Euteleostomi	ANCESTRAL SPECIES	75								ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000158987	ENSGT00940000161632	ENSGT00940000165729	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b	ENSGT00390000001289.b.a	ENSGT00940000160861
Sarcopterygii	ANCESTRAL SPECIES	105		ENSGT00940000160294	ENSGT00940000154783	ENSGT00390000012647	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000158987	ENSGT00940000161632	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b	ENSGT00390000001289.b.a	ENSGT00940000160861	ENSGT00940000164465
Tetrapoda	ANCESTRAL SPECIES	170		ENSGT00940000160294	ENSGT00940000154783	ENSGT00390000012647	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22
Amniota	ANCESTRAL SPECIES	48	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00940000159460	ENSGT00940000156656	ENSGT00940000165959	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863
Mammalia	ANCESTRAL SPECIES	54	ENSGT00530000063624.B	ENSGT00390000005569.x	ENSGT00390000005569.w.a	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000159460	ENSGT00940000156656	ENSGT00940000165959	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27
Theria	ANCESTRAL SPECIES	34	ENSGT00960000187040	ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j #32	ENSGT01100000263574.b.i.b ##32	ENSGT01100000263574.b.i.a ##32	ENSGT00940000157904 #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37
Eutheria	ANCESTRAL SPECIES	16	ENSGT00940000158743	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b
Primates	ANCESTRAL SPECIES	23	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT01100000263574.b.i.b ##32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Haplorrhini	ANCESTRAL SPECIES	31	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Hominoidea	ANCESTRAL SPECIES	16	ENSGT00940000161768.A.o #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000161768.A.o #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000161543.f #14	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000161543.f #14	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.c.a #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Pan	ANCESTRAL SPECIES	6	ENSGT00940000161768.A.o #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000161543.f #14	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000006028 #17	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.c.a #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36	ENSGT00940000157245 #37
Chimpanzee	MODERN SPECIES	972	TEX13D (ENSPTRG00000046826) #7	SH2D1A (ENSPTRG00000022249) #8	TENM1 (ENSPTRG00000022250) #9	ENSPTRG00000044021 #10	DCAF12L1 (ENSPTRG00000043960) #11	PRR32 (ENSPTRG00000028204) #12	ACTRT1 (ENSPTRG00000022254) #13	ENSPTRG00000045509 #14	SMARCA1 (ENSPTRG00000049876) #15	OCRL (ENSPTRG00000022257) #16	ENSPTRG00000050350 #17	XPNPEP2 (ENSPTRG00000022259) #18	SASH3 (ENSPTRG00000022934) #19	ZDHHC9 (ENSPTRG00000052796) #20	UTP14A (ENSPTRG00000022262) #21	BCORL1 (ENSPTRG00000049216) #22	ELF4 (ENSPTRG00000050157) #23	AIFM1 (ENSPTRG00000022265) #24	ZNF280C (ENSPTRG00000050457) #25	SLC25A14 (ENSPTRG00000022268) #26	GPR119 (ENSPTRG00000023895) #27	RBMX2 (ENSPTRG00000022269) #28	ENOX2 (ENSPTRG00000022270) #29	ARHGAP36 (ENSPTRG00000022271) #30	IGSF1 (ENSPTRG00000022273) #31	OR13H1 (ENSPTRG00000022275) #32	ENSPTRG00000039845 #33	STK26 (ENSPTRG00000022277) #34	FRMD7 (ENSPTRG00000022278) #35	ENSPTRG00000045097 #36	ENSPTRG00000045178 #37
Bonobo	MODERN SPECIES	369	XIAP (ENSPPAG00000028997)	STAG2 (ENSPPAG00000039185)	SH2D1A (ENSPPAG00000039552) #8	TENM1 (ENSPPAG00000017669) #9	ENSPPAG00000041712	DCAF12L1 (ENSPPAG00000025645) #11	ACTRT1 (ENSPPAG00000025831) #13	ENSPPAG00000001022 #14	SMARCA1 (ENSPPAG00000034647) #15	OCRL (ENSPPAG00000022524) #16	ENSPPAG00000001287 #17	XPNPEP2 (ENSPPAG00000016516) #18	SASH3 (ENSPPAG00000036392) #19	ZDHHC9 (ENSPPAG00000038981) #20	UTP14A (ENSPPAG00000042440) #21	BCORL1 (ENSPPAG00000040847) #22	ELF4 (ENSPPAG00000043203) #23	AIFM1 (ENSPPAG00000032488) #24	RAB33A (ENSPPAG00000038245)	ZNF280C (ENSPPAG00000025921) #25	ENSPPAG00000031152 #26	GPR119 (ENSPPAG00000015098) #27	RBMX2 (ENSPPAG00000042194) #28	ENOX2 (ENSPPAG00000040291) #29	ARHGAP36 (ENSPPAG00000027526) #30	IGSF1 (ENSPPAG00000039617) #31	OR13H1 (ENSPPAG00000001219) #32	STK26 (ENSPPAG00000036157) #34	FRMD7 (ENSPPAG00000020202) #35	ENSPPAG00000016682 #36	RAP2C (ENSPPAG00000038206) #37
Human	MODERN SPECIES	1827	SH2D1A (ENSG00000183918) #8	TEX13D (ENSG00000282419) #7	TENM1 (ENSG00000009694) #9	TEX13C (ENSG00000282815) ##7	DCAF12L2 (ENSG00000198354) #10	DCAF12L1 (ENSG00000198889) #11	PRR32 (ENSG00000183631) #12	ACTRT1 (ENSG00000123165) #13	SMARCA1 (ENSG00000102038) #15	OCRL (ENSG00000122126) #16	APLN (ENSG00000171388)	XPNPEP2 (ENSG00000122121) #18	SASH3 (ENSG00000122122) #19	ZDHHC9 (ENSG00000188706) #20	UTP14A (ENSG00000156697) #21	BCORL1 (ENSG00000085185) #22	ELF4 (ENSG00000102034) #23	AIFM1 (ENSG00000156709) #24	RAB33A (ENSG00000134594)	ZNF280C (ENSG00000056277) #25	SLC25A14 (ENSG00000102078) ##26	GPR119 (ENSG00000147262) #27	RBMX2 (ENSG00000134597) #28	ENOX2 (ENSG00000165675) #29	ARHGAP36 (ENSG00000147256) #30	IGSF1 (ENSG00000147255) #31	OR13H1 (ENSG00000171054) #32	STK26 (ENSG00000134602) #34	FRMD7 (ENSG00000165694) #35	RAP2C (ENSG00000123728) #37	MBNL3 (ENSG00000076770)
Gorilla	MODERN SPECIES	523	SH2D1A (ENSGGOG00000034950) #8	TENM1 (ENSGGOG00000003488) #9	ENSGGOG00000039541	DCAF12L2 (ENSGGOG00000005923) #10	DCAF12L1 (ENSGGOG00000016198) #11	PRR32 (ENSGGOG00000022006) #12	ACTRT1 (ENSGGOG00000015345) #13	ENSGGOG00000041367 #14	ENSGGOG00000012841 #15	OCRL (ENSGGOG00000000824) #16	APLN (ENSGGOG00000040354)	XPNPEP2 (ENSGGOG00000015184) #18	SASH3 (ENSGGOG00000015197) #19	ZDHHC9 (ENSGGOG00000015203) #20	UTP14A (ENSGGOG00000014930) #21	BCORL1 (ENSGGOG00000014356) #22	ELF4 (ENSGGOG00000015859) #23	AIFM1 (ENSGGOG00000007635) #24	RAB33A (ENSGGOG00000023435)	ZNF280C (ENSGGOG00000026605) #25	SLC25A14 (ENSGGOG00000005319) ##26	GPR119 (ENSGGOG00000028324) #27	RBMX2 (ENSGGOG00000023687) #28	ENOX2 (ENSGGOG00000007569) #29	ARHGAP36 (ENSGGOG00000001605) #30	IGSF1 (ENSGGOG00000008773) #31	ENSGGOG00000044042	ENSGGOG00000037571 #33	STK26 (ENSGGOG00000013339) #34	FRMD7 (ENSGGOG00000008350) #35	ENSGGOG00000040637 #36
Orangutan	MODERN SPECIES	242	SH2D1A (ENSPPYG00000020698) #8	TENM1 (ENSPPYG00000020699) #9	ENSPPYG00000031077 ##7	DCAF12L2 (ENSPPYG00000037362) #10	DCAF12L1 (ENSPPYG00000037034) #11	PRR32 (ENSPPYG00000020701) #12	ACTRT1 (ENSPPYG00000020702) #13	SMARCA1 (ENSPPYG00000020703) #15	OCRL (ENSPPYG00000020704) #16	ENSPPYG00000041441	APLN (ENSPPYG00000020705)	XPNPEP2 (ENSPPYG00000020706) #18	SASH3 (ENSPPYG00000020707) #19	ZDHHC9 (ENSPPYG00000020708) #20	UTP14A (ENSPPYG00000020709) #21	BCORL1 (ENSPPYG00000020710) #22	ELF4 (ENSPPYG00000020711) #23	AIFM1 (ENSPPYG00000020712) #24	RAB33A (ENSPPYG00000020713)	ZNF280C (ENSPPYG00000020714) #25	SLC25A14 (ENSPPYG00000020715) ##26	GPR119 (ENSPPYG00000020716) #27	RBMX2 (ENSPPYG00000020717) #28	ENOX2 (ENSPPYG00000020718) #29	ARHGAP36 (ENSPPYG00000020719) #30	IGSF1 (ENSPPYG00000020720) #31	STK26 (ENSPPYG00000020722) #34	FRMD7 (ENSPPYG00000020723) #35	RAP2C (ENSPPYG00000034792) #37	MBNL3 (ENSPPYG00000020726)	HS6ST2 (ENSPPYG00000020727)
Gibbon	MODERN SPECIES	449	SH2D1A (ENSNLEG00000015129) #8	TENM1 (ENSNLEG00000015132) #9	ENSNLEG00000015174	ENSNLEG00000030015	ENSNLEG00000030396	DCAF12L1 (ENSNLEG00000015176) #11	PRR32 (ENSNLEG00000030417) #12	ENSNLEG00000035461 #14	SMARCA1 (ENSNLEG00000015179) #15	OCRL (ENSNLEG00000015200) #16	ENSNLEG00000033924 #17	XPNPEP2 (ENSNLEG00000015227) #18	SASH3 (ENSNLEG00000015232) #19	ZDHHC9 (ENSNLEG00000015242) #20	UTP14A (ENSNLEG00000015258) #21	BCORL1 (ENSNLEG00000015275) #22	ENSNLEG00000015279 #23	AIFM1 (ENSNLEG00000015284) #24	RAB33A (ENSNLEG00000034919)	ZNF280C (ENSNLEG00000015312) #25	SLC25A14 (ENSNLEG00000015318) ##26	GPR119 (ENSNLEG00000018337) #27	RBMX2 (ENSNLEG00000015325) #28	ENOX2 (ENSNLEG00000015328) #29	ARHGAP36 (ENSNLEG00000015337) #30	IGSF1 (ENSNLEG00000015346) #31	ENSNLEG00000031813 #33	STK26 (ENSNLEG00000001491) #34	FRMD7 (ENSNLEG00000001688) #35	ENSNLEG00000031013 #36	ENSNLEG00000033595 #37
Cercopithecidae	ANCESTRAL SPECIES	19	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000154961.c.b #36
Cercopithecinae	ANCESTRAL SPECIES	13	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00390000017491.s.a.a.b	ENSGT00530000065055 #33	ENSGT00940000157904.d #34
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00390000017491.s.a.a.b	ENSGT00530000065055 #33	ENSGT00940000157904.d #34
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000006350.m.b.b	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00390000013354.d.a.b.a.a.b	ENSGT00940000161543.f #14	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i.a #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00390000017491.s.a.a.b	ENSGT00530000065055 #33	ENSGT00940000157904.d #34
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000006350.m.b.b	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00390000013354.d.a.b.a.a.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000006028 #17	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i.a #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00390000017491.s.a.a.b	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a
Rhesus	MODERN SPECIES	327	ENSMMUG00000038252	PRR32 (ENSMMUG00000017464) #12	ACTRT1 (ENSMMUG00000019612) #13	ENSMMUG00000064685	ENSMMUG00000049693	ENSMMUG00000056630	ENSMMUG00000050039	ENSMMUG00000062829	SMARCA1 (ENSMMUG00000008818) #15	OCRL (ENSMMUG00000008825) #16	ENSMMUG00000059153 #17	XPNPEP2 (ENSMMUG00000011474) #18	SASH3 (ENSMMUG00000020695) #19	ZDHHC9 (ENSMMUG00000020699) #20	UTP14A (ENSMMUG00000020700) #21	BCORL1 (ENSMMUG00000008781) #22	ELF4 (ENSMMUG00000008785) #23	AIFM1 (ENSMMUG00000004954) #24	RAB33A (ENSMMUG00000049309)	ZNF280C (ENSMMUG00000015609) #25	SLC25A14 (ENSMMUG00000008386) ##26	GPR119 (ENSMMUG00000008388) #27	RBMX2 (ENSMMUG00000008389) #28	ENSMMUG00000047665	ENOX2 (ENSMMUG00000013162) #29	ENSMMUG00000062750	ARHGAP36 (ENSMMUG00000011154) #30	IGSF1 (ENSMMUG00000011152) #31	STK26 (ENSMMUG00000003475) #34	FRMD7 (ENSMMUG00000003479) #35	RAP2C (ENSMMUG00000048745) #37
Crab-eating macaque	MODERN SPECIES	175	ENSMFAG00000064252	ENSMFAG00000052275	ENSMFAG00000057717	ENSMFAG00000054354	ACTRT1 (ENSMFAG00000014519) #13	ENSMFAG00000003871	ENSMFAG00000063233	SMARCA1 (ENSMFAG00000002117) #15	OCRL (ENSMFAG00000033457) #16	ENSMFAG00000040963 #17	XPNPEP2 (ENSMFAG00000040935) #18	SASH3 (ENSMFAG00000030935) #19	ZDHHC9 (ENSMFAG00000003427) #20	ENSMFAG00000053640 #21	ENSMFAG00000032552 #21	BCORL1 (ENSMFAG00000032757) #22	ELF4 (ENSMFAG00000000961) #23	AIFM1 (ENSMFAG00000000275) #24	RAB33A (ENSMFAG00000002604)	ZNF280C (ENSMFAG00000042147) #25	SLC25A14 (ENSMFAG00000032347) ##26	GPR119 (ENSMFAG00000016138) #27	RBMX2 (ENSMFAG00000041017) #28	ENOX2 (ENSMFAG00000003196) #29	ARHGAP36 (ENSMFAG00000042270) #30	ENSMFAG00000052784	ENSMFAG00000060182	IGSF1 (ENSMFAG00000033363) #31	ENSMFAG00000026839	STK26 (ENSMFAG00000039094) #34	FRMD7 (ENSMFAG00000036359) #35
Pig-tailed macaque	MODERN SPECIES	419	TEX13C (ENSMNEG00000037340) ##7	DCAF12L2 (ENSMNEG00000026496) #10	DCAF12L1 (ENSMNEG00000020052) #11	ENSMNEG00000005648	PRR32 (ENSMNEG00000028118) #12	ACTRT1 (ENSMNEG00000021005) #13	ENSMNEG00000039781	ENSMNEG00000029813 #14	SMARCA1 (ENSMNEG00000041768) #15	OCRL (ENSMNEG00000039517) #16	APLN (ENSMNEG00000025745)	XPNPEP2 (ENSMNEG00000011460) #18	SASH3 (ENSMNEG00000025559) #19	ZDHHC9 (ENSMNEG00000034484) #20	UTP14A (ENSMNEG00000038730) #21	BCORL1 (ENSMNEG00000030847) #22	ELF4 (ENSMNEG00000042904) #23	ENSMNEG00000022321	WASHC5 (ENSMNEG00000027732)	SQLE (ENSMNEG00000038543)	ZNF572 (ENSMNEG00000044566)	MTSS1 (ENSMNEG00000029086)	NDUFB9 (ENSMNEG00000038946)	TATDN1 (ENSMNEG00000044367)	RNF139 (ENSMNEG00000043580)	ENSMNEG00000035764	TMEM65 (ENSMNEG00000043831)	FER1L6 (ENSMNEG00000027977)	FAM91A1 (ENSMNEG00000031470)	ANXA13 (ENSMNEG00000045289)	KLHL38 (ENSMNEG00000036823)
Cercopithecinae_b	ANCESTRAL SPECIES	48	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00390000017491.s.a.a.b	ENSGT00530000065055 #33	ENSGT00940000157904.d #34
Cercopithecinae_d	ANCESTRAL SPECIES	113	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000154612.n.fb.b	ENSGT00390000013354.d.a.b.a.a.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00390000017491.s.a.a.b	ENSGT00530000065055 #33	ENSGT00940000157904.d #34
Sooty mangabey	MODERN SPECIES	655	SH2D1A (ENSCATG00000013291) #8	TENM1 (ENSCATG00000010260) #9	DCAF12L2 (ENSCATG00000018014) #10	DCAF12L1 (ENSCATG00000022780) #11	PRR32 (ENSCATG00000037226) #12	ACTRT1 (ENSCATG00000018422) #13	ENSCATG00000033747	ENSCATG00000031968	SMARCA1 (ENSCATG00000015921) #15	OCRL (ENSCATG00000037629) #16	ENSCATG00000035939 #17	XPNPEP2 (ENSCATG00000015884) #18	SASH3 (ENSCATG00000033233) #19	ZDHHC9 (ENSCATG00000031943) #20	UTP14A (ENSCATG00000036177) #21	BCORL1 (ENSCATG00000043754) #22	ELF4 (ENSCATG00000040961) #23	AIFM1 (ENSCATG00000022862) #24	RAB33A (ENSCATG00000022275)	ZNF280C (ENSCATG00000034249) #25	SLC25A14 (ENSCATG00000031781) ##26	GPR119 (ENSCATG00000017992) #27	RBMX2 (ENSCATG00000005967) #28	ENSCATG00000038513	ENSCATG00000014829	ENSCATG00000029675 #29	ARHGAP36 (ENSCATG00000038982) #30	IGSF1 (ENSCATG00000041281) #31	ENSCATG00000018658	ENSCATG00000045225 #33	STK26 (ENSCATG00000036030) #34
Drill	MODERN SPECIES	990									SMARCA1 (ENSMLEG00000043198) #15	OCRL (ENSMLEG00000033019) #16	APLN (ENSMLEG00000028916)	XPNPEP2 (ENSMLEG00000031731) #18	SASH3 (ENSMLEG00000041071) #19	ZDHHC9 (ENSMLEG00000034629) #20	UTP14A (ENSMLEG00000029914) #21	BCORL1 (ENSMLEG00000034556) #22	ELF4 (ENSMLEG00000043693) #23	AIFM1 (ENSMLEG00000005515) #24	RAB33A (ENSMLEG00000031891)	ZNF280C (ENSMLEG00000035334) #25	SLC25A14 (ENSMLEG00000041370) ##26	GPR119 (ENSMLEG00000001877) #27	RBMX2 (ENSMLEG00000028723) #28	ENSMLEG00000028677	ENSMLEG00000041648	ENOX2 (ENSMLEG00000041679) #29	ARHGAP36 (ENSMLEG00000038280) #30	IGSF1 (ENSMLEG00000035309) #31	OR13H1 (ENSMLEG00000007839) #32	STK26 (ENSMLEG00000036304) #34	FRMD7 (ENSMLEG00000031582) #35
Olive baboon	MODERN SPECIES	792	SH2D1A (ENSPANG00000001186) #8	TENM1 (ENSPANG00000002300) #9	TEX13C (ENSPANG00000029900) ##7	ENSPANG00000048415	ENSPANG00000038760	DCAF12L1 (ENSPANG00000015250) #11	PRR32 (ENSPANG00000014924) #12	SMARCA1 (ENSPANG00000003871) #15	OCRL (ENSPANG00000026248) #16	ENSPANG00000041947 #17	ENSPANG00000043668	XPNPEP2 (ENSPANG00000008086) #18	SASH3 (ENSPANG00000010795) #19	ZDHHC9 (ENSPANG00000019559) #20	UTP14A (ENSPANG00000010948) #21	BCORL1 (ENSPANG00000007809) #22	ELF4 (ENSPANG00000011469) #23	AIFM1 (ENSPANG00000012508) #24	RAB33A (ENSPANG00000006808)	ZNF280C (ENSPANG00000002927) #25	ENSPANG00000037702	SLC25A14 (ENSPANG00000014923) ##26	GPR119 (ENSPANG00000020658) #27	ENSPANG00000041273	RBMX2 (ENSPANG00000021545) #28	ENSPANG00000036177	ENSPANG00000039700	ENSPANG00000019285	ENSPANG00000047373	ENOX2 (ENSPANG00000006807) #29	ENSPANG00000039525
Vervet Monkey	MODERN SPECIES	203	HTR2C (ENSCSAG00000008651)	IL13RA2 (ENSCSAG00000008610)	ENSCSAG00000008574	LRCH2 (ENSCSAG00000008554)	ENSCSAG00000008478	ENSCSAG00000008465	ACTRT1 (ENSCSAG00000000304) #13	ENSCSAG00000000303	SMARCA1 (ENSCSAG00000008460) #15	OCRL (ENSCSAG00000008407) #16	APLN (ENSCSAG00000008386)	XPNPEP2 (ENSCSAG00000008350) #18	SASH3 (ENSCSAG00000008257) #19	ZDHHC9 (ENSCSAG00000008247) #20	UTP14A (ENSCSAG00000008164) #21	BCORL1 (ENSCSAG00000008013) #22	ELF4 (ENSCSAG00000008005) #23	AIFM1 (ENSCSAG00000008001) #24	RAB33A (ENSCSAG00000007992)	ZNF280C (ENSCSAG00000007990) #25	SLC25A14 (ENSCSAG00000007957) ##26	GPR119 (ENSCSAG00000000302) #27	RBMX2 (ENSCSAG00000007947) #28	ENSCSAG00000007929	ENOX2 (ENSCSAG00000007886) #29	ARHGAP36 (ENSCSAG00000007868) #30	IGSF1 (ENSCSAG00000007858) #31	OR13H1 (ENSCSAG00000007849) #32	ENSCSAG00000000301	STK26 (ENSCSAG00000007843) #34	FRMD7 (ENSCSAG00000007834) #35
Rhinopithecus	ANCESTRAL SPECIES	333									ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.a.a #28	ENSGT00940000153336.e.a.a.b
Golden snub-nosed monkey	MODERN SPECIES	2964								SMARCA1 (ENSRROG00000034167) #15	OCRL (ENSRROG00000042261) #16	APLN (ENSRROG00000044795)	XPNPEP2 (ENSRROG00000028111) #18	SASH3 (ENSRROG00000029567) #19	ZDHHC9 (ENSRROG00000041080) #20	ENSRROG00000040987	UTP14A (ENSRROG00000028678) #21	BCORL1 (ENSRROG00000034710) #22	ELF4 (ENSRROG00000033352) #23	AIFM1 (ENSRROG00000037260) #24	RAB33A (ENSRROG00000029829)	ZNF280C (ENSRROG00000025269) #25	SLC25A14 (ENSRROG00000039330) ##26	GPR119 (ENSRROG00000021564) #27	RBMX2 (ENSRROG00000044360) #28	ENSRROG00000045254	ENOX2 (ENSRROG00000037888) #29
Black snub-nosed monkey	MODERN SPECIES	666															UTP14A (ENSRBIG00000038670) #21	BCORL1 (ENSRBIG00000041606) #22	ELF4 (ENSRBIG00000044327) #23
Platyrrhini	ANCESTRAL SPECIES	41	ENSGT00950000182805.a.a.a.b.i.a	ENSGT00390000006051.a.b.a.b.o.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000163379.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b	ENSGT01050000244897.a.b.a
Cebidae	ANCESTRAL SPECIES	27	ENSGT00950000182805.a.a.a.b.i.a	ENSGT00390000006051.a.b.a.b.o.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000163379.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b	ENSGT01050000244897.a.b.a
Marmoset	MODERN SPECIES	78	SH2D1A (ENSCJAG00000077252) #8	TENM1 (ENSCJAG00000020589) #9	TEX13C (ENSCJAG00000040019) ##7	PRR32 (ENSCJAG00000002938) #12	ENSCJAG00000087225 #13	ENSCJAG00000085274 #13	ENSCJAG00000086881	ENSCJAG00000074249	SMARCA1 (ENSCJAG00000002868) #15	OCRL (ENSCJAG00000002748) #16	ENSCJAG00000064548 #17	XPNPEP2 (ENSCJAG00000002719) #18	SASH3 (ENSCJAG00000002703) #19	ZDHHC9 (ENSCJAG00000002664) #20	UTP14A (ENSCJAG00000002637) #21	BCORL1 (ENSCJAG00000002614) #22	ELF4 (ENSCJAG00000002612) #23	ENSCJAG00000014132	AIFM1 (ENSCJAG00000002528) #24	RAB33A (ENSCJAG00000070720)	ZNF280C (ENSCJAG00000002491) #25	ENSCJAG00000084476	SLC25A14 (ENSCJAG00000002456) ##26	RBMX2 (ENSCJAG00000002436) #28	ENOX2 (ENSCJAG00000014408) #29	ENSCJAG00000071421	ARHGAP36 (ENSCJAG00000014442) #30	IGSF1 (ENSCJAG00000014463) #31	ENSCJAG00000077143	ENSCJAG00000081399 ##32	ENSCJAG00000084156
Cebidae_a	ANCESTRAL SPECIES	67	ENSGT00950000182972.a.a.a.a.a	ENSGT00950000182805.a.a.a.b.i.a	ENSGT00390000006051.a.b.a.b.o.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.p ##7	ENSGT00390000012726 #12	ENSGT00940000163379.b	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.i #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471.d ##26	ENSGT00890000139472.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000168565	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b
Capuchin	MODERN SPECIES	376								SMARCA1 (ENSCCAG00000030817) #15	OCRL (ENSCCAG00000010249) #16	APLN (ENSCCAG00000026149)	XPNPEP2 (ENSCCAG00000036408) #18	SASH3 (ENSCCAG00000036692) #19	ZDHHC9 (ENSCCAG00000021201) #20	ENSCCAG00000019807	UTP14A (ENSCCAG00000035074) #21	BCORL1 (ENSCCAG00000018301) #22	ELF4 (ENSCCAG00000024590) #23	AIFM1 (ENSCCAG00000032951) #24	RAB33A (ENSCCAG00000035680)	ZNF280C (ENSCCAG00000023882) #25	SLC25A14 (ENSCCAG00000022512) #26	ENSCCAG00000026471 #28	ENOX2 (ENSCCAG00000029178) #29	ARHGAP36 (ENSCCAG00000025663) #30	IGSF1 (ENSCCAG00000027315) #31	PRR20G (ENSCCAG00000020972)	TPRA1 (ENSCCAG00000029851)	MCM2 (ENSCCAG00000015881)
Bolivian squirrel monkey	MODERN SPECIES	85	SH2D1A (ENSSBOG00000031200) #8	TENM1 (ENSSBOG00000031696) #9	ENSSBOG00000033887 ##7	PRR32 (ENSSBOG00000019883) #12	ENSSBOG00000020087	ENSSBOG00000035106	SMARCA1 (ENSSBOG00000020641) #15	OCRL (ENSSBOG00000032679) #16	ENSSBOG00000024330	APLN (ENSSBOG00000028355)	ENSSBOG00000018313	XPNPEP2 (ENSSBOG00000030099) #18	SASH3 (ENSSBOG00000012311) #19	ZDHHC9 (ENSSBOG00000028077) #20	ENSSBOG00000009039 #21	BCORL1 (ENSSBOG00000027667) #22	ELF4 (ENSSBOG00000036270) #23	AIFM1 (ENSSBOG00000034121) #24	RAB33A (ENSSBOG00000025176)	ZNF280C (ENSSBOG00000028489) #25	SLC25A14 (ENSSBOG00000005960) ##26	RBMX2 (ENSSBOG00000023007) #28	ENOX2 (ENSSBOG00000024768) #29	ENSSBOG00000031138	ARHGAP36 (ENSSBOG00000030694) #30	IGSF1 (ENSSBOG00000029290) #31	STK26 (ENSSBOG00000033898) #34	FRMD7 (ENSSBOG00000022250) #35	ENSSBOG00000018634	RAP2C (ENSSBOG00000020056) #37	MBNL3 (ENSSBOG00000026045)
Mas night monkey	MODERN SPECIES	929			PRR32 (ENSANAG00000030781) #12	ENSANAG00000005705	ENSANAG00000038380	ENSANAG00000034558	ENSANAG00000022590	SMARCA1 (ENSANAG00000023098) #15	OCRL (ENSANAG00000025371) #16	ENSANAG00000023052 #17	XPNPEP2 (ENSANAG00000028579) #18	SASH3 (ENSANAG00000033327) #19	ZDHHC9 (ENSANAG00000029351) #20	ENSANAG00000018118	ENSANAG00000027545 #21	BCORL1 (ENSANAG00000028157) #22	ELF4 (ENSANAG00000032502) #23	AIFM1 (ENSANAG00000033241) #24	RAB33A (ENSANAG00000027971)	ZNF280C (ENSANAG00000026195) #25	SLC25A14 (ENSANAG00000031757) ##26	RBMX2 (ENSANAG00000032814) #28	ENSANAG00000036631	ENOX2 (ENSANAG00000021120) #29	ENSANAG00000033307	ARHGAP36 (ENSANAG00000022925) #30	IGSF1 (ENSANAG00000024439) #31	ENSANAG00000037790	ENSANAG00000030022	STK26 (ENSANAG00000037908) #34	FRMD7 (ENSANAG00000001063) #35
Tarsier	MODERN SPECIES	3827											APLN (ENSTSYG00000033497)	XPNPEP2 (ENSTSYG00000008767) #18	SASH3 (ENSTSYG00000008822) #19	ZDHHC9 (ENSTSYG00000037573) #20	UTP14A (ENSTSYG00000009415) #21	BCORL1 (ENSTSYG00000025467) #22
Strepsirrhini	ANCESTRAL SPECIES	38	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.c #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263574.b.j #32	ENSGT01100000263574.b.i.b ##32	ENSGT00940000157904.d #34
Lemuriformes	ANCESTRAL SPECIES	53	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A.m #7	ENSGT00940000155920 #8	ENSGT00960000190053	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.n #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.c #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a
Lemuriformes_a	ANCESTRAL SPECIES	134									ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.c #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37
Greater bamboo lemur	MODERN SPECIES	989									SMARCA1 (ENSPSMG00000017092) #15	OCRL (ENSPSMG00000017170) #16	APLN (ENSPSMG00000017219)	XPNPEP2 (ENSPSMG00000017262) #18	SASH3 (ENSPSMG00000017281) #19	ZDHHC9 (ENSPSMG00000017325) #20	ENSPSMG00000017608 #21	BCORL1 (ENSPSMG00000018012) #22	ELF4 (ENSPSMG00000018046) #23	AIFM1 (ENSPSMG00000018237) #24	RAB33A (ENSPSMG00000018484)	ZNF280C (ENSPSMG00000018490) #25	SLC25A14 (ENSPSMG00000018539) #26	GPR119 (ENSPSMG00000018564) #27	ENSPSMG00000018583 #28
Coquerels sifaka	MODERN SPECIES	568	NOP53 (ENSPCOG00000016124)	SELENOW (ENSPCOG00000013997)	CRX (ENSPCOG00000021790)	SULT2A1 (ENSPCOG00000014554)	ENSPCOG00000019131	CABP5 (ENSPCOG00000028027)	LIG1 (ENSPCOG00000027835)	ZSWIM9 (ENSPCOG00000016877)	SMARCA1 (ENSPCOG00000020722) #15	OCRL (ENSPCOG00000017071) #16	APLN (ENSPCOG00000002186)	XPNPEP2 (ENSPCOG00000026546) #18	SASH3 (ENSPCOG00000006885) #19	ZDHHC9 (ENSPCOG00000028621) #20	ENSPCOG00000017594 #21	BCORL1 (ENSPCOG00000005206) #22	ELF4 (ENSPCOG00000021076) #23	AIFM1 (ENSPCOG00000010498) #24	RAB33A (ENSPCOG00000028877)	ZNF280C (ENSPCOG00000006344) #25	SLC25A14 (ENSPCOG00000027935) #26	RBMX2 (ENSPCOG00000026182) #28	ENSPCOG00000019177	ENOX2 (ENSPCOG00000016954) #29	ARHGAP36 (ENSPCOG00000011731) #30	IGSF1 (ENSPCOG00000006255) #31	STK26 (ENSPCOG00000015477) #34	FRMD7 (ENSPCOG00000023816) #35	RAP2C (ENSPCOG00000015696) #37	MBNL3 (ENSPCOG00000025398)	HS6ST2 (ENSPCOG00000014385)
Mouse lemur	MODERN SPECIES	169	PRR32 (ENSMICG00000000543) #12	ENSMICG00000011704	ENSMICG00000042684	ENSMICG00000026701	ENSMICG00000037227	ENSMICG00000027085	SMARCA1 (ENSMICG00000015768) #15	OCRL (ENSMICG00000015790) #16	APLN (ENSMICG00000043883)	ENSMICG00000036721	XPNPEP2 (ENSMICG00000015814) #18	SASH3 (ENSMICG00000026483) #19	ZDHHC9 (ENSMICG00000015847) #20	ENSMICG00000032019	ENSMICG00000005161 #21	BCORL1 (ENSMICG00000015994) #22	ELF4 (ENSMICG00000007427) #23	ENSMICG00000016006 #24	RAB33A (ENSMICG00000034851)	ZNF280C (ENSMICG00000010604) #25	ENSMICG00000015126 #26	ENSMICG00000031524	RBMX2 (ENSMICG00000015139) #28	ENSMICG00000047639	ENSMICG00000046419	ENSMICG00000045087	ENOX2 (ENSMICG00000000062) #29	ENSMICG00000032388	ARHGAP36 (ENSMICG00000001343) #30	IGSF1 (ENSMICG00000015205) #31	STK26 (ENSMICG00000009064) #34
Bushbaby	MODERN SPECIES	224									SMARCA1 (ENSOGAG00000004399) #15	OCRL (ENSOGAG00000004402) #16	ENSOGAG00000027998	XPNPEP2 (ENSOGAG00000000411) #18	SASH3 (ENSOGAG00000000412) #19	ZDHHC9 (ENSOGAG00000000413) #20	ENSOGAG00000013228 #21	BCORL1 (ENSOGAG00000026176) #22	ELF4 (ENSOGAG00000012759) #23	AIFM1 (ENSOGAG00000012692) #24	RAB33A (ENSOGAG00000033299)	ZNF280C (ENSOGAG00000012696) #25	SLC25A14 (ENSOGAG00000006069) #26	GPR119 (ENSOGAG00000029043) #27	ENSOGAG00000024158	ENOX2 (ENSOGAG00000003494) #29	ARHGAP36 (ENSOGAG00000000291) #30	IGSF1 (ENSOGAG00000013044) #31	ENSOGAG00000025500	ENSOGAG00000026712	OR13H1 (ENSOGAG00000026372) #32	ENSOGAG00000027130 ##32	STK26 (ENSOGAG00000002621) #34
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00980000198742	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b
Tree shrew	MODERN SPECIES	5729																ENSTBEG00000017455 #22	ELF4 (ENSTBEG00000017653) #23	AIFM1 (ENSTBEG00000017750) #24	RAB33A (ENSTBEG00000009702)
Glires	ANCESTRAL SPECIES	10	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b
Rodentia	ANCESTRAL SPECIES	10	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT01030000236254	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Sciuridae	ANCESTRAL SPECIES	27	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01010000230270	ENSGT01030000234566.e.b.b.b #9	ENSGT00530000063539.b.m.a	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Marmotini	ANCESTRAL SPECIES	63	ENSGT01010000230270	ENSGT01030000234566.e.b.b.b #9	ENSGT00530000063539.b.m.a	ENSGT00960000187913	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000172381	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Marmotini_b	ANCESTRAL SPECIES	78	ENSGT01030000234566.e.b.b.b #9	ENSGT00530000063539.b.m.a	ENSGT00960000187913	ENSGT00940000161322.u #10	ENSGT00940000161322.v #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000172381	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Arctic ground squirrel	MODERN SPECIES	597								SMARCA1 (ENSUPAG00010011630) #15	OCRL (ENSUPAG00010011605) #16	ENSUPAG00010011596	XPNPEP2 (ENSUPAG00010011559) #18	SASH3 (ENSUPAG00010011540) #19	ZDHHC9 (ENSUPAG00010011530) #20	ENSUPAG00010011519	ENSUPAG00010011506 #21	BCORL1 (ENSUPAG00010011466) #22	ELF4 (ENSUPAG00010011421) #23	AIFM1 (ENSUPAG00010011388) #24	RAB33A (ENSUPAG00010011381)
Squirrel	MODERN SPECIES	79	SH2D1A (ENSSTOG00000014003) #8	TENM1 (ENSSTOG00000000440) #9	ENSSTOG00000019526	ENSSTOG00000026965 #10	ENSSTOG00000029777 #10	PRR32 (ENSSTOG00000008662) #12	ACTRT1 (ENSSTOG00000023127) #13	SMARCA1 (ENSSTOG00000014524) #15	OCRL (ENSSTOG00000016123) #16	APLN (ENSSTOG00000034051)	XPNPEP2 (ENSSTOG00000008211) #18	SASH3 (ENSSTOG00000008235) #19	ZDHHC9 (ENSSTOG00000022858) #20	ENSSTOG00000034215	ENSSTOG00000008246 #21	BCORL1 (ENSSTOG00000023116) #22	ELF4 (ENSSTOG00000008325) #23	AIFM1 (ENSSTOG00000008362) #24	RAB33A (ENSSTOG00000008386)	ZNF280C (ENSSTOG00000033188) #25	SLC25A14 (ENSSTOG00000015384) #26	GPR119 (ENSSTOG00000015388) #27	RBMX2 (ENSSTOG00000015391) #28	ENSSTOG00000029310	ENOX2 (ENSSTOG00000001402) #29	ARHGAP36 (ENSSTOG00000000334) #30	ENSSTOG00000024886	ENSSTOG00000024234	IGSF1 (ENSSTOG00000012034) #31	ENSSTOG00000019507	ENSSTOG00000021455
Alpin marmot	MODERN SPECIES	54	ENSMMMG00000005584	ENSMMMG00000005575	ENSMMMG00000005544	PRR32 (ENSMMMG00000005535) #12	ACTRT1 (ENSMMMG00000005527) #13	ENSMMMG00000005511	SMARCA1 (ENSMMMG00000005411) #15	OCRL (ENSMMMG00000005305) #16	APLN (ENSMMMG00000005301)	ENSMMMG00000005279 #18	SASH3 (ENSMMMG00000005265) #19	ZDHHC9 (ENSMMMG00000005236) #20	ENSMMMG00000005227	ENSMMMG00000005218	ENSMMMG00000005190 #21	BCORL1 (ENSMMMG00000005153) #22	ELF4 (ENSMMMG00000005130) #23	AIFM1 (ENSMMMG00000005052) #24	RAB33A (ENSMMMG00000005045)	ZNF280C (ENSMMMG00000004815) #25	SLC25A14 (ENSMMMG00000004762) #26	GPR119 (ENSMMMG00000004754) #27	RBMX2 (ENSMMMG00000004746) #28	ENSMMMG00000004730	ENOX2 (ENSMMMG00000004709) #29	ARHGAP36 (ENSMMMG00000004666) #30	ENSMMMG00000004661	ENSMMMG00000004653	IGSF1 (ENSMMMG00000004601) #31	ENSMMMG00000004581	ENSMMMG00000004577
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005010491	PRR32 (ENSSVLG00005010443) #12	ENSSVLG00005019428	ENSSVLG00005019280 #13	ENSSVLG00005019234	ENSSVLG00005019212 #13	ENSSVLG00005019160	SMARCA1 (ENSSVLG00005018960) #15	OCRL (ENSSVLG00005018821) #16	APLN (ENSSVLG00005018777)	XPNPEP2 (ENSSVLG00005018521) #18	SASH3 (ENSSVLG00005018423) #19	ZDHHC9 (ENSSVLG00005018368) #20	ENSSVLG00005018331	ENSSVLG00005018028 #21	BCORL1 (ENSSVLG00005017926) #22	ELF4 (ENSSVLG00005017888) #23	AIFM1 (ENSSVLG00005017618) #24	RAB33A (ENSSVLG00005017546)	ENSSVLG00005017501	ZNF280C (ENSSVLG00005017449) #25	ENSSVLG00005017430	SLC25A14 (ENSSVLG00005017269) #26	GPR119 (ENSSVLG00005017240) #27	ENSSVLG00005017187	ENSSVLG00005017129	ENOX2 (ENSSVLG00005016762) #29	ARHGAP36 (ENSSVLG00005016523) #30	ENSSVLG00005016469	ENSSVLG00005016427	IGSF1 (ENSSVLG00005015743) #31
Hystricomorpha	ANCESTRAL SPECIES	57	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.m #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34
Naked mole-rat female	MODERN SPECIES	31	IL1RAPL2 (ENSHGLG00000001940)	ENSHGLG00000043015	FAM199X (ENSHGLG00000012070)	ENSHGLG00000050991	ENSHGLG00000019483	ENSHGLG00000048190	ENSHGLG00000050554	ENSHGLG00000005330 #16	ENSHGLG00000048466	ENSHGLG00000006742	XPNPEP2 (ENSHGLG00000002423) #18	SASH3 (ENSHGLG00000041053) #19	ZDHHC9 (ENSHGLG00000037667) #20	ENSHGLG00000002939 #21	ENSHGLG00000020156	BCORL1 (ENSHGLG00000003484) #22	ELF4 (ENSHGLG00000038769) #23	AIFM1 (ENSHGLG00000018635) #24	RAB33A (ENSHGLG00000018536)	ENSHGLG00000037642	ENSHGLG00000043397	ENSHGLG00000019168 #25	ENSHGLG00000050814	ENSHGLG00000034808	ENSHGLG00000018174 #26	GPR119 (ENSHGLG00000020429) #27	RBMX2 (ENSHGLG00000048307) #28	ENSHGLG00000028508	ENOX2 (ENSHGLG00000010881) #29	ARHGAP36 (ENSHGLG00000013596) #30	ENSHGLG00000002092
Hystricomorpha_a	ANCESTRAL SPECIES	71	ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.m #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34
Guinea pig	MODERN SPECIES	145									SMARCA1 (ENSCPOG00000013601) #15	OCRL (ENSCPOG00000013608) #16	APLN (ENSCPOG00000031429)	XPNPEP2 (ENSCPOG00000001250) #18	SASH3 (ENSCPOG00000001253) #19	ZDHHC9 (ENSCPOG00000001256) #20	ENSCPOG00000014231 #21	BCORL1 (ENSCPOG00000024563) #22	ELF4 (ENSCPOG00000036591) #23	AIFM1 (ENSCPOG00000013569) #24	RAB33A (ENSCPOG00000000119)	ZNF280C (ENSCPOG00000015074) #25	SLC25A14 (ENSCPOG00000006635) #26	GPR119 (ENSCPOG00000026089) #27	RBMX2 (ENSCPOG00000032744) #28
Hystricomorpha_b	ANCESTRAL SPECIES	97		ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.m #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Degu	MODERN SPECIES	104					ENSODEG00000015085	DCAF12L2 (ENSODEG00000019922) #10	ENSODEG00000012383	SMARCA1 (ENSODEG00000012163) #15	OCRL (ENSODEG00000012324) #16	APLN (ENSODEG00000012158)	XPNPEP2 (ENSODEG00000011534) #18	SASH3 (ENSODEG00000011136) #19	ZDHHC9 (ENSODEG00000013080) #20	ENSODEG00000011700	ENSODEG00000011459 #21	BCORL1 (ENSODEG00000012167) #22	ELF4 (ENSODEG00000012152) #23	ENSODEG00000011635 #24	RAB33A (ENSODEG00000011726)	ZNF280C (ENSODEG00000011118) #25	ENSODEG00000010986	ENSODEG00000010718	SLC25A14 (ENSODEG00000012501) #26	GPR119 (ENSODEG00000019936) #27	RBMX2 (ENSODEG00000012495) #28	ENSODEG00000011307 #29	ARHGAP36 (ENSODEG00000010308) #30	IGSF1 (ENSODEG00000011792) #31	OR13H1 (ENSODEG00000019956) #32	ENSODEG00000011795	STK26 (ENSODEG00000011347) #34
Long-tailed chinchilla	MODERN SPECIES	180		GRIA3 (ENSCLAG00000001098)	THOC2 (ENSCLAG00000002641)	XIAP (ENSCLAG00000001805)	STAG2 (ENSCLAG00000001514)	SH2D1A (ENSCLAG00000001237) #8	TENM1 (ENSCLAG00000002194) #9	DCAF12L2 (ENSCLAG00000017483) #10	SMARCA1 (ENSCLAG00000002171) #15	OCRL (ENSCLAG00000001724) #16	APLN (ENSCLAG00000001685)	XPNPEP2 (ENSCLAG00000001456) #18	SASH3 (ENSCLAG00000001420) #19	ZDHHC9 (ENSCLAG00000001605) #20	ENSCLAG00000001444 #21	BCORL1 (ENSCLAG00000006353) #22	ELF4 (ENSCLAG00000005511) #23	AIFM1 (ENSCLAG00000005316) #24	RAB33A (ENSCLAG00000005031)	ZNF280C (ENSCLAG00000003045) #25	SLC25A14 (ENSCLAG00000002880) #26	GPR119 (ENSCLAG00000017486) #27	RBMX2 (ENSCLAG00000001141) #28	ENOX2 (ENSCLAG00000000940) #29	ARHGAP36 (ENSCLAG00000000898) #30	IGSF1 (ENSCLAG00000003347) #31	ENSCLAG00000017566	OR13H1 (ENSCLAG00000002762) #32	STK26 (ENSCLAG00000001539) #34	FRMD7 (ENSCLAG00000001386) #35	RAP2C (ENSCLAG00000001300) #37
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Kangaroo rat	MODERN SPECIES	357	ENSDORG00000027486	ENSDORG00000027353	Xiap (ENSDORG00000010762)	Stag2 (ENSDORG00000003109)	Sh2d1a (ENSDORG00000012131) #8	Tenm1 (ENSDORG00000012135) #9	ENSDORG00000006515 #10	Prr32 (ENSDORG00000008230) #12	Smarca1 (ENSDORG00000009270) #15	Ocrl (ENSDORG00000004469) #16	Apln (ENSDORG00000007273)	Xpnpep2 (ENSDORG00000012043) #18	Sash3 (ENSDORG00000012044) #19	Zdhhc9 (ENSDORG00000024469) #20	ENSDORG00000009761 #21	Bcorl1 (ENSDORG00000014953) #22	Elf4 (ENSDORG00000014956) #23	ENSDORG00000028456 #24	ENSDORG00000003401 #24	Rab33a (ENSDORG00000024129)	Zfp280c (ENSDORG00000003403) #25	Slc25a14 (ENSDORG00000002379) #26	Gpr119 (ENSDORG00000002381) #27	ENSDORG00000028737	Enox2 (ENSDORG00000013452) #29	Arhgap36 (ENSDORG00000015265) #30	Igsf1 (ENSDORG00000011658) #31	Or5bh3 (ENSDORG00000028251)	ENSDORG00000005431	ENSDORG00000025888	Stk26 (ENSDORG00000014606) #34
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Lesser Egyptian jerboa	MODERN SPECIES	53	ENSJJAG00000009849 #10	Prr32 (ENSJJAG00000016058) #12	ENSJJAG00000018368	ENSJJAG00000013754	ENSJJAG00000023370	ENSJJAG00000007116 #13	ENSJJAG00000008872 #13	Smarca1 (ENSJJAG00000002593) #15	Ocrl (ENSJJAG00000023666) #16	ENSJJAG00000005075	Apln (ENSJJAG00000024288)	Xpnpep2 (ENSJJAG00000019789) #18	Sash3 (ENSJJAG00000007889) #19	Zdhhc9 (ENSJJAG00000023971) #20	Utp14a (ENSJJAG00000023063) #21	Bcorl1 (ENSJJAG00000016106) #22	Elf4 (ENSJJAG00000019031) #23	ENSJJAG00000016047 #24	Rab33a (ENSJJAG00000007444)	Zfp280c (ENSJJAG00000005039) #25	ENSJJAG00000016087 #26	Gpr119 (ENSJJAG00000015379) #27	Rbmx2 (ENSJJAG00000019621) #28	Enox2 (ENSJJAG00000024346) #29	Arhgap36 (ENSJJAG00000022709) #30	ENSJJAG00000014737	Igsf1 (ENSJJAG00000015248) #31	Stk26 (ENSJJAG00000021007) #34	Frmd7 (ENSJJAG00000016076) #35	Rap2c (ENSJJAG00000014198) #37	Mbnl3 (ENSJJAG00000004793)
Muroidea	ANCESTRAL SPECIES	13	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Upper Galilee mountains blind mole rat	MODERN SPECIES	521									Smarca1 (ENSNGAG00000006492) #15	Ocrl (ENSNGAG00000017805) #16	Apln (ENSNGAG00000014234)	Xpnpep2 (ENSNGAG00000016566) #18	Sash3 (ENSNGAG00000002324) #19	Zdhhc9 (ENSNGAG00000015180) #20	Utp14a (ENSNGAG00000020390) #21	Bcorl1 (ENSNGAG00000002187) #22	Elf4 (ENSNGAG00000018583) #23	ENSNGAG00000012394 #24	Rab33a (ENSNGAG00000013169)	Zfp280c (ENSNGAG00000020507) #25	Slc25a14 (ENSNGAG00000018111) #26	Gpr119 (ENSNGAG00000005037) #27	Rbmx2 (ENSNGAG00000020108) #28	Enox2 (ENSNGAG00000002399) #29	Arhgap36 (ENSNGAG00000000985) #30	Igsf1 (ENSNGAG00000016332) #31	Or11n2 (ENSNGAG00000019199)	Stk26 (ENSNGAG00000020426) #34	Frmd7 (ENSNGAG00000014277) #35	Rap2c (ENSNGAG00000017485) #37	Mbnl3 (ENSNGAG00000019720)
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687
Cricetinae	ANCESTRAL SPECIES	29	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870.b #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687
Chinese hamster chok1gshd	MODERN SPECIES	16	Sh2d1a (ENSCGRG00001011023) #8	Tenm1 (ENSCGRG00001015057) #9	Tex13c1 (ENSCGRG00001009417) #7	Dcaf12l2 (ENSCGRG00001009053) #10	ENSCGRG00001004377	Dcaf12l1 (ENSCGRG00001018908) #10	Prr32 (ENSCGRG00001015711) #12	Actrt1 (ENSCGRG00001004847) #13	Smarca1 (ENSCGRG00001010776) #15	Ocrl (ENSCGRG00001013791) #16	Apln (ENSCGRG00001020724)	Xpnpep2 (ENSCGRG00001010203) #18	Sash3 (ENSCGRG00001000781) #19	Zdhhc9 (ENSCGRG00001016578) #20	Utp14a (ENSCGRG00001013594) #21	Bcorl1 (ENSCGRG00001005153) #22	Elf4 (ENSCGRG00001018539) #23	Aifm1 (ENSCGRG00001015327) #24	Rab33a (ENSCGRG00001001211)	Zfp280c (ENSCGRG00001016803) #25	Slc25a14 (ENSCGRG00001019792) #26	Gpr119 (ENSCGRG00001009099) #27	Rbmx2 (ENSCGRG00001019209) #28	ENSCGRG00001017205	Fsip2l (ENSCGRG00001001567)	Enox2 (ENSCGRG00001003348) #29	Arhgap36 (ENSCGRG00001018379) #30	Or5o1 (ENSCGRG00001011247)	Igsf1 (ENSCGRG00001021136) #31	Or11n2 (ENSCGRG00001010038)	Or5bh3 (ENSCGRG00001010692)
Golden Hamster	MODERN SPECIES	683	Xiap (ENSMAUG00000018212)	Stag2 (ENSMAUG00000011328)	Tex13d (ENSMAUG00000011532) #7	Sh2d1a (ENSMAUG00000015196) #8	Tenm1 (ENSMAUG00000002816) #9	Dcaf12l1 (ENSMAUG00000000156) #10	Prr32 (ENSMAUG00000005400) #12	Actrt1 (ENSMAUG00000016644) #13	Smarca1 (ENSMAUG00000008133) #15	Ocrl (ENSMAUG00000011733) #16	Apln (ENSMAUG00000010997)	Xpnpep2 (ENSMAUG00000011869) #18	Sash3 (ENSMAUG00000018037) #19	Zdhhc9 (ENSMAUG00000000161) #20	Utp14a (ENSMAUG00000017487) #21	Bcorl1 (ENSMAUG00000000387) #22	ENSMAUG00000011408 #23	Aifm1 (ENSMAUG00000000291) #24	Rab33a (ENSMAUG00000014025)	Zfp280c (ENSMAUG00000015868) #25	Slc25a14 (ENSMAUG00000019586) #26	Gpr119 (ENSMAUG00000017036) #27	Rbmx2 (ENSMAUG00000019202) #28	ENSMAUG00000000086	Fsip2l (ENSMAUG00000011624)	Enox2 (ENSMAUG00000009194) #29	Arhgap36 (ENSMAUG00000009314) #30	Igsf1 (ENSMAUG00000012742) #31
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687
Northern American deer mouse	MODERN SPECIES	475	Rnf113a1 (ENSPEMG00000002490)	Gm9 (ENSPEMG00000017083)	ENSPEMG00000027182	ENSPEMG00000008250	ENSPEMG00000017832	ENSPEMG00000024707	Actrt1 (ENSPEMG00000000971) #13	Smarca1 (ENSPEMG00000017503) #15	Ocrl (ENSPEMG00000012326) #16	Apln (ENSPEMG00000015596)	Xpnpep2 (ENSPEMG00000008851) #18	Sash3 (ENSPEMG00000008731) #19	Zdhhc9 (ENSPEMG00000008850) #20	Utp14a (ENSPEMG00000013553) #21	ENSPEMG00000030795	Bcorl1 (ENSPEMG00000000973) #22	Elf4 (ENSPEMG00000010895) #23	Aifm1 (ENSPEMG00000018050) #24	Rab33a (ENSPEMG00000010237)	Zfp280c (ENSPEMG00000010001) #25	Slc25a14 (ENSPEMG00000018761) #26	Gpr119 (ENSPEMG00000018553) #27	Rbmx2 (ENSPEMG00000015660) #28	Fsip2l (ENSPEMG00000027224)	Enox2 (ENSPEMG00000023684) #29	Arhgap36 (ENSPEMG00000023858) #30	Or5o1 (ENSPEMG00000026617)	Igsf1 (ENSPEMG00000009685) #31	ENSPEMG00000029906	Or11n2 (ENSPEMG00000010046)	Or5bh3 (ENSPEMG00000028222)
Prairie vole	MODERN SPECIES	360	ENSMOCG00000006467	Dcaf12l2 (ENSMOCG00000021979) #10	Dcaf12l1 (ENSMOCG00000009747) #10	ENSMOCG00000014325	Prr32 (ENSMOCG00000011393) #12	Actrt1 (ENSMOCG00000013689) #13	ENSMOCG00000010136	ENSMOCG00000017233	Smarca1 (ENSMOCG00000009464) #15	Ocrl (ENSMOCG00000010531) #16	Apln (ENSMOCG00000001240)	Xpnpep2 (ENSMOCG00000020269) #18	Sash3 (ENSMOCG00000010968) #19	Zdhhc9 (ENSMOCG00000009045) #20	Utp14a (ENSMOCG00000002489) #21	Bcorl1 (ENSMOCG00000007803) #22	Elf4 (ENSMOCG00000000912) #23	Aifm1 (ENSMOCG00000022628) #24	Rab33a (ENSMOCG00000020142)	Zfp280c (ENSMOCG00000002435) #25	ENSMOCG00000020880
Murinae	ANCESTRAL SPECIES	14	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Rat	MODERN SPECIES	46	Dcaf12l2 (ENSRNOG00000031533) #10	Dcaf12l1 (ENSRNOG00000023458) #10	Prr32 (ENSRNOG00000049388) #12	LOC681067 (ENSRNOG00000063745)	ENSRNOG00000063729	Actrt1 (ENSRNOG00000003456) #13	ENSRNOG00000063829	LOC681300 (ENSRNOG00000003734)	ENSRNOG00000064782	Smarca1 (ENSRNOG00000003762) #15	Ocrl (ENSRNOG00000003875) #16	Xpnpep2 (ENSRNOG00000004009) #18	Sash3 (ENSRNOG00000004409) #19	Zdhhc9 (ENSRNOG00000004581) #20	Utp14a (ENSRNOG00000005012) #21	Bcorl1 (ENSRNOG00000005076) #22	Elf4 (ENSRNOG00000005352) #23	Aifm1 (ENSRNOG00000006067) #24	Rab33a (ENSRNOG00000006698)	Zfp280c (ENSRNOG00000006797) #25	Slc25a14 (ENSRNOG00000006871) #26	Gpr119 (ENSRNOG00000024517) #27	Rbmx2 (ENSRNOG00000007371) #28	RGD1564955 (ENSRNOG00000024068)	Enox2 (ENSRNOG00000030622) #29	Arhgap36 (ENSRNOG00000007552) #30	LOC120099272 (ENSRNOG00000070141)	Or11q2 (ENSRNOG00000033413)	Or5o1 (ENSRNOG00000030722)	Igsf1 (ENSRNOG00000007600) #31	Or11n2 (ENSRNOG00000037506)
Mus	ANCESTRAL SPECIES	9	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Shrew mouse	MODERN SPECIES	23	Stag2 (MGP_PahariEiJ_G0031571)	Tex13d (MGP_PahariEiJ_G0031572) #7	Sh2d1a (MGP_PahariEiJ_G0031573) #8	Tenm1 (MGP_PahariEiJ_G0031574) #9	Tex13c1 (MGP_PahariEiJ_G0031575) #7	Dcaf12l2 (MGP_PahariEiJ_G0031576) #10	Prr32 (MGP_PahariEiJ_G0031577) #12	Actrt1 (MGP_PahariEiJ_G0031578) #13	Smarca1 (MGP_PahariEiJ_G0031579) #15	Ocrl (MGP_PahariEiJ_G0031580) #16	Apln (MGP_PahariEiJ_G0031581)	Xpnpep2 (MGP_PahariEiJ_G0031582) #18	Sash3 (MGP_PahariEiJ_G0031583) #19	Zdhhc9 (MGP_PahariEiJ_G0031584) #20	Utp14a (MGP_PahariEiJ_G0031585) #21	Bcorl1 (MGP_PahariEiJ_G0031586) #22	Elf4 (MGP_PahariEiJ_G0031587) #23	Aifm1 (MGP_PahariEiJ_G0031588) #24	Rab33a (MGP_PahariEiJ_G0031589)	Zfp280c (MGP_PahariEiJ_G0031590) #25	Slc25a14 (MGP_PahariEiJ_G0031591) #26	Gpr119 (MGP_PahariEiJ_G0031592) #27	Rbmx2 (MGP_PahariEiJ_G0031593) #28	Fsip2l (MGP_PahariEiJ_G0031594)	Enox2 (MGP_PahariEiJ_G0031595) #29	Arhgap36 (MGP_PahariEiJ_G0031596) #30	Or11q2 (MGP_PahariEiJ_G0031597)	Or5o1 (MGP_PahariEiJ_G0031598)	Igsf1 (MGP_PahariEiJ_G0031599) #31	Or11n2 (MGP_PahariEiJ_G0031600)	Or5bh3 (MGP_PahariEiJ_G0031601)
Mus_A	ANCESTRAL SPECIES	15	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Ryukyu mouse	MODERN SPECIES	19	Stag2 (MGP_CAROLIEiJ_G0033025)	Tex13d (MGP_CAROLIEiJ_G0033026) #7	Tenm1 (MGP_CAROLIEiJ_G0033028) #9	Tex13c1 (MGP_CAROLIEiJ_G0033029) #7	Dcaf12l2 (MGP_CAROLIEiJ_G0033030) #10	Dcaf12l1 (MGP_CAROLIEiJ_G0033031) #10	Prr32 (MGP_CAROLIEiJ_G0033032) #12	Actrt1 (MGP_CAROLIEiJ_G0033033) #13	Smarca1 (MGP_CAROLIEiJ_G0033034) #15	Ocrl (MGP_CAROLIEiJ_G0033035) #16	Apln (MGP_CAROLIEiJ_G0033036)	Xpnpep2 (MGP_CAROLIEiJ_G0033037) #18	Sash3 (MGP_CAROLIEiJ_G0033038) #19	Zdhhc9 (MGP_CAROLIEiJ_G0033039) #20	Utp14a (MGP_CAROLIEiJ_G0033040) #21	Bcorl1 (MGP_CAROLIEiJ_G0033041) #22	Elf4 (MGP_CAROLIEiJ_G0033042) #23	Aifm1 (MGP_CAROLIEiJ_G0033043) #24	Rab33a (MGP_CAROLIEiJ_G0033044)	Zfp280c (MGP_CAROLIEiJ_G0033045) #25	Slc25a14 (MGP_CAROLIEiJ_G0033046) #26	Gpr119 (MGP_CAROLIEiJ_G0033047) #27	Rbmx2 (MGP_CAROLIEiJ_G0033048) #28	Fsip2l (MGP_CAROLIEiJ_G0033049)	Enox2 (MGP_CAROLIEiJ_G0033050) #29	Arhgap36 (MGP_CAROLIEiJ_G0033051) #30	Or11q2 (MGP_CAROLIEiJ_G0033052)	Or5o1 (MGP_CAROLIEiJ_G0033053)	MGP_CAROLIEiJ_G0033054 #31	Or11n2 (MGP_CAROLIEiJ_G0033055)	Or5bh3 (MGP_CAROLIEiJ_G0033056)
Mus_B	ANCESTRAL SPECIES	14	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f
Mouse	MODERN SPECIES	37	Tex13d (ENSMUSG00000105993) #7	Sh2d1a (ENSMUSG00000005696) #8	Tenm1 (ENSMUSG00000016150) #9	Tex13c1 (ENSMUSG00000078320) #7	Dcaf12l2 (ENSMUSG00000050926) #10	Dcaf12l1 (ENSMUSG00000045284) #10	Prr32 (ENSMUSG00000037086) #12	Actrt1 (ENSMUSG00000046615) #13	Smarca1 (ENSMUSG00000031099) #15	Ocrl (ENSMUSG00000001173) #16	Apln (ENSMUSG00000037010)	Xpnpep2 (ENSMUSG00000037005) #18	Sash3 (ENSMUSG00000031101) #19	Zdhhc9 (ENSMUSG00000036985) #20	Utp14a (ENSMUSG00000063785) #21	Bcorl1 (ENSMUSG00000036959) #22	Elf4 (ENSMUSG00000031103) #23	Aifm1 (ENSMUSG00000036932) #24	Rab33a (ENSMUSG00000031104)	Zfp280c (ENSMUSG00000036916) #25	Slc25a14 (ENSMUSG00000031105) #26	Gpr119 (ENSMUSG00000051209) #27	Rbmx2 (ENSMUSG00000031107) #28	Fsip2l (ENSMUSG00000079606)	Enox2 (ENSMUSG00000031109) #29	Arhgap36 (ENSMUSG00000036198) #30	Or11q2 (ENSMUSG00000071764)	Or5o1 (ENSMUSG00000067971)	Igsf1 (ENSMUSG00000031111) #31	Or11n2 (ENSMUSG00000056281)	Or5bh3 (ENSMUSG00000050504)
Mus_C	ANCESTRAL SPECIES	27	ENSGT00940000161768.A.j #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.i #7	ENSGT00940000161322.q #10	ENSGT00940000161322.r #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.o #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.f	ENSGT00940000164687
Steppe mouse	MODERN SPECIES	1046																ENSMSIG00000002098 #22
spretus	MODERN SPECIES	19	Stag2 (MGP_SPRETEiJ_G0034183)	Tex13d (MGP_SPRETEiJ_G0034184) #7	Tenm1 (MGP_SPRETEiJ_G0034186) #9	Tex13c1 (MGP_SPRETEiJ_G0034187) #7	Dcaf12l2 (MGP_SPRETEiJ_G0034188) #10	Dcaf12l1 (MGP_SPRETEiJ_G0034189) #10	Prr32 (MGP_SPRETEiJ_G0034190) #12	Actrt1 (MGP_SPRETEiJ_G0034191) #13	Smarca1 (MGP_SPRETEiJ_G0034192) #15	Ocrl (MGP_SPRETEiJ_G0034193) #16	Apln (MGP_SPRETEiJ_G0034194)	Xpnpep2 (MGP_SPRETEiJ_G0034195) #18	Sash3 (MGP_SPRETEiJ_G0034196) #19	Zdhhc9 (MGP_SPRETEiJ_G0034197) #20	Utp14a (MGP_SPRETEiJ_G0034198) #21	Bcorl1 (MGP_SPRETEiJ_G0034199) #22	Elf4 (MGP_SPRETEiJ_G0034200) #23	Aifm1 (MGP_SPRETEiJ_G0034201) #24	Rab33a (MGP_SPRETEiJ_G0034202)	Zfp280c (MGP_SPRETEiJ_G0034203) #25	Slc25a14 (MGP_SPRETEiJ_G0034204) #26	Gpr119 (MGP_SPRETEiJ_G0034205) #27	Rbmx2 (MGP_SPRETEiJ_G0034206) #28	Fsip2l (MGP_SPRETEiJ_G0034207)	Enox2 (MGP_SPRETEiJ_G0034208) #29	Arhgap36 (MGP_SPRETEiJ_G0034209) #30	Or11q2 (MGP_SPRETEiJ_G0034210)	Or5o1 (MGP_SPRETEiJ_G0034211)	Igsf1 (MGP_SPRETEiJ_G0034212) #31	Or11n2 (MGP_SPRETEiJ_G0034213)	Or5bh3 (MGP_SPRETEiJ_G0034214)
Lagomorpha	ANCESTRAL SPECIES	51	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Pika	MODERN SPECIES	5046																BCORL1 (ENSOPRG00000011442) #22	ELF4 (ENSOPRG00000011469) #23
Rabbit	MODERN SPECIES	1401	ENSOCUG00000006392	ENSOCUG00000010499 #10	ENSOCUG00000000908 #10	PRR32 (ENSOCUG00000015056) #12	ENSOCUG00000029410 #13	ENSOCUG00000002602 #13	ENSOCUG00000034526	ENSOCUG00000030104	ENSOCUG00000025977	SMARCA1 (ENSOCUG00000001047) #15	OCRL (ENSOCUG00000016167) #16	APLN (ENSOCUG00000022649)	XPNPEP2 (ENSOCUG00000010636) #18	ZDHHC9 (ENSOCUG00000001779) #20	ENSOCUG00000016185 #21	BCORL1 (ENSOCUG00000002913) #22	ELF4 (ENSOCUG00000013238) #23	AIFM1 (ENSOCUG00000002920) #24	RAB33A (ENSOCUG00000002932)	ZNF280C (ENSOCUG00000002934) #25	SLC25A14 (ENSOCUG00000010391) #26	GPR119 (ENSOCUG00000011805) #27	ENSOCUG00000023570	RBMX2 (ENSOCUG00000011809) #28	ENSOCUG00000026298	ENOX2 (ENSOCUG00000012625) #29	ARHGAP36 (ENSOCUG00000015299) #30	IGSF1 (ENSOCUG00000009769) #31	ENSOCUG00000031494	ENSOCUG00000023391	OR13H1 (ENSOCUG00000011316) #32
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00980000198742	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000174083	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a
Suina	ANCESTRAL SPECIES	7	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT01100000263572.a.a.a.a.a.b.d.b
Pig	MODERN SPECIES	300	ENSSSCG00000032855	ENSSSCG00000062569	ENSSSCG00000060751	ENSSSCG00000052425	ENSSSCG00000057077	ENSSSCG00000060348	ACTRT1 (ENSSSCG00000012648) #13	SMARCA1 (ENSSSCG00000012649) #15	OCRL (ENSSSCG00000012650) #16	APLN (ENSSSCG00000048443)	XPNPEP2 (ENSSSCG00000012651) #18	SASH3 (ENSSSCG00000012652) #19	ZDHHC9 (ENSSSCG00000012653) #20	ENSSSCG00000030606	ENSSSCG00000012654 #21	BCORL1 (ENSSSCG00000012655) #22	ELF4 (ENSSSCG00000012656) #23	AIFM1 (ENSSSCG00000012657) #24	RAB33A (ENSSSCG00000012658)	ZNF280C (ENSSSCG00000012659) #25	SLC25A14 (ENSSSCG00000012660) #26	GPR119 (ENSSSCG00000012661) #27	RBMX2 (ENSSSCG00000032739) #28	ENSSSCG00000054586	ENOX2 (ENSSSCG00000012663) #29	ENSSSCG00000012669 #30	ENSSSCG00000012668	IGSF1 (ENSSSCG00000012667) #31	ENSSSCG00000012666	ENSSSCG00000012665	ENSSSCG00000012664
Chacoan peccary	MODERN SPECIES	13	SH2D1A (ENSCWAG00000002130) #8	TENM1 (ENSCWAG00000002189) #9	ENSCWAG00000002366	ENSCWAG00000002381 #10	ENSCWAG00000002386 #10	PRR32 (ENSCWAG00000002388) #12	ACTRT1 (ENSCWAG00000002404) #13	SMARCA1 (ENSCWAG00000002437) #15	OCRL (ENSCWAG00000002577) #16	APLN (ENSCWAG00000002650)	XPNPEP2 (ENSCWAG00000002659) #18	SASH3 (ENSCWAG00000002676) #19	ZDHHC9 (ENSCWAG00000002690) #20	ENSCWAG00000002704	ENSCWAG00000002726 #21	BCORL1 (ENSCWAG00000002809) #22	ELF4 (ENSCWAG00000002826) #23	AIFM1 (ENSCWAG00000002866) #24	RAB33A (ENSCWAG00000002986)	ZNF280C (ENSCWAG00000003001) #25	SLC25A14 (ENSCWAG00000003048) #26	GPR119 (ENSCWAG00000003151) #27	RBMX2 (ENSCWAG00000003159) #28	ENSCWAG00000003176	ENSCWAG00000003181	ENOX2 (ENSCWAG00000003198) #29	ARHGAP36 (ENSCWAG00000003222) #30	IGSF1 (ENSCWAG00000003338) #31	ENSCWAG00000003504	OR13H1 (ENSCWAG00000003515) #32	ENSCWAG00000003516 ##32
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b
Camelidae	ANCESTRAL SPECIES	51	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263574.b.i.a ##32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Arabian camel	MODERN SPECIES	204	TENM1 (ENSCDRG00005007282) #9	ENSCDRG00005007387 #7	ENSCDRG00005007403 #10	ENSCDRG00005007467 #10	PRR32 (ENSCDRG00005007478) #12	ENSCDRG00005007502 #13	ENSCDRG00005007523 #13	SMARCA1 (ENSCDRG00005007563) #15	OCRL (ENSCDRG00005007667) #16	APLN (ENSCDRG00005008050)	XPNPEP2 (ENSCDRG00005008101) #18	SASH3 (ENSCDRG00005008177) #19	ZDHHC9 (ENSCDRG00005008221) #20	ENSCDRG00005008288	ENSCDRG00005008326 #21	BCORL1 (ENSCDRG00005008673) #22	ELF4 (ENSCDRG00005008816) #23	AIFM1 (ENSCDRG00005008929) #24	RAB33A (ENSCDRG00005009622)	ZNF280C (ENSCDRG00005009667) #25	SLC25A14 (ENSCDRG00005009794) #26	GPR119 (ENSCDRG00005010252) #27	RBMX2 (ENSCDRG00005010281) #28	ENSCDRG00005010370	ENOX2 (ENSCDRG00005010425) #29	ARHGAP36 (ENSCDRG00005010650) #30	IGSF1 (ENSCDRG00005010964) #31	ENSCDRG00005012651	OR13H1 (ENSCDRG00005012761) ##32	STK26 (ENSCDRG00005012797) #34	FRMD7 (ENSCDRG00005013245) #35
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b
Cetacea	ANCESTRAL SPECIES	19	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b	ENSGT00940000164687
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b	ENSGT00940000164687	ENSGT00940000157904.d #34
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142.s #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.e #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT01100000263572.a.a.a.a.a.b.d.b	ENSGT00940000164687	ENSGT00940000157904.d #34
Dolphin	MODERN SPECIES	1233															ENSTTRG00000003794 #21	BCORL1 (ENSTTRG00000003832) #22	ELF4 (ENSTTRG00000003849) #23	AIFM1 (ENSTTRG00000003869) #24	RAB33A (ENSTTRG00000003887)
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142.s #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.e #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT01100000263572.a.a.a.a.a.b.d.b	ENSGT00940000164687	ENSGT00940000157904.d #34
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796.b	ENSGT00390000008142.s #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.e #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT01100000263572.a.a.a.a.a.b.d.b	ENSGT00940000164687	ENSGT00940000157904.d #34
Narwhal	MODERN SPECIES	309	TENM1 (ENSMMNG00015018845) #9	ENSMMNG00015019048 #7	DCAF12L2 (ENSMMNG00015019063) #10	DCAF12L1 (ENSMMNG00015019080) #11	PRR32 (ENSMMNG00015019091) #12	ACTRT1 (ENSMMNG00015019112) #13	SMARCA1 (ENSMMNG00015019149) #15	ENSMMNG00015019306 #16	ENSMMNG00015019463 #16	APLN (ENSMMNG00015019483)	XPNPEP2 (ENSMMNG00015019513) #18	SASH3 (ENSMMNG00015019544) #19	ZDHHC9 (ENSMMNG00015019579) #20	ENSMMNG00015019598	ENSMMNG00015019633 #21	BCORL1 (ENSMMNG00015019732) #22	ELF4 (ENSMMNG00015019813) #23	AIFM1 (ENSMMNG00015019904) #24	RAB33A (ENSMMNG00015020024)	ZNF280C (ENSMMNG00015020045) #25	SLC25A14 (ENSMMNG00015020095) #26	GPR119 (ENSMMNG00015020135) #27	ENSMMNG00015020150 #28	ENOX2 (ENSMMNG00015020213) #29	ENSMMNG00015020346 #30	ENSMMNG00015020482	ENSMMNG00015020519	IGSF1 (ENSMMNG00015020633) #31	ENSMMNG00015020762	ENSMMNG00015020776	STK26 (ENSMMNG00015020850) #34
Beluga whale	MODERN SPECIES	83			ENSDLEG00000017937 #7	ENSDLEG00000017930 #10	ENSDLEG00000017918 #10	PRR32 (ENSDLEG00000017908) #12	SMARCA1 (ENSDLEG00000017724) #15	OCRL (ENSDLEG00000017660) #16	ENSDLEG00000017642	ENSDLEG00000017631	XPNPEP2 (ENSDLEG00000017565) #18	SASH3 (ENSDLEG00000017530) #19	ZDHHC9 (ENSDLEG00000017505) #20	ENSDLEG00000017492	ENSDLEG00000017446 #21	BCORL1 (ENSDLEG00000017364) #22	ELF4 (ENSDLEG00000017329) #23	AIFM1 (ENSDLEG00000017284) #24	RAB33A (ENSDLEG00000017271)	ZNF280C (ENSDLEG00000017223) #25
Vaquita	MODERN SPECIES	34	TENM1 (ENSPSNG00000019528) #9	ENSPSNG00000019888 #7	DCAF12L2 (ENSPSNG00000019910) #10	DCAF12L1 (ENSPSNG00000019924) #11	PRR32 (ENSPSNG00000019940) #12	ENSPSNG00000019967	ENSPSNG00000019998	SMARCA1 (ENSPSNG00000020057) #15	OCRL (ENSPSNG00000020175) #16	ENSPSNG00000020221	XPNPEP2 (ENSPSNG00000020259) #18	SASH3 (ENSPSNG00000020412) #19	ZDHHC9 (ENSPSNG00000020463) #20	ENSPSNG00000020494	ENSPSNG00000020526 #21	BCORL1 (ENSPSNG00000020696) #22	ELF4 (ENSPSNG00000020769) #23	AIFM1 (ENSPSNG00000020896) #24	RAB33A (ENSPSNG00000021088)	ZNF280C (ENSPSNG00000021118) #25	SLC25A14 (ENSPSNG00000021178) #26	GPR119 (ENSPSNG00000021286) #27	ENSPSNG00000021296 #28	ENOX2 (ENSPSNG00000021324) #29	ENSPSNG00000021389 #30	ENSPSNG00000021494	IGSF1 (ENSPSNG00000021617) #31	ENSPSNG00000021761	ENSPSNG00000021778	ENSPSNG00000021797	STK26 (ENSPSNG00000021837) #34
Sperm whale	MODERN SPECIES	13	STAG2 (ENSPCTG00005021957)	ENSPCTG00005012335	SH2D1A (ENSPCTG00005012370) #8	TENM1 (ENSPCTG00005012483) #9	ENSPCTG00005013125 #7	DCAF12L2 (ENSPCTG00005013175) #10	DCAF12L1 (ENSPCTG00005013200) #11	PRR32 (ENSPCTG00005013220) #12	SMARCA1 (ENSPCTG00005013285) #15	OCRL (ENSPCTG00005013437) #16	APLN (ENSPCTG00005013614)	XPNPEP2 (ENSPCTG00005013671) #18	SASH3 (ENSPCTG00005013747) #19	ZDHHC9 (ENSPCTG00005013890) #20	UTP14A (ENSPCTG00005013941) #21	BCORL1 (ENSPCTG00005014369) #22	ELF4 (ENSPCTG00005014414) #23	AIFM1 (ENSPCTG00005014612) #24	RAB33A (ENSPCTG00005015036)	ZNF280C (ENSPCTG00005015093) #25	SLC25A14 (ENSPCTG00005015230) #26	GPR119 (ENSPCTG00005015660) #27	RBMX2 (ENSPCTG00005015674) #28	ENOX2 (ENSPCTG00005015726) #29	ARHGAP36 (ENSPCTG00005015910) #30	ENSPCTG00005016178	IGSF1 (ENSPCTG00005016228) #31	ENSPCTG00005017158	ENSPCTG00005017709	ENSPCTG00005017763	STK26 (ENSPCTG00005017926) #34
Blue whale	MODERN SPECIES	40	ENSBMSG00010017551	SH2D1A (ENSBMSG00010017571) #8	TENM1 (ENSBMSG00010017660) #9	DCAF12L2 (ENSBMSG00010017949) #10	DCAF12L1 (ENSBMSG00010017963) #11	PRR32 (ENSBMSG00010017971) #12	SMARCA1 (ENSBMSG00010018032) #15	OCRL (ENSBMSG00010018094) #16	APLN (ENSBMSG00010018128)	XPNPEP2 (ENSBMSG00010018165) #18	SASH3 (ENSBMSG00010018297) #19	ZDHHC9 (ENSBMSG00010018334) #20	ENSBMSG00010018357	ENSBMSG00010018374	ENSBMSG00010018423 #21	BCORL1 (ENSBMSG00010018594) #22	ELF4 (ENSBMSG00010018646) #23	AIFM1 (ENSBMSG00010018761) #24	RAB33A (ENSBMSG00010018950)	ZNF280C (ENSBMSG00010018974) #25	SLC25A14 (ENSBMSG00010019050) #26	GPR119 (ENSBMSG00010019214) #27	ENSBMSG00010019230	ENOX2 (ENSBMSG00010019269) #29	ARHGAP36 (ENSBMSG00010019383) #30	ENSBMSG00010019464	ENSBMSG00010019479	ENSBMSG00010019501	IGSF1 (ENSBMSG00010019583) #31	STK26 (ENSBMSG00010019951) #34	FRMD7 (ENSBMSG00010020071) #35
Pecora	ANCESTRAL SPECIES	28	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00940000165384 #11	ENSGT00940000161322.f #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Percora_a	ANCESTRAL SPECIES	30	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00940000161322.f #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Bovidae	ANCESTRAL SPECIES	29	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00940000161322.f #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT00940000163020.cb	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Caprinae	ANCESTRAL SPECIES	44	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w.a #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a #28
Goat	MODERN SPECIES	30	SLC9A6 (ENSCHIG00000000244)	ENSCHIG00000000289	INTS6L (ENSCHIG00000000320)	ENSCHIG00000000356	ENSCHIG00000000387	PABPC5 (ENSCHIG00000019004)	PRR32 (ENSCHIG00000000458) #12	ACTRT1 (ENSCHIG00000019295) #13	SMARCA1 (ENSCHIG00000009837) #15	OCRL (ENSCHIG00000014041) #16	APLN (ENSCHIG00000016324)	ENSCHIG00000019043 #18	ZDHHC9 (ENSCHIG00000021872) #20	ENSCHIG00000025044	ENSCHIG00000010313 #21	BCORL1 (ENSCHIG00000000071) #22	NKAP (ENSCHIG00000000111)	NDUFA1 (ENSCHIG00000000140)	ENSCHIG00000018820	ENSCHIG00000000208	ENSCHIG00000000247	SOWAHD (ENSCHIG00000003539)	ZNF280C (ENSCHIG00000000349) #25	PGRMC1 (ENSCHIG00000000381)	ENSCHIG00000000419	ENSCHIG00000000454	IL13RA1 (ENSCHIG00000009933)	ENSCHIG00000009695	IL13RA2 (ENSCHIG00000013712)	LRCH2 (ENSCHIG00000015929)	PLS3 (ENSCHIG00000018693)
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020023894 #7	ENSOARG00020015761	DCAF12L2 (ENSOARG00020015781) #10	PRR32 (ENSOARG00020015805) #12	ENSOARG00020015821	ACTRT1 (ENSOARG00020015855) #13	SMARCA1 (ENSOARG00020015936) #15	OCRL (ENSOARG00020016973) #16	ENSOARG00020017716	APLN (ENSOARG00020017755)	XPNPEP2 (ENSOARG00020017807) #18	SASH3 (ENSOARG00020018137) #19	ZDHHC9 (ENSOARG00020018176) #20	ENSOARG00020018224	ENSOARG00020018278 #21	BCORL1 (ENSOARG00020018593) #22	ELF4 (ENSOARG00020018794) #23	AIFM1 (ENSOARG00020018881) #24	RAB33A (ENSOARG00020019352)	SLC25A14 (ENSOARG00020019454) #26	GPR119 (ENSOARG00020019640) #27	ENSOARG00020019657	PGRMC1 (ENSOARG00020019708)	ENSOARG00020019740	ENSOARG00020019773	LONRF3 (ENSOARG00020019823)	ENSOARG00020020488	IL13RA1 (ENSOARG00020020510)	ENSOARG00020020608	ENSOARG00020020621	ENSOARG00020020632
Bovinae	ANCESTRAL SPECIES	40	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00940000161322.f #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT00940000163020.cb	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Bos	ANCESTRAL SPECIES	39	ENSGT00940000161768.A #7	ENSGT00940000161322.e #10	ENSGT00940000161322.f.b.b #10	ENSGT00940000162120.j	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00390000002615.n	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a.a #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT00940000163020.cb	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Bos_b	ANCESTRAL SPECIES	41	ENSGT00940000161322.f.b.b #10	ENSGT00940000161322.f.b.a #10	ENSGT00390000012726 #12	ENSGT00940000162120.j	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00390000002615.n	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a.a #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT00940000163020.cb	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005003296 #10	ENSBIXG00005020075 #10	PRR32 (ENSBIXG00005020100) #12	ENSBIXG00005020132	ACTRT1 (ENSBIXG00005003305) #13	SMARCA1 (ENSBIXG00005020268) #15	OCRL (ENSBIXG00005020341) #16	ENSBIXG00005020367	ENSBIXG00005003439	XPNPEP2 (ENSBIXG00005020458) #18	ENSBIXG00005020478	SASH3 (ENSBIXG00005020501) #19	ZDHHC9 (ENSBIXG00005020566) #20	ENSBIXG00005020599	ENSBIXG00005020703 #21	BCORL1 (ENSBIXG00005020768) #22	ELF4 (ENSBIXG00005020826) #23	AIFM1 (ENSBIXG00005021020) #24	RAB33A (ENSBIXG00005021051)	ZNF280C (ENSBIXG00005003562) #25	ENSBIXG00005021115	GPR119 (ENSBIXG00005021128) #27	ENSBIXG00005021425 #26	ENSBIXG00005021498	ENSBIXG00005021549	ENOX2 (ENSBIXG00005021891) #29	ENSBIXG00005006664 #30	ENSBIXG00005022284	IGSF1 (ENSBIXG00005022762) #31	ENSBIXG00005022816	ENSBIXG00005022820
Cow	MODERN SPECIES	177	ENSBTAG00000054321 #10	ENSBTAG00000054511 #10	PRR32 (ENSBTAG00000008763) #12	ENSBTAG00000000154	ACTRT1 (ENSBTAG00000047701) #13	SMARCA1 (ENSBTAG00000002292) #15	OCRL (ENSBTAG00000018247) #16	ENSBTAG00000053073	APLN (ENSBTAG00000019993)	XPNPEP2 (ENSBTAG00000010345) #18	ENSBTAG00000026011	SASH3 (ENSBTAG00000002041) #19	ZDHHC9 (ENSBTAG00000015354) #20	ENSBTAG00000046395	UTP14A (ENSBTAG00000013671) #21	BCORL1 (ENSBTAG00000004962) #22	ELF4 (ENSBTAG00000019061) #23	AIFM1 (ENSBTAG00000006838) #24	RAB33A (ENSBTAG00000034712)	ZNF280C (ENSBTAG00000019885) #25	SLC25A14 (ENSBTAG00000016263) #26	ENSBTAG00000051880	GPR119 (ENSBTAG00000014770) #27	RBMX2 (ENSBTAG00000014771) #28	ENSBTAG00000048581	ENOX2 (ENSBTAG00000049641) #29	ARHGAP36 (ENSBTAG00000021189) #30	OR5O1 (ENSBTAG00000047994)	IGSF1 (ENSBTAG00000046476) #31	IGSF1 (ENSBTAG00000054512) #31	ENSBTAG00000048126
Bos_a	ANCESTRAL SPECIES	64	ENSGT00940000161322.f.b.b #10	ENSGT00940000161322.f.a.a #10	ENSGT00390000012726 #12	ENSGT00940000162120.j	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00960000192752	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00390000002615.n	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142.w #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.h.a.a #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT00940000163020.cb	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34
Wild yak	MODERN SPECIES	2223							OCRL (ENSBMUG00000013373) #16	ENSBMUG00000013401	APLN (ENSBMUG00000013416)	XPNPEP2 (ENSBMUG00000013499) #18	ENSBMUG00000013534	SASH3 (ENSBMUG00000013545) #19	ZDHHC9 (ENSBMUG00000013564) #20	ENSBMUG00000013574	ENSBMUG00000013622 #21	BCORL1 (ENSBMUG00000013673) #22	ELF4 (ENSBMUG00000013708) #23	AIFM1 (ENSBMUG00000013794) #24	RAB33A (ENSBMUG00000013825)	ZNF280C (ENSBMUG00000013832) #25	SLC25A14 (ENSBMUG00000013871) #26	GPR119 (ENSBMUG00000013904) #27	RBMX2 (ENSBMUG00000013912) #28
Domestic yak	DUPLICATION
Domestic yak	MODERN SPECIES	69	ENSBGRG00000009062 #10	PRR32 (ENSBGRG00000009026) #12	ENSBGRG00000009019	ACTRT1 (ENSBGRG00000008995) #13	SMARCA1 (ENSBGRG00000008343) #15	OCRL (ENSBGRG00000007993) #16	ENSBGRG00000007962	APLN (ENSBGRG00000007898)	C11orf98 (ENSBGRG00000007882)	XPNPEP2 (ENSBGRG00000007748) #18	SASH3 (ENSBGRG00000007657) #19	ZDHHC9 (ENSBGRG00000007591) #20	ENSBGRG00000007551	ENSBGRG00000007171 #21	ENSBGRG00000025880 #22	ENSBGRG00000025876 #22	ELF4 (ENSBGRG00000025869) #23	AIFM1 (ENSBGRG00000025797) #24	RAB33A (ENSBGRG00000025789)	ZNF280C (ENSBGRG00000025768) #25	SLC25A14 (ENSBGRG00000025730) #26	GPR119 (ENSBGRG00000025718) #27	ENOX2 (ENSBGRG00000025682) #29	ARHGAP36 (ENSBGRG00000025592) #30	ENSBGRG00000025565	IGSF1 (ENSBGRG00000025460) #31	ENSBGRG00000025438	ENSBGRG00000025426	OR13H1 (ENSBGRG00000025411) #32	STK26 (ENSBGRG00000025345) #34	FRMD7 (ENSBGRG00000025306) #35
Domestic yak	MODERN SPECIES	69	ENSBGRG00000009146 #10	ENSBGRG00000009062 #10	PRR32 (ENSBGRG00000009026) #12	ENSBGRG00000009019	ACTRT1 (ENSBGRG00000008995) #13	SMARCA1 (ENSBGRG00000008343) #15	OCRL (ENSBGRG00000007993) #16	ENSBGRG00000007962	APLN (ENSBGRG00000007898)	C11orf98 (ENSBGRG00000007882)	XPNPEP2 (ENSBGRG00000007748) #18	SASH3 (ENSBGRG00000007657) #19	ZDHHC9 (ENSBGRG00000007591) #20	ENSBGRG00000007551	ENSBGRG00000007171 #21	ENSBGRG00000025880 #22	ENSBGRG00000025876 #22	ELF4 (ENSBGRG00000025869) #23	AIFM1 (ENSBGRG00000025797) #24	RAB33A (ENSBGRG00000025789)	ZNF280C (ENSBGRG00000025768) #25	SLC25A14 (ENSBGRG00000025730) #26	GPR119 (ENSBGRG00000025718) #27	ENOX2 (ENSBGRG00000025682) #29	ARHGAP36 (ENSBGRG00000025592) #30	ENSBGRG00000025565	IGSF1 (ENSBGRG00000025460) #31	ENSBGRG00000025438	ENSBGRG00000025426	OR13H1 (ENSBGRG00000025411) #32	STK26 (ENSBGRG00000025345) #34
Siberian musk deer	MODERN SPECIES	274				DCAF12L1 (ENSMMSG00000007050) #11	ACTRT1 (ENSMMSG00000007059) #13	ENSMMSG00000007074	SMARCA1 (ENSMMSG00000007101) #15	OCRL (ENSMMSG00000007211) #16	ENSMMSG00000007397	APLN (ENSMMSG00000007429)	XPNPEP2 (ENSMMSG00000007456) #18	SASH3 (ENSMMSG00000007610) #19	ZDHHC9 (ENSMMSG00000007655) #20	ENSMMSG00000007693	ENSMMSG00000007729 #21	BCORL1 (ENSMMSG00000007957) #22	ELF4 (ENSMMSG00000008028) #23	AIFM1 (ENSMMSG00000008118) #24	RAB33A (ENSMMSG00000008485)	ZNF280C (ENSMMSG00000008530) #25	ENSMMSG00000008643 #26	GPR119 (ENSMMSG00000008720) #27	RBMX2 (ENSMMSG00000008730) #28	ENSMMSG00000008761	ENSMMSG00000008785	ENOX2 (ENSMMSG00000008805) #29	ARHGAP36 (ENSMMSG00000008940) #30	ENSMMSG00000009176	ENSMMSG00000009210	IGSF1 (ENSMMSG00000009279) #31	ENSMMSG00000010277
Yarkand deer	MODERN SPECIES	1323	DCAF12L2 (ENSCHYG00000024968) #10	DCAF12L1 (ENSCHYG00000024989) #11	PRR32 (ENSCHYG00000024997) #12	ENSCHYG00000025010	ENSCHYG00000025024	ACTRT1 (ENSCHYG00000025034) #13	ENSCHYG00000025048	SMARCA1 (ENSCHYG00000025080) #15	OCRL (ENSCHYG00000025407) #16	APLN (ENSCHYG00000025668)	XPNPEP2 (ENSCHYG00000025693) #18	SASH3 (ENSCHYG00000025793) #19	ZDHHC9 (ENSCHYG00000025817) #20	ENSCHYG00000025840	ENSCHYG00000025857 #21	BCORL1 (ENSCHYG00000025970) #22	ELF4 (ENSCHYG00000026023) #23	AIFM1 (ENSCHYG00000008742) #24	RAB33A (ENSCHYG00000009255)	ZNF280C (ENSCHYG00000009313) #25	RBMX2 (ENSCHYG00000009639) #28	GPR119 (ENSCHYG00000009922) #27	ENSCHYG00000009966	ENSCHYG00000010011	ENSCHYG00000010038	ENOX2 (ENSCHYG00000010109) #29	ENSCHYG00000010473	ARHGAP36 (ENSCHYG00000010501) #30	ENSCHYG00000010547	ENSCHYG00000010577	IGSF1 (ENSCHYG00000010645) #31
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000174083	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b
Carnivora	ANCESTRAL SPECIES	11	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000174083	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a
Felidae	ANCESTRAL SPECIES	12	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00930000151314	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687	ENSGT01100000263574.b.j #32
Panthera	ANCESTRAL SPECIES	33	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00930000151314	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687	ENSGT01100000263574.b.j #32
Tiger	MODERN SPECIES	222					DCAF12L2 (ENSPTIG00000002830) #10	ENSPTIG00000021437	PRR32 (ENSPTIG00000000138) #12	SMARCA1 (ENSPTIG00000000915) #15	OCRL (ENSPTIG00000007178) #16	APLN (ENSPTIG00000010122)	XPNPEP2 (ENSPTIG00000010709) #18	SASH3 (ENSPTIG00000011668) #19	ZDHHC9 (ENSPTIG00000011983) #20	ENSPTIG00000012629	ENSPTIG00000013011 #21	BCORL1 (ENSPTIG00000015033) #22	ELF4 (ENSPTIG00000015500) #23	ENSPTIG00000016655	AIFM1 (ENSPTIG00000016948) #24	RAB33A (ENSPTIG00000019544)	ZNF280C (ENSPTIG00000019810) #25	SLC25A14 (ENSPTIG00000020231) #26	GPR119 (ENSPTIG00000003840) #27	RBMX2 (ENSPTIG00000005563) #28	ENOX2 (ENSPTIG00000006087) #29	ARHGAP36 (ENSPTIG00000008958) #30	IGSF1 (ENSPTIG00000011010) #31	ENSPTIG00000004637	ENSPTIG00000004656	OR13H1 (ENSPTIG00000004670) #32	ENSPTIG00000014719
Panthera_a	ANCESTRAL SPECIES	34	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000161768.A #7	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161322 #10	ENSGT00940000165384 #11	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00930000151314	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687	ENSGT01100000263574.b.j #32
leopard	MODERN SPECIES	108					ENSPPRG00000014205	ACTRT1 (ENSPPRG00000005213) #13	ENSPPRG00000007537	SMARCA1 (ENSPPRG00000008929) #15	OCRL (ENSPPRG00000009705) #16	APLN (ENSPPRG00000009854)	XPNPEP2 (ENSPPRG00000010926) #18	SASH3 (ENSPPRG00000011451) #19	ZDHHC9 (ENSPPRG00000011725) #20	ENSPPRG00000014387	ENSPPRG00000016925 #21	BCORL1 (ENSPPRG00000021398) #22	ENSPPRG00000022357	ELF4 (ENSPPRG00000024616) #23	AIFM1 (ENSPPRG00000024316) #24	RAB33A (ENSPPRG00000023944)	ZNF280C (ENSPPRG00000023674) #25	SLC25A14 (ENSPPRG00000022780) #26	GPR119 (ENSPPRG00000014770) #27	RBMX2 (ENSPPRG00000000601) #28	ENSPPRG00000000667	ENOX2 (ENSPPRG00000001568) #29	ARHGAP36 (ENSPPRG00000002678) #30	IGSF1 (ENSPPRG00000005531) #31	ENSPPRG00000015150	ENSPPRG00000015183	OR13H1 (ENSPPRG00000015199) #32
lion	MODERN SPECIES	88	SH2D1A (ENSPLOG00000017514) #8	TENM1 (ENSPLOG00000017022) #9	ENSPLOG00000016960 #7	DCAF12L2 (ENSPLOG00000016936) #10	DCAF12L1 (ENSPLOG00000016923) #11	ENSPLOG00000016885	PRR32 (ENSPLOG00000016749) #12	SMARCA1 (ENSPLOG00000016159) #15	OCRL (ENSPLOG00000016018) #16	APLN (ENSPLOG00000015978)	XPNPEP2 (ENSPLOG00000015757) #18	SASH3 (ENSPLOG00000015719) #19	ZDHHC9 (ENSPLOG00000015636) #20	CCDC169 (ENSPLOG00000015609)	ENSPLOG00000015520 #21	BCORL1 (ENSPLOG00000015437) #22	ENSPLOG00000015389	ELF4 (ENSPLOG00000015343) #23	AIFM1 (ENSPLOG00000014773) #24	RAB33A (ENSPLOG00000014678)	ZNF280C (ENSPLOG00000014527) #25	GPR119 (ENSPLOG00000014485) #27	SLC25A14 (ENSPLOG00000014356) #26	RBMX2 (ENSPLOG00000014248) #28	ENSPLOG00000014209	ENSPLOG00000014178	ENOX2 (ENSPLOG00000012214) #29	ARHGAP36 (ENSPLOG00000011936) #30	IGSF1 (ENSPLOG00000011199) #31	ENSPLOG00000011093	ENSPLOG00000011066
Cat	MODERN SPECIES	252	ENSFCAG00000001211	DCAF12L2 (ENSFCAG00000042396) #10	DCAF12L1 (ENSFCAG00000041282) #11	PRR32 (ENSFCAG00000009525) #12	ENSFCAG00000039628	ENSFCAG00000026303	ENSFCAG00000051042	SMARCA1 (ENSFCAG00000018496) #15	OCRL (ENSFCAG00000023462) #16	APLN (ENSFCAG00000045618)	XPNPEP2 (ENSFCAG00000008070) #18	SASH3 (ENSFCAG00000005733) #19	ZDHHC9 (ENSFCAG00000025956) #20	ENSFCAG00000023451	ENSFCAG00000001798 #21	BCORL1 (ENSFCAG00000031869) #22	ELF4 (ENSFCAG00000023460) #23	ENSFCAG00000032520	AIFM1 (ENSFCAG00000008451) #24	RAB33A (ENSFCAG00000032091)	ZNF280C (ENSFCAG00000018685) #25	ENSFCAG00000050925	SLC25A14 (ENSFCAG00000008453) #26	GPR119 (ENSFCAG00000024346) #27	ENSFCAG00000027972	ENSFCAG00000032765	ENOX2 (ENSFCAG00000000734) #29	ARHGAP36 (ENSFCAG00000004377) #30	IGSF1 (ENSFCAG00000002648) #31	ENSFCAG00000030387	ENSFCAG00000024569
Caniformia	ANCESTRAL SPECIES	22	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.f.b #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000174083	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.f.b #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000174083	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a
Mustelinae	ANCESTRAL SPECIES	106							ENSGT00940000157297.f #15	ENSGT00940000157996 #16	ENSGT00390000006028 #17	ENSGT00940000154586.l	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128.b #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT01100000263574.b.j #32
American mink	MODERN SPECIES	320							SMARCA1 (ENSNVIG00000002026) #15	OCRL (ENSNVIG00000001663) #16	B2R550 (ENSNVIG00000001596) #17	ENSNVIG00000001530	XPNPEP2 (ENSNVIG00000001414) #18	SASH3 (ENSNVIG00000001332) #19	ZDHC9 (ENSNVIG00000001243) #20	ENSNVIG00000001197	UT14A (ENSNVIG00000001048) #21	BCORL1 (ENSNVIG00000000939) #22	ELF4 (ENSNVIG00000000892) #23	AIFM1 (ENSNVIG00000000697) #24	RB33A (ENSNVIG00000000653)	ZNF280C (ENSNVIG00000000556) #25	UCP5 (ENSNVIG00000000334) #26	GPR119 (ENSNVIG00000000293) #27	RBMX2 (ENSNVIG00000000266) #28	ENSNVIG00000000248	ENOX2 (ENSNVIG00000019996) #29	ARHGAP36 (ENSNVIG00000019942) #30	IGSF1 (ENSNVIG00000019773) #31	ENSNVIG00000019752
Ferret	MODERN SPECIES	521						SMARCA1 (ENSMPUG00000017423) #15	OCRL (ENSMPUG00000017424) #16	ENSMPUG00000017425	XPNPEP2 (ENSMPUG00000017426) #18	SASH3 (ENSMPUG00000017427) #19	ZDHHC9 (ENSMPUG00000017428) #20	ENSMPUG00000017429	ENSMPUG00000018986	ENSMPUG00000017436 #21	ENSMPUG00000017438	BCORL1 (ENSMPUG00000017439) #22	ELF4 (ENSMPUG00000017440) #23	ENSMPUG00000017441	AIFM1 (ENSMPUG00000017442) #24	ENSMPUG00000017443	ZNF280C (ENSMPUG00000017444) #25
Ursidae	ANCESTRAL SPECIES	33	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00390000012726 #12	ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.a	ENSGT00940000164687
Giant Panda	MODERN SPECIES	2288	SH2D1A (ENSAMEG00000015726) #8	TENM1 (ENSAMEG00000015645) #9	ENSAMEG00000027007	ENSAMEG00000025832 #7	ENSAMEG00000010565	PRR32 (ENSAMEG00000000802) #12	ENSAMEG00000011434	ACTRT1 (ENSAMEG00000020291) #13	SMARCA1 (ENSAMEG00000015218) #15	OCRL (ENSAMEG00000015161) #16	ENSAMEG00000025056	XPNPEP2 (ENSAMEG00000015089) #18	SASH3 (ENSAMEG00000015073) #19	ZDHHC9 (ENSAMEG00000015054) #20	ENSAMEG00000019842	BCORL1 (ENSAMEG00000014982) #22	ENSAMEG00000014962 #23	RAB33A (ENSAMEG00000014916)	AIFM1 (ENSAMEG00000014920) #24	ZNF280C (ENSAMEG00000014885) #25	SLC25A14 (ENSAMEG00000030105) #26	GPR119 (ENSAMEG00000014879) #27	RBMX2 (ENSAMEG00000014865) #28	ENSAMEG00000024912	ENOX2 (ENSAMEG00000014817) #29	ARHGAP36 (ENSAMEG00000014800) #30	ENSAMEG00000014798	IGSF1 (ENSAMEG00000014770) #31	ENSAMEG00000014768	ENSAMEG00000019841	ENSAMEG00000019838
Ursus	ANCESTRAL SPECIES	52																ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT00940000164687	ENSGT01100000263574.b.j.s #32	ENSGT01100000263574.b.i.b ##32
Polar bear	MODERN SPECIES	237																BCORL1 (ENSUMAG00000011790) #22	ELF4 (ENSUMAG00000011800) #23	AIFM1 (ENSUMAG00000011815) #24	RAB33A (ENSUMAG00000011821)	ZNF280C (ENSUMAG00000011824) #25	SLC25A14 (ENSUMAG00000011830) #26	GPR119 (ENSUMAG00000011834) #27	ENSUMAG00000011836	ENSUMAG00000011838	ENSUMAG00000011840	ENSUMAG00000011848	ENOX2 (ENSUMAG00000011851) #29	ARHGAP36 (ENSUMAG00000011863) #30	ENSUMAG00000011917 #31	ENSUMAG00000011926 #31	ENSUMAG00000011931
American black bear	MODERN SPECIES	5576																BCORL1 (ENSUAMG00000023200) #22
Canidae	ANCESTRAL SPECIES	37	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.f.b #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00390000002732.n.pb.b	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263574.b.i.a ##32	ENSGT00940000157904.d #34
Red fox	MODERN SPECIES	146			DCAF12L2 (ENSVVUG00000008845) #10	PRR32 (ENSVVUG00000008849) #12	ENSVVUG00000008859	ACTRT1 (ENSVVUG00000008865) #13	ENSVVUG00000008872	SMARCA1 (ENSVVUG00000008878) #15	OCRL (ENSVVUG00000008897) #16	APLN (ENSVVUG00000008912)	XPNPEP2 (ENSVVUG00000008919) #18	SASH3 (ENSVVUG00000008926) #19	ZDHHC9 (ENSVVUG00000008927) #20	ENSVVUG00000008936	UTP14A (ENSVVUG00000008939) #21	BCORL1 (ENSVVUG00000008947) #22	ELF4 (ENSVVUG00000008977) #23	ENSVVUG00000008982	AIFM1 (ENSVVUG00000008984) #24	RAB33A (ENSVVUG00000008988)	ZNF280C (ENSVVUG00000008995) #25	SLC25A14 (ENSVVUG00000009023) #26	GPR119 (ENSVVUG00000009055) #27	RBMX2 (ENSVVUG00000009059) #28	ENSVVUG00000009068	ENOX2 (ENSVVUG00000009084) #29
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A.f.b #7	ENSGT00940000161322.n #10	ENSGT01030000234626.A.b.bb.a	ENSGT00390000012726 #12	ENSGT00950000182857.a.a.b.a.r.b.g.b.b.e.a	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00940000165796	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00390000002732.n.pb.b	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00390000005922.b.d.b.a.i.b	ENSGT01100000263574.b.i.a ##32	ENSGT00940000157904.d #34
Dingo	MODERN SPECIES	347	ENSCAFG00020001845	PRR32 (ENSCAFG00020001830) #12	ENSCAFG00020001820	ENSCAFG00020001813	ACTRT1 (ENSCAFG00020001806) #13	ENSCAFG00020001796	ENSCAFG00020001783	SMARCA1 (ENSCAFG00020001751) #15	OCRL (ENSCAFG00020001626) #16	APLN (ENSCAFG00020001584)	XPNPEP2 (ENSCAFG00020001538) #18	SASH3 (ENSCAFG00020001524) #19	ZDHHC9 (ENSCAFG00020001516) #20	ENSCAFG00020001508	ENSCAFG00020001499 #21	ENSCAFG00020001479 #22	ELF4 (ENSCAFG00020001458) #23	ENSCAFG00020001440	AIFM1 (ENSCAFG00020001426) #24	RAB33A (ENSCAFG00020001403)	ZNF280C (ENSCAFG00020001255) #25	SLC25A14 (ENSCAFG00020001088) #26	GPR119 (ENSCAFG00020001070) #27	RBMX2 (ENSCAFG00020001063) #28	ENSCAFG00020001039	ENOX2 (ENSCAFG00020000943) #29	ARHGAP36 (ENSCAFG00020000912) #30	IGSF1 (ENSCAFG00020000850) #31	ENSCAFG00020000826	STK26 (ENSCAFG00020000768) #34	FRMD7 (ENSCAFG00020000739) #35
Dog	MODERN SPECIES	144	ENSCAFG00845030942 #7	ENSCAFG00845030947 #10	ENSCAFG00845030952 #10	ENSCAFG00845030957	PRR32 (ENSCAFG00845030958) #12	ENSCAFG00845030965	ENSCAFG00845030970	SMARCA1 (ENSCAFG00845030980) #15	OCRL (ENSCAFG00845030998) #16	APLN (ENSCAFG00845031008)	XPNPEP2 (ENSCAFG00845031010) #18	SASH3 (ENSCAFG00845031013) #19	ZDHHC9 (ENSCAFG00845031015) #20	ENSCAFG00845031016	ENSCAFG00845031018 #21	BCORL1 (ENSCAFG00845031020) #22	ELF4 (ENSCAFG00845031025) #23	ENSCAFG00845031027	AIFM1 (ENSCAFG00845031031) #24	RAB33A (ENSCAFG00845031035)	ZNF280C (ENSCAFG00845031036) #25	SLC25A14 (ENSCAFG00845031040) #26	GPR119 (ENSCAFG00845031046) #27	RBMX2 (ENSCAFG00845031049) #28	ENSCAFG00845031056	ENOX2 (ENSCAFG00845031064) #29	ARHGAP36 (ENSCAFG00845031067) #30	IGSF1 (ENSCAFG00845031072) #31	ENSCAFG00845031076	ENSCAFG00845031078 ##32	STK26 (ENSCAFG00845031083) #34
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b
Equus	ANCESTRAL SPECIES	39	ENSGT00940000161322.o #10	ENSGT00940000161322.p #10	ENSGT00940000153294.m.a	ENSGT00390000014818	ENSGT00390000012726 #12	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT01090000263378	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000011174.a	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472 #28	ENSGT00680000100018.a.b	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01090000260045.C.e.b	ENSGT00940000163100.a	ENSGT01100000263478.b.a.a #31	ENSGT01090000260024.A.a.b.b	ENSGT01100000263572.a.a.a.a.a.b.d.b
Donkey	MODERN SPECIES	36	ENSEASG00005030910	IDS (ENSEASG00005019569)	ENSEASG00005019572	ENSEASG00005034078	ENSEASG00005013954	ENSEASG00005034581	ENSEASG00005008218 #15	OCRL (ENSEASG00005007721) #16	ENSEASG00005007714	APLN (ENSEASG00005007713)	XPNPEP2 (ENSEASG00005007700) #18	SASH3 (ENSEASG00005037772) #19	ZDHHC9 (ENSEASG00005007690) #20	ENSEASG00005007689	ENSEASG00005007686 #21	BCORL1 (ENSEASG00005007685) #22	ELF4 (ENSEASG00005007684) #23	AIFM1 (ENSEASG00005007683) #24	RAB33A (ENSEASG00005007682)	ZNF280C (ENSEASG00005023926) #25	SLC25A14 (ENSEASG00005004425) #26	GPR119 (ENSEASG00005004418) #27	RBMX2 (ENSEASG00005004412) #28	ENSEASG00005025683	ENOX2 (ENSEASG00005028419) #29	ENSEASG00005014377 #30	ENSEASG00005014378	ENSEASG00005036286	IGSF1 (ENSEASG00005014382) #31	OR13H1 (ENSEASG00005014386) #32	STK26 (ENSEASG00005000327) #34
Horse	MODERN SPECIES	480	DCAF12L2 (ENSECAG00000030430) #10	ENSECAG00000040014	ENSECAG00000036830	PRR32 (ENSECAG00000007753) #12	ENSECAG00000057856	ACTRT1 (ENSECAG00000004310) #13	SMARCA1 (ENSECAG00000012106) #15	OCRL (ENSECAG00000010957) #16	ENSECAG00000030455	APLN (ENSECAG00000036591)	XPNPEP2 (ENSECAG00000021600) #18	SASH3 (ENSECAG00000010263) #19	ZDHHC9 (ENSECAG00000013490) #20	ENSECAG00000058008	ENSECAG00000022718 #21	BCORL1 (ENSECAG00000025037) #22	ELF4 (ENSECAG00000025149) #23	AIFM1 (ENSECAG00000001360) #24	RAB33A (ENSECAG00000016448)	ZNF280C (ENSECAG00000017572) #25	SLC25A14 (ENSECAG00000023074) #26	RBMX2 (ENSECAG00000048320) #28	FSIP2L (ENSECAG00000004409)	ENOX2 (ENSECAG00000009312) #29	ARHGAP36 (ENSECAG00000015764) #30	OR11Q2 (ENSECAG00000004483)	OR5O2P (ENSECAG00000018571)	IGSF1 (ENSECAG00000018689) #31	OR11N2 (ENSECAG00000004635)	OR5BH5 (ENSECAG00000004885)	ENSECAG00000028263
Chiroptera	ANCESTRAL SPECIES	28	ENSGT00940000155145	ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.i #28	ENSGT00890000139472.j #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Microchiroptera	ANCESTRAL SPECIES	28	ENSGT00940000155145	ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00390000012726 #12	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.i #28	ENSGT00890000139472.j #28	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263478.b.a.a #31	ENSGT00940000164687	ENSGT01100000263574.b.j #32	ENSGT00940000157904.d #34	ENSGT00940000158972 #35
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010001403	ENSRFEG00010001390	ENSRFEG00010001374	DCAF12L2 (ENSRFEG00010001361) #10	ENSRFEG00010001342	ENSRFEG00010001318	ENSRFEG00010001309	SMARCA1 (ENSRFEG00010001218) #15	OCRL (ENSRFEG00010001085) #16	APLN (ENSRFEG00010001036)	ENSRFEG00010001023	XPNPEP2 (ENSRFEG00010001006) #18	SASH3 (ENSRFEG00010000984) #19	ZDHHC9 (ENSRFEG00010000958) #20	ENSRFEG00010000929 #21	BCORL1 (ENSRFEG00010000891) #22	ELF4 (ENSRFEG00010000849) #23	AIFM1 (ENSRFEG00010000755) #24	RAB33A (ENSRFEG00010000708)	ZNF280C (ENSRFEG00010000655) #25	SLC25A14 (ENSRFEG00010000587) #26	GPR119 (ENSRFEG00010000577) #27	RBMX2 (ENSRFEG00010000565) #28	ENSRFEG00010000558	ENOX2 (ENSRFEG00010000534) #29	ARHGAP36 (ENSRFEG00010000484) #30	IGSF1 (ENSRFEG00010000369) #31	STK26 (ENSRFEG00010000239) #34	FRMD7 (ENSRFEG00010000183) #35	RAP2C (ENSRFEG00010000172) #37	MBNL3 (ENSRFEG00010000151)
Microbat	MODERN SPECIES	939	ENSMLUG00000030179	ENSMLUG00000028867 #7	ENSMLUG00000025675	DCAF12L2 (ENSMLUG00000015935) #10	ENSMLUG00000029909	ENSMLUG00000025391	ENSMLUG00000016470 #12	SMARCA1 (ENSMLUG00000029614) #15	OCRL (ENSMLUG00000015997) #16	APLN (ENSMLUG00000023749)	XPNPEP2 (ENSMLUG00000001962) #18	SASH3 (ENSMLUG00000001974) #19	ZDHHC9 (ENSMLUG00000001980) #20	ENSMLUG00000001984 #21	ENSMLUG00000028941	BCORL1 (ENSMLUG00000008944) #22	ELF4 (ENSMLUG00000012862) #23	ENSMLUG00000008966 #24	RAB33A (ENSMLUG00000009002)	SLC25A14 (ENSMLUG00000009045) #26	GPR119 (ENSMLUG00000016344) #27	ENSMLUG00000017095 #28	ENOX2 (ENSMLUG00000010026) #29	ARHGAP36 (ENSMLUG00000014175) #30	ENSMLUG00000014179 #31	ENSMLUG00000029283	ENSMLUG00000030575	OR13H1 (ENSMLUG00000007518) #32	STK26 (ENSMLUG00000001472) #34	FRMD7 (ENSMLUG00000001477) #35	RAP2C (ENSMLUG00000001480) #37
Megabat	MODERN SPECIES	6489																BCORL1 (ENSPVAG00000004411) #22	ELF4 (ENSPVAG00000004415) #23	AIFM1 (ENSPVAG00000004418) #24	RAB33A (ENSPVAG00000004420)	ZNF280C (ENSPVAG00000004421) #25	SLC25A14 (ENSPVAG00000004423) #26	GPR119 (ENSPVAG00000004424) #27	RBMX2 (ENSPVAG00000004425) #28
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153737.a #22
Hedgehog	MODERN SPECIES	26																BCORL1 (ENSEEUG00000007581) #22
Common shrew	MODERN SPECIES	7159																BCORL1 (ENSSARG00000014079) #22
Atlantogenata	ANCESTRAL SPECIES	119	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00500000045818	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.k #28
Xenarthra	ANCESTRAL SPECIES	458											ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25
Armadillo	MODERN SPECIES	2260											ENSDNOG00000040294	XPNPEP2 (ENSDNOG00000011646) #18	SASH3 (ENSDNOG00000041280) #19	ZDHHC9 (ENSDNOG00000011671) #20	ENSDNOG00000002180 #21	BCORL1 (ENSDNOG00000039387) #22	ELF4 (ENSDNOG00000042625) #23	AIFM1 (ENSDNOG00000018718) #24	RAB33A (ENSDNOG00000048455)	ZNF280C (ENSDNOG00000011446) #25	ENSDNOG00000035079
Afrotheria	ANCESTRAL SPECIES	152	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.k #28
Afrotheria_a	ANCESTRAL SPECIES	154	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000161768.A #7	ENSGT00940000161322 #10	ENSGT00940000162451 #13	ENSGT00940000157297 #15	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.g #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000162128 #25	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.k #28
Hyrax	MODERN SPECIES	7612																BCORL1 (ENSPCAG00000008768) #22	ELF4 (ENSPCAG00000008862) #23	AIFM1 (ENSPCAG00000008919) #24	RAB33A (ENSPCAG00000008986)
Elephant	MODERN SPECIES	320	STAG2 (ENSLAFG00000006860)	SH2D1A (ENSLAFG00000007985) #8	TENM1 (ENSLAFG00000007987) #9	ENSLAFG00000030159 #7	ENSLAFG00000032003 #10	ENSLAFG00000009629 #10	ENSLAFG00000029392 #13	ENSLAFG00000028410 #13	SMARCA1 (ENSLAFG00000000896) #15	OCRL (ENSLAFG00000000900) #16	APLN (ENSLAFG00000029857)	XPNPEP2 (ENSLAFG00000005326) #18	SASH3 (ENSLAFG00000005332) #19	ZDHHC9 (ENSLAFG00000005334) #20	ENSLAFG00000016653 #21	BCORL1 (ENSLAFG00000016911) #22	ENSLAFG00000027148	AIFM1 (ENSLAFG00000008831) #24	RAB33A (ENSLAFG00000008832)	ZNF280C (ENSLAFG00000010981) #25	SLC25A14 (ENSLAFG00000002284) #26	GPR119 (ENSLAFG00000002289) #27	RBMX2 (ENSLAFG00000017625) #28
Marsupialia	ANCESTRAL SPECIES	30	ENSGT00940000153773.a.b	ENSGT00940000160311.e	ENSGT00940000156123.b	ENSGT00710000106792	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT00940000157297 #15	ENSGT00940000157996.c #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.c #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT01100000263572.a.a.a.a.a.a.a	ENSGT01100000263574.b.j.a #32	ENSGT01100000263574.b.i.b ##32	ENSGT01100000263574.b.i.a ##32	ENSGT00940000157904 #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b	ENSGT01050000244897.a.b.a
Opossum	MODERN SPECIES	627	ENSMODG00000010294	LAMP2 (ENSMODG00000010311)	ENSMODG00000010345	ENSMODG00000010354	ENSMODG00000013156	ENSMODG00000047037	ENSMODG00000029692	ENSMODG00000013187 #15	ENSMODG00000013199 #16	ENSMODG00000027814	ENSMODG00000013204	XPNPEP2 (ENSMODG00000013216) #18	SASH3 (ENSMODG00000013221) #19	ZDHHC9 (ENSMODG00000013228) #20	ENSMODG00000013238 #21	BCORL1 (ENSMODG00000013250) #22	ENSMODG00000044664 #23	AIFM1 (ENSMODG00000013265) #24	RAB33A (ENSMODG00000013269)	ENOX2 (ENSMODG00000015416) #29	ENSMODG00000042220	ENSMODG00000015393 #30	ENSMODG00000015358	OR13H1 (ENSMODG00000015336) #32	ENSMODG00000015331 ##32	ENSMODG00000040315 ##32	ENSMODG00000043686 ##32	STK26 (ENSMODG00000015323) #34	FRMD7 (ENSMODG00000015320) #35	RAP2C (ENSMODG00000015308) #37	MBNL3 (ENSMODG00000015304)
Marsupialia_b	ANCESTRAL SPECIES	29	ENSGT00940000156123.b	ENSGT00710000106792.q	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT01000000214434.B.b.d	ENSGT00940000160311.f	ENSGT00940000157297 #15	ENSGT00940000157996.c #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.c #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00890000139472.m.b #28	ENSGT00680000100018.b	ENSGT00390000006788.a.a #29	ENSGT00510000047522.q	ENSGT00940000153904.b #30	ENSGT01100000263574.b.i.b ##32	ENSGT00940000157904 #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a
Diprotodontia	ANCESTRAL SPECIES	70	ENSGT00940000156123.b	ENSGT00710000106792.q	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT01000000214434.B.b.d	ENSGT00940000160311.f	ENSGT00940000157297 #15	ENSGT00940000157996.c #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.c #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00980000198742	ENSGT00390000006788.a.a #29	ENSGT00510000047522.q	ENSGT00940000153904.b #30	ENSGT01100000263574.b.i.b ##32	ENSGT00940000157904 #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b
Diprotodontia_a	ANCESTRAL SPECIES	66	ENSGT00940000156123.b	ENSGT00710000106792.q	ENSGT00940000158743	ENSGT00950000182972.a.a.a.a.a	ENSGT00940000155920 #8	ENSGT01030000234566.e.b.b.b #9	ENSGT01000000214434.B.b.d	ENSGT00940000160311.f	ENSGT00940000157297 #15	ENSGT00940000157996.c #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142.c #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00940000160863	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00980000198742	ENSGT00390000006788.a.a #29	ENSGT00510000047522.q	ENSGT00940000153904.b #30	ENSGT01100000263574.b.i.b ##32	ENSGT00940000157904 #34	ENSGT00940000158972 #35	ENSGT00940000157245 #37	ENSGT00950000182897.B.a.b.a	ENSGT00950000183071.a.b
Common wonbat	MODERN SPECIES	227										ENSVURG00010001120 #16	APLN (ENSVURG00010001067)	XPNPEP2 (ENSVURG00010001052) #18	SASH3 (ENSVURG00010001029) #19	ZDHHC9 (ENSVURG00010001014) #20	ENSVURG00010000964 #21	BCORL1 (ENSVURG00010000943) #22	ENSVURG00010000933 #23	AIFM1 (ENSVURG00010000820) #24	RAB33A (ENSVURG00010000806)	SLC25A14 (ENSVURG00010000761) #26	GPR119 (ENSVURG00010000753) #27	ENSVURG00010000733	ENSVURG00010000723
koala	MODERN SPECIES	195								ENSPCIG00000031524 #15	ENSPCIG00000015460 #15	ENSPCIG00000015412 #16	APLN (ENSPCIG00000032644)	XPNPEP2 (ENSPCIG00000015378) #18	SASH3 (ENSPCIG00000015364) #19	ZDHHC9 (ENSPCIG00000015357) #20	ENSPCIG00000015344 #21	BCORL1 (ENSPCIG00000015333) #22	ENSPCIG00000015328 #23	AIFM1 (ENSPCIG00000015319) #24	RAB33A (ENSPCIG00000015312)	SLC25A14 (ENSPCIG00000015306) #26	GPR119 (ENSPCIG00000015302) #27	ENSPCIG00000031559	ENSPCIG00000015296	ENSPCIG00000015274	ENOX2 (ENSPCIG00000015259) #29	ENSPCIG00000015269	ENSPCIG00000015252 #30	ENSPCIG00000033458	ENSPCIG00000015247 ##32	STK26 (ENSPCIG00000014584) #34	FRMD7 (ENSPCIG00000014559) #35
Wallaby	MODERN SPECIES	479																BCORL1 (ENSMEUG00000007450) #22	ENSMEUG00000007483 #23
Tasmanian devil	MODERN SPECIES	21	STAG2 (ENSSHAG00000016662)	SH2D1A (ENSSHAG00000022316) #8	ENSSHAG00000017155 #9	ENSSHAG00000028961	ENSSHAG00000018884	ENSSHAG00000028121	ENSSHAG00000023403	ENSSHAG00000020714	ENSSHAG00000013518 #15	ENSSHAG00000014095 #16	APLN (ENSSHAG00000030970)	XPNPEP2 (ENSSHAG00000014675) #18	SASH3 (ENSSHAG00000014846) #19	ZDHHC9 (ENSSHAG00000014933) #20	ENSSHAG00000015162 #21	BCORL1 (ENSSHAG00000015554) #22	ENSSHAG00000015713 #23	AIFM1 (ENSSHAG00000015997) #24	RAB33A (ENSSHAG00000031815)	SLC25A14 (ENSSHAG00000016212) #26	GPR119 (ENSSHAG00000016303) #27	ENSSHAG00000016412 #28	ENSSHAG00000016437	ENSSHAG00000029664	ENSSHAG00000016713	ENSSHAG00000004098 #29	ENSSHAG00000007369	ENSSHAG00000009553 #30	ENSSHAG00000010564	ENSSHAG00000010927	ENSSHAG00000011109
Platypus	MODERN SPECIES	17	ENSOANG00000002951	CITED1 (ENSOANG00000002950)	ENSOANG00000002949	NHSL2 (ENSOANG00000045462)	ENSOANG00000014709	ERCC6L (ENSOANG00000014708)	TSC22D3 (ENSOANG00000037542)	ENSOANG00000049514	MID2 (ENSOANG00000014706)	OCRL (ENSOANG00000012031) #16	ENSOANG00000042145	XPNPEP2 (ENSOANG00000013312) #18	SASH3 (ENSOANG00000014543) #19	ZDHHC9 (ENSOANG00000007237) #20	ENSOANG00000013483 #21	BCORL1 (ENSOANG00000012035) #22	ENSOANG00000046823	ENSOANG00000003034	ENSOANG00000000356	ENSOANG00000043763 #32	ENSOANG00000046749	ENSOANG00000036091	SEPHS2 (ENSOANG00000050756)	IKBKG (ENSOANG00000000364)	G6PD (ENSOANG00000000365)	ENSOANG00000000366	ENSOANG00000011544	FAM3A (ENSOANG00000047703)	SLC10A3 (ENSOANG00000043297)	UBL4A (ENSOANG00000048880)	PLXNA3 (ENSOANG00000007979)
Sauria	ANCESTRAL SPECIES	35	ENSGT00940000163305.a.b	ENSGT00940000156837	ENSGT00510000047029	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000156656	ENSGT00940000165959	ENSGT00390000005569	ENSGT00530000063624.B	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29
Lepidosauria	ANCESTRAL SPECIES	41	ENSGT00390000012647	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29
Episquamata	ANCESTRAL SPECIES	14	ENSGT00390000012647	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00510000047029	ENSGT00390000008751.b	ENSGT00940000161656	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a
Toxicofera	ANCESTRAL SPECIES	17	ENSGT00390000012647	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00510000047029	ENSGT00390000008751.b	ENSGT00940000161656	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	14	ENSGT00390000012647	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000157996 #16	ENSGT01010000223272	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00510000047029	ENSGT00390000008751.b	ENSGT00940000161656	ENSGT00940000158469.j	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a
Indian cobra	MODERN SPECIES	13	FUNDC2 (ENSNNAG00000012248)	CMC4 (ENSNNAG00000012270)	ENSNNAG00000012311	BRCC3 (ENSNNAG00000012319)	ENSNNAG00000012332	FAAH2 (ENSNNAG00000012349)	CLIC2 (ENSNNAG00000012471)	NHSL2 (ENSNNAG00000012513)	MID2 (ENSNNAG00000012670)	OCRL (ENSNNAG00000012732) #16	ENSNNAG00000013136	XPNPEP2 (ENSNNAG00000013168) #18	SASH3 (ENSNNAG00000013250) #19	ZDHHC9 (ENSNNAG00000013273) #20	ENSNNAG00000013312 #21	ENSNNAG00000013345 #22	AIFM1 (ENSNNAG00000013390) #24	MARS2 (ENSNNAG00000013910)	RAB33A (ENSNNAG00000013919)	RBMX2 (ENSNNAG00000013926) #28	SLC25A14 (ENSNNAG00000013939) #26	GPR119 (ENSNNAG00000013976) #27	ENOX2 (ENSNNAG00000013982) #29	PIN4 (ENSNNAG00000014017)	GLA (ENSNNAG00000014025)	ENSNNAG00000014039	BTK (ENSNNAG00000014057)	TIMM8A (ENSNNAG00000014124)	ENSNNAG00000014131	TAF7 (ENSNNAG00000014155)	ENSNNAG00000014186
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000153737.a.a #22
Blue-lipped sea krait	MODERN SPECIES	3041															ENSLLTG00000011141 #22	ENSLLTG00000011126 #22
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000153737.a.b #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000153737.a.b #22
Blue-lipped sea krait	MODERN SPECIES	3041																ENSLLTG00000011141 #22	ENSLLTG00000011126 #22
Lizard	MODERN SPECIES	1063								ENSACAG00000028500	ENSACAG00000001445	OCRL (ENSACAG00000000936) #16	APLN (ENSACAG00000037506)	XPNPEP2 (ENSACAG00000009224) #18	SASH3 (ENSACAG00000009197) #19	ZDHHC9 (ENSACAG00000009139) #20	ENSACAG00000009064 #21	BCORL1 (ENSACAG00000009024) #22	AIFM1 (ENSACAG00000008867) #24	ENSACAG00000008856	RAB33A (ENSACAG00000045247)	RBMX2 (ENSACAG00000008819) #28	ENSACAG00000008749 #26	GPR119 (ENSACAG00000008748) #27	ENSACAG00000008657 #29	ENSACAG00000008537	ENSACAG00000008503	BTK (ENSACAG00000008298)	TIMM8A (ENSACAG00000008289)	ENSACAG00000037924	ENSACAG00000008203	ENSACAG00000008153	DRP2 (ENSACAG00000008061)
Laterata	ANCESTRAL SPECIES	32	ENSGT00390000012647	ENSGT00390000006885	ENSGT00390000000360	ENSGT00530000063484.b.a	ENSGT00940000162502	ENSGT00940000161397	ENSGT00940000163305.a.b	ENSGT00950000182963.b.b	ENSGT00940000159460	ENSGT00940000157996 #16	ENSGT01010000223272	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00510000047029	ENSGT00390000008751.b	ENSGT00390000018085.b	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a
Common wall lizard	MODERN SPECIES	419	ENSPMRG00000020541	ENSPMRG00000020547	ENSPMRG00000020551	FAAH2 (ENSPMRG00000020556)	CLIC2 (ENSPMRG00000020575)	ENSPMRG00000020591	NHSL2 (ENSPMRG00000020600)	ENSPMRG00000020624	MID2 (ENSPMRG00000020630)	OCRL (ENSPMRG00000020654) #16	ENSPMRG00000020742	XPNPEP2 (ENSPMRG00000020756) #18	SASH3 (ENSPMRG00000020767) #19	ZDHHC9 (ENSPMRG00000020771) #20	ENSPMRG00000020780 #21	BCORL1 (ENSPMRG00000020787) #22	AIFM1 (ENSPMRG00000020802) #24	MARS2 (ENSPMRG00000020829)	RAB33A (ENSPMRG00000018962)	SLC25A14 (ENSPMRG00000018978) #26	ENSPMRG00000019002 #27	ENSPMRG00000019010 #27	ENSPMRG00000019023 #29	ENSPMRG00000019033 #29	PIN4 (ENSPMRG00000019039)	GLA (ENSPMRG00000019042)	ENSPMRG00000019046	BTK (ENSPMRG00000019051)	TIMM8A (ENSPMRG00000019057)	ENSPMRG00000019058	ENSPMRG00000019065
Argentine black and white tegu	MODERN SPECIES	61	FUNDC2 (ENSSMRG00000013161)	CMC4 (ENSSMRG00000013162)	ENSSMRG00000013163	BRCC3 (ENSSMRG00000013164)	FAAH2 (ENSSMRG00000013165)	CLIC2 (ENSSMRG00000013167)	ENSSMRG00000013168	NHSL2 (ENSSMRG00000013169)	MID2 (ENSSMRG00000013170)	OCRL (ENSSMRG00000013172) #16	ENSSMRG00000013173	XPNPEP2 (ENSSMRG00000013174) #18	SASH3 (ENSSMRG00000013175) #19	ZDHHC9 (ENSSMRG00000013176) #20	ENSSMRG00000013177 #21	BCORL1 (ENSSMRG00000013178) #22	AIFM1 (ENSSMRG00000013179) #24	MARS2 (ENSSMRG00000013180)	RAB33A (ENSSMRG00000013181)	RBMX2 (ENSSMRG00000013182) #28	SLC25A14 (ENSSMRG00000013183) #26	GPR119 (ENSSMRG00000013184) #27	ENOX2 (ENSSMRG00000013185) #29	PIN4 (ENSSMRG00000013186)	GLA (ENSSMRG00000013187)	RPL36A (ENSSMRG00000013191)	BTK (ENSSMRG00000013192)	TIMM8A (ENSSMRG00000013193)	ENSSMRG00000013194	TAF7 (ENSSMRG00000013195)	ENSSMRG00000013196
tuatara	MODERN SPECIES	1596																BCORL1 (ENSSPUG00000005508) #22	AIFM1 (ENSSPUG00000005531) #24	ENSSPUG00000005555 #24	MARS2 (ENSSPUG00000005569)	RAB33A (ENSSPUG00000005574)	ENSSPUG00000005578	SLC25A14 (ENSSPUG00000005586) #26	ENSSPUG00000005600	GLOD5 (ENSSPUG00000005659)	ENOX2 (ENSSPUG00000005666) #29	GPR119 (ENSSPUG00000005701) #27	ENSSPUG00000005710	ENSSPUG00000005716	NSDHL (ENSSPUG00000005730)	ENSSPUG00000005744	VAMP7 (ENSSPUG00000005776)
Archelosauria	ANCESTRAL SPECIES	37	ENSGT00940000157843	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00940000165959	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30
Cryptodira	ANCESTRAL SPECIES	78						ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30
Testudinoidea	ANCESTRAL SPECIES	9	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00680000100018.b	ENSGT00940000165959	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000157209.ib.b	ENSGT00390000003706.a.b.a	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000166719	ENSGT00940000163673
Emydidae	ANCESTRAL SPECIES	75							ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000157209.ib.b	ENSGT00390000003706.a.b.a	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000166719	ENSGT00940000163673
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	966				NHSL2 (ENSCPBG00000011951)	PIN4 (ENSCPBG00000011960)	ERCC6L (ENSCPBG00000011965)	OCRL (ENSCPBG00000011986) #16	APLN (ENSCPBG00000011991)	ENSCPBG00000011992 #18	ENSCPBG00000011995 #18	ENSCPBG00000012001	SASH3 (ENSCPBG00000012005) #19	ENSCPBG00000012007	ZDHHC9 (ENSCPBG00000012010) #20	ENSCPBG00000012018 #21	ENSCPBG00000012021 #22	ENSCPBG00000012027 #22	ELF4 (ENSCPBG00000012030) #23	AIFM1 (ENSCPBG00000012035) #24	MARS2 (ENSCPBG00000012041)	RAB33A (ENSCPBG00000012042)	RBMX2 (ENSCPBG00000012045) #28	SLC25A14 (ENSCPBG00000012048) #26	GPR119 (ENSCPBG00000012050) #27
painted turtle	MODERN SPECIES	966			NHSL2 (ENSCPBG00000011951)	PIN4 (ENSCPBG00000011960)	ERCC6L (ENSCPBG00000011965)	OCRL (ENSCPBG00000011986) #16	APLN (ENSCPBG00000011991)	ENSCPBG00000011992 #18	ENSCPBG00000011995 #18	ENSCPBG00000012001	SASH3 (ENSCPBG00000012005) #19	ENSCPBG00000012007	ZDHHC9 (ENSCPBG00000012010) #20	ENSCPBG00000012018 #21	ENSCPBG00000012021 #22	ENSCPBG00000012027 #22	ELF4 (ENSCPBG00000012030) #23	AIFM1 (ENSCPBG00000012035) #24	MARS2 (ENSCPBG00000012041)	RAB33A (ENSCPBG00000012042)	RBMX2 (ENSCPBG00000012045) #28	SLC25A14 (ENSCPBG00000012048) #26	GPR119 (ENSCPBG00000012050) #27
Three-toed box turtle	MODERN SPECIES	64							NHSL2 (ENSTMTG00000008464)	PIN4 (ENSTMTG00000008449)	ERCC6L (ENSTMTG00000008438)	OCRL (ENSTMTG00000008336) #16	APLN (ENSTMTG00000008322)	XPNPEP2 (ENSTMTG00000008261) #18	SASH3 (ENSTMTG00000008238) #19	ZDHHC9 (ENSTMTG00000008212) #20	ENSTMTG00000008185 #21	BCORL1 (ENSTMTG00000008116) #22	ELF4 (ENSTMTG00000008072) #23	AIFM1 (ENSTMTG00000008049) #24	MARS2 (ENSTMTG00000008038)	RAB33A (ENSTMTG00000008023)	RBMX2 (ENSTMTG00000007999) #28	SLC25A14 (ENSTMTG00000007975) #26	GPR119 (ENSTMTG00000007968) #27	ENOX2 (ENSTMTG00000007942) #29	ENSTMTG00000007893 #30	ENSTMTG00000007828	ENSTMTG00000007813	ENSTMTG00000007716	GLOD5 (ENSTMTG00000007581)	ENSTMTG00000003783	ENSTMTG00000003490
Testudinidae	ANCESTRAL SPECIES	7	ENSGT00530000063624.B	ENSGT00390000005569	ENSGT00680000100018.b	ENSGT00940000165959	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029.lb	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000161870 #23	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000157209.ib.b	ENSGT00390000003706.a.b.a	ENSGT00390000015700.b	ENSGT00940000153941.a.b	ENSGT00940000166719	ENSGT00940000163673
Goode s thornscrub tortoise	MODERN SPECIES	23	ENSGEVG00005011050	TSC22D3 (ENSGEVG00005011470)	MID2 (ENSGEVG00005011510)	ENSGEVG00005011656	ENSGEVG00005011663	ENSGEVG00005011711	NHSL2 (ENSGEVG00005011745)	PIN4 (ENSGEVG00005011770)	ERCC6L (ENSGEVG00005011791)	OCRL (ENSGEVG00005011844) #16	APLN (ENSGEVG00005011967)	XPNPEP2 (ENSGEVG00005012005) #18	SASH3 (ENSGEVG00005012169) #19	ZDHHC9 (ENSGEVG00005012209) #20	ENSGEVG00005012258 #21	BCORL1 (ENSGEVG00005012296) #22	ELF4 (ENSGEVG00005012384) #23	AIFM1 (ENSGEVG00005012404) #24	MARS2 (ENSGEVG00005012440)	RAB33A (ENSGEVG00005012508)	RBMX2 (ENSGEVG00005012527) #28	SLC25A14 (ENSGEVG00005012552) #26	GPR119 (ENSGEVG00005012577) #27	ENOX2 (ENSGEVG00005012606) #29	ENSGEVG00005012693 #30	ENSGEVG00005012946	ENSGEVG00005013058	ENSGEVG00005013117	GLOD5 (ENSGEVG00005009227)	ENSGEVG00005009431	ENSGEVG00005010694
Abingdon island giant tortoise	MODERN SPECIES	84													SASH3 (ENSCABG00000022498) #19	ZDHHC9 (ENSCABG00000022499) #20	ENSCABG00000022500 #21	BCORL1 (ENSCABG00000022501) #22	ELF4 (ENSCABG00000022502) #23	AIFM1 (ENSCABG00000022503) #24	ENSCABG00000022504	MARS2 (ENSCABG00000022506)	RAB33A (ENSCABG00000022509)	RBMX2 (ENSCABG00000022510) #28	SLC25A14 (ENSCABG00000022512) #26	GPR119 (ENSCABG00000022513) #27	ENOX2 (ENSCABG00000022514) #29	ENSCABG00000022515 #30	ENSCABG00000022518	ENSCABG00000022519
Chinese turtle	MODERN SPECIES	687																BCORL1 (ENSPSIG00000005811) #22	ENSPSIG00000006061	AIFM1 (ENSPSIG00000006104) #24	MARS2 (ENSPSIG00000009657)	RBMX2 (ENSPSIG00000009737) #28	SLC25A14 (ENSPSIG00000009864) #26	GPR119 (ENSPSIG00000000356) #27	ENOX2 (ENSPSIG00000010672) #29	ENSPSIG00000012068	ENSPSIG00000012122	ENSPSIG00000012365	ENSPSIG00000012621	ENSPSIG00000012814	CLCN5 (ENSPSIG00000012870)	ENSPSIG00000013404	ENSPSIG00000013416
Archosauria	ANCESTRAL SPECIES	69					ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30
Australian saltwater crocodile	MODERN SPECIES	36	ENSCPRG00005009515	PLP1 (ENSCPRG00005009503)	RAB9B (ENSCPRG00005009500)	ENSCPRG00005009498	SLC25A53 (ENSCPRG00005009497)	ENSCPRG00005009495	ENSCPRG00005009492	PIN4 (ENSCPRG00005009487)	ERCC6L (ENSCPRG00005009483)	OCRL (ENSCPRG00005009428) #16	APLN (ENSCPRG00005009422)	XPNPEP2 (ENSCPRG00005009416) #18	SASH3 (ENSCPRG00005009413) #19	ZDHHC9 (ENSCPRG00005009398) #20	ENSCPRG00005009391 #21	BCORL1 (ENSCPRG00005009384) #22	CHMP1B (ENSCPRG00005009380)	TBX22 (ENSCPRG00005009370)	ITM2A (ENSCPRG00005009366)	ENSCPRG00005009361	ENSCPRG00005009356	ENSCPRG00005009351	LPAR4 (ENSCPRG00005009346)	ENSCPRG00005009341	CYSLTR1 (ENSCPRG00005009335)	ENSCPRG00005009310	ENSCPRG00005009301	TAF9 (ENSCPRG00005009296)	KIF4A (ENSCPRG00005009202)	PDZD11 (ENSCPRG00005009175)	ENSCPRG00005009164
Aves	ANCESTRAL SPECIES	53	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01070000253816.a.a.a
African ostrich	MODERN SPECIES	542				TSC22D3 (ENSSCUG00000006247)	ENSSCUG00000006243	MID2 (ENSSCUG00000006239)	NHSL2 (ENSSCUG00000006236)	PIN4 (ENSSCUG00000006234)	ERCC6L (ENSSCUG00000006226)	APLN (ENSSCUG00000006187)	XPNPEP2 (ENSSCUG00000006173) #18	SASH3 (ENSSCUG00000006156) #19	ZDHHC9 (ENSSCUG00000006148) #20	ENSSCUG00000006143 #21	ENSSCUG00000006138	BCORL1 (ENSSCUG00000006134) #22	AIFM1 (ENSSCUG00000006129) #24	MARS2 (ENSSCUG00000006127)	RAB33A (ENSSCUG00000006125)	RBMX2 (ENSSCUG00000006123) #28	SLC25A14 (ENSSCUG00000006120) #26	GPR119 (ENSSCUG00000006117) #27	ENOX2 (ENSSCUG00000006112) #29	ENSSCUG00000006106 #30	CLCN5 (ENSSCUG00000006103)	ENSSCUG00000006100
Neognathae	ANCESTRAL SPECIES	43	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.a.a #18	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01070000253816.a.a.a
Neognathae_b	ANCESTRAL SPECIES		ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01040000244068	ENSGT00940000173950	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a
Passeriformes	ANCESTRAL SPECIES	30	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT01010000223486	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01040000244068	ENSGT00940000173950	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a
Great tit	MODERN SPECIES	24	ENSPMJG00000012307	ENSPMJG00000012308	CLIC2 (ENSPMJG00000012309)	FAAH2 (ENSPMJG00000012311)	TSC22D3 (ENSPMJG00000012313)	ENSPMJG00000012315	NHSL2 (ENSPMJG00000012317)	ERCC6L (ENSPMJG00000012318)	ENSPMJG00000012319	OCRL (ENSPMJG00000012320) #16	ENSPMJG00000012321	XPNPEP2 (ENSPMJG00000012322) #18	SASH3 (ENSPMJG00000012323) #19	ZDHHC9 (ENSPMJG00000012324) #20	ENSPMJG00000012325 #21	BCORL1 (ENSPMJG00000012326) #22	AIFM1 (ENSPMJG00000012328) #24	ENSPMJG00000012395	MARS2 (ENSPMJG00000012396)	RAB33A (ENSPMJG00000012397)	ENSPMJG00000012398	ENSPMJG00000012399 #26	GPR119 (ENSPMJG00000012401) #27	ENOX2 (ENSPMJG00000012402) #29	ENSPMJG00000012404 #30	CLCN5 (ENSPMJG00000012408)	ENSPMJG00000012410	ENSPMJG00000012413	TMLHE (ENSPMJG00000012415)	SPRY3 (ENSPMJG00000012417)
Passeriformes_d	ANCESTRAL SPECIES	31	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT01010000223486	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01040000244068	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a	ENSGT00550000075160
Flycatcher	MODERN SPECIES	23	ENSFALG00000011907	ENSFALG00000011899	CLIC2 (ENSFALG00000028179)	ENSFALG00000027784	ENSFALG00000024783	ENSFALG00000026828	ENSFALG00000011839	NHSL2 (ENSFALG00000028263)	ENSFALG00000026660	ERCC6L (ENSFALG00000011797)	OCRL (ENSFALG00000011786) #16	XPNPEP2 (ENSFALG00000011752) #18	SASH3 (ENSFALG00000011731) #19	ENSFALG00000011706 #20	ENSFALG00000011665 #21	ENSFALG00000023377 #22	AIFM1 (ENSFALG00000011607) #24	ENSFALG00000011592	RAB33A (ENSFALG00000011581)	ENSFALG00000011551 #28	ENSFALG00000011540 #27	ENSFALG00000011529 #29	ENSFALG00000023854	ENSFALG00000025048	ENSFALG00000011510	ENSFALG00000011502	ENSFALG00000027251	ENSFALG00000025631	ENSFALG00000011498	TMLHE (ENSFALG00000011491)	ENSFALG00000023744
Passeriformes_g	ANCESTRAL SPECIES	23	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT01010000223486	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01040000244068	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a	ENSGT00550000075160
Passeroidea	ANCESTRAL SPECIES	25	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT01010000223486	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01070000253816.a.a.a	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a	ENSGT00550000075160
Zebra finch	MODERN SPECIES	26	ENSTGUG00000004916	ENSTGUG00000004918	CLIC2 (ENSTGUG00000004925)	FAAH2 (ENSTGUG00000004933)	TSC22D3 (ENSTGUG00000019242)	MID2 (ENSTGUG00000004946)	NHSL2 (ENSTGUG00000020851)	PIN4 (ENSTGUG00000004983)	ERCC6L (ENSTGUG00000004992)	OCRL (ENSTGUG00000004995) #16	ENSTGUG00000021007	XPNPEP2 (ENSTGUG00000005061) #18	SASH3 (ENSTGUG00000005127) #19	ZDHHC9 (ENSTGUG00000025832) #20	ENSTGUG00000005130 #21	BCORL1 (ENSTGUG00000020838) #22	AIFM1 (ENSTGUG00000005167) #24	MARS2 (ENSTGUG00000005225)	RAB33A (ENSTGUG00000005228)	ENSTGUG00000005239	SLC25A14 (ENSTGUG00000005241) #26	GPR119 (ENSTGUG00000018290) #27	ENOX2 (ENSTGUG00000005267) #29	ENSTGUG00000005313 #30	ENSTGUG00000004980	ENSTGUG00000020814	ENSTGUG00000021485	ENSTGUG00000005395	ENSTGUG00000028678	ENSTGUG00000018792	ENSTGUG00000023728
Common canary	MODERN SPECIES	13	ENSSCAG00000015900	ENSSCAG00000015904	CLIC2 (ENSSCAG00000015914)	FAAH2 (ENSSCAG00000015920)	TSC22D3 (ENSSCAG00000015927)	MID2 (ENSSCAG00000015931)	NHSL2 (ENSSCAG00000015933)	ENSSCAG00000015934	ERCC6L (ENSSCAG00000015935)	OCRL (ENSSCAG00000015941) #16	ENSSCAG00000015946	XPNPEP2 (ENSSCAG00000015949) #18	SASH3 (ENSSCAG00000015953) #19	ZDHHC9 (ENSSCAG00000015961) #20	ENSSCAG00000015973 #21	BCORL1 (ENSSCAG00000015979) #22	AIFM1 (ENSSCAG00000015982) #24	MARS2 (ENSSCAG00000015984)	RAB33A (ENSSCAG00000015985)	RBMX2 (ENSSCAG00000015986) #28	SLC25A14 (ENSSCAG00000015989) #26	GPR119 (ENSSCAG00000015993) #27	ENOX2 (ENSSCAG00000015997) #29	ENSSCAG00000016003 #30	ENSSCAG00000016007	CLCN5 (ENSSCAG00000016022)	ENSSCAG00000016035	ENSSCAG00000016042	TMLHE (ENSSCAG00000016044)	SPRY3 (ENSSCAG00000016048)	ENSSCAG00000016053
Medium ground finch	MODERN SPECIES	207	BMP15 (ENSGFOG00000010506)	ENSGFOG00000010505	ENSGFOG00000009859	ENSGFOG00000009797	CLIC2 (ENSGFOG00000009791)	FAAH2 (ENSGFOG00000009781)	TSC22D3 (ENSGFOG00000009772)	NHSL2 (ENSGFOG00000009734)	PIN4 (ENSGFOG00000009727)	ERCC6L (ENSGFOG00000009722)	OCRL (ENSGFOG00000009692) #16	XPNPEP2 (ENSGFOG00000009669) #18	SASH3 (ENSGFOG00000009662) #19	ZDHHC9 (ENSGFOG00000009657) #20	ENSGFOG00000009242 #21	BCORL1 (ENSGFOG00000009217) #22	AIFM1 (ENSGFOG00000007687) #24	RAB33A (ENSGFOG00000007600)	RBMX2 (ENSGFOG00000007595) #28	SLC25A14 (ENSGFOG00000007592) #26	GPR119 (ENSGFOG00000009498) #27	ENOX2 (ENSGFOG00000009485) #29	ENSGFOG00000009473 #30	CLCN5 (ENSGFOG00000009459)	ENSGFOG00000009449	TMLHE (ENSGFOG00000009436)	ENSGFOG00000009427	POLR1D (ENSGFOG00000009425)	VAMP7 (ENSGFOG00000009418)	ENSGFOG00000009410	NSDHL (ENSGFOG00000009399)
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT01060000248564.b.b #27	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01070000253816.a.a.a	ENSGT00940000173950	ENSGT00530000063582.a	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT01100000263512.a.a.a.a
Kakapo	MODERN SPECIES	1	ENSSHBG00005015319	CLIC2 (ENSSHBG00005015331)	ENSSHBG00005015340	FAAH2 (ENSSHBG00005015351)	TSC22D3 (ENSSHBG00005015369)	MID2 (ENSSHBG00005015376)	NHSL2 (ENSSHBG00005015388)	PIN4 (ENSSHBG00005015400)	ERCC6L (ENSSHBG00005015409)	OCRL (ENSSHBG00005015422) #16	ENSSHBG00005015624 #18	ENSSHBG00005015636 #18	SASH3 (ENSSHBG00005015650) #19	ZDHHC9 (ENSSHBG00005015661) #20	ENSSHBG00005015682 #21	BCORL1 (ENSSHBG00005015708) #22	AIFM1 (ENSSHBG00005015724) #24	MARS2 (ENSSHBG00005015746)	RAB33A (ENSSHBG00005015752)	RBMX2 (ENSSHBG00005015755) #28	SLC25A14 (ENSSHBG00005015761) #26	ENOX2 (ENSSHBG00005015764) #29	ENSSHBG00005015772 #30	ENSSHBG00005015782	CLCN5 (ENSSHBG00005015794)	ENSSHBG00005015799	TMLHE (ENSSHBG00005000612)	SPRY3 (ENSSHBG00005000614)	ENSSHBG00005000616	ENSSHBG00005000617	ENSSHBG00005000618
Golden eagle	MODERN SPECIES	13	ENSACCG00020008081	ENSACCG00020008070	CLIC2 (ENSACCG00020008060)	FAAH2 (ENSACCG00020008047)	TSC22D3 (ENSACCG00020008038)	MID2 (ENSACCG00020008030)	NHSL2 (ENSACCG00020008013)	PIN4 (ENSACCG00020007996)	ERCC6L (ENSACCG00020007987)	OCRL (ENSACCG00020007957) #16	APLN (ENSACCG00020007932)	XPNPEP2 (ENSACCG00020007917) #18	SASH3 (ENSACCG00020007901) #19	ZDHHC9 (ENSACCG00020007884) #20	ENSACCG00020007865 #21	BCORL1 (ENSACCG00020007851) #22	AIFM1 (ENSACCG00020007828) #24	MARS2 (ENSACCG00020007793)	RBMX2 (ENSACCG00020007743) #28	SLC25A14 (ENSACCG00020007727) #26	GPR119 (ENSACCG00020007718) #27	ENOX2 (ENSACCG00020007695) #29	ENSACCG00020007661 #30	ENSACCG00020007639	CLCN5 (ENSACCG00020007611)	ENSACCG00020007589	ENSACCG00020007570	ENSACCG00020007555	TMLHE (ENSACCG00020007536)	SPRY3 (ENSACCG00020007532)	ENSACCG00020007522
Galloanserae	DUPLICATION
Galloanserae	ANCESTRAL SPECIES	43	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.a.a #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a.e #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00940000153904.b #30	ENSGT00940000153763.a	ENSGT01070000253816.a.a.a
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.a.a #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a.e #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00940000160863	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00950000182832.D.b	ENSGT00940000161206	ENSGT00950000183115.b.b	ENSGT01100000263536.A.a.b	ENSGT01100000263536.A.a.a.c	ENSGT01100000263536.A.a.a.d	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b
Phasianidae_b	ANCESTRAL SPECIES	24	ENSGT00940000160459	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196.a.a #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a.e #22	ENSGT00940000156455 #24	ENSGT00550000075136	ENSGT00890000139472 #28	ENSGT00940000159471 #26	ENSGT00390000006788.a.a #29	ENSGT00950000182832.D.b	ENSGT00940000161206	ENSGT00950000183115.b.b	ENSGT01100000263536.A.a.b	ENSGT01100000263536.A.a.a.c	ENSGT01100000263536.A.a.a.d	ENSGT01040000240444.A.a.a.a.b	ENSGT01050000245003	ENSGT01100000263536.B.c.b	ENSGT00940000163592
Chicken	MODERN SPECIES	33	CLIC2 (ENSGALG00010015145)	ENSGALG00010015110	ENSGALG00010015108	TSC22D4 (ENSGALG00010014603)	ENSGALG00010014578	MID2 (ENSGALG00010015498)	NHSL2 (ENSGALG00010015171)	PIN4 (ENSGALG00010015158)	ERCC6L (ENSGALG00010015153)	OCRL (ENSGALG00010015128) #16	APLN (ENSGALG00010014943)	XPNPEP2 (ENSGALG00010014882) #18	SASH3 (ENSGALG00010014813) #19	ZDHHC9 (ENSGALG00010014797) #20	ENSGALG00010014783 #21	BCORL1 (ENSGALG00010016615) #22	AIFM1 (ENSGALG00010016598) #24	MARS2 (ENSGALG00010016580)	RAB33A (ENSGALG00010016572) #28	SLC25A14 (ENSGALG00010016553) #26	ENOX2 (ENSGALG00010016542) #29	CHMP1B (ENSGALG00010016520)	TBX22 (ENSGALG00010014222)	ITM2A (ENSGALG00010018035)	GPR174 (ENSGALG00010017999)	ENSGALG00010017979	ENSGALG00010017992	LPAR4 (ENSGALG00010017963)	ENSGALG00010017903	CYSLTR1 (ENSGALG00010017860)	ENSGALG00010017803
Turkey	MODERN SPECIES	29	CYSLTR1 (ENSMGAG00000015791)	ITM2A (ENSMGAG00000001684)	ENSMGAG00000015800	ENSMGAG00000017838	ENSMGAG00000015798	ENSMGAG00000015795	ENSMGAG00000001711	ENSMGAG00000001700	ENSMGAG00000001738 #29	ENSMGAG00000001780 #26	ENSMGAG00000015802 #27	ENSMGAG00000001801	ENSMGAG00000001808	ENSMGAG00000001828	ENSMGAG00000001848 #24	ENSMGAG00000001881 #22	ENSMGAG00000001916 #21	ENSMGAG00000001979 #19	ENSMGAG00000001953 #20	ENSMGAG00000002018 #16	ENSMGAG00000022990	ENSMGAG00000020232	ENSMGAG00000002094	ENSMGAG00000002096	ENSMGAG00000020199	ENSMGAG00000018542	ENSMGAG00000017429	ENSMGAG00000016264	ENSMGAG00000016690	ENSMGAG00000002159	ENSMGAG00000002151
Japanese quail	MODERN SPECIES	22	ENSCJPG00005005742	ENSCJPG00005005596	CLIC2 (ENSCJPG00005005592)	FAAH2 (ENSCJPG00005005575)	ENSCJPG00005005574	TSC22D3 (ENSCJPG00005005573)	MID2 (ENSCJPG00005005485)	NHSL2 (ENSCJPG00005005468)	PIN4 (ENSCJPG00005005465)	ERCC6L (ENSCJPG00005005464)	OCRL (ENSCJPG00005004923) #16	APLN (ENSCJPG00005004921)	SASH3 (ENSCJPG00005004900) #19	ZDHHC9 (ENSCJPG00005004867) #20	ENSCJPG00005004602 #21	ENSCJPG00005004578 #22	AIFM1 (ENSCJPG00005003855) #24	MARS2 (ENSCJPG00005003851)	RBMX2 (ENSCJPG00005003850) #28	RAB33A (ENSCJPG00005003849)	SLC25A14 (ENSCJPG00005003744) #26	GPR119 (ENSCJPG00005003743) #27	ENOX2 (ENSCJPG00005003594) #29	CHMP1B (ENSCJPG00005003590)	TBX22 (ENSCJPG00005003586)	ITM2A (ENSCJPG00005003583)	ENSCJPG00005003581	ENSCJPG00005003580	ENSCJPG00005003579	LPAR4 (ENSCJPG00005003578)	ENSCJPG00005003577
Anatidae	ANCESTRAL SPECIES	78	ENSGT00940000161397	ENSGT00940000162502	ENSGT00940000156656	ENSGT00940000159460	ENSGT00950000182963.b.b	ENSGT00510000047029	ENSGT00940000156837	ENSGT00940000157996.a #16	ENSGT00390000014020	ENSGT00940000157196.a.a #18	ENSGT00940000157996.b #16	ENSGT00940000157196.a.b #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000153737.a.e #22	ENSGT01070000253816.a.a.a	ENSGT00940000153763.a	ENSGT00940000153904.b #30	ENSGT00390000006788.a.a #29	ENSGT00940000159471 #26	ENSGT00890000139472 #28	ENSGT00940000160863	ENSGT00940000156455 #24
Pink-footed goose	MODERN SPECIES	307	ENSABRG00000002635	ENSABRG00000002623	CLIC2 (ENSABRG00000002601)	FAAH2 (ENSABRG00000002563)	ENSABRG00000002550	MID2 (ENSABRG00000002534)	NHSL2 (ENSABRG00000002513)	PIN4 (ENSABRG00000002501)	ERCC6L (ENSABRG00000002487)	OCRL (ENSABRG00000002449) #16	APLN (ENSABRG00000002437)	XPNPEP2 (ENSABRG00000002152) #18	SASH3 (ENSABRG00000002110) #19	ZDHHC9 (ENSABRG00000002086) #20	ENSABRG00000002062 #21	BCORL1 (ENSABRG00000002012) #22	ENSABRG00000001986	ENSABRG00000001972	CLCN5 (ENSABRG00000001926)	ENSABRG00000001898 #30	ENOX2 (ENSABRG00000001871) #29	GPR119 (ENSABRG00000001856) #27	SLC25A14 (ENSABRG00000001424) #26	RBMX2 (ENSABRG00000001395) #28	RAB33A (ENSABRG00000001381)
Galloanserae	ANCESTRAL SPECIES																	ENSGT00940000153737.a.f #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT00940000153737.a.f #22
Japanese quail	MODERN SPECIES	642																ENSCJPG00005002891 #22
Anura	ANCESTRAL SPECIES	19	ENSGT00940000158229	ENSGT00530000063872.A	ENSGT00390000017860.a.a	ENSGT00510000047733	ENSGT00550000075160	ENSGT01100000263512.a.a.a.a	ENSGT00940000165106	ENSGT00950000183055.a.b	ENSGT00530000063582.a	ENSGT01060000248589.C	ENSGT01100000263519.A.b.b.b.a.a	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00500000044890.b	ENSGT00940000153737.a #22	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157996 #16	ENSGT00390000014020	ENSGT00940000157196 #18	ENSGT00940000160111 #19	ENSGT00940000159999 #20	ENSGT00390000008142 #21	ENSGT00940000158335	ENSGT00940000159818	ENSGT00390000001134.b	ENSGT00950000182994.A	ENSGT00390000000141	ENSGT00940000159611
Frog	MODERN SPECIES	8	mtmr1 (ENSXETG00000007741)	cd99l2 (ENSXETG00000011390)	mtm1 (ENSXETG00000017786)	mamld1 (ENSXETG00000007743)	tmem185a (ENSXETG00000007744)	ids (ENSXETG00000007745)	aff2 (ENSXETG00000019630)	soho1 (ENSXETG00000019647)	ENSXETG00000042834	mynn (ENSXETG00000004288)	slitrk4 (ENSXETG00000012352)	ENSXETG00000048839	sox3 (ENSXETG00000046055)	tspan6 (ENSXETG00000007608)	thrsp (ENSXETG00000044715)	bcorl1 (ENSXETG00000007610) #22	ENSXETG00000049227	diaph2 (ENSXETG00000018132)	ENSXETG00000043428	ENSXETG00000038100	pcdh19 (ENSXETG00000031488)	ENSXETG00000042401	ENSXETG00000049167	tnmd (ENSXETG00000033578)	ocrl (ENSXETG00000038121) #16	apln (ENSXETG00000048353)	vsig1 (ENSXETG00000012851)	psmd10 (ENSXETG00000012853)	atg4a (ENSXETG00000012854)	amot (ENSXETG00000012859)	lhfpl1 (ENSXETG00000038373)
Leishan spiny toad	MODERN SPECIES	12	ENSLLEG00000021277	ENSLLEG00000021239	SPRY3 (ENSLLEG00000021216)	TMLHE (ENSLLEG00000021130)	ENSLLEG00000021097	ENSLLEG00000021067	ENSLLEG00000020895	ENSLLEG00000020824	ENSLLEG00000020607	ENSLLEG00000020338	ENSLLEG00000020223	SYTL4 (ENSLLEG00000019740)	SRPX2 (ENSLLEG00000019472)	ENSLLEG00000019389	TSPAN6 (ENSLLEG00000019251)	BCORL1 (ENSLLEG00000018943) #22	ENSLLEG00000018897	ENSLLEG00000018862	ENSLLEG00000018817	ENSLLEG00000018800	ENSLLEG00000018090	ENSLLEG00000018036	PCDH19 (ENSLLEG00000017872)	TNMD (ENSLLEG00000017771)	OCRL (ENSLLEG00000016751) #16	APLN (ENSLLEG00000016682)	ENSLLEG00000016661	ENSLLEG00000016644	XPNPEP2 (ENSLLEG00000016456) #18	SASH3 (ENSLLEG00000016358) #19	ZDHHC9 (ENSLLEG00000016126) #20
Coelacanth	MODERN SPECIES	335						AIFM1 (ENSLACG00000001197) #24	elf1 (ENSLACG00000007084)	MARS2 (ENSLACG00000007705)	RAB33A (ENSLACG00000007934)	ENSLACG00000008328	OCRL (ENSLACG00000009649) #16	XPNPEP2 (ENSLACG00000013078) #18	SASH3 (ENSLACG00000013698) #19	ZDHHC9 (ENSLACG00000014071) #20	si:dkey-251i10.3 (ENSLACG00000014376) #21	BCORL1 (ENSLACG00000014826) #22	mid1ip1l (ENSLACG00000015105)	TSPAN6 (ENSLACG00000015351)	SRPX2 (ENSLACG00000015590)	SYTL4 (ENSLACG00000015677)	TRMT12 (ENSLACG00000015869)	CSTF2 (ENSLACG00000015927)	NOX1 (ENSLACG00000016082)	xkrx (ENSLACG00000016225)	ENSLACG00000016326	TRMT2B (ENSLACG00000016408)	ENSLACG00000016480	TMEM35A (ENSLACG00000016568)	CENPI (ENSLACG00000016604)	DRP2 (ENSLACG00000016961)	ENSLACG00000017056
Actinopterygii	ANCESTRAL SPECIES	37	ENSGT00390000008751.b	ENSGT00390000018085	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00940000155145	ENSGT00550000074964	ENSGT00940000155339
Neopterygii	ANCESTRAL SPECIES	12	ENSGT00390000008751.b	ENSGT00390000018085	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Osteoglossocephalai	ANCESTRAL SPECIES	19	ENSGT00390000008751.b	ENSGT00390000018085	ENSGT00940000158469	ENSGT00940000164465	ENSGT00940000154661	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00390000008142 #21	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Clupeocephala	ANCESTRAL SPECIES	35							ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Otomorpha	ANCESTRAL SPECIES	49							ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT01030000234532.A.a.a.a.a.b
Clupeiformes	ANCESTRAL SPECIES	78	ENSGT00390000002137	ENSGT00390000000002.a.a.a.nb.a	ENSGT00940000157352.b	ENSGT00940000156077.g.a	ENSGT00670000098059.c.a	ENSGT00940000157489	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000004939	APBB2 (ENSCHAG00000004987)	NSUN7 (ENSCHAG00000005007)	CHRNA9 (ENSCHAG00000005043)	ube2ka (ENSCHAG00000005128)	KLB (ENSCHAG00000005173)	taf7 (ENSCHAG00000005185)	ENSCHAG00000005271	drp2 (ENSCHAG00000005398)	CENPI (ENSCHAG00000009201)	tmem35 (ENSCHAG00000009488)	arl13a (ENSCHAG00000009502)	xkrx (ENSCHAG00000009518)	nox1 (ENSCHAG00000009537)	cstf2 (ENSCHAG00000010095)	ENSCHAG00000010154 #22	mid1ip1l (ENSCHAG00000010165)	tspan7 (ENSCHAG00000010169)	SRPX2 (ENSCHAG00000010196)	sytl4 (ENSCHAG00000010339)	trmt12 (ENSCHAG00000010468)	zdhhc9 (ENSCHAG00000010497) #20	SASH3 (ENSCHAG00000010518) #19	xpnpep2 (ENSCHAG00000010557) #18	apln (ENSCHAG00000011532)	ocrl (ENSCHAG00000011561) #16	ENSCHAG00000013152	clic2 (ENSCHAG00000013174)	ENSCHAG00000013353	rom1b (ENSCHAG00000013371)	ccdc88b (ENSCHAG00000013532)
Denticle herring	MODERN SPECIES	9	ENSDCDG00000030743	APBB2 (ENSDCDG00000030747)	NSUN7 (ENSDCDG00000030751)	CHRNA9 (ENSDCDG00000030760)	ube2ka (ENSDCDG00000030802)	KLB (ENSDCDG00000030807)	taf7 (ENSDCDG00000030835)	ENSDCDG00000030906	drp2 (ENSDCDG00000030963)	CENPI (ENSDCDG00000031993)	tmem35 (ENSDCDG00000032008)	arl13a (ENSDCDG00000032011)	xkrx (ENSDCDG00000032014)	nox1 (ENSDCDG00000032031)	cstf2 (ENSDCDG00000032333)	ENSDCDG00000032336 #22	mid1ip1l (ENSDCDG00000032337)	tspan7 (ENSDCDG00000022617)	SRPX2 (ENSDCDG00000022619)	sytl4 (ENSDCDG00000022627)	trmt12 (ENSDCDG00000022628)	zdhhc9 (ENSDCDG00000022631) #20	SASH3 (ENSDCDG00000022632) #19	xpnpep2 (ENSDCDG00000022635) #18	ENSDCDG00000022653	ENSDCDG00000022654	ocrl (ENSDCDG00000022729) #16	ENSDCDG00000025872	clic2 (ENSDCDG00000025877)	urp1 (ENSDCDG00000025883)	ENSDCDG00000025884
Otophysi	ANCESTRAL SPECIES	75	ENSGT00390000008751.b	ENSGT00940000158789	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157039.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000166023	ENSGT00940000161486	ENSGT00390000012944	ENSGT00940000155650.a.a	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00940000157281	ENSGT00940000166658.a	ENSGT00390000012182	ENSGT00940000153669.b.p	ENSGT00940000159922.a.a
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00940000158469	ENSGT00940000158789	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157039.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000166023	ENSGT00940000161486	ENSGT00390000012944	ENSGT00940000155650.a.a	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00390000012630.A.b	ENSGT00390000007501	ENSGT00940000156641.k.b	ENSGT00940000159538.g.a	ENSGT00530000063812.B	ENSGT00950000182850.a.b.a.b.b.n
Channel catfish	MODERN SPECIES	27	fbxo38 (ENSIPUG00000017238)	DIAPH2 (ENSIPUG00000017295)	pcdh19 (ENSIPUG00000017368)	dync2li1 (ENSIPUG00000017402)	tnmd (ENSIPUG00000017409)	elf4 (ENSIPUG00000017417)	taf7 (ENSIPUG00000017450)	ENSIPUG00000017569	drp2 (ENSIPUG00000017593)	CENPI (ENSIPUG00000017661)	tmem35a (ENSIPUG00000017714)	arl13a (ENSIPUG00000017720)	Xk (ENSIPUG00000017780)	nox1 (ENSIPUG00000017799)	cstf2 (ENSIPUG00000017839)	ENSIPUG00000017870 #22	tspan7 (ENSIPUG00000017920)	srpx2 (ENSIPUG00000017961)	SYTL4 (ENSIPUG00000017973)	trmt12 (ENSIPUG00000018011)	rnaseh2c (ENSIPUG00000018044)	ZBTB3 (ENSIPUG00000018082)	lsm11 (ENSIPUG00000018086)	CLINT1 (ENSIPUG00000018092)	ebf1 (ENSIPUG00000018125)	ENSIPUG00000018187	SH3TC2 (ENSIPUG00000018204)	ablim3 (ENSIPUG00000018280)	afap1l1 (ENSIPUG00000018335)	ENSIPUG00000018444	foxi1e (ENSIPUG00000018458)
Characiphysae_b	ANCESTRAL SPECIES	146	ENSGT00940000158469	ENSGT00940000158789	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157039.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000166023	ENSGT00940000161486	ENSGT00390000012944	ENSGT00940000155650.a.a	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00940000157281	ENSGT00940000166658.a	ENSGT00390000012182
Characoidei	ANCESTRAL SPECIES	2	ENSGT00940000158469	ENSGT00940000158789	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157039.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000166023	ENSGT00940000161486	ENSGT00390000012944	ENSGT00940000155650.a.a	ENSGT00950000182859.A.a.b.b.d.b	ENSGT00940000157281	ENSGT00940000166658.a	ENSGT00390000012630.A.b	ENSGT00940000156641.k.b	ENSGT00940000159538.g.a	ENSGT00530000063812.B
Red-bellied piranha	MODERN SPECIES	56	BTK (ENSPNAG00000018069)	glra4a (ENSPNAG00000018108)	DIAPH2 (ENSPNAG00000018321)	pcdh19 (ENSPNAG00000018396)	tnmd (ENSPNAG00000018428)	elf1 (ENSPNAG00000018485)	taf7 (ENSPNAG00000018550)	ENSPNAG00000018582	drp2 (ENSPNAG00000006595)	CENPI (ENSPNAG00000018731)	tmem35 (ENSPNAG00000018748)	arl13a (ENSPNAG00000018795)	xkrx (ENSPNAG00000018809)	nox1 (ENSPNAG00000018857)	cstf2 (ENSPNAG00000018887)	ENSPNAG00000018925 #22	tspan7 (ENSPNAG00000018991)	SRPX2 (ENSPNAG00000019001)	sytl4 (ENSPNAG00000005144)	trmt12 (ENSPNAG00000019028)	rnaseh2c (ENSPNAG00000019111)	ZBTB3 (ENSPNAG00000019119)	LSM11 (ENSPNAG00000019128)	clint1a (ENSPNAG00000019182)	ebf3a (ENSPNAG00000019350)	RNF145 (ENSPNAG00000019400)	il12ba (ENSPNAG00000005879)	UBTD2 (ENSPNAG00000019833)	adrb2a (ENSPNAG00000019838)	SH3TC2 (ENSPNAG00000006468)	ablim3 (ENSPNAG00000019976)
Mexicana tetra	MODERN SPECIES	16	pcdh19 (ENSAMXG00000021519)	ENSAMXG00000029247	ENSAMXG00000033641	ENSAMXG00000040631	tnmd (ENSAMXG00000034178)	elf1 (ENSAMXG00000039364)	drp2 (ENSAMXG00000021507)	taf7 (ENSAMXG00000021515)	ENSAMXG00000036456	CENPI (ENSAMXG00000021502)	tmem35 (ENSAMXG00000030227)	arl13a (ENSAMXG00000021495)	xkrx (ENSAMXG00000031510)	nox1 (ENSAMXG00000021484)	cstf2 (ENSAMXG00000021477)	ENSAMXG00000039235 #22	tspan7 (ENSAMXG00000043884)	SRPX2 (ENSAMXG00000040946)	sytl4 (ENSAMXG00000001212)	trmt12 (ENSAMXG00000040366)	rnaseh2c (ENSAMXG00000001210)	ENSAMXG00000044033	LSM11 (ENSAMXG00000033820)	clint1a (ENSAMXG00000001202)	ebf3a (ENSAMXG00000001200)	RNF145 (ENSAMXG00000038735)	ENSAMXG00000040860	il12ba (ENSAMXG00000001197)	ENSAMXG00000034568	adrb2a (ENSAMXG00000026034)	ENSAMXG00000026033
Electric eel	MODERN SPECIES	425									drp2 (ENSEEEG00000016586)	CENPI (ENSEEEG00000016902)	tmem35 (ENSEEEG00000016904)	arl13a (ENSEEEG00000016905)	xkrx (ENSEEEG00000016906)	nox1 (ENSEEEG00000016911)	cstf2 (ENSEEEG00000016914)	ENSEEEG00000016923 #22	tspan7 (ENSEEEG00000016929)	SRPX2 (ENSEEEG00000016931)	sytl4 (ENSEEEG00000016932)	trmt12 (ENSEEEG00000016933)	rnaseh2c (ENSEEEG00000016934)	ZBTB3 (ENSEEEG00000016935)	LSM11 (ENSEEEG00000016936)	clint1a (ENSEEEG00000016938)	ebf3a (ENSEEEG00000016949)	RNF145 (ENSEEEG00000016952)
Cyprinoidei	ANCESTRAL SPECIES	31	ENSGT00390000008751.b	ENSGT00940000158789	ENSGT00940000157822	ENSGT00940000159162	ENSGT00480000042679.a	ENSGT00940000157039.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000158417.a	ENSGT00940000156892.a	ENSGT00940000155353.b	ENSGT01030000234530.a.f.a.b.a	ENSGT01030000234530.a.f.a.a	ENSGT00940000156736.d	ENSGT00940000166427	ENSGT00940000156295.h	ENSGT00940000158277.a	ENSGT01030000234904	ENSGT00940000156944.a.b	ENSGT00940000154194.c.a	ENSGT00940000164379.e.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	914																ENSGT00940000153737.a.i #22	ENSGT00500000044890.b.b	ENSGT00940000159092.n	ENSGT00940000158417.a.e	ENSGT00940000156892.a.h	ENSGT00940000155353.b.a.b
Cyprininae_a	ANCESTRAL SPECIES	134	ENSGT00390000008751.b.a.a	ENSGT00940000158789.e	ENSGT00940000157822.fb	ENSGT00940000159162.b	ENSGT00480000042679.a.b	ENSGT00940000157039.a.b	ENSGT00940000160861.p	ENSGT00390000001289.b.a.c	ENSGT00940000153467.a.b.i	ENSGT00390000013235.e	ENSGT00940000154325.a	ENSGT00940000161284.h	ENSGT00390000003231.a.j	ENSGT00940000165729.b	ENSGT00940000158987.j	ENSGT00940000153737.a.i #22	ENSGT00500000044890.b.b	ENSGT00940000159092.n	ENSGT00940000158417.a.e	ENSGT00940000156892.a.h	ENSGT00940000155353.b.b	ENSGT01030000234530.a.f.a.b.a	ENSGT01030000234530.a.f.a.a.l	ENSGT00940000156736.d.d	ENSGT00940000166427.c	ENSGT00940000156295.h.b	ENSGT00940000158277.a.d	ENSGT00940000156944.a.b.c	ENSGT00940000154194.c.a.i	ENSGT00940000164379.e.a.c	ENSGT00730000111223.o
Common carp reference	MODERN SPECIES	35	ENSCCRG00000025705	glra4a (ENSCCRG00000022464)	DIAPH2 (ENSCCRG00000057178)	pcdh19 (ENSCCRG00000047100)	tnmd (ENSCCRG00000001855)	taf7 (ENSCCRG00000048654)	elf1 (ENSCCRG00000076887)	ENSCCRG00000001916	drp2 (ENSCCRG00000078233)	CENPI (ENSCCRG00000001964)	tmem35 (ENSCCRG00000077271)	arl13a (ENSCCRG00000043199)	xkrx (ENSCCRG00000043208)	nox1 (ENSCCRG00000048201)	cstf2 (ENSCCRG00000048547)	ENSCCRG00000048570 #22	mid1ip1l (ENSCCRG00000064546)	tspan7 (ENSCCRG00000082814)	ENSCCRG00000070027	chrnb3b (ENSCCRG00000075212)	ENSCCRG00000053279	ENSCCRG00000048630	nitr13 (ENSCCRG00000058341)	ENSCCRG00000072985	ENSCCRG00000048852	ENSCCRG00000054707	pcdh18b (ENSCCRG00000057920)	ENSCCRG00000075886	pcdh10b (ENSCCRG00000066502)	ENSCCRG00000067193	adra1bb (ENSCCRG00000050301)
Golden-line barbel	MODERN SPECIES	166	BTK (ENSSGRG00000052806)	gla (ENSSGRG00000052864)	glra4a (ENSSGRG00000052869)	DIAPH2 (ENSSGRG00000052887)	pcdh19 (ENSSGRG00000052888)	tnmd (ENSSGRG00000052893)	elf1 (ENSSGRG00000052894)	taf7 (ENSSGRG00000052896)	ENSSGRG00000052897	CENPI (ENSSGRG00000052916)	tmem35 (ENSSGRG00000052922)	arl13a (ENSSGRG00000052924)	xkrx (ENSSGRG00000052926)	nox1 (ENSSGRG00000052928)	cstf2 (ENSSGRG00000052929)	ENSSGRG00000052935 #22	mid1ip1l (ENSSGRG00000052936)	tspan7 (ENSSGRG00000052940)	ENSSGRG00000052944	chrnb3b (ENSSGRG00000052947)	ENSSGRG00000052951	ENSSGRG00000052952	nitr13 (ENSSGRG00000052953)	fgfrl1b (ENSSGRG00000052954)	ENSSGRG00000052956	pcdh18b (ENSSGRG00000053000)
Goldfish	MODERN SPECIES	5	gla (ENSCARG00000041102)	glra4a (ENSCARG00000040777)	DIAPH2 (ENSCARG00000040170)	pcdh19 (ENSCARG00000040064)	tnmd (ENSCARG00000040001)	elf1 (ENSCARG00000039958)	taf7 (ENSCARG00000039871)	ENSCARG00000039839	drp2 (ENSCARG00000037929)	CENPI (ENSCARG00000037290)	tmem35 (ENSCARG00000037211)	arl13a (ENSCARG00000037146)	xkrx (ENSCARG00000037084)	nox1 (ENSCARG00000035764)	cstf2 (ENSCARG00000035547)	ENSCARG00000035512 #22	mid1ip1l (ENSCARG00000035500)	tspan7 (ENSCARG00000035485)	ENSCARG00000035472	chrnb3b (ENSCARG00000035457)	ENSCARG00000035447	nitr13 (ENSCARG00000035431)	fgfrl1b (ENSCARG00000035424)	ENSCARG00000035327	ENSCARG00000035308	LINGO2 (ENSCARG00000035295)	tomm5 (ENSCARG00000035288)	grhpra (ENSCARG00000035236)	ENSCARG00000035228	slc30a9 (ENSCARG00000033726)	GRXCR1 (ENSCARG00000033589)
Cyprininae	ANCESTRAL SPECIES	265	ENSGT00940000160861.o	ENSGT00390000001289.b.a.d	ENSGT00940000153467.a.b.j	ENSGT00390000013235.f	ENSGT00940000153467.a.b.i	ENSGT00390000013235.e	ENSGT00940000154325.a	ENSGT00940000161284.h	ENSGT00390000003231.a.j	ENSGT00940000165729.b	ENSGT00940000158987.j	ENSGT00940000161284.g	ENSGT00390000003231.a.i	ENSGT00940000165729.a	ENSGT00940000158987.i	ENSGT00940000153737.a.j #22	ENSGT00500000044890.b.a	ENSGT00940000159092.m	ENSGT00940000158417.a.f	ENSGT00940000156892.a.g	ENSGT00940000155353.b.a.a	ENSGT01030000234530.a.f.a.a.k	ENSGT00940000155353.b.b	ENSGT01030000234530.a.f.a.b.a	ENSGT01030000234530.a.f.a.a.l	ENSGT00940000156736.d	ENSGT00940000166427.c	ENSGT00940000156295.h.b	ENSGT00940000166427.d	ENSGT00940000156295.h.a	ENSGT00940000158277.a.c
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2347			pcdh19 (ENSCARG00000041616)	tnmd (ENSCARG00000041807)	elf1 (ENSCARG00000041874)	taf7 (ENSCARG00000041941)	ENSCARG00000042363	drp2 (ENSCARG00000042530)	ENSCARG00000045193	CENPI (ENSCARG00000045215)	tmem35 (ENSCARG00000045412)	arl13a (ENSCARG00000045433)	xkrx (ENSCARG00000045461)	nox1 (ENSCARG00000035441)	cstf2 (ENSCARG00000035787)	ENSCARG00000035863 #22	ENSCARG00000035875 #22	mid1ip1l (ENSCARG00000035880)	tspan7 (ENSCARG00000035892)	ENSCARG00000035921	chrnb3b (ENSCARG00000035937)	ITGA6 (ENSCARG00000035981)	nitr13 (ENSCARG00000036000)	ENSCARG00000036010	ENSCARG00000036024	ENSCARG00000036048	ENSCARG00000036166	pcdh18b (ENSCARG00000038614)
Goldfish	MODERN SPECIES	2347		pcdh19 (ENSCARG00000041616)	tnmd (ENSCARG00000041807)	elf1 (ENSCARG00000041874)	taf7 (ENSCARG00000041941)	ENSCARG00000042363	drp2 (ENSCARG00000042530)	ENSCARG00000045193	CENPI (ENSCARG00000045215)	tmem35 (ENSCARG00000045412)	arl13a (ENSCARG00000045433)	xkrx (ENSCARG00000045461)	nox1 (ENSCARG00000035441)	cstf2 (ENSCARG00000035787)	ENSCARG00000035863 #22	ENSCARG00000035875 #22	mid1ip1l (ENSCARG00000035880)	tspan7 (ENSCARG00000035892)	ENSCARG00000035921	chrnb3b (ENSCARG00000035937)	ITGA6 (ENSCARG00000035981)	nitr13 (ENSCARG00000036000)	ENSCARG00000036010	ENSCARG00000036024	ENSCARG00000036048	ENSCARG00000036166	pcdh18b (ENSCARG00000038614)
Cyprininae_a	ANCESTRAL SPECIES	286	ENSGT00940000158469.l	ENSGT00390000008751.b.a.b	ENSGT00940000158789.f	ENSGT00940000157822.eb	ENSGT00940000159162.a	ENSGT00480000042679.a.a	ENSGT00940000157039.a.a	ENSGT00940000160861.o	ENSGT00390000001289.b.a.d	ENSGT00940000153467.a.b.j	ENSGT00390000013235.f	ENSGT00940000161284.g	ENSGT00390000003231.a.i	ENSGT00940000165729.a	ENSGT00940000158987.i	ENSGT00940000153737.a.j #22	ENSGT00500000044890.b.a	ENSGT00940000159092.m	ENSGT00940000158417.a.f	ENSGT00940000156892.a.g	ENSGT00940000155353.b.a.a	ENSGT01030000234530.a.f.a.a.k	ENSGT00940000156736.d.c	ENSGT00940000166427.d	ENSGT00940000156295.h.a	ENSGT00940000158277.a.c
Common carp reference	MODERN SPECIES	20	zgc:101583 (ENSCCRG00000049297)	ENSCCRG00000049315	gla (ENSCCRG00000080520)	glra4a (ENSCCRG00000026072)	DIAPH2 (ENSCCRG00000074557)	pcdh19 (ENSCCRG00000019918)	tnmd (ENSCCRG00000073229)	elf1 (ENSCCRG00000043041)	taf7 (ENSCCRG00000001921)	drp2 (ENSCCRG00000062292)	ENSCCRG00000048168	arl13a (ENSCCRG00000048181)	xkrx (ENSCCRG00000056912)	nox1 (ENSCCRG00000043239)	cstf2 (ENSCCRG00000066582)	ENSCCRG00000076464 #22	mid1ip1l (ENSCCRG00000062801)	tspan7 (ENSCCRG00000069656)	ENSCCRG00000073639	ENSCCRG00000048610	chrnb3b (ENSCCRG00000048599)	ENSCCRG00000048613	nitr13 (ENSCCRG00000048614)	fgfrl1b (ENSCCRG00000048617)	ENSCCRG00000027023	pcdh18b (ENSCCRG00000016363)	pcdh10b (ENSCCRG00000007685)	eif4ea (ENSCCRG00000072212)	adra1bb (ENSCCRG00000043054)	adh5 (ENSCCRG00000042995)	gar1 (ENSCCRG00000081409)
Golden-line barbel	MODERN SPECIES	725					tnmd (ENSSGRG00000023894)	elf1 (ENSSGRG00000023899)	taf7 (ENSSGRG00000023903)	ENSSGRG00000023908	drp2 (ENSSGRG00000023918)	ENSSGRG00000023953	arl13a (ENSSGRG00000024166)	arl13a (ENSSGRG00000024170)	xkrx (ENSSGRG00000024173)	nox1 (ENSSGRG00000024198)	cstf2 (ENSSGRG00000024549)	ENSSGRG00000024574 #22	mid1ip1l (ENSSGRG00000024575)	tspan7 (ENSSGRG00000024576)	ENSSGRG00000024590	chrnb3b (ENSSGRG00000024591)	ENSSGRG00000024597	fgfrl1b (ENSSGRG00000024601)
Zebrafish	MODERN SPECIES	5	glra4a (ENSDARG00000006865)	DIAPH2 (ENSDARG00000076060)	ENSDARG00000112403	pcdh19 (ENSDARG00000034344)	tnmd (ENSDARG00000052615)	elf1 (ENSDARG00000020759)	taf7 (ENSDARG00000019572)	ENSDARG00000098164	drp2 (ENSDARG00000101419)	CENPI (ENSDARG00000052565)	tmem35 (ENSDARG00000052567)	arl13a (ENSDARG00000052575)	xkrx (ENSDARG00000044011)	nox1 (ENSDARG00000087574)	cstf2 (ENSDARG00000090788)	ENSDARG00000077912 #22	mid1ip1l (ENSDARG00000018145)	tspan7 (ENSDARG00000015759)	ENSDARG00000021392	chrnb3b (ENSDARG00000038508)	ENSDARG00000056018	nitr13 (ENSDARG00000036125)	fgfrl1b (ENSDARG00000052556)	ENSDARG00000071384	pcdh18b (ENSDARG00000052494)	ENSDARG00000114583	pcdh10b (ENSDARG00000102824)	adra1bb (ENSDARG00000041173)	eif4ea (ENSDARG00000077012)	adh5 (ENSDARG00000080010)	gar1 (ENSDARG00000076526)
Euteleosteomorpha	ANCESTRAL SPECIES	9	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Protacanthopterygii	ANCESTRAL SPECIES	28	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00390000016110	ENSGT00940000154394.b.a.a.a.a.b.a	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.e.b	ENSGT01030000235878	ENSGT00940000153662.A.g	ENSGT00950000182881.a.b.a.b.z.b	ENSGT00390000006394	ENSGT00940000160322
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	406									ENSGT00940000153467.a.b.e.b.a.a	ENSGT00390000013235.j	ENSGT00940000154325.a.e	ENSGT00940000161284.e	ENSGT00390000003231.a.o.b	ENSGT00940000165729.d	ENSGT00940000158987.k	ENSGT00940000153737.a.k #22	ENSGT00500000044890.b	ENSGT00940000159092.o	ENSGT00940000159149.h	ENSGT00940000159060.j	ENSGT00390000016110.j	ENSGT00940000154394.b.a.a.a.a.b.a	ENSGT00940000159492.f	ENSGT00940000158625.e	ENSGT00940000153169.A.b.b.e.b.a.a	ENSGT00940000153662.A.g.b	ENSGT00950000182881.a.b.a.b.z.b.d	ENSGT00390000006394.c	ENSGT00940000160322.d	ENSGT00940000158578.e.b	ENSGT00940000163364.a
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1425															ENSHHUG00000050999 #22	ENSHHUG00000050996 #22	tspan7 (ENSHHUG00000050977)	SRPX2 (ENSHHUG00000050974)	sytl4 (ENSHHUG00000050968)	aup1 (ENSHHUG00000050965)	ENSHHUG00000050964	DGKQ (ENSHHUG00000050940)	ENSHHUG00000050894	ENSHHUG00000050299	prpf19 (ENSHHUG00000050247)	tcirg1b (ENSHHUG00000050222)	mrpl18 (ENSHHUG00000050213)	SSH3 (ENSHHUG00000050194)	grhpra (ENSHHUG00000050162)	tomm5 (ENSHHUG00000050148)	ENSHHUG00000050146
Huchen	MODERN SPECIES	1425																ENSHHUG00000050999 #22	ENSHHUG00000050996 #22	tspan7 (ENSHHUG00000050977)	SRPX2 (ENSHHUG00000050974)	sytl4 (ENSHHUG00000050968)	aup1 (ENSHHUG00000050965)	ENSHHUG00000050964	DGKQ (ENSHHUG00000050940)	ENSHHUG00000050894	ENSHHUG00000050299	prpf19 (ENSHHUG00000050247)	tcirg1b (ENSHHUG00000050222)	mrpl18 (ENSHHUG00000050213)	SSH3 (ENSHHUG00000050194)	grhpra (ENSHHUG00000050162)	tomm5 (ENSHHUG00000050148)
Salmoninae_a	ANCESTRAL SPECIES	18	ENSGT00940000156341.e.b.b	ENSGT00950000182941.b.a.k	ENSGT00940000154833.b.d	ENSGT00940000153460.c.b.c.a.c	ENSGT00940000160861.n	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b.e.b.a.a	ENSGT00940000153467.a.b.e.b.b	ENSGT00390000013235.j	ENSGT00670000098059.c.a.a.b.b.a	ENSGT00940000154325.a.e	ENSGT00940000161284.e	ENSGT00390000003231.a.o.b	ENSGT00940000165729.d	ENSGT00940000158987.k	ENSGT00940000153737.a.k #22	ENSGT00500000044890.b.c	ENSGT00940000159092.o	ENSGT00940000159149.h	ENSGT00940000159060.j	ENSGT00390000016110.j	ENSGT00940000154394.b.a.a.a.a.b.a	ENSGT00940000159492.f	ENSGT00940000158625.e	ENSGT00940000153169.A.b.b.e.b.a.a	ENSGT00940000153662.A.g.b	ENSGT00950000182881.a.b.a.b.z.b.d	ENSGT00390000006394.c	ENSGT00940000160322.d	ENSGT00940000158578.e.b	ENSGT00940000163364.a
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00390000011545.a	ENSGT00940000156341.e.b.b	ENSGT00950000182941.b.a.k	ENSGT00940000154833.b.d	ENSGT00940000153460.c.b.c.a.c	ENSGT00940000160861.n	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b.e.b.a.a	ENSGT00390000013235.j	ENSGT00670000098059.c.a.a.b.b.a	ENSGT00940000154325.a.e	ENSGT00940000161284.e	ENSGT00390000003231.a.o.b	ENSGT00940000165729.d	ENSGT00940000158987.k	ENSGT00940000153737.a.k #22	ENSGT00500000044890.b.c	ENSGT00940000159092.o	ENSGT00940000159149.h	ENSGT00940000159060.j	ENSGT00390000016110.j	ENSGT00940000154394.b.a.a.a.a.b.a	ENSGT00940000159492.f	ENSGT00940000158625.e	ENSGT00940000153169.A.b.b.e.b.a.a	ENSGT00940000153662.A.g.b	ENSGT00950000182881.a.b.a.b.z.b.d	ENSGT00390000006394.c	ENSGT00940000160322.d	ENSGT00940000158578.e.b	ENSGT00940000163364.a
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00510000051633.d	ENSGT01100000263502.A.a.a.a.a.a.e	ENSGT00390000011545.a	ENSGT00940000156341.e.b.b	ENSGT00950000182941.b.a.k	ENSGT00940000154833.b.d	ENSGT00940000153460.c.b.c.a.c	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b.e.b.a.a	ENSGT00390000013235.j	ENSGT00670000098059.c.a.a.b.b.a	ENSGT00940000161284.e	ENSGT00390000003231.a.o.b	ENSGT00940000165729.d	ENSGT00940000158987.k	ENSGT00940000153737.a.k #22	ENSGT00500000044890.b.c	ENSGT00940000159092.o	ENSGT00940000159149.h	ENSGT00940000159060.j	ENSGT00390000016110.j	ENSGT00940000154394.b.a.a.a.a.b.a	ENSGT00940000159492.f	ENSGT00940000158625.e	ENSGT00940000153169.A.b.b.e.b.a.a	ENSGT00940000153662.A.g.b	ENSGT00950000182881.a.b.a.b.z.b.d	ENSGT00390000006394.c	ENSGT00940000160322.d	ENSGT00940000158578.e.b	ENSGT00940000163364.a
Chinook salmon	MODERN SPECIES	17	VSTM4 (ENSOTSG00005012875)	LRRC18 (ENSOTSG00005012876)	ARHGAP22 (ENSOTSG00005012877)	mapk8b (ENSOTSG00005012892)	ENSOTSG00005017626	gdf10b (ENSOTSG00005017628)	gdf2 (ENSOTSG00005017629)	rbp3 (ENSOTSG00005017630)	ENSOTSG00005017631	ENSOTSG00005017632	UBE2K (ENSOTSG00005017633)	arl13a (ENSOTSG00005017634)	xkrx (ENSOTSG00005017635)	nox1 (ENSOTSG00005017641)	cstf2 (ENSOTSG00005019670)	ENSOTSG00005019698 #22	mid1ip1l (ENSOTSG00005019703)	tspan7 (ENSOTSG00005019705)	ENSOTSG00005019713	sytl4 (ENSOTSG00005019753)	aup1 (ENSOTSG00005019755)	ENSOTSG00005019758	DGKQ (ENSOTSG00005019759)	ENSOTSG00005019760	ubtd1b (ENSOTSG00005019762)	mms19 (ENSOTSG00005019771)	zdhhc16b (ENSOTSG00005019860)	vps35l (ENSOTSG00005019911)	get4 (ENSOTSG00005026071)	ENSOTSG00005026072	heatr1 (ENSOTSG00005026073)
Coho salmon	MODERN SPECIES	10	si:dkeyp-11e3.1 (ENSOKIG00005009490)	ENSOKIG00005009480	ENSOKIG00005009426	fhl1a (ENSOKIG00005009387)	slc9a6a (ENSOKIG00005006560)	ENSOKIG00005006433	ENSOKIG00005006424	drp2 (ENSOKIG00005006048)	ENSOKIG00005005946	ENSOKIG00005005935	ENSOKIG00005005915	arl13a (ENSOKIG00005005892)	xkrx (ENSOKIG00005029630)	nox1 (ENSOKIG00005029162)	cstf2 (ENSOKIG00005029103)	ENSOKIG00005029048 #22	mid1ip1l (ENSOKIG00005029019)	tspan7 (ENSOKIG00005028995)	SYTL4 (ENSOKIG00005028975)	aup1 (ENSOKIG00005028955)	ENSOKIG00005028898	DGKQ (ENSOKIG00005028660)	ENSOKIG00005026011	ENSOKIG00005025818	prpf19 (ENSOKIG00005025506)	TCIRG1 (ENSOKIG00005025160)	mrpl18 (ENSOKIG00005025125)	ENSOKIG00005025110	grhpra (ENSOKIG00005024786)	tomm5 (ENSOKIG00005024754)	ENSOKIG00005024736
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000049442	ENSOMYG00000012163	fhl1a (ENSOMYG00000012123)	slc9a6a (ENSOMYG00000011013)	taf7 (ENSOMYG00000010796)	ENSOMYG00000010781	ENSOMYG00000050228	drp2 (ENSOMYG00000009831)	CENPI (ENSOMYG00000009450)	ENSOMYG00000009322	tmem35 (ENSOMYG00000058877)	arl13a (ENSOMYG00000009286)	xkrx (ENSOMYG00000009259)	nox1 (ENSOMYG00000008690)	cstf2 (ENSOMYG00000008393)	ENSOMYG00000008314 #22	mid1ip1l (ENSOMYG00000008284)	tspan7 (ENSOMYG00000008250)	ENSOMYG00000070010	ENSOMYG00000074934	SYTL4 (ENSOMYG00000008194)	ENSOMYG00000007842	ENSOMYG00000007742	ENSOMYG00000077029	ENSOMYG00000007699	ENSOMYG00000006671	ENSOMYG00000005455	ENSOMYG00000005283	ENSOMYG00000005086	ENSOMYG00000005024	ENSOMYG00000004991
Salmo	ANCESTRAL SPECIES	24	ENSGT00390000011545.a	ENSGT00940000156341.e.b.b	ENSGT00950000182941.b.a.k	ENSGT00940000154833.b.d	ENSGT00940000153460.c.b.c.a.c	ENSGT00940000160861.n	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b.e.b.b	ENSGT00390000013235.j	ENSGT00670000098059.c.a.a.b.b.a	ENSGT00940000154325.a.e	ENSGT00940000161284.e	ENSGT00390000003231.a.o.b	ENSGT00940000165729.d	ENSGT00940000158987.k	ENSGT00940000153737.a.k #22	ENSGT00500000044890.b.c	ENSGT00940000159092.o	ENSGT00940000159149.h	ENSGT00940000159060.j	ENSGT00390000016110.j	ENSGT00940000154394.b.a.a.a.a.a.b	ENSGT00940000159492.f	ENSGT00940000158625.e	ENSGT00940000153169.A.b.b.e.b.a.a	ENSGT00940000153662.A.g.b	ENSGT00950000182881.a.b.a.b.z.b.d	ENSGT00390000006394.c	ENSGT00940000160322.d	ENSGT00940000158578.e.b	ENSGT00940000158578.f
Atlantic salmon	MODERN SPECIES	24	si:dkeyp-11e3.1 (ENSSSAG00000076880)	ENSSSAG00000063355	MAP7D3 (ENSSSAG00000076884)	fhl1 (ENSSSAG00000076903)	slc9a6a (ENSSSAG00000076931)	taf7 (ENSSSAG00000077829)	ENSSSAG00000100090	drp2 (ENSSSAG00000077898)	ENSSSAG00000078484	ENSSSAG00000078501	tmem35 (ENSSSAG00000095235)	arl13a (ENSSSAG00000078506)	xkrx (ENSSSAG00000106290)	nox1 (ENSSSAG00000078532)	cstf2 (ENSSSAG00000078969)	ENSSSAG00000085135 #22	M1IP1 (ENSSSAG00000078987)	tspan7 (ENSSSAG00000078989)	ENSSSAG00000078991	SYTL4 (ENSSSAG00000078994)	ENSSSAG00000106647	ENSSSAG00000068911	ENSSSAG00000079027	ENSSSAG00000116602	ube2d2 (ENSSSAG00000079061)	ENSSSAG00000079082	ENSSSAG00000079096	ENSSSAG00000104819	ENSSSAG00000079175	grhpr (ENSSSAG00000079183)	ENSSSAG00000079208
River trout	MODERN SPECIES	22	si:dkeyp-11e3.1 (ENSSTUG00000027481)	ENSSTUG00000027486	MAP7D3 (ENSSTUG00000027496)	fhl1a (ENSSTUG00000027530)	slc9a6a (ENSSTUG00000027564)	taf7 (ENSSTUG00000028984)	ENSSTUG00000029013	drp2 (ENSSTUG00000029231)	ENSSTUG00000030793	UBE2K (ENSSTUG00000030846)	tmem35 (ENSSTUG00000030853)	arl13a (ENSSTUG00000030856)	xkrx (ENSSTUG00000030867)	nox1 (ENSSTUG00000030881)	cstf2 (ENSSTUG00000031168)	ENSSTUG00000031192 #22	mid1ip1l (ENSSTUG00000031205)	tspan7 (ENSSTUG00000031211)	SRPX2 (ENSSTUG00000031218)	sytl4 (ENSSTUG00000031254)	aup1 (ENSSTUG00000031310)	ENSSTUG00000031342	DGKQ (ENSSTUG00000031361)	ENSSTUG00000031620	ENSSTUG00000032670	prpf19 (ENSSTUG00000032698)	tcirg1b (ENSSTUG00000032827)	mrpl18 (ENSSTUG00000032917)	ENSSTUG00000032924	grhpra (ENSSTUG00000032940)	tomm5 (ENSSTUG00000033132)
Salmoninae	ANCESTRAL SPECIES	40	ENSGT00940000156341.e.b.a	ENSGT01030000234935	ENSGT00950000182941.b.a.l	ENSGT00960000189021	ENSGT00940000154833.b.c	ENSGT00940000153460.c.b.c.a.d	ENSGT00940000160861	ENSGT00940000153467.a.b.e.a	ENSGT00390000013235.i	ENSGT00940000154325.a.f	ENSGT00390000003231.a.p	ENSGT00940000161284.f	ENSGT00390000003231.a.o.a	ENSGT00940000165729.c	ENSGT00940000158987.l	ENSGT00940000153737.a.l #22	ENSGT00940000159092.p	ENSGT00940000159149.g	ENSGT00940000159060.i	ENSGT00940000153304.A	ENSGT00390000016110.i	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00940000154394.a.f	ENSGT00940000159492.e	ENSGT00940000158625.f	ENSGT00940000153169.A.b.b.e.b.a.b	ENSGT01030000235878	ENSGT00940000153662.A.g.a	ENSGT00950000182881.a.b.a.b.z.b.c	ENSGT00390000006394.d	ENSGT00940000160322.c
Salmoninae_a	ANCESTRAL SPECIES	40	ENSGT01100000263502.A.a.a.a.a.a.f	ENSGT00390000011545.b	ENSGT00940000156341.e.b.a	ENSGT01030000234935	ENSGT00950000182941.b.a.l	ENSGT00940000154833.b.c	ENSGT00940000153460.c.b.c.a.d	ENSGT00940000160861.m	ENSGT00940000153467.a.b.e.a	ENSGT00390000013235.i	ENSGT00940000154325.a.f	ENSGT00940000161284.f	ENSGT00390000003231.a.o.a	ENSGT00940000165729.c	ENSGT00940000158987.l	ENSGT00940000153737.a.l #22	ENSGT00500000044890.b.d	ENSGT00940000159092.p	ENSGT00940000159149.g	ENSGT00940000159060.i	ENSGT00940000153304.A	ENSGT00390000016110.i	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00940000154394.a.f	ENSGT00940000159492.e	ENSGT00940000158625.f	ENSGT00940000153169.A.b.b.e.b.a.b	ENSGT00940000153662.A.g.a	ENSGT00950000182881.a.b.a.b.z.b.c	ENSGT00390000006394.d	ENSGT00940000160322.c
Oncorhynchus	ANCESTRAL SPECIES	39	ENSGT00940000158723.h	ENSGT00510000051633.c	ENSGT00390000011545.b	ENSGT00940000156341.e.b.a	ENSGT00950000182941.b.a.l	ENSGT00940000154833.b.c	ENSGT00940000153460.c.b.c.a.d	ENSGT00940000160861.m	ENSGT00940000153467.a.b.e.a	ENSGT00390000013235.i	ENSGT00940000154325.a.f	ENSGT00940000161284.f	ENSGT00390000003231.a.o.a	ENSGT00940000165729.c	ENSGT00940000158987.l	ENSGT00940000153737.a.l #22	ENSGT00500000044890.b.d	ENSGT00940000159092.p	ENSGT00940000159149.g	ENSGT00940000159060.i	ENSGT00390000016110.i	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00940000159492.e	ENSGT00940000158625.f	ENSGT00940000153169.A.b.b.e.b.a.b	ENSGT01030000235408.b	ENSGT00940000153662.A.g.a	ENSGT00950000182881.a.b.a.b.z.b.c	ENSGT01000000220340	ENSGT00940000160322.c	ENSGT00940000158578.e.a
Oncorhynchus_a	ANCESTRAL SPECIES	40	ENSGT00940000165126.h	ENSGT00940000158723.h	ENSGT00510000051633.c	ENSGT00390000011545.b	ENSGT00940000156341.e.b.a	ENSGT00950000182941.b.a.l	ENSGT00940000154833.b.c	ENSGT00940000153460.c.b.c.a.d	ENSGT00940000160861.m	ENSGT00940000153467.a.b.e.a	ENSGT00390000013235.i	ENSGT00940000154325.a.f	ENSGT00390000003231.a.o.a	ENSGT00940000165729.c	ENSGT00940000158987.l	ENSGT00940000153737.a.l #22	ENSGT00500000044890.b.d	ENSGT00940000159092.p	ENSGT00940000159149.g	ENSGT00940000159060.i	ENSGT00390000016110.i	ENSGT00940000154394.b.a.a.a.b.b	ENSGT00940000159492.e	ENSGT00940000158625.f	ENSGT00940000153169.A.b.b.e.b.a.b	ENSGT01030000235408.b	ENSGT00940000153662.A.g.a	ENSGT00950000182881.a.b.a.b.z.b.c	ENSGT01000000220340	ENSGT00940000160322.c	ENSGT00940000158578.e.a
Coho salmon	MODERN SPECIES	6	rbmx (ENSOKIG00005009657)	ARHGEF6 (ENSOKIG00005009596)	cd40lg (ENSOKIG00005009584)	si:dkeyp-11e3.1 (ENSOKIG00005009578)	ENSOKIG00005009575	ENSOKIG00005009566	fhl1a (ENSOKIG00005009545)	slc9a6a (ENSOKIG00005008848)	TAF7 (ENSOKIG00005008723)	ENSOKIG00005008697	ENSOKIG00005008499	tmem35 (ENSOKIG00005008457)	xkrx (ENSOKIG00005008443)	nox1 (ENSOKIG00005008085)	ENSOKIG00005008051	ENSOKIG00005008017 #22	mid1ip1l (ENSOKIG00005008000)	tspan7 (ENSOKIG00005007963)	SRPX2 (ENSOKIG00005007922)	sytl4 (ENSOKIG00005007907)	ENSOKIG00005007896	AUP1 (ENSOKIG00005007880)	ENSOKIG00005007868	DGKQ (ENSOKIG00005007611)	NFKB1 (ENSOKIG00005007543)	UBE2D3 (ENSOKIG00005007460)	ENSOKIG00005007449	PRPF19 (ENSOKIG00005006783)	tcirg1b (ENSOKIG00005006618)	ENSOKIG00005006530	ENSOKIG00005006516
Chinook salmon	MODERN SPECIES	32	rbmx (ENSOTSG00005008662)	ARHGEF6 (ENSOTSG00005008629)	cd40lg (ENSOTSG00005008628)	si:dkeyp-11e3.1 (ENSOTSG00005008627)	ENSOTSG00005008626	ENSOTSG00005008624	fhl1a (ENSOTSG00005008622)	slc9a6a (ENSOTSG00005008170)	taf7 (ENSOTSG00005008154)	drp2 (ENSOTSG00005007407)	ENSOTSG00005007394	tmem35 (ENSOTSG00005007389)	xkrx (ENSOTSG00005007388)	nox1 (ENSOTSG00005003878)	cstf2 (ENSOTSG00005003819)	ENSOTSG00005003807 #22	mid1ip1l (ENSOTSG00005003802)	tspan7 (ENSOTSG00005003796)	SRPX2 (ENSOTSG00005003786)	sytl4 (ENSOTSG00005003776)	ENSOTSG00005003769	aup1 (ENSOTSG00005003763)	ENSOTSG00005003759	DGKQ (ENSOTSG00005003601)	NFKB1 (ENSOTSG00005003590)	UBE2D3 (ENSOTSG00005003574)	prpf19 (ENSOTSG00005002502)	tcirg1b (ENSOTSG00005002489)	ENSOTSG00005002472	ENSOTSG00005002468	ZBTB5 (ENSOTSG00005002465)
Rainbow trout	MODERN SPECIES	23	ENSOMYG00000042417	ENSOMYG00000065572	ENSOMYG00000040317	fhl1a (ENSOMYG00000040240)	ENSOMYG00000049722	slc9a6a (ENSOMYG00000038310)	taf7 (ENSOMYG00000037949)	ENSOMYG00000066495	drp2 (ENSOMYG00000037655)	CENPI (ENSOMYG00000037483)	tmem35 (ENSOMYG00000062195)	ENSOMYG00000067226	xkrx (ENSOMYG00000037407)	nox1 (ENSOMYG00000036643)	ENSOMYG00000036480	ENSOMYG00000036436 #22	ENSOMYG00000059459	m1ip1 (ENSOMYG00000036415)	tspan7 (ENSOMYG00000036396)	ENSOMYG00000036387	SYTL4 (ENSOMYG00000031297)	ENSOMYG00000061407	ENSOMYG00000066442	ENSOMYG00000031267	ENSOMYG00000031237	ENSOMYG00000031174	ENSOMYG00000030929	ENSOMYG00000030608	ENSOMYG00000060542	ENSOMYG00000030473	ENSOMYG00000030416
Salmo	ANCESTRAL SPECIES	43	ENSGT01100000263502.A.a.a.a.a.a.f	ENSGT00390000011545.b	ENSGT00940000156341.e.b.a	ENSGT01030000234935	ENSGT00950000182941.b.a.l	ENSGT00940000154833.b.c	ENSGT00940000153460.c.b.c.a.d	ENSGT00940000160861.m	ENSGT00940000153467.a.b.e.a	ENSGT00390000013235.i	ENSGT00940000154325.a.f	ENSGT00940000161284.f	ENSGT00390000003231.a.o.a	ENSGT00940000165729.c	ENSGT00940000158987.l	ENSGT00940000153737.a.l #22	ENSGT00500000044890.b.d	ENSGT00940000159092.p	ENSGT00940000159149.g	ENSGT00940000159060.i	ENSGT00940000153304.A	ENSGT00390000016110.i	ENSGT00940000154394.a.f	ENSGT00940000159492.e	ENSGT00940000158625.f	ENSGT00940000153169.A.b.b.e.b.a.b	ENSGT00940000153662.A.g.a	ENSGT00950000182881.a.b.a.b.z.b.c	ENSGT00390000006394.d	ENSGT00940000160322.c	ENSGT00940000158578.e.a
River trout	MODERN SPECIES	4	si:dkeyp-11e3.1 (ENSSTUG00000038268)	ENSSTUG00000038290	ENSSTUG00000038307	ENSSTUG00000038324	fhl1a (ENSSTUG00000038405)	slc9a6a (ENSSTUG00000038452)	taf7 (ENSSTUG00000038950)	drp2 (ENSSTUG00000039018)	ENSSTUG00000039296	CENPI (ENSSTUG00000039302)	tmem35 (ENSSTUG00000039366)	arl13a (ENSSTUG00000039378)	xkrx (ENSSTUG00000039417)	nox1 (ENSSTUG00000039424)	cstf2 (ENSSTUG00000039581)	ENSSTUG00000039589 #22	mid1ip1l (ENSSTUG00000039600)	ENSSTUG00000039606	tspan7 (ENSSTUG00000039612)	SRPX2 (ENSSTUG00000039637)	sytl4 (ENSSTUG00000039648)	ENSSTUG00000039669	aup1 (ENSSTUG00000039696)	DGKQ (ENSSTUG00000039746)	NFKB1 (ENSSTUG00000039971)	UBE2D3 (ENSSTUG00000041349)	ENSSTUG00000042047	prpf19 (ENSSTUG00000042054)	tcirg1b (ENSSTUG00000042308)	ENSSTUG00000042979	ENSSTUG00000043044
Atlantic salmon	MODERN SPECIES	28	ARHGEF6 (ENSSSAG00000063247)	ENSSSAG00000116023	cd40l (ENSSSAG00000063346)	si:dkeyp-11e3.1 (ENSSSAG00000063350)	MAP7D3 (ENSSSAG00000063381)	fhl1a (ENSSSAG00000063443)	slc9a6a (ENSSSAG00000063494)	taf7 (ENSSSAG00000064257)	drp2 (ENSSSAG00000064304)	CENPI (ENSSSAG00000066812)	tmem35 (ENSSSAG00000066891)	arl13a (ENSSSAG00000066898)	xkrx (ENSSSAG00000096391)	nox1 (ENSSSAG00000066942)	cstf2 (ENSSSAG00000068712)	ENSSSAG00000068723 #22	mid1ip1l (ENSSSAG00000068736)	tsn7 (ENSSSAG00000068743)	ENSSSAG00000068748	SYTL4 (ENSSSAG00000068758)	trmt12 (ENSSSAG00000068878)	ENSSSAG00000068882	ENSSSAG00000093130	ENSSSAG00000079005	ENSSSAG00000069187	ENSSSAG00000069207	ENSSSAG00000068788	vpp3 (ENSSSAG00000069309)	ENSSSAG00000069656	ENSSSAG00000069685	ENSSSAG00000069703
Huchen	MODERN SPECIES	1367						ENSHHUG00000036702	ENSHHUG00000036689	ENSHHUG00000036684	ENSHHUG00000036647	ENSHHUG00000036624	ENSHHUG00000036539	ENSHHUG00000036529	xkrx (ENSHHUG00000036526)	nox1 (ENSHHUG00000036132)	cstf2 (ENSHHUG00000036119)	ENSHHUG00000036116 #22	tspan7 (ENSHHUG00000036043)	SRPX2 (ENSHHUG00000036036)	sytl4 (ENSHHUG00000036012)	ENSHHUG00000036010	aup1 (ENSHHUG00000035973)	ENSHHUG00000035929	DGKQ (ENSHHUG00000035857)	NFKB1 (ENSHHUG00000035733)	UBE2D3 (ENSHHUG00000035380)	ENSHHUG00000035376	prpf19 (ENSHHUG00000035323)	tcirg1b (ENSHHUG00000035151)	mrpl18 (ENSHHUG00000035143)	ENSHHUG00000035123	ENSHHUG00000035119
Northern pike	MODERN SPECIES	3	cd40lg (ENSELUG00000003682)	si:dkeyp-11e3.1 (ENSELUG00000003688)	ENSELUG00000029774	ENSELUG00000003756	fhl1 (ENSELUG00000003783)	slc9a6a (ENSELUG00000003823)	taf7 (ENSELUG00000003861)	ENSELUG00000003887	drp2 (ENSELUG00000003910)	CENPI (ENSELUG00000003973)	tmem35 (ENSELUG00000028892)	arl13a (ENSELUG00000004004)	xkrx (ENSELUG00000004012)	nox1 (ENSELUG00000004029)	ENSELUG00000004079	ENSELUG00000025071 #22	mid1ip1l (ENSELUG00000004126)	tspan6 (ENSELUG00000004148)	SRPX2 (ENSELUG00000004167)	sytl4 (ENSELUG00000004207)	trmt12 (ENSELUG00000028601)	aup1 (ENSELUG00000004256)	ENSELUG00000004294	DGKQ (ENSELUG00000004386)	NFKB1 (ENSELUG00000004493)	UBE2D3 (ENSELUG00000004554)	prpf19 (ENSELUG00000004578)	tcirg1b (ENSELUG00000004598)	mrpl18 (ENSELUG00000024739)	SSH3 (ENSELUG00000004646)	ENSELUG00000004671
Acanthomorphata	ANCESTRAL SPECIES	1	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Euacanthomorphacea	ANCESTRAL SPECIES	10	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Percomorphaceae	ANCESTRAL SPECIES	11	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Tiger tail seahorse	MODERN SPECIES	332	ELP1 (ENSHCOG00000006585)	ARHGEF37 (ENSHCOG00000006428)	ENSHCOG00000006411	pde6a (ENSHCOG00000006357)	SLC26A2 (ENSHCOG00000006316)	HTR4 (ENSHCOG00000006309)	lman2 (ENSHCOG00000006284)	FAT2 (ENSHCOG00000006160)	mtnr1al (ENSHCOG00000005271)	SLC36A1 (ENSHCOG00000005254)	tmem35 (ENSHCOG00000005217)	arl13a (ENSHCOG00000005206)	xkrx (ENSHCOG00000005190)	nox1 (ENSHCOG00000005180)	cstf2 (ENSHCOG00000005157)	ENSHCOG00000005140 #22	tspan7 (ENSHCOG00000005093)	SRPX2 (ENSHCOG00000005080)	sytl4 (ENSHCOG00000005074)	trmt12 (ENSHCOG00000005050)	zdhhc9 (ENSHCOG00000000130) #20	SASH3 (ENSHCOG00000004974) #19	xpnpep2 (ENSHCOG00000004944) #18	apln (ENSHCOG00000004906)	ENSHCOG00000004894	ids (ENSHCOG00000004861)	dcps (ENSHCOG00000004819)	AFF2 (ENSHCOG00000004812)	ENSHCOG00000004775	fmr1 (ENSHCOG00000004757)	rab33a (ENSHCOG00000004726)
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Oryzias	ANCESTRAL SPECIES	33	ENSGT00940000165969	ENSGT00940000163347	ENSGT00940000156974.e.a	ENSGT00940000158878	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Oryzias_a	ANCESTRAL SPECIES	19	ENSGT00940000163347	ENSGT00940000156974.e.a	ENSGT00940000158878	ENSGT00940000164115.B.a.b.d.k.f	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Japanese Medaka HdrR	MODERN SPECIES	1	ENSORLG00000001623	ATP11C (ENSORLG00000001595)	ENSORLG00000027502	ENSORLG00000028996	FHL1 (ENSORLG00000001563)	slc9a6a (ENSORLG00000001549)	taf7 (ENSORLG00000001523)	ENSORLG00000001501	drp2 (ENSORLG00000001478)	CENPI (ENSORLG00000001450)	tmem35 (ENSORLG00000001428)	arl13a (ENSORLG00000001425)	xkrx (ENSORLG00000001416)	nox1 (ENSORLG00000001406)	cstf2 (ENSORLG00000001380)	ENSORLG00000030493 #22	tspan7 (ENSORLG00000001343)	SRPX2 (ENSORLG00000001311)	sytl4 (ENSORLG00000001298)	trmt12 (ENSORLG00000001280)	zdhhc9 (ENSORLG00000001271) #20	SASH3 (ENSORLG00000001261) #19	xpnpep2 (ENSORLG00000001251) #18	apln (ENSORLG00000027614)	ENSORLG00000001202	ocrl (ENSORLG00000001194) #16	ENSORLG00000001161	urp1 (ENSORLG00000029011)	clic2 (ENSORLG00000021812)	c1galt1c1 (ENSORLG00000001122)	mcts1 (ENSORLG00000030590)
Oryzias_b	ANCESTRAL SPECIES	23	ENSGT00940000165969	ENSGT00940000163347	ENSGT00940000156974.e.a	ENSGT00940000158878	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Javanese ricefish	MODERN SPECIES	1	zic6 (ENSOJAG00000005171)	ENSOJAG00000005192	ENSOJAG00000005365	ATP11C (ENSOJAG00000006504)	fhl1a (ENSOJAG00000010837)	slc9a6a (ENSOJAG00000010948)	taf7 (ENSOJAG00000012429)	ENSOJAG00000012743	drp2 (ENSOJAG00000012974)	CENPI (ENSOJAG00000013806)	tmem35 (ENSOJAG00000013976)	arl13a (ENSOJAG00000013997)	xkrx (ENSOJAG00000014010)	nox1 (ENSOJAG00000014026)	cstf2 (ENSOJAG00000014113)	ENSOJAG00000014135 #22	mid1ip1l (ENSOJAG00000014153)	tspan7 (ENSOJAG00000014175)	SRPX2 (ENSOJAG00000014201)	sytl4 (ENSOJAG00000014286)	trmt12 (ENSOJAG00000014348)	zdhhc9 (ENSOJAG00000014360) #20	SASH3 (ENSOJAG00000014380) #19	xpnpep2 (ENSOJAG00000014486) #18	ENSOJAG00000015860	ENSOJAG00000015868	ocrl (ENSOJAG00000015939) #16	ENSOJAG00000017259	clic2 (ENSOJAG00000017281)	urp1 (ENSOJAG00000017324)	c1galt1c1 (ENSOJAG00000017330)
Indian medaka	DUPLICATION
Indian medaka	MODERN SPECIES	16	ENSOMEG00000016638	ENSOMEG00000016574	ATP11C (ENSOMEG00000016393)	fhl1a (ENSOMEG00000016016)	slc9a6a (ENSOMEG00000015941)	taf7 (ENSOMEG00000015906)	ENSOMEG00000015853	drp2 (ENSOMEG00000015822)	CENPI (ENSOMEG00000015718)	tmem35 (ENSOMEG00000015629)	arl13a (ENSOMEG00000015603)	xkrx (ENSOMEG00000015570)	nox1 (ENSOMEG00000015550)	cstf2 (ENSOMEG00000015507)	ENSOMEG00000015442 #22	ENSOMEG00000015425 #22	tspan7 (ENSOMEG00000015365)	SRPX2 (ENSOMEG00000015312)	sytl4 (ENSOMEG00000015292)	trmt12 (ENSOMEG00000015267)	zdhhc9 (ENSOMEG00000015254) #20	SASH3 (ENSOMEG00000015234) #19	xpnpep2 (ENSOMEG00000015211) #18	apln (ENSOMEG00000015189)	ENSOMEG00000015185	ocrl (ENSOMEG00000015169) #16	ENSOMEG00000015120	clic2 (ENSOMEG00000015085)	urp1 (ENSOMEG00000015052)	c1galt1c1 (ENSOMEG00000015022)	mcts1 (ENSOMEG00000000379)
Indian medaka	MODERN SPECIES	16	zic6 (ENSOMEG00000016659)	ENSOMEG00000016638	ENSOMEG00000016574	ATP11C (ENSOMEG00000016393)	fhl1a (ENSOMEG00000016016)	slc9a6a (ENSOMEG00000015941)	taf7 (ENSOMEG00000015906)	ENSOMEG00000015853	drp2 (ENSOMEG00000015822)	CENPI (ENSOMEG00000015718)	tmem35 (ENSOMEG00000015629)	arl13a (ENSOMEG00000015603)	xkrx (ENSOMEG00000015570)	nox1 (ENSOMEG00000015550)	cstf2 (ENSOMEG00000015507)	ENSOMEG00000015442 #22	ENSOMEG00000015425 #22	tspan7 (ENSOMEG00000015365)	SRPX2 (ENSOMEG00000015312)	sytl4 (ENSOMEG00000015292)	trmt12 (ENSOMEG00000015267)	zdhhc9 (ENSOMEG00000015254) #20	SASH3 (ENSOMEG00000015234) #19	xpnpep2 (ENSOMEG00000015211) #18	apln (ENSOMEG00000015189)	ENSOMEG00000015185	ocrl (ENSOMEG00000015169) #16	ENSOMEG00000015120	clic2 (ENSOMEG00000015085)	urp1 (ENSOMEG00000015052)	c1galt1c1 (ENSOMEG00000015022)
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Aplocheiloidei	ANCESTRAL SPECIES	13	ENSGT01100000263502.A.a.a.a.a.a	ENSGT00940000174529	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Turquoise killifish	MODERN SPECIES	1610	clic2 (ENSNFUG00015000467)	URP1 (ENSNFUG00015000479)	c1galt1c1 (ENSNFUG00015000486)	MCTS1 (ENSNFUG00015000494)	CUL4B (ENSNFUG00015000659)	lamp2 (ENSNFUG00015000988)	ATP1B4 (ENSNFUG00015000998)	TMEM255A (ENSNFUG00015001009)	ZBTB33 (ENSNFUG00015001019)	ENSNFUG00015001021	ndufa1 (ENSNFUG00015001025)	arl13a (ENSNFUG00015001032)	XKRX (ENSNFUG00015001040)	nox1 (ENSNFUG00015001064)	CSTF2 (ENSNFUG00015001129)	CU459160.2 (ENSNFUG00015001137) #22	mid1ip1l (ENSNFUG00015001146)	TSPAN7 (ENSNFUG00015001151)	SRPX2 (ENSNFUG00015001160)	SYTL4 (ENSNFUG00015001181)	TRMT12 (ENSNFUG00015001193)	OLA.14942 (ENSNFUG00015001205)	HS6ST2 (ENSNFUG00015001208)	MBNL3 (ENSNFUG00015001223)	RAP2C (ENSNFUG00015001235) #37	Nfu_g_1_004759 (ENSNFUG00015001240)	ENSNFUG00015001262	FOXO4 (ENSNFUG00015001272)	ubl3b (ENSNFUG00015001282)	ENSNFUG00015001287	PRSS23 (ENSNFUG00015001292)
Mangrove rivulus	MODERN SPECIES	10	tmtops3a (ENSKMAG00000001581)	ENSKMAG00000001573	ENSKMAG00000001551	MAP7D3 (ENSKMAG00000001506)	fhl1a (ENSKMAG00000001465)	slc9a6a (ENSKMAG00000001437)	taf7 (ENSKMAG00000001397)	ENSKMAG00000001384	drp2 (ENSKMAG00000001275)	CENPI (ENSKMAG00000001168)	tmem35 (ENSKMAG00000001148)	arl13a (ENSKMAG00000001139)	xkrx (ENSKMAG00000001134)	nox1 (ENSKMAG00000001081)	cstf2 (ENSKMAG00000001068)	ENSKMAG00000001031 #22	mid1ip1l (ENSKMAG00000000988)	tspan7 (ENSKMAG00000000951)	SRPX2 (ENSKMAG00000000937)	sytl4 (ENSKMAG00000000923)	trmt12 (ENSKMAG00000000891)	zdhhc9 (ENSKMAG00000000842) #20	SASH3 (ENSKMAG00000000832) #19	xpnpep2 (ENSKMAG00000000804) #18	apln (ENSKMAG00000000787)	ENSKMAG00000000777	ENSKMAG00000000737	ocrl (ENSKMAG00000000622) #16	ENSKMAG00000000526	clic2 (ENSKMAG00000000486)	urp1 (ENSKMAG00000000477)
Cyprinodontoidei	ANCESTRAL SPECIES	23	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Platyfish	MODERN SPECIES	15	ENSXMAG00000023492	ENSXMAG00000026572	ENSXMAG00000023657	MAP7D3 (ENSXMAG00000013428)	fhl1a (ENSXMAG00000013439)	slc9a6a (ENSXMAG00000013445)	taf7 (ENSXMAG00000013459)	ENSXMAG00000013464	drp2 (ENSXMAG00000013469)	CENPI (ENSXMAG00000013478)	tmem35 (ENSXMAG00000013483)	arl13a (ENSXMAG00000013485)	xkrx (ENSXMAG00000026827)	nox1 (ENSXMAG00000013488)	cstf2 (ENSXMAG00000013524)	ENSXMAG00000013531 #22	ENSXMAG00000029843	tspan7 (ENSXMAG00000013532)	SRPX2 (ENSXMAG00000013538)	sytl4 (ENSXMAG00000013546)	trmt12 (ENSXMAG00000025318)	zdhhc9 (ENSXMAG00000013554) #20	SASH3 (ENSXMAG00000013558) #19	xpnpep2 (ENSXMAG00000013561) #18	apln (ENSXMAG00000013581)	ENSXMAG00000026082	ocrl (ENSXMAG00000013582) #16	ENSXMAG00000013602	clic2 (ENSXMAG00000023462)	urp1 (ENSXMAG00000025258)	c1galt1c1 (ENSXMAG00000019525)
Poecilia	ANCESTRAL SPECIES	33	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Guppy	MODERN SPECIES	440	ENSPREG00000010594	ENSPREG00000010601	ENSPREG00000010672	MAP7D3 (ENSPREG00000010713)	fhl1a (ENSPREG00000010837)	slc9a6a (ENSPREG00000010943)	taf7 (ENSPREG00000011318)	ENSPREG00000011339	drp2 (ENSPREG00000011351)	CENPI (ENSPREG00000011396)	tmem35 (ENSPREG00000011425)	arl13a (ENSPREG00000011435)	xkrx (ENSPREG00000011444)	nox1 (ENSPREG00000011456)	cstf2 (ENSPREG00000011481)	ENSPREG00000011500 #22	tspan7 (ENSPREG00000011560)	SRPX2 (ENSPREG00000011583)	ENSPREG00000011601	trmt12 (ENSPREG00000011621)	zdhhc9 (ENSPREG00000011667) #20	SASH3 (ENSPREG00000011701) #19	xpnpep2 (ENSPREG00000011720) #18	apln (ENSPREG00000011756)	ocrl (ENSPREG00000011774) #16	ENSPREG00000011885	clic2 (ENSPREG00000011905)	urp1 (ENSPREG00000011927)	c1galt1c1 (ENSPREG00000011966)	mcts1 (ENSPREG00000011974)	cul4b (ENSPREG00000011997)
NAME_6	ANCESTRAL SPECIES	41	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT00940000153259.b	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Amazon molly	MODERN SPECIES	494									drp2 (ENSPFOG00000016576)	CENPI (ENSPFOG00000016603)	tmem35 (ENSPFOG00000016701)	arl13a (ENSPFOG00000016707)	xkrx (ENSPFOG00000016721)	nox1 (ENSPFOG00000016731)	CSTF2T (ENSPFOG00000016756)	ENSPFOG00000016789 #22	mid1ip1l (ENSPFOG00000020880)	tspan7 (ENSPFOG00000016802)	SRPX2 (ENSPFOG00000016842)	sytl4 (ENSPFOG00000016875)	trmt12 (ENSPFOG00000016931)	zdhhc9 (ENSPFOG00000016952) #20	SASH3 (ENSPFOG00000016989) #19	xpnpep2 (ENSPFOG00000017029) #18	ENSPFOG00000022482	ocrl (ENSPFOG00000017105) #16	ENSPFOG00000017167	clic2 (ENSPFOG00000017189)	urp1 (ENSPFOG00000017210)	c1galt1c1 (ENSPFOG00000020881)	mcts1 (ENSPFOG00000017218)
Sailfin molly	MODERN SPECIES	686										CENPI (ENSPLAG00000000247)	tmem35 (ENSPLAG00000011318)	arl13a (ENSPLAG00000011307)	xkrx (ENSPLAG00000011277)	nox1 (ENSPLAG00000011235)	cstf2 (ENSPLAG00000011176)	ENSPLAG00000011167 #22	tspan7 (ENSPLAG00000011097)	SRPX2 (ENSPLAG00000011067)	ENSPLAG00000010969
NAME_4	ANCESTRAL SPECIES	23	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000175481	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Mummichog	DUPLICATION
Mummichog	MODERN SPECIES	2190	tmtops3a (ENSFHEG00000016798)	ENSFHEG00000016805	ENSFHEG00000016821	MAP7D3 (ENSFHEG00000016847)	fhl1a (ENSFHEG00000016870)	slc9a6a (ENSFHEG00000016916)	taf7 (ENSFHEG00000016936)	ENSFHEG00000000428	drp2 (ENSFHEG00000016976)	tmem35 (ENSFHEG00000016984)	arl13a (ENSFHEG00000017023)	xkrx (ENSFHEG00000017033)	nox1 (ENSFHEG00000000430)	cstf2 (ENSFHEG00000017065)	ENSFHEG00000017082 #22	ENSFHEG00000017089 #22	ENSFHEG00000017190	SRPX2 (ENSFHEG00000017213)	sytl4 (ENSFHEG00000017322)	trmt12 (ENSFHEG00000017338)	zdhhc9 (ENSFHEG00000017350) #20	SASH3 (ENSFHEG00000017371) #19	xpnpep2 (ENSFHEG00000017384) #18	apln (ENSFHEG00000017399)	ocrl (ENSFHEG00000017566) #16	ENSFHEG00000017585	clic2 (ENSFHEG00000017611)	urp1 (ENSFHEG00000017622)	c1galt1c1 (ENSFHEG00000017648)	mcts1 (ENSFHEG00000017670)	cul4b (ENSFHEG00000017732)
Mummichog	MODERN SPECIES	2190	cd40lg (ENSFHEG00000016794)	tmtops3a (ENSFHEG00000016798)	ENSFHEG00000016805	ENSFHEG00000016821	MAP7D3 (ENSFHEG00000016847)	fhl1a (ENSFHEG00000016870)	slc9a6a (ENSFHEG00000016916)	taf7 (ENSFHEG00000016936)	ENSFHEG00000000428	drp2 (ENSFHEG00000016976)	tmem35 (ENSFHEG00000016984)	arl13a (ENSFHEG00000017023)	xkrx (ENSFHEG00000017033)	nox1 (ENSFHEG00000000430)	cstf2 (ENSFHEG00000017065)	ENSFHEG00000017082 #22	ENSFHEG00000017089 #22	ENSFHEG00000017190	SRPX2 (ENSFHEG00000017213)	sytl4 (ENSFHEG00000017322)	trmt12 (ENSFHEG00000017338)	zdhhc9 (ENSFHEG00000017350) #20	SASH3 (ENSFHEG00000017371) #19	xpnpep2 (ENSFHEG00000017384) #18	apln (ENSFHEG00000017399)	ocrl (ENSFHEG00000017566) #16	ENSFHEG00000017585	clic2 (ENSFHEG00000017611)	urp1 (ENSFHEG00000017622)	c1galt1c1 (ENSFHEG00000017648)	mcts1 (ENSFHEG00000017670)
Sheepshead minnow	MODERN SPECIES	131										CENPI (ENSCVAG00000005849)	tmem35 (ENSCVAG00000005792)	arl13a (ENSCVAG00000005783)	xkrx (ENSCVAG00000005743)	nox1 (ENSCVAG00000005739)	cstf2 (ENSCVAG00000005731)	ENSCVAG00000005712 #22	ENSCVAG00000005674	tspan7 (ENSCVAG00000005643)	SRPX2 (ENSCVAG00000005630)	sytl4 (ENSCVAG00000005620)	trmt12 (ENSCVAG00000005590)	zdhhc9 (ENSCVAG00000005584) #20	SASH3 (ENSCVAG00000005564) #19	xpnpep2 (ENSCVAG00000005550) #18	ENSCVAG00000005533	ENSCVAG00000005522	ocrl (ENSCVAG00000005512) #16	ENSCVAG00000005305	clic2 (ENSCVAG00000005275)	urp1 (ENSCVAG00000005249)	c1galt1c1 (ENSCVAG00000005243)
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00940000174529	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Pomacentridae_A	ANCESTRAL SPECIES	20	ENSGT01100000263502.A.a.a.a.a.a	ENSGT00940000174529	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Amphiprion	ANCESTRAL SPECIES	17	ENSGT01100000263502.A.a.a.a.a.a	ENSGT00940000174529	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Clown anemonefish	MODERN SPECIES	1385							ptprfb (ENSAOCG00000020667)	ENSAOCG00000020684	ENSAOCG00000020695	FBXL14 (ENSAOCG00000020723)	wnt5b (ENSAOCG00000020751)	adipor2 (ENSAOCG00000020798)	xkrx (ENSAOCG00000020814)	nox1 (ENSAOCG00000020872)	cstf2 (ENSAOCG00000020905)	ENSAOCG00000020925 #22	tspan7 (ENSAOCG00000021028)	SRPX2 (ENSAOCG00000021072)
Orange clownfish	MODERN SPECIES	4	tmtops3a (ENSAPEG00000007131)	ENSAPEG00000007115	ENSAPEG00000007109	MAP7D3 (ENSAPEG00000007042)	fhl1a (ENSAPEG00000007000)	slc9a6a (ENSAPEG00000006932)	taf7 (ENSAPEG00000006881)	ENSAPEG00000006869	drp2 (ENSAPEG00000006813)	CENPI (ENSAPEG00000006683)	tmem35 (ENSAPEG00000006666)	arl13a (ENSAPEG00000006626)	xkrx (ENSAPEG00000006587)	nox1 (ENSAPEG00000006556)	cstf2 (ENSAPEG00000006526)	ENSAPEG00000006504 #22	tspan7 (ENSAPEG00000006421)	SRPX2 (ENSAPEG00000006398)	sytl4 (ENSAPEG00000006387)	trmt12 (ENSAPEG00000006335)	zdhhc9 (ENSAPEG00000006303) #20	SASH3 (ENSAPEG00000006262) #19	xpnpep2 (ENSAPEG00000006123) #18	apln (ENSAPEG00000006097)	ENSAPEG00000006045	ocrl (ENSAPEG00000006006) #16	ENSAPEG00000005987	clic2 (ENSAPEG00000005928)	urp1 (ENSAPEG00000005911)	c1galt1c1 (ENSAPEG00000005893)	mcts1 (ENSAPEG00000005866)
Spiny chromis	MODERN SPECIES	464		ENSAPOG00000006108	MAP7D3 (ENSAPOG00000006088)	fhl1a (ENSAPOG00000000779)	slc9a6a (ENSAPOG00000006035)	taf7 (ENSAPOG00000005952)	ENSAPOG00000005916	drp2 (ENSAPOG00000005838)	CENPI (ENSAPOG00000000879)	tmem35 (ENSAPOG00000005766)	arl13a (ENSAPOG00000005746)	xkrx (ENSAPOG00000005705)	nox1 (ENSAPOG00000005696)	cstf2 (ENSAPOG00000005630)	ENSAPOG00000000132	ENSAPOG00000005604 #22
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	238	ENSSPAG00000008708	MAP7D3 (ENSSPAG00000008732)	fhl1a (ENSSPAG00000008849)	slc9a6a (ENSSPAG00000008880)	taf7 (ENSSPAG00000008943)	ENSSPAG00000008988	drp2 (ENSSPAG00000009008)	ENSSPAG00000009058	CENPI (ENSSPAG00000009066)	tmem35 (ENSSPAG00000009085)	arl13a (ENSSPAG00000009109)	xkrx (ENSSPAG00000009184)	nox1 (ENSSPAG00000009191)	ENSSPAG00000009247	ENSSPAG00000009268 #22	ENSSPAG00000009303 #22	tspan7 (ENSSPAG00000009363)	SRPX2 (ENSSPAG00000009393)	sytl4 (ENSSPAG00000009410)	trmt12 (ENSSPAG00000009435)	zdhhc9 (ENSSPAG00000009454) #20	SASH3 (ENSSPAG00000009491) #19	xpnpep2 (ENSSPAG00000009506) #18	apln (ENSSPAG00000009538)	ENSSPAG00000009546	ocrl (ENSSPAG00000009581) #16	ENSSPAG00000009709	clic2 (ENSSPAG00000009738)	urp1 (ENSSPAG00000009762)	c1galt1c1 (ENSSPAG00000009774)	mcts1 (ENSSPAG00000009797)
Bicolor damselfish	MODERN SPECIES	238	ENSSPAG00000008691	ENSSPAG00000008708	MAP7D3 (ENSSPAG00000008732)	fhl1a (ENSSPAG00000008849)	slc9a6a (ENSSPAG00000008880)	taf7 (ENSSPAG00000008943)	ENSSPAG00000008988	drp2 (ENSSPAG00000009008)	ENSSPAG00000009058	CENPI (ENSSPAG00000009066)	tmem35 (ENSSPAG00000009085)	arl13a (ENSSPAG00000009109)	xkrx (ENSSPAG00000009184)	nox1 (ENSSPAG00000009191)	ENSSPAG00000009247	ENSSPAG00000009268 #22	ENSSPAG00000009303 #22	tspan7 (ENSSPAG00000009363)	SRPX2 (ENSSPAG00000009393)	sytl4 (ENSSPAG00000009410)	trmt12 (ENSSPAG00000009435)	zdhhc9 (ENSSPAG00000009454) #20	SASH3 (ENSSPAG00000009491) #19	xpnpep2 (ENSSPAG00000009506) #18	apln (ENSSPAG00000009538)	ENSSPAG00000009546	ocrl (ENSSPAG00000009581) #16	ENSSPAG00000009709	clic2 (ENSSPAG00000009738)	urp1 (ENSSPAG00000009762)	c1galt1c1 (ENSSPAG00000009774)
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Midas cichlid	MODERN SPECIES	396	ENSACIG00000011764	ENSACIG00000011770	ENSACIG00000011779	fhl1a (ENSACIG00000011822)	slc9a6a (ENSACIG00000011840)	taf7 (ENSACIG00000011869)	ENSACIG00000011906	drp2 (ENSACIG00000012123)	ENSACIG00000012174	tmem35 (ENSACIG00000012215)	ENSACIG00000012227	arl13a (ENSACIG00000012235)	xkrx (ENSACIG00000012264)	nox1 (ENSACIG00000012355)	cstf2 (ENSACIG00000012852)	ENSACIG00000012876 #22	ENSACIG00000012883	tspan7 (ENSACIG00000012906)	SRPX2 (ENSACIG00000012930)	ENSACIG00000012956	ENSACIG00000012970	trmt12 (ENSACIG00000012982)	zdhhc9 (ENSACIG00000013003) #20	SASH3 (ENSACIG00000013023) #19	xpnpep2 (ENSACIG00000013093) #18	ENSACIG00000013137	ocrl (ENSACIG00000013165) #16	ENSACIG00000013212	clic2 (ENSACIG00000013237)	urp1 (ENSACIG00000013252)	c1galt1c1 (ENSACIG00000013266)
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Nile tilapia	MODERN SPECIES	11	ENSONIG00000038284	MAP7D3 (ENSONIG00000002683)	fhl1a (ENSONIG00000002679)	slc9a6a (ENSONIG00000002673)	taf7 (ENSONIG00000002669)	ENSONIG00000037848	ENSONIG00000039319	ENSONIG00000037213	drp2 (ENSONIG00000002655)	CENPI (ENSONIG00000002648)	tmem35 (ENSONIG00000002647)	arl13a (ENSONIG00000002645)	xkrx (ENSONIG00000002643)	nox1 (ENSONIG00000002636)	cstf2 (ENSONIG00000002631)	ENSONIG00000002629 #22	mid1ip1l (ENSONIG00000034082)	tspan7 (ENSONIG00000002624)	srpx2 (ENSONIG00000040165)	sytl4 (ENSONIG00000002616)	trmt12 (ENSONIG00000002614)	zdhhc9 (ENSONIG00000002607) #20	SASH3 (ENSONIG00000002604) #19	xpnpep2 (ENSONIG00000002596) #18	ENSONIG00000029367	ENSONIG00000002594	ocrl (ENSONIG00000002581) #16	ENSONIG00000002580	clic2 (ENSONIG00000002575)	urp1 (ENSONIG00000002571)	c1galt1c1 (ENSONIG00000020860)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	24	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000175481	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	292	ENSNBRG00000021972	ENSNBRG00000021941	fhl1a (ENSNBRG00000021925)	ENSNBRG00000021906	taf7 (ENSNBRG00000021893)	ENSNBRG00000021885	ENSNBRG00000021878	drp2 (ENSNBRG00000021841)	CENPI (ENSNBRG00000021809)	tmem35 (ENSNBRG00000021788)	arl13a (ENSNBRG00000021766)	xkrx (ENSNBRG00000021754)	nox1 (ENSNBRG00000021722)	cstf2 (ENSNBRG00000021694)	ENSNBRG00000021686 #22	ENSNBRG00000021679 #22	tspan7 (ENSNBRG00000021632)	ENSNBRG00000021558	ENSNBRG00000021538	trmt12 (ENSNBRG00000021510)	zdhhc9 (ENSNBRG00000021482) #20	SASH3 (ENSNBRG00000021449) #19	xpnpep2 (ENSNBRG00000021361) #18	apln (ENSNBRG00000021347)	ocrl (ENSNBRG00000021219) #16	ENSNBRG00000021184	ece2b (ENSNBRG00000021150)	ENSNBRG00000021138	ENSNBRG00000021120	ENSNBRG00000021092	eif4h (ENSNBRG00000021071)
Lyretail cichlid	MODERN SPECIES	292	ENSNBRG00000021993	ENSNBRG00000021972	ENSNBRG00000021941	fhl1a (ENSNBRG00000021925)	ENSNBRG00000021906	taf7 (ENSNBRG00000021893)	ENSNBRG00000021885	ENSNBRG00000021878	drp2 (ENSNBRG00000021841)	CENPI (ENSNBRG00000021809)	tmem35 (ENSNBRG00000021788)	arl13a (ENSNBRG00000021766)	xkrx (ENSNBRG00000021754)	nox1 (ENSNBRG00000021722)	cstf2 (ENSNBRG00000021694)	ENSNBRG00000021686 #22	ENSNBRG00000021679 #22	tspan7 (ENSNBRG00000021632)	ENSNBRG00000021558	ENSNBRG00000021538	trmt12 (ENSNBRG00000021510)	zdhhc9 (ENSNBRG00000021482) #20	SASH3 (ENSNBRG00000021449) #19	xpnpep2 (ENSNBRG00000021361) #18	apln (ENSNBRG00000021347)	ocrl (ENSNBRG00000021219) #16	ENSNBRG00000021184	ece2b (ENSNBRG00000021150)	ENSNBRG00000021138	ENSNBRG00000021120	ENSNBRG00000021092
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000175481	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Burton s mouthbrooder	MODERN SPECIES	273	tmtops3a (ENSHBUG00000015441)	si:dkeyp-11e3.1 (ENSHBUG00000015456)	ENSHBUG00000015472	MAP7D3 (ENSHBUG00000015703)	fhl1a (ENSHBUG00000015767)	slc9a6a (ENSHBUG00000015832)	taf7 (ENSHBUG00000015899)	ENSHBUG00000015909	drp2 (ENSHBUG00000015928)	CENPI (ENSHBUG00000016033)	tmem35 (ENSHBUG00000016059)	arl13a (ENSHBUG00000016100)	xkrx (ENSHBUG00000016109)	nox1 (ENSHBUG00000016157)	cstf2 (ENSHBUG00000016183)	ENSHBUG00000016265 #22	ENSHBUG00000016337	tspan7 (ENSHBUG00000016351)	SRPX2 (ENSHBUG00000016371)	sytl4 (ENSHBUG00000016396)	trmt12 (ENSHBUG00000016412)	zdhhc9 (ENSHBUG00000016462) #20	SASH3 (ENSHBUG00000016484) #19	xpnpep2 (ENSHBUG00000016524) #18	apln (ENSHBUG00000016548)	ENSHBUG00000016583	ocrl (ENSHBUG00000016975) #16	ENSHBUG00000017042	clic2 (ENSHBUG00000017065)	urp1 (ENSHBUG00000017075)	c1galt1c1 (ENSHBUG00000017092)
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000175481	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00940000175481	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Eastern happy	MODERN SPECIES	11	ENSACLG00000000320	ENSACLG00000000323	ENSACLG00000000343	ENSACLG00000000364	fhl1a (ENSACLG00000000385)	slc9a6a (ENSACLG00000000428)	taf7 (ENSACLG00000000506)	ENSACLG00000000586	drp2 (ENSACLG00000000612)	CENPI (ENSACLG00000000672)	tmem35 (ENSACLG00000000728)	arl13a (ENSACLG00000000738)	xkrx (ENSACLG00000000760)	nox1 (ENSACLG00000000762)	cstf2 (ENSACLG00000000779)	ENSACLG00000000826 #22	ENSACLG00000000920	tspan7 (ENSACLG00000000955)	ENSACLG00000000975	SRPX2 (ENSACLG00000000980)	sytl4 (ENSACLG00000000994)	trmt12 (ENSACLG00000001008)	zdhhc9 (ENSACLG00000001014) #20	SASH3 (ENSACLG00000001063) #19	xpnpep2 (ENSACLG00000001072) #18	apln (ENSACLG00000001128)	ENSACLG00000001145	ocrl (ENSACLG00000001194) #16	ENSACLG00000001240	clic2 (ENSACLG00000001301)	urp1 (ENSACLG00000001340)
Zebra mbuna	MODERN SPECIES	1102	si:dkeyp-11e3.1 (ENSMZEG00005006590)	ENSMZEG00005006608	ENSMZEG00005006625	MAP7D3 (ENSMZEG00005006639)	fhl1a (ENSMZEG00005006725)	slc9a6a (ENSMZEG00005006749)	taf7 (ENSMZEG00005006820)	ENSMZEG00005006867	drp2 (ENSMZEG00005006921)	CENPI (ENSMZEG00005007021)	tmem35 (ENSMZEG00005007040)	arl13a (ENSMZEG00005007052)	xkrx (ENSMZEG00005007145)	nox1 (ENSMZEG00005007154)	cstf2 (ENSMZEG00005007200)	ENSMZEG00005007253 #22	ENSMZEG00005007279	tspan7 (ENSMZEG00005007299)	SRPX2 (ENSMZEG00005007311)	sytl4 (ENSMZEG00005007326)	trmt12 (ENSMZEG00005007349)	zdhhc9 (ENSMZEG00005007364) #20	SASH3 (ENSMZEG00005007395) #19	xpnpep2 (ENSMZEG00005007420) #18	apln (ENSMZEG00005007435)	ENSMZEG00005007445	ocrl (ENSMZEG00005007494) #16	ENSMZEG00005007671	clic2 (ENSMZEG00005007700)	urp1 (ENSMZEG00005007719)	c1galt1c1 (ENSMZEG00005007726)
P. nyererei	DUPLICATION
P. nyererei	MODERN SPECIES	303	ENSPNYG00000012252	ENSPNYG00000012224	ENSPNYG00000012176	fhl1a (ENSPNYG00000012134)	slc9a6a (ENSPNYG00000012068)	taf7 (ENSPNYG00000012014)	ENSPNYG00000011719	drp2 (ENSPNYG00000011582)	CENPI (ENSPNYG00000011533)	tmem35 (ENSPNYG00000011513)	arl13a (ENSPNYG00000011485)	xkrx (ENSPNYG00000011470)	nox1 (ENSPNYG00000011011)	cstf2 (ENSPNYG00000010852)	ENSPNYG00000010814 #22	ENSPNYG00000010798 #22	ENSPNYG00000010771	tspan7 (ENSPNYG00000010762)	SRPX2 (ENSPNYG00000010750)	ENSPNYG00000010731	ENSPNYG00000010719	trmt12 (ENSPNYG00000010696)	zdhhc9 (ENSPNYG00000010672) #20	SASH3 (ENSPNYG00000010628) #19	xpnpep2 (ENSPNYG00000010569) #18	apln (ENSPNYG00000010548)	ENSPNYG00000010520	ocrl (ENSPNYG00000010286) #16	ENSPNYG00000010191	clic2 (ENSPNYG00000010160)	urp1 (ENSPNYG00000010133)
P. nyererei	MODERN SPECIES	303	ENSPNYG00000012300	ENSPNYG00000012252	ENSPNYG00000012224	ENSPNYG00000012176	fhl1a (ENSPNYG00000012134)	slc9a6a (ENSPNYG00000012068)	taf7 (ENSPNYG00000012014)	ENSPNYG00000011719	drp2 (ENSPNYG00000011582)	CENPI (ENSPNYG00000011533)	tmem35 (ENSPNYG00000011513)	arl13a (ENSPNYG00000011485)	xkrx (ENSPNYG00000011470)	nox1 (ENSPNYG00000011011)	cstf2 (ENSPNYG00000010852)	ENSPNYG00000010814 #22	ENSPNYG00000010798 #22	ENSPNYG00000010771	tspan7 (ENSPNYG00000010762)	SRPX2 (ENSPNYG00000010750)	ENSPNYG00000010731	ENSPNYG00000010719	trmt12 (ENSPNYG00000010696)	zdhhc9 (ENSPNYG00000010672) #20	SASH3 (ENSPNYG00000010628) #19	xpnpep2 (ENSPNYG00000010569) #18	apln (ENSPNYG00000010548)	ENSPNYG00000010520	ocrl (ENSPNYG00000010286) #16	ENSPNYG00000010191	clic2 (ENSPNYG00000010160)
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000161661	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00940000164536.b	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397
Tetraodontidae	ANCESTRAL SPECIES	9	ENSGT00940000174529	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000017581.a	ENSGT00940000164351	ENSGT00940000156017.eb	ENSGT00940000162488.b.b	ENSGT00940000161206	ENSGT00950000183115.b.b	ENSGT01100000263536.A.a.b
Tetraodon	MODERN SPECIES		si:dkeyp-11e3.1 (ENSTNIG00000016847)	ENSTNIG00000016848	ENSTNIG00000016849	fhl1a (ENSTNIG00000016850)	slc9a6a (ENSTNIG00000016851)	taf7 (ENSTNIG00000016852)	ENSTNIG00000016853	drp2 (ENSTNIG00000016854)	CENPI (ENSTNIG00000001216)	tmem35 (ENSTNIG00000016855)	arl13a (ENSTNIG00000016856)	xkrx (ENSTNIG00000016857)	xkrx (ENSTNIG00000016858)	nox1 (ENSTNIG00000016859)	cstf2 (ENSTNIG00000016860)	ENSTNIG00000016861 #22	mid1ip1l (ENSTNIG00000016862)	tspan7 (ENSTNIG00000016863)	SRPX2 (ENSTNIG00000016864)	sytl4 (ENSTNIG00000016865)	trmt12 (ENSTNIG00000016866)	zdhhc9 (ENSTNIG00000016867) #20	ENSTNIG00000016868	TENT5D (ENSTNIG00000016869)	TBX22 (ENSTNIG00000016870)	ITM2A (ENSTNIG00000016871)	ENSTNIG00000019684	LPAR4 (ENSTNIG00000002953)	ENSTNIG00000002954	ENSTNIG00000002955	sybl1 (ENSTNIG00000004212)
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397
Ballan wrasse	MODERN SPECIES	237									drp2 (ENSLBEG00000028728)	CENPI (ENSLBEG00000028727)	tmem35 (ENSLBEG00000028725)	arl13a (ENSLBEG00000028724)	xkrx (ENSLBEG00000028723)	nox1 (ENSLBEG00000028722)	cstf2 (ENSLBEG00000028720)	ENSLBEG00000028719 #22	tspan7 (ENSLBEG00000028716)	SRPX2 (ENSLBEG00000028715)	sytl4 (ENSLBEG00000028714)	trmt12 (ENSLBEG00000028712)	zdhhc9 (ENSLBEG00000028711) #20	SASH3 (ENSLBEG00000028709) #19	xpnpep2 (ENSLBEG00000028708) #18	apln (ENSLBEG00000028707)	ENSLBEG00000028706	ocrl (ENSLBEG00000028705) #16	ENSLBEG00000028703	clic2 (ENSLBEG00000028702)	urp1 (ENSLBEG00000028701)	c1galt1c1 (ENSLBEG00000028700)	mcts1 (ENSLBEG00000028699)
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Perciformes	ANCESTRAL SPECIES	13	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.b.h ##22	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Lumpfish	MODERN SPECIES	1	ENSCLMG00005021853	ENSCLMG00005001282	ENSCLMG00005001295	fhl1a (ENSCLMG00005001309)	slc9a6a (ENSCLMG00005001626)	taf7 (ENSCLMG00005002689)	ENSCLMG00005002691	drp2 (ENSCLMG00005003200)	CENPI (ENSCLMG00005003204)	tmem35 (ENSCLMG00005003207)	arl13a (ENSCLMG00005003209)	xkrx (ENSCLMG00005003212)	nox1 (ENSCLMG00005003222)	cstf2 (ENSCLMG00005003515)	ENSCLMG00005003519 ##22	ENSCLMG00005003521 #22	mid1ip1l (ENSCLMG00005003522)	tspan7 (ENSCLMG00005003525)	SRPX2 (ENSCLMG00005003529)	sytl4 (ENSCLMG00005003535)	trmt12 (ENSCLMG00005003540)	zdhhc9 (ENSCLMG00005003541) #20	SASH3 (ENSCLMG00005003542) #19	xpnpep2 (ENSCLMG00005003548) #18	ENSCLMG00005003577	ocrl (ENSCLMG00005003590) #16	ENSCLMG00005005227	clic2 (ENSCLMG00005005261)	urp1 (ENSCLMG00005005262)	c1galt1c1 (ENSCLMG00005005263)	mcts1 (ENSCLMG00005005264)
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145
Channel bull blenny	MODERN SPECIES	1	si:dkeyp-11e3.1 (ENSCGOG00000020024)	ENSCGOG00000020017	ENSCGOG00000020012	MAP7D3 (ENSCGOG00000019999)	fhl1a (ENSCGOG00000019995)	slc9a6a (ENSCGOG00000019328)	taf7 (ENSCGOG00000019067)	ENSCGOG00000019049	drp2 (ENSCGOG00000019038)	CENPI (ENSCGOG00000019029)	tmem35 (ENSCGOG00000019025)	arl13a (ENSCGOG00000019021)	xkrx (ENSCGOG00000019018)	nox1 (ENSCGOG00000018735)	cstf2 (ENSCGOG00000018720)	ENSCGOG00000018715 #22	mid1ip1l (ENSCGOG00000018711)	tspan7 (ENSCGOG00000018672)	SRPX2 (ENSCGOG00000018631)	ENSCGOG00000018628	trmt12 (ENSCGOG00000018627)	zdhhc9 (ENSCGOG00000018625) #20	SASH3 (ENSCGOG00000018620) #19	xpnpep2 (ENSCGOG00000018449) #18	ENSCGOG00000018438	ocrl (ENSCGOG00000018221) #16	ENSCGOG00000018211	clic2 (ENSCGOG00000018209)	urp1 (ENSCGOG00000018208)	c1galt1c1 (ENSCGOG00000018206)	mcts1 (ENSCGOG00000018174)
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Gilthead seabream	MODERN SPECIES	9	cd40lg (ENSSAUG00010008522)	tmtops3a (ENSSAUG00010008524)	ENSSAUG00010008527	MAP7D3 (ENSSAUG00010008529)	fhl1a (ENSSAUG00010008541)	slc9a6a (ENSSAUG00010008601)	taf7 (ENSSAUG00010010510)	ENSSAUG00010010861	drp2 (ENSSAUG00010010875)	CENPI (ENSSAUG00010013699)	tmem35 (ENSSAUG00010013773)	arl13a (ENSSAUG00010013775)	xkrx (ENSSAUG00010013778)	nox1 (ENSSAUG00010013782)	cstf2 (ENSSAUG00010014095)	ENSSAUG00010014100 #22	mid1ip1l (ENSSAUG00010014106)	tspan7 (ENSSAUG00010014108)	SRPX2 (ENSSAUG00010014113)	sytl4 (ENSSAUG00010014118)	trmt12 (ENSSAUG00010014124)	zdhhc9 (ENSSAUG00010014125) #20	SASH3 (ENSSAUG00010014129) #19	xpnpep2 (ENSSAUG00010014147) #18	ENSSAUG00010014265	ocrl (ENSSAUG00010014282) #16	ENSSAUG00010015432	clic2 (ENSSAUG00010015433)	urp1 (ENSSAUG00010015491)	c1galt1c1 (ENSSAUG00010015492)	mcts1 (ENSSAUG00010015494)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Large yellow croaker	MODERN SPECIES		cd40lg (ENSLCRG00005008737)	tmtops3a (ENSLCRG00005008736)	ENSLCRG00005008734	MAP7D3 (ENSLCRG00005008730)	fhl1a (ENSLCRG00005008727)	slc9a6a (ENSLCRG00005005153)	taf7 (ENSLCRG00005005133)	ENSLCRG00005004964	drp2 (ENSLCRG00005004806)	CENPI (ENSLCRG00005004773)	tmem35 (ENSLCRG00005004759)	arl13a (ENSLCRG00005004752)	xkrx (ENSLCRG00005004748)	nox1 (ENSLCRG00005004453)	cstf2 (ENSLCRG00005004445)	ENSLCRG00005004433 #22	mid1ip1l (ENSLCRG00005004424)	tspan7 (ENSLCRG00005004419)	SRPX2 (ENSLCRG00005004412)	sytl4 (ENSLCRG00005004408)	trmt12 (ENSLCRG00005004404)	zdhhc9 (ENSLCRG00005004402) #20	SASH3 (ENSLCRG00005004401) #19	xpnpep2 (ENSLCRG00005004362) #18	apln (ENSLCRG00005004345)	ocrl (ENSLCRG00005001713) #16	ENSLCRG00005001471	clic2 (ENSLCRG00005001455)	urp1 (ENSLCRG00005017959)	c1galt1c1 (ENSLCRG00005017958)	mcts1 (ENSLCRG00005017956)
European seabass	DUPLICATION
European seabass	MODERN SPECIES	12	ENSDLAG00005010715	ENSDLAG00005010699	ENSDLAG00005010402	fhl1a (ENSDLAG00005010366)	slc9a6a (ENSDLAG00005009261)	taf7 (ENSDLAG00005009174)	ENSDLAG00005009164	drp2 (ENSDLAG00005008933)	CENPI (ENSDLAG00005008820)	tmem35 (ENSDLAG00005029191)	arl13a (ENSDLAG00005008809)	xkrx (ENSDLAG00005008794)	nox1 (ENSDLAG00005007928)	cstf2 (ENSDLAG00005007820)	ENSDLAG00005007796 #22	ENSDLAG00005030604 #22	mid1ip1l (ENSDLAG00005034884)	tspan7 (ENSDLAG00005007775)	ENSDLAG00005007740	SYTL4 (ENSDLAG00005007634)	zdhhc9 (ENSDLAG00005035140) #20	SASH3 (ENSDLAG00005007598) #19	xpnpep2 (ENSDLAG00005007392) #18	ENSDLAG00005007371	ENSDLAG00005027231	ocrl (ENSDLAG00005005238) #16	ENSDLAG00005005120	clic2 (ENSDLAG00005005108)	urp1 (ENSDLAG00005005100)	C1GALT1C1 (ENSDLAG00005028234)	mcts1 (ENSDLAG00005026448)
European seabass	MODERN SPECIES	12	ENSDLAG00005010750	ENSDLAG00005010715	ENSDLAG00005010699	ENSDLAG00005010402	fhl1a (ENSDLAG00005010366)	slc9a6a (ENSDLAG00005009261)	taf7 (ENSDLAG00005009174)	ENSDLAG00005009164	drp2 (ENSDLAG00005008933)	CENPI (ENSDLAG00005008820)	tmem35 (ENSDLAG00005029191)	arl13a (ENSDLAG00005008809)	xkrx (ENSDLAG00005008794)	nox1 (ENSDLAG00005007928)	cstf2 (ENSDLAG00005007820)	ENSDLAG00005007796 #22	ENSDLAG00005030604 #22	mid1ip1l (ENSDLAG00005034884)	tspan7 (ENSDLAG00005007775)	ENSDLAG00005007740	SYTL4 (ENSDLAG00005007634)	zdhhc9 (ENSDLAG00005035140) #20	SASH3 (ENSDLAG00005007598) #19	xpnpep2 (ENSDLAG00005007392) #18	ENSDLAG00005007371	ENSDLAG00005027231	ocrl (ENSDLAG00005005238) #16	ENSDLAG00005005120	clic2 (ENSDLAG00005005108)	urp1 (ENSDLAG00005005100)	C1GALT1C1 (ENSDLAG00005028234)
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00940000156341.e.b	ENSGT01030000234935	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Climbing perch	MODERN SPECIES	1	ENSATEG00000017547	ENSATEG00000017569	ENSATEG00000025999	MAP7D3 (ENSATEG00000017585)	fhl1a (ENSATEG00000028079)	slc9a6a (ENSATEG00000017703)	taf7 (ENSATEG00000017767)	ENSATEG00000017829	drp2 (ENSATEG00000018041)	CENPI (ENSATEG00000018095)	tmem35 (ENSATEG00000018105)	arl13a (ENSATEG00000018113)	xkrx (ENSATEG00000018164)	nox1 (ENSATEG00000018169)	cstf2 (ENSATEG00000018186)	ENSATEG00000018219 #22	mid1ip1l (ENSATEG00000029233)	tspan7 (ENSATEG00000018251)	ENSATEG00000018274	SYTL4 (ENSATEG00000018293)	trmt12 (ENSATEG00000018316)	zdhhc9 (ENSATEG00000018338) #20	SASH3 (ENSATEG00000018363) #19	xpnpep2 (ENSATEG00000018382) #18	apln (ENSATEG00000028428)	ocrl (ENSATEG00000018445) #16	ENSATEG00000018469	ENSATEG00000027404	clic2 (ENSATEG00000018502)	urp1 (ENSATEG00000018530)	C1GALT1C1 (ENSATEG00000018572)
Zig-zag eel	MODERN SPECIES	1	ENSMAMG00000020572	ENSMAMG00000020569	ENSMAMG00000020565	MAP7D3 (ENSMAMG00000020555)	fhl1a (ENSMAMG00000020548)	slc9a6a (ENSMAMG00000020524)	taf7 (ENSMAMG00000020513)	ENSMAMG00000020426	drp2 (ENSMAMG00000020408)	CENPI (ENSMAMG00000020398)	tmem35 (ENSMAMG00000027904)	arl13a (ENSMAMG00000020385)	xkrx (ENSMAMG00000020382)	nox1 (ENSMAMG00000020378)	cstf2 (ENSMAMG00000028209)	ENSMAMG00000026905 #22	mid1ip1l (ENSMAMG00000020348)	tspan7 (ENSMAMG00000020336)	ENSMAMG00000020328	SYTL4 (ENSMAMG00000020318)	trmt12 (ENSMAMG00000020311)	zdhhc9 (ENSMAMG00000020303) #20	SASH3 (ENSMAMG00000020298) #19	xpnpep2 (ENSMAMG00000020280) #18	ENSMAMG00000026379	ocrl (ENSMAMG00000020233) #16	ENSMAMG00000026034	clic2 (ENSMAMG00000020180)	urp1 (ENSMAMG00000020174)	C1GALT1C1 (ENSMAMG00000020172)	mcts1 (ENSMAMG00000020164)
Carangaria	ANCESTRAL SPECIES	15	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Pleuronectoidei	ANCESTRAL SPECIES	19	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000158987	ENSGT00940000153737.a #22	ENSGT00500000044890.b	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000174555	ENSGT00950000184267	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471
Turbot	DUPLICATION
Turbot	MODERN SPECIES	4	ENSSMAG00000014507	ENSSMAG00000014489	MAP7D3 (ENSSMAG00000014289)	slc9a6a (ENSSMAG00000014210)	taf7 (ENSSMAG00000014177)	fhl1a (ENSSMAG00000014260)	ENSSMAG00000013761	drp2 (ENSSMAG00000013635)	CENPI (ENSSMAG00000013589)	tmem35 (ENSSMAG00000028027)	arl13a (ENSSMAG00000013557)	xkrx (ENSSMAG00000013552)	nox1 (ENSSMAG00000013490)	cstf2 (ENSSMAG00000013463)	ENSSMAG00000013440 #22	ENSSMAG00000030750 #22	mid1ip1l (ENSSMAG00000031745)	tspan7 (ENSSMAG00000013355)	ENSSMAG00000013273	SYTL4 (ENSSMAG00000013257)	trmt12 (ENSSMAG00000013247)	zdhhc9 (ENSSMAG00000013239) #20	SASH3 (ENSSMAG00000013234) #19	xpnpep2 (ENSSMAG00000013218) #18	ENSSMAG00000013212	ocrl (ENSSMAG00000013174) #16	ENSSMAG00000037650	clic2 (ENSSMAG00000013119)	urp1 (ENSSMAG00000027422)	C1GALT1C1 (ENSSMAG00000013084)	mcts1 (ENSSMAG00000013065)
Turbot	MODERN SPECIES	4	ENSSMAG00000014515	ENSSMAG00000014507	ENSSMAG00000014489	MAP7D3 (ENSSMAG00000014289)	slc9a6a (ENSSMAG00000014210)	taf7 (ENSSMAG00000014177)	fhl1a (ENSSMAG00000014260)	ENSSMAG00000013761	drp2 (ENSSMAG00000013635)	CENPI (ENSSMAG00000013589)	tmem35 (ENSSMAG00000028027)	arl13a (ENSSMAG00000013557)	xkrx (ENSSMAG00000013552)	nox1 (ENSSMAG00000013490)	cstf2 (ENSSMAG00000013463)	ENSSMAG00000013440 #22	ENSSMAG00000030750 #22	mid1ip1l (ENSSMAG00000031745)	tspan7 (ENSSMAG00000013355)	ENSSMAG00000013273	SYTL4 (ENSSMAG00000013257)	trmt12 (ENSSMAG00000013247)	zdhhc9 (ENSSMAG00000013239) #20	SASH3 (ENSSMAG00000013234) #19	xpnpep2 (ENSSMAG00000013218) #18	ENSSMAG00000013212	ocrl (ENSSMAG00000013174) #16	ENSSMAG00000037650	clic2 (ENSSMAG00000013119)	urp1 (ENSSMAG00000027422)	C1GALT1C1 (ENSSMAG00000013084)
Tongue sole	MODERN SPECIES	6	cul4b (ENSCSEG00000002108)	mcts1 (ENSCSEG00000002120)	c1galt1c1 (ENSCSEG00000002125)	urp1 (ENSCSEG00000002136)	clic2 (ENSCSEG00000002126)	ENSCSEG00000002143	drp2 (ENSCSEG00000002166)	ENSCSEG00000002196	ENSCSEG00000002204	ENSCSEG00000002209	arl13a (ENSCSEG00000002533)	tmem35 (ENSCSEG00000002535)	xkrx (ENSCSEG00000002537)	nox1 (ENSCSEG00000002542)	ENSCSEG00000002596	ENSCSEG00000002632 #22	mid1ip1l (ENSCSEG00000002652)	tspan7 (ENSCSEG00000002655)	SRPX2 (ENSCSEG00000002661)	sytl4 (ENSCSEG00000002668)	trmt12 (ENSCSEG00000002675)	zdhhc9 (ENSCSEG00000002680) #20	zgc:153146 (ENSCSEG00000002693)	hvcn1 (ENSCSEG00000002703)	ENSCSEG00000002706	taf7 (ENSCSEG00000002713)	ENSCSEG00000002730	ocrl (ENSCSEG00000002795) #16	ENSCSEG00000002811	apln (ENSCSEG00000002818)	ENSCSEG00000002820
Carangaria_A	ANCESTRAL SPECIES	17	ENSGT00390000011545	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000161661	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999 #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00390000014020	ENSGT00940000164536.b	ENSGT00940000157996 #16	ENSGT00940000163305.a.b	ENSGT00940000161397	ENSGT00670000099471	ENSGT00940000155145	ENSGT00550000074964
Seriola	ANCESTRAL SPECIES	32	ENSGT00940000174529	ENSGT00940000156341.e.b	ENSGT00940000177286	ENSGT00950000182941.b.a	ENSGT00940000154833.b	ENSGT00940000153460.c.b.c.a	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a	ENSGT00940000161284	ENSGT00390000003231.a	ENSGT00940000165729	ENSGT00940000161661	ENSGT00940000153737.a #22	ENSGT00940000159092	ENSGT00940000159149
Yellowtail amberjack	MODERN SPECIES	2573										CENPI (ENSSLDG00000009929)	tmem35 (ENSSLDG00000009953)	arl13a (ENSSLDG00000009973)	xkrx (ENSSLDG00000010006)	nox1 (ENSSLDG00000010021)	ENSSLDG00000010056	ENSSLDG00000010096 #22	tspan7 (ENSSLDG00000010172)	SRPX2 (ENSSLDG00000010211)
Greater amberjack	MODERN SPECIES	113	ENSSDUG00000000476	ENSSDUG00000000500	ENSSDUG00000000516	MAP7D3 (ENSSDUG00000000536)	fhl1a (ENSSDUG00000000559)	slc9a6a (ENSSDUG00000000635)	taf7 (ENSSDUG00000000702)	ENSSDUG00000000761	drp2 (ENSSDUG00000000801)	CENPI (ENSSDUG00000000899)	tmem35 (ENSSDUG00000000919)	arl13a (ENSSDUG00000000933)	xkrx (ENSSDUG00000000960)	nox1 (ENSSDUG00000000983)	ENSSDUG00000001049	ENSSDUG00000001067 #22	tspan7 (ENSSDUG00000001123)	SRPX2 (ENSSDUG00000001152)	ppid (ENSSDUG00000001182)	etfdh (ENSSDUG00000001229)	rxfp1 (ENSSDUG00000001280)	tmem144b (ENSSDUG00000001335)	GASK1B (ENSSDUG00000001354)	ENSSDUG00000001359	gria2b (ENSSDUG00000001381)	glrbb (ENSSDUG00000001441)	PDGFC (ENSSDUG00000001476)	neil3 (ENSSDUG00000001511)	aga (ENSSDUG00000001544)	TENM3 (ENSSDUG00000001588) ##9	ENSSDUG00000001731
Barramundi perch	MODERN SPECIES	122	ENSLCAG00010016592	ENSLCAG00010016587	ENSLCAG00010016583	MAP7D3 (ENSLCAG00010016573)	fhl1a (ENSLCAG00010016555)	slc9a6a (ENSLCAG00010016488)	taf7 (ENSLCAG00010016445)	ENSLCAG00010016432	drp2 (ENSLCAG00010016426)	CENPI (ENSLCAG00010016411)	tmem35 (ENSLCAG00010016405)	arl13a (ENSLCAG00010016402)	xkrx (ENSLCAG00010016399)	nox1 (ENSLCAG00010016359)	ENSLCAG00010016349	ENSLCAG00010016340 #22	tspan7 (ENSLCAG00010016316)	SRPX2 (ENSLCAG00010016307)	sytl4 (ENSLCAG00010016299)	ENSLCAG00010016297	trmt12 (ENSLCAG00010016294)	zdhhc9 (ENSLCAG00010016292) #20
Pinecone sodierfish	MODERN SPECIES	1	ENSMMDG00005001872	ENSMMDG00005001868	ENSMMDG00005001859	fhl1a (ENSMMDG00005001856)	slc9a6a (ENSMMDG00005001816)	taf7 (ENSMMDG00005001770)	ENSMMDG00005001156	drp2 (ENSMMDG00005019449)	CENPI (ENSMMDG00005019398)	tmem35 (ENSMMDG00005019387)	ENSMMDG00005019386	arl13a (ENSMMDG00005019383)	xkrx (ENSMMDG00005019381)	nox1 (ENSMMDG00005019276)	cstf2 (ENSMMDG00005019265)	ENSMMDG00005019263 #22	mid1ip1l (ENSMMDG00005019262)	tspan7 (ENSMMDG00005019259)	SRPX2 (ENSMMDG00005019246)	sytl4 (ENSMMDG00005019243)	trmt12 (ENSMMDG00005019241)	zdhhc9 (ENSMMDG00005019239) #20	SASH3 (ENSMMDG00005019230) #19	xpnpep2 (ENSMMDG00005019220) #18	ENSMMDG00005019212	ocrl (ENSMMDG00005017046) #16	ENSMMDG00005017014	clic2 (ENSMMDG00005017003)	urp1 (ENSMMDG00005017000)	c1galt1c1 (ENSMMDG00005016999)	mcts1 (ENSMMDG00005016998)
Cod	MODERN SPECIES	1	ENSGMOG00000004974	drp2 (ENSGMOG00000004989)	CENPI (ENSGMOG00000005030)	tmem35 (ENSGMOG00000036974)	arl13a (ENSGMOG00000005087)	xkrx (ENSGMOG00000005111)	nox1 (ENSGMOG00000005121)	cstf2 (ENSGMOG00000005145)	mid1ip1l (ENSGMOG00000028803)	tspan7 (ENSGMOG00000005225)	ENSGMOG00000005238	SYTL4 (ENSGMOG00000005253)	zdhhc9 (ENSGMOG00000005283) #20	SASH3 (ENSGMOG00000005306) #19	xpnpep2 (ENSGMOG00000005338) #18	ENSGMOG00000023833 #22	ocrl (ENSGMOG00000005366) #16	ENSGMOG00000005419	clic2 (ENSGMOG00000005434)	urp1 (ENSGMOG00000026552)	ENSGMOG00000020191	ENSGMOG00000005450	ENSGMOG00000005532	ENSGMOG00000030469	ENSGMOG00000032759	hspa4b (ENSGMOG00000005602)	gnpda1 (ENSGMOG00000005643)	ENSGMOG00000024027	fgf1a (ENSGMOG00000005658)	nr3c1 (ENSGMOG00000005668)	kctd16a (ENSGMOG00000005691)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	140							ENSGT00940000164465.a.b	ENSGT00940000160861	ENSGT00390000001289.b.a	ENSGT00940000153467.a.b	ENSGT00390000013235	ENSGT00940000154325.a.b	ENSGT00390000003231.a.q	ENSGT00940000165729.f	ENSGT00940000158987	ENSGT00940000153737.a.`b.a #22	ENSGT00940000159092	ENSGT00940000159149.i	ENSGT00940000159060	ENSGT00940000153304.A	ENSGT00940000159999.a #20	ENSGT00940000160111 #19	ENSGT00940000157196 #18	ENSGT00950000184267.a	ENSGT00940000157996.j #16	ENSGT00940000163305.a.b	ENSGT00940000161397.f	ENSGT00670000099471	ENSGT00940000155145.`c	ENSGT00550000074964	ENSGT00940000155339.nb
Asian bonytongue	MODERN SPECIES	4	DIAPH2 (ENSSFOG00015007312)	glra4a (ENSSFOG00015031955)	gla (ENSSFOG00015007260)	ENSSFOG00015029667	BTK (ENSSFOG00015007024)	zgc:101583 (ENSSFOG00015006965)	taf7 (ENSSFOG00015006894)	ENSSFOG00015006596	drp2 (ENSSFOG00015006489)	ENSSFOG00015006417	tmem35 (ENSSFOG00015027121)	xkrx (ENSSFOG00015006399)	ENSSFOG00015006382	cstf2 (ENSSFOG00015006348)	ENSSFOG00015006313 #22	ENSSFOG00015026783 #22	tspan7 (ENSSFOG00015027728)	SRPX2 (ENSSFOG00015006143)	sytl4 (ENSSFOG00015006110)	trmt12 (ENSSFOG00015006090)	zdhhc9 (ENSSFOG00015027828) #20	SASH3 (ENSSFOG00015006052) #19	xpnpep2 (ENSSFOG00015006015) #18	ENSSFOG00015005999	ocrl (ENSSFOG00015005935) #16	ENSSFOG00015005852	ENSSFOG00015032114	urp1 (ENSSFOG00015005786)	c1galt1c1 (ENSSFOG00015005772)	mcts1 (ENSSFOG00015005757)	cul4b (ENSSFOG00015005718)
P. kingsleyae	MODERN SPECIES	568														xkrx (ENSPKIG00000005149)	cstf2 (ENSPKIG00000005033)	ENSPKIG00000004956 #22	tspan7 (ENSPKIG00000004885)	SRPX2 (ENSPKIG00000004826)	sytl4 (ENSPKIG00000004712)	trmt12 (ENSPKIG00000004640)	zdhhc9 (ENSPKIG00000004595) #20	SASH3 (ENSPKIG00000004567) #19
Osteoglossiformes	ANCESTRAL SPECIES	275	ENSGT00940000178841	ENSGT00940000159162.e	ENSGT00940000157822	ENSGT00940000158789.c	ENSGT00390000008751.b	ENSGT00940000165687.a	ENSGT00940000161656	ENSGT00940000158469	ENSGT00940000154661	ENSGT00940000164465.b	ENSGT00940000154325.a.a	ENSGT00940000161284	ENSGT00390000003231.a.r	ENSGT00940000165729.e	ENSGT00390000008142 #21	ENSGT00940000153737.a.`b.b #22	ENSGT00500000044890.b	ENSGT00940000159149.j	ENSGT00940000159999.b #20
Asian bonytongue	MODERN SPECIES	5	med12 (ENSSFOG00015009315)	aifm1 (ENSSFOG00015009530) #24	ENSSFOG00015033085	PCDH19 (ENSSFOG00015007391)	glra4a (ENSSFOG00015031343)	ENSSFOG00015009732	BTK (ENSSFOG00015009780)	timm8a (ENSSFOG00015028804)	zgc:101583 (ENSSFOG00015009814)	DRP2 (ENSSFOG00015009851)	TMEM35A (ENSSFOG00015026572)	arl13a (ENSSFOG00015010065)	ENSSFOG00015010125	nox1 (ENSSFOG00015010204)	si:dkey-251i10.3 (ENSSFOG00015010260) #21	ENSSFOG00015031316 #22	mid1ip1l (ENSSFOG00015031175)	SRPX2 (ENSSFOG00015010347)	zdhhc9 (ENSSFOG00015010405) #20	ENSSFOG00015010447	ocrl (ENSSFOG00015010512) #16	clic2 (ENSSFOG00015010636)	c1galt1c1 (ENSSFOG00015010656)	CUL4B (ENSSFOG00015010668)	LAMP2 (ENSSFOG00015010718)	ATP1B4 (ENSSFOG00015026216)	ENSSFOG00015027976	TMEM255A (ENSSFOG00015010769)	zbtb33 (ENSSFOG00015010783)	AKAP14 (ENSSFOG00015010796)	si:dkey-251i10.2 (ENSSFOG00015010802)
P. kingsleyae	MODERN SPECIES	455					ENSPKIG00000013794	rpl36a (ENSPKIG00000013772)	BTK (ENSPKIG00000013740)	timm8a (ENSPKIG00000013715)	zgc:101583 (ENSPKIG00000013693)	DRP2 (ENSPKIG00000013625)	TMEM35A (ENSPKIG00000013592)	arl13a (ENSPKIG00000013558)	ENSPKIG00000013534	nox1 (ENSPKIG00000013484)	si:dkey-251i10.3 (ENSPKIG00000013424) #21	ENSPKIG00000013393 #22	SRPX2 (ENSPKIG00000013302)	zdhhc9 (ENSPKIG00000013235) #20
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000153737.a.ab #22
Asian bonytongue	MODERN SPECIES	4	pcdh19 (ENSSFOG00015009638)	DIAPH2 (ENSSFOG00015007312)	glra4a (ENSSFOG00015031955)	gla (ENSSFOG00015007260)	ENSSFOG00015029667	BTK (ENSSFOG00015007024)	zgc:101583 (ENSSFOG00015006965)	taf7 (ENSSFOG00015006894)	ENSSFOG00015006596	drp2 (ENSSFOG00015006489)	ENSSFOG00015006417	tmem35 (ENSSFOG00015027121)	xkrx (ENSSFOG00015006399)	ENSSFOG00015006382	cstf2 (ENSSFOG00015006348)	ENSSFOG00015006313 #22	ENSSFOG00015026783 #22	tspan7 (ENSSFOG00015027728)	SRPX2 (ENSSFOG00015006143)	sytl4 (ENSSFOG00015006110)	trmt12 (ENSSFOG00015006090)	zdhhc9 (ENSSFOG00015027828) #20	SASH3 (ENSSFOG00015006052) #19	xpnpep2 (ENSSFOG00015006015) #18	ENSSFOG00015005999	ocrl (ENSSFOG00015005935) #16	ENSSFOG00015005852	ENSSFOG00015032114	urp1 (ENSSFOG00015005786)	c1galt1c1 (ENSSFOG00015005772)	mcts1 (ENSSFOG00015005757)
Spotted gar	MODERN SPECIES	673	rpl36a (ENSLOCG00000015330)	gla (ENSLOCG00000015326)	BTK (ENSLOCG00000015322)	timm8a (ENSLOCG00000015321)	zgc:101583 (ENSLOCG00000015318)	taf7 (ENSLOCG00000015317)	ENSLOCG00000015314	drp2 (ENSLOCG00000015313)	CENPI (ENSLOCG00000015310)	tmem35 (ENSLOCG00000015309)	arl13a (ENSLOCG00000015307)	xkrx (ENSLOCG00000015306)	nox1 (ENSLOCG00000015303)	cstf2 (ENSLOCG00000015300)	si:dkey-251i10.3 (ENSLOCG00000015298) #21	ENSLOCG00000015296 #22	mid1ip1l (ENSLOCG00000017497)	tspan7 (ENSLOCG00000015294)	SRPX2 (ENSLOCG00000015293)	sytl4 (ENSLOCG00000015291)	trmt12 (ENSLOCG00000015290)	zdhhc9 (ENSLOCG00000015287) #20	SASH3 (ENSLOCG00000015281) #19	xpnpep2 (ENSLOCG00000015278) #18	apln (ENSLOCG00000015277)	ocrl (ENSLOCG00000015266) #16	ENSLOCG00000015263	clic2 (ENSLOCG00000015260)	urp1 (ENSLOCG00000015259)	c1galt1c1 (ENSLOCG00000017496)	mcts1 (ENSLOCG00000015255)
Reedfish	MODERN SPECIES	3	RPL36A (ENSECRG00000013145)	BTK (ENSECRG00000013113)	timm8a (ENSECRG00000013092)	zgc:101583 (ENSECRG00000013075)	taf7 (ENSECRG00000013045)	ENSECRG00000012950	drp2 (ENSECRG00000012866)	CENPI (ENSECRG00000012821)	tmem35 (ENSECRG00000012807)	ENSECRG00000012796	arl13a (ENSECRG00000012774)	xkrx (ENSECRG00000012760)	nox1 (ENSECRG00000012724)	cstf2 (ENSECRG00000012700)	si:dkey-251i10.3 (ENSECRG00000012671) #21	ENSECRG00000012653 #22	mid1ip1l (ENSECRG00000012641)	tspan7 (ENSECRG00000012624)	SRPX2 (ENSECRG00000012593)	sytl4 (ENSECRG00000012542)	trmt12 (ENSECRG00000012521)	zdhhc9 (ENSECRG00000012502) #20	SASH3 (ENSECRG00000012484) #19	xpnpep2 (ENSECRG00000012455) #18	ENSECRG00000012441	ocrl (ENSECRG00000012367) #16	ENSECRG00000012300	clic2 (ENSECRG00000012281)	c1galt1c1 (ENSECRG00000012265)	mcts1 (ENSECRG00000012244)	cul4b (ENSECRG00000012168)