020002710)	ERCC3 (ENSACCG00020002597)	MAP3K2 (ENSACCG00020002572)	PECR (ENSACCG00020002552) #20	TMEM169 (ENSACCG00020002513) #21	XRCC5 (ENSACCG00020002485) #22	MARCHF4 (ENSACCG00020002452) #23	SMARCAL1 (ENSACCG00020002369) #25	ENSACCG00020002207 ##26	IGFBP2 (ENSACCG00020002195) #27	IGFBP5 (ENSACCG00020002186) #28	ENSACCG00020002174	TNS1 (ENSACCG00020002099) #30	ENSACCG00020002007 #31	ENSACCG00020001994 #33	ARPC2 (ENSACCG00020001977) #34	AAMP (ENSACCG00020001953) #36	ENSACCG00020001941	TMBIM1 (ENSACCG00020001923)	PNKD (ENSACCG00020001881) #37	CATIP (ENSACCG00020001823)
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Anatidae	ANCESTRAL SPECIES	10	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00390000016794.b #34	ENSGT01050000244848.A.a #33	ENSGT00940000153648.a #36
Pink-footed goose	MODERN SPECIES	151									GYPC (ENSABRG00000012374)	BIN1 (ENSABRG00000012408)	CYP27C1 (ENSABRG00000012451)	ERCC3 (ENSABRG00000012460)	MAP3K2 (ENSABRG00000012482)	PECR (ENSABRG00000012555) #20	TMEM169 (ENSABRG00000012563) #21	XRCC5 (ENSABRG00000012571) #22	MARCHF4 (ENSABRG00000012585) #23	SMARCAL1 (ENSABRG00000012586) #25	ENSABRG00000012592 ##26	IGFBP2 (ENSABRG00000012597) #27	IGFBP5 (ENSABRG00000012598) #28	TNS1 (ENSABRG00000012633) #30	ARPC2 (ENSABRG00000012684) #34	ENSABRG00000012691 #33	AAMP (ENSABRG00000012705) #36
Duck	MODERN SPECIES	25	ZEB2 (ENSAPLG00000007687)	GTDC1 (ENSAPLG00000007900)	ARHGAP15 (ENSAPLG00000008021)	KYNU (ENSAPLG00000008142)	LRP1B (ENSAPLG00000023161)	ENSAPLG00000018223	ENSAPLG00000025771	ENSAPLG00000008881	ENSAPLG00000027181	NXPH2 (ENSAPLG00000001877)	SPOPL (ENSAPLG00000008966)	HNMT (ENSAPLG00000022720)	MAP3K2 (ENSAPLG00000012930)	PECR (ENSAPLG00000012862) #20	TMEM169 (ENSAPLG00000012858) #21	XRCC5 (ENSAPLG00000012767) #22	MARCHF4 (ENSAPLG00000020548) #23	SMARCAL1 (ENSAPLG00000009864) #25	ENSAPLG00000009836 ##26	ENSAPLG00000017994 #27	ENSAPLG00000009817 #27	TNS1 (ENSAPLG00000025012) #30	ARPC2 (ENSAPLG00000004251) #34	CNOT9 (ENSAPLG00000005817)	PLCD4 (ENSAPLG00000025810)	ZNF142 (ENSAPLG00000026417)	BCS1L (ENSAPLG00000005237)	RNF25 (ENSAPLG00000005028)	ENSAPLG00000020988	PRKAG3 (ENSAPLG00000025550)	CYP27A1 (ENSAPLG00000004381)
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000165735	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37	ENSGT00940000154101.a	ENSGT00940000160799
Chicken	MODERN SPECIES	36	INHBB (ENSGALG00010018937)	RALB (ENSGALG00010018919)	ENSGALG00010018874	EPB41L5 (ENSGALG00010018858)	PTPN4 (ENSGALG00010018829)	TMEM177 (ENSGALG00010018764)	MRAS (ENSGALG00010018670)	CNTNAP5 (ENSGALG00010021708)	GYPC (ENSGALG00010021698)	BIN1 (ENSGALG00010021684)	CYP27C1 (ENSGALG00010021299)	ERCC3 (ENSGALG00010021290)	MAP3K2 (ENSGALG00010021275)	TMEM169 (ENSGALG00010021253) #21	PECR (ENSGALG00010021246) #20	XRCC5 (ENSGALG00010021235) #22	MARCH4 (ENSGALG00010018366) #23	SMARCAL1 (ENSGALG00010019294) #25	RPL37A (ENSGALG00010019288) ##26	IGFBP2 (ENSGALG00010019282) #27	IGFBP5 (ENSGALG00010019277) #28	TNS1 (ENSGALG00010019050) #30	RUFY4 (ENSGALG00010019265) #31	ENSGALG00010019254	CXCR1 (ENSGALG00010019250) #33	ARPC2 (ENSGALG00010019233) #34	AAMP (ENSGALG00010019223) #36	ENSGALG00010019194	PNKD (ENSGALG00010019184) #37	CATIP (ENSGALG00010019164)	SLC11A1 (ENSGALG00010021140)
Turkey	MODERN SPECIES	27	ENSMGAG00000011483	ENSMGAG00000011495	SLC11A1 (ENSMGAG00000011500)	PNKD (ENSMGAG00000011524) #37	TMBIM1 (ENSMGAG00000011539)	ENSMGAG00000011572 #34	ENSMGAG00000011555 #36	ENSMGAG00000015922 #33	ENSMGAG00000011581 #31	ENSMGAG00000011587 #30	ENSMGAG00000021023 #28	ENSMGAG00000011630 #27	ENSMGAG00000011655 ##26	SMARCAL1 (ENSMGAG00000011658) #25	ENSMGAG00000011684 #21	ENSMGAG00000011667 #22	ENSMGAG00000011685 #20	ENSMGAG00000011696	ENSMGAG00000011706	ENSMGAG00000011716	ENSMGAG00000011730	ENSMGAG00000018245	ENSMGAG00000017873	ENSMGAG00000018628	HOXD4 (ENSMGAG00000015896)	ENSMGAG00000018655	ENSMGAG00000016851	MTX2 (ENSMGAG00000009647)	HNRNPA3 (ENSMGAG00000009565)	NFE2L2 (ENSMGAG00000009534)	AGPS (ENSMGAG00000009510)
Japanese quail	MODERN SPECIES	25	ENSCJPG00005012936	INHBB (ENSCJPG00005012938)	RALB (ENSCJPG00005012939)	EPB41L5 (ENSCJPG00005012940)	PTPN4 (ENSCJPG00005012941)	TMEM177 (ENSCJPG00005013042)	MRAS (ENSCJPG00005013043)	CNTNAP5 (ENSCJPG00005013048)	GYPC (ENSCJPG00005013052)	BIN1 (ENSCJPG00005013056)	CYP27C1 (ENSCJPG00005013059)	ERCC3 (ENSCJPG00005013060)	MAP3K2 (ENSCJPG00005013061)	PECR (ENSCJPG00005013065) #20	TMEM169 (ENSCJPG00005013066) #21	XRCC5 (ENSCJPG00005013067) #22	MARCHF4 (ENSCJPG00005013068) #23	SMARCAL1 (ENSCJPG00005013069) #25	IGFBP2 (ENSCJPG00005013070) #27	IGFBP5 (ENSCJPG00005013071) #28	TNS1 (ENSCJPG00005013082) #30	RUFY4 (ENSCJPG00005013083) #31	ENSCJPG00005013084	ENSCJPG00005013085 #33	ARPC2 (ENSCJPG00005013086) #34	AAMP (ENSCJPG00005013087) #36	TMBIM1 (ENSCJPG00005013088)	PNKD (ENSCJPG00005013089) #37	CATIP (ENSCJPG00005013090)	SLC11A1 (ENSCJPG00005013091)	CTDSP1 (ENSCJPG00005013092)
African ostrich	MODERN SPECIES	368	ENSSCUG00000004908	RALB (ENSSCUG00000004905)	ENSSCUG00000004901	EPB41L5 (ENSSCUG00000004897)	PTPN4 (ENSSCUG00000004894)	TMEM177 (ENSSCUG00000004891)	MRAS (ENSSCUG00000004889)	CNTNAP5 (ENSSCUG00000004881)	GYPC (ENSSCUG00000004875)	BIN1 (ENSSCUG00000004871)	CYP27C1 (ENSSCUG00000004868)	ERCC3 (ENSSCUG00000004858)	MAP3K2 (ENSSCUG00000004855)	PECR (ENSSCUG00000004853) #20	TMEM169 (ENSSCUG00000004852) #21	XRCC5 (ENSSCUG00000004849) #22	MARCHF4 (ENSSCUG00000004844) #23
Australian saltwater crocodile	MODERN SPECIES	66	ENSCPRG00005000965	TMEM177 (ENSCPRG00005000964)	ENSCPRG00005000960	ENSCPRG00005000934	MRAS (ENSCPRG00005000931)	CNTNAP5 (ENSCPRG00005000884)	GYPC (ENSCPRG00005000782)	BIN1 (ENSCPRG00005000710)	ENSCPRG00005000674	ENSCPRG00005000654	CYP27C1 (ENSCPRG00005000633)	ENSCPRG00005000426	MAP3K2 (ENSCPRG00005000338)	PECR (ENSCPRG00005000280) #20	TMEM169 (ENSCPRG00005000277) #21	XRCC5 (ENSCPRG00005000270) #22	MARCHF4 (ENSCPRG00005000224) #23	SMARCAL1 (ENSCPRG00005000158) #25	ENSCPRG00005018977 ##26	IGFBP2 (ENSCPRG00005018976) #27	IGFBP5 (ENSCPRG00005018975) #28	TNS1 (ENSCPRG00005018944) #30	ENSCPRG00005018924 #33	ARPC2 (ENSCPRG00005018922) ##34	AAMP (ENSCPRG00005018921) #36	ENSCPRG00005018920	TMBIM1 (ENSCPRG00005018919)	PNKD (ENSCPRG00005018918) #37	SLC11A1 (ENSCPRG00005018916)	VIL1 (ENSCPRG00005018914)	USP37 (ENSCPRG00005018913)
Cryptodira	ANCESTRAL SPECIES	5	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT00940000154044.a.b #31	ENSGT00950000186252	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B.w #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.e
Testudinidae	ANCESTRAL SPECIES	8	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00940000164607	ENSGT00940000163551.c.a	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B.w #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.e
Goode s thornscrub tortoise	MODERN SPECIES	2	ENSGEVG00005015168	INHBB (ENSGEVG00005015187)	RALB (ENSGEVG00005015239)	EPB41L5 (ENSGEVG00005015314)	PTPN4 (ENSGEVG00005015469)	TMEM177 (ENSGEVG00005015541)	MRAS (ENSGEVG00005015556)	CNTNAP5 (ENSGEVG00005015580)	GYPC (ENSGEVG00005015675)	BIN1 (ENSGEVG00005015838)	CYP27C1 (ENSGEVG00005016909)	ERCC3 (ENSGEVG00005017030)	MAP3K2 (ENSGEVG00005017075)	PECR (ENSGEVG00005017104) #20	TMEM169 (ENSGEVG00005017124) #21	XRCC5 (ENSGEVG00005017139) #22	MARCHF4 (ENSGEVG00005017175) #23	SMARCAL1 (ENSGEVG00005017218) #25	ENSGEVG00005017288 ##26	IGFBP2 (ENSGEVG00005017314) #27	IGFBP5 (ENSGEVG00005017341) #28	ENSGEVG00005017383 #30	ENSGEVG00005017528 #30	ENSGEVG00005017576	ENSGEVG00005017615 #31	ENSGEVG00005017649 #33	ENSGEVG00005017657	ARPC2 (ENSGEVG00005017680) #34	ENSGEVG00005017713	ENSGEVG00005017764	AAMP (ENSGEVG00005017816) #36
Abingdon island giant tortoise	MODERN SPECIES	2469														PECR (ENSCABG00000007335) #20	TMEM169 (ENSCABG00000007337) #21	XRCC5 (ENSCABG00000007401) #22	MARCHF4 (ENSCABG00000009330) #23	SMARCAL1 (ENSCABG00000009335) #25	ENSCABG00000009339 ##26	IGFBP2 (ENSCABG00000009341) #27	IGFBP5 (ENSCABG00000009343) #28	TNS1 (ENSCABG00000009348) #30	ENSCABG00000009358	ENSCABG00000009360 #31	ENSCABG00000009362 #33	ARPC2 (ENSCABG00000009366) #34	ENSCABG00000009370	ENSCABG00000009377	AAMP (ENSCABG00000009381) #36	ENSCABG00000009385	ENSCABG00000009391
Emydidae	ANCESTRAL SPECIES	4	ENSGT00940000159213	ENSGT00940000159862	ENSGT00940000155984	ENSGT00940000156332	ENSGT00940000157211	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00390000016988.a.a.a.b.b ##26	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B.w #30	ENSGT00940000154044.a.b #31	ENSGT01050000244848.A.a #33	ENSGT00390000016794.b #34	ENSGT00950000182969.A	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a.e
Three-toed box turtle	MODERN SPECIES	25	INHBB (ENSTMTG00000000820)	RALB (ENSTMTG00000000810)	EPB41L5 (ENSTMTG00000000784)	PTPN4 (ENSTMTG00000000757)	ENSTMTG00000000747	TMEM177 (ENSTMTG00000000740)	MRAS (ENSTMTG00000000734)	CNTNAP5 (ENSTMTG00000000702)	GYPC (ENSTMTG00000000690)	BIN1 (ENSTMTG00000000628)	CYP27C1 (ENSTMTG00000000553)	ERCC3 (ENSTMTG00000000506)	MAP3K2 (ENSTMTG00000000471)	PECR (ENSTMTG00000000451) #20	TMEM169 (ENSTMTG00000000441) #21	XRCC5 (ENSTMTG00000000396) #22	MARCHF4 (ENSTMTG00000000364) #23	SMARCAL1 (ENSTMTG00000000320) #25	ENSTMTG00000000302 ##26	IGFBP2 (ENSTMTG00000000287) #27	IGFBP5 (ENSTMTG00000000269) #28	ENSTMTG00000000215 #30	ENSTMTG00000000182	ENSTMTG00000000165 #33	ARPC2 (ENSTMTG00000000132) #34	ENSTMTG00000000089	ENSTMTG00000000061	AAMP (ENSTMTG00000002611) #36	PNKD (ENSTMTG00000002598) #37	CATIP (ENSTMTG00000002574)	SLC11A1 (ENSTMTG00000002565)
painted turtle	MODERN SPECIES	697	TFCP2L1 (ENSCPBG00000013730)	GLI2 (ENSCPBG00000013726)	RALB (ENSCPBG00000013718)	EPB41L5 (ENSCPBG00000013701)	PTPN4 (ENSCPBG00000013687)	TMEM177 (ENSCPBG00000013684)	MRAS (ENSCPBG00000013681)	CNTNAP5 (ENSCPBG00000013674)	GYPC (ENSCPBG00000013670)	BIN1 (ENSCPBG00000013655)	CYP27C1 (ENSCPBG00000013644)	ERCC3 (ENSCPBG00000013638)	MAP3K2 (ENSCPBG00000013632)	PECR (ENSCPBG00000013628) #20	TMEM169 (ENSCPBG00000013623) #21	XRCC5 (ENSCPBG00000013615) #22	MARCHF4 (ENSCPBG00000013609) #23	SMARCAL1 (ENSCPBG00000013599) #25	ENSCPBG00000013594	ENSCPBG00000013591 ##26	ENSCPBG00000013588 #27	IGFBP5 (ENSCPBG00000013587) #28	ENSCPBG00000013348 #30	ENSCPBG00000013300 #30	ENSCPBG00000013294 #31	ENSCPBG00000013291 #33	ARPC2 (ENSCPBG00000013289) #34	ENSCPBG00000013287	ENSCPBG00000013286	ENSCPBG00000013285	AAMP (ENSCPBG00000013283) #36
Chinese turtle	MODERN SPECIES	1193							CNTNAP5 (ENSPSIG00000016762)	ENSPSIG00000001654	GYPC (ENSPSIG00000016754)	BIN1 (ENSPSIG00000016041)	CYP27C1 (ENSPSIG00000015521)	ERCC3 (ENSPSIG00000014682)	MAP3K2 (ENSPSIG00000014669)	PECR (ENSPSIG00000014617) #20	TMEM169 (ENSPSIG00000014491) #21	XRCC5 (ENSPSIG00000013929) #22	MARCHF4 (ENSPSIG00000013908) #23	ENSPSIG00000013899 #25	ENSPSIG00000013882 ##26	ENSPSIG00000013877	IGFBP5 (ENSPSIG00000013629) #28	ENSPSIG00000001646	ENSPSIG00000013412 #30	ENSPSIG00000013317 #30
Anura	ANCESTRAL SPECIES	41	ENSGT00940000157211	ENSGT00940000164607	ENSGT00390000012351	ENSGT00390000017490	ENSGT00940000164423	ENSGT00390000010354	ENSGT00940000156353	ENSGT00940000160532	ENSGT00510000049102	ENSGT00950000182882.A.b.b	ENSGT00950000182905.a.b	ENSGT00390000002204	ENSGT00940000156884	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000158542 #27	ENSGT00940000155890 #28	ENSGT00940000155400.B #30	ENSGT01050000244848.A.a #33	ENSGT00390000016794 #34	ENSGT00940000153336	ENSGT00940000153309	ENSGT00940000166665	ENSGT01030000234555.b	ENSGT00940000153648.a #36	ENSGT00530000065055	ENSGT01050000244890.a.b.a	ENSGT00940000158887 #37
Frog	MODERN SPECIES	9	ccdc14 (ENSXETG00000024172)	kalrn (ENSXETG00000027283)	epb41l5 (ENSXETG00000047404)	ptpn4 (ENSXETG00000024183)	ENSXETG00000046449	ENSXETG00000046528	tmem177 (ENSXETG00000042724)	mras (ENSXETG00000042472)	cntnap5 (ENSXETG00000013056)	gypc (ENSXETG00000044361)	ENSXETG00000042927	ENSXETG00000049050	ercc3 (ENSXETG00000033646)	bin1 (ENSXETG00000046584)	map3k2 (ENSXETG00000000471)	tmem169 (ENSXETG00000032580) #22	pecr (ENSXETG00000000470) #23	smarcal1 (ENSXETG00000000465) #25	ENSXETG00000047629	igfbp2 (ENSXETG00000033133) #27	igfbp5 (ENSXETG00000044058) #28	ENSXETG00000048012	tns1 (ENSXETG00000005595) #30	cxcr2 (ENSXETG00000048756) #33	arpc2 (ENSXETG00000027920) #34	krt18.3 (ENSXETG00000005611)	krt8.2 (ENSXETG00000014441)	gpbar1 (ENSXETG00000044012)	aamp (ENSXETG00000014437) #36	ENSXETG00000042225	chpf (ENSXETG00000041884)
Leishan spiny toad	MODERN SPECIES	10	ENSLLEG00000022142	ENSLLEG00000022176	GYPC (ENSLLEG00000022197)	ENSLLEG00000022225	ENSLLEG00000022257	ENSLLEG00000022293	ENSLLEG00000022380	BIN1 (ENSLLEG00000022493)	CYP27C1 (ENSLLEG00000023872)	ERCC3 (ENSLLEG00000024081)	MAP3K2 (ENSLLEG00000024290)	ENSLLEG00000024597	ENSLLEG00000024642 #20	ENSLLEG00000024851 #20	TMEM169 (ENSLLEG00000025228) #21	XRCC5 (ENSLLEG00000025296) #22	MARCHF4 (ENSLLEG00000025792) #23	SMARCAL1 (ENSLLEG00000025834) #25	ENSLLEG00000026002	IGFBP2 (ENSLLEG00000026042) #27	IGFBP5 (ENSLLEG00000026086) #28	ENSLLEG00000026125	ENSLLEG00000026143	TNS1 (ENSLLEG00000026242) #30	ENSLLEG00000027107 #33	ENSLLEG00000027129	ARPC2 (ENSLLEG00000027189) #34	ENSLLEG00000027455	ENSLLEG00000027498	ENSLLEG00000027550	AAMP (ENSLLEG00000027578) #36
Coelacanth	MODERN SPECIES	1243												MAP3K2 (ENSLACG00000001238)	ENSLACG00000003547	PECR (ENSLACG00000004018) #20	TMEM169 (ENSLACG00000005090) #21	XRCC5 (ENSLACG00000006088) #22	MARCHF4 (ENSLACG00000008445) #23	SMARCAL1 (ENSLACG00000010974) #25	RPL37A (ENSLACG00000011578) #26	ENSLACG00000022142	ATG9A (ENSLACG00000012069)	ENSLACG00000012414	GLB1L (ENSLACG00000012680)
Actinopterygii	ANCESTRAL SPECIES	170														ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000162528	ENSGT00940000154913	ENSGT00950000183009	ENSGT00940000155489.a	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00940000164909	ENSGT00390000004977	ENSGT00950000182895.a.b
Neopterygii	ANCESTRAL SPECIES	61				ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000016988.a.a.a.b ##26	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000162528	ENSGT00940000154913	ENSGT00950000183009	ENSGT00940000155489.a	ENSGT00390000011514	ENSGT00730000110871.a.a.a.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000014839.b
Osteoglossocephalai	ANCESTRAL SPECIES	56	ENSGT01100000263556.a.a.p.a	ENSGT01100000263521.b	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00390000015228	ENSGT00390000018807	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000016988.a.a.a.b ##26	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000158179 #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000162528	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00390000014839.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Clupeocephala	ANCESTRAL SPECIES	3	ENSGT00940000159677.a.b	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000010316	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000016988.a.a.a.a.b ##26	ENSGT00940000156882 #20	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000158179.a #23	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Otomorpha	ANCESTRAL SPECIES	559														ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25
Clupeiformes	ANCESTRAL SPECIES	271													ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00950000182905.a.a.a.a.a.a	ENSGT00390000017724.a.b	ENSGT00940000164632.a	ENSGT00940000153568.B	ENSGT00940000165301.a	ENSGT00390000011515	ENSGT00940000154817.b.a	ENSGT00940000159158	ENSGT00390000013973.A.a.c.a	ENSGT00940000159213.q.a	ENSGT00940000159862.a	ENSGT00940000165735
Atlantic herring	MODERN SPECIES	11	ubr3 (ENSCHAG00000024934)	ENSCHAG00000025642	ENSCHAG00000025644	ENSCHAG00000025647	ENSCHAG00000025648	ENSCHAG00000025649	ENSCHAG00000025651	fastkd1 (ENSCHAG00000025657)	ENSCHAG00000025672	ENSCHAG00000025678	klhl41a (ENSCHAG00000025685)	bbs5 (ENSCHAG00000025692)	MAP3K13 (ENSCHAG00000025697)	PFKL (ENSCHAG00000025736)	TMEM169 (ENSCHAG00000026055) #21	xrcc5 (ENSCHAG00000026084) #22	COL6A2 (ENSCHAG00000026301)	MARCHF4 (ENSCHAG00000026307) #23	SMARCAL1 (ENSCHAG00000026312) #25	nme9 (ENSCHAG00000026379)	ENSCHAG00000026409	zgc:162707 (ENSCHAG00000026414)	cyp27a3 (ENSCHAG00000026417)	eaf2 (ENSCHAG00000026429)	tsn (ENSCHAG00000000137)	ENSCHAG00000000161	nifk (ENSCHAG00000000181)	ENSCHAG00000000202	nifk (ENSCHAG00000000229)	ENSCHAG00000000283	ENSCHAG00000000290
Denticle herring	MODERN SPECIES	19	ENSDCDG00000032026	ENSDCDG00000032029	ENSDCDG00000032030	ENSDCDG00000032033	ENSDCDG00000032035	ENSDCDG00000032038	ENSDCDG00000032042	ENSDCDG00000032045	ENSDCDG00000032047	ENSDCDG00000032048	ENSDCDG00000032052	ENSDCDG00000032077	ENSDCDG00000032080	MAP3K13 (ENSDCDG00000032088)	TMEM169 (ENSDCDG00000032302) #21	xrcc5 (ENSDCDG00000014067) #22	ENSDCDG00000014713	lrp2a (ENSDCDG00000014887)	rdh1 (ENSDCDG00000018967)	dhrs9 (ENSDCDG00000018972)	spc25 (ENSDCDG00000018987)	nostrin (ENSDCDG00000018993)	CERS6 (ENSDCDG00000019019)	STK39 (ENSDCDG00000019446)	B3GALT1 (ENSDCDG00000020628)	ENSDCDG00000020632	ENSDCDG00000020633	CSRNP3 (ENSDCDG00000020634)	GALNT3 (ENSDCDG00000020637)	ttc21b (ENSDCDG00000020659)	scn1laa (ENSDCDG00000020763)
Otophysi	ANCESTRAL SPECIES	330						ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000016988.a.a.a.a.b ##26	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000158179.b #23	ENSGT00940000157608 #25
Characiphysae	ANCESTRAL SPECIES	53	ENSGT00940000157440.m.a	ENSGT00940000155324	ENSGT00940000159765	ENSGT00990000205434	ENSGT00940000158542.b #27	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #30	ENSGT00940000160626.b.e	ENSGT00940000164965	ENSGT00940000160626.b.f	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000154574.d	ENSGT01060000248762	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a	ENSGT00940000158212.B	ENSGT00940000156702.a.a.b	ENSGT01040000240451.a.a.c	ENSGT00940000177166	ENSGT00940000163812	ENSGT00940000163418.A.b	ENSGT00390000011295.a.k
Channel catfish	MODERN SPECIES	25	LCT (ENSIPUG00000008064)	gjc1 (ENSIPUG00000008046)	ENSIPUG00000008025	ENSIPUG00000008011	slc4a3 (ENSIPUG00000007948)	igfbp2b (ENSIPUG00000007932) #27	Igfbp5 (ENSIPUG00000007915) #28	ENSIPUG00000007894	ENSIPUG00000007879	ENSIPUG00000007476	TNS1 (ENSIPUG00000007092) #30	trpm2 (ENSIPUG00000006994)	Map3k13 (ENSIPUG00000006876)	Pfkl (ENSIPUG00000006656)	tmem169 (ENSIPUG00000006621) #21	xrcc5 (ENSIPUG00000006528) #22	MARCHF4 (ENSIPUG00000006517) #23	smarcal1 (ENSIPUG00000006476) #25	nme9 (ENSIPUG00000006429)	ENSIPUG00000006405	dal1b (ENSIPUG00000006383)	ENSIPUG00000006357	FAM171B (ENSIPUG00000006308)	lrrc3 (ENSIPUG00000006296)	pcbp3 (ENSIPUG00000006238)	ENSIPUG00000006216	col18a1a (ENSIPUG00000006142)	ENSIPUG00000006043	ctdsp1 (ENSIPUG00000005990)	SPEGNB (ENSIPUG00000005973)	ENSIPUG00000005963
Characiphysae_b	ANCESTRAL SPECIES	119	ENSGT00940000165503	ENSGT00940000166532	ENSGT00940000157440.m.a	ENSGT00940000155324	ENSGT00940000159765	ENSGT00990000205434	ENSGT00940000158542.b #27	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #30	ENSGT00940000160626.b.e	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000158179.b #23	ENSGT00940000157608 #25
Characoidei	ANCESTRAL SPECIES	43	ENSGT00940000153969.b	ENSGT00940000165503	ENSGT00940000166532	ENSGT00940000157440.m.a	ENSGT00940000155324	ENSGT00940000159765	ENSGT00990000205434	ENSGT00940000158542.b #27	ENSGT00940000155890.a.a #28	ENSGT00940000155400.B #30	ENSGT00940000160626.b.e	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000154574.d	ENSGT01060000248762	ENSGT00950000183184.a.a.a	ENSGT00940000154360.A.b.a	ENSGT00940000162768.B.a	ENSGT00940000156702.a.a.b	ENSGT01040000240451.a.a.c	ENSGT00940000177166	ENSGT00940000163812	ENSGT00940000163418.A.b	ENSGT00390000011295.a.k	ENSGT00950000183038.a.b.b.b.q
Red-bellied piranha	MODERN SPECIES	19	twist2 (ENSPNAG00000013851)	hdac4 (ENSPNAG00000013918)	LCT (ENSPNAG00000013965)	gjc4b (ENSPNAG00000013983)	slc4a3 (ENSPNAG00000014116)	ENSPNAG00000003033	igfbp2b (ENSPNAG00000014168) #27	igfbp5b (ENSPNAG00000014198) #28	ENSPNAG00000014214	ENSPNAG00000014283	TNS1 (ENSPNAG00000014447) #30	trpm2 (ENSPNAG00000014493)	MAP3K13 (ENSPNAG00000014567)	PFKL (ENSPNAG00000003197)	TMEM169 (ENSPNAG00000014643) #21	xrcc5 (ENSPNAG00000014874) #22	MARCHF4 (ENSPNAG00000014886) #23	SMARCAL1 (ENSPNAG00000014900) #25	nme9 (ENSPNAG00000014972)	ENSPNAG00000014988	ENSPNAG00000014996	ENSPNAG00000015007	ENSPNAG00000015023	lrrc3 (ENSPNAG00000015032)	pcbp3 (ENSPNAG00000015104)	col18a1a (ENSPNAG00000015167)	ENSPNAG00000015299	ENSPNAG00000005458	ENSPNAG00000015332	SPEGNB (ENSPNAG00000015352)	ENSPNAG00000015388
Mexicana tetra	MODERN SPECIES	10	gjc4b (ENSAMXG00000034738)	slc4a3 (ENSAMXG00000018140)	ENSAMXG00000034265	igfbp2b (ENSAMXG00000034029) #27	igfbp5b (ENSAMXG00000039094) #28	ENSAMXG00000029459	TNS1 (ENSAMXG00000018095) #30	ENSAMXG00000003102	ENSAMXG00000003162	ENSAMXG00000040917	ENSAMXG00000031049	MAP3K13 (ENSAMXG00000036910)	PFKL (ENSAMXG00000003245)	ENSAMXG00000040717	TMEM169 (ENSAMXG00000030420) #21	xrcc5 (ENSAMXG00000003290) #22	ENSAMXG00000035289	SMARCAL1 (ENSAMXG00000003350) #25	nme9 (ENSAMXG00000003365)	dap1b (ENSAMXG00000038801)	ENSAMXG00000036438	FAM171B (ENSAMXG00000003418)	lrrc3 (ENSAMXG00000025533)	pcbp3 (ENSAMXG00000003440)	col18a1a (ENSAMXG00000003496)	ENSAMXG00000003542	CTDSP1 (ENSAMXG00000003560)	ENSAMXG00000036704	SPEGNB (ENSAMXG00000003568)	ENSAMXG00000003587	HYCC2 (ENSAMXG00000003628)
Electric eel	MODERN SPECIES	160	ENSEEEG00000019337	ENSEEEG00000019338	ehmt1a (ENSEEEG00000019369)	ARRDC1 (ENSEEEG00000020119)	ENSEEEG00000020123	nelfb (ENSEEEG00000020125)	entpd2a.1 (ENSEEEG00000020135)	grin1b (ENSEEEG00000020142)	ENSEEEG00000020194	ENSEEEG00000020202	ENSEEEG00000020317	trpm2 (ENSEEEG00000020460)	MAP3K13 (ENSEEEG00000020470)	PFKL (ENSEEEG00000020490)	TMEM169 (ENSEEEG00000020790) #21	xrcc5 (ENSEEEG00000020811) #22	MARCHF4 (ENSEEEG00000020907) #23	SMARCAL1 (ENSEEEG00000020918) #25	nme9 (ENSEEEG00000021056)	dap1b (ENSEEEG00000021057)	hnmt (ENSEEEG00000021060)	ENSEEEG00000021061	ENSEEEG00000021062
Cyprinoidei	ANCESTRAL SPECIES	214											ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292.u.a	ENSGT00740000117080	ENSGT00390000015276.g #21	ENSGT00940000153239.A #22	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000177866
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	257								ENSGT01090000259985.b.b.b.a.b.x	ENSGT01090000259985.b.a.a.b.e.b	ENSGT00940000156404.`c	ENSGT00940000158216.c	ENSGT00940000156404.ac	ENSGT00940000158216.d	ENSGT00940000159292.u.a	ENSGT00390000015276.g.a #21	ENSGT00940000153239.A.e #22	ENSGT00940000158179.b.b #23	ENSGT00940000177394	ENSGT00940000164537.d	ENSGT00940000154574.d.m.a	ENSGT00940000155655.B.i.b	ENSGT00940000157230.a	ENSGT00940000155359.w.a	ENSGT01050000244842.a.b.a.p.b	ENSGT00940000156082.a.a.a	ENSGT00390000008712.d.b	ENSGT00940000156972.c.b	ENSGT00940000165362.c	ENSGT00940000153173.b.a.c	ENSGT00940000155518.m.b	ENSGT00940000157526.a.e
Cyprininae_a	ANCESTRAL SPECIES	250	ENSGT00950000183035.a.b.a.e	ENSGT00940000153904.a.g.b	ENSGT00940000155821.c.a.d	ENSGT00390000015682.m	ENSGT00480000042679.b.a.d	ENSGT00940000155219.hb.b.b	ENSGT00940000165888.e.b	ENSGT00940000158453.b.b	ENSGT01050000244897.a.b.b.a.a.c	ENSGT00940000156856.a	ENSGT01090000259985.b.b.b.a.b.x	ENSGT01090000259985.b.a.a.b.e.b	ENSGT00940000156404.`c	ENSGT00940000158216.c	ENSGT00390000015276.g.a #21	ENSGT00940000153239.A.e #22	ENSGT00940000158179.b.b #23	ENSGT00940000154574.d.m.a	ENSGT00940000155655.B.i.b	ENSGT00940000157230.a	ENSGT00940000155359.w.a.e	ENSGT01050000244842.a.b.a.p.b	ENSGT00940000156082.a.a.a	ENSGT00390000008712.d.b	ENSGT00940000156994.j	ENSGT00940000156972.c.b	ENSGT00940000165362.c	ENSGT00940000153173.b.a.c	ENSGT00940000155518.m.b
Common carp reference	MODERN SPECIES	46	EGFL6 (ENSCCRG00000059796)	ENSCCRG00000035373	ENSCCRG00000055193	ARHGAP6 (ENSCCRG00000012042)	ENSCCRG00000004236	cog3 (ENSCCRG00000017078)	cnmd (ENSCCRG00000017049)	ENSCCRG00000045966	pcdh8 (ENSCCRG00000042386)	gpc6b (ENSCCRG00000060958)	dct (ENSCCRG00000032040)	ENSCCRG00000025162	trpm2 (ENSCCRG00000030364)	ENSCCRG00000002687	TMEM169 (ENSCCRG00000065348) #21	xrcc5 (ENSCCRG00000002205) #22	MARCHF4 (ENSCCRG00000058985) #23	nme9 (ENSCCRG00000048320)	DAPL1 (ENSCCRG00000048316)	TANC1 (ENSCCRG00000063180)	WDSUB1 (ENSCCRG00000004372)	BAZ2B (ENSCCRG00000004382)	CD302 (ENSCCRG00000055696)	ENSCCRG00000076361	ENSCCRG00000061191	ENSCCRG00000039977	tank (ENSCCRG00000039987)	ENSCCRG00000006897	ENSCCRG00000013842	ifih1 (ENSCCRG00000013858)	KCNH7 (ENSCCRG00000038034)
Golden-line barbel	MODERN SPECIES	642							pcdh8 (ENSSGRG00000038145)	ENSSGRG00000038146	gpc6b (ENSSGRG00000038151)	dct (ENSSGRG00000038153)	sox21b (ENSSGRG00000038155)	ENSSGRG00000038156	ENSSGRG00000038157	trpm2 (ENSSGRG00000038158)	MAP3K13 (ENSSGRG00000038164)	xrcc5 (ENSSGRG00000038457) #22	ENSSGRG00000038604 #23
Goldfish	MODERN SPECIES	49	cnmd (ENSCARG00000002951)	PCDH8 (ENSCARG00000002956)	pcdh8 (ENSCARG00000002966)	ENSCARG00000002978	gpc6b (ENSCARG00000002996)	dct (ENSCARG00000003071)	sox21b (ENSCARG00000003089)	ENSCARG00000003098	ENSCARG00000003114	ENSCARG00000003116	ENSCARG00000003143	ENSCARG00000003151	trpm2 (ENSCARG00000003260)	MAP3K13 (ENSCARG00000004100)	TMEM169 (ENSCARG00000004624) #21	xrcc5 (ENSCARG00000004660) #22	MARCHF4 (ENSCARG00000004760) #23	dap1b (ENSCARG00000004769)	TANC1 (ENSCARG00000005026)	ENSCARG00000000281	ENSCARG00000000292	BAZ2B (ENSCARG00000000332)	ENSCARG00000000369	RBMS1 (ENSCARG00000000492)	tank (ENSCARG00000000791)	tbr1b (ENSCARG00000000803)	SLC4A10 (ENSCARG00000000930)	gcgb (ENSCARG00000001160)	ENSCARG00000001186	ENSCARG00000001391	ifih1 (ENSCARG00000001475)
Cyprininae	ANCESTRAL SPECIES	204															ENSGT00390000015276.g.b #21	ENSGT00940000153239.A.f #22	ENSGT00940000158179.b.a #23	ENSGT00940000157608 #25	ENSGT00940000164537.c	ENSGT00940000177866	ENSGT00940000154574.d.m.b	ENSGT00940000155655.B.i.a	ENSGT01050000244842.a.b.a.p.a	ENSGT00940000156082.a.a.b	ENSGT00390000008712.d.a	ENSGT00940000156994.j	ENSGT00940000156972.c.a	ENSGT00390000005372.e	ENSGT00940000165362.d	ENSGT00940000153173.b.a.d	ENSGT00940000155518.m.a
Cyprininae_a	ANCESTRAL SPECIES	67	ENSGT01100000263512.a.a.a.b.a.b.a	ENSGT00480000042679.b.a.c	ENSGT00940000155219.hb.b.a	ENSGT00940000165888.e.a	ENSGT00940000158453.b.a	ENSGT01050000244897.a.b.b.a.a.d	ENSGT00940000156856.b	ENSGT00940000162795.c.a	ENSGT01090000259985.b.b.b.a.b.w	ENSGT01090000259985.b.a.a.b.e.a	ENSGT01090000259985.b.a.a.a	ENSGT00940000156404.ac	ENSGT00940000158216.d	ENSGT00940000159292.u.a	ENSGT00390000015276.g.b #21	ENSGT00940000153239.A.f #22	ENSGT00940000158179.b.a #23	ENSGT00940000157608 #25	ENSGT00940000164537.c	ENSGT00940000154574.d.m.b	ENSGT00940000155655.B.i.a	ENSGT00940000155359.w.a.f	ENSGT01050000244842.a.b.a.p.a	ENSGT00940000156082.a.a.b	ENSGT00390000008712.d.a	ENSGT00940000156972.c.a	ENSGT00390000005372.e	ENSGT00940000165362.d	ENSGT00940000153173.b.a.d	ENSGT00940000155518.m.a	ENSGT00940000157526.a.f
Common carp reference	MODERN SPECIES	41	pcdh8 (ENSCCRG00000045962)	ENSCCRG00000071503	ENSCCRG00000042378	ENSCCRG00000058618	gpc6b (ENSCCRG00000042372)	dct (ENSCCRG00000055714)	ENSCCRG00000026190	ENSCCRG00000005937	ENSCCRG00000005926	ENSCCRG00000061604	trpm2 (ENSCCRG00000005908)	ENSCCRG00000063196	ENSCCRG00000016056	ENSCCRG00000082401	TMEM169 (ENSCCRG00000071712) #21	xrcc5 (ENSCCRG00000051660) #22	MARCHF4 (ENSCCRG00000079366) #23	SMARCAL1 (ENSCCRG00000006438) #25	nme9 (ENSCCRG00000022325)	DAPL1 (ENSCCRG00000046791)	ENSCCRG00000060286	BAZ2B (ENSCCRG00000066097)	ENSCCRG00000040179	ENSCCRG00000061550	tank (ENSCCRG00000039972)	gcgb (ENSCCRG00000042743)	ENSCCRG00000042426	ENSCCRG00000042822	ifih1 (ENSCCRG00000041831)	KCNH7 (ENSCCRG00000052114)	fign (ENSCCRG00000060501)
Zebrafish	MODERN SPECIES	24	pcdh8 (ENSDARG00000006467)	ENSDARG00000111522	ENSDARG00000074153	gpc6b (ENSDARG00000104219)	dct (ENSDARG00000006008)	sox21b (ENSDARG00000008540)	ENSDARG00000088672	ENSDARG00000090844	ENSDARG00000101527	trpm2 (ENSDARG00000101641)	ENSDARG00000099404	MAP3K13 (ENSDARG00000009493)	PFKL (ENSDARG00000060504)	ENSDARG00000101774	TMEM169 (ENSDARG00000078762) #21	xrcc5 (ENSDARG00000099298) #22	marchf4 (ENSDARG00000056439) #23	ENSDARG00000102265 #25	nme9 (ENSDARG00000098944)	ENSDARG00000109678	dap1b (ENSDARG00000086842)	TANC1 (ENSDARG00000089190)	ENSDARG00000098110	ENSDARG00000086100	ENSDARG00000103823	tank (ENSDARG00000067723)	tbr1b (ENSDARG00000004712)	SLC4A10 (ENSDARG00000060303)	gcgb (ENSDARG00000040907)	ENSDARG00000078468	ifih1 (ENSDARG00000018553)
Euteleosteomorpha	ANCESTRAL SPECIES	6	ENSGT00390000002862.ub	ENSGT00940000155953	ENSGT00950000182883.b.a.a	ENSGT00940000159677.a.b	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000158179.a #23	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00970000197261	ENSGT00940000170370	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Percomorphaceae	ANCESTRAL SPECIES	34	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Tiger tail seahorse	MODERN SPECIES	313	ercc1 (ENSHCOG00000017316)	prmt2 (ENSHCOG00000017343)	ENSHCOG00000017354	DIP2A (ENSHCOG00000017424)	ENSHCOG00000017437	ENSHCOG00000017456	ENSHCOG00000017464	hycc2 (ENSHCOG00000017492)	ENSHCOG00000017504	trpm2 (ENSHCOG00000017597)	ENSHCOG00000017618	ENSHCOG00000017629	MAP3K13 (ENSHCOG00000017685)	PFKL (ENSHCOG00000017753)	TMEM169 (ENSHCOG00000017761) #21	xrcc5 (ENSHCOG00000017773) #22	COL6A2 (ENSHCOG00000017794)	MARCHF4 (ENSHCOG00000017906) #23	SMARCAL1 (ENSHCOG00000017921) #25	ENSHCOG00000017928	nme9 (ENSHCOG00000017975)	zgc:162707 (ENSHCOG00000017988)	ehhadh (ENSHCOG00000018012)	tmem41aa (ENSHCOG00000018036)	igf2bp2a (ENSHCOG00000018090)	ANKZF1 (ENSHCOG00000018225)	glb1l (ENSHCOG00000018244)	ENSHCOG00000018260	ENSHCOG00000018273	nrp2b (ENSHCOG00000018329)	epb41l5 (ENSHCOG00000018374)
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913.q	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913.q	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b.j.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913.q	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Orange clownfish	MODERN SPECIES	3	ENSAPEG00000015043	ENSAPEG00000015062	ENSAPEG00000015099	ercc1 (ENSAPEG00000015157)	prmt2 (ENSAPEG00000015165)	ENSAPEG00000015178	ENSAPEG00000015186	DIP2A (ENSAPEG00000015236)	ENSAPEG00000015432	hycc2 (ENSAPEG00000015448)	trpm2 (ENSAPEG00000015548)	ENSAPEG00000015627	MAP3K13 (ENSAPEG00000015656)	PFKL (ENSAPEG00000015689)	TMEM169 (ENSAPEG00000015766) #21	xrcc5 (ENSAPEG00000015778) #22	ENSAPEG00000015807	ENSAPEG00000015813	MARCHF4 (ENSAPEG00000015828) #23	SMARCAL1 (ENSAPEG00000015861) #25	nme9 (ENSAPEG00000015896)	zgc:162707 (ENSAPEG00000015979)	ehhadh (ENSAPEG00000015995)	tmem41aa (ENSAPEG00000016010)	igf2bp2a (ENSAPEG00000016037)	tra2b (ENSAPEG00000016141)	ENSAPEG00000016161	ENSAPEG00000016190	ENSAPEG00000016246	glb1l (ENSAPEG00000016270)	ENSAPEG00000016354
Clown anemonefish	MODERN SPECIES	3365																xrcc5 (ENSAOCG00000014125) #22	COL6A2 (ENSAOCG00000014185)	ENSAOCG00000014210 #23	SMARCAL1 (ENSAOCG00000014266) #25	nme9 (ENSAOCG00000014350)
Spiny chromis	MODERN SPECIES	247	ENSAPOG00000019263	ENSAPOG00000019299	ercc1 (ENSAPOG00000019312)	ENSAPOG00000019351	ENSAPOG00000019370	prmt2 (ENSAPOG00000019380)	ENSAPOG00000019453	DIP2A (ENSAPOG00000019584)	ENSAPOG00000019602	ENSAPOG00000019607	hycc2 (ENSAPOG00000019672)	trpm2 (ENSAPOG00000019812)	MAP3K13 (ENSAPOG00000019855)	PFKL (ENSAPOG00000019989)	TMEM169 (ENSAPOG00000019993) #21	xrcc5 (ENSAPOG00000020006) #22	COL6A2 (ENSAPOG00000020016)	MARCHF4 (ENSAPOG00000020079) #23	SMARCAL1 (ENSAPOG00000020156) #25	nme9 (ENSAPOG00000020251)	zgc:162707 (ENSAPOG00000020273)	ehhadh (ENSAPOG00000020301)	ehhadh (ENSAPOG00000020320)
Bicolor damselfish	MODERN SPECIES	2033															TMEM169 (ENSSPAG00000003938) #21	xrcc5 (ENSSPAG00000003888) #22	ENSSPAG00000003870	ENSSPAG00000003864	MARCHF4 (ENSSPAG00000003844) #23	SMARCAL1 (ENSSPAG00000003742) #25	ENSSPAG00000003725	nme9 (ENSSPAG00000003690)
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a	ENSGT00940000164866.q.a.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a	ENSGT00940000164866.q.a.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d
Lyretail cichlid	MODERN SPECIES	303	ENSNBRG00000017391	ENSNBRG00000017353	ercc1 (ENSNBRG00000017310)	prmt2 (ENSNBRG00000017273)	ENSNBRG00000017262	ENSNBRG00000017248	DIP2A (ENSNBRG00000017189)	ENSNBRG00000017163	hycc2 (ENSNBRG00000017132)	ENSNBRG00000016863	trpm2 (ENSNBRG00000016802)	ENSNBRG00000016764	MAP3K13 (ENSNBRG00000016703)	PFKL (ENSNBRG00000016638)	TMEM169 (ENSNBRG00000016609) #21	xrcc5 (ENSNBRG00000016487) #22	COL6A2 (ENSNBRG00000016418)	ENSNBRG00000016401	MARCHF4 (ENSNBRG00000016380) #23	SMARCAL1 (ENSNBRG00000016273) #25	ENSNBRG00000016254	nme9 (ENSNBRG00000016220)	zgc:162707 (ENSNBRG00000016203)	ehhadh (ENSNBRG00000016194)	tmem41aa (ENSNBRG00000016175)	igf2bp2a (ENSNBRG00000016140)	tra2b (ENSNBRG00000016092)	ENSNBRG00000016058	ENSNBRG00000016037	ENSNBRG00000016024	ENSNBRG00000016017
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a	ENSGT00940000164866.r	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d
Burton s mouthbrooder	MODERN SPECIES	292	ARSD (ENSHBUG00000002466)	ENSHBUG00000002478	ENSHBUG00000002501	ercc1 (ENSHBUG00000002515)	prmt2 (ENSHBUG00000002521)	ENSHBUG00000002524	ENSHBUG00000002551	ENSHBUG00000002573	DIP2A (ENSHBUG00000002696)	ENSHBUG00000001010	hycc2 (ENSHBUG00000001171)	trpm2 (ENSHBUG00000002764)	MAP3K13 (ENSHBUG00000002814)	PFKL (ENSHBUG00000002877)	TMEM169 (ENSHBUG00000002883) #21	xrcc5 (ENSHBUG00000002906) #22	COL6A2 (ENSHBUG00000002922)	ENSHBUG00000002949	MARCHF4 (ENSHBUG00000000068) #23	SMARCAL1 (ENSHBUG00000002973) #25	nme9 (ENSHBUG00000003004)	zgc:162707 (ENSHBUG00000003020)	ehhadh (ENSHBUG00000003028)	tmem41aa (ENSHBUG00000003047)	igf2bp2a (ENSHBUG00000003126)	tra2b (ENSHBUG00000003145)	ENSHBUG00000003161	ENSHBUG00000003190	ANKZF1 (ENSHBUG00000003208)	glb1l (ENSHBUG00000003243)	ENSHBUG00000003332
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.q.a.b.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d
P. nyererei	MODERN SPECIES	304	ENSPNYG00000019580	ercc1 (ENSPNYG00000019606)	prmt2 (ENSPNYG00000019621)	ENSPNYG00000019648	ENSPNYG00000019666	ENSPNYG00000019701	ENSPNYG00000019740	ENSPNYG00000019776	DIP2A (ENSPNYG00000019802)	ENSPNYG00000019883	hycc2 (ENSPNYG00000019965)	trpm2 (ENSPNYG00000000679)	MAP3K13 (ENSPNYG00000000790)	PFKL (ENSPNYG00000000802)	TMEM169 (ENSPNYG00000000898) #21	xrcc5 (ENSPNYG00000000911) #22	ENSPNYG00000000925	ENSPNYG00000000944	ENSPNYG00000000965	ENSPNYG00000000972	MARCHF4 (ENSPNYG00000000999) #23	SMARCAL1 (ENSPNYG00000001058) #25	ENSPNYG00000001099	nme9 (ENSPNYG00000001110)	zgc:162707 (ENSPNYG00000001153)	ehhadh (ENSPNYG00000001157)	ENSPNYG00000001166	igf2bp2a (ENSPNYG00000001187)	tra2b (ENSPNYG00000001238)	ENSPNYG00000001248	ENSPNYG00000001277
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000165332.B	ENSGT00940000160683	ENSGT00940000164866.q.a.b.a	ENSGT00940000164866.q.b	ENSGT00940000164866.q.a.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00950000183126.a.p.a.o.b	ENSGT00950000183126.a.p.a.o.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911
Eastern happy	MODERN SPECIES	7	ENSACLG00000017506	ercc1 (ENSACLG00000017486)	ENSACLG00000017480	prmt2 (ENSACLG00000017462)	ENSACLG00000017436	ENSACLG00000017330	ENSACLG00000017318	ENSACLG00000017309	DIP2A (ENSACLG00000016955)	ENSACLG00000016906	hycc2 (ENSACLG00000016763)	trpm2 (ENSACLG00000016644)	MAP3K13 (ENSACLG00000016481)	PFKL (ENSACLG00000016404)	TMEM169 (ENSACLG00000016388) #21	xrcc5 (ENSACLG00000016331) #22	COL6A2 (ENSACLG00000016186)	ENSACLG00000016169	ENSACLG00000016093	MARCHF4 (ENSACLG00000016071) #23	SMARCAL1 (ENSACLG00000015990) #25	nme9 (ENSACLG00000015875)	zgc:162707 (ENSACLG00000015853)	ehhadh (ENSACLG00000015819)	tmem41aa (ENSACLG00000015796)	igf2bp2a (ENSACLG00000015512)	tra2b (ENSACLG00000015461)	ENSACLG00000015432	ENSACLG00000015369	ANKZF1 (ENSACLG00000015301)	glb1l (ENSACLG00000015236)
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	1098	fign (ENSMZEG00005007032)	KCNH7 (ENSMZEG00005007089)	ifih1 (ENSMZEG00005007158)	ENSMZEG00005007202	gcgb (ENSMZEG00005007228)	SLC4A10 (ENSMZEG00005007236)	tbr1b (ENSMZEG00005007278)	tank (ENSMZEG00005007292)	RBMS1 (ENSMZEG00005007313)	CD302 (ENSMZEG00005007347)	BAZ2B (ENSMZEG00005007380)	ENSMZEG00005007519	WDSUB1 (ENSMZEG00005007538)	TANC1 (ENSMZEG00005007557)	TMEM169 (ENSMZEG00005007585) #21	xrcc5 (ENSMZEG00005007591) #22	ENSMZEG00005007607	ENSMZEG00005007621	ENSMZEG00005007629	ENSMZEG00005007645	MARCHF4 (ENSMZEG00005007652) #23	SMARCAL1 (ENSMZEG00005007660) #25	ENSMZEG00005007691	nme9 (ENSMZEG00005007697)	zgc:162707 (ENSMZEG00005007724)	ehhadh (ENSMZEG00005007744)	tmem41aa (ENSMZEG00005007760)	igf2bp2a (ENSMZEG00005007777)	tra2b (ENSMZEG00005007817)	ENSMZEG00005007848	ENSMZEG00005007865
Zebra mbuna	MODERN SPECIES	1098	prmt2 (ENSMZEG00005009630)	ENSMZEG00005009612	ENSMZEG00005009599	ntm (ENSMZEG00005009583)	opcml (ENSMZEG00005009567)	ENSMZEG00005009556	ENSMZEG00005009545	ENSMZEG00005009529	DIP2A (ENSMZEG00005009388)	ENSMZEG00005009363	hycc2 (ENSMZEG00005009350)	trpm2 (ENSMZEG00005009295)	MAP3K13 (ENSMZEG00005009269)	PFKL (ENSMZEG00005009192)	TMEM169 (ENSMZEG00005009179) #21	xrcc5 (ENSMZEG00005009043) #22	ENSMZEG00005009014	TANC1 (ENSMZEG00005008882)	DAPL1 (ENSMZEG00005008853)	PKP4 (ENSMZEG00005008828)	ENSMZEG00005008806	upp2 (ENSMZEG00005008793)	ENSMZEG00005008772	ENSMZEG00005008721	ACVR1C (ENSMZEG00005008690)	CYTIP (ENSMZEG00005008668)	GALNT5 (ENSMZEG00005008302)	ENSMZEG00005008236	nr4a2a (ENSMZEG00005008220)	KCNJ3 (ENSMZEG00005008210)	GALNT13 (ENSMZEG00005008166)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000004142	ENSONIG00000004137	ercc1 (ENSONIG00000004132)	prmt2 (ENSONIG00000004127)	ENSONIG00000036478	ENSONIG00000037894	ENSONIG00000040443	DIP2A (ENSONIG00000009096)	ENSONIG00000032971	ENSONIG00000009095	fam126b (ENSONIG00000031870)	trpm2 (ENSONIG00000009086)	MAP3K13 (ENSONIG00000009084)	PFKL (ENSONIG00000009075)	tmem169 (ENSONIG00000036428) #21	xrcc5 (ENSONIG00000009057) #22	COL6A2 (ENSONIG00000009044)	ENSONIG00000009040	ENSONIG00000034118	ENSONIG00000036866	MARCHF4 (ENSONIG00000009038) #23	SMARCAL1 (ENSONIG00000009036) #25	nme9 (ENSONIG00000009034)	zgc:162707 (ENSONIG00000029797)	ehhadh (ENSONIG00000036880)	tmem41aa (ENSONIG00000040431)	igf2bp2a (ENSONIG00000009029)	tra2b (ENSONIG00000009025)	ENSONIG00000009023	ENSONIG00000009020	ANKZF1 (ENSONIG00000009018)
Midas cichlid	MODERN SPECIES	1312								DIP2A (ENSACIG00000002167)	ENSACIG00000002126	hycc2 (ENSACIG00000002107)	ENSACIG00000002037	ENSACIG00000002000	MAP3K13 (ENSACIG00000001962)	PFKL (ENSACIG00000001893)	TMEM169 (ENSACIG00000001883) #21	xrcc5 (ENSACIG00000001685) #22	ENSACIG00000001656	ENSACIG00000001629	ENSACIG00000001602	MARCHF4 (ENSACIG00000001550) #23	SMARCAL1 (ENSACIG00000001500) #25	ENSACIG00000001490	nme9 (ENSACIG00000001452)	zgc:162707 (ENSACIG00000001437)	ehhadh (ENSACIG00000001368)	tmem41aa (ENSACIG00000001348)	igf2bp2a (ENSACIG00000001308)	tra2b (ENSACIG00000001289)	ENSACIG00000001261	ENSACIG00000001218	ANKZF1 (ENSACIG00000001142)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT01010000223530.a	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Mangrove rivulus	MODERN SPECIES	78									DIP2A (ENSKMAG00000011203)	ENSKMAG00000011549	hycc2 (ENSKMAG00000011583)	trpm2 (ENSKMAG00000011719)	MAP3K13 (ENSKMAG00000011794)	PFKL (ENSKMAG00000011853)	TMEM169 (ENSKMAG00000011897) #21	xrcc5 (ENSKMAG00000011921) #22	COL6A2 (ENSKMAG00000011962)	MARCHF4 (ENSKMAG00000012001) #23	SMARCAL1 (ENSKMAG00000012023) #25	nme9 (ENSKMAG00000012056)	zgc:162707 (ENSKMAG00000012092)	ehhadh (ENSKMAG00000012099)	tmem41aa (ENSKMAG00000012117)	igf2bp2a (ENSKMAG00000012177)	tra2b (ENSKMAG00000012273)	ENSKMAG00000012295	ENSKMAG00000012311	ANKZF1 (ENSKMAG00000012399)	glb1l (ENSKMAG00000012339)	ENSKMAG00000012478	ENSKMAG00000012654
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015025218	ENSNFUG00015025216	ercc1 (ENSNFUG00015025214)	prmt2 (ENSNFUG00015025212)	CABZ01067071.1 (ENSNFUG00015025211)	ENSNFUG00015025210	DIP2A (ENSNFUG00015025203)	ENSNFUG00015025202	CFLAR (ENSNFUG00015025201)	FAM126B (ENSNFUG00015025198)	TRPM2 (ENSNFUG00015025173)	MAP3K13 (ENSNFUG00015025154)	ENSNFUG00015025139	PFKL (ENSNFUG00015025023)	TMEM169 (ENSNFUG00015025012) #21	xrcc5 (ENSNFUG00015024995) #22	COL6A2 (ENSNFUG00015024962)	DNAL1 (ENSNFUG00015024954)	MARCH4 (ENSNFUG00015024950) #23	SMARCAL1 (ENSNFUG00015024913) #25	nme9 (ENSNFUG00015024888)	zgc:162707 (ENSNFUG00015024880)	ehhadh (ENSNFUG00015024876)	TMEM41AA (ENSNFUG00015024872)	IGF2BP2A (ENSNFUG00015024804)	tra2b (ENSNFUG00015024781)	ENSNFUG00015024694	ENSNFUG00015024684	ANKZF1 (ENSNFUG00015024679)	ENSNFUG00015024604	ENSNFUG00015024585
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
NAME_4	ANCESTRAL SPECIES	32	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Sheepshead minnow	MODERN SPECIES	468	snx4 (ENSCVAG00000019663)	ARSD (ENSCVAG00000019609)	ENSCVAG00000019594	ENSCVAG00000019566	ercc1 (ENSCVAG00000019532)	prmt2 (ENSCVAG00000019527)	ENSCVAG00000019519	ENSCVAG00000019510	DIP2A (ENSCVAG00000019472)	ENSCVAG00000019371	hycc2 (ENSCVAG00000019237)	trpm2 (ENSCVAG00000019145)	MAP3K13 (ENSCVAG00000019010)	PFKL (ENSCVAG00000018982)	TMEM169 (ENSCVAG00000018924) #21	xrcc5 (ENSCVAG00000018914) #22	ENSCVAG00000018898	ENSCVAG00000018852	MARCHF9 (ENSCVAG00000018810)	SMARCAL1 (ENSCVAG00000018780) #25	ENSCVAG00000018766	nme9 (ENSCVAG00000018754)
Mummichog	MODERN SPECIES	2402				DIP2A (ENSFHEG00000009229)	ENSFHEG00000009144	ENSFHEG00000009095	hycc2 (ENSFHEG00000009077)	ENSFHEG00000009018	ENSFHEG00000008954	ENSFHEG00000008885	ENSFHEG00000008813	ENSFHEG00000008787	MAP3K13 (ENSFHEG00000008670)	PFKL (ENSFHEG00000008593)	TMEM169 (ENSFHEG00000008494) #21	xrcc5 (ENSFHEG00000008475) #22	ENSFHEG00000008458	ENSFHEG00000008422	MARCHF4 (ENSFHEG00000008402) #23	SMARCAL1 (ENSFHEG00000008380) #25	nme9 (ENSFHEG00000008367)	zgc:162707 (ENSFHEG00000008323)	ehhadh (ENSFHEG00000008315)	tmem41aa (ENSFHEG00000008292)	igf2bp2a (ENSFHEG00000008263)	tra2b (ENSFHEG00000008203)	ENSFHEG00000008189	ENSFHEG00000008172	ENSFHEG00000008104	glb1l (ENSFHEG00000008073)	ENSFHEG00000007986
Poeciliinae	ANCESTRAL SPECIES	25	ENSGT00940000159942.a.c.b.f	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.o.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404.nb.b.a.a.a	ENSGT00940000156404.nb.a	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158208.b	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000159942.a.c.b.f	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.o.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404.nb.b.a.a.a	ENSGT00940000156404.nb.a	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158208.b	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
NAME_6	ANCESTRAL SPECIES	265		ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.o.a	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404.nb.b.a.a.a	ENSGT00940000156404.nb.a	ENSGT00940000158216	ENSGT00940000159292	ENSGT00740000117080	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158208.b	ENSGT00940000157608 #25	ENSGT00940000164537
Amazon molly	MODERN SPECIES	697											trpm2 (ENSPFOG00000000056)	MAP3K13 (ENSPFOG00000000130)	PFKL (ENSPFOG00000000166)	ENSPFOG00000023152	TMEM169 (ENSPFOG00000000226) #21	xrcc5 (ENSPFOG00000000246) #22	COL6A2 (ENSPFOG00000000302)	MARCHF9 (ENSPFOG00000000507)	SMARCAL1 (ENSPFOG00000000560) #25	nme9 (ENSPFOG00000000739)
Sailfin molly	MODERN SPECIES	268		ercc1 (ENSPLAG00000000472)	prmt2 (ENSPLAG00000022074)	ENSPLAG00000022041	ENSPLAG00000022010	ENSPLAG00000021985	DIP2A (ENSPLAG00000021961)	ENSPLAG00000021848	hycc2 (ENSPLAG00000021843)	ENSPLAG00000021829	trpm2 (ENSPLAG00000021799)	trpm2 (ENSPLAG00000021685)	MAP3K13 (ENSPLAG00000021630)	PFKL (ENSPLAG00000021587)	TMEM169 (ENSPLAG00000021551) #21	xrcc5 (ENSPLAG00000021546) #22	COL6A2 (ENSPLAG00000021540)	ENSPLAG00000021527	MARCHF9 (ENSPLAG00000021521)
Guppy	MODERN SPECIES	450	ENSPREG00000010525	ENSPREG00000010502	ENSPREG00000010465	ercc1 (ENSPREG00000010451)	prmt2 (ENSPREG00000010427)	ENSPREG00000010413	ENSPREG00000010406	ENSPREG00000010389	DIP2A (ENSPREG00000010145)	ENSPREG00000010084	hycc2 (ENSPREG00000010028)	TRPM2 (ENSPREG00000009936)	MAP3K13 (ENSPREG00000009876)	PFKL (ENSPREG00000009825)	TMEM169 (ENSPREG00000009814) #21	xrcc5 (ENSPREG00000009711) #22	COL6A2 (ENSPREG00000009680)	MARCHF9 (ENSPREG00000009664)	SMARCAL1 (ENSPREG00000009591) #25	ENSPREG00000009577	nme9 (ENSPREG00000009546)	zgc:162707 (ENSPREG00000009511)	ehhadh (ENSPREG00000009505)	tmem41aa (ENSPREG00000009491)	igf2bp2a (ENSPREG00000009440)	tra2b (ENSPREG00000009405)	ENSPREG00000009384	ENSPREG00000009375	ANKZF1 (ENSPREG00000009367)	glb1l (ENSPREG00000009301)	ENSPREG00000009173
Platyfish	MODERN SPECIES	21	ARSD (ENSXMAG00000015844)	ENSXMAG00000015840	ENSXMAG00000015816	ercc1 (ENSXMAG00000015806)	prmt2 (ENSXMAG00000015793)	ENSXMAG00000026615	ENSXMAG00000016351	DIP2A (ENSXMAG00000016253)	ENSXMAG00000015789	hycc2 (ENSXMAG00000015770)	trpm2 (ENSXMAG00000015757)	trpm2 (ENSXMAG00000015702)	MAP3K13 (ENSXMAG00000015692)	PFKL (ENSXMAG00000015646)	TMEM169 (ENSXMAG00000015642) #21	xrcc5 (ENSXMAG00000015625) #22	COL6A2 (ENSXMAG00000015599)	MARCHF9 (ENSXMAG00000021114)	SMARCAL1 (ENSXMAG00000015575) #25	nme9 (ENSXMAG00000015556)	zgc:162707 (ENSXMAG00000022603)	ehhadh (ENSXMAG00000021635)	tmem41aa (ENSXMAG00000015534)	igf2bp2a (ENSXMAG00000015507)	tra2b (ENSXMAG00000001784)	ENSXMAG00000015483	ENSXMAG00000015480	ENSXMAG00000015465	glb1l (ENSXMAG00000015413)	ENSXMAG00000015372	ENSXMAG00000015370
Oryzias	ANCESTRAL SPECIES	10	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.l.a	ENSGT01100000263521.b	ENSGT00940000164866.k	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Oryzias_a	ANCESTRAL SPECIES	21	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.l.a	ENSGT00940000164866.l.b	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00940000164984
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000028523	ENSORLG00000016217	ercc1 (ENSORLG00000016225)	prmt2 (ENSORLG00000016240)	ENSORLG00000016243	ENSORLG00000024731	ENSORLG00000019524	ENSORLG00000025038	DIP2A (ENSORLG00000016258)	cflar (ENSORLG00000016267)	hycc2 (ENSORLG00000016277)	trpm2 (ENSORLG00000016331)	MAP3K13 (ENSORLG00000016342)	PFKL (ENSORLG00000016369)	TMEM169 (ENSORLG00000022975) #21	xrcc5 (ENSORLG00000016396) #22	ENSORLG00000016429	ENSORLG00000021789	MARCHF4 (ENSORLG00000016440) #23	SMARCAL1 (ENSORLG00000016455) #25	nme9 (ENSORLG00000016469)	zgc:162707 (ENSORLG00000016472)	ehhadh (ENSORLG00000016481)	tmem41aa (ENSORLG00000016494)	igf2bp2a (ENSORLG00000016532)	tra2b (ENSORLG00000016554)	mc6ast5 (ENSORLG00000016557)	mc6ast4 (ENSORLG00000016562)	ANKZF1 (ENSORLG00000016576)	glb1l (ENSORLG00000016596)	ENSORLG00000016635
Chinese medaka	MODERN SPECIES	394												ENSOSIG00000016320	hycc2 (ENSOSIG00000016326)	MAP3K13 (ENSOSIG00000016340)	TMEM169 (ENSOSIG00000016405) #21	xrcc5 (ENSOSIG00000016456) #22	MARCHF4 (ENSOSIG00000017519) #23	nme9 (ENSOSIG00000017529)	zgc:162707 (ENSOSIG00000017536)	ehhadh (ENSOSIG00000017540)	tmem41aa (ENSOSIG00000003680)	igf2bp2a (ENSOSIG00000003887)	tra2b (ENSOSIG00000007785)	ENSOSIG00000007802	ENSOSIG00000007804	ANKZF1 (ENSOSIG00000007807)	ENSOSIG00000007910	ENSOSIG00000009610	FMNL2 (ENSOSIG00000009636)	prpf40a (ENSOSIG00000010934)	rprmb (ENSOSIG00000011673)
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866.l.a	ENSGT01100000263521.b	ENSGT00940000164866.k	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911.k	ENSGT00390000005911.l	ENSGT00950000182942.a.b
Indian medaka	MODERN SPECIES	18	snx4 (ENSOMEG00000001521)	ARSD (ENSOMEG00000001528)	ENSOMEG00000001545	ENSOMEG00000001560	ercc1 (ENSOMEG00000001587)	prmt2 (ENSOMEG00000001593)	ENSOMEG00000001598	ENSOMEG00000001602	DIP2A (ENSOMEG00000001649)	ENSOMEG00000001680	hycc2 (ENSOMEG00000001700)	trpm2 (ENSOMEG00000001747)	MAP3K13 (ENSOMEG00000001768)	PFKL (ENSOMEG00000001783)	TMEM169 (ENSOMEG00000001790) #21	xrcc5 (ENSOMEG00000001816) #22	ENSOMEG00000001820	ENSOMEG00000001828	MARCHF4 (ENSOMEG00000001832) #23	SMARCAL1 (ENSOMEG00000001845) #25	nme9 (ENSOMEG00000001858)	zgc:162707 (ENSOMEG00000001863)	ehhadh (ENSOMEG00000001872)	tmem41aa (ENSOMEG00000001879)	igf2bp2a (ENSOMEG00000001908)	tra2b (ENSOMEG00000000738)	ENSOMEG00000001926	ENSOMEG00000001932	ENSOMEG00000001937	ENSOMEG00000001944	glb1l (ENSOMEG00000001962)
Javanese ricefish	MODERN SPECIES	13	ERBB4 (ENSOJAG00000023771) #8	IKZF2 (ENSOJAG00000023709) #10	vwc2l (ENSOJAG00000023705) #13	BARD1 (ENSOJAG00000023702) #14	ABCA12 (ENSOJAG00000023678) #15	pofut2 (ENSOJAG00000023650)	MPPED1 (ENSOJAG00000023646)	slco1d1 (ENSOJAG00000023608)	SLC2A13 (ENSOJAG00000023581)	DIP2A (ENSOJAG00000023414)	ENSOJAG00000023347	hycc2 (ENSOJAG00000023326)	MAP3K13 (ENSOJAG00000023295)	PFKL (ENSOJAG00000023258)	TMEM169 (ENSOJAG00000023227) #21	xrcc5 (ENSOJAG00000023123) #22	MARCHF4 (ENSOJAG00000023073) #23	SMARCAL1 (ENSOJAG00000022962) #25	nme9 (ENSOJAG00000022929)	zgc:162707 (ENSOJAG00000022928)	ehhadh (ENSOJAG00000022915)	tmem41aa (ENSOJAG00000022894)	igf2bp2a (ENSOJAG00000022770)	tra2b (ENSOJAG00000022708)	ENSOJAG00000022707	ENSOJAG00000022701	ANKZF1 (ENSOJAG00000022699)	ENSOJAG00000022216	ENSOJAG00000022176	prpf40a (ENSOJAG00000021781)	rprmb (ENSOJAG00000021776)
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b
Eupercaria	ANCESTRAL SPECIES	25	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Fugu	MODERN SPECIES		ENSTRUG00000013178	ENSTRUG00000029899	ENSTRUG00000022269	ercc1 (ENSTRUG00000013151)	prmt2 (ENSTRUG00000013061)	ENSTRUG00000027529	ENSTRUG00000013037	DIP2A (ENSTRUG00000012903)	ENSTRUG00000012711	hycc2 (ENSTRUG00000012635)	ENSTRUG00000023328	trpm2 (ENSTRUG00000012200)	MAP3K13 (ENSTRUG00000012102)	PFKL (ENSTRUG00000011575)	TMEM169 (ENSTRUG00000011553) #21	xrcc5 (ENSTRUG00000011292) #22	COL6A2 (ENSTRUG00000010965)	MARCHF4 (ENSTRUG00000010920) #23	SMARCAL1 (ENSTRUG00000010701) #25	nme9 (ENSTRUG00000010490)	zgc:162707 (ENSTRUG00000027774)	ehhadh (ENSTRUG00000010383)	tmem41aa (ENSTRUG00000010355)	igf2bp2a (ENSTRUG00000009908)	ENSTRUG00000020345	fgc6ast2 (ENSTRUG00000009748)	ANKZF1 (ENSTRUG00000009630)	glb1l (ENSTRUG00000009251)	ENSTRUG00000008967	ENSTRUG00000024914	sumo3a (ENSTRUG00000025879)
Tetraodon	MODERN SPECIES	13	ihha (ENSTNIG00000016449)	snx4 (ENSTNIG00000016450)	ARSD (ENSTNIG00000016451)	ENSTNIG00000016452	ENSTNIG00000016453	ercc1 (ENSTNIG00000016454)	prmt2 (ENSTNIG00000016455)	ENSTNIG00000016456	DIP2A (ENSTNIG00000016457)	ENSTNIG00000016458	hycc2 (ENSTNIG00000016459)	trpm2 (ENSTNIG00000016460)	MAP3K13 (ENSTNIG00000016461)	PFKL (ENSTNIG00000016462)	TMEM169 (ENSTNIG00000016463) #21	xrcc5 (ENSTNIG00000016464) #22	COL6A2 (ENSTNIG00000016465)	MARCHF4 (ENSTNIG00000016466) #23	SMARCAL1 (ENSTNIG00000016467) #25	nme9 (ENSTNIG00000016468)	zgc:162707 (ENSTNIG00000016469)	ehhadh (ENSTNIG00000016470)	tmem41aa (ENSTNIG00000016471)	igf2bp2a (ENSTNIG00000016472)	tra2b (ENSTNIG00000000790)	ENSTNIG00000016473	ENSTNIG00000016474	ANKZF1 (ENSTNIG00000016475)	glb1l (ENSTNIG00000016476)	ENSTNIG00000000645	ENSTNIG00000016477
Eupecaria_A	ANCESTRAL SPECIES	24	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000177394	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Ballan wrasse	MODERN SPECIES	387		prmt2 (ENSLBEG00000001807)	ENSLBEG00000001858	ENSLBEG00000001880	DIP2A (ENSLBEG00000002017)	ENSLBEG00000002132	hycc2 (ENSLBEG00000002161)	trpm2 (ENSLBEG00000002282)	ENSLBEG00000002645	ENSLBEG00000002693	ENSLBEG00000002747	ENSLBEG00000003014	MAP3K13 (ENSLBEG00000003152)	PFKL (ENSLBEG00000003240)	TMEM169 (ENSLBEG00000003297) #21	xrcc5 (ENSLBEG00000003316) #22	COL6A2 (ENSLBEG00000003366)	MARCHF4 (ENSLBEG00000003451) #23	SMARCAL1 (ENSLBEG00000003493) #25	ENSLBEG00000003548	nme9 (ENSLBEG00000003566)	zgc:162707 (ENSLBEG00000003609)	ehhadh (ENSLBEG00000003623)	tmem41aa (ENSLBEG00000003655)	igf2bp2a (ENSLBEG00000003710)	ENSLBEG00000003842
Eupecaria_B	ANCESTRAL SPECIES	24	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Perciformes	ANCESTRAL SPECIES	23	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Lumpfish	MODERN SPECIES	13	snx4 (ENSCLMG00005022249)	ARSD (ENSCLMG00005022248)	ENSCLMG00005022247	ENSCLMG00005022246	ercc1 (ENSCLMG00005022245)	ENSCLMG00005022244	ENSCLMG00005022243	ENSCLMG00005022242	DIP2A (ENSCLMG00005020925)	ENSCLMG00005020839	hycc2 (ENSCLMG00005020836)	trpm2 (ENSCLMG00005020832)	MAP3K13 (ENSCLMG00005020572)	PFKL (ENSCLMG00005020466)	TMEM169 (ENSCLMG00005020464) #21	xrcc5 (ENSCLMG00005020365) #22	COL6A2 (ENSCLMG00005020111)	MARCHF4 (ENSCLMG00005020098) #23	SMARCAL1 (ENSCLMG00005020081) #25	ENSCLMG00005020079	nme9 (ENSCLMG00005020077)	zgc:162707 (ENSCLMG00005020075)	ehhadh (ENSCLMG00005020073)	tmem41aa (ENSCLMG00005020072)	igf2bp2a (ENSCLMG00005020011)	tra2b (ENSCLMG00005019973)	ENSCLMG00005019965	ENSCLMG00005019962	ANKZF1 (ENSCLMG00005019959)	glb1l (ENSCLMG00005019763)	ENSCLMG00005019559
Stickleback	MODERN SPECIES	16	ENSGACG00000006317	ENSGACG00000006314	ENSGACG00000006312	ercc1 (ENSGACG00000006301)	prmt2 (ENSGACG00000006286)	ENSGACG00000006283	ENSGACG00000006275	DIP2A (ENSGACG00000006240)	ENSGACG00000006235	hycc2 (ENSGACG00000006226)	trpm2 (ENSGACG00000006218)	trpm2 (ENSGACG00000006203)	MAP3K13 (ENSGACG00000006196)	PFKL (ENSGACG00000006173)	TMEM169 (ENSGACG00000006165) #21	xrcc5 (ENSGACG00000006130) #22	COL6A2 (ENSGACG00000006089)	MARCHF4 (ENSGACG00000006082) #23	SMARCAL1 (ENSGACG00000006073) #25	nme9 (ENSGACG00000006066)	zgc:162707 (ENSGACG00000006064)	ehhadh (ENSGACG00000006057)	tmem41aa (ENSGACG00000006043)	igf2bp2a (ENSGACG00000005991)	tra2b (ENSGACG00000005986)	ENSGACG00000005978	ENSGACG00000005972	glb1l (ENSGACG00000005954)	ENSGACG00000005949	ENSGACG00000005937	ENSGACG00000005931
Perciformes_a	ANCESTRAL SPECIES	23	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Pike perch	MODERN SPECIES	1	ercc1 (ENSSLUG00000008493)	prmt2 (ENSSLUG00000008483)	ENSSLUG00000008475	ENSSLUG00000008464	DIP2A (ENSSLUG00000000757)	ENSSLUG00000000142	hycc2 (ENSSLUG00000000104)	ENSSLUG00000000087	ENSSLUG00000000083	trpm2 (ENSSLUG00000000073)	trpm2 (ENSSLUG00000000054)	ENSSLUG00000000050	MAP3K13 (ENSSLUG00000023747)	PFKL (ENSSLUG00000023509)	TMEM169 (ENSSLUG00000023466) #21	xrcc5 (ENSSLUG00000023452) #22	ENSSLUG00000023446	MARCHF4 (ENSSLUG00000023443) #23	SMARCAL1 (ENSSLUG00000023356) #25	nme9 (ENSSLUG00000023329)	ENSSLUG00000023325	zgc:162707 (ENSSLUG00000023322)	ehhadh (ENSSLUG00000023319)	tmem41aa (ENSSLUG00000023315)	igf2bp2a (ENSSLUG00000023280)	tra2b (ENSSLUG00000023261)	ENSSLUG00000023250	ENSSLUG00000023243	ANKZF1 (ENSSLUG00000023223)	glb1l (ENSSLUG00000022637)	ENSSLUG00000021961
Channel bull blenny	MODERN SPECIES	13	sik1 (ENSCGOG00000019947)	u2af1 (ENSCGOG00000019940)	gabpa (ENSCGOG00000019802)	appb (ENSCGOG00000019644)	piga (ENSCGOG00000019638)	asb11 (ENSCGOG00000019636)	GRPR (ENSCGOG00000019633)	xk (ENSCGOG00000019630)	DYNLT3 (ENSCGOG00000019627)	SYTL5 (ENSCGOG00000019557)	srpx (ENSCGOG00000019551)	ENSCGOG00000019549	ENSCGOG00000019548	PFKL (ENSCGOG00000013823)	TMEM169 (ENSCGOG00000013665) #21	xrcc5 (ENSCGOG00000013112) #22	COL6A2 (ENSCGOG00000024729)	MARCHF4 (ENSCGOG00000024728) #23	SMARCAL1 (ENSCGOG00000024727) #25	nme9 (ENSCGOG00000024726)	zgc:162707 (ENSCGOG00000024725)	ehhadh (ENSCGOG00000024724)	tmem41aa (ENSCGOG00000024723)	igf2bp2a (ENSCGOG00000024722)	tra2b (ENSCGOG00000024721)	ENSCGOG00000024720	ENSCGOG00000024719	ANKZF1 (ENSCGOG00000024717)	glb1l (ENSCGOG00000024716)	ENSCGOG00000024715	ENSCGOG00000024714
Eupecaria_C	ANCESTRAL SPECIES	24	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	24	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Large yellow croaker	MODERN SPECIES	490	ARSD (ENSLCRG00005021977)	ENSLCRG00005022015	ENSLCRG00005000815	ercc1 (ENSLCRG00005000836)	prmt2 (ENSLCRG00005000855)	ENSLCRG00005000869	ENSLCRG00005000879	DIP2A (ENSLCRG00005000968)	ENSLCRG00005003528	hycc2 (ENSLCRG00005003539)	trpm2 (ENSLCRG00005003855)	MAP3K13 (ENSLCRG00005006646)	PFKL (ENSLCRG00005007069)	TMEM169 (ENSLCRG00005007803) #21	TMEM169 (ENSLCRG00005007806) #21	xrcc5 (ENSLCRG00005007819) #22	COL6A2 (ENSLCRG00005009580)	SMARCAL1 (ENSLCRG00005009591) #25	nme9 (ENSLCRG00005009804)	zgc:162707 (ENSLCRG00005009805)	ehhadh (ENSLCRG00005009806)	tmem41aa (ENSLCRG00005009808)	igf2bp2a (ENSLCRG00005009811)	ENSLCRG00005010177	tra2b (ENSLCRG00005010179)	ENSLCRG00005010183	ENSLCRG00005010188	ANKZF1 (ENSLCRG00005010191)	glb1l (ENSLCRG00005010230)	ENSLCRG00005012252	ENSLCRG00005012717
Gilthead seabream	MODERN SPECIES	23	ENSSAUG00010027618	ENSSAUG00010027617	ercc1 (ENSSAUG00010027616)	prmt2 (ENSSAUG00010027615)	ENSSAUG00010027614	ENSSAUG00010027613	ENSSAUG00010027612	ENSSAUG00010027611	DIP2A (ENSSAUG00010027610)	ENSSAUG00010027609	hycc2 (ENSSAUG00010027608)	trpm2 (ENSSAUG00010027607)	MAP3K13 (ENSSAUG00010027605)	PFKL (ENSSAUG00010027515)	TMEM169 (ENSSAUG00010027458) #21	xrcc5 (ENSSAUG00010027408) #22	ENSSAUG00010027394	MARCHF4 (ENSSAUG00010027393) #23	SMARCAL1 (ENSSAUG00010027379) #25	nme9 (ENSSAUG00010027377)	zgc:162707 (ENSSAUG00010027376)	ehhadh (ENSSAUG00010027375)	tmem41aa (ENSSAUG00010027374)	igf2bp2a (ENSSAUG00010027330)	tra2b (ENSSAUG00010027319)	ENSSAUG00010027315	ENSSAUG00010027313	ANKZF1 (ENSSAUG00010027309)	glb1l (ENSSAUG00010027170)	ENSSAUG00010026994	ENSSAUG00010026927
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000019607	ENSMAMG00000019630	ENSMAMG00000019642	ENSMAMG00000019648	ENSMAMG00000019670	ENSMAMG00000019693	ENSMAMG00000025846	ENSMAMG00000019704	ENSMAMG00000019714	ENSMAMG00000019732	ENSMAMG00000019834	ENSMAMG00000019843	trpm2 (ENSMAMG00000000410)	ENSMAMG00000000542	ENSMAMG00000000621	xrcc5 (ENSMAMG00000000708) #22	ENSMAMG00000000735	ENSMAMG00000000772	ENSMAMG00000000791	ENSMAMG00000000828 #25	nme9 (ENSMAMG00000000849)	zgc:162707 (ENSMAMG00000025518)	ehhadh (ENSMAMG00000000910)	tmem41aa (ENSMAMG00000000927)	igf2bp2a (ENSMAMG00000000969)	tra2b (ENSMAMG00000001051)	ENSMAMG00000001075	ENSMAMG00000001094	ENSMAMG00000001160	glb1l (ENSMAMG00000001126)	ENSMAMG00000001186
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT01100000263556.a.a.q.d	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a	ENSGT00390000004977.d.a
Climbing perch	MODERN SPECIES	12	ENSATEG00000021258	ENSATEG00000029089	ENSATEG00000021181	ENSATEG00000021164	ENSATEG00000021156	ENSATEG00000028914	ENSATEG00000021143	ENSATEG00000021089	ENSATEG00000021072	ENSATEG00000021031	ENSATEG00000021006	ENSATEG00000020918	ENSATEG00000020870	ENSATEG00000020810	TMEM169 (ENSATEG00000020797) #21	xrcc5 (ENSATEG00000020733) #22	ENSATEG00000020687	MARCHF4 (ENSATEG00000020649) #23	SMARCAL1 (ENSATEG00000020624) #25	nme9 (ENSATEG00000020557)	ENSATEG00000029040	zgc:162707 (ENSATEG00000025802)	ehhadh (ENSATEG00000020518)	tmem41aa (ENSATEG00000020502)	igf2bp2a (ENSATEG00000020389)	tra2b (ENSATEG00000020354)	ENSATEG00000020337	ENSATEG00000020302	ENSATEG00000020278	glb1l (ENSATEG00000020221)	ENSATEG00000020110
Siamese fighting fish	MODERN SPECIES	11	snx4 (ENSBSLG00000016902)	ARSD (ENSBSLG00000016694)	ENSBSLG00000016662	ENSBSLG00000015588	ercc1 (ENSBSLG00000015472)	prmt2 (ENSBSLG00000015428)	ENSBSLG00000015389	ENSBSLG00000015374	ENSBSLG00000013487	ENSBSLG00000013077	hycc2 (ENSBSLG00000012192)	trpm2 (ENSBSLG00000011733)	MAP3K13 (ENSBSLG00000011289)	PFKL (ENSBSLG00000008466)	TMEM169 (ENSBSLG00000008220) #21	xrcc5 (ENSBSLG00000007922) #22	COL6A2 (ENSBSLG00000007732)	MARCHF4 (ENSBSLG00000007287) #23	SMARCAL1 (ENSBSLG00000006782) #25	nme9 (ENSBSLG00000006456)	zgc:162707 (ENSBSLG00000006279)	ehhadh (ENSBSLG00000005946)	tmem41aa (ENSBSLG00000005941)	igf2bp2a (ENSBSLG00000005124)	tra2b (ENSBSLG00000004950)	ENSBSLG00000004919	ENSBSLG00000026238	glb1l (ENSBSLG00000026206)	ANKZF1 (ENSBSLG00000026199)	ENSBSLG00000026166	ENSBSLG00000026160
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a.f
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000177459	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT01100000263521.b	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT01030000235116	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a.f
Yellowtail amberjack	MODERN SPECIES	2388														ENSSLDG00000007414	TMEM169 (ENSSLDG00000007402) #21	xrcc5 (ENSSLDG00000007353) #22	ENSSLDG00000007329	ENSSLDG00000007300	MARCHF4 (ENSSLDG00000007291) #23	SMARCAL1 (ENSSLDG00000007224) #25	nme9 (ENSSLDG00000007187)	zgc:162707 (ENSSLDG00000007170)	ehhadh (ENSSLDG00000007146)	tmem41aa (ENSSLDG00000007119)	igf2bp2a (ENSSLDG00000007046)	tra2b (ENSSLDG00000007005)	ENSSLDG00000006947	ENSSLDG00000006914	ANKZF1 (ENSSLDG00000006877)	glb1l (ENSSLDG00000006777)	ENSSLDG00000006737
Greater amberjack	MODERN SPECIES	21	ENSSDUG00000015061	ENSSDUG00000015101	ENSSDUG00000015372	ENSSDUG00000015485	ercc1 (ENSSDUG00000016794)	prmt2 (ENSSDUG00000016811)	ENSSDUG00000016828	ENSSDUG00000016836	DIP2A (ENSSDUG00000016872)	ENSSDUG00000017128	hycc2 (ENSSDUG00000017151)	trpm2 (ENSSDUG00000017210)	MAP3K13 (ENSSDUG00000017262)	PFKL (ENSSDUG00000017336)	TMEM169 (ENSSDUG00000017381) #21	xrcc5 (ENSSDUG00000017389) #22	COL6A2 (ENSSDUG00000017419)	MARCHF4 (ENSSDUG00000017455) #23	SMARCAL1 (ENSSDUG00000017470) #25	nme9 (ENSSDUG00000017498)	ENSSDUG00000017536	zgc:162707 (ENSSDUG00000017544)	ehhadh (ENSSDUG00000017550)	tmem41aa (ENSSDUG00000017558)	igf2bp2a (ENSSDUG00000017581)	tra2b (ENSSDUG00000017670)	ENSSDUG00000017678	ENSSDUG00000017705	ANKZF1 (ENSSDUG00000017724)	glb1l (ENSSDUG00000017744)	ENSSDUG00000017812
Barramundi perch	MODERN SPECIES	142	grtp1b (ENSLCAG00010023511)	lamp1b (ENSLCAG00010023514)	ENSLCAG00010023516	pou2f1b (ENSLCAG00010023521)	ENSLCAG00010023532	ildr2 (ENSLCAG00010023539)	ildr1b (ENSLCAG00010023542)	me3 (ENSLCAG00010023581)	nxpe3 (ENSLCAG00010023641)	cep97 (ENSLCAG00010023653)	rpl24 (ENSLCAG00010023664)	mpc2b (ENSLCAG00010023666)	dcaf6 (ENSLCAG00010023701)	gpr161b (ENSLCAG00010023744)	OTC (ENSLCAG00010023748)	xrcc5 (ENSLCAG00010023762) #22	COL6A2 (ENSLCAG00010023774)	MARCHF4 (ENSLCAG00010023784) #23	SMARCAL1 (ENSLCAG00010023788) #25	nme9 (ENSLCAG00010023799)	zgc:162707 (ENSLCAG00010023808)	ehhadh (ENSLCAG00010023810)	tmem41aa (ENSLCAG00010023814)	igf2bp2a (ENSLCAG00010023821)	tra2b (ENSLCAG00010023836)	ENSLCAG00010023840	ENSLCAG00010023844	ANKZF1 (ENSLCAG00010023848)	ENSLCAG00010023852	glb1l (ENSLCAG00010023912)	ENSLCAG00010024031
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00930000151029.i.a	ENSGT00940000161140	ENSGT00940000159942.a.c.b	ENSGT00940000156607.a.b	ENSGT00390000011275	ENSGT00940000160683	ENSGT01100000263533.b.b.a.a.a.b.a	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412	ENSGT00940000154913	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000154856.A.a.d	ENSGT00390000005911	ENSGT00950000182942.a.b	ENSGT00940000164909.e.a.f	ENSGT00940000164909.e.a.e
Tongue sole	MODERN SPECIES	7	ofd1 (ENSCSEG00000010129)	gpm6bb (ENSCSEG00000010160)	glra2 (ENSCSEG00000010196)	ercc1 (ENSCSEG00000010206)	prmt2 (ENSCSEG00000010235)	ENSCSEG00000010264	ENSCSEG00000010280	DIP2A (ENSCSEG00000010300)	ENSCSEG00000010328	hycc2 (ENSCSEG00000010372)	ENSCSEG00000010405	ENSCSEG00000010429	MAP3K13 (ENSCSEG00000010489)	pfkl (ENSCSEG00000010541)	TMEM169 (ENSCSEG00000010669) #21	xrcc5 (ENSCSEG00000010680) #22	COL6A2 (ENSCSEG00000010759)	MARCHF4 (ENSCSEG00000010778) #23	SMARCAL1 (ENSCSEG00000010785) #25	nme9 (ENSCSEG00000010797)	rpe (ENSCSEG00000010822)	ackr3a (ENSCSEG00000010829)	ENSCSEG00000010833	ENSCSEG00000010837	vangl1 (ENSCSEG00000010842)	casq2 (ENSCSEG00000010861)	ENSCSEG00000010876	SLC5A3 (ENSCSEG00000010879)	DOP1B (ENSCSEG00000010882)	ENSCSEG00000010932	ENSCSEG00000010936
Turbot	MODERN SPECIES	5	ENSSMAG00000009473	ihha (ENSSMAG00000036550)	ENSSMAG00000009633	ENSSMAG00000009689	ENSSMAG00000009712	ENSSMAG00000009725	ENSSMAG00000009766	ENSSMAG00000009806	ENSSMAG00000009841	ENSSMAG00000028111	ENSSMAG00000010005	ENSSMAG00000010020	trpm2 (ENSSMAG00000010126)	ENSSMAG00000010180	ENSSMAG00000010223	xrcc5 (ENSSMAG00000010286) #22	ENSSMAG00000010326	MARCHF4 (ENSSMAG00000010382) #23	SMARCAL1 (ENSSMAG00000010427) #25	nme9 (ENSSMAG00000010453)	zgc:162707 (ENSSMAG00000010513)	ehhadh (ENSSMAG00000010530)	tmem41aa (ENSSMAG00000010541)	igf2bp2a (ENSSMAG00000010576)	tra2b (ENSSMAG00000010614)	ENSSMAG00000010627	ENSSMAG00000010640	glb1l (ENSSMAG00000010689)	ENSSMAG00000010739	ENSSMAG00000010851	ENSSMAG00000010862
Pinecone sodierfish	MODERN SPECIES	13	ARSD (ENSMMDG00005024067)	ENSMMDG00005024156	ENSMMDG00005024160	mab21l3 (ENSMMDG00005024164)	ercc1 (ENSMMDG00005024166)	prmt2 (ENSMMDG00005024170)	ENSMMDG00005002510	ENSMMDG00005002521	DIP2A (ENSMMDG00005002972)	ENSMMDG00005008769	hycc2 (ENSMMDG00005008777)	trpm2 (ENSMMDG00005009219)	MAP3K13 (ENSMMDG00005009367)	PFKL (ENSMMDG00005009446)	TMEM169 (ENSMMDG00005011183) #21	xrcc5 (ENSMMDG00005011217) #22	ENSMMDG00005011762	COL6A2 (ENSMMDG00005011763)	MARCHF4 (ENSMMDG00005011767) #23	SMARCAL1 (ENSMMDG00005011782) #25	ENSMMDG00005012370	nme9 (ENSMMDG00005012373)	zgc:162707 (ENSMMDG00005012376)	ehhadh (ENSMMDG00005012377)	tmem41aa (ENSMMDG00005012383)	igf2bp2a (ENSMMDG00005012390)	tra2b (ENSMMDG00005012404)	ENSMMDG00005012405	ENSMMDG00005012414	ANKZF1 (ENSMMDG00005012419)	glb1l (ENSMMDG00005012497)
Cod	MODERN SPECIES	12	ENSGMOG00000030992	ENSGMOG00000017606	ENSGMOG00000023701	ENSGMOG00000028059	ENSGMOG00000009496	ENSGMOG00000029329	ENSGMOG00000035105	trpm2 (ENSGMOG00000015349)	ENSGMOG00000035286	ENSGMOG00000011554	ENSGMOG00000023839	ENSGMOG00000024551	ENSGMOG00000014643	ENSGMOG00000023606	ENSGMOG00000034883 #21	xrcc5 (ENSGMOG00000014582) #22	ENSGMOG00000014528	ENSGMOG00000029514	ENSGMOG00000002281	ENSGMOG00000030938	ENSGMOG00000037051	cerkl (ENSGMOG00000014633)	neurod1 (ENSGMOG00000027437)	ENSGMOG00000032801	PDE1A (ENSGMOG00000009168)	frzb (ENSGMOG00000013868)	dnajc10 (ENSGMOG00000000883)	ENSGMOG00000024544	ENSGMOG00000026493	ENSGMOG00000003337	ENSGMOG00000030383
Protacanthopterygii	ANCESTRAL SPECIES	99	ENSGT00390000002862.tb	ENSGT00390000002862.ub	ENSGT00940000155953	ENSGT00950000182883.b.a.a	ENSGT00940000159677.a.b.w	ENSGT00940000160683	ENSGT00940000165332.B	ENSGT00940000164866	ENSGT00950000182997.a.b.b.a	ENSGT00530000064199	ENSGT00390000011295.a	ENSGT00940000156404	ENSGT00940000158216	ENSGT00940000159292	ENSGT00390000015276 #21	ENSGT00940000153239.A #22	ENSGT00940000155682.g.a	ENSGT00940000158179.b #23	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00940000158179.a #23	ENSGT00390000010672	ENSGT00390000006618	ENSGT00940000157516	ENSGT00940000163412.b	ENSGT00940000154913.p.a	ENSGT00950000183009.db.b	ENSGT00940000161051.a.a.a.a.a	ENSGT00940000161051.a.a.a.a.b	ENSGT00390000005911	ENSGT00950000182942.a.b
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153239.A #22
Salmoninae_a	ANCESTRAL SPECIES	198													ENSGT00940000155953.j	ENSGT00950000182883.b.a.a.g	ENSGT00390000011295.a	ENSGT00940000153239.A #22	ENSGT00940000156089.e.a.f	ENSGT00940000156089.f	ENSGT00940000156552.c.a.e	ENSGT00530000063873.B.g	ENSGT00940000156160.b.b	ENSGT00940000157916.g
Oncorhynchus	ANCESTRAL SPECIES	297														ENSGT00950000182883.b.a.a.g	ENSGT00390000011295.a	ENSGT00940000153239.A #22
Oncorhynchus_a	ANCESTRAL SPECIES	414														ENSGT00950000182883.b.a.a.g	ENSGT00390000011295.a	ENSGT00940000153239.A #22
Coho salmon	MODERN SPECIES	11	RAPH1 (ENSOKIG00005001687)	CTLA4 (ENSOKIG00005001718)	ENSOKIG00005001725	ABCB6 (ENSOKIG00005001749)	mnx2a (ENSOKIG00005001823)	ENSOKIG00005001828	ENSOKIG00005001842	ENSOKIG00005001848	ENSOKIG00005001852	NRP2 (ENSOKIG00005002047)	igf2bp2a (ENSOKIG00005002427)	ENSOKIG00005002524	ENSOKIG00005002535	NXPH2 (ENSOKIG00005002546)	HYCC2 (ENSOKIG00005002556)	xrcc5 (ENSOKIG00005002700) #22
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005001448	ENSOTSG00005001450	ENSOTSG00005001453	zgc:172295 (ENSOTSG00005001460)	ENSOTSG00005001463	serpine3 (ENSOTSG00005001464)	nup35 (ENSOTSG00005001467)	ENSOTSG00005001469	fgf16 (ENSOTSG00005001473)	fgf16 (ENSOTSG00005001475)	ENSOTSG00005001476	mnx2a (ENSOTSG00005001478)	ENSOTSG00005001481	ENSOTSG00005001483	ENSOTSG00005001489	xrcc5 (ENSOTSG00005001555) #22
Rainbow trout	MODERN SPECIES	21											ENSOMYG00000064435	ENSOMYG00000070267	ENSOMYG00000051139	ENSOMYG00000069255	ENSOMYG00000075218	xrcc5 (ENSOMYG00000001629) #22	ENSOMYG00000070173	ENSOMYG00000059990	ENSOMYG00000077002	ENSOMYG00000069980	ENSOMYG00000062590	SUMO3 (ENSOMYG00000057887)	ENSOMYG00000001527	ENSOMYG00000063418	ENSOMYG00000076555	ENSOMYG00000015001	abi2a (ENSOMYG00000071875)	ENSOMYG00000071606	ENSOMYG00000001378	ENSOMYG00000056154	ENSOMYG00000074984
Salmo	ANCESTRAL SPECIES	60													ENSGT00940000155953.j	ENSGT00950000182883.b.a.a.g	ENSGT00390000011295.a	ENSGT00940000153239.A #22	ENSGT00940000164909.e.a.m	ENSGT00940000164964.b	ENSGT00940000156449.a.d	ENSGT00940000163520.A.a.a.b.f	ENSGT00980000199396.a	ENSGT00940000156089.e.a.f	ENSGT00940000156089.f	ENSGT00940000156552.c.a.e	ENSGT00940000178309.b	ENSGT00530000063873.B.g	ENSGT00940000156160.b.b	ENSGT00940000157916.g	ENSGT00940000166348	ENSGT00940000160059.a.b.b.a	ENSGT00950000183165.b.a.e.b.d.a.b
River trout	MODERN SPECIES	16											spoplb (ENSSTUG00000010901)	NXPH2 (ENSSTUG00000010889)	ENSSTUG00000010879	ENSSTUG00000010874	hycc2 (ENSSTUG00000010632)	xrcc5 (ENSSTUG00000010206) #22	ENSSTUG00000010186	igf2bp2a (ENSSTUG00000010052)	ENSSTUG00000010031	ENSSTUG00000006604	sumo3a (ENSSTUG00000006502)	ENSSTUG00000006477	bmpr2b (ENSSTUG00000006363)	cbln6 (ENSSTUG00000006354)	ENSSTUG00000006350	RAPH1 (ENSSTUG00000006337)	ENSSTUG00000006325	ENSSTUG00000006300	ABCB6 (ENSSTUG00000005724)	ENSSTUG00000005689	ENSSTUG00000005675
Atlantic salmon	MODERN SPECIES	17												ENSSSAG00000086144	ENSSSAG00000093415	ENSSSAG00000099444	ENSSSAG00000041238	ENSSSAG00000097596 #22	ENSSSAG00000113095	ENSSSAG00000083408	ENSSSAG00000087915	bmpr2b (ENSSSAG00000122021)	ENSSSAG00000103937	ENSSSAG00000094760	sumo3 (ENSSSAG00000041220)	ENSSSAG00000096864	ENSSSAG00000119572	ENSSSAG00000092405	ENSSSAG00000086430	ENSSSAG00000084688	ENSSSAG00000107570	ENSSSAG00000113315	ENSSSAG00000101504
Huchen	MODERN SPECIES	9190																ENSHHUG00000006511 #22
Northern pike	MODERN SPECIES	19	ENSELUG00000030962	ENSELUG00000032432	ENSELUG00000009504	hycc2 (ENSELUG00000009489)	trpm2 (ENSELUG00000009466)	ENSELUG00000026929	ENSELUG00000021765	ENSELUG00000010075	ENSELUG00000010086	ENSELUG00000026676	ENSELUG00000010093	ENSELUG00000031578	MAP3K13 (ENSELUG00000010167)	PFKL (ENSELUG00000010230)	TMEM169 (ENSELUG00000010252) #21	xrcc5 (ENSELUG00000001093) #22	COL6A2 (ENSELUG00000010387)	MARCHF9 (ENSELUG00000010413)	ENSELUG00000010440 #25	nme9 (ENSELUG00000010559)	ENSELUG00000010491	ENSELUG00000029425	zgc:162707 (ENSELUG00000025175)	ehhadh (ENSELUG00000010632)	tmem41aa (ENSELUG00000010646)	igf2bp2a (ENSELUG00000010676)	tra2b (ENSELUG00000010705)	ENSELUG00000010731	ENSELUG00000010749	ANKZF1 (ENSELUG00000010785)	glb1l (ENSELUG00000010822)
Osteoglossiformes	ANCESTRAL SPECIES	413																ENSGT00940000153239.A #22	ENSGT00390000018786	ENSGT00940000155682.g.b	ENSGT00940000162889.b	ENSGT00940000157608 #25	ENSGT00940000164537	ENSGT00390000010672	ENSGT00940000157516	ENSGT00940000162528	ENSGT00950000183009.db.a
Asian bonytongue	MODERN SPECIES	3	tfpia (ENSSFOG00015014641)	GULP1 (ENSSFOG00015014580)	COL5A2 (ENSSFOG00015014497)	PJVK (ENSSFOG00015014463)	fkbp7 (ENSSFOG00015027461)	plekha3 (ENSSFOG00015014427)	ENSSFOG00015014419	ENSSFOG00015014123	ENSSFOG00015032538	ENSSFOG00015027832	ENSSFOG00015013909	prmt2 (ENSSFOG00015013865)	ENSSFOG00015013824	PFKL (ENSSFOG00015013773)	ENSSFOG00015013761 ##26	xrcc5 (ENSSFOG00015013724) #22	zgc:162816 (ENSSFOG00015013697)	COL6A2 (ENSSFOG00015013569)	COL6A1 (ENSSFOG00015013459)	SMARCAL1 (ENSSFOG00015013429) #25	nme9 (ENSSFOG00015013368)	vps8 (ENSSFOG00015013264)	ehhadh (ENSSFOG00015013128)	tmem41ab (ENSSFOG00015032627)	TRA2B (ENSSFOG00015013018)	ENSSFOG00015012752	ENSSFOG00015012581	ENSSFOG00015029987	ENSSFOG00015012446	HOXD8 (ENSSFOG00015026967)	mtx2 (ENSSFOG00015012353)
P. kingsleyae	MODERN SPECIES	897																xrcc5 (ENSPKIG00000006477) #22	zgc:162816 (ENSPKIG00000006433)
Spotted gar	MODERN SPECIES	650	ENSLOCG00000017838	ENSLOCG00000009909	ENSLOCG00000009880	cflara (ENSLOCG00000009863)	ndufb3 (ENSLOCG00000009855)	HYCC2 (ENSLOCG00000009846)	ORC2 (ENSLOCG00000009832)	CFAP410 (ENSLOCG00000009819)	trpm2 (ENSLOCG00000009806)	MAP3K13 (ENSLOCG00000009793)	pfklb (ENSLOCG00000009776)	ENSLOCG00000009771	ENSLOCG00000009762 ##26	pecr (ENSLOCG00000009750) #20	tmem169a (ENSLOCG00000009744) #21	xrcc5 (ENSLOCG00000009725) #22	zgc:162816 (ENSLOCG00000009716)	COL6A2 (ENSLOCG00000009684)	COL6A1 (ENSLOCG00000009665)	marchf4l (ENSLOCG00000009654) #23	SMARCAL1 (ENSLOCG00000009637) #25	nme9 (ENSLOCG00000009626)	vps8 (ENSLOCG00000009601)	zgc:162707 (ENSLOCG00000009596)	ehhadh (ENSLOCG00000009587)	tmem41ab (ENSLOCG00000009578)	igf2bp2b (ENSLOCG00000009564)	ENSLOCG00000009558	ENSLOCG00000009546	zgc:112416 (ENSLOCG00000009535)	pcnt (ENSLOCG00000009517)
Reedfish	MODERN SPECIES	16	ENSECRG00000007245	ENSECRG00000007260	ENSECRG00000007271	ENSECRG00000007280	ENSECRG00000007290	ENSECRG00000007305	ENSECRG00000007316	ENSECRG00000007322	ENSECRG00000007328	ENSECRG00000007341	ENSECRG00000007350	pecr (ENSECRG00000007364) #20	atg9a (ENSECRG00000007385)	ENSECRG00000007419 ##26	tmem169a (ENSECRG00000007428) #21	xrcc5 (ENSECRG00000007441) #22	marchf4l (ENSECRG00000007470) #23	SMARCAL1 (ENSECRG00000007504) #25	nme9 (ENSECRG00000007549)	ENSECRG00000007596	ENSECRG00000007604	ENSECRG00000007613	ENSECRG00000007625	vps8 (ENSECRG00000007666)	zgc:162707 (ENSECRG00000007736)	ehhadh (ENSECRG00000007747)	tmem41ab (ENSECRG00000007758)	igf2bp2b (ENSECRG00000007792)	ENSECRG00000007849	tra2b (ENSECRG00000007859)	ENSECRG00000014067
Elephant shark	MODERN SPECIES	1773						ENSCMIG00000015757	CFAP65 (ENSCMIG00000015768)	ENSCMIG00000015785	stk16 (ENSCMIG00000015788)	ENSCMIG00000015808	ENSCMIG00000015908	ENSCMIG00000015997	ENSCMIG00000016019	ENSCMIG00000016022	tmem169a (ENSCMIG00000016028) #21	xrcc5 (ENSCMIG00000016052) #22	marchf4l (ENSCMIG00000016108) #23	zgc:171772 (ENSCMIG00000016111) #26	ENSCMIG00000016115 #25	retreg2 (ENSCMIG00000016117)	ENSCMIG00000016121	ENSCMIG00000016124