Vertebrata	DUPLICATION
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b #22
Gnathostomata	ANCESTRAL SPECIES	152					ENSGT00730000111100 #32	ENSGT00390000002918.a.b #31	ENSGT00390000000022.b #30	ENSGT00390000004383 #29	ENSGT00940000154892 #28	ENSGT00390000018518 #27	ENSGT00940000154208.d	ENSGT00940000156578 #26	ENSGT00390000018542.a #25	ENSGT00440000039203 #24	ENSGT00940000161826.C	ENSGT00940000153840.a.b #22	ENSGT00940000155497 #20	ENSGT00940000155618 #19	ENSGT00940000153657.A #18	ENSGT00390000001347 #16
Euteleostomi	ANCESTRAL SPECIES	192										ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00390000001347 #16	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33
Sarcopterygii	ANCESTRAL SPECIES	213											ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33
Tetrapoda	ANCESTRAL SPECIES	76	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Theria	ANCESTRAL SPECIES	2	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00550000074840.z	ENSGT00900000141218
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Primates	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Simiiformes	ANCESTRAL SPECIES	27	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a ##16	ENSGT00390000001347.vb.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a ##16	ENSGT00390000001347.vb.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b ##16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000154846.b.k.a.c #21	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b.f #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339
Black snub-nosed monkey	MODERN SPECIES	311					ADSL (ENSRBIG00000033554) #11	SGSM3 (ENSRBIG00000010806) #12	MRTFA (ENSRBIG00000036684) #13	MCHR1 (ENSRBIG00000038995) #14	ENSRBIG00000040439 #15	ENSRBIG00000037095 #16	ENSRBIG00000042698 #17	XPNPEP3 (ENSRBIG00000043347) #18	RBX1 (ENSRBIG00000043855) #19	EP300 (ENSRBIG00000040546) #20	ENSRBIG00000032400 #21	L3MBTL2 (ENSRBIG00000029454) #22	CHADL (ENSRBIG00000044046) #23	RANGAP1 (ENSRBIG00000040255) #24	ZC3H7B (ENSRBIG00000013333) #25	TEF (ENSRBIG00000037619) #26	ENSRBIG00000030586 #27	ACO2 (ENSRBIG00000035174) #28	POLR3H (ENSRBIG00000040089) #29	CSDC2 (ENSRBIG00000039404) #30	PMM1 (ENSRBIG00000033292) #31	DESI1 (ENSRBIG00000035678) #32	ENSRBIG00000039794 #33
Golden snub-nosed monkey	MODERN SPECIES	575			GRAP2 (ENSRROG00000044364)	FAM83F (ENSRROG00000031286)	TNRC6B (ENSRROG00000031135)	ADSL (ENSRROG00000029868) #11	SGSM3 (ENSRROG00000036226) #12	MRTFA (ENSRROG00000042362) #13	MCHR1 (ENSRROG00000031131) #14	ENSRROG00000030379 #15	ENSRROG00000030895	ENSRROG00000033331 #16	XPNPEP3 (ENSRROG00000044414) #18	RBX1 (ENSRROG00000029154) #19	EP300 (ENSRROG00000037756) #20	L3MBTL2 (ENSRROG00000036118) #22	CHADL (ENSRROG00000039682) #23	RANGAP1 (ENSRROG00000045722) #24	ZC3H7B (ENSRROG00000033899) #25	TEF (ENSRROG00000045709) #26	PHF5A (ENSRROG00000038952) #27	ACO2 (ENSRROG00000005066) #28	POLR3H (ENSRROG00000033728) #29	CSDC2 (ENSRROG00000042848) #30	PMM1 (ENSRROG00000027395) #31	DESI1 (ENSRROG00000039283) #32	ENSRROG00000030297 #33	SNU13 (ENSRROG00000042542)	MEI1 (ENSRROG00000043986)	CCDC134 (ENSRROG00000030513)	SREBF2 (ENSRROG00000032435)
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b ##16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000154846.b.k.a.a #21	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b ##16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b ##16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00510000046986.n.b	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218
Olive baboon	MODERN SPECIES	7	CACNA1I (ENSPANG00000009111)	ENTHD1 (ENSPANG00000035473)	GRAP2 (ENSPANG00000020770)	FAM83F (ENSPANG00000016392)	TNRC6B (ENSPANG00000009271)	SGSM3 (ENSPANG00000009270) #12	MRTFA (ENSPANG00000024733) #13	MCHR1 (ENSPANG00000051238) #14	ENSPANG00000008275 #15	ENSPANG00000015759 ##16	DNAJB7 (ENSPANG00000050760)	XPNPEP3 (ENSPANG00000007027) #18	RBX1 (ENSPANG00000046052) #19	ENSPANG00000038187 #21	EP300 (ENSPANG00000015108) #20	L3MBTL2 (ENSPANG00000001305) #22	CHADL (ENSPANG00000001306) #23	RANGAP1 (ENSPANG00000019687) #24	ZC3H7B (ENSPANG00000019690) #25	TEF (ENSPANG00000037689) #26	ENSPANG00000047887	TOB2 (ENSPANG00000009655)	PHF5A (ENSPANG00000011337) #27	ENSPANG00000015758 #29	ACO2 (ENSPANG00000024107) #28	PMM1 (ENSPANG00000048796) #31	DESI1 (ENSPANG00000045717) #32	XRCC6 (ENSPANG00000001252) #33	SNU13 (ENSPANG00000038561)	ENSPANG00000045378	MEI1 (ENSPANG00000005138)
Cercopithecinae_d	ANCESTRAL SPECIES	17	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00510000046986.n.b	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077
Drill	MODERN SPECIES	751	ENTHD1 (ENSMLEG00000038046)	GRAP2 (ENSMLEG00000038063)	FAM83F (ENSMLEG00000034781)	TNRC6B (ENSMLEG00000041780)	ADSL (ENSMLEG00000039322) #11	SGSM3 (ENSMLEG00000039368) #12	MRTFA (ENSMLEG00000036191) #13	MCHR1 (ENSMLEG00000028467) #14	ENSMLEG00000036117	ENSMLEG00000023192 #15	ENSMLEG00000022771	ENSMLEG00000030298 #16	XPNPEP3 (ENSMLEG00000014699) #18	ENSMLEG00000044153 #19	EP300 (ENSMLEG00000039670) #20	L3MBTL2 (ENSMLEG00000021840) #22	CHADL (ENSMLEG00000037296) #23	RANGAP1 (ENSMLEG00000030778) #24	ZC3H7B (ENSMLEG00000037209) #25	TEF (ENSMLEG00000033784) #26	ENSMLEG00000004379	TOB2 (ENSMLEG00000011426)	PHF5A (ENSMLEG00000037662) #27	ACO2 (ENSMLEG00000031603) #28	POLR3H (ENSMLEG00000024568) #29	CSDC2 (ENSMLEG00000034612) #30	PMM1 (ENSMLEG00000030064) #31	DESI1 (ENSMLEG00000043217) #32	XRCC6 (ENSMLEG00000019869) #33	SNU13 (ENSMLEG00000042136)	MEI1 (ENSMLEG00000033254)
Sooty mangabey	MODERN SPECIES	103	GRAP2 (ENSCATG00000030826)	FAM83F (ENSCATG00000035519)	TNRC6B (ENSCATG00000029291)	ADSL (ENSCATG00000039632) #11	SGSM3 (ENSCATG00000037436) #12	MRTFA (ENSCATG00000044298) #13	MCHR1 (ENSCATG00000025929) #14	ENSCATG00000043953 #15	ENSCATG00000013183	ENSCATG00000041540 ##16	XPNPEP3 (ENSCATG00000035961) #18	RBX1 (ENSCATG00000036288) #19	ENSCATG00000033630	ENSCATG00000044606 #21	EP300 (ENSCATG00000043641) #20	L3MBTL2 (ENSCATG00000037314) #22	CHADL (ENSCATG00000040617) #23	RANGAP1 (ENSCATG00000001985) #24	ZC3H7B (ENSCATG00000037774) #25	TEF (ENSCATG00000034168) #26	ENSCATG00000022368	TOB2 (ENSCATG00000021391)	PHF5A (ENSCATG00000012251) #27	ACO2 (ENSCATG00000030437) #28	POLR3H (ENSCATG00000018316) #29	CSDC2 (ENSCATG00000035356) #30	PMM1 (ENSCATG00000041928) #31	DESI1 (ENSCATG00000000926) #32	XRCC6 (ENSCATG00000042366) #33	SNU13 (ENSCATG00000038628)	MEI1 (ENSCATG00000039577)
Macaca	ANCESTRAL SPECIES	20	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.b.a.a ##16	ENSGT00940000163470	ENSGT00390000001347.vb.a.a.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Pig-tailed macaque	MODERN SPECIES	329	ENTHD1 (ENSMNEG00000043784)	GRAP2 (ENSMNEG00000044139)	FAM83F (ENSMNEG00000033076)	TNRC6B (ENSMNEG00000042745)	ADSL (ENSMNEG00000036502) #11	SGSM3 (ENSMNEG00000031385) #12	MRTFA (ENSMNEG00000031219) #13	MCHR1 (ENSMNEG00000030314) #14	SLC25A17 (ENSMNEG00000038810) #15	ENSMNEG00000033494	ENSMNEG00000013783 ##17	ENSMNEG00000031373 ##16	XPNPEP3 (ENSMNEG00000028410) #18	ENSMNEG00000038287 #19	EP300 (ENSMNEG00000043056) #20	L3MBTL2 (ENSMNEG00000044141) #22	CHADL (ENSMNEG00000036193) #23	RANGAP1 (ENSMNEG00000036291) #24	ZC3H7B (ENSMNEG00000036730) #25	TEF (ENSMNEG00000020616) #26	ENSMNEG00000006468	ENSMNEG00000010834	TOB2 (ENSMNEG00000020529)	PHF5A (ENSMNEG00000045104) #27	ACO2 (ENSMNEG00000044522) #28	POLR3H (ENSMNEG00000022264) #29	CSDC2 (ENSMNEG00000027703) #30	PMM1 (ENSMNEG00000021815) #31	DESI1 (ENSMNEG00000030194) #32	XRCC6 (ENSMNEG00000035076) #33	ENSMNEG00000033195
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.b.a.a ##16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000154846.b.k.a.a #21	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Crab-eating macaque	MODERN SPECIES	1	FAM83F (ENSMFAG00000002020)	ENSMFAG00000048080	ENSMFAG00000049257	TNRC6B (ENSMFAG00000003862)	ADSL (ENSMFAG00000039307) #11	SGSM3 (ENSMFAG00000032498) #12	MRTFA (ENSMFAG00000046410) #13	MCHR1 (ENSMFAG00000045345) #14	SLC25A17 (ENSMFAG00000042964) #15	ST13 (ENSMFAG00000035459) ##16	DNAJB7 (ENSMFAG00000051541)	XPNPEP3 (ENSMFAG00000040751) #18	ENSMFAG00000040152 #19	ENSMFAG00000059794 #21	EP300 (ENSMFAG00000039593) #20	L3MBTL2 (ENSMFAG00000037650) #22	RANGAP1 (ENSMFAG00000040386) #24	ZC3H7B (ENSMFAG00000037965) #25	TEF (ENSMFAG00000033476) #26	TOB2 (ENSMFAG00000019801)	PHF5A (ENSMFAG00000003129) #27	ENSMFAG00000047419	POLR3H (ENSMFAG00000001153) #29	ACO2 (ENSMFAG00000043571) #28	CSDC2 (ENSMFAG00000060068) #30	PMM1 (ENSMFAG00000034090) #31	ENSMFAG00000007408	ENSMFAG00000034617	ENSMFAG00000056431	XRCC6 (ENSMFAG00000003352) #33	SNU13 (ENSMFAG00000031096)
Rhesus	MODERN SPECIES	1	FAM83F (ENSMMUG00000017166)	TNRC6B (ENSMMUG00000021345)	ADSL (ENSMMUG00000005341) #11	SGSM3 (ENSMMUG00000008135) #12	ENSMMUG00000050905	MRTFA (ENSMMUG00000020411) #13	MCHR1 (ENSMMUG00000017371) #14	SLC25A17 (ENSMMUG00000008106) #15	ST13 (ENSMMUG00000019118) ##16	DNAJB7 (ENSMMUG00000065211)	XPNPEP3 (ENSMMUG00000004067) #18	RBX1 (ENSMMUG00000047625) #19	ENSMMUG00000058288	ENSMMUG00000040029 #21	EP300 (ENSMMUG00000000893) #20	L3MBTL2 (ENSMMUG00000014164) #22	CHADL (ENSMMUG00000014165) #23	RANGAP1 (ENSMMUG00000014166) #24	ZC3H7B (ENSMMUG00000005219) #25	TEF (ENSMMUG00000005221) #26	TOB2 (ENSMMUG00000002554)	PHF5A (ENSMMUG00000065330) #27	POLR3H (ENSMMUG00000001459) #29	ACO2 (ENSMMUG00000001454) #28	CSDC2 (ENSMMUG00000062477) #30	PMM1 (ENSMMUG00000001853) #31	DESI1 (ENSMMUG00000050219) #32	XRCC6 (ENSMMUG00000001856) #33	SNU13 (ENSMMUG00000042546)	ENSMMUG00000007290	MEI1 (ENSMMUG00000031012)
Vervet Monkey	MODERN SPECIES	10	ENTHD1 (ENSCSAG00000006073)	GRAP2 (ENSCSAG00000006067)	FAM83F (ENSCSAG00000006058)	TNRC6B (ENSCSAG00000006021)	ADSL (ENSCSAG00000006001) #11	SGSM3 (ENSCSAG00000005995) #12	MRTFA (ENSCSAG00000005969) #13	MCHR1 (ENSCSAG00000005961) #14	SLC25A17 (ENSCSAG00000005926) #15	ENSCSAG00000005882 ##16	ENSCSAG00000019281 #17	XPNPEP3 (ENSCSAG00000005861) #18	RBX1 (ENSCSAG00000005849) #19	EP300 (ENSCSAG00000005846) #20	ENSCSAG00000019282 #21	L3MBTL2 (ENSCSAG00000005839) #22	CHADL (ENSCSAG00000005836) #23	RANGAP1 (ENSCSAG00000005830) #24	ZC3H7B (ENSCSAG00000005824) #25	TEF (ENSCSAG00000005816) #26	TOB2 (ENSCSAG00000019283)	PHF5A (ENSCSAG00000005811) #27	ACO2 (ENSCSAG00000005807) #28	POLR3H (ENSCSAG00000005798) #29	CSDC2 (ENSCSAG00000005794) #30	PMM1 (ENSCSAG00000005792) #31	DESI1 (ENSCSAG00000005787) #32	XRCC6 (ENSCSAG00000005784) #33	SNU13 (ENSCSAG00000005776)	ENSCSAG00000005774	MEI1 (ENSCSAG00000005763)
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.g #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.g #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Pan	ANCESTRAL SPECIES	23	ENSGT00940000160998	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000015537.ab	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00910000146844.a.a	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00910000148068	ENSGT00390000018518 #27	ENSGT00940000154892.f #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.g #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Chimpanzee	MODERN SPECIES	13	FAM83F (ENSPTRG00000014405)	TNRC6B (ENSPTRG00000047826)	ADSL (ENSPTRG00000014407) #11	SGSM3 (ENSPTRG00000014408) #12	MRTFA (ENSPTRG00000014409) #13	MCHR1 (ENSPTRG00000014411) #14	SLC25A17 (ENSPTRG00000014412) #15	ENSPTRG00000049457	ST13 (ENSPTRG00000044653) ##16	ENSPTRG00000047105	XPNPEP3 (ENSPTRG00000014415) #18	DNAJB7 (ENSPTRG00000014416)	RBX1 (ENSPTRG00000014417) #19	ENSPTRG00000041697	EP300 (ENSPTRG00000014418) #20	L3MBTL2 (ENSPTRG00000014419) #22	CHADL (ENSPTRG00000014420) #23	RANGAP1 (ENSPTRG00000023600) #24	ZC3H7B (ENSPTRG00000014424) #25	TEF (ENSPTRG00000014425) #26	ENSPTRG00000043552	PHF5A (ENSPTRG00000014427) #27	ACO2 (ENSPTRG00000014428) #28	POLR3H (ENSPTRG00000051865) #29	CSDC2 (ENSPTRG00000044110) #30	PMM1 (ENSPTRG00000014432) #31	DESI1 (ENSPTRG00000014433) #32	XRCC6 (ENSPTRG00000022548) #33	SNU13 (ENSPTRG00000014435)	ENSPTRG00000041505	MEI1 (ENSPTRG00000014436)
Bonobo	MODERN SPECIES	13	ENSPPAG00000012346	TNRC6B (ENSPPAG00000028514)	ADSL (ENSPPAG00000029448) #11	SGSM3 (ENSPPAG00000031514) #12	MRTFA (ENSPPAG00000020762) #13	MCHR1 (ENSPPAG00000030244) #14	SLC25A17 (ENSPPAG00000038151) #15	ENSPPAG00000036400	ST13 (ENSPPAG00000003665) ##16	ENSPPAG00000034722	XPNPEP3 (ENSPPAG00000037292) #18	DNAJB7 (ENSPPAG00000025760)	RBX1 (ENSPPAG00000031663) #19	ENSPPAG00000035289	EP300 (ENSPPAG00000032679) #20	L3MBTL2 (ENSPPAG00000040643) #22	ENSPPAG00000040223 #23	RANGAP1 (ENSPPAG00000037749) #24	ZC3H7B (ENSPPAG00000034228) #25	TEF (ENSPPAG00000035585) #26	ENSPPAG00000032847	PHF5A (ENSPPAG00000008422) #27	ACO2 (ENSPPAG00000019653) #28	POLR3H (ENSPPAG00000031000) #29	CSDC2 (ENSPPAG00000032112) #30	PMM1 (ENSPPAG00000034355) #31	DESI1 (ENSPPAG00000035138) #32	XRCC6 (ENSPPAG00000037167) #33	SNU13 (ENSPPAG00000026299)	ENSPPAG00000028172	MEI1 (ENSPPAG00000029081)
Human	MODERN SPECIES	14	ENTHD1 (ENSG00000176177)	GRAP2 (ENSG00000100351)	TMA7B (ENSG00000225528)	FAM83F (ENSG00000133477)	TNRC6B (ENSG00000100354)	ADSL (ENSG00000239900) #11	SGSM3 (ENSG00000100359) #12	MRTFA (ENSG00000196588) #13	MCHR1 (ENSG00000128285) #14	SLC25A17 (ENSG00000100372) #15	ST13 (ENSG00000100380) ##16	XPNPEP3 (ENSG00000196236) #18	DNAJB7 (ENSG00000172404)	RBX1 (ENSG00000100387) #19	EP300 (ENSG00000100393) #20	L3MBTL2 (ENSG00000100395) #22	CHADL (ENSG00000100399) #23	RANGAP1 (ENSG00000100401) #24	ZC3H7B (ENSG00000100403) #25	TEF (ENSG00000167074) #26	TOB2 (ENSG00000183864)	ACO2 (ENSG00000100412) #28	PHF5A (ENSG00000100410) #27	POLR3H (ENSG00000100413) #29	CSDC2 (ENSG00000172346) #30	PMM1 (ENSG00000100417) #31	DESI1 (ENSG00000100418) #32	XRCC6 (ENSG00000196419) #33	SNU13 (ENSG00000100138)	MEI1 (ENSG00000167077)	CCDC134 (ENSG00000100147)
Gorilla	MODERN SPECIES	13	FAM83F (ENSGGOG00000006871)	ENSGGOG00000037611	TNRC6B (ENSGGOG00000008444)	ENSGGOG00000015110 #11	SGSM3 (ENSGGOG00000015169) #12	MRTFA (ENSGGOG00000015180) #13	SLC25A17 (ENSGGOG00000022781) #15	ENSGGOG00000023835	ENSGGOG00000043660	ST13 (ENSGGOG00000026747) ##16	ENSGGOG00000042004	DNAJB7 (ENSGGOG00000003936)	ENSGGOG00000003524 #19	ENSGGOG00000025031	EP300 (ENSGGOG00000008201) #20	L3MBTL2 (ENSGGOG00000013451) #22	CHADL (ENSGGOG00000013462) #23	RANGAP1 (ENSGGOG00000013473) #24	ZC3H7B (ENSGGOG00000014138) #25	TEF (ENSGGOG00000043695) #26	PHF5A (ENSGGOG00000001104) #27	ACO2 (ENSGGOG00000001107) #28	POLR3H (ENSGGOG00000038191) #29	CSDC2 (ENSGGOG00000037916) #30	PMM1 (ENSGGOG00000025969) #31	DESI1 (ENSGGOG00000015877) #32	XRCC6 (ENSGGOG00000015885) #33	SNU13 (ENSGGOG00000015898)	MEI1 (ENSGGOG00000004400)	CCDC134 (ENSGGOG00000012055)	SREBF2 (ENSGGOG00000012065)
Orangutan	MODERN SPECIES	13	RPS19BP1 (ENSPPYG00000011843)	CACNA1I (ENSPPYG00000011844)	ENTHD1 (ENSPPYG00000011845)	GRAP2 (ENSPPYG00000011846)	FAM83F (ENSPPYG00000011847)	TNRC6B (ENSPPYG00000011849)	SGSM3 (ENSPPYG00000011851) #12	MRTFA (ENSPPYG00000011852) #13	ENSPPYG00000035357	MCHR1 (ENSPPYG00000031606) #14	SLC25A17 (ENSPPYG00000011856) #15	ST13 (ENSPPYG00000011858) ##16	XPNPEP3 (ENSPPYG00000011859) #18	RBX1 (ENSPPYG00000011861) #19	EP300 (ENSPPYG00000011862) #20	L3MBTL2 (ENSPPYG00000011863) #22	CHADL (ENSPPYG00000011864) #23	ENSPPYG00000040861	RANGAP1 (ENSPPYG00000011865) #24	ZC3H7B (ENSPPYG00000011866) #25	TEF (ENSPPYG00000011867) #26	TOB2 (ENSPPYG00000011869)	ENSPPYG00000011870 #27	ACO2 (ENSPPYG00000011871) #28	ENSPPYG00000011872 #29	CSDC2 (ENSPPYG00000036694) #30	ENSPPYG00000011875 #31	XRCC6 (ENSPPYG00000011876) #33	ENSPPYG00000033456	ENSPPYG00000033524	ENSPPYG00000031869
Gibbon	MODERN SPECIES	22	CACNA1I (ENSNLEG00000015272)	ENTHD1 (ENSNLEG00000015289)	GRAP2 (ENSNLEG00000015291)	FAM83F (ENSNLEG00000015307)	TNRC6B (ENSNLEG00000015311)	ADSL (ENSNLEG00000015322) #11	SGSM3 (ENSNLEG00000034921) #12	MRTFA (ENSNLEG00000015359) #13	ENSNLEG00000015367 #14	SLC25A17 (ENSNLEG00000034097) #15	ST13 (ENSNLEG00000015378) ##16	DNAJB7 (ENSNLEG00000015434)	XPNPEP3 (ENSNLEG00000029969) #18	RBX1 (ENSNLEG00000028919) #19	EP300 (ENSNLEG00000015440) #20	L3MBTL2 (ENSNLEG00000015454) #22	CHADL (ENSNLEG00000015463) #23	RANGAP1 (ENSNLEG00000015464) #24	ZC3H7B (ENSNLEG00000015470) #25	TEF (ENSNLEG00000015473) #26	ENSNLEG00000015481 #27	ACO2 (ENSNLEG00000015482) #28	POLR3H (ENSNLEG00000015536) #29	ENSNLEG00000015551 #30	PMM1 (ENSNLEG00000015555) #31	DESI1 (ENSNLEG00000015592) #32	XRCC6 (ENSNLEG00000015610) #33	SNU13 (ENSNLEG00000027284)	ENSNLEG00000030585	MEI1 (ENSNLEG00000015634)	CCDC134 (ENSNLEG00000015642)
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.`b #19	ENSGT00940000163470	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518.w.a #27	ENSGT00940000154208.d	ENSGT00390000018518.x #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.`b #19	ENSGT00940000163470	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518.w.a #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.a.a.b ##33	ENSGT00940000153239.B.j.b #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077
Cebidae_a	ANCESTRAL SPECIES	40	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518.w.a #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.j.a.a.b ##33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339
Bolivian squirrel monkey	MODERN SPECIES	94	RPS19BP1 (ENSSBOG00000016421)	CACNA1I (ENSSBOG00000034043)	ENTHD1 (ENSSBOG00000028101)	GRAP2 (ENSSBOG00000028271)	FAM83F (ENSSBOG00000024462)	TNRC6B (ENSSBOG00000029743)	ADSL (ENSSBOG00000030059) #11	SGSM3 (ENSSBOG00000027400) #12	MRTFA (ENSSBOG00000019487) #13	MCHR1 (ENSSBOG00000036058) #14	SLC25A17 (ENSSBOG00000022585) #15	ENSSBOG00000029053 ##16	XPNPEP3 (ENSSBOG00000034216) #18	RBX1 (ENSSBOG00000023412) #19	EP300 (ENSSBOG00000027132) #20	L3MBTL2 (ENSSBOG00000028967) #22	CHADL (ENSSBOG00000032007) #23	ENSSBOG00000022447 #24	ZC3H7B (ENSSBOG00000034962) #25	TEF (ENSSBOG00000024378) #26	ENSSBOG00000015322	ENSSBOG00000025096 #27	ENSSBOG00000029050 #28	POLR3H (ENSSBOG00000020652) #29	CSDC2 (ENSSBOG00000035590) #30	PMM1 (ENSSBOG00000035346) #31	DESI1 (ENSSBOG00000023969) #32	ENSSBOG00000024724 ##33	ENSSBOG00000024134	MEI1 (ENSSBOG00000026823)	CCDC134 (ENSSBOG00000030156)
Capuchin	MODERN SPECIES	435											ENSCCAG00000027368	XPNPEP3 (ENSCCAG00000024069) #18	RBX1 (ENSCCAG00000037465) #19	EP300 (ENSCCAG00000036735) #20	ENSCCAG00000035552	L3MBTL2 (ENSCCAG00000001271) #22	CHADL (ENSCCAG00000031153) #23	ENSCCAG00000024962 #24	ZC3H7B (ENSCCAG00000027974) #25	TEF (ENSCCAG00000033688) #26	ENSCCAG00000037141 #27	ACO2 (ENSCCAG00000028378) #28	POLR3H (ENSCCAG00000025802) #29	CSDC2 (ENSCCAG00000029849) #30	PMM1 (ENSCCAG00000034441) #31	DESI1 (ENSCCAG00000037020) #32	ENSCCAG00000030468 ##33	ENSCCAG00000031213	MEI1 (ENSCCAG00000033076)	CCDC134 (ENSCCAG00000019608)	SREBF2 (ENSCCAG00000025566)
Marmoset	MODERN SPECIES		CACNA1I (ENSCJAG00000044108)	ENTHD1 (ENSCJAG00000002696)	GRAP2 (ENSCJAG00000056000)	FAM83F (ENSCJAG00000002721)	TNRC6B (ENSCJAG00000002732)	ADSL (ENSCJAG00000002764) #11	SGSM3 (ENSCJAG00000002827) #12	MRTFA (ENSCJAG00000002850) #13	MCHR1 (ENSCJAG00000002884) #14	SLC25A17 (ENSCJAG00000004636) #15	ENSCJAG00000004644 ##16	XPNPEP3 (ENSCJAG00000004718) #18	DNAJB7 (ENSCJAG00000004759)	RBX1 (ENSCJAG00000004763) #19	EP300 (ENSCJAG00000004770) #20	L3MBTL2 (ENSCJAG00000004817) #22	CHADL (ENSCJAG00000043984) #23	RANGAP1 (ENSCJAG00000004844) #24	ZC3H7B (ENSCJAG00000004889) #25	TEF (ENSCJAG00000004977) #26	TOB2 (ENSCJAG00000038649)	PHF5A (ENSCJAG00000004999) #27	POLR3H (ENSCJAG00000005072) #29	ENSCJAG00000075226	ENSCJAG00000010682	SMARCB1 (ENSCJAG00000046335)	MMP11 (ENSCJAG00000010798)	CHCHD10 (ENSCJAG00000010824)	C22orf15 (ENSCJAG00000010833)	VPREB3 (ENSCJAG00000010848)	ZNF70 (ENSCJAG00000038628)
Mas night monkey	MODERN SPECIES	1154																L3MBTL2 (ENSANAG00000029131) #22	ENSANAG00000022120 #23	ENSANAG00000025645 #23	ENSANAG00000032854 #24	ZC3H7B (ENSANAG00000026268) #25	TEF (ENSANAG00000034941) #26	ENSANAG00000028988 #27	ACO2 (ENSANAG00000029281) #28	POLR3H (ENSANAG00000025122) #29	CSDC2 (ENSANAG00000020803) #30	PMM1 (ENSANAG00000027683) #31	DESI1 (ENSANAG00000033964) #32	XRCC6 (ENSANAG00000018684) #33	SNU13 (ENSANAG00000023772)	MEI1 (ENSANAG00000030252)	CCDC134 (ENSANAG00000030858)
Tarsier	MODERN SPECIES	6440															EP300 (ENSTSYG00000001247) #20	L3MBTL2 (ENSTSYG00000009799) #22	CHADL (ENSTSYG00000026762) #23
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164
Lemuriformes_a	ANCESTRAL SPECIES	38	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164
Coquerels sifaka	MODERN SPECIES	131	RPS19BP1 (ENSPCOG00000013622)	CACNA1I (ENSPCOG00000019621)	ENTHD1 (ENSPCOG00000024799)	GRAP2 (ENSPCOG00000027684)	FAM83F (ENSPCOG00000016351)	TNRC6B (ENSPCOG00000020790)	ADSL (ENSPCOG00000014684) #11	SGSM3 (ENSPCOG00000014433) #12	MRTFA (ENSPCOG00000018452) #13	MCHR1 (ENSPCOG00000008960) #14	SLC25A17 (ENSPCOG00000024201) #15	ENSPCOG00000024193	ENSPCOG00000024901 #18	RBX1 (ENSPCOG00000016863) #19	EP300 (ENSPCOG00000021644) #20	L3MBTL2 (ENSPCOG00000024552) #22	CHADL (ENSPCOG00000028654) #23	RANGAP1 (ENSPCOG00000028740) #24	ZC3H7B (ENSPCOG00000024031) #25	TEF (ENSPCOG00000013129) #26	PHF5A (ENSPCOG00000014332) #27	ACO2 (ENSPCOG00000017488) #28	POLR3H (ENSPCOG00000013751) #29	CSDC2 (ENSPCOG00000024484) #30	ENSPCOG00000020073 #31	DESI1 (ENSPCOG00000026824) #32	XRCC6 (ENSPCOG00000027338) #33	ENSPCOG00000025033	MEI1 (ENSPCOG00000015175)	CCDC134 (ENSPCOG00000025774)	SREBF2 (ENSPCOG00000023461)
Greater bamboo lemur	MODERN SPECIES	231	CACNA1I (ENSPSMG00000003753)	ENTHD1 (ENSPSMG00000003712)	GRAP2 (ENSPSMG00000003705)	FAM83F (ENSPSMG00000003697)	TNRC6B (ENSPSMG00000003634)	ADSL (ENSPSMG00000003312) #11	SGSM3 (ENSPSMG00000002912) #12	MRTFA (ENSPSMG00000002488) #13	MCHR1 (ENSPSMG00000002312) #14	SLC25A17 (ENSPSMG00000002228) #15	ST13 (ENSPSMG00000002173) #16	DNAJB7 (ENSPSMG00000002153)	XPNPEP3 (ENSPSMG00000002127) #18	RBX1 (ENSPSMG00000002112) #19	EP300 (ENSPSMG00000001992) #20	L3MBTL2 (ENSPSMG00000001837) #22	CHADL (ENSPSMG00000001766) #23	RANGAP1 (ENSPSMG00000001639) #24	ZC3H7B (ENSPSMG00000001526) #25	TEF (ENSPSMG00000001506) #26	TOB2 (ENSPSMG00000001464)	PHF5A (ENSPSMG00000001452) #27	ACO2 (ENSPSMG00000001419) #28	POLR3H (ENSPSMG00000001287) #29	CSDC2 (ENSPSMG00000001223) #30	PMM1 (ENSPSMG00000001200) #31	DESI1 (ENSPSMG00000001171) #32	XRCC6 (ENSPSMG00000000818) #33	SNU13 (ENSPSMG00000000630)	MEI1 (ENSPSMG00000000596)	CCDC134 (ENSPSMG00000000532)
Mouse lemur	MODERN SPECIES	29	CACNA1I (ENSMICG00000002043)	ENTHD1 (ENSMICG00000039602)	GRAP2 (ENSMICG00000016121)	FAM83F (ENSMICG00000016129)	TNRC6B (ENSMICG00000014056)	ADSL (ENSMICG00000014085) #11	SGSM3 (ENSMICG00000005645) #12	MRTFA (ENSMICG00000005671) #13	MCHR1 (ENSMICG00000008864) #14	SLC25A17 (ENSMICG00000008868) #15	ENSMICG00000042936 #16	XPNPEP3 (ENSMICG00000008881) #18	ENSMICG00000041690	RBX1 (ENSMICG00000034593) #19	EP300 (ENSMICG00000013864) #20	L3MBTL2 (ENSMICG00000002619) #22	CHADL (ENSMICG00000037353) #23	RANGAP1 (ENSMICG00000013450) #24	ZC3H7B (ENSMICG00000013471) #25	ENSMICG00000045077 #26	TOB2 (ENSMICG00000044468)	PHF5A (ENSMICG00000013520) #27	ACO2 (ENSMICG00000013529) #28	POLR3H (ENSMICG00000013546) #29	CSDC2 (ENSMICG00000041795) #30	PMM1 (ENSMICG00000005983) #31	DESI1 (ENSMICG00000045578) #32	XRCC6 (ENSMICG00000005993) #33	ENSMICG00000007014	SNU13 (ENSMICG00000013557)	ENSMICG00000045689
Bushbaby	MODERN SPECIES	122	CACNA1I (ENSOGAG00000002655)	ENTHD1 (ENSOGAG00000002664)	GRAP2 (ENSOGAG00000002666)	FAM83F (ENSOGAG00000030522)	TNRC6B (ENSOGAG00000011096)	ADSL (ENSOGAG00000015435) #11	SGSM3 (ENSOGAG00000000967) #12	MRTFA (ENSOGAG00000003217) #13	MCHR1 (ENSOGAG00000016927) #14	SLC25A17 (ENSOGAG00000016929) #15	ENSOGAG00000016932 #16	DNAJB7 (ENSOGAG00000016936)	XPNPEP3 (ENSOGAG00000030566) #18	RBX1 (ENSOGAG00000016937) #19	EP300 (ENSOGAG00000000423) #20	L3MBTL2 (ENSOGAG00000000428) #22	CHADL (ENSOGAG00000028902) #23	RANGAP1 (ENSOGAG00000008823) #24	ZC3H7B (ENSOGAG00000008827) #25	TEF (ENSOGAG00000025997) #26	TOB2 (ENSOGAG00000008831)	ENSOGAG00000002839 #27	ACO2 (ENSOGAG00000002845) #28	ENSOGAG00000002850 #29	CSDC2 (ENSOGAG00000002852) #30	PMM1 (ENSOGAG00000027466) #31	DESI1 (ENSOGAG00000002854) #32	XRCC6 (ENSOGAG00000008821) #33	SNU13 (ENSOGAG00000004007)	ENSOGAG00000026014	MEI1 (ENSOGAG00000011980)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00550000074840.y.b.a.a
Tree shrew	MODERN SPECIES	5962																L3MBTL2 (ENSTBEG00000015918) #22	RANGAP1 (ENSTBEG00000016700) #24
Glires	ANCESTRAL SPECIES	4	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.a.h	ENSGT00900000141218	ENSGT00390000002077
Prairie vole	MODERN SPECIES	2	Gpr20 (ENSMOCG00000003252)	Ptp4a3 (ENSMOCG00000018999)	ENSMOCG00000008614	Gm6569 (ENSMOCG00000012239)	Adgrb1 (ENSMOCG00000016067)	Mroh4 (ENSMOCG00000000343)	Arc (ENSMOCG00000014212)	Jrk (ENSMOCG00000011136)	Psca (ENSMOCG00000022772)	Them6 (ENSMOCG00000022648)	Slurp1 (ENSMOCG00000019456)	Lypd2 (ENSMOCG00000018807)	Slurp2 (ENSMOCG00000005277)	Ly6d (ENSMOCG00000015686)	Ly6g6g (ENSMOCG00000013524)	L3mbtl2 (ENSMOCG00000019285) #22	Chadl (ENSMOCG00000011810) #23	Rangap1 (ENSMOCG00000015758) #24	Zc3h7b (ENSMOCG00000014855) #25	Tef (ENSMOCG00000001800) #26	Tob2 (ENSMOCG00000021112)	Phf5a (ENSMOCG00000015149) #27	Aco2 (ENSMOCG00000008387) #28	Polr3h (ENSMOCG00000018747) #29	Csdc2 (ENSMOCG00000017299) #30	Pmm1 (ENSMOCG00000012876) #31	Desi1 (ENSMOCG00000010048) #32	Xrcc6 (ENSMOCG00000015717) #33	4930407I10Rik (ENSMOCG00000013993)	Mei1 (ENSMOCG00000009514)	Ccdc134 (ENSMOCG00000005926)
Northern American deer mouse	MODERN SPECIES	12	Enthd1 (ENSPEMG00000008002)	Grap2 (ENSPEMG00000009128)	Fam83f (ENSPEMG00000010602)	Tnrc6b (ENSPEMG00000011403)	Adsl (ENSPEMG00000017163) #11	Sgsm3 (ENSPEMG00000011819) #12	Mrtfa (ENSPEMG00000003602) #13	Mchr1 (ENSPEMG00000027041) #14	Slc25a17 (ENSPEMG00000015903) #15	St13 (ENSPEMG00000010026) #16	Xpnpep3 (ENSPEMG00000008673) #18	Dnajb7 (ENSPEMG00000027247)	Rbx1 (ENSPEMG00000015808) #19	ENSPEMG00000029631	Ep300 (ENSPEMG00000011981) #20	L3mbtl2 (ENSPEMG00000011652) #22	Chadl (ENSPEMG00000015210) #23	Rangap1 (ENSPEMG00000013930) #24	Zc3h7b (ENSPEMG00000023990) #25	Tef (ENSPEMG00000029238) #26	Tob2 (ENSPEMG00000028595)	ENSPEMG00000027549 #27	Aco2 (ENSPEMG00000021158) #28	ENSPEMG00000000726 #29	Csdc2 (ENSPEMG00000026460) #30	Pmm1 (ENSPEMG00000015085) #31	ENSPEMG00000024816	ENSPEMG00000027260	ENSPEMG00000028310	Ndufb11b (ENSPEMG00000027521)	Desi1 (ENSPEMG00000024515) #32
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00940000153331.y.b.a.b	ENSGT00390000003022.t	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Cacna1i (ENSCGRG00001022652)	Enthd1 (ENSCGRG00001021361)	Grap2 (ENSCGRG00001021712)	Fam83f (ENSCGRG00001018899)	Tnrc6b (ENSCGRG00001020166)	Adsl (ENSCGRG00001017906) #11	Sgsm3 (ENSCGRG00001018846) #12	Mrtfa (ENSCGRG00001018160) #13	Mchr1 (ENSCGRG00001017287) #14	Slc25a17 (ENSCGRG00001017555) #15	ENSCGRG00001019004 #16	Xpnpep3 (ENSCGRG00001020209) #18	Dnajb7 (ENSCGRG00001010409)	Rbx1 (ENSCGRG00001022113) #19	Ep300 (ENSCGRG00001020720) #20	L3mbtl2 (ENSCGRG00001021097) #22	Chadl (ENSCGRG00001017198) #23	Rangap1 (ENSCGRG00001017379) #24	Zc3h7b (ENSCGRG00001022924) #25	Tef (ENSCGRG00001005588) #26	Tob2 (ENSCGRG00001010039)	Phf5a (ENSCGRG00001017936) #27	ENSCGRG00001023335 #28	Polr3h (ENSCGRG00001023556) #29	Csdc2 (ENSCGRG00001021123) #30	Pmm1 (ENSCGRG00001021685) #31	ENSCGRG00001018874	Ndufb11b (ENSCGRG00001009944)	Desi1 (ENSCGRG00001018751) #32	Xrcc6 (ENSCGRG00001019029) #33	ENSCGRG00001019169
Golden Hamster	MODERN SPECIES	626	Enthd1 (ENSMAUG00000006247)	Grap2 (ENSMAUG00000008300)	Fam83f (ENSMAUG00000015744)	ENSMAUG00000014912	Tnrc6b (ENSMAUG00000016123)	Adsl (ENSMAUG00000001074) #11	Sgsm3 (ENSMAUG00000008597) #12	ENSMAUG00000022256 #13	ENSMAUG00000012578 #13	Mchr1 (ENSMAUG00000021927) #14	Slc25a17 (ENSMAUG00000017231) #15	ENSMAUG00000004356	Dnajb7 (ENSMAUG00000010726)	ENSMAUG00000010852 #19	Ep300 (ENSMAUG00000004380) #20	L3mbtl2 (ENSMAUG00000008519) #22	Rangap1 (ENSMAUG00000013685) #24	Zc3h7b (ENSMAUG00000007915) #25	Tef (ENSMAUG00000011211) #26	Tob2 (ENSMAUG00000007650)	Phf5a (ENSMAUG00000017124) #27	Aco2 (ENSMAUG00000007598) #28	Polr3h (ENSMAUG00000022215) #29	Csdc2 (ENSMAUG00000020821) #30	ENSMAUG00000012267	Desi1 (ENSMAUG00000020204) #32	Xrcc6 (ENSMAUG00000017340) #33	Snu13 (ENSMAUG00000010871)	4930407I10Rik (ENSMAUG00000020761)	ENSMAUG00000018190	Ccdc134 (ENSMAUG00000015349)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00390000003022.t	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218
Mus	ANCESTRAL SPECIES	11	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00390000003022.t	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00390000003022.t	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00390000003022.t	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Steppe mouse	MODERN SPECIES	3124	Cacna1i (ENSMSIG00000028818)	Enthd1 (ENSMSIG00000028810)	Grap2 (ENSMSIG00000028802)	Fam83f (ENSMSIG00000028799)	Tnrc6b (ENSMSIG00000028673)	Adsl (ENSMSIG00000028638) #11	Sgsm3 (ENSMSIG00000028619) #12	Mrtfa (ENSMSIG00000028601) #13	Mchr1 (ENSMSIG00000028591) #14	Slc25a17 (ENSMSIG00000028556) #15	St13 (ENSMSIG00000028532) #16	Dnajb7 (ENSMSIG00000028531)	Xpnpep3 (ENSMSIG00000028518) #18	Rbx1 (ENSMSIG00000028515) #19	ENSMSIG00000027732 #20	L3mbtl2 (ENSMSIG00000027660) #22	Chadl (ENSMSIG00000027651) #23	Rangap1 (ENSMSIG00000027600) #24
spretus	MODERN SPECIES	6	Enthd1 (MGP_SPRETEiJ_G0020938)	Grap2 (MGP_SPRETEiJ_G0020939)	Fam83f (MGP_SPRETEiJ_G0020940)	Tnrc6b (MGP_SPRETEiJ_G0020941)	Adsl (MGP_SPRETEiJ_G0020942) #11	MGP_SPRETEiJ_G0020943 #12	MGP_SPRETEiJ_G0020944 #12	Mrtfa (MGP_SPRETEiJ_G0020945) #13	Mchr1 (MGP_SPRETEiJ_G0020946) #14	Slc25a17 (MGP_SPRETEiJ_G0020947) #15	St13 (MGP_SPRETEiJ_G0020948) #16	Xpnpep3 (MGP_SPRETEiJ_G0020949) #18	Dnajb7 (MGP_SPRETEiJ_G0020950)	Rbx1 (MGP_SPRETEiJ_G0020951) #19	Ep300 (MGP_SPRETEiJ_G0020952) #20	L3mbtl2 (MGP_SPRETEiJ_G0020953) #22	Chadl (MGP_SPRETEiJ_G0020954) #23	Rangap1 (MGP_SPRETEiJ_G0020955) #24	Zc3h7b (MGP_SPRETEiJ_G0020956) #25	Tef (MGP_SPRETEiJ_G0020957) #26	MGP_SPRETEiJ_G0020958	MGP_SPRETEiJ_G0020959	MGP_SPRETEiJ_G0020960	Tob2 (MGP_SPRETEiJ_G0020961)	Phf5a (MGP_SPRETEiJ_G0020962) #27	Aco2 (MGP_SPRETEiJ_G0020963) #28	Polr3h (MGP_SPRETEiJ_G0020964) #29	Csdc2 (MGP_SPRETEiJ_G0020965) #30	Pmm1 (MGP_SPRETEiJ_G0020966) #31	Xrcc6 (MGP_SPRETEiJ_G0020967) #33	Desi1 (MGP_SPRETEiJ_G0020968) #32
Mouse	MODERN SPECIES	6	Cacna1i (ENSMUSG00000022416)	Enthd1 (ENSMUSG00000050439)	Grap2 (ENSMUSG00000042351)	Fam83f (ENSMUSG00000022408)	Tnrc6b (ENSMUSG00000047888)	Adsl (ENSMUSG00000022407) #11	Sgsm3 (ENSMUSG00000042303) #12	Mrtfa (ENSMUSG00000042292) #13	Mchr1 (ENSMUSG00000050164) #14	Slc25a17 (ENSMUSG00000022404) #15	St13 (ENSMUSG00000022403) #16	Xpnpep3 (ENSMUSG00000022401) #18	Dnajb7 (ENSMUSG00000047108)	Rbx1 (ENSMUSG00000022400) #19	Ep300 (ENSMUSG00000055024) #20	L3mbtl2 (ENSMUSG00000022394) #22	Chadl (ENSMUSG00000063765) #23	Rangap1 (ENSMUSG00000022391) #24	Zc3h7b (ENSMUSG00000022390) #25	Tef (ENSMUSG00000022389) #26	Tob2 (ENSMUSG00000048546)	Phf5a (ENSMUSG00000061360) #27	Aco2 (ENSMUSG00000022477) #28	Polr3h (ENSMUSG00000022476) #29	Csdc2 (ENSMUSG00000042109) #30	Pmm1 (ENSMUSG00000022474) #31	Ndufb11b (ENSMUSG00000061633)	Xrcc6 (ENSMUSG00000022471) #33	Desi1 (ENSMUSG00000022472) #32	Snu13 (ENSMUSG00000063480)	4930407I10Rik (ENSMUSG00000075524)
Ryukyu mouse	MODERN SPECIES	6	Enthd1 (MGP_CAROLIEiJ_G0020040)	Grap2 (MGP_CAROLIEiJ_G0020041)	Fam83f (MGP_CAROLIEiJ_G0020042)	Tnrc6b (MGP_CAROLIEiJ_G0020043)	Adsl (MGP_CAROLIEiJ_G0020044) #11	MGP_CAROLIEiJ_G0020045 #12	MGP_CAROLIEiJ_G0020046 #12	Mrtfa (MGP_CAROLIEiJ_G0020047) #13	Mchr1 (MGP_CAROLIEiJ_G0020048) #14	Slc25a17 (MGP_CAROLIEiJ_G0020049) #15	St13 (MGP_CAROLIEiJ_G0020050) #16	MGP_CAROLIEiJ_G0020051 #18	Dnajb7 (MGP_CAROLIEiJ_G0020052)	Rbx1 (MGP_CAROLIEiJ_G0020053) #19	Ep300 (MGP_CAROLIEiJ_G0020054) #20	L3mbtl2 (MGP_CAROLIEiJ_G0020055) #22	Chadl (MGP_CAROLIEiJ_G0020056) #23	Rangap1 (MGP_CAROLIEiJ_G0020057) #24	Zc3h7b (MGP_CAROLIEiJ_G0020058) #25	Tef (MGP_CAROLIEiJ_G0020059) #26	Tob2 (MGP_CAROLIEiJ_G0020060)	Phf5a (MGP_CAROLIEiJ_G0020061) #27	Aco2 (MGP_CAROLIEiJ_G0020062) #28	Polr3h (MGP_CAROLIEiJ_G0020063) #29	Csdc2 (MGP_CAROLIEiJ_G0020064) #30	Pmm1 (MGP_CAROLIEiJ_G0020065) #31	Ndufb11b (MGP_CAROLIEiJ_G0020066)	Xrcc6 (MGP_CAROLIEiJ_G0020067) #33	Desi1 (MGP_CAROLIEiJ_G0020068) #32	Snu13 (MGP_CAROLIEiJ_G0020069)	4930407I10Rik (MGP_CAROLIEiJ_G0020070)
Shrew mouse	MODERN SPECIES	8	Enthd1 (MGP_PahariEiJ_G0020042)	Grap2 (MGP_PahariEiJ_G0020043)	Fam83f (MGP_PahariEiJ_G0020044)	Tnrc6b (MGP_PahariEiJ_G0020045)	Adsl (MGP_PahariEiJ_G0020046) #11	MGP_PahariEiJ_G0020047 #12	MGP_PahariEiJ_G0020048 #12	Mrtfa (MGP_PahariEiJ_G0020049) #13	Mchr1 (MGP_PahariEiJ_G0020050) #14	Slc25a17 (MGP_PahariEiJ_G0020051) #15	St13 (MGP_PahariEiJ_G0020052) #16	MGP_PahariEiJ_G0020053 #18	Dnajb7 (MGP_PahariEiJ_G0020054)	Rbx1 (MGP_PahariEiJ_G0020055) #19	Ep300 (MGP_PahariEiJ_G0020056) #20	L3mbtl2 (MGP_PahariEiJ_G0020057) #22	Chadl (MGP_PahariEiJ_G0020058) #23	Rangap1 (MGP_PahariEiJ_G0020059) #24	Zc3h7b (MGP_PahariEiJ_G0020060) #25	Tef (MGP_PahariEiJ_G0020061) #26	Tob2 (MGP_PahariEiJ_G0020062)	Phf5a (MGP_PahariEiJ_G0020063) #27	Aco2 (MGP_PahariEiJ_G0020064) #28	Polr3h (MGP_PahariEiJ_G0020065) #29	Csdc2 (MGP_PahariEiJ_G0020066) #30	Pmm1 (MGP_PahariEiJ_G0020067) #31	Ndufb11b (MGP_PahariEiJ_G0020068)	Xrcc6 (MGP_PahariEiJ_G0020069) #33	Desi1 (MGP_PahariEiJ_G0020070) #32	MGP_PahariEiJ_G0020071	4930407I10Rik (MGP_PahariEiJ_G0020072)
Rat	MODERN SPECIES	17	Fam83f (ENSRNOG00000018330)	Tnrc6b (ENSRNOG00000024907)	Rpl26-ps1 (ENSRNOG00000032777)	Adsl (ENSRNOG00000018655) #11	Srek1ip1-ps1 (ENSRNOG00000066565)	Sgsm3 (ENSRNOG00000018745) #12	Mrtfa (ENSRNOG00000018803) #13	Mchr1 (ENSRNOG00000018895) #14	Slc25a17 (ENSRNOG00000018920) #15	Xpnpep3 (ENSRNOG00000019196) #18	Dnajb7 (ENSRNOG00000019187)	Rbx1 (ENSRNOG00000058914)	ENSRNOG00000070978	Ep300 (ENSRNOG00000000190) #20	Ep300 (ENSRNOG00000065659) #20	L3mbtl2 (ENSRNOG00000024743) #22	Chadl (ENSRNOG00000024631) #23	Rangap1 (ENSRNOG00000031789) #24	Zc3h7b (ENSRNOG00000055925) #25	Tef (ENSRNOG00000019383) #26	Tob2 (ENSRNOG00000050500)	Phf5a (ENSRNOG00000024170) #27	Aco2 (ENSRNOG00000024128) #28	Polr3h (ENSRNOG00000004471) #29	Csdc2 (ENSRNOG00000005332) #30	Pmm1 (ENSRNOG00000005358) #31	RGD1306782 (ENSRNOG00000005572)	Desi1 (ENSRNOG00000005577) #32	Xrcc6 (ENSRNOG00000006392) #33	Snu13 (ENSRNOG00000006762)	LOC100362109 (ENSRNOG00000030150)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1277									Mchr1 (ENSNGAG00000019906) #14	Slc25a17 (ENSNGAG00000013608) #15	ENSNGAG00000016572 #16	Xpnpep3 (ENSNGAG00000005811) #18	ENSNGAG00000017697	Rbx1 (ENSNGAG00000016899) #19	Ep300 (ENSNGAG00000000598) #20	L3mbtl2 (ENSNGAG00000019279) #22	Chadl (ENSNGAG00000009432) #23	Rangap1 (ENSNGAG00000014916) #24	Zc3h7b (ENSNGAG00000013813) #25	Tef (ENSNGAG00000011439) #26	Tob2 (ENSNGAG00000008266)	Phf5a (ENSNGAG00000001430) #27	ENSNGAG00000015866 #28	Polr3h (ENSNGAG00000015009) #29	Csdc2 (ENSNGAG00000011207) #30	Pmm1 (ENSNGAG00000019009) #31	Desi1 (ENSNGAG00000015435) #32	Xrcc6 (ENSNGAG00000013750) #33	Snu13 (ENSNGAG00000012960)	ENSNGAG00000020669	Mei1 (ENSNGAG00000020170)
Lesser Egyptian jerboa	MODERN SPECIES	42	Cacna1i (ENSJJAG00000018253)	Grap2 (ENSJJAG00000014224)	Fam83f (ENSJJAG00000011999)	Tnrc6b (ENSJJAG00000015779)	Adsl (ENSJJAG00000016383) #11	Sgsm3 (ENSJJAG00000014792) #12	ENSJJAG00000015055 #13	ENSJJAG00000019590 #13	Mchr1 (ENSJJAG00000011702) #14	Slc25a17 (ENSJJAG00000011965) #15	ENSJJAG00000019427	ENSJJAG00000011081	Xpnpep3 (ENSJJAG00000016807) #18	Rbx1 (ENSJJAG00000021228) #19	Ep300 (ENSJJAG00000020124) #20	L3mbtl2 (ENSJJAG00000016073) #22	Chadl (ENSJJAG00000016665) #23	Rangap1 (ENSJJAG00000014253) #24	Zc3h7b (ENSJJAG00000013804) #25	Tef (ENSJJAG00000010078) #26	Tob2 (ENSJJAG00000005169)	Phf5a (ENSJJAG00000011261) #27	Aco2 (ENSJJAG00000014029) #28	Polr3h (ENSJJAG00000017986) #29	Csdc2 (ENSJJAG00000019289) #30	ENSJJAG00000018569 #31	Desi1 (ENSJJAG00000019532) #32	Xrcc6 (ENSJJAG00000017136) #33	Snu13 (ENSJJAG00000014378)	Mei1 (ENSJJAG00000016715)	ENSJJAG00000014856
Kangaroo rat	MODERN SPECIES	398	Rps19bp1 (ENSDORG00000026673)	Cacna1i (ENSDORG00000005080)	Enthd1 (ENSDORG00000025046)	Grap2 (ENSDORG00000015414)	Fam83f (ENSDORG00000013192)	Tnrc6b (ENSDORG00000003386)	Adsl (ENSDORG00000003388) #11	Sgsm3 (ENSDORG00000000722) #12	Mrtfa (ENSDORG00000000727) #13	Mchr1 (ENSDORG00000023475) #14	Slc25a17 (ENSDORG00000024929) #15	ENSDORG00000012775 #16	Xpnpep3 (ENSDORG00000012776) #18	Rbx1 (ENSDORG00000014908) #19	Ep300 (ENSDORG00000010258) #20	L3mbtl2 (ENSDORG00000008914) #22	Chadl (ENSDORG00000027890) #23	Rangap1 (ENSDORG00000004657) #24	Zc3h7b (ENSDORG00000013794) #25	Tef (ENSDORG00000014982) #26	Tob2 (ENSDORG00000002204)	Phf5a (ENSDORG00000002205) #27	Aco2 (ENSDORG00000002209) #28	Polr3h (ENSDORG00000002215) #29	Csdc2 (ENSDORG00000024736) #30	Pmm1 (ENSDORG00000011755) #31	Desi1 (ENSDORG00000011407) #32	Xrcc6 (ENSDORG00000009101) #33	Snu13 (ENSDORG00000027409)	ENSDORG00000029855	Ccdc134 (ENSDORG00000000689)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C.c.a #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C.c.a #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00900000141218	ENSGT00390000002077
Arctic ground squirrel	MODERN SPECIES	328	CACNA1I (ENSUPAG00010006656)	ENTHD1 (ENSUPAG00010006643)	GRAP2 (ENSUPAG00010006631)	FAM83F (ENSUPAG00010006625)	TNRC6B (ENSUPAG00010006574)	ENSUPAG00010006489 #11	SGSM3 (ENSUPAG00010006439) #12	MRTFA (ENSUPAG00010006297) #13	MCHR1 (ENSUPAG00010006286) #14	SLC25A17 (ENSUPAG00010006258) #15	ST13 (ENSUPAG00010006238) #16	DNAJB7 (ENSUPAG00010006227)	XPNPEP3 (ENSUPAG00010006211) #18	RBX1 (ENSUPAG00010006183) #19	EP300 (ENSUPAG00010006142) #20	L3MBTL2 (ENSUPAG00010006102) #22	CHADL (ENSUPAG00010006094) #23	RANGAP1 (ENSUPAG00010006037) #24	ZC3H7B (ENSUPAG00010006013) #25	TEF (ENSUPAG00010005998) #26	TOB2 (ENSUPAG00010005994)	PHF5A (ENSUPAG00010005980) #27	ACO2 (ENSUPAG00010005914) #28	POLR3H (ENSUPAG00010005893) #29	CSDC2 (ENSUPAG00010005885) #30	PMM1 (ENSUPAG00010005870) #31	DESI1 (ENSUPAG00010005863) #32	XRCC6 (ENSUPAG00010005843) #33	SNU13 (ENSUPAG00010005841)	ENSUPAG00010005838	MEI1 (ENSUPAG00010005795)
Squirrel	MODERN SPECIES	92	RPS19BP1 (ENSSTOG00000008459)	CACNA1I (ENSSTOG00000025056)	ENTHD1 (ENSSTOG00000002219)	GRAP2 (ENSSTOG00000002229)	FAM83F (ENSSTOG00000023057)	TNRC6B (ENSSTOG00000008927)	ENSSTOG00000000979 #11	SGSM3 (ENSSTOG00000002927) #12	MRTFA (ENSSTOG00000002947) #13	MCHR1 (ENSSTOG00000010032) #14	SLC25A17 (ENSSTOG00000004370) #15	ENSSTOG00000003165 #16	XPNPEP3 (ENSSTOG00000003200) #18	ENSSTOG00000015580 #19	EP300 (ENSSTOG00000000722) #20	L3MBTL2 (ENSSTOG00000000242) #22	CHADL (ENSSTOG00000026534) #23	RANGAP1 (ENSSTOG00000016191) #24	ZC3H7B (ENSSTOG00000016196) #25	TEF (ENSSTOG00000019642) #26	ENSSTOG00000016206	PHF5A (ENSSTOG00000016207) #27	ACO2 (ENSSTOG00000016210) #28	POLR3H (ENSSTOG00000016215) #29	CSDC2 (ENSSTOG00000020429) #30	PMM1 (ENSSTOG00000026025) #31	DESI1 (ENSSTOG00000009480) #32	XRCC6 (ENSSTOG00000009490) #33	SNU13 (ENSSTOG00000009514)	MEI1 (ENSSTOG00000012870)	CCDC134 (ENSSTOG00000012907)
Alpin marmot	MODERN SPECIES	76	TNRC6B (ENSMMMG00000004583)	ENSMMMG00000004472 #11	SGSM3 (ENSMMMG00000004431) #12	MRTFA (ENSMMMG00000004294) #13	MCHR1 (ENSMMMG00000004286) #14	ENSMMMG00000004275	ENSMMMG00000004266	ENSMMMG00000004251	SLC25A17 (ENSMMMG00000004230) #15	ENSMMMG00000004215	ST13 (ENSMMMG00000004184) #16	DNAJB7 (ENSMMMG00000004165)	XPNPEP3 (ENSMMMG00000004122) #18	RBX1 (ENSMMMG00000004102) #19	EP300 (ENSMMMG00000004029) #20	L3MBTL2 (ENSMMMG00000003930) #22	RANGAP1 (ENSMMMG00000003853) #24	ZC3H7B (ENSMMMG00000003824) #25	TEF (ENSMMMG00000003810) #26	TOB2 (ENSMMMG00000003805)	PHF5A (ENSMMMG00000003799) #27	ACO2 (ENSMMMG00000003764) #28	POLR3H (ENSMMMG00000003743) #29	CSDC2 (ENSMMMG00000003735) #30	PMM1 (ENSMMMG00000003696) #31	DESI1 (ENSMMMG00000003682) #32	ENSMMMG00000003671 #33	SNU13 (ENSMMMG00000003647)	ENSMMMG00000003627	MEI1 (ENSMMMG00000003545)	CCDC134 (ENSMMMG00000003517)
Eurasian red squirrel	MODERN SPECIES	14	ENTHD1 (ENSSVLG00005017597)	GRAP2 (ENSSVLG00005017680)	FAM83F (ENSSVLG00005017783)	TNRC6B (ENSSVLG00005017928)	ENSSVLG00005018698 #11	SGSM3 (ENSSVLG00005018784) #12	MRTFA (ENSSVLG00005018986) #13	ENSSVLG00005019466	MCHR1 (ENSSVLG00005019589) #14	SLC25A17 (ENSSVLG00005019724) #15	XPNPEP3 (ENSSVLG00005020124) #18	DNAJB7 (ENSSVLG00005020233)	RBX1 (ENSSVLG00005020266) #19	ENSSVLG00005020321	EP300 (ENSSVLG00005020397) #20	L3MBTL2 (ENSSVLG00005020580) #22	CHADL (ENSSVLG00005020628) #23	ENSSVLG00005020695 #24	ENSSVLG00005020791 #24	ZC3H7B (ENSSVLG00005020817) #25	TEF (ENSSVLG00005020887) #26	TOB2 (ENSSVLG00005020946)	PHF5A (ENSSVLG00005020965) #27	ACO2 (ENSSVLG00005021008) #28	POLR3H (ENSSVLG00005021062) #29	CSDC2 (ENSSVLG00005021115) #30	PMM1 (ENSSVLG00005021168) #31	DESI1 (ENSSVLG00005021220) #32	XRCC6 (ENSSVLG00005021287) #33	ENSSVLG00005021427	MEI1 (ENSSVLG00005021530)
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.a.a	ENSGT00550000074840.y.b.b	ENSGT00390000002077
Guinea pig	MODERN SPECIES	28	RPS19BP1 (ENSCPOG00000037075)	CACNA1I (ENSCPOG00000011963)	ENTHD1 (ENSCPOG00000014129)	GRAP2 (ENSCPOG00000040713)	FAM83F (ENSCPOG00000014133)	TNRC6B (ENSCPOG00000005705)	ADSL (ENSCPOG00000005715) #11	SGSM3 (ENSCPOG00000009876) #12	MRTFA (ENSCPOG00000009883) #13	MCHR1 (ENSCPOG00000012166) #14	SLC25A17 (ENSCPOG00000002289) #15	ENSCPOG00000002290 #16	XPNPEP3 (ENSCPOG00000002291) #18	RBX1 (ENSCPOG00000035978) #19	EP300 (ENSCPOG00000005438) #20	L3MBTL2 (ENSCPOG00000021063) #22	CHADL (ENSCPOG00000026967) #23	RANGAP1 (ENSCPOG00000004404) #24	ZC3H7B (ENSCPOG00000004413) #25	TEF (ENSCPOG00000020591) #26	TOB2 (ENSCPOG00000031873)	PHF5A (ENSCPOG00000033309) #27	ACO2 (ENSCPOG00000012642) #28	POLR3H (ENSCPOG00000012650) #29	CSDC2 (ENSCPOG00000037976) #30	PMM1 (ENSCPOG00000014618) #31	DESI1 (ENSCPOG00000038083) #32	XRCC6 (ENSCPOG00000003542) #33	SNU13 (ENSCPOG00000040165)	ENSCPOG00000010113	CCDC134 (ENSCPOG00000000617)
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.a.a	ENSGT00390000002077	ENSGT00390000020164
Long-tailed chinchilla	MODERN SPECIES	120	CACNA1I (ENSCLAG00000016706)	ENTHD1 (ENSCLAG00000016698)	GRAP2 (ENSCLAG00000016753)	FAM83F (ENSCLAG00000016721)	TNRC6B (ENSCLAG00000016942)	ADSL (ENSCLAG00000016908) #11	SGSM3 (ENSCLAG00000016510) #12	MRTFA (ENSCLAG00000016828) #13	MCHR1 (ENSCLAG00000016672) #14	SLC25A17 (ENSCLAG00000016789) #15	ST13 (ENSCLAG00000016711) #16	XPNPEP3 (ENSCLAG00000016993) #18	DNAJB7 (ENSCLAG00000016674)	ENSCLAG00000016739 #19	EP300 (ENSCLAG00000016995) #20	L3MBTL2 (ENSCLAG00000017319) #22	CHADL (ENSCLAG00000016821) #23	RANGAP1 (ENSCLAG00000017330) #24	ZC3H7B (ENSCLAG00000015052) #25	TEF (ENSCLAG00000016418) #26	TOB2 (ENSCLAG00000016670)	ENSCLAG00000016714 #27	ACO2 (ENSCLAG00000016998) #28	POLR3H (ENSCLAG00000016948) #29	CSDC2 (ENSCLAG00000016705) #30	PMM1 (ENSCLAG00000016748) #31	DESI1 (ENSCLAG00000016871) #32	XRCC6 (ENSCLAG00000016669) #33	SNU13 (ENSCLAG00000017182)	ENSCLAG00000016769	ENSCLAG00000017166
Degu	MODERN SPECIES	197	MROH7 (ENSODEG00000011770)	FAM151A (ENSODEG00000011460)	ACOT11 (ENSODEG00000011967)	ENSODEG00000020148	SSBP3 (ENSODEG00000011890)	MRPL37 (ENSODEG00000013096)	CYB5RL (ENSODEG00000013330)	CDCP2 (ENSODEG00000012753)	TCEANC2 (ENSODEG00000013526)	ENSODEG00000013663	LDLRAD1 (ENSODEG00000011774)	LRRC42 (ENSODEG00000012283)	IFT25 (ENSODEG00000013069)	DIO1 (ENSODEG00000012387)	ENSODEG00000019895	L3MBTL2 (ENSODEG00000013665) #22	CHADL (ENSODEG00000012116) #23	RANGAP1 (ENSODEG00000014583) #24	ZC3H7B (ENSODEG00000012411) #25	TEF (ENSODEG00000014126) #26	TOB2 (ENSODEG00000020030)	ENSODEG00000013125 #27	ACO2 (ENSODEG00000012550) #28	ENSODEG00000013641 #29	CSDC2 (ENSODEG00000015733) #30	PMM1 (ENSODEG00000012155) #31	DESI1 (ENSODEG00000012652) #32	XRCC6 (ENSODEG00000015847) #33	SNU13 (ENSODEG00000015632)	ENSODEG00000012993	CCDC134 (ENSODEG00000013183)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000017812	ENSHGLG00000049183	ENSHGLG00000018482	ENSHGLG00000042810	ENSHGLG00000038998	ENSHGLG00000009306	ADSL (ENSHGLG00000016466) #11	SGSM3 (ENSHGLG00000018585) #12	MRTFA (ENSHGLG00000009723) #13	MCHR1 (ENSHGLG00000005319) #14	SLC25A17 (ENSHGLG00000013720) #15	ENSHGLG00000013411 #16	XPNPEP3 (ENSHGLG00000013429) #18	RBX1 (ENSHGLG00000014822) #19	EP300 (ENSHGLG00000015586) #20	L3MBTL2 (ENSHGLG00000018290) #22	CHADL (ENSHGLG00000018119) #23	RANGAP1 (ENSHGLG00000015526) #24	ZC3H7B (ENSHGLG00000012263) #25	TEF (ENSHGLG00000050605) #26	TOB2 (ENSHGLG00000009302)	PHF5A (ENSHGLG00000042397) #27	ENSHGLG00000041589	Aco2 (ENSHGLG00000015463) #28	POLR3H (ENSHGLG00000014795) #29	CSDC2 (ENSHGLG00000016778) #30	PMM1 (ENSHGLG00000016980) #31	DESI1 (ENSHGLG00000039030) #32	ENSHGLG00000018078 #33	SNU13 (ENSHGLG00000018808)	MEI1 (ENSHGLG00000017177)
Lagomorpha	ANCESTRAL SPECIES	76	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b.b	ENSGT00390000002077	ENSGT00390000020164
Rabbit	MODERN SPECIES	467	ENSOCUG00000032853	GRAP2 (ENSOCUG00000012267)	FAM83F (ENSOCUG00000014060)	TNRC6B (ENSOCUG00000016128)	ADSL (ENSOCUG00000016161) #11	SGSM3 (ENSOCUG00000012665) #12	ENSOCUG00000036824 #13	ENSOCUG00000023730 #13	MCHR1 (ENSOCUG00000017616) #14	SLC25A17 (ENSOCUG00000009630) #15	ENSOCUG00000009636 #16	DNAJB7 (ENSOCUG00000009651)	XPNPEP3 (ENSOCUG00000009642) #18	ENSOCUG00000035746 #19	EP300 (ENSOCUG00000011434) #20	L3MBTL2 (ENSOCUG00000002689) #22	CHADL (ENSOCUG00000002701) #23	RANGAP1 (ENSOCUG00000002704) #24	ZC3H7B (ENSOCUG00000002712) #25	TEF (ENSOCUG00000012866) #26	TOB2 (ENSOCUG00000027909)	PHF5A (ENSOCUG00000012705) #27	ACO2 (ENSOCUG00000021368) #28	POLR3H (ENSOCUG00000007275) #29	CSDC2 (ENSOCUG00000006938) #30	PMM1 (ENSOCUG00000006941) #31	ENSOCUG00000011875 #32	XRCC6 (ENSOCUG00000006948) #33	SNU13 (ENSOCUG00000023785)	MEI1 (ENSOCUG00000013337)	CCDC134 (ENSOCUG00000013355)
Pika	MODERN SPECIES	5257															EP300 (ENSOPRG00000012268) #20	L3MBTL2 (ENSOPRG00000012304) #22	CHADL (ENSOPRG00000012324) #23	ENSOPRG00000012340 #24
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Suina	ANCESTRAL SPECIES	21	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00990000212282	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Chacoan peccary	MODERN SPECIES	871	GRAP2 (ENSCWAG00000014592)	FAM83F (ENSCWAG00000014521)	TNRC6B (ENSCWAG00000013879)	ADSL (ENSCWAG00000013708) #11	SGSM3 (ENSCWAG00000013567) #12	MRTFA (ENSCWAG00000013293) #13	MCHR1 (ENSCWAG00000013134) #14	SLC25A17 (ENSCWAG00000013072) #15	ST13 (ENSCWAG00000013022) #16	ENSCWAG00000012999	ENSCWAG00000012977	XPNPEP3 (ENSCWAG00000012851) #18	RBX1 (ENSCWAG00000012787) #19	ENSCWAG00000012771	EP300 (ENSCWAG00000012442) #20	L3MBTL2 (ENSCWAG00000012412) #22	CHADL (ENSCWAG00000012334) #23	RANGAP1 (ENSCWAG00000012282) #24	ZC3H7B (ENSCWAG00000012215) #25	TEF (ENSCWAG00000012151) #26	TOB2 (ENSCWAG00000012139)	PHF5A (ENSCWAG00000012101) #27	ACO2 (ENSCWAG00000012041) #28	POLR3H (ENSCWAG00000011965) #29	CSDC2 (ENSCWAG00000011932) #30	PMM1 (ENSCWAG00000011902) #31	DESI1 (ENSCWAG00000011787) #32	XRCC6 (ENSCWAG00000011601) #33	SNU13 (ENSCWAG00000011528)	MEI1 (ENSCWAG00000011137)	CCDC134 (ENSCWAG00000011088)
Pig	MODERN SPECIES	13	GRAP2 (ENSSSCG00000000080)	FAM83F (ENSSSCG00000000079)	TNRC6B (ENSSSCG00000000078)	ADSL (ENSSSCG00000000077) #11	ENSSSCG00000055170 #13	SGSM3 (ENSSSCG00000000076) #12	ENSSSCG00000000075 #13	MCHR1 (ENSSSCG00000000074) #14	ENSSSCG00000061921	SLC25A17 (ENSSSCG00000000072) #15	ST13 (ENSSSCG00000000071) #16	ENSSSCG00000034801	XPNPEP3 (ENSSSCG00000033823) #18	ENSSSCG00000034230 #19	EP300 (ENSSSCG00000000068) #20	L3MBTL2 (ENSSSCG00000000066) #22	CHADL (ENSSSCG00000000067) #23	RANGAP1 (ENSSSCG00000028202) #24	ZC3H7B (ENSSSCG00000033036) #25	TEF (ENSSSCG00000035152) #26	TOB2 (ENSSSCG00000037958)	PHF5A (ENSSSCG00000035082) #27	ACO2 (ENSSSCG00000000064) #28	POLR3H (ENSSSCG00000000063) #29	CSDC2 (ENSSSCG00000000062) #30	PMM1 (ENSSSCG00000000061) #31	DESI1 (ENSSSCG00000034265) #32	XRCC6 (ENSSSCG00000000059) #33	SNU13 (ENSSSCG00000000058)	ENSSSCG00000057322	MEI1 (ENSSSCG00000034405)
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Camelidae	ANCESTRAL SPECIES	28	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00390000002077	ENSGT00390000020164
Alpaca	MODERN SPECIES	3199																ENSVPAG00000001197 #22
Arabian camel	MODERN SPECIES	3	ENSCDRG00005014742	GRAP2 (ENSCDRG00005014772)	FAM83F (ENSCDRG00005014830)	TNRC6B (ENSCDRG00005014891)	ADSL (ENSCDRG00005015465) #11	SGSM3 (ENSCDRG00005016107) #12	MRTFA (ENSCDRG00005016155) #13	ENSCDRG00005016267	MCHR1 (ENSCDRG00005016289) #14	SLC25A17 (ENSCDRG00005016332) #15	ST13 (ENSCDRG00005016448) #16	XPNPEP3 (ENSCDRG00005016561) #18	DNAJB7 (ENSCDRG00005016641)	RBX1 (ENSCDRG00005016650) #19	EP300 (ENSCDRG00005016690) #20	L3MBTL2 (ENSCDRG00005016922) #22	CHADL (ENSCDRG00005017024) #23	RANGAP1 (ENSCDRG00005017066) #24	ZC3H7B (ENSCDRG00005017099) #25	TEF (ENSCDRG00005017170) #26	TOB2 (ENSCDRG00005017252)	PHF5A (ENSCDRG00005017267) #27	ACO2 (ENSCDRG00005017299) #28	POLR3H (ENSCDRG00005017372) #29	CSDC2 (ENSCDRG00005017436) #30	PMM1 (ENSCDRG00005017476) #31	DESI1 (ENSCDRG00005017505) #32	XRCC6 (ENSCDRG00005003310) #33	SNU13 (ENSCDRG00005003357)	MEI1 (ENSCDRG00005003416)	CCDC134 (ENSCDRG00005003531)
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Caprinae	ANCESTRAL SPECIES		ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Rambouillet Sheep	MODERN SPECIES	19	ENTHD1 (ENSOARG00020023243)	GRAP2 (ENSOARG00020023284)	FAM83F (ENSOARG00020023308)	TNRC6B (ENSOARG00020023375)	ADSL (ENSOARG00020023696) #11	ENSOARG00020023873 #12	ENSOARG00020023916 #12	MRTFA (ENSOARG00020023983) #13	MCHR1 (ENSOARG00020024030) #14	SLC25A17 (ENSOARG00020024071) #15	ST13 (ENSOARG00020024111) #16	XPNPEP3 (ENSOARG00020024132) #18	DNAJB7 (ENSOARG00020024159)	RBX1 (ENSOARG00020024169) #19	EP300 (ENSOARG00020024211) #20	L3MBTL2 (ENSOARG00020024288) #22	CHADL (ENSOARG00020024330) #23	RANGAP1 (ENSOARG00020024343) #24	ZC3H7B (ENSOARG00020024392) #25	TEF (ENSOARG00020024430) #26	TOB2 (ENSOARG00020024450)	PHF5A (ENSOARG00020024461) #27	ACO2 (ENSOARG00020024476) #28	POLR3H (ENSOARG00020024546) #29	CSDC2 (ENSOARG00020024566) #30	PMM1 (ENSOARG00020024579) #31	DESI1 (ENSOARG00020024591) #32	ENSOARG00020024613 #33	ENSOARG00020024631	ENSOARG00020024666	MEI1 (ENSOARG00020024711)
Goat	MODERN SPECIES	24	CACNA1I (ENSCHIG00000021978)	ENTHD1 (ENSCHIG00000019751)	GRAP2 (ENSCHIG00000015296)	FAM83F (ENSCHIG00000026060)	TNRC6B (ENSCHIG00000003491)	ENSCHIG00000016369 #11	SGSM3 (ENSCHIG00000018086) #12	MRTFA (ENSCHIG00000016119) #13	MCHR1 (ENSCHIG00000022709) #14	SLC25A17 (ENSCHIG00000026918) #15	ENSCHIG00000017681 #16	XPNPEP3 (ENSCHIG00000016070) #18	DNAJB7 (ENSCHIG00000012831)	ENSCHIG00000025708 #19	EP300 (ENSCHIG00000017767) #20	L3MBTL2 (ENSCHIG00000021479) #22	CHADL (ENSCHIG00000025971) #23	RANGAP1 (ENSCHIG00000026389) #24	ZC3H7B (ENSCHIG00000020469) #25	TEF (ENSCHIG00000016008) #26	TOB2 (ENSCHIG00000003528)	PHF5A (ENSCHIG00000015826) #27	ACO2 (ENSCHIG00000007877) #28	POLR3H (ENSCHIG00000013984) #29	CSDC2 (ENSCHIG00000021658) #30	PMM1 (ENSCHIG00000006787) #31	DESI1 (ENSCHIG00000017498) #32	XRCC6 (ENSCHIG00000012853) #33	ENSCHIG00000015834	ENSCHIG00000017103	MEI1 (ENSCHIG00000014057)
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.d #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Bos	ANCESTRAL SPECIES	2	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.d #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Bos_a	ANCESTRAL SPECIES	24	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000168153	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.a.a.b	ENSGT00730000111100.d #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218
Domestic yak	MODERN SPECIES	24	ENTHD1 (ENSBGRG00000006865)	GRAP2 (ENSBGRG00000006892)	FAM83F (ENSBGRG00000006932)	TNRC6B (ENSBGRG00000007053)	ADSL (ENSBGRG00000008001) #11	SGSM3 (ENSBGRG00000008503) #12	MRTFA (ENSBGRG00000008675) #13	MCHR1 (ENSBGRG00000009343) #14	SLC25A17 (ENSBGRG00000006056) #15	ENSBGRG00000006125	ST13 (ENSBGRG00000006165) #16	XPNPEP3 (ENSBGRG00000006217) #18	DNAJB7 (ENSBGRG00000006284)	ENSBGRG00000006304	EP300 (ENSBGRG00000006401) #20	L3MBTL2 (ENSBGRG00000006582) #22	CHADL (ENSBGRG00000006835) #23	RANGAP1 (ENSBGRG00000006909) #24	ENSBGRG00000006985	ZC3H7B (ENSBGRG00000007031) #25	TEF (ENSBGRG00000007661) #26	TOB2 (ENSBGRG00000007744)	ACO2 (ENSBGRG00000007814) #28	PHF5A (ENSBGRG00000008433) #27	POLR3H (ENSBGRG00000008506) #29	CSDC2 (ENSBGRG00000008598) #30	PMM1 (ENSBGRG00000008653) #31	ENSBGRG00000008717	ENSBGRG00000008726 #32	DESI1 (ENSBGRG00000008734) #32	XRCC6 (ENSBGRG00000008781) #33
Wild yak	MODERN SPECIES	2416											ENSBMUG00000016028 #16	XPNPEP3 (ENSBMUG00000016068) #18	DNAJB7 (ENSBMUG00000016085)	ENSBMUG00000016140	EP300 (ENSBMUG00000016206) #20	L3MBTL2 (ENSBMUG00000016250) #22	ENSBMUG00000016306 #23	RANGAP1 (ENSBMUG00000016341) #24	ZC3H7B (ENSBMUG00000016375) #25	TEF (ENSBMUG00000016387) #26	ENSBMUG00000016406	PHF5A (ENSBMUG00000016413) #27	ACO2 (ENSBMUG00000016428) #28	POLR3H (ENSBMUG00000016468) #29	CSDC2 (ENSBMUG00000016496) #30	PMM1 (ENSBMUG00000016511) #31	ENSBMUG00000016533	XRCC6 (ENSBMUG00000016669) #33	SNU13 (ENSBMUG00000016711)	ENSBMUG00000016715	MEI1 (ENSBMUG00000016769)
Bos_b	ANCESTRAL SPECIES	30	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100.d #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Cow	MODERN SPECIES	24	ENTHD1 (ENSBTAG00000000326)	GRAP2 (ENSBTAG00000015157)	FAM83F (ENSBTAG00000014247)	TNRC6B (ENSBTAG00000021076)	ADSL (ENSBTAG00000000077) #11	SGSM3 (ENSBTAG00000009624) #12	MRTFA (ENSBTAG00000002630) #13	MCHR1 (ENSBTAG00000004048) #14	SLC25A17 (ENSBTAG00000006200) #15	ENSBTAG00000054845	ST13 (ENSBTAG00000006202) #16	XPNPEP3 (ENSBTAG00000006204) #18	DNAJB7 (ENSBTAG00000006205)	RBX1 (ENSBTAG00000053583) #19	EP300 (ENSBTAG00000016198) #20	L3MBTL2 (ENSBTAG00000030222) #22	CHADL (ENSBTAG00000040106) #23	RANGAP1 (ENSBTAG00000012481) #24	ZC3H7B (ENSBTAG00000002782) #25	TEF (ENSBTAG00000016580) #26	TOB2 (ENSBTAG00000015109)	PHF5A (ENSBTAG00000006423) #27	ACO2 (ENSBTAG00000006429) #28	POLR3H (ENSBTAG00000005311) #29	CSDC2 (ENSBTAG00000004004) #30	PMM1 (ENSBTAG00000004009) #31	DESI1 (ENSBTAG00000047942) #32	XRCC6 (ENSBTAG00000006103) #33	SNU13 (ENSBTAG00000006104)	ENSBTAG00000047629	MEI1 (ENSBTAG00000004488)
Hybrid Bos Indicus	MODERN SPECIES	24	ENTHD1 (ENSBIXG00005028278)	GRAP2 (ENSBIXG00005028301)	FAM83F (ENSBIXG00005004869)	TNRC6B (ENSBIXG00005028516)	ADSL (ENSBIXG00005028664) #11	SGSM3 (ENSBIXG00005028733) #12	ENSBIXG00005028750	MRTFA (ENSBIXG00005002283) #13	MCHR1 (ENSBIXG00005028885) #14	SLC25A17 (ENSBIXG00005005058) #15	ST13 (ENSBIXG00005005077) #16	DNAJB7 (ENSBIXG00005002171)	XPNPEP3 (ENSBIXG00005028956) #18	ENSBIXG00005028979 #19	EP300 (ENSBIXG00005029142) #20	L3MBTL2 (ENSBIXG00005001768) #22	CHADL (ENSBIXG00005001706) #23	RANGAP1 (ENSBIXG00005029195) #24	ZC3H7B (ENSBIXG00005005261) #25	TEF (ENSBIXG00005030291) #26	TOB2 (ENSBIXG00005030282)	PHF5A (ENSBIXG00005030276) #27	ACO2 (ENSBIXG00005030244) #28	POLR3H (ENSBIXG00005030223) #29	CSDC2 (ENSBIXG00005030210) #30	PMM1 (ENSBIXG00005030190) #31	ENSBIXG00005030184	DESI1 (ENSBIXG00005030174) #32	XRCC6 (ENSBIXG00005030124) #33	SNU13 (ENSBIXG00005030086)	ENSBIXG00005030078
American bison	MODERN SPECIES	2520											ST13 (ENSBBBG00000016558) #16	ENSBBBG00000016560	XPNPEP3 (ENSBBBG00000016577) #18	ENSBBBG00000000757 #19	EP300 (ENSBBBG00000004102) #20	L3MBTL2 (ENSBBBG00000008378) #22	RANGAP1 (ENSBBBG00000004143) #24	ZC3H7B (ENSBBBG00000007907) #25	TEF (ENSBBBG00000016815) #26	ENSBBBG00000016832	PHF5A (ENSBBBG00000004165) #27	ACO2 (ENSBBBG00000016876) #28	POLR3H (ENSBBBG00000016919) #29	CSDC2 (ENSBBBG00000004183) #30	PMM1 (ENSBBBG00000016943) #31	DESI1 (ENSBBBG00000016954) #32	XRCC6 (ENSBBBG00000017117) #33	SNU13 (ENSBBBG00000017154)	ENSBBBG00000017162	MEI1 (ENSBBBG00000017211)	CCDC134 (ENSBBBG00000004265)
Siberian musk deer	MODERN SPECIES	1247	ENTHD1 (ENSMMSG00000015164)	GRAP2 (ENSMMSG00000015134)	FAM83F (ENSMMSG00000015097)	TNRC6B (ENSMMSG00000014702)	ADSL (ENSMMSG00000014463) #11	SGSM3 (ENSMMSG00000014416) #12	MRTFA (ENSMMSG00000014290) #13	MCHR1 (ENSMMSG00000014255) #14	ENSMMSG00000014246	SLC25A17 (ENSMMSG00000014156) #15	ST13 (ENSMMSG00000014107) #16	DNAJB7 (ENSMMSG00000014099)	XPNPEP3 (ENSMMSG00000014083) #18	RBX1 (ENSMMSG00000014067) #19	EP300 (ENSMMSG00000013986) #20	L3MBTL2 (ENSMMSG00000013921) #22	CHADL (ENSMMSG00000013880) #23	RANGAP1 (ENSMMSG00000013802) #24	ZC3H7B (ENSMMSG00000013723) #25	TEF (ENSMMSG00000013679) #26	TOB2 (ENSMMSG00000013665)	ENSMMSG00000013644 #27	ACO2 (ENSMMSG00000013563) #28	POLR3H (ENSMMSG00000013540) #29	CSDC2 (ENSMMSG00000013524) #30	PMM1 (ENSMMSG00000013501) #31	DESI1 (ENSMMSG00000013489) #32	XRCC6 (ENSMMSG00000013395) #33	SNU13 (ENSMMSG00000024016)	ENSMMSG00000024007	MEI1 (ENSMMSG00000023993)
Yarkand deer	MODERN SPECIES	14	ENTHD1 (ENSCHYG00000016496)	ENSCHYG00000016578	FAM83F (ENSCHYG00000016679)	TNRC6B (ENSCHYG00000016871)	ENSCHYG00000017987 #11	SGSM3 (ENSCHYG00000020154) #12	MRTFA (ENSCHYG00000018451) #13	MCHR1 (ENSCHYG00000020632) #14	SLC25A17 (ENSCHYG00000020675) #15	ENSCHYG00000020840 #16	XPNPEP3 (ENSCHYG00000020994) #18	DNAJB7 (ENSCHYG00000021227)	ENSCHYG00000021280	ENSCHYG00000021391	EP300 (ENSCHYG00000021494) #20	L3MBTL2 (ENSCHYG00000021964) #22	CHADL (ENSCHYG00000022049) #23	RANGAP1 (ENSCHYG00000022092) #24	ZC3H7B (ENSCHYG00000022171) #25	TEF (ENSCHYG00000022489) #26	TOB2 (ENSCHYG00000022537)	PHF5A (ENSCHYG00000022548) #27	ACO2 (ENSCHYG00000022583) #28	POLR3H (ENSCHYG00000022721) #29	CSDC2 (ENSCHYG00000022821) #30	PMM1 (ENSCHYG00000022842) #31	DESI1 (ENSCHYG00000022886) #32	XRCC6 (ENSCHYG00000022928) #33	SNU13 (ENSCHYG00000023097)	ENSCHYG00000023150	MEI1 (ENSCHYG00000023169)
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000163470	ENSGT00940000155618.fb.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.m #33	ENSGT00550000074840.y.b.k	ENSGT00900000141218	ENSGT00390000002077
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.m #33	ENSGT00550000074840.y.b.k	ENSGT00900000141218	ENSGT00390000002077
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518.g #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.m #33	ENSGT00550000074840.y.b.k	ENSGT00390000002077	ENSGT00390000020164
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00420000029792.i	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518.g #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.m #33	ENSGT00550000074840.y.b.k	ENSGT00390000002077	ENSGT00390000020164
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00420000029792.i	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518.g #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B.m #33	ENSGT00550000074840.y.b.k	ENSGT00390000002077	ENSGT00390000020164
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	111	CACNA1I (ENSDLEG00000011201)	ENTHD1 (ENSDLEG00000011347)	GRAP2 (ENSDLEG00000011374)	FAM83F (ENSDLEG00000011396)	TNRC6B (ENSDLEG00000011432)	ADSL (ENSDLEG00000011502) #11	SGSM3 (ENSDLEG00000011556) #12	MRTFA (ENSDLEG00000011650) #13	MCHR1 (ENSDLEG00000011702) #14	SLC25A17 (ENSDLEG00000011720) #15	ENSDLEG00000011732 #16	XPNPEP3 (ENSDLEG00000011748) #18	RBX1 (ENSDLEG00000011777) #19	ENSDLEG00000011787	EP300 (ENSDLEG00000011805) #20	ENSDLEG00000011889 #22	ENSDLEG00000015706 #23	ENSDLEG00000015729 #24	ENSDLEG00000015788 #22	ENSDLEG00000015952 #23	ENSDLEG00000015992 #24	ZC3H7B (ENSDLEG00000016127) #25	TEF (ENSDLEG00000016157) #26	TOB2 (ENSDLEG00000016165)	PHF5A (ENSDLEG00000016171) #27	ACO2 (ENSDLEG00000016194) #28	POLR3H (ENSDLEG00000016302) #29	CSDC2 (ENSDLEG00000016311) #30	PMM1 (ENSDLEG00000016320) #31	DESI1 (ENSDLEG00000016339) #32	ENSDLEG00000016354
Beluga whale	MODERN SPECIES	111	FAM83F (ENSDLEG00000011396)	TNRC6B (ENSDLEG00000011432)	ADSL (ENSDLEG00000011502) #11	SGSM3 (ENSDLEG00000011556) #12	MRTFA (ENSDLEG00000011650) #13	MCHR1 (ENSDLEG00000011702) #14	SLC25A17 (ENSDLEG00000011720) #15	ENSDLEG00000011732 #16	XPNPEP3 (ENSDLEG00000011748) #18	RBX1 (ENSDLEG00000011777) #19	ENSDLEG00000011787	EP300 (ENSDLEG00000011805) #20	ENSDLEG00000011889 #22	ENSDLEG00000015706 #23	ENSDLEG00000015729 #24	ENSDLEG00000015788 #22	ENSDLEG00000015952 #23	ENSDLEG00000015992 #24	ZC3H7B (ENSDLEG00000016127) #25	TEF (ENSDLEG00000016157) #26	TOB2 (ENSDLEG00000016165)	PHF5A (ENSDLEG00000016171) #27	ACO2 (ENSDLEG00000016194) #28	POLR3H (ENSDLEG00000016302) #29	CSDC2 (ENSDLEG00000016311) #30	PMM1 (ENSDLEG00000016320) #31	DESI1 (ENSDLEG00000016339) #32	ENSDLEG00000016354	ENSDLEG00000016391 #33	SNU13 (ENSDLEG00000016619)	MEI1 (ENSDLEG00000016651)
Narwhal	MODERN SPECIES	313	CACNA1I (ENSMMNG00015015894)	ENTHD1 (ENSMMNG00015016228)	GRAP2 (ENSMMNG00015016272)	FAM83F (ENSMMNG00015016316)	TNRC6B (ENSMMNG00015016449)	ADSL (ENSMMNG00015016797) #11	SGSM3 (ENSMMNG00015016971) #12	MRTFA (ENSMMNG00015017058) #13	MCHR1 (ENSMMNG00015017183) #14	SLC25A17 (ENSMMNG00015017233) #15	ENSMMNG00015017322 #16	ENSMMNG00015017374 #18	ENSMMNG00015017418 #19	ENSMMNG00015017443	EP300 (ENSMMNG00015017471) #20	L3MBTL2 (ENSMMNG00015017671) #22	CHADL (ENSMMNG00015017707) #23	RANGAP1 (ENSMMNG00015017739) #24	ZC3H7B (ENSMMNG00015017794) #25	TEF (ENSMMNG00015017847) #26	TOB2 (ENSMMNG00015017903)	PHF5A (ENSMMNG00015017910) #27	ACO2 (ENSMMNG00015017952) #28	POLR3H (ENSMMNG00015018103) #29	CSDC2 (ENSMMNG00015018146) #30	PMM1 (ENSMMNG00015018177) #31	DESI1 (ENSMMNG00015018207) #32	ENSMMNG00015018237 #33	ENSMMNG00015018285	SNU13 (ENSMMNG00015018317)	MEI1 (ENSMMNG00015018390)
Vaquita	MODERN SPECIES	1	ENTHD1 (ENSPSNG00000008777)	GRAP2 (ENSPSNG00000008719)	FAM83F (ENSPSNG00000008652)	TNRC6B (ENSPSNG00000008458)	ADSL (ENSPSNG00000008171) #11	SGSM3 (ENSPSNG00000008035) #12	MRTFA (ENSPSNG00000007857) #13	MCHR1 (ENSPSNG00000007750) #14	SLC25A17 (ENSPSNG00000007697) #15	ENSPSNG00000007658 #16	XPNPEP3 (ENSPSNG00000007604) #18	RBX1 (ENSPSNG00000007572) #19	ENSPSNG00000007559	EP300 (ENSPSNG00000007446) #20	ENSPSNG00000007413	L3MBTL2 (ENSPSNG00000007368) #22	CHADL (ENSPSNG00000007294) #23	RANGAP1 (ENSPSNG00000007244) #24	ZC3H7B (ENSPSNG00000007187) #25	TEF (ENSPSNG00000007130) #26	TOB2 (ENSPSNG00000007102)	PHF5A (ENSPSNG00000007072) #27	ACO2 (ENSPSNG00000006999) #28	POLR3H (ENSPSNG00000006925) #29	CSDC2 (ENSPSNG00000006894) #30	PMM1 (ENSPSNG00000006869) #31	DESI1 (ENSPSNG00000006766) #32	ENSPSNG00000006727 #33	SNU13 (ENSPSNG00000006667)	MEI1 (ENSPSNG00000006612)	CCDC134 (ENSPSNG00000006568)
Dolphin	MODERN SPECIES	3094															EP300 (ENSTTRG00000003342) #20	L3MBTL2 (ENSTTRG00000003350) #22	CHADL (ENSTTRG00000003358) #23	RANGAP1 (ENSTTRG00000003359) #24	ZC3H7B (ENSTTRG00000003362) #25	TEF (ENSTTRG00000003365) #26	TOB2 (ENSTTRG00000003366)	PHF5A (ENSTTRG00000003369) #27	ACO2 (ENSTTRG00000003371) #28	POLR3H (ENSTTRG00000003373) #29
Sperm whale	MODERN SPECIES	38																L3MBTL2 (ENSPCTG00005022052) #22	CHADL (ENSPCTG00005022074) #23	RANGAP1 (ENSPCTG00005022082) #24	ZC3H7B (ENSPCTG00005022087) #25	TEF (ENSPCTG00005022099) #26	TOB2 (ENSPCTG00005022106)
Blue whale	MODERN SPECIES	1	CACNA1I (ENSBMSG00010010289)	ENTHD1 (ENSBMSG00010010382)	GRAP2 (ENSBMSG00010010395)	FAM83F (ENSBMSG00010010409)	TNRC6B (ENSBMSG00010010473)	ENSBMSG00010010564	ADSL (ENSBMSG00010010596) #11	SGSM3 (ENSBMSG00010010739) #12	MRTFA (ENSBMSG00010010792) #13	MCHR1 (ENSBMSG00010010832) #14	SLC25A17 (ENSBMSG00010010859) #15	ST13 (ENSBMSG00010010885) #16	ENSBMSG00010010899 #18	ENSBMSG00010010940 #19	EP300 (ENSBMSG00010010998) #20	L3MBTL2 (ENSBMSG00010011148) #22	CHADL (ENSBMSG00010011175) #23	RANGAP1 (ENSBMSG00010011194) #24	ZC3H7B (ENSBMSG00010011209) #25	ENSBMSG00010011228 #26	TOB2 (ENSBMSG00010013844)	ENSBMSG00010013857 #27	ACO2 (ENSBMSG00010013926) #28	POLR3H (ENSBMSG00010014040) #29	ENSBMSG00010014114	CSDC2 (ENSBMSG00010014140) #30	PMM1 (ENSBMSG00010014166) #31	DESI1 (ENSBMSG00010014206) #32	ENSBMSG00010014265 #33	ENSBMSG00010014449	MEI1 (ENSBMSG00010014550)
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Ursus	ANCESTRAL SPECIES	64									ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
American black bear	MODERN SPECIES	742														RBX1 (ENSUAMG00000023721) #19	EP300 (ENSUAMG00000023761) #20	L3MBTL2 (ENSUAMG00000024453) #22	CHADL (ENSUAMG00000024456) #23	RANGAP1 (ENSUAMG00000024459) #24
Polar bear	MODERN SPECIES	248									MCHR1 (ENSUMAG00000021761) #14	SLC25A17 (ENSUMAG00000021756) #15	ST13 (ENSUMAG00000021749) #16	DNAJB7 (ENSUMAG00000021748)	XPNPEP3 (ENSUMAG00000021746) #18	RBX1 (ENSUMAG00000021734) #19	EP300 (ENSUMAG00000021277) #20	L3MBTL2 (ENSUMAG00000021117) #22	RANGAP1 (ENSUMAG00000021110) #24	ZC3H7B (ENSUMAG00000021049) #25	TEF (ENSUMAG00000021034) #26	PHF5A (ENSUMAG00000021030) #27	ACO2 (ENSUMAG00000021024) #28	POLR3H (ENSUMAG00000021018) #29	CSDC2 (ENSUMAG00000021015) #30	PMM1 (ENSUMAG00000021010) #31	DESI1 (ENSUMAG00000021006) #32	XRCC6 (ENSUMAG00000021004) #33	SNU13 (ENSUMAG00000021000)	ENSUMAG00000020998	MEI1 (ENSUMAG00000020981)	CCDC134 (ENSUMAG00000020966)	SREBF2 (ENSUMAG00000020699)
Giant Panda	MODERN SPECIES	6	ENTHD1 (ENSAMEG00000010995)	GRAP2 (ENSAMEG00000011003)	ENSAMEG00000011020	ENSAMEG00000026240	TNRC6B (ENSAMEG00000011025)	ADSL (ENSAMEG00000011062) #11	SGSM3 (ENSAMEG00000011110) #12	MRTFA (ENSAMEG00000011151) #13	MCHR1 (ENSAMEG00000013865) #14	SLC25A17 (ENSAMEG00000013867) #15	ST13 (ENSAMEG00000013880) #16	DNAJB7 (ENSAMEG00000019443)	ENSAMEG00000024588	EP300 (ENSAMEG00000013940) #20	ENSAMEG00000031394	L3MBTL2 (ENSAMEG00000014010) #22	CHADL (ENSAMEG00000014053) #23	RANGAP1 (ENSAMEG00000014068) #24	ZC3H7B (ENSAMEG00000002171) #25	TEF (ENSAMEG00000027518) #26	TOB2 (ENSAMEG00000018561)	PHF5A (ENSAMEG00000015687) #27	ACO2 (ENSAMEG00000015641) #28	POLR3H (ENSAMEG00000015630) #29	CSDC2 (ENSAMEG00000015626) #30	PMM1 (ENSAMEG00000015609) #31	DESI1 (ENSAMEG00000015602) #32	XRCC6 (ENSAMEG00000015579) #33	SNU13 (ENSAMEG00000015574)	ENSAMEG00000030983	MEI1 (ENSAMEG00000015554)
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
American mink	MODERN SPECIES	105	ENTHD1 (ENSNVIG00000001134)	GRAP2 (ENSNVIG00000001114)	ENSNVIG00000001106	FAM83F (ENSNVIG00000001092)	TNRC6B (ENSNVIG00000000926)	ADSL (ENSNVIG00000000889) #11	SGSM3 (ENSNVIG00000000810) #12	ENSNVIG00000000800 #13	ENSNVIG00000000774 #13	MCHR1 (ENSNVIG00000000746) #14	SLC25A17 (ENSNVIG00000000669) #15	DNAJB7 (ENSNVIG00000000663)	XPNPEP3 (ENSNVIG00000000649) #18	RBX1 (ENSNVIG00000000637) #19	EP300 (ENSNVIG00000000593) #20	L3MBTL2 (ENSNVIG00000000543) #22	CHADL (ENSNVIG00000000532) #23	RANGAP1 (ENSNVIG00000000510) #24	ZC3H7B (ENSNVIG00000000487) #25	TEF (ENSNVIG00000000478) #26	TOB2 (ENSNVIG00000000471)	PHF5A (ENSNVIG00000000451) #27	ACO2 (ENSNVIG00000000421) #28	RPC8 (ENSNVIG00000000359) #29	CSDC2 (ENSNVIG00000000351) #30	PMM1 (ENSNVIG00000000343) #31	DESI1 (ENSNVIG00000000338) #32	XRCC6 (ENSNVIG00000000144) #33	SNU13 (ENSNVIG00000000081)	ENSNVIG00000000049	MEI1 (ENSNVIG00000022357)
Ferret	MODERN SPECIES	324					TNRC6B (ENSMPUG00000016442)	ADSL (ENSMPUG00000016441) #11	SGSM3 (ENSMPUG00000016439) #12	MRTFA (ENSMPUG00000016438) #13	MCHR1 (ENSMPUG00000016437) #14	SLC25A17 (ENSMPUG00000016436) #15	ST13 (ENSMPUG00000016432) #16	DNAJB7 (ENSMPUG00000019596)	XPNPEP3 (ENSMPUG00000016431) #18	RBX1 (ENSMPUG00000016430) #19	EP300 (ENSMPUG00000016427) #20	L3MBTL2 (ENSMPUG00000016425) #22	CHADL (ENSMPUG00000016416) #23	ENSMPUG00000016414	RANGAP1 (ENSMPUG00000016411) #24	ZC3H7B (ENSMPUG00000016409) #25	TEF (ENSMPUG00000016407) #26	TOB2 (ENSMPUG00000019594)	PHF5A (ENSMPUG00000016398) #27	ACO2 (ENSMPUG00000016396) #28	POLR3H (ENSMPUG00000016395) #29	CSDC2 (ENSMPUG00000016392) #30	PMM1 (ENSMPUG00000016390) #31	DESI1 (ENSMPUG00000016385) #32	SNU13 (ENSMPUG00000016384)	XRCC6 (ENSMPUG00000016382) #33	ENSMPUG00000016380
Canidae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730	ENSGT00990000207858	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00950000182802.B.a.a.a.a.i.d.d.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.c.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Dingo	MODERN SPECIES	307	ENSCAFG00020002362	GRAP2 (ENSCAFG00020002345)	FAM83F (ENSCAFG00020002339)	ENSCAFG00020002329	TNRC6B (ENSCAFG00020002189)	ADSL (ENSCAFG00020002150) #11	SGSM3 (ENSCAFG00020002141) #12	MRTFA (ENSCAFG00020002129) #13	MCHR1 (ENSCAFG00020002114) #14	SLC25A17 (ENSCAFG00020002111) #15	ENSCAFG00020002103	XPNPEP3 (ENSCAFG00020002086) #18	RBX1 (ENSCAFG00020002079) #19	ENSCAFG00020002075 #20	ENSCAFG00020002042 #20	L3MBTL2 (ENSCAFG00020002034) #22	CHADL (ENSCAFG00020002027) #23	RANGAP1 (ENSCAFG00020002019) #24	ZC3H7B (ENSCAFG00020002005) #25	TEF (ENSCAFG00020001995) #26	TOB2 (ENSCAFG00020001990)	PHF5A (ENSCAFG00020001984) #27	ACO2 (ENSCAFG00020001976) #28	POLR3H (ENSCAFG00020001964) #29	CSDC2 (ENSCAFG00020001951) #30	PMM1 (ENSCAFG00020001948) #31	ENSCAFG00020001943	DESI1 (ENSCAFG00020001937) #32	XRCC6 (ENSCAFG00020001627) #33	ENSCAFG00020001539	ENSCAFG00020001537
Dog	MODERN SPECIES	1	ENSCAFG00845021105	GRAP2 (ENSCAFG00845021051)	FAM83F (ENSCAFG00845021004)	ENSCAFG00845020976	TNRC6B (ENSCAFG00845020617)	ADSL (ENSCAFG00845020328) #11	SGSM3 (ENSCAFG00845020097) #12	MRTFA (ENSCAFG00845019751) #13	MCHR1 (ENSCAFG00845019660) #14	MDH2 (ENSCAFG00845019601)	SLC25A17 (ENSCAFG00845019500) #15	ST13 (ENSCAFG00845019349) #16	XPNPEP3 (ENSCAFG00845019212) #18	RBX1 (ENSCAFG00845019033) #19	EP300 (ENSCAFG00845018383) #20	L3MBTL2 (ENSCAFG00845017974) #22	RANGAP1 (ENSCAFG00845017556) #24	ZC3H7B (ENSCAFG00845017344) #25	TEF (ENSCAFG00845017239) #26	TOB2 (ENSCAFG00845017159)	PHF5A (ENSCAFG00845017076) #27	ACO2 (ENSCAFG00845016969) #28	POLR3H (ENSCAFG00845016808) #29	CSDC2 (ENSCAFG00845016721) #30	PMM1 (ENSCAFG00845016625) #31	ENSCAFG00845016514 #32	XRCC6 (ENSCAFG00845016282) #33	SNU13 (ENSCAFG00845016061)	ENSCAFG00845016016	MEI1 (ENSCAFG00845015865)	CCDC134 (ENSCAFG00845015779)
Red fox	MODERN SPECIES	134	RPS19BP1 (ENSVVUG00000014521)	CACNA1I (ENSVVUG00000007487)	ENTHD1 (ENSVVUG00000007235)	ENSVVUG00000007232	GRAP2 (ENSVVUG00000007218)	TNRC6B (ENSVVUG00000007064)	ADSL (ENSVVUG00000007041) #11	SGSM3 (ENSVVUG00000007031) #12	MRTFA (ENSVVUG00000006989) #13	MCHR1 (ENSVVUG00000006978) #14	ENSVVUG00000006921 #15	ENSVVUG00000006910	XPNPEP3 (ENSVVUG00000006901) #18	RBX1 (ENSVVUG00000006879) #19	EP300 (ENSVVUG00000003883) #20	L3MBTL2 (ENSVVUG00000003709) #22	CHADL (ENSVVUG00000003700) #23	RANGAP1 (ENSVVUG00000003690) #24	ZC3H7B (ENSVVUG00000003660) #25	TEF (ENSVVUG00000003655) #26	TOB2 (ENSVVUG00000003649)	PHF5A (ENSVVUG00000003634) #27	ACO2 (ENSVVUG00000003619) #28	POLR3H (ENSVVUG00000003543) #29	CSDC2 (ENSVVUG00000003532) #30	PMM1 (ENSVVUG00000003525) #31	DESI1 (ENSVVUG00000003501) #32	ENSVVUG00000003442 #33	ENSVVUG00000003430	ENSVVUG00000003422	MEI1 (ENSVVUG00000003315)
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Panthera	ANCESTRAL SPECIES		ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
lion	MODERN SPECIES	7	GRAP2 (ENSPLOG00000004745)	FAM83F (ENSPLOG00000004760)	TNRC6B (ENSPLOG00000004859)	ADSL (ENSPLOG00000005019) #11	SGSM3 (ENSPLOG00000005149) #12	ENSPLOG00000005209 #13	MCHR1 (ENSPLOG00000010815) #14	SLC25A17 (ENSPLOG00000010995) #15	ENSPLOG00000011208 #16	XPNPEP3 (ENSPLOG00000011320) #18	ENSPLOG00000011365	ENSPLOG00000011391	ENSPLOG00000011428	RBX1 (ENSPLOG00000011457) #19	EP300 (ENSPLOG00000011519) #20	L3MBTL2 (ENSPLOG00000011847) #22	CHADL (ENSPLOG00000012009) #23	RANGAP1 (ENSPLOG00000012100) #24	ZC3H7B (ENSPLOG00000012165) #25	TEF (ENSPLOG00000012484) #26	TOB2 (ENSPLOG00000012540)	PHF5A (ENSPLOG00000012553) #27	ACO2 (ENSPLOG00000012601) #28	POLR3H (ENSPLOG00000012763) #29	CSDC2 (ENSPLOG00000012880) #30	PMM1 (ENSPLOG00000012988) #31	DESI1 (ENSPLOG00000013041) #32	XRCC6 (ENSPLOG00000013139) #33	ENSPLOG00000013318	ENSPLOG00000013474	MEI1 (ENSPLOG00000013509)
leopard	MODERN SPECIES	13	CACNA1I (ENSPPRG00000022739)	ENTHD1 (ENSPPRG00000022103)	GRAP2 (ENSPPRG00000021941)	FAM83F (ENSPPRG00000021618)	TNRC6B (ENSPPRG00000017741)	ADSL (ENSPPRG00000014761) #11	SGSM3 (ENSPPRG00000013743) #12	ENSPPRG00000013444 #13	MCHR1 (ENSPPRG00000012224) #14	SLC25A17 (ENSPPRG00000011948) #15	ST13 (ENSPPRG00000010932) #16	XPNPEP3 (ENSPPRG00000010490) #18	ENSPPRG00000021477	RBX1 (ENSPPRG00000010370) #19	EP300 (ENSPPRG00000009984) #20	L3MBTL2 (ENSPPRG00000007633) #22	CHADL (ENSPPRG00000007361) #23	RANGAP1 (ENSPPRG00000007346) #24	ZC3H7B (ENSPPRG00000006647) #25	TEF (ENSPPRG00000006357) #26	ENSPPRG00000006258	TOB2 (ENSPPRG00000021427)	PHF5A (ENSPPRG00000006194) #27	ACO2 (ENSPPRG00000005996) #28	POLR3H (ENSPPRG00000005361) #29	CSDC2 (ENSPPRG00000005049) #30	PMM1 (ENSPPRG00000004746) #31	DESI1 (ENSPPRG00000004562) #32	XRCC6 (ENSPPRG00000004390) #33	SNU13 (ENSPPRG00000004114)	ENSPPRG00000003751
Tiger	MODERN SPECIES	130	CACNA1I (ENSPTIG00000020353)	ENTHD1 (ENSPTIG00000021807)	GRAP2 (ENSPTIG00000021945)	FAM83F (ENSPTIG00000021999)	TNRC6B (ENSPTIG00000022064)	ADSL (ENSPTIG00000007894) #11	SGSM3 (ENSPTIG00000009612) #12	ENSPTIG00000010561 #13	MCHR1 (ENSPTIG00000012057) #14	SLC25A17 (ENSPTIG00000013463) #15	ST13 (ENSPTIG00000015971) #16	XPNPEP3 (ENSPTIG00000018765) #18	ENSPTIG00000003092	RBX1 (ENSPTIG00000020939) #19	EP300 (ENSPTIG00000021151) #20	L3MBTL2 (ENSPTIG00000010861) #22	RANGAP1 (ENSPTIG00000012387) #24	ZC3H7B (ENSPTIG00000013113) #25	TEF (ENSPTIG00000013705) #26	TOB2 (ENSPTIG00000004228)	PHF5A (ENSPTIG00000014228) #27	ACO2 (ENSPTIG00000014744) #28	POLR3H (ENSPTIG00000016286) #29	CSDC2 (ENSPTIG00000017894) #30	PMM1 (ENSPTIG00000018216) #31	XRCC6 (ENSPTIG00000019026) #33	DESI1 (ENSPTIG00000020182) #32	SNU13 (ENSPTIG00000021078)	ENSPTIG00000021403	MEI1 (ENSPTIG00000021687)	CCDC134 (ENSPTIG00000003009)
Cat	MODERN SPECIES	238	GRAP2 (ENSFCAG00000013507)	FAM83F (ENSFCAG00000013509)	TNRC6B (ENSFCAG00000004791)	ADSL (ENSFCAG00000004798) #11	SGSM3 (ENSFCAG00000004800) #12	MRTFA (ENSFCAG00000004802) #13	MCHR1 (ENSFCAG00000015439) #14	SLC25A17 (ENSFCAG00000015440) #15	ST13 (ENSFCAG00000027002) #16	XPNPEP3 (ENSFCAG00000040722) #18	DNAJB7 (ENSFCAG00000015442)	ENSFCAG00000035664	RBX1 (ENSFCAG00000032024) #19	EP300 (ENSFCAG00000005002) #20	ENSFCAG00000026993	L3MBTL2 (ENSFCAG00000003668) #22	CHADL (ENSFCAG00000042374) #23	RANGAP1 (ENSFCAG00000003669) #24	ZC3H7B (ENSFCAG00000003670) #25	TEF (ENSFCAG00000032491) #26	TOB2 (ENSFCAG00000003675)	PHF5A (ENSFCAG00000003676) #27	ACO2 (ENSFCAG00000018526) #28	POLR3H (ENSFCAG00000006684) #29	CSDC2 (ENSFCAG00000038283) #30	PMM1 (ENSFCAG00000006685) #31	DESI1 (ENSFCAG00000033281) #32	XRCC6 (ENSFCAG00000018784) #33	SNU13 (ENSFCAG00000027664)	ENSFCAG00000025013	MEI1 (ENSFCAG00000014285)
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00900000141218	ENSGT00390000002077
Greater horseshoe bat	MODERN SPECIES	1	RPS19BP1 (ENSRFEG00010001401)	CACNA1I (ENSRFEG00010001295)	ENTHD1 (ENSRFEG00010001236)	GRAP2 (ENSRFEG00010001214)	FAM83F (ENSRFEG00010001186)	TNRC6B (ENSRFEG00010000889)	ADSL (ENSRFEG00010000674) #11	SGSM3 (ENSRFEG00010000625) #12	MRTFA (ENSRFEG00010000566) #13	MCHR1 (ENSRFEG00010000490) #14	SLC25A17 (ENSRFEG00010000386) #15	ENSRFEG00010000294 #16	XPNPEP3 (ENSRFEG00010018976) #18	ENSRFEG00010018938 #19	EP300 (ENSRFEG00010018626) #20	L3MBTL2 (ENSRFEG00010018570) #22	CHADL (ENSRFEG00010018530) #23	RANGAP1 (ENSRFEG00010018251) #24	ZC3H7B (ENSRFEG00010018168) #25	TEF (ENSRFEG00010018137) #26	TOB2 (ENSRFEG00010018126)	PHF5A (ENSRFEG00010018076) #27	ACO2 (ENSRFEG00010017740) #28	POLR3H (ENSRFEG00010017658) #29	CSDC2 (ENSRFEG00010017619) #30	PMM1 (ENSRFEG00010017564) #31	DESI1 (ENSRFEG00010017478) #32	XRCC6 (ENSRFEG00010017302) #33	SNU13 (ENSRFEG00010017169)	MEI1 (ENSRFEG00010016537)	CCDC134 (ENSRFEG00010016458)
Microbat	MODERN SPECIES	1176	GRAP2 (ENSMLUG00000000549)	FAM83F (ENSMLUG00000015534)	TNRC6B (ENSMLUG00000008765)	ENSMLUG00000023638	ADSL (ENSMLUG00000005441) #11	SGSM3 (ENSMLUG00000005428) #12	MRTFA (ENSMLUG00000005421) #13	MCHR1 (ENSMLUG00000003571) #14	SLC25A17 (ENSMLUG00000007749) #15	ST13 (ENSMLUG00000007764) #16	DNAJB7 (ENSMLUG00000007809)	XPNPEP3 (ENSMLUG00000007787) #18	ENSMLUG00000007815 #19	ENSMLUG00000027424	EP300 (ENSMLUG00000014810) #20	L3MBTL2 (ENSMLUG00000008858) #22	CHADL (ENSMLUG00000008892) #23	RANGAP1 (ENSMLUG00000008908) #24	ZC3H7B (ENSMLUG00000003292) #25	TEF (ENSMLUG00000002459) #26	TOB2 (ENSMLUG00000002462)	PHF5A (ENSMLUG00000002465) #27	ACO2 (ENSMLUG00000002472) #28	POLR3H (ENSMLUG00000002487) #29	CSDC2 (ENSMLUG00000002495) #30	PMM1 (ENSMLUG00000002503) #31	DESI1 (ENSMLUG00000002511) #32	XRCC6 (ENSMLUG00000002516) #33	SNU13 (ENSMLUG00000002526)	ENSMLUG00000023695	ENSMLUG00000026652
Megabat	MODERN SPECIES	3648															EP300 (ENSPVAG00000012771) #20	L3MBTL2 (ENSPVAG00000012775) #22	CHADL (ENSPVAG00000012779) #23	RANGAP1 (ENSPVAG00000012781) #24
Equus	ANCESTRAL SPECIES	21	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000168153	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.z	ENSGT00900000141218	ENSGT00390000002077
Donkey	MODERN SPECIES	11	ENTHD1 (ENSEASG00005005352)	GRAP2 (ENSEASG00005005345)	FAM83F (ENSEASG00005005338)	TNRC6B (ENSEASG00005005306)	ADSL (ENSEASG00005002850) #11	SGSM3 (ENSEASG00005002165) #12	MRTFA (ENSEASG00005002011) #13	MCHR1 (ENSEASG00005001962) #14	ENSEASG00005001954	SLC25A17 (ENSEASG00005001938) #15	ST13 (ENSEASG00005001769) #16	DNAJB7 (ENSEASG00005027112)	XPNPEP3 (ENSEASG00005001716) #18	ENSEASG00005024494	EP300 (ENSEASG00005001674) #20	L3MBTL2 (ENSEASG00005001665) #22	CHADL (ENSEASG00005001659) #23	RANGAP1 (ENSEASG00005001602) #24	ZC3H7B (ENSEASG00005001577) #25	TEF (ENSEASG00005001571) #26	TOB2 (ENSEASG00005031738)	ACO2 (ENSEASG00005001546) #28	POLR3H (ENSEASG00005001539) #29	CSDC2 (ENSEASG00005031038) #30	PMM1 (ENSEASG00005001528) #31	DESI1 (ENSEASG00005034212) #32	XRCC6 (ENSEASG00005001514) #33	ENSEASG00005036377	ENSEASG00005035516	MEI1 (ENSEASG00005001488)	CCDC134 (ENSEASG00005001482)
Horse	MODERN SPECIES	20	CACNA1I (ENSECAG00000010223)	ENTHD1 (ENSECAG00000018973)	GRAP2 (ENSECAG00000019768)	FAM83F (ENSECAG00000009129)	TNRC6B (ENSECAG00000009759)	SGSM3 (ENSECAG00000022296) #12	MRTFA (ENSECAG00000013950) #13	MCHR1 (ENSECAG00000006511) #14	ENSECAG00000000999	SLC25A17 (ENSECAG00000008907) #15	ST13 (ENSECAG00000015838) #16	XPNPEP3 (ENSECAG00000018457) #18	DNAJB7 (ENSECAG00000050931)	RBX1 (ENSECAG00000021493)	EP300 (ENSECAG00000009327) #20	L3MBTL2 (ENSECAG00000010476) #22	CHADL (ENSECAG00000023119) #23	RANGAP1 (ENSECAG00000024092) #24	ZC3H7B (ENSECAG00000010103) #25	TEF (ENSECAG00000018137) #26	TOB2 (ENSECAG00000001192)	ACO2 (ENSECAG00000023762) #28	PHF5A (ENSECAG00000023225) #27	POLR3H (ENSECAG00000019715) #29	CSDC2 (ENSECAG00000022234) #30	PMM1 (ENSECAG00000000302) #31	DESI1 (ENSECAG00000011960) #32	XRCC6 (ENSECAG00000017563) #33	SNU13 (ENSECAG00000000375)	ENSECAG00000055209	MEI1 (ENSECAG00000000597)
Eulipotyphla	ANCESTRAL SPECIES	1854																ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23
Common shrew	MODERN SPECIES	91																ENSSARG00000009513 #22
Hedgehog	MODERN SPECIES	411																L3MBTL2 (ENSEEUG00000004477) #22	ENSEEUG00000004684 #23
Atlantogenata	ANCESTRAL SPECIES	36	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000168153	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00550000074840.z	ENSGT00900000141218
Xenarthra	ANCESTRAL SPECIES	81										ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000168153	ENSGT00940000153840.a.b #22	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.y.b	ENSGT00550000074840.y.a	ENSGT00900000141218	ENSGT00390000002077
Sloth	MODERN SPECIES	275																ENSCHOG00000007020 #22
Armadillo	MODERN SPECIES	4707							DSG4 (ENSDNOG00000009671)	DSG1 (ENSDNOG00000019391)	DSC1 (ENSDNOG00000010752)	MCHR1 (ENSDNOG00000031210) #14	SLC25A17 (ENSDNOG00000013240) #15	ENSDNOG00000046244 #16	DNAJB7 (ENSDNOG00000040305)	XPNPEP3 (ENSDNOG00000046084) #18	ENSDNOG00000007595	L3MBTL2 (ENSDNOG00000032804) #22	ENSDNOG00000006672 #24	ZC3H7B (ENSDNOG00000007676) #25	TEF (ENSDNOG00000035257) #26	TOB2 (ENSDNOG00000016431)	PHF5A (ENSDNOG00000034362) #27	ACO2 (ENSDNOG00000018156) #28	POLR3H (ENSDNOG00000025527) #29	CSDC2 (ENSDNOG00000013639) #30	PMM1 (ENSDNOG00000036218) #31	DESI1 (ENSDNOG00000040575) #32	XRCC6 (ENSDNOG00000018356) #33	ENSDNOG00000044768	ENSDNOG00000032337	MEI1 (ENSDNOG00000001581)	CCDC134 (ENSDNOG00000001589)
Afrotheria	ANCESTRAL SPECIES	33	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.z	ENSGT00900000141218	ENSGT00390000002077
Afrotheria_a	ANCESTRAL SPECIES	33	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840.z	ENSGT00900000141218	ENSGT00390000002077
Elephant	MODERN SPECIES	544	CACNA1I (ENSLAFG00000006106)	ENTHD1 (ENSLAFG00000014942)	GRAP2 (ENSLAFG00000006957)	FAM83F (ENSLAFG00000016675)	TNRC6B (ENSLAFG00000014473)	ADSL (ENSLAFG00000014483) #11	SGSM3 (ENSLAFG00000001295) #12	MRTFA (ENSLAFG00000030989) #13	MCHR1 (ENSLAFG00000003353) #14	SLC25A17 (ENSLAFG00000011500) #15	ST13 (ENSLAFG00000007303) #16	DNAJB7 (ENSLAFG00000007309)	XPNPEP3 (ENSLAFG00000007310) #18	RBX1 (ENSLAFG00000008795) #19	EP300 (ENSLAFG00000012289) #20	L3MBTL2 (ENSLAFG00000012307) #22	CHADL (ENSLAFG00000030376) #23	RANGAP1 (ENSLAFG00000000314) #24	ZC3H7B (ENSLAFG00000013268) #25	TEF (ENSLAFG00000013151) #26	TOB2 (ENSLAFG00000027484)	PHF5A (ENSLAFG00000028840) #27	ACO2 (ENSLAFG00000006030) #28	POLR3H (ENSLAFG00000006033) #29	CSDC2 (ENSLAFG00000027155) #30	PMM1 (ENSLAFG00000002396) #31	DESI1 (ENSLAFG00000029375) #32	ENSLAFG00000011017 #33	SNU13 (ENSLAFG00000011026)	ENSLAFG00000020576	ENSLAFG00000027253
Hyrax	MODERN SPECIES	233																L3MBTL2 (ENSPCAG00000015064) #22
Tenrec	MODERN SPECIES	366																L3MBTL2 (ENSETEG00000013728) #22	ENSETEG00000013733 #23
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b.m #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b.m #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Common wonbat	MODERN SPECIES	135	ENSVURG00010002916	CACNA1I (ENSVURG00010002838)	ENSVURG00010002821	GRAP2 (ENSVURG00010002813)	FAM83F (ENSVURG00010002796)	TNRC6B (ENSVURG00010002621)	ADSL (ENSVURG00010002523) #11	SGSM3 (ENSVURG00010002459) #12	MRTFA (ENSVURG00010002430) #13	MCHR1 (ENSVURG00010002417) #14	SLC25A17 (ENSVURG00010002406) #15	ENSVURG00010002387 #16	XPNPEP3 (ENSVURG00010002164) #18	RBX1 (ENSVURG00010002126) #19	EP300 (ENSVURG00010002025) #20	L3MBTL2 (ENSVURG00010001993) #22	ENSVURG00010001987 #23	ENSVURG00010001895 #23	RANGAP1 (ENSVURG00010001814) #24	ZC3H7B (ENSVURG00010001772) #25	TEF (ENSVURG00010001759) #26	TOB2 (ENSVURG00010001752)	PHF5A (ENSVURG00010001740) #27	ACO2 (ENSVURG00010001726) #28	POLR3H (ENSVURG00010001680) #29	CSDC2 (ENSVURG00010001672) #30	ENSVURG00010001642 #31	DESI1 (ENSVURG00010001632) #32	XRCC6 (ENSVURG00010001619) #33	ENSVURG00010001607	MEI1 (ENSVURG00010001558)
koala	MODERN SPECIES	13	ENSPCIG00000020377	GRAP2 (ENSPCIG00000020373)	FAM83F (ENSPCIG00000020369)	ENSPCIG00000020347	ADSL (ENSPCIG00000020341) #11	SGSM3 (ENSPCIG00000020329) #12	MRTFA (ENSPCIG00000020323) #13	ENSPCIG00000035658	MCHR1 (ENSPCIG00000033822) #14	SLC25A17 (ENSPCIG00000027567) #15	ENSPCIG00000027564 #16	XPNPEP3 (ENSPCIG00000027562) #18	RBX1 (ENSPCIG00000030999) #19	EP300 (ENSPCIG00000026468) #20	ENSPCIG00000036488	L3MBTL2 (ENSPCIG00000026428) #22	ENSPCIG00000026427 #23	ENSPCIG00000036708 #23	RANGAP1 (ENSPCIG00000026423) #24	ZC3H7B (ENSPCIG00000026417) #25	TEF (ENSPCIG00000026531) #26	TOB2 (ENSPCIG00000026533)	PHF5A (ENSPCIG00000031450) #27	ACO2 (ENSPCIG00000026414) #28	POLR3H (ENSPCIG00000026413) #29	CSDC2 (ENSPCIG00000033418) #30	PMM1 (ENSPCIG00000026411) #31	DESI1 (ENSPCIG00000026410) #32	XRCC6 (ENSPCIG00000026409) #33	SNU13 (ENSPCIG00000026408)	ENSPCIG00000026407
Wallaby	MODERN SPECIES	930																L3MBTL2 (ENSMEUG00000004496) #22
Tasmanian devil	MODERN SPECIES	4	CACNA1I (ENSSHAG00000012891)	ENSSHAG00000012062	ENSSHAG00000028037	GRAP2 (ENSSHAG00000028881)	FAM83F (ENSSHAG00000011148)	TNRC6B (ENSSHAG00000009692)	ADSL (ENSSHAG00000009366) #11	SGSM3 (ENSSHAG00000025628) #12	MRTFA (ENSSHAG00000024452) #13	MCHR1 (ENSSHAG00000002986) #14	SLC25A17 (ENSSHAG00000030380) #15	ENSSHAG00000000319 #16	XPNPEP3 (ENSSHAG00000003507) #18	ENSSHAG00000024914 #19	EP300 (ENSSHAG00000006684) #20	L3MBTL2 (ENSSHAG00000025122) #22	ENSSHAG00000007840 #23	ENSSHAG00000008085 #23	RANGAP1 (ENSSHAG00000008179) #24	ZC3H7B (ENSSHAG00000008653) #25	TEF (ENSSHAG00000020958) #26	TOB2 (ENSSHAG00000030650)	PHF5A (ENSSHAG00000025116) #27	ACO2 (ENSSHAG00000010092) #28	POLR3H (ENSSHAG00000010196) #29	CSDC2 (ENSSHAG00000029872) #30	PMM1 (ENSSHAG00000025713) #31	DESI1 (ENSSHAG00000029515) #32	XRCC6 (ENSSHAG00000010790) #33	ENSSHAG00000024404	MEI1 (ENSSHAG00000011079)
Opossum	MODERN SPECIES	7	DNM1L (ENSMODG00000012763)	ENSMODG00000012921	PKP2 (ENSMODG00000012782)	CNTN1 (ENSMODG00000012850)	ENSMODG00000038819	ENSMODG00000012885	ENSMODG00000048400	ADSL (ENSMODG00000012930) #11	ENSMODG00000012937 #13	MCHR1 (ENSMODG00000045226) #14	SLC25A17 (ENSMODG00000013036) #15	ENSMODG00000013042 #16	XPNPEP3 (ENSMODG00000013052) #18	ENSMODG00000013054	EP300 (ENSMODG00000013073) #20	L3MBTL2 (ENSMODG00000013083) #22	ENSMODG00000028924	RANGAP1 (ENSMODG00000013097) #24	NUP50 (ENSMODG00000007116)	ENSMODG00000048389	UPK3A (ENSMODG00000007145)	ENSMODG00000007167	SMC1B (ENSMODG00000007253)	RIBC2 (ENSMODG00000007265)	FBLN1 (ENSMODG00000007284)	ENSMODG00000007304	WNT7B (ENSMODG00000007327)	ENSMODG00000007333	ENSMODG00000024114	PPARA (ENSMODG00000007365)	CDPF1 (ENSMODG00000024113)
Platypus	MODERN SPECIES	5	CACNA1I (ENSOANG00000014664)	ENSOANG00000014666	GRAP2 (ENSOANG00000014667)	ENSOANG00000050214	TNRC6B (ENSOANG00000014668)	ADSL (ENSOANG00000014669) #11	SGSM3 (ENSOANG00000008380) #12	ENSOANG00000013468 ##13	MRTFA (ENSOANG00000044653) #13	MCHR1 (ENSOANG00000014672) #14	SLC25A17 (ENSOANG00000049591) #15	ST13 (ENSOANG00000014676) #16	XPNPEP3 (ENSOANG00000014678) #18	RBX1 (ENSOANG00000014675) #19	EP300 (ENSOANG00000014679) #20	L3MBTL2 (ENSOANG00000013943) #22	CHADL (ENSOANG00000036728) #23	RANGAP1 (ENSOANG00000013941) #24	ZC3H7B (ENSOANG00000008962) #25	TEF (ENSOANG00000011535) #26	ENSOANG00000009031	PHF5A (ENSOANG00000044295) #27	ACO2 (ENSOANG00000003550) #28	POLR3H (ENSOANG00000004374) #29	CSDC2 (ENSOANG00000004309) #30	PMM1 (ENSOANG00000050238) #31	DESI1 (ENSOANG00000044638) #32	XRCC6 (ENSOANG00000011328) #33	SNU13 (ENSOANG00000011327)	MEI1 (ENSOANG00000004117)	ENSOANG00000042179
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Archosauria	ANCESTRAL SPECIES	4	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Aves	ANCESTRAL SPECIES	1	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Neognathae	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Neognathae_c	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Golden eagle	MODERN SPECIES	8	ATF4 (ENSACCG00020012213)	RPS19BP1 (ENSACCG00020012199)	CACNA1I (ENSACCG00020011911)	ENSACCG00020011462	ENSACCG00020011449	FAM83F (ENSACCG00020011437)	TNRC6B (ENSACCG00020011399)	ADSL (ENSACCG00020011368) #11	SGSM3 (ENSACCG00020011355) #12	MRTFA (ENSACCG00020011330) #13	SLC25A17 (ENSACCG00020011303) #15	ST13 (ENSACCG00020011290) #16	XPNPEP3 (ENSACCG00020011272) #18	RBX1 (ENSACCG00020011253) #19	EP300 (ENSACCG00020011223) #20	L3MBTL2 (ENSACCG00020011187) #22	CHADL (ENSACCG00020011167) #23	RANGAP1 (ENSACCG00020011151) #24	ZC3H7B (ENSACCG00020011103) #25	TEF (ENSACCG00020011092) #26	TOB2 (ENSACCG00020011079)	PHF5A (ENSACCG00020011070) #27	ACO2 (ENSACCG00020011045) #28	POLR3H (ENSACCG00020011032) #29	CSDC2 (ENSACCG00020011025) #30	PMM1 (ENSACCG00020010995) #31	DESI1 (ENSACCG00020010985) #32	XRCC6 (ENSACCG00020010932) #33	SNU13 (ENSACCG00020010839)	MEI1 (ENSACCG00020010827)	CCDC134 (ENSACCG00020010797)
Kakapo	MODERN SPECIES	20	CACNA1I (ENSSHBG00005002245)	ENSSHBG00005003047	ENSSHBG00005003070	GRAP2 (ENSSHBG00005003082)	FAM83F (ENSSHBG00005003111)	ENSSHBG00005003140	ENSSHBG00005003174	ADSL (ENSSHBG00005003214) #11	SGSM3 (ENSSHBG00005003400) #12	MRTFA (ENSSHBG00005003736) #13	SLC25A17 (ENSSHBG00005003758) #15	ST13 (ENSSHBG00005003778) #16	XPNPEP3 (ENSSHBG00005003788) #18	RBX1 (ENSSHBG00005003797) #19	EP300 (ENSSHBG00005003877) #20	L3MBTL2 (ENSSHBG00005003962) #22	CHADL (ENSSHBG00005003983) #23	RANGAP1 (ENSSHBG00005003995) #24	ZC3H7B (ENSSHBG00005004011) #25	TEF (ENSSHBG00005004030) #26	TOB2 (ENSSHBG00005004039)	PHF5A (ENSSHBG00005004044) #27	ACO2 (ENSSHBG00005004055) #28	POLR3H (ENSSHBG00005004066) #29	CSDC2 (ENSSHBG00005004072) #30	PMM1 (ENSSHBG00005004080) #31	DESI1 (ENSSHBG00005004088) #32	XRCC6 (ENSSHBG00005004097) #33	SNU13 (ENSSHBG00005004108)	ENSSHBG00005004117	ENSSHBG00005004126
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Great tit	MODERN SPECIES	10	MIEF1 (ENSPMJG00000007725)	ENSPMJG00000007720	ATF4 (ENSPMJG00000007715)	CACNA1I (ENSPMJG00000007671)	GRAP2 (ENSPMJG00000007667)	FAM83F (ENSPMJG00000007663)	TNRC6B (ENSPMJG00000007596)	ADSL (ENSPMJG00000007593) #11	SGSM3 (ENSPMJG00000007584) #12	MRTFA (ENSPMJG00000007562) #13	SLC25A17 (ENSPMJG00000007471) #15	ST13 (ENSPMJG00000007467) #16	XPNPEP3 (ENSPMJG00000007454) #18	RBX1 (ENSPMJG00000007453) #19	EP300 (ENSPMJG00000005447) #20	L3MBTL2 (ENSPMJG00000005319) #22	CHADL (ENSPMJG00000005316) #23	RANGAP1 (ENSPMJG00000004991) #24	ZC3H7B (ENSPMJG00000004469) #25	TEF (ENSPMJG00000004460) #26	TOB2 (ENSPMJG00000004458)	PHF5A (ENSPMJG00000004457) #27	ACO2 (ENSPMJG00000004344) #28	POLR3H (ENSPMJG00000004341) #29	CSDC2 (ENSPMJG00000004340) #30	PMM1 (ENSPMJG00000003708) #31	DESI1 (ENSPMJG00000003706) #32	XRCC6 (ENSPMJG00000003281) #33	SNU13 (ENSPMJG00000003278)	MEI1 (ENSPMJG00000003253)	CCDC134 (ENSPMJG00000003161)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Flycatcher	MODERN SPECIES	10	MIEF1 (ENSFALG00000026637)	ATF4 (ENSFALG00000028026)	ENSFALG00000025172	CACNA1I (ENSFALG00000012255)	GRAP2 (ENSFALG00000027504)	FAM83F (ENSFALG00000012211)	TNRC6B (ENSFALG00000012195)	ADSL (ENSFALG00000012164) #11	SGSM3 (ENSFALG00000012148) #12	MRTFA (ENSFALG00000026521) #13	ENSFALG00000025665	SLC25A17 (ENSFALG00000027046) #15	XPNPEP3 (ENSFALG00000025613) #18	RBX1 (ENSFALG00000012051) #19	EP300 (ENSFALG00000012042) #20	L3MBTL2 (ENSFALG00000012014) #22	CHADL (ENSFALG00000011997) #23	RANGAP1 (ENSFALG00000011980) #24	ZC3H7B (ENSFALG00000011968) #25	TEF (ENSFALG00000011967) #26	TOB2 (ENSFALG00000011965)	PHF5A (ENSFALG00000025716) #27	POLR3H (ENSFALG00000011952) #29	CSDC2 (ENSFALG00000011950) #30	PMM1 (ENSFALG00000029020) #31	ENSFALG00000024026 ##31	ENSFALG00000027725 #32	ENSFALG00000028431 #32	XRCC6 (ENSFALG00000011908) #33	SNU13 (ENSFALG00000028405)	MEI1 (ENSFALG00000011849)
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Medium ground finch	MODERN SPECIES	37	ATF4 (ENSGFOG00000005102)	RPS19BP1 (ENSGFOG00000005104)	ENSGFOG00000005120	GRAP2 (ENSGFOG00000005145)	FAM83F (ENSGFOG00000005221)	TNRC6B (ENSGFOG00000005299)	ENSGFOG00000005347	ADSL (ENSGFOG00000005355) #11	SGSM3 (ENSGFOG00000005382) #12	MRTFA (ENSGFOG00000005485) #13	SLC25A17 (ENSGFOG00000005521) #15	ST13 (ENSGFOG00000005528) #16	XPNPEP3 (ENSGFOG00000005541) #18	RBX1 (ENSGFOG00000005560) #19	EP300 (ENSGFOG00000005659) #20	L3MBTL2 (ENSGFOG00000007896) #22	CHADL (ENSGFOG00000007916) #23	RANGAP1 (ENSGFOG00000007926) #24	ZC3H7B (ENSGFOG00000007942) #25	TEF (ENSGFOG00000007970) #26	TOB2 (ENSGFOG00000007976)	PHF5A (ENSGFOG00000007986) #27	ACO2 (ENSGFOG00000007995) #28	POLR3H (ENSGFOG00000008010) #29	CSDC2 (ENSGFOG00000008013) #30	PMM1 (ENSGFOG00000008019) #31	DESI1 (ENSGFOG00000008027) #32	XRCC6 (ENSGFOG00000008034) #33	SNU13 (ENSGFOG00000008044)	ENSGFOG00000008048	ENSGFOG00000008064
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Zebra finch	MODERN SPECIES	11	MIEF1 (ENSTGUG00000010229)	ATF4 (ENSTGUG00000010225)	RPS19BP1 (ENSTGUG00000010217)	CACNA1I (ENSTGUG00000010198)	GRAP2 (ENSTGUG00000024825)	FAM83F (ENSTGUG00000010169)	TNRC6B (ENSTGUG00000010138)	ADSL (ENSTGUG00000010111) #11	SGSM3 (ENSTGUG00000010093) #12	MRTFA (ENSTGUG00000010083) #13	SLC25A17 (ENSTGUG00000010069) #15	ST13 (ENSTGUG00000010046) #16	XPNPEP3 (ENSTGUG00000010038) #18	RBX1 (ENSTGUG00000010035) #19	EP300 (ENSTGUG00000010016) #20	L3MBTL2 (ENSTGUG00000010000) #22	RANGAP1 (ENSTGUG00000009969) #24	ZC3H7B (ENSTGUG00000009946) #25	TEF (ENSTGUG00000009944) #26	TOB2 (ENSTGUG00000009941)	PHF5A (ENSTGUG00000025618) #27	ACO2 (ENSTGUG00000009907) #28	POLR3H (ENSTGUG00000009901) #29	CSDC2 (ENSTGUG00000019504) #30	PMM1 (ENSTGUG00000009884) #31	DESI1 (ENSTGUG00000023310) #32	XRCC6 (ENSTGUG00000009852) #33	SNU13 (ENSTGUG00000021658)	MEI1 (ENSTGUG00000009814)	CCDC134 (ENSTGUG00000009807)	SREBF2 (ENSTGUG00000009772)
Common canary	MODERN SPECIES	6	ATF4 (ENSSCAG00000005159)	ENSSCAG00000005162	CACNA1I (ENSSCAG00000005203)	GRAP2 (ENSSCAG00000005373)	FAM83F (ENSSCAG00000005376)	TNRC6B (ENSSCAG00000005385)	ENSSCAG00000005401	ADSL (ENSSCAG00000005406) #11	SGSM3 (ENSSCAG00000005414) #12	MRTFA (ENSSCAG00000005424) #13	SLC25A17 (ENSSCAG00000005430) #15	ST13 (ENSSCAG00000005434) #16	XPNPEP3 (ENSSCAG00000005442) #18	RBX1 (ENSSCAG00000005448) #19	EP300 (ENSSCAG00000005456) #20	L3MBTL2 (ENSSCAG00000005464) #22	CHADL (ENSSCAG00000005472) #23	RANGAP1 (ENSSCAG00000005490) #24	ZC3H7B (ENSSCAG00000005561) #25	TEF (ENSSCAG00000005576) #26	TOB2 (ENSSCAG00000005587)	PHF5A (ENSSCAG00000005591) #27	ACO2 (ENSSCAG00000005597) #28	POLR3H (ENSSCAG00000005603) #29	CSDC2 (ENSSCAG00000005611) #30	PMM1 (ENSSCAG00000005616) #31	DESI1 (ENSSCAG00000005622) #32	XRCC6 (ENSSCAG00000005654) #33	SNU13 (ENSSCAG00000005802)	MEI1 (ENSSCAG00000005808)	SREBF2 (ENSSCAG00000005828)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Chicken	MODERN SPECIES		MIEF1 (ENSGALG00010012426)	ATF4 (ENSGALG00010012407)	RPS19BP1 (ENSGALG00010012378)	CACNA1I (ENSGALG00010012410)	GRAP2 (ENSGALG00010013194)	FAM83F (ENSGALG00010013164)	TNRC6B (ENSGALG00010013146)	ADSL (ENSGALG00010013095) #11	SGSM3 (ENSGALG00010013084) #12	MRTFA (ENSGALG00010013053) #13	SLC25A17 (ENSGALG00010012962) #15	ST13P5 (ENSGALG00010012948) #16	XPNPEP3 (ENSGALG00010012910) #18	RBX1 (ENSGALG00010012900) #19	EP300 (ENSGALG00010012865) #20	L3MBTL2 (ENSGALG00010012841) #22	CHADL (ENSGALG00010012832) #23	RANGAP1 (ENSGALG00010012819) #24	ZC3H7B (ENSGALG00010012797) #25	TEF (ENSGALG00010012786) #26	TOB2 (ENSGALG00010012747)	PHF5A (ENSGALG00010012765) #27	ACO2 (ENSGALG00010012720) #28	POLR3H (ENSGALG00010010891) #29	CSDC2 (ENSGALG00010010856) #30	PMM1 (ENSGALG00010010841) #31	DESI1 (ENSGALG00010010831) #32	XRCC6 (ENSGALG00010010792) #33	ENSGALG00010010771	MEI1 (ENSGALG00010010761)	CCDC134 (ENSGALG00010010740)
Turkey	MODERN SPECIES		RPS19BP1 (ENSMGAG00000012407)	CACNA1I (ENSMGAG00000012353)	GRAP2 (ENSMGAG00000012343)	FAM83F (ENSMGAG00000012348)	ENSMGAG00000012333	ENSMGAG00000021539	ADSL (ENSMGAG00000012313) #11	SGSM3 (ENSMGAG00000012289) #12	MRTFA (ENSMGAG00000012307) #13	ENSMGAG00000016396	SLC25A17 (ENSMGAG00000012312) #15	ST13 (ENSMGAG00000012265) #16	XPNPEP3 (ENSMGAG00000012279) #18	RBX1 (ENSMGAG00000012285) #19	EP300 (ENSMGAG00000012170) #20	L3MBTL2 (ENSMGAG00000012189) #22	CHADL (ENSMGAG00000012213) #23	RANGAP1 (ENSMGAG00000012215) #24	ZC3H7B (ENSMGAG00000012234) #25	TEF (ENSMGAG00000012262) #26	TOB2 (ENSMGAG00000015716)	PHF5A (ENSMGAG00000012169) #27	POLR3H (ENSMGAG00000012126) #29	CSDC2 (ENSMGAG00000012131) #30	ENSMGAG00000012110 #28	PMM1 (ENSMGAG00000012134) #31	DESI1 (ENSMGAG00000012139) #32	XRCC6 (ENSMGAG00000012146) #33	SNU13 (ENSMGAG00000012155)	MEI1 (ENSMGAG00000012159)	CCDC134 (ENSMGAG00000012164)
Japanese quail	MODERN SPECIES		ATF4 (ENSCJPG00005013316)	RPS19BP1 (ENSCJPG00005013315)	CACNA1I (ENSCJPG00005010236)	GRAP2 (ENSCJPG00005010214)	FAM83F (ENSCJPG00005010213)	TNRC6B (ENSCJPG00005010212)	ADSL (ENSCJPG00005009384) #11	SGSM3 (ENSCJPG00005009373) #12	MRTFA (ENSCJPG00005009371) #13	ENSCJPG00005009364 #15	ENSCJPG00005009360 #15	ST13 (ENSCJPG00005009358) #16	XPNPEP3 (ENSCJPG00005009357) #18	RBX1 (ENSCJPG00005009355) #19	EP300 (ENSCJPG00005009352) #20	L3MBTL2 (ENSCJPG00005009248) #22	ENSCJPG00005009247	RANGAP1 (ENSCJPG00005009109) #24	ZC3H7B (ENSCJPG00005009108) #25	TEF (ENSCJPG00005009107) #26	TOB2 (ENSCJPG00005009106)	PHF5A (ENSCJPG00005009105) #27	ACO2 (ENSCJPG00005009104) #28	POLR3H (ENSCJPG00005009103) #29	CSDC2 (ENSCJPG00005009102) #30	ENSCJPG00005009101 ##31	DESI1 (ENSCJPG00005009100) #32	XRCC6 (ENSCJPG00005009099) #33	SNU13 (ENSCJPG00005009098)	MEI1 (ENSCJPG00005009097)	CCDC134 (ENSCJPG00005009096)
Anatidae	ANCESTRAL SPECIES	8	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22
Pink-footed goose	MODERN SPECIES	58	MIEF1 (ENSABRG00000016647)	ATF4 (ENSABRG00000016646)	RPS19BP1 (ENSABRG00000016643)	CACNA1I (ENSABRG00000016632)	GRAP2 (ENSABRG00000016616)	FAM83F (ENSABRG00000016603)	TNRC6B (ENSABRG00000016563)	ADSL (ENSABRG00000016444) #11	SGSM3 (ENSABRG00000016393) #12	MRTFA (ENSABRG00000016352) #13	SLC25A17 (ENSABRG00000016324) #15	ST13 (ENSABRG00000016245) #16	XPNPEP3 (ENSABRG00000016221) #18	RBX1 (ENSABRG00000016215) #19	EP300 (ENSABRG00000016186) #20	L3MBTL2 (ENSABRG00000016104) #22
Duck	MODERN SPECIES		ATF4 (ENSAPLG00000001773)	RPS19BP1 (ENSAPLG00000015585)	ENSAPLG00000017412	CACNA1I (ENSAPLG00000009947)	GRAP2 (ENSAPLG00000009697)	FAM83F (ENSAPLG00000009665)	TNRC6B (ENSAPLG00000009347)	ADSL (ENSAPLG00000008986) #11	SGSM3 (ENSAPLG00000014613) #12	MRTFA (ENSAPLG00000014434) #13	SLC25A17 (ENSAPLG00000009624) #15	ST13 (ENSAPLG00000009644) #16	XPNPEP3 (ENSAPLG00000010243) #18	RBX1 (ENSAPLG00000010445) #19	EP300 (ENSAPLG00000010504) #20	L3MBTL2 (ENSAPLG00000003563) #22	ACSS3 (ENSAPLG00000006860)	ENSAPLG00000016884	PPFIA2 (ENSAPLG00000005353)	CCDC59 (ENSAPLG00000007839)	METTL25 (ENSAPLG00000007999)	TMTC2 (ENSAPLG00000013866)	ENSAPLG00000018511	SLC6A15 (ENSAPLG00000015250)	TSPAN19 (ENSAPLG00000021214)	ENSAPLG00000000574	ALX1 (ENSAPLG00000001231)	RASSF9 (ENSAPLG00000001547)	NTS (ENSAPLG00000018978)	MGAT4C (ENSAPLG00000002108)	ENSAPLG00000024557
African ostrich	MODERN SPECIES	282	MIEF1 (ENSSCUG00000000711)	ATF4 (ENSSCUG00000000713)	RPS19BP1 (ENSSCUG00000000714)	CACNA1I (ENSSCUG00000000784)	GRAP2 (ENSSCUG00000000841)	FAM83F (ENSSCUG00000000847)	TNRC6B (ENSSCUG00000000852)	ADSL (ENSSCUG00000000862) #11	SGSM3 (ENSSCUG00000000867) #12	MRTFA (ENSSCUG00000000871) #13	SLC25A17 (ENSSCUG00000000874) #15	ENSSCUG00000000875 #16	XPNPEP3 (ENSSCUG00000000876) #18	RBX1 (ENSSCUG00000000878) #19	EP300 (ENSSCUG00000000881) #20	L3MBTL2 (ENSSCUG00000000883) #22	CHADL (ENSSCUG00000000887) #23	RANGAP1 (ENSSCUG00000000888) #24	ZC3H7B (ENSSCUG00000000894) #25	TEF (ENSSCUG00000000897) #26	TOB2 (ENSSCUG00000000898)	PHF5A (ENSSCUG00000000899) #27	ACO2 (ENSSCUG00000000901) #28	POLR3H (ENSSCUG00000000902) #29	PMM1 (ENSSCUG00000000905) #31	DESI1 (ENSSCUG00000000906) #32	MEI1 (ENSSCUG00000000908)	SNU13 (ENSSCUG00000000916)	CCDC134 (ENSSCUG00000000917)	SREBF2 (ENSSCUG00000000927)	TNFRSF13C (ENSSCUG00000000930)
Australian saltwater crocodile	MODERN SPECIES	49	RPS19BP1 (ENSCPRG00005019038)	CACNA1I (ENSCPRG00005019040)	ENSCPRG00005019042	GRAP2 (ENSCPRG00005019044)	FAM83F (ENSCPRG00005019045)	TNRC6B (ENSCPRG00005019047)	ADSL (ENSCPRG00005019048) #11	SGSM3 (ENSCPRG00005019049) #12	MRTFA (ENSCPRG00005019050) #13	MCHR1 (ENSCPRG00005019051) #14	SLC25A17 (ENSCPRG00005019052) #15	ENSCPRG00005019053 #16	XPNPEP3 (ENSCPRG00005019054) #18	RBX1 (ENSCPRG00005019056) #19	EP300 (ENSCPRG00005019057) #20	L3MBTL2 (ENSCPRG00005019058) #22	CHADL (ENSCPRG00005019059) #23	ENSCPRG00005019060	RANGAP1 (ENSCPRG00005019061) #24	ZC3H7B (ENSCPRG00005019062) #25	TEF (ENSCPRG00005019063) #26	TOB2 (ENSCPRG00005019065)	PHF5A (ENSCPRG00005019066) #27	ACO2 (ENSCPRG00005019067) #28	POLR3H (ENSCPRG00005019068) #29	CSDC2 (ENSCPRG00005019069) #30	PMM1 (ENSCPRG00005019070) #31	DESI1 (ENSCPRG00005019071) #32	ENSCPRG00005019072	XRCC6 (ENSCPRG00005019073) #33	ENSCPRG00005019074
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Emydidae	ANCESTRAL SPECIES	5	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Three-toed box turtle	MODERN SPECIES	118	RPS19BP1 (ENSTMTG00000005007)	CACNA1I (ENSTMTG00000004892)	ENSTMTG00000004866	GRAP2 (ENSTMTG00000004819)	FAM83F (ENSTMTG00000004780)	TNRC6B (ENSTMTG00000004079)	ADSL (ENSTMTG00000003987) #11	SGSM3 (ENSTMTG00000003933) #12	MRTFA (ENSTMTG00000003895) #13	MCHR1 (ENSTMTG00000003871) #14	SLC25A17 (ENSTMTG00000003852) #15	ENSTMTG00000003825 #16	XPNPEP3 (ENSTMTG00000003795) #18	RBX1 (ENSTMTG00000003773) #19	EP300 (ENSTMTG00000003703) #20	L3MBTL2 (ENSTMTG00000003620) #22	CHADL (ENSTMTG00000003593) #23	ENSTMTG00000003576	RANGAP1 (ENSTMTG00000003408) #24	ZC3H7B (ENSTMTG00000003337) #25	ENSTMTG00000003315	TEF (ENSTMTG00000003303) #26	TOB2 (ENSTMTG00000003292)	PHF5A (ENSTMTG00000003280) #27	ACO2 (ENSTMTG00000003259) #28	POLR3H (ENSTMTG00000003249) #29	CSDC2 (ENSTMTG00000008503) #30	PMM1 (ENSTMTG00000008492) #31	DESI1 (ENSTMTG00000008481) #32	XRCC6 (ENSTMTG00000008458) #33	SNU13 (ENSTMTG00000008448)
painted turtle	MODERN SPECIES	2381	CACNA1I (ENSCPBG00000022952)	ENSCPBG00000022949	GRAP2 (ENSCPBG00000022944)	FAM83F (ENSCPBG00000022941)	ENSCPBG00000022940	TNRC6B (ENSCPBG00000022932)	ADSL (ENSCPBG00000022923) #11	SGSM3 (ENSCPBG00000022918) #12	MCHR1 (ENSCPBG00000022916) #14	MRTFA (ENSCPBG00000022902) #13	ENSCPBG00000022896 #16	XPNPEP3 (ENSCPBG00000022890) #18	RBX1 (ENSCPBG00000022886) #19	EP300 (ENSCPBG00000021241) #20	CHADL (ENSCPBG00000021171) #23	L3MBTL2 (ENSCPBG00000021168) #22	ENSCPBG00000021162	RANGAP1 (ENSCPBG00000020589) #24	ZC3H7B (ENSCPBG00000020560) #25	TEF (ENSCPBG00000020555) #26	PHF5A (ENSCPBG00000020547) #27	ACO2 (ENSCPBG00000020545) #28	POLR3H (ENSCPBG00000020544) #29	PMM1 (ENSCPBG00000020543) #31	CSDC2 (ENSCPBG00000020542) #30	DESI1 (ENSCPBG00000020538) #32	XRCC6 (ENSCPBG00000020535) #33	SNU13 (ENSCPBG00000020533)	CCDC134 (ENSCPBG00000020531)	SREBF2 (ENSCPBG00000020529)	ENSCPBG00000020528
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077
Abingdon island giant tortoise	MODERN SPECIES	88	CACNA1I (ENSCABG00000022965)	ENSCABG00000022964	GRAP2 (ENSCABG00000022963)	FAM83F (ENSCABG00000022961)	TNRC6B (ENSCABG00000022960)	ADSL (ENSCABG00000022959) #11	ENSCABG00000022958	SGSM3 (ENSCABG00000022956) #12	ENSCABG00000022955 #13	ENSCABG00000022954 #13	SLC25A17 (ENSCABG00000022953) #15	ENSCABG00000022946 #16	XPNPEP3 (ENSCABG00000022941) #18	RBX1 (ENSCABG00000022939) #19	EP300 (ENSCABG00000022920) #20	L3MBTL2 (ENSCABG00000022907) #22	CHADL (ENSCABG00000022905) #23	ENSCABG00000022903	RANGAP1 (ENSCABG00000022902) #24	ZC3H7B (ENSCABG00000022901) #25	TEF (ENSCABG00000022900) #26	TOB2 (ENSCABG00000022899)	PHF5A (ENSCABG00000022898) #27	ACO2 (ENSCABG00000022897) #28	POLR3H (ENSCABG00000022894) #29	CSDC2 (ENSCABG00000022893) #30	PMM1 (ENSCABG00000022891) #31	DESI1 (ENSCABG00000022890) #32	XRCC6 (ENSCABG00000022888) #33	SNU13 (ENSCABG00000022883)	ENSCABG00000022882
Goode s thornscrub tortoise	MODERN SPECIES		ATF4 (ENSGEVG00005001614)	RPS19BP1 (ENSGEVG00005001626)	CACNA1I (ENSGEVG00005001697)	ENSGEVG00005001812	GRAP2 (ENSGEVG00005001821)	FAM83F (ENSGEVG00005001832)	TNRC6B (ENSGEVG00005001864)	ADSL (ENSGEVG00005001950) #11	SGSM3 (ENSGEVG00005001983) #12	MRTFA (ENSGEVG00005002013) #13	SLC25A17 (ENSGEVG00005002031) #15	ENSGEVG00005002059 #16	XPNPEP3 (ENSGEVG00005002096) #18	RBX1 (ENSGEVG00005002125) #19	EP300 (ENSGEVG00005002140) #20	L3MBTL2 (ENSGEVG00005002180) #22	CHADL (ENSGEVG00005002219) #23	ENSGEVG00005002229	RANGAP1 (ENSGEVG00005002246) #24	ZC3H7B (ENSGEVG00005002265) #25	TEF (ENSGEVG00005002306) #26	ENSGEVG00005002321	TOB2 (ENSGEVG00005002327)	PHF5A (ENSGEVG00005002334) #27	ACO2 (ENSGEVG00005002343) #28	POLR3H (ENSGEVG00005002371) #29	CSDC2 (ENSGEVG00005002384) #30	PMM1 (ENSGEVG00005002400) #31	XRCC6 (ENSGEVG00005002426) #33	DESI1 (ENSGEVG00005002450) #32	SNU13 (ENSGEVG00005000024)
Chinese turtle	MODERN SPECIES	1164				ENSPSIG00000004436	THBS1 (ENSPSIG00000004513)	ENSPSIG00000001693	TNRC6B (ENSPSIG00000005318)	ADSL (ENSPSIG00000005445) #11	SGSM3 (ENSPSIG00000006114) #12	MRTFA (ENSPSIG00000007042) #13	SLC25A17 (ENSPSIG00000004546) #15	ENSPSIG00000004553 #16	XPNPEP3 (ENSPSIG00000004711) #18	RBX1 (ENSPSIG00000004730) #19	EP300 (ENSPSIG00000004772) #20	L3MBTL2 (ENSPSIG00000005049) #22	CHADL (ENSPSIG00000005321) #23	ENSPSIG00000005447	RANGAP1 (ENSPSIG00000005458) #24	ZC3H7B (ENSPSIG00000005743) #25	TEF (ENSPSIG00000006835) #26	TOB2 (ENSPSIG00000007002)	PHF5A (ENSPSIG00000007014) #27	ACO2 (ENSPSIG00000007077) #28	POLR3H (ENSPSIG00000008284) #29	CSDC2 (ENSPSIG00000008362) #30	PMM1 (ENSPSIG00000008638) #31	DESI1 (ENSPSIG00000008686) #32	ENSPSIG00000008759 #33
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339
Laterata	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307.f	ENSGT00940000157307.e	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	1	CACNA1I (ENSPMRG00000021848)	ENTHD1 (ENSPMRG00000021657)	GRAP2 (ENSPMRG00000021650)	ENSPMRG00000021649	FAM83F (ENSPMRG00000021645)	TNRC6B (ENSPMRG00000021642)	ADSL (ENSPMRG00000021633) #11	SGSM3 (ENSPMRG00000021604) #12	MRTFA (ENSPMRG00000021490) #13	ENSPMRG00000021454	SLC25A17 (ENSPMRG00000021442) #15	ENSPMRG00000021430 #16	XPNPEP3 (ENSPMRG00000021424) #18	RBX1 (ENSPMRG00000021419) #19	EP300 (ENSPMRG00000021378) #20	ENSPMRG00000020965 #22	CHADL (ENSPMRG00000020900) #23	ENSPMRG00000020893	RANGAP1 (ENSPMRG00000020887) #24	ZC3H7B (ENSPMRG00000020871) #25	TEF (ENSPMRG00000020863) #26	TOB2 (ENSPMRG00000020859)	PHF5A (ENSPMRG00000020857) #27	ACO2 (ENSPMRG00000020422) #28	CSDC2 (ENSPMRG00000020362) #30	PMM1 (ENSPMRG00000020353) #31	DESI1 (ENSPMRG00000020343) #32	XRCC6 (ENSPMRG00000020330) #33	SNU13 (ENSPMRG00000020324)	MEI1 (ENSPMRG00000020311)	CCDC134 (ENSPMRG00000020301)
Common wall lizard	MODERN SPECIES	326																ENSPMRG00000019338 #22
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000015587	ENSSMRG00000015586	ENSSMRG00000015585	ENSSMRG00000015584	ENSSMRG00000015583	FAM83F (ENSSMRG00000015582)	TNRC6B (ENSSMRG00000015580)	ADSL (ENSSMRG00000015579) #11	SGSM3 (ENSSMRG00000015577) #12	MRTFA (ENSSMRG00000015576) #13	SLC25A17 (ENSSMRG00000015575) #15	ENSSMRG00000015574 #16	XPNPEP3 (ENSSMRG00000015573) #18	RBX1 (ENSSMRG00000015572) #19	EP300 (ENSSMRG00000015570) #20	L3MBTL2 (ENSSMRG00000015569) #22	CHADL (ENSSMRG00000015568) #23	ENSSMRG00000015566	RANGAP1 (ENSSMRG00000015363) #24	ZC3H7B (ENSSMRG00000015357) #25	TEF (ENSSMRG00000015355) #26	TOB2 (ENSSMRG00000015352)	PHF5A (ENSSMRG00000015351) #27	ACO2 (ENSSMRG00000015350) #28	CSDC2 (ENSSMRG00000015349) #30	PMM1 (ENSSMRG00000015348) #31	DESI1 (ENSSMRG00000015347) #32	XRCC6 (ENSSMRG00000014777) #33	ENSSMRG00000014776	ENSSMRG00000014775	CCDC134 (ENSSMRG00000014772)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339
Elapidae	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339.a
Indian cobra	MODERN SPECIES	6	ATF4 (ENSNNAG00000005776)	RPS19BP1 (ENSNNAG00000005761)	CACNA1I (ENSNNAG00000005643)	ENSNNAG00000005619	GRAP2 (ENSNNAG00000005604)	FAM83F (ENSNNAG00000005582)	TNRC6B (ENSNNAG00000005431)	SGSM3 (ENSNNAG00000004902) #12	ENSNNAG00000004858 ##13	MRTFA (ENSNNAG00000004822) #13	SLC25A17 (ENSNNAG00000004807) #15	ENSNNAG00000004788 #16	XPNPEP3 (ENSNNAG00000004765) #18	RBX1 (ENSNNAG00000004745) #19	EP300 (ENSNNAG00000004664) #20	L3MBTL2 (ENSNNAG00000004623) #22	ENSNNAG00000004605 #24	ENSNNAG00000004583 #24	ZC3H7B (ENSNNAG00000004566) #25	TEF (ENSNNAG00000004545) #26	TOB2 (ENSNNAG00000004539)	PHF5A (ENSNNAG00000004530) #27	ACO2 (ENSNNAG00000004487) #28	CSDC2 (ENSNNAG00000004467) #30	PMM1 (ENSNNAG00000004428) #31	DESI1 (ENSNNAG00000004395) #32	XRCC6 (ENSNNAG00000004359) #33	SNU13 (ENSNNAG00000004338)	ENSNNAG00000004288	CCDC134 (ENSNNAG00000004264)	SREBF2 (ENSNNAG00000003397)
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339.a
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730	ENSGT00940000157307	ENSGT00940000160998.a	ENSGT00940000155813	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00730000111100 #32	ENSGT00940000153239.B #33	ENSGT00550000074840	ENSGT00390000002077	ENSGT00390000020164	ENSGT00940000157339.a
Mainland tiger snake	MODERN SPECIES	6	RPS19BP1 (ENSNSUG00000004877)	CACNA1I (ENSNSUG00000004870)	ENSNSUG00000004869	GRAP2 (ENSNSUG00000004866)	FAM83F (ENSNSUG00000004863)	TNRC6B (ENSNSUG00000004407)	ADSL (ENSNSUG00000004394) #11	SGSM3 (ENSNSUG00000004382) #12	ENSNSUG00000004379 #13	ENSNSUG00000004377 #13	SLC25A17 (ENSNSUG00000004369) #15	ENSNSUG00000004350	XPNPEP3 (ENSNSUG00000004342) #18	RBX1 (ENSNSUG00000004338) #19	EP300 (ENSNSUG00000004324) #20	L3MBTL2 (ENSNSUG00000004288) #22	RANGAP1 (ENSNSUG00000003774) #24	ZC3H7B (ENSNSUG00000003755) #25	TEF (ENSNSUG00000003754) #26	TOB2 (ENSNSUG00000003753)	PHF5A (ENSNSUG00000003750) #27	ACO2 (ENSNSUG00000003747) #28	CSDC2 (ENSNSUG00000003745) #30	PMM1 (ENSNSUG00000003714) #31	DESI1 (ENSNSUG00000003709) #32	XRCC6 (ENSNSUG00000003704) #33	SNU13 (ENSNSUG00000003702)	ENSNSUG00000003697	CCDC134 (ENSNSUG00000003692)	SREBF2 (ENSNSUG00000003621)	ENSNSUG00000003617
Eastern brown snake	MODERN SPECIES		ATF4 (ENSPTXG00000001354)	RPS19BP1 (ENSPTXG00000001356)	CACNA1I (ENSPTXG00000001364)	ENSPTXG00000001373	GRAP2 (ENSPTXG00000001380)	FAM83F (ENSPTXG00000001386)	TNRC6B (ENSPTXG00000001407)	ADSL (ENSPTXG00000001437) #11	SGSM3 (ENSPTXG00000001446) #12	MRTFA (ENSPTXG00000001572) #13	SLC25A17 (ENSPTXG00000001574) #15	ENSPTXG00000001579 #16	XPNPEP3 (ENSPTXG00000001583) #18	RBX1 (ENSPTXG00000001586) #19	EP300 (ENSPTXG00000001636) #20	L3MBTL2 (ENSPTXG00000001671) #22	CHADL (ENSPTXG00000001681) #23	RANGAP1 (ENSPTXG00000001684) #24	ZC3H7B (ENSPTXG00000001686) #25	ENSPTXG00000001688	TEF (ENSPTXG00000001690) #26	TOB2 (ENSPTXG00000001691)	PHF5A (ENSPTXG00000001692) #27	ACO2 (ENSPTXG00000001693) #28	CSDC2 (ENSPTXG00000001696) #30	PMM1 (ENSPTXG00000000011) #31	DESI1 (ENSPTXG00000000015) #32	XRCC6 (ENSPTXG00000000018) #33	SNU13 (ENSPTXG00000000028)	ENSPTXG00000000049	CCDC134 (ENSPTXG00000000073)
Blue-lipped sea krait	MODERN SPECIES	4740																L3MBTL2 (ENSLLTG00000018085) #22
Lizard	MODERN SPECIES	4	RPS19BP1 (ENSACAG00000007571)	CACNA1I (ENSACAG00000007474)	ENSACAG00000041503	ENSACAG00000007459	GRAP2 (ENSACAG00000007407)	FAM83F (ENSACAG00000007387)	TNRC6B (ENSACAG00000007281)	ADSL (ENSACAG00000007206) #11	SGSM3 (ENSACAG00000005430) #12	MRTFA (ENSACAG00000005348) #13	SLC25A17 (ENSACAG00000005318) #15	ENSACAG00000005227 #16	XPNPEP3 (ENSACAG00000005215) #18	RBX1 (ENSACAG00000005208) #19	EP300 (ENSACAG00000005148) #20	L3MBTL2 (ENSACAG00000005056) #22	ENSACAG00000027273	RANGAP1 (ENSACAG00000004943) #24	ZC3H7B (ENSACAG00000004820) #25	TEF (ENSACAG00000004810) #26	TOB2 (ENSACAG00000004782)	PHF5A (ENSACAG00000004775) #27	ACO2 (ENSACAG00000004677) #28	CSDC2 (ENSACAG00000042839) #30	PMM1 (ENSACAG00000004619) #31	DESI1 (ENSACAG00000004597) #32	XRCC6 (ENSACAG00000004508) #33	SNU13 (ENSACAG00000037043)	ENSACAG00000004476	CCDC134 (ENSACAG00000004397)	SREBF2 (ENSACAG00000004146)
tuatara	MODERN SPECIES	1295		INHBA (ENSSPUG00000010721)	GRAP2 (ENSSPUG00000010737)	FAM83F (ENSSPUG00000010758)	TNRC6B (ENSSPUG00000010801)	ADSL (ENSSPUG00000010886) #11	SGSM3 (ENSSPUG00000010979) #12	ENSSPUG00000011001 #13	ENSSPUG00000011074 #13	MCHR1 (ENSSPUG00000011088) #14	SLC25A17 (ENSSPUG00000011136) #15	ENSSPUG00000011346 #16	XPNPEP3 (ENSSPUG00000011362) #18	RBX1 (ENSSPUG00000011379) #19	EP300 (ENSSPUG00000011389) #20	L3MBTL2 (ENSSPUG00000011413) #22	CHADL (ENSSPUG00000011437) #23	RANGAP1 (ENSSPUG00000011454) #24	ZC3H7B (ENSSPUG00000011490) #25	TEF (ENSSPUG00000011581) #26	PHF5A (ENSSPUG00000011593) #27	ACO2 (ENSSPUG00000011600) #28	POLR3H (ENSSPUG00000011619) #29	CSDC2 (ENSSPUG00000011628) #30	PMM1 (ENSSPUG00000011697) #31	ENSSPUG00000012027	DESI1 (ENSSPUG00000012040) #32	XRCC6 (ENSSPUG00000012086) #33	SNU13 (ENSSPUG00000012098)	ENSSPUG00000012111
Anura	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b #22
Frog	MODERN SPECIES	4	rgs13 (ENSXETG00000036070)	rgs1 (ENSXETG00000005674)	ENSXETG00000045757	rgs21 (ENSXETG00000035089)	rgs18 (ENSXETG00000026662)	ENSXETG00000042835	ENSXETG00000048626	ENSXETG00000046795	brinp3 (ENSXETG00000022986)	ENSXETG00000042627	apold1 (ENSXETG00000048852)	ddx47 (ENSXETG00000022984)	gprc5a (ENSXETG00000022983)	hebp1 (ENSXETG00000027311)	chadl (ENSXETG00000022982)	l3mbtl2 (ENSXETG00000022981) #22	ENSXETG00000042501	rbx1 (ENSXETG00000035313) #19	ep300 (ENSXETG00000022974) #20	xpnpep3 (ENSXETG00000022973) #18	fhit (ENSXETG00000022969)	st13 (ENSXETG00000022971) #16	mrtfa (ENSXETG00000022963) #13	ENSXETG00000032012	cenpm (ENSXETG00000027331)	ENSXETG00000036884	septin3 (ENSXETG00000049180)	pheta2 (ENSXETG00000000260)	smdt1 (ENSXETG00000027338)	ndufa6 (ENSXETG00000000256)	mcm5 (ENSXETG00000000253)
Coelacanth	MODERN SPECIES	2413															ENSLACG00000008149 #20	L3MBTL2 (ENSLACG00000007201) #22	IFT27 (ENSLACG00000006563)	RPL3 (ENSLACG00000006276)	SYNGR1 (ENSLACG00000005709)	ENSLACG00000004576	CBX7 (ENSLACG00000003710)	ENSLACG00000002657	CBX6 (ENSLACG00000001171)
Actinopterygii	ANCESTRAL SPECIES	269												ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00390000018518 #27	ENSGT00940000154892 #28	ENSGT00390000004383 #29	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31
Neopterygii	ANCESTRAL SPECIES	121							ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365	ENSGT00940000155497.a.a #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d	ENSGT00940000154892.m.a #28	ENSGT00390000004383 #29	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b #30	ENSGT00390000002918.a.b #31	ENSGT00940000155955.C	ENSGT00530000063509.A	ENSGT00950000183040.B	ENSGT00940000155025.A	ENSGT00940000163472
Osteoglossocephalai	ANCESTRAL SPECIES	47	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129 #15	ENSGT00950000182979.a.a.a.a ##13	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a #32	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.a #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00440000039203.j #24	ENSGT00390000018542.a.b #25	ENSGT00940000156578.a.a #26	ENSGT00940000154208.d	ENSGT00940000154892.m.a #28	ENSGT00390000004383 #29	ENSGT00390000000022.b.a.a #30	ENSGT00390000002918.a.b #31
Osteoglossiformes	ANCESTRAL SPECIES	64							ENSGT00920000149129 #15	ENSGT00950000182979.a.a.a.a ##13	ENSGT00940000163663.A.a	ENSGT00390000009228.b	ENSGT00940000158365.f.b	ENSGT00940000155497.a.a.k #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000153840.a.b #22	ENSGT00940000165277.c	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000154208.d.m	ENSGT00390000004383 #29	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.a	ENSGT01030000235186	ENSGT00530000063509.A.g	ENSGT00950000183040.B	ENSGT00940000155025.A	ENSGT00940000163472	ENSGT00940000158369.a.b	ENSGT00940000160068.a.a	ENSGT00940000157763
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	12	pla2g6 (ENSSFOG00015004646)	ENSSFOG00015028604	cbx6a (ENSSFOG00015032962)	nptxrb (ENSSFOG00015025949)	dnal4b (ENSSFOG00015004593)	mrtfab (ENSSFOG00015004553) ##13	ENSSFOG00015004534	desi1a (ENSSFOG00015029550) #32	l3mbtl2 (ENSSFOG00015030235) #22	ENSSFOG00015014021 #19	xrcc6 (ENSSFOG00015014409) #33	ENSSFOG00015030505	EP300 (ENSSFOG00015014129) #20	st13 (ENSSFOG00015014040) #16	ENSSFOG00015024363 #19	l3mbtl2 (ENSSFOG00015029446) #22	chadlb (ENSSFOG00015013966)	rangap1b (ENSSFOG00015013842) #24	tefa (ENSSFOG00015023219) #26	phf5a (ENSSFOG00015013765) #27	aco2 (ENSSFOG00015013704) #28	CSDC2 (ENSSFOG00015011532) #30	PMM1 (ENSSFOG00015013657) #31	GUCY2C (ENSSFOG00015013494)	ENSSFOG00015026157	PLBD1 (ENSSFOG00015013345)	cby1 (ENSSFOG00015030699)	slc16a8 (ENSSFOG00015013299)	pdap1a (ENSSFOG00015013279)	SH3BP1 (ENSSFOG00015013246)	ENSSFOG00015030985
Asian bonytongue	MODERN SPECIES	12	GUCY2C (ENSSFOG00015013494)	PMM1 (ENSSFOG00015013657) #31	CSDC2 (ENSSFOG00015011532) #30	aco2 (ENSSFOG00015013704) #28	phf5a (ENSSFOG00015013765) #27	tefa (ENSSFOG00015023219) #26	rangap1b (ENSSFOG00015013842) #24	chadlb (ENSSFOG00015013966)	l3mbtl2 (ENSSFOG00015029446) #22	ENSSFOG00015024363 #19	st13 (ENSSFOG00015014040) #16	EP300 (ENSSFOG00015014129) #20	ENSSFOG00015030505	xrcc6 (ENSSFOG00015014409) #33	ENSSFOG00015014021 #19	l3mbtl2 (ENSSFOG00015030235) #22	desi1a (ENSSFOG00015029550) #32	ENSSFOG00015004534	mrtfab (ENSSFOG00015004553) ##13	dnal4b (ENSSFOG00015004593)	nptxrb (ENSSFOG00015025949)	cbx6a (ENSSFOG00015032962)	ENSSFOG00015028604	pla2g6 (ENSSFOG00015004646)	pvalb6 (ENSSFOG00015026993)	ncf4 (ENSSFOG00015004718)	ENSSFOG00015023734	ENSSFOG00015032503	ENSSFOG00015023744	ENSSFOG00015023749	ENSSFOG00015023753
P. kingsleyae	MODERN SPECIES	141	baiap2l2b (ENSPKIG00000004259)	pla2g6 (ENSPKIG00000004189)	CBX6 (ENSPKIG00000004143)	nptxrb (ENSPKIG00000004121)	dnal4b (ENSPKIG00000004101)	si:ch1073-357b18.4 (ENSPKIG00000004077)	mrtfab (ENSPKIG00000004053) ##13	ENSPKIG00000004031	desi1a (ENSPKIG00000004018) #32	xrcc6 (ENSPKIG00000003974) #33	ENSPKIG00000003942	EP300 (ENSPKIG00000003816) #20	xpnpep3 (ENSPKIG00000003746) #18	st13 (ENSPKIG00000003681) #16	ENSPKIG00000003639 #19	l3mbtl2 (ENSPKIG00000003503) #22	chadlb (ENSPKIG00000003436)	rangap1b (ENSPKIG00000003343) #24	ENSPKIG00000003296	ZC3H7B (ENSPKIG00000003219) #25	tefa (ENSPKIG00000003161) #26	TOB2 (ENSPKIG00000003127)	phf5a (ENSPKIG00000003100) #27	aco2 (ENSPKIG00000003055) #28	CSDC2 (ENSPKIG00000003033) #30	PMM1 (ENSPKIG00000003003) #31	ENSPKIG00000002915	ENSPKIG00000002853	cby1 (ENSPKIG00000002813)	pdap1a (ENSPKIG00000002773)	ENSPKIG00000002746
Clupeocephala	ANCESTRAL SPECIES	83										ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	45								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00390000013648	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b	ENSGT00390000018570.a.a.a	ENSGT00390000016123	ENSGT00940000157839	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00940000155813.i.b
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	147									ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b.c #22
Salmo	ANCESTRAL SPECIES	23	ENSGT01100000263556.b.a.b	ENSGT01100000263491.a.b.a.a.b.b.a	ENSGT00400000022326.b.a.b.a.b.a.a.a	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES		ENSSSAG00000116752	ENSSSAG00000001538	ENSSSAG00000092741	CDR2 (ENSSSAG00000088344)	ENSSSAG00000001561	ENSSSAG00000088707	eef2k (ENSSSAG00000001615)	ENSSSAG00000001654 ##13	ENSSSAG00000091473	desi1b (ENSSSAG00000090604) #32	xrcc6 (ENSSSAG00000001692) #33	ENSSSAG00000105775	josd1 (ENSSSAG00000115290)	ENSSSAG00000118777	ENSSSAG00000001794 #20	l3mbtl2 (ENSSSAG00000001922) #22	chadlb (ENSSSAG00000002125)	rangap1b (ENSSSAG00000002137) #24	ZC3H7B (ENSSSAG00000002171) #25	tef (ENSSSAG00000002242) #26	PHF5A (ENSSSAG00000002272) #27	aco2 (ENSSSAG00000002315) #28	csdc2a (ENSSSAG00000002399) #30	ENSSSAG00000002491	ENSSSAG00000002780	ENSSSAG00000002830	cby1 (ENSSSAG00000116184)	HAP28 (ENSSSAG00000003264)	ENSSSAG00000003294	ENSSSAG00000121794	ENSSSAG00000099860
Atlantic salmon	MODERN SPECIES																	ENSSSAG00000095985 #22	ENSSSAG00000088399	ENSSSAG00000103107	ENSSSAG00000000063	ube2d3 (ENSSSAG00000110109)	ENSSSAG00000000049	ENSSSAG00000101513	ENSSSAG00000109226	ENSSSAG00000112437	ENSSSAG00000000051	ENSSSAG00000000052	ENSSSAG00000098245	ENSSSAG00000000057	ENSSSAG00000083486	ENSSSAG00000098639	noto (ENSSSAG00000000055)
River trout	MODERN SPECIES	9	ENSSTUG00000031999	ENSSTUG00000032011	CDR2 (ENSSTUG00000032030)	polr3e (ENSSTUG00000032076)	eef2k (ENSSTUG00000033337)	tha1 (ENSSTUG00000033376)	ENSSTUG00000033391	mrtfab (ENSSTUG00000033398) ##13	desi1b (ENSSTUG00000033425) #32	xrcc6 (ENSSTUG00000033443) #33	ENSSTUG00000033802	ENSSTUG00000033810	josd1 (ENSSTUG00000033853)	ENSSTUG00000033872	EP300 (ENSSTUG00000033907) #20	l3mbtl2 (ENSSTUG00000034401) #22	chadlb (ENSSTUG00000034453)	rangap1b (ENSSTUG00000034462) #24	ZC3H7B (ENSSTUG00000034512) #25	tefa (ENSSTUG00000034592) #26	phf5a (ENSSTUG00000034623) #27	aco2 (ENSSTUG00000034674) #28	CSDC2 (ENSSTUG00000035962) #30	GUCY2C (ENSSTUG00000035978)	ENSSTUG00000036305	PLBD1 (ENSSTUG00000036378)	cby1 (ENSSTUG00000036903)	pdap1a (ENSSTUG00000036911)	SH3BP1 (ENSSTUG00000036926)	ENSSTUG00000036995	ENSSTUG00000037001
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	147								ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT00940000155813.i.b.f
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722	ENSGT00940000155813.i.b.f.a
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #32	ENSGT00940000153239.B.f #33	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #27	ENSGT00940000154892.m.b.d #28	ENSGT00390000000022.b.b.b #30	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT01010000229564	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Coho salmon	MODERN SPECIES	2	ENSOKIG00005007343	ENSOKIG00005007329	CDR2 (ENSOKIG00005007306)	ENSOKIG00005007282	POLR3E (ENSOKIG00005007240)	eef2k (ENSOKIG00005007171)	tha1 (ENSOKIG00005007124)	ENSOKIG00005007067 ##13	ENSOKIG00005007041	desi1b (ENSOKIG00005007029) #32	xrcc6 (ENSOKIG00005006924) #33	ENSOKIG00005006896	josd1 (ENSOKIG00005006888)	ENSOKIG00005006878	EP300 (ENSOKIG00005005140) #20	l3mbtl2 (ENSOKIG00005004839) #22	chadlb (ENSOKIG00005004813)	rangap1b (ENSOKIG00005004716) #24	ZC3H7B (ENSOKIG00005004689) #25	tefa (ENSOKIG00005004663) #26	phf5a (ENSOKIG00005004637) #27	aco2 (ENSOKIG00005003655) #28	CSDC2 (ENSOKIG00005003568) #30	ENSOKIG00005002499	ENSOKIG00005002241	PLBD1 (ENSOKIG00005002045)	ENSOKIG00005001953	pdap1a (ENSOKIG00005012108)	ENSOKIG00005011924	ENSOKIG00005011872	ENSOKIG00005011850
Chinook salmon	MODERN SPECIES		ENSOTSG00005014033	ENSOTSG00005014034	ENSOTSG00005014035	CDR2 (ENSOTSG00005014036)	polr3e (ENSOTSG00005014038)	eef2k (ENSOTSG00005014062)	tha1 (ENSOTSG00005014068)	ENSOTSG00005014069 ##13	mrtfab (ENSOTSG00005014071) ##13	ENSOTSG00005014074	desi1b (ENSOTSG00005014077) #32	xrcc6 (ENSOTSG00005014078) #33	josd1 (ENSOTSG00005014101)	ENSOTSG00005014103	EP300 (ENSOTSG00005014113) #20	l3mbtl2 (ENSOTSG00005014144) #22	chadlb (ENSOTSG00005014302)	ENSOTSG00005014303	ENSOTSG00005014305	RANGAP1 (ENSOTSG00005014308) #24	ZC3H7B (ENSOTSG00005014316) #25	tefa (ENSOTSG00005014317) #26	phf5a (ENSOTSG00005014318) #27	aco2 (ENSOTSG00005014323) #28	CSDC2 (ENSOTSG00005017611) #30	ENSOTSG00005017639	ENSOTSG00005021719	PLBD1 (ENSOTSG00005021728)	ENSOTSG00005023029	pdap1a (ENSOTSG00005023031)	ENSOTSG00005023033
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000044563	ENSOMYG00000044568	ENSOMYG00000048942	CDR2 (ENSOMYG00000044576)	ENSOMYG00000044581	ENSOMYG00000044584	EEF2K (ENSOMYG00000044604)	ENSOMYG00000044616	mrtfab (ENSOMYG00000044624) ##13	ENSOMYG00000073573	desi1b (ENSOMYG00000044645) #32	xrcc6 (ENSOMYG00000044661) #33	josd1 (ENSOMYG00000044704)	ENSOMYG00000044706	ENSOMYG00000044715 #20	l3mbtl2 (ENSOMYG00000044742) #22	chadlb (ENSOMYG00000044762)	rangap1b (ENSOMYG00000044802) #24	ZC3H7B (ENSOMYG00000044864) #25	tefa (ENSOMYG00000044872) #26	phf5a (ENSOMYG00000044879) #27	aco2 (ENSOMYG00000044954) #28	ENSOMYG00000045437 #30	ENSOMYG00000065029	ENSOMYG00000069439	ENSOMYG00000045501	ENSOMYG00000045626	ENSOMYG00000045631	ENSOMYG00000045667	pdap1a (ENSOMYG00000045795)	ENSOMYG00000045804
Huchen	MODERN SPECIES	506																l3mbtl2 (ENSHHUG00000012935) #22	chadlb (ENSHHUG00000012910)	rangap1b (ENSHHUG00000012688) #24	ZC3H7B (ENSHHUG00000012672) #25	tefa (ENSHHUG00000012668) #26	phf5a (ENSHHUG00000012665) #27	aco2 (ENSHHUG00000012645) #28	CSDC2 (ENSHHUG00000012640) #30	ENSHHUG00000012624	GUCY2C (ENSHHUG00000012612)	ENSHHUG00000012581	PLBD1 (ENSHHUG00000012535)	pdap1a (ENSHHUG00000012521)	ENSHHUG00000012495	ENSHHUG00000012489	ENSHHUG00000012461
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b.d.a.b #22
Huchen	MODERN SPECIES	11515																ENSHHUG00000016613 #22
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #32	ENSGT00940000153239.B.e #33	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.a.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #27	ENSGT00390000018518.ib #27	ENSGT00940000154892.m.b.c #28	ENSGT00390000000022.b.b.a #30	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #32	ENSGT00940000153239.B.e #33	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.a.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #27	ENSGT00940000154892.m.b.c #28	ENSGT00390000000022.b.b.a #30	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g	ENSGT00940000161112.d
Rainbow trout	MODERN SPECIES	12	DHX8 (ENSOMYG00000020305)	ENSOMYG00000017863	meox1 (ENSOMYG00000017853)	ENSOMYG00000053297	ENSOMYG00000017846	ENSOMYG00000063210	ENSOMYG00000017828	ENSOMYG00000017552	ENSOMYG00000017414 ##13	ENSOMYG00000017381	desi1b (ENSOMYG00000017395) #32	xrcc6 (ENSOMYG00000017357) #33	josd1 (ENSOMYG00000017332)	ENSOMYG00000017328	ENSOMYG00000016994 #20	l3mbtl2 (ENSOMYG00000055655) #22	ENSOMYG00000072442 #25	tefa (ENSOMYG00000016891) #26	phf5a (ENSOMYG00000016861) #27	aco2 (ENSOMYG00000016376) #28	ENSOMYG00000016354 #30	ENSOMYG00000069177	ENSOMYG00000015952	ENSOMYG00000059884	ENSOMYG00000015861	cby1 (ENSOMYG00000015849)	pdap1a (ENSOMYG00000015825)	ENSOMYG00000015806	ENSOMYG00000015796	ENSOMYG00000015787	csnk1e (ENSOMYG00000013518)
Salmoninae	ANCESTRAL SPECIES	424									ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #32	ENSGT00940000153239.B.e #33	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #27	ENSGT00940000154892.m.b.c #28	ENSGT00390000000022.b.b.a #30	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g	ENSGT00940000161112.d
Huchen	MODERN SPECIES	288										ENSHHUG00000046850	desi1b (ENSHHUG00000046855) #32	xrcc6 (ENSHHUG00000046863) #33	josd1 (ENSHHUG00000046896)	ENSHHUG00000046898	EP300 (ENSHHUG00000046937) #20	ENSHHUG00000047060 #22	ENSHHUG00000047079	ENSHHUG00000047084	ENSHHUG00000047086	ENSHHUG00000047089 #25	tefa (ENSHHUG00000047095) #26	phf5a (ENSHHUG00000047108) #27	aco2 (ENSHHUG00000047122) #28	ENSHHUG00000047159	CSDC2 (ENSHHUG00000047162) #30	ENSHHUG00000047164	ENSHHUG00000047173	cby1 (ENSHHUG00000047186)	pdap1a (ENSHHUG00000000012)	ENSHHUG00000000094	ENSHHUG00000000152
Northern pike	MODERN SPECIES	4	kdelr2b (ENSELUG00000020755)	mettl9 (ENSELUG00000020737)	ENSELUG00000020703	ENSELUG00000028258	CDR2 (ENSELUG00000033724)	polr3e (ENSELUG00000020683)	eef2k (ENSELUG00000000906)	tha1 (ENSELUG00000020367)	mrtfab (ENSELUG00000020339) ##13	ENSELUG00000020324	desi1b (ENSELUG00000020313) #32	xrcc6 (ENSELUG00000020301) #33	josd1 (ENSELUG00000020267)	ENSELUG00000020028	EP300 (ENSELUG00000020189) #20	l3mbtl2 (ENSELUG00000019986) #22	chadlb (ENSELUG00000019959)	rangap1b (ENSELUG00000019942) #24	ZC3H7B (ENSELUG00000019891) #25	tefa (ENSELUG00000019815) #26	phf5a (ENSELUG00000019796) #27	aco2 (ENSELUG00000019769) #28	CSDC2 (ENSELUG00000019696) #30	ENSELUG00000019680	ENSELUG00000019633	PLBD1 (ENSELUG00000019605)	cby1 (ENSELUG00000019580)	pdap1a (ENSELUG00000019533)	ENSELUG00000019508	ENSELUG00000000853	ENSELUG00000019468
Acanthomorphata	ANCESTRAL SPECIES	23								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Euacanthomorphacea	ANCESTRAL SPECIES	6								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00390000008061.ab.a.a.a.a	ENSGT00390000008061.ab.a.a.a.b	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b
Javanese ricefish	MODERN SPECIES	10	ENSOJAG00000002967	rbp3 (ENSOJAG00000003044)	gdf2 (ENSOJAG00000003053)	gdf10b (ENSOJAG00000003077)	FRMPD2 (ENSOJAG00000003085)	mapk8b (ENSOJAG00000003171)	ARHGAP22 (ENSOJAG00000003508)	VSTM4 (ENSOJAG00000004182)	ENSOJAG00000004244	ENSOJAG00000004257 ##13	ENSOJAG00000004271 ##13	xrcc6 (ENSOJAG00000004317) #33	ENSOJAG00000004376	josd1 (ENSOJAG00000004391)	CBX7 (ENSOJAG00000004405)	l3mbtl2 (ENSOJAG00000004841) #22	chadlb (ENSOJAG00000004868)	rangap1b (ENSOJAG00000004890) #24	ZC3H7B (ENSOJAG00000005022) #25	tefa (ENSOJAG00000005056) #26	phf5a (ENSOJAG00000005081) #27	aco2 (ENSOJAG00000005119) #28	csdc2a (ENSOJAG00000005463) #30	ENSOJAG00000005484	ENSOJAG00000005487	ENSOJAG00000005500	ENSOJAG00000005507	ENSOJAG00000005520	ENSOJAG00000005616	PLBD1 (ENSOJAG00000005665)	cby1 (ENSOJAG00000006380)
Indian medaka	MODERN SPECIES	17	LRRC18 (ENSOMEG00000009322)	ARHGAP22 (ENSOMEG00000009296)	mapk8b (ENSOMEG00000009255)	FRMPD2 (ENSOMEG00000009174)	gdf10b (ENSOMEG00000009101)	gdf2 (ENSOMEG00000009094)	rbp3 (ENSOMEG00000009087)	ENSOMEG00000009072	ENSOMEG00000009039	xrcc6 (ENSOMEG00000008998) #33	ENSOMEG00000008945	josd1 (ENSOMEG00000008932)	ENSOMEG00000008892	EP300 (ENSOMEG00000008863) #20	ENSOMEG00000008818	l3mbtl2 (ENSOMEG00000008798) #22	chadlb (ENSOMEG00000008740)	rangap1b (ENSOMEG00000008703) #24	ZC3H7B (ENSOMEG00000008642) #25	tefa (ENSOMEG00000008586) #26	phf5a (ENSOMEG00000008564) #27	aco2 (ENSOMEG00000000704) #28	csdc2a (ENSOMEG00000008503) #30	ENSOMEG00000008492	ENSOMEG00000000840	ENSOMEG00000008483	ENSOMEG00000008473	ENSOMEG00000000207	ENSOMEG00000008464	ENSOMEG00000008455	ENSOMEG00000008443
Oryzias_a	ANCESTRAL SPECIES	32	ENSGT00390000014726.c.b	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b
Japanese Medaka HdrR	MODERN SPECIES	10	rbp3 (ENSORLG00000020292)	gdf2 (ENSORLG00000020287)	gdf10b (ENSORLG00000020281)	ENSORLG00000028063	FRMPD2 (ENSORLG00000002323)	mapk8b (ENSORLG00000002370)	ARHGAP22 (ENSORLG00000002387)	LRRC18 (ENSORLG00000002394)	VSTM4 (ENSORLG00000002399)	mrtfab (ENSORLG00000002421) ##13	ENSORLG00000025662	xrcc6 (ENSORLG00000002436) #33	josd1 (ENSORLG00000029725)	ENSORLG00000026332	ENSORLG00000002496 #20	l3mbtl2 (ENSORLG00000002510) #22	chadlb (ENSORLG00000002517)	rangap1b (ENSORLG00000002547) #24	ZC3H7B (ENSORLG00000002568) #25	tefa (ENSORLG00000002582) #26	phf5a (ENSORLG00000002591) #27	aco2 (ENSORLG00000002618) #28	csdc2a (ENSORLG00000024428) #30	ENSORLG00000028944	ENSORLG00000002652	ENSORLG00000028670	ENSORLG00000029436	ENSORLG00000028126	ENSORLG00000025322	gucy2cb (ENSORLG00000002713)	ENSORLG00000025913
Chinese medaka	MODERN SPECIES	572															EP300 (ENSOSIG00000018487) #20	l3mbtl2 (ENSOSIG00000018481) #22	chadlb (ENSOSIG00000018479)
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Cyprinodontoidei	ANCESTRAL SPECIES	28	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
NAME_4	ANCESTRAL SPECIES	27	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
Mummichog	MODERN SPECIES	2261	RBP3 (ENSFHEG00000017358)	rbp3 (ENSFHEG00000017348)	ENSFHEG00000017324	ubtd1b (ENSFHEG00000017199)	mms19 (ENSFHEG00000017171)	zdhhc16b (ENSFHEG00000000433)	vps35l (ENSFHEG00000016996)	get4 (ENSFHEG00000016923)	mrtfab (ENSFHEG00000016878) ##13	desi1b (ENSFHEG00000016842) #32	xrcc6 (ENSFHEG00000016833) #33	ENSFHEG00000016818	josd1 (ENSFHEG00000016813)	ENSFHEG00000016782	EP300 (ENSFHEG00000016768) #20	l3mbtl2 (ENSFHEG00000016621) #22	chadlb (ENSFHEG00000016608)
Sheepshead minnow	MODERN SPECIES	509	dhrs13b.1 (ENSCVAG00000002076)	rbp3 (ENSCVAG00000002079)	ENSCVAG00000002086	ubtd1b (ENSCVAG00000002093)	mms19 (ENSCVAG00000002113)	zdhhc16b (ENSCVAG00000002126)	vps35l (ENSCVAG00000002135)	get4 (ENSCVAG00000002141)	mrtfab (ENSCVAG00000002168) ##13	desi1b (ENSCVAG00000002180) #32	xrcc6 (ENSCVAG00000002189) #33	josd1 (ENSCVAG00000002195)	CBX7 (ENSCVAG00000002206)	EP300 (ENSCVAG00000002250) #20	ENSCVAG00000002255	ENSCVAG00000002259 #22	chadlb (ENSCVAG00000002262)	rangap1b (ENSCVAG00000002275) #24
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
Poecilia	ANCESTRAL SPECIES	15	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.b	ENSGT00940000154352.A
NAME_6	ANCESTRAL SPECIES		ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.b	ENSGT00940000154352.A
Amazon molly	MODERN SPECIES	256	ubtd1b (ENSPFOG00000017463)	mms19 (ENSPFOG00000017424)	zdhhc16b (ENSPFOG00000024323)	zdhhc16b (ENSPFOG00000017419)	vps35l (ENSPFOG00000017291)	get4 (ENSPFOG00000017263)	mrtfab (ENSPFOG00000017227) ##13	ENSPFOG00000023236	ENSPFOG00000017214	desi1b (ENSPFOG00000017196) #32	xrcc6 (ENSPFOG00000017173) #33	ENSPFOG00000023433	josd1 (ENSPFOG00000017162)	ENSPFOG00000017155	ENSPFOG00000017073 #20	l3mbtl2 (ENSPFOG00000017006) #22	chadlb (ENSPFOG00000016956)	rangap1b (ENSPFOG00000016919) #24	ZC3H7B (ENSPFOG00000016834) #25	tefa (ENSPFOG00000016821) #26	phf5a (ENSPFOG00000016814) #27	aco2 (ENSPFOG00000016765) #28	csdc2a (ENSPFOG00000016755) #30	ENSPFOG00000020239	med24 (ENSPFOG00000016585)	ENSPFOG00000016574	ENSPFOG00000020238	top2a (ENSPFOG00000016534)	ENSPFOG00000016322	rarab (ENSPFOG00000016312)	mki67 (ENSPFOG00000016223)
Sailfin molly	MODERN SPECIES	1970																l3mbtl2 (ENSPLAG00000001276) #22	chadlb (ENSPLAG00000001281)	rangap1b (ENSPLAG00000001283) #24	ZC3H7B (ENSPLAG00000001288) #25	tefa (ENSPLAG00000001290) #26	phf5a (ENSPLAG00000001292) #27	aco2 (ENSPLAG00000001300) #28	csdc2a (ENSPLAG00000001305) #30
Guppy	MODERN SPECIES	449	ENSPREG00000021342	ubtd1b (ENSPREG00000021331)	mms19 (ENSPREG00000021276)	zdhhc16b (ENSPREG00000021251)	vps35l (ENSPREG00000021171)	get4 (ENSPREG00000021122)	mrtfab (ENSPREG00000021039) ##13	ENSPREG00000020998	desi1b (ENSPREG00000020982) #32	xrcc6 (ENSPREG00000020957) #33	josd1 (ENSPREG00000020940)	ENSPREG00000020913	EP300 (ENSPREG00000020888) #20	ENSPREG00000020876	ENSPREG00000020869	l3mbtl2 (ENSPREG00000020853) #22	chadlb (ENSPREG00000020780)	rangap1b (ENSPREG00000020745) #24	ZC3H7B (ENSPREG00000020727) #25	tefa (ENSPREG00000020710) #26	phf5a (ENSPREG00000020700) #27	aco2 (ENSPREG00000020672) #28	csdc2a (ENSPREG00000020652) #30	ENSPREG00000020645	ENSPREG00000020640	med24 (ENSPREG00000020582)	ENSPREG00000020569	ENSPREG00000020563	top2a (ENSPREG00000020534)	ENSPREG00000020520	rarab (ENSPREG00000020502)
Platyfish	MODERN SPECIES	1	RBP3 (ENSXMAG00000009541)	rbp3 (ENSXMAG00000029663)	ENSXMAG00000029632	ubtd1b (ENSXMAG00000022287)	mms19 (ENSXMAG00000009570)	zdhhc16b (ENSXMAG00000025584)	vps35l (ENSXMAG00000009612)	get4 (ENSXMAG00000009654)	mrtfab (ENSXMAG00000009671) ##13	ENSXMAG00000009684	desi1b (ENSXMAG00000009685) #32	xrcc6 (ENSXMAG00000009691) #33	josd1 (ENSXMAG00000021882)	ENSXMAG00000009724	EP300 (ENSXMAG00000009730) #20	l3mbtl2 (ENSXMAG00000009758) #22	chadlb (ENSXMAG00000000655)	rangap1b (ENSXMAG00000000663) #24	ZC3H7B (ENSXMAG00000026502) #25	tefa (ENSXMAG00000000678) #26	phf5a (ENSXMAG00000000679) #27	aco2 (ENSXMAG00000000683) #28	csdc2a (ENSXMAG00000000696) #30	ENSXMAG00000027223	ENSXMAG00000019660	med24 (ENSXMAG00000011374)	ENSXMAG00000028761	ENSXMAG00000021866	ENSXMAG00000019659	top2a (ENSXMAG00000011303)	ENSXMAG00000011301
Aplocheiloidei	ANCESTRAL SPECIES	181								ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00390000018518 #27	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00440000039203.i #24	ENSGT00940000165277.a
Turquoise killifish	MODERN SPECIES	1621	ENSNFUG00015019211	BX000473.3 (ENSNFUG00015019205)	CDC42EP1 (ENSNFUG00015019200)	SH3BP1 (ENSNFUG00015019194)	CSDC2A (ENSNFUG00015019188) #30	ENSNFUG00015019187	ACO2 (ENSNFUG00015019055) #28	mrtfab (ENSNFUG00015019027) ##13	ENSNFUG00015019018	desi1b (ENSNFUG00015019008) #32	xrcc6 (ENSNFUG00015018912) #33	ENSNFUG00015018905	josd1 (ENSNFUG00015018897)	CBX7 (ENSNFUG00015018890)	EP300 (ENSNFUG00015018836) #20	L3MBTL2 (ENSNFUG00015018832) #22	phf5a (ENSNFUG00015018826) #27	TEFA (ENSNFUG00015018821) #26	ZC3H7B (ENSNFUG00015018799) #25	RANGAP1 (ENSNFUG00015018710) #24	chadlb (ENSNFUG00015018697)	GET4 (ENSNFUG00015018662)	C12H16ORF62 (ENSNFUG00015018337)	zdhhc16b (ENSNFUG00015018329)	MMS19 (ENSNFUG00015017663)	UBTD1B (ENSNFUG00015017624)	ENSNFUG00015017614	rbp3 (ENSNFUG00015017608)	ENSNFUG00015017601	gdf2 (ENSNFUG00015017597)	GDF10B (ENSNFUG00015017594)
Mangrove rivulus	MODERN SPECIES	599												josd1 (ENSKMAG00000006615)	ENSKMAG00000006587	EP300 (ENSKMAG00000006526) #20	ENSKMAG00000006497	ENSKMAG00000006482 #22
Ovalentaria_B	ANCESTRAL SPECIES	7								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pomacentridae	ANCESTRAL SPECIES	182											ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30
Pomacentridae_A	ANCESTRAL SPECIES	214											ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30
Amphiprion	ANCESTRAL SPECIES	254											ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30
Clown anemonefish	MODERN SPECIES	1418										ENSAOCG00000002784	desi1b (ENSAOCG00000002807) #32	xrcc6 (ENSAOCG00000021344) #33	josd1 (ENSAOCG00000021330)	ENSAOCG00000021307	EP300 (ENSAOCG00000021276) #20	l3mbtl2 (ENSAOCG00000021254) #22	chadlb (ENSAOCG00000021226)	rangap1b (ENSAOCG00000021138) #24	ZC3H7B (ENSAOCG00000021081) #25	tefa (ENSAOCG00000020967) #26	phf5a (ENSAOCG00000020917) #27	aco2 (ENSAOCG00000020887) #28	csdc2a (ENSAOCG00000020795) #30	ENSAOCG00000020758	ENSAOCG00000020662	ENSAOCG00000020520	ENSAOCG00000020504	arl8 (ENSAOCG00000020462)	maf1b (ENSAOCG00000020422)	zfand1 (ENSAOCG00000020403)	chmp4c (ENSAOCG00000020395)
Orange clownfish	MODERN SPECIES	25										ENSAPEG00000020779	desi1b (ENSAPEG00000020729) #32	xrcc6 (ENSAPEG00000020712) #33	josd1 (ENSAPEG00000020682)	ENSAPEG00000020659	EP300 (ENSAPEG00000020628) #20	l3mbtl2 (ENSAPEG00000020506) #22	chadlb (ENSAPEG00000020436)	rangap1b (ENSAPEG00000020382) #24	ZC3H7B (ENSAPEG00000020311) #25	tefa (ENSAPEG00000020278) #26	phf5a (ENSAPEG00000020260) #27	aco2 (ENSAPEG00000020171) #28	csdc2a (ENSAPEG00000020151) #30
Spiny chromis	MODERN SPECIES	348											ENSAPOG00000012724	xrcc6 (ENSAPOG00000012704) #33	josd1 (ENSAPOG00000012599)	ENSAPOG00000012563	EP300 (ENSAPOG00000012548) #20	l3mbtl2 (ENSAPOG00000012528) #22	chadlb (ENSAPOG00000012489)	rangap1b (ENSAPOG00000012345) #24	ENSAPOG00000012333	brinp3a.1 (ENSAPOG00000012311)
Bicolor damselfish	MODERN SPECIES	1812															EP300 (ENSSPAG00000022894) #20	l3mbtl2 (ENSSPAG00000022900) #22	ENSSPAG00000022913	chadlb (ENSSPAG00000022921)	rangap1b (ENSSPAG00000022924) #24	ZC3H7B (ENSSPAG00000022933) #25	tefa (ENSSPAG00000022946) #26	phf5a (ENSSPAG00000022955) #27	aco2 (ENSSPAG00000022958) #28	csdc2a (ENSSPAG00000022972) #30
Cichlidae	ANCESTRAL SPECIES	28	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Midas cichlid	MODERN SPECIES	194	rbp3 (ENSACIG00000021020)	ENSACIG00000021047	ubtd1b (ENSACIG00000021104)	mms19 (ENSACIG00000021123)	zdhhc16b (ENSACIG00000021174)	vps35l (ENSACIG00000021198)	get4 (ENSACIG00000021253)	xrcc6 (ENSACIG00000021277) #33	desi1b (ENSACIG00000021296) #32	ENSACIG00000021313	mrtfab (ENSACIG00000021331) ##13	josd1 (ENSACIG00000021386)	ENSACIG00000021398	ENSACIG00000021411 #20	ENSACIG00000021474	ENSACIG00000021488 #22	chadlb (ENSACIG00000021497)	rangap1b (ENSACIG00000021521) #24	ZC3H7B (ENSACIG00000021548) #25	tefa (ENSACIG00000021613) #26	phf5a (ENSACIG00000021628) #27	aco2 (ENSACIG00000021636) #28	csdc2a (ENSACIG00000021654) #30	ENSACIG00000021664	ENSACIG00000021715	PLBD1 (ENSACIG00000021850)	cby1 (ENSACIG00000021908)	pdap1a (ENSACIG00000021921)	SH3BP1 (ENSACIG00000021950)	ENSACIG00000021970	ENSACIG00000021975
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Haplochromini	ANCESTRAL SPECIES	22	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Haplochromini_A	ANCESTRAL SPECIES	24	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
P. nyererei	MODERN SPECIES	300	RBP3 (ENSPNYG00000003191)	rbp3 (ENSPNYG00000003198)	ENSPNYG00000003239	ubtd1b (ENSPNYG00000003316)	mms19 (ENSPNYG00000003347)	zdhhc16b (ENSPNYG00000003524)	vps35l (ENSPNYG00000003668)	get4 (ENSPNYG00000003783)	xrcc6 (ENSPNYG00000003815) #33	desi1b (ENSPNYG00000003863) #32	ENSPNYG00000003881	mrtfab (ENSPNYG00000003895) ##13	josd1 (ENSPNYG00000003924)	CBX7 (ENSPNYG00000003947)	EP300 (ENSPNYG00000004005) #20	l3mbtl2 (ENSPNYG00000004122) #22	ENSPNYG00000004155	chadlb (ENSPNYG00000004177)	rangap1b (ENSPNYG00000004258) #24	ZC3H7B (ENSPNYG00000004322) #25	tefa (ENSPNYG00000004348) #26	phf5a (ENSPNYG00000004375) #27	aco2 (ENSPNYG00000004399) #28	csdc2a (ENSPNYG00000004457) #30	ENSPNYG00000004477	ENSPNYG00000004528	PLBD1 (ENSPNYG00000004547)	cby1 (ENSPNYG00000004563)	pdap1a (ENSPNYG00000004577)	ENSPNYG00000004581	ENSPNYG00000004596
Haplochromini_B	ANCESTRAL SPECIES	24	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #33	ENSGT00730000111100.a.b #32	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Eastern happy	MODERN SPECIES	20	rbp3 (ENSACLG00000018197)	ENSACLG00000018219	ubtd1b (ENSACLG00000018265)	mms19 (ENSACLG00000018291)	zdhhc16b (ENSACLG00000018343)	vps35l (ENSACLG00000018376)	get4 (ENSACLG00000018508)	ENSACLG00000018598	xrcc6 (ENSACLG00000018608) #33	desi1b (ENSACLG00000018683) #32	ENSACLG00000018698	mrtfab (ENSACLG00000018713) ##13	josd1 (ENSACLG00000018856)	ENSACLG00000018872	EP300 (ENSACLG00000018899) #20	l3mbtl2 (ENSACLG00000018958) #22	ENSACLG00000019013	chadlb (ENSACLG00000019020)	rangap1b (ENSACLG00000019057) #24	ZC3H7B (ENSACLG00000019120) #25	tefa (ENSACLG00000019138) #26	phf5a (ENSACLG00000019161) #27	aco2 (ENSACLG00000019179) #28	csdc2a (ENSACLG00000019286) #30	ENSACLG00000019316	ENSACLG00000019454	PLBD1 (ENSACLG00000019493)	cby1 (ENSACLG00000019550)	pdap1a (ENSACLG00000019580)	ENSACLG00000019625	ENSACLG00000019678
Burton s mouthbrooder	MODERN SPECIES	507	RBP3 (ENSHBUG00000023733)	rbp3 (ENSHBUG00000023727)	ENSHBUG00000023696	ubtd1b (ENSHBUG00000023588)	mms19 (ENSHBUG00000023560)	zdhhc16b (ENSHBUG00000023543)	vps35l (ENSHBUG00000023516)	get4 (ENSHBUG00000023309)	xrcc6 (ENSHBUG00000023281) #33	desi1b (ENSHBUG00000023264) #32	ENSHBUG00000023228	mrtfab (ENSHBUG00000023207) ##13	josd1 (ENSHBUG00000023156)	ENSHBUG00000023150	EP300 (ENSHBUG00000023127) #20	l3mbtl2 (ENSHBUG00000023020) #22	ENSHBUG00000022986	chadlb (ENSHBUG00000022961)
Lyretail cichlid	MODERN SPECIES	475	RBP3 (ENSNBRG00000003715)	rbp3 (ENSNBRG00000003723)	ENSNBRG00000003741	ubtd1b (ENSNBRG00000003815)	mms19 (ENSNBRG00000003847)	zdhhc16b (ENSNBRG00000003955)	vps35l (ENSNBRG00000003968)	get4 (ENSNBRG00000004065)	xrcc6 (ENSNBRG00000004125) #33	desi1b (ENSNBRG00000004326) #32	ENSNBRG00000004339	mrtfab (ENSNBRG00000004360) ##13	josd1 (ENSNBRG00000004396)	ENSNBRG00000004419	EP300 (ENSNBRG00000004472) #20	l3mbtl2 (ENSNBRG00000004591) #22	ENSNBRG00000004606	chadlb (ENSNBRG00000004619)	rangap1b (ENSNBRG00000004652) #24	ZC3H7B (ENSNBRG00000004708) #25	tefa (ENSNBRG00000004722) #26	phf5a (ENSNBRG00000004747) #27	aco2 (ENSNBRG00000004766) #28	csdc2a (ENSNBRG00000004848) #30	ENSNBRG00000004863	ENSNBRG00000004953	PLBD1 (ENSNBRG00000004963)	cby1 (ENSNBRG00000005004)	pdap1a (ENSNBRG00000005023)	ENSNBRG00000005057	ENSNBRG00000005076
Nile tilapia	MODERN SPECIES	20	rbp3 (ENSONIG00000033972)	ENSONIG00000019735	ubtd1b (ENSONIG00000019734)	mms19 (ENSONIG00000019726)	zdhhc16b (ENSONIG00000029550)	vps35l (ENSONIG00000019720)	get4 (ENSONIG00000019718)	ENSONIG00000030173	xrcc6 (ENSONIG00000019715) #33	desi1b (ENSONIG00000019714) #32	ENSONIG00000038912	mrtfab (ENSONIG00000019711) ##13	josd1 (ENSONIG00000019707)	cbx7 (ENSONIG00000040830)	EP300 (ENSONIG00000019702) #20	l3mbtl2 (ENSONIG00000019700) #22	ENSONIG00000030167	chadlb (ENSONIG00000019699)	chadlb (ENSONIG00000031087)	rangap1b (ENSONIG00000019697) #24	ZC3H7B (ENSONIG00000019695) #25	ENSONIG00000036143	tefa (ENSONIG00000019694) #26	phf5a (ENSONIG00000040142) #27	aco2 (ENSONIG00000019690) #28	csdc2a (ENSONIG00000028637) #30	ENSONIG00000030486	ENSONIG00000019687	ENSONIG00000019686	PLBD1 (ENSONIG00000019685)	cby1 (ENSONIG00000019684)
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b
Tetraodon	MODERN SPECIES	13	gdf10b (ENSTNIG00000004705)	gdf2 (ENSTNIG00000004704)	rbp3 (ENSTNIG00000004703)	ENSTNIG00000004702	ubtd1b (ENSTNIG00000004701)	mms19 (ENSTNIG00000004700)	zdhhc16b (ENSTNIG00000004699)	vps35l (ENSTNIG00000004698)	get4 (ENSTNIG00000004697)	mrtfab (ENSTNIG00000012948) ##13	ENSTNIG00000001284	xrcc6 (ENSTNIG00000012947) #33	josd1 (ENSTNIG00000012946)	ENSTNIG00000012945	EP300 (ENSTNIG00000012944) #20	l3mbtl2 (ENSTNIG00000012943) #22	chadlb (ENSTNIG00000012942)	rangap1b (ENSTNIG00000002397) #24	ZC3H7B (ENSTNIG00000012941) #25	tefa (ENSTNIG00000012940) #26	phf5a (ENSTNIG00000012939) #27	aco2 (ENSTNIG00000012938) #28	csdc2a (ENSTNIG00000012937) #30	ENSTNIG00000012936	ENSTNIG00000012935	cby1 (ENSTNIG00000012934)	SH3BP1 (ENSTNIG00000012933)	ENSTNIG00000012932	ENSTNIG00000012930	tmem184ba (ENSTNIG00000012929)	maff (ENSTNIG00000001100)
Fugu	MODERN SPECIES		gdf2 (ENSTRUG00000017118)	ENSTRUG00000017116	rbp3 (ENSTRUG00000020642)	ENSTRUG00000017110	ubtd1b (ENSTRUG00000022232)	mms19 (ENSTRUG00000017103)	zdhhc16b (ENSTRUG00000017097)	vps35l (ENSTRUG00000017090)	get4 (ENSTRUG00000017084)	mrtfab (ENSTRUG00000031201) ##13	ENSTRUG00000023990	xrcc6 (ENSTRUG00000017070) #33	josd1 (ENSTRUG00000017067)	ENSTRUG00000033494	EP300 (ENSTRUG00000017051) #20	l3mbtl2 (ENSTRUG00000017044) #22	chadlb (ENSTRUG00000017043)	rangap1b (ENSTRUG00000017035) #24	ZC3H7B (ENSTRUG00000017030) #25	tefa (ENSTRUG00000022293) #26	phf5a (ENSTRUG00000030258) #27	aco2 (ENSTRUG00000017021) #28	csdc2a (ENSTRUG00000028048) #30	ENSTRUG00000017007	ENSTRUG00000022094	cby1 (ENSTRUG00000017001)	ENSTRUG00000017000	pdap1a (ENSTRUG00000025459)	ENSTRUG00000016993	ENSTRUG00000021426	ENSTRUG00000016989
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Ballan wrasse	MODERN SPECIES	225								mrtfab (ENSLBEG00000002808) ##13	ENSLBEG00000002764	desi1b (ENSLBEG00000002733) #32	xrcc6 (ENSLBEG00000002691) #33	ENSLBEG00000002655	josd1 (ENSLBEG00000002624)	ENSLBEG00000002577	EP300 (ENSLBEG00000002487) #20	l3mbtl2 (ENSLBEG00000002456) #22	chadlb (ENSLBEG00000002434)	rangap1b (ENSLBEG00000002303) #24	ENSLBEG00000002272	ZC3H7B (ENSLBEG00000002212) #25	tefa (ENSLBEG00000002171) #26	phf5a (ENSLBEG00000002141) #27	aco2 (ENSLBEG00000002060) #28	csdc2a (ENSLBEG00000002005) #30	ENSLBEG00000001763	ENSLBEG00000001676	PLBD1 (ENSLBEG00000001605)	cby1 (ENSLBEG00000001581)	pdap1a (ENSLBEG00000001543)	ENSLBEG00000001514	ENSLBEG00000001487
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b
European seabass	MODERN SPECIES	11	RBP3 (ENSDLAG00005017198)	rbp3 (ENSDLAG00005017214)	ENSDLAG00005017225	ubtd1b (ENSDLAG00005017291)	mms19 (ENSDLAG00005017304)	zdhhc16b (ENSDLAG00005017597)	ENSDLAG00005017644	ENSDLAG00005018874	ENSDLAG00005018943 ##13	ENSDLAG00005018987	desi1b (ENSDLAG00005026916) #32	xrcc6 (ENSDLAG00005019010) #33	josd1 (ENSDLAG00005033772)	ENSDLAG00005033106	ENSDLAG00005019268 #20	l3mbtl2 (ENSDLAG00005019488) #22	ENSDLAG00005019512	chadlb (ENSDLAG00005019521)	rangap1b (ENSDLAG00005027546) #24	ZC3H7B (ENSDLAG00005019560) #25	tefa (ENSDLAG00005019578) #26	phf5a (ENSDLAG00005019582) #27	aco2 (ENSDLAG00005019603) #28	CSDC2 (ENSDLAG00005033654) #30	ENSDLAG00005019682	ENSDLAG00005020252	pvalb3 (ENSDLAG00005020292)	ENSDLAG00005020303	bhlha15 (ENSDLAG00005033943)	ENSDLAG00005020318	baiap2l1a (ENSDLAG00005020402)
Large yellow croaker	MODERN SPECIES	488	ENSLCRG00005009500	ubtd1b (ENSLCRG00005009499)	mms19 (ENSLCRG00005008863)	zdhhc16b (ENSLCRG00005008858)	vps35l (ENSLCRG00005008733)	get4 (ENSLCRG00005008718)	mrtfab (ENSLCRG00005008710) ##13	ENSLCRG00005008707	desi1b (ENSLCRG00005008706) #32	xrcc6 (ENSLCRG00005008686) #33	ENSLCRG00005008685	josd1 (ENSLCRG00005008683)	ENSLCRG00005008682	EP300 (ENSLCRG00005007933) #20	ENSLCRG00005007921	l3mbtl2 (ENSLCRG00005007917) #22	chadlb (ENSLCRG00005007914)	rangap1b (ENSLCRG00005007889) #24	ZC3H7B (ENSLCRG00005007872) #25	tefa (ENSLCRG00005007867) #26	phf5a (ENSLCRG00005007856) #27	aco2 (ENSLCRG00005007240) #28	ENSLCRG00005006906	ENSLCRG00005006897	cby1 (ENSLCRG00005006895)	pdap1a (ENSLCRG00005006893)	ENSLCRG00005006892	ENSLCRG00005006889	ENSLCRG00005006885	csnk1e (ENSLCRG00005006857)	ENSLCRG00005006851
Gilthead seabream	MODERN SPECIES	12	ubtd1b (ENSSAUG00010002664)	mms19 (ENSSAUG00010002697)	ENSSAUG00010002728	get4 (ENSSAUG00010002741)	vps35l (ENSSAUG00010002925)	ENSSAUG00010003265	zdhhc16b (ENSSAUG00010003273)	mrtfab (ENSSAUG00010003284) ##13	ENSSAUG00010003294	desi1b (ENSSAUG00010003304) #32	xrcc6 (ENSSAUG00010003319) #33	ENSSAUG00010003444	josd1 (ENSSAUG00010003448)	ENSSAUG00010003460	EP300 (ENSSAUG00010003472) #20	l3mbtl2 (ENSSAUG00010003551) #22	chadlb (ENSSAUG00010003657)	rangap1b (ENSSAUG00010003677) #24	ZC3H7B (ENSSAUG00010003702) #25	tefa (ENSSAUG00010003722) #26	phf5a (ENSSAUG00010003737) #27	aco2 (ENSSAUG00010003770) #28	csdc2a (ENSSAUG00010003786) #30	ENSSAUG00010003819	ENSSAUG00010006505	PLBD1 (ENSSAUG00010006533)	cby1 (ENSSAUG00010006885)	pdap1a (ENSSAUG00010006886)	ENSSAUG00010006889	ENSSAUG00010006894	ENSSAUG00010006898
Perciformes	ANCESTRAL SPECIES	9	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Cottioidei	ANCESTRAL SPECIES	12								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	5	DAGLB (ENSGACG00000004974)	get4 (ENSGACG00000004961)	vps35l (ENSGACG00000004948)	zdhhc16b (ENSGACG00000004937)	mms19 (ENSGACG00000004915)	ubtd1b (ENSGACG00000004908)	ENSGACG00000004906	rbp3 (ENSGACG00000004900)	desi1b (ENSGACG00000004894) #32	xrcc6 (ENSGACG00000004868) #33	ENSGACG00000004865	josd1 (ENSGACG00000004862)	ENSGACG00000004855	EP300 (ENSGACG00000004836) #20	ENSGACG00000004832 #22	l3mbtl2 (ENSGACG00000004829) #22	chadlb (ENSGACG00000004821)	rangap1b (ENSGACG00000004810) #24	ZC3H7B (ENSGACG00000004799) #25	tefa (ENSGACG00000004793) #26	phf5a (ENSGACG00000004777) #27	aco2 (ENSGACG00000004686) #28	csdc2a (ENSGACG00000004665) #30	ENSGACG00000004649	ENSGACG00000004643	PLBD1 (ENSGACG00000004637)	cby1 (ENSGACG00000004626)	pdap1a (ENSGACG00000004617)	ENSGACG00000004601	ENSGACG00000004597	ENSGACG00000004592
Stickleback	MODERN SPECIES	5	SPAG9 (ENSGACG00000004995)	DAGLB (ENSGACG00000004974)	get4 (ENSGACG00000004961)	vps35l (ENSGACG00000004948)	zdhhc16b (ENSGACG00000004937)	mms19 (ENSGACG00000004915)	ubtd1b (ENSGACG00000004908)	ENSGACG00000004906	rbp3 (ENSGACG00000004900)	desi1b (ENSGACG00000004894) #32	xrcc6 (ENSGACG00000004868) #33	ENSGACG00000004865	josd1 (ENSGACG00000004862)	ENSGACG00000004855	EP300 (ENSGACG00000004836) #20	ENSGACG00000004832 #22	l3mbtl2 (ENSGACG00000004829) #22	chadlb (ENSGACG00000004821)	rangap1b (ENSGACG00000004810) #24	ZC3H7B (ENSGACG00000004799) #25	tefa (ENSGACG00000004793) #26	phf5a (ENSGACG00000004777) #27	aco2 (ENSGACG00000004686) #28	csdc2a (ENSGACG00000004665) #30	ENSGACG00000004649	ENSGACG00000004643	PLBD1 (ENSGACG00000004637)	cby1 (ENSGACG00000004626)	pdap1a (ENSGACG00000004617)	ENSGACG00000004601	ENSGACG00000004597
Lumpfish	MODERN SPECIES	10	gspt1 (ENSCLMG00005001831)	tomm22 (ENSCLMG00005001807)	maff (ENSCLMG00005001805)	tmem184ba (ENSCLMG00005001803)	csnk1e (ENSCLMG00005001455)	ENSCLMG00005001407	ENSCLMG00005001388	mrtfab (ENSCLMG00005022667) ##13	ENSCLMG00005022665	desi1b (ENSCLMG00005022664) #32	xrcc6 (ENSCLMG00005022659) #33	ENSCLMG00005022650	josd1 (ENSCLMG00005022649)	ENSCLMG00005022647	EP300 (ENSCLMG00005022587) #20	l3mbtl2 (ENSCLMG00005022573) #22	chadlb (ENSCLMG00005022570)	rangap1b (ENSCLMG00005022554) #24	ZC3H7B (ENSCLMG00005022550) #25	tefa (ENSCLMG00005022548) #26	phf5a (ENSCLMG00005022544) #27	aco2 (ENSCLMG00005022485) #28	csdc2a (ENSCLMG00005022484) #30	ENSCLMG00005022482	ENSCLMG00005022481	PLBD1 (ENSCLMG00005022480)	cby1 (ENSCLMG00005022478)	pdap1a (ENSCLMG00005022477)	ENSCLMG00005022470	ENSCLMG00005022465	get4 (ENSCLMG00005022457)
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000178257	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Pike perch	MODERN SPECIES	143	ENSSLUG00000025749	rbp3 (ENSSLUG00000025750)	ENSSLUG00000025755	ubtd1b (ENSSLUG00000025761)	mms19 (ENSSLUG00000025769)	zdhhc16b (ENSSLUG00000025799)	vps35l (ENSSLUG00000025843)	get4 (ENSSLUG00000025894)	mrtfab (ENSSLUG00000025895) ##13	desi1b (ENSSLUG00000025896) #32	ENSSLUG00000025897	xrcc6 (ENSSLUG00000025907) #33	ENSSLUG00000025913	josd1 (ENSSLUG00000025914)	CBX7 (ENSSLUG00000025915)	l3mbtl2 (ENSSLUG00000025920) #22	chadlb (ENSSLUG00000025922)	rangap1b (ENSSLUG00000025925) #24	ZC3H7B (ENSSLUG00000025929) #25	tefa (ENSSLUG00000025932) #26	phf5a (ENSSLUG00000025933) #27	aco2 (ENSSLUG00000025939) #28	csdc2a (ENSSLUG00000025945) #30	ENSSLUG00000025948	ENSSLUG00000025950	PLBD1 (ENSSLUG00000025951)	cby1 (ENSSLUG00000002974)	pdap1a (ENSSLUG00000002997)	SH3BP1 (ENSSLUG00000003026)	ENSSLUG00000003143	ENSSLUG00000003165
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	252												ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	42														ENSCGOG00000019765	ENSCGOG00000019764	ENSCGOG00000019763 #22
Channel bull blenny	MODERN SPECIES	56												ENSCGOG00000006826	ENSCGOG00000006831	ENSCGOG00000006842	ENSCGOG00000006844 #22	ENSCGOG00000006847 #22
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	95														ENSCGOG00000009642	ENSCGOG00000009644	l3mbtl2 (ENSCGOG00000009645) #22
Channel bull blenny	MODERN SPECIES	252													ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	10	tmem184ba (ENSCGOG00000012343)	maff (ENSCGOG00000012445)	tomm22 (ENSCGOG00000012448)	dmc1 (ENSCGOG00000012453)	gspt1 (ENSCGOG00000012478)	rsl1d1 (ENSCGOG00000012707)	ENSCGOG00000012709	EP300 (ENSCGOG00000012710) #20	josd1 (ENSCGOG00000012736)	ENSCGOG00000012739	xrcc6 (ENSCGOG00000012750) #33	desi1b (ENSCGOG00000013231) #32	ENSCGOG00000013232	ENSCGOG00000013234	ENSCGOG00000013237	l3mbtl2 (ENSCGOG00000013243) #22	zdhhc16b (ENSCGOG00000013255)	mms19 (ENSCGOG00000013268)	ubtd1b (ENSCGOG00000013674)	ENSCGOG00000013693	rbp3 (ENSCGOG00000013695)	ENSCGOG00000013697	gdf2 (ENSCGOG00000013700)	gdf10b (ENSCGOG00000013717)	ENSCGOG00000013726	ENSCGOG00000013731	ENSCGOG00000013734	mapk8b (ENSCGOG00000013828)	ARHGAP22 (ENSCGOG00000017599)	LRRC18 (ENSCGOG00000017660)	ENSCGOG00000017661
Channel bull blenny	MODERN SPECIES	252															ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	267											ENSCGOG00000004922	ENSCGOG00000004921	ENSCGOG00000004919	ENSCGOG00000004916	ENSCGOG00000004913	l3mbtl2 (ENSCGOG00000004864) #22
Channel bull blenny	MODERN SPECIES	56													ENSCGOG00000006826	ENSCGOG00000006831	ENSCGOG00000006842	ENSCGOG00000006844 #22	ENSCGOG00000006847 #22
Channel bull blenny	MODERN SPECIES	16	rad51 (ENSCGOG00000004192)	ENSCGOG00000004175	ENSCGOG00000004172	ENSCGOG00000004163	ENSCGOG00000004150	ENSCGOG00000004140	ENSCGOG00000004123	zfp36l1b (ENSCGOG00000004117)	ptger2b (ENSCGOG00000004108)	psmc6 (ENSCGOG00000003362)	cgrrf1 (ENSCGOG00000003342)	ddhd1b (ENSCGOG00000002803)	stxbp6l (ENSCGOG00000002729)	gjd2b (ENSCGOG00000008542)	meis2b (ENSCGOG00000008488)	l3mbtl2 (ENSCGOG00000007774) #22	ENSCGOG00000007746	ENSCGOG00000007737	kcnk10a (ENSCGOG00000007726)	kcnk10a (ENSCGOG00000007721)	kcnk10a (ENSCGOG00000007718)	ENSCGOG00000007711	tnfrsf21 (ENSCGOG00000007709)	cd2ap (ENSCGOG00000007694)	opn5 (ENSCGOG00000007692)	ptchd4 (ENSCGOG00000007689)	ENSCGOG00000007686	ENSCGOG00000007684	ENSCGOG00000007681	ENSCGOG00000007675	TAAR1 (ENSCGOG00000007671)
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Climbing perch	MODERN SPECIES	10	phf5a (ENSATEG00000007455) #27	tefa (ENSATEG00000025207) #26	ENSATEG00000007442	ENSATEG00000007345	csdc2a (ENSATEG00000026239) #30	ENSATEG00000025673	ENSATEG00000029855 ##13	ENSATEG00000026132	mrtfab (ENSATEG00000007179) ##13	desi1b (ENSATEG00000026392) #32	xrcc6 (ENSATEG00000007119) #33	ENSATEG00000007109	josd1 (ENSATEG00000007105)	ENSATEG00000027992	ENSATEG00000006944 #20	l3mbtl2 (ENSATEG00000006919) #22	chadlb (ENSATEG00000006910)	rangap1b (ENSATEG00000006838) #24	rangap1b (ENSATEG00000006586) #24	ZC3H7B (ENSATEG00000006539) #25	tefa (ENSATEG00000006521) #26	phf5a (ENSATEG00000006506) #27	aco2 (ENSATEG00000030073) #28	ENSATEG00000006353	ENSATEG00000006234	zdhhc16b (ENSATEG00000006217)	ubtd1b (ENSATEG00000027660)	ENSATEG00000006091	RBP3 (ENSATEG00000005990)	gdf2 (ENSATEG00000005979)	gdf10b (ENSATEG00000005975)
Siamese fighting fish	MODERN SPECIES	9	gdf2 (ENSBSLG00000023674)	rbp3 (ENSBSLG00000023668)	ubtd1b (ENSBSLG00000023622)	mms19 (ENSBSLG00000023434)	zdhhc16b (ENSBSLG00000023411)	vps35l (ENSBSLG00000023260)	get4 (ENSBSLG00000023194)	mrtfab (ENSBSLG00000023133) ##13	ENSBSLG00000023118	desi1b (ENSBSLG00000023110) #32	xrcc6 (ENSBSLG00000022780) #33	ENSBSLG00000022771	josd1 (ENSBSLG00000022770)	ENSBSLG00000022769	EP300 (ENSBSLG00000022112) #20	l3mbtl2 (ENSBSLG00000021995) #22	chadlb (ENSBSLG00000021966)	ENSBSLG00000021931	ENSBSLG00000021915	rangap1b (ENSBSLG00000021844) #24	ENSBSLG00000021685 #25	tefa (ENSBSLG00000021678) #26	phf5a (ENSBSLG00000021671) #27	aco2 (ENSBSLG00000021620) #28	csdc2a (ENSBSLG00000021611) #30	ENSBSLG00000021437	PLBD1 (ENSBSLG00000021424)	cby1 (ENSBSLG00000021404)	PLBD1 (ENSBSLG00000021324)	cby1 (ENSBSLG00000021302)	pdap1a (ENSBSLG00000021168)
Zig-zag eel	MODERN SPECIES	10	rbp3 (ENSMAMG00000002997)	ENSMAMG00000003038	UBTD1 (ENSMAMG00000027407)	mms19 (ENSMAMG00000003115)	zdhhc16b (ENSMAMG00000003147)	ENSMAMG00000003184	ENSMAMG00000003207	ENSMAMG00000003242 ##13	ENSMAMG00000003315	desi1b (ENSMAMG00000027199) #32	xrcc6 (ENSMAMG00000003368) #33	ENSMAMG00000003420	josd1 (ENSMAMG00000003443)	ENSMAMG00000003463	ENSMAMG00000003489 #20	l3mbtl2 (ENSMAMG00000003515) #22	ENSMAMG00000024639	chadlb (ENSMAMG00000003543)	rangap1b (ENSMAMG00000003552) #24	ZC3H7B (ENSMAMG00000003650) #25	tefa (ENSMAMG00000003725) #26	phf5a (ENSMAMG00000003744) #27	aco2 (ENSMAMG00000003762) #28	csdc2a (ENSMAMG00000003854) #30	ENSMAMG00000003866	ENSMAMG00000024757	ENSMAMG00000003943	cby1 (ENSMAMG00000004028)	pdap1a (ENSMAMG00000024443)	ENSMAMG00000004098	ENSMAMG00000004122
Carangaria	ANCESTRAL SPECIES	13	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Tongue sole	MODERN SPECIES	18	ubtd1b (ENSCSEG00000020376)	mms19 (ENSCSEG00000020378)	zdhhc16b (ENSCSEG00000020386)	vps35l (ENSCSEG00000020390)	get4 (ENSCSEG00000020396)	mrtfab (ENSCSEG00000020403) ##13	ENSCSEG00000020419 ##13	ENSCSEG00000020421	desi1b (ENSCSEG00000020425) #32	xrcc6 (ENSCSEG00000020434) #33	ENSCSEG00000020440	josd1 (ENSCSEG00000020444)	ENSCSEG00000020449	EP300 (ENSCSEG00000020452) #20	ENSCSEG00000020474	l3mbtl2 (ENSCSEG00000020478) #22	chadlb (ENSCSEG00000020482)	rangap1b (ENSCSEG00000020486) #24	ZC3H7B (ENSCSEG00000020490) #25	tefa (ENSCSEG00000020497) #26	phf5a (ENSCSEG00000020499) #27	aco2 (ENSCSEG00000020501) #28	wbp2 (ENSCSEG00000020507)	ENSCSEG00000020518	mrpl38 (ENSCSEG00000020520)	ENSCSEG00000020524	FDXR (ENSCSEG00000020526)	narf (ENSCSEG00000000317)	cybc1 (ENSCSEG00000000320)	hexdc (ENSCSEG00000000330)	ogfod3 (ENSCSEG00000000351)
Turbot	MODERN SPECIES	9	rbp3 (ENSSMAG00000005877)	ENSSMAG00000005884	ubtd1b (ENSSMAG00000005951)	mms19 (ENSSMAG00000005975)	zdhhc16b (ENSSMAG00000006209)	ENSSMAG00000006283	ENSSMAG00000006357	ENSSMAG00000031000 ##13	ENSSMAG00000006443	desi1b (ENSSMAG00000006467) #32	xrcc6 (ENSSMAG00000006496) #33	ENSSMAG00000033260	josd1 (ENSSMAG00000023674)	ENSSMAG00000006575	ENSSMAG00000006608 #20	l3mbtl2 (ENSSMAG00000006666) #22	chadlb (ENSSMAG00000006710)	rangap1b (ENSSMAG00000006741) #24	ZC3H7B (ENSSMAG00000006961) #25	tefa (ENSSMAG00000007034) #26	phf5a (ENSSMAG00000007054) #27	aco2 (ENSSMAG00000007063) #28	csdc2a (ENSSMAG00000007134) #30	ENSSMAG00000007175	ENSSMAG00000007319	ENSSMAG00000007355	cby1 (ENSSMAG00000007381)	pdap1a (ENSSMAG00000007399)	ENSSMAG00000007424	ENSSMAG00000007439	ENSSMAG00000007450
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Seriola	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a.c	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Yellowtail amberjack	MODERN SPECIES	3252	ubtd1b (ENSSLDG00000010511)	mms19 (ENSSLDG00000010244)	zdhhc16b (ENSSLDG00000010182)	vps35l (ENSSLDG00000010117)	get4 (ENSSLDG00000010076)	ENSSLDG00000010052	ENSSLDG00000010037 ##13	ENSSLDG00000010024 ##13	ENSSLDG00000010010	desi1b (ENSSLDG00000009991) #32	xrcc6 (ENSSLDG00000009974) #33	ENSSLDG00000009956	josd1 (ENSSLDG00000009941)	ENSSLDG00000009911	EP300 (ENSSLDG00000009870) #20	l3mbtl2 (ENSSLDG00000009810) #22	chadlb (ENSSLDG00000009774)	rangap1b (ENSSLDG00000009736) #24	ZC3H7B (ENSSLDG00000009664) #25	tefa (ENSSLDG00000009635) #26	phf5a (ENSSLDG00000009619) #27	aco2 (ENSSLDG00000009538) #28	csdc2a (ENSSLDG00000009512) #30	ENSSLDG00000009203	ENSSLDG00000009137	PLBD1 (ENSSLDG00000009056)	cby1 (ENSSLDG00000009036)	pdap1a (ENSSLDG00000009017)	ENSSLDG00000008996	ENSSLDG00000008976	ENSSLDG00000008967
Greater amberjack	MODERN SPECIES	27	rbp3 (ENSSDUG00000006762)	ENSSDUG00000006785	ubtd1b (ENSSDUG00000006863)	ubtd1b (ENSSDUG00000007100)	mms19 (ENSSDUG00000007129)	zdhhc16b (ENSSDUG00000007237)	vps35l (ENSSDUG00000007265)	get4 (ENSSDUG00000007358)	mrtfab (ENSSDUG00000007393) ##13	ENSSDUG00000007510	desi1b (ENSSDUG00000007525) #32	xrcc6 (ENSSDUG00000007542) #33	josd1 (ENSSDUG00000007560)	ENSSDUG00000007573	EP300 (ENSSDUG00000007604) #20	l3mbtl2 (ENSSDUG00000007790) #22	ENSSDUG00000007839	chadlb (ENSSDUG00000007853)	rangap1b (ENSSDUG00000007886) #24	ZC3H7B (ENSSDUG00000007927) #25	tefa (ENSSDUG00000007978) #26	phf5a (ENSSDUG00000008019) #27	aco2 (ENSSDUG00000008036) #28	csdc2a (ENSSDUG00000008082) #30	ENSSDUG00000008101	ENSSDUG00000008135	PLBD1 (ENSSDUG00000008141)	cby1 (ENSSDUG00000008154)	pdap1a (ENSSDUG00000008170)	ENSSDUG00000008185	ENSSDUG00000008199
Barramundi perch	MODERN SPECIES	285										desi1b (ENSLCAG00010026482) #32	ENSLCAG00010026484	xrcc6 (ENSLCAG00010026491) #33	josd1 (ENSLCAG00010026501)	CBX7 (ENSLCAG00010026504)	ENSLCAG00010026520	l3mbtl2 (ENSLCAG00010026525) #22	chadlb (ENSLCAG00010026533)	rangap1b (ENSLCAG00010026538) #24	ZC3H7B (ENSLCAG00010026542) #25	tefa (ENSLCAG00010026549) #26	phf5a (ENSLCAG00010026552) #27	aco2 (ENSLCAG00010000167) #28	csdc2a (ENSLCAG00010000182) #30	ENSLCAG00010000198	ENSLCAG00010000218	ENSLCAG00010000272	cby1 (ENSLCAG00010000387)	ENSLCAG00010000397	ENSLCAG00010000403	ENSLCAG00010000408	ENSLCAG00010000422
Tiger tail seahorse	MODERN SPECIES	24	csnk1e (ENSHCOG00000011031)	ENSHCOG00000010549	ENSHCOG00000010449	ENSHCOG00000010426	pdap1a (ENSHCOG00000000695)	cby1 (ENSHCOG00000010390)	PLBD1 (ENSHCOG00000010381)	ENSHCOG00000010314	ENSHCOG00000010290	csdc2a (ENSHCOG00000010202) #30	aco2 (ENSHCOG00000010190) #28	phf5a (ENSHCOG00000010129) #27	tefa (ENSHCOG00000010116) #26	CBX7 (ENSHCOG00000010097)	EP300 (ENSHCOG00000010078) #20	l3mbtl2 (ENSHCOG00000010008) #22	ENSHCOG00000009974	chadlb (ENSHCOG00000009959)	rangap1b (ENSHCOG00000009890) #24	ZC3H7B (ENSHCOG00000009865) #25	josd1 (ENSHCOG00000009852)	ENSHCOG00000009830	xrcc6 (ENSHCOG00000009821) #33	mrtfab (ENSHCOG00000009798) ##13	get4 (ENSHCOG00000009762)	vps35l (ENSHCOG00000009736)	zdhhc16b (ENSHCOG00000009671)	mms19 (ENSHCOG00000009664)	ubtd1b (ENSHCOG00000009648)	ENSHCOG00000009630	rbp3 (ENSHCOG00000009596)
Pinecone sodierfish	MODERN SPECIES	10	LMF1 (ENSMMDG00005010230)	sox8a (ENSMMDG00005009860)	ENSMMDG00005009799	COX19 (ENSMMDG00005009791)	ENSMMDG00005009789	RNPS1 (ENSMMDG00005009788)	ENSMMDG00005009785	ENSMMDG00005009784	mrtfab (ENSMMDG00005009780) ##13	ENSMMDG00005009776	desi1b (ENSMMDG00005009775) #32	xrcc6 (ENSMMDG00005009465) #33	josd1 (ENSMMDG00005009447)	CBX7 (ENSMMDG00005009442)	EP300 (ENSMMDG00005007777) #20	l3mbtl2 (ENSMMDG00005007754) #22	chadlb (ENSMMDG00005007750)	rangap1b (ENSMMDG00005007732) #24	ZC3H7B (ENSMMDG00005007730) #25	tefa (ENSMMDG00005007728) #26	phf5a (ENSMMDG00005007725) #27	aco2 (ENSMMDG00005007589) #28	ENSMMDG00005007581	csdc2a (ENSMMDG00005007576) #30	ENSMMDG00005007543	ENSMMDG00005007532	PLBD1 (ENSMMDG00005007527)	cby1 (ENSMMDG00005007526)	pdap1a (ENSMMDG00005007521)	SH3BP1 (ENSMMDG00005007516)	ENSMMDG00005007513
Cod	MODERN SPECIES	9	asah2 (ENSGMOG00000030487)	ENSGMOG00000018943	ENSGMOG00000029012	dkk1b (ENSGMOG00000037157)	noc3l (ENSGMOG00000007458)	ENSGMOG00000007474	ENSGMOG00000023741	ENSGMOG00000033808	ENSGMOG00000013318 #27	ENSGMOG00000013551	xrcc6 (ENSGMOG00000013524) #33	ENSGMOG00000024672	josd1 (ENSGMOG00000024543)	ENSGMOG00000013491	ENSGMOG00000013440 #20	l3mbtl2 (ENSGMOG00000013428) #22	chadlb (ENSGMOG00000013414)	rangap1b (ENSGMOG00000013380) #24	ZC3H7B (ENSGMOG00000013351) #25	tefa (ENSGMOG00000028335) #26	aco2 (ENSGMOG00000001946) #28	csdc2a (ENSGMOG00000023085) #30	ENSGMOG00000013257	ENSGMOG00000013246	ENSGMOG00000013233	cby1 (ENSGMOG00000013225)	pdap1a (ENSGMOG00000013218)	ENSGMOG00000013196	ENSGMOG00000030881	ENSGMOG00000013166	ENSGMOG00000013125
Otomorpha	ANCESTRAL SPECIES	1	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.n #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Clupeiformes	ANCESTRAL SPECIES	5	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #27	ENSGT00940000154892.m.b #28	ENSGT00390000000022.b.a.b #30	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000013891	snx11 (ENSCHAG00000013883)	arsg (ENSCHAG00000013856)	slc16a6a (ENSCHAG00000013846)	AMZ2 (ENSCHAG00000013631)	gna13a (ENSCHAG00000013606)	rgs9b (ENSCHAG00000012811)	mrtfab (ENSCHAG00000012744) ##13	ENSCHAG00000012726	desi1b (ENSCHAG00000012716) #32	xrcc6 (ENSCHAG00000012490) #33	ENSCHAG00000012482	josd1 (ENSCHAG00000012467)	ENSCHAG00000012460	EP300 (ENSCHAG00000010123) #20	l3mbtl2 (ENSCHAG00000009331) #22	chadlb (ENSCHAG00000009315)	rangap1b (ENSCHAG00000009208) #24	ZC3H7B (ENSCHAG00000009150) #25	tefa (ENSCHAG00000009131) #26	phf5a (ENSCHAG00000009088) #27	ENSCHAG00000009075	aco2 (ENSCHAG00000007164) #28	csdc2a (ENSCHAG00000007095) #30	ENSCHAG00000007018	ENSCHAG00000003753	ENSCHAG00000003583	PLBD1 (ENSCHAG00000002885)	cby1 (ENSCHAG00000002661)	slc16a8 (ENSCHAG00000002475)	ENSCHAG00000027071
Denticle herring	MODERN SPECIES	18	pgp (ENSDCDG00000029291)	zdhhc4 (ENSDCDG00000029287)	grid2ipb (ENSDCDG00000029212)	arhgap17a (ENSDCDG00000029142)	snx11 (ENSDCDG00000029135)	slc16a6a (ENSDCDG00000029132)	ENSDCDG00000029128	gna13a (ENSDCDG00000029125)	rgs9b (ENSDCDG00000028322)	mrtfab (ENSDCDG00000028306) ##13	ENSDCDG00000028304	xrcc6 (ENSDCDG00000028302) #33	josd1 (ENSDCDG00000028300)	ENSDCDG00000028297	EP300 (ENSDCDG00000028292) #20	l3mbtl2 (ENSDCDG00000028289) #22	chadlb (ENSDCDG00000028284)	ZC3H7B (ENSDCDG00000028270) #25	tefa (ENSDCDG00000028260) #26	phf5a (ENSDCDG00000028255) #27	ENSDCDG00000028244	cby1 (ENSDCDG00000028242)	pdap1a (ENSDCDG00000028241)	ENSDCDG00000028239	ENSDCDG00000028237	ENSDCDG00000028236	memo1 (ENSDCDG00000028225)	ENSDCDG00000028219	VIT (ENSDCDG00000028212)	ENSDCDG00000028210	ENSDCDG00000028209
Otophysi	ANCESTRAL SPECIES		ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #30	ENSGT00940000154892.n #28	ENSGT00390000018518 #27	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Characiphysae	ANCESTRAL SPECIES	1	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #30	ENSGT00940000154892.n #28	ENSGT00390000018518 #27	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Channel catfish	MODERN SPECIES	4	ENSIPUG00000000624	snx11 (ENSIPUG00000000637)	arsg (ENSIPUG00000000690)	slc16a6 (ENSIPUG00000000700)	AMZ2 (ENSIPUG00000000701)	GNA13 (ENSIPUG00000000718)	rgs9b (ENSIPUG00000000729)	mrtfab (ENSIPUG00000000739) ##13	ENSIPUG00000000754	desi1b (ENSIPUG00000000760) #32	xrcc6 (ENSIPUG00000000767) #33	josd1 (ENSIPUG00000000780)	ENSIPUG00000000790	ENSIPUG00000000795	EP300 (ENSIPUG00000000806) #20	l3mbtl2 (ENSIPUG00000000886) #22	chadl (ENSIPUG00000000903)	rangap1b (ENSIPUG00000000910) #24	kctd17 (ENSIPUG00000001013)	GUCY2C (ENSIPUG00000001043)	CSDC2 (ENSIPUG00000001089) #30	aco2 (ENSIPUG00000001101) #28	phf5a (ENSIPUG00000001222) #27	TEF (ENSIPUG00000001239) #26	ENSIPUG00000001283 #25	cby1 (ENSIPUG00000001373)	slc16a8 (ENSIPUG00000001384)	pdap1a (ENSIPUG00000001396)	SH3BP1 (ENSIPUG00000001411)	ENSIPUG00000001458	ENSIPUG00000001483
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #30	ENSGT00940000154892.n #28	ENSGT00390000018518 #27	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Characoidei	ANCESTRAL SPECIES	6	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24
Red-bellied piranha	MODERN SPECIES	1177													josd1 (ENSPNAG00000019371)	ENSPNAG00000019469	EP300 (ENSPNAG00000019634) #20	l3mbtl2 (ENSPNAG00000019694) #22	chadlb (ENSPNAG00000019709)	rangap1b (ENSPNAG00000019718) #24
Mexicana tetra	MODERN SPECIES	19	stx4 (ENSAMXG00000030393)	ENSAMXG00000008153	snx11 (ENSAMXG00000034430)	arsg (ENSAMXG00000007957)	slc16a6a (ENSAMXG00000007885)	AMZ2 (ENSAMXG00000039045)	gna13a (ENSAMXG00000033589)	rgs9b (ENSAMXG00000007688)	mrtfab (ENSAMXG00000007612) ##13	ENSAMXG00000037949	desi1b (ENSAMXG00000030899) #32	xrcc6 (ENSAMXG00000007545) #33	josd1 (ENSAMXG00000034284)	ENSAMXG00000007494	EP300 (ENSAMXG00000007487) #20	l3mbtl2 (ENSAMXG00000018021) #22	chadlb (ENSAMXG00000007483)	rangap1b (ENSAMXG00000007477) #24	ENSAMXG00000015921	adprm (ENSAMXG00000041518)	adprm (ENSAMXG00000031575)	map2k4b (ENSAMXG00000015804)	MYOCD (ENSAMXG00000036216) ##13	DNAH17 (ENSAMXG00000015711)	SHISA6 (ENSAMXG00000015689)	ENSAMXG00000029479	foxk2a (ENSAMXG00000034378)	wdr45b (ENSAMXG00000039426)	mrpl58 (ENSAMXG00000034224)	si:ch1073-357b18.4 (ENSAMXG00000037173)	RNF213 (ENSAMXG00000018097)
Electric eel	MODERN SPECIES	94	stx4 (ENSEEEG00000011559)	ENSEEEG00000011557	snx11 (ENSEEEG00000011554)	arsg (ENSEEEG00000011549)	slc16a6a (ENSEEEG00000011538)	AMZ2 (ENSEEEG00000011533)	gna13a (ENSEEEG00000011519)	rgs9b (ENSEEEG00000011513)	rgs9b (ENSEEEG00000011512)	mrtfab (ENSEEEG00000011506) ##13	ENSEEEG00000011503	desi1b (ENSEEEG00000011501) #32	xrcc6 (ENSEEEG00000011488) #33	josd1 (ENSEEEG00000011487)	ENSEEEG00000011486	l3mbtl2 (ENSEEEG00000011299) #22	chadlb (ENSEEEG00000011292)	rangap1b (ENSEEEG00000011276) #24	ENSEEEG00000011272	GUCY2C (ENSEEEG00000011149)	csdc2a (ENSEEEG00000011143) #30	aco2 (ENSEEEG00000011123) #28	phf5a (ENSEEEG00000011117) #27	tefa (ENSEEEG00000011115) #26	ZC3H7B (ENSEEEG00000011114) #25	cby1 (ENSEEEG00000011111)	pdap1a (ENSEEEG00000011110)	ENSEEEG00000011049	ENSEEEG00000011041	ENSEEEG00000011036	ENSEEEG00000011034
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #32	ENSGT00940000153239.B #33	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #30	ENSGT00940000154892.n #28	ENSGT00390000018518 #27	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	231	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a ##13	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #32	ENSGT00940000153239.B.g #33	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b #20	ENSGT00940000153840.a.b.i #22	ENSGT00440000039203.i.e #24	ENSGT00940000167326.d	ENSGT00390000000022.b.a.b.a #30	ENSGT00940000154892.n.d #28	ENSGT00390000018518.nb.a #27	ENSGT00940000156578.a.b.b #26	ENSGT00390000018542.a.a.b #25
Cyprininae_a	ANCESTRAL SPECIES	37	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a ##13	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #32	ENSGT00940000153239.B.g #33	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b #20	ENSGT00940000153840.a.b.i #22	ENSGT00940000165277.a.b	ENSGT00440000039203.i.e #24	ENSGT00940000167326.d.b	ENSGT00940000167326.d.a	ENSGT00390000000022.b.a.b.a #30	ENSGT00940000154892.n.d #28	ENSGT00390000018518.nb.a #27	ENSGT00940000156578.a.b.b #26	ENSGT00390000018542.a.a.b #25	ENSGT00940000153137.b.f	ENSGT00940000161934.b	ENSGT00390000018509.b.a	ENSGT00940000158369.c	ENSGT00940000160068.a.b.b.b	ENSGT00390000013698.b
Golden-line barbel	MODERN SPECIES	489	calcoco2 (ENSSGRG00000037285)	stx4 (ENSSGRG00000037266)	ENSSGRG00000037265	snx11 (ENSSGRG00000037264)	ENSSGRG00000037263	SLC16A6 (ENSSGRG00000037262)	gna13a (ENSSGRG00000037261)	rgs9b (ENSSGRG00000037260)	mrtfab (ENSSGRG00000037258) ##13	ENSSGRG00000037257	desi1b (ENSSGRG00000037256) #32	xrcc6 (ENSSGRG00000037163) #33	josd1 (ENSSGRG00000037162)	ENSSGRG00000037161	EP300 (ENSSGRG00000037160) #20	l3mbtl2 (ENSSGRG00000037078) #22	rangap1b (ENSSGRG00000037033) #24	ENSSGRG00000036992	csdc2a (ENSSGRG00000036991) #30	aco2 (ENSSGRG00000036978) #28	phf5a (ENSSGRG00000036961) #27	tefa (ENSSGRG00000036959) #26	ENSSGRG00000036955 #25	cby1 (ENSSGRG00000036925)	pdap1a (ENSSGRG00000036923)	ENSSGRG00000036905	ENSSGRG00000036904	ENSSGRG00000036901	ENSSGRG00000036900	tmem184ba (ENSSGRG00000036144)	maff (ENSSGRG00000036133)
Common carp reference	MODERN SPECIES	44	calcoco2 (ENSCCRG00000028055)	stx4 (ENSCCRG00000035606)	ENSCCRG00000062006	snx11 (ENSCCRG00000061393)	ENSCCRG00000005511	ENSCCRG00000080966	ENSCCRG00000060983	gna13a (ENSCCRG00000080916)	rgs9b (ENSCCRG00000005354)	mrtfab (ENSCCRG00000053748) ##13	ENSCCRG00000005336	desi1b (ENSCCRG00000069148) #32	xrcc6 (ENSCCRG00000004076) #33	ENSCCRG00000066110	ENSCCRG00000003483 #20	l3mbtl2 (ENSCCRG00000003980) #22	chadlb (ENSCCRG00000069500)	rangap1b (ENSCCRG00000062787) #24	ENSCCRG00000075478	ENSCCRG00000053343	csdc2a (ENSCCRG00000069621) #30	aco2 (ENSCCRG00000026241) #28	phf5a (ENSCCRG00000028979) #27	tefa (ENSCCRG00000047755) #26	ENSCCRG00000047746 #25	cby1 (ENSCCRG00000047735)	slc16a8 (ENSCCRG00000047728)	pdap1a (ENSCCRG00000041388)	ENSCCRG00000046385	ENSCCRG00000017023	ENSCCRG00000017024
Cyprininae	ANCESTRAL SPECIES	36											ENSGT00730000111100.a.b.d #32	ENSGT00940000153239.B.h #33	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a #20	ENSGT00940000153840.a.b.j #22	ENSGT00940000165277.a	ENSGT00440000039203.i.f #24	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #30	ENSGT00940000154892.n.c #28	ENSGT00390000018518.nb.b #27	ENSGT00940000156578.a.b.a #26	ENSGT00390000018542.a.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934.b	ENSGT00390000018509.b.a	ENSGT00940000158369.c	ENSGT00940000160068.a.b.b.b
Goldfish	MODERN SPECIES	3	PGS1 (ENSCARG00000003207)	cyth1b (ENSCARG00000003240)	HTR7 (ENSCARG00000003268)	ENSCARG00000003277	rpp30 (ENSCARG00000003300)	ankrd1b (ENSCARG00000003339)	pcgf5b (ENSCARG00000003346)	HECTD2 (ENSCARG00000003356)	ppp1r3cb (ENSCARG00000003367)	ENSCARG00000003376	desi1b (ENSCARG00000003378) #32	xrcc6 (ENSCARG00000003391) #33	josd1 (ENSCARG00000003441)	ENSCARG00000003445	EP300 (ENSCARG00000003476) #20	l3mbtl2 (ENSCARG00000003695) #22	chadlb (ENSCARG00000004193)	rangap1b (ENSCARG00000004218) #24	ENSCARG00000004343	ENSCARG00000004424	GUCY2C (ENSCARG00000004615)	csdc2a (ENSCARG00000006872) #30	aco2 (ENSCARG00000006902) #28	phf5a (ENSCARG00000007284) #27	tefa (ENSCARG00000007309) #26	ENSCARG00000007330 #25	cby1 (ENSCARG00000007430)	slc16a8 (ENSCARG00000007446)	ENSCARG00000007477	ENSCARG00000007538	ENSCARG00000007592
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000166841.b	ENSGT00940000160113.g	ENSGT00940000159093.e	ENSGT00940000155575.i.a.f	ENSGT00530000063996.a.b	ENSGT00530000063996.a.a.a	ENSGT00940000157054.u.a.b	ENSGT00940000156505.s.c	ENSGT00950000182979.a.a.a.b.b ##13	ENSGT00940000163663.A.b.b	ENSGT00730000111100.a.b.d #32	ENSGT00940000153239.B.h #33	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a #20	ENSGT00940000153840.a.b.j #22	ENSGT00940000165277.a.a	ENSGT00440000039203.i.f #24	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #30	ENSGT00940000154892.n.c #28	ENSGT00390000018518.nb.b #27	ENSGT00940000156578.a.b.a #26	ENSGT00390000018542.a.a.a #25	ENSGT00940000153137.b.e	ENSGT00940000161934.a	ENSGT00390000018509.b.b	ENSGT00940000158369.d	ENSGT00940000160068.a.b.b.a.a
Common carp reference	MODERN SPECIES	25	calcoco2 (ENSCCRG00000035600)	stx4 (ENSCCRG00000028059)	ENSCCRG00000028063	snx11 (ENSCCRG00000058183)	arsg (ENSCCRG00000035639)	ENSCCRG00000035666	gna13a (ENSCCRG00000055461)	rgs9b (ENSCCRG00000035685)	mrtfab (ENSCCRG00000054456) ##13	ENSCCRG00000005356	ENSCCRG00000059677	desi1b (ENSCCRG00000071135) #32	xrcc6 (ENSCCRG00000074154) #33	ENSCCRG00000068559	ENSCCRG00000057202 #20	l3mbtl2 (ENSCCRG00000035778) #22	chadlb (ENSCCRG00000035780)	rangap1b (ENSCCRG00000035782) #24	ENSCCRG00000035794	ENSCCRG00000059199	ENSCCRG00000035904	csdc2a (ENSCCRG00000026211) #30	aco2 (ENSCCRG00000029008) #28	phf5a (ENSCCRG00000054725) #27	tefa (ENSCCRG00000029207) #26	ENSCCRG00000029231 #25	cby1 (ENSCCRG00000029247)	slc16a8 (ENSCCRG00000029249)	pdap1a (ENSCCRG00000029254)	ENSCCRG00000029256	ENSCCRG00000069767
Golden-line barbel	MODERN SPECIES	56	stx4 (ENSSGRG00000051824)	ENSSGRG00000051825	snx11 (ENSSGRG00000051826)	ENSSGRG00000051827	SLC16A6 (ENSSGRG00000051828)	AMZ2 (ENSSGRG00000051829)	gna13a (ENSSGRG00000051830)	rgs9b (ENSSGRG00000051837)	mrtfab (ENSSGRG00000052071) ##13	ENSSGRG00000052073	desi1b (ENSSGRG00000052074) #32	xrcc6 (ENSSGRG00000052075) #33	josd1 (ENSSGRG00000052117)	ENSSGRG00000052118	EP300 (ENSSGRG00000052125) #20	l3mbtl2 (ENSSGRG00000052168) #22	chadlb (ENSSGRG00000052269)	ENSSGRG00000052270	rangap1b (ENSSGRG00000052271) #24	ENSSGRG00000052272	GUCY2C (ENSSGRG00000052280)	csdc2a (ENSSGRG00000052301) #30	aco2 (ENSSGRG00000052322) #28	phf5a (ENSSGRG00000052726) #27	phf5a (ENSSGRG00000052728) #27	tefa (ENSSGRG00000052733) #26	ENSSGRG00000052734 #25	cby1 (ENSSGRG00000000120)	slc16a8 (ENSSGRG00000000162)	pdap1a (ENSSGRG00000000186)	ENSSGRG00000000218
Zebrafish	MODERN SPECIES	3	mlst8 (ENSDARG00000003167)	bricd5 (ENSDARG00000056247)	ENSDARG00000114422	pgp (ENSDARG00000029695)	zdhhc4 (ENSDARG00000045159)	grid2ipb (ENSDARG00000095603)	ENSDARG00000045157	rgs9b (ENSDARG00000045156)	mrtfab (ENSDARG00000076229) ##13	ENSDARG00000088204	desi1b (ENSDARG00000089529) #32	xrcc6 (ENSDARG00000071551) #33	josd1 (ENSDARG00000071548)	CBX7 (ENSDARG00000087181)	EP300 (ENSDARG00000100666) #20	l3mbtl2 (ENSDARG00000056079) #22	chadlb (ENSDARG00000075903)	rangap1b (ENSDARG00000056059) #24	PLBD1 (ENSDARG00000076015)	ENSDARG00000056050	ENSDARG00000056045	csdc2a (ENSDARG00000041323) #30	aco2 (ENSDARG00000007294) #28	phf5a (ENSDARG00000045155) #27	tefa (ENSDARG00000039117) #26	ZC3H7B (ENSDARG00000055930) #25	cby1 (ENSDARG00000077409)	slc16a8 (ENSDARG00000045153)	pdap1a (ENSDARG00000092546)	ENSDARG00000078119	ENSDARG00000079549
Spotted gar	MODERN SPECIES	650	ncf4 (ENSLOCG00000011446)	ENSLOCG00000011456	baiap2l2b (ENSLOCG00000011463)	pla2g6 (ENSLOCG00000011469)	ENSLOCG00000017847	ENSLOCG00000011475	ENSLOCG00000011482	slc25a17 (ENSLOCG00000011492) #15	ENSLOCG00000011497 ##13	ENSLOCG00000011515	desi1a (ENSLOCG00000011526) #32	xrcc6 (ENSLOCG00000011533) #33	josd1 (ENSLOCG00000011543)	ENSLOCG00000011547 #20	xpnpep3 (ENSLOCG00000011565) #18	ENSLOCG00000011574 #22	rangap1a (ENSLOCG00000011582) #24	zc3h7ba (ENSLOCG00000011588) #25	tefa (ENSLOCG00000011595) #26	TOB2 (ENSLOCG00000011604)	aco2 (ENSLOCG00000011607) #28	polr3h (ENSLOCG00000011621) #29	csdc2a (ENSLOCG00000011627) #30	ENSLOCG00000011637 #31	GUCY2C (ENSLOCG00000011647)	slc16a8 (ENSLOCG00000011658)	ENSLOCG00000011665	ENSLOCG00000017848	ENSLOCG00000011670	ENSLOCG00000011678	ENSLOCG00000011684
Reedfish	MODERN SPECIES	3	ENSECRG00000017420	ENSECRG00000017403	ENSECRG00000017383	ENSECRG00000017346	ENSECRG00000016986	ENSECRG00000016866	ENSECRG00000016848	ENSECRG00000016825	ENSECRG00000016802	ENSECRG00000016783	EP300 (ENSECRG00000016746) #20	xpnpep3 (ENSECRG00000016709) #18	st13 (ENSECRG00000016594) #16	rbx1 (ENSECRG00000016541) #19	ENSECRG00000016483	l3mbtl2 (ENSECRG00000016435) #22	CHADL (ENSECRG00000016311) #23	rangap1a (ENSECRG00000016243) #24	zc3h7ba (ENSECRG00000016172) #25	tefa (ENSECRG00000016143) #26	TOB2 (ENSECRG00000016128)	phf5a (ENSECRG00000016102) #27	aco2 (ENSECRG00000016067) #28	polr3h (ENSECRG00000016042) #29	csdc2a (ENSECRG00000016018) #30	PMM1 (ENSECRG00000015991) #31	ENSECRG00000015952	ENSECRG00000015897	ENSECRG00000015860	ENSECRG00000015841	ENSECRG00000015824
Elephant shark	MODERN SPECIES	1746	ENSCMIG00000005165 ##13	desi1b (ENSCMIG00000005168) #32	ENSCMIG00000005174 #31	csdc2a (ENSCMIG00000005177) #30	polr3h (ENSCMIG00000005180) #29	ENSCMIG00000005181	ENSCMIG00000005184	aco2 (ENSCMIG00000005265) #28	phf5a (ENSCMIG00000005498) #27	TOB2 (ENSCMIG00000005503)	tefa (ENSCMIG00000005514) #26	ZC3H7B (ENSCMIG00000005534) #25	rangap1a (ENSCMIG00000005602) #24	ENSCMIG00000005635	ENSCMIG00000005640	L3MBTL2 (ENSCMIG00000005644) #22	EP300 (ENSCMIG00000005795) #20	rbx1 (ENSCMIG00000006002) #19	xpnpep3 (ENSCMIG00000006008) #18	st13 (ENSCMIG00000006024) #16	ENSCMIG00000006038	ENSCMIG00000006043	ENSCMIG00000006049	ENSCMIG00000006051	ENSCMIG00000006056	ENSCMIG00000006062	ENSCMIG00000006073	ENSCMIG00000006085	gcat (ENSCMIG00000006093)
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a ##22
Cyclostomata	ANCESTRAL SPECIES	609																ENSGT00940000153840.a.a ##22	ENSGT00940000161283
Lamprey	MODERN SPECIES	607																MBTD1 (ENSPMAG00000000120) ##22	nme3 (ENSPMAG00000000119)	ENSPMAG00000000113	RANGAP1 (ENSPMAG00000000110) #24
Hagfish	MODERN SPECIES	926	ENSEBUG00000003955	ENSEBUG00000003265	ENSEBUG00000004268	ENSEBUG00000013358	ENSEBUG00000012176	ENSEBUG00000006253	foxred2 (ENSEBUG00000013252)	TMEM204 (ENSEBUG00000012603)	ENSEBUG00000017029	ENSEBUG00000011011	tob1a (ENSEBUG00000014847)	ENSEBUG00000002577	ENSEBUG00000014106	sumo2b (ENSEBUG00000001359)	mapk8ip3 (ENSEBUG00000016122)	MBTD1 (ENSEBUG00000003473) ##22	NME3 (ENSEBUG00000015136)	kcnk9 (ENSEBUG00000016087)	ENSEBUG00000008810	DEPTOR (ENSEBUG00000003676)	selenoi (ENSEBUG00000016452)	ENSEBUG00000012979	ENSEBUG00000003531	ENSEBUG00000017049	ENSEBUG00000003670	ENSEBUG00000003147	ENSEBUG00000006120	ENSEBUG00000013796	csrp1a (ENSEBUG00000006711)	ENSEBUG00000003836	ENSEBUG00000015025
Gnathostomata	ANCESTRAL SPECIES	400										ENSGT00940000163867	ENSGT00950000183213.a.b	ENSGT00390000007792	ENSGT00940000160624	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b	ENSGT00940000153840.a.a ##22	ENSGT00940000164818.c.a
Euteleostomi	ANCESTRAL SPECIES	401									ENSGT00940000164726	ENSGT00940000163867	ENSGT00950000183213.a.b	ENSGT00390000007792	ENSGT00940000160624	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00440000033919
Actinopterygii	ANCESTRAL SPECIES	54	ENSGT00940000154768.A.b	ENSGT00940000157100	ENSGT00940000155556.c	ENSGT00940000164958	ENSGT00940000156922.b.a	ENSGT00940000165096.b.b	ENSGT00940000169412	ENSGT00940000164900	ENSGT00940000164726	ENSGT00940000163867	ENSGT00950000183213.a.b	ENSGT00390000007792	ENSGT00940000160624	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000155223.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158326	ENSGT00940000158883.a	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b	ENSGT00940000156964.C	ENSGT00390000001244	ENSGT00390000012745	ENSGT00940000165932
Reedfish	MODERN SPECIES	5	dhrs7ca (ENSECRG00000015003)	ENSECRG00000014907	ENSECRG00000014871	ENSECRG00000014743	ENSECRG00000022774	bsk146 (ENSECRG00000022770)	ENSECRG00000022730	sult2st2 (ENSECRG00000022698)	radil2a (ENSECRG00000022684)	ENSECRG00000022646	luc7l3 (ENSECRG00000022628)	ANKRD40 (ENSECRG00000022620)	WFIKKN2 (ENSECRG00000022612)	tob1b (ENSECRG00000022605)	spag9a (ENSECRG00000022438)	MBTD1 (ENSECRG00000022345) ##22	nme2b.2 (ENSECRG00000022317)	UTP18 (ENSECRG00000022302)	ca10a (ENSECRG00000022284)	ENSECRG00000022273	mrpl27 (ENSECRG00000022266)	xylt2 (ENSECRG00000022255)	ENSECRG00000022238	nherf1a (ENSECRG00000022221)	GRIN2C (ENSECRG00000022205)	TMEM104 (ENSECRG00000022178)	nat9 (ENSECRG00000022163)	lrrc59 (ENSECRG00000022152)	CHAD (ENSECRG00000022141) ##23	ENSECRG00000022139	acsf2 (ENSECRG00000022114)
Neopterygii	ANCESTRAL SPECIES	89	ENSGT00940000154768.A.b	ENSGT00940000157100	ENSGT00940000155556.c	ENSGT00940000164958	ENSGT00940000156922.b.a	ENSGT00940000165096.b.b	ENSGT00940000169412	ENSGT00940000164900	ENSGT00940000164726	ENSGT00940000163867	ENSGT00950000183213.a.b	ENSGT00390000007792	ENSGT00940000160624	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000155223.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00530000066520	ENSGT00940000158326	ENSGT00940000158883.a	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b	ENSGT00940000156964.C	ENSGT00390000001244	ENSGT00390000012745	ENSGT00940000165932	ENSGT00940000163471.b
Spotted gar	MODERN SPECIES	648	ENSLOCG00000010843	ENSLOCG00000010854	ENSLOCG00000010874	bsk146 (ENSLOCG00000010878)	ENSLOCG00000010884	sult2st2 (ENSLOCG00000010892)	ENSLOCG00000010899	radil2a (ENSLOCG00000010906)	ENSLOCG00000010918	ENSLOCG00000010947	luc7l3 (ENSLOCG00000010953)	ANKRD40 (ENSLOCG00000010960)	WFIKKN2 (ENSLOCG00000010971)	tob1b (ENSLOCG00000010978)	spag9a (ENSLOCG00000010987)	MBTD1 (ENSLOCG00000011026) ##22	NME2 (ENSLOCG00000011055)	UTP18 (ENSLOCG00000011061)	ca10a (ENSLOCG00000011070)	EME1 (ENSLOCG00000011088)	mrpl27 (ENSLOCG00000011095)	ENSLOCG00000011106	xylt2 (ENSLOCG00000011114)	ENSLOCG00000011121	nherf1a (ENSLOCG00000011132)	GRIN2C (ENSLOCG00000011140)	TMEM104 (ENSLOCG00000011150)	nat9 (ENSLOCG00000011162)	lrrc59 (ENSLOCG00000011171)	ENSLOCG00000011179	tsen54 (ENSLOCG00000011191)
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	141	ENSGT00390000014852.a	ENSGT00390000005895	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b	ENSGT01090000260051.b.a.b	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000162710.c.b	ENSGT00940000167780	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00530000066520	ENSGT00940000158326	ENSGT00940000158883.a	ENSGT00950000182849.B.c.b.a	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b
Clupeocephala	ANCESTRAL SPECIES	12	ENSGT00390000014852.a	ENSGT00390000005895	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b	ENSGT01090000260051.b.a.b	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000162710.c.b	ENSGT00940000167780	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000167542	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000164189	ENSGT00940000176040	ENSGT00940000156854.s	ENSGT00940000159717	ENSGT00940000154076.C.d
Otomorpha	ANCESTRAL SPECIES	156		ENSGT00940000166815	ENSGT00950000183122.A ##11	ENSGT00940000156661.b	ENSGT00940000154209.a.b.a	ENSGT00940000161899	ENSGT00940000160084.h	ENSGT00940000154906.C.d	ENSGT00420000029824	ENSGT00940000153968.b	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000158883.b	ENSGT00390000014660	ENSGT00530000063937.a	ENSGT00940000155223.a.b	ENSGT00940000164818.c.a	ENSGT00940000158256.g	ENSGT00940000159930	ENSGT00940000163380	ENSGT00940000154883.e.a	ENSGT00390000009925.b	ENSGT00940000163471.b	ENSGT00940000165932	ENSGT00390000012745	ENSGT00940000156964.A
Clupeiformes	ANCESTRAL SPECIES	437																ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000158883.b	ENSGT00390000014660	ENSGT00530000063937.a	ENSGT00940000155223.a.b	ENSGT00940000164818.c.a	ENSGT00940000158256.g	ENSGT00940000159930	ENSGT00940000163380
Denticle herring	MODERN SPECIES	11	ENSDCDG00000015765	ZRANB1 (ENSDCDG00000015747)	hpdl (ENSDCDG00000015733)	fam53b (ENSDCDG00000015728)	lhpp (ENSDCDG00000015724)	oat (ENSDCDG00000015712)	CHST15 (ENSDCDG00000015706)	CPXM2 (ENSDCDG00000013977)	GPR26 (ENSDCDG00000013861)	bub3 (ENSDCDG00000013841)	hmx2 (ENSDCDG00000013834)	HMX3 (ENSDCDG00000013829)	ACADSB (ENSDCDG00000021884)	PSTK (ENSDCDG00000021872)	tdrkh (ENSDCDG00000021870)	MBTD1 (ENSDCDG00000021188) ##22	nherf1a (ENSDCDG00000021165)	RAB37 (ENSDCDG00000020882)	ENSDCDG00000020869	mrpl27 (ENSDCDG00000020865)	ENSDCDG00000020863	ca10a (ENSDCDG00000020817)	nme2a (ENSDCDG00000020812)	CASKIN2 (ENSDCDG00000020802)	st6galnac1.1 (ENSDCDG00000020799)	ENSDCDG00000020798	ENSDCDG00000019207	TNNT1 (ENSDCDG00000019119)	unk (ENSDCDG00000019093)	ENSDCDG00000019083	FDXR (ENSDCDG00000017618)
Atlantic herring	MODERN SPECIES	15	znf281b (ENSCHAG00000017862)	ENSCHAG00000017886	ENSCHAG00000017912	nmt1b (ENSCHAG00000018417)	PLCD3 (ENSCHAG00000018524)	acbd4 (ENSCHAG00000019493)	hexim1 (ENSCHAG00000019498)	ARHGAP23 (ENSCHAG00000019508)	ENSCHAG00000019536	LASP1 (ENSCHAG00000019549)	plxdc1 (ENSCHAG00000019584)	ENSCHAG00000020121	cox19 (ENSCHAG00000020141)	RNPS1 (ENSCHAG00000020151)	ENSCHAG00000020158	MBTD1 (ENSCHAG00000002547) ##22	ENSCHAG00000003108	ACADSB (ENSCHAG00000003184)	CPXM2 (ENSCHAG00000004242)	oat (ENSCHAG00000005645)	bub3 (ENSCHAG00000006489)	ENSCHAG00000006576	ENSCHAG00000006707	ENSCHAG00000007158	ENSCHAG00000007279	ENSCHAG00000007292	zgc:92313 (ENSCHAG00000007297)	mapk7 (ENSCHAG00000007309)	vkorc1 (ENSCHAG00000007318)	ENSCHAG00000007329	ENSCHAG00000007607
Otophysi	ANCESTRAL SPECIES	48	ENSGT00390000002373	ENSGT00940000157519.b.a	ENSGT00940000158348.e.a	ENSGT01030000234641.b.a.a	ENSGT00940000155737.b	ENSGT00940000157919.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181.c	ENSGT00940000153536.a.b.a.a	ENSGT00940000161333	ENSGT00940000159924.d	ENSGT00940000159339.sb.a	ENSGT00390000006009.a.a.a.c.a	ENSGT00940000159856	ENSGT00940000154322.A.a	ENSGT00980000198588	ENSGT00940000156555.j
Characiphysae	ANCESTRAL SPECIES	1	ENSGT00940000157396	ENSGT01030000234543.E	ENSGT00940000156503	ENSGT00730000111139	ENSGT00940000161424	ENSGT00550000075024	ENSGT00530000063425.a.a.a.a	ENSGT00940000159118	ENSGT00940000158952	ENSGT00940000154292.a.b.a	ENSGT00940000177029.a.b	ENSGT00940000159080	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00940000155590.i	ENSGT00530000063652.b.a	ENSGT00390000018109	ENSGT00390000018119	ENSGT00940000157107.a.a	ENSGT00940000164397.a	ENSGT00390000017004.a.b.z	ENSGT00940000161939	ENSGT00940000160989	ENSGT00940000158172	ENSGT00940000154187.a.b.a	ENSGT00940000157512.j.c
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT00940000164285.a.e	ENSGT00950000182980.a.b.b.b.hc	ENSGT00940000164251.c	ENSGT00940000167711.a.a	ENSGT00390000018245	ENSGT00550000074867	ENSGT00530000063425.a.a.b	ENSGT00940000159118	ENSGT00940000158952	ENSGT00940000154292.a.b.a	ENSGT00940000177029.a.b	ENSGT00940000159080	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00940000155590.i	ENSGT00530000063652.b.a	ENSGT00390000018109	ENSGT00390000018119	ENSGT00940000157107.a.a	ENSGT00940000164397.a	ENSGT00390000017004.a.b.z	ENSGT00940000163996	ENSGT00940000160989	ENSGT00940000158172	ENSGT00940000154187.a.a	ENSGT00940000154673.b
Characoidei	ANCESTRAL SPECIES	6	ENSGT00390000016617	ENSGT00950000183100.C.f	ENSGT00390000013481.c.b.a	ENSGT00940000164285.a.e	ENSGT00950000182980.a.b.b.b.hc	ENSGT00550000074867	ENSGT00530000063425.a.a.b	ENSGT00940000159118	ENSGT00940000158952	ENSGT00940000154292.a.b.a	ENSGT00940000177029.a.b	ENSGT00940000159080	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00940000155590.i	ENSGT00530000063652.b.a	ENSGT00390000018109	ENSGT00390000018119	ENSGT00940000157107.a.a	ENSGT00940000164397.a	ENSGT00390000017004.a.b.z	ENSGT00940000163996	ENSGT00940000160989	ENSGT00940000158172	ENSGT00940000154187.a.a	ENSGT01030000235211
Red-bellied piranha	MODERN SPECIES	3	pigf (ENSPNAG00000009529)	cript (ENSPNAG00000009503)	gch2 (ENSPNAG00000009481)	socs5a (ENSPNAG00000009458)	calm2b (ENSPNAG00000009449)	ENSPNAG00000009428	msh2 (ENSPNAG00000009400)	ENSPNAG00000009336	foxn2b (ENSPNAG00000009227)	fshr (ENSPNAG00000009201)	ENSPNAG00000009070	asb3 (ENSPNAG00000008926)	ENSPNAG00000008915	TMEM94 (ENSPNAG00000008880)	tdrkh (ENSPNAG00000008783)	MBTD1 (ENSPNAG00000005449) ##22	nherf1a (ENSPNAG00000008743)	narf (ENSPNAG00000008736)	cybc1 (ENSPNAG00000001175)	dnajb12b (ENSPNAG00000008719)	ddit4 (ENSPNAG00000001155)	anapc16 (ENSPNAG00000008680)	ascc1 (ENSPNAG00000008666)	SPOCK2 (ENSPNAG00000008632)	ENSPNAG00000001123	ppa1a (ENSPNAG00000008606)	ENSPNAG00000008587	KIF19 (ENSPNAG00000001096)	ABCA5 (ENSPNAG00000008549)	ENSPNAG00000008507	CDH18 (ENSPNAG00000008497)
Mexicana tetra	MODERN SPECIES	21	gch2 (ENSAMXG00000039949)	socs5a (ENSAMXG00000025122)	calm2b (ENSAMXG00000031853)	ENSAMXG00000015893	msh2 (ENSAMXG00000015880)	ENSAMXG00000011591	foxn2b (ENSAMXG00000040568)	fshr (ENSAMXG00000011613)	ENSAMXG00000011628	ENSAMXG00000041026	ENSAMXG00000036920	asb3 (ENSAMXG00000030442)	ENSAMXG00000011641	TMEM94 (ENSAMXG00000011661)	tdrkh (ENSAMXG00000011664)	MBTD1 (ENSAMXG00000011666) ##22	nherf1a (ENSAMXG00000011672)	narf (ENSAMXG00000011681)	cybc1 (ENSAMXG00000040081)	dnajb12b (ENSAMXG00000029998)	ddit4 (ENSAMXG00000042715)	anapc16 (ENSAMXG00000034010)	ascc1 (ENSAMXG00000011705)	SPOCK2 (ENSAMXG00000011715)	ENSAMXG00000034192	ppa1a (ENSAMXG00000035086)	ENSAMXG00000011727	KIF19 (ENSAMXG00000011728)	ENSAMXG00000011731	ENSAMXG00000011737	ENSAMXG00000033939
Electric eel	MODERN SPECIES	62	pigf (ENSEEEG00000016985)	cript (ENSEEEG00000016984)	gch2 (ENSEEEG00000016983)	calm2b (ENSEEEG00000016981)	ENSEEEG00000016980	msh2 (ENSEEEG00000016977)	ENSEEEG00000016499	foxn2b (ENSEEEG00000016493)	fshr (ENSEEEG00000016483)	ENSEEEG00000016452	ENSEEEG00000016447	asb3 (ENSEEEG00000016446)	ENSEEEG00000016441	TMEM94 (ENSEEEG00000016077)	tdrkh (ENSEEEG00000016061)	MBTD1 (ENSEEEG00000016060) ##22	nherf1a (ENSEEEG00000016059)	narf (ENSEEEG00000016043)	cybc1 (ENSEEEG00000016042)	dnajb12b (ENSEEEG00000016029)	ddit4 (ENSEEEG00000016026)	anapc16 (ENSEEEG00000016023)	ascc1 (ENSEEEG00000016020)	SPOCK2 (ENSEEEG00000016016)	ENSEEEG00000016008	ENSEEEG00000015918	KIF19 (ENSEEEG00000015888)	ENSEEEG00000015878
Channel catfish	MODERN SPECIES	4	cript (ENSIPUG00000008308)	gch2 (ENSIPUG00000008326)	socs5a (ENSIPUG00000008349)	CALM (ENSIPUG00000008361)	ENSIPUG00000008399	MSH2 (ENSIPUG00000008454)	fbxo11 (ENSIPUG00000008553)	foxn2 (ENSIPUG00000008720)	fshr (ENSIPUG00000008746)	ENSIPUG00000008972	ENSIPUG00000009365	asb3 (ENSIPUG00000009379)	ENSIPUG00000009393	tmem94 (ENSIPUG00000009480)	tdrkh (ENSIPUG00000009673)	mbtd1 (ENSIPUG00000009729) ##22	Slc9a3r1 (ENSIPUG00000009831)	narf (ENSIPUG00000009858)	c13h17orf62 (ENSIPUG00000009877)	dnajb12 (ENSIPUG00000009889)	ddit4 (ENSIPUG00000009920)	anapc16 (ENSIPUG00000009928)	ascc1 (ENSIPUG00000009943)	SPOCK2 (ENSIPUG00000010004)	sar1aa (ENSIPUG00000010046)	ppa1a (ENSIPUG00000010154)	dnai2a (ENSIPUG00000010195)	kif19 (ENSIPUG00000010228)	ENSIPUG00000010249	CDH10 (ENSIPUG00000010357)	ENSIPUG00000010429
Cyprinoidei	ANCESTRAL SPECIES	18	ENSGT00390000002373	ENSGT00940000157519.b.a	ENSGT00940000158348.e.a	ENSGT01030000234641.b.a.a	ENSGT00940000155737.b	ENSGT00940000157919.b	ENSGT00940000160317	ENSGT00940000157186.c	ENSGT00390000015375	ENSGT00390000004495	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181.c	ENSGT00940000153536.a.b.a.a	ENSGT00940000161333	ENSGT00940000159924.d	ENSGT00940000159339.sb.a.b.a.a	ENSGT00940000159339.sb.a.b.a.b	ENSGT00390000006009.a.a.a.c.a	ENSGT00940000159856	ENSGT00940000154322.A.a	ENSGT00980000198588
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	534									ENSGT00390000015375.l.a.b	ENSGT00390000004495.o.b	ENSGT00950000183187.B.e	ENSGT00950000182906.a.a.b.b	ENSGT00930000151032.B.a	ENSGT00390000016550.h.b	ENSGT00940000166206.a	ENSGT00940000153840.a.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b.i	ENSGT00940000153514.a.b.l	ENSGT00390000004691.i	ENSGT00940000157276.d.d	ENSGT00940000178264	ENSGT00940000158181.c.d	ENSGT00940000153536.a.b.a.a.d	ENSGT00940000161333.e.b	ENSGT00940000159924.d.b	ENSGT00940000159339.sb.a.b.a.b	ENSGT00390000006009.a.a.a.c.a.b	ENSGT00940000159856.b
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000157519.b.a.b	ENSGT00940000158348.e.a.b	ENSGT01030000234641.b.a.a.i	ENSGT00940000155737.b.k.a.a	ENSGT00940000155737.b.k.a.b	ENSGT00940000157919.b.l.b	ENSGT00940000160317.i	ENSGT00940000157186.c.a	ENSGT00390000015375.l.b	ENSGT00390000004495.o.b	ENSGT00950000183187.B.e	ENSGT00950000182906.a.a.b.b	ENSGT00930000151032.B.a	ENSGT00390000016550.h.b	ENSGT00940000166206.a	ENSGT00940000153840.a.a.a.a.a ##22	ENSGT00950000182849.B.c.b.b.i	ENSGT00940000153514.a.b.l	ENSGT00390000004691.i	ENSGT00940000157276.d.d	ENSGT00940000158181.c.d	ENSGT00940000153536.a.b.b.a.a	ENSGT00940000161333.e.a.a	ENSGT00940000159924.d.b	ENSGT00940000159339.sb.a.b.a.b.a	ENSGT00390000006009.a.a.a.c.a.b	ENSGT00940000159856.b	ENSGT00940000159856.a.b	ENSGT00940000154322.A.a	ENSGT00980000198588	ENSGT00940000156555.j.a
Common carp reference	MODERN SPECIES	44	PGS1 (ENSCCRG00000015942)	cyth1b (ENSCCRG00000046042)	timp2a (ENSCCRG00000070779)	sfxn2 (ENSCCRG00000045740)	arl3b (ENSCCRG00000067100)	trim8b (ENSCCRG00000060991)	mfsd13a (ENSCCRG00000045701)	SEMA4G (ENSCCRG00000003672)	mrpl43 (ENSCCRG00000082190)	twnk (ENSCCRG00000045687)	galk1 (ENSCCRG00000078603)	llgl2 (ENSCCRG00000017439)	ENSCCRG00000050539	ENSCCRG00000050525	tdrkh (ENSCCRG00000017983)	ENSCCRG00000017994 ##22	nherf1a (ENSCCRG00000062344)	narf (ENSCCRG00000050484)	cybc1 (ENSCCRG00000050477)	ccdc57 (ENSCCRG00000018531)	slc16a3b (ENSCCRG00000077320)	csnk1db (ENSCCRG00000050027)	c1qtnf1 (ENSCCRG00000060809)	RBFOX3 (ENSCCRG00000050022)	ENPP7 (ENSCCRG00000001941)	nog3 (ENSCCRG00000052832)	ENSCCRG00000015161	ENSCCRG00000070749	SMIM36 (ENSCCRG00000075308)	hlfb (ENSCCRG00000079279)	STXBP4 (ENSCCRG00000064525)
Golden-line barbel	MODERN SPECIES	35	cyth1b (ENSSGRG00000018705)	timp2a (ENSSGRG00000018704)	sfxn2 (ENSSGRG00000018457)	arl3b (ENSSGRG00000018455)	trim8b (ENSSGRG00000018454)	mfsd13a (ENSSGRG00000018445)	SEMA4G (ENSSGRG00000018443)	mrpl43 (ENSSGRG00000018442)	twnk (ENSSGRG00000018441)	galk1 (ENSSGRG00000018438)	llgl2 (ENSSGRG00000016644)	ENSSGRG00000016627	TMEM94 (ENSSGRG00000016562)	tdrkh (ENSSGRG00000016546)	ENSSGRG00000016544 ##22	MBTD1 (ENSSGRG00000016543) ##22	nherf1a (ENSSGRG00000016542)	narf (ENSSGRG00000016541)	cybc1 (ENSSGRG00000016540)	ccdc57 (ENSSGRG00000013383)	slc16a3b (ENSSGRG00000013317)	ENSSGRG00000013316	c1qtnf1 (ENSSGRG00000013313)	RBFOX3 (ENSSGRG00000013310)	ENPP7 (ENSSGRG00000013308)	nog3 (ENSSGRG00000013307)	ENSSGRG00000013303	ENSSGRG00000013294	hlfb (ENSSGRG00000013292)	ENSSGRG00000013286	cox11 (ENSSGRG00000013282)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	30	GPR142 (ENSCARG00000020496)	gprc5c (ENSCARG00000020482)	OXLD1 (ENSCARG00000020475)	pde6gb (ENSCARG00000020458)	nploc4 (ENSCARG00000020370)	ENSCARG00000020292	cep131 (ENSCARG00000019690)	ENSCARG00000019628	AATK (ENSCARG00000019625)	BAIAP2 (ENSCARG00000019562)	chmp6b (ENSCARG00000019535)	sec24c (ENSCARG00000015687)	camk2g1 (ENSCARG00000015606)	ENSCARG00000018789	TMEM94 (ENSCARG00000018606)	MBTD1 (ENSCARG00000018456) ##22	nherf1a (ENSCARG00000018415)	narf (ENSCARG00000018227)	cybc1 (ENSCARG00000018201)	ccdc57 (ENSCARG00000017806)	ENSCARG00000017708	slc16a3b (ENSCARG00000017691)	csnk1db (ENSCARG00000017107)	c1qtnf1 (ENSCARG00000017079)	RBFOX3 (ENSCARG00000017007)	ENPP7 (ENSCARG00000016986)	ANKFN1 (ENSCARG00000016969)	ENSCARG00000016953	hlfb (ENSCARG00000016946)	ENSCARG00000016930	ENSCARG00000016910
Goldfish	MODERN SPECIES	40	SART1 (ENSCARG00000069480)	hif1al2 (ENSCARG00000069520)	dpp3 (ENSCARG00000069533)	ENSCARG00000069574	rbm14a (ENSCARG00000069577)	actn3a (ENSCARG00000069582)	ENSCARG00000069586	ENSCARG00000069600	ENSCARG00000069601	SEMA4G (ENSCARG00000069603)	mrpl43 (ENSCARG00000069606)	twnk (ENSCARG00000069611)	llgl2 (ENSCARG00000069625)	ENSCARG00000069662	TMEM94 (ENSCARG00000069671)	MBTD1 (ENSCARG00000069705) ##22	nherf1a (ENSCARG00000069725)	narf (ENSCARG00000069745)	cybc1 (ENSCARG00000069755)	ccdc57 (ENSCARG00000069769)	slc16a3b (ENSCARG00000069821)	csnk1db (ENSCARG00000069829)	c1qtnf1 (ENSCARG00000069846)	RBFOX3 (ENSCARG00000069848)	ENSCARG00000069850	nf2b (ENSCARG00000069851)	ENSCARG00000069853	sdf2 (ENSCARG00000069856)	supt6h (ENSCARG00000069868)	ENSCARG00000069899	rpl23a (ENSCARG00000023797)
Cyprininae	ANCESTRAL SPECIES	65	ENSGT00940000158348.e.a.a	ENSGT01030000234641.b.a.a.j	ENSGT00940000155737.b.k.b	ENSGT00940000157919.b.l.a	ENSGT00940000160317.j	ENSGT00940000157186.c.b	ENSGT00390000015375.l.a.a	ENSGT00390000004495.p	ENSGT00390000015375.k	ENSGT00390000004495.o.a	ENSGT00950000183187.B.f	ENSGT00950000182906.a.a.b.a	ENSGT00930000151032.B.b	ENSGT00390000016550.h.a	ENSGT00940000166206.b	ENSGT00940000153840.a.a.a.a.b ##22	ENSGT00950000182849.B.c.b.b.j	ENSGT00940000153514.a.b.k	ENSGT00390000004691.j	ENSGT00940000157276.d.c	ENSGT00940000153251.b.b	ENSGT00940000158181.c.c	ENSGT00940000153536.a.b.a.a.c	ENSGT00940000161333.f	ENSGT00940000159924.d.a.a	ENSGT00940000159339.sb.a.b.a.a	ENSGT00390000006009.a.a.a.c.a.a	ENSGT00940000159856.a.a	ENSGT00940000159856.a.b	ENSGT00940000154322.A.a	ENSGT00980000198588
Cyprininae_a	ANCESTRAL SPECIES	18	ENSGT00390000002373.a	ENSGT00940000157519.b.a.a	ENSGT00940000158348.e.a.a	ENSGT01030000234641.b.a.a.j	ENSGT00940000155737.b.k.b	ENSGT00940000157919.b.l.a	ENSGT00940000160317.j	ENSGT00940000157186.c.b	ENSGT00390000015375.k	ENSGT00390000004495.o.a	ENSGT00950000183187.B.f	ENSGT00950000182906.a.a.b.a	ENSGT00930000151032.B.b	ENSGT00390000016550.h.a	ENSGT00940000166206.b	ENSGT00940000153840.a.a.a.a.b ##22	ENSGT00950000182849.B.c.b.b.j	ENSGT00940000153514.a.b.k	ENSGT00390000004691.j	ENSGT00940000157276.d.c	ENSGT00940000153251.b.b	ENSGT00940000158181.c.c	ENSGT00940000153536.a.b.a.a.c	ENSGT00940000161333.f	ENSGT00940000159924.d.a.a	ENSGT00940000159339.sb.a.b.a.a	ENSGT00390000006009.a.a.a.c.a.a	ENSGT00940000159856.a.a	ENSGT00940000156555.j.b	ENSGT00390000002226.a	ENSGT00390000007512.cb
Common carp reference	MODERN SPECIES	25	socs3b (ENSCCRG00000058455)	PGS1 (ENSCCRG00000078676)	cyth1b (ENSCCRG00000069110)	timp2a (ENSCCRG00000080732)	sfxn2 (ENSCCRG00000054413)	arl3b (ENSCCRG00000045821)	trim8b (ENSCCRG00000075803)	mfsd13a (ENSCCRG00000003682)	SEMA4G (ENSCCRG00000045695)	mrpl43 (ENSCCRG00000045690)	twnk (ENSCCRG00000054801)	llgl2 (ENSCCRG00000003363)	ENSCCRG00000050534	ENSCCRG00000017942	tdrkh (ENSCCRG00000050516)	ENSCCRG00000050495 ##22	nherf1a (ENSCCRG00000070072)	narf (ENSCCRG00000018013)	cybc1 (ENSCCRG00000018437)	ccdc57 (ENSCCRG00000064119)	CCDC57 (ENSCCRG00000022646)	slc16a3b (ENSCCRG00000022654)	csnk1db (ENSCCRG00000052711)	c1qtnf1 (ENSCCRG00000054899)	enpp7.2 (ENSCCRG00000053360)	ENSCCRG00000062056	nog3 (ENSCCRG00000059226)	ENSCCRG00000001958	ENSCCRG00000011521	hlfb (ENSCCRG00000061189)	ENSCCRG00000011527
Golden-line barbel	MODERN SPECIES	1025			timp2a (ENSSGRG00000024506)	sfxn2 (ENSSGRG00000024505)	arl3b (ENSSGRG00000024504)	trim8b (ENSSGRG00000024503)	mfsd13a (ENSSGRG00000024495)	SEMA4G (ENSSGRG00000024490)	mrpl43 (ENSSGRG00000024487)	twnk (ENSSGRG00000024483)	galk1 (ENSSGRG00000024478)	llgl2 (ENSSGRG00000024084)	ENSSGRG00000024075	TMEM94 (ENSSGRG00000023645)	tdrkh (ENSSGRG00000023622)	MBTD1 (ENSSGRG00000023346) ##22	nherf1a (ENSSGRG00000023343)	narf (ENSSGRG00000023274)	cybc1 (ENSSGRG00000023266)	ccdc57 (ENSSGRG00000021823)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	3	BTBD17 (ENSCARG00000050314)	map2k6 (ENSCARG00000050515)	camk2g1 (ENSCARG00000052826)	ENSCARG00000053979	csnk1db (ENSCARG00000054013)	slc16a3b (ENSCARG00000054111)	CCDC57 (ENSCARG00000054135)	SEMA4G (ENSCARG00000054161)	mrpl43 (ENSCARG00000054292)	twnk (ENSCARG00000054311)	galk1 (ENSCARG00000054335)	llgl2 (ENSCARG00000054544)	ENSCARG00000056729	TMEM94 (ENSCARG00000056879)	tdrkh (ENSCARG00000057681)	MBTD1 (ENSCARG00000057712) ##22	nherf1a (ENSCARG00000057832)	narf (ENSCARG00000057879)	cybc1 (ENSCARG00000057958)	ccdc57 (ENSCARG00000058124)	BAIAP2 (ENSCARG00000058966)	ENSCARG00000059071	cep131 (ENSCARG00000059114)	ENSCARG00000059832	ENSCARG00000059992	ENSCARG00000060229	nploc4 (ENSCARG00000060282)	pde6gb (ENSCARG00000061692)	OXLD1 (ENSCARG00000061712)	gprc5c (ENSCARG00000061725)	GPR142 (ENSCARG00000061745)
Goldfish	MODERN SPECIES	3	ENSCARG00000002887	BICRAL (ENSCARG00000002880)	tbcc (ENSCARG00000002872)	prph2a (ENSCARG00000002867)	qki2 (ENSCARG00000002842)	timm23a (ENSCARG00000002825)	zgc:112285 (ENSCARG00000002817)	ENSCARG00000002812	ENSCARG00000002804	si:dkey-21e13.3 (ENSCARG00000002792)	CNR2 (ENSCARG00000002789)	ENSCARG00000002754	ENSCARG00000002738	TMEM94 (ENSCARG00000002128)	tdrkh (ENSCARG00000062786)	MBTD1 (ENSCARG00000062707) ##22	pmp22b (ENSCARG00000062682)	TEKT3 (ENSCARG00000062664)	CDC42EP4 (ENSCARG00000062658)	ENSCARG00000062649	TEKT3 (ENSCARG00000062596)	pmp22b (ENSCARG00000062571)	hs3st3b1b (ENSCARG00000062556)	cox10 (ENSCARG00000062548)	ENSCARG00000062542	ENSCARG00000062481	ENSCARG00000062362	unk (ENSCARG00000062060)	ENSCARG00000062026	galr2a (ENSCARG00000062013)	KCNJ16 (ENSCARG00000062008)
Zebrafish	MODERN SPECIES	3	cyth1b (ENSDARG00000021488)	timp2a (ENSDARG00000061226)	sfxn2 (ENSDARG00000017960)	arl3b (ENSDARG00000071409)	ENSDARG00000109525	trim8b (ENSDARG00000060729)	mfsd13a (ENSDARG00000009214)	SEMA4G (ENSDARG00000088143)	mrpl43 (ENSDARG00000076334)	twnk (ENSDARG00000099900)	galk1 (ENSDARG00000028088)	llgl2 (ENSDARG00000023920)	ENSDARG00000074852	TMEM94 (ENSDARG00000074506)	tdrkh (ENSDARG00000053474)	MBTD1 (ENSDARG00000060868) ##22	nherf1a (ENSDARG00000000068)	narf (ENSDARG00000024184)	cybc1 (ENSDARG00000071414)	ccdc57 (ENSDARG00000087657)	slc16a3b (ENSDARG00000045051)	csnk1db (ENSDARG00000006125)	c1qtnf1 (ENSDARG00000088878)	RBFOX3 (ENSDARG00000010083)	enpp7.2 (ENSDARG00000053525)	enpp7.1 (ENSDARG00000053526)	nog3 (ENSDARG00000053528)	ANKFN1 (ENSDARG00000060941)	ENSDARG00000096800	SMIM36 (ENSDARG00000105527)	hlfb (ENSDARG00000061011)
Euteleosteomorpha	ANCESTRAL SPECIES	90	ENSGT00390000005895	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b	ENSGT01090000260051.b.a.b	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000162710.c.b	ENSGT00940000167780	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00940000167542	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000164189	ENSGT00940000176040	ENSGT00940000156854.s	ENSGT00940000154076.C.d
Acanthomorphata	ANCESTRAL SPECIES	131	ENSGT00910000147748	ENSGT00940000153536.a.b.b.a.b	ENSGT00940000158181.a	ENSGT00550000075089	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b	ENSGT00940000154003.B	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263515.a.b.a.b.b.k.b.a.a	ENSGT00390000005900	ENSGT00940000155309	ENSGT00940000155109.a.b	ENSGT00440000039001	ENSGT00390000013948.b
Euacanthomorphacea	ANCESTRAL SPECIES	34	ENSGT00940000158181.b	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT01070000253744.a.a.a.b.a.b	ENSGT00510000046608.A	ENSGT00940000160801	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b	ENSGT00940000154003.B	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT01100000263533.b.b.a.b.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Percomorphaceae	ANCESTRAL SPECIES	5										ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00400000022326.b.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00800000124060.B	ENSGT00940000158210.d	ENSGT00940000158794	ENSGT00390000000984	ENSGT00390000008657	ENSGT00940000158394.e	ENSGT00390000014082.a.b	ENSGT00940000153195.B	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00390000006705	ENSGT00940000157276.d	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Cyprinodontiformes	ANCESTRAL SPECIES	47	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154873	ENSGT00940000160801	ENSGT00950000182881.a.a.b.i.a	ENSGT00950000182910.b.g.a	ENSGT01080000257420.C.b.b.c.b	ENSGT00390000005900	ENSGT00940000155309	ENSGT00390000013948.b	ENSGT00440000039001	ENSGT00390000006705	ENSGT00940000157276.d	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Aplocheiloidei	ANCESTRAL SPECIES	276											ENSGT00440000039001	ENSGT00390000006705	ENSGT00940000157276.d	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Mangrove rivulus	MODERN SPECIES	335											tfam (ENSKMAG00000016147)	rab3gap1 (ENSKMAG00000016183)	ccdc57 (ENSKMAG00000016322)	TMEM94 (ENSKMAG00000016468)	tdrkh (ENSKMAG00000016638)	MBTD1 (ENSKMAG00000016688) ##22	nme2a (ENSKMAG00000016763)
Turquoise killifish	MODERN SPECIES	863																MBTD1 (ENSNFUG00015011931) ##22
Cyprinodontoidei	ANCESTRAL SPECIES	65	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154873	ENSGT00940000160801	ENSGT00950000182881.a.a.b.i.a	ENSGT00950000182910.b.g.a	ENSGT01080000257420.C.b.b.c.b	ENSGT00390000005900	ENSGT00940000155309	ENSGT00390000013948.b	ENSGT00440000039001	ENSGT00390000006705	ENSGT00940000157276.d	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00940000158951.e	ENSGT00940000163600.l	ENSGT00940000154596.b	ENSGT00840000130004	ENSGT00940000157605	ENSGT00940000155381	ENSGT00940000168282	ENSGT00940000158652	ENSGT00390000004713	ENSGT00940000163861.b	ENSGT00940000163144.a.a.a	ENSGT00940000161824	ENSGT00510000047886.a.a	ENSGT00940000164818.c.a	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00390000016550	ENSGT00940000157276.d	ENSGT00390000006705	ENSGT00440000039001	ENSGT00390000013948.b	ENSGT00940000155309	ENSGT00390000005900	ENSGT01080000257420.C.b.b.c.b	ENSGT00950000182910.b.g.a	ENSGT00950000182881.a.a.b.i.a	ENSGT00940000160801	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B	ENSGT00940000158962
Poecilia	ANCESTRAL SPECIES	15	ENSGT00940000163600.l	ENSGT00940000178666	ENSGT00940000154596.b	ENSGT00840000130004	ENSGT00940000157605	ENSGT00940000155381	ENSGT00940000168282	ENSGT00940000158652	ENSGT00390000004713	ENSGT00940000163861.b	ENSGT00940000163144.a.a.a	ENSGT00940000161824	ENSGT00510000047886.a.a	ENSGT00940000164818.c.a	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00390000016550	ENSGT00940000157276.d	ENSGT00390000006705	ENSGT00440000039001	ENSGT00390000013948.b	ENSGT00940000155309	ENSGT00390000005900	ENSGT01080000257420.C.b.b.c.b	ENSGT00950000182910.b.g.a	ENSGT00950000182881.a.a.b.i.a	ENSGT00940000160801	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B	ENSGT00940000158962
NAME_6	ANCESTRAL SPECIES		ENSGT00940000158951.e	ENSGT00940000163600.l	ENSGT00940000154596.b	ENSGT00840000130004	ENSGT00940000157605	ENSGT00940000155381	ENSGT00940000168282	ENSGT00940000158652	ENSGT00390000004713	ENSGT00940000163861.b	ENSGT00940000163144.a.a.a	ENSGT00940000161824	ENSGT00510000047886.a.a	ENSGT00940000164818.c.a	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00390000016550	ENSGT00940000157276.d	ENSGT00390000006705	ENSGT00440000039001	ENSGT00390000013948.b	ENSGT00940000155309	ENSGT00390000005900	ENSGT01080000257420.C.b.b.c.b	ENSGT00950000182910.b.g.a	ENSGT00950000182881.a.a.b.i.a	ENSGT00940000160801	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B	ENSGT00940000158962
Sailfin molly	MODERN SPECIES	1665											pvalb3 (ENSPLAG00000004101)	bhlha15 (ENSPLAG00000004109)	TECPR1 (ENSPLAG00000004148)	nme2a (ENSPLAG00000004177)	tdrkh (ENSPLAG00000004193)	MBTD1 (ENSPLAG00000004246) ##22	TMEM94 (ENSPLAG00000004262)
Amazon molly	MODERN SPECIES	256	dlx3b (ENSPFOG00000013899)	ENSPFOG00000013833	ENSPFOG00000013796	ENSPFOG00000013759	eif2ak1 (ENSPFOG00000013722)	PMS2 (ENSPFOG00000013622)	rsph10b (ENSPFOG00000013464)	dlgap5 (ENSPFOG00000013416)	ccz1 (ENSPFOG00000013364)	pvalb9 (ENSPFOG00000021837)	pvalb3 (ENSPFOG00000013254)	bhlha15 (ENSPFOG00000013242)	TECPR1 (ENSPFOG00000013231)	nme2a (ENSPFOG00000013046)	tdrkh (ENSPFOG00000013032)	MBTD1 (ENSPFOG00000012998) ##22	TMEM94 (ENSPFOG00000012805)	ccdc57 (ENSPFOG00000012370)	rab3gap1 (ENSPFOG00000011378)	tfam (ENSPFOG00000011152)	zgc:171971 (ENSPFOG00000011089)	ipmkb (ENSPFOG00000011046)	NAGLU (ENSPFOG00000010964)	NAGLU (ENSPFOG00000010949)	stat5b (ENSPFOG00000010905)	cavin1b (ENSPFOG00000010568)	ENSPFOG00000024842	atp6v0a1b (ENSPFOG00000010533)	rfng (ENSPFOG00000010243)	dcxr (ENSPFOG00000010173)	rac3b (ENSPFOG00000021912)
Guppy	MODERN SPECIES	449	dlx4b (ENSPREG00000004689)	dlx3b (ENSPREG00000004660)	ENSPREG00000004651	ENSPREG00000004645	eif2ak1 (ENSPREG00000004617)	PMS2 (ENSPREG00000004603)	rsph10b (ENSPREG00000004527)	dlgap5 (ENSPREG00000004478)	ccz1 (ENSPREG00000004429)	pvalb9 (ENSPREG00000004410)	pvalb3 (ENSPREG00000004400)	bhlha15 (ENSPREG00000004388)	TECPR1 (ENSPREG00000004319)	nme2a (ENSPREG00000004292)	tdrkh (ENSPREG00000004213)	MBTD1 (ENSPREG00000004175) ##22	TMEM94 (ENSPREG00000004033)	ccdc57 (ENSPREG00000003886)	rab3gap1 (ENSPREG00000003783)	tfam (ENSPREG00000003762)	ENSPREG00000003755	ipmkb (ENSPREG00000003742)	NAGLU (ENSPREG00000003730)	stat5b (ENSPREG00000003655)	cavin1b (ENSPREG00000003623)	atp6v0a1b (ENSPREG00000003535)	rfng (ENSPREG00000003496)	dcxr (ENSPREG00000003417)	rac3b (ENSPREG00000003381)	LRRC45 (ENSPREG00000003361)	trub1 (ENSPREG00000003343)
Platyfish	MODERN SPECIES	1	ENSXMAG00000028186	ENSXMAG00000014915	eif2ak1 (ENSXMAG00000014906)	ENSXMAG00000014911	PMS2 (ENSXMAG00000014877)	ENSXMAG00000029423	rsph10b (ENSXMAG00000014874)	dlgap5 (ENSXMAG00000014870)	ccz1 (ENSXMAG00000014852)	pvalb9 (ENSXMAG00000014851)	pvalb3 (ENSXMAG00000014664)	bhlha15 (ENSXMAG00000024592)	ENSXMAG00000014785	nme2a (ENSXMAG00000027226)	tdrkh (ENSXMAG00000014756)	MBTD1 (ENSXMAG00000014708) ##22	TMEM94 (ENSXMAG00000014670)	ccdc57 (ENSXMAG00000014598)	rab3gap1 (ENSXMAG00000014571)	tfam (ENSXMAG00000023857)	ENSXMAG00000014555	ipmkb (ENSXMAG00000014549)	NAGLU (ENSXMAG00000014537)	stat5b (ENSXMAG00000014535)	cavin1b (ENSXMAG00000014533)	atp6v0a1b (ENSXMAG00000014530)	rfng (ENSXMAG00000029644)	dcxr (ENSXMAG00000023626)	rac3b (ENSXMAG00000014734)	LRRC45 (ENSXMAG00000014712)	trub1 (ENSXMAG00000014701)
NAME_4	ANCESTRAL SPECIES	166	ENSGT00940000154003.B	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154873	ENSGT00940000160801	ENSGT00950000182881.a.a.b.i.a	ENSGT00950000182910.b.g.a	ENSGT01080000257420.C.b.b.c.b	ENSGT00390000005900	ENSGT00940000155309	ENSGT00390000013948.b	ENSGT00440000039001	ENSGT00390000006705	ENSGT00940000157276.d	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Mummichog	MODERN SPECIES	2362	trub1 (ENSFHEG00000004016)	LRRC45 (ENSFHEG00000004000)	rac3b (ENSFHEG00000003989)	dcxr (ENSFHEG00000003964)	rfng (ENSFHEG00000003950)	atp6v0a1b (ENSFHEG00000003941)	cavin1b (ENSFHEG00000003909)	stat5b (ENSFHEG00000003892)	NAGLU (ENSFHEG00000003824)	ipmkb (ENSFHEG00000003808)	ENSFHEG00000003803	rab3gap1 (ENSFHEG00000003790)	ccdc57 (ENSFHEG00000003747)	TMEM94 (ENSFHEG00000003651)	tdrkh (ENSFHEG00000003544)	MBTD1 (ENSFHEG00000003527) ##22	nme2a (ENSFHEG00000003473)	nudt13 (ENSFHEG00000003468)	ENSFHEG00000003460	noc3l (ENSFHEG00000003448)	ENSFHEG00000003374	zgc:153146 (ENSFHEG00000003334)
Sheepshead minnow	MODERN SPECIES	1672													ENSCVAG00000020176	rab3gap1 (ENSCVAG00000020239)	tdrkh (ENSCVAG00000020347)	MBTD1 (ENSCVAG00000020369) ##22	nme2a (ENSCVAG00000020387)
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B.f	ENSGT00940000158962	ENSGT00940000164435	ENSGT00940000161748	ENSGT00390000005739.a.b	ENSGT00800000124060.B	ENSGT00940000158210.d	ENSGT00940000158794	ENSGT00390000000984	ENSGT00390000008657	ENSGT00940000158394.e	ENSGT00390000014082.a.b	ENSGT00940000153195.B	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b
Oryzias_b	ANCESTRAL SPECIES	45	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B.f	ENSGT00940000158962	ENSGT00940000161748	ENSGT00390000005739.a.b	ENSGT00800000124060.B	ENSGT00940000158210.d	ENSGT00940000158794	ENSGT00390000000984	ENSGT00390000008657	ENSGT00940000158394.e	ENSGT00390000014082.a.b	ENSGT00940000153195.B	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT01070000253760.b.a.a.a.b.a.a.a.a.b	ENSGT00990000203619.A.b.b.b.a.f	ENSGT00940000158816.d	ENSGT00390000007512	ENSGT00940000166406	ENSGT00390000006705
Indian medaka	MODERN SPECIES	28	dcxr (ENSOMEG00000014479)	rac3b (ENSOMEG00000014502)	LRRC45 (ENSOMEG00000014535)	trub1 (ENSOMEG00000014556)	ENSOMEG00000000361	exoc6 (ENSOMEG00000014748)	cyp26a1 (ENSOMEG00000014802)	JMJD1C (ENSOMEG00000014854)	reep3b (ENSOMEG00000014919)	nrbf2b (ENSOMEG00000014948)	NHLRC3 (ENSOMEG00000014962)	egr2b (ENSOMEG00000014974)	adoa (ENSOMEG00000014983)	bms1 (ENSOMEG00000015042)	tdrkh (ENSOMEG00000015063)	MBTD1 (ENSOMEG00000015112) ##22	nme2a (ENSOMEG00000000383)	ENSOMEG00000015159	ca10a (ENSOMEG00000015201)	ENSOMEG00000015264	ENSOMEG00000015286	ENSOMEG00000015323	ENSOMEG00000015340	ENSOMEG00000015390	efhd1 (ENSOMEG00000015416)
Javanese ricefish	MODERN SPECIES	10	dcxr (ENSOJAG00000006784)	rac3b (ENSOJAG00000006807)	LRRC45 (ENSOJAG00000006981)	trub1 (ENSOJAG00000007327)	HHEX (ENSOJAG00000007367)	exoc6 (ENSOJAG00000007409)	cyp26a1 (ENSOJAG00000007644)	ENSOJAG00000007792	reep3b (ENSOJAG00000007798)	nrbf2b (ENSOJAG00000007807)	NHLRC3 (ENSOJAG00000007815)	egr2b (ENSOJAG00000007832)	adoa (ENSOJAG00000007839)	bms1 (ENSOJAG00000007855)	tdrkh (ENSOJAG00000008208)	MBTD1 (ENSOJAG00000008292) ##22	nme2a (ENSOJAG00000008373)	ca10a (ENSOJAG00000008416)	ENSOJAG00000008502	ENSOJAG00000008527	ENSOJAG00000008562	ENSOJAG00000008588	ENSOJAG00000008696	mrpl27 (ENSOJAG00000008747)	RAB37 (ENSOJAG00000008779)	nherf1a (ENSOJAG00000008841)	ENSOJAG00000008899	OXER1 (ENSOJAG00000008999)	CBX2 (ENSOJAG00000009009)	cox11 (ENSOJAG00000009027)	ENSOJAG00000009277
Oryzias_a	ANCESTRAL SPECIES	49	ENSGT00940000154873	ENSGT00940000153500.a.b.e.b.d	ENSGT00940000154003.B.f	ENSGT00940000158962	ENSGT00940000164435	ENSGT00390000005739.a.b	ENSGT00800000124060.B	ENSGT00940000158210.d	ENSGT00940000158794	ENSGT00390000000984	ENSGT00390000008657	ENSGT00940000158394.e	ENSGT00390000014082.a.b	ENSGT00940000153195.B	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b
Japanese Medaka HdrR	MODERN SPECIES	10	LRRC45 (ENSORLG00000002696)	trub1 (ENSORLG00000029719)	ENSORLG00000024913	exoc6 (ENSORLG00000014488)	cyp26a1 (ENSORLG00000014516)	JMJD1C (ENSORLG00000014554)	reep3b (ENSORLG00000014577)	ENSORLG00000024994	nrbf2b (ENSORLG00000014591)	NHLRC3 (ENSORLG00000024133)	egr2b (ENSORLG00000014600)	adoa (ENSORLG00000024889)	bms1 (ENSORLG00000014655)	tdrkh (ENSORLG00000029204)	ENSORLG00000029862	MBTD1 (ENSORLG00000014693) ##22	nme2a (ENSORLG00000014703)	ENSORLG00000024736	ENSORLG00000022692	ENSORLG00000026112	ENSORLG00000026658	ENSORLG00000028585	ENSORLG00000025266	ENSORLG00000023615	ca10a (ENSORLG00000024235)	ENSORLG00000025620	ENSORLG00000023083	ENSORLG00000026186	nherf1a (ENSORLG00000012182)	RAB37 (ENSORLG00000024558)	mrpl27 (ENSORLG00000014738)
Chinese medaka	MODERN SPECIES	406										reep3b (ENSOSIG00000021008)	nrbf2b (ENSOSIG00000020999)	egr2b (ENSOSIG00000020997)	adoa (ENSOSIG00000020995)	bms1 (ENSOSIG00000020988)	tdrkh (ENSOSIG00000020983)	MBTD1 (ENSOSIG00000020812) ##22	nme2a (ENSOSIG00000020789)
Ovalentaria_B	ANCESTRAL SPECIES	28	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000164664	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b
Pomacentridae	ANCESTRAL SPECIES	39	ENSGT00940000154322.B	ENSGT00940000158269.f.a	ENSGT00390000006167.g	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000164664	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b
Pomacentridae_A	ANCESTRAL SPECIES	198				ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000164664	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b
Amphiprion	ANCESTRAL SPECIES	207				ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000164664	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00390000017898.ab	ENSGT00940000155223.a.b	ENSGT00390000012959.a.g.b	ENSGT00390000014660	ENSGT00530000063937.a
Orange clownfish	MODERN SPECIES	10	SLC39A11 (ENSAPEG00000019134)	ENSAPEG00000019087	ENSAPEG00000019064	ENSAPEG00000019047	ENSAPEG00000019027	ENSAPEG00000018974	acbd4 (ENSAPEG00000018962)	PLCD3 (ENSAPEG00000018925)	galk1 (ENSAPEG00000018879)	ENSAPEG00000018916	ENSAPEG00000018838	llgl2 (ENSAPEG00000018698)	ENSAPEG00000018596	TMEM94 (ENSAPEG00000018466)	tdrkh (ENSAPEG00000018388)	MBTD1 (ENSAPEG00000018347) ##22	nme2a (ENSAPEG00000018325)	ENSAPEG00000018296	ca10a (ENSAPEG00000018251)	ENSAPEG00000018242	ENSAPEG00000018226	mrpl27 (ENSAPEG00000018214)	ENSAPEG00000018191	ENSAPEG00000018108	mettl9 (ENSAPEG00000018077)	KDELR2 (ENSAPEG00000018048)	ENSAPEG00000018020	ENSAPEG00000018001	wdr45b (ENSAPEG00000017950)	ENSAPEG00000017934	foxk2a (ENSAPEG00000017882)
Clown anemonefish	MODERN SPECIES	465								ENSAOCG00000020027	acbd4 (ENSAOCG00000020051)	PLCD3 (ENSAOCG00000020115)	galk1 (ENSAOCG00000020170)	llgl2 (ENSAOCG00000020244)	ENSAOCG00000020367	TMEM94 (ENSAOCG00000001517)	tdrkh (ENSAOCG00000020623)	MBTD1 (ENSAOCG00000020654) ##22
Spiny chromis	MODERN SPECIES	1755														TMEM94 (ENSAPOG00000012590)	tdrkh (ENSAPOG00000012653)	MBTD1 (ENSAPOG00000012734) ##22	nme2a (ENSAPOG00000012761)
Bicolor damselfish	MODERN SPECIES	843											galk1 (ENSSPAG00000005988)	llgl2 (ENSSPAG00000006035)	ENSSPAG00000006176	TMEM94 (ENSSPAG00000006232)	tdrkh (ENSSPAG00000006435)	MBTD1 (ENSSPAG00000006477) ##22	nme2a (ENSSPAG00000006577)	gapdhs (ENSSPAG00000006590)
Cichlidae	ANCESTRAL SPECIES	28	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000161899	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739.d	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Haplochromini	ANCESTRAL SPECIES	22	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000161899	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739.d	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Burton s mouthbrooder	MODERN SPECIES	983													ENSHBUG00000017797	TMEM94 (ENSHBUG00000017770)	tdrkh (ENSHBUG00000017609)	MBTD1 (ENSHBUG00000017594) ##22
Haplochromini_A	ANCESTRAL SPECIES	24	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000161899	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739.d	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
P. nyererei	MODERN SPECIES	543		CHRM3 (ENSPNYG00000022997)	ENSPNYG00000022981	ENSPNYG00000022953	ENSPNYG00000022948	ENSPNYG00000022938	ENSPNYG00000022923	ENSPNYG00000022919	acbd4 (ENSPNYG00000022913)	ENSPNYG00000022902	galk1 (ENSPNYG00000022891)	llgl2 (ENSPNYG00000022861)	ENSPNYG00000022845	TMEM94 (ENSPNYG00000022830)	tdrkh (ENSPNYG00000022818)	MBTD1 (ENSPNYG00000022802) ##22	nme2a (ENSPNYG00000022792)
Haplochromini_B	ANCESTRAL SPECIES	24	ENSGT00940000153195.B	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000157982.a.a	ENSGT00940000160739.d	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a
Eastern happy	MODERN SPECIES	20	CHRM3 (ENSACLG00000001933)	FMN2 (ENSACLG00000002087)	ENSACLG00000002176	ENSACLG00000002329	ENSACLG00000002338	ENSACLG00000002352	ENSACLG00000002410	ENSACLG00000002416	ENSACLG00000002483	galk1 (ENSACLG00000002486)	llgl2 (ENSACLG00000002511)	ENSACLG00000002647	ENSACLG00000002678	TMEM94 (ENSACLG00000002722)	tdrkh (ENSACLG00000003017)	MBTD1 (ENSACLG00000003044) ##22	nme2a (ENSACLG00000003079)
Zebra mbuna	MODERN SPECIES	5	ENSMZEG00005006088	ENSMZEG00005006093	ENSMZEG00005006097	ENSMZEG00005006116	ENSMZEG00005006125	ENSMZEG00005006142	ENSMZEG00005006173	ENSMZEG00005006234	acbd4 (ENSMZEG00005006260)	ENSMZEG00005006275	galk1 (ENSMZEG00005006321)	llgl2 (ENSMZEG00005006365)	ENSMZEG00005006444	TMEM94 (ENSMZEG00005006599)	tdrkh (ENSMZEG00005006755)	MBTD1 (ENSMZEG00005006779) ##22	nme2a (ENSMZEG00005006806)
Lyretail cichlid	MODERN SPECIES	371	bms1 (ENSNBRG00000023636)	mtr (ENSNBRG00000023647)	ENSNBRG00000023663	CHRM3 (ENSNBRG00000023688)	ENSNBRG00000023711	ENSNBRG00000023716	ENSNBRG00000023721	ENSNBRG00000023726	ENSNBRG00000023729	galk1 (ENSNBRG00000023741)	ENSNBRG00000023746	llgl2 (ENSNBRG00000023754)	ENSNBRG00000023762	TMEM94 (ENSNBRG00000023785)	tdrkh (ENSNBRG00000023815)	MBTD1 (ENSNBRG00000023825) ##22	nme2a (ENSNBRG00000023839)	ca10a (ENSNBRG00000023851)
Nile tilapia	MODERN SPECIES	20	ENSONIG00000032117	rab3gap1 (ENSONIG00000007311)	ccdc57 (ENSONIG00000007292)	ENSONIG00000039699	slc16a3b (ENSONIG00000007290)	CSNK1D (ENSONIG00000007288)	RBFOX3 (ENSONIG00000007282)	ENSONIG00000041067	ENSONIG00000042648	ENSONIG00000040162	ENSONIG00000029100	ENSONIG00000013582	TMEM94 (ENSONIG00000013584)	ENSONIG00000036709	tdrkh (ENSONIG00000033801)	MBTD1 (ENSONIG00000013591) ##22	ENSONIG00000037193	nme2a (ENSONIG00000030348)	ENSONIG00000035147	ca10a (ENSONIG00000019505)
Midas cichlid	MODERN SPECIES	113									galk1 (ENSACIG00000010012)	KCTD21 (ENSACIG00000010035)	llgl2 (ENSACIG00000010044)	ENSACIG00000010090	ENSACIG00000010227	TMEM94 (ENSACIG00000010250)	tdrkh (ENSACIG00000010318)	MBTD1 (ENSACIG00000010352) ##22	nme2a (ENSACIG00000010388)	pde6gb (ENSACIG00000010626)	ENSACIG00000010637	ENSACIG00000010647	nploc4 (ENSACIG00000010734)	ENSACIG00000010786	ENSACIG00000010850	cep131 (ENSACIG00000011329)	ENSACIG00000011501	ENSACIG00000011515	ENSACIG00000011541	ENSACIG00000011547	AATK (ENSACIG00000011557)	BAIAP2 (ENSACIG00000011602)	CHMP6 (ENSACIG00000011637)
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Anabantaria	ANCESTRAL SPECIES	29	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Climbing perch	MODERN SPECIES	10	ENSATEG00000023534	ENSATEG00000023545	ENSATEG00000023552	ENSATEG00000023556	ENSATEG00000023557	ENSATEG00000023570	acbd4 (ENSATEG00000023610)	ENSATEG00000023623	galk1 (ENSATEG00000023682)	ENSATEG00000023688	llgl2 (ENSATEG00000023693)	ENSATEG00000023715	ENSATEG00000023723	ENSATEG00000023734	tdrkh (ENSATEG00000023809)	ENSATEG00000023822 ##22	nme2a (ENSATEG00000023834)	ca10a (ENSATEG00000023844)	ENSATEG00000023857	mrpl27 (ENSATEG00000027531)	ENSATEG00000023865	ENSATEG00000023872	ENSATEG00000023875	ENSATEG00000023881	ENSATEG00000023883	ENSATEG00000025595	ENSATEG00000023895	ENSATEG00000023897	ENSATEG00000023905	ENSATEG00000026429	ENSATEG00000023921
Siamese fighting fish	MODERN SPECIES	9	ENSBSLG00000010526	CHRM3 (ENSBSLG00000013098)	ENSBSLG00000013164	ENSBSLG00000013261	ENSBSLG00000013272	tmem26b (ENSBSLG00000013300)	ENSBSLG00000013324	ARHGAP23 (ENSBSLG00000013351)	acbd4 (ENSBSLG00000013486)	PLCD3 (ENSBSLG00000013526)	galk1 (ENSBSLG00000014045)	KCTD21 (ENSBSLG00000014118)	llgl2 (ENSBSLG00000014202)	TMEM94 (ENSBSLG00000014739)	tdrkh (ENSBSLG00000004957)	MBTD1 (ENSBSLG00000005314) ##22	nme2a (ENSBSLG00000005939)	BAHCC1 (ENSBSLG00000006340)	SLC38A10 (ENSBSLG00000006551)	ndufaf8 (ENSBSLG00000006774)	TEPSIN (ENSBSLG00000006805)	ENSBSLG00000006863	AMZ2 (ENSBSLG00000006890)	slc16a6a (ENSBSLG00000006909)	arsg (ENSBSLG00000006921)	WIPI1 (ENSBSLG00000007007)	prkar1ab (ENSBSLG00000007141)	fam20a (ENSBSLG00000007794)	myof (ENSBSLG00000007991)	ENSBSLG00000008826	aarsd1 (ENSBSLG00000008829)
Zig-zag eel	MODERN SPECIES	10	ENSMAMG00000020628	ENSMAMG00000020622	ENSMAMG00000020617	ENSMAMG00000020600	c1qtnf1 (ENSMAMG00000020595)	CSNK1D (ENSMAMG00000020587)	slc16a3b (ENSMAMG00000020583)	ENSMAMG00000020563	ccdc57 (ENSMAMG00000020537)	ENSMAMG00000020512	ENSMAMG00000026900	galk1 (ENSMAMG00000020467)	llgl2 (ENSMAMG00000020434)	ENSMAMG00000020371	tdrkh (ENSMAMG00000020343)	ENSMAMG00000020308 ##22	ENSMAMG00000020300	nherf1a (ENSMAMG00000020295)	ENSMAMG00000020286	mrpl27 (ENSMAMG00000026506)	ENSMAMG00000020271	ca10a (ENSMAMG00000020268)	nme2a (ENSMAMG00000027961)	ENSMAMG00000020255	ENSMAMG00000020250	ENSMAMG00000025705	ENSMAMG00000020225	ENSMAMG00000020206	ENSMAMG00000020200	ENSMAMG00000020188	ENSMAMG00000020101
Carangaria	ANCESTRAL SPECIES	13	ENSGT00440000039001	ENSGT00390000013948.b	ENSGT00940000159339.sb.a	ENSGT00940000159924.c.a	ENSGT00940000153536.a.b.b.a.a	ENSGT00940000158181.b	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00390000006705	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00440000039001	ENSGT00390000013948.b	ENSGT00940000159339.sb.a	ENSGT00940000159924.c.a	ENSGT00940000153536.a.b.b.a.a	ENSGT00940000158181.b	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00390000006705	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Seriola	ANCESTRAL SPECIES	1	ENSGT00940000156416.c	ENSGT00390000015484.i.k	ENSGT00390000005232	ENSGT00940000155989.d	ENSGT00940000156169.a.a	ENSGT00390000014380.h.b.b.i.b.a.b	ENSGT00390000015792	ENSGT00950000183033.a.a.c.b.m.b	ENSGT00940000154704.d.a	ENSGT00940000158678	ENSGT00390000014563.a.a.a	ENSGT00390000015845	ENSGT00950000183195.b.b	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000176040	ENSGT00940000162720.b.a.a.a
Greater amberjack	MODERN SPECIES	27	ENSSDUG00000014526	ENSSDUG00000014518	bbs1 (ENSSDUG00000014497)	ENSSDUG00000014477	slc16a12b (ENSSDUG00000014455)	ENSSDUG00000014154	asah2 (ENSSDUG00000014075)	ENSSDUG00000014050	ENSSDUG00000013966	A1CF (ENSSDUG00000013930)	ENSSDUG00000013912	heatr1 (ENSSDUG00000013751)	arg1 (ENSSDUG00000013592)	TMEM94 (ENSSDUG00000013459)	tdrkh (ENSSDUG00000013393)	MBTD1 (ENSSDUG00000013361) ##22	nme2a (ENSSDUG00000013343)	ca10a (ENSSDUG00000013318)	ENSSDUG00000013292	mrpl27 (ENSSDUG00000013202)	RAB37 (ENSSDUG00000013162)	nherf1a (ENSSDUG00000013136)	CASKIN2 (ENSSDUG00000013064)	mettl9 (ENSSDUG00000013027)	kdelr2b (ENSSDUG00000013015)	ENSSDUG00000013002	ENSSDUG00000012984	wdr45b (ENSSDUG00000012960)	foxk2a (ENSSDUG00000012938)	ENSSDUG00000012927	ENSSDUG00000012922
Yellowtail amberjack	MODERN SPECIES	2805												heatr1 (ENSSLDG00000017083)	arg1 (ENSSLDG00000017337)	TMEM94 (ENSSLDG00000017367)	tdrkh (ENSSLDG00000017418)	MBTD1 (ENSSLDG00000017458) ##22
Barramundi perch	MODERN SPECIES	322	tfam (ENSLCAG00010017590)	ube2d1b (ENSLCAG00010017611)	ipmkb (ENSLCAG00010017621)	NAGLU (ENSLCAG00010017624)	stat5b (ENSLCAG00010017633)	cavin1b (ENSLCAG00010017646)	atp6v0a1b (ENSLCAG00010017658)	rfng (ENSLCAG00010017757)	dcxr (ENSLCAG00010017770)	rab3gap1 (ENSLCAG00010017795)	galk1 (ENSLCAG00010017864)	ENSLCAG00010017867	llgl2 (ENSLCAG00010017881)	ENSLCAG00010017895	TMEM94 (ENSLCAG00010017939)	MBTD1 (ENSLCAG00010018178) ##22	ENSLCAG00010018186	TNKS2 (ENSLCAG00010018196)	ENSLCAG00010018232	ENSLCAG00010018235	ENSLCAG00010018237
Pleuronectoidei	ANCESTRAL SPECIES	6															ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
Tongue sole	MODERN SPECIES	18	ENSCSEG00000002765	mettl9 (ENSCSEG00000002770)	kdelr2b (ENSCSEG00000002773)	ENSCSEG00000002779	ENSCSEG00000002787	wdr45b (ENSCSEG00000002792)	foxk2a (ENSCSEG00000002802)	ENSCSEG00000002805	nherf1a (ENSCSEG00000002810)	RAB37 (ENSCSEG00000002816)	ENSCSEG00000002848	mrpl27 (ENSCSEG00000002853)	ca10a (ENSCSEG00000002861)	nme2a (ENSCSEG00000002890)	tdrkh (ENSCSEG00000002894)	MBTD1 (ENSCSEG00000002904) ##22	TMEM94 (ENSCSEG00000002915)	DNAH3 (ENSCSEG00000002933)	PLCD3 (ENSCSEG00000002939)	acbd4 (ENSCSEG00000002961)	ARHGAP23 (ENSCSEG00000002974)	ENSCSEG00000003004	RSPH1 (ENSCSEG00000003009)	ENSCSEG00000003014	gas7a (ENSCSEG00000003030)	DNAH17 (ENSCSEG00000003040)	ENSCSEG00000003075	ENSCSEG00000003076	ENSCSEG00000003079	adprm (ENSCSEG00000003081)	map2k4b (ENSCSEG00000003085)
Turbot	MODERN SPECIES	9	ENSSMAG00000001020	LRRC45 (ENSSMAG00000001037)	rac3b (ENSSMAG00000001064)	dcxr (ENSSMAG00000001090)	rfng (ENSSMAG00000001119)	ATP6V0A1 (ENSSMAG00000001144)	CAVIN1 (ENSSMAG00000001236)	ENSSMAG00000001250	ENSSMAG00000001363	IPMK (ENSSMAG00000001386)	ENSSMAG00000033236	tfam (ENSSMAG00000001444)	ENSSMAG00000001465	ENSSMAG00000018773	ENSSMAG00000001532	ENSSMAG00000001602 ##22	nme2a (ENSSMAG00000021679)	ENSSMAG00000001659	ca10a (ENSSMAG00000001668)	ENSSMAG00000001674	mrpl27 (ENSSMAG00000001706)	ENSSMAG00000001802	ENSSMAG00000001817	ENSSMAG00000001911	ENSSMAG00000001925	ENSSMAG00000001978	ENSSMAG00000036060	ENSSMAG00000002049	ENSSMAG00000002073	ENSSMAG00000027508	ENSSMAG00000031434
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT01100000263521.a.a.b.a.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00400000022326.b.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510
Tetraodontidae	ANCESTRAL SPECIES	174											ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b
Fugu	MODERN SPECIES		VAT1 (ENSTRUG00000009364)	RND2 (ENSTRUG00000009210)	ENSTRUG00000009091	ENSTRUG00000008993	CHRM3 (ENSTRUG00000008654)	mtr (ENSTRUG00000008159)	bms1 (ENSTRUG00000008028)	ENSTRUG00000029443	galk1 (ENSTRUG00000007804)	llgl2 (ENSTRUG00000007245)	ENSTRUG00000027465	ENSTRUG00000023482	ENSTRUG00000027512	TMEM94 (ENSTRUG00000006680)	tdrkh (ENSTRUG00000006644)	MBTD1 (ENSTRUG00000006077) ##22	nme2a (ENSTRUG00000005969)	ca10a (ENSTRUG00000003350)	ENSTRUG00000029862	ENSTRUG00000027292	ENSTRUG00000030599	ENSTRUG00000027871	NAGLU (ENSTRUG00000003631)	ipmkb (ENSTRUG00000022780)	mct4b (ENSTRUG00000004141)	ccdc57 (ENSTRUG00000004461)	rab3gap1 (ENSTRUG00000005671)	METTL9 (ENSTRUG00000006220)	kdelr2b (ENSTRUG00000021887)	ENSTRUG00000026133	ENSTRUG00000030082
Tetraodon	MODERN SPECIES	26	ENSTNIG00000019383	ENSTNIG00000019382	ENSTNIG00000000519	ENSTNIG00000019381	ENSTNIG00000019380	ENSTNIG00000019568	ENSTNIG00000005702	mtr (ENSTNIG00000005701)	bms1 (ENSTNIG00000006216)	ENSTNIG00000006217	KCTD21 (ENSTNIG00000000545)	galk1 (ENSTNIG00000002747)	llgl2 (ENSTNIG00000002746)	TMEM94 (ENSTNIG00000003158)	tdrkh (ENSTNIG00000003157)	MBTD1 (ENSTNIG00000003156) ##22	nme2a (ENSTNIG00000003155)	prdm1a (ENSTNIG00000003926)	atg5 (ENSTNIG00000005260)	dctn3 (ENSTNIG00000005259)	nt5c3a (ENSTNIG00000005258)	BBS9 (ENSTNIG00000005257)	bmper (ENSTNIG00000012990)	eaf1 (ENSTNIG00000012989)	mettl6 (ENSTNIG00000012988)	sh3bp5b (ENSTNIG00000012987)	capn7 (ENSTNIG00000012986)	ENSTNIG00000012985	mef2d (ENSTNIG00000012984)	rhbg (ENSTNIG00000012983)	hapln2 (ENSTNIG00000012982)
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT01100000263521.a.a.b.a.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00400000022326.b.a.b.a.b	ENSGT00840000130048.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510
Ballan wrasse	MODERN SPECIES	5	JMJD1C (ENSLBEG00000026391)	cyp26a1 (ENSLBEG00000026462)	exoc6 (ENSLBEG00000026550)	ENSLBEG00000026681	trub1 (ENSLBEG00000026722)	LRRC45 (ENSLBEG00000026744)	ENSLBEG00000026761	ARHGAP23 (ENSLBEG00000026848)	acbd4 (ENSLBEG00000027007)	PLCD3 (ENSLBEG00000027029)	galk1 (ENSLBEG00000027058)	llgl2 (ENSLBEG00000027089)	ENSLBEG00000027138	TMEM94 (ENSLBEG00000027209)	tdrkh (ENSLBEG00000027323)	MBTD1 (ENSLBEG00000027374) ##22	nme2a (ENSLBEG00000027439)	ca10a (ENSLBEG00000027462)	ENSLBEG00000027502	mrpl27 (ENSLBEG00000027521)	RAB37 (ENSLBEG00000027539)	nherf1a (ENSLBEG00000027557)	CASKIN2 (ENSLBEG00000027576)	kdelr2b (ENSLBEG00000027602)	mettl9 (ENSLBEG00000027618)	ENSLBEG00000027630	ENSLBEG00000027641	wdr45b (ENSLBEG00000027663)	foxk2a (ENSLBEG00000027681)	ENSLBEG00000027688	ENSLBEG00000027699
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT01100000263521.a.a.b.a.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT01100000263521.a.a.b.a.a	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00940000161899	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00390000014794.b.k	ENSGT00940000165236	ENSGT00940000154715.b	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.a	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s
European seabass	MODERN SPECIES	11	ENSDLAG00005032188	ENSDLAG00005033421	ENSDLAG00005031614	ENSDLAG00005027087	ENSDLAG00005031374	ENSDLAG00005031752	ENSDLAG00005009990	acbd4 (ENSDLAG00005009970)	ENSDLAG00005009597	galk1 (ENSDLAG00005009580)	ENSDLAG00005027147	llgl2 (ENSDLAG00005006425)	ENSDLAG00005006204	ENSDLAG00005004293	tdrkh (ENSDLAG00005004120)	ENSDLAG00005003797 ##22	nme2a (ENSDLAG00005003770)	ENSDLAG00005028828	ca10a (ENSDLAG00005003685)	ENSDLAG00005003669	mrpl27 (ENSDLAG00005003652)	ENSDLAG00005030652	ENSDLAG00005003020	ENSDLAG00005002606	ENSDLAG00005031271	ENSDLAG00005026917	ENSDLAG00005016311	ENSDLAG00005016281	ENSDLAG00005033237	ENSDLAG00005015984	ENSDLAG00005015982
Large yellow croaker	MODERN SPECIES	488	NHLRC3 (ENSLCRG00005018827)	egr2b (ENSLCRG00005018829)	adoa (ENSLCRG00005018830)	bms1 (ENSLCRG00005018835)	mtr (ENSLCRG00005018908)	ENSLCRG00005020046	ENSLCRG00005023600	ENSLCRG00005023603	ENSLCRG00005023604	galk1 (ENSLCRG00005023606)	ENSLCRG00005023608	llgl2 (ENSLCRG00005023614)	ENSLCRG00005006268	TMEM94 (ENSLCRG00005006271)	tdrkh (ENSLCRG00005006283)	MBTD1 (ENSLCRG00005006294) ##22	nme2a (ENSLCRG00005006397)	ENSLCRG00005006403	ENSLCRG00005006404	ENSLCRG00005006405	ENSLCRG00005006406	ca10a (ENSLCRG00005006408)	ENSLCRG00005006412	ENSLCRG00005006414	ENSLCRG00005006415	mrpl27 (ENSLCRG00005006416)	RAB37 (ENSLCRG00005006424)	nherf1a (ENSLCRG00005006611)	CASKIN2 (ENSLCRG00005006614)	ENSLCRG00005006621	kdelr2b (ENSLCRG00005006622)
Gilthead seabream	MODERN SPECIES	12	ENSSAUG00010010843	ENSSAUG00010010841	ENSSAUG00010010840	tmem26b (ENSSAUG00010010839)	ENSSAUG00010010837	ENSSAUG00010010836	ARHGAP23 (ENSSAUG00010010832)	acbd4 (ENSSAUG00010010829)	PLCD3 (ENSSAUG00010010748)	ENSSAUG00010010740	galk1 (ENSSAUG00010010738)	llgl2 (ENSSAUG00010007400)	ENSSAUG00010007324	TMEM94 (ENSSAUG00010002847)	tdrkh (ENSSAUG00010012859)	MBTD1 (ENSSAUG00010012854) ##22	nme2a (ENSSAUG00010012850)	ENSSAUG00010012848	ca10a (ENSSAUG00010012841)	ENSSAUG00010012839	mrpl27 (ENSSAUG00010012835)	RAB37 (ENSSAUG00010012682)	nherf1a (ENSSAUG00010012676)	CASKIN2 (ENSSAUG00010012653)	ENSSAUG00010012635	mettl9 (ENSSAUG00010012631)	kdelr2b (ENSSAUG00010012628)	ENSSAUG00010012623	wdr45b (ENSSAUG00010012605)	foxk2a (ENSSAUG00010012597)	ENSSAUG00010012594
Perciformes	ANCESTRAL SPECIES	9	ENSGT01030000235112	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000154715.b	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s	ENSGT00940000154076.C.d
Cottioidei	ANCESTRAL SPECIES	38	ENSGT00940000154906.C.d	ENSGT00940000160084.h	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000154715.b	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00940000157510	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.b	ENSGT00400000022326.b.a.b.a.b	ENSGT00390000004010.a.b.a.b	ENSGT00390000013648	ENSGT01100000263520.a.a.a.b.a.a	ENSGT00940000155709.i
Lumpfish	MODERN SPECIES	10	ENSCLMG00005021359	ENSCLMG00005021360	ENSCLMG00005021361	ENSCLMG00005021362	ENSCLMG00005021363	ARHGAP23 (ENSCLMG00005021364)	acbd4 (ENSCLMG00005021367)	PLCD3 (ENSCLMG00005021368)	galk1 (ENSCLMG00005021369)	ENSCLMG00005021370	ENSCLMG00005021371	llgl2 (ENSCLMG00005021386)	ENSCLMG00005022277	TMEM94 (ENSCLMG00005022281)	tdrkh (ENSCLMG00005022371)	MBTD1 (ENSCLMG00005022373) ##22	nme2a (ENSCLMG00005022374)	ENSCLMG00005022375	ca10a (ENSCLMG00005022377)	ENSCLMG00005022378	ENSCLMG00005022379	mrpl27 (ENSCLMG00005022382)	ENSCLMG00005022383	NHERF1 (ENSCLMG00005022385)	ENSCLMG00005022386	wdr45b (ENSCLMG00005022388)	ENSCLMG00005001521	ENSCLMG00005001534	ENSCLMG00005001550	mettl9 (ENSCLMG00005001571)	ENSCLMG00005001584
Stickleback	MODERN SPECIES	425	CHRM3 (ENSGACG00000015318)	ENSGACG00000015314	ENSGACG00000015313	ENSGACG00000015311	ENSGACG00000015309	gahce1 (ENSGACG00000015307)	ARHGAP23 (ENSGACG00000015304)	acbd4 (ENSGACG00000015293)	PLCD3 (ENSGACG00000015291)	ENSGACG00000015290	galk1 (ENSGACG00000015288)	llgl2 (ENSGACG00000015280)	ENSGACG00000015269	TMEM94 (ENSGACG00000015266)	tdrkh (ENSGACG00000015258)	MBTD1 (ENSGACG00000015256) ##22	nme2a (ENSGACG00000015247)	ENSGACG00000015246	ca10a (ENSGACG00000015243)	ENSGACG00000015242	mrpl27 (ENSGACG00000015241)	RAB37 (ENSGACG00000015233)	NHERF1 (ENSGACG00000015228)	ENSGACG00000015227	wdr45b (ENSGACG00000015215)	ENSGACG00000015214	ENSGACG00000015212	kdelr2b (ENSGACG00000015202)	mettl9 (ENSGACG00000015195)	foxk2a (ENSGACG00000015190)
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00940000160084.h	ENSGT01030000235112	ENSGT00940000154289.B.e.b	ENSGT00940000160595.a.b	ENSGT00940000160175.a	ENSGT00940000165236	ENSGT00940000154715.b	ENSGT00940000157982.a.a	ENSGT00940000160739	ENSGT00940000156993.c	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.b	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158883.b	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g	ENSGT00390000013648	ENSGT00390000004010.a.b.a.b	ENSGT00940000162287.B.a.d.b	ENSGT00940000157510	ENSGT00940000155709.i	ENSGT00940000162720.b.a.a.a	ENSGT00940000156854.s	ENSGT00940000154076.C.d
Pike perch	MODERN SPECIES	43	ENSSLUG00000023564	ENSSLUG00000001518	ENSSLUG00000001542	ENSSLUG00000001550	ENSSLUG00000001555	ENSSLUG00000001597	ENSSLUG00000001618	acbd4 (ENSSLUG00000001638)	PLCD3 (ENSSLUG00000001659)	galk1 (ENSSLUG00000001675)	KCTD21 (ENSSLUG00000001689)	llgl2 (ENSSLUG00000002034)	ENSSLUG00000004360	TMEM94 (ENSSLUG00000004506)	tdrkh (ENSSLUG00000006258)	MBTD1 (ENSSLUG00000006278) ##22	nme2a (ENSSLUG00000006293)	ENSSLUG00000006300	ca10a (ENSSLUG00000006306)	ENSSLUG00000006328	mrpl27 (ENSSLUG00000006343)	RAB37 (ENSSLUG00000006357)	NHERF1 (ENSSLUG00000006366)	ENSSLUG00000006379	mettl9 (ENSSLUG00000006427)	kdelr2b (ENSSLUG00000006435)	ENSSLUG00000006441	wdr45b (ENSSLUG00000006451)	foxk2a (ENSSLUG00000006468)	ENSSLUG00000006495	ENSSLUG00000006500
Channel bull blenny	MODERN SPECIES	10	ENSCGOG00000011947	RBFOX3 (ENSCGOG00000011949)	CSNK1D (ENSCGOG00000011956)	slc16a3b (ENSCGOG00000012049)	gas7a (ENSCGOG00000012065)	ENSCGOG00000012434	ENSCGOG00000012442	ARHGAP23 (ENSCGOG00000012444)	acbd4 (ENSCGOG00000012452)	PLCD3 (ENSCGOG00000012495)	galk1 (ENSCGOG00000013434)	ENSCGOG00000013437	llgl2 (ENSCGOG00000013504)	TMEM94 (ENSCGOG00000015743)	tdrkh (ENSCGOG00000016414)	MBTD1 (ENSCGOG00000016430) ##22	nme2a (ENSCGOG00000016878)	ENSCGOG00000016887	ENSCGOG00000016889	ENSCGOG00000016891	ENSCGOG00000016893	ENSCGOG00000016896	ENSCGOG00000016900	ca10a (ENSCGOG00000016903)	ENSCGOG00000016927	mrpl27 (ENSCGOG00000016931)	RAB37 (ENSCGOG00000016945)	nherf1a (ENSCGOG00000017032)	CASKIN2 (ENSCGOG00000017034)	mettl9 (ENSCGOG00000017040)	kdelr2b (ENSCGOG00000017042)
Tiger tail seahorse	MODERN SPECIES	339															ENSHCOG00000009639	MBTD1 (ENSHCOG00000009615) ##22	ca10a (ENSHCOG00000009575)	ENSHCOG00000000296	llgl2 (ENSHCOG00000009498)	galk1 (ENSHCOG00000009393)	sult2st2 (ENSHCOG00000009362)	ENSHCOG00000009352	ENSHCOG00000009294	WFIKKN2 (ENSHCOG00000009234)	TOB1 (ENSHCOG00000009219)	SPAG9 (ENSHCOG00000009203)
Pinecone sodierfish	MODERN SPECIES	10	ipmkb (ENSMMDG00005023936)	NAGLU (ENSMMDG00005023934)	PLCD3 (ENSMMDG00005023932)	ENSMMDG00005023931	ENSMMDG00005023928	ENSMMDG00005023924	stat5b (ENSMMDG00005023889)	cavin1b (ENSMMDG00005023875)	atp6v0a1b (ENSMMDG00005023871)	ENSMMDG00005023867	galk1 (ENSMMDG00005023866)	llgl2 (ENSMMDG00005023747)	ENSMMDG00005023699	TMEM94 (ENSMMDG00005023505)	tdrkh (ENSMMDG00005023487)	MBTD1 (ENSMMDG00005023470) ##22	nme2a (ENSMMDG00005023463)	ca10a (ENSMMDG00005023462)	ENSMMDG00005023461	ENSMMDG00005023458	mrpl27 (ENSMMDG00005023456)	RAB37 (ENSMMDG00005023439)	nherf1a (ENSMMDG00005023436)	ENSMMDG00005023434	ENSMMDG00005023431	mettl9 (ENSMMDG00005023429)	kdelr2b (ENSMMDG00005023427)	ENSMMDG00005023426	ENSMMDG00005023422	ENSMMDG00005023420	wdr45b (ENSMMDG00005023418)
Cod	MODERN SPECIES	9	ENSGMOG00000029683	ENSGMOG00000035833	ENSGMOG00000015819	ENSGMOG00000015839	ENSGMOG00000000388	rfng (ENSGMOG00000000374)	dcxr (ENSGMOG00000000365)	rac3b (ENSGMOG00000007736)	LRRC45 (ENSGMOG00000000342)	ENSGMOG00000009466	galk1 (ENSGMOG00000009452)	llgl2 (ENSGMOG00000009425)	ENSGMOG00000022376	ENSGMOG00000009320	tdrkh (ENSGMOG00000009304)	ENSGMOG00000009288 ##22	nme2a (ENSGMOG00000009283)	ENSGMOG00000036572	mrpl27 (ENSGMOG00000035435)	ENSGMOG00000000529	ENSGMOG00000000520	ENSGMOG00000014552	ENSGMOG00000017709	ENSGMOG00000035855	ENSGMOG00000009753	ATP6V0A1 (ENSGMOG00000014100)	CAVIN1 (ENSGMOG00000025922)	ENSGMOG00000014154	ENSGMOG00000035667	acbd4 (ENSGMOG00000000622)	ENSGMOG00000000575
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00390000005895.g	ENSGT01030000234534.C	ENSGT00390000005895.h	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000162710.c.b	ENSGT00940000167780	ENSGT00950000183187.B	ENSGT00940000160906	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000179984	ENSGT00940000155223.a.b	ENSGT00940000156964.A	ENSGT00940000156505.s	ENSGT00940000157054.c.b	ENSGT00940000167489	ENSGT00940000159766	ENSGT00940000162058	ENSGT00940000157303.f	ENSGT00940000155310.b	ENSGT00390000001094.y.a	ENSGT01030000234528.A.a.b	ENSGT00940000160819
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	360	ENSGT01030000234534.C	ENSGT00940000156819.a.b.j	ENSGT00940000159664.f.a	ENSGT00390000004836	ENSGT00940000167780	ENSGT00940000160906.d	ENSGT00950000182906.a.a.b.h	ENSGT00930000151032.B.d.b	ENSGT00390000016550.c	ENSGT00940000153222.a.b.a	ENSGT00940000155286.m.b	ENSGT01030000234586.A.a.a.b.g	ENSGT00940000154311.a.b.cb.a.b.a	ENSGT00940000158837.g.b.a	ENSGT00940000158837.g.a.a	ENSGT00940000153840.a.a.a.a.c ##22	ENSGT00940000164818.c.a.f.b	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.b	ENSGT00940000155223.a.b.c.a
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT00940000156819.a.b.j	ENSGT00940000159664.f.a	ENSGT00390000004836	ENSGT00940000167780	ENSGT00940000160906.d	ENSGT00950000182906.a.a.b.h	ENSGT00930000151032.B.d.b	ENSGT00390000016550.c	ENSGT00940000158837.g.b.a	ENSGT00940000180096.b	ENSGT00940000153222.a.b.a	ENSGT00940000155286.m.b	ENSGT01030000234586.A.a.a.b.g	ENSGT00940000154311.a.b.cb.a.b.a	ENSGT00940000158837.g.a.a	ENSGT00940000153840.a.a.a.a.c ##22	ENSGT00940000164818.c.a.f.b	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.b	ENSGT00940000155223.a.b.c.a	ENSGT00940000156964.A.f	ENSGT00940000156505.s.h	ENSGT00940000157054.c.b.e	ENSGT01000000220278	ENSGT00940000159766.i.a	ENSGT00940000162058.a	ENSGT00940000157303.f.f	ENSGT00940000155310.b.a	ENSGT00390000001094.y.a	ENSGT01030000234528.A.a.b.b	ENSGT00940000160819	ENSGT01040000240385.A.b.b.a.a.a.a.a.a
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00940000153514.a.b.q.b	ENSGT00390000004691.g	ENSGT00390000014852.a	ENSGT00390000005895.g	ENSGT01030000234534.C	ENSGT00940000156819.a.b.j	ENSGT00940000159664.f.a	ENSGT00390000004836	ENSGT00940000167780	ENSGT00940000160906.d	ENSGT00950000182906.a.a.b.h	ENSGT00930000151032.B.d.b	ENSGT00390000016550.c	ENSGT00940000158837.g.b.a	ENSGT00940000158837.g.a.a	ENSGT00940000153840.a.a.a.a.c ##22	ENSGT00940000164818.c.a.f.b	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.b	ENSGT00940000155223.a.b.c.a	ENSGT00940000156964.A.f	ENSGT00940000156505.s.h	ENSGT00940000157054.c.b.e	ENSGT01000000220278	ENSGT00940000159766.i.a	ENSGT00940000162058.a	ENSGT00940000157303.f.f	ENSGT00940000155310.b.a	ENSGT00390000001094.y.a	ENSGT01030000234528.A.a.b.b	ENSGT00940000160819	ENSGT01040000240385.A.b.b.a.a.a.a.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00390000004691.g	ENSGT00390000014852.a	ENSGT00390000005895.g	ENSGT01030000234534.C	ENSGT00940000156819.a.b.j	ENSGT00940000159664.f.a	ENSGT00390000004836	ENSGT00940000167780	ENSGT01010000229526	ENSGT00940000160906.d	ENSGT00950000182906.a.a.b.h	ENSGT00930000151032.B.d.b	ENSGT00390000016550.c	ENSGT00940000158837.g.b.a	ENSGT00940000158837.g.a.a	ENSGT00940000153840.a.a.a.a.c ##22	ENSGT00940000164818.c.a.f.b	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.b	ENSGT00940000155223.a.b.c.a	ENSGT00940000156964.A.f	ENSGT00940000156505.s.h	ENSGT00940000157054.c.b.e	ENSGT01000000220278	ENSGT00940000159766.i.a	ENSGT00940000162058.a	ENSGT00940000157303.f.f	ENSGT00940000155310.b.a	ENSGT00390000001094.y.a	ENSGT01030000234528.A.a.b.b	ENSGT00940000160819	ENSGT01040000240385.A.b.b.a.a.a.a.a.a
Chinook salmon	MODERN SPECIES	17	cybc1 (ENSOTSG00005031175)	hexdc (ENSOTSG00005031168)	ogfod3 (ENSOTSG00005031164)	ENSOTSG00005031162	ENSOTSG00005031161	CACNA1G (ENSOTSG00005031157)	SPATA20 (ENSOTSG00005030848)	ENSOTSG00005030847	ENSOTSG00005030846	KCTD21 (ENSOTSG00005030845)	llgl2 (ENSOTSG00005030456)	ENSOTSG00005030446	TMEM94 (ENSOTSG00005030342)	ENSOTSG00005030339	ENSOTSG00005030338	MBTD1 (ENSOTSG00005030305) ##22	ENSOTSG00005030300	ENSOTSG00005030290	ca10a (ENSOTSG00005030274)	GRIN2C (ENSOTSG00005030273)	rgs9b (ENSOTSG00005030038)	ENSOTSG00005030036	ENSOTSG00005030035	BICRAL (ENSOTSG00005030032)	tbcc (ENSOTSG00005030031)	prph2a (ENSOTSG00005030029)	ENSOTSG00005030026	timm23a (ENSOTSG00005030025)	zgc:112285 (ENSOTSG00005030024)	ENSOTSG00005030023	ENSOTSG00005030022
Coho salmon	MODERN SPECIES	17	ogfod3 (ENSOKIG00005044548)	ENSOKIG00005044542	ENSOKIG00005044519	CACNA1G (ENSOKIG00005043760)	ENSOKIG00005043691	SPATA20 (ENSOKIG00005042907)	ENSOKIG00005042565	ENSOKIG00005042548	ENSOKIG00005042518	KCTD21 (ENSOKIG00005042509)	llgl2 (ENSOKIG00005038793)	ENSOKIG00005038632	TMEM94 (ENSOKIG00005036902)	ENSOKIG00005036781	ENSOKIG00005036736	MBTD1 (ENSOKIG00005035991) ##22	ENSOKIG00005035896	ENSOKIG00005035773	ca10a (ENSOKIG00005035602)	GRIN2C (ENSOKIG00005035454)	ENSOKIG00005035412	GNA13 (ENSOKIG00005035295)	ENSOKIG00005035265	BICRAL (ENSOKIG00005035237)	tbcc (ENSOKIG00005035200)	prph2a (ENSOKIG00005035176)	ENSOKIG00005035152	timm23a (ENSOKIG00005035059)	zgc:112285 (ENSOKIG00005035048)	ENSOKIG00005035031	ENSOKIG00005035022
Rainbow trout	MODERN SPECIES	12	ogfod3 (ENSOMYG00000012520)	ENSOMYG00000051933	ENSOMYG00000012533	ENSOMYG00000069299	ENSOMYG00000012557	ENSOMYG00000012664	ENSOMYG00000013427	ENSOMYG00000068881	ENSOMYG00000014501	ENSOMYG00000063926	ENSOMYG00000014591	llgl2 (ENSOMYG00000014641)	ENSOMYG00000014789	ENSOMYG00000015076	ENSOMYG00000017750	ENSOMYG00000017790 ##22	ENSOMYG00000017852	ENSOMYG00000017874	ENSOMYG00000067132	ENSOMYG00000017920	ENSOMYG00000017996	ENSOMYG00000018162	ENSOMYG00000019278	ENSOMYG00000019315	BICRAL (ENSOMYG00000019318)	ENSOMYG00000052573	tbcc (ENSOMYG00000019323)	prph2a (ENSOMYG00000019328)	ENSOMYG00000019335	timm23a (ENSOMYG00000019351)	zgc:112285 (ENSOMYG00000019372)
Salmo	ANCESTRAL SPECIES	31	ENSGT00390000004691.g	ENSGT00390000014852.a	ENSGT00390000005895.g	ENSGT01030000234534.C	ENSGT00940000156819.a.b.j	ENSGT00990000212798	ENSGT00940000159664.f.a	ENSGT00390000004836	ENSGT00940000167780	ENSGT00940000160906.d	ENSGT00950000182906.a.a.b.h	ENSGT00930000151032.B.d.b	ENSGT00390000016550.c	ENSGT00940000158837.g.b.a	ENSGT00940000158837.g.a.a	ENSGT00940000153840.a.a.a.a.c ##22	ENSGT00940000164818.c.a.f.b	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.b	ENSGT00940000155223.a.b.c.a	ENSGT00940000156964.A.f	ENSGT00940000156505.s.h	ENSGT00940000157054.c.b.e	ENSGT01000000220278	ENSGT00940000159766.i.a	ENSGT00940000162058.a	ENSGT00940000157303.f.f	ENSGT00940000155310.b.a	ENSGT00390000001094.y.a	ENSGT01030000234528.A.a.b.b	ENSGT00940000160819	ENSGT01040000240385.A.b.b.a.a.a.a.a.a
River trout	MODERN SPECIES	1	hexdc (ENSSTUG00000048898)	ogfod3 (ENSSTUG00000048888)	ENSSTUG00000048886	ENSSTUG00000048885	ENSSTUG00000048883	CACNA1G (ENSSTUG00000048221)	SPATA20 (ENSSTUG00000047647)	ENSSTUG00000047589	KCTD21 (ENSSTUG00000047583)	llgl2 (ENSSTUG00000047454)	ENSSTUG00000047421	TMEM94 (ENSSTUG00000046493)	ENSSTUG00000046448	ENSSTUG00000046444	ENSSTUG00000046438	MBTD1 (ENSSTUG00000046132) ##22	ENSSTUG00000046086	ENSSTUG00000046042	ca10a (ENSSTUG00000045879)	GRIN2C (ENSSTUG00000045795)	ENSSTUG00000045788	rgs9b (ENSSTUG00000043174)	GNA13 (ENSSTUG00000042904)	ENSSTUG00000042886	BICRAL (ENSSTUG00000042849)	tbcc (ENSSTUG00000042830)	prph2a (ENSSTUG00000042821)	ENSSTUG00000042773	timm23a (ENSSTUG00000042716)	zgc:112285 (ENSSTUG00000042694)	ENSSTUG00000042657
Atlantic salmon	MODERN SPECIES	20	CYBC1 (ENSSSAG00000064025)	HEXD (ENSSSAG00000063996)	uts2r2 (ENSSSAG00000063972)	ENSSSAG00000006682	ENSSSAG00000009677	ENSSSAG00000086177	ENSSSAG00000063842	ENSSSAG00000058778	ENSSSAG00000058422	ENSSSAG00000058303	llgl2 (ENSSSAG00000045921)	ENSSSAG00000045671	ENSSSAG00000042280	ENSSSAG00000042163	ENSSSAG00000087495	ENSSSAG00000041187 ##22	ENSSSAG00000041122	ENSSSAG00000040946	ENSSSAG00000040864	ENSSSAG00000071085	ENSSSAG00000112143	ENSSSAG00000040222	ENSSSAG00000119298	ENSSSAG00000009281	ENSSSAG00000008868	BICRAL (ENSSSAG00000079997)	tbcc (ENSSSAG00000079994)	prph2a (ENSSSAG00000109084)	ENSSSAG00000121419	timm23a (ENSSSAG00000089242)	zgc:112285 (ENSSSAG00000103090)
Huchen	MODERN SPECIES	81	cybc1 (ENSHHUG00000023271)	hexdc (ENSHHUG00000023278)	ogfod3 (ENSHHUG00000023308)	ENSHHUG00000023317	ENSHHUG00000023325	CACNA1G (ENSHHUG00000023349)	SPATA20 (ENSHHUG00000024839)	ENSHHUG00000024969	KCTD21 (ENSHHUG00000024977)	llgl2 (ENSHHUG00000024986)	ENSHHUG00000025071	ENSHHUG00000025096	TMEM94 (ENSHHUG00000025119)	ENSHHUG00000025249	ENSHHUG00000025256	MBTD1 (ENSHHUG00000025264) ##22	ENSHHUG00000025389	ENSHHUG00000025414	ca10a (ENSHHUG00000025426)
Salmoninae	ANCESTRAL SPECIES	506									ENSGT00940000162710.c.b	ENSGT00950000183187.B	ENSGT00940000160906.c	ENSGT00950000182906.a.a.b.g	ENSGT00930000151032.B.d.a	ENSGT00390000016550.d	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a.d ##22	ENSGT00940000164818.c.a.f.a	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.a	ENSGT00940000179984	ENSGT00940000155223.a.b.c.b	ENSGT00940000156964.A.e	ENSGT00940000156505.s.g	ENSGT00940000157054.c.b.f	ENSGT00940000167489	ENSGT00940000159766.i.b	ENSGT00940000162058.b	ENSGT00940000157303.f.e	ENSGT00940000155310.b.b.a
Huchen	MODERN SPECIES	1604							ENSHHUG00000038673	ENSHHUG00000038847	ENSHHUG00000038849	llgl2 (ENSHHUG00000038852)	ENSHHUG00000038913	ENSHHUG00000038920	ENSHHUG00000038926	TMEM94 (ENSHHUG00000038949)	tdrkh (ENSHHUG00000038991)	MBTD1 (ENSHHUG00000039020) ##22	ENSHHUG00000039062	ENSHHUG00000039077	ENSHHUG00000039082
Salmoninae_a	ANCESTRAL SPECIES	17	ENSGT00900000141125	ENSGT00940000165867.A	ENSGT00940000153514.a.b.q.a	ENSGT00390000004691.h	ENSGT00390000005895.h	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b.k	ENSGT00940000159664.f.b	ENSGT00940000162710.c.b	ENSGT00950000183187.B	ENSGT00940000160906.c	ENSGT00950000182906.a.a.b.g	ENSGT00930000151032.B.d.a	ENSGT00390000016550.d	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a.d ##22	ENSGT00940000164818.c.a.f.a	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.a	ENSGT00940000179984	ENSGT00940000155223.a.b.c.b	ENSGT00940000156964.A.e	ENSGT00940000156505.s.g	ENSGT00940000157054.c.b.f	ENSGT00940000167489	ENSGT00940000159766.i.b	ENSGT00940000162058.b	ENSGT00940000157303.f.e	ENSGT00940000155310.b.b.b.b	ENSGT00390000001094.y.b	ENSGT01030000234528.A.a.b.a	ENSGT00940000171130
Oncorhynchus	ANCESTRAL SPECIES	26	ENSGT00900000141125.i	ENSGT00940000165867.A	ENSGT00940000153514.a.b.q.a	ENSGT00390000004691.h	ENSGT00390000005895.h	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b.k	ENSGT00940000159664.f.b	ENSGT00940000162710.c.b	ENSGT00950000183187.B	ENSGT00940000160906.c	ENSGT00950000182906.a.a.b.g	ENSGT00930000151032.B.d.a	ENSGT00390000016550.d	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a.d ##22	ENSGT00940000164818.c.a.f.a	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.a	ENSGT00940000179984	ENSGT00940000155223.a.b.c.b	ENSGT00940000156964.A.e	ENSGT00940000156505.s.g	ENSGT00940000157054.c.b.f	ENSGT00940000167489	ENSGT00940000159766.i.b	ENSGT00940000162058.b	ENSGT00940000157303.f.e	ENSGT00940000155310.b.b.b.b	ENSGT00390000001094.y.b	ENSGT01030000234528.A.a.b.a	ENSGT00940000171130
Oncorhynchus_a	ANCESTRAL SPECIES	21	ENSGT01080000259546	ENSGT00900000141125.i	ENSGT00940000165867.A	ENSGT00940000153514.a.b.q.a	ENSGT00390000004691.h	ENSGT00940000157017.a.b.a	ENSGT00940000156819.a.b.k	ENSGT00940000159664.f.b	ENSGT00940000162710.c.b	ENSGT00950000183187.B	ENSGT00940000160906.c	ENSGT00950000182906.a.a.b.g	ENSGT00930000151032.B.d.a	ENSGT00390000016550.d	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a.d ##22	ENSGT00940000164818.c.a.f.a	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.a	ENSGT00940000179984	ENSGT00940000155223.a.b.c.b	ENSGT00940000156964.A.e	ENSGT00940000156505.s.g	ENSGT00940000157054.c.b.f	ENSGT00940000167489	ENSGT00940000159766.i.b	ENSGT00940000162058.b	ENSGT00940000157303.f.e	ENSGT00940000155310.b.b.b.b	ENSGT00390000001094.y.b	ENSGT01030000234528.A.a.b.a	ENSGT00940000171130
Chinook salmon	MODERN SPECIES	16	ENSOTSG00005005199	map2k4b (ENSOTSG00005005203)	ENSOTSG00005007103 ##13	ENSOTSG00005007105	ENSOTSG00005007107	foxk2a (ENSOTSG00005007108)	wdr45b (ENSOTSG00005007121)	CDR2L (ENSOTSG00005007136)	ENSOTSG00005002525	sap30bp (ENSOTSG00005002636)	UTS2R (ENSOTSG00005002638)	ENSOTSG00005002797	ENSOTSG00005002804	TMEM94 (ENSOTSG00005002859)	tdrkh (ENSOTSG00005005191)	MBTD1 (ENSOTSG00005005197) ##22	ENSOTSG00005005227	ENSOTSG00005005289	ENSOTSG00005005291	ca10a (ENSOTSG00005005292)	ENSOTSG00005005293	ENSOTSG00005005297	galk1 (ENSOTSG00005006225)	ENSOTSG00005006226	llgl2 (ENSOTSG00005006227)	rbm39a (ENSOTSG00005006235)	sdc4 (ENSOTSG00005006306)	ENSOTSG00005006308	rgs9b (ENSOTSG00005006309)	ENSOTSG00005006314	ENSOTSG00005006315
Coho salmon	MODERN SPECIES	12	ENSOKIG00005013960	CYBC1 (ENSOKIG00005013990)	UTS2R (ENSOKIG00005013993)	ENSOKIG00005014001	ENSOKIG00005014019	ENSOKIG00005014035	ENSOKIG00005014042	ENSOKIG00005014120	ENSOKIG00005015632	galk1 (ENSOKIG00005015904)	ENSOKIG00005015912	llgl2 (ENSOKIG00005015938)	ENSOKIG00005016120	TMEM94 (ENSOKIG00005016205)	tdrkh (ENSOKIG00005017490)	MBTD1 (ENSOKIG00005017563) ##22	ENSOKIG00005017658	ENSOKIG00005017678	ENSOKIG00005017688	CA10 (ENSOKIG00005017708)	ENSOKIG00005017817	GRIN2C (ENSOKIG00005017827)	ENSOKIG00005018001	ENSOKIG00005018012	ENSOKIG00005018020	rgs9b (ENSOKIG00005018118)	GNA13 (ENSOKIG00005020269)	ENSOKIG00005020321	BICRAL (ENSOKIG00005020335)	tbcc (ENSOKIG00005020361)	prph2a (ENSOKIG00005020374)
Rainbow trout	MODERN SPECIES	7	ENSOMYG00000022181	CYBC1 (ENSOMYG00000022201)	ogfod3 (ENSOMYG00000061834)	UTS2R (ENSOMYG00000022217)	ENSOMYG00000022223	ENSOMYG00000075077	ENSOMYG00000050381	ENSOMYG00000053794	galk1 (ENSOMYG00000022285)	llgl2 (ENSOMYG00000022496)	ENSOMYG00000048788	ENSOMYG00000067319	ENSOMYG00000022757	ENSOMYG00000023040	tdrkh (ENSOMYG00000023655)	ENSOMYG00000023764 ##22	ENSOMYG00000023822	ENSOMYG00000054335	ENSOMYG00000023843	ENSOMYG00000023867	ENSOMYG00000023914	ENSOMYG00000024250	ENSOMYG00000025407	ENSOMYG00000025484	BICRAL (ENSOMYG00000025514)	tbcc (ENSOMYG00000025543)	prph2a (ENSOMYG00000025561)	ENSOMYG00000025568	timm23a (ENSOMYG00000025574)	zgc:112285 (ENSOMYG00000025587)	ENSOMYG00000061039
Salmo	ANCESTRAL SPECIES	3	ENSGT00900000141125	ENSGT00940000165867.A	ENSGT00940000153514.a.b.q.a	ENSGT00390000004691.h	ENSGT00940000157017.a.b.a	ENSGT01010000224947.B	ENSGT00970000193647	ENSGT00940000156819.a.b.k	ENSGT00940000159664.f.b	ENSGT00940000162710.c.b.m	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b.g	ENSGT00930000151032.B.d.a	ENSGT00390000016550.d	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a.d ##22	ENSGT00940000164818.c.a.f.a	ENSGT01040000240385.A.b.b.a.a.a.a.a.b.a	ENSGT00940000179984	ENSGT00940000155223.a.b.c.b	ENSGT00940000156964.A.e	ENSGT00940000156505.s.g	ENSGT00940000157054.c.b.f	ENSGT00940000167489	ENSGT00940000159766.i.b	ENSGT00940000162058.b	ENSGT00940000157303.f.e	ENSGT00940000155310.b.b.a	ENSGT00390000001094.y.b	ENSGT01030000234528.A.a.b.a	ENSGT00940000171130
Atlantic salmon	MODERN SPECIES	10	ENSSSAG00000006689	ENSSSAG00000006697	ENSSSAG00000006702	ENSSSAG00000006850	ENSSSAG00000083529	ENSSSAG00000087322	ENSSSAG00000086535	ENSSSAG00000114980	galk1 (ENSSSAG00000017595)	ENSSSAG00000119709	llgl2 (ENSSSAG00000022267)	ENSSSAG00000105992	ENSSSAG00000051135	ENSSSAG00000051331	tdrkh (ENSSSAG00000055766)	ENSSSAG00000055795 ##22	ENSSSAG00000055811	ENSSSAG00000055822	ENSSSAG00000055826	ENSSSAG00000055831	ENSSSAG00000089386	ENSSSAG00000009180	ENSSSAG00000055997	GNA13 (ENSSSAG00000064960)	ENSSSAG00000117131	ENSSSAG00000091038	BICRAL (ENSSSAG00000064978)	tbcc (ENSSSAG00000064983)	prph2a (ENSSSAG00000120836)	ENSSSAG00000089667	timm23a (ENSSSAG00000116562)
River trout	MODERN SPECIES	11	UTS2R (ENSSTUG00000010528)	ENSSTUG00000010535	ENSSTUG00000010541	ENSSTUG00000010554	CACNA1G (ENSSTUG00000010667)	ENSSTUG00000015491	ENSSTUG00000015501	ENSSTUG00000015690	ENSSTUG00000016743	ENSSTUG00000016844	galk1 (ENSSTUG00000016917)	llgl2 (ENSSTUG00000016976)	ENSSTUG00000017320	TMEM94 (ENSSTUG00000017385)	tdrkh (ENSSTUG00000017496)	MBTD1 (ENSSTUG00000017597) ##22	ENSSTUG00000017651	ENSSTUG00000017663	ca10a (ENSSTUG00000001184)	GRIN2C (ENSSTUG00000002985)	rgs9b (ENSSTUG00000003315)	GNA13 (ENSSTUG00000004852)	ENSSTUG00000004891	BICRAL (ENSSTUG00000004915)	tbcc (ENSSTUG00000004970)	prph2a (ENSSTUG00000004979)	ENSSTUG00000004995	ENSSTUG00000005032	timm23a (ENSSTUG00000005044)	zgc:112285 (ENSSTUG00000005065)	si:dkey-21e13.3 (ENSSTUG00000005083)
Northern pike	MODERN SPECIES	4	narf (ENSELUG00000023538)	cybc1 (ENSELUG00000023549)	hexdc (ENSELUG00000034259)	ogfod3 (ENSELUG00000023571)	ENSELUG00000023587	CACNA1G (ENSELUG00000023718)	SPATA20 (ENSELUG00000023737)	ENSELUG00000023745	ENSELUG00000023832	ENSELUG00000001537	galk1 (ENSELUG00000023907)	llgl2 (ENSELUG00000023928)	ENSELUG00000024131	TMEM94 (ENSELUG00000024432)	tdrkh (ENSELUG00000024537)	MBTD1 (ENSELUG00000024563) ##22	nme2a (ENSELUG00000024612)	ENSELUG00000027558	ENSELUG00000028396	ca10a (ENSELUG00000024623)	GRIN2C (ENSELUG00000002213)	rgs9b (ENSELUG00000002222)	GNA13 (ENSELUG00000002233)	ENSELUG00000002238	BICRAL (ENSELUG00000002256)	tbcc (ENSELUG00000027652)	prph2a (ENSELUG00000002270)	ENSELUG00000002282	timm23a (ENSELUG00000002292)	zgc:112285 (ENSELUG00000002301)	ENSELUG00000025544
Osteoglossiformes	ANCESTRAL SPECIES	7	ENSGT00940000165377	ENSGT00940000153514.a.b	ENSGT00390000004691	ENSGT00390000014852.a	ENSGT00390000005895	ENSGT00940000156819.a.b	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000162710.c.b	ENSGT00940000167780	ENSGT00950000183187.B	ENSGT00950000182906.a.a.b	ENSGT00930000151032.B	ENSGT00390000016550	ENSGT00940000166206	ENSGT00940000153840.a.a.a.a ##22	ENSGT00940000164818.c.a	ENSGT00940000155223.a.a	ENSGT00530000063937.a	ENSGT00390000014660	ENSGT00940000158326.a	ENSGT00940000158883.a	ENSGT00950000182849.B.c.b.b	ENSGT00940000158256.g.q	ENSGT00940000159930	ENSGT01100000263687	ENSGT00940000156867	ENSGT00940000154883.d	ENSGT00390000008825.b.b	ENSGT00390000009925.b	ENSGT00940000164514.b.a
Asian bonytongue	MODERN SPECIES	12	narf (ENSSFOG00015002768)	cybc1 (ENSSFOG00015002722)	hexdc (ENSSFOG00015002706)	ogfod3 (ENSSFOG00015002687)	ENSSFOG00015002675	CACNA1G (ENSSFOG00015002549)	SPATA20 (ENSSFOG00015002529)	ENSSFOG00015001654	ENSSFOG00015001510	ENSSFOG00015001459	galk1 (ENSSFOG00015029859)	llgl2 (ENSSFOG00015001315)	ENSSFOG00015024618	TMEM94 (ENSSFOG00015001056)	tdrkh (ENSSFOG00015001048)	MBTD1 (ENSSFOG00015001024) ##22	nme2a (ENSSFOG00015001013)	CA10 (ENSSFOG00015000949)	ENSSFOG00015000898	mrpl27 (ENSSFOG00015030015)	xylt2 (ENSSFOG00015000821)	ENSSFOG00015000740	NHERF1 (ENSSFOG00015000708)	CASKIN2 (ENSSFOG00015000658)	st6galnac1.2 (ENSSFOG00015000642)	jmjd6 (ENSSFOG00015000609)	ENSSFOG00015000588	ubald2 (ENSSFOG00015000477)	RNF157 (ENSSFOG00015000366)	ENSSFOG00015027477	lrrc59 (ENSSFOG00015026694)
P. kingsleyae	MODERN SPECIES	437											galk1 (ENSPKIG00000018126)	llgl2 (ENSPKIG00000017930)	ENSPKIG00000017838	TMEM94 (ENSPKIG00000017752)	tdrkh (ENSPKIG00000017597)	MBTD1 (ENSPKIG00000017448) ##22	nme2a (ENSPKIG00000017359)
Osteoglossocephalai	ANCESTRAL SPECIES	634																ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919
Clupeocephala	ANCESTRAL SPECIES	116			ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279	ENSGT00940000175578	ENSGT01030000234646.B.a.a.a.a.b	ENSGT00940000153704.B.d	ENSGT00940000157439.a	ENSGT00940000154534.b.a	ENSGT00390000004405.b	ENSGT00950000182892.a.b.a.b.b	ENSGT00940000154152.b.a	ENSGT00940000166856
Euteleosteomorpha	ANCESTRAL SPECIES	258				ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000154717.qc	ENSGT00940000163935
Protacanthopterygii	ANCESTRAL SPECIES	5	ENSGT00940000160548	ENSGT00390000018292.d	ENSGT00390000006930	ENSGT00940000160144	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.b	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000154717.qc	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279	ENSGT00940000157190.c	ENSGT00710000106813.B.a	ENSGT00940000161586.c	ENSGT01080000257365.b.a.a.b.b.e.c	ENSGT00390000012062	ENSGT00940000166828	ENSGT00940000166962
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	499								ENSGT00940000156395.f.c.b	ENSGT00390000015789.g	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.a.a.b	ENSGT01090000260030.a.b.b.b.g.b	ENSGT01030000235009.a	ENSGT00940000164067.A.a.b	ENSGT01030000234627.a.a.d.b.g.a	ENSGT00940000164729.a.a.b	ENSGT00940000153840.a.a.a.b.a ##22	ENSGT00940000162213.cb	ENSGT00440000033919.e	ENSGT00940000165499.a.b	ENSGT00940000162814.b	ENSGT00940000167798.b	ENSGT00550000074898.i	ENSGT00940000156314.a.b	ENSGT00940000160279.c.b	ENSGT00940000157190.c.g	ENSGT00710000106813.B.a	ENSGT00940000161586.c.b	ENSGT01080000257365.b.a.a.b.b.e.c.b
Salmoninae_a	ANCESTRAL SPECIES	92	ENSGT00940000154957.A.d	ENSGT00990000204190.a	ENSGT00940000160548.a	ENSGT00390000018292.d.d.b	ENSGT00390000006930.d	ENSGT00940000160144.f	ENSGT00940000155557.jc.a.d	ENSGT00940000156395.f.c.b	ENSGT00390000015789.g	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.a.a.b	ENSGT01090000260030.a.b.b.b.g.b	ENSGT01030000235009.a	ENSGT00940000164067.A.a.b	ENSGT01030000234627.a.a.d.b.g.a	ENSGT00940000164729.a.a.b	ENSGT00940000153840.a.a.a.b.a ##22	ENSGT00940000162213.cb	ENSGT00440000033919.e	ENSGT00940000165499.a.b	ENSGT00940000162814.b	ENSGT00940000167798.b	ENSGT00550000074898.i	ENSGT00940000156314.a.b	ENSGT00940000160279.c.b	ENSGT00940000157190.c.g	ENSGT01050000245493	ENSGT00940000161586.c.b	ENSGT01080000257365.b.a.a.b.b.e.c.b	ENSGT00390000012062.g	ENSGT00940000166828.o	ENSGT00940000166962.f
Oncorhynchus	ANCESTRAL SPECIES	64	ENSGT00940000157981.a.b.f	ENSGT00940000159091.b	ENSGT00940000154957.A.d	ENSGT00990000204190.a	ENSGT00940000160548.a	ENSGT00390000018292.d.d.b	ENSGT00390000006930.d	ENSGT00940000160144.f	ENSGT00940000155557.jc.a.d	ENSGT00940000156395.f.c.b	ENSGT00390000015789.g.b	ENSGT01090000260030.a.b.b.b.g.b	ENSGT01030000235009.a	ENSGT01030000234627.a.a.d.b.g.a	ENSGT00940000164729.a.a.b	ENSGT00940000153840.a.a.a.b.a ##22	ENSGT00940000162213.cb	ENSGT00440000033919.e	ENSGT00940000165499.a.b	ENSGT00940000162814.b	ENSGT00940000167798.b	ENSGT00550000074898.i	ENSGT00940000156314.a.b	ENSGT00940000160279.c.b	ENSGT00940000157190.c.g	ENSGT01050000245493
Oncorhynchus_a	ANCESTRAL SPECIES	71	ENSGT00940000157981.a.b.f	ENSGT00940000159091.b	ENSGT00940000154957.A.d	ENSGT00990000204190.a	ENSGT00940000160548.a	ENSGT00390000018292.d.d.b	ENSGT00390000006930.d	ENSGT00940000160144.f	ENSGT00940000155557.jc.a.d	ENSGT00940000156395.f.c.b	ENSGT00390000015789.g.b	ENSGT01090000260030.a.b.b.b.g.b	ENSGT01030000235009.a	ENSGT01030000234627.a.a.d.b.g.a	ENSGT00940000164729.a.a.b	ENSGT00940000153840.a.a.a.b.a ##22	ENSGT00940000162213.cb	ENSGT00440000033919.e	ENSGT00940000165499.a.b	ENSGT00940000162814.b	ENSGT00940000167798.b	ENSGT00550000074898.i	ENSGT00940000156314.a.b	ENSGT00940000160279.c.b	ENSGT00940000157190.c.g	ENSGT01050000245493
Chinook salmon	MODERN SPECIES	19	atp5mc1 (ENSOTSG00005015620)	ube2z (ENSOTSG00005015622)	igf2bp1 (ENSOTSG00005015631)	ENSOTSG00005016329	nr1d1 (ENSOTSG00005016330)	msl1a (ENSOTSG00005016331)	casc3 (ENSOTSG00005016332)	RAPGEFL1 (ENSOTSG00005016333)	wipf2b (ENSOTSG00005016340)	JUP (ENSOTSG00005016355)	eif1 (ENSOTSG00005017231)	si:dkeyp-113d7.1 (ENSOTSG00005017232)	ENSOTSG00005017233	stx1b (ENSOTSG00005017235)	ENSOTSG00005017704	MBTD1 (ENSOTSG00005017706) ##22	ENSOTSG00005017712	ENSOTSG00005017715	UBE2M (ENSOTSG00005018006)	zgc:158376 (ENSOTSG00005018017)	kpnb1 (ENSOTSG00005018019)	ENSOTSG00005018023	ENSOTSG00005018027	MPP3 (ENSOTSG00005018029)	ENSOTSG00005018037	ZNF281 (ENSOTSG00005018038)	ENSOTSG00005018039	lasp1 (ENSOTSG00005018040)	PLXDC1 (ENSOTSG00005018042)	arl5c (ENSOTSG00005018059)	cacnb1 (ENSOTSG00005018061)
Coho salmon	MODERN SPECIES	1	atp5mc1 (ENSOKIG00005009030)	ube2z (ENSOKIG00005009047)	igf2bp1 (ENSOKIG00005009099)	ENSOKIG00005009603	nr1d1 (ENSOKIG00005009612)	msl1a (ENSOKIG00005009623)	casc3 (ENSOKIG00005009626)	RAPGEFL1 (ENSOKIG00005009646)	wipf2b (ENSOKIG00005009849)	JUP (ENSOKIG00005009875)	eif1 (ENSOKIG00005009912)	si:dkeyp-113d7.1 (ENSOKIG00005009932)	ENSOKIG00005009937	stx1b (ENSOKIG00005010007)	ENSOKIG00005010517	MBTD1 (ENSOKIG00005010531) ##22	ENSOKIG00005010611	ENSOKIG00005010630	ENSOKIG00005010688	UBE2M (ENSOKIG00005010712)	ENSOKIG00005010774	kpnb1 (ENSOKIG00005010808)	ENSOKIG00005011215	ENSOKIG00005011230	MPP3 (ENSOKIG00005011280)	ENSOKIG00005031695	ZNF281 (ENSOKIG00005031730)	ENSOKIG00005031744	tmem98 (ENSOKIG00005031765)	ENSOKIG00005031816	ENSOKIG00005032038
Rainbow trout	MODERN SPECIES	4	msl1a (ENSOMYG00000005976)	casc3 (ENSOMYG00000005997)	RAPGEFL1 (ENSOMYG00000006325)	ENSOMYG00000065152	wipf2b (ENSOMYG00000006553)	ENSOMYG00000007711	ENSOMYG00000056965	ENSOMYG00000074164	eif1 (ENSOMYG00000008907)	ENSOMYG00000065221	ENSOMYG00000050196	si:dkeyp-113d7.1 (ENSOMYG00000008923)	ENSOMYG00000008936	stx1b (ENSOMYG00000009038)	ENSOMYG00000009149	ENSOMYG00000009290 ##22	ndkb (ENSOMYG00000009366)	ENSOMYG00000009853	ENSOMYG00000009722	ENSOMYG00000009800	ENSOMYG00000010061	ENSOMYG00000010644	ENSOMYG00000010666	ENSOMYG00000010713	ENSOMYG00000054472	ENSOMYG00000010777	ENSOMYG00000010784	ENSOMYG00000010800	ENSOMYG00000010841	ENSOMYG00000010926	ENSOMYG00000010904
Salmo	ANCESTRAL SPECIES	28	ENSGT00940000154957.A.d	ENSGT00990000204190.a	ENSGT00940000160548.a	ENSGT00390000018292.d.d.b	ENSGT00390000006930.d	ENSGT00940000160144.f	ENSGT00940000155557.jc.a.d	ENSGT00940000156395.f.c.b	ENSGT00390000015789.g	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.a.a.b	ENSGT01090000260030.a.b.b.b.g.b	ENSGT01030000235009.a	ENSGT00940000164067.A.a.b	ENSGT01030000234627.a.a.d.b.g.a	ENSGT00940000164729.a.a.b	ENSGT00940000153840.a.a.a.b.a ##22	ENSGT00940000162213.cb	ENSGT00440000033919.e	ENSGT00940000165499.a.b	ENSGT00940000162814.b	ENSGT00940000167798.b	ENSGT00550000074898.i	ENSGT00940000156314.a.b	ENSGT00940000160279.c.b	ENSGT00940000157190.c.g	ENSGT01050000245493	ENSGT00710000106813.B.a.d	ENSGT00940000161586.c.b	ENSGT01080000257365.b.a.a.b.b.e.c.b	ENSGT00390000012062.g	ENSGT00940000166828.o
River trout	MODERN SPECIES		msl1a (ENSSTUG00000000839)	casc3 (ENSSTUG00000000847)	RAPGEFL1 (ENSSTUG00000000860)	wipf2b (ENSSTUG00000000882)	JUP (ENSSTUG00000000910)	ENSSTUG00000001000	eif1 (ENSSTUG00000001002)	ENSSTUG00000001026	si:dkeyp-113d7.1 (ENSSTUG00000001051)	ENSSTUG00000001056	prf1.3 (ENSSTUG00000001061)	stx1b (ENSSTUG00000001090)	ENSSTUG00000001331	ENSSTUG00000001335	ENSSTUG00000001342	MBTD1 (ENSSTUG00000001352) ##22	NME1 (ENSSTUG00000001390)	UTP18 (ENSSTUG00000001401)	btr30 (ENSSTUG00000001442)	UBE2M (ENSSTUG00000001458)	zgc:158376 (ENSSTUG00000001472)	kpnb1 (ENSSTUG00000001513)	ENSSTUG00000001794	ENSSTUG00000001822	ENSSTUG00000001838	MPP3 (ENSSTUG00000001887)	ENSSTUG00000002303	ZNF281 (ENSSTUG00000002321)	ENSSTUG00000002330	tmem98 (ENSSTUG00000002338)	ENSSTUG00000002374
Atlantic salmon	MODERN SPECIES	25	ube2z (ENSSSAG00000005933)	igf2bp1 (ENSSSAG00000003448)	ENSSSAG00000003161	nr1d1 (ENSSSAG00000003153)	msl1a (ENSSSAG00000003145)	casc3 (ENSSSAG00000003140)	RAPGEFL1 (ENSSSAG00000007891)	wipf2b (ENSSSAG00000003100)	ENSSSAG00000002966	EIF1B (ENSSSAG00000002926)	si:dkeyp-113d7.1 (ENSSSAG00000002915)	ENSSSAG00000002906	prf1.3 (ENSSSAG00000009129)	stx1b (ENSSSAG00000002736)	ENSSSAG00000002696	ENSSSAG00000009403 ##22	ENSSSAG00000091055	ENSSSAG00000002312	ENSSSAG00000002228	ENSSSAG00000009674	ENSSSAG00000072387	ENSSSAG00000009758	ENSSSAG00000072295	ENSSSAG00000098173	ENSSSAG00000010257	ENSSSAG00000087995	ENSSSAG00000070615	ENSSSAG00000118357	tmem98 (ENSSSAG00000070600)	ENSSSAG00000070570	ENSSSAG00000070543
Huchen	MODERN SPECIES	307				epha4b (ENSHHUG00000024781)	JUP (ENSHHUG00000026374)	eif1 (ENSHHUG00000026784)	eif1 (ENSHHUG00000026887)	ENSHHUG00000026911	si:dkeyp-113d7.1 (ENSHHUG00000026923)	ENSHHUG00000026926	prf1.3 (ENSHHUG00000026931)	stx1b (ENSHHUG00000026940)	ENSHHUG00000027028	ENSHHUG00000027029	ENSHHUG00000027030	MBTD1 (ENSHHUG00000027032) ##22	ENSHHUG00000027038	ENSHHUG00000027044	ENSHHUG00000027070	UBE2M (ENSHHUG00000027074)	zgc:158376 (ENSHHUG00000027173)	kpnb1 (ENSHHUG00000027179)	ENSHHUG00000027312	ENSHHUG00000027349	MPP3 (ENSHHUG00000027359)	ENSHHUG00000027423	ZNF281 (ENSHHUG00000027442)	ENSHHUG00000027447
Salmoninae	ANCESTRAL SPECIES	126	ENSGT00390000006930.c	ENSGT00940000160144.e	ENSGT00940000155557.jc.a.c	ENSGT00940000156395.f.c.a	ENSGT00390000015789.h.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.b	ENSGT00390000015789.h.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.a	ENSGT01090000260030.a.b.b.b.g.a	ENSGT01030000235009.b	ENSGT00940000164067.A.a.a	ENSGT01030000234627.a.a.d.b.g.b	ENSGT00940000164729.a.a.a	ENSGT00940000153840.a.a.a.b.b ##22	ENSGT00940000162213.bb	ENSGT00440000033919.f	ENSGT00940000165499.a.a	ENSGT00940000163935	ENSGT00940000162814.a	ENSGT00940000167798.a	ENSGT00550000074898.j	ENSGT00940000156314.a.a	ENSGT00940000160279.c.a	ENSGT00940000160279.d	ENSGT00940000157190.c.h	ENSGT00940000161586.c.a	ENSGT01080000257365.b.a.a.b.b.e.c.a	ENSGT00390000012062.h	ENSGT00940000166828.p
Salmoninae_a	ANCESTRAL SPECIES	77	ENSGT00390000018292.d.c.a	ENSGT00390000006930.c	ENSGT00940000160144.e	ENSGT00940000155557.jc.a.c	ENSGT00940000156395.f.c.a	ENSGT00390000015789.h.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.b	ENSGT01090000260030.a.b.b.b.g.a	ENSGT01030000235009.b	ENSGT00940000164067.A.b	ENSGT01030000234627.a.a.d.b.h	ENSGT00940000164067.A.a.a	ENSGT01030000234627.a.a.d.b.g.b	ENSGT00940000164729.a.a.a	ENSGT00940000153840.a.a.a.b.b ##22	ENSGT00940000162213.bb	ENSGT00440000033919.f	ENSGT00940000165499.a.a	ENSGT00940000163935	ENSGT00940000154717.qc	ENSGT00940000162814.a	ENSGT00940000167798.a	ENSGT00550000074898.j	ENSGT00940000156314.a.a	ENSGT00940000160279.c.a	ENSGT00940000157190.c.h	ENSGT00710000106813.B.a	ENSGT00940000161586.c.a	ENSGT01080000257365.b.a.a.b.b.e.c.a	ENSGT00390000012062.h
Salmo	ANCESTRAL SPECIES	55	ENSGT00990000204190.b	ENSGT00940000160548.b	ENSGT00390000018292.d.d.a	ENSGT00390000006930.c	ENSGT00940000160144.e	ENSGT00940000155557.jc.a.c	ENSGT00940000156395.f.c.a	ENSGT00390000015789.h.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.b	ENSGT01090000260030.a.b.b.b.g.a	ENSGT01030000235009.b	ENSGT00940000164067.A.a.a	ENSGT01030000234627.a.a.d.b.g.b	ENSGT00940000164729.a.a.a	ENSGT00940000153840.a.a.a.b.b ##22	ENSGT00940000162213.bb	ENSGT00440000033919.f	ENSGT00940000165499.a.a	ENSGT00940000162814.a	ENSGT00940000167798.a	ENSGT00550000074898.j	ENSGT00940000156314.a.a	ENSGT00940000160279.c.a	ENSGT00940000157190.c.h	ENSGT00710000106813.B.a.c	ENSGT00940000161586.c.a	ENSGT01080000257365.b.a.a.b.b.e.c.a	ENSGT00390000012062.h	ENSGT00940000166828.p	ENSGT00940000166962.e
River trout	MODERN SPECIES	25	ENSSTUG00000044314	nr1d1 (ENSSTUG00000044343)	msl1a (ENSSTUG00000044348)	casc3 (ENSSTUG00000044361)	RAPGEFL1 (ENSSTUG00000044392)	wipf2b (ENSSTUG00000044493)	JUP (ENSSTUG00000044519)	eif1 (ENSSTUG00000045148)	ENSSTUG00000019765	krt91 (ENSSTUG00000019785)	si:dkeyp-113d7.1 (ENSSTUG00000019815)	ENSSTUG00000019823	prf1.3 (ENSSTUG00000019827)	stx1b (ENSSTUG00000019895)	ENSSTUG00000019988	MBTD1 (ENSSTUG00000020067) ##22	ENSSTUG00000020910	UTP18 (ENSSTUG00000020944)	btr30 (ENSSTUG00000021070)	UBE2M (ENSSTUG00000021075)	zgc:158376 (ENSSTUG00000021166)	kpnb1 (ENSSTUG00000021266)	ENSSTUG00000022164	ENSSTUG00000022251	ENSSTUG00000022273	MPP3 (ENSSTUG00000022277)	ENSSTUG00000022292	ZNF281 (ENSSTUG00000022338)	ENSSTUG00000022395	ZNF281 (ENSSTUG00000022424)	tmem98 (ENSSTUG00000022466)
Atlantic salmon	MODERN SPECIES	22	RAPGEFL1 (ENSSSAG00000003117)	wipf2b (ENSSSAG00000008135)	ENSSSAG00000008164	eif1 (ENSSSAG00000008291)	ENSSSAG00000008347	ENSSSAG00000103725	EIF1B (ENSSSAG00000008330)	ENSSSAG00000008378	cyt1 (ENSSSAG00000008863)	ENSSSAG00000009065	si:dkeyp-113d7.1 (ENSSSAG00000009096)	ENSSSAG00000101459	prf1.3 (ENSSSAG00000002801)	STX1B (ENSSSAG00000009192)	ENSSSAG00000009356	ENSSSAG00000002550 ##22	nme1 (ENSSSAG00000009542)	ENSSSAG00000009582	ENSSSAG00000009657	ENSSSAG00000093067	ubc12 (ENSSSAG00000115558)	ENSSSAG00000009716	ENSSSAG00000072328	ENSSSAG00000010096	ENSSSAG00000111509	ENSSSAG00000070638	ENSSSAG00000117629	ENSSSAG00000040410	ENSSSAG00000040423	ENSSSAG00000108405	tmem98 (ENSSSAG00000040474)
Oncorhynchus	ANCESTRAL SPECIES	33	ENSGT00990000204190.b	ENSGT00940000160548.b	ENSGT00390000018292.d.c.a	ENSGT00390000006930.c	ENSGT00940000160144.e	ENSGT00940000155557.jc.a.c	ENSGT00940000156395.f.c.a	ENSGT00390000015789.h.a	ENSGT00950000182969.B.c.b.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.b	ENSGT01090000260030.a.b.b.b.g.a	ENSGT01030000235009.b	ENSGT00940000164067.A.b	ENSGT01030000234627.a.a.d.b.g.b	ENSGT00940000164729.a.a.a	ENSGT00940000153840.a.a.a.b.b ##22	ENSGT00940000161569	ENSGT00940000162213.bb	ENSGT00440000033919.f	ENSGT00940000165499.a.a	ENSGT00940000163935	ENSGT00940000162814.a	ENSGT00940000167798.a	ENSGT00550000074898.j	ENSGT00940000156314.a.a	ENSGT00940000160279.c.a	ENSGT00940000157190.c.h	ENSGT00710000106813.B.a	ENSGT00940000161586.c.b	ENSGT01080000257365.b.a.a.b.b.e.c.b	ENSGT00390000012062.g
Rainbow trout	MODERN SPECIES	3	wipf2b (ENSOMYG00000024645)	ENSOMYG00000025731	eif1 (ENSOMYG00000031509)	ENSOMYG00000071040	eif1 (ENSOMYG00000058961)	ENSOMYG00000068553	ENSOMYG00000068628	krtt1c19e (ENSOMYG00000031648)	ENSOMYG00000031617	ENSOMYG00000031588	si:dkeyp-113d7.1 (ENSOMYG00000031661)	ENSOMYG00000031668	prf1.3 (ENSOMYG00000031676)	stx1b (ENSOMYG00000031788)	ENSOMYG00000031918	ENSOMYG00000032039 ##22	ENSOMYG00000031691	ENSOMYG00000032109	ENSOMYG00000032139	ENSOMYG00000032168	ENSOMYG00000032192	ENSOMYG00000032277	ENSOMYG00000032437	ENSOMYG00000032479	ENSOMYG00000032536	ENSOMYG00000069966	ENSOMYG00000032723	ENSOMYG00000032738	ENSOMYG00000032753	tmem98 (ENSOMYG00000032773)	ENSOMYG00000032801
Oncorhynchus_a	ANCESTRAL SPECIES	42	ENSGT00990000204190.b	ENSGT00940000160548.b	ENSGT00390000018292.d.d.a	ENSGT00390000006930.c	ENSGT00940000160144.e	ENSGT00940000155557.jc.a.c	ENSGT00940000156395.f.c.a	ENSGT00390000015789.h.a	ENSGT00950000182969.B.c.b.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b.b	ENSGT01090000260030.a.b.b.b.g.a	ENSGT01030000235009.b	ENSGT00940000164067.A.b	ENSGT01030000234627.a.a.d.b.g.b	ENSGT00940000164729.a.a.a	ENSGT00940000153840.a.a.a.b.b ##22	ENSGT00940000162213.bb	ENSGT00440000033919.f	ENSGT00940000165499.a.a	ENSGT00940000163935	ENSGT00940000167798.a	ENSGT00550000074898.j	ENSGT00940000156314.a.a	ENSGT00940000160279.c.a	ENSGT00940000157190.c.h	ENSGT00710000106813.B.a	ENSGT00940000161586.c.b	ENSGT01080000257365.b.a.a.b.b.e.c.b	ENSGT00390000012062.g	ENSGT00940000166828.o	ENSGT00390000017613.o
Chinook salmon	MODERN SPECIES	33	wipf2b (ENSOTSG00005011840)	JUP (ENSOTSG00005011844)	eif1 (ENSOTSG00005011851)	ENSOTSG00005011950	ENSOTSG00005011953	ENSOTSG00005011958	ENSOTSG00005011960	ENSOTSG00005011962	ENSOTSG00005011963	ENSOTSG00005030863	si:dkeyp-113d7.1 (ENSOTSG00005030864)	ENSOTSG00005030866	prf1.3 (ENSOTSG00005030867)	stx1b (ENSOTSG00005030873)	ENSOTSG00005031167	MBTD1 (ENSOTSG00005031171) ##22	ENSOTSG00005031219	UTP18 (ENSOTSG00005031222)	btr30 (ENSOTSG00005031250)	UBE2M (ENSOTSG00005031252)	zgc:158376 (ENSOTSG00005031368)	kpnb1 (ENSOTSG00005031376)	ENSOTSG00005032145	SAMD14 (ENSOTSG00005032148)	MPP3 (ENSOTSG00005032150)	ZNF281 (ENSOTSG00005032255)	ENSOTSG00005032256	tmem98 (ENSOTSG00005032257)	ENSOTSG00005032258	RETSAT (ENSOTSG00005032265)	nmt1a (ENSOTSG00005032266)
Coho salmon	MODERN SPECIES	26	ENSOKIG00005005422	RAPGEFL1 (ENSOKIG00005005424)	wipf2b (ENSOKIG00005005437)	JUP (ENSOKIG00005005489)	eif1 (ENSOKIG00005006678)	ENSOKIG00005006726	krtt1c19e (ENSOKIG00005006748)	ENSOKIG00005006826	ENSOKIG00005006841	si:dkeyp-113d7.1 (ENSOKIG00005006872)	ENSOKIG00005006876	prf1.3 (ENSOKIG00005006886)	stx1b (ENSOKIG00005006919)	ENSOKIG00005007379	ENSOKIG00005007392	MBTD1 (ENSOKIG00005007406) ##22	ENSOKIG00005007456	UTP18 (ENSOKIG00005007478)	btr30 (ENSOKIG00005007551)	ENSOKIG00005007568	zgc:158376 (ENSOKIG00005007660)	KPNB1 (ENSOKIG00005007694)	SOCS7 (ENSOKIG00005007779)	SAMD14 (ENSOKIG00005007796)	MPP3 (ENSOKIG00005007839)	ENSOKIG00005008059	ZNF281 (ENSOKIG00005008077)	ENSOKIG00005008091	tmem98 (ENSOKIG00005008106)	ENSOKIG00005008186	RETSAT (ENSOKIG00005008374)
Huchen	MODERN SPECIES	897	nr1d1 (ENSHHUG00000006736)	msl1a (ENSHHUG00000006722)	casc3 (ENSHHUG00000006708)	RAPGEFL1 (ENSHHUG00000006691)	wipf2b (ENSHHUG00000006684)	JUP (ENSHHUG00000006628)	eif1 (ENSHHUG00000006394)	ENSHHUG00000006362	ENSHHUG00000006226	ENSHHUG00000006146	si:dkeyp-113d7.1 (ENSHHUG00000006137)	ENSHHUG00000006128	prf1.3 (ENSHHUG00000006122)	stx1b (ENSHHUG00000005955)	ENSHHUG00000005945	MBTD1 (ENSHHUG00000005940) ##22	ENSHHUG00000005925	ENSHHUG00000005785	btr30 (ENSHHUG00000005778)	UBE2M (ENSHHUG00000005683)	zgc:158376 (ENSHHUG00000005663)	kpnb1 (ENSHHUG00000005256)	ENSHHUG00000005234	ENSHHUG00000005230	ENSHHUG00000005221	MPP3 (ENSHHUG00000005188)
Northern pike	MODERN SPECIES	10	casc3 (ENSELUG00000015093)	RAPGEFL1 (ENSELUG00000015161)	wipf2b (ENSELUG00000015246)	JUP (ENSELUG00000015284)	ENSELUG00000015298	eif1 (ENSELUG00000015327)	ENSELUG00000015383	ENSELUG00000015407	krtt1c19e (ENSELUG00000015426)	si:dkeyp-113d7.1 (ENSELUG00000015433)	ENSELUG00000015441	prf1.3 (ENSELUG00000015449)	stx1b (ENSELUG00000015482)	ENSELUG00000028273	ENSELUG00000015516	MBTD1 (ENSELUG00000015603) ##22	nme2b.1 (ENSELUG00000015649)	UTP18 (ENSELUG00000015684)	btr30 (ENSELUG00000000584)	UBE2M (ENSELUG00000015724)	zgc:158376 (ENSELUG00000015780)	kpnb1 (ENSELUG00000015847)	SOCS7 (ENSELUG00000015907)	ENSELUG00000015962	MPP3 (ENSELUG00000016081)	ENSELUG00000029436	ZNF281 (ENSELUG00000016133)	ENSELUG00000016147	tmem98 (ENSELUG00000016202)	ENSELUG00000016300	ENSELUG00000016362
Acanthomorphata	ANCESTRAL SPECIES	167			ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00530000063725.p	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.b	ENSGT00940000164729.a.a.c	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000165670	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279	ENSGT00390000017328.a.a	ENSGT00940000153653.a.a	ENSGT00940000154360.B
Euacanthomorphacea	ANCESTRAL SPECIES	93			ENSGT00950000182969.B.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT00390000012244	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00530000063725.p	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.b	ENSGT00940000164729.a.a.c	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000165670	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279	ENSGT00390000017328.a.a	ENSGT00940000153653.a.a	ENSGT00940000154360.B
Percomorphaceae	ANCESTRAL SPECIES	72	ENSGT00940000165670	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a
Percomorphaceae_B	ANCESTRAL SPECIES	2	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01050000246023	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a
Ovalentaria	ANCESTRAL SPECIES	1	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01050000246023	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a
Atherinomorphae	ANCESTRAL SPECIES	6	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263724	ENSGT01050000246023	ENSGT00940000156867	ENSGT00510000048008	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT00940000165332.A.d	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229
Cyprinodontiformes	ANCESTRAL SPECIES	53															ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279	ENSGT01060000248651.b	ENSGT00950000182860.a.a.a.ub.a	ENSGT00940000176945	ENSGT00940000154811.A	ENSGT00940000164286.j.b.a.a.b.a	ENSGT00510000050089.a.a	ENSGT00950000182858.A.b.b.g.a
Aplocheiloidei	ANCESTRAL SPECIES	123											ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000155474.o.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279	ENSGT00940000164286.j.b.a.a.b.a	ENSGT00510000050089.a.a	ENSGT00950000182858.A.b.b.g.a	ENSGT00940000157746.f	ENSGT00390000018397	ENSGT00940000176891	ENSGT00950000182935.B.b.c.f
Mangrove rivulus	MODERN SPECIES	418														ENSKMAG00000008099	ANKRD1 (ENSKMAG00000008078)	ENSKMAG00000008062 ##22	ENSKMAG00000008052	RAPGEFL1 (ENSKMAG00000008027)
Turquoise killifish	MODERN SPECIES	1623															ENSNFUG00015017068	MBTD1 (ENSNFUG00015017018) ##22	ENSNFUG00015017001	RAPGEFL1 (ENSNFUG00015016979)	CASC3 (ENSNFUG00015016974)	ENSNFUG00015016967	LRRC3C (ENSNFUG00015016951)	PSMD3 (ENSNFUG00015016445)	ENSNFUG00015016408	SAMD14 (ENSNFUG00015016400)	ENSNFUG00015016380	ABI3 (ENSNFUG00015016355)	ENSNFUG00015016348	ENSNFUG00015016337	GBGT1 (ENSNFUG00015016329)	ITGA3A (ENSNFUG00015016307)	RDM1 (ENSNFUG00015016291)
Cyprinodontoidei	ANCESTRAL SPECIES	103																ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279
Poeciliinae	ANCESTRAL SPECIES	1	ENSGT00940000158410.h	ENSGT00940000176123	ENSGT00940000157015.j	ENSGT00940000160724	ENSGT00950000182935.B.b.c.f	ENSGT00940000176891	ENSGT00390000018397	ENSGT00940000157746.f	ENSGT00950000182858.A.b.b.g.a	ENSGT00940000164286.j.b.a.a.b.a.a.b.a	ENSGT00940000177298	ENSGT00940000164286.j.b.a.a.b.a.a.a	ENSGT00940000154811.A	ENSGT00940000176945	ENSGT00950000182860.a.a.a.ub.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01090000260202	ENSGT01100000264397.A	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279	ENSGT01030000234599.a.a.u.a.j.a	ENSGT01030000234599.a.a.u.b	ENSGT01050000244893.c.a.b.i	ENSGT00390000017606.a.a	ENSGT01070000253855
Poecilia	ANCESTRAL SPECIES	8	ENSGT00940000158410.h	ENSGT00940000176123	ENSGT00940000157015.j	ENSGT00940000160724	ENSGT00950000182935.B.b.c.f	ENSGT00940000176891	ENSGT00390000018397	ENSGT00940000157746.f	ENSGT00950000182858.A.b.b.g.a	ENSGT00940000164286.j.b.a.a.b.a.a.b.a	ENSGT00940000177298	ENSGT00940000164286.j.b.a.a.b.a.a.a	ENSGT00940000154811.A	ENSGT00940000176945	ENSGT00950000182860.a.a.a.ub.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01090000260202	ENSGT01100000264397.A	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279	ENSGT01030000234599.a.a.u.a.j.a	ENSGT01030000234599.a.a.u.b	ENSGT01050000244893.c.a.b.i	ENSGT00390000017606.a.a	ENSGT01070000253855
NAME_6	ANCESTRAL SPECIES	18	ENSGT00940000155494.i	ENSGT00940000158410.h	ENSGT00940000157015.j	ENSGT00940000160724	ENSGT00950000182935.B.b.c.f	ENSGT00940000176891	ENSGT00390000018397	ENSGT00940000157746.f	ENSGT00950000182858.A.b.b.g.a	ENSGT00940000164286.j.b.a.a.b.a.a.b.a	ENSGT00940000165500	ENSGT00940000177298	ENSGT00940000154811.A	ENSGT00940000176945	ENSGT00950000182860.a.a.a.ub.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01090000260202	ENSGT01100000264397.A	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a	ENSGT00390000017328.a.a	ENSGT00940000160279	ENSGT01030000234599.a.a.u.a.j.b	ENSGT01030000234599.a.a.u.a.j.a	ENSGT01030000234599.a.a.u.b	ENSGT01050000244893.c.a.b.i	ENSGT00390000017606.a.a
Sailfin molly	MODERN SPECIES	1763												ENSPLAG00000005418	ENSPLAG00000005402	ENSPLAG00000005388	ENSPLAG00000005379	ENSPLAG00000005367 ##22	ENSPLAG00000005331	ENSPLAG00000005322	RAPGEFL1 (ENSPLAG00000005313)	casc3 (ENSPLAG00000005268)	ENSPLAG00000005257	ENSPLAG00000005245	ENSPLAG00000005236	ENSPLAG00000005226
Amazon molly	MODERN SPECIES	420	ENSPFOG00000018172	cdc27 (ENSPFOG00000018116)	ENSPFOG00000018100	ENSPFOG00000018062	ENSPFOG00000018051	itga2b (ENSPFOG00000017967)	SYNGR1 (ENSPFOG00000017940)	rdm1 (ENSPFOG00000017928)	ENSPFOG00000023549	ENSPFOG00000017839	GBGT1 (ENSPFOG00000017818)	ENSPFOG00000022953	ENSPFOG00000020803	ENSPFOG00000017805	ENSPFOG00000017782	ENSPFOG00000017714 ##22	ENSPFOG00000017698	RAPGEFL1 (ENSPFOG00000023586)	casc3 (ENSPFOG00000017632)
Guppy	MODERN SPECIES	460	ENSPREG00000012311	itga2b (ENSPREG00000012283)	SYNGR1 (ENSPREG00000012265)	ENSPREG00000012253	rdm1 (ENSPREG00000012243)	ENSPREG00000012160	GBGT1 (ENSPREG00000012117)	ENSPREG00000012095	ENSPREG00000012087	ENSPREG00000012076	ENSPREG00000012065	ENSPREG00000012060	abi3a (ENSPREG00000012024)	ENSPREG00000012000	ENSPREG00000011956	ENSPREG00000011922 ##22	ENSPREG00000011907	ENSPREG00000011882	casc3 (ENSPREG00000011856)	ENSPREG00000011833	ENSPREG00000011824	ENSPREG00000011773	psmd3 (ENSPREG00000011697)	ENSPREG00000011681	SAMD14 (ENSPREG00000011668)	ENSPREG00000011655	ENSPREG00000011629	ENSPREG00000011623	ENSPREG00000011617	CACNG2 (ENSPREG00000011604)	rpl3 (ENSPREG00000011570)
Platyfish	MODERN SPECIES	7	ENSXMAG00000012757	ENSXMAG00000012744	ENSXMAG00000025321	ENSXMAG00000012714	SYNGR1 (ENSXMAG00000012703)	ENSXMAG00000024739	rdm1 (ENSXMAG00000011018)	ENSXMAG00000012675	GBGT1 (ENSXMAG00000012659)	ENSXMAG00000021063	ENSXMAG00000027655	ENSXMAG00000023866	ENSXMAG00000025555	abi3a (ENSXMAG00000012645)	ENSXMAG00000012637	ENSXMAG00000012594 ##22	ENSXMAG00000012581	RAPGEFL1 (ENSXMAG00000023931)	ENSXMAG00000021309	ENSXMAG00000027770	ENSXMAG00000026285	casc3 (ENSXMAG00000013937)	ENSXMAG00000025176	ENSXMAG00000027210	ENSXMAG00000024355	ENSXMAG00000023764	psmd3 (ENSXMAG00000013963)	ENSXMAG00000013975	SAMD14 (ENSXMAG00000013977)	ENSXMAG00000026654	ENSXMAG00000024661
NAME_4	ANCESTRAL SPECIES	453																ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930
Sheepshead minnow	MODERN SPECIES	231																ENSCVAG00000015144 ##22	ENSCVAG00000015011	RAPGEFL1 (ENSCVAG00000014988)	casc3 (ENSCVAG00000014935)	ENSCVAG00000014921	ENSCVAG00000014900	PTGR1 (ENSCVAG00000014866)	haus3 (ENSCVAG00000014859)	nat8l (ENSCVAG00000014847)	C4orf48 (ENSCVAG00000014839)	nelfa (ENSCVAG00000014825)	faah2b (ENSCVAG00000014776)	TESK1 (ENSCVAG00000014723)	pik3c3 (ENSCVAG00000014707)	MSMP (ENSCVAG00000014597)	rgp1 (ENSCVAG00000014592)
Oryzias	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.a.b ##22
Oryzias_a	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.a.b ##22
Japanese Medaka HdrR	MODERN SPECIES	22	ENSORLG00000026092	ENSORLG00000024144	ENSORLG00000028172	thoc6 (ENSORLG00000022988)	ENSORLG00000027263	ENSORLG00000024255	stx1b (ENSORLG00000020228)	ENSORLG00000030302	ENSORLG00000030478	si:dkeyp-113d7.1 (ENSORLG00000028684)	krtt1c19e (ENSORLG00000020338)	ENSORLG00000023247	ENSORLG00000019817	cyt1 (ENSORLG00000019717)	ENSORLG00000026960	ENSORLG00000024494 ##22	ENSORLG00000030318	ENSORLG00000018463	RAPGEFL1 (ENSORLG00000030594)	casc3 (ENSORLG00000023125)	si:ch73-366l1.5 (ENSORLG00000029855)	ENSORLG00000022520	jmjd6 (ENSORLG00000018477)	mettl23 (ENSORLG00000029016)	ENSORLG00000026086	CASKIN2 (ENSORLG00000023488)	mvp (ENSORLG00000019976)	ENSORLG00000023082	ENSORLG00000024186	ENSORLG00000000189	nupr1b (ENSORLG00000027309)
Chinese medaka	MODERN SPECIES	4057																ENSOSIG00000014112 ##22
Ovalentaria_B	ANCESTRAL SPECIES		ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a
Pomacentridae	ANCESTRAL SPECIES	72	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22
Pomacentridae_A	ANCESTRAL SPECIES	15	ENSGT00940000165499.a	ENSGT00440000033919	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00390000005976.b	ENSGT00390000007119	ENSGT00390000015229	ENSGT00530000064242.a	ENSGT00940000159141.j.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000165332.A.d	ENSGT00940000161103.a	ENSGT00940000164286.j.b.a.a.b	ENSGT00390000008969.f	ENSGT00940000158256.h	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00390000006930
Amphiprion	ANCESTRAL SPECIES	9	ENSGT00940000163935	ENSGT00940000165499.a	ENSGT00440000033919	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00940000180263	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00390000005976.b	ENSGT00390000007119	ENSGT00390000015229	ENSGT00530000064242.a	ENSGT00940000159141.j.a	ENSGT00940000165332.A.d	ENSGT00940000161103.a	ENSGT00940000164286.j.b.a.a.b.d	ENSGT00940000164286.j.b.a.a.b.c.a	ENSGT00390000008969.f	ENSGT00940000158256.h	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00390000006930
Orange clownfish	MODERN SPECIES	5	btr30 (ENSAPEG00000008155)	ENSAPEG00000008102	wipf2b (ENSAPEG00000008058)	nr1d1 (ENSAPEG00000008016)	med15 (ENSAPEG00000007980)	thoc6 (ENSAPEG00000007749)	ENSAPEG00000007719	stx1b (ENSAPEG00000007682)	ENSAPEG00000007670	ENSAPEG00000007667	ENSAPEG00000007664	ENSAPEG00000007648	si:dkeyp-113d7.1 (ENSAPEG00000007617)	krtt1c19e (ENSAPEG00000007518)	ENSAPEG00000007486	MBTD1 (ENSAPEG00000007429) ##22	spns1 (ENSAPEG00000007362)	nfatc2ip (ENSAPEG00000007344)	sgf29 (ENSAPEG00000007284)	nupr1b (ENSAPEG00000007251)	ENSAPEG00000007223	DOC2A (ENSAPEG00000007184)	ENSAPEG00000007175	ENSAPEG00000007127	ENSAPEG00000007110	ENSAPEG00000007099	ENSAPEG00000007083	mvp (ENSAPEG00000007015)	CASKIN2 (ENSAPEG00000006938)	mettl23 (ENSAPEG00000006896)	jmjd6 (ENSAPEG00000006866)
Clown anemonefish	MODERN SPECIES	2570											ENSAOCG00000013280	ENSAOCG00000013264	si:dkeyp-113d7.1 (ENSAOCG00000013254)	ENSAOCG00000013227	ENSAOCG00000013148	MBTD1 (ENSAOCG00000013132) ##22
Spiny chromis	MODERN SPECIES	1566											si:dkeyp-113d7.1 (ENSAPOG00000006806)	ENSAPOG00000006860	ENSAPOG00000006879	cyt1 (ENSAPOG00000006889)	ENSAPOG00000006913	MBTD1 (ENSAPOG00000006934) ##22	ENSAPOG00000006949	spns1 (ENSAPOG00000007008)	nfatc2ip (ENSAPOG00000007026)	sgf29 (ENSAPOG00000007072)	nupr1b (ENSAPOG00000007092)
Bicolor damselfish	MODERN SPECIES	2574																MBTD1 (ENSSPAG00000002424) ##22
Cichlidae	ANCESTRAL SPECIES	16	ENSGT01100000263538.B.c.b	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	1	ENSGT00940000177059.h	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a
Nile tilapia	MODERN SPECIES	16	ENSONIG00000038360	ENSONIG00000040428	casc3 (ENSONIG00000009337)	ENSONIG00000042536	med15 (ENSONIG00000009333)	thoc6 (ENSONIG00000009326)	ENSONIG00000042950	stx1b (ENSONIG00000009317)	prf1.3 (ENSONIG00000009313)	ENSONIG00000027119	si:dkeyp-113d7.1 (ENSONIG00000009312)	ENSONIG00000009296	ENSONIG00000009302	ENSONIG00000036158	fut9a (ENSONIG00000021444)	ENSONIG00000009290 ##22	ENSONIG00000009288	RAPGEFL1 (ENSONIG00000009285)	ENSONIG00000038576	ENSONIG00000041152	nr1d1 (ENSONIG00000009283)	ENSONIG00000025819	wipf2b (ENSONIG00000038214)	ENSONIG00000009280	ENSONIG00000041856	btr30 (ENSONIG00000009278)	ENSONIG00000009277	zgc:158376 (ENSONIG00000009273)	kpnb1 (ENSONIG00000009269)	ENSONIG00000038129	ENSONIG00000009261
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	12	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT00940000178580	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a
Haplochromini	ANCESTRAL SPECIES	12	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT00940000178580	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a
Burton s mouthbrooder	MODERN SPECIES	900														cyt1 (ENSHBUG00000016312)	ENSHBUG00000016346	ENSHBUG00000016404 ##22	ENSHBUG00000016433	RAPGEFL1 (ENSHBUG00000016490)	nr1d1 (ENSHBUG00000016545)	ENSHBUG00000016590	wipf2b (ENSHBUG00000016606)	ENSHBUG00000000493	btr30 (ENSHBUG00000016654)	ENSHBUG00000016685	zgc:158376 (ENSHBUG00000016747)	kpnb1 (ENSHBUG00000016826)	ENSHBUG00000016849	ENSHBUG00000016883
Haplochromini_A	ANCESTRAL SPECIES	33	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT00940000178580	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B	ENSGT00940000153653.a.a
P. nyererei	MODERN SPECIES	497	ENSPNYG00000011994	ENSPNYG00000011977	casc3 (ENSPNYG00000011962)	ENSPNYG00000011952	med15 (ENSPNYG00000011940)	thoc6 (ENSPNYG00000011914)	ENSPNYG00000011901	stx1b (ENSPNYG00000011863)	prf1.3 (ENSPNYG00000011800)	ENSPNYG00000011759	si:dkeyp-113d7.1 (ENSPNYG00000011744)	krtt1c19e (ENSPNYG00000011724)	ENSPNYG00000011711	cyt1 (ENSPNYG00000011691)	ENSPNYG00000011670	ENSPNYG00000011633 ##22	ENSPNYG00000011611
Haplochromini_B	ANCESTRAL SPECIES	43	ENSGT00390000006930	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT00940000178580	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00940000164286.j.b.a.a.b.f.a	ENSGT00940000160548	ENSGT00770000121664	ENSGT00940000155557.jc.a	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000163935	ENSGT00940000167798	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00440000038972	ENSGT00940000159871.b.b	ENSGT00940000154360.B
Eastern happy	MODERN SPECIES	16	ENSACLG00000016222	casc3 (ENSACLG00000016198)	ENSACLG00000016189	med15 (ENSACLG00000016126)	thoc6 (ENSACLG00000016035)	ENSACLG00000016025	ENSACLG00000016017	ENSACLG00000015980	stx1b (ENSACLG00000015910)	prf1.3 (ENSACLG00000015829)	ENSACLG00000015794	si:dkeyp-113d7.1 (ENSACLG00000015786)	krtt1c19e (ENSACLG00000015725)	cyt1 (ENSACLG00000015664)	ENSACLG00000015617	ENSACLG00000015503 ##22	ENSACLG00000015447	RAPGEFL1 (ENSACLG00000015400)	ENSACLG00000015382	nr1d1 (ENSACLG00000015371)	ENSACLG00000015357	wipf2b (ENSACLG00000015329)	ENSACLG00000015298	btr30 (ENSACLG00000015268)	ENSACLG00000015218	zgc:158376 (ENSACLG00000015165)	kpnb1 (ENSACLG00000015070)	SOCS7 (ENSACLG00000015028)	ENSACLG00000015008	ENSACLG00000014918	ENSACLG00000014903
Zebra mbuna	MODERN SPECIES	1107	casc3 (ENSMZEG00005003815)	ENSMZEG00005003830	thoc6 (ENSMZEG00005003841)	med15 (ENSMZEG00005003875)	ENSMZEG00005003901	ENSMZEG00005003915	ENSMZEG00005003929	stx1b (ENSMZEG00005003941)	prf1.3 (ENSMZEG00005003982)	ENSMZEG00005004035	si:dkeyp-113d7.1 (ENSMZEG00005004065)	krtt1c19e (ENSMZEG00005004074)	ENSMZEG00005004098	cyt1 (ENSMZEG00005004125)	ENSMZEG00005004154	MBTD1 (ENSMZEG00005004173) ##22	ENSMZEG00005004219	RAPGEFL1 (ENSMZEG00005004226)	ENSMZEG00005004246	ENSMZEG00005004253	nr1d1 (ENSMZEG00005004281)	ENSMZEG00005004294	wipf2b (ENSMZEG00005004303)	ENSMZEG00005004330	btr30 (ENSMZEG00005004410)	ENSMZEG00005004429	zgc:158376 (ENSMZEG00005004471)	kpnb1 (ENSMZEG00005004564)	ENSMZEG00005004653	ENSMZEG00005004770	ENSMZEG00005004795
Lyretail cichlid	MODERN SPECIES	427	ENSNBRG00000020578	ENSNBRG00000020570	ENSNBRG00000020559	ENSNBRG00000020545	ENSNBRG00000020537	med15 (ENSNBRG00000020518)	thoc6 (ENSNBRG00000020349)	ENSNBRG00000020314	ENSNBRG00000020302	stx1b (ENSNBRG00000020281)	ENSNBRG00000020257	si:dkeyp-113d7.1 (ENSNBRG00000020235)	krtt1c19e (ENSNBRG00000020194)	cyt1 (ENSNBRG00000019903)	ENSNBRG00000019807	ENSNBRG00000019778 ##22	ENSNBRG00000019751	RAPGEFL1 (ENSNBRG00000019720)	ENSNBRG00000019707	ENSNBRG00000019694	ENSNBRG00000019682	ENSNBRG00000019547	btr30 (ENSNBRG00000019505)	ENSNBRG00000019482	zgc:158376 (ENSNBRG00000019377)	kpnb1 (ENSNBRG00000019305)	SOCS7 (ENSNBRG00000019246)	ENSNBRG00000019168	ENSNBRG00000019118	ENSNBRG00000019099	psmd3 (ENSNBRG00000019079)
Midas cichlid	MODERN SPECIES	496				casc3 (ENSACIG00000000720)	ENSACIG00000000751	med15 (ENSACIG00000000767)	thoc6 (ENSACIG00000000810)	ENSACIG00000001025	stx1b (ENSACIG00000001073)	ENSACIG00000001101	si:dkeyp-113d7.1 (ENSACIG00000001131)	krtt1c19e (ENSACIG00000001149)	ENSACIG00000001195	cyt1 (ENSACIG00000001552)	ENSACIG00000001645	MBTD1 (ENSACIG00000002054) ##22	ENSACIG00000002103	RAPGEFL1 (ENSACIG00000002147)
Percomorphaceae_C	ANCESTRAL SPECIES		ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01050000246023	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a
Eupercaria	ANCESTRAL SPECIES	3	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a
Tetraodontidae	ANCESTRAL SPECIES	113						ENSGT00770000121664	ENSGT00940000169602	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00530000063725.p.f	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00940000156314.a	ENSGT00940000161209
Fugu	DUPLICATION
Fugu	DUPLICATION
Fugu	MODERN SPECIES	17	ENSTRUG00000000648	ENSTRUG00000000591	emc10 (ENSTRUG00000000556)	zgc:195001 (ENSTRUG00000024020)	psmd3 (ENSTRUG00000004005)	ENSTRUG00000032219	ENSTRUG00000028156	ENSTRUG00000022267	ENSTRUG00000002963	thoc6 (ENSTRUG00000002609)	ENSTRUG00000026083	stx1b (ENSTRUG00000002245)	prf1.3 (ENSTRUG00000002098)	si:dkeyp-113d7.1 (ENSTRUG00000023808)	ENSTRUG00000000933	ENSTRUG00000000806 ##22	ENSTRUG00000000779	ENSTRUG00000025686	tbc1d17 (ENSTRUG00000000420)	ENSTRUG00000021757	ccndx (ENSTRUG00000022169)	nucb1 (ENSTRUG00000000355)	PPFIA3 (ENSTRUG00000000283)	ENSTRUG00000028216	ENSTRUG00000031568	ENSTRUG00000000272	ENSTRUG00000000255	bcat2 (ENSTRUG00000000203)	ifi35 (ENSTRUG00000000199)	rpl27 (ENSTRUG00000000184)	RUNDC1 (ENSTRUG00000024896)
Fugu	MODERN SPECIES	40															ENSTRUG00000025119	ENSTRUG00000028211 ##22	ENSTRUG00000029792	RAPGEFL1 (ENSTRUG00000028438)	casc3 (ENSTRUG00000030389)	ENSTRUG00000031344
Fugu	MODERN SPECIES	17	sh2b1 (ENSTRUG00000032280)	ENSTRUG00000028628	ENSTRUG00000021003	ENSTRUG00000000816	mettl23 (ENSTRUG00000000822)	jmjd6 (ENSTRUG00000000851)	mvp (ENSTRUG00000000022)	DOC2A (ENSTRUG00000033316)	ENSTRUG00000024002	ENSTRUG00000004475	ENSTRUG00000030932	ENSTRUG00000028100	ENSTRUG00000020495	prf1.3 (ENSTRUG00000026365)	ENSTRUG00000023172	ENSTRUG00000032961 ##22	RAPGEFL1 (ENSTRUG00000000773)	casc3 (ENSTRUG00000000673)	ENSTRUG00000000648	ENSTRUG00000000591	emc10 (ENSTRUG00000000556)	zgc:195001 (ENSTRUG00000024020)	psmd3 (ENSTRUG00000004005)	ENSTRUG00000032219	ENSTRUG00000028156	ENSTRUG00000022267	ENSTRUG00000002963	thoc6 (ENSTRUG00000002609)	ENSTRUG00000026083	stx1b (ENSTRUG00000002245)	prf1.3 (ENSTRUG00000002098)
Eupecaria_A	ANCESTRAL SPECIES	5	ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a
Ballan wrasse	MODERN SPECIES	937													ENSLBEG00000012403	ENSLBEG00000012156	ENSLBEG00000011343	MBTD1 (ENSLBEG00000010925) ##22	ENSLBEG00000010872	RAPGEFL1 (ENSLBEG00000010847)
Eupecaria_B	ANCESTRAL SPECIES		ENSGT00770000121664	ENSGT00940000160548	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a
Eupecaria_C	ANCESTRAL SPECIES	43	ENSGT00940000165499.a	ENSGT00940000165670	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT01100000265279	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	63	ENSGT00940000165499.a	ENSGT00940000165670	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT01100000265279	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a
European seabass	MODERN SPECIES	12	ENSDLAG00005034074	ENSDLAG00005002810	ENSDLAG00005003803	ENSDLAG00005026795	ENSDLAG00005004069	ENSDLAG00005004453	stx1b (ENSDLAG00005030268)	prf1.3 (ENSDLAG00005004674)	ENSDLAG00005006656	ENSDLAG00005034619	ENSDLAG00005027824	si:dkeyp-113d7.1 (ENSDLAG00005016048)	ENSDLAG00005016053	ENSDLAG00005005169	ENSDLAG00005005153	ENSDLAG00005017873 ##22	ENSDLAG00005017911	ENSDLAG00005017922	ENSDLAG00005026399	ENSDLAG00005032714	ENSDLAG00005032474	ENSDLAG00005032711	ENSDLAG00005033517	ENSDLAG00005032297	ENSDLAG00005029554	ENSDLAG00005028816	ENSDLAG00005033359	ENSDLAG00005005527	ENSDLAG00005027355	ENSDLAG00005023777	ENSDLAG00005006975
Large yellow croaker	MODERN SPECIES	8	ENSLCRG00005022278	wipf2b (ENSLCRG00005022339)	ENSLCRG00005022341	ENSLCRG00005022342	med15 (ENSLCRG00005022346)	thoc6 (ENSLCRG00005022351)	ENSLCRG00005022357	ENSLCRG00005022358	stx1b (ENSLCRG00005022359)	prf1.3 (ENSLCRG00005022361)	ENSLCRG00005022362	ENSLCRG00005022363	si:dkeyp-113d7.1 (ENSLCRG00005022364)	krtt1c19e (ENSLCRG00005022365)	cyt1l (ENSLCRG00005022367)	ENSLCRG00005022369 ##22	ENSLCRG00005014372	ENSLCRG00005014377	casc3 (ENSLCRG00005014416)	ENSLCRG00005014440	ENSLCRG00005014447	DOC2A (ENSLCRG00005014457)	ENSLCRG00005014494	ENSLCRG00005014501	ENSLCRG00005014514	mvp (ENSLCRG00005014628)
Gilthead seabream	MODERN SPECIES	15	ENSSAUG00010014204	ENSSAUG00010014206	med15 (ENSSAUG00010014209)	si:dkeyp-113d7.1 (ENSSAUG00010014213)	ENSSAUG00010014214	prf1.3 (ENSSAUG00010014217)	stx1b (ENSSAUG00010014230)	ENSSAUG00010014467	thoc6 (ENSSAUG00010014491)	ENSSAUG00010015568	ENSSAUG00010015570	ENSSAUG00010015575	ENSSAUG00010015604	ENSSAUG00010015607	ENSSAUG00010015608	ENSSAUG00010015617 ##22	ENSSAUG00010015632	RAPGEFL1 (ENSSAUG00010015640)	casc3 (ENSSAUG00010015902)	ENSSAUG00010015908	ENSSAUG00010015910	ENSSAUG00010015912	ENSSAUG00010015915	psmd3 (ENSSAUG00010015928)	ENSSAUG00010016243	ENSSAUG00010016247	ENSSAUG00010016249	ENSSAUG00010016251	ENSSAUG00010016254	ENSSAUG00010016256	ENSSAUG00010016259
Perciformes	ANCESTRAL SPECIES	1	ENSGT00940000167798	ENSGT00940000162814	ENSGT00940000165499.a	ENSGT00440000033919	ENSGT00940000155557.jc.a	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000008969	ENSGT00940000158256.h	ENSGT00940000156867	ENSGT00510000048008	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b
Cottioidei	ANCESTRAL SPECIES	1	ENSGT00550000074898	ENSGT00940000167798	ENSGT00940000162814	ENSGT00940000165499.a	ENSGT00440000033919	ENSGT00940000155557.jc.a	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000008969	ENSGT00940000158256.h	ENSGT00940000156867	ENSGT00510000048008	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00390000007119	ENSGT00390000005976.b	ENSGT00940000157795.g.b
Lumpfish	MODERN SPECIES	23	btr30 (ENSCLMG00005014424)	ENSCLMG00005014426	UTP18 (ENSCLMG00005014429)	ENSCLMG00005014626	med15 (ENSCLMG00005014629)	thoc6 (ENSCLMG00005014631)	ENSCLMG00005014656	ENSCLMG00005014659	ENSCLMG00005000062	stx1b (ENSCLMG00005000125)	ENSCLMG00005000190	ENSCLMG00005000194	si:dkeyp-113d7.1 (ENSCLMG00005000198)	krtt1c19e (ENSCLMG00005000207)	ENSCLMG00005000244	ENSCLMG00005000556 ##22	ENSCLMG00005000567	RAPGEFL1 (ENSCLMG00005000578)	casc3 (ENSCLMG00005000632)	ENSCLMG00005000633	mvp (ENSCLMG00005000662)	CASKIN2 (ENSCLMG00005001051)	ENSCLMG00005001162	ENSCLMG00005001163	jmjd6 (ENSCLMG00005001164)	mettl23 (ENSCLMG00005001165)	ENSCLMG00005001166	ENSCLMG00005001168	ENSCLMG00005001169	nupr1b (ENSCLMG00005001170)	sgf29 (ENSCLMG00005001171)
Perciformes_a	ANCESTRAL SPECIES	75						ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00390000008969	ENSGT00940000158256.h
Pike perch	MODERN SPECIES	153	ENSSLUG00000004781	ENSSLUG00000004767	ENSSLUG00000004761	ENSSLUG00000004753	ENSSLUG00000004750	ENSSLUG00000004743	ENSSLUG00000004738	ENSSLUG00000004722	ENSSLUG00000004707	ENSSLUG00000004528	ENSSLUG00000004505	ENSSLUG00000004473	ENSSLUG00000004289	ENSSLUG00000004264	ENSSLUG00000004245	ENSSLUG00000004170 ##22	ENSSLUG00000004158	RAPGEFL1 (ENSSLUG00000004138)	casc3 (ENSSLUG00000004122)	ENSSLUG00000004115	ENSSLUG00000004112	mvp (ENSSLUG00000003562)	CASKIN2 (ENSSLUG00000003435)	ENSSLUG00000003355	ST6GALNAC2 (ENSSLUG00000003317)
Channel bull blenny	MODERN SPECIES	105											stx1b (ENSCGOG00000015906)	krt92 (ENSCGOG00000015526)	ENSCGOG00000015515	casc3 (ENSCGOG00000015508)	ENSCGOG00000015507	ENSCGOG00000015030 ##22	ENSCGOG00000015019	RAPGEFL1 (ENSCGOG00000014961)
Percomorphaceae_D	ANCESTRAL SPECIES	1	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01050000246023	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a
Anabantaria	ANCESTRAL SPECIES	6	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000181841	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00960000186816
Anabantoidei	ANCESTRAL SPECIES	25	ENSGT00950000182916.a.b.a.a.a.b.a.b	ENSGT00390000013719	ENSGT00950000182917.a.b.b	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a	ENSGT00390000015229	ENSGT00960000186816
Climbing perch	MODERN SPECIES	21	zgc:158403 (ENSATEG00000016676)	ENSATEG00000025625	ENSATEG00000025211	ENSATEG00000026631	ENSATEG00000016788	ENSATEG00000016804	ENSATEG00000016814	ENSATEG00000016825	stx1b (ENSATEG00000016855)	prf1.3 (ENSATEG00000016901)	ENSATEG00000017017	si:dkeyp-113d7.1 (ENSATEG00000017027)	krtt1c19e (ENSATEG00000017048)	cyt1 (ENSATEG00000017081)	ENSATEG00000017095	ENSATEG00000017106 ##22	ENSATEG00000017143	ENSATEG00000017159	ENSATEG00000017196	ENSATEG00000017219	mettl23 (ENSATEG00000017235)	JMJD6 (ENSATEG00000017255)	si:ch73-366l1.5 (ENSATEG00000017298)	ST6GALNAC2 (ENSATEG00000017313)	ENSATEG00000017341	mvp (ENSATEG00000017429)	ENSATEG00000017496	ENSATEG00000027527	ENSATEG00000017522	nupr1b (ENSATEG00000017559)	sgf29 (ENSATEG00000029467)
Siamese fighting fish	MODERN SPECIES	19	ENSBSLG00000009833	ENSBSLG00000009852	eif3d (ENSBSLG00000009901)	ENSBSLG00000009968	med15 (ENSBSLG00000009984)	thoc6 (ENSBSLG00000010046)	ENSBSLG00000010186	ENSBSLG00000010191	stx1b (ENSBSLG00000010199)	ENSBSLG00000010250	si:dkeyp-113d7.1 (ENSBSLG00000010251)	krtt1c19e (ENSBSLG00000010256)	ENSBSLG00000010268	ENSBSLG00000010319	ENSBSLG00000010331	MBTD1 (ENSBSLG00000010341) ##22	ENSBSLG00000010363	RAPGEFL1 (ENSBSLG00000010367)	casc3 (ENSBSLG00000010387)	ENSBSLG00000010391	ENSBSLG00000010393	mettl23 (ENSBSLG00000010397)	jmjd6 (ENSBSLG00000010399)	si:ch73-366l1.5 (ENSBSLG00000010413)	ST6GALNAC2 (ENSBSLG00000010420)	CASKIN2 (ENSBSLG00000010469)	mvp (ENSBSLG00000011407)	ENSBSLG00000012456	ENSBSLG00000012464	ENSBSLG00000012492	nupr1b (ENSBSLG00000012495)
Zig-zag eel	MODERN SPECIES	22	ENSMAMG00000025259	ENSMAMG00000009638	ENSMAMG00000009624	ENSMAMG00000009604	ENSMAMG00000025353	ENSMAMG00000009589	stx1b (ENSMAMG00000009559)	ENSMAMG00000009548	si:dkeyp-113d7.1 (ENSMAMG00000009536)	krtt1c19e (ENSMAMG00000007744)	ENSMAMG00000007404	ENSMAMG00000007353	ENSMAMG00000005403	ENSMAMG00000026261	ENSMAMG00000005361	ENSMAMG00000005329 ##22	ENSMAMG00000005313	ENSMAMG00000005246	ENSMAMG00000005235	ENSMAMG00000027479	ENSMAMG00000005137	ENSMAMG00000005089	ENSMAMG00000024997	ENSMAMG00000005076	ENSMAMG00000005068	ENSMAMG00000005040	cyb561 (ENSMAMG00000005023)	ENSMAMG00000004986	ENSMAMG00000004959	ENSMAMG00000004918	ENSMAMG00000004905
Carangaria	ANCESTRAL SPECIES	26	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01050000246023	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a
Carangaria_A	ANCESTRAL SPECIES	65	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930	ENSGT01100000263538.B.c.b	ENSGT01100000263538.B.c.a	ENSGT00510000048008	ENSGT00940000156867	ENSGT01100000263724	ENSGT00940000160433	ENSGT00940000158256.h	ENSGT00390000008969	ENSGT00940000161103.a	ENSGT01100000263556.a.a.q.c.b.a	ENSGT00940000159141.j.a	ENSGT00530000064242.a
Seriola	ANCESTRAL SPECIES	123	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000160548	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT00940000164729.b	ENSGT01030000234627.a.a.d.b	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00950000182969.B.d	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930
Yellowtail amberjack	MODERN SPECIES	2027															ENSSLDG00000009500	ENSSLDG00000009515 ##22
Greater amberjack	MODERN SPECIES	68	ENSSDUG00000015981	nr1d1 (ENSSDUG00000015991)	ENSSDUG00000016011	ENSSDUG00000016020	ENSSDUG00000016032	wipf2b (ENSSDUG00000016040)	ENSSDUG00000016064	btr30 (ENSSDUG00000016078)	ENSSDUG00000016145	zgc:158376 (ENSSDUG00000016173)	kpnb1 (ENSSDUG00000016218)	ENSSDUG00000016259	ENSSDUG00000016316	ENSSDUG00000016332	ENSSDUG00000016378	MBTD1 (ENSSDUG00000016780) ##22	ENSSDUG00000016824	RAPGEFL1 (ENSSDUG00000016865)	casc3 (ENSSDUG00000016893)	ENSSDUG00000016916	ENSSDUG00000016927
Barramundi perch	MODERN SPECIES	484	nr1d1 (ENSLCAG00010021991)	ENSLCAG00010021975	med15 (ENSLCAG00010021969)	thoc6 (ENSLCAG00010021931)	ENSLCAG00010021912	prf1.3 (ENSLCAG00010021901)	stx1b (ENSLCAG00010021880)	ENSLCAG00010021867	si:dkeyp-113d7.1 (ENSLCAG00010021860)	krtt1c19e (ENSLCAG00010021857)	ENSLCAG00010021808	ENSLCAG00010021788	ENSLCAG00010021780	ENSLCAG00010021753	ENSLCAG00010021742	MBTD1 (ENSLCAG00010021698) ##22
Pleuronectoidei	ANCESTRAL SPECIES	65	ENSGT00940000155557.jc.a	ENSGT00770000121664	ENSGT00940000169602	ENSGT00730000111140	ENSGT00390000015278	ENSGT00940000164729.a.a.c	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT00400000024346	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.b	ENSGT00940000181841	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000164818.c.b	ENSGT00940000160144	ENSGT00390000006930
Tongue sole	MODERN SPECIES	8	amdhd2 (ENSCSEG00000009766)	ENSCSEG00000009085	ENSCSEG00000009031	flr (ENSCSEG00000008953)	si:ch211-76l23.7 (ENSCSEG00000008935)	alg1 (ENSCSEG00000008924)	eef2kmt (ENSCSEG00000008895)	kat8 (ENSCSEG00000008855)	rbfox1 (ENSCSEG00000008840)	ENSCSEG00000008828	pigq (ENSCSEG00000008800)	rab40c (ENSCSEG00000008781)	xylt1 (ENSCSEG00000008700)	ENSCSEG00000008684	ENSCSEG00000008273	ENSCSEG00000008241 ##22	mvp (ENSCSEG00000008233)	ENSCSEG00000008223	cdc27 (ENSCSEG00000008193)	ENSCSEG00000008176	psmd3 (ENSCSEG00000008146)	ENSCSEG00000008132	ENSCSEG00000008125	rdm1 (ENSCSEG00000008110)	ENSCSEG00000008072	ENSCSEG00000008057	ENSCSEG00000008043	ENSCSEG00000008030	kpnb1 (ENSCSEG00000007991)	ENSCSEG00000007943	btr30 (ENSCSEG00000007930)
Turbot	MODERN SPECIES	10	ENSSMAG00000033581	ENSSMAG00000026032	ENSSMAG00000023959	ENSSMAG00000032532	stx1b (ENSSMAG00000032301)	prf1.3 (ENSSMAG00000035083)	ENSSMAG00000026143	si:dkeyp-113d7.1 (ENSSMAG00000024728)	krtt1c19e (ENSSMAG00000015155)	ENSSMAG00000029222	ENSSMAG00000026115	ENSSMAG00000022413	cyt1 (ENSSMAG00000015224)	ENSSMAG00000037295	ENSSMAG00000015961	ENSSMAG00000015974 ##22	ENSSMAG00000030508	ENSSMAG00000016056	ENSSMAG00000016096	ENSSMAG00000016107	ENSSMAG00000016128	ENSSMAG00000016141	nlk1 (ENSSMAG00000016150)	ENSSMAG00000016191	cdipt (ENSSMAG00000016219)	ENSSMAG00000016241	ENSSMAG00000028984	sh2b1 (ENSSMAG00000016334)	atxn2l (ENSSMAG00000016365)	ENSSMAG00000026927	spns1 (ENSSMAG00000016503)
Pinecone sodierfish	MODERN SPECIES	22	ENSMMDG00005000830	ENSMMDG00005000861	ENSMMDG00005000865	ENSMMDG00005000868	ENSMMDG00005000870	ENSMMDG00005000873	ENSMMDG00005000939	ENSMMDG00005000949	krtt1c19e (ENSMMDG00005000991)	si:dkeyp-113d7.1 (ENSMMDG00005000993)	ENSMMDG00005000995	ENSMMDG00005000998	prf1.3 (ENSMMDG00005001012)	stx1b (ENSMMDG00005001030)	ENSMMDG00005001045	ENSMMDG00005001056 ##22	ENSMMDG00005001605	RAPGEFL1 (ENSMMDG00005001614)	ENSMMDG00005001624	ENSMMDG00005001635	casc3 (ENSMMDG00005001644)	ENSMMDG00005001650	ENSMMDG00005001655	med15 (ENSMMDG00005001664)	nr1d1 (ENSMMDG00005001723)	ENSMMDG00005001749	ENSMMDG00005001755	wipf2b (ENSMMDG00005001764)	ENSMMDG00005001795	btr30 (ENSMMDG00005001861)	ENSMMDG00005001880
Cod	MODERN SPECIES	11	copz2 (ENSGMOG00000004484)	prr15la (ENSGMOG00000028853)	ENSGMOG00000019381	ENSGMOG00000034869	ENSGMOG00000025703	eif1 (ENSGMOG00000029255)	ENSGMOG00000028806	ENSGMOG00000011411	ENSGMOG00000017336	krtt1c19e (ENSGMOG00000011417)	si:dkeyp-113d7.1 (ENSGMOG00000023517)	ENSGMOG00000022651	stx1b (ENSGMOG00000011458)	ENSGMOG00000031035	ENSGMOG00000022279	ENSGMOG00000016156 ##22	ENSGMOG00000033754	RAPGEFL1 (ENSGMOG00000017804)	CASC3 (ENSGMOG00000027781)	ENSGMOG00000030135	nr1d1 (ENSGMOG00000022882)	ENSGMOG00000033467	ENSGMOG00000024952	ENSGMOG00000033610	ENSGMOG00000011563	ENSGMOG00000031951	ENSGMOG00000032156	ENSGMOG00000011607	ENSGMOG00000028429	ENSGMOG00000023369	ENSGMOG00000025948
Otomorpha	ANCESTRAL SPECIES	27	ENSGT00940000154534.b.a	ENSGT00940000157439.a	ENSGT00940000153704.B.d	ENSGT01030000234646.B.a.a.a.a.b	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000167798	ENSGT00940000162814	ENSGT00940000154717.qc	ENSGT00940000163935	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279.h	ENSGT00390000017328.a.a	ENSGT00940000153653.a.a	ENSGT00940000154360.B	ENSGT01030000234785	ENSGT00950000183145.A.b.a
Clupeiformes	ANCESTRAL SPECIES	29	ENSGT00940000154534.b.a	ENSGT00940000157439.a	ENSGT00940000153704.B.d	ENSGT01030000234646.B.a.a.a.a.b	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.w	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000167798	ENSGT00940000163935	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279.h	ENSGT00390000017328.a.a	ENSGT00940000153653.a.a	ENSGT00940000154360.B
Atlantic herring	MODERN SPECIES		cyt1 (ENSCHAG00000012963)	ENSCHAG00000012589	ENSCHAG00000012341	ENSCHAG00000012123	ENSCHAG00000011818	ENSCHAG00000011786	ENSCHAG00000011752	ENSCHAG00000011748	ENSCHAG00000011704	si:dkeyp-113d7.1 (ENSCHAG00000011692)	ENSCHAG00000011686	ENSCHAG00000011616	prf1.3 (ENSCHAG00000011524)	stx1b (ENSCHAG00000011421)	ENSCHAG00000011363	ENSCHAG00000011067 ##22	nme2b.2 (ENSCHAG00000010977)	UTP18 (ENSCHAG00000010661)	btr30 (ENSCHAG00000010646)	zgc:158376 (ENSCHAG00000010625)	ENSCHAG00000010525	kpnb1 (ENSCHAG00000010097)	ENSCHAG00000010075	ENSCHAG00000010061	ENSCHAG00000010026	ENSCHAG00000009977	ENSCHAG00000009952	ENSCHAG00000009773	nsfa (ENSCHAG00000007868)	psmd11a (ENSCHAG00000007627)	SOX9 (ENSCHAG00000007602)
Denticle herring	MODERN SPECIES	17	copz2 (ENSDCDG00000023665)	prr15la (ENSDCDG00000023656)	ENSDCDG00000023398	TBKBP1 (ENSDCDG00000023381)	pdk2b (ENSDCDG00000022777)	wipf2b (ENSDCDG00000022755)	JUP (ENSDCDG00000020697)	eif1 (ENSDCDG00000020640)	krt91 (ENSDCDG00000020639)	ENSDCDG00000020275	krtt1c19e (ENSDCDG00000019925)	si:dkeyp-113d7.1 (ENSDCDG00000019912)	ENSDCDG00000019910	stx1b (ENSDCDG00000019314)	ENSDCDG00000019296	MBTD1 (ENSDCDG00000019047) ##22	nme2b.1 (ENSDCDG00000018933)	UTP18 (ENSDCDG00000018851)	btr30 (ENSDCDG00000018840)	ENSDCDG00000018836	ENSDCDG00000018821	kpnb1 (ENSDCDG00000018762)	ENSDCDG00000018713	SAMD14 (ENSDCDG00000018692)	ENSDCDG00000018683	psmd3 (ENSDCDG00000018535)	ENSDCDG00000018529	ENSDCDG00000018524	ENSDCDG00000018507	ENSDCDG00000018482	hspb9 (ENSDCDG00000018469)
Otophysi	ANCESTRAL SPECIES	189	ENSGT00940000153814.b.e	ENSGT00940000156331.a.b	ENSGT00390000012959.a.g	ENSGT00940000154664.h	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000161569	ENSGT00940000165670	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000167798	ENSGT00940000162814	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279.h	ENSGT00390000017328.b	ENSGT00390000017328.a.b	ENSGT00940000153653.a.a	ENSGT00510000049316
Characiphysae	ANCESTRAL SPECIES	168				ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.w	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000161569	ENSGT00940000165670	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000167798	ENSGT00940000162814	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279.h	ENSGT00390000017328.b	ENSGT00940000153653.a.a
Characiphysae_b	ANCESTRAL SPECIES	96			ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.w	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f	ENSGT01090000260030.a.b.b.b	ENSGT01030000235009	ENSGT00940000164067.A	ENSGT01030000234627.a.a.d.b	ENSGT00940000175288	ENSGT00940000164729.a.a	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000161569	ENSGT00940000165670	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000165499.a	ENSGT00940000167798	ENSGT00940000162814	ENSGT00550000074898	ENSGT00940000156314.a	ENSGT00940000160279.h	ENSGT00390000017328.b	ENSGT00940000153653.a.a	ENSGT00510000049316	ENSGT00940000153704.B.d	ENSGT00940000157439.a
Characoidei	ANCESTRAL SPECIES	273										ENSGT00940000164729.a.a	ENSGT01030000234627.a.a.d.b	ENSGT00940000164067.A	ENSGT01030000235009	ENSGT01090000260030.a.b.b.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f	ENSGT00940000153840.a.a.a.b ##22	ENSGT00940000161569	ENSGT00940000165670	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.w	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00390000015789	ENSGT00940000156395.f	ENSGT00940000155557.jc.a
Red-bellied piranha	MODERN SPECIES	1454																MBTD1 (ENSPNAG00000025340) ##22	NME2 (ENSPNAG00000025269)	ENSPNAG00000006359	mrpl9 (ENSPNAG00000025239)	prcc (ENSPNAG00000025223)
Mexicana tetra	MODERN SPECIES	15	s100a10a (ENSAMXG00000009806)	trim46b (ENSAMXG00000009789)	dpm3 (ENSAMXG00000025548)	efna1a (ENSAMXG00000009770)	JUP (ENSAMXG00000005521)	eif1 (ENSAMXG00000031547)	krt91 (ENSAMXG00000001164)	ENSAMXG00000031543	ENSAMXG00000040136	krtt1c19e (ENSAMXG00000029377)	ENSAMXG00000001155	stx1b (ENSAMXG00000036043)	ENSAMXG00000033402	si:dkeyp-113d7.1 (ENSAMXG00000025898)	ENSAMXG00000007909	MBTD1 (ENSAMXG00000007937) ##22	nme2b.1 (ENSAMXG00000034136)	NME2 (ENSAMXG00000041731)	ENSAMXG00000007967	btr30 (ENSAMXG00000007984)	zgc:158376 (ENSAMXG00000008005)	UBE2M (ENSAMXG00000036321)	kpnb1 (ENSAMXG00000041903)	ENSAMXG00000008043	SAMD14 (ENSAMXG00000008049)	ENSAMXG00000031233	psmd3 (ENSAMXG00000030231)	zgc:85936 (ENSAMXG00000040226)	TBKBP1 (ENSAMXG00000008086)	ENSAMXG00000008092	42sp43 (ENSAMXG00000008097)
Electric eel	MODERN SPECIES	252			wipf2b (ENSEEEG00000016071)	JUP (ENSEEEG00000016074)	eif1 (ENSEEEG00000016079)	ENSEEEG00000016113	ENSEEEG00000016297	krtt1c19e (ENSEEEG00000016313)	ENSEEEG00000016592	si:dkeyp-113d7.1 (ENSEEEG00000016593)	ENSEEEG00000016594	prf1.3 (ENSEEEG00000016598)	stx1b (ENSEEEG00000016619)	ENSEEEG00000016620	ENSEEEG00000016622	MBTD1 (ENSEEEG00000016625) ##22	nme2b.1 (ENSEEEG00000016628)	UTP18 (ENSEEEG00000016629)	btr30 (ENSEEEG00000016632)	zgc:158376 (ENSEEEG00000016633)	UBE2M (ENSEEEG00000016636)	kpnb1 (ENSEEEG00000016639)	ENSEEEG00000016643	SAMD14 (ENSEEEG00000016646)	ENSEEEG00000016656	psmd3 (ENSEEEG00000016673)	zgc:85936 (ENSEEEG00000017033)	TBKBP1 (ENSEEEG00000017034)	ENSEEEG00000017038	42sp43 (ENSEEEG00000017040)	STAC2 (ENSEEEG00000017041)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a.b ##22
Golden-line barbel	MODERN SPECIES	35	PGS1 (ENSSGRG00000018808)	cyth1b (ENSSGRG00000018705)	timp2a (ENSSGRG00000018704)	sfxn2 (ENSSGRG00000018457)	arl3b (ENSSGRG00000018455)	trim8b (ENSSGRG00000018454)	mfsd13a (ENSSGRG00000018445)	SEMA4G (ENSSGRG00000018443)	mrpl43 (ENSSGRG00000018442)	twnk (ENSSGRG00000018441)	galk1 (ENSSGRG00000018438)	llgl2 (ENSSGRG00000016644)	ENSSGRG00000016627	TMEM94 (ENSSGRG00000016562)	tdrkh (ENSSGRG00000016546)	ENSSGRG00000016544 ##22	MBTD1 (ENSSGRG00000016543) ##22	nherf1a (ENSSGRG00000016542)	narf (ENSSGRG00000016541)	cybc1 (ENSSGRG00000016540)	ccdc57 (ENSSGRG00000013383)	slc16a3b (ENSSGRG00000013317)	ENSSGRG00000013316	c1qtnf1 (ENSSGRG00000013313)	RBFOX3 (ENSSGRG00000013310)	ENPP7 (ENSSGRG00000013308)	nog3 (ENSSGRG00000013307)	ENSSGRG00000013303	ENSSGRG00000013294	hlfb (ENSSGRG00000013292)	ENSSGRG00000013286
Sarcopterygii	ANCESTRAL SPECIES	362									ENSGT00940000164726	ENSGT00940000163867	ENSGT00950000183213.a.b	ENSGT00390000007792	ENSGT00940000160624	ENSGT00940000154208.c.b	ENSGT00940000153496.a.b	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00440000033919	ENSGT00940000155223.b
Tetrapoda	ANCESTRAL SPECIES	30	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213
Amniota	ANCESTRAL SPECIES	14	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Mammalia	ANCESTRAL SPECIES	12	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Theria	ANCESTRAL SPECIES	25	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555.a	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT01050000244940.a.a.j.a	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00940000159622	ENSGT00440000033919	ENSGT00940000166077	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Marsupialia_b	ANCESTRAL SPECIES	26	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555.a	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT01050000244940.a.a.j.a	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00940000159622	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Diprotodontia	ANCESTRAL SPECIES	33	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555.a	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT01050000244940.a.a.j.a	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00940000159622	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Diprotodontia_a	ANCESTRAL SPECIES	32	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555.a	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT01050000244940.a.a.j.a	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00940000159622	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.wb	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00940000158206.e	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664.a	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565
Common wonbat	MODERN SPECIES	1034	NOG (ENSVURG00010013608)	ANKFN1 (ENSVURG00010013622)	PCTP (ENSVURG00010013660)	SMIM36 (ENSVURG00010013672)	ENSVURG00010013684	ENSVURG00010013698	STXBP4 (ENSVURG00010013723)	ENSVURG00010013745	KIF2B (ENSVURG00010013754)	ENSVURG00010013761	ENSVURG00010013770	ENSVURG00010013776	CA10 (ENSVURG00010013781)	ENSVURG00010013794	UTP18 (ENSVURG00010013804)	MBTD1 (ENSVURG00010013815) ##22	NME2 (ENSVURG00010013834)	NME1 (ENSVURG00010013853)	SPAG9 (ENSVURG00010013867)	ENSVURG00010013931	TOB1 (ENSVURG00010013935)	WFIKKN2 (ENSVURG00010013937)	ENSVURG00010013940	ENSVURG00010013942	LUC7L3 (ENSVURG00010013948)	ENSVURG00010014322	MYCBPAP (ENSVURG00010021400)	RSAD1 (ENSVURG00010021420)	ACSF2 (ENSVURG00010021431)	CHAD (ENSVURG00010021444) ##23	LRRC59 (ENSVURG00010021447)
koala	MODERN SPECIES	230													CA10 (ENSPCIG00000000719)	ENSPCIG00000032327	UTP18 (ENSPCIG00000000695)	MBTD1 (ENSPCIG00000000651) ##22	NME2 (ENSPCIG00000031073)	NME1 (ENSPCIG00000000603)	SPAG9 (ENSPCIG00000022781)	ENSPCIG00000013674	TOB1 (ENSPCIG00000030166)	WFIKKN2 (ENSPCIG00000030168)	ENSPCIG00000030170	LUC7L3 (ENSPCIG00000012372)	ANKRD40 (ENSPCIG00000012374)	ENSPCIG00000030174	CACNA1G (ENSPCIG00000030193)	ENSPCIG00000032449	SPATA20 (ENSPCIG00000030204)	EPN3 (ENSPCIG00000030206)	MYCBPAP (ENSPCIG00000030210)
Tasmanian devil	MODERN SPECIES	3	DGKE (ENSSHAG00000001405)	C17orf67 (ENSSHAG00000002983)	NOG (ENSSHAG00000025585)	ANKFN1 (ENSSHAG00000008960)	PCTP (ENSSHAG00000020681)	ENSSHAG00000021921	MMD (ENSSHAG00000031217)	ENSSHAG00000031570	ENSSHAG00000030237	STXBP4 (ENSSHAG00000016013)	TOM1L1 (ENSSHAG00000016556)	KIF2B (ENSSHAG00000007329)	CA10 (ENSSHAG00000011074)	ENSSHAG00000013719	UTP18 (ENSSHAG00000014070)	MBTD1 (ENSSHAG00000014242) ##22	ENSSHAG00000014470	SPAG9 (ENSSHAG00000014888)	TOB1 (ENSSHAG00000015761)	WFIKKN2 (ENSSHAG00000021968)	LUC7L3 (ENSSHAG00000016168)	ANKRD40 (ENSSHAG00000016288)	ENSSHAG00000016312	CACNA1G (ENSSHAG00000005640)	SPATA20 (ENSSHAG00000005339)	ENSSHAG00000004142	EPN3 (ENSSHAG00000004684)	RSAD1 (ENSSHAG00000002422)	CHAD (ENSSHAG00000001564) ##23	ACSF2 (ENSSHAG00000001145)	LRRC59 (ENSSHAG00000022483)
Eutheria	ANCESTRAL SPECIES	4	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000166077	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Glires	ANCESTRAL SPECIES	3	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Myomorpha	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Muroidea	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Cricetidae	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Golden Hamster	MODERN SPECIES	674	Dgke (ENSMAUG00000020629)	Gm525 (ENSMAUG00000022267)	Nog (ENSMAUG00000008457)	ENSMAUG00000011292	Ankfn1 (ENSMAUG00000019536)	Pctp (ENSMAUG00000008171)	Tmem100 (ENSMAUG00000019557)	Mmd (ENSMAUG00000009440)	Hlf (ENSMAUG00000011516)	Stxbp4 (ENSMAUG00000010115)	ENSMAUG00000008185	Tom1l1 (ENSMAUG00000014320)	Kif2b (ENSMAUG00000008566)	Car10 (ENSMAUG00000017037)	Utp18 (ENSMAUG00000022024)	Mbtd1 (ENSMAUG00000020463) ##22	ENSMAUG00000002359	ENSMAUG00000019047	Tob1 (ENSMAUG00000008330)	Wfikkn2 (ENSMAUG00000014088)	Luc7l3 (ENSMAUG00000016610)	Ankrd40 (ENSMAUG00000010247)	ENSMAUG00000011672	ENSMAUG00000001026	ENSMAUG00000015351	Spata20 (ENSMAUG00000013601)	Epn3 (ENSMAUG00000009495)	Mycbpap (ENSMAUG00000016107)	Rsad1 (ENSMAUG00000008431)	Acsf2 (ENSMAUG00000020585)	Chad (ENSMAUG00000020237) ##23
Chinese hamster chok1gshd	MODERN SPECIES	33	Nog (ENSCGRG00001001979)	ENSCGRG00001020352	Ankfn1 (ENSCGRG00001009369)	Pctp (ENSCGRG00001015293)	Tmem100 (ENSCGRG00001011394)	ENSCGRG00001011423	ENSCGRG00001000174	Mmd (ENSCGRG00001021487)	Hlf (ENSCGRG00001013188)	Stxbp4 (ENSCGRG00001023598)	Cox11 (ENSCGRG00001011330)	Tom1l1 (ENSCGRG00001012617)	Kif2b (ENSCGRG00001011166)	Car10 (ENSCGRG00001017785)	Utp18 (ENSCGRG00001008786)	Mbtd1 (ENSCGRG00001008409) ##22	Nme2 (ENSCGRG00001012585)	Nme1 (ENSCGRG00001022109)	ENSCGRG00001010907	Spag9 (ENSCGRG00001020494)	Tob1 (ENSCGRG00001009633)	Wfikkn2 (ENSCGRG00001022356)	Luc7l3 (ENSCGRG00001009809)	ENSCGRG00001020484	Abcc3 (ENSCGRG00001010018)	Cacna1g (ENSCGRG00001002871)	Spata20 (ENSCGRG00001006141)	Epn3 (ENSCGRG00001009708)	Mycbpap (ENSCGRG00001004065)	Rsad1 (ENSCGRG00001020971)	Acsf2 (ENSCGRG00001006504)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Northern American deer mouse	MODERN SPECIES	21	Ankfn1 (ENSPEMG00000022390)	Pctp (ENSPEMG00000021820)	Tmem100 (ENSPEMG00000024664)	ENSPEMG00000000809	ENSPEMG00000027921	Mmd (ENSPEMG00000000328)	Hlf (ENSPEMG00000029046)	Stxbp4 (ENSPEMG00000001411)	Cox11 (ENSPEMG00000024142)	Tom1l1 (ENSPEMG00000022203)	Kif2b (ENSPEMG00000027696)	ENSPEMG00000005281	ENSPEMG00000028526	Car10 (ENSPEMG00000000626)	Utp18 (ENSPEMG00000023374)	Mbtd1 (ENSPEMG00000023505) ##22	Nme2 (ENSPEMG00000025029)	Nme1 (ENSPEMG00000024386)	Spag9 (ENSPEMG00000021999)	Tob1 (ENSPEMG00000004859)	Wfikkn2 (ENSPEMG00000022904)	Ankrd40cl (ENSPEMG00000027053)	Luc7l3 (ENSPEMG00000022694)	Ankrd40 (ENSPEMG00000027514)	Abcc3 (ENSPEMG00000021277)	Cacna1g (ENSPEMG00000021107)	Spata20 (ENSPEMG00000024043)	Epn3 (ENSPEMG00000021011)	Mycbpap (ENSPEMG00000021825)	Rsad1 (ENSPEMG00000021383)	Acsf2 (ENSPEMG00000020965)
Prairie vole	MODERN SPECIES	15	Nog (ENSMOCG00000003140)	ENSMOCG00000005282	Ankfn1 (ENSMOCG00000002064)	Pctp (ENSMOCG00000021810)	Tmem100 (ENSMOCG00000021604)	Mmd (ENSMOCG00000011224)	Hlf (ENSMOCG00000002111)	Stxbp4 (ENSMOCG00000014715)	ENSMOCG00000006989	Tom1l1 (ENSMOCG00000004415)	Kif2b (ENSMOCG00000002849)	ENSMOCG00000017678	Car10 (ENSMOCG00000011451)	ENSMOCG00000002721	Utp18 (ENSMOCG00000010919)	Mbtd1 (ENSMOCG00000021328) ##22	ENSMOCG00000013162	Spag9 (ENSMOCG00000020874)	Tob1 (ENSMOCG00000011383)	Wfikkn2 (ENSMOCG00000003939)	Luc7l3 (ENSMOCG00000013538)	Ankrd40 (ENSMOCG00000004664)	ENSMOCG00000011138	ENSMOCG00000013091	Cacna1g (ENSMOCG00000006187)	Spata20 (ENSMOCG00000005071)	Epn3 (ENSMOCG00000015958)	Mycbpap (ENSMOCG00000019504)	Rsad1 (ENSMOCG00000021925)	Acsf2 (ENSMOCG00000009899)	Chad (ENSMOCG00000003529) ##23
Murinae	ANCESTRAL SPECIES	6	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Mus	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.q	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.c	ENSGT00940000163317	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k.e	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.q	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.c	ENSGT00940000163317	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k.e	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Mouse	MODERN SPECIES	2	Dgke (ENSMUSG00000000276)	Gm525 (ENSMUSG00000072553)	Nog (ENSMUSG00000048616)	Ankfn1 (ENSMUSG00000047773)	Pctp (ENSMUSG00000020553)	Tmem100 (ENSMUSG00000069763)	Smim36 (ENSMUSG00000110344)	Mmd (ENSMUSG00000003948)	Hlf (ENSMUSG00000003949)	Stxbp4 (ENSMUSG00000020546)	Cox11 (ENSMUSG00000020544)	Tom1l1 (ENSMUSG00000020541)	Kif2b (ENSMUSG00000046755)	Car10 (ENSMUSG00000056158)	Utp18 (ENSMUSG00000054079)	Mbtd1 (ENSMUSG00000059474) ##22	Nme2 (ENSMUSG00000020857)	Gm20390 (ENSMUSG00000091228)	Nme1 (ENSMUSG00000037601)	Spag9 (ENSMUSG00000020859)	Tob1 (ENSMUSG00000037573)	Wfikkn2 (ENSMUSG00000044177)	Ankrd40cl (ENSMUSG00000094091)	Luc7l3 (ENSMUSG00000020863)	Ankrd40 (ENSMUSG00000020864)	Abcc3 (ENSMUSG00000020865)	Cacna1g (ENSMUSG00000020866)	Spata20 (ENSMUSG00000020867)	Epn3 (ENSMUSG00000010080)	Mycbpap (ENSMUSG00000039110)	Rsad1 (ENSMUSG00000039096)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.q	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.c	ENSGT00940000163317	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k.e	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
spretus	MODERN SPECIES	2	Dgke (MGP_SPRETEiJ_G0017800)	Gm525 (MGP_SPRETEiJ_G0017801)	Nog (MGP_SPRETEiJ_G0017802)	MGP_SPRETEiJ_G0017803	MGP_SPRETEiJ_G0017804	Pctp (MGP_SPRETEiJ_G0017805)	Tmem100 (MGP_SPRETEiJ_G0017806)	Mmd (MGP_SPRETEiJ_G0017807)	Hlf (MGP_SPRETEiJ_G0017808)	Stxbp4 (MGP_SPRETEiJ_G0017809)	Cox11 (MGP_SPRETEiJ_G0017810)	Tom1l1 (MGP_SPRETEiJ_G0017811)	Kif2b (MGP_SPRETEiJ_G0017812)	Car10 (MGP_SPRETEiJ_G0017813)	Utp18 (MGP_SPRETEiJ_G0017814)	MGP_SPRETEiJ_G0017815 ##22	Nme2 (MGP_SPRETEiJ_G0017816)	MGP_SPRETEiJ_G0017817	Nme1 (MGP_SPRETEiJ_G0017818)	Spag9 (MGP_SPRETEiJ_G0017819)	Tob1 (MGP_SPRETEiJ_G0017820)	Wfikkn2 (MGP_SPRETEiJ_G0017821)	Ankrd40cl (MGP_SPRETEiJ_G0017822)	Luc7l3 (MGP_SPRETEiJ_G0017823)	Ankrd40 (MGP_SPRETEiJ_G0017824)	Abcc3 (MGP_SPRETEiJ_G0017825)	Cacna1g (MGP_SPRETEiJ_G0017826)	Spata20 (MGP_SPRETEiJ_G0017827)	Epn3 (MGP_SPRETEiJ_G0017828)	Mycbpap (MGP_SPRETEiJ_G0017829)	Rsad1 (MGP_SPRETEiJ_G0017830)
Steppe mouse	MODERN SPECIES	3074														Car10 (ENSMSIG00000006012)	Utp18 (ENSMSIG00000006126)	Mbtd1 (ENSMSIG00000006207) ##22	ENSMSIG00000006602	Spag9 (ENSMSIG00000006671)	Tob1 (ENSMSIG00000007131)	Wfikkn2 (ENSMSIG00000007145)	Ankrd40cl (ENSMSIG00000007162)	Luc7l3 (ENSMSIG00000007180)	Ankrd40 (ENSMSIG00000007263)	Abcc3 (ENSMSIG00000007369)	Cacna1g (ENSMSIG00000007636)	Spata20 (ENSMSIG00000014363)	Epn3 (ENSMSIG00000014391)	Mycbpap (ENSMSIG00000014428)	Rsad1 (ENSMSIG00000014491)	Acsf2 (ENSMSIG00000014533)	Chad (ENSMSIG00000014562) ##23
Ryukyu mouse	MODERN SPECIES	2	Dgke (MGP_CAROLIEiJ_G0016954)	Gm525 (MGP_CAROLIEiJ_G0016955)	Nog (MGP_CAROLIEiJ_G0016956)	MGP_CAROLIEiJ_G0016957	MGP_CAROLIEiJ_G0016958	Pctp (MGP_CAROLIEiJ_G0016959)	Tmem100 (MGP_CAROLIEiJ_G0016960)	Mmd (MGP_CAROLIEiJ_G0016961)	Hlf (MGP_CAROLIEiJ_G0016962)	Stxbp4 (MGP_CAROLIEiJ_G0016963)	Cox11 (MGP_CAROLIEiJ_G0016964)	Tom1l1 (MGP_CAROLIEiJ_G0016965)	Kif2b (MGP_CAROLIEiJ_G0016966)	Car10 (MGP_CAROLIEiJ_G0016967)	Utp18 (MGP_CAROLIEiJ_G0016968)	Mbtd1 (MGP_CAROLIEiJ_G0016969) ##22	Nme2 (MGP_CAROLIEiJ_G0016970)	MGP_CAROLIEiJ_G0016971	Nme1 (MGP_CAROLIEiJ_G0016972)	Spag9 (MGP_CAROLIEiJ_G0016973)	Tob1 (MGP_CAROLIEiJ_G0016974)	Wfikkn2 (MGP_CAROLIEiJ_G0016975)	MGP_CAROLIEiJ_G0016976	Luc7l3 (MGP_CAROLIEiJ_G0016977)	Ankrd40 (MGP_CAROLIEiJ_G0016978)	Abcc3 (MGP_CAROLIEiJ_G0016979)	Cacna1g (MGP_CAROLIEiJ_G0016980)	Spata20 (MGP_CAROLIEiJ_G0016981)	Epn3 (MGP_CAROLIEiJ_G0016982)	Mycbpap (MGP_CAROLIEiJ_G0016983)	Rsad1 (MGP_CAROLIEiJ_G0016984)
Shrew mouse	MODERN SPECIES	5	Dgke (MGP_PahariEiJ_G0018085)	Gm525 (MGP_PahariEiJ_G0018086)	Nog (MGP_PahariEiJ_G0018087)	MGP_PahariEiJ_G0018088	MGP_PahariEiJ_G0018089	Pctp (MGP_PahariEiJ_G0018090)	Tmem100 (MGP_PahariEiJ_G0018091)	Mmd (MGP_PahariEiJ_G0018092)	Hlf (MGP_PahariEiJ_G0018093)	Stxbp4 (MGP_PahariEiJ_G0018094)	Cox11 (MGP_PahariEiJ_G0018095)	Tom1l1 (MGP_PahariEiJ_G0018096)	Kif2b (MGP_PahariEiJ_G0018097)	Car10 (MGP_PahariEiJ_G0018098)	Utp18 (MGP_PahariEiJ_G0018099)	Mbtd1 (MGP_PahariEiJ_G0018100) ##22	Nme2 (MGP_PahariEiJ_G0018101)	MGP_PahariEiJ_G0018102	MGP_PahariEiJ_G0018103	Spag9 (MGP_PahariEiJ_G0018104)	Tob1 (MGP_PahariEiJ_G0018105)	Wfikkn2 (MGP_PahariEiJ_G0018106)	MGP_PahariEiJ_G0018107	Luc7l3 (MGP_PahariEiJ_G0018108)	Ankrd40 (MGP_PahariEiJ_G0018109)	Abcc3 (MGP_PahariEiJ_G0018110)	Cacna1g (MGP_PahariEiJ_G0018111)	Spata20 (MGP_PahariEiJ_G0018112)	Epn3 (MGP_PahariEiJ_G0018113)	Mycbpap (MGP_PahariEiJ_G0018114)	Rsad1 (MGP_PahariEiJ_G0018115)
Rat	MODERN SPECIES	1	Ankfn1 (ENSRNOG00000064511)	Pctp (ENSRNOG00000002425)	Tmem100 (ENSRNOG00000002434)	Smim36 (ENSRNOG00000069860)	Mmd (ENSRNOG00000002436)	Hlf (ENSRNOG00000067479)	Stxbp4 (ENSRNOG00000032768)	Cox11 (ENSRNOG00000052096)	Tom1l1 (ENSRNOG00000002474)	AABR07013200.1 (ENSRNOG00000030491)	LOC100363469 (ENSRNOG00000031579)	Car10 (ENSRNOG00000002626)	LOC100911361 (ENSRNOG00000027006)	Tmsb10-ps6 (ENSRNOG00000036921)	Utp18 (ENSRNOG00000002644)	Mbtd1 (ENSRNOG00000049988) ##22	Nme2 (ENSRNOG00000002671)	Nme1 (ENSRNOG00000002693)	Spag9 (ENSRNOG00000002749)	Tob1 (ENSRNOG00000002828)	Wfikkn2 (ENSRNOG00000002831)	Ankrd40cl (ENSRNOG00000045669)	Luc7l3 (ENSRNOG00000002835)	Ankrd40 (ENSRNOG00000002935)	Abcc3 (ENSRNOG00000002948)	Cacna1g (ENSRNOG00000060528)	Spata20 (ENSRNOG00000003273)	Epn3 (ENSRNOG00000003284)	Mycbpap (ENSRNOG00000042912)	Rsad1 (ENSRNOG00000065974)	Acsf2 (ENSRNOG00000003330)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1028		Gm525 (ENSNGAG00000023579)	Nog (ENSNGAG00000008406)	ENSNGAG00000022323	Ankfn1 (ENSNGAG00000020087)	Pctp (ENSNGAG00000017939)	Tmem100 (ENSNGAG00000017499)	Mmd (ENSNGAG00000014107)	Hlf (ENSNGAG00000024380)	Stxbp4 (ENSNGAG00000022606)	ENSNGAG00000022170	Tom1l1 (ENSNGAG00000022011)	ENSNGAG00000017840	Car10 (ENSNGAG00000022109)	Utp18 (ENSNGAG00000014193)	Mbtd1 (ENSNGAG00000023882) ##22	ENSNGAG00000021569	Spag9 (ENSNGAG00000002339)	Tob1 (ENSNGAG00000022218)	Wfikkn2 (ENSNGAG00000022027)	Luc7l3 (ENSNGAG00000007648)	Ankrd40 (ENSNGAG00000001113)	Abcc3 (ENSNGAG00000019992)	Cacna1g (ENSNGAG00000022404)	Spata20 (ENSNGAG00000004968)	Epn3 (ENSNGAG00000000845)	Mycbpap (ENSNGAG00000022343)	Rsad1 (ENSNGAG00000021237)	Chad (ENSNGAG00000020178) ##23	Acsf2 (ENSNGAG00000017923)	Lrrc59 (ENSNGAG00000015675)
Lesser Egyptian jerboa	MODERN SPECIES	56													ENSJJAG00000010710	Car10 (ENSJJAG00000011249)	Utp18 (ENSJJAG00000010814)	Mbtd1 (ENSJJAG00000009918) ##22	ENSJJAG00000010521	Spag9 (ENSJJAG00000010376)	Tob1 (ENSJJAG00000006413)	Wfikkn2 (ENSJJAG00000007705)	ENSJJAG00000011218	Ankrd40 (ENSJJAG00000005910)	Abcc3 (ENSJJAG00000011383)	Cacna1g (ENSJJAG00000010477)	Spata20 (ENSJJAG00000005689)	Epn3 (ENSJJAG00000010839)	Mycbpap (ENSJJAG00000010056)	Rsad1 (ENSJJAG00000010782)	Chad (ENSJJAG00000004104) ##23	Acsf2 (ENSJJAG00000010167)	Lrrc59 (ENSJJAG00000009353)
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
Guinea pig	MODERN SPECIES	53	DGKE (ENSCPOG00000011459)	C17orf67 (ENSCPOG00000022723)	NOG (ENSCPOG00000004932)	ANKFN1 (ENSCPOG00000004925)	PCTP (ENSCPOG00000013507)	TMEM100 (ENSCPOG00000040096)	SMIM36 (ENSCPOG00000032031)	MMD (ENSCPOG00000039747)	HLF (ENSCPOG00000032087)	STXBP4 (ENSCPOG00000011602)	COX11 (ENSCPOG00000008482)	TOM1L1 (ENSCPOG00000023145)	KIF2B (ENSCPOG00000026487)	CA10 (ENSCPOG00000015491)	UTP18 (ENSCPOG00000001477)	MBTD1 (ENSCPOG00000002995) ##22	NME2 (ENSCPOG00000008413)	NME1 (ENSCPOG00000033542)	SPAG9 (ENSCPOG00000008508)	TOB1 (ENSCPOG00000037691)	WFIKKN2 (ENSCPOG00000034191)	LUC7L3 (ENSCPOG00000034356)	ANKRD40 (ENSCPOG00000033728)	ABCC3 (ENSCPOG00000013296)	CACNA1G (ENSCPOG00000025511)	SPATA20 (ENSCPOG00000024264)	EPN3 (ENSCPOG00000020362)	MYCBPAP (ENSCPOG00000013284)	RSAD1 (ENSCPOG00000034976)	ACSF2 (ENSCPOG00000013278)	CHAD (ENSCPOG00000032331) ##23
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
Long-tailed chinchilla	MODERN SPECIES	158	DGKE (ENSCLAG00000012917)	C17orf67 (ENSCLAG00000015852)	NOG (ENSCLAG00000017798)	ENSCLAG00000013710	ANKFN1 (ENSCLAG00000015690)	PCTP (ENSCLAG00000012326)	TMEM100 (ENSCLAG00000014942)	SMIM36 (ENSCLAG00000018044)	MMD (ENSCLAG00000016458)	HLF (ENSCLAG00000013244)	STXBP4 (ENSCLAG00000011711)	COX11 (ENSCLAG00000013909)	TOM1L1 (ENSCLAG00000012206)	CA10 (ENSCLAG00000014796)	UTP18 (ENSCLAG00000012603)	MBTD1 (ENSCLAG00000011590) ##22	NME2 (ENSCLAG00000013895)	SPAG9 (ENSCLAG00000015982)	TOB1 (ENSCLAG00000016229)	WFIKKN2 (ENSCLAG00000015014)	LUC7L3 (ENSCLAG00000013901)	ANKRD40 (ENSCLAG00000012550)	ABCC3 (ENSCLAG00000011690)	CACNA1G (ENSCLAG00000013164)	SPATA20 (ENSCLAG00000014759)	EPN3 (ENSCLAG00000013115)	MYCBPAP (ENSCLAG00000013227)	RSAD1 (ENSCLAG00000011905)	ACSF2 (ENSCLAG00000014340)	CHAD (ENSCLAG00000011933) ##23	LRRC59 (ENSCLAG00000012618)
Degu	MODERN SPECIES	97	ABCB4 (ENSODEG00000016780)	CROT (ENSODEG00000015960)	ENSODEG00000016222	ENSODEG00000016235	ENSODEG00000016003	ENSODEG00000015753	ELAPOR2 (ENSODEG00000016608)	GRM3 (ENSODEG00000016466)	ENSODEG00000016069	TOM1L1 (ENSODEG00000016753)	ENSODEG00000016239	ENSODEG00000016314	CA10 (ENSODEG00000016234)	ENSODEG00000016197	UTP18 (ENSODEG00000016286)	MBTD1 (ENSODEG00000016087) ##22	ENSODEG00000016426	ENSODEG00000016910	ENSODEG00000016681	TOB1 (ENSODEG00000020335)	WFIKKN2 (ENSODEG00000016641)	ENSODEG00000016974	ANKRD40 (ENSODEG00000016447)	ABCC3 (ENSODEG00000016316)	CACNA1G (ENSODEG00000017736)	SPATA20 (ENSODEG00000016520)	EPN3 (ENSODEG00000016963)	MYCBPAP (ENSODEG00000017339)	ENSODEG00000016573	ACSF2 (ENSODEG00000016960)	CHAD (ENSODEG00000016909) ##23
Naked mole-rat female	MODERN SPECIES	12	TMEM100 (ENSHGLG00000049459)	SMIM36 (ENSHGLG00000047421)	MMD (ENSHGLG00000011695)	HLF (ENSHGLG00000031895)	ENSHGLG00000039115	STXBP4 (ENSHGLG00000012455)	COX11 (ENSHGLG00000012128)	TOM1L1 (ENSHGLG00000016187)	ENSHGLG00000039703	ENSHGLG00000020791	ENSHGLG00000020500	CA10 (ENSHGLG00000012469)	ENSHGLG00000020129	ENSHGLG00000049611	UTP18 (ENSHGLG00000013645)	MBTD1 (ENSHGLG00000012910) ##22	NME2 (ENSHGLG00000049278)	ENSHGLG00000046537	SPAG9 (ENSHGLG00000010556)	ENSHGLG00000033861	TOB1 (ENSHGLG00000035274)	WFIKKN2 (ENSHGLG00000012317)	LUC7L3 (ENSHGLG00000010417)	ANKRD40 (ENSHGLG00000041927)	ABCC3 (ENSHGLG00000011309)	ENSHGLG00000045504	CACNA1G (ENSHGLG00000019354)	SPATA20 (ENSHGLG00000019135)	ENSHGLG00000018546	MYCBPAP (ENSHGLG00000013477)	RSAD1 (ENSHGLG00000013055)
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Marmotini	ANCESTRAL SPECIES	8	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Marmotini_b	ANCESTRAL SPECIES	5	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Arctic ground squirrel	MODERN SPECIES	46														CA10 (ENSUPAG00010023439)	UTP18 (ENSUPAG00010023440)	MBTD1 (ENSUPAG00010000047) ##22	ENSUPAG00010000361	NME1 (ENSUPAG00010000388)	SPAG9 (ENSUPAG00010000406)	TOB1 (ENSUPAG00010001550)	WFIKKN2 (ENSUPAG00010001564)	ANKRD40CL (ENSUPAG00010001580)	LUC7L3 (ENSUPAG00010001604)	ANKRD40 (ENSUPAG00010001754)	ABCC3 (ENSUPAG00010001779)	CACNA1G (ENSUPAG00010001920)	SPATA20 (ENSUPAG00010005223)	EPN3 (ENSUPAG00010005252)	MYCBPAP (ENSUPAG00010005269)	RSAD1 (ENSUPAG00010005559)	ACSF2 (ENSUPAG00010005567)
Squirrel	MODERN SPECIES	90	TRIM25 (ENSSTOG00000009323)	C17orf67 (ENSSTOG00000025271)	NOG (ENSSTOG00000024922)	ENSSTOG00000019503	ANKFN1 (ENSSTOG00000010280)	PCTP (ENSSTOG00000008053)	TMEM100 (ENSSTOG00000012336)	SMIM36 (ENSSTOG00000032016)	MMD (ENSSTOG00000016227)	HLF (ENSSTOG00000029018)	STXBP4 (ENSSTOG00000012175)	ENSSTOG00000012160	KIF2B (ENSSTOG00000011516)	CA10 (ENSSTOG00000016378)	UTP18 (ENSSTOG00000004212)	MBTD1 (ENSSTOG00000001234) ##22	NME2 (ENSSTOG00000001230)	NME1 (ENSSTOG00000032316)	SPAG9 (ENSSTOG00000005080)	TOB1 (ENSSTOG00000006911)	WFIKKN2 (ENSSTOG00000021096)	LUC7L3 (ENSSTOG00000004234)	ANKRD40 (ENSSTOG00000004215)	ABCC3 (ENSSTOG00000027974)	CACNA1G (ENSSTOG00000019651)	SPATA20 (ENSSTOG00000004098)	EPN3 (ENSSTOG00000023552)	MYCBPAP (ENSSTOG00000011746)	RSAD1 (ENSSTOG00000011733)	ACSF2 (ENSSTOG00000011724)	CHAD (ENSSTOG00000011729) ##23
Alpin marmot	MODERN SPECIES	42	ANKFN1 (ENSMMMG00000020855)	PCTP (ENSMMMG00000020875)	TMEM100 (ENSMMMG00000020880)	SMIM36 (ENSMMMG00000020885)	MMD (ENSMMMG00000020888)	ENSMMMG00000020910	ENSMMMG00000020913	HLF (ENSMMMG00000020915)	STXBP4 (ENSMMMG00000020922)	COX11 (ENSMMMG00000020936)	TOM1L1 (ENSMMMG00000020950)	KIF2B (ENSMMMG00000021059)	CA10 (ENSMMMG00000021089)	ENSMMMG00000021160	UTP18 (ENSMMMG00000021174)	MBTD1 (ENSMMMG00000021186) ##22	NME2 (ENSMMMG00000021220)	NME1 (ENSMMMG00000021223)	SPAG9 (ENSMMMG00000021229)	TOB1 (ENSMMMG00000021398)	WFIKKN2 (ENSMMMG00000021399)	ANKRD40CL (ENSMMMG00000021403)	LUC7L3 (ENSMMMG00000021408)	ANKRD40 (ENSMMMG00000021411)	ABCC3 (ENSMMMG00000021416)	ENSMMMG00000021449	CACNA1G (ENSMMMG00000021463)	SPATA20 (ENSMMMG00000022312)	EPN3 (ENSMMMG00000022352)	MYCBPAP (ENSMMMG00000022372)	RSAD1 (ENSMMMG00000022425)
Eurasian red squirrel	MODERN SPECIES	12	ANKFN1 (ENSSVLG00005008633)	PCTP (ENSSVLG00005008497)	TMEM100 (ENSSVLG00005008462)	SMIM36 (ENSSVLG00005008407)	MMD (ENSSVLG00005008382)	ENSSVLG00005008375	HLF (ENSSVLG00005008325)	STXBP4 (ENSSVLG00005008281)	COX11 (ENSSVLG00005008220)	TOM1L1 (ENSSVLG00005008148)	ENSSVLG00005008126	KIF2B (ENSSVLG00005008107)	CA10 (ENSSVLG00005008014)	ENSSVLG00005007983	UTP18 (ENSSVLG00005007967)	MBTD1 (ENSSVLG00005007896) ##22	NME2 (ENSSVLG00005007836)	NME1 (ENSSVLG00005007782)	SPAG9 (ENSSVLG00005007544)	TOB1 (ENSSVLG00005007463)	WFIKKN2 (ENSSVLG00005007430)	ANKRD40CL (ENSSVLG00005007394)	LUC7L3 (ENSSVLG00005007353)	ANKRD40 (ENSSVLG00005007335)	ABCC3 (ENSSVLG00005007311)	CACNA1G (ENSSVLG00005002928)	SPATA20 (ENSSVLG00005001260)	EPN3 (ENSSVLG00005001192)	MYCBPAP (ENSSVLG00005001150)	RSAD1 (ENSSVLG00005001112)	CHAD (ENSSVLG00005001097) ##23
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23	ENSGT00940000156830
Rabbit	MODERN SPECIES	10	ANKFN1 (ENSOCUG00000001342)	ENSOCUG00000030404	PCTP (ENSOCUG00000008956)	TMEM100 (ENSOCUG00000026610)	SMIM36 (ENSOCUG00000032098)	MMD (ENSOCUG00000010549)	HLF (ENSOCUG00000010547)	STXBP4 (ENSOCUG00000008478)	COX11 (ENSOCUG00000008473)	ENSOCUG00000008462	ENSOCUG00000033244	KIF2B (ENSOCUG00000010703)	CA10 (ENSOCUG00000002345)	ENSOCUG00000003298	UTP18 (ENSOCUG00000001636)	MBTD1 (ENSOCUG00000021379) ##22	ENSOCUG00000024946	NME1 (ENSOCUG00000022135)	SPAG9 (ENSOCUG00000000817)	TOB1 (ENSOCUG00000002771)	WFIKKN2 (ENSOCUG00000000391)	LUC7L3 (ENSOCUG00000002765)	ANKRD40 (ENSOCUG00000024074)	ABCC3 (ENSOCUG00000002754)	CACNA1G (ENSOCUG00000002733)	SPATA20 (ENSOCUG00000002725)	EPN3 (ENSOCUG00000002719)	MYCBPAP (ENSOCUG00000002706)	ENSOCUG00000036140	RSAD1 (ENSOCUG00000002702)	ACSF2 (ENSOCUG00000002690)
Pika	MODERN SPECIES	143																MBTD1 (ENSOPRG00000013652) ##22	ENSOPRG00000013625	SPAG9 (ENSOPRG00000013577)	TOB1 (ENSOPRG00000013571)	WFIKKN2 (ENSOPRG00000013566)	LUC7L3 (ENSOPRG00000013537)	ANKRD40 (ENSOPRG00000013514)	ABCC3 (ENSOPRG00000013477)	CACNA1G (ENSOPRG00000013419)	SPATA20 (ENSOPRG00000013392)	EPN3 (ENSOPRG00000013374)	MYCBPAP (ENSOPRG00000013326)	RSAD1 (ENSOPRG00000013309)	CHAD (ENSOPRG00000013295) ##23	ACSF2 (ENSOPRG00000013276)	LRRC59 (ENSOPRG00000013264)
Primates	ANCESTRAL SPECIES	3	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00390000010170.a.b.c.b	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216
Macaca	ANCESTRAL SPECIES	4	ENSGT00940000161852.p	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00390000010170.a.b.c.b	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT01100000263577.a.a.b.a.b.a.a.b.b.a.b	ENSGT01100000263493.a.b.a.a.a.b.a.b.b.a.a.a.a.b	ENSGT00940000157428	ENSGT00940000156555	ENSGT01100000263493.a.b.a.a.a.a.a.a.b.a.a.a	ENSGT00390000002226	ENSGT00390000007512	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000010799.u.b.a.a.b.o.a
Rhesus	MODERN SPECIES	7	ENSMMUG00000050544	ENSMMUG00000056602	STXBP4 (ENSMMUG00000010546)	COX11 (ENSMMUG00000010548)	TOM1L1 (ENSMMUG00000010550)	ENSMMUG00000061057	ENSMMUG00000057025	KIF2B (ENSMMUG00000014427)	ENSMMUG00000060858	ENSMMUG00000063189	CA10 (ENSMMUG00000013737)	ENSMMUG00000059340	ENSMMUG00000064982	ENSMMUG00000051004	UTP18 (ENSMMUG00000007858)	MBTD1 (ENSMMUG00000001942) ##22	NME1 (ENSMMUG00000001940)	SPAG9 (ENSMMUG00000022528)	ENSMMUG00000054539	TOB1 (ENSMMUG00000022740)	WFIKKN2 (ENSMMUG00000022741)	ANKRD40CL (ENSMMUG00000057364)	LUC7L3 (ENSMMUG00000010117)	ENSMMUG00000064138	ANKRD40 (ENSMMUG00000003421)	ABCC3 (ENSMMUG00000003414)	CACNA1G (ENSMMUG00000017256)	SPATA20 (ENSMMUG00000017252)	EPN3 (ENSMMUG00000017249)	MYCBPAP (ENSMMUG00000017242)	RSAD1 (ENSMMUG00000017240)
Crab-eating macaque	MODERN SPECIES	7	ENSMFAG00000052938	ENSMFAG00000057419	MMD (ENSMFAG00000000970)	HLF (ENSMFAG00000032996)	ENSMFAG00000049221	STXBP4 (ENSMFAG00000001400)	COX11 (ENSMFAG00000003883)	TOM1L1 (ENSMFAG00000044267)	ENSMFAG00000065816	ENSMFAG00000055191	ENSMFAG00000019657	ENSMFAG00000065631	ENSMFAG00000057511	CA10 (ENSMFAG00000021148)	UTP18 (ENSMFAG00000034325)	MBTD1 (ENSMFAG00000042808) ##22	NME2 (ENSMFAG00000007607)	NME1 (ENSMFAG00000058207)	SPAG9 (ENSMFAG00000035882)	ENSMFAG00000052208	ENSMFAG00000055535	TOB1 (ENSMFAG00000025713)	WFIKKN2 (ENSMFAG00000041670)	ANKRD40CL (ENSMFAG00000049218)	LUC7L3 (ENSMFAG00000031780)	ANKRD40 (ENSMFAG00000003914)	ABCC3 (ENSMFAG00000040341)	ENSMFAG00000065101	ENSMFAG00000055574	EPN3 (ENSMFAG00000044525)	MYCBPAP (ENSMFAG00000045294)
Pig-tailed macaque	MODERN SPECIES	494														CA10 (ENSMNEG00000038854)	UTP18 (ENSMNEG00000032235)	MBTD1 (ENSMNEG00000037727) ##22	ENSMNEG00000040888	SPAG9 (ENSMNEG00000035827)	TOB1 (ENSMNEG00000017321)	WFIKKN2 (ENSMNEG00000039251)	LUC7L3 (ENSMNEG00000005520)	ANKRD40 (ENSMNEG00000029546)	ABCC3 (ENSMNEG00000032187)	CACNA1G (ENSMNEG00000039189)	SPATA20 (ENSMNEG00000037398)	EPN3 (ENSMNEG00000033160)	MYCBPAP (ENSMNEG00000032690)	ENSMNEG00000030665	RSAD1 (ENSMNEG00000031537)	CHAD (ENSMNEG00000042174) ##23	ACSF2 (ENSMNEG00000042990)
Cercopithecinae_b	ANCESTRAL SPECIES	20	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00390000010170.a.b.c.b	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216
Cercopithecinae_d	ANCESTRAL SPECIES	7	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00390000010170.a.b.c.b	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.h	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216
Drill	MODERN SPECIES	1297														CA10 (ENSMLEG00000038750)	UTP18 (ENSMLEG00000041162)	MBTD1 (ENSMLEG00000040217) ##22	ENSMLEG00000017846	SPAG9 (ENSMLEG00000034843)	TOB1 (ENSMLEG00000021632)	WFIKKN2 (ENSMLEG00000031130)	LUC7L3 (ENSMLEG00000034172)	ANKRD40 (ENSMLEG00000012072)	ABCC3 (ENSMLEG00000030466)	CACNA1G (ENSMLEG00000032994)	SPATA20 (ENSMLEG00000041900)	EPN3 (ENSMLEG00000042354)	MYCBPAP (ENSMLEG00000026302)	ENSMLEG00000031115	RSAD1 (ENSMLEG00000037409)	ACSF2 (ENSMLEG00000001658)	CHAD (ENSMLEG00000034621) ##23
Sooty mangabey	MODERN SPECIES	617	C17orf67 (ENSCATG00000042858)	NOG (ENSCATG00000002205)	ANKFN1 (ENSCATG00000032190)	PCTP (ENSCATG00000035527)	TMEM100 (ENSCATG00000009385)	SMIM36 (ENSCATG00000007986)	MMD (ENSCATG00000039146)	HLF (ENSCATG00000040926)	STXBP4 (ENSCATG00000009577)	COX11 (ENSCATG00000040653)	TOM1L1 (ENSCATG00000043005)	ENSCATG00000036002	ENSCATG00000039281	CA10 (ENSCATG00000039920)	UTP18 (ENSCATG00000007697)	MBTD1 (ENSCATG00000012557) ##22	NME2 (ENSCATG00000041058)	ENSCATG00000033652	SPAG9 (ENSCATG00000029267)	TOB1 (ENSCATG00000022467)	WFIKKN2 (ENSCATG00000036084)	ANKRD40CL (ENSCATG00000035360)
Olive baboon	MODERN SPECIES	8	NOG (ENSPANG00000003449)	ANKFN1 (ENSPANG00000022322)	PCTP (ENSPANG00000022356)	TMEM100 (ENSPANG00000022363)	SMIM36 (ENSPANG00000030203)	MMD (ENSPANG00000022362)	HLF (ENSPANG00000022360)	STXBP4 (ENSPANG00000022358)	COX11 (ENSPANG00000022373)	TOM1L1 (ENSPANG00000022382)	KIF2B (ENSPANG00000040957)	ENSPANG00000051137	ENSPANG00000043896	CA10 (ENSPANG00000022378)	UTP18 (ENSPANG00000022441)	MBTD1 (ENSPANG00000022443) ##22	NME2 (ENSPANG00000038462)	ENSPANG00000022445	SPAG9 (ENSPANG00000022449)	TOB1 (ENSPANG00000022448)	WFIKKN2 (ENSPANG00000032724)	ANKRD40CL (ENSPANG00000045938)	LUC7L3 (ENSPANG00000022461)	ANKRD40 (ENSPANG00000022460)	ABCC3 (ENSPANG00000022459)	CACNA1G (ENSPANG00000022468)	SPATA20 (ENSPANG00000022479)	EPN3 (ENSPANG00000022477)	MYCBPAP (ENSPANG00000022476)	ENSPANG00000050914	RSAD1 (ENSPANG00000022474)
Vervet Monkey	MODERN SPECIES	7	ANKFN1 (ENSCSAG00000005580)	PCTP (ENSCSAG00000005567)	TMEM100 (ENSCSAG00000000547)	ENSCSAG00000000546	MMD (ENSCSAG00000005559)	HLF (ENSCSAG00000005557)	STXBP4 (ENSCSAG00000005550)	COX11 (ENSCSAG00000005536)	TOM1L1 (ENSCSAG00000005531)	KIF2B (ENSCSAG00000000545)	ENSCSAG00000000544	ENSCSAG00000005527	CDC42SE1 (ENSCSAG00000000543)	CA10 (ENSCSAG00000005524)	UTP18 (ENSCSAG00000005521)	MBTD1 (ENSCSAG00000005517) ##22	NME2 (ENSCSAG00000005514)	NME1 (ENSCSAG00000005510)	SPAG9 (ENSCSAG00000005508)	TOB1 (ENSCSAG00000000542)	WFIKKN2 (ENSCSAG00000005505)	ANKRD40CL (ENSCSAG00000005488)	LUC7L3 (ENSCSAG00000005485)	ANKRD40 (ENSCSAG00000005484)	ABCC3 (ENSCSAG00000005481)	CACNA1G (ENSCSAG00000005469)	SPATA20 (ENSCSAG00000005452)	EPN3 (ENSCSAG00000005448)	MYCBPAP (ENSCSAG00000005444)	RSAD1 (ENSCSAG00000005429)	ACSF2 (ENSCSAG00000005420)
Rhinopithecus	ANCESTRAL SPECIES	19															ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000163317.a	ENSGT00940000153496.a.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00940000164975	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23	ENSGT00390000017385
Golden snub-nosed monkey	MODERN SPECIES	2563															UTP18 (ENSRROG00000040668)	MBTD1 (ENSRROG00000039412) ##22	ENSRROG00000010557	SPAG9 (ENSRROG00000037678)	WFIKKN2 (ENSRROG00000038868)	LUC7L3 (ENSRROG00000039925)	ANKRD40 (ENSRROG00000029337)	ABCC3 (ENSRROG00000040108)	CACNA1G (ENSRROG00000043013)	SPATA20 (ENSRROG00000042258)	EPN3 (ENSRROG00000042841)	MYCBPAP (ENSRROG00000034291)	ENSRROG00000041002	RSAD1 (ENSRROG00000028670)	CHAD (ENSRROG00000038428) ##23	ACSF2 (ENSRROG00000037852)	LRRC59 (ENSRROG00000031009)
Black snub-nosed monkey	MODERN SPECIES	1661																MBTD1 (ENSRBIG00000031922) ##22	ENSRBIG00000044790	SPAG9 (ENSRBIG00000044908)	WFIKKN2 (ENSRBIG00000038637)	LUC7L3 (ENSRBIG00000032055)	ANKRD40 (ENSRBIG00000030459)	ABCC3 (ENSRBIG00000036905)	CACNA1G (ENSRBIG00000044812)	SPATA20 (ENSRBIG00000041592)	EPN3 (ENSRBIG00000038001)	MYCBPAP (ENSRBIG00000029890)	ENSRBIG00000042395	RSAD1 (ENSRBIG00000044435)	ACSF2 (ENSRBIG00000039108)	CHAD (ENSRBIG00000044280) ##23	LRRC59 (ENSRBIG00000033634)
Hominoidea	ANCESTRAL SPECIES	13	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.w	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.o	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Hominidae	ANCESTRAL SPECIES	16	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.w	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.o	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.w	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.o	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Gorilla	MODERN SPECIES	18	ENSGGOG00000001806	ANKFN1 (ENSGGOG00000005100)	PCTP (ENSGGOG00000022146)	ENSGGOG00000036422	ENSGGOG00000042407	MMD (ENSGGOG00000012014)	HLF (ENSGGOG00000006075)	STXBP4 (ENSGGOG00000012026)	COX11 (ENSGGOG00000011627)	TOM1L1 (ENSGGOG00000017131)	ENSGGOG00000042591	ENSGGOG00000036299	KIF2B (ENSGGOG00000006928)	CA10 (ENSGGOG00000015456)	UTP18 (ENSGGOG00000017061)	MBTD1 (ENSGGOG00000003708) ##22	NME1 (ENSGGOG00000016526)	SPAG9 (ENSGGOG00000015297)	TOB1 (ENSGGOG00000008005)	WFIKKN2 (ENSGGOG00000022330)	LUC7L3 (ENSGGOG00000024399)	ANKRD40 (ENSGGOG00000027851)	ABCC3 (ENSGGOG00000003404)	CACNA1G (ENSGGOG00000003386)	SPATA20 (ENSGGOG00000003379)	EPN3 (ENSGGOG00000003374)	MYCBPAP (ENSGGOG00000003367)	RSAD1 (ENSGGOG00000006524)	ACSF2 (ENSGGOG00000006513)	CHAD (ENSGGOG00000006518) ##23	LRRC59 (ENSGGOG00000006310)
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.w	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000161569.o	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Human	MODERN SPECIES	8	DGKE (ENSG00000153933)	C17orf67 (ENSG00000214226)	NOG (ENSG00000183691)	ANKFN1 (ENSG00000153930)	PCTP (ENSG00000141179)	TMEM100 (ENSG00000166292)	SMIM36 (ENSG00000261873)	MMD (ENSG00000108960)	HLF (ENSG00000108924)	STXBP4 (ENSG00000166263)	COX11 (ENSG00000166260)	TOM1L1 (ENSG00000141198)	KIF2B (ENSG00000141200)	CA10 (ENSG00000154975)	UTP18 (ENSG00000011260)	MBTD1 (ENSG00000011258) ##22	NME2 (ENSG00000243678)	NME1-NME2 (ENSG00000011052)	NME1 (ENSG00000239672)	SPAG9 (ENSG00000008294)	TOB1 (ENSG00000141232)	WFIKKN2 (ENSG00000173714)	ANKRD40CL (ENSG00000167117)	LUC7L3 (ENSG00000108848)	ANKRD40 (ENSG00000154945)	ABCC3 (ENSG00000108846)	CACNA1G (ENSG00000006283)	SPATA20 (ENSG00000006282)	EPN3 (ENSG00000049283)	MYCBPAP (ENSG00000136449)	RSAD1 (ENSG00000136444)
Pan	ANCESTRAL SPECIES	3	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512.w	ENSGT01040000240929	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919.a	ENSGT00940000153840.a.a ##22	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23	ENSGT00940000156830	ENSGT00390000017385
Chimpanzee	MODERN SPECIES	8	C17H17orf67 (ENSPTRG00000033857)	NOG (ENSPTRG00000009430)	ANKFN1 (ENSPTRG00000009428)	PCTP (ENSPTRG00000009427)	TMEM100 (ENSPTRG00000046736)	SMIM36 (ENSPTRG00000044544)	MMD (ENSPTRG00000009425)	HLF (ENSPTRG00000009424)	STXBP4 (ENSPTRG00000009423)	COX11 (ENSPTRG00000009422)	ENSPTRG00000047490	TOM1L1 (ENSPTRG00000009421)	KIF2B (ENSPTRG00000009420)	CA10 (ENSPTRG00000009419)	ENSPTRG00000046547	MBTD1 (ENSPTRG00000009417) ##22	NME1 (ENSPTRG00000039502)	SPAG9 (ENSPTRG00000009414)	TOB1 (ENSPTRG00000009413)	WFIKKN2 (ENSPTRG00000045369)	LUC7L3 (ENSPTRG00000009409)	ANKRD40 (ENSPTRG00000009407)	ABCC3 (ENSPTRG00000009406)	CACNA1G (ENSPTRG00000009405)	SPATA20 (ENSPTRG00000009404)	EPN3 (ENSPTRG00000050099)	MYCBPAP (ENSPTRG00000009402)	RSAD1 (ENSPTRG00000009401)	CHAD (ENSPTRG00000009400) ##23	ACSF2 (ENSPTRG00000009399)	LRRC59 (ENSPTRG00000009398)
Bonobo	MODERN SPECIES	8	ENSPPAG00000043953	NOG (ENSPPAG00000008530)	ANKFN1 (ENSPPAG00000031705)	PCTP (ENSPPAG00000038977)	SMIM36 (ENSPPAG00000014151)	MMD (ENSPPAG00000041226)	HLF (ENSPPAG00000027309)	STXBP4 (ENSPPAG00000018824)	COX11 (ENSPPAG00000040863)	ENSPPAG00000037041	TOM1L1 (ENSPPAG00000034653)	KIF2B (ENSPPAG00000004801)	ENSPPAG00000028350	CA10 (ENSPPAG00000029545)	UTP18 (ENSPPAG00000033852)	MBTD1 (ENSPPAG00000027635) ##22	ENSPPAG00000034626	SPAG9 (ENSPPAG00000035613)	TOB1 (ENSPPAG00000012145)	WFIKKN2 (ENSPPAG00000028923)	LUC7L3 (ENSPPAG00000025115)	ANKRD40 (ENSPPAG00000034159)	ABCC3 (ENSPPAG00000037760)	CACNA1G (ENSPPAG00000027970)	SPATA20 (ENSPPAG00000031622)	EPN3 (ENSPPAG00000041326)	MYCBPAP (ENSPPAG00000020130)	RSAD1 (ENSPPAG00000038908)	CHAD (ENSPPAG00000042480) ##23	ACSF2 (ENSPPAG00000041679)	LRRC59 (ENSPPAG00000038146)
Orangutan	MODERN SPECIES	8	DGKE (ENSPPYG00000008250)	C17orf67 (ENSPPYG00000008251)	NOG (ENSPPYG00000008252)	ANKFN1 (ENSPPYG00000008253)	PCTP (ENSPPYG00000008254)	TMEM100 (ENSPPYG00000008255)	SMIM36 (ENSPPYG00000031288)	MMD (ENSPPYG00000008256)	HLF (ENSPPYG00000008257)	STXBP4 (ENSPPYG00000008258)	ENSPPYG00000037446	TOM1L1 (ENSPPYG00000025942)	KIF2B (ENSPPYG00000008261)	CA10 (ENSPPYG00000008263)	UTP18 (ENSPPYG00000008266)	MBTD1 (ENSPPYG00000036590) ##22	NME2 (ENSPPYG00000035680)	ENSPPYG00000008268	SPAG9 (ENSPPYG00000008269)	TOB1 (ENSPPYG00000008271)	WFIKKN2 (ENSPPYG00000008272)	ENSPPYG00000032401	LUC7L3 (ENSPPYG00000008273)	ANKRD40 (ENSPPYG00000008275)	ABCC3 (ENSPPYG00000008276)	CACNA1G (ENSPPYG00000008277)	SPATA20 (ENSPPYG00000008278)	EPN3 (ENSPPYG00000008279)	MYCBPAP (ENSPPYG00000008280)	RSAD1 (ENSPPYG00000008281)	ACSF2 (ENSPPYG00000008282)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	4	ENSNLEG00000008013	ENSNLEG00000008008	NOG (ENSNLEG00000028483)	ANKFN1 (ENSNLEG00000008001)	ENSNLEG00000007999	SMIM36 (ENSNLEG00000032208)	MMD (ENSNLEG00000007997)	HLF (ENSNLEG00000007993)	STXBP4 (ENSNLEG00000007992)	ENSNLEG00000030204	ENSNLEG00000007990	TOM1L1 (ENSNLEG00000007966)	CA10 (ENSNLEG00000007945)	ENSNLEG00000032835	UTP18 (ENSNLEG00000007941)	ENSNLEG00000007934 ##22	ENSNLEG00000031150	SPAG9 (ENSNLEG00000007894)	WFIKKN2 (ENSNLEG00000007890)	LUC7L3 (ENSNLEG00000007881)	ANKRD40 (ENSNLEG00000027193)	ENSNLEG00000007870	ENSNLEG00000027641	CACNA1G (ENSNLEG00000007757)	SPATA20 (ENSNLEG00000007743)	ENSNLEG00000007742	MYCBPAP (ENSNLEG00000007738)	ENSNLEG00000029848	ENSNLEG00000018247	ENSNLEG00000026991	LRRC59 (ENSNLEG00000027978)
Gibbon	MODERN SPECIES	40																ENSNLEG00000013197 ##22
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000160741	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919.b	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00390000007685.b	ENSGT00940000155223.b	ENSGT00440000033919.b	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Marmoset	MODERN SPECIES	17	PCTP (ENSCJAG00000011246)	TMEM100 (ENSCJAG00000043418)	SMIM36 (ENSCJAG00000074824)	ENSCJAG00000071374	MMD (ENSCJAG00000048045)	HLF (ENSCJAG00000061174)	STXBP4 (ENSCJAG00000011311)	ENSCJAG00000061117	COX11 (ENSCJAG00000011341)	TOM1L1 (ENSCJAG00000011347)	ENSCJAG00000059826	ENSCJAG00000082221	ENSCJAG00000070847	CA10 (ENSCJAG00000011392)	ENSCJAG00000018349	MBTD1 (ENSCJAG00000018369) ##22	NME2 (ENSCJAG00000067614)	NME1 (ENSCJAG00000018395)	SPAG9 (ENSCJAG00000018448)	ENSCJAG00000032609	TOB1 (ENSCJAG00000018533)	WFIKKN2 (ENSCJAG00000035232)	ANKRD40CL (ENSCJAG00000067605)	LUC7L3 (ENSCJAG00000018558)	ANKRD40 (ENSCJAG00000018627)	ABCC3 (ENSCJAG00000018609)	CACNA1G (ENSCJAG00000018639)	SPATA20 (ENSCJAG00000018727)	EPN3 (ENSCJAG00000018535)	MYCBPAP (ENSCJAG00000018762)	RSAD1 (ENSCJAG00000018782)
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000162984.c.b	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00390000007685.b	ENSGT00940000155223.b	ENSGT00440000033919.b	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23	ENSGT00390000011666.x.a
Bolivian squirrel monkey	MODERN SPECIES	86	DGKE (ENSSBOG00000034463)	C17orf67 (ENSSBOG00000032148)	NOG (ENSSBOG00000006250)	ENSSBOG00000023715	ANKFN1 (ENSSBOG00000028809)	PCTP (ENSSBOG00000033719)	TMEM100 (ENSSBOG00000018187)	ENSSBOG00000021163	HLF (ENSSBOG00000015535)	STXBP4 (ENSSBOG00000034723)	COX11 (ENSSBOG00000024452)	TOM1L1 (ENSSBOG00000009970)	ENSSBOG00000029628	CA10 (ENSSBOG00000026052)	ENSSBOG00000024404	MBTD1 (ENSSBOG00000008681) ##22	ENSSBOG00000031272	SPAG9 (ENSSBOG00000017078)	TOB1 (ENSSBOG00000025245)	WFIKKN2 (ENSSBOG00000032107)	LUC7L3 (ENSSBOG00000034373)	ANKRD40 (ENSSBOG00000029842)	ABCC3 (ENSSBOG00000034250)	CACNA1G (ENSSBOG00000035938)	SPATA20 (ENSSBOG00000021033)	EPN3 (ENSSBOG00000034210)	MYCBPAP (ENSSBOG00000023288)	RSAD1 (ENSSBOG00000021184)	CHAD (ENSSBOG00000027701) ##23	ACSF2 (ENSSBOG00000031032)	LRRC59 (ENSSBOG00000014866)
Capuchin	MODERN SPECIES	123														CA10 (ENSCCAG00000033937)	ENSCCAG00000020478	MBTD1 (ENSCCAG00000021832) ##22	NME2 (ENSCCAG00000013847)	ENSCCAG00000034597	SPAG9 (ENSCCAG00000014172)	WFIKKN2 (ENSCCAG00000027196)	LUC7L3 (ENSCCAG00000033579)	ANKRD40 (ENSCCAG00000026481)	ABCC3 (ENSCCAG00000030521)	CACNA1G (ENSCCAG00000033679)	SPATA20 (ENSCCAG00000035788)	EPN3 (ENSCCAG00000026446)	MYCBPAP (ENSCCAG00000037315)	RSAD1 (ENSCCAG00000029513)	CHAD (ENSCCAG00000038046) ##23	ENSCCAG00000036017	ACSF2 (ENSCCAG00000023167)
Mas night monkey	MODERN SPECIES	1105												ENSANAG00000027905	TOM1L1 (ENSANAG00000028626)	CA10 (ENSANAG00000027963)	ENSANAG00000030556	MBTD1 (ENSANAG00000024377) ##22	ENSANAG00000020987	SPAG9 (ENSANAG00000025617)	WFIKKN2 (ENSANAG00000022042)	LUC7L3 (ENSANAG00000030274)	ANKRD40 (ENSANAG00000037190)	ABCC3 (ENSANAG00000030499)	CACNA1G (ENSANAG00000035926)	SPATA20 (ENSANAG00000027831)	EPN3 (ENSANAG00000021539)	MYCBPAP (ENSANAG00000036578)	RSAD1 (ENSANAG00000020765)	CHAD (ENSANAG00000034092) ##23	ENSANAG00000034008	ACSF2 (ENSANAG00000032214)	LRRC59 (ENSANAG00000021578)
Tarsier	MODERN SPECIES	6831															UTP18 (ENSTSYG00000003057)	MBTD1 (ENSTSYG00000005977) ##22
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Mouse lemur	MODERN SPECIES	7	C17orf67 (ENSMICG00000047765)	NOG (ENSMICG00000003932)	ANKFN1 (ENSMICG00000003923)	PCTP (ENSMICG00000002870)	ENSMICG00000042462	MMD (ENSMICG00000034764)	HLF (ENSMICG00000046916)	ENSMICG00000033389	STXBP4 (ENSMICG00000005231)	ENSMICG00000005225	TOM1L1 (ENSMICG00000005217)	ENSMICG00000036993	ENSMICG00000030277	CA10 (ENSMICG00000043674)	UTP18 (ENSMICG00000009331)	MBTD1 (ENSMICG00000016291) ##22	ENSMICG00000046144	NME1 (ENSMICG00000007444)	SPAG9 (ENSMICG00000013743)	TOB1 (ENSMICG00000041835)	WFIKKN2 (ENSMICG00000037081)	ENSMICG00000009835	ANKRD40 (ENSMICG00000009832)	ABCC3 (ENSMICG00000009822)	CACNA1G (ENSMICG00000009782)	SPATA20 (ENSMICG00000009762)	EPN3 (ENSMICG00000009752)	MYCBPAP (ENSMICG00000009732)	RSAD1 (ENSMICG00000033136)	ACSF2 (ENSMICG00000009718)	CHAD (ENSMICG00000027984) ##23
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT01090000261778	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23	ENSGT00940000156830
Greater bamboo lemur	MODERN SPECIES	425			ENSPSMG00000008281	PCTP (ENSPSMG00000008309)	TMEM100 (ENSPSMG00000008314)	SMIM36 (ENSPSMG00000008322)	MMD (ENSPSMG00000008347)	ENSPSMG00000008355	HLF (ENSPSMG00000008371)	STXBP4 (ENSPSMG00000008505)	COX11 (ENSPSMG00000008600)	TOM1L1 (ENSPSMG00000008680)	KIF2B (ENSPSMG00000008719)	CA10 (ENSPSMG00000008752)	UTP18 (ENSPSMG00000008793)	MBTD1 (ENSPSMG00000008829) ##22	ENSPSMG00000008885	SPAG9 (ENSPSMG00000009194)	TOB1 (ENSPSMG00000009445)	WFIKKN2 (ENSPSMG00000009450)	ANKRD40CL (ENSPSMG00000009457)	LUC7L3 (ENSPSMG00000009519)	ANKRD40 (ENSPSMG00000009534)	ABCC3 (ENSPSMG00000009634)	CACNA1G (ENSPSMG00000011879)	SPATA20 (ENSPSMG00000015699)	EPN3 (ENSPSMG00000015742)	MYCBPAP (ENSPSMG00000015811)	RSAD1 (ENSPSMG00000015835)	ACSF2 (ENSPSMG00000015937)	CHAD (ENSPSMG00000015959) ##23
Coquerels sifaka	MODERN SPECIES	120															UTP18 (ENSPCOG00000018750)	MBTD1 (ENSPCOG00000020917) ##22	ENSPCOG00000019950	SPAG9 (ENSPCOG00000023553)	TOB1 (ENSPCOG00000012977)	WFIKKN2 (ENSPCOG00000026784)	LUC7L3 (ENSPCOG00000022270)	ANKRD40 (ENSPCOG00000023277)	ABCC3 (ENSPCOG00000022785)	CACNA1G (ENSPCOG00000020519)	SPATA20 (ENSPCOG00000024466)	EPN3 (ENSPCOG00000025887)	MYCBPAP (ENSPCOG00000028417)	RSAD1 (ENSPCOG00000019679)	CHAD (ENSPCOG00000023064) ##23	ACSF2 (ENSPCOG00000021413)	LRRC59 (ENSPCOG00000019835)
Bushbaby	MODERN SPECIES	277				MMD (ENSOGAG00000005902)	HLF (ENSOGAG00000007056)	STXBP4 (ENSOGAG00000007052)	COX11 (ENSOGAG00000033893)	TOM1L1 (ENSOGAG00000030978)	KIF2B (ENSOGAG00000013739)	CA10 (ENSOGAG00000004991)	ENSOGAG00000031470	ENSOGAG00000025750	ENSOGAG00000032011	ENSOGAG00000032670	UTP18 (ENSOGAG00000000006)	MBTD1 (ENSOGAG00000000409) ##22	NME2 (ENSOGAG00000025331)	SPAG9 (ENSOGAG00000004059)	ENSOGAG00000031428	ENSOGAG00000032842	WFIKKN2 (ENSOGAG00000008880)	LUC7L3 (ENSOGAG00000004535)	ANKRD40 (ENSOGAG00000004534)
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000153840.a.a ##22
Hedgehog	MODERN SPECIES	712																MBTD1 (ENSEEUG00000015481) ##22
Common shrew	MODERN SPECIES	8150																MBTD1 (ENSSARG00000008084) ##22
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Suina	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Pig	MODERN SPECIES	3	ENSSSCG00000025681	ENSSSCG00000017608	TMEM100 (ENSSSCG00000017607)	SMIM36 (ENSSSCG00000054589)	MMD (ENSSSCG00000017605)	HLF (ENSSSCG00000017604)	STXBP4 (ENSSSCG00000017602)	COX11 (ENSSSCG00000031433)	TOM1L1 (ENSSSCG00000017601)	ENSSSCG00000047020	ENSSSCG00000048537	KIF2B (ENSSSCG00000017599)	CA10 (ENSSSCG00000023169)	ENSSSCG00000046490	UTP18 (ENSSSCG00000017593)	MBTD1 (ENSSSCG00000017592) ##22	NME2 (ENSSSCG00000017591)	NME1 (ENSSSCG00000038348)	ENSSSCG00000045459	SPAG9 (ENSSSCG00000033228)	WFIKKN2 (ENSSSCG00000017557)	ANKRD40CL (ENSSSCG00000017556)	LUC7L3 (ENSSSCG00000017555)	ENSSSCG00000055086	ANKRD40 (ENSSSCG00000038760)	ABCC3 (ENSSSCG00000017561)	CACNA1G (ENSSSCG00000017562)	SPATA20 (ENSSSCG00000017565)	EPN3 (ENSSSCG00000027226)	MYCBPAP (ENSSSCG00000017563)	RSAD1 (ENSSSCG00000017567)
Chacoan peccary	MODERN SPECIES	145	NOG (ENSCWAG00000008961)	ANKFN1 (ENSCWAG00000009015)	ENSCWAG00000009658	ENSCWAG00000009884	TMEM100 (ENSCWAG00000010036)	SMIM36 (ENSCWAG00000010049)	MMD (ENSCWAG00000010067)	HLF (ENSCWAG00000010132)	STXBP4 (ENSCWAG00000010178)	COX11 (ENSCWAG00000010251)	TOM1L1 (ENSCWAG00000010303)	ENSCWAG00000010351	KIF2B (ENSCWAG00000010379)	CA10 (ENSCWAG00000010395)	UTP18 (ENSCWAG00000010499)	MBTD1 (ENSCWAG00000010559) ##22	NME2 (ENSCWAG00000010611)	NME1 (ENSCWAG00000010656)	SPAG9 (ENSCWAG00000010738)	TOB1 (ENSCWAG00000011408)	WFIKKN2 (ENSCWAG00000011423)	ANKRD40CL (ENSCWAG00000011466)	LUC7L3 (ENSCWAG00000011580)	ANKRD40 (ENSCWAG00000011640)	ABCC3 (ENSCWAG00000011693)	CACNA1G (ENSCWAG00000013050)	SPATA20 (ENSCWAG00000021972)	EPN3 (ENSCWAG00000021973)	MYCBPAP (ENSCWAG00000021974)	RSAD1 (ENSCWAG00000021975)	ACSF2 (ENSCWAG00000021976)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Cetacea	ANCESTRAL SPECIES	5	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00960000193237	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555.d	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240.e.a	ENSGT00940000163180	ENSGT00940000155223.a.b	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00390000007225.g.a.b	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Odontoceti	ANCESTRAL SPECIES	16															ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00390000007225.g.a.b	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Odontoceti_a	ANCESTRAL SPECIES	14															ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00390000007225.g.a.b	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Dolphin	MODERN SPECIES	3069																MBTD1 (ENSTTRG00000007434) ##22	NME2 (ENSTTRG00000007433)
Odontoceti_b	ANCESTRAL SPECIES	16															ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00390000007225.g.a.b	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Monodontidae	ANCESTRAL SPECIES	16														ENSGT00530000063282.pb.a.b.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00390000007225.g.a.b	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Narwhal	MODERN SPECIES	316	CCL14 (ENSMMNG00015018458)	CCL16 (ENSMMNG00015018475)	ENSMMNG00015018499	HEATR9 (ENSMMNG00015018520)	TAF15 (ENSMMNG00015018630)	MMP28 (ENSMMNG00015018658)	C17orf50 (ENSMMNG00015018683)	GAS2L2 (ENSMMNG00015018720)	RASL10B (ENSMMNG00015018782)	AP2B1 (ENSMMNG00015018876)	ENSMMNG00015019123	ENSMMNG00015019174	ENSMMNG00015019311	ENSMMNG00015019539	UTP18 (ENSMMNG00015019839)	MBTD1 (ENSMMNG00015019943) ##22	NME1 (ENSMMNG00015019993)	ENSMMNG00015020026	ENSMMNG00015020040	SPAG9 (ENSMMNG00015020158)	TOB1 (ENSMMNG00015020379)	WFIKKN2 (ENSMMNG00015020389)	ENSMMNG00015020406	LUC7L3 (ENSMMNG00015020441)	ANKRD40 (ENSMMNG00015020484)	ABCC3 (ENSMMNG00015020502)	CACNA1G (ENSMMNG00015021705)	SPATA20 (ENSMMNG00015022011)	EPN3 (ENSMMNG00015022013)	MYCBPAP (ENSMMNG00015022015)	RSAD1 (ENSMMNG00015022016)
Beluga whale	MODERN SPECIES	26	CDC27 (ENSDLEG00000003875)	KANSL1 (ENSDLEG00000003830)	ENSDLEG00000003798	SPPL2C (ENSDLEG00000003788)	CRHR1 (ENSDLEG00000003774)	ENSDLEG00000003762	NSF (ENSDLEG00000003751)	WNT3 (ENSDLEG00000003747)	WNT9B (ENSDLEG00000003737)	GOSR2 (ENSDLEG00000003733)	RPRML (ENSDLEG00000003730)	ENSDLEG00000003728	LYZL6 (ENSDLEG00000003723)	ENSDLEG00000003716	UTP18 (ENSDLEG00000003708)	MBTD1 (ENSDLEG00000003691) ##22	NME2 (ENSDLEG00000003681)	ENSDLEG00000003674	SPAG9 (ENSDLEG00000005756)	TOB1 (ENSDLEG00000005734)	WFIKKN2 (ENSDLEG00000005727)	LUC7L3 (ENSDLEG00000005683)	ANKRD40 (ENSDLEG00000005670)	ABCC3 (ENSDLEG00000005407)	CACNA1G (ENSDLEG00000005351)	SPATA20 (ENSDLEG00000005330)	EPN3 (ENSDLEG00000005325)	MYCBPAP (ENSDLEG00000005299)	RSAD1 (ENSDLEG00000005284)	CHAD (ENSDLEG00000005274) ##23	ACSF2 (ENSDLEG00000005263)
Vaquita	MODERN SPECIES	12	GAS2L2 (ENSPSNG00000020294)	RASL10B (ENSPSNG00000020374)	ENSPSNG00000020434	ENSPSNG00000020484	ENSPSNG00000020497	ENSPSNG00000020551	ENSPSNG00000020619	ENSPSNG00000020639	ENSPSNG00000020657	ENSPSNG00000020693	ENSPSNG00000020758	ENSPSNG00000020878	ENSPSNG00000021206	ENSPSNG00000021217	UTP18 (ENSPSNG00000021239)	MBTD1 (ENSPSNG00000021287) ##22	ENSPSNG00000021325	NME1 (ENSPSNG00000021355)	ENSPSNG00000021379	SPAG9 (ENSPSNG00000021447)	TOB1 (ENSPSNG00000021620)	WFIKKN2 (ENSPSNG00000021631)	ANKRD40CL (ENSPSNG00000021670)	LUC7L3 (ENSPSNG00000021718)	ANKRD40 (ENSPSNG00000021733)	ABCC3 (ENSPSNG00000021787)	CACNA1G (ENSPSNG00000022489)	SPATA20 (ENSPSNG00000022613)	MYCBPAP (ENSPSNG00000022617)	RSAD1 (ENSPSNG00000022620)	ACSF2 (ENSPSNG00000022621)
Sperm whale	MODERN SPECIES	5	STXBP4 (ENSPCTG00005013424)	COX11 (ENSPCTG00005013577)	TOM1L1 (ENSPCTG00005013661)	ENSPCTG00005014374	ENSPCTG00005014390	CA10 (ENSPCTG00005014413)	ENSPCTG00005014668	ENSPCTG00005015281	ENSPCTG00005015330	ENSPCTG00005015485	ENSPCTG00005015510	ENSPCTG00005015551	ENSPCTG00005015587	ENSPCTG00005015627	UTP18 (ENSPCTG00005015661)	MBTD1 (ENSPCTG00005015723) ##22	NME2 (ENSPCTG00005015808)	NME1 (ENSPCTG00005015875)	ENSPCTG00005015932	SPAG9 (ENSPCTG00005016007)	TOB1 (ENSPCTG00005016701)	WFIKKN2 (ENSPCTG00005016718)	ANKRD40CL (ENSPCTG00005016774)	LUC7L3 (ENSPCTG00005016897)	ANKRD40 (ENSPCTG00005016980)	ABCC3 (ENSPCTG00005017033)	CACNA1G (ENSPCTG00005018367)	SPATA20 (ENSPCTG00005022503)	ENSPCTG00005022511	MYCBPAP (ENSPCTG00005022515)	RSAD1 (ENSPCTG00005022518)
Blue whale	MODERN SPECIES	12	C1QL1 (ENSBMSG00010017773)	ENSBMSG00010017794	DCAKD (ENSBMSG00010017816)	NMT1 (ENSBMSG00010017846)	PLCD3 (ENSBMSG00010017874)	ACBD4 (ENSBMSG00010017896)	HEXIM1 (ENSBMSG00010017902)	HEXIM2 (ENSBMSG00010017910)	FMNL1 (ENSBMSG00010017931)	ENSBMSG00010018050	ENSBMSG00010018079	MAP3K14 (ENSBMSG00010018112)	PLEKHM1 (ENSBMSG00010018204)	ENSBMSG00010018561	UTP18 (ENSBMSG00010018585)	MBTD1 (ENSBMSG00010018624) ##22	NME2 (ENSBMSG00010018643)	NME1 (ENSBMSG00010018679)	ENSBMSG00010018699	SPAG9 (ENSBMSG00010018774)	TOB1 (ENSBMSG00010019146)	WFIKKN2 (ENSBMSG00010019158)	ANKRD40CL (ENSBMSG00010019184)	ENSBMSG00010019224	ANKRD40 (ENSBMSG00010019258)	CACNA1G (ENSBMSG00010021057)	SPATA20 (ENSBMSG00010022486)	EPN3 (ENSBMSG00010022491)	MYCBPAP (ENSBMSG00010022497)	RSAD1 (ENSBMSG00010022500)	ACSF2 (ENSBMSG00010022503)
Pecora	ANCESTRAL SPECIES	1	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Percora_a	ANCESTRAL SPECIES	2	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00990000204089	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Bovidae	ANCESTRAL SPECIES	2	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00990000204089	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Bovinae	ANCESTRAL SPECIES		ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00940000166360	ENSGT00940000161491.d.j	ENSGT00940000162296	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l.a	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Bos	ANCESTRAL SPECIES	1	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00940000162296.ab	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000171652	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l.a	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Bos_b	ANCESTRAL SPECIES	15	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000171652	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l.a	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00390000018141.i.a.b.a.b.b	ENSGT00940000161624	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.b.b.a.a.b.a.b.b.b	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217
Cow	MODERN SPECIES	10	RASD1 (ENSBTAG00000020520)	MED9 (ENSBTAG00000020517)	NT5M (ENSBTAG00000030820)	COPS3 (ENSBTAG00000018973)	FLCN (ENSBTAG00000008010)	PLD6 (ENSBTAG00000008009)	MPRIP (ENSBTAG00000010534)	TNFRSF13B (ENSBTAG00000015298)	USP22 (ENSBTAG00000008978)	DHRS7B (ENSBTAG00000010559)	ENSBTAG00000054307	TMEM11 (ENSBTAG00000010566)	MAP2K3 (ENSBTAG00000010576)	KCNJ12 (ENSBTAG00000020061)	UTP18 (ENSBTAG00000020629)	MBTD1 (ENSBTAG00000009407) ##22	NME2 (ENSBTAG00000047186)	NME1 (ENSBTAG00000004651)	SPAG9 (ENSBTAG00000012293)	ENSBTAG00000049579	TOB1 (ENSBTAG00000000546)	WFIKKN2 (ENSBTAG00000000731)	ANKRD40CL (ENSBTAG00000025183)	LUC7L3 (ENSBTAG00000002279)	ANKRD40 (ENSBTAG00000002267)	ENSBTAG00000053257	ABCC3 (ENSBTAG00000020070)	ENSBTAG00000054449	CACNA1G (ENSBTAG00000009835)	SPATA20 (ENSBTAG00000004155)	EPN3 (ENSBTAG00000015893)
Hybrid Bos Indicus	MODERN SPECIES	10	NT5M (ENSBIXG00005012241)	COPS3 (ENSBIXG00005012187)	FLCN (ENSBIXG00005012063)	PLD6 (ENSBIXG00005012037)	MPRIP (ENSBIXG00005011986)	TNFRSF13B (ENSBIXG00005011812)	USP22 (ENSBIXG00005011779)	DHRS7B (ENSBIXG00005001153)	ENSBIXG00005011691	TMEM11 (ENSBIXG00005011680)	NATD1 (ENSBIXG00005011670)	MAP2K3 (ENSBIXG00005011654)	ENSBIXG00005011632	UTP18 (ENSBIXG00005001133)	ENSBIXG00005011537	MBTD1 (ENSBIXG00005000449) ##22	NME2 (ENSBIXG00005005816)	SPAG9 (ENSBIXG00005005379)	ENSBIXG00005011012	TOB1 (ENSBIXG00005011003)	WFIKKN2 (ENSBIXG00005010983)	ENSBIXG00005006203	LUC7L3 (ENSBIXG00005000966)	ANKRD40 (ENSBIXG00005010739)	ENSBIXG00005010721	ABCC3 (ENSBIXG00005010704)	ENSBIXG00005010655	CACNA1G (ENSBIXG00005010472)	SPATA20 (ENSBIXG00005009303)	EPN3 (ENSBIXG00005009285)	MYCBPAP (ENSBIXG00005009257)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000154450	ENSGT00530000063881.a.b	ENSGT00940000165247	ENSGT00940000158171	ENSGT00390000006617	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00940000162296.ab	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000171652	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l.a	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Wild yak	MODERN SPECIES	319															UTP18 (ENSBMUG00000018878)	MBTD1 (ENSBMUG00000018923) ##22	ENSBMUG00000018942	NME1 (ENSBMUG00000018966)	SPAG9 (ENSBMUG00000019185)	ENSBMUG00000019217	TOB1 (ENSBMUG00000019231)	WFIKKN2 (ENSBMUG00000019244)	ENSBMUG00000019304	LUC7L3 (ENSBMUG00000019358)	ANKRD40 (ENSBMUG00000019386)	ABCC3 (ENSBMUG00000019422)	CACNA1G (ENSBMUG00000021324)	SPATA20 (ENSBMUG00000021962)	EPN3 (ENSBMUG00000021977)	MYCBPAP (ENSBMUG00000021987)	RSAD1 (ENSBMUG00000022000)
Domestic yak	MODERN SPECIES	10	MED9 (ENSBGRG00000013206)	NT5M (ENSBGRG00000013096)	COPS3 (ENSBGRG00000012719)	FLCN (ENSBGRG00000012604)	PLD6 (ENSBGRG00000012551)	ENSBGRG00000011768	TNFRSF13B (ENSBGRG00000011580)	USP22 (ENSBGRG00000011200)	ENSBGRG00000011145	DHRS7B (ENSBGRG00000010901)	TMEM11 (ENSBGRG00000010820)	MAP2K3 (ENSBGRG00000010601)	ENSBGRG00000010579	ENSBGRG00000010568	UTP18 (ENSBGRG00000010434)	MBTD1 (ENSBGRG00000010329) ##22	NME2 (ENSBGRG00000010251)	NME1 (ENSBGRG00000010184)	SPAG9 (ENSBGRG00000009172)	TOB1 (ENSBGRG00000009103)	WFIKKN2 (ENSBGRG00000009054)	ENSBGRG00000008970	LUC7L3 (ENSBGRG00000008710)	ANKRD40 (ENSBGRG00000008673)	ENSBGRG00000008662	ABCC3 (ENSBGRG00000008314)	CACNA1G (ENSBGRG00000007753)	SPATA20 (ENSBGRG00000007324)	EPN3 (ENSBGRG00000007020)	ENSBGRG00000006975	MYCBPAP (ENSBGRG00000006682)
American bison	MODERN SPECIES	3101	NT5M (ENSBBBG00000001324)	COPS3 (ENSBBBG00000001267)	FLCN (ENSBBBG00000007988)	PLD6 (ENSBBBG00000003502)	ENSBBBG00000015417	ENSBBBG00000015430	USP22 (ENSBBBG00000015447)	ENSBBBG00000015455	DHRS7B (ENSBBBG00000003852)	TMEM11 (ENSBBBG00000003854)	NATD1 (ENSBBBG00000015477)	MAP2K3 (ENSBBBG00000003861)	ENSBBBG00000015512	ENSBBBG00000006843	UTP18 (ENSBBBG00000015533)	MBTD1 (ENSBBBG00000015576) ##22	ENSBBBG00000006994	NME1 (ENSBBBG00000015608)	SPAG9 (ENSBBBG00000015857)	TOB1 (ENSBBBG00000015888)	WFIKKN2 (ENSBBBG00000000777)	ENSBBBG00000015925	LUC7L3 (ENSBBBG00000002578)	ANKRD40 (ENSBBBG00000003977)	ABCC3 (ENSBBBG00000016002)	CACNA1G (ENSBBBG00000020028)	SPATA20 (ENSBBBG00000020250)	EPN3 (ENSBBBG00000020260)	MYCBPAP (ENSBBBG00000000703)	RSAD1 (ENSBBBG00000000668)	CHAD (ENSBBBG00000000642) ##23
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00990000204089	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Goat	MODERN SPECIES	10	PEMT (ENSCHIG00000008939)	RASD1 (ENSCHIG00000023608)	MED9 (ENSCHIG00000017348)	NT5M (ENSCHIG00000018056)	COPS3 (ENSCHIG00000011762)	FLCN (ENSCHIG00000027232)	PLD6 (ENSCHIG00000011493)	MPRIP (ENSCHIG00000016471)	USP22 (ENSCHIG00000025194)	DHRS7B (ENSCHIG00000012767)	TMEM11 (ENSCHIG00000021154)	NATD1 (ENSCHIG00000014741)	MAP2K3 (ENSCHIG00000014144)	ENSCHIG00000010300	UTP18 (ENSCHIG00000011901)	MBTD1 (ENSCHIG00000025953) ##22	NME2 (ENSCHIG00000021415)	NME1 (ENSCHIG00000017720)	ENSCHIG00000019182	SPAG9 (ENSCHIG00000023293)	TOB1 (ENSCHIG00000003822)	WFIKKN2 (ENSCHIG00000020790)	ANKRD40CL (ENSCHIG00000002887)	LUC7L3 (ENSCHIG00000012671)	ANKRD40 (ENSCHIG00000019765)	ABCC3 (ENSCHIG00000014984)	CACNA1G (ENSCHIG00000008392)	SPATA20 (ENSCHIG00000013775)	EPN3 (ENSCHIG00000023207)	MYCBPAP (ENSCHIG00000018463)	RSAD1 (ENSCHIG00000024657)
Rambouillet Sheep	MODERN SPECIES	2	PEMT (ENSOARG00020026234)	RASD1 (ENSOARG00020026233)	MED9 (ENSOARG00020026226)	NT5M (ENSOARG00020026224)	COPS3 (ENSOARG00020026222)	FLCN (ENSOARG00020026219)	PLD6 (ENSOARG00020026218)	TNFRSF13B (ENSOARG00020026216)	USP22 (ENSOARG00020026213)	DHRS7B (ENSOARG00020026209)	TMEM11 (ENSOARG00020026207)	NATD1 (ENSOARG00020026204)	MAP2K3 (ENSOARG00020026202)	KCNJ12 (ENSOARG00020026201)	UTP18 (ENSOARG00020026199)	MBTD1 (ENSOARG00020026196) ##22	NME2 (ENSOARG00020026194)	NME1 (ENSOARG00020026191)	SPAG9 (ENSOARG00020026178)	ENSOARG00020026155	TOB1 (ENSOARG00020026153)	WFIKKN2 (ENSOARG00020026152)	ANKRD40CL (ENSOARG00020026151)	ANKRD40 (ENSOARG00020026149)	ABCC3 (ENSOARG00020026144)	CACNA1G (ENSOARG00020015735)	SPATA20 (ENSOARG00020014365)	EPN3 (ENSOARG00020014247)	LUC7L3 (ENSOARG00020014101)	MYCBPAP (ENSOARG00020013875)	RSAD1 (ENSOARG00020013799)
Siberian musk deer	MODERN SPECIES	1210	MED9 (ENSMMSG00000024398)	NT5M (ENSMMSG00000024400)	ENSMMSG00000024401	COPS3 (ENSMMSG00000016297)	FLCN (ENSMMSG00000016358)	PLD6 (ENSMMSG00000016404)	MPRIP (ENSMMSG00000016476)	TNFRSF13B (ENSMMSG00000016808)	USP22 (ENSMMSG00000016916)	DHRS7B (ENSMMSG00000016978)	TMEM11 (ENSMMSG00000017004)	NATD1 (ENSMMSG00000017018)	MAP2K3 (ENSMMSG00000017043)	ENSMMSG00000017081	UTP18 (ENSMMSG00000017091)	MBTD1 (ENSMMSG00000017124) ##22	ENSMMSG00000017175	ENSMMSG00000017195	NME1 (ENSMMSG00000017238)	ENSMMSG00000017275	SPAG9 (ENSMMSG00000017328)	TOB1 (ENSMMSG00000017677)	WFIKKN2 (ENSMMSG00000017692)	ANKRD40CL (ENSMMSG00000017719)	LUC7L3 (ENSMMSG00000017767)	ENSMMSG00000017814	ANKRD40 (ENSMMSG00000017837)	ABCC3 (ENSMMSG00000017877)	CACNA1G (ENSMMSG00000019001)	SPATA20 (ENSMMSG00000024429)	EPN3 (ENSMMSG00000024431)
Yarkand deer	MODERN SPECIES	28	RASD1 (ENSCHYG00000025541)	MED9 (ENSCHYG00000025568)	NT5M (ENSCHYG00000025584)	COPS3 (ENSCHYG00000025639)	FLCN (ENSCHYG00000025763)	PLD6 (ENSCHYG00000025777)	MPRIP (ENSCHYG00000000161)	ENSCHYG00000000291	TNFRSF13B (ENSCHYG00000000313)	USP22 (ENSCHYG00000000335)	DHRS7B (ENSCHYG00000000373)	TMEM11 (ENSCHYG00000000398)	MAP2K3 (ENSCHYG00000000425)	ENSCHYG00000000477	UTP18 (ENSCHYG00000000487)	MBTD1 (ENSCHYG00000000538) ##22	NME2 (ENSCHYG00000000563)	NME1 (ENSCHYG00000000589)	ENSCHYG00000000611	SPAG9 (ENSCHYG00000000639)	TOB1 (ENSCHYG00000000856)	WFIKKN2 (ENSCHYG00000000860)	ENSCHYG00000000863	ANKRD40CL (ENSCHYG00000000877)	LUC7L3 (ENSCHYG00000000913)	ENSCHYG00000000952	ABCC3 (ENSCHYG00000000970)	CACNA1G (ENSCHYG00000001327)	SPATA20 (ENSCHYG00000002682)	EPN3 (ENSCHYG00000002727)	MYCBPAP (ENSCHYG00000002753)
Camelidae	ANCESTRAL SPECIES	102																ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
Arabian camel	MODERN SPECIES	7	KRT35 (ENSCDRG00005010292)	KRT36 (ENSCDRG00005010467)	ENSCDRG00005010651	KRT15 (ENSCDRG00005010831)	KRT19 (ENSCDRG00005011031)	ENSCDRG00005011084	KRT14 (ENSCDRG00005011145)	KRT17 (ENSCDRG00005011420)	ENSCDRG00005011549	EIF1 (ENSCDRG00005011615)	GAST (ENSCDRG00005011677)	HAP1 (ENSCDRG00005011720)	JUP (ENSCDRG00005003373)	FKBP10 (ENSCDRG00005003410)	ENSCDRG00005003445	MBTD1 (ENSCDRG00005003547) ##22	ENSCDRG00005003645	ENSCDRG00005003757	NME1 (ENSCDRG00005003807)	SPAG9 (ENSCDRG00005003908)	TOB1 (ENSCDRG00005004090)	WFIKKN2 (ENSCDRG00005004111)	ANKRD40CL (ENSCDRG00005004137)	LUC7L3 (ENSCDRG00005004195)	ANKRD40 (ENSCDRG00005004421)	ABCC3 (ENSCDRG00005004448)	CACNA1G (ENSCDRG00005005492)	SPATA20 (ENSCDRG00005022016)	EPN3 (ENSCDRG00005022028)	MYCBPAP (ENSCDRG00005022030)	RSAD1 (ENSCDRG00005022035)
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Carnivora	ANCESTRAL SPECIES	9	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Caniformia	ANCESTRAL SPECIES	6	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.a.a	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.a.a	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.a.a.a	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
American mink	MODERN SPECIES	92	NOG (ENSNVIG00000012278)	ANKFN1 (ENSNVIG00000012196)	ENSNVIG00000012174	PPCT (ENSNVIG00000012129)	TM100 (ENSNVIG00000012117)	SMIM36 (ENSNVIG00000012112)	MMD (ENSNVIG00000012081)	HLF (ENSNVIG00000012066)	STXBP4 (ENSNVIG00000012026)	COX11 (ENSNVIG00000012012)	TOM1L1 (ENSNVIG00000011956)	ENSNVIG00000011929	KIF2B (ENSNVIG00000011908)	CA10 (ENSNVIG00000011875)	UTP18 (ENSNVIG00000011842)	MBTD1 (ENSNVIG00000011807) ##22	NME2 (ENSNVIG00000011788)	ENSNVIG00000011774	ENSNVIG00000011756	SPAG9 (ENSNVIG00000011476)	TOB1 (ENSNVIG00000011447)	WFIKKN2 (ENSNVIG00000011437)	ANKRD40CL (ENSNVIG00000011421)	LUC7L3 (ENSNVIG00000011376)	ANKRD40 (ENSNVIG00000011348)	ABCC3 (ENSNVIG00000011305)	CACNA1G (ENSNVIG00000008177)	SPATA20 (ENSNVIG00000007983)	EPN3 (ENSNVIG00000007933)	MYCBPAP (ENSNVIG00000007622)	RSAD1 (ENSNVIG00000007570)
Ferret	MODERN SPECIES	270													ENSMPUG00000015612	CA10 (ENSMPUG00000015610)	UTP18 (ENSMPUG00000015582)	MBTD1 (ENSMPUG00000015580) ##22	NME2 (ENSMPUG00000015573)	NME1 (ENSMPUG00000015559)	SPAG9 (ENSMPUG00000015555)	TOB1 (ENSMPUG00000020088)	WFIKKN2 (ENSMPUG00000015554)	ENSMPUG00000015552	ANKRD40CL (ENSMPUG00000015550)	LUC7L3 (ENSMPUG00000015532)	ANKRD40 (ENSMPUG00000015517)	ABCC3 (ENSMPUG00000015510)	CACNA1G (ENSMPUG00000015502)	SPATA20 (ENSMPUG00000015483)	EPN3 (ENSMPUG00000015482)	MYCBPAP (ENSMPUG00000015480)	RSAD1 (ENSMPUG00000015479)
Ursidae	ANCESTRAL SPECIES	18	ENSGT00940000160741	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.a.a	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b.j	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Ursus	ANCESTRAL SPECIES	67													ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.a.a	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b.j	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Polar bear	MODERN SPECIES	94													KIF2B (ENSUMAG00000012459)	CA10 (ENSUMAG00000012475)	UTP18 (ENSUMAG00000012481)	MBTD1 (ENSUMAG00000012486) ##22	ENSUMAG00000012495	ENSUMAG00000012496	SPAG9 (ENSUMAG00000012685)	TOB1 (ENSUMAG00000014045)	WFIKKN2 (ENSUMAG00000014047)	ANKRD40CL (ENSUMAG00000014050)	LUC7L3 (ENSUMAG00000014056)	ANKRD40 (ENSUMAG00000014067)	ABCC3 (ENSUMAG00000014139)	ENSUMAG00000014702	SPATA20 (ENSUMAG00000014717)	ENSUMAG00000014739	MYCBPAP (ENSUMAG00000014745)	RSAD1 (ENSUMAG00000014768)	ACSF2 (ENSUMAG00000014777)
American black bear	MODERN SPECIES	2610															UTP18 (ENSUAMG00000024557)	MBTD1 (ENSUAMG00000024549) ##22
Giant Panda	MODERN SPECIES	4	C17orf67 (ENSAMEG00000002816)	NOG (ENSAMEG00000024785)	ANKFN1 (ENSAMEG00000002831)	ENSAMEG00000029089	TMEM100 (ENSAMEG00000020050)	ENSAMEG00000019806	SMIM36 (ENSAMEG00000026714)	MMD (ENSAMEG00000014728)	HLF (ENSAMEG00000014714)	STXBP4 (ENSAMEG00000014697)	COX11 (ENSAMEG00000025314)	TOM1L1 (ENSAMEG00000014662)	KIF2B (ENSAMEG00000004637)	CA10 (ENSAMEG00000016952)	UTP18 (ENSAMEG00000008097)	MBTD1 (ENSAMEG00000008054) ##22	ENSAMEG00000008022	SPAG9 (ENSAMEG00000007856)	TOB1 (ENSAMEG00000020123)	WFIKKN2 (ENSAMEG00000007848)	ANKRD40CL (ENSAMEG00000007841)	LUC7L3 (ENSAMEG00000007790)	ANKRD40 (ENSAMEG00000007780)	ABCC3 (ENSAMEG00000007602)	CACNA1G (ENSAMEG00000007344)	SPATA20 (ENSAMEG00000007546)	EPN3 (ENSAMEG00000029713)	MYCBPAP (ENSAMEG00000011756)	RSAD1 (ENSAMEG00000011792)	ACSF2 (ENSAMEG00000011804)	CHAD (ENSAMEG00000011848) ##23
Canidae	ANCESTRAL SPECIES	2	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843.o.a	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000163317	ENSGT00390000003248.b	ENSGT00940000153496.a.b	ENSGT00940000157455.b.d.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000156843.o.b	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213.b	ENSGT00940000162213.a.a.d	ENSGT00940000153496.a.b	ENSGT00940000157455.b.d.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Dog	MODERN SPECIES	37	PCTP (ENSCAFG00845017094)	TMEM100 (ENSCAFG00845016727)	SMIM36 (ENSCAFG00845016687)	MMD (ENSCAFG00845016643)	HLF (ENSCAFG00845016598)	STXBP4 (ENSCAFG00845016430)	COX11 (ENSCAFG00845016207)	TOM1L1 (ENSCAFG00845016013)	ENSCAFG00845015952	ENSCAFG00845015932	ENSCAFG00845015890	KIF2B (ENSCAFG00845015752)	CA10 (ENSCAFG00845015639)	ENSCAFG00845015581	UTP18 (ENSCAFG00845015483)	MBTD1 (ENSCAFG00845015245) ##22	NME2 (ENSCAFG00845015173)	NME1 (ENSCAFG00845015140)	SPAG9 (ENSCAFG00845014917)	TOB1 (ENSCAFG00845014836)	WFIKKN2 (ENSCAFG00845014826)	ENSCAFG00845014801	LUC7L3 (ENSCAFG00845014680)	ANKRD40 (ENSCAFG00845014612)	ABCC3 (ENSCAFG00845014515)	CACNA1G (ENSCAFG00845013736)	SPATA20 (ENSCAFG00845013287)	EPN3 (ENSCAFG00845013193)	MYCBPAP (ENSCAFG00845013038)	RSAD1 (ENSCAFG00845012992)	CHAD (ENSCAFG00845012965) ##23
Dingo	MODERN SPECIES	150	ENSCAFG00020025596	ENSCAFG00020025594	PCTP (ENSCAFG00020025592)	TMEM100 (ENSCAFG00020025591)	MMD (ENSCAFG00020025586)	HLF (ENSCAFG00020025583)	STXBP4 (ENSCAFG00020025560)	COX11 (ENSCAFG00020025550)	TOM1L1 (ENSCAFG00020025548)	ENSCAFG00020025544	KIF2B (ENSCAFG00020025537)	ENSCAFG00020025530	CA10 (ENSCAFG00020025515)	ENSCAFG00020025508	UTP18 (ENSCAFG00020025506)	MBTD1 (ENSCAFG00020025501) ##22	ENSCAFG00020025499	ENSCAFG00020025497	ENSCAFG00020025495	SPAG9 (ENSCAFG00020024319)	ENSCAFG00020024228	TOB1 (ENSCAFG00020024227)	WFIKKN2 (ENSCAFG00020024226)	ANKRD40CL (ENSCAFG00020024224)	LUC7L3 (ENSCAFG00020024223)	ANKRD40 (ENSCAFG00020024222)	ENSCAFG00020024221	ENSCAFG00020024216	CACNA1G (ENSCAFG00020023914)	SPATA20 (ENSCAFG00020023695)	EPN3 (ENSCAFG00020023656)
Red fox	MODERN SPECIES	20	ENSVVUG00000011647	ENSVVUG00000011597	ENSVVUG00000011575	ENSVVUG00000011557	TMEM100 (ENSVVUG00000011549)	MMD (ENSVVUG00000011541)	HLF (ENSVVUG00000011529)	ENSVVUG00000011526	STXBP4 (ENSVVUG00000011517)	COX11 (ENSVVUG00000011512)	TOM1L1 (ENSVVUG00000011490)	KIF2B (ENSVVUG00000011478)	CA10 (ENSVVUG00000011449)	ENSVVUG00000011416	UTP18 (ENSVVUG00000011400)	MBTD1 (ENSVVUG00000011391) ##22	ENSVVUG00000011331	ENSVVUG00000011323	SPAG9 (ENSVVUG00000011253)	ENSVVUG00000011224	TOB1 (ENSVVUG00000011221)	WFIKKN2 (ENSVVUG00000011216)	ANKRD40CL (ENSVVUG00000011120)	LUC7L3 (ENSVVUG00000011112)	ANKRD40 (ENSVVUG00000011107)	ENSVVUG00000011100	ENSVVUG00000010988	CACNA1G (ENSVVUG00000005188)	SPATA20 (ENSVVUG00000004940)	EPN3 (ENSVVUG00000004919)	MYCBPAP (ENSVVUG00000004875)
Felidae	ANCESTRAL SPECIES	8	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
leopard	MODERN SPECIES	67	DGKE (ENSPPRG00000024093)	C17orf67 (ENSPPRG00000024269)	NOG (ENSPPRG00000021630)	ANKFN1 (ENSPPRG00000024449)	PCTP (ENSPPRG00000016895)	TMEM100 (ENSPPRG00000021594)	SMIM36 (ENSPPRG00000021579)	MMD (ENSPPRG00000016045)	HLF (ENSPPRG00000015612)	STXBP4 (ENSPPRG00000014766)	COX11 (ENSPPRG00000010750)	TOM1L1 (ENSPPRG00000010683)	KIF2B (ENSPPRG00000008742)	CA10 (ENSPPRG00000008658)	UTP18 (ENSPPRG00000007701)	MBTD1 (ENSPPRG00000007140) ##22	NME2 (ENSPPRG00000005581)	NME1 (ENSPPRG00000004142)	SPAG9 (ENSPPRG00000003342)	WFIKKN2 (ENSPPRG00000002737)	LUC7L3 (ENSPPRG00000002605)	ANKRD40 (ENSPPRG00000001942)	CACNA1G (ENSPPRG00000014704)	SPATA20 (ENSPPRG00000003620)	EPN3 (ENSPPRG00000000303)	MYCBPAP (ENSPPRG00000020455)	RSAD1 (ENSPPRG00000014726)	ACSF2 (ENSPPRG00000013112)	CHAD (ENSPPRG00000011428) ##23	LRRC59 (ENSPPRG00000010949)	EME1 (ENSPPRG00000010883)
lion	MODERN SPECIES	14	DGKE (ENSPLOG00000015015)	ENSPLOG00000015054	NOG (ENSPLOG00000015108)	ANKFN1 (ENSPLOG00000015173)	PCTP (ENSPLOG00000005538)	TMEM100 (ENSPLOG00000005580)	SMIM36 (ENSPLOG00000005592)	MMD (ENSPLOG00000005613)	HLF (ENSPLOG00000005641)	STXBP4 (ENSPLOG00000005684)	COX11 (ENSPLOG00000005723)	TOM1L1 (ENSPLOG00000005775)	KIF2B (ENSPLOG00000005886)	CA10 (ENSPLOG00000005944)	UTP18 (ENSPLOG00000006035)	MBTD1 (ENSPLOG00000006133) ##22	NME2 (ENSPLOG00000006166)	NME1 (ENSPLOG00000006214)	SPAG9 (ENSPLOG00000006351)	TOB1 (ENSPLOG00000006574)	WFIKKN2 (ENSPLOG00000006588)	LUC7L3 (ENSPLOG00000006670)	ANKRD40 (ENSPLOG00000006752)	ABCC3 (ENSPLOG00000006861)	CACNA1G (ENSPLOG00000008708)	SPATA20 (ENSPLOG00000018033)	EPN3 (ENSPLOG00000018503)	MYCBPAP (ENSPLOG00000018604)	RSAD1 (ENSPLOG00000018765)	ACSF2 (ENSPLOG00000018860)	CHAD (ENSPLOG00000018910) ##23
Tiger	MODERN SPECIES	247	TRIM25 (ENSPTIG00000005760)	DGKE (ENSPTIG00000002856)	C17orf67 (ENSPTIG00000020969)	ANKFN1 (ENSPTIG00000016949)	PCTP (ENSPTIG00000016455)	TMEM100 (ENSPTIG00000001263)	SMIM36 (ENSPTIG00000001252)	MMD (ENSPTIG00000014918)	HLF (ENSPTIG00000013852)	STXBP4 (ENSPTIG00000010134)	COX11 (ENSPTIG00000009787)	TOM1L1 (ENSPTIG00000021730)	KIF2B (ENSPTIG00000020627)	CA10 (ENSPTIG00000016926)	UTP18 (ENSPTIG00000015069)	MBTD1 (ENSPTIG00000010915) ##22	NME2 (ENSPTIG00000008426)	NME1 (ENSPTIG00000020171)	SPAG9 (ENSPTIG00000018617)	WFIKKN2 (ENSPTIG00000017205)	ENSPTIG00000016714	LUC7L3 (ENSPTIG00000014247)	ANKRD40 (ENSPTIG00000013823)	ENSPTIG00000013501	CACNA1G (ENSPTIG00000010136)	SPATA20 (ENSPTIG00000019966)	ENSPTIG00000018414	MYCBPAP (ENSPTIG00000014495)	RSAD1 (ENSPTIG00000013143)	CHAD (ENSPTIG00000012789) ##23	ACSF2 (ENSPTIG00000006315)
Cat	MODERN SPECIES	245	CE1H17orf67 (ENSFCAG00000019033)	NOG (ENSFCAG00000044468)	ANKFN1 (ENSFCAG00000045176)	PCTP (ENSFCAG00000023287)	TMEM100 (ENSFCAG00000000669)	SMIM36 (ENSFCAG00000048835)	MMD (ENSFCAG00000028125)	ENSFCAG00000048840	HLF (ENSFCAG00000022556)	STXBP4 (ENSFCAG00000025758)	COX11 (ENSFCAG00000034565)	TOM1L1 (ENSFCAG00000002879)	KIF2B (ENSFCAG00000030590)	CA10 (ENSFCAG00000002278)	UTP18 (ENSFCAG00000031396)	MBTD1 (ENSFCAG00000006743) ##22	NME2 (ENSFCAG00000036705)	NME1 (ENSFCAG00000044593)	SPAG9 (ENSFCAG00000006740)	TOB1 (ENSFCAG00000029367)	WFIKKN2 (ENSFCAG00000029597)	LUC7L3 (ENSFCAG00000012343)	ANKRD40 (ENSFCAG00000043849)	ABCC3 (ENSFCAG00000012340)	CACNA1G (ENSFCAG00000012339)	SPATA20 (ENSFCAG00000012338)	EPN3 (ENSFCAG00000012337)	MYCBPAP (ENSFCAG00000012336)	RSAD1 (ENSFCAG00000012335)	ACSF2 (ENSFCAG00000012334)	CHAD (ENSFCAG00000011301) ##23
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00910000148790	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Equus	ANCESTRAL SPECIES		ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843.m	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Horse	MODERN SPECIES	2	ENSECAG00000048512	PCTP (ENSECAG00000029088)	ENSECAG00000060362	TMEM100 (ENSECAG00000019376)	SMIM36 (ENSECAG00000042426)	ENSECAG00000029510	MMD (ENSECAG00000017588)	HLF (ENSECAG00000016953)	STXBP4 (ENSECAG00000016386)	COX11 (ENSECAG00000015531)	TOM1L1 (ENSECAG00000014174)	KIF2B (ENSECAG00000002842)	CA10 (ENSECAG00000013061)	UTP18 (ENSECAG00000008260)	NME2 (ENSECAG00000021658)	MBTD1 (ENSECAG00000022700) ##22	ENSECAG00000059404	SPAG9 (ENSECAG00000015256)	TOB1 (ENSECAG00000002814)	WFIKKN2 (ENSECAG00000015064)	ANKRD40CL (ENSECAG00000050391)	LUC7L3 (ENSECAG00000012760)	ANKRD40 (ENSECAG00000012574)	ABCC3 (ENSECAG00000001014)	CACNA1G (ENSECAG00000015461)	SPATA20 (ENSECAG00000008281)	EPN3 (ENSECAG00000004484)	MYCBPAP (ENSECAG00000000721)	RSAD1 (ENSECAG00000023248)	CHAD (ENSECAG00000053781) ##23	ACSF2 (ENSECAG00000019245)
Donkey	MODERN SPECIES	4	C17orf67 (ENSEASG00005016212)	NOG (ENSEASG00005028446)	ANKFN1 (ENSEASG00005016209)	ENSEASG00005028142	ENSEASG00005026345	TMEM100 (ENSEASG00005036961)	SMIM36 (ENSEASG00005025584)	MMD (ENSEASG00005016791)	HLF (ENSEASG00005033283)	STXBP4 (ENSEASG00005016828)	COX11 (ENSEASG00005016863)	TOM1L1 (ENSEASG00005016866)	KIF2B (ENSEASG00005016874)	CA10 (ENSEASG00005016878)	UTP18 (ENSEASG00005016882)	MBTD1 (ENSEASG00005016892) ##22	NME2 (ENSEASG00005016923)	ENSEASG00005016928	SPAG9 (ENSEASG00005016929)	ENSEASG00005026323	TOB1 (ENSEASG00005025637)	WFIKKN2 (ENSEASG00005036469)	ANKRD40CL (ENSEASG00005033595)	LUC7L3 (ENSEASG00005016944)	ANKRD40 (ENSEASG00005016954)	ABCC3 (ENSEASG00005017052)	CACNA1G (ENSEASG00005017449)	SPATA20 (ENSEASG00005018475)	EPN3 (ENSEASG00005018586)	MYCBPAP (ENSEASG00005018597)	RSAD1 (ENSEASG00005018609)
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000163317	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23
Megabat	MODERN SPECIES	3949														CA10 (ENSPVAG00000013905)	UTP18 (ENSPVAG00000013904)	MBTD1 (ENSPVAG00000013903) ##22	ENSPVAG00000013901	SPAG9 (ENSPVAG00000013899)	TOB1 (ENSPVAG00000013898)	WFIKKN2 (ENSPVAG00000013897)	LUC7L3 (ENSPVAG00000013895)
Microchiroptera	ANCESTRAL SPECIES		ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000154464.a ##23	ENSGT00390000017385
Microbat	MODERN SPECIES	1371													TMEM132E (ENSMLUG00000001054)	ENSMLUG00000010844	UTP18 (ENSMLUG00000016938)	MBTD1 (ENSMLUG00000016933) ##22	ENSMLUG00000016929	SPAG9 (ENSMLUG00000013525)	TOB1 (ENSMLUG00000005651)	WFIKKN2 (ENSMLUG00000005648)	ENSMLUG00000005637	ANKRD40 (ENSMLUG00000005626)	ABCC3 (ENSMLUG00000005613)	CACNA1G (ENSMLUG00000005593)	SPATA20 (ENSMLUG00000005575)	EPN3 (ENSMLUG00000005571)	MYCBPAP (ENSMLUG00000005561)	RSAD1 (ENSMLUG00000001099)
Greater horseshoe bat	MODERN SPECIES	13	ANKFN1 (ENSRFEG00010017007)	PCTP (ENSRFEG00010017794)	TMEM100 (ENSRFEG00010007151)	SMIM36 (ENSRFEG00010007172)	MMD (ENSRFEG00010007200)	ENSRFEG00010007249	STXBP4 (ENSRFEG00010007289)	ENSRFEG00010007436	COX11 (ENSRFEG00010007472)	TOM1L1 (ENSRFEG00010007508)	KIF2B (ENSRFEG00010007638)	ENSRFEG00010007658	CA10 (ENSRFEG00010007712)	ENSRFEG00010007794	UTP18 (ENSRFEG00010007828)	MBTD1 (ENSRFEG00010007877) ##22	ENSRFEG00010007940	SPAG9 (ENSRFEG00010008211)	TOB1 (ENSRFEG00010008504)	WFIKKN2 (ENSRFEG00010008523)	LUC7L3 (ENSRFEG00010008675)	ANKRD40 (ENSRFEG00010008756)	ABCC3 (ENSRFEG00010008811)	CACNA1G (ENSRFEG00010010093)	SPATA20 (ENSRFEG00010020941)	EPN3 (ENSRFEG00010020995)	ENSRFEG00010021013	RSAD1 (ENSRFEG00010021041)	ACSF2 (ENSRFEG00010021075)	CHAD (ENSRFEG00010021182) ##23	LRRC59 (ENSRFEG00010021200)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00940000165833	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Afrotheria	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Afrotheria_a	ANCESTRAL SPECIES	2	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Elephant	MODERN SPECIES	310	NOG (ENSLAFG00000009858)	ENSLAFG00000031115	ANKFN1 (ENSLAFG00000001242)	PCTP (ENSLAFG00000011993)	TMEM100 (ENSLAFG00000011800)	MMD (ENSLAFG00000012012)	HLF (ENSLAFG00000016475)	STXBP4 (ENSLAFG00000000761)	COX11 (ENSLAFG00000011891)	TOM1L1 (ENSLAFG00000011887)	ENSLAFG00000032494	KIF2B (ENSLAFG00000012598)	ENSLAFG00000026550	CA10 (ENSLAFG00000015886)	UTP18 (ENSLAFG00000000622)	MBTD1 (ENSLAFG00000007787) ##22	NME2 (ENSLAFG00000007784)	NME1 (ENSLAFG00000025643)	SPAG9 (ENSLAFG00000007773)	TOB1 (ENSLAFG00000008077)	WFIKKN2 (ENSLAFG00000008080)	ANKRD40CL (ENSLAFG00000030205)	LUC7L3 (ENSLAFG00000007054)	ENSLAFG00000030720	ANKRD40 (ENSLAFG00000007050)	ABCC3 (ENSLAFG00000007037)	CACNA1G (ENSLAFG00000007026)	SPATA20 (ENSLAFG00000022872)	EPN3 (ENSLAFG00000007024)	MYCBPAP (ENSLAFG00000030223)	RSAD1 (ENSLAFG00000007022)
Xenarthra	ANCESTRAL SPECIES	214													ENSGT00940000163180	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00940000165833	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000161624	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565
Armadillo	MODERN SPECIES	4152											KIF2B (ENSDNOG00000043934)	ENSDNOG00000040508	CA10 (ENSDNOG00000033523)	ENSDNOG00000037802	UTP18 (ENSDNOG00000014131)	MBTD1 (ENSDNOG00000044478) ##22	ENSDNOG00000032324	SPAG9 (ENSDNOG00000005493)	TOB1 (ENSDNOG00000048486)	WFIKKN2 (ENSDNOG00000036748)	ENSDNOG00000035561	ANKRD40 (ENSDNOG00000037399)	ABCC3 (ENSDNOG00000046300)	CACNA1G (ENSDNOG00000047894)	SPATA20 (ENSDNOG00000032944)	EPN3 (ENSDNOG00000035313)	MYCBPAP (ENSDNOG00000016313)
Platypus	MODERN SPECIES	6	SCPEP1 (ENSOANG00000010295)	ENSOANG00000037692	DGKE (ENSOANG00000010294)	ANKFN1 (ENSOANG00000010292)	ENSOANG00000038360	ENSOANG00000043440	ENSOANG00000042093	MMD (ENSOANG00000010289)	HLF (ENSOANG00000038682)	STXBP4 (ENSOANG00000008608)	ENSOANG00000043487	ENSOANG00000007277	ENSOANG00000049905	CA10 (ENSOANG00000002282)	ENSOANG00000003189	MBTD1 (ENSOANG00000003190) ##22	NME2 (ENSOANG00000011751)	NME1 (ENSOANG00000011750)	SPAG9 (ENSOANG00000010297)	WFIKKN2 (ENSOANG00000037242)	TOB1 (ENSOANG00000011577)	PXMP4 (ENSOANG00000048465)	ENSOANG00000037316	ENSOANG00000039248	ENSOANG00000013657	ENSOANG00000013656	XYLT2 (ENSOANG00000049975)	MRPL27 (ENSOANG00000048564)	ENSOANG00000043509	LRRC59 (ENSOANG00000041912)	CHAD (ENSOANG00000038576) ##23
Sauria	ANCESTRAL SPECIES	30	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Archelosauria	ANCESTRAL SPECIES	19	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Archosauria	ANCESTRAL SPECIES	12	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Aves	ANCESTRAL SPECIES	17	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Neognathae	ANCESTRAL SPECIES	17	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Neognathae_b	ANCESTRAL SPECIES	19	ENSGT00390000001390.a.b	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Passeriformes	ANCESTRAL SPECIES	17	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Great tit	MODERN SPECIES	8	COIL (ENSPMJG00000018078)	TRIM25 (ENSPMJG00000018079)	ENSPMJG00000018080	DGKE (ENSPMJG00000018081)	C17orf67 (ENSPMJG00000018082)	ANKFN1 (ENSPMJG00000018085)	PCTP (ENSPMJG00000018087)	TMEM100 (ENSPMJG00000018088)	MMD (ENSPMJG00000018090)	HLF (ENSPMJG00000018091)	STXBP4 (ENSPMJG00000018092)	COX11 (ENSPMJG00000018093)	TOM1L1 (ENSPMJG00000018094)	CA10 (ENSPMJG00000018097)	UTP18 (ENSPMJG00000018098)	MBTD1 (ENSPMJG00000018100) ##22	NME2 (ENSPMJG00000018099)	NME1 (ENSPMJG00000018101)	SPAG9 (ENSPMJG00000018102)	TOB1 (ENSPMJG00000018104)	WFIKKN2 (ENSPMJG00000018105)	ENSPMJG00000018106	LUC7L3 (ENSPMJG00000018107)	ANKRD40 (ENSPMJG00000018108)	ENSPMJG00000018109	CACNA1G (ENSPMJG00000018110)	SPATA20 (ENSPMJG00000018111)	EPN3 (ENSPMJG00000018112)	MYCBPAP (ENSPMJG00000018113)	RSAD1 (ENSPMJG00000018114)	ACSF2 (ENSPMJG00000018115)
Passeriformes_d	ANCESTRAL SPECIES	17	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Flycatcher	MODERN SPECIES	8	TRIM25 (ENSFALG00000002277)	ENSFALG00000002276	DGKE (ENSFALG00000002273)	C17orf67 (ENSFALG00000002272)	ANKFN1 (ENSFALG00000002269)	PCTP (ENSFALG00000002268)	MMD (ENSFALG00000025656)	HLF (ENSFALG00000002265)	STXBP4 (ENSFALG00000027545)	COX11 (ENSFALG00000002262)	TOM1L1 (ENSFALG00000002261)	ENSFALG00000027180	CA10 (ENSFALG00000000813)	ENSFALG00000028598	UTP18 (ENSFALG00000001407)	MBTD1 (ENSFALG00000001406) ##22	ENSFALG00000001403	SPAG9 (ENSFALG00000001401)	WFIKKN2 (ENSFALG00000027952)	TOB1 (ENSFALG00000015119)	ENSFALG00000026197	ENSFALG00000025723	LUC7L3 (ENSFALG00000001397)	ANKRD40 (ENSFALG00000001393)	ENSFALG00000001391	CACNA1G (ENSFALG00000001356)	SPATA20 (ENSFALG00000001344)	EPN3 (ENSFALG00000001342)	MYCBPAP (ENSFALG00000001334)	RSAD1 (ENSFALG00000001327)	ENSFALG00000001325
Passeriformes_g	ANCESTRAL SPECIES	20	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Passeroidea	ANCESTRAL SPECIES	19	ENSGT00390000001390.a.b	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Common canary	MODERN SPECIES	27	COIL (ENSSCAG00000014287)	TRIM25 (ENSSCAG00000014335)	DGKE (ENSSCAG00000014336)	C17orf67 (ENSSCAG00000014342)	NOG (ENSSCAG00000014344)	ENSSCAG00000014348	ENSSCAG00000014354	TMEM100 (ENSSCAG00000014362)	MMD (ENSSCAG00000014371)	HLF (ENSSCAG00000014375)	STXBP4 (ENSSCAG00000014383)	COX11 (ENSSCAG00000014401)	TOM1L1 (ENSSCAG00000014407)	CA10 (ENSSCAG00000014414)	UTP18 (ENSSCAG00000014422)	MBTD1 (ENSSCAG00000014430) ##22	NME2 (ENSSCAG00000014434)	NME1 (ENSSCAG00000014436)	SPAG9 (ENSSCAG00000014548)	TOB1 (ENSSCAG00000014889)	WFIKKN2 (ENSSCAG00000014890)	ENSSCAG00000014897	LUC7L3 (ENSSCAG00000014900)	ANKRD40 (ENSSCAG00000014911)	ENSSCAG00000014920	CACNA1G (ENSSCAG00000014940)	SPATA20 (ENSSCAG00000014964)	EPN3 (ENSSCAG00000015002)	MYCBPAP (ENSSCAG00000015008)	RSAD1 (ENSSCAG00000000035)	ACSF2 (ENSSCAG00000000082)
Zebra finch	MODERN SPECIES	9	DGKE (ENSTGUG00000009524)	C17orf67 (ENSTGUG00000009523)	NOG (ENSTGUG00000009521)	ANKFN1 (ENSTGUG00000022909)	PCTP (ENSTGUG00000022225)	TMEM100 (ENSTGUG00000009511)	SMIM36 (ENSTGUG00000028981)	MMD (ENSTGUG00000009491)	HLF (ENSTGUG00000028342)	STXBP4 (ENSTGUG00000009465)	COX11 (ENSTGUG00000027006)	TOM1L1 (ENSTGUG00000009453)	CA10 (ENSTGUG00000009427)	ENSTGUG00000021884	UTP18 (ENSTGUG00000009412)	MBTD1 (ENSTGUG00000009373) ##22	NME2 (ENSTGUG00000009349)	NME1 (ENSTGUG00000021211)	SPAG9 (ENSTGUG00000009239)	TOB1 (ENSTGUG00000009238)	WFIKKN2 (ENSTGUG00000009235)	ENSTGUG00000019708	LUC7L3 (ENSTGUG00000009216)	ANKRD40 (ENSTGUG00000009204)	ENSTGUG00000009151	CACNA1G (ENSTGUG00000009049)	SPATA20 (ENSTGUG00000009022)	EPN3 (ENSTGUG00000009010)	MYCBPAP (ENSTGUG00000008998)	RSAD1 (ENSTGUG00000008992)	ENSTGUG00000008987
Medium ground finch	MODERN SPECIES	73															UTP18 (ENSGFOG00000004702)	MBTD1 (ENSGFOG00000004674) ##22	NME2 (ENSGFOG00000004666)	NME1 (ENSGFOG00000004644)	SPAG9 (ENSGFOG00000004567)	TOB1 (ENSGFOG00000004550)	WFIKKN2 (ENSGFOG00000004542)	ANKRD40CL (ENSGFOG00000004534)	LUC7L3 (ENSGFOG00000004518)	ANKRD40 (ENSGFOG00000004495)	ENSGFOG00000004461	CACNA1G (ENSGFOG00000004394)	ENSGFOG00000004380	SPATA20 (ENSGFOG00000004278)	EPN3 (ENSGFOG00000004250)	MYCBPAP (ENSGFOG00000004221)	ENSGFOG00000004211
Neognathae_c	ANCESTRAL SPECIES	23	ENSGT00390000001390.a.b	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Golden eagle	MODERN SPECIES	21	TRIM25 (ENSACCG00020005683)	ENSACCG00020005667	DGKE (ENSACCG00020005649)	C17orf67 (ENSACCG00020005633)	NOG (ENSACCG00020005619)	ENSACCG00020005607	PCTP (ENSACCG00020005592)	TMEM100 (ENSACCG00020005583)	MMD (ENSACCG00020005564)	HLF (ENSACCG00020005547)	STXBP4 (ENSACCG00020005510)	COX11 (ENSACCG00020005477)	TOM1L1 (ENSACCG00020005465)	CA10 (ENSACCG00020005443)	UTP18 (ENSACCG00020005420)	MBTD1 (ENSACCG00020005392) ##22	NME2 (ENSACCG00020005377)	NME1 (ENSACCG00020005360)	SPAG9 (ENSACCG00020005302)	TOB1 (ENSACCG00020005261)	WFIKKN2 (ENSACCG00020005255)	ENSACCG00020005248	LUC7L3 (ENSACCG00020005230)	ANKRD40 (ENSACCG00020005210)	ENSACCG00020005186	CACNA1G (ENSACCG00020004362)	SPATA20 (ENSACCG00020002817)	EPN3 (ENSACCG00020002784)	MYCBPAP (ENSACCG00020002752)	ENSACCG00020002724	ENSACCG00020002707
Kakapo	MODERN SPECIES	8	C17orf67 (ENSSHBG00005020951)	NOG (ENSSHBG00005020946)	ENSSHBG00005020942	PCTP (ENSSHBG00005020937)	TMEM100 (ENSSHBG00005020932)	ENSSHBG00005020929	SMIM36 (ENSSHBG00005020926)	MMD (ENSSHBG00005020920)	HLF (ENSSHBG00005020918)	STXBP4 (ENSSHBG00005020911)	COX11 (ENSSHBG00005020906)	ENSSHBG00005020899	ENSSHBG00005020892	CA10 (ENSSHBG00005020885)	UTP18 (ENSSHBG00005020881)	MBTD1 (ENSSHBG00005020871) ##22	NME2 (ENSSHBG00005020860)	NME1 (ENSSHBG00005020856)	SPAG9 (ENSSHBG00005020837)	TOB1 (ENSSHBG00005020815)	WFIKKN2 (ENSSHBG00005020812)	ENSSHBG00005020802	LUC7L3 (ENSSHBG00005020788)	ANKRD40 (ENSSHBG00005020774)	ENSSHBG00005017306	ENSSHBG00005016717	CACNA1G (ENSSHBG00005012072)	SPATA20 (ENSSHBG00005010955)	EPN3 (ENSSHBG00005010837)	MYCBPAP (ENSSHBG00005010779)	RSAD1 (ENSSHBG00005001038)
Galloanserae	ANCESTRAL SPECIES	19	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Anatidae	ANCESTRAL SPECIES	18	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Duck	MODERN SPECIES	9	C17orf67 (ENSAPLG00000022833)	NOG (ENSAPLG00000001105)	ENSAPLG00000004739	PCTP (ENSAPLG00000004610)	TMEM100 (ENSAPLG00000001097)	ENSAPLG00000023014	MMD (ENSAPLG00000004393)	HLF (ENSAPLG00000004386)	STXBP4 (ENSAPLG00000004179)	COX11 (ENSAPLG00000019353)	TOM1L1 (ENSAPLG00000003778)	ENSAPLG00000000972	ENSAPLG00000022944	CA10 (ENSAPLG00000003762)	UTP18 (ENSAPLG00000003482)	MBTD1 (ENSAPLG00000002996) ##22	NME2 (ENSAPLG00000030083)	NME1 (ENSAPLG00000020737)	SPAG9 (ENSAPLG00000015555)	TOB1 (ENSAPLG00000000946)	WFIKKN2 (ENSAPLG00000015552)	ENSAPLG00000015535	LUC7L3 (ENSAPLG00000015263)	ANKRD40 (ENSAPLG00000015126)	ENSAPLG00000013703	CACNA1G (ENSAPLG00000015833)	EPN3 (ENSAPLG00000025709)	MYCBPAP (ENSAPLG00000003268)	RSAD1 (ENSAPLG00000031173)	ACSF2 (ENSAPLG00000003799)	ENSAPLG00000004246
Pink-footed goose	MODERN SPECIES	34					PCTP (ENSABRG00000006321)	TMEM100 (ENSABRG00000006507)	SMIM36 (ENSABRG00000006511)	MMD (ENSABRG00000006513)	HLF (ENSABRG00000006518)	STXBP4 (ENSABRG00000006539)	COX11 (ENSABRG00000006623)	TOM1L1 (ENSABRG00000006633)	ENSABRG00000006704	CA10 (ENSABRG00000006739)	UTP18 (ENSABRG00000006761)	MBTD1 (ENSABRG00000006772) ##22	NME2 (ENSABRG00000006800)	NME1 (ENSABRG00000006818)	SPAG9 (ENSABRG00000007064)	TOB1 (ENSABRG00000012283)	WFIKKN2 (ENSABRG00000012284)	ANKRD40CL (ENSABRG00000012298)	ANKRD40 (ENSABRG00000012310)	LUC7L3 (ENSABRG00000012313)	ENSABRG00000012320	CACNA1G (ENSABRG00000012621)	SPATA20 (ENSABRG00000015503)	EPN3 (ENSABRG00000015518)	MYCBPAP (ENSABRG00000015525)	ACSF2 (ENSABRG00000015535)	ENSABRG00000015551
Phasianidae	ANCESTRAL SPECIES	18	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213.z	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867.f	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Japanese quail	MODERN SPECIES	9	TRIM25 (ENSCJPG00005021401)	DGKE (ENSCJPG00005021402)	C17orf67 (ENSCJPG00005021403)	NOG (ENSCJPG00005021404)	ENSCJPG00005021405	PCTP (ENSCJPG00005021406)	TMEM100 (ENSCJPG00005021407)	MMD (ENSCJPG00005021408)	HLF (ENSCJPG00005021409)	STXBP4 (ENSCJPG00005021410)	COX11 (ENSCJPG00005021411)	TOM1L1 (ENSCJPG00005021412)	ENSCJPG00005021414	CA10 (ENSCJPG00005021416)	UTP18 (ENSCJPG00005021417)	MBTD1 (ENSCJPG00005021418) ##22	NME2 (ENSCJPG00005021419)	NME1 (ENSCJPG00005021420)	SPAG9 (ENSCJPG00005021421)	TOB1 (ENSCJPG00005021438)	WFIKKN2 (ENSCJPG00005021439)	ENSCJPG00005021440	LUC7L3 (ENSCJPG00005021441)	ANKRD40 (ENSCJPG00005021444)	ENSCJPG00005021451	CACNA1G (ENSCJPG00005021465)	EPN3 (ENSCJPG00005021525)	MYCBPAP (ENSCJPG00005021526)	ACSF2 (ENSCJPG00005021527)	ENSCJPG00005021529	LRRC59 (ENSCJPG00005021530)
Phasianidae_b	ANCESTRAL SPECIES	25	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213.z	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867.f	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000161826.C
Chicken	MODERN SPECIES	9	TRIM25 (ENSGALG00010029584)	DGKE (ENSGALG00010029581)	C17orf67 (ENSGALG00010029578)	NOG (ENSGALG00010029577)	ANKFN1 (ENSGALG00010029575)	PCTP (ENSGALG00010029268)	TMEM100 (ENSGALG00010029258)	MMD (ENSGALG00010029254)	HLF (ENSGALG00010029244)	STXBP4 (ENSGALG00010029241)	COX11 (ENSGALG00010029237)	TOM1L1 (ENSGALG00010029234)	KIF2B (ENSGALG00010029949)	CA10 (ENSGALG00010029232)	UTP18 (ENSGALG00010029227)	MBTD1 (ENSGALG00010029226) ##22	NME2 (ENSGALG00010029223)	MYADML2 (ENSGALG00010029948)	NOTUM (ENSGALG00010029178)	ASPSCR1 (ENSGALG00010029177)	CENPX (ENSGALG00010029175)	LRRC45 (ENSGALG00010029172)	RAC3 (ENSGALG00010029165)	DCXR (ENSGALG00010029170)	RFNG (ENSGALG00010029168)	GPS1 (ENSGALG00010030102)	DUS1L (ENSGALG00010029160)	FASN (ENSGALG00010029895)	ENSGALG00010029879	SLC16A3 (ENSGALG00010029864)	CSNK1D (ENSGALG00010029859)
Turkey	MODERN SPECIES	12	DGKE (ENSMGAG00000008277)	C17orf67 (ENSMGAG00000008303)	NOG (ENSMGAG00000015423)	ANKFN1 (ENSMGAG00000008338)	PCTP (ENSMGAG00000008361)	TMEM100 (ENSMGAG00000021065)	SMIM36 (ENSMGAG00000017788)	MMD (ENSMGAG00000019227)	HLF (ENSMGAG00000016500)	STXBP4 (ENSMGAG00000008400)	COX11 (ENSMGAG00000019367)	TOM1L1 (ENSMGAG00000008425)	ENSMGAG00000015425	CA10 (ENSMGAG00000008447)	ENSMGAG00000008456	MBTD1 (ENSMGAG00000008493) ##22	NME1 (ENSMGAG00000008528)	SPAG9 (ENSMGAG00000008549)	TOB1 (ENSMGAG00000008642)	WFIKKN2 (ENSMGAG00000008648)	ANKRD40CL (ENSMGAG00000021544)	LUC7L3 (ENSMGAG00000008655)	ANKRD40 (ENSMGAG00000008693)	ENSMGAG00000008701	CACNA1G (ENSMGAG00000008773)	SPATA20 (ENSMGAG00000008988)	EPN3 (ENSMGAG00000009015)	MYCBPAP (ENSMGAG00000009042)	ACSF2 (ENSMGAG00000009074)	ENSMGAG00000019219	ENSMGAG00000009108
African ostrich	MODERN SPECIES	761	DGKE (ENSSCUG00000011536)	C17orf67 (ENSSCUG00000011535)	NOG (ENSSCUG00000011534)	ANKFN1 (ENSSCUG00000011533)	PCTP (ENSSCUG00000011532)	TMEM100 (ENSSCUG00000011531)	SMIM36 (ENSSCUG00000011530)	MMD (ENSSCUG00000011528)	HLF (ENSSCUG00000011527)	STXBP4 (ENSSCUG00000011525)	COX11 (ENSSCUG00000011523)	TOM1L1 (ENSSCUG00000011521)	ENSSCUG00000011518	CA10 (ENSSCUG00000011512)	ENSSCUG00000011509	MBTD1 (ENSSCUG00000011507) ##22	NME2 (ENSSCUG00000011506)	NME1 (ENSSCUG00000011504)	SPAG9 (ENSSCUG00000011495)	TOB1 (ENSSCUG00000011487)	WFIKKN2 (ENSSCUG00000011486)	ENSSCUG00000011483	LUC7L3 (ENSSCUG00000011480)	ANKRD40 (ENSSCUG00000011478)	ENSSCUG00000011460	CACNA1G (ENSSCUG00000011446)	SPATA20 (ENSSCUG00000011442)	ENSSCUG00000011440	MYCBPAP (ENSSCUG00000011439)	ENSSCUG00000011435	ACSF2 (ENSSCUG00000011430)
Australian saltwater crocodile	MODERN SPECIES	47	DGKE (ENSCPRG00005002113)	C17orf67 (ENSCPRG00005002118)	NOG (ENSCPRG00005002123)	ENSCPRG00005002125	PCTP (ENSCPRG00005002133)	TMEM100 (ENSCPRG00005002148)	MMD (ENSCPRG00005002159)	HLF (ENSCPRG00005002161)	STXBP4 (ENSCPRG00005002170)	COX11 (ENSCPRG00005002196)	ENSCPRG00005002207	ENSCPRG00005002210	ENSCPRG00005002214	CA10 (ENSCPRG00005002222)	UTP18 (ENSCPRG00005002230)	MBTD1 (ENSCPRG00005002236) ##22	ENSCPRG00005002251	ENSCPRG00005002257	SPAG9 (ENSCPRG00005002285)	TOB1 (ENSCPRG00005002344)	WFIKKN2 (ENSCPRG00005002347)	LUC7L3 (ENSCPRG00005002351)	ANKRD40 (ENSCPRG00005002355)	ENSCPRG00005002364	ENSCPRG00005002395	SPATA20 (ENSCPRG00005002403)	EPN3 (ENSCPRG00005002422)	MYCBPAP (ENSCPRG00005002427)	RSAD1 (ENSCPRG00005002439)	ACSF2 (ENSCPRG00005002449)	ENSCPRG00005002459
Cryptodira	ANCESTRAL SPECIES	21	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Testudinoidea	ANCESTRAL SPECIES	14	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830
Emydidae	ANCESTRAL SPECIES	17	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
painted turtle	MODERN SPECIES	2409	TCP1 (ENSCPBG00000004064)	MRPL18 (ENSCPBG00000004059)	PNLDC1 (ENSCPBG00000004050)	IGF2R (ENSCPBG00000002366)	ENSCPBG00000001937	ENSCPBG00000001916	SLC22A3 (ENSCPBG00000001892)	ENSCPBG00000001033	MAP3K4 (ENSCPBG00000000806)	AGPAT4 (ENSCPBG00000000721)	ENSCPBG00000000680	ENSCPBG00000000631	ENSCPBG00000000618	CA10 (ENSCPBG00000000583)	UTP18 (ENSCPBG00000000512)	MBTD1 (ENSCPBG00000000400) ##22	NME2 (ENSCPBG00000000369)	NME1 (ENSCPBG00000000359)	SPAG9 (ENSCPBG00000000241)	TOB1 (ENSCPBG00000028205)	WFIKKN2 (ENSCPBG00000028204)	ENSCPBG00000028203	LUC7L3 (ENSCPBG00000028202)	ANKRD40 (ENSCPBG00000028201)	ENSCPBG00000028200	CACNA1G (ENSCPBG00000028199)	EPN3 (ENSCPBG00000028187)	MYCBPAP (ENSCPBG00000028186)	RSAD1 (ENSCPBG00000028185)	ENSCPBG00000028183	ACSF2 (ENSCPBG00000028182)
Three-toed box turtle	MODERN SPECIES	90	DGKE (ENSTMTG00000008766)	C17orf67 (ENSTMTG00000008779)	NOG (ENSTMTG00000008786)	ENSTMTG00000008793	PCTP (ENSTMTG00000008821)	TMEM100 (ENSTMTG00000008838)	SMIM36 (ENSTMTG00000008844)	MMD (ENSTMTG00000008851)	HLF (ENSTMTG00000008866)	STXBP4 (ENSTMTG00000008895)	COX11 (ENSTMTG00000008981)	TOM1L1 (ENSTMTG00000009032)	ENSTMTG00000009060	CA10 (ENSTMTG00000009083)	UTP18 (ENSTMTG00000009146)	MBTD1 (ENSTMTG00000009173) ##22	NME2 (ENSTMTG00000009247)	SPAG9 (ENSTMTG00000009280)	TOB1 (ENSTMTG00000009343)	WFIKKN2 (ENSTMTG00000009358)	ANKRD40 (ENSTMTG00000009386)	LUC7L3 (ENSTMTG00000009419)	ENSTMTG00000010103	CACNA1G (ENSTMTG00000016104)	SPATA20 (ENSTMTG00000016198)	EPN3 (ENSTMTG00000016237)	MYCBPAP (ENSTMTG00000016259)	RSAD1 (ENSTMTG00000016383)	ACSF2 (ENSTMTG00000016405)	CHAD (ENSTMTG00000016449) ##23	LRRC59 (ENSTMTG00000016466)
Testudinidae	ANCESTRAL SPECIES	18	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000163071	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00980000198588	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000165325	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000154464.a ##23
Abingdon island giant tortoise	MODERN SPECIES	1081								TCF21 (ENSCABG00000012770)	TBPL1 (ENSCABG00000012768)	SLC2A12 (ENSCABG00000012734)	SGK1 (ENSCABG00000012729)	ENSCABG00000012728	ALDH8A1 (ENSCABG00000012726)	HBS1L (ENSCABG00000012723)	UTP18 (ENSCABG00000012721)	MBTD1 (ENSCABG00000012718) ##22	NME2 (ENSCABG00000012717)	NME1 (ENSCABG00000012711)	SPAG9 (ENSCABG00000011978)	TOB1 (ENSCABG00000011959)	WFIKKN2 (ENSCABG00000011957)	ENSCABG00000011955	LUC7L3 (ENSCABG00000011953)	ANKRD40 (ENSCABG00000011949)	ENSCABG00000011947	ENSCABG00000011946	ENSCABG00000011943	ENSCABG00000011941	SPATA20 (ENSCABG00000011933)	EPN3 (ENSCABG00000011931)	MYCBPAP (ENSCABG00000011928)
Goode s thornscrub tortoise	MODERN SPECIES	6	DGKE (ENSGEVG00005012884)	C17orf67 (ENSGEVG00005012845)	NOG (ENSGEVG00005012827)	ENSGEVG00005012745	PCTP (ENSGEVG00005012563)	TMEM100 (ENSGEVG00005012533)	SMIM36 (ENSGEVG00005012519)	MMD (ENSGEVG00005012449)	HLF (ENSGEVG00005012421)	STXBP4 (ENSGEVG00005012358)	COX11 (ENSGEVG00005012328)	TOM1L1 (ENSGEVG00005012295)	ENSGEVG00005012226	CA10 (ENSGEVG00005012125)	UTP18 (ENSGEVG00005012080)	MBTD1 (ENSGEVG00005012008) ##22	NME2 (ENSGEVG00005011975)	NME1 (ENSGEVG00005011956)	ENSGEVG00005011850	ENSGEVG00005011805	TOB1 (ENSGEVG00005011778)	WFIKKN2 (ENSGEVG00005011742)	ENSGEVG00005011701	LUC7L3 (ENSGEVG00005011664)	ANKRD40 (ENSGEVG00005011650)	ENSGEVG00005011596	ENSGEVG00005011529	SPATA20 (ENSGEVG00005011465)	EPN3 (ENSGEVG00005011378)	MYCBPAP (ENSGEVG00005010488)	RSAD1 (ENSGEVG00005010381)
Chinese turtle	MODERN SPECIES	1213	DGKE (ENSPSIG00000007437)	C17orf67 (ENSPSIG00000007171)	NOG (ENSPSIG00000001914)	ENSPSIG00000007025	ANKFN1 (ENSPSIG00000017061)	PCTP (ENSPSIG00000016941)	TMEM100 (ENSPSIG00000001911)	MMD (ENSPSIG00000016516)	HLF (ENSPSIG00000016356)	STXBP4 (ENSPSIG00000016103)	COX11 (ENSPSIG00000015982)	TOM1L1 (ENSPSIG00000015190)	ENSPSIG00000015121	CA10 (ENSPSIG00000014709)	ENSPSIG00000014449	MBTD1 (ENSPSIG00000014082) ##22	ENSPSIG00000013988	SPAG9 (ENSPSIG00000013074)	TOB1 (ENSPSIG00000001910)	WFIKKN2 (ENSPSIG00000013070)	ANKRD40CL (ENSPSIG00000013002)	LUC7L3 (ENSPSIG00000012888)	ANKRD40 (ENSPSIG00000012830)	ENSPSIG00000011887	CACNA1G (ENSPSIG00000009148)	SPATA20 (ENSPSIG00000008376)	EPN3 (ENSPSIG00000008046)	MYCBPAP (ENSPSIG00000007837)	RSAD1 (ENSPSIG00000007809)	ENSPSIG00000007780	ACSF2 (ENSPSIG00000007036)
Lepidosauria	ANCESTRAL SPECIES	26															ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Episquamata	ANCESTRAL SPECIES	4	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00960000189630	ENSGT00510000046608.A	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Laterata	ANCESTRAL SPECIES	1	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00510000046608.A	ENSGT00960000189630	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT01000000219980	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000005982	LRRC45 (ENSPMRG00000005990)	RAC3 (ENSPMRG00000005998)	DCXR (ENSPMRG00000006003)	ENSPMRG00000006018	RFNG (ENSPMRG00000006035)	GPS1 (ENSPMRG00000006095)	ENSPMRG00000006107	DUS1L (ENSPMRG00000006116)	FASN (ENSPMRG00000006130)	CCDC57 (ENSPMRG00000006157)	ENSPMRG00000006168	SLC16A3 (ENSPMRG00000006172)	CSNK1D (ENSPMRG00000006184)	UTP18 (ENSPMRG00000006203)	MBTD1 (ENSPMRG00000006220) ##22	NME2 (ENSPMRG00000006231)	NME1 (ENSPMRG00000006239)	SPAG9 (ENSPMRG00000006286)	TOB1 (ENSPMRG00000006501)	WFIKKN2 (ENSPMRG00000006505)	ENSPMRG00000006509	LUC7L3 (ENSPMRG00000006518)	ANKRD40 (ENSPMRG00000006530)	ENSPMRG00000007314	CACNA1G (ENSPMRG00000011373)	ENSPMRG00000013641	SPATA20 (ENSPMRG00000013645)	EPN3 (ENSPMRG00000013656)	MYCBPAP (ENSPMRG00000013666)	ENSPMRG00000013699
Argentine black and white tegu	MODERN SPECIES	1	NOTUM (ENSSMRG00000023345)	ASPSCR1 (ENSSMRG00000023343)	CENPX (ENSSMRG00000023342)	LRRC45 (ENSSMRG00000023341)	RAC3 (ENSSMRG00000023340)	DCXR (ENSSMRG00000023339)	ENSSMRG00000023338	RFNG (ENSSMRG00000023337)	GPS1 (ENSSMRG00000023336)	DUS1L (ENSSMRG00000023335)	FASN (ENSSMRG00000023334)	ENSSMRG00000023333	SLC16A3 (ENSSMRG00000023332)	CSNK1D (ENSSMRG00000023331)	UTP18 (ENSSMRG00000023330)	MBTD1 (ENSSMRG00000023329) ##22	NME2 (ENSSMRG00000023328)	NME1 (ENSSMRG00000023327)	ENSSMRG00000023326	SPAG9 (ENSSMRG00000023325)	TOB1 (ENSSMRG00000023324)	WFIKKN2 (ENSSMRG00000023323)	ENSSMRG00000023322	LUC7L3 (ENSSMRG00000023321)	ANKRD40 (ENSSMRG00000023320)	ENSSMRG00000023287	CACNA1G (ENSSMRG00000023251)	ENSSMRG00000023250	SPATA20 (ENSSMRG00000023247)	EPN3 (ENSSMRG00000023246)	MYCBPAP (ENSSMRG00000023245)
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00960000189630	ENSGT00510000046608.A	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000161569	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00960000189630	ENSGT00510000046608.A	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00960000186809	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000161826.C
Elapidae_a	ANCESTRAL SPECIES	18	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00510000046608.A	ENSGT00960000189630	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000161826.C
Acanthophiinae	ANCESTRAL SPECIES	18	ENSGT00390000015892	ENSGT00940000156853	ENSGT00390000002725	ENSGT00940000154003.B	ENSGT00940000153500.a.b	ENSGT00940000154873	ENSGT00940000160801	ENSGT00510000046608.A	ENSGT00960000189630	ENSGT00550000075089	ENSGT00940000157276.d	ENSGT00940000153251.b.b	ENSGT00940000158181	ENSGT00940000153536.a.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00940000162213	ENSGT00940000153496.a.b	ENSGT00940000154208.c.b	ENSGT00940000160624	ENSGT00390000007792.l	ENSGT00950000183213.a.b	ENSGT00390000007792.k	ENSGT00940000163867	ENSGT00940000159664	ENSGT00390000004836	ENSGT00940000158217	ENSGT00640000091565	ENSGT00390000011216	ENSGT00940000156830	ENSGT00940000161826.C
Eastern brown snake	MODERN SPECIES	17	MYADML2 (ENSPTXG00000003301)	NOTUM (ENSPTXG00000003302)	ASPSCR1 (ENSPTXG00000003305)	LRRC45 (ENSPTXG00000003307)	RAC3 (ENSPTXG00000003313)	DCXR (ENSPTXG00000003314)	RFNG (ENSPTXG00000003317)	GPS1 (ENSPTXG00000003319)	ENSPTXG00000003321	DUS1L (ENSPTXG00000003322)	FASN (ENSPTXG00000003337)	CCDC57 (ENSPTXG00000003448)	SLC16A3 (ENSPTXG00000003450)	CSNK1D (ENSPTXG00000003453)	UTP18 (ENSPTXG00000003454)	MBTD1 (ENSPTXG00000003455) ##22	NME1 (ENSPTXG00000003458)	SPAG9 (ENSPTXG00000003460)	TOB1 (ENSPTXG00000003463)	WFIKKN2 (ENSPTXG00000003466)	ENSPTXG00000003469	LUC7L3 (ENSPTXG00000003472)	ANKRD40 (ENSPTXG00000003479)	ENSPTXG00000003482	ENSPTXG00000003488	SPATA20 (ENSPTXG00000003490)	EPN3 (ENSPTXG00000003495)	RSAD1 (ENSPTXG00000003496)	ACSF2 (ENSPTXG00000003498)	ENSPTXG00000003505	LRRC59 (ENSPTXG00000003509)
Mainland tiger snake	MODERN SPECIES	19	MYADML2 (ENSNSUG00000010646)	NOTUM (ENSNSUG00000010647)	ENSNSUG00000010653	ENSNSUG00000010654	CENPX (ENSNSUG00000010655)	LRRC45 (ENSNSUG00000010657)	RAC3 (ENSNSUG00000010663)	DCXR (ENSNSUG00000010688)	RFNG (ENSNSUG00000010689)	GPS1 (ENSNSUG00000010699)	DUS1L (ENSNSUG00000010701)	FASN (ENSNSUG00000010866)	SLC16A3 (ENSNSUG00000012888)	CSNK1D (ENSNSUG00000012889)	ENSNSUG00000012890	MBTD1 (ENSNSUG00000012894) ##22	NME1 (ENSNSUG00000012962)	SPAG9 (ENSNSUG00000012963)	ENSNSUG00000013181	TOB1 (ENSNSUG00000013182)	WFIKKN2 (ENSNSUG00000013183)	ENSNSUG00000013184	LUC7L3 (ENSNSUG00000013186)	ANKRD40 (ENSNSUG00000013187)	ENSNSUG00000013188	ENSNSUG00000013189	ENSNSUG00000013190	SPATA20 (ENSNSUG00000013191)	EPN3 (ENSNSUG00000013250)	MYCBPAP (ENSNSUG00000013253)	RSAD1 (ENSNSUG00000013257)
Indian cobra	MODERN SPECIES	1	ENSNNAG00000012257	CENPX (ENSNNAG00000012219)	LRRC45 (ENSNNAG00000012156)	RAC3 (ENSNNAG00000012134)	DCXR (ENSNNAG00000012074)	RFNG (ENSNNAG00000011894)	ENSNNAG00000011874	GPS1 (ENSNNAG00000011829)	DUS1L (ENSNNAG00000011747)	FASN (ENSNNAG00000010596)	ENSNNAG00000010394	CCDC57 (ENSNNAG00000010284)	SLC16A3 (ENSNNAG00000010260)	CSNK1D (ENSNNAG00000010070)	UTP18 (ENSNNAG00000010013)	MBTD1 (ENSNNAG00000009948) ##22	NME1 (ENSNNAG00000009920)	ENSNNAG00000009901	ENSNNAG00000009825	TOB1 (ENSNNAG00000009809)	WFIKKN2 (ENSNNAG00000009776)	ENSNNAG00000009667	LUC7L3 (ENSNNAG00000009617)	ANKRD40 (ENSNNAG00000009598)	ENSNNAG00000008999	CACNA1G (ENSNNAG00000008584)	ENSNNAG00000008539	SPATA20 (ENSNNAG00000008427)	EPN3 (ENSNNAG00000008397)	MYCBPAP (ENSNNAG00000007875)	RSAD1 (ENSNNAG00000007799)
Lizard	MODERN SPECIES	1	ENSACAG00000045280	LRRC45 (ENSACAG00000010215)	RAC3 (ENSACAG00000010192)	DCXR (ENSACAG00000010147)	ENSACAG00000010142	RFNG (ENSACAG00000010094)	ENSACAG00000042193	GPS1 (ENSACAG00000009996)	DUS1L (ENSACAG00000009945)	FASN (ENSACAG00000009470)	ENSACAG00000037735	CCDC57 (ENSACAG00000002600)	SLC16A3 (ENSACAG00000002565)	CSNK1D (ENSACAG00000002494)	UTP18 (ENSACAG00000002427)	MBTD1 (ENSACAG00000002284) ##22	NME2 (ENSACAG00000002188)	NME1 (ENSACAG00000035641)	SPAG9 (ENSACAG00000001705)	WFIKKN2 (ENSACAG00000001679)	ENSACAG00000040249	LUC7L3 (ENSACAG00000001586)	ANKRD40 (ENSACAG00000001562)	ENSACAG00000035577	ENSACAG00000001396	CACNA1G (ENSACAG00000004254)	SPATA20 (ENSACAG00000005044)	EPN3 (ENSACAG00000005123)	MYCBPAP (ENSACAG00000005166)	RSAD1 (ENSACAG00000005171)	chad (ENSACAG00000037999)
tuatara	MODERN SPECIES	1429	TK1 (ENSSPUG00000011273)	SYNGR2 (ENSSPUG00000011258)	TMC6 (ENSSPUG00000011230)	ENSSPUG00000011216	ARL16 (ENSSPUG00000011195)	HGS (ENSSPUG00000011094)	ENSSPUG00000011067	MRPL12 (ENSSPUG00000011062)	SLC25A10 (ENSSPUG00000011030)	GCGR (ENSSPUG00000011005)	MCRIP1 (ENSSPUG00000010978)	PPP1R27 (ENSSPUG00000010964)	P4HB (ENSSPUG00000010934)	ARHGDIA (ENSSPUG00000010913)	UTP18 (ENSSPUG00000010862)	MBTD1 (ENSSPUG00000010840) ##22	NME2 (ENSSPUG00000010826)	NME1 (ENSSPUG00000010785)	ENSSPUG00000010757	ENSSPUG00000010733	ENSSPUG00000010712	TOB1 (ENSSPUG00000010699)	ENSSPUG00000010689	LUC7L3 (ENSSPUG00000010664)	ANKRD40 (ENSSPUG00000010652)	ENSSPUG00000010603	ENSSPUG00000010581	CACNA1G (ENSSPUG00000010451)	SPATA20 (ENSSPUG00000010375)	EPN3 (ENSSPUG00000010350)	ENSSPUG00000010335
Anura	ANCESTRAL SPECIES	154		ENSGT00390000001390.a.b	ENSGT00940000158604	ENSGT00390000006555	ENSGT00390000006009.a.a.a	ENSGT00940000159856	ENSGT00940000156843	ENSGT00940000154322.A	ENSGT00940000157428	ENSGT00940000156555	ENSGT00390000002226	ENSGT00390000007512	ENSGT00940000160240	ENSGT00940000155223.b	ENSGT00440000033919	ENSGT00940000153840.a.a ##22	ENSGT00390000000976	ENSGT00940000153536.a.b	ENSGT00940000158181	ENSGT00940000153251.b.b	ENSGT00940000157276.d	ENSGT00550000075089	ENSGT01070000253744.a.a.a.b.a.b	ENSGT00510000046608.A	ENSGT00940000160801
Frog	MODERN SPECIES	1	ENSXETG00000047143	nog (ENSXETG00000043161)	ANKFN1 (ENSXETG00000031668)	ENSXETG00000045905	tmem100 (ENSXETG00000041828)	ENSXETG00000043677	ENSXETG00000036631	cdk5rap1 (ENSXETG00000004314)	ENSXETG00000043949	mmd (ENSXETG00000004315)	tfap2c (ENSXETG00000004316)	stxbp4 (ENSXETG00000027901)	tom1l1 (ENSXETG00000004317)	ca10 (ENSXETG00000001296)	utp18 (ENSXETG00000001293)	mbtd1 (ENSXETG00000001291) ##22	trappc5 (ENSXETG00000045163)	csnk1d (ENSXETG00000001288)	ENSXETG00000044610	ENSXETG00000048285	ENSXETG00000040524	gaa (ENSXETG00000001281)	ENSXETG00000041534	ENSXETG00000046967	rbfox3 (ENSXETG00000020236)	ENSXETG00000047944	engase (ENSXETG00000020214)	cant1 (ENSXETG00000020212)	ENSXETG00000043009	timp2 (ENSXETG00000020206)	ENSXETG00000048575
Leishan spiny toad	MODERN SPECIES	3	ENSLLEG00000030946	RPN2 (ENSLLEG00000030952)	ENSLLEG00000030974	SRC (ENSLLEG00000030984)	BLCAP (ENSLLEG00000030998)	ENSLLEG00000031001	CRLF3 (ENSLLEG00000031005)	SUZ12 (ENSLLEG00000031014)	UTP6 (ENSLLEG00000031023)	RAB11FIP4 (ENSLLEG00000031035)	SCPEP1 (ENSLLEG00000031043)	ENSLLEG00000031048	TRIM25 (ENSLLEG00000031053)	ENSLLEG00000031055	UTP18 (ENSLLEG00000031057)	MBTD1 (ENSLLEG00000013860) ##22	TRAPPC5 (ENSLLEG00000014151)	CSNK1D (ENSLLEG00000014293)	SLC16A3 (ENSLLEG00000016116)	CCDC57 (ENSLLEG00000016227)	FASN (ENSLLEG00000016893)	RFNG (ENSLLEG00000020616)	GPS1 (ENSLLEG00000020706)	ENSLLEG00000021061	DUS1L (ENSLLEG00000021106)	DCXR (ENSLLEG00000021335)	RAC3 (ENSLLEG00000021407)	LRRC45 (ENSLLEG00000021617)	ASPSCR1 (ENSLLEG00000021997)	NOTUM (ENSLLEG00000022427)	MYADML2 (ENSLLEG00000022540)
Coelacanth	MODERN SPECIES	899															SPAG9 (ENSLACG00000002172)	MBTD1 (ENSLACG00000004850) ##22	NME1 (ENSLACG00000005745)	UTP18 (ENSLACG00000005884)	CA10 (ENSLACG00000009476)
Elephant shark	MODERN SPECIES	1727							ca10a (ENSCMIG00000016628)	ENSCMIG00000016489	luc7l3 (ENSCMIG00000016390)	ANKRD40 (ENSCMIG00000016388)	WFIKKN2 (ENSCMIG00000016387)	tob1b (ENSCMIG00000016382)	ENSCMIG00000016380	spag9a (ENSCMIG00000016167)	ENSCMIG00000016095	MBTD1 (ENSCMIG00000016089) ##22	nme2a (ENSCMIG00000016081)	UTP18 (ENSCMIG00000016079)	ENSCMIG00000016076	ENSCMIG00000016075	ENSCMIG00000016072
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000153840.b ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000153840.b ##22
Hagfish	MODERN SPECIES	995	ENSEBUG00000015332	ENSEBUG00000005092	mettl14 (ENSEBUG00000006504)	ENSEBUG00000007946	ENSEBUG00000015125	ENSEBUG00000002568	nudc (ENSEBUG00000001914)	ENSEBUG00000009860	ENSEBUG00000014722	ENSEBUG00000004361	ENSEBUG00000012912	tmem135 (ENSEBUG00000002175)	ENSEBUG00000005440	me3 (ENSEBUG00000001502)	ENSEBUG00000008868	ENSEBUG00000007330 ##22	ENSEBUG00000000930	ENSEBUG00000007598	ENSEBUG00000003582	ENSEBUG00000014670	ENSEBUG00000010743	ENSEBUG00000015846	ENSEBUG00000001819	ENSEBUG00000012854	ENSEBUG00000006860	ENSEBUG00000013629	ENSEBUG00000011425	ENSEBUG00000003489	ENSEBUG00000002968	ENSEBUG00000004222	ENSEBUG00000001215