Gnathostomata	ANCESTRAL SPECIES	152					ENSGT00730000111100 #33	ENSGT00390000002918.a.b #32	ENSGT00390000000022.b #31	ENSGT00390000004383 #30	ENSGT00940000154892 #29	ENSGT00390000018518 #28	ENSGT00940000154208.d #27	ENSGT00940000156578 #26	ENSGT00390000018542.a #25	ENSGT00440000039203 #24	ENSGT00940000161826.C	ENSGT00940000153840.a.b #22	ENSGT00940000155497 #20	ENSGT00940000155618 #19	ENSGT00940000153657.A #18	ENSGT00390000001347 #16
Euteleostomi	ANCESTRAL SPECIES	192										ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00390000001347 #16	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34
Sarcopterygii	ANCESTRAL SPECIES	213											ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34
Tetrapoda	ANCESTRAL SPECIES	76	ENSGT01030000234887	ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00920000149129 #15	ENSGT00940000165010	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Amniota	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Mammalia	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Theria	ANCESTRAL SPECIES	2	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00550000074840.z ##35	ENSGT00900000141218 #36
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Primates	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Simiiformes	ANCESTRAL SPECIES	27	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a ##16	ENSGT00390000001347.vb.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Catarrhini	ANCESTRAL SPECIES	22	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a ##16	ENSGT00390000001347.vb.a.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cercopithecidae	ANCESTRAL SPECIES	24	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b #16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cercopithecinae	ANCESTRAL SPECIES	21	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b #16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000154846.b.k.a.a #21	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Vervet Monkey	MODERN SPECIES	10	ENTHD1 (ENSCSAG00000006073) #7	GRAP2 (ENSCSAG00000006067) #8	FAM83F (ENSCSAG00000006058) #9	TNRC6B (ENSCSAG00000006021) #10	ADSL (ENSCSAG00000006001) #11	SGSM3 (ENSCSAG00000005995) #12	MRTFA (ENSCSAG00000005969) #13	MCHR1 (ENSCSAG00000005961) #14	SLC25A17 (ENSCSAG00000005926) #15	ENSCSAG00000005882 #16	ENSCSAG00000019281 #17	XPNPEP3 (ENSCSAG00000005861) #18	RBX1 (ENSCSAG00000005849) #19	EP300 (ENSCSAG00000005846) #20	ENSCSAG00000019282 #21	L3MBTL2 (ENSCSAG00000005839) #22	CHADL (ENSCSAG00000005836) #23	RANGAP1 (ENSCSAG00000005830) #24	ZC3H7B (ENSCSAG00000005824) #25	TEF (ENSCSAG00000005816) #26	TOB2 (ENSCSAG00000019283) #27	PHF5A (ENSCSAG00000005811) #28	ACO2 (ENSCSAG00000005807) #29	POLR3H (ENSCSAG00000005798) #30	CSDC2 (ENSCSAG00000005794) #31	PMM1 (ENSCSAG00000005792) #32	DESI1 (ENSCSAG00000005787) #33	XRCC6 (ENSCSAG00000005784) #34	SNU13 (ENSCSAG00000005776) #35	ENSCSAG00000005774 #36	MEI1 (ENSCSAG00000005763) #37
Cercopithecinae_a	ANCESTRAL SPECIES	20	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b #16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cercopithecinae_b	ANCESTRAL SPECIES	22	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.a.b #16	ENSGT00940000163470	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00510000046986.n.b	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36
Olive baboon	MODERN SPECIES	7	CACNA1I (ENSPANG00000009111)	ENTHD1 (ENSPANG00000035473) #7	GRAP2 (ENSPANG00000020770) #8	FAM83F (ENSPANG00000016392) #9	TNRC6B (ENSPANG00000009271) #10	SGSM3 (ENSPANG00000009270) #12	MRTFA (ENSPANG00000024733) #13	MCHR1 (ENSPANG00000051238) #14	ENSPANG00000008275 #15	ENSPANG00000015759 #16	DNAJB7 (ENSPANG00000050760)	XPNPEP3 (ENSPANG00000007027) #18	RBX1 (ENSPANG00000046052) #19	ENSPANG00000038187 #21	EP300 (ENSPANG00000015108) #20	L3MBTL2 (ENSPANG00000001305) #22	CHADL (ENSPANG00000001306) #23	RANGAP1 (ENSPANG00000019687) #24	ZC3H7B (ENSPANG00000019690) #25	TEF (ENSPANG00000037689) #26	ENSPANG00000047887	TOB2 (ENSPANG00000009655) #27	PHF5A (ENSPANG00000011337) #28	ENSPANG00000015758 #30	ACO2 (ENSPANG00000024107) #29	PMM1 (ENSPANG00000048796) #32	DESI1 (ENSPANG00000045717) #33	XRCC6 (ENSPANG00000001252) #34	SNU13 (ENSPANG00000038561) #35	ENSPANG00000045378 #36	MEI1 (ENSPANG00000005138) #37
Cercopithecinae_d	ANCESTRAL SPECIES	17	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000015537.ab	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.b #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00510000046986.n.b	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37
Drill	MODERN SPECIES	751	ENTHD1 (ENSMLEG00000038046) #7	GRAP2 (ENSMLEG00000038063) #8	FAM83F (ENSMLEG00000034781) #9	TNRC6B (ENSMLEG00000041780) #10	ADSL (ENSMLEG00000039322) #11	SGSM3 (ENSMLEG00000039368) #12	MRTFA (ENSMLEG00000036191) #13	MCHR1 (ENSMLEG00000028467) #14	ENSMLEG00000036117	ENSMLEG00000023192 #15	ENSMLEG00000022771	ENSMLEG00000030298 ##16	XPNPEP3 (ENSMLEG00000014699) #18	ENSMLEG00000044153 #19	EP300 (ENSMLEG00000039670) #20	L3MBTL2 (ENSMLEG00000021840) #22	CHADL (ENSMLEG00000037296) #23	RANGAP1 (ENSMLEG00000030778) #24	ZC3H7B (ENSMLEG00000037209) #25	TEF (ENSMLEG00000033784) #26	ENSMLEG00000004379	TOB2 (ENSMLEG00000011426) #27	PHF5A (ENSMLEG00000037662) #28	ACO2 (ENSMLEG00000031603) #29	POLR3H (ENSMLEG00000024568) #30	CSDC2 (ENSMLEG00000034612) #31	PMM1 (ENSMLEG00000030064) #32	DESI1 (ENSMLEG00000043217) #33	XRCC6 (ENSMLEG00000019869) #34	SNU13 (ENSMLEG00000042136) #35	MEI1 (ENSMLEG00000033254) #37
Sooty mangabey	MODERN SPECIES	103	GRAP2 (ENSCATG00000030826) #8	FAM83F (ENSCATG00000035519) #9	TNRC6B (ENSCATG00000029291) #10	ADSL (ENSCATG00000039632) #11	SGSM3 (ENSCATG00000037436) #12	MRTFA (ENSCATG00000044298) #13	MCHR1 (ENSCATG00000025929) #14	ENSCATG00000043953 #15	ENSCATG00000013183	ENSCATG00000041540 #16	XPNPEP3 (ENSCATG00000035961) #18	RBX1 (ENSCATG00000036288) #19	ENSCATG00000033630	ENSCATG00000044606 #21	EP300 (ENSCATG00000043641) #20	L3MBTL2 (ENSCATG00000037314) #22	CHADL (ENSCATG00000040617) #23	RANGAP1 (ENSCATG00000001985) #24	ZC3H7B (ENSCATG00000037774) #25	TEF (ENSCATG00000034168) #26	ENSCATG00000022368	TOB2 (ENSCATG00000021391) #27	PHF5A (ENSCATG00000012251) #28	ACO2 (ENSCATG00000030437) #29	POLR3H (ENSCATG00000018316) #30	CSDC2 (ENSCATG00000035356) #31	PMM1 (ENSCATG00000041928) #32	DESI1 (ENSCATG00000000926) #33	XRCC6 (ENSCATG00000042366) #34	SNU13 (ENSCATG00000038628) #35	MEI1 (ENSCATG00000039577) #37
Macaca	ANCESTRAL SPECIES	20	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.b.a.a ##16	ENSGT00940000163470	ENSGT00390000001347.vb.a.a.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Pig-tailed macaque	MODERN SPECIES	329	ENTHD1 (ENSMNEG00000043784) #7	GRAP2 (ENSMNEG00000044139) #8	FAM83F (ENSMNEG00000033076) #9	TNRC6B (ENSMNEG00000042745) #10	ADSL (ENSMNEG00000036502) #11	SGSM3 (ENSMNEG00000031385) #12	MRTFA (ENSMNEG00000031219) #13	MCHR1 (ENSMNEG00000030314) #14	SLC25A17 (ENSMNEG00000038810) #15	ENSMNEG00000033494	ENSMNEG00000013783 ##17	ENSMNEG00000031373 #16	XPNPEP3 (ENSMNEG00000028410) #18	ENSMNEG00000038287 #19	EP300 (ENSMNEG00000043056) #20	L3MBTL2 (ENSMNEG00000044141) #22	CHADL (ENSMNEG00000036193) #23	RANGAP1 (ENSMNEG00000036291) #24	ZC3H7B (ENSMNEG00000036730) #25	TEF (ENSMNEG00000020616) #26	ENSMNEG00000006468	ENSMNEG00000010834	TOB2 (ENSMNEG00000020529) #27	PHF5A (ENSMNEG00000045104) #28	ACO2 (ENSMNEG00000044522) #29	POLR3H (ENSMNEG00000022264) #30	CSDC2 (ENSMNEG00000027703) #31	PMM1 (ENSMNEG00000021815) #32	DESI1 (ENSMNEG00000030194) #33	XRCC6 (ENSMNEG00000035076) #34	ENSMNEG00000033195 ##35
Macaca_a	ANCESTRAL SPECIES	20	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00390000001347.vb.a.b.a.a ##16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618.cb.a.a #19	ENSGT00940000154846.b.k.a.a #21	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Crab-eating macaque	MODERN SPECIES	1	FAM83F (ENSMFAG00000002020) #9	ENSMFAG00000048080	ENSMFAG00000049257	TNRC6B (ENSMFAG00000003862) #10	ADSL (ENSMFAG00000039307) #11	SGSM3 (ENSMFAG00000032498) #12	MRTFA (ENSMFAG00000046410) #13	MCHR1 (ENSMFAG00000045345) #14	SLC25A17 (ENSMFAG00000042964) #15	ST13 (ENSMFAG00000035459) ##16	DNAJB7 (ENSMFAG00000051541)	XPNPEP3 (ENSMFAG00000040751) #18	ENSMFAG00000040152 #19	ENSMFAG00000059794 #21	EP300 (ENSMFAG00000039593) #20	L3MBTL2 (ENSMFAG00000037650) #22	RANGAP1 (ENSMFAG00000040386) #24	ZC3H7B (ENSMFAG00000037965) #25	TEF (ENSMFAG00000033476) #26	TOB2 (ENSMFAG00000019801) #27	PHF5A (ENSMFAG00000003129) #28	ENSMFAG00000047419	POLR3H (ENSMFAG00000001153) #30	ACO2 (ENSMFAG00000043571) #29	CSDC2 (ENSMFAG00000060068) #31	PMM1 (ENSMFAG00000034090) #32	ENSMFAG00000007408	ENSMFAG00000034617	ENSMFAG00000056431	XRCC6 (ENSMFAG00000003352) #34	SNU13 (ENSMFAG00000031096) #35
Rhesus	MODERN SPECIES	1	FAM83F (ENSMMUG00000017166) #9	TNRC6B (ENSMMUG00000021345) #10	ADSL (ENSMMUG00000005341) #11	SGSM3 (ENSMMUG00000008135) #12	ENSMMUG00000050905	MRTFA (ENSMMUG00000020411) #13	MCHR1 (ENSMMUG00000017371) #14	SLC25A17 (ENSMMUG00000008106) #15	ST13 (ENSMMUG00000019118) #16	DNAJB7 (ENSMMUG00000065211)	XPNPEP3 (ENSMMUG00000004067) #18	RBX1 (ENSMMUG00000047625) #19	ENSMMUG00000058288	ENSMMUG00000040029 #21	EP300 (ENSMMUG00000000893) #20	L3MBTL2 (ENSMMUG00000014164) #22	CHADL (ENSMMUG00000014165) #23	RANGAP1 (ENSMMUG00000014166) #24	ZC3H7B (ENSMMUG00000005219) #25	TEF (ENSMMUG00000005221) #26	TOB2 (ENSMMUG00000002554) #27	PHF5A (ENSMMUG00000065330) #28	POLR3H (ENSMMUG00000001459) #30	ACO2 (ENSMMUG00000001454) #29	CSDC2 (ENSMMUG00000062477) #31	PMM1 (ENSMMUG00000001853) #32	DESI1 (ENSMMUG00000050219) #33	XRCC6 (ENSMMUG00000001856) #34	SNU13 (ENSMMUG00000042546) #35	ENSMMUG00000007290 #36	MEI1 (ENSMMUG00000031012) #37
Rhinopithecus	ANCESTRAL SPECIES	3	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.e #15	ENSGT00910000146844	ENSGT00390000001347.vb.a.a.a ##16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000154846.b.k.a.c #21	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b.f #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339
Golden snub-nosed monkey	MODERN SPECIES	575			GRAP2 (ENSRROG00000044364) #8	FAM83F (ENSRROG00000031286) #9	TNRC6B (ENSRROG00000031135) #10	ADSL (ENSRROG00000029868) #11	SGSM3 (ENSRROG00000036226) #12	MRTFA (ENSRROG00000042362) #13	MCHR1 (ENSRROG00000031131) #14	ENSRROG00000030379 #15	ENSRROG00000030895	ENSRROG00000033331 ##16	XPNPEP3 (ENSRROG00000044414) #18	RBX1 (ENSRROG00000029154) #19	EP300 (ENSRROG00000037756) #20	L3MBTL2 (ENSRROG00000036118) #22	CHADL (ENSRROG00000039682) #23	RANGAP1 (ENSRROG00000045722) #24	ZC3H7B (ENSRROG00000033899) #25	TEF (ENSRROG00000045709) #26	PHF5A (ENSRROG00000038952) #28	ACO2 (ENSRROG00000005066) #29	POLR3H (ENSRROG00000033728) #30	CSDC2 (ENSRROG00000042848) #31	PMM1 (ENSRROG00000027395) #32	DESI1 (ENSRROG00000039283) #33	ENSRROG00000030297 #34	SNU13 (ENSRROG00000042542) #35	MEI1 (ENSRROG00000043986) #37	CCDC134 (ENSRROG00000030513)	SREBF2 (ENSRROG00000032435)
Black snub-nosed monkey	MODERN SPECIES	311					ADSL (ENSRBIG00000033554) #11	SGSM3 (ENSRBIG00000010806) #12	MRTFA (ENSRBIG00000036684) #13	MCHR1 (ENSRBIG00000038995) #14	ENSRBIG00000040439 #15	ENSRBIG00000037095 ##16	ENSRBIG00000042698 #17	XPNPEP3 (ENSRBIG00000043347) #18	RBX1 (ENSRBIG00000043855) #19	EP300 (ENSRBIG00000040546) #20	ENSRBIG00000032400 #21	L3MBTL2 (ENSRBIG00000029454) #22	CHADL (ENSRBIG00000044046) #23	RANGAP1 (ENSRBIG00000040255) #24	ZC3H7B (ENSRBIG00000013333) #25	TEF (ENSRBIG00000037619) #26	ENSRBIG00000030586 #28	ACO2 (ENSRBIG00000035174) #29	POLR3H (ENSRBIG00000040089) #30	CSDC2 (ENSRBIG00000039404) #31	PMM1 (ENSRBIG00000033292) #32	DESI1 (ENSRBIG00000035678) #33	ENSRBIG00000039794 #34
Hominoidea	ANCESTRAL SPECIES	22	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Hominidae	ANCESTRAL SPECIES	21	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	21	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.g #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Homo/Pan group	ANCESTRAL SPECIES	20	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.g #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Pan	ANCESTRAL SPECIES	23	ENSGT00940000160998 #9	ENSGT00950000182878.b.a.d.b.f.a	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000015537.ab	ENSGT00390000001347.vb.a.b.a.d ##16	ENSGT00910000146844.a.a	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00910000148068	ENSGT00390000018518 #28	ENSGT00940000154892.f #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.g #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Chimpanzee	MODERN SPECIES	13	FAM83F (ENSPTRG00000014405) #9	TNRC6B (ENSPTRG00000047826) #10	ADSL (ENSPTRG00000014407) #11	SGSM3 (ENSPTRG00000014408) #12	MRTFA (ENSPTRG00000014409) #13	MCHR1 (ENSPTRG00000014411) #14	SLC25A17 (ENSPTRG00000014412) #15	ENSPTRG00000049457	ST13 (ENSPTRG00000044653) ##16	ENSPTRG00000047105	XPNPEP3 (ENSPTRG00000014415) #18	DNAJB7 (ENSPTRG00000014416)	RBX1 (ENSPTRG00000014417) #19	ENSPTRG00000041697	EP300 (ENSPTRG00000014418) #20	L3MBTL2 (ENSPTRG00000014419) #22	CHADL (ENSPTRG00000014420) #23	RANGAP1 (ENSPTRG00000023600) #24	ZC3H7B (ENSPTRG00000014424) #25	TEF (ENSPTRG00000014425) #26	ENSPTRG00000043552	PHF5A (ENSPTRG00000014427) #28	ACO2 (ENSPTRG00000014428) #29	POLR3H (ENSPTRG00000051865) #30	CSDC2 (ENSPTRG00000044110) #31	PMM1 (ENSPTRG00000014432) #32	DESI1 (ENSPTRG00000014433) #33	XRCC6 (ENSPTRG00000022548) #34	SNU13 (ENSPTRG00000014435) #35	ENSPTRG00000041505 #36	MEI1 (ENSPTRG00000014436) #37
Bonobo	MODERN SPECIES	13	ENSPPAG00000012346	TNRC6B (ENSPPAG00000028514) #10	ADSL (ENSPPAG00000029448) #11	SGSM3 (ENSPPAG00000031514) #12	MRTFA (ENSPPAG00000020762) #13	MCHR1 (ENSPPAG00000030244) #14	SLC25A17 (ENSPPAG00000038151) #15	ENSPPAG00000036400	ST13 (ENSPPAG00000003665) ##16	ENSPPAG00000034722	XPNPEP3 (ENSPPAG00000037292) #18	DNAJB7 (ENSPPAG00000025760)	RBX1 (ENSPPAG00000031663) #19	ENSPPAG00000035289	EP300 (ENSPPAG00000032679) #20	L3MBTL2 (ENSPPAG00000040643) #22	ENSPPAG00000040223 #23	RANGAP1 (ENSPPAG00000037749) #24	ZC3H7B (ENSPPAG00000034228) #25	TEF (ENSPPAG00000035585) #26	ENSPPAG00000032847	PHF5A (ENSPPAG00000008422) #28	ACO2 (ENSPPAG00000019653) #29	POLR3H (ENSPPAG00000031000) #30	CSDC2 (ENSPPAG00000032112) #31	PMM1 (ENSPPAG00000034355) #32	DESI1 (ENSPPAG00000035138) #33	XRCC6 (ENSPPAG00000037167) #34	SNU13 (ENSPPAG00000026299) #35	ENSPPAG00000028172 #36	MEI1 (ENSPPAG00000029081) #37
Human	MODERN SPECIES	14	ENTHD1 (ENSG00000176177) #7	GRAP2 (ENSG00000100351) #8	TMA7B (ENSG00000225528)	FAM83F (ENSG00000133477) #9	TNRC6B (ENSG00000100354) #10	ADSL (ENSG00000239900) #11	SGSM3 (ENSG00000100359) #12	MRTFA (ENSG00000196588) #13	MCHR1 (ENSG00000128285) #14	SLC25A17 (ENSG00000100372) #15	ST13 (ENSG00000100380) ##16	XPNPEP3 (ENSG00000196236) #18	DNAJB7 (ENSG00000172404)	RBX1 (ENSG00000100387) #19	EP300 (ENSG00000100393) #20	L3MBTL2 (ENSG00000100395) #22	CHADL (ENSG00000100399) #23	RANGAP1 (ENSG00000100401) #24	ZC3H7B (ENSG00000100403) #25	TEF (ENSG00000167074) #26	TOB2 (ENSG00000183864) #27	ACO2 (ENSG00000100412) #29	PHF5A (ENSG00000100410) #28	POLR3H (ENSG00000100413) #30	CSDC2 (ENSG00000172346) #31	PMM1 (ENSG00000100417) #32	DESI1 (ENSG00000100418) #33	XRCC6 (ENSG00000196419) #34	SNU13 (ENSG00000100138) #35	MEI1 (ENSG00000167077) #37	CCDC134 (ENSG00000100147)
Gorilla	MODERN SPECIES	13	FAM83F (ENSGGOG00000006871) #9	ENSGGOG00000037611	TNRC6B (ENSGGOG00000008444) #10	ENSGGOG00000015110 #11	SGSM3 (ENSGGOG00000015169) #12	MRTFA (ENSGGOG00000015180) #13	SLC25A17 (ENSGGOG00000022781) #15	ENSGGOG00000023835	ENSGGOG00000043660	ST13 (ENSGGOG00000026747) ##16	ENSGGOG00000042004	DNAJB7 (ENSGGOG00000003936)	ENSGGOG00000003524 #19	ENSGGOG00000025031	EP300 (ENSGGOG00000008201) #20	L3MBTL2 (ENSGGOG00000013451) #22	CHADL (ENSGGOG00000013462) #23	RANGAP1 (ENSGGOG00000013473) #24	ZC3H7B (ENSGGOG00000014138) #25	TEF (ENSGGOG00000043695) #26	PHF5A (ENSGGOG00000001104) #28	ACO2 (ENSGGOG00000001107) #29	POLR3H (ENSGGOG00000038191) #30	CSDC2 (ENSGGOG00000037916) #31	PMM1 (ENSGGOG00000025969) #32	DESI1 (ENSGGOG00000015877) #33	XRCC6 (ENSGGOG00000015885) #34	SNU13 (ENSGGOG00000015898) #35	MEI1 (ENSGGOG00000004400) #37	CCDC134 (ENSGGOG00000012055)	SREBF2 (ENSGGOG00000012065)
Orangutan	MODERN SPECIES	13	RPS19BP1 (ENSPPYG00000011843)	CACNA1I (ENSPPYG00000011844)	ENTHD1 (ENSPPYG00000011845) #7	GRAP2 (ENSPPYG00000011846) #8	FAM83F (ENSPPYG00000011847) #9	TNRC6B (ENSPPYG00000011849) #10	SGSM3 (ENSPPYG00000011851) #12	MRTFA (ENSPPYG00000011852) #13	ENSPPYG00000035357	MCHR1 (ENSPPYG00000031606) #14	SLC25A17 (ENSPPYG00000011856) #15	ST13 (ENSPPYG00000011858) ##16	XPNPEP3 (ENSPPYG00000011859) #18	RBX1 (ENSPPYG00000011861) #19	EP300 (ENSPPYG00000011862) #20	L3MBTL2 (ENSPPYG00000011863) #22	CHADL (ENSPPYG00000011864) #23	ENSPPYG00000040861	RANGAP1 (ENSPPYG00000011865) #24	ZC3H7B (ENSPPYG00000011866) #25	TEF (ENSPPYG00000011867) #26	TOB2 (ENSPPYG00000011869) #27	ENSPPYG00000011870 #28	ACO2 (ENSPPYG00000011871) #29	ENSPPYG00000011872 #30	CSDC2 (ENSPPYG00000036694) #31	ENSPPYG00000011875 #32	XRCC6 (ENSPPYG00000011876) #34	ENSPPYG00000033456 #35	ENSPPYG00000033524 #36	ENSPPYG00000031869 #36
Gibbon	MODERN SPECIES	22	CACNA1I (ENSNLEG00000015272)	ENTHD1 (ENSNLEG00000015289) #7	GRAP2 (ENSNLEG00000015291) #8	FAM83F (ENSNLEG00000015307) #9	TNRC6B (ENSNLEG00000015311) #10	ADSL (ENSNLEG00000015322) #11	SGSM3 (ENSNLEG00000034921) #12	MRTFA (ENSNLEG00000015359) #13	ENSNLEG00000015367 #14	SLC25A17 (ENSNLEG00000034097) #15	ST13 (ENSNLEG00000015378) ##16	DNAJB7 (ENSNLEG00000015434)	XPNPEP3 (ENSNLEG00000029969) #18	RBX1 (ENSNLEG00000028919) #19	EP300 (ENSNLEG00000015440) #20	L3MBTL2 (ENSNLEG00000015454) #22	CHADL (ENSNLEG00000015463) #23	RANGAP1 (ENSNLEG00000015464) #24	ZC3H7B (ENSNLEG00000015470) #25	TEF (ENSNLEG00000015473) #26	ENSNLEG00000015481 #28	ACO2 (ENSNLEG00000015482) #29	POLR3H (ENSNLEG00000015536) #30	ENSNLEG00000015551 #31	PMM1 (ENSNLEG00000015555) #32	DESI1 (ENSNLEG00000015592) #33	XRCC6 (ENSNLEG00000015610) #34	SNU13 (ENSNLEG00000027284) #35	ENSNLEG00000030585	MEI1 (ENSNLEG00000015634) #37	CCDC134 (ENSNLEG00000015642)
Platyrrhini	ANCESTRAL SPECIES	30	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.`b #19	ENSGT00940000163470	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518.w.a #28	ENSGT00940000154208.d #27	ENSGT00390000018518.x #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37
Cebidae	ANCESTRAL SPECIES	31	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.`b #19	ENSGT00940000163470	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518.w.a #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.a.a.b ##34	ENSGT00940000153239.B.j.b #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37
Cebidae_a	ANCESTRAL SPECIES	40	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.c #15	ENSGT00390000001347.vb.b.b ##16	ENSGT00940000153657.A #18	ENSGT00940000155618.ab #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203.a #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00390000018518.w.a #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.j.a.a.b ##34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339
Bolivian squirrel monkey	MODERN SPECIES	94	RPS19BP1 (ENSSBOG00000016421)	CACNA1I (ENSSBOG00000034043)	ENTHD1 (ENSSBOG00000028101) #7	GRAP2 (ENSSBOG00000028271) #8	FAM83F (ENSSBOG00000024462) #9	TNRC6B (ENSSBOG00000029743) #10	ADSL (ENSSBOG00000030059) #11	SGSM3 (ENSSBOG00000027400) #12	MRTFA (ENSSBOG00000019487) #13	MCHR1 (ENSSBOG00000036058) #14	SLC25A17 (ENSSBOG00000022585) #15	ENSSBOG00000029053 ##16	XPNPEP3 (ENSSBOG00000034216) #18	RBX1 (ENSSBOG00000023412) #19	EP300 (ENSSBOG00000027132) #20	L3MBTL2 (ENSSBOG00000028967) #22	CHADL (ENSSBOG00000032007) #23	ENSSBOG00000022447 #24	ZC3H7B (ENSSBOG00000034962) #25	TEF (ENSSBOG00000024378) #26	ENSSBOG00000015322	ENSSBOG00000025096 #28	ENSSBOG00000029050 #29	POLR3H (ENSSBOG00000020652) #30	CSDC2 (ENSSBOG00000035590) #31	PMM1 (ENSSBOG00000035346) #32	DESI1 (ENSSBOG00000023969) #33	ENSSBOG00000024724 ##34	ENSSBOG00000024134 ##35	MEI1 (ENSSBOG00000026823) #37	CCDC134 (ENSSBOG00000030156)
Capuchin	MODERN SPECIES	435											ENSCCAG00000027368	XPNPEP3 (ENSCCAG00000024069) #18	RBX1 (ENSCCAG00000037465) #19	EP300 (ENSCCAG00000036735) #20	ENSCCAG00000035552	L3MBTL2 (ENSCCAG00000001271) #22	CHADL (ENSCCAG00000031153) #23	ENSCCAG00000024962 #24	ZC3H7B (ENSCCAG00000027974) #25	TEF (ENSCCAG00000033688) #26	ENSCCAG00000037141 #28	ACO2 (ENSCCAG00000028378) #29	POLR3H (ENSCCAG00000025802) #30	CSDC2 (ENSCCAG00000029849) #31	PMM1 (ENSCCAG00000034441) #32	DESI1 (ENSCCAG00000037020) #33	ENSCCAG00000030468 ##34	ENSCCAG00000031213 #35	MEI1 (ENSCCAG00000033076) #37	CCDC134 (ENSCCAG00000019608)	SREBF2 (ENSCCAG00000025566)
Marmoset	MODERN SPECIES		CACNA1I (ENSCJAG00000044108)	ENTHD1 (ENSCJAG00000002696) #7	GRAP2 (ENSCJAG00000056000) #8	FAM83F (ENSCJAG00000002721) #9	TNRC6B (ENSCJAG00000002732) #10	ADSL (ENSCJAG00000002764) #11	SGSM3 (ENSCJAG00000002827) #12	MRTFA (ENSCJAG00000002850) #13	MCHR1 (ENSCJAG00000002884) #14	SLC25A17 (ENSCJAG00000004636) #15	ENSCJAG00000004644 ##16	XPNPEP3 (ENSCJAG00000004718) #18	DNAJB7 (ENSCJAG00000004759)	RBX1 (ENSCJAG00000004763) #19	EP300 (ENSCJAG00000004770) #20	L3MBTL2 (ENSCJAG00000004817) #22	CHADL (ENSCJAG00000043984) #23	RANGAP1 (ENSCJAG00000004844) #24	ZC3H7B (ENSCJAG00000004889) #25	TEF (ENSCJAG00000004977) #26	TOB2 (ENSCJAG00000038649) #27	PHF5A (ENSCJAG00000004999) #28	POLR3H (ENSCJAG00000005072) #30	ENSCJAG00000075226	ENSCJAG00000010682	SMARCB1 (ENSCJAG00000046335)	MMP11 (ENSCJAG00000010798)	CHCHD10 (ENSCJAG00000010824)	C22orf15 (ENSCJAG00000010833)	VPREB3 (ENSCJAG00000010848)	ZNF70 (ENSCJAG00000038628)
Mas night monkey	MODERN SPECIES	1154																L3MBTL2 (ENSANAG00000029131) #22	ENSANAG00000022120 #23	ENSANAG00000025645 #23	ENSANAG00000032854 #24	ZC3H7B (ENSANAG00000026268) #25	TEF (ENSANAG00000034941) #26	ENSANAG00000028988 #28	ACO2 (ENSANAG00000029281) #29	POLR3H (ENSANAG00000025122) #30	CSDC2 (ENSANAG00000020803) #31	PMM1 (ENSANAG00000027683) #32	DESI1 (ENSANAG00000033964) #33	XRCC6 (ENSANAG00000018684) #34	SNU13 (ENSANAG00000023772) #35	MEI1 (ENSANAG00000030252) #37	CCDC134 (ENSANAG00000030858)
Tarsier	MODERN SPECIES	6440															EP300 (ENSTSYG00000001247) #20	L3MBTL2 (ENSTSYG00000009799) #22	CHADL (ENSTSYG00000026762) #23
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164
Lemuriformes_a	ANCESTRAL SPECIES	38	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164
Coquerels sifaka	MODERN SPECIES	131	RPS19BP1 (ENSPCOG00000013622)	CACNA1I (ENSPCOG00000019621)	ENTHD1 (ENSPCOG00000024799) #7	GRAP2 (ENSPCOG00000027684) #8	FAM83F (ENSPCOG00000016351) #9	TNRC6B (ENSPCOG00000020790) #10	ADSL (ENSPCOG00000014684) #11	SGSM3 (ENSPCOG00000014433) #12	MRTFA (ENSPCOG00000018452) #13	MCHR1 (ENSPCOG00000008960) #14	SLC25A17 (ENSPCOG00000024201) #15	ENSPCOG00000024193	ENSPCOG00000024901 #18	RBX1 (ENSPCOG00000016863) #19	EP300 (ENSPCOG00000021644) #20	L3MBTL2 (ENSPCOG00000024552) #22	CHADL (ENSPCOG00000028654) #23	RANGAP1 (ENSPCOG00000028740) #24	ZC3H7B (ENSPCOG00000024031) #25	TEF (ENSPCOG00000013129) #26	PHF5A (ENSPCOG00000014332) #28	ACO2 (ENSPCOG00000017488) #29	POLR3H (ENSPCOG00000013751) #30	CSDC2 (ENSPCOG00000024484) #31	ENSPCOG00000020073 #32	DESI1 (ENSPCOG00000026824) #33	XRCC6 (ENSPCOG00000027338) #34	ENSPCOG00000025033 #35	MEI1 (ENSPCOG00000015175) #37	CCDC134 (ENSPCOG00000025774)	SREBF2 (ENSPCOG00000023461)
Greater bamboo lemur	MODERN SPECIES	231	CACNA1I (ENSPSMG00000003753)	ENTHD1 (ENSPSMG00000003712) #7	GRAP2 (ENSPSMG00000003705) #8	FAM83F (ENSPSMG00000003697) #9	TNRC6B (ENSPSMG00000003634) #10	ADSL (ENSPSMG00000003312) #11	SGSM3 (ENSPSMG00000002912) #12	MRTFA (ENSPSMG00000002488) #13	MCHR1 (ENSPSMG00000002312) #14	SLC25A17 (ENSPSMG00000002228) #15	ST13 (ENSPSMG00000002173) #16	DNAJB7 (ENSPSMG00000002153)	XPNPEP3 (ENSPSMG00000002127) #18	RBX1 (ENSPSMG00000002112) #19	EP300 (ENSPSMG00000001992) #20	L3MBTL2 (ENSPSMG00000001837) #22	CHADL (ENSPSMG00000001766) #23	RANGAP1 (ENSPSMG00000001639) #24	ZC3H7B (ENSPSMG00000001526) #25	TEF (ENSPSMG00000001506) #26	TOB2 (ENSPSMG00000001464) #27	PHF5A (ENSPSMG00000001452) #28	ACO2 (ENSPSMG00000001419) #29	POLR3H (ENSPSMG00000001287) #30	CSDC2 (ENSPSMG00000001223) #31	PMM1 (ENSPSMG00000001200) #32	DESI1 (ENSPSMG00000001171) #33	XRCC6 (ENSPSMG00000000818) #34	SNU13 (ENSPSMG00000000630) #35	MEI1 (ENSPSMG00000000596) #37	CCDC134 (ENSPSMG00000000532)
Mouse lemur	MODERN SPECIES	29	CACNA1I (ENSMICG00000002043)	ENTHD1 (ENSMICG00000039602) #7	GRAP2 (ENSMICG00000016121) #8	FAM83F (ENSMICG00000016129) #9	TNRC6B (ENSMICG00000014056) #10	ADSL (ENSMICG00000014085) #11	SGSM3 (ENSMICG00000005645) #12	MRTFA (ENSMICG00000005671) #13	MCHR1 (ENSMICG00000008864) #14	SLC25A17 (ENSMICG00000008868) #15	ENSMICG00000042936 #16	XPNPEP3 (ENSMICG00000008881) #18	ENSMICG00000041690	RBX1 (ENSMICG00000034593) #19	EP300 (ENSMICG00000013864) #20	L3MBTL2 (ENSMICG00000002619) #22	CHADL (ENSMICG00000037353) #23	RANGAP1 (ENSMICG00000013450) #24	ZC3H7B (ENSMICG00000013471) #25	ENSMICG00000045077 #26	TOB2 (ENSMICG00000044468) #27	PHF5A (ENSMICG00000013520) #28	ACO2 (ENSMICG00000013529) #29	POLR3H (ENSMICG00000013546) #30	CSDC2 (ENSMICG00000041795) #31	PMM1 (ENSMICG00000005983) #32	DESI1 (ENSMICG00000045578) #33	XRCC6 (ENSMICG00000005993) #34	ENSMICG00000007014	SNU13 (ENSMICG00000013557) #35	ENSMICG00000045689 #36
Bushbaby	MODERN SPECIES	122	CACNA1I (ENSOGAG00000002655)	ENTHD1 (ENSOGAG00000002664) #7	GRAP2 (ENSOGAG00000002666) #8	FAM83F (ENSOGAG00000030522) #9	TNRC6B (ENSOGAG00000011096) #10	ADSL (ENSOGAG00000015435) #11	SGSM3 (ENSOGAG00000000967) #12	MRTFA (ENSOGAG00000003217) #13	MCHR1 (ENSOGAG00000016927) #14	SLC25A17 (ENSOGAG00000016929) #15	ENSOGAG00000016932 #16	DNAJB7 (ENSOGAG00000016936)	XPNPEP3 (ENSOGAG00000030566) #18	RBX1 (ENSOGAG00000016937) #19	EP300 (ENSOGAG00000000423) #20	L3MBTL2 (ENSOGAG00000000428) #22	CHADL (ENSOGAG00000028902) #23	RANGAP1 (ENSOGAG00000008823) #24	ZC3H7B (ENSOGAG00000008827) #25	TEF (ENSOGAG00000025997) #26	TOB2 (ENSOGAG00000008831) #27	ENSOGAG00000002839 #28	ACO2 (ENSOGAG00000002845) #29	ENSOGAG00000002850 #30	CSDC2 (ENSOGAG00000002852) #31	PMM1 (ENSOGAG00000027466) #32	DESI1 (ENSOGAG00000002854) #33	XRCC6 (ENSOGAG00000008821) #34	SNU13 (ENSOGAG00000004007) #35	ENSOGAG00000026014 #36	MEI1 (ENSOGAG00000011980) #37
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00550000074840.y.b.a.a ##35
Tree shrew	MODERN SPECIES	5962																L3MBTL2 (ENSTBEG00000015918) #22	RANGAP1 (ENSTBEG00000016700) #24
Glires	ANCESTRAL SPECIES	4	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Muroidea	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.a.h ##35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Prairie vole	MODERN SPECIES	2	Gpr20 (ENSMOCG00000003252)	Ptp4a3 (ENSMOCG00000018999)	ENSMOCG00000008614	Gm6569 (ENSMOCG00000012239)	Adgrb1 (ENSMOCG00000016067)	Mroh4 (ENSMOCG00000000343)	Arc (ENSMOCG00000014212)	Jrk (ENSMOCG00000011136)	Psca (ENSMOCG00000022772)	Them6 (ENSMOCG00000022648)	Slurp1 (ENSMOCG00000019456)	Lypd2 (ENSMOCG00000018807)	Slurp2 (ENSMOCG00000005277)	Ly6d (ENSMOCG00000015686)	Ly6g6g (ENSMOCG00000013524)	L3mbtl2 (ENSMOCG00000019285) #22	Chadl (ENSMOCG00000011810) #23	Rangap1 (ENSMOCG00000015758) #24	Zc3h7b (ENSMOCG00000014855) #25	Tef (ENSMOCG00000001800) #26	Tob2 (ENSMOCG00000021112) #27	Phf5a (ENSMOCG00000015149) #28	Aco2 (ENSMOCG00000008387) #29	Polr3h (ENSMOCG00000018747) #30	Csdc2 (ENSMOCG00000017299) #31	Pmm1 (ENSMOCG00000012876) #32	Desi1 (ENSMOCG00000010048) #33	Xrcc6 (ENSMOCG00000015717) #34	4930407I10Rik (ENSMOCG00000013993) #36	Mei1 (ENSMOCG00000009514) #37	Ccdc134 (ENSMOCG00000005926)
Northern American deer mouse	MODERN SPECIES	12	Enthd1 (ENSPEMG00000008002) #7	Grap2 (ENSPEMG00000009128) #8	Fam83f (ENSPEMG00000010602) #9	Tnrc6b (ENSPEMG00000011403) #10	Adsl (ENSPEMG00000017163) #11	Sgsm3 (ENSPEMG00000011819) #12	Mrtfa (ENSPEMG00000003602) #13	Mchr1 (ENSPEMG00000027041) #14	Slc25a17 (ENSPEMG00000015903) #15	St13 (ENSPEMG00000010026) #16	Xpnpep3 (ENSPEMG00000008673) #18	Dnajb7 (ENSPEMG00000027247)	Rbx1 (ENSPEMG00000015808) #19	ENSPEMG00000029631	Ep300 (ENSPEMG00000011981) #20	L3mbtl2 (ENSPEMG00000011652) #22	Chadl (ENSPEMG00000015210) #23	Rangap1 (ENSPEMG00000013930) #24	Zc3h7b (ENSPEMG00000023990) #25	Tef (ENSPEMG00000029238) #26	Tob2 (ENSPEMG00000028595) #27	ENSPEMG00000027549 #28	Aco2 (ENSPEMG00000021158) #29	ENSPEMG00000000726 #30	Csdc2 (ENSPEMG00000026460) #31	Pmm1 (ENSPEMG00000015085) #32	ENSPEMG00000024816	ENSPEMG00000027260	ENSPEMG00000028310	Ndufb11b (ENSPEMG00000027521)	Desi1 (ENSPEMG00000024515) #33
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00940000153331.y.b.a.b	ENSGT00390000003022.t	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35
Chinese hamster chok1gshd	MODERN SPECIES	1	Cacna1i (ENSCGRG00001022652)	Enthd1 (ENSCGRG00001021361) #7	Grap2 (ENSCGRG00001021712) #8	Fam83f (ENSCGRG00001018899) #9	Tnrc6b (ENSCGRG00001020166) #10	Adsl (ENSCGRG00001017906) #11	Sgsm3 (ENSCGRG00001018846) #12	Mrtfa (ENSCGRG00001018160) #13	Mchr1 (ENSCGRG00001017287) #14	Slc25a17 (ENSCGRG00001017555) #15	ENSCGRG00001019004 #16	Xpnpep3 (ENSCGRG00001020209) #18	Dnajb7 (ENSCGRG00001010409)	Rbx1 (ENSCGRG00001022113) #19	Ep300 (ENSCGRG00001020720) #20	L3mbtl2 (ENSCGRG00001021097) #22	Chadl (ENSCGRG00001017198) #23	Rangap1 (ENSCGRG00001017379) #24	Zc3h7b (ENSCGRG00001022924) #25	Tef (ENSCGRG00001005588) #26	Tob2 (ENSCGRG00001010039) #27	Phf5a (ENSCGRG00001017936) #28	ENSCGRG00001023335 #29	Polr3h (ENSCGRG00001023556) #30	Csdc2 (ENSCGRG00001021123) #31	Pmm1 (ENSCGRG00001021685) #32	ENSCGRG00001018874	Ndufb11b (ENSCGRG00001009944)	Desi1 (ENSCGRG00001018751) #33	Xrcc6 (ENSCGRG00001019029) #34	ENSCGRG00001019169 #35
Golden Hamster	MODERN SPECIES	626	Enthd1 (ENSMAUG00000006247) #7	Grap2 (ENSMAUG00000008300) #8	Fam83f (ENSMAUG00000015744) #9	ENSMAUG00000014912	Tnrc6b (ENSMAUG00000016123) #10	Adsl (ENSMAUG00000001074) #11	Sgsm3 (ENSMAUG00000008597) #12	ENSMAUG00000022256 #13	ENSMAUG00000012578 #13	Mchr1 (ENSMAUG00000021927) #14	Slc25a17 (ENSMAUG00000017231) #15	ENSMAUG00000004356	Dnajb7 (ENSMAUG00000010726)	ENSMAUG00000010852 #19	Ep300 (ENSMAUG00000004380) #20	L3mbtl2 (ENSMAUG00000008519) #22	Rangap1 (ENSMAUG00000013685) #24	Zc3h7b (ENSMAUG00000007915) #25	Tef (ENSMAUG00000011211) #26	Tob2 (ENSMAUG00000007650) #27	Phf5a (ENSMAUG00000017124) #28	Aco2 (ENSMAUG00000007598) #29	Polr3h (ENSMAUG00000022215) #30	Csdc2 (ENSMAUG00000020821) #31	ENSMAUG00000012267	Desi1 (ENSMAUG00000020204) #33	Xrcc6 (ENSMAUG00000017340) #34	Snu13 (ENSMAUG00000010871) #35	4930407I10Rik (ENSMAUG00000020761) #36	ENSMAUG00000018190 #37	Ccdc134 (ENSMAUG00000015349)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00390000003022.t	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36
Mus	ANCESTRAL SPECIES	11	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00390000003022.t	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00390000003022.t	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00390000003022.t	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Steppe mouse	MODERN SPECIES	3124	Cacna1i (ENSMSIG00000028818)	Enthd1 (ENSMSIG00000028810) #7	Grap2 (ENSMSIG00000028802) #8	Fam83f (ENSMSIG00000028799) #9	Tnrc6b (ENSMSIG00000028673) #10	Adsl (ENSMSIG00000028638) #11	Sgsm3 (ENSMSIG00000028619) #12	Mrtfa (ENSMSIG00000028601) #13	Mchr1 (ENSMSIG00000028591) #14	Slc25a17 (ENSMSIG00000028556) #15	St13 (ENSMSIG00000028532) #16	Dnajb7 (ENSMSIG00000028531)	Xpnpep3 (ENSMSIG00000028518) #18	Rbx1 (ENSMSIG00000028515) #19	ENSMSIG00000027732 #20	L3mbtl2 (ENSMSIG00000027660) #22	Chadl (ENSMSIG00000027651) #23	Rangap1 (ENSMSIG00000027600) #24
spretus	MODERN SPECIES	6	Enthd1 (MGP_SPRETEiJ_G0020938) #7	Grap2 (MGP_SPRETEiJ_G0020939) #8	Fam83f (MGP_SPRETEiJ_G0020940) #9	Tnrc6b (MGP_SPRETEiJ_G0020941) #10	Adsl (MGP_SPRETEiJ_G0020942) #11	MGP_SPRETEiJ_G0020943 #12	MGP_SPRETEiJ_G0020944 #12	Mrtfa (MGP_SPRETEiJ_G0020945) #13	Mchr1 (MGP_SPRETEiJ_G0020946) #14	Slc25a17 (MGP_SPRETEiJ_G0020947) #15	St13 (MGP_SPRETEiJ_G0020948) #16	Xpnpep3 (MGP_SPRETEiJ_G0020949) #18	Dnajb7 (MGP_SPRETEiJ_G0020950)	Rbx1 (MGP_SPRETEiJ_G0020951) #19	Ep300 (MGP_SPRETEiJ_G0020952) #20	L3mbtl2 (MGP_SPRETEiJ_G0020953) #22	Chadl (MGP_SPRETEiJ_G0020954) #23	Rangap1 (MGP_SPRETEiJ_G0020955) #24	Zc3h7b (MGP_SPRETEiJ_G0020956) #25	Tef (MGP_SPRETEiJ_G0020957) #26	MGP_SPRETEiJ_G0020958	MGP_SPRETEiJ_G0020959	MGP_SPRETEiJ_G0020960	Tob2 (MGP_SPRETEiJ_G0020961) #27	Phf5a (MGP_SPRETEiJ_G0020962) #28	Aco2 (MGP_SPRETEiJ_G0020963) #29	Polr3h (MGP_SPRETEiJ_G0020964) #30	Csdc2 (MGP_SPRETEiJ_G0020965) #31	Pmm1 (MGP_SPRETEiJ_G0020966) #32	Xrcc6 (MGP_SPRETEiJ_G0020967) #34	Desi1 (MGP_SPRETEiJ_G0020968) #33
Mouse	MODERN SPECIES	6	Cacna1i (ENSMUSG00000022416)	Enthd1 (ENSMUSG00000050439) #7	Grap2 (ENSMUSG00000042351) #8	Fam83f (ENSMUSG00000022408) #9	Tnrc6b (ENSMUSG00000047888) #10	Adsl (ENSMUSG00000022407) #11	Sgsm3 (ENSMUSG00000042303) #12	Mrtfa (ENSMUSG00000042292) #13	Mchr1 (ENSMUSG00000050164) #14	Slc25a17 (ENSMUSG00000022404) #15	St13 (ENSMUSG00000022403) #16	Xpnpep3 (ENSMUSG00000022401) #18	Dnajb7 (ENSMUSG00000047108)	Rbx1 (ENSMUSG00000022400) #19	Ep300 (ENSMUSG00000055024) #20	L3mbtl2 (ENSMUSG00000022394) #22	Chadl (ENSMUSG00000063765) #23	Rangap1 (ENSMUSG00000022391) #24	Zc3h7b (ENSMUSG00000022390) #25	Tef (ENSMUSG00000022389) #26	Tob2 (ENSMUSG00000048546) #27	Phf5a (ENSMUSG00000061360) #28	Aco2 (ENSMUSG00000022477) #29	Polr3h (ENSMUSG00000022476) #30	Csdc2 (ENSMUSG00000042109) #31	Pmm1 (ENSMUSG00000022474) #32	Ndufb11b (ENSMUSG00000061633)	Xrcc6 (ENSMUSG00000022471) #34	Desi1 (ENSMUSG00000022472) #33	Snu13 (ENSMUSG00000063480) #35	4930407I10Rik (ENSMUSG00000075524) #36
Ryukyu mouse	MODERN SPECIES	6	Enthd1 (MGP_CAROLIEiJ_G0020040) #7	Grap2 (MGP_CAROLIEiJ_G0020041) #8	Fam83f (MGP_CAROLIEiJ_G0020042) #9	Tnrc6b (MGP_CAROLIEiJ_G0020043) #10	Adsl (MGP_CAROLIEiJ_G0020044) #11	MGP_CAROLIEiJ_G0020045 #12	MGP_CAROLIEiJ_G0020046 #12	Mrtfa (MGP_CAROLIEiJ_G0020047) #13	Mchr1 (MGP_CAROLIEiJ_G0020048) #14	Slc25a17 (MGP_CAROLIEiJ_G0020049) #15	St13 (MGP_CAROLIEiJ_G0020050) #16	MGP_CAROLIEiJ_G0020051 #18	Dnajb7 (MGP_CAROLIEiJ_G0020052)	Rbx1 (MGP_CAROLIEiJ_G0020053) #19	Ep300 (MGP_CAROLIEiJ_G0020054) #20	L3mbtl2 (MGP_CAROLIEiJ_G0020055) #22	Chadl (MGP_CAROLIEiJ_G0020056) #23	Rangap1 (MGP_CAROLIEiJ_G0020057) #24	Zc3h7b (MGP_CAROLIEiJ_G0020058) #25	Tef (MGP_CAROLIEiJ_G0020059) #26	Tob2 (MGP_CAROLIEiJ_G0020060) #27	Phf5a (MGP_CAROLIEiJ_G0020061) #28	Aco2 (MGP_CAROLIEiJ_G0020062) #29	Polr3h (MGP_CAROLIEiJ_G0020063) #30	Csdc2 (MGP_CAROLIEiJ_G0020064) #31	Pmm1 (MGP_CAROLIEiJ_G0020065) #32	Ndufb11b (MGP_CAROLIEiJ_G0020066)	Xrcc6 (MGP_CAROLIEiJ_G0020067) #34	Desi1 (MGP_CAROLIEiJ_G0020068) #33	Snu13 (MGP_CAROLIEiJ_G0020069) #35	4930407I10Rik (MGP_CAROLIEiJ_G0020070) #36
Shrew mouse	MODERN SPECIES	8	Enthd1 (MGP_PahariEiJ_G0020042) #7	Grap2 (MGP_PahariEiJ_G0020043) #8	Fam83f (MGP_PahariEiJ_G0020044) #9	Tnrc6b (MGP_PahariEiJ_G0020045) #10	Adsl (MGP_PahariEiJ_G0020046) #11	MGP_PahariEiJ_G0020047 #12	MGP_PahariEiJ_G0020048 #12	Mrtfa (MGP_PahariEiJ_G0020049) #13	Mchr1 (MGP_PahariEiJ_G0020050) #14	Slc25a17 (MGP_PahariEiJ_G0020051) #15	St13 (MGP_PahariEiJ_G0020052) #16	MGP_PahariEiJ_G0020053 #18	Dnajb7 (MGP_PahariEiJ_G0020054)	Rbx1 (MGP_PahariEiJ_G0020055) #19	Ep300 (MGP_PahariEiJ_G0020056) #20	L3mbtl2 (MGP_PahariEiJ_G0020057) #22	Chadl (MGP_PahariEiJ_G0020058) #23	Rangap1 (MGP_PahariEiJ_G0020059) #24	Zc3h7b (MGP_PahariEiJ_G0020060) #25	Tef (MGP_PahariEiJ_G0020061) #26	Tob2 (MGP_PahariEiJ_G0020062) #27	Phf5a (MGP_PahariEiJ_G0020063) #28	Aco2 (MGP_PahariEiJ_G0020064) #29	Polr3h (MGP_PahariEiJ_G0020065) #30	Csdc2 (MGP_PahariEiJ_G0020066) #31	Pmm1 (MGP_PahariEiJ_G0020067) #32	Ndufb11b (MGP_PahariEiJ_G0020068)	Xrcc6 (MGP_PahariEiJ_G0020069) #34	Desi1 (MGP_PahariEiJ_G0020070) #33	MGP_PahariEiJ_G0020071	4930407I10Rik (MGP_PahariEiJ_G0020072) #36
Rat	MODERN SPECIES	17	Fam83f (ENSRNOG00000018330) #9	Tnrc6b (ENSRNOG00000024907) #10	Rpl26-ps1 (ENSRNOG00000032777)	Adsl (ENSRNOG00000018655) #11	Srek1ip1-ps1 (ENSRNOG00000066565)	Sgsm3 (ENSRNOG00000018745) #12	Mrtfa (ENSRNOG00000018803) #13	Mchr1 (ENSRNOG00000018895) #14	Slc25a17 (ENSRNOG00000018920) #15	Xpnpep3 (ENSRNOG00000019196) #18	Dnajb7 (ENSRNOG00000019187)	Rbx1 (ENSRNOG00000058914)	ENSRNOG00000070978	Ep300 (ENSRNOG00000000190) #20	Ep300 (ENSRNOG00000065659) #20	L3mbtl2 (ENSRNOG00000024743) #22	Chadl (ENSRNOG00000024631) #23	Rangap1 (ENSRNOG00000031789) #24	Zc3h7b (ENSRNOG00000055925) #25	Tef (ENSRNOG00000019383) #26	Tob2 (ENSRNOG00000050500) #27	Phf5a (ENSRNOG00000024170) #28	Aco2 (ENSRNOG00000024128) #29	Polr3h (ENSRNOG00000004471) #30	Csdc2 (ENSRNOG00000005332) #31	Pmm1 (ENSRNOG00000005358) #32	RGD1306782 (ENSRNOG00000005572)	Desi1 (ENSRNOG00000005577) #33	Xrcc6 (ENSRNOG00000006392) #34	Snu13 (ENSRNOG00000006762) #35	LOC100362109 (ENSRNOG00000030150) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1277									Mchr1 (ENSNGAG00000019906) #14	Slc25a17 (ENSNGAG00000013608) #15	ENSNGAG00000016572 #16	Xpnpep3 (ENSNGAG00000005811) #18	ENSNGAG00000017697	Rbx1 (ENSNGAG00000016899) #19	Ep300 (ENSNGAG00000000598) #20	L3mbtl2 (ENSNGAG00000019279) #22	Chadl (ENSNGAG00000009432) #23	Rangap1 (ENSNGAG00000014916) #24	Zc3h7b (ENSNGAG00000013813) #25	Tef (ENSNGAG00000011439) #26	Tob2 (ENSNGAG00000008266) #27	Phf5a (ENSNGAG00000001430) #28	ENSNGAG00000015866 #29	Polr3h (ENSNGAG00000015009) #30	Csdc2 (ENSNGAG00000011207) #31	Pmm1 (ENSNGAG00000019009) #32	Desi1 (ENSNGAG00000015435) #33	Xrcc6 (ENSNGAG00000013750) #34	Snu13 (ENSNGAG00000012960) #35	ENSNGAG00000020669	Mei1 (ENSNGAG00000020170) #37
Lesser Egyptian jerboa	MODERN SPECIES	42	Cacna1i (ENSJJAG00000018253)	Grap2 (ENSJJAG00000014224) #8	Fam83f (ENSJJAG00000011999) #9	Tnrc6b (ENSJJAG00000015779) #10	Adsl (ENSJJAG00000016383) #11	Sgsm3 (ENSJJAG00000014792) #12	ENSJJAG00000015055 #13	ENSJJAG00000019590 #13	Mchr1 (ENSJJAG00000011702) #14	Slc25a17 (ENSJJAG00000011965) #15	ENSJJAG00000019427	ENSJJAG00000011081	Xpnpep3 (ENSJJAG00000016807) #18	Rbx1 (ENSJJAG00000021228) #19	Ep300 (ENSJJAG00000020124) #20	L3mbtl2 (ENSJJAG00000016073) #22	Chadl (ENSJJAG00000016665) #23	Rangap1 (ENSJJAG00000014253) #24	Zc3h7b (ENSJJAG00000013804) #25	Tef (ENSJJAG00000010078) #26	Tob2 (ENSJJAG00000005169) #27	Phf5a (ENSJJAG00000011261) #28	Aco2 (ENSJJAG00000014029) #29	Polr3h (ENSJJAG00000017986) #30	Csdc2 (ENSJJAG00000019289) #31	ENSJJAG00000018569 #32	Desi1 (ENSJJAG00000019532) #33	Xrcc6 (ENSJJAG00000017136) #34	Snu13 (ENSJJAG00000014378) #35	Mei1 (ENSJJAG00000016715) #37	ENSJJAG00000014856
Kangaroo rat	MODERN SPECIES	398	Rps19bp1 (ENSDORG00000026673)	Cacna1i (ENSDORG00000005080)	Enthd1 (ENSDORG00000025046) #7	Grap2 (ENSDORG00000015414) #8	Fam83f (ENSDORG00000013192) #9	Tnrc6b (ENSDORG00000003386) #10	Adsl (ENSDORG00000003388) #11	Sgsm3 (ENSDORG00000000722) #12	Mrtfa (ENSDORG00000000727) #13	Mchr1 (ENSDORG00000023475) #14	Slc25a17 (ENSDORG00000024929) #15	ENSDORG00000012775 #16	Xpnpep3 (ENSDORG00000012776) #18	Rbx1 (ENSDORG00000014908) #19	Ep300 (ENSDORG00000010258) #20	L3mbtl2 (ENSDORG00000008914) #22	Chadl (ENSDORG00000027890) #23	Rangap1 (ENSDORG00000004657) #24	Zc3h7b (ENSDORG00000013794) #25	Tef (ENSDORG00000014982) #26	Tob2 (ENSDORG00000002204) #27	Phf5a (ENSDORG00000002205) #28	Aco2 (ENSDORG00000002209) #29	Polr3h (ENSDORG00000002215) #30	Csdc2 (ENSDORG00000024736) #31	Pmm1 (ENSDORG00000011755) #32	Desi1 (ENSDORG00000011407) #33	Xrcc6 (ENSDORG00000009101) #34	Snu13 (ENSDORG00000027409) #35	ENSDORG00000029855 #37	Ccdc134 (ENSDORG00000000689)
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Marmotini	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C.c.a #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C.c.a #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Arctic ground squirrel	MODERN SPECIES	328	CACNA1I (ENSUPAG00010006656)	ENTHD1 (ENSUPAG00010006643) #7	GRAP2 (ENSUPAG00010006631) #8	FAM83F (ENSUPAG00010006625) #9	TNRC6B (ENSUPAG00010006574) #10	ENSUPAG00010006489 #11	SGSM3 (ENSUPAG00010006439) #12	MRTFA (ENSUPAG00010006297) #13	MCHR1 (ENSUPAG00010006286) #14	SLC25A17 (ENSUPAG00010006258) #15	ST13 (ENSUPAG00010006238) #16	DNAJB7 (ENSUPAG00010006227)	XPNPEP3 (ENSUPAG00010006211) #18	RBX1 (ENSUPAG00010006183) #19	EP300 (ENSUPAG00010006142) #20	L3MBTL2 (ENSUPAG00010006102) #22	CHADL (ENSUPAG00010006094) #23	RANGAP1 (ENSUPAG00010006037) #24	ZC3H7B (ENSUPAG00010006013) #25	TEF (ENSUPAG00010005998) #26	TOB2 (ENSUPAG00010005994) #27	PHF5A (ENSUPAG00010005980) #28	ACO2 (ENSUPAG00010005914) #29	POLR3H (ENSUPAG00010005893) #30	CSDC2 (ENSUPAG00010005885) #31	PMM1 (ENSUPAG00010005870) #32	DESI1 (ENSUPAG00010005863) #33	XRCC6 (ENSUPAG00010005843) #34	SNU13 (ENSUPAG00010005841) #35	ENSUPAG00010005838 #36	MEI1 (ENSUPAG00010005795) #37
Squirrel	MODERN SPECIES	92	RPS19BP1 (ENSSTOG00000008459)	CACNA1I (ENSSTOG00000025056)	ENTHD1 (ENSSTOG00000002219) #7	GRAP2 (ENSSTOG00000002229) #8	FAM83F (ENSSTOG00000023057) #9	TNRC6B (ENSSTOG00000008927) #10	ENSSTOG00000000979 #11	SGSM3 (ENSSTOG00000002927) #12	MRTFA (ENSSTOG00000002947) #13	MCHR1 (ENSSTOG00000010032) #14	SLC25A17 (ENSSTOG00000004370) #15	ENSSTOG00000003165 #16	XPNPEP3 (ENSSTOG00000003200) #18	ENSSTOG00000015580 #19	EP300 (ENSSTOG00000000722) #20	L3MBTL2 (ENSSTOG00000000242) #22	CHADL (ENSSTOG00000026534) #23	RANGAP1 (ENSSTOG00000016191) #24	ZC3H7B (ENSSTOG00000016196) #25	TEF (ENSSTOG00000019642) #26	ENSSTOG00000016206 #27	PHF5A (ENSSTOG00000016207) #28	ACO2 (ENSSTOG00000016210) #29	POLR3H (ENSSTOG00000016215) #30	CSDC2 (ENSSTOG00000020429) #31	PMM1 (ENSSTOG00000026025) #32	DESI1 (ENSSTOG00000009480) #33	XRCC6 (ENSSTOG00000009490) #34	SNU13 (ENSSTOG00000009514) #35	MEI1 (ENSSTOG00000012870) #37	CCDC134 (ENSSTOG00000012907)
Alpin marmot	MODERN SPECIES	76	TNRC6B (ENSMMMG00000004583) #10	ENSMMMG00000004472 #11	SGSM3 (ENSMMMG00000004431) #12	MRTFA (ENSMMMG00000004294) #13	MCHR1 (ENSMMMG00000004286) #14	ENSMMMG00000004275	ENSMMMG00000004266	ENSMMMG00000004251	SLC25A17 (ENSMMMG00000004230) #15	ENSMMMG00000004215	ST13 (ENSMMMG00000004184) #16	DNAJB7 (ENSMMMG00000004165)	XPNPEP3 (ENSMMMG00000004122) #18	RBX1 (ENSMMMG00000004102) #19	EP300 (ENSMMMG00000004029) #20	L3MBTL2 (ENSMMMG00000003930) #22	RANGAP1 (ENSMMMG00000003853) #24	ZC3H7B (ENSMMMG00000003824) #25	TEF (ENSMMMG00000003810) #26	TOB2 (ENSMMMG00000003805) #27	PHF5A (ENSMMMG00000003799) #28	ACO2 (ENSMMMG00000003764) #29	POLR3H (ENSMMMG00000003743) #30	CSDC2 (ENSMMMG00000003735) #31	PMM1 (ENSMMMG00000003696) #32	DESI1 (ENSMMMG00000003682) #33	ENSMMMG00000003671 #34	SNU13 (ENSMMMG00000003647) #35	ENSMMMG00000003627 #36	MEI1 (ENSMMMG00000003545) #37	CCDC134 (ENSMMMG00000003517)
Eurasian red squirrel	MODERN SPECIES	14	ENTHD1 (ENSSVLG00005017597) #7	GRAP2 (ENSSVLG00005017680) #8	FAM83F (ENSSVLG00005017783) #9	TNRC6B (ENSSVLG00005017928) #10	ENSSVLG00005018698 #11	SGSM3 (ENSSVLG00005018784) #12	MRTFA (ENSSVLG00005018986) #13	ENSSVLG00005019466	MCHR1 (ENSSVLG00005019589) #14	SLC25A17 (ENSSVLG00005019724) #15	XPNPEP3 (ENSSVLG00005020124) #18	DNAJB7 (ENSSVLG00005020233)	RBX1 (ENSSVLG00005020266) #19	ENSSVLG00005020321	EP300 (ENSSVLG00005020397) #20	L3MBTL2 (ENSSVLG00005020580) #22	CHADL (ENSSVLG00005020628) #23	ENSSVLG00005020695 #24	ENSSVLG00005020791 #24	ZC3H7B (ENSSVLG00005020817) #25	TEF (ENSSVLG00005020887) #26	TOB2 (ENSSVLG00005020946) #27	PHF5A (ENSSVLG00005020965) #28	ACO2 (ENSSVLG00005021008) #29	POLR3H (ENSSVLG00005021062) #30	CSDC2 (ENSSVLG00005021115) #31	PMM1 (ENSSVLG00005021168) #32	DESI1 (ENSSVLG00005021220) #33	XRCC6 (ENSSVLG00005021287) #34	ENSSVLG00005021427 ##35	MEI1 (ENSSVLG00005021530) #37
Hystricomorpha	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164
Hystricomorpha_a	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.a.a ##35	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37
Guinea pig	MODERN SPECIES	28	RPS19BP1 (ENSCPOG00000037075)	CACNA1I (ENSCPOG00000011963)	ENTHD1 (ENSCPOG00000014129) #7	GRAP2 (ENSCPOG00000040713) #8	FAM83F (ENSCPOG00000014133) #9	TNRC6B (ENSCPOG00000005705) #10	ADSL (ENSCPOG00000005715) #11	SGSM3 (ENSCPOG00000009876) #12	MRTFA (ENSCPOG00000009883) #13	MCHR1 (ENSCPOG00000012166) #14	SLC25A17 (ENSCPOG00000002289) #15	ENSCPOG00000002290 #16	XPNPEP3 (ENSCPOG00000002291) #18	RBX1 (ENSCPOG00000035978) #19	EP300 (ENSCPOG00000005438) #20	L3MBTL2 (ENSCPOG00000021063) #22	CHADL (ENSCPOG00000026967) #23	RANGAP1 (ENSCPOG00000004404) #24	ZC3H7B (ENSCPOG00000004413) #25	TEF (ENSCPOG00000020591) #26	TOB2 (ENSCPOG00000031873) #27	PHF5A (ENSCPOG00000033309) #28	ACO2 (ENSCPOG00000012642) #29	POLR3H (ENSCPOG00000012650) #30	CSDC2 (ENSCPOG00000037976) #31	PMM1 (ENSCPOG00000014618) #32	DESI1 (ENSCPOG00000038083) #33	XRCC6 (ENSCPOG00000003542) #34	SNU13 (ENSCPOG00000040165) #35	ENSCPOG00000010113 #37	CCDC134 (ENSCPOG00000000617)
Hystricomorpha_b	ANCESTRAL SPECIES	2	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129.g #15	ENSGT00390000001347.z.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.a.a ##35	ENSGT00390000002077 #37	ENSGT00390000020164
Long-tailed chinchilla	MODERN SPECIES	120	CACNA1I (ENSCLAG00000016706)	ENTHD1 (ENSCLAG00000016698) #7	GRAP2 (ENSCLAG00000016753) #8	FAM83F (ENSCLAG00000016721) #9	TNRC6B (ENSCLAG00000016942) #10	ADSL (ENSCLAG00000016908) #11	SGSM3 (ENSCLAG00000016510) #12	MRTFA (ENSCLAG00000016828) #13	MCHR1 (ENSCLAG00000016672) #14	SLC25A17 (ENSCLAG00000016789) #15	ST13 (ENSCLAG00000016711) #16	XPNPEP3 (ENSCLAG00000016993) #18	DNAJB7 (ENSCLAG00000016674)	ENSCLAG00000016739 #19	EP300 (ENSCLAG00000016995) #20	L3MBTL2 (ENSCLAG00000017319) #22	CHADL (ENSCLAG00000016821) #23	RANGAP1 (ENSCLAG00000017330) #24	ZC3H7B (ENSCLAG00000015052) #25	TEF (ENSCLAG00000016418) #26	TOB2 (ENSCLAG00000016670) #27	ENSCLAG00000016714 #28	ACO2 (ENSCLAG00000016998) #29	POLR3H (ENSCLAG00000016948) #30	CSDC2 (ENSCLAG00000016705) #31	PMM1 (ENSCLAG00000016748) #32	DESI1 (ENSCLAG00000016871) #33	XRCC6 (ENSCLAG00000016669) #34	SNU13 (ENSCLAG00000017182) ##35	ENSCLAG00000016769	ENSCLAG00000017166 #37
Degu	MODERN SPECIES	197	MROH7 (ENSODEG00000011770)	FAM151A (ENSODEG00000011460)	ACOT11 (ENSODEG00000011967)	ENSODEG00000020148	SSBP3 (ENSODEG00000011890)	MRPL37 (ENSODEG00000013096)	CYB5RL (ENSODEG00000013330)	CDCP2 (ENSODEG00000012753)	TCEANC2 (ENSODEG00000013526)	ENSODEG00000013663	LDLRAD1 (ENSODEG00000011774)	LRRC42 (ENSODEG00000012283)	IFT25 (ENSODEG00000013069)	DIO1 (ENSODEG00000012387)	ENSODEG00000019895	L3MBTL2 (ENSODEG00000013665) #22	CHADL (ENSODEG00000012116) #23	RANGAP1 (ENSODEG00000014583) #24	ZC3H7B (ENSODEG00000012411) #25	TEF (ENSODEG00000014126) #26	TOB2 (ENSODEG00000020030) #27	ENSODEG00000013125 #28	ACO2 (ENSODEG00000012550) #29	ENSODEG00000013641 #30	CSDC2 (ENSODEG00000015733) #31	PMM1 (ENSODEG00000012155) #32	DESI1 (ENSODEG00000012652) #33	XRCC6 (ENSODEG00000015847) #34	SNU13 (ENSODEG00000015632) ##35	ENSODEG00000012993 #37	CCDC134 (ENSODEG00000013183)
Naked mole-rat female	MODERN SPECIES	24	ENSHGLG00000017812 #9	ENSHGLG00000049183	ENSHGLG00000018482	ENSHGLG00000042810	ENSHGLG00000038998	ENSHGLG00000009306 #10	ADSL (ENSHGLG00000016466) #11	SGSM3 (ENSHGLG00000018585) #12	MRTFA (ENSHGLG00000009723) #13	MCHR1 (ENSHGLG00000005319) #14	SLC25A17 (ENSHGLG00000013720) #15	ENSHGLG00000013411 #16	XPNPEP3 (ENSHGLG00000013429) #18	RBX1 (ENSHGLG00000014822) #19	EP300 (ENSHGLG00000015586) #20	L3MBTL2 (ENSHGLG00000018290) #22	CHADL (ENSHGLG00000018119) #23	RANGAP1 (ENSHGLG00000015526) #24	ZC3H7B (ENSHGLG00000012263) #25	TEF (ENSHGLG00000050605) #26	TOB2 (ENSHGLG00000009302) #27	PHF5A (ENSHGLG00000042397) #28	ENSHGLG00000041589	Aco2 (ENSHGLG00000015463) #29	POLR3H (ENSHGLG00000014795) #30	CSDC2 (ENSHGLG00000016778) #31	PMM1 (ENSHGLG00000016980) #32	DESI1 (ENSHGLG00000039030) #33	ENSHGLG00000018078 #34	SNU13 (ENSHGLG00000018808) #35	MEI1 (ENSHGLG00000017177) #37
Lagomorpha	ANCESTRAL SPECIES	76	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b.b #35	ENSGT00390000002077 #37	ENSGT00390000020164
Rabbit	MODERN SPECIES	467	ENSOCUG00000032853	GRAP2 (ENSOCUG00000012267) #8	FAM83F (ENSOCUG00000014060) #9	TNRC6B (ENSOCUG00000016128) #10	ADSL (ENSOCUG00000016161) #11	SGSM3 (ENSOCUG00000012665) #12	ENSOCUG00000036824 #13	ENSOCUG00000023730 #13	MCHR1 (ENSOCUG00000017616) #14	SLC25A17 (ENSOCUG00000009630) #15	ENSOCUG00000009636 #16	DNAJB7 (ENSOCUG00000009651)	XPNPEP3 (ENSOCUG00000009642) #18	ENSOCUG00000035746 #19	EP300 (ENSOCUG00000011434) #20	L3MBTL2 (ENSOCUG00000002689) #22	CHADL (ENSOCUG00000002701) #23	RANGAP1 (ENSOCUG00000002704) #24	ZC3H7B (ENSOCUG00000002712) #25	TEF (ENSOCUG00000012866) #26	TOB2 (ENSOCUG00000027909) #27	PHF5A (ENSOCUG00000012705) #28	ACO2 (ENSOCUG00000021368) #29	POLR3H (ENSOCUG00000007275) #30	CSDC2 (ENSOCUG00000006938) #31	PMM1 (ENSOCUG00000006941) #32	ENSOCUG00000011875 #33	XRCC6 (ENSOCUG00000006948) #34	SNU13 (ENSOCUG00000023785) #35	MEI1 (ENSOCUG00000013337) #37	CCDC134 (ENSOCUG00000013355)
Pika	MODERN SPECIES	5257															EP300 (ENSOPRG00000012268) #20	L3MBTL2 (ENSOPRG00000012304) #22	CHADL (ENSOPRG00000012324) #23	ENSOPRG00000012340 #24
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Suina	ANCESTRAL SPECIES	21	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00990000212282	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Chacoan peccary	MODERN SPECIES	871	GRAP2 (ENSCWAG00000014592) #8	FAM83F (ENSCWAG00000014521) #9	TNRC6B (ENSCWAG00000013879) #10	ADSL (ENSCWAG00000013708) #11	SGSM3 (ENSCWAG00000013567) #12	MRTFA (ENSCWAG00000013293) #13	MCHR1 (ENSCWAG00000013134) #14	SLC25A17 (ENSCWAG00000013072) #15	ST13 (ENSCWAG00000013022) #16	ENSCWAG00000012999	ENSCWAG00000012977	XPNPEP3 (ENSCWAG00000012851) #18	RBX1 (ENSCWAG00000012787) #19	ENSCWAG00000012771	EP300 (ENSCWAG00000012442) #20	L3MBTL2 (ENSCWAG00000012412) #22	CHADL (ENSCWAG00000012334) #23	RANGAP1 (ENSCWAG00000012282) #24	ZC3H7B (ENSCWAG00000012215) #25	TEF (ENSCWAG00000012151) #26	TOB2 (ENSCWAG00000012139) #27	PHF5A (ENSCWAG00000012101) #28	ACO2 (ENSCWAG00000012041) #29	POLR3H (ENSCWAG00000011965) #30	CSDC2 (ENSCWAG00000011932) #31	PMM1 (ENSCWAG00000011902) #32	DESI1 (ENSCWAG00000011787) #33	XRCC6 (ENSCWAG00000011601) #34	SNU13 (ENSCWAG00000011528) #35	MEI1 (ENSCWAG00000011137) #37	CCDC134 (ENSCWAG00000011088)
Pig	MODERN SPECIES	13	GRAP2 (ENSSSCG00000000080) #8	FAM83F (ENSSSCG00000000079) #9	TNRC6B (ENSSSCG00000000078) #10	ADSL (ENSSSCG00000000077) #11	ENSSSCG00000055170 #13	SGSM3 (ENSSSCG00000000076) #12	ENSSSCG00000000075 #13	MCHR1 (ENSSSCG00000000074) #14	ENSSSCG00000061921	SLC25A17 (ENSSSCG00000000072) #15	ST13 (ENSSSCG00000000071) #16	ENSSSCG00000034801	XPNPEP3 (ENSSSCG00000033823) #18	ENSSSCG00000034230 #19	EP300 (ENSSSCG00000000068) #20	L3MBTL2 (ENSSSCG00000000066) #22	CHADL (ENSSSCG00000000067) #23	RANGAP1 (ENSSSCG00000028202) #24	ZC3H7B (ENSSSCG00000033036) #25	TEF (ENSSSCG00000035152) #26	TOB2 (ENSSSCG00000037958) #27	PHF5A (ENSSSCG00000035082) #28	ACO2 (ENSSSCG00000000064) #29	POLR3H (ENSSSCG00000000063) #30	CSDC2 (ENSSSCG00000000062) #31	PMM1 (ENSSSCG00000000061) #32	DESI1 (ENSSSCG00000034265) #33	XRCC6 (ENSSSCG00000000059) #34	SNU13 (ENSSSCG00000000058) #35	ENSSSCG00000057322 #36	MEI1 (ENSSSCG00000034405) #37
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Camelidae	ANCESTRAL SPECIES	28	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00390000002077 #37	ENSGT00390000020164
Alpaca	MODERN SPECIES	3199																ENSVPAG00000001197 #22
Arabian camel	MODERN SPECIES	3	ENSCDRG00005014742	GRAP2 (ENSCDRG00005014772) #8	FAM83F (ENSCDRG00005014830) #9	TNRC6B (ENSCDRG00005014891) #10	ADSL (ENSCDRG00005015465) #11	SGSM3 (ENSCDRG00005016107) #12	MRTFA (ENSCDRG00005016155) #13	ENSCDRG00005016267	MCHR1 (ENSCDRG00005016289) #14	SLC25A17 (ENSCDRG00005016332) #15	ST13 (ENSCDRG00005016448) #16	XPNPEP3 (ENSCDRG00005016561) #18	DNAJB7 (ENSCDRG00005016641)	RBX1 (ENSCDRG00005016650) #19	EP300 (ENSCDRG00005016690) #20	L3MBTL2 (ENSCDRG00005016922) #22	CHADL (ENSCDRG00005017024) #23	RANGAP1 (ENSCDRG00005017066) #24	ZC3H7B (ENSCDRG00005017099) #25	TEF (ENSCDRG00005017170) #26	TOB2 (ENSCDRG00005017252) #27	PHF5A (ENSCDRG00005017267) #28	ACO2 (ENSCDRG00005017299) #29	POLR3H (ENSCDRG00005017372) #30	CSDC2 (ENSCDRG00005017436) #31	PMM1 (ENSCDRG00005017476) #32	DESI1 (ENSCDRG00005017505) #33	XRCC6 (ENSCDRG00005003310) #34	SNU13 (ENSCDRG00005003357) #35	MEI1 (ENSCDRG00005003416) #37	CCDC134 (ENSCDRG00005003531)
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Caprinae	ANCESTRAL SPECIES		ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Rambouillet Sheep	MODERN SPECIES	19	ENTHD1 (ENSOARG00020023243) #7	GRAP2 (ENSOARG00020023284) #8	FAM83F (ENSOARG00020023308) #9	TNRC6B (ENSOARG00020023375) #10	ADSL (ENSOARG00020023696) #11	ENSOARG00020023873 #12	ENSOARG00020023916 #12	MRTFA (ENSOARG00020023983) #13	MCHR1 (ENSOARG00020024030) #14	SLC25A17 (ENSOARG00020024071) #15	ST13 (ENSOARG00020024111) #16	XPNPEP3 (ENSOARG00020024132) #18	DNAJB7 (ENSOARG00020024159)	RBX1 (ENSOARG00020024169) #19	EP300 (ENSOARG00020024211) #20	L3MBTL2 (ENSOARG00020024288) #22	CHADL (ENSOARG00020024330) #23	RANGAP1 (ENSOARG00020024343) #24	ZC3H7B (ENSOARG00020024392) #25	TEF (ENSOARG00020024430) #26	TOB2 (ENSOARG00020024450) #27	PHF5A (ENSOARG00020024461) #28	ACO2 (ENSOARG00020024476) #29	POLR3H (ENSOARG00020024546) #30	CSDC2 (ENSOARG00020024566) #31	PMM1 (ENSOARG00020024579) #32	DESI1 (ENSOARG00020024591) #33	ENSOARG00020024613 #34	ENSOARG00020024631 #35	ENSOARG00020024666 #36	MEI1 (ENSOARG00020024711) #37
Goat	MODERN SPECIES	24	CACNA1I (ENSCHIG00000021978)	ENTHD1 (ENSCHIG00000019751) #7	GRAP2 (ENSCHIG00000015296) #8	FAM83F (ENSCHIG00000026060) #9	TNRC6B (ENSCHIG00000003491) #10	ENSCHIG00000016369 #11	SGSM3 (ENSCHIG00000018086) #12	MRTFA (ENSCHIG00000016119) #13	MCHR1 (ENSCHIG00000022709) #14	SLC25A17 (ENSCHIG00000026918) #15	ENSCHIG00000017681 #16	XPNPEP3 (ENSCHIG00000016070) #18	DNAJB7 (ENSCHIG00000012831)	ENSCHIG00000025708 #19	EP300 (ENSCHIG00000017767) #20	L3MBTL2 (ENSCHIG00000021479) #22	CHADL (ENSCHIG00000025971) #23	RANGAP1 (ENSCHIG00000026389) #24	ZC3H7B (ENSCHIG00000020469) #25	TEF (ENSCHIG00000016008) #26	TOB2 (ENSCHIG00000003528) #27	PHF5A (ENSCHIG00000015826) #28	ACO2 (ENSCHIG00000007877) #29	POLR3H (ENSCHIG00000013984) #30	CSDC2 (ENSCHIG00000021658) #31	PMM1 (ENSCHIG00000006787) #32	DESI1 (ENSCHIG00000017498) #33	XRCC6 (ENSCHIG00000012853) #34	ENSCHIG00000015834 #35	ENSCHIG00000017103 #36	MEI1 (ENSCHIG00000014057) #37
Bovinae	ANCESTRAL SPECIES	10	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.d #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Bos	ANCESTRAL SPECIES	2	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00390000001347.u.b #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.d #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Bos_a	ANCESTRAL SPECIES	24	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000168153	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.a.a.b	ENSGT00730000111100.d #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36
Domestic yak	MODERN SPECIES	24	ENTHD1 (ENSBGRG00000006865) #7	GRAP2 (ENSBGRG00000006892) #8	FAM83F (ENSBGRG00000006932) #9	TNRC6B (ENSBGRG00000007053) #10	ADSL (ENSBGRG00000008001) #11	SGSM3 (ENSBGRG00000008503) #12	MRTFA (ENSBGRG00000008675) #13	MCHR1 (ENSBGRG00000009343) #14	SLC25A17 (ENSBGRG00000006056) #15	ENSBGRG00000006125	ST13 (ENSBGRG00000006165) #16	XPNPEP3 (ENSBGRG00000006217) #18	DNAJB7 (ENSBGRG00000006284)	ENSBGRG00000006304	EP300 (ENSBGRG00000006401) #20	L3MBTL2 (ENSBGRG00000006582) #22	CHADL (ENSBGRG00000006835) #23	RANGAP1 (ENSBGRG00000006909) #24	ENSBGRG00000006985	ZC3H7B (ENSBGRG00000007031) #25	TEF (ENSBGRG00000007661) #26	TOB2 (ENSBGRG00000007744) #27	ACO2 (ENSBGRG00000007814) #29	PHF5A (ENSBGRG00000008433) #28	POLR3H (ENSBGRG00000008506) #30	CSDC2 (ENSBGRG00000008598) #31	PMM1 (ENSBGRG00000008653) #32	ENSBGRG00000008717	ENSBGRG00000008726 #33	DESI1 (ENSBGRG00000008734) #33	XRCC6 (ENSBGRG00000008781) #34
Wild yak	MODERN SPECIES	2416											ENSBMUG00000016028 #16	XPNPEP3 (ENSBMUG00000016068) #18	DNAJB7 (ENSBMUG00000016085)	ENSBMUG00000016140	EP300 (ENSBMUG00000016206) #20	L3MBTL2 (ENSBMUG00000016250) #22	ENSBMUG00000016306 #23	RANGAP1 (ENSBMUG00000016341) #24	ZC3H7B (ENSBMUG00000016375) #25	TEF (ENSBMUG00000016387) #26	ENSBMUG00000016406 #27	PHF5A (ENSBMUG00000016413) #28	ACO2 (ENSBMUG00000016428) #29	POLR3H (ENSBMUG00000016468) #30	CSDC2 (ENSBMUG00000016496) #31	PMM1 (ENSBMUG00000016511) #32	ENSBMUG00000016533	XRCC6 (ENSBMUG00000016669) #34	SNU13 (ENSBMUG00000016711) #35	ENSBMUG00000016715 #36	MEI1 (ENSBMUG00000016769) #37
Bos_b	ANCESTRAL SPECIES	30	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00950000182891.a.a.b.b	ENSGT00390000001347.v.n.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100.d #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Cow	MODERN SPECIES	24	ENTHD1 (ENSBTAG00000000326) #7	GRAP2 (ENSBTAG00000015157) #8	FAM83F (ENSBTAG00000014247) #9	TNRC6B (ENSBTAG00000021076) #10	ADSL (ENSBTAG00000000077) #11	SGSM3 (ENSBTAG00000009624) #12	MRTFA (ENSBTAG00000002630) #13	MCHR1 (ENSBTAG00000004048) #14	SLC25A17 (ENSBTAG00000006200) #15	ENSBTAG00000054845	ST13 (ENSBTAG00000006202) #16	XPNPEP3 (ENSBTAG00000006204) #18	DNAJB7 (ENSBTAG00000006205)	RBX1 (ENSBTAG00000053583) #19	EP300 (ENSBTAG00000016198) #20	L3MBTL2 (ENSBTAG00000030222) #22	CHADL (ENSBTAG00000040106) #23	RANGAP1 (ENSBTAG00000012481) #24	ZC3H7B (ENSBTAG00000002782) #25	TEF (ENSBTAG00000016580) #26	TOB2 (ENSBTAG00000015109) #27	PHF5A (ENSBTAG00000006423) #28	ACO2 (ENSBTAG00000006429) #29	POLR3H (ENSBTAG00000005311) #30	CSDC2 (ENSBTAG00000004004) #31	PMM1 (ENSBTAG00000004009) #32	DESI1 (ENSBTAG00000047942) #33	XRCC6 (ENSBTAG00000006103) #34	SNU13 (ENSBTAG00000006104) #35	ENSBTAG00000047629 #36	MEI1 (ENSBTAG00000004488) #37
Hybrid Bos Indicus	MODERN SPECIES	24	ENTHD1 (ENSBIXG00005028278) #7	GRAP2 (ENSBIXG00005028301) #8	FAM83F (ENSBIXG00005004869) #9	TNRC6B (ENSBIXG00005028516) #10	ADSL (ENSBIXG00005028664) #11	SGSM3 (ENSBIXG00005028733) #12	ENSBIXG00005028750	MRTFA (ENSBIXG00005002283) #13	MCHR1 (ENSBIXG00005028885) #14	SLC25A17 (ENSBIXG00005005058) #15	ST13 (ENSBIXG00005005077) #16	DNAJB7 (ENSBIXG00005002171)	XPNPEP3 (ENSBIXG00005028956) #18	ENSBIXG00005028979 #19	EP300 (ENSBIXG00005029142) #20	L3MBTL2 (ENSBIXG00005001768) #22	CHADL (ENSBIXG00005001706) #23	RANGAP1 (ENSBIXG00005029195) #24	ZC3H7B (ENSBIXG00005005261) #25	TEF (ENSBIXG00005030291) #26	TOB2 (ENSBIXG00005030282) #27	PHF5A (ENSBIXG00005030276) #28	ACO2 (ENSBIXG00005030244) #29	POLR3H (ENSBIXG00005030223) #30	CSDC2 (ENSBIXG00005030210) #31	PMM1 (ENSBIXG00005030190) #32	ENSBIXG00005030184	DESI1 (ENSBIXG00005030174) #33	XRCC6 (ENSBIXG00005030124) #34	SNU13 (ENSBIXG00005030086) #35	ENSBIXG00005030078 #36
American bison	MODERN SPECIES	2520											ST13 (ENSBBBG00000016558) #16	ENSBBBG00000016560	XPNPEP3 (ENSBBBG00000016577) #18	ENSBBBG00000000757 #19	EP300 (ENSBBBG00000004102) #20	L3MBTL2 (ENSBBBG00000008378) #22	RANGAP1 (ENSBBBG00000004143) #24	ZC3H7B (ENSBBBG00000007907) #25	TEF (ENSBBBG00000016815) #26	ENSBBBG00000016832 #27	PHF5A (ENSBBBG00000004165) #28	ACO2 (ENSBBBG00000016876) #29	POLR3H (ENSBBBG00000016919) #30	CSDC2 (ENSBBBG00000004183) #31	PMM1 (ENSBBBG00000016943) #32	DESI1 (ENSBBBG00000016954) #33	XRCC6 (ENSBBBG00000017117) #34	SNU13 (ENSBBBG00000017154) #35	ENSBBBG00000017162 #36	MEI1 (ENSBBBG00000017211) #37	CCDC134 (ENSBBBG00000004265)
Siberian musk deer	MODERN SPECIES	1247	ENTHD1 (ENSMMSG00000015164) #7	GRAP2 (ENSMMSG00000015134) #8	FAM83F (ENSMMSG00000015097) #9	TNRC6B (ENSMMSG00000014702) #10	ADSL (ENSMMSG00000014463) #11	SGSM3 (ENSMMSG00000014416) #12	MRTFA (ENSMMSG00000014290) #13	MCHR1 (ENSMMSG00000014255) #14	ENSMMSG00000014246	SLC25A17 (ENSMMSG00000014156) #15	ST13 (ENSMMSG00000014107) #16	DNAJB7 (ENSMMSG00000014099)	XPNPEP3 (ENSMMSG00000014083) #18	RBX1 (ENSMMSG00000014067) #19	EP300 (ENSMMSG00000013986) #20	L3MBTL2 (ENSMMSG00000013921) #22	CHADL (ENSMMSG00000013880) #23	RANGAP1 (ENSMMSG00000013802) #24	ZC3H7B (ENSMMSG00000013723) #25	TEF (ENSMMSG00000013679) #26	TOB2 (ENSMMSG00000013665) #27	ENSMMSG00000013644 #28	ACO2 (ENSMMSG00000013563) #29	POLR3H (ENSMMSG00000013540) #30	CSDC2 (ENSMMSG00000013524) #31	PMM1 (ENSMMSG00000013501) #32	DESI1 (ENSMMSG00000013489) #33	XRCC6 (ENSMMSG00000013395) #34	SNU13 (ENSMMSG00000024016) #35	ENSMMSG00000024007 #36	MEI1 (ENSMMSG00000023993) #37
Yarkand deer	MODERN SPECIES	14	ENTHD1 (ENSCHYG00000016496) #7	ENSCHYG00000016578 #8	FAM83F (ENSCHYG00000016679) #9	TNRC6B (ENSCHYG00000016871) #10	ENSCHYG00000017987 #11	SGSM3 (ENSCHYG00000020154) #12	MRTFA (ENSCHYG00000018451) #13	MCHR1 (ENSCHYG00000020632) #14	SLC25A17 (ENSCHYG00000020675) #15	ENSCHYG00000020840 #16	XPNPEP3 (ENSCHYG00000020994) #18	DNAJB7 (ENSCHYG00000021227)	ENSCHYG00000021280	ENSCHYG00000021391	EP300 (ENSCHYG00000021494) #20	L3MBTL2 (ENSCHYG00000021964) #22	CHADL (ENSCHYG00000022049) #23	RANGAP1 (ENSCHYG00000022092) #24	ZC3H7B (ENSCHYG00000022171) #25	TEF (ENSCHYG00000022489) #26	TOB2 (ENSCHYG00000022537) #27	PHF5A (ENSCHYG00000022548) #28	ACO2 (ENSCHYG00000022583) #29	POLR3H (ENSCHYG00000022721) #30	CSDC2 (ENSCHYG00000022821) #31	PMM1 (ENSCHYG00000022842) #32	DESI1 (ENSCHYG00000022886) #33	XRCC6 (ENSCHYG00000022928) #34	SNU13 (ENSCHYG00000023097) #35	ENSCHYG00000023150 #36	MEI1 (ENSCHYG00000023169) #37
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000163470	ENSGT00940000155618.fb.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.m #34	ENSGT00550000074840.y.b.k #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.m #34	ENSGT00550000074840.y.b.k #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518.g #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.m #34	ENSGT00550000074840.y.b.k #35	ENSGT00390000002077 #37	ENSGT00390000020164
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00420000029792.i	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518.g #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.m #34	ENSGT00550000074840.y.b.k #35	ENSGT00390000002077 #37	ENSGT00390000020164
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.n.b #16	ENSGT00940000153657.A.k.a #18	ENSGT00940000155618.fb.a #19	ENSGT00420000029792.i	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518.g #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B.m #34	ENSGT00550000074840.y.b.k #35	ENSGT00390000002077 #37	ENSGT00390000020164
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	111	CACNA1I (ENSDLEG00000011201)	ENTHD1 (ENSDLEG00000011347) #7	GRAP2 (ENSDLEG00000011374) #8	FAM83F (ENSDLEG00000011396) #9	TNRC6B (ENSDLEG00000011432) #10	ADSL (ENSDLEG00000011502) #11	SGSM3 (ENSDLEG00000011556) #12	MRTFA (ENSDLEG00000011650) #13	MCHR1 (ENSDLEG00000011702) #14	SLC25A17 (ENSDLEG00000011720) #15	ENSDLEG00000011732 #16	XPNPEP3 (ENSDLEG00000011748) #18	RBX1 (ENSDLEG00000011777) #19	ENSDLEG00000011787	EP300 (ENSDLEG00000011805) #20	ENSDLEG00000011889 #22	ENSDLEG00000015706 #23	ENSDLEG00000015729 #24	ENSDLEG00000015788 #22	ENSDLEG00000015952 #23	ENSDLEG00000015992 #24	ZC3H7B (ENSDLEG00000016127) #25	TEF (ENSDLEG00000016157) #26	TOB2 (ENSDLEG00000016165) #27	PHF5A (ENSDLEG00000016171) #28	ACO2 (ENSDLEG00000016194) #29	POLR3H (ENSDLEG00000016302) #30	CSDC2 (ENSDLEG00000016311) #31	PMM1 (ENSDLEG00000016320) #32	DESI1 (ENSDLEG00000016339) #33	ENSDLEG00000016354
Beluga whale	MODERN SPECIES	111	FAM83F (ENSDLEG00000011396) #9	TNRC6B (ENSDLEG00000011432) #10	ADSL (ENSDLEG00000011502) #11	SGSM3 (ENSDLEG00000011556) #12	MRTFA (ENSDLEG00000011650) #13	MCHR1 (ENSDLEG00000011702) #14	SLC25A17 (ENSDLEG00000011720) #15	ENSDLEG00000011732 #16	XPNPEP3 (ENSDLEG00000011748) #18	RBX1 (ENSDLEG00000011777) #19	ENSDLEG00000011787	EP300 (ENSDLEG00000011805) #20	ENSDLEG00000011889 #22	ENSDLEG00000015706 #23	ENSDLEG00000015729 #24	ENSDLEG00000015788 #22	ENSDLEG00000015952 #23	ENSDLEG00000015992 #24	ZC3H7B (ENSDLEG00000016127) #25	TEF (ENSDLEG00000016157) #26	TOB2 (ENSDLEG00000016165) #27	PHF5A (ENSDLEG00000016171) #28	ACO2 (ENSDLEG00000016194) #29	POLR3H (ENSDLEG00000016302) #30	CSDC2 (ENSDLEG00000016311) #31	PMM1 (ENSDLEG00000016320) #32	DESI1 (ENSDLEG00000016339) #33	ENSDLEG00000016354	ENSDLEG00000016391 #34	SNU13 (ENSDLEG00000016619) #35	MEI1 (ENSDLEG00000016651) #37
Narwhal	MODERN SPECIES	313	CACNA1I (ENSMMNG00015015894)	ENTHD1 (ENSMMNG00015016228) #7	GRAP2 (ENSMMNG00015016272) #8	FAM83F (ENSMMNG00015016316) #9	TNRC6B (ENSMMNG00015016449) #10	ADSL (ENSMMNG00015016797) #11	SGSM3 (ENSMMNG00015016971) #12	MRTFA (ENSMMNG00015017058) #13	MCHR1 (ENSMMNG00015017183) #14	SLC25A17 (ENSMMNG00015017233) #15	ENSMMNG00015017322 #16	ENSMMNG00015017374 #18	ENSMMNG00015017418 #19	ENSMMNG00015017443	EP300 (ENSMMNG00015017471) #20	L3MBTL2 (ENSMMNG00015017671) #22	CHADL (ENSMMNG00015017707) #23	RANGAP1 (ENSMMNG00015017739) #24	ZC3H7B (ENSMMNG00015017794) #25	TEF (ENSMMNG00015017847) #26	TOB2 (ENSMMNG00015017903) #27	PHF5A (ENSMMNG00015017910) #28	ACO2 (ENSMMNG00015017952) #29	POLR3H (ENSMMNG00015018103) #30	CSDC2 (ENSMMNG00015018146) #31	PMM1 (ENSMMNG00015018177) #32	DESI1 (ENSMMNG00015018207) #33	ENSMMNG00015018237 #34	ENSMMNG00015018285	SNU13 (ENSMMNG00015018317) #35	MEI1 (ENSMMNG00015018390) #37
Vaquita	MODERN SPECIES	1	ENTHD1 (ENSPSNG00000008777) #7	GRAP2 (ENSPSNG00000008719) #8	FAM83F (ENSPSNG00000008652) #9	TNRC6B (ENSPSNG00000008458) #10	ADSL (ENSPSNG00000008171) #11	SGSM3 (ENSPSNG00000008035) #12	MRTFA (ENSPSNG00000007857) #13	MCHR1 (ENSPSNG00000007750) #14	SLC25A17 (ENSPSNG00000007697) #15	ENSPSNG00000007658 #16	XPNPEP3 (ENSPSNG00000007604) #18	RBX1 (ENSPSNG00000007572) #19	ENSPSNG00000007559	EP300 (ENSPSNG00000007446) #20	ENSPSNG00000007413	L3MBTL2 (ENSPSNG00000007368) #22	CHADL (ENSPSNG00000007294) #23	RANGAP1 (ENSPSNG00000007244) #24	ZC3H7B (ENSPSNG00000007187) #25	TEF (ENSPSNG00000007130) #26	TOB2 (ENSPSNG00000007102) #27	PHF5A (ENSPSNG00000007072) #28	ACO2 (ENSPSNG00000006999) #29	POLR3H (ENSPSNG00000006925) #30	CSDC2 (ENSPSNG00000006894) #31	PMM1 (ENSPSNG00000006869) #32	DESI1 (ENSPSNG00000006766) #33	ENSPSNG00000006727 #34	SNU13 (ENSPSNG00000006667) #35	MEI1 (ENSPSNG00000006612) #37	CCDC134 (ENSPSNG00000006568)
Dolphin	MODERN SPECIES	3094															EP300 (ENSTTRG00000003342) #20	L3MBTL2 (ENSTTRG00000003350) #22	CHADL (ENSTTRG00000003358) #23	RANGAP1 (ENSTTRG00000003359) #24	ZC3H7B (ENSTTRG00000003362) #25	TEF (ENSTTRG00000003365) #26	TOB2 (ENSTTRG00000003366) #27	PHF5A (ENSTTRG00000003369) #28	ACO2 (ENSTTRG00000003371) #29	POLR3H (ENSTTRG00000003373) #30
Sperm whale	MODERN SPECIES	38																L3MBTL2 (ENSPCTG00005022052) #22	CHADL (ENSPCTG00005022074) #23	RANGAP1 (ENSPCTG00005022082) #24	ZC3H7B (ENSPCTG00005022087) #25	TEF (ENSPCTG00005022099) #26	TOB2 (ENSPCTG00005022106) #27
Blue whale	MODERN SPECIES	1	CACNA1I (ENSBMSG00010010289)	ENTHD1 (ENSBMSG00010010382) #7	GRAP2 (ENSBMSG00010010395) #8	FAM83F (ENSBMSG00010010409) #9	TNRC6B (ENSBMSG00010010473) #10	ENSBMSG00010010564	ADSL (ENSBMSG00010010596) #11	SGSM3 (ENSBMSG00010010739) #12	MRTFA (ENSBMSG00010010792) #13	MCHR1 (ENSBMSG00010010832) #14	SLC25A17 (ENSBMSG00010010859) #15	ST13 (ENSBMSG00010010885) #16	ENSBMSG00010010899 #18	ENSBMSG00010010940 #19	EP300 (ENSBMSG00010010998) #20	L3MBTL2 (ENSBMSG00010011148) #22	CHADL (ENSBMSG00010011175) #23	RANGAP1 (ENSBMSG00010011194) #24	ZC3H7B (ENSBMSG00010011209) #25	ENSBMSG00010011228 #26	TOB2 (ENSBMSG00010013844) #27	ENSBMSG00010013857 #28	ACO2 (ENSBMSG00010013926) #29	POLR3H (ENSBMSG00010014040) #30	ENSBMSG00010014114	CSDC2 (ENSBMSG00010014140) #31	PMM1 (ENSBMSG00010014166) #32	DESI1 (ENSBMSG00010014206) #33	ENSBMSG00010014265 #34	ENSBMSG00010014449 #35	MEI1 (ENSBMSG00010014550) #37
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Carnivora	ANCESTRAL SPECIES	3	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Caniformia	ANCESTRAL SPECIES	20	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Ursus	ANCESTRAL SPECIES	64									ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
American black bear	MODERN SPECIES	742														RBX1 (ENSUAMG00000023721) #19	EP300 (ENSUAMG00000023761) #20	L3MBTL2 (ENSUAMG00000024453) #22	CHADL (ENSUAMG00000024456) #23	RANGAP1 (ENSUAMG00000024459) #24
Polar bear	MODERN SPECIES	248									MCHR1 (ENSUMAG00000021761) #14	SLC25A17 (ENSUMAG00000021756) #15	ST13 (ENSUMAG00000021749) #16	DNAJB7 (ENSUMAG00000021748)	XPNPEP3 (ENSUMAG00000021746) #18	RBX1 (ENSUMAG00000021734) #19	EP300 (ENSUMAG00000021277) #20	L3MBTL2 (ENSUMAG00000021117) #22	RANGAP1 (ENSUMAG00000021110) #24	ZC3H7B (ENSUMAG00000021049) #25	TEF (ENSUMAG00000021034) #26	PHF5A (ENSUMAG00000021030) #28	ACO2 (ENSUMAG00000021024) #29	POLR3H (ENSUMAG00000021018) #30	CSDC2 (ENSUMAG00000021015) #31	PMM1 (ENSUMAG00000021010) #32	DESI1 (ENSUMAG00000021006) #33	XRCC6 (ENSUMAG00000021004) #34	SNU13 (ENSUMAG00000021000) #35	ENSUMAG00000020998 #36	MEI1 (ENSUMAG00000020981) #37	CCDC134 (ENSUMAG00000020966)	SREBF2 (ENSUMAG00000020699)
Giant Panda	MODERN SPECIES	6	ENTHD1 (ENSAMEG00000010995) #7	GRAP2 (ENSAMEG00000011003) #8	ENSAMEG00000011020 #9	ENSAMEG00000026240 #9	TNRC6B (ENSAMEG00000011025) #10	ADSL (ENSAMEG00000011062) #11	SGSM3 (ENSAMEG00000011110) #12	MRTFA (ENSAMEG00000011151) #13	MCHR1 (ENSAMEG00000013865) #14	SLC25A17 (ENSAMEG00000013867) #15	ST13 (ENSAMEG00000013880) #16	DNAJB7 (ENSAMEG00000019443)	ENSAMEG00000024588	EP300 (ENSAMEG00000013940) #20	ENSAMEG00000031394	L3MBTL2 (ENSAMEG00000014010) #22	CHADL (ENSAMEG00000014053) #23	RANGAP1 (ENSAMEG00000014068) #24	ZC3H7B (ENSAMEG00000002171) #25	TEF (ENSAMEG00000027518) #26	TOB2 (ENSAMEG00000018561) #27	PHF5A (ENSAMEG00000015687) #28	ACO2 (ENSAMEG00000015641) #29	POLR3H (ENSAMEG00000015630) #30	CSDC2 (ENSAMEG00000015626) #31	PMM1 (ENSAMEG00000015609) #32	DESI1 (ENSAMEG00000015602) #33	XRCC6 (ENSAMEG00000015579) #34	SNU13 (ENSAMEG00000015574) #35	ENSAMEG00000030983 #36	MEI1 (ENSAMEG00000015554) #37
Mustelinae	ANCESTRAL SPECIES	4	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
American mink	MODERN SPECIES	105	ENTHD1 (ENSNVIG00000001134) #7	GRAP2 (ENSNVIG00000001114) #8	ENSNVIG00000001106	FAM83F (ENSNVIG00000001092) #9	TNRC6B (ENSNVIG00000000926) #10	ADSL (ENSNVIG00000000889) #11	SGSM3 (ENSNVIG00000000810) #12	ENSNVIG00000000800 #13	ENSNVIG00000000774 #13	MCHR1 (ENSNVIG00000000746) #14	SLC25A17 (ENSNVIG00000000669) #15	DNAJB7 (ENSNVIG00000000663)	XPNPEP3 (ENSNVIG00000000649) #18	RBX1 (ENSNVIG00000000637) #19	EP300 (ENSNVIG00000000593) #20	L3MBTL2 (ENSNVIG00000000543) #22	CHADL (ENSNVIG00000000532) #23	RANGAP1 (ENSNVIG00000000510) #24	ZC3H7B (ENSNVIG00000000487) #25	TEF (ENSNVIG00000000478) #26	TOB2 (ENSNVIG00000000471) #27	PHF5A (ENSNVIG00000000451) #28	ACO2 (ENSNVIG00000000421) #29	RPC8 (ENSNVIG00000000359) #30	CSDC2 (ENSNVIG00000000351) #31	PMM1 (ENSNVIG00000000343) #32	DESI1 (ENSNVIG00000000338) #33	XRCC6 (ENSNVIG00000000144) #34	SNU13 (ENSNVIG00000000081) #35	ENSNVIG00000000049 #36	MEI1 (ENSNVIG00000022357) #37
Ferret	MODERN SPECIES	324					TNRC6B (ENSMPUG00000016442) #10	ADSL (ENSMPUG00000016441) #11	SGSM3 (ENSMPUG00000016439) #12	MRTFA (ENSMPUG00000016438) #13	MCHR1 (ENSMPUG00000016437) #14	SLC25A17 (ENSMPUG00000016436) #15	ST13 (ENSMPUG00000016432) #16	DNAJB7 (ENSMPUG00000019596)	XPNPEP3 (ENSMPUG00000016431) #18	RBX1 (ENSMPUG00000016430) #19	EP300 (ENSMPUG00000016427) #20	L3MBTL2 (ENSMPUG00000016425) #22	CHADL (ENSMPUG00000016416) #23	ENSMPUG00000016414	RANGAP1 (ENSMPUG00000016411) #24	ZC3H7B (ENSMPUG00000016409) #25	TEF (ENSMPUG00000016407) #26	TOB2 (ENSMPUG00000019594) #27	PHF5A (ENSMPUG00000016398) #28	ACO2 (ENSMPUG00000016396) #29	POLR3H (ENSMPUG00000016395) #30	CSDC2 (ENSMPUG00000016392) #31	PMM1 (ENSMPUG00000016390) #32	DESI1 (ENSMPUG00000016385) #33	SNU13 (ENSMPUG00000016384) #35	XRCC6 (ENSMPUG00000016382) #34	ENSMPUG00000016380 #36
Canidae	ANCESTRAL SPECIES	10	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00990000207858	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Canis_lupus	ANCESTRAL SPECIES	9	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00950000182802.B.a.a.a.a.i.d.d.a	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.c.a #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Dingo	MODERN SPECIES	307	ENSCAFG00020002362	GRAP2 (ENSCAFG00020002345) #8	FAM83F (ENSCAFG00020002339) #9	ENSCAFG00020002329	TNRC6B (ENSCAFG00020002189) #10	ADSL (ENSCAFG00020002150) #11	SGSM3 (ENSCAFG00020002141) #12	MRTFA (ENSCAFG00020002129) #13	MCHR1 (ENSCAFG00020002114) #14	SLC25A17 (ENSCAFG00020002111) #15	ENSCAFG00020002103	XPNPEP3 (ENSCAFG00020002086) #18	RBX1 (ENSCAFG00020002079) #19	ENSCAFG00020002075 #20	ENSCAFG00020002042 #20	L3MBTL2 (ENSCAFG00020002034) #22	CHADL (ENSCAFG00020002027) #23	RANGAP1 (ENSCAFG00020002019) #24	ZC3H7B (ENSCAFG00020002005) #25	TEF (ENSCAFG00020001995) #26	TOB2 (ENSCAFG00020001990) #27	PHF5A (ENSCAFG00020001984) #28	ACO2 (ENSCAFG00020001976) #29	POLR3H (ENSCAFG00020001964) #30	CSDC2 (ENSCAFG00020001951) #31	PMM1 (ENSCAFG00020001948) #32	ENSCAFG00020001943	DESI1 (ENSCAFG00020001937) #33	XRCC6 (ENSCAFG00020001627) #34	ENSCAFG00020001539 #35	ENSCAFG00020001537 #36
Dog	MODERN SPECIES	1	ENSCAFG00845021105	GRAP2 (ENSCAFG00845021051) #8	FAM83F (ENSCAFG00845021004) #9	ENSCAFG00845020976	TNRC6B (ENSCAFG00845020617) #10	ADSL (ENSCAFG00845020328) #11	SGSM3 (ENSCAFG00845020097) #12	MRTFA (ENSCAFG00845019751) #13	MCHR1 (ENSCAFG00845019660) #14	MDH2 (ENSCAFG00845019601)	SLC25A17 (ENSCAFG00845019500) #15	ST13 (ENSCAFG00845019349) #16	XPNPEP3 (ENSCAFG00845019212) #18	RBX1 (ENSCAFG00845019033) #19	EP300 (ENSCAFG00845018383) #20	L3MBTL2 (ENSCAFG00845017974) #22	RANGAP1 (ENSCAFG00845017556) #24	ZC3H7B (ENSCAFG00845017344) #25	TEF (ENSCAFG00845017239) #26	TOB2 (ENSCAFG00845017159) #27	PHF5A (ENSCAFG00845017076) #28	ACO2 (ENSCAFG00845016969) #29	POLR3H (ENSCAFG00845016808) #30	CSDC2 (ENSCAFG00845016721) #31	PMM1 (ENSCAFG00845016625) #32	ENSCAFG00845016514 #33	XRCC6 (ENSCAFG00845016282) #34	SNU13 (ENSCAFG00845016061) #35	ENSCAFG00845016016 #36	MEI1 (ENSCAFG00845015865) #37	CCDC134 (ENSCAFG00845015779)
Red fox	MODERN SPECIES	134	RPS19BP1 (ENSVVUG00000014521)	CACNA1I (ENSVVUG00000007487)	ENTHD1 (ENSVVUG00000007235) #7	ENSVVUG00000007232	GRAP2 (ENSVVUG00000007218) #8	TNRC6B (ENSVVUG00000007064) #10	ADSL (ENSVVUG00000007041) #11	SGSM3 (ENSVVUG00000007031) #12	MRTFA (ENSVVUG00000006989) #13	MCHR1 (ENSVVUG00000006978) #14	ENSVVUG00000006921 #15	ENSVVUG00000006910	XPNPEP3 (ENSVVUG00000006901) #18	RBX1 (ENSVVUG00000006879) #19	EP300 (ENSVVUG00000003883) #20	L3MBTL2 (ENSVVUG00000003709) #22	CHADL (ENSVVUG00000003700) #23	RANGAP1 (ENSVVUG00000003690) #24	ZC3H7B (ENSVVUG00000003660) #25	TEF (ENSVVUG00000003655) #26	TOB2 (ENSVVUG00000003649) #27	PHF5A (ENSVVUG00000003634) #28	ACO2 (ENSVVUG00000003619) #29	POLR3H (ENSVVUG00000003543) #30	CSDC2 (ENSVVUG00000003532) #31	PMM1 (ENSVVUG00000003525) #32	DESI1 (ENSVVUG00000003501) #33	ENSVVUG00000003442 #34	ENSVVUG00000003430 #35	ENSVVUG00000003422 #36	MEI1 (ENSVVUG00000003315) #37
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Panthera	ANCESTRAL SPECIES		ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v.b.a #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00390000016988.a.a.a.b.a.b.a.b	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
lion	MODERN SPECIES	7	GRAP2 (ENSPLOG00000004745) #8	FAM83F (ENSPLOG00000004760) #9	TNRC6B (ENSPLOG00000004859) #10	ADSL (ENSPLOG00000005019) #11	SGSM3 (ENSPLOG00000005149) #12	ENSPLOG00000005209 #13	MCHR1 (ENSPLOG00000010815) #14	SLC25A17 (ENSPLOG00000010995) #15	ENSPLOG00000011208 #16	XPNPEP3 (ENSPLOG00000011320) #18	ENSPLOG00000011365	ENSPLOG00000011391	ENSPLOG00000011428	RBX1 (ENSPLOG00000011457) #19	EP300 (ENSPLOG00000011519) #20	L3MBTL2 (ENSPLOG00000011847) #22	CHADL (ENSPLOG00000012009) #23	RANGAP1 (ENSPLOG00000012100) #24	ZC3H7B (ENSPLOG00000012165) #25	TEF (ENSPLOG00000012484) #26	TOB2 (ENSPLOG00000012540) #27	PHF5A (ENSPLOG00000012553) #28	ACO2 (ENSPLOG00000012601) #29	POLR3H (ENSPLOG00000012763) #30	CSDC2 (ENSPLOG00000012880) #31	PMM1 (ENSPLOG00000012988) #32	DESI1 (ENSPLOG00000013041) #33	XRCC6 (ENSPLOG00000013139) #34	ENSPLOG00000013318 #35	ENSPLOG00000013474 #36	MEI1 (ENSPLOG00000013509) #37
leopard	MODERN SPECIES	13	CACNA1I (ENSPPRG00000022739)	ENTHD1 (ENSPPRG00000022103) #7	GRAP2 (ENSPPRG00000021941) #8	FAM83F (ENSPPRG00000021618) #9	TNRC6B (ENSPPRG00000017741) #10	ADSL (ENSPPRG00000014761) #11	SGSM3 (ENSPPRG00000013743) #12	ENSPPRG00000013444 #13	MCHR1 (ENSPPRG00000012224) #14	SLC25A17 (ENSPPRG00000011948) #15	ST13 (ENSPPRG00000010932) #16	XPNPEP3 (ENSPPRG00000010490) #18	ENSPPRG00000021477	RBX1 (ENSPPRG00000010370) #19	EP300 (ENSPPRG00000009984) #20	L3MBTL2 (ENSPPRG00000007633) #22	CHADL (ENSPPRG00000007361) #23	RANGAP1 (ENSPPRG00000007346) #24	ZC3H7B (ENSPPRG00000006647) #25	TEF (ENSPPRG00000006357) #26	ENSPPRG00000006258	TOB2 (ENSPPRG00000021427) #27	PHF5A (ENSPPRG00000006194) #28	ACO2 (ENSPPRG00000005996) #29	POLR3H (ENSPPRG00000005361) #30	CSDC2 (ENSPPRG00000005049) #31	PMM1 (ENSPPRG00000004746) #32	DESI1 (ENSPPRG00000004562) #33	XRCC6 (ENSPPRG00000004390) #34	SNU13 (ENSPPRG00000004114) #35	ENSPPRG00000003751 #36
Tiger	MODERN SPECIES	130	CACNA1I (ENSPTIG00000020353)	ENTHD1 (ENSPTIG00000021807) #7	GRAP2 (ENSPTIG00000021945) #8	FAM83F (ENSPTIG00000021999) #9	TNRC6B (ENSPTIG00000022064) #10	ADSL (ENSPTIG00000007894) #11	SGSM3 (ENSPTIG00000009612) #12	ENSPTIG00000010561 #13	MCHR1 (ENSPTIG00000012057) #14	SLC25A17 (ENSPTIG00000013463) #15	ST13 (ENSPTIG00000015971) #16	XPNPEP3 (ENSPTIG00000018765) #18	ENSPTIG00000003092	RBX1 (ENSPTIG00000020939) #19	EP300 (ENSPTIG00000021151) #20	L3MBTL2 (ENSPTIG00000010861) #22	RANGAP1 (ENSPTIG00000012387) #24	ZC3H7B (ENSPTIG00000013113) #25	TEF (ENSPTIG00000013705) #26	TOB2 (ENSPTIG00000004228) #27	PHF5A (ENSPTIG00000014228) #28	ACO2 (ENSPTIG00000014744) #29	POLR3H (ENSPTIG00000016286) #30	CSDC2 (ENSPTIG00000017894) #31	PMM1 (ENSPTIG00000018216) #32	XRCC6 (ENSPTIG00000019026) #34	DESI1 (ENSPTIG00000020182) #33	SNU13 (ENSPTIG00000021078) #35	ENSPTIG00000021403 #36	MEI1 (ENSPTIG00000021687) #37	CCDC134 (ENSPTIG00000003009)
Cat	MODERN SPECIES	238	GRAP2 (ENSFCAG00000013507) #8	FAM83F (ENSFCAG00000013509) #9	TNRC6B (ENSFCAG00000004791) #10	ADSL (ENSFCAG00000004798) #11	SGSM3 (ENSFCAG00000004800) #12	MRTFA (ENSFCAG00000004802) #13	MCHR1 (ENSFCAG00000015439) #14	SLC25A17 (ENSFCAG00000015440) #15	ST13 (ENSFCAG00000027002) #16	XPNPEP3 (ENSFCAG00000040722) #18	DNAJB7 (ENSFCAG00000015442)	ENSFCAG00000035664	RBX1 (ENSFCAG00000032024) #19	EP300 (ENSFCAG00000005002) #20	ENSFCAG00000026993	L3MBTL2 (ENSFCAG00000003668) #22	CHADL (ENSFCAG00000042374) #23	RANGAP1 (ENSFCAG00000003669) #24	ZC3H7B (ENSFCAG00000003670) #25	TEF (ENSFCAG00000032491) #26	TOB2 (ENSFCAG00000003675) #27	PHF5A (ENSFCAG00000003676) #28	ACO2 (ENSFCAG00000018526) #29	POLR3H (ENSFCAG00000006684) #30	CSDC2 (ENSFCAG00000038283) #31	PMM1 (ENSFCAG00000006685) #32	DESI1 (ENSFCAG00000033281) #33	XRCC6 (ENSFCAG00000018784) #34	SNU13 (ENSFCAG00000027664) #35	ENSFCAG00000025013 #36	MEI1 (ENSFCAG00000014285) #37
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Chiroptera	ANCESTRAL SPECIES	23	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Microchiroptera	ANCESTRAL SPECIES	8	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Greater horseshoe bat	MODERN SPECIES	1	RPS19BP1 (ENSRFEG00010001401)	CACNA1I (ENSRFEG00010001295)	ENTHD1 (ENSRFEG00010001236) #7	GRAP2 (ENSRFEG00010001214) #8	FAM83F (ENSRFEG00010001186) #9	TNRC6B (ENSRFEG00010000889) #10	ADSL (ENSRFEG00010000674) #11	SGSM3 (ENSRFEG00010000625) #12	MRTFA (ENSRFEG00010000566) #13	MCHR1 (ENSRFEG00010000490) #14	SLC25A17 (ENSRFEG00010000386) #15	ENSRFEG00010000294 #16	XPNPEP3 (ENSRFEG00010018976) #18	ENSRFEG00010018938 #19	EP300 (ENSRFEG00010018626) #20	L3MBTL2 (ENSRFEG00010018570) #22	CHADL (ENSRFEG00010018530) #23	RANGAP1 (ENSRFEG00010018251) #24	ZC3H7B (ENSRFEG00010018168) #25	TEF (ENSRFEG00010018137) #26	TOB2 (ENSRFEG00010018126) #27	PHF5A (ENSRFEG00010018076) #28	ACO2 (ENSRFEG00010017740) #29	POLR3H (ENSRFEG00010017658) #30	CSDC2 (ENSRFEG00010017619) #31	PMM1 (ENSRFEG00010017564) #32	DESI1 (ENSRFEG00010017478) #33	XRCC6 (ENSRFEG00010017302) #34	SNU13 (ENSRFEG00010017169) #35	MEI1 (ENSRFEG00010016537) #37	CCDC134 (ENSRFEG00010016458)
Microbat	MODERN SPECIES	1176	GRAP2 (ENSMLUG00000000549) #8	FAM83F (ENSMLUG00000015534) #9	TNRC6B (ENSMLUG00000008765) #10	ENSMLUG00000023638	ADSL (ENSMLUG00000005441) #11	SGSM3 (ENSMLUG00000005428) #12	MRTFA (ENSMLUG00000005421) #13	MCHR1 (ENSMLUG00000003571) #14	SLC25A17 (ENSMLUG00000007749) #15	ST13 (ENSMLUG00000007764) #16	DNAJB7 (ENSMLUG00000007809)	XPNPEP3 (ENSMLUG00000007787) #18	ENSMLUG00000007815 #19	ENSMLUG00000027424	EP300 (ENSMLUG00000014810) #20	L3MBTL2 (ENSMLUG00000008858) #22	CHADL (ENSMLUG00000008892) #23	RANGAP1 (ENSMLUG00000008908) #24	ZC3H7B (ENSMLUG00000003292) #25	TEF (ENSMLUG00000002459) #26	TOB2 (ENSMLUG00000002462) #27	PHF5A (ENSMLUG00000002465) #28	ACO2 (ENSMLUG00000002472) #29	POLR3H (ENSMLUG00000002487) #30	CSDC2 (ENSMLUG00000002495) #31	PMM1 (ENSMLUG00000002503) #32	DESI1 (ENSMLUG00000002511) #33	XRCC6 (ENSMLUG00000002516) #34	SNU13 (ENSMLUG00000002526) #35	ENSMLUG00000023695 #36	ENSMLUG00000026652 #36
Megabat	MODERN SPECIES	3648															EP300 (ENSPVAG00000012771) #20	L3MBTL2 (ENSPVAG00000012775) #22	CHADL (ENSPVAG00000012779) #23	RANGAP1 (ENSPVAG00000012781) #24
Equus	ANCESTRAL SPECIES	21	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.v #16	ENSGT00940000153657.A #18	ENSGT00940000163470	ENSGT00940000168153	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.z ##35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Donkey	MODERN SPECIES	11	ENTHD1 (ENSEASG00005005352) #7	GRAP2 (ENSEASG00005005345) #8	FAM83F (ENSEASG00005005338) #9	TNRC6B (ENSEASG00005005306) #10	ADSL (ENSEASG00005002850) #11	SGSM3 (ENSEASG00005002165) #12	MRTFA (ENSEASG00005002011) #13	MCHR1 (ENSEASG00005001962) #14	ENSEASG00005001954	SLC25A17 (ENSEASG00005001938) #15	ST13 (ENSEASG00005001769) #16	DNAJB7 (ENSEASG00005027112)	XPNPEP3 (ENSEASG00005001716) #18	ENSEASG00005024494	EP300 (ENSEASG00005001674) #20	L3MBTL2 (ENSEASG00005001665) #22	CHADL (ENSEASG00005001659) #23	RANGAP1 (ENSEASG00005001602) #24	ZC3H7B (ENSEASG00005001577) #25	TEF (ENSEASG00005001571) #26	TOB2 (ENSEASG00005031738) #27	ACO2 (ENSEASG00005001546) #29	POLR3H (ENSEASG00005001539) #30	CSDC2 (ENSEASG00005031038) #31	PMM1 (ENSEASG00005001528) #32	DESI1 (ENSEASG00005034212) #33	XRCC6 (ENSEASG00005001514) #34	ENSEASG00005036377 ##35	ENSEASG00005035516 #36	MEI1 (ENSEASG00005001488) #37	CCDC134 (ENSEASG00005001482)
Horse	MODERN SPECIES	20	CACNA1I (ENSECAG00000010223)	ENTHD1 (ENSECAG00000018973) #7	GRAP2 (ENSECAG00000019768) #8	FAM83F (ENSECAG00000009129) #9	TNRC6B (ENSECAG00000009759) #10	SGSM3 (ENSECAG00000022296) #12	MRTFA (ENSECAG00000013950) #13	MCHR1 (ENSECAG00000006511) #14	ENSECAG00000000999	SLC25A17 (ENSECAG00000008907) #15	ST13 (ENSECAG00000015838) #16	XPNPEP3 (ENSECAG00000018457) #18	DNAJB7 (ENSECAG00000050931)	RBX1 (ENSECAG00000021493)	EP300 (ENSECAG00000009327) #20	L3MBTL2 (ENSECAG00000010476) #22	CHADL (ENSECAG00000023119) #23	RANGAP1 (ENSECAG00000024092) #24	ZC3H7B (ENSECAG00000010103) #25	TEF (ENSECAG00000018137) #26	TOB2 (ENSECAG00000001192) #27	ACO2 (ENSECAG00000023762) #29	PHF5A (ENSECAG00000023225) #28	POLR3H (ENSECAG00000019715) #30	CSDC2 (ENSECAG00000022234) #31	PMM1 (ENSECAG00000000302) #32	DESI1 (ENSECAG00000011960) #33	XRCC6 (ENSECAG00000017563) #34	SNU13 (ENSECAG00000000375) ##35	ENSECAG00000055209 #36	MEI1 (ENSECAG00000000597) #37
Eulipotyphla	ANCESTRAL SPECIES	1854																ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23
Common shrew	MODERN SPECIES	91																ENSSARG00000009513 #22
Hedgehog	MODERN SPECIES	411																L3MBTL2 (ENSEEUG00000004477) #22	ENSEEUG00000004684 #23
Atlantogenata	ANCESTRAL SPECIES	36	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000168153	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00550000074840.z ##35	ENSGT00900000141218 #36
Xenarthra	ANCESTRAL SPECIES	81										ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000168153	ENSGT00940000153840.a.b #22	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.y.b #35	ENSGT00550000074840.y.a ##35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Sloth	MODERN SPECIES	275																ENSCHOG00000007020 #22
Armadillo	MODERN SPECIES	4707							DSG4 (ENSDNOG00000009671)	DSG1 (ENSDNOG00000019391)	DSC1 (ENSDNOG00000010752)	MCHR1 (ENSDNOG00000031210) #14	SLC25A17 (ENSDNOG00000013240) #15	ENSDNOG00000046244 #16	DNAJB7 (ENSDNOG00000040305)	XPNPEP3 (ENSDNOG00000046084) #18	ENSDNOG00000007595	L3MBTL2 (ENSDNOG00000032804) #22	ENSDNOG00000006672 #24	ZC3H7B (ENSDNOG00000007676) #25	TEF (ENSDNOG00000035257) #26	TOB2 (ENSDNOG00000016431) #27	PHF5A (ENSDNOG00000034362) #28	ACO2 (ENSDNOG00000018156) #29	POLR3H (ENSDNOG00000025527) #30	CSDC2 (ENSDNOG00000013639) #31	PMM1 (ENSDNOG00000036218) #32	DESI1 (ENSDNOG00000040575) #33	XRCC6 (ENSDNOG00000018356) #34	ENSDNOG00000044768 ##35	ENSDNOG00000032337 #36	MEI1 (ENSDNOG00000001581) #37	CCDC134 (ENSDNOG00000001589)
Afrotheria	ANCESTRAL SPECIES	33	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.z ##35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Afrotheria_a	ANCESTRAL SPECIES	33	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347 #16	ENSGT00940000163470	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840.z ##35	ENSGT00900000141218 #36	ENSGT00390000002077 #37
Elephant	MODERN SPECIES	544	CACNA1I (ENSLAFG00000006106)	ENTHD1 (ENSLAFG00000014942) #7	GRAP2 (ENSLAFG00000006957) #8	FAM83F (ENSLAFG00000016675) #9	TNRC6B (ENSLAFG00000014473) #10	ADSL (ENSLAFG00000014483) #11	SGSM3 (ENSLAFG00000001295) #12	MRTFA (ENSLAFG00000030989) #13	MCHR1 (ENSLAFG00000003353) #14	SLC25A17 (ENSLAFG00000011500) #15	ST13 (ENSLAFG00000007303) #16	DNAJB7 (ENSLAFG00000007309)	XPNPEP3 (ENSLAFG00000007310) #18	RBX1 (ENSLAFG00000008795) #19	EP300 (ENSLAFG00000012289) #20	L3MBTL2 (ENSLAFG00000012307) #22	CHADL (ENSLAFG00000030376) #23	RANGAP1 (ENSLAFG00000000314) #24	ZC3H7B (ENSLAFG00000013268) #25	TEF (ENSLAFG00000013151) #26	TOB2 (ENSLAFG00000027484) #27	PHF5A (ENSLAFG00000028840) #28	ACO2 (ENSLAFG00000006030) #29	POLR3H (ENSLAFG00000006033) #30	CSDC2 (ENSLAFG00000027155) #31	PMM1 (ENSLAFG00000002396) #32	DESI1 (ENSLAFG00000029375) #33	ENSLAFG00000011017 #34	SNU13 (ENSLAFG00000011026) ##35	ENSLAFG00000020576 #36	ENSLAFG00000027253 #36
Hyrax	MODERN SPECIES	233																L3MBTL2 (ENSPCAG00000015064) #22
Tenrec	MODERN SPECIES	366																L3MBTL2 (ENSETEG00000013728) #22	ENSETEG00000013733 #23
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b.m #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.s #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b.b #23	ENSGT00940000154464.b.a #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b.m #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Common wonbat	MODERN SPECIES	135	ENSVURG00010002916	CACNA1I (ENSVURG00010002838)	ENSVURG00010002821 #7	GRAP2 (ENSVURG00010002813) #8	FAM83F (ENSVURG00010002796) #9	TNRC6B (ENSVURG00010002621) #10	ADSL (ENSVURG00010002523) #11	SGSM3 (ENSVURG00010002459) #12	MRTFA (ENSVURG00010002430) #13	MCHR1 (ENSVURG00010002417) #14	SLC25A17 (ENSVURG00010002406) #15	ENSVURG00010002387 #16	XPNPEP3 (ENSVURG00010002164) #18	RBX1 (ENSVURG00010002126) #19	EP300 (ENSVURG00010002025) #20	L3MBTL2 (ENSVURG00010001993) #22	ENSVURG00010001987 #23	ENSVURG00010001895 #23	RANGAP1 (ENSVURG00010001814) #24	ZC3H7B (ENSVURG00010001772) #25	TEF (ENSVURG00010001759) #26	TOB2 (ENSVURG00010001752) #27	PHF5A (ENSVURG00010001740) #28	ACO2 (ENSVURG00010001726) #29	POLR3H (ENSVURG00010001680) #30	CSDC2 (ENSVURG00010001672) #31	ENSVURG00010001642 #32	DESI1 (ENSVURG00010001632) #33	XRCC6 (ENSVURG00010001619) #34	ENSVURG00010001607 #35	MEI1 (ENSVURG00010001558) #37
koala	MODERN SPECIES	13	ENSPCIG00000020377 #7	GRAP2 (ENSPCIG00000020373) #8	FAM83F (ENSPCIG00000020369) #9	ENSPCIG00000020347 #10	ADSL (ENSPCIG00000020341) #11	SGSM3 (ENSPCIG00000020329) #12	MRTFA (ENSPCIG00000020323) #13	ENSPCIG00000035658	MCHR1 (ENSPCIG00000033822) #14	SLC25A17 (ENSPCIG00000027567) #15	ENSPCIG00000027564 #16	XPNPEP3 (ENSPCIG00000027562) #18	RBX1 (ENSPCIG00000030999) #19	EP300 (ENSPCIG00000026468) #20	ENSPCIG00000036488	L3MBTL2 (ENSPCIG00000026428) #22	ENSPCIG00000026427 #23	ENSPCIG00000036708 #23	RANGAP1 (ENSPCIG00000026423) #24	ZC3H7B (ENSPCIG00000026417) #25	TEF (ENSPCIG00000026531) #26	TOB2 (ENSPCIG00000026533) #27	PHF5A (ENSPCIG00000031450) #28	ACO2 (ENSPCIG00000026414) #29	POLR3H (ENSPCIG00000026413) #30	CSDC2 (ENSPCIG00000033418) #31	PMM1 (ENSPCIG00000026411) #32	DESI1 (ENSPCIG00000026410) #33	XRCC6 (ENSPCIG00000026409) #34	SNU13 (ENSPCIG00000026408) #35	ENSPCIG00000026407
Wallaby	MODERN SPECIES	930																L3MBTL2 (ENSMEUG00000004496) #22
Tasmanian devil	MODERN SPECIES	4	CACNA1I (ENSSHAG00000012891)	ENSSHAG00000012062 #7	ENSSHAG00000028037	GRAP2 (ENSSHAG00000028881) #8	FAM83F (ENSSHAG00000011148) #9	TNRC6B (ENSSHAG00000009692) #10	ADSL (ENSSHAG00000009366) #11	SGSM3 (ENSSHAG00000025628) #12	MRTFA (ENSSHAG00000024452) #13	MCHR1 (ENSSHAG00000002986) #14	SLC25A17 (ENSSHAG00000030380) #15	ENSSHAG00000000319 #16	XPNPEP3 (ENSSHAG00000003507) #18	ENSSHAG00000024914 #19	EP300 (ENSSHAG00000006684) #20	L3MBTL2 (ENSSHAG00000025122) #22	ENSSHAG00000007840 #23	ENSSHAG00000008085 #23	RANGAP1 (ENSSHAG00000008179) #24	ZC3H7B (ENSSHAG00000008653) #25	TEF (ENSSHAG00000020958) #26	TOB2 (ENSSHAG00000030650) #27	PHF5A (ENSSHAG00000025116) #28	ACO2 (ENSSHAG00000010092) #29	POLR3H (ENSSHAG00000010196) #30	CSDC2 (ENSSHAG00000029872) #31	PMM1 (ENSSHAG00000025713) #32	DESI1 (ENSSHAG00000029515) #33	XRCC6 (ENSSHAG00000010790) #34	ENSSHAG00000024404 #36	MEI1 (ENSSHAG00000011079) #37
Opossum	MODERN SPECIES	7	DNM1L (ENSMODG00000012763)	ENSMODG00000012921	PKP2 (ENSMODG00000012782)	CNTN1 (ENSMODG00000012850)	ENSMODG00000038819	ENSMODG00000012885	ENSMODG00000048400	ADSL (ENSMODG00000012930) #11	ENSMODG00000012937 #13	MCHR1 (ENSMODG00000045226) #14	SLC25A17 (ENSMODG00000013036) #15	ENSMODG00000013042 #16	XPNPEP3 (ENSMODG00000013052) #18	ENSMODG00000013054	EP300 (ENSMODG00000013073) #20	L3MBTL2 (ENSMODG00000013083) #22	ENSMODG00000028924	RANGAP1 (ENSMODG00000013097) #24	NUP50 (ENSMODG00000007116)	ENSMODG00000048389	UPK3A (ENSMODG00000007145)	ENSMODG00000007167	SMC1B (ENSMODG00000007253)	RIBC2 (ENSMODG00000007265)	FBLN1 (ENSMODG00000007284)	ENSMODG00000007304	WNT7B (ENSMODG00000007327)	ENSMODG00000007333	ENSMODG00000024114	PPARA (ENSMODG00000007365)	CDPF1 (ENSMODG00000024113)
Platypus	MODERN SPECIES	5	CACNA1I (ENSOANG00000014664)	ENSOANG00000014666 #7	GRAP2 (ENSOANG00000014667) #8	ENSOANG00000050214 #9	TNRC6B (ENSOANG00000014668) #10	ADSL (ENSOANG00000014669) #11	SGSM3 (ENSOANG00000008380) #12	ENSOANG00000013468 ##13	MRTFA (ENSOANG00000044653) #13	MCHR1 (ENSOANG00000014672) #14	SLC25A17 (ENSOANG00000049591) #15	ST13 (ENSOANG00000014676) #16	XPNPEP3 (ENSOANG00000014678) #18	RBX1 (ENSOANG00000014675) #19	EP300 (ENSOANG00000014679) #20	L3MBTL2 (ENSOANG00000013943) #22	CHADL (ENSOANG00000036728) #23	RANGAP1 (ENSOANG00000013941) #24	ZC3H7B (ENSOANG00000008962) #25	TEF (ENSOANG00000011535) #26	ENSOANG00000009031 #27	PHF5A (ENSOANG00000044295) #28	ACO2 (ENSOANG00000003550) #29	POLR3H (ENSOANG00000004374) #30	CSDC2 (ENSOANG00000004309) #31	PMM1 (ENSOANG00000050238) #32	DESI1 (ENSOANG00000044638) #33	XRCC6 (ENSOANG00000011328) #34	SNU13 (ENSOANG00000011327) #35	MEI1 (ENSOANG00000004117) #37	ENSOANG00000042179
Sauria	ANCESTRAL SPECIES	4	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Archelosauria	ANCESTRAL SPECIES	3	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Archosauria	ANCESTRAL SPECIES	4	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Aves	ANCESTRAL SPECIES	1	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Neognathae	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Neognathae_b	ANCESTRAL SPECIES	2	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Neognathae_c	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Golden eagle	MODERN SPECIES	8	ATF4 (ENSACCG00020012213)	RPS19BP1 (ENSACCG00020012199)	CACNA1I (ENSACCG00020011911)	ENSACCG00020011462 #8	ENSACCG00020011449 #8	FAM83F (ENSACCG00020011437) #9	TNRC6B (ENSACCG00020011399) #10	ADSL (ENSACCG00020011368) #11	SGSM3 (ENSACCG00020011355) #12	MRTFA (ENSACCG00020011330) #13	SLC25A17 (ENSACCG00020011303) #15	ST13 (ENSACCG00020011290) #16	XPNPEP3 (ENSACCG00020011272) #18	RBX1 (ENSACCG00020011253) #19	EP300 (ENSACCG00020011223) #20	L3MBTL2 (ENSACCG00020011187) #22	CHADL (ENSACCG00020011167) #23	RANGAP1 (ENSACCG00020011151) #24	ZC3H7B (ENSACCG00020011103) #25	TEF (ENSACCG00020011092) #26	TOB2 (ENSACCG00020011079) #27	PHF5A (ENSACCG00020011070) #28	ACO2 (ENSACCG00020011045) #29	POLR3H (ENSACCG00020011032) #30	CSDC2 (ENSACCG00020011025) #31	PMM1 (ENSACCG00020010995) #32	DESI1 (ENSACCG00020010985) #33	XRCC6 (ENSACCG00020010932) #34	SNU13 (ENSACCG00020010839) #35	MEI1 (ENSACCG00020010827) #37	CCDC134 (ENSACCG00020010797)
Kakapo	MODERN SPECIES	20	CACNA1I (ENSSHBG00005002245)	ENSSHBG00005003047	ENSSHBG00005003070	GRAP2 (ENSSHBG00005003082) #8	FAM83F (ENSSHBG00005003111) #9	ENSSHBG00005003140 #10	ENSSHBG00005003174 #10	ADSL (ENSSHBG00005003214) #11	SGSM3 (ENSSHBG00005003400) #12	MRTFA (ENSSHBG00005003736) #13	SLC25A17 (ENSSHBG00005003758) #15	ST13 (ENSSHBG00005003778) #16	XPNPEP3 (ENSSHBG00005003788) #18	RBX1 (ENSSHBG00005003797) #19	EP300 (ENSSHBG00005003877) #20	L3MBTL2 (ENSSHBG00005003962) #22	CHADL (ENSSHBG00005003983) #23	RANGAP1 (ENSSHBG00005003995) #24	ZC3H7B (ENSSHBG00005004011) #25	TEF (ENSSHBG00005004030) #26	TOB2 (ENSSHBG00005004039) #27	PHF5A (ENSSHBG00005004044) #28	ACO2 (ENSSHBG00005004055) #29	POLR3H (ENSSHBG00005004066) #30	CSDC2 (ENSSHBG00005004072) #31	PMM1 (ENSSHBG00005004080) #32	DESI1 (ENSSHBG00005004088) #33	XRCC6 (ENSSHBG00005004097) #34	SNU13 (ENSSHBG00005004108) #35	ENSSHBG00005004117 #37	ENSSHBG00005004126 #37
Passeriformes	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Great tit	MODERN SPECIES	10	MIEF1 (ENSPMJG00000007725)	ENSPMJG00000007720	ATF4 (ENSPMJG00000007715)	CACNA1I (ENSPMJG00000007671)	GRAP2 (ENSPMJG00000007667) #8	FAM83F (ENSPMJG00000007663) #9	TNRC6B (ENSPMJG00000007596) #10	ADSL (ENSPMJG00000007593) #11	SGSM3 (ENSPMJG00000007584) #12	MRTFA (ENSPMJG00000007562) #13	SLC25A17 (ENSPMJG00000007471) #15	ST13 (ENSPMJG00000007467) #16	XPNPEP3 (ENSPMJG00000007454) #18	RBX1 (ENSPMJG00000007453) #19	EP300 (ENSPMJG00000005447) #20	L3MBTL2 (ENSPMJG00000005319) #22	CHADL (ENSPMJG00000005316) #23	RANGAP1 (ENSPMJG00000004991) #24	ZC3H7B (ENSPMJG00000004469) #25	TEF (ENSPMJG00000004460) #26	TOB2 (ENSPMJG00000004458) #27	PHF5A (ENSPMJG00000004457) #28	ACO2 (ENSPMJG00000004344) #29	POLR3H (ENSPMJG00000004341) #30	CSDC2 (ENSPMJG00000004340) #31	PMM1 (ENSPMJG00000003708) #32	DESI1 (ENSPMJG00000003706) #33	XRCC6 (ENSPMJG00000003281) #34	SNU13 (ENSPMJG00000003278) #35	MEI1 (ENSPMJG00000003253) #37	CCDC134 (ENSPMJG00000003161)
Passeriformes_d	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Flycatcher	MODERN SPECIES	10	MIEF1 (ENSFALG00000026637)	ATF4 (ENSFALG00000028026)	ENSFALG00000025172	CACNA1I (ENSFALG00000012255)	GRAP2 (ENSFALG00000027504) #8	FAM83F (ENSFALG00000012211) #9	TNRC6B (ENSFALG00000012195) #10	ADSL (ENSFALG00000012164) #11	SGSM3 (ENSFALG00000012148) #12	MRTFA (ENSFALG00000026521) #13	ENSFALG00000025665	SLC25A17 (ENSFALG00000027046) #15	XPNPEP3 (ENSFALG00000025613) #18	RBX1 (ENSFALG00000012051) #19	EP300 (ENSFALG00000012042) #20	L3MBTL2 (ENSFALG00000012014) #22	CHADL (ENSFALG00000011997) #23	RANGAP1 (ENSFALG00000011980) #24	ZC3H7B (ENSFALG00000011968) #25	TEF (ENSFALG00000011967) #26	TOB2 (ENSFALG00000011965) #27	PHF5A (ENSFALG00000025716) #28	POLR3H (ENSFALG00000011952) #30	CSDC2 (ENSFALG00000011950) #31	PMM1 (ENSFALG00000029020) #32	ENSFALG00000024026 ##32	ENSFALG00000027725 #33	ENSFALG00000028431 #33	XRCC6 (ENSFALG00000011908) #34	SNU13 (ENSFALG00000028405) #35	MEI1 (ENSFALG00000011849) #37
Passeriformes_g	ANCESTRAL SPECIES	4	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Medium ground finch	MODERN SPECIES	37	ATF4 (ENSGFOG00000005102)	RPS19BP1 (ENSGFOG00000005104)	ENSGFOG00000005120	GRAP2 (ENSGFOG00000005145) #8	FAM83F (ENSGFOG00000005221) #9	TNRC6B (ENSGFOG00000005299) #10	ENSGFOG00000005347	ADSL (ENSGFOG00000005355) #11	SGSM3 (ENSGFOG00000005382) #12	MRTFA (ENSGFOG00000005485) #13	SLC25A17 (ENSGFOG00000005521) #15	ST13 (ENSGFOG00000005528) #16	XPNPEP3 (ENSGFOG00000005541) #18	RBX1 (ENSGFOG00000005560) #19	EP300 (ENSGFOG00000005659) #20	L3MBTL2 (ENSGFOG00000007896) #22	CHADL (ENSGFOG00000007916) #23	RANGAP1 (ENSGFOG00000007926) #24	ZC3H7B (ENSGFOG00000007942) #25	TEF (ENSGFOG00000007970) #26	TOB2 (ENSGFOG00000007976) #27	PHF5A (ENSGFOG00000007986) #28	ACO2 (ENSGFOG00000007995) #29	POLR3H (ENSGFOG00000008010) #30	CSDC2 (ENSGFOG00000008013) #31	PMM1 (ENSGFOG00000008019) #32	DESI1 (ENSGFOG00000008027) #33	XRCC6 (ENSGFOG00000008034) #34	SNU13 (ENSGFOG00000008044) #35	ENSGFOG00000008048 #37	ENSGFOG00000008064 #37
Passeroidea	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00940000179237	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a.b #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Zebra finch	MODERN SPECIES	11	MIEF1 (ENSTGUG00000010229)	ATF4 (ENSTGUG00000010225)	RPS19BP1 (ENSTGUG00000010217)	CACNA1I (ENSTGUG00000010198)	GRAP2 (ENSTGUG00000024825) #8	FAM83F (ENSTGUG00000010169) #9	TNRC6B (ENSTGUG00000010138) #10	ADSL (ENSTGUG00000010111) #11	SGSM3 (ENSTGUG00000010093) #12	MRTFA (ENSTGUG00000010083) #13	SLC25A17 (ENSTGUG00000010069) #15	ST13 (ENSTGUG00000010046) #16	XPNPEP3 (ENSTGUG00000010038) #18	RBX1 (ENSTGUG00000010035) #19	EP300 (ENSTGUG00000010016) #20	L3MBTL2 (ENSTGUG00000010000) #22	RANGAP1 (ENSTGUG00000009969) #24	ZC3H7B (ENSTGUG00000009946) #25	TEF (ENSTGUG00000009944) #26	TOB2 (ENSTGUG00000009941) #27	PHF5A (ENSTGUG00000025618) #28	ACO2 (ENSTGUG00000009907) #29	POLR3H (ENSTGUG00000009901) #30	CSDC2 (ENSTGUG00000019504) #31	PMM1 (ENSTGUG00000009884) #32	DESI1 (ENSTGUG00000023310) #33	XRCC6 (ENSTGUG00000009852) #34	SNU13 (ENSTGUG00000021658) #35	MEI1 (ENSTGUG00000009814) #37	CCDC134 (ENSTGUG00000009807)	SREBF2 (ENSTGUG00000009772)
Common canary	MODERN SPECIES	6	ATF4 (ENSSCAG00000005159)	ENSSCAG00000005162	CACNA1I (ENSSCAG00000005203)	GRAP2 (ENSSCAG00000005373) #8	FAM83F (ENSSCAG00000005376) #9	TNRC6B (ENSSCAG00000005385) #10	ENSSCAG00000005401	ADSL (ENSSCAG00000005406) #11	SGSM3 (ENSSCAG00000005414) #12	MRTFA (ENSSCAG00000005424) #13	SLC25A17 (ENSSCAG00000005430) #15	ST13 (ENSSCAG00000005434) #16	XPNPEP3 (ENSSCAG00000005442) #18	RBX1 (ENSSCAG00000005448) #19	EP300 (ENSSCAG00000005456) #20	L3MBTL2 (ENSSCAG00000005464) #22	CHADL (ENSSCAG00000005472) #23	RANGAP1 (ENSSCAG00000005490) #24	ZC3H7B (ENSSCAG00000005561) #25	TEF (ENSSCAG00000005576) #26	TOB2 (ENSSCAG00000005587) #27	PHF5A (ENSSCAG00000005591) #28	ACO2 (ENSSCAG00000005597) #29	POLR3H (ENSSCAG00000005603) #30	CSDC2 (ENSSCAG00000005611) #31	PMM1 (ENSSCAG00000005616) #32	DESI1 (ENSSCAG00000005622) #33	XRCC6 (ENSSCAG00000005654) #34	SNU13 (ENSSCAG00000005802) #35	MEI1 (ENSSCAG00000005808) #37	SREBF2 (ENSSCAG00000005828)
Galloanserae	ANCESTRAL SPECIES	3	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000013127.a	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Chicken	MODERN SPECIES		MIEF1 (ENSGALG00010012426)	ATF4 (ENSGALG00010012407)	RPS19BP1 (ENSGALG00010012378)	CACNA1I (ENSGALG00010012410)	GRAP2 (ENSGALG00010013194) #8	FAM83F (ENSGALG00010013164) #9	TNRC6B (ENSGALG00010013146) #10	ADSL (ENSGALG00010013095) #11	SGSM3 (ENSGALG00010013084) #12	MRTFA (ENSGALG00010013053) #13	SLC25A17 (ENSGALG00010012962) #15	ST13P5 (ENSGALG00010012948) #16	XPNPEP3 (ENSGALG00010012910) #18	RBX1 (ENSGALG00010012900) #19	EP300 (ENSGALG00010012865) #20	L3MBTL2 (ENSGALG00010012841) #22	CHADL (ENSGALG00010012832) #23	RANGAP1 (ENSGALG00010012819) #24	ZC3H7B (ENSGALG00010012797) #25	TEF (ENSGALG00010012786) #26	TOB2 (ENSGALG00010012747) #27	PHF5A (ENSGALG00010012765) #28	ACO2 (ENSGALG00010012720) #29	POLR3H (ENSGALG00010010891) #30	CSDC2 (ENSGALG00010010856) #31	PMM1 (ENSGALG00010010841) #32	DESI1 (ENSGALG00010010831) #33	XRCC6 (ENSGALG00010010792) #34	ENSGALG00010010771	MEI1 (ENSGALG00010010761) #37	CCDC134 (ENSGALG00010010740)
Turkey	MODERN SPECIES		RPS19BP1 (ENSMGAG00000012407)	CACNA1I (ENSMGAG00000012353)	GRAP2 (ENSMGAG00000012343) #8	FAM83F (ENSMGAG00000012348) #9	ENSMGAG00000012333 #10	ENSMGAG00000021539 #10	ADSL (ENSMGAG00000012313) #11	SGSM3 (ENSMGAG00000012289) #12	MRTFA (ENSMGAG00000012307) #13	ENSMGAG00000016396	SLC25A17 (ENSMGAG00000012312) #15	ST13 (ENSMGAG00000012265) #16	XPNPEP3 (ENSMGAG00000012279) #18	RBX1 (ENSMGAG00000012285) #19	EP300 (ENSMGAG00000012170) #20	L3MBTL2 (ENSMGAG00000012189) #22	CHADL (ENSMGAG00000012213) #23	RANGAP1 (ENSMGAG00000012215) #24	ZC3H7B (ENSMGAG00000012234) #25	TEF (ENSMGAG00000012262) #26	TOB2 (ENSMGAG00000015716) #27	PHF5A (ENSMGAG00000012169) #28	POLR3H (ENSMGAG00000012126) #30	CSDC2 (ENSMGAG00000012131) #31	ENSMGAG00000012110 #29	PMM1 (ENSMGAG00000012134) #32	DESI1 (ENSMGAG00000012139) #33	XRCC6 (ENSMGAG00000012146) #34	SNU13 (ENSMGAG00000012155) #35	MEI1 (ENSMGAG00000012159) #37	CCDC134 (ENSMGAG00000012164)
Japanese quail	MODERN SPECIES		ATF4 (ENSCJPG00005013316)	RPS19BP1 (ENSCJPG00005013315)	CACNA1I (ENSCJPG00005010236)	GRAP2 (ENSCJPG00005010214) #8	FAM83F (ENSCJPG00005010213) #9	TNRC6B (ENSCJPG00005010212) #10	ADSL (ENSCJPG00005009384) #11	SGSM3 (ENSCJPG00005009373) #12	MRTFA (ENSCJPG00005009371) #13	ENSCJPG00005009364 #15	ENSCJPG00005009360 #15	ST13 (ENSCJPG00005009358) #16	XPNPEP3 (ENSCJPG00005009357) #18	RBX1 (ENSCJPG00005009355) #19	EP300 (ENSCJPG00005009352) #20	L3MBTL2 (ENSCJPG00005009248) #22	ENSCJPG00005009247	RANGAP1 (ENSCJPG00005009109) #24	ZC3H7B (ENSCJPG00005009108) #25	TEF (ENSCJPG00005009107) #26	TOB2 (ENSCJPG00005009106) #27	PHF5A (ENSCJPG00005009105) #28	ACO2 (ENSCJPG00005009104) #29	POLR3H (ENSCJPG00005009103) #30	CSDC2 (ENSCJPG00005009102) #31	ENSCJPG00005009101 ##32	DESI1 (ENSCJPG00005009100) #33	XRCC6 (ENSCJPG00005009099) #34	SNU13 (ENSCJPG00005009098) #35	MEI1 (ENSCJPG00005009097) #37	CCDC134 (ENSCJPG00005009096)
Anatidae	ANCESTRAL SPECIES	8	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22
Pink-footed goose	MODERN SPECIES	58	MIEF1 (ENSABRG00000016647)	ATF4 (ENSABRG00000016646)	RPS19BP1 (ENSABRG00000016643)	CACNA1I (ENSABRG00000016632)	GRAP2 (ENSABRG00000016616) #8	FAM83F (ENSABRG00000016603) #9	TNRC6B (ENSABRG00000016563) #10	ADSL (ENSABRG00000016444) #11	SGSM3 (ENSABRG00000016393) #12	MRTFA (ENSABRG00000016352) #13	SLC25A17 (ENSABRG00000016324) #15	ST13 (ENSABRG00000016245) #16	XPNPEP3 (ENSABRG00000016221) #18	RBX1 (ENSABRG00000016215) #19	EP300 (ENSABRG00000016186) #20	L3MBTL2 (ENSABRG00000016104) #22
Duck	MODERN SPECIES		ATF4 (ENSAPLG00000001773)	RPS19BP1 (ENSAPLG00000015585)	ENSAPLG00000017412	CACNA1I (ENSAPLG00000009947)	GRAP2 (ENSAPLG00000009697) #8	FAM83F (ENSAPLG00000009665) #9	TNRC6B (ENSAPLG00000009347) #10	ADSL (ENSAPLG00000008986) #11	SGSM3 (ENSAPLG00000014613) #12	MRTFA (ENSAPLG00000014434) #13	SLC25A17 (ENSAPLG00000009624) #15	ST13 (ENSAPLG00000009644) #16	XPNPEP3 (ENSAPLG00000010243) #18	RBX1 (ENSAPLG00000010445) #19	EP300 (ENSAPLG00000010504) #20	L3MBTL2 (ENSAPLG00000003563) #22	ACSS3 (ENSAPLG00000006860)	ENSAPLG00000016884	PPFIA2 (ENSAPLG00000005353)	CCDC59 (ENSAPLG00000007839)	METTL25 (ENSAPLG00000007999)	TMTC2 (ENSAPLG00000013866)	ENSAPLG00000018511	SLC6A15 (ENSAPLG00000015250)	TSPAN19 (ENSAPLG00000021214)	ENSAPLG00000000574	ALX1 (ENSAPLG00000001231)	RASSF9 (ENSAPLG00000001547)	NTS (ENSAPLG00000018978)	MGAT4C (ENSAPLG00000002108)	ENSAPLG00000024557
African ostrich	MODERN SPECIES	282	MIEF1 (ENSSCUG00000000711)	ATF4 (ENSSCUG00000000713)	RPS19BP1 (ENSSCUG00000000714)	CACNA1I (ENSSCUG00000000784)	GRAP2 (ENSSCUG00000000841) #8	FAM83F (ENSSCUG00000000847) #9	TNRC6B (ENSSCUG00000000852) #10	ADSL (ENSSCUG00000000862) #11	SGSM3 (ENSSCUG00000000867) #12	MRTFA (ENSSCUG00000000871) #13	SLC25A17 (ENSSCUG00000000874) #15	ENSSCUG00000000875 #16	XPNPEP3 (ENSSCUG00000000876) #18	RBX1 (ENSSCUG00000000878) #19	EP300 (ENSSCUG00000000881) #20	L3MBTL2 (ENSSCUG00000000883) #22	CHADL (ENSSCUG00000000887) #23	RANGAP1 (ENSSCUG00000000888) #24	ZC3H7B (ENSSCUG00000000894) #25	TEF (ENSSCUG00000000897) #26	TOB2 (ENSSCUG00000000898) #27	PHF5A (ENSSCUG00000000899) #28	ACO2 (ENSSCUG00000000901) #29	POLR3H (ENSSCUG00000000902) #30	PMM1 (ENSSCUG00000000905) #32	DESI1 (ENSSCUG00000000906) #33	MEI1 (ENSSCUG00000000908) #37	SNU13 (ENSSCUG00000000916) #35	CCDC134 (ENSSCUG00000000917)	SREBF2 (ENSSCUG00000000927)	TNFRSF13C (ENSSCUG00000000930)
Australian saltwater crocodile	MODERN SPECIES	49	RPS19BP1 (ENSCPRG00005019038)	CACNA1I (ENSCPRG00005019040)	ENSCPRG00005019042 #7	GRAP2 (ENSCPRG00005019044) #8	FAM83F (ENSCPRG00005019045) #9	TNRC6B (ENSCPRG00005019047) #10	ADSL (ENSCPRG00005019048) #11	SGSM3 (ENSCPRG00005019049) #12	MRTFA (ENSCPRG00005019050) #13	MCHR1 (ENSCPRG00005019051) #14	SLC25A17 (ENSCPRG00005019052) #15	ENSCPRG00005019053 #16	XPNPEP3 (ENSCPRG00005019054) #18	RBX1 (ENSCPRG00005019056) #19	EP300 (ENSCPRG00005019057) #20	L3MBTL2 (ENSCPRG00005019058) #22	CHADL (ENSCPRG00005019059) #23	ENSCPRG00005019060	RANGAP1 (ENSCPRG00005019061) #24	ZC3H7B (ENSCPRG00005019062) #25	TEF (ENSCPRG00005019063) #26	TOB2 (ENSCPRG00005019065) #27	PHF5A (ENSCPRG00005019066) #28	ACO2 (ENSCPRG00005019067) #29	POLR3H (ENSCPRG00005019068) #30	CSDC2 (ENSCPRG00005019069) #31	PMM1 (ENSCPRG00005019070) #32	DESI1 (ENSCPRG00005019071) #33	ENSCPRG00005019072	XRCC6 (ENSCPRG00005019073) #34	ENSCPRG00005019074 #35
Cryptodira	ANCESTRAL SPECIES	10	ENSGT00390000016774	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Testudinoidea	ANCESTRAL SPECIES	4	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Emydidae	ANCESTRAL SPECIES	5	ENSGT01000000215591	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00940000154272.B #14	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Three-toed box turtle	MODERN SPECIES	118	RPS19BP1 (ENSTMTG00000005007)	CACNA1I (ENSTMTG00000004892)	ENSTMTG00000004866 #7	GRAP2 (ENSTMTG00000004819) #8	FAM83F (ENSTMTG00000004780) #9	TNRC6B (ENSTMTG00000004079) #10	ADSL (ENSTMTG00000003987) #11	SGSM3 (ENSTMTG00000003933) #12	MRTFA (ENSTMTG00000003895) #13	MCHR1 (ENSTMTG00000003871) #14	SLC25A17 (ENSTMTG00000003852) #15	ENSTMTG00000003825 #16	XPNPEP3 (ENSTMTG00000003795) #18	RBX1 (ENSTMTG00000003773) #19	EP300 (ENSTMTG00000003703) #20	L3MBTL2 (ENSTMTG00000003620) #22	CHADL (ENSTMTG00000003593) #23	ENSTMTG00000003576	RANGAP1 (ENSTMTG00000003408) #24	ZC3H7B (ENSTMTG00000003337) #25	ENSTMTG00000003315	TEF (ENSTMTG00000003303) #26	TOB2 (ENSTMTG00000003292) #27	PHF5A (ENSTMTG00000003280) #28	ACO2 (ENSTMTG00000003259) #29	POLR3H (ENSTMTG00000003249) #30	CSDC2 (ENSTMTG00000008503) #31	PMM1 (ENSTMTG00000008492) #32	DESI1 (ENSTMTG00000008481) #33	XRCC6 (ENSTMTG00000008458) #34	SNU13 (ENSTMTG00000008448) #35
painted turtle	MODERN SPECIES	2381	CACNA1I (ENSCPBG00000022952)	ENSCPBG00000022949 #7	GRAP2 (ENSCPBG00000022944) #8	FAM83F (ENSCPBG00000022941) #9	ENSCPBG00000022940	TNRC6B (ENSCPBG00000022932) #10	ADSL (ENSCPBG00000022923) #11	SGSM3 (ENSCPBG00000022918) #12	MCHR1 (ENSCPBG00000022916) #14	MRTFA (ENSCPBG00000022902) #13	ENSCPBG00000022896 #16	XPNPEP3 (ENSCPBG00000022890) #18	RBX1 (ENSCPBG00000022886) #19	EP300 (ENSCPBG00000021241) #20	CHADL (ENSCPBG00000021171) #23	L3MBTL2 (ENSCPBG00000021168) #22	ENSCPBG00000021162	RANGAP1 (ENSCPBG00000020589) #24	ZC3H7B (ENSCPBG00000020560) #25	TEF (ENSCPBG00000020555) #26	PHF5A (ENSCPBG00000020547) #28	ACO2 (ENSCPBG00000020545) #29	POLR3H (ENSCPBG00000020544) #30	PMM1 (ENSCPBG00000020543) #32	CSDC2 (ENSCPBG00000020542) #31	DESI1 (ENSCPBG00000020538) #33	XRCC6 (ENSCPBG00000020535) #34	SNU13 (ENSCPBG00000020533) #35	CCDC134 (ENSCPBG00000020531)	SREBF2 (ENSCPBG00000020529)	ENSCPBG00000020528
Testudinidae	ANCESTRAL SPECIES	14	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37
Abingdon island giant tortoise	MODERN SPECIES	88	CACNA1I (ENSCABG00000022965)	ENSCABG00000022964 #7	GRAP2 (ENSCABG00000022963) #8	FAM83F (ENSCABG00000022961) #9	TNRC6B (ENSCABG00000022960) #10	ADSL (ENSCABG00000022959) #11	ENSCABG00000022958	SGSM3 (ENSCABG00000022956) #12	ENSCABG00000022955 #13	ENSCABG00000022954 #13	SLC25A17 (ENSCABG00000022953) #15	ENSCABG00000022946 #16	XPNPEP3 (ENSCABG00000022941) #18	RBX1 (ENSCABG00000022939) #19	EP300 (ENSCABG00000022920) #20	L3MBTL2 (ENSCABG00000022907) #22	CHADL (ENSCABG00000022905) #23	ENSCABG00000022903	RANGAP1 (ENSCABG00000022902) #24	ZC3H7B (ENSCABG00000022901) #25	TEF (ENSCABG00000022900) #26	TOB2 (ENSCABG00000022899) #27	PHF5A (ENSCABG00000022898) #28	ACO2 (ENSCABG00000022897) #29	POLR3H (ENSCABG00000022894) #30	CSDC2 (ENSCABG00000022893) #31	PMM1 (ENSCABG00000022891) #32	DESI1 (ENSCABG00000022890) #33	XRCC6 (ENSCABG00000022888) #34	SNU13 (ENSCABG00000022883) #35	ENSCABG00000022882 #37
Goode s thornscrub tortoise	MODERN SPECIES		ATF4 (ENSGEVG00005001614)	RPS19BP1 (ENSGEVG00005001626)	CACNA1I (ENSGEVG00005001697)	ENSGEVG00005001812 #7	GRAP2 (ENSGEVG00005001821) #8	FAM83F (ENSGEVG00005001832) #9	TNRC6B (ENSGEVG00005001864) #10	ADSL (ENSGEVG00005001950) #11	SGSM3 (ENSGEVG00005001983) #12	MRTFA (ENSGEVG00005002013) #13	SLC25A17 (ENSGEVG00005002031) #15	ENSGEVG00005002059 #16	XPNPEP3 (ENSGEVG00005002096) #18	RBX1 (ENSGEVG00005002125) #19	EP300 (ENSGEVG00005002140) #20	L3MBTL2 (ENSGEVG00005002180) #22	CHADL (ENSGEVG00005002219) #23	ENSGEVG00005002229	RANGAP1 (ENSGEVG00005002246) #24	ZC3H7B (ENSGEVG00005002265) #25	TEF (ENSGEVG00005002306) #26	ENSGEVG00005002321	TOB2 (ENSGEVG00005002327) #27	PHF5A (ENSGEVG00005002334) #28	ACO2 (ENSGEVG00005002343) #29	POLR3H (ENSGEVG00005002371) #30	CSDC2 (ENSGEVG00005002384) #31	PMM1 (ENSGEVG00005002400) #32	XRCC6 (ENSGEVG00005002426) #34	DESI1 (ENSGEVG00005002450) #33	SNU13 (ENSGEVG00005000024) #35
Chinese turtle	MODERN SPECIES	1164				ENSPSIG00000004436	THBS1 (ENSPSIG00000004513)	ENSPSIG00000001693	TNRC6B (ENSPSIG00000005318) #10	ADSL (ENSPSIG00000005445) #11	SGSM3 (ENSPSIG00000006114) #12	MRTFA (ENSPSIG00000007042) #13	SLC25A17 (ENSPSIG00000004546) #15	ENSPSIG00000004553 #16	XPNPEP3 (ENSPSIG00000004711) #18	RBX1 (ENSPSIG00000004730) #19	EP300 (ENSPSIG00000004772) #20	L3MBTL2 (ENSPSIG00000005049) #22	CHADL (ENSPSIG00000005321) #23	ENSPSIG00000005447	RANGAP1 (ENSPSIG00000005458) #24	ZC3H7B (ENSPSIG00000005743) #25	TEF (ENSPSIG00000006835) #26	TOB2 (ENSPSIG00000007002) #27	PHF5A (ENSPSIG00000007014) #28	ACO2 (ENSPSIG00000007077) #29	POLR3H (ENSPSIG00000008284) #30	CSDC2 (ENSPSIG00000008362) #31	PMM1 (ENSPSIG00000008638) #32	DESI1 (ENSPSIG00000008686) #33	ENSPSIG00000008759 #34
Lepidosauria	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Episquamata	ANCESTRAL SPECIES	3	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339
Laterata	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307.f #8	ENSGT00940000157307.e #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00940000161826.C	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164
Common wall lizard	DUPLICATION
Common wall lizard	MODERN SPECIES	1	CACNA1I (ENSPMRG00000021848)	ENTHD1 (ENSPMRG00000021657) #7	GRAP2 (ENSPMRG00000021650) #8	ENSPMRG00000021649	FAM83F (ENSPMRG00000021645) #9	TNRC6B (ENSPMRG00000021642) #10	ADSL (ENSPMRG00000021633) #11	SGSM3 (ENSPMRG00000021604) #12	MRTFA (ENSPMRG00000021490) #13	ENSPMRG00000021454	SLC25A17 (ENSPMRG00000021442) #15	ENSPMRG00000021430 #16	XPNPEP3 (ENSPMRG00000021424) #18	RBX1 (ENSPMRG00000021419) #19	EP300 (ENSPMRG00000021378) #20	ENSPMRG00000020965 #22	CHADL (ENSPMRG00000020900) #23	ENSPMRG00000020893	RANGAP1 (ENSPMRG00000020887) #24	ZC3H7B (ENSPMRG00000020871) #25	TEF (ENSPMRG00000020863) #26	TOB2 (ENSPMRG00000020859) #27	PHF5A (ENSPMRG00000020857) #28	ACO2 (ENSPMRG00000020422) #29	CSDC2 (ENSPMRG00000020362) #31	PMM1 (ENSPMRG00000020353) #32	DESI1 (ENSPMRG00000020343) #33	XRCC6 (ENSPMRG00000020330) #34	SNU13 (ENSPMRG00000020324) #35	MEI1 (ENSPMRG00000020311) #37	CCDC134 (ENSPMRG00000020301)
Common wall lizard	MODERN SPECIES	326																ENSPMRG00000019338 #22
Argentine black and white tegu	MODERN SPECIES	6	ENSSMRG00000015587 #7	ENSSMRG00000015586	ENSSMRG00000015585	ENSSMRG00000015584 #8	ENSSMRG00000015583 #8	FAM83F (ENSSMRG00000015582) #9	TNRC6B (ENSSMRG00000015580) #10	ADSL (ENSSMRG00000015579) #11	SGSM3 (ENSSMRG00000015577) #12	MRTFA (ENSSMRG00000015576) #13	SLC25A17 (ENSSMRG00000015575) #15	ENSSMRG00000015574 #16	XPNPEP3 (ENSSMRG00000015573) #18	RBX1 (ENSSMRG00000015572) #19	EP300 (ENSSMRG00000015570) #20	L3MBTL2 (ENSSMRG00000015569) #22	CHADL (ENSSMRG00000015568) #23	ENSSMRG00000015566	RANGAP1 (ENSSMRG00000015363) #24	ZC3H7B (ENSSMRG00000015357) #25	TEF (ENSSMRG00000015355) #26	TOB2 (ENSSMRG00000015352) #27	PHF5A (ENSSMRG00000015351) #28	ACO2 (ENSSMRG00000015350) #29	CSDC2 (ENSSMRG00000015349) #31	PMM1 (ENSSMRG00000015348) #32	DESI1 (ENSSMRG00000015347) #33	XRCC6 (ENSSMRG00000014777) #34	ENSSMRG00000014776	ENSSMRG00000014775 #37	CCDC134 (ENSSMRG00000014772)
Toxicofera	ANCESTRAL SPECIES	7	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998 #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339
Elapidae	ANCESTRAL SPECIES	6	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998.a #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.a ##13	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339.a
Indian cobra	MODERN SPECIES	6	ATF4 (ENSNNAG00000005776)	RPS19BP1 (ENSNNAG00000005761)	CACNA1I (ENSNNAG00000005643)	ENSNNAG00000005619 #7	GRAP2 (ENSNNAG00000005604) #8	FAM83F (ENSNNAG00000005582) #9	TNRC6B (ENSNNAG00000005431) #10	SGSM3 (ENSNNAG00000004902) #12	ENSNNAG00000004858 ##13	MRTFA (ENSNNAG00000004822) #13	SLC25A17 (ENSNNAG00000004807) #15	ENSNNAG00000004788 #16	XPNPEP3 (ENSNNAG00000004765) #18	RBX1 (ENSNNAG00000004745) #19	EP300 (ENSNNAG00000004664) #20	L3MBTL2 (ENSNNAG00000004623) #22	ENSNNAG00000004605 #24	ENSNNAG00000004583 #24	ZC3H7B (ENSNNAG00000004566) #25	TEF (ENSNNAG00000004545) #26	TOB2 (ENSNNAG00000004539) #27	PHF5A (ENSNNAG00000004530) #28	ACO2 (ENSNNAG00000004487) #29	CSDC2 (ENSNNAG00000004467) #31	PMM1 (ENSNNAG00000004428) #32	DESI1 (ENSNNAG00000004395) #33	XRCC6 (ENSNNAG00000004359) #34	SNU13 (ENSNNAG00000004338) #35	ENSNNAG00000004288 #37	CCDC134 (ENSNNAG00000004264)	SREBF2 (ENSNNAG00000003397)
Elapidae_a	ANCESTRAL SPECIES	1	ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998.a #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339.a
Acanthophiinae	ANCESTRAL SPECIES		ENSGT00530000063801.a	ENSGT00390000016774	ENSGT00940000158594	ENSGT00940000161730 #7	ENSGT00940000157307 #8	ENSGT00940000160998.a #9	ENSGT00940000155813 #10	ENSGT00950000183122.C #11	ENSGT00940000157282 #12	ENSGT00950000182979.a.b.b.a #13	ENSGT00920000149129 #15	ENSGT00390000001347.r #16	ENSGT00940000153657.A #18	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00730000111100 #33	ENSGT00940000153239.B #34	ENSGT00550000074840 #35	ENSGT00390000002077 #37	ENSGT00390000020164	ENSGT00940000157339.a
Mainland tiger snake	MODERN SPECIES	6	RPS19BP1 (ENSNSUG00000004877)	CACNA1I (ENSNSUG00000004870)	ENSNSUG00000004869 #7	GRAP2 (ENSNSUG00000004866) #8	FAM83F (ENSNSUG00000004863) #9	TNRC6B (ENSNSUG00000004407) #10	ADSL (ENSNSUG00000004394) #11	SGSM3 (ENSNSUG00000004382) #12	ENSNSUG00000004379 #13	ENSNSUG00000004377 #13	SLC25A17 (ENSNSUG00000004369) #15	ENSNSUG00000004350	XPNPEP3 (ENSNSUG00000004342) #18	RBX1 (ENSNSUG00000004338) #19	EP300 (ENSNSUG00000004324) #20	L3MBTL2 (ENSNSUG00000004288) #22	RANGAP1 (ENSNSUG00000003774) #24	ZC3H7B (ENSNSUG00000003755) #25	TEF (ENSNSUG00000003754) #26	TOB2 (ENSNSUG00000003753) #27	PHF5A (ENSNSUG00000003750) #28	ACO2 (ENSNSUG00000003747) #29	CSDC2 (ENSNSUG00000003745) #31	PMM1 (ENSNSUG00000003714) #32	DESI1 (ENSNSUG00000003709) #33	XRCC6 (ENSNSUG00000003704) #34	SNU13 (ENSNSUG00000003702) #35	ENSNSUG00000003697 #37	CCDC134 (ENSNSUG00000003692)	SREBF2 (ENSNSUG00000003621)	ENSNSUG00000003617
Eastern brown snake	MODERN SPECIES		ATF4 (ENSPTXG00000001354)	RPS19BP1 (ENSPTXG00000001356)	CACNA1I (ENSPTXG00000001364)	ENSPTXG00000001373 #7	GRAP2 (ENSPTXG00000001380) #8	FAM83F (ENSPTXG00000001386) #9	TNRC6B (ENSPTXG00000001407) #10	ADSL (ENSPTXG00000001437) #11	SGSM3 (ENSPTXG00000001446) #12	MRTFA (ENSPTXG00000001572) #13	SLC25A17 (ENSPTXG00000001574) #15	ENSPTXG00000001579 #16	XPNPEP3 (ENSPTXG00000001583) #18	RBX1 (ENSPTXG00000001586) #19	EP300 (ENSPTXG00000001636) #20	L3MBTL2 (ENSPTXG00000001671) #22	CHADL (ENSPTXG00000001681) #23	RANGAP1 (ENSPTXG00000001684) #24	ZC3H7B (ENSPTXG00000001686) #25	ENSPTXG00000001688	TEF (ENSPTXG00000001690) #26	TOB2 (ENSPTXG00000001691) #27	PHF5A (ENSPTXG00000001692) #28	ACO2 (ENSPTXG00000001693) #29	CSDC2 (ENSPTXG00000001696) #31	PMM1 (ENSPTXG00000000011) #32	DESI1 (ENSPTXG00000000015) #33	XRCC6 (ENSPTXG00000000018) #34	SNU13 (ENSPTXG00000000028) #35	ENSPTXG00000000049 #37	CCDC134 (ENSPTXG00000000073)
Blue-lipped sea krait	MODERN SPECIES	4740																L3MBTL2 (ENSLLTG00000018085) #22
Lizard	MODERN SPECIES	4	RPS19BP1 (ENSACAG00000007571)	CACNA1I (ENSACAG00000007474)	ENSACAG00000041503	ENSACAG00000007459 #7	GRAP2 (ENSACAG00000007407) #8	FAM83F (ENSACAG00000007387) #9	TNRC6B (ENSACAG00000007281) #10	ADSL (ENSACAG00000007206) #11	SGSM3 (ENSACAG00000005430) #12	MRTFA (ENSACAG00000005348) #13	SLC25A17 (ENSACAG00000005318) #15	ENSACAG00000005227 #16	XPNPEP3 (ENSACAG00000005215) #18	RBX1 (ENSACAG00000005208) #19	EP300 (ENSACAG00000005148) #20	L3MBTL2 (ENSACAG00000005056) #22	ENSACAG00000027273	RANGAP1 (ENSACAG00000004943) #24	ZC3H7B (ENSACAG00000004820) #25	TEF (ENSACAG00000004810) #26	TOB2 (ENSACAG00000004782) #27	PHF5A (ENSACAG00000004775) #28	ACO2 (ENSACAG00000004677) #29	CSDC2 (ENSACAG00000042839) #31	PMM1 (ENSACAG00000004619) #32	DESI1 (ENSACAG00000004597) #33	XRCC6 (ENSACAG00000004508) #34	SNU13 (ENSACAG00000037043) #35	ENSACAG00000004476 #37	CCDC134 (ENSACAG00000004397)	SREBF2 (ENSACAG00000004146)
tuatara	MODERN SPECIES	1295		INHBA (ENSSPUG00000010721)	GRAP2 (ENSSPUG00000010737) #8	FAM83F (ENSSPUG00000010758) #9	TNRC6B (ENSSPUG00000010801) #10	ADSL (ENSSPUG00000010886) #11	SGSM3 (ENSSPUG00000010979) #12	ENSSPUG00000011001 #13	ENSSPUG00000011074 #13	MCHR1 (ENSSPUG00000011088) #14	SLC25A17 (ENSSPUG00000011136) #15	ENSSPUG00000011346 #16	XPNPEP3 (ENSSPUG00000011362) #18	RBX1 (ENSSPUG00000011379) #19	EP300 (ENSSPUG00000011389) #20	L3MBTL2 (ENSSPUG00000011413) #22	CHADL (ENSSPUG00000011437) #23	RANGAP1 (ENSSPUG00000011454) #24	ZC3H7B (ENSSPUG00000011490) #25	TEF (ENSSPUG00000011581) #26	PHF5A (ENSSPUG00000011593) #28	ACO2 (ENSSPUG00000011600) #29	POLR3H (ENSSPUG00000011619) #30	CSDC2 (ENSSPUG00000011628) #31	PMM1 (ENSSPUG00000011697) #32	ENSSPUG00000012027	DESI1 (ENSSPUG00000012040) #33	XRCC6 (ENSSPUG00000012086) #34	SNU13 (ENSSPUG00000012098) #35	ENSSPUG00000012111 #37
Anura	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b #22
Frog	MODERN SPECIES	4	rgs13 (ENSXETG00000036070)	rgs1 (ENSXETG00000005674)	ENSXETG00000045757	rgs21 (ENSXETG00000035089)	rgs18 (ENSXETG00000026662)	ENSXETG00000042835	ENSXETG00000048626	ENSXETG00000046795	brinp3 (ENSXETG00000022986)	ENSXETG00000042627	apold1 (ENSXETG00000048852)	ddx47 (ENSXETG00000022984)	gprc5a (ENSXETG00000022983)	hebp1 (ENSXETG00000027311)	chadl (ENSXETG00000022982)	l3mbtl2 (ENSXETG00000022981) #22	ENSXETG00000042501	rbx1 (ENSXETG00000035313) #19	ep300 (ENSXETG00000022974) #20	xpnpep3 (ENSXETG00000022973) #18	fhit (ENSXETG00000022969)	st13 (ENSXETG00000022971) #16	mrtfa (ENSXETG00000022963) #13	ENSXETG00000032012	cenpm (ENSXETG00000027331)	ENSXETG00000036884	septin3 (ENSXETG00000049180)	pheta2 (ENSXETG00000000260)	smdt1 (ENSXETG00000027338)	ndufa6 (ENSXETG00000000256)	mcm5 (ENSXETG00000000253)
Coelacanth	MODERN SPECIES	2413															ENSLACG00000008149 #20	L3MBTL2 (ENSLACG00000007201) #22	IFT27 (ENSLACG00000006563)	RPL3 (ENSLACG00000006276)	SYNGR1 (ENSLACG00000005709)	ENSLACG00000004576	CBX7 (ENSLACG00000003710)	ENSLACG00000002657	CBX6 (ENSLACG00000001171)
Actinopterygii	ANCESTRAL SPECIES	269												ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497 #20	ENSGT00940000153840.a.b #22	ENSGT00940000154464.b #23	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00390000018518 #28	ENSGT00940000154892 #29	ENSGT00390000004383 #30	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32
Neopterygii	ANCESTRAL SPECIES	121							ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365	ENSGT00940000155497.a.a #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00440000039203 #24	ENSGT00390000018542.a #25	ENSGT00940000156578 #26	ENSGT00940000154208.d #27	ENSGT00940000154892.m.a #29	ENSGT00390000004383 #30	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b #31	ENSGT00390000002918.a.b #32	ENSGT00940000155955.C	ENSGT00530000063509.A	ENSGT00950000183040.B	ENSGT00940000155025.A	ENSGT00940000163472
Osteoglossocephalai	ANCESTRAL SPECIES	47	ENSGT00940000166738	ENSGT01100000263483.F.b.a.b	ENSGT00920000149129 #15	ENSGT00950000182979.a.a.a.a ##13	ENSGT00940000163663.A.a	ENSGT00730000111100.a.a #33	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.a #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00440000039203.j #24	ENSGT00390000018542.a.b #25	ENSGT00940000156578.a.a #26	ENSGT00940000154208.d #27	ENSGT00940000154892.m.a #29	ENSGT00390000004383 #30	ENSGT00390000000022.b.a.a #31	ENSGT00390000002918.a.b #32
Osteoglossiformes	ANCESTRAL SPECIES	64							ENSGT00920000149129 #15	ENSGT00950000182979.a.a.a.a ##13	ENSGT00940000163663.A.a	ENSGT00390000009228.b	ENSGT00940000158365.f.b	ENSGT00940000155497.a.a.k #20	ENSGT00940000153657.A #18	ENSGT00390000001347 #16	ENSGT00940000155618 #19	ENSGT00940000153840.a.b #22	ENSGT00940000165277.c	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000154208.d.m #27	ENSGT00390000004383 #30	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.a	ENSGT01030000235186	ENSGT00530000063509.A.g	ENSGT00950000183040.B	ENSGT00940000155025.A	ENSGT00940000163472	ENSGT00940000158369.a.b	ENSGT00940000160068.a.a	ENSGT00940000157763
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	12	pla2g6 (ENSSFOG00015004646)	ENSSFOG00015028604	cbx6a (ENSSFOG00015032962)	nptxrb (ENSSFOG00015025949)	dnal4b (ENSSFOG00015004593)	mrtfab (ENSSFOG00015004553) ##13	ENSSFOG00015004534	desi1a (ENSSFOG00015029550) #33	l3mbtl2 (ENSSFOG00015030235) #22	ENSSFOG00015014021 #19	xrcc6 (ENSSFOG00015014409) #34	ENSSFOG00015030505	EP300 (ENSSFOG00015014129) #20	st13 (ENSSFOG00015014040) #16	ENSSFOG00015024363 #19	l3mbtl2 (ENSSFOG00015029446) #22	chadlb (ENSSFOG00015013966)	rangap1b (ENSSFOG00015013842) #24	tefa (ENSSFOG00015023219) #26	phf5a (ENSSFOG00015013765) #28	aco2 (ENSSFOG00015013704) #29	CSDC2 (ENSSFOG00015011532) #31	PMM1 (ENSSFOG00015013657) #32	GUCY2C (ENSSFOG00015013494)	ENSSFOG00015026157	PLBD1 (ENSSFOG00015013345)	cby1 (ENSSFOG00015030699)	slc16a8 (ENSSFOG00015013299)	pdap1a (ENSSFOG00015013279)	SH3BP1 (ENSSFOG00015013246)	ENSSFOG00015030985
Asian bonytongue	MODERN SPECIES	12	GUCY2C (ENSSFOG00015013494)	PMM1 (ENSSFOG00015013657) #32	CSDC2 (ENSSFOG00015011532) #31	aco2 (ENSSFOG00015013704) #29	phf5a (ENSSFOG00015013765) #28	tefa (ENSSFOG00015023219) #26	rangap1b (ENSSFOG00015013842) #24	chadlb (ENSSFOG00015013966)	l3mbtl2 (ENSSFOG00015029446) #22	ENSSFOG00015024363 #19	st13 (ENSSFOG00015014040) #16	EP300 (ENSSFOG00015014129) #20	ENSSFOG00015030505	xrcc6 (ENSSFOG00015014409) #34	ENSSFOG00015014021 #19	l3mbtl2 (ENSSFOG00015030235) #22	desi1a (ENSSFOG00015029550) #33	ENSSFOG00015004534	mrtfab (ENSSFOG00015004553) ##13	dnal4b (ENSSFOG00015004593)	nptxrb (ENSSFOG00015025949)	cbx6a (ENSSFOG00015032962)	ENSSFOG00015028604	pla2g6 (ENSSFOG00015004646)	pvalb6 (ENSSFOG00015026993)	ncf4 (ENSSFOG00015004718)	ENSSFOG00015023734	ENSSFOG00015032503	ENSSFOG00015023744	ENSSFOG00015023749	ENSSFOG00015023753
P. kingsleyae	MODERN SPECIES	141	baiap2l2b (ENSPKIG00000004259)	pla2g6 (ENSPKIG00000004189)	CBX6 (ENSPKIG00000004143)	nptxrb (ENSPKIG00000004121)	dnal4b (ENSPKIG00000004101)	si:ch1073-357b18.4 (ENSPKIG00000004077)	mrtfab (ENSPKIG00000004053) ##13	ENSPKIG00000004031	desi1a (ENSPKIG00000004018) #33	xrcc6 (ENSPKIG00000003974) #34	ENSPKIG00000003942	EP300 (ENSPKIG00000003816) #20	xpnpep3 (ENSPKIG00000003746) #18	st13 (ENSPKIG00000003681) #16	ENSPKIG00000003639 #19	l3mbtl2 (ENSPKIG00000003503) #22	chadlb (ENSPKIG00000003436)	rangap1b (ENSPKIG00000003343) #24	ENSPKIG00000003296	ZC3H7B (ENSPKIG00000003219) #25	tefa (ENSPKIG00000003161) #26	TOB2 (ENSPKIG00000003127) #27	phf5a (ENSPKIG00000003100) #28	aco2 (ENSPKIG00000003055) #29	CSDC2 (ENSPKIG00000003033) #31	PMM1 (ENSPKIG00000003003) #32	ENSPKIG00000002915	ENSPKIG00000002853	cby1 (ENSPKIG00000002813)	pdap1a (ENSPKIG00000002773)	ENSPKIG00000002746
Clupeocephala	ANCESTRAL SPECIES	83										ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	45								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Protacanthopterygii	ANCESTRAL SPECIES	4	ENSGT00390000013648	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b	ENSGT00390000018570.a.a.a	ENSGT00390000016123	ENSGT00940000157839	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00940000155813.i.b #10
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	147									ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b.c #22
Salmo	ANCESTRAL SPECIES	23	ENSGT01100000263556.b.a.b	ENSGT01100000263491.a.b.a.a.b.b.a	ENSGT00400000022326.b.a.b.a.b.a.a.a	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Atlantic salmon	DUPLICATION
Atlantic salmon	MODERN SPECIES		ENSSSAG00000116752	ENSSSAG00000001538	ENSSSAG00000092741	CDR2 (ENSSSAG00000088344)	ENSSSAG00000001561	ENSSSAG00000088707	eef2k (ENSSSAG00000001615)	ENSSSAG00000001654 ##13	ENSSSAG00000091473	desi1b (ENSSSAG00000090604) #33	xrcc6 (ENSSSAG00000001692) #34	ENSSSAG00000105775	josd1 (ENSSSAG00000115290)	ENSSSAG00000118777	ENSSSAG00000001794 #20	l3mbtl2 (ENSSSAG00000001922) #22	chadlb (ENSSSAG00000002125)	rangap1b (ENSSSAG00000002137) #24	ZC3H7B (ENSSSAG00000002171) #25	tef (ENSSSAG00000002242) #26	PHF5A (ENSSSAG00000002272) #28	aco2 (ENSSSAG00000002315) #29	csdc2a (ENSSSAG00000002399) #31	ENSSSAG00000002491	ENSSSAG00000002780	ENSSSAG00000002830	cby1 (ENSSSAG00000116184)	HAP28 (ENSSSAG00000003264)	ENSSSAG00000003294	ENSSSAG00000121794	ENSSSAG00000099860
Atlantic salmon	MODERN SPECIES																	ENSSSAG00000095985 #22	ENSSSAG00000088399	ENSSSAG00000103107	ENSSSAG00000000063	ube2d3 (ENSSSAG00000110109)	ENSSSAG00000000049	ENSSSAG00000101513	ENSSSAG00000109226	ENSSSAG00000112437	ENSSSAG00000000051	ENSSSAG00000000052	ENSSSAG00000098245	ENSSSAG00000000057	ENSSSAG00000083486	ENSSSAG00000098639	noto (ENSSSAG00000000055)
River trout	MODERN SPECIES	9	ENSSTUG00000031999	ENSSTUG00000032011	CDR2 (ENSSTUG00000032030)	polr3e (ENSSTUG00000032076)	eef2k (ENSSTUG00000033337)	tha1 (ENSSTUG00000033376)	ENSSTUG00000033391	mrtfab (ENSSTUG00000033398) ##13	desi1b (ENSSTUG00000033425) #33	xrcc6 (ENSSTUG00000033443) #34	ENSSTUG00000033802	ENSSTUG00000033810	josd1 (ENSSTUG00000033853)	ENSSTUG00000033872	EP300 (ENSSTUG00000033907) #20	l3mbtl2 (ENSSTUG00000034401) #22	chadlb (ENSSTUG00000034453)	rangap1b (ENSSTUG00000034462) #24	ZC3H7B (ENSSTUG00000034512) #25	tefa (ENSSTUG00000034592) #26	phf5a (ENSSTUG00000034623) #28	aco2 (ENSSTUG00000034674) #29	CSDC2 (ENSSTUG00000035962) #31	GUCY2C (ENSSTUG00000035978)	ENSSTUG00000036305	PLBD1 (ENSSTUG00000036378)	cby1 (ENSSTUG00000036903)	pdap1a (ENSSTUG00000036911)	SH3BP1 (ENSSTUG00000036926)	ENSSTUG00000036995	ENSSTUG00000037001
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	147								ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.c #22	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT00940000155813.i.b.f #10
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00940000153137.b.b	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722	ENSGT00940000155813.i.b.f.a #10
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00390000013648	ENSGT00940000164807.E.a.a.a.b.a.a.b	ENSGT01100000263556.b.a.b	ENSGT00390000018570.a.a.a.f	ENSGT00390000016123.d	ENSGT00940000157839.h	ENSGT00390000014681.r	ENSGT00950000182979.a.a.a.b.d ##13	ENSGT00940000163663.A.b.e	ENSGT00730000111100.a.b.b #33	ENSGT00940000153239.B.f #34	ENSGT00650000094704	ENSGT00390000009228.b.d	ENSGT00940000158365.f.a.e	ENSGT00940000155497.a.b.f #20	ENSGT00940000153840.a.b.d.a.a #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a.f.b #25	ENSGT00940000156578.a.b.e #26	ENSGT00390000018518.hb.b #28	ENSGT00940000154892.m.b.d #29	ENSGT00390000000022.b.b.b #31	ENSGT00940000155955.C.i.b.d	ENSGT00940000167326.a	ENSGT00530000063509.A.h	ENSGT01010000229564	ENSGT00390000018509.b.d	ENSGT00940000158369.f	ENSGT00940000160068.a.b.d	ENSGT01010000226722
Coho salmon	MODERN SPECIES	2	ENSOKIG00005007343	ENSOKIG00005007329	CDR2 (ENSOKIG00005007306)	ENSOKIG00005007282	POLR3E (ENSOKIG00005007240)	eef2k (ENSOKIG00005007171)	tha1 (ENSOKIG00005007124)	ENSOKIG00005007067 ##13	ENSOKIG00005007041	desi1b (ENSOKIG00005007029) #33	xrcc6 (ENSOKIG00005006924) #34	ENSOKIG00005006896	josd1 (ENSOKIG00005006888)	ENSOKIG00005006878	EP300 (ENSOKIG00005005140) #20	l3mbtl2 (ENSOKIG00005004839) #22	chadlb (ENSOKIG00005004813)	rangap1b (ENSOKIG00005004716) #24	ZC3H7B (ENSOKIG00005004689) #25	tefa (ENSOKIG00005004663) #26	phf5a (ENSOKIG00005004637) #28	aco2 (ENSOKIG00005003655) #29	CSDC2 (ENSOKIG00005003568) #31	ENSOKIG00005002499	ENSOKIG00005002241	PLBD1 (ENSOKIG00005002045)	ENSOKIG00005001953	pdap1a (ENSOKIG00005012108)	ENSOKIG00005011924	ENSOKIG00005011872	ENSOKIG00005011850
Chinook salmon	MODERN SPECIES		ENSOTSG00005014033	ENSOTSG00005014034	ENSOTSG00005014035	CDR2 (ENSOTSG00005014036)	polr3e (ENSOTSG00005014038)	eef2k (ENSOTSG00005014062)	tha1 (ENSOTSG00005014068)	ENSOTSG00005014069 ##13	mrtfab (ENSOTSG00005014071) ##13	ENSOTSG00005014074	desi1b (ENSOTSG00005014077) #33	xrcc6 (ENSOTSG00005014078) #34	josd1 (ENSOTSG00005014101)	ENSOTSG00005014103	EP300 (ENSOTSG00005014113) #20	l3mbtl2 (ENSOTSG00005014144) #22	chadlb (ENSOTSG00005014302)	ENSOTSG00005014303	ENSOTSG00005014305	RANGAP1 (ENSOTSG00005014308) #24	ZC3H7B (ENSOTSG00005014316) #25	tefa (ENSOTSG00005014317) #26	phf5a (ENSOTSG00005014318) #28	aco2 (ENSOTSG00005014323) #29	CSDC2 (ENSOTSG00005017611) #31	ENSOTSG00005017639	ENSOTSG00005021719	PLBD1 (ENSOTSG00005021728)	ENSOTSG00005023029	pdap1a (ENSOTSG00005023031)	ENSOTSG00005023033
Rainbow trout	MODERN SPECIES	15	ENSOMYG00000044563	ENSOMYG00000044568	ENSOMYG00000048942	CDR2 (ENSOMYG00000044576)	ENSOMYG00000044581	ENSOMYG00000044584	EEF2K (ENSOMYG00000044604)	ENSOMYG00000044616	mrtfab (ENSOMYG00000044624) ##13	ENSOMYG00000073573	desi1b (ENSOMYG00000044645) #33	xrcc6 (ENSOMYG00000044661) #34	josd1 (ENSOMYG00000044704)	ENSOMYG00000044706	ENSOMYG00000044715 #20	l3mbtl2 (ENSOMYG00000044742) #22	chadlb (ENSOMYG00000044762)	rangap1b (ENSOMYG00000044802) #24	ZC3H7B (ENSOMYG00000044864) #25	tefa (ENSOMYG00000044872) #26	phf5a (ENSOMYG00000044879) #28	aco2 (ENSOMYG00000044954) #29	ENSOMYG00000045437 #31	ENSOMYG00000065029	ENSOMYG00000069439	ENSOMYG00000045501	ENSOMYG00000045626	ENSOMYG00000045631	ENSOMYG00000045667	pdap1a (ENSOMYG00000045795)	ENSOMYG00000045804
Huchen	MODERN SPECIES	506																l3mbtl2 (ENSHHUG00000012935) #22	chadlb (ENSHHUG00000012910)	rangap1b (ENSHHUG00000012688) #24	ZC3H7B (ENSHHUG00000012672) #25	tefa (ENSHHUG00000012668) #26	phf5a (ENSHHUG00000012665) #28	aco2 (ENSHHUG00000012645) #29	CSDC2 (ENSHHUG00000012640) #31	ENSHHUG00000012624	GUCY2C (ENSHHUG00000012612)	ENSHHUG00000012581	PLBD1 (ENSHHUG00000012535)	pdap1a (ENSHHUG00000012521)	ENSHHUG00000012495	ENSHHUG00000012489	ENSHHUG00000012461 #10
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153840.a.b.d.a.b #22
Huchen	MODERN SPECIES	11515																ENSHHUG00000016613 #22
Salmoninae_a	ANCESTRAL SPECIES	45	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #33	ENSGT00940000153239.B.e #34	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.a.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #28	ENSGT00390000018518.ib #28	ENSGT00940000154892.m.b.c #29	ENSGT00390000000022.b.b.a #31	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e #10	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT01030000234576.D.a.a.b.a.a.a.a.a.b.a.b	ENSGT00940000162287.B.a.b	ENSGT00390000004010.a.b.a.b.c	ENSGT00400000022326.b.a.b.a.b.b	ENSGT01100000263520.a.a.a.b.a.b.c.b	ENSGT00390000018570.a.a.a.e	ENSGT00390000016123.c	ENSGT00940000157839.g	ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #33	ENSGT00940000153239.B.e #34	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.a.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #28	ENSGT00940000154892.m.b.c #29	ENSGT00390000000022.b.b.a #31	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e #10	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g	ENSGT00940000161112.d
Rainbow trout	MODERN SPECIES	12	DHX8 (ENSOMYG00000020305)	ENSOMYG00000017863	meox1 (ENSOMYG00000017853)	ENSOMYG00000053297	ENSOMYG00000017846	ENSOMYG00000063210	ENSOMYG00000017828	ENSOMYG00000017552	ENSOMYG00000017414 ##13	ENSOMYG00000017381	desi1b (ENSOMYG00000017395) #33	xrcc6 (ENSOMYG00000017357) #34	josd1 (ENSOMYG00000017332)	ENSOMYG00000017328	ENSOMYG00000016994 #20	l3mbtl2 (ENSOMYG00000055655) #22	ENSOMYG00000072442 #25	tefa (ENSOMYG00000016891) #26	phf5a (ENSOMYG00000016861) #28	aco2 (ENSOMYG00000016376) #29	ENSOMYG00000016354 #31	ENSOMYG00000069177	ENSOMYG00000015952	ENSOMYG00000059884	ENSOMYG00000015861	cby1 (ENSOMYG00000015849)	pdap1a (ENSOMYG00000015825)	ENSOMYG00000015806	ENSOMYG00000015796	ENSOMYG00000015787 #10	csnk1e (ENSOMYG00000013518)
Salmoninae	ANCESTRAL SPECIES	424									ENSGT00950000182979.a.a.a.b.c ##13	ENSGT00940000163663.A.b.f	ENSGT00730000111100.a.b.a #33	ENSGT00940000153239.B.e #34	ENSGT00390000009228.b.c	ENSGT00940000158365.f.a.f	ENSGT00940000155497.a.b.e #20	ENSGT00940000153840.a.b.d.b #22	ENSGT00390000018542.a.a.f.a #25	ENSGT00940000156578.a.b.f #26	ENSGT00390000018518.hb.a #28	ENSGT00940000154892.m.b.c #29	ENSGT00390000000022.b.b.a #31	ENSGT00940000155955.C.i.b.c	ENSGT00940000167326.b	ENSGT00940000153137.b.a	ENSGT00390000018509.b.c	ENSGT00940000158369.e	ENSGT00940000160068.a.b.c	ENSGT00940000155813.i.b.e #10	ENSGT00940000153536.a.a.a.a.f	ENSGT00940000153861.b.a.g	ENSGT00940000161112.d
Huchen	MODERN SPECIES	288										ENSHHUG00000046850	desi1b (ENSHHUG00000046855) #33	xrcc6 (ENSHHUG00000046863) #34	josd1 (ENSHHUG00000046896)	ENSHHUG00000046898	EP300 (ENSHHUG00000046937) #20	ENSHHUG00000047060 #22	ENSHHUG00000047079	ENSHHUG00000047084	ENSHHUG00000047086	ENSHHUG00000047089 #25	tefa (ENSHHUG00000047095) #26	phf5a (ENSHHUG00000047108) #28	aco2 (ENSHHUG00000047122) #29	ENSHHUG00000047159	CSDC2 (ENSHHUG00000047162) #31	ENSHHUG00000047164	ENSHHUG00000047173	cby1 (ENSHHUG00000047186)	pdap1a (ENSHHUG00000000012)	ENSHHUG00000000094	ENSHHUG00000000152
Northern pike	MODERN SPECIES	4	kdelr2b (ENSELUG00000020755)	mettl9 (ENSELUG00000020737)	ENSELUG00000020703	ENSELUG00000028258	CDR2 (ENSELUG00000033724)	polr3e (ENSELUG00000020683)	eef2k (ENSELUG00000000906)	tha1 (ENSELUG00000020367)	mrtfab (ENSELUG00000020339) ##13	ENSELUG00000020324	desi1b (ENSELUG00000020313) #33	xrcc6 (ENSELUG00000020301) #34	josd1 (ENSELUG00000020267)	ENSELUG00000020028	EP300 (ENSELUG00000020189) #20	l3mbtl2 (ENSELUG00000019986) #22	chadlb (ENSELUG00000019959)	rangap1b (ENSELUG00000019942) #24	ZC3H7B (ENSELUG00000019891) #25	tefa (ENSELUG00000019815) #26	phf5a (ENSELUG00000019796) #28	aco2 (ENSELUG00000019769) #29	CSDC2 (ENSELUG00000019696) #31	ENSELUG00000019680	ENSELUG00000019633	PLBD1 (ENSELUG00000019605)	cby1 (ENSELUG00000019580)	pdap1a (ENSELUG00000019533)	ENSELUG00000019508	ENSELUG00000000853	ENSELUG00000019468 #10
Acanthomorphata	ANCESTRAL SPECIES	23								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Euacanthomorphacea	ANCESTRAL SPECIES	6								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Percomorphaceae	ANCESTRAL SPECIES	5	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	4	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369
Ovalentaria	ANCESTRAL SPECIES	13	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Atherinomorphae	ANCESTRAL SPECIES	10	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Oryzias	ANCESTRAL SPECIES	11	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b #10
Oryzias_b	ANCESTRAL SPECIES	9	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00390000008061.ab.a.a.a.a	ENSGT00390000008061.ab.a.a.a.b	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b
Javanese ricefish	MODERN SPECIES	10	ENSOJAG00000002967	rbp3 (ENSOJAG00000003044)	gdf2 (ENSOJAG00000003053)	gdf10b (ENSOJAG00000003077)	FRMPD2 (ENSOJAG00000003085)	mapk8b (ENSOJAG00000003171)	ARHGAP22 (ENSOJAG00000003508)	VSTM4 (ENSOJAG00000004182)	ENSOJAG00000004244	ENSOJAG00000004257 ##13	ENSOJAG00000004271 ##13	xrcc6 (ENSOJAG00000004317) #34	ENSOJAG00000004376	josd1 (ENSOJAG00000004391)	CBX7 (ENSOJAG00000004405)	l3mbtl2 (ENSOJAG00000004841) #22	chadlb (ENSOJAG00000004868)	rangap1b (ENSOJAG00000004890) #24	ZC3H7B (ENSOJAG00000005022) #25	tefa (ENSOJAG00000005056) #26	phf5a (ENSOJAG00000005081) #28	aco2 (ENSOJAG00000005119) #29	csdc2a (ENSOJAG00000005463) #31	ENSOJAG00000005484	ENSOJAG00000005487	ENSOJAG00000005500	ENSOJAG00000005507	ENSOJAG00000005520	ENSOJAG00000005616	PLBD1 (ENSOJAG00000005665)	cby1 (ENSOJAG00000006380)
Indian medaka	MODERN SPECIES	17	LRRC18 (ENSOMEG00000009322)	ARHGAP22 (ENSOMEG00000009296)	mapk8b (ENSOMEG00000009255)	FRMPD2 (ENSOMEG00000009174)	gdf10b (ENSOMEG00000009101)	gdf2 (ENSOMEG00000009094)	rbp3 (ENSOMEG00000009087)	ENSOMEG00000009072	ENSOMEG00000009039	xrcc6 (ENSOMEG00000008998) #34	ENSOMEG00000008945	josd1 (ENSOMEG00000008932)	ENSOMEG00000008892	EP300 (ENSOMEG00000008863) #20	ENSOMEG00000008818	l3mbtl2 (ENSOMEG00000008798) #22	chadlb (ENSOMEG00000008740)	rangap1b (ENSOMEG00000008703) #24	ZC3H7B (ENSOMEG00000008642) #25	tefa (ENSOMEG00000008586) #26	phf5a (ENSOMEG00000008564) #28	aco2 (ENSOMEG00000000704) #29	csdc2a (ENSOMEG00000008503) #31	ENSOMEG00000008492	ENSOMEG00000000840	ENSOMEG00000008483	ENSOMEG00000008473	ENSOMEG00000000207	ENSOMEG00000008464	ENSOMEG00000008455	ENSOMEG00000008443
Oryzias_a	ANCESTRAL SPECIES	32	ENSGT00390000014726.c.b	ENSGT00940000159802	ENSGT00940000157214.f.a	ENSGT00940000161964.g.b	ENSGT00940000153692.B.a	ENSGT00950000183015.B.a.a	ENSGT00940000156026.f	ENSGT00390000008566.b.f	ENSGT01000000214725.A	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000158369.h	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b #10
Japanese Medaka HdrR	MODERN SPECIES	10	rbp3 (ENSORLG00000020292)	gdf2 (ENSORLG00000020287)	gdf10b (ENSORLG00000020281)	ENSORLG00000028063	FRMPD2 (ENSORLG00000002323)	mapk8b (ENSORLG00000002370)	ARHGAP22 (ENSORLG00000002387)	LRRC18 (ENSORLG00000002394)	VSTM4 (ENSORLG00000002399)	mrtfab (ENSORLG00000002421) ##13	ENSORLG00000025662	xrcc6 (ENSORLG00000002436) #34	josd1 (ENSORLG00000029725)	ENSORLG00000026332	ENSORLG00000002496 #20	l3mbtl2 (ENSORLG00000002510) #22	chadlb (ENSORLG00000002517)	rangap1b (ENSORLG00000002547) #24	ZC3H7B (ENSORLG00000002568) #25	tefa (ENSORLG00000002582) #26	phf5a (ENSORLG00000002591) #28	aco2 (ENSORLG00000002618) #29	csdc2a (ENSORLG00000024428) #31	ENSORLG00000028944	ENSORLG00000002652	ENSORLG00000028670	ENSORLG00000029436	ENSORLG00000028126	ENSORLG00000025322	gucy2cb (ENSORLG00000002713)	ENSORLG00000025913
Chinese medaka	MODERN SPECIES	572															EP300 (ENSOSIG00000018487) #20	l3mbtl2 (ENSOSIG00000018481) #22	chadlb (ENSOSIG00000018479)
Cyprinodontiformes	ANCESTRAL SPECIES	13	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Cyprinodontoidei	ANCESTRAL SPECIES	28	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
NAME_4	ANCESTRAL SPECIES	27	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
Mummichog	MODERN SPECIES	2261	RBP3 (ENSFHEG00000017358)	rbp3 (ENSFHEG00000017348)	ENSFHEG00000017324	ubtd1b (ENSFHEG00000017199)	mms19 (ENSFHEG00000017171)	zdhhc16b (ENSFHEG00000000433)	vps35l (ENSFHEG00000016996)	get4 (ENSFHEG00000016923)	mrtfab (ENSFHEG00000016878) ##13	desi1b (ENSFHEG00000016842) #33	xrcc6 (ENSFHEG00000016833) #34	ENSFHEG00000016818	josd1 (ENSFHEG00000016813)	ENSFHEG00000016782	EP300 (ENSFHEG00000016768) #20	l3mbtl2 (ENSFHEG00000016621) #22	chadlb (ENSFHEG00000016608)
Sheepshead minnow	MODERN SPECIES	509	dhrs13b.1 (ENSCVAG00000002076)	rbp3 (ENSCVAG00000002079)	ENSCVAG00000002086	ubtd1b (ENSCVAG00000002093)	mms19 (ENSCVAG00000002113)	zdhhc16b (ENSCVAG00000002126)	vps35l (ENSCVAG00000002135)	get4 (ENSCVAG00000002141)	mrtfab (ENSCVAG00000002168) ##13	desi1b (ENSCVAG00000002180) #33	xrcc6 (ENSCVAG00000002189) #34	josd1 (ENSCVAG00000002195)	CBX7 (ENSCVAG00000002206)	EP300 (ENSCVAG00000002250) #20	ENSCVAG00000002255	ENSCVAG00000002259 #22	chadlb (ENSCVAG00000002262)	rangap1b (ENSCVAG00000002275) #24
Poeciliinae	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.a.a	ENSGT00940000154352.A
Poecilia	ANCESTRAL SPECIES	15	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.b	ENSGT00940000154352.A
NAME_6	ANCESTRAL SPECIES		ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT01030000234586.A.a.a.a	ENSGT00390000016438	ENSGT00390000017328.a.b	ENSGT00940000164208	ENSGT00940000157539	ENSGT01090000260005.a.b.a.a	ENSGT00940000165576.b	ENSGT00940000154352.A
Amazon molly	MODERN SPECIES	256	ubtd1b (ENSPFOG00000017463)	mms19 (ENSPFOG00000017424)	zdhhc16b (ENSPFOG00000024323)	zdhhc16b (ENSPFOG00000017419)	vps35l (ENSPFOG00000017291)	get4 (ENSPFOG00000017263)	mrtfab (ENSPFOG00000017227) ##13	ENSPFOG00000023236	ENSPFOG00000017214	desi1b (ENSPFOG00000017196) #33	xrcc6 (ENSPFOG00000017173) #34	ENSPFOG00000023433	josd1 (ENSPFOG00000017162)	ENSPFOG00000017155	ENSPFOG00000017073 #20	l3mbtl2 (ENSPFOG00000017006) #22	chadlb (ENSPFOG00000016956)	rangap1b (ENSPFOG00000016919) #24	ZC3H7B (ENSPFOG00000016834) #25	tefa (ENSPFOG00000016821) #26	phf5a (ENSPFOG00000016814) #28	aco2 (ENSPFOG00000016765) #29	csdc2a (ENSPFOG00000016755) #31	ENSPFOG00000020239	med24 (ENSPFOG00000016585)	ENSPFOG00000016574	ENSPFOG00000020238	top2a (ENSPFOG00000016534)	ENSPFOG00000016322	rarab (ENSPFOG00000016312)	mki67 (ENSPFOG00000016223)
Sailfin molly	MODERN SPECIES	1970																l3mbtl2 (ENSPLAG00000001276) #22	chadlb (ENSPLAG00000001281)	rangap1b (ENSPLAG00000001283) #24	ZC3H7B (ENSPLAG00000001288) #25	tefa (ENSPLAG00000001290) #26	phf5a (ENSPLAG00000001292) #28	aco2 (ENSPLAG00000001300) #29	csdc2a (ENSPLAG00000001305) #31
Guppy	MODERN SPECIES	449	ENSPREG00000021342	ubtd1b (ENSPREG00000021331)	mms19 (ENSPREG00000021276)	zdhhc16b (ENSPREG00000021251)	vps35l (ENSPREG00000021171)	get4 (ENSPREG00000021122)	mrtfab (ENSPREG00000021039) ##13	ENSPREG00000020998	desi1b (ENSPREG00000020982) #33	xrcc6 (ENSPREG00000020957) #34	josd1 (ENSPREG00000020940)	ENSPREG00000020913	EP300 (ENSPREG00000020888) #20	ENSPREG00000020876	ENSPREG00000020869	l3mbtl2 (ENSPREG00000020853) #22	chadlb (ENSPREG00000020780)	rangap1b (ENSPREG00000020745) #24	ZC3H7B (ENSPREG00000020727) #25	tefa (ENSPREG00000020710) #26	phf5a (ENSPREG00000020700) #28	aco2 (ENSPREG00000020672) #29	csdc2a (ENSPREG00000020652) #31	ENSPREG00000020645	ENSPREG00000020640	med24 (ENSPREG00000020582)	ENSPREG00000020569	ENSPREG00000020563	top2a (ENSPREG00000020534)	ENSPREG00000020520	rarab (ENSPREG00000020502)
Platyfish	MODERN SPECIES	1	RBP3 (ENSXMAG00000009541)	rbp3 (ENSXMAG00000029663)	ENSXMAG00000029632	ubtd1b (ENSXMAG00000022287)	mms19 (ENSXMAG00000009570)	zdhhc16b (ENSXMAG00000025584)	vps35l (ENSXMAG00000009612)	get4 (ENSXMAG00000009654)	mrtfab (ENSXMAG00000009671) ##13	ENSXMAG00000009684	desi1b (ENSXMAG00000009685) #33	xrcc6 (ENSXMAG00000009691) #34	josd1 (ENSXMAG00000021882)	ENSXMAG00000009724	EP300 (ENSXMAG00000009730) #20	l3mbtl2 (ENSXMAG00000009758) #22	chadlb (ENSXMAG00000000655)	rangap1b (ENSXMAG00000000663) #24	ZC3H7B (ENSXMAG00000026502) #25	tefa (ENSXMAG00000000678) #26	phf5a (ENSXMAG00000000679) #28	aco2 (ENSXMAG00000000683) #29	csdc2a (ENSXMAG00000000696) #31	ENSXMAG00000027223	ENSXMAG00000019660	med24 (ENSXMAG00000011374)	ENSXMAG00000028761	ENSXMAG00000021866	ENSXMAG00000019659	top2a (ENSXMAG00000011303)	ENSXMAG00000011301
Aplocheiloidei	ANCESTRAL SPECIES	181								ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00390000018518 #28	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00440000039203.i #24	ENSGT00940000165277.a
Turquoise killifish	MODERN SPECIES	1621	ENSNFUG00015019211 #10	BX000473.3 (ENSNFUG00015019205)	CDC42EP1 (ENSNFUG00015019200)	SH3BP1 (ENSNFUG00015019194)	CSDC2A (ENSNFUG00015019188) #31	ENSNFUG00015019187	ACO2 (ENSNFUG00015019055) #29	mrtfab (ENSNFUG00015019027) ##13	ENSNFUG00015019018	desi1b (ENSNFUG00015019008) #33	xrcc6 (ENSNFUG00015018912) #34	ENSNFUG00015018905	josd1 (ENSNFUG00015018897)	CBX7 (ENSNFUG00015018890)	EP300 (ENSNFUG00015018836) #20	L3MBTL2 (ENSNFUG00015018832) #22	phf5a (ENSNFUG00015018826) #28	TEFA (ENSNFUG00015018821) #26	ZC3H7B (ENSNFUG00015018799) #25	RANGAP1 (ENSNFUG00015018710) #24	chadlb (ENSNFUG00015018697)	GET4 (ENSNFUG00015018662)	C12H16ORF62 (ENSNFUG00015018337)	zdhhc16b (ENSNFUG00015018329)	MMS19 (ENSNFUG00015017663)	UBTD1B (ENSNFUG00015017624)	ENSNFUG00015017614	rbp3 (ENSNFUG00015017608)	ENSNFUG00015017601	gdf2 (ENSNFUG00015017597)	GDF10B (ENSNFUG00015017594)
Mangrove rivulus	MODERN SPECIES	599												josd1 (ENSKMAG00000006615)	ENSKMAG00000006587	EP300 (ENSKMAG00000006526) #20	ENSKMAG00000006497	ENSKMAG00000006482 #22
Ovalentaria_B	ANCESTRAL SPECIES	7								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pomacentridae	ANCESTRAL SPECIES	182											ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31
Pomacentridae_A	ANCESTRAL SPECIES	214											ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31
Amphiprion	ANCESTRAL SPECIES	254											ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31
Clown anemonefish	MODERN SPECIES	1418										ENSAOCG00000002784	desi1b (ENSAOCG00000002807) #33	xrcc6 (ENSAOCG00000021344) #34	josd1 (ENSAOCG00000021330)	ENSAOCG00000021307	EP300 (ENSAOCG00000021276) #20	l3mbtl2 (ENSAOCG00000021254) #22	chadlb (ENSAOCG00000021226)	rangap1b (ENSAOCG00000021138) #24	ZC3H7B (ENSAOCG00000021081) #25	tefa (ENSAOCG00000020967) #26	phf5a (ENSAOCG00000020917) #28	aco2 (ENSAOCG00000020887) #29	csdc2a (ENSAOCG00000020795) #31	ENSAOCG00000020758	ENSAOCG00000020662	ENSAOCG00000020520	ENSAOCG00000020504	arl8 (ENSAOCG00000020462)	maf1b (ENSAOCG00000020422)	zfand1 (ENSAOCG00000020403)	chmp4c (ENSAOCG00000020395)
Orange clownfish	MODERN SPECIES	25										ENSAPEG00000020779	desi1b (ENSAPEG00000020729) #33	xrcc6 (ENSAPEG00000020712) #34	josd1 (ENSAPEG00000020682)	ENSAPEG00000020659	EP300 (ENSAPEG00000020628) #20	l3mbtl2 (ENSAPEG00000020506) #22	chadlb (ENSAPEG00000020436)	rangap1b (ENSAPEG00000020382) #24	ZC3H7B (ENSAPEG00000020311) #25	tefa (ENSAPEG00000020278) #26	phf5a (ENSAPEG00000020260) #28	aco2 (ENSAPEG00000020171) #29	csdc2a (ENSAPEG00000020151) #31
Spiny chromis	MODERN SPECIES	348											ENSAPOG00000012724	xrcc6 (ENSAPOG00000012704) #34	josd1 (ENSAPOG00000012599)	ENSAPOG00000012563	EP300 (ENSAPOG00000012548) #20	l3mbtl2 (ENSAPOG00000012528) #22	chadlb (ENSAPOG00000012489)	rangap1b (ENSAPOG00000012345) #24	ENSAPOG00000012333	brinp3a.1 (ENSAPOG00000012311)
Bicolor damselfish	MODERN SPECIES	1812															EP300 (ENSSPAG00000022894) #20	l3mbtl2 (ENSSPAG00000022900) #22	ENSSPAG00000022913	chadlb (ENSSPAG00000022921)	rangap1b (ENSSPAG00000022924) #24	ZC3H7B (ENSSPAG00000022933) #25	tefa (ENSSPAG00000022946) #26	phf5a (ENSSPAG00000022955) #28	aco2 (ENSSPAG00000022958) #29	csdc2a (ENSSPAG00000022972) #31
Cichlidae	ANCESTRAL SPECIES	28	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT01070000254302	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Midas cichlid	MODERN SPECIES	194	rbp3 (ENSACIG00000021020)	ENSACIG00000021047	ubtd1b (ENSACIG00000021104)	mms19 (ENSACIG00000021123)	zdhhc16b (ENSACIG00000021174)	vps35l (ENSACIG00000021198)	get4 (ENSACIG00000021253)	xrcc6 (ENSACIG00000021277) #34	desi1b (ENSACIG00000021296) #33	ENSACIG00000021313	mrtfab (ENSACIG00000021331) ##13	josd1 (ENSACIG00000021386)	ENSACIG00000021398	ENSACIG00000021411 #20	ENSACIG00000021474	ENSACIG00000021488 #22	chadlb (ENSACIG00000021497)	rangap1b (ENSACIG00000021521) #24	ZC3H7B (ENSACIG00000021548) #25	tefa (ENSACIG00000021613) #26	phf5a (ENSACIG00000021628) #28	aco2 (ENSACIG00000021636) #29	csdc2a (ENSACIG00000021654) #31	ENSACIG00000021664	ENSACIG00000021715	PLBD1 (ENSACIG00000021850)	cby1 (ENSACIG00000021908)	pdap1a (ENSACIG00000021921)	SH3BP1 (ENSACIG00000021950)	ENSACIG00000021970	ENSACIG00000021975
Pseudocrenilabrinae	ANCESTRAL SPECIES	9	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	7	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Haplochromini	ANCESTRAL SPECIES	22	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Haplochromini_A	ANCESTRAL SPECIES	24	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
P. nyererei	MODERN SPECIES	300	RBP3 (ENSPNYG00000003191)	rbp3 (ENSPNYG00000003198)	ENSPNYG00000003239	ubtd1b (ENSPNYG00000003316)	mms19 (ENSPNYG00000003347)	zdhhc16b (ENSPNYG00000003524)	vps35l (ENSPNYG00000003668)	get4 (ENSPNYG00000003783)	xrcc6 (ENSPNYG00000003815) #34	desi1b (ENSPNYG00000003863) #33	ENSPNYG00000003881	mrtfab (ENSPNYG00000003895) ##13	josd1 (ENSPNYG00000003924)	CBX7 (ENSPNYG00000003947)	EP300 (ENSPNYG00000004005) #20	l3mbtl2 (ENSPNYG00000004122) #22	ENSPNYG00000004155	chadlb (ENSPNYG00000004177)	rangap1b (ENSPNYG00000004258) #24	ZC3H7B (ENSPNYG00000004322) #25	tefa (ENSPNYG00000004348) #26	phf5a (ENSPNYG00000004375) #28	aco2 (ENSPNYG00000004399) #29	csdc2a (ENSPNYG00000004457) #31	ENSPNYG00000004477	ENSPNYG00000004528	PLBD1 (ENSPNYG00000004547)	cby1 (ENSPNYG00000004563)	pdap1a (ENSPNYG00000004577)	ENSPNYG00000004581	ENSPNYG00000004596
Haplochromini_B	ANCESTRAL SPECIES	24	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00650000094704	ENSGT00940000153239.B #34	ENSGT00730000111100.a.b #33	ENSGT00940000163663.A.b	ENSGT00950000182979.a.a.a.b ##13	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Eastern happy	MODERN SPECIES	20	rbp3 (ENSACLG00000018197)	ENSACLG00000018219	ubtd1b (ENSACLG00000018265)	mms19 (ENSACLG00000018291)	zdhhc16b (ENSACLG00000018343)	vps35l (ENSACLG00000018376)	get4 (ENSACLG00000018508)	ENSACLG00000018598	xrcc6 (ENSACLG00000018608) #34	desi1b (ENSACLG00000018683) #33	ENSACLG00000018698	mrtfab (ENSACLG00000018713) ##13	josd1 (ENSACLG00000018856)	ENSACLG00000018872	EP300 (ENSACLG00000018899) #20	l3mbtl2 (ENSACLG00000018958) #22	ENSACLG00000019013	chadlb (ENSACLG00000019020)	rangap1b (ENSACLG00000019057) #24	ZC3H7B (ENSACLG00000019120) #25	tefa (ENSACLG00000019138) #26	phf5a (ENSACLG00000019161) #28	aco2 (ENSACLG00000019179) #29	csdc2a (ENSACLG00000019286) #31	ENSACLG00000019316	ENSACLG00000019454	PLBD1 (ENSACLG00000019493)	cby1 (ENSACLG00000019550)	pdap1a (ENSACLG00000019580)	ENSACLG00000019625	ENSACLG00000019678
Burton s mouthbrooder	MODERN SPECIES	507	RBP3 (ENSHBUG00000023733)	rbp3 (ENSHBUG00000023727)	ENSHBUG00000023696	ubtd1b (ENSHBUG00000023588)	mms19 (ENSHBUG00000023560)	zdhhc16b (ENSHBUG00000023543)	vps35l (ENSHBUG00000023516)	get4 (ENSHBUG00000023309)	xrcc6 (ENSHBUG00000023281) #34	desi1b (ENSHBUG00000023264) #33	ENSHBUG00000023228	mrtfab (ENSHBUG00000023207) ##13	josd1 (ENSHBUG00000023156)	ENSHBUG00000023150	EP300 (ENSHBUG00000023127) #20	l3mbtl2 (ENSHBUG00000023020) #22	ENSHBUG00000022986	chadlb (ENSHBUG00000022961)
Lyretail cichlid	MODERN SPECIES	475	RBP3 (ENSNBRG00000003715)	rbp3 (ENSNBRG00000003723)	ENSNBRG00000003741	ubtd1b (ENSNBRG00000003815)	mms19 (ENSNBRG00000003847)	zdhhc16b (ENSNBRG00000003955)	vps35l (ENSNBRG00000003968)	get4 (ENSNBRG00000004065)	xrcc6 (ENSNBRG00000004125) #34	desi1b (ENSNBRG00000004326) #33	ENSNBRG00000004339	mrtfab (ENSNBRG00000004360) ##13	josd1 (ENSNBRG00000004396)	ENSNBRG00000004419	EP300 (ENSNBRG00000004472) #20	l3mbtl2 (ENSNBRG00000004591) #22	ENSNBRG00000004606	chadlb (ENSNBRG00000004619)	rangap1b (ENSNBRG00000004652) #24	ZC3H7B (ENSNBRG00000004708) #25	tefa (ENSNBRG00000004722) #26	phf5a (ENSNBRG00000004747) #28	aco2 (ENSNBRG00000004766) #29	csdc2a (ENSNBRG00000004848) #31	ENSNBRG00000004863	ENSNBRG00000004953	PLBD1 (ENSNBRG00000004963)	cby1 (ENSNBRG00000005004)	pdap1a (ENSNBRG00000005023)	ENSNBRG00000005057	ENSNBRG00000005076
Nile tilapia	MODERN SPECIES	20	rbp3 (ENSONIG00000033972)	ENSONIG00000019735	ubtd1b (ENSONIG00000019734)	mms19 (ENSONIG00000019726)	zdhhc16b (ENSONIG00000029550)	vps35l (ENSONIG00000019720)	get4 (ENSONIG00000019718)	ENSONIG00000030173	xrcc6 (ENSONIG00000019715) #34	desi1b (ENSONIG00000019714) #33	ENSONIG00000038912	mrtfab (ENSONIG00000019711) ##13	josd1 (ENSONIG00000019707)	cbx7 (ENSONIG00000040830)	EP300 (ENSONIG00000019702) #20	l3mbtl2 (ENSONIG00000019700) #22	ENSONIG00000030167	chadlb (ENSONIG00000019699)	chadlb (ENSONIG00000031087)	rangap1b (ENSONIG00000019697) #24	ZC3H7B (ENSONIG00000019695) #25	ENSONIG00000036143	tefa (ENSONIG00000019694) #26	phf5a (ENSONIG00000040142) #28	aco2 (ENSONIG00000019690) #29	csdc2a (ENSONIG00000028637) #31	ENSONIG00000030486	ENSONIG00000019687	ENSONIG00000019686	PLBD1 (ENSONIG00000019685)	cby1 (ENSONIG00000019684)
Percomorphaceae_C	ANCESTRAL SPECIES	14	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00990000204107	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369
Eupercaria	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00940000159802	ENSGT00390000014726.c.a	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b #10
Tetraodon	MODERN SPECIES	13	gdf10b (ENSTNIG00000004705)	gdf2 (ENSTNIG00000004704)	rbp3 (ENSTNIG00000004703)	ENSTNIG00000004702	ubtd1b (ENSTNIG00000004701)	mms19 (ENSTNIG00000004700)	zdhhc16b (ENSTNIG00000004699)	vps35l (ENSTNIG00000004698)	get4 (ENSTNIG00000004697)	mrtfab (ENSTNIG00000012948) ##13	ENSTNIG00000001284	xrcc6 (ENSTNIG00000012947) #34	josd1 (ENSTNIG00000012946)	ENSTNIG00000012945	EP300 (ENSTNIG00000012944) #20	l3mbtl2 (ENSTNIG00000012943) #22	chadlb (ENSTNIG00000012942)	rangap1b (ENSTNIG00000002397) #24	ZC3H7B (ENSTNIG00000012941) #25	tefa (ENSTNIG00000012940) #26	phf5a (ENSTNIG00000012939) #28	aco2 (ENSTNIG00000012938) #29	csdc2a (ENSTNIG00000012937) #31	ENSTNIG00000012936	ENSTNIG00000012935	cby1 (ENSTNIG00000012934)	SH3BP1 (ENSTNIG00000012933)	ENSTNIG00000012932	ENSTNIG00000012930 #10	tmem184ba (ENSTNIG00000012929)	maff (ENSTNIG00000001100)
Fugu	MODERN SPECIES		gdf2 (ENSTRUG00000017118)	ENSTRUG00000017116	rbp3 (ENSTRUG00000020642)	ENSTRUG00000017110	ubtd1b (ENSTRUG00000022232)	mms19 (ENSTRUG00000017103)	zdhhc16b (ENSTRUG00000017097)	vps35l (ENSTRUG00000017090)	get4 (ENSTRUG00000017084)	mrtfab (ENSTRUG00000031201) ##13	ENSTRUG00000023990	xrcc6 (ENSTRUG00000017070) #34	josd1 (ENSTRUG00000017067)	ENSTRUG00000033494	EP300 (ENSTRUG00000017051) #20	l3mbtl2 (ENSTRUG00000017044) #22	chadlb (ENSTRUG00000017043)	rangap1b (ENSTRUG00000017035) #24	ZC3H7B (ENSTRUG00000017030) #25	tefa (ENSTRUG00000022293) #26	phf5a (ENSTRUG00000030258) #28	aco2 (ENSTRUG00000017021) #29	csdc2a (ENSTRUG00000028048) #31	ENSTRUG00000017007	ENSTRUG00000022094	cby1 (ENSTRUG00000017001)	ENSTRUG00000017000	pdap1a (ENSTRUG00000025459)	ENSTRUG00000016993	ENSTRUG00000021426	ENSTRUG00000016989
Eupecaria_A	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Ballan wrasse	MODERN SPECIES	225								mrtfab (ENSLBEG00000002808) ##13	ENSLBEG00000002764	desi1b (ENSLBEG00000002733) #33	xrcc6 (ENSLBEG00000002691) #34	ENSLBEG00000002655	josd1 (ENSLBEG00000002624)	ENSLBEG00000002577	EP300 (ENSLBEG00000002487) #20	l3mbtl2 (ENSLBEG00000002456) #22	chadlb (ENSLBEG00000002434)	rangap1b (ENSLBEG00000002303) #24	ENSLBEG00000002272	ZC3H7B (ENSLBEG00000002212) #25	tefa (ENSLBEG00000002171) #26	phf5a (ENSLBEG00000002141) #28	aco2 (ENSLBEG00000002060) #29	csdc2a (ENSLBEG00000002005) #31	ENSLBEG00000001763	ENSLBEG00000001676	PLBD1 (ENSLBEG00000001605)	cby1 (ENSLBEG00000001581)	pdap1a (ENSLBEG00000001543)	ENSLBEG00000001514	ENSLBEG00000001487
Eupecaria_B	ANCESTRAL SPECIES	3	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Eupecaria_C	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698	ENSGT00940000155813.i.b #10
European seabass	MODERN SPECIES	11	RBP3 (ENSDLAG00005017198)	rbp3 (ENSDLAG00005017214)	ENSDLAG00005017225	ubtd1b (ENSDLAG00005017291)	mms19 (ENSDLAG00005017304)	zdhhc16b (ENSDLAG00005017597)	ENSDLAG00005017644	ENSDLAG00005018874	ENSDLAG00005018943 ##13	ENSDLAG00005018987	desi1b (ENSDLAG00005026916) #33	xrcc6 (ENSDLAG00005019010) #34	josd1 (ENSDLAG00005033772)	ENSDLAG00005033106	ENSDLAG00005019268 #20	l3mbtl2 (ENSDLAG00005019488) #22	ENSDLAG00005019512	chadlb (ENSDLAG00005019521)	rangap1b (ENSDLAG00005027546) #24	ZC3H7B (ENSDLAG00005019560) #25	tefa (ENSDLAG00005019578) #26	phf5a (ENSDLAG00005019582) #28	aco2 (ENSDLAG00005019603) #29	CSDC2 (ENSDLAG00005033654) #31	ENSDLAG00005019682	ENSDLAG00005020252	pvalb3 (ENSDLAG00005020292)	ENSDLAG00005020303	bhlha15 (ENSDLAG00005033943)	ENSDLAG00005020318	baiap2l1a (ENSDLAG00005020402)
Large yellow croaker	MODERN SPECIES	488	ENSLCRG00005009500	ubtd1b (ENSLCRG00005009499)	mms19 (ENSLCRG00005008863)	zdhhc16b (ENSLCRG00005008858)	vps35l (ENSLCRG00005008733)	get4 (ENSLCRG00005008718)	mrtfab (ENSLCRG00005008710) ##13	ENSLCRG00005008707	desi1b (ENSLCRG00005008706) #33	xrcc6 (ENSLCRG00005008686) #34	ENSLCRG00005008685	josd1 (ENSLCRG00005008683)	ENSLCRG00005008682	EP300 (ENSLCRG00005007933) #20	ENSLCRG00005007921	l3mbtl2 (ENSLCRG00005007917) #22	chadlb (ENSLCRG00005007914)	rangap1b (ENSLCRG00005007889) #24	ZC3H7B (ENSLCRG00005007872) #25	tefa (ENSLCRG00005007867) #26	phf5a (ENSLCRG00005007856) #28	aco2 (ENSLCRG00005007240) #29	ENSLCRG00005006906	ENSLCRG00005006897	cby1 (ENSLCRG00005006895)	pdap1a (ENSLCRG00005006893)	ENSLCRG00005006892	ENSLCRG00005006889	ENSLCRG00005006885	csnk1e (ENSLCRG00005006857)	ENSLCRG00005006851 #10
Gilthead seabream	MODERN SPECIES	12	ubtd1b (ENSSAUG00010002664)	mms19 (ENSSAUG00010002697)	ENSSAUG00010002728	get4 (ENSSAUG00010002741)	vps35l (ENSSAUG00010002925)	ENSSAUG00010003265	zdhhc16b (ENSSAUG00010003273)	mrtfab (ENSSAUG00010003284) ##13	ENSSAUG00010003294	desi1b (ENSSAUG00010003304) #33	xrcc6 (ENSSAUG00010003319) #34	ENSSAUG00010003444	josd1 (ENSSAUG00010003448)	ENSSAUG00010003460	EP300 (ENSSAUG00010003472) #20	l3mbtl2 (ENSSAUG00010003551) #22	chadlb (ENSSAUG00010003657)	rangap1b (ENSSAUG00010003677) #24	ZC3H7B (ENSSAUG00010003702) #25	tefa (ENSSAUG00010003722) #26	phf5a (ENSSAUG00010003737) #28	aco2 (ENSSAUG00010003770) #29	csdc2a (ENSSAUG00010003786) #31	ENSSAUG00010003819	ENSSAUG00010006505	PLBD1 (ENSSAUG00010006533)	cby1 (ENSSAUG00010006885)	pdap1a (ENSSAUG00010006886)	ENSSAUG00010006889	ENSSAUG00010006894	ENSSAUG00010006898
Perciformes	ANCESTRAL SPECIES	9	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Cottioidei	ANCESTRAL SPECIES	12								ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	5	DAGLB (ENSGACG00000004974)	get4 (ENSGACG00000004961)	vps35l (ENSGACG00000004948)	zdhhc16b (ENSGACG00000004937)	mms19 (ENSGACG00000004915)	ubtd1b (ENSGACG00000004908)	ENSGACG00000004906	rbp3 (ENSGACG00000004900)	desi1b (ENSGACG00000004894) #33	xrcc6 (ENSGACG00000004868) #34	ENSGACG00000004865	josd1 (ENSGACG00000004862)	ENSGACG00000004855	EP300 (ENSGACG00000004836) #20	ENSGACG00000004832 #22	l3mbtl2 (ENSGACG00000004829) #22	chadlb (ENSGACG00000004821)	rangap1b (ENSGACG00000004810) #24	ZC3H7B (ENSGACG00000004799) #25	tefa (ENSGACG00000004793) #26	phf5a (ENSGACG00000004777) #28	aco2 (ENSGACG00000004686) #29	csdc2a (ENSGACG00000004665) #31	ENSGACG00000004649	ENSGACG00000004643	PLBD1 (ENSGACG00000004637)	cby1 (ENSGACG00000004626)	pdap1a (ENSGACG00000004617)	ENSGACG00000004601	ENSGACG00000004597	ENSGACG00000004592
Stickleback	MODERN SPECIES	5	SPAG9 (ENSGACG00000004995)	DAGLB (ENSGACG00000004974)	get4 (ENSGACG00000004961)	vps35l (ENSGACG00000004948)	zdhhc16b (ENSGACG00000004937)	mms19 (ENSGACG00000004915)	ubtd1b (ENSGACG00000004908)	ENSGACG00000004906	rbp3 (ENSGACG00000004900)	desi1b (ENSGACG00000004894) #33	xrcc6 (ENSGACG00000004868) #34	ENSGACG00000004865	josd1 (ENSGACG00000004862)	ENSGACG00000004855	EP300 (ENSGACG00000004836) #20	ENSGACG00000004832 #22	l3mbtl2 (ENSGACG00000004829) #22	chadlb (ENSGACG00000004821)	rangap1b (ENSGACG00000004810) #24	ZC3H7B (ENSGACG00000004799) #25	tefa (ENSGACG00000004793) #26	phf5a (ENSGACG00000004777) #28	aco2 (ENSGACG00000004686) #29	csdc2a (ENSGACG00000004665) #31	ENSGACG00000004649	ENSGACG00000004643	PLBD1 (ENSGACG00000004637)	cby1 (ENSGACG00000004626)	pdap1a (ENSGACG00000004617)	ENSGACG00000004601	ENSGACG00000004597
Lumpfish	MODERN SPECIES	10	gspt1 (ENSCLMG00005001831)	tomm22 (ENSCLMG00005001807)	maff (ENSCLMG00005001805)	tmem184ba (ENSCLMG00005001803)	csnk1e (ENSCLMG00005001455)	ENSCLMG00005001407 #10	ENSCLMG00005001388	mrtfab (ENSCLMG00005022667) ##13	ENSCLMG00005022665	desi1b (ENSCLMG00005022664) #33	xrcc6 (ENSCLMG00005022659) #34	ENSCLMG00005022650	josd1 (ENSCLMG00005022649)	ENSCLMG00005022647	EP300 (ENSCLMG00005022587) #20	l3mbtl2 (ENSCLMG00005022573) #22	chadlb (ENSCLMG00005022570)	rangap1b (ENSCLMG00005022554) #24	ZC3H7B (ENSCLMG00005022550) #25	tefa (ENSCLMG00005022548) #26	phf5a (ENSCLMG00005022544) #28	aco2 (ENSCLMG00005022485) #29	csdc2a (ENSCLMG00005022484) #31	ENSCLMG00005022482	ENSCLMG00005022481	PLBD1 (ENSCLMG00005022480)	cby1 (ENSCLMG00005022478)	pdap1a (ENSCLMG00005022477)	ENSCLMG00005022470	ENSCLMG00005022465	get4 (ENSCLMG00005022457)
Perciformes_a	ANCESTRAL SPECIES	8	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000178257	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00990000204107	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Pike perch	MODERN SPECIES	143	ENSSLUG00000025749	rbp3 (ENSSLUG00000025750)	ENSSLUG00000025755	ubtd1b (ENSSLUG00000025761)	mms19 (ENSSLUG00000025769)	zdhhc16b (ENSSLUG00000025799)	vps35l (ENSSLUG00000025843)	get4 (ENSSLUG00000025894)	mrtfab (ENSSLUG00000025895) ##13	desi1b (ENSSLUG00000025896) #33	ENSSLUG00000025897	xrcc6 (ENSSLUG00000025907) #34	ENSSLUG00000025913	josd1 (ENSSLUG00000025914)	CBX7 (ENSSLUG00000025915)	l3mbtl2 (ENSSLUG00000025920) #22	chadlb (ENSSLUG00000025922)	rangap1b (ENSSLUG00000025925) #24	ZC3H7B (ENSSLUG00000025929) #25	tefa (ENSSLUG00000025932) #26	phf5a (ENSSLUG00000025933) #28	aco2 (ENSSLUG00000025939) #29	csdc2a (ENSSLUG00000025945) #31	ENSSLUG00000025948	ENSSLUG00000025950	PLBD1 (ENSSLUG00000025951)	cby1 (ENSSLUG00000002974)	pdap1a (ENSSLUG00000002997)	SH3BP1 (ENSSLUG00000003026)	ENSSLUG00000003143	ENSSLUG00000003165
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	252												ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	42														ENSCGOG00000019765	ENSCGOG00000019764	ENSCGOG00000019763 #22
Channel bull blenny	MODERN SPECIES	56												ENSCGOG00000006826	ENSCGOG00000006831	ENSCGOG00000006842	ENSCGOG00000006844 #22	ENSCGOG00000006847 #22
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	DUPLICATION
Channel bull blenny	MODERN SPECIES	95														ENSCGOG00000009642	ENSCGOG00000009644	l3mbtl2 (ENSCGOG00000009645) #22
Channel bull blenny	MODERN SPECIES	252													ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	10	tmem184ba (ENSCGOG00000012343)	maff (ENSCGOG00000012445)	tomm22 (ENSCGOG00000012448)	dmc1 (ENSCGOG00000012453)	gspt1 (ENSCGOG00000012478)	rsl1d1 (ENSCGOG00000012707)	ENSCGOG00000012709	EP300 (ENSCGOG00000012710) #20	josd1 (ENSCGOG00000012736)	ENSCGOG00000012739	xrcc6 (ENSCGOG00000012750) #34	desi1b (ENSCGOG00000013231) #33	ENSCGOG00000013232	ENSCGOG00000013234	ENSCGOG00000013237	l3mbtl2 (ENSCGOG00000013243) #22	zdhhc16b (ENSCGOG00000013255)	mms19 (ENSCGOG00000013268)	ubtd1b (ENSCGOG00000013674)	ENSCGOG00000013693	rbp3 (ENSCGOG00000013695)	ENSCGOG00000013697	gdf2 (ENSCGOG00000013700)	gdf10b (ENSCGOG00000013717)	ENSCGOG00000013726	ENSCGOG00000013731	ENSCGOG00000013734	mapk8b (ENSCGOG00000013828)	ARHGAP22 (ENSCGOG00000017599)	LRRC18 (ENSCGOG00000017660)	ENSCGOG00000017661
Channel bull blenny	MODERN SPECIES	252															ENSCGOG00000009977	l3mbtl2 (ENSCGOG00000009982) #22	ENSCGOG00000002615	ENSCGOG00000002637 #22	ENSCGOG00000002656 #22
Channel bull blenny	MODERN SPECIES	267											ENSCGOG00000004922	ENSCGOG00000004921	ENSCGOG00000004919	ENSCGOG00000004916	ENSCGOG00000004913	l3mbtl2 (ENSCGOG00000004864) #22
Channel bull blenny	MODERN SPECIES	56													ENSCGOG00000006826	ENSCGOG00000006831	ENSCGOG00000006842	ENSCGOG00000006844 #22	ENSCGOG00000006847 #22
Channel bull blenny	MODERN SPECIES	16	rad51 (ENSCGOG00000004192)	ENSCGOG00000004175	ENSCGOG00000004172	ENSCGOG00000004163	ENSCGOG00000004150	ENSCGOG00000004140	ENSCGOG00000004123	zfp36l1b (ENSCGOG00000004117)	ptger2b (ENSCGOG00000004108)	psmc6 (ENSCGOG00000003362)	cgrrf1 (ENSCGOG00000003342)	ddhd1b (ENSCGOG00000002803)	stxbp6l (ENSCGOG00000002729)	gjd2b (ENSCGOG00000008542)	meis2b (ENSCGOG00000008488)	l3mbtl2 (ENSCGOG00000007774) #22	ENSCGOG00000007746	ENSCGOG00000007737	kcnk10a (ENSCGOG00000007726)	kcnk10a (ENSCGOG00000007721)	kcnk10a (ENSCGOG00000007718)	ENSCGOG00000007711	tnfrsf21 (ENSCGOG00000007709)	cd2ap (ENSCGOG00000007694)	opn5 (ENSCGOG00000007692)	ptchd4 (ENSCGOG00000007689)	ENSCGOG00000007686	ENSCGOG00000007684	ENSCGOG00000007681	ENSCGOG00000007675	TAAR1 (ENSCGOG00000007671)
Percomorphaceae_D	ANCESTRAL SPECIES	13	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Anabantaria	ANCESTRAL SPECIES	18	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Anabantoidei	ANCESTRAL SPECIES	10	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Climbing perch	MODERN SPECIES	10	phf5a (ENSATEG00000007455) #28	tefa (ENSATEG00000025207) #26	ENSATEG00000007442	ENSATEG00000007345	csdc2a (ENSATEG00000026239) #31	ENSATEG00000025673	ENSATEG00000029855 ##13	ENSATEG00000026132	mrtfab (ENSATEG00000007179) ##13	desi1b (ENSATEG00000026392) #33	xrcc6 (ENSATEG00000007119) #34	ENSATEG00000007109	josd1 (ENSATEG00000007105)	ENSATEG00000027992	ENSATEG00000006944 #20	l3mbtl2 (ENSATEG00000006919) #22	chadlb (ENSATEG00000006910)	rangap1b (ENSATEG00000006838) #24	rangap1b (ENSATEG00000006586) #24	ZC3H7B (ENSATEG00000006539) #25	tefa (ENSATEG00000006521) #26	phf5a (ENSATEG00000006506) #28	aco2 (ENSATEG00000030073) #29	ENSATEG00000006353	ENSATEG00000006234	zdhhc16b (ENSATEG00000006217)	ubtd1b (ENSATEG00000027660)	ENSATEG00000006091	RBP3 (ENSATEG00000005990)	gdf2 (ENSATEG00000005979)	gdf10b (ENSATEG00000005975)
Siamese fighting fish	MODERN SPECIES	9	gdf2 (ENSBSLG00000023674)	rbp3 (ENSBSLG00000023668)	ubtd1b (ENSBSLG00000023622)	mms19 (ENSBSLG00000023434)	zdhhc16b (ENSBSLG00000023411)	vps35l (ENSBSLG00000023260)	get4 (ENSBSLG00000023194)	mrtfab (ENSBSLG00000023133) ##13	ENSBSLG00000023118	desi1b (ENSBSLG00000023110) #33	xrcc6 (ENSBSLG00000022780) #34	ENSBSLG00000022771	josd1 (ENSBSLG00000022770)	ENSBSLG00000022769	EP300 (ENSBSLG00000022112) #20	l3mbtl2 (ENSBSLG00000021995) #22	chadlb (ENSBSLG00000021966)	ENSBSLG00000021931	ENSBSLG00000021915	rangap1b (ENSBSLG00000021844) #24	ENSBSLG00000021685 #25	tefa (ENSBSLG00000021678) #26	phf5a (ENSBSLG00000021671) #28	aco2 (ENSBSLG00000021620) #29	csdc2a (ENSBSLG00000021611) #31	ENSBSLG00000021437	PLBD1 (ENSBSLG00000021424)	cby1 (ENSBSLG00000021404)	PLBD1 (ENSBSLG00000021324)	cby1 (ENSBSLG00000021302)	pdap1a (ENSBSLG00000021168)
Zig-zag eel	MODERN SPECIES	10	rbp3 (ENSMAMG00000002997)	ENSMAMG00000003038	UBTD1 (ENSMAMG00000027407)	mms19 (ENSMAMG00000003115)	zdhhc16b (ENSMAMG00000003147)	ENSMAMG00000003184	ENSMAMG00000003207	ENSMAMG00000003242 ##13	ENSMAMG00000003315	desi1b (ENSMAMG00000027199) #33	xrcc6 (ENSMAMG00000003368) #34	ENSMAMG00000003420	josd1 (ENSMAMG00000003443)	ENSMAMG00000003463	ENSMAMG00000003489 #20	l3mbtl2 (ENSMAMG00000003515) #22	ENSMAMG00000024639	chadlb (ENSMAMG00000003543)	rangap1b (ENSMAMG00000003552) #24	ZC3H7B (ENSMAMG00000003650) #25	tefa (ENSMAMG00000003725) #26	phf5a (ENSMAMG00000003744) #28	aco2 (ENSMAMG00000003762) #29	csdc2a (ENSMAMG00000003854) #31	ENSMAMG00000003866	ENSMAMG00000024757	ENSMAMG00000003943	cby1 (ENSMAMG00000004028)	pdap1a (ENSMAMG00000024443)	ENSMAMG00000004098	ENSMAMG00000004122
Carangaria	ANCESTRAL SPECIES	13	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Pleuronectoidei	ANCESTRAL SPECIES	6	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Tongue sole	MODERN SPECIES	18	ubtd1b (ENSCSEG00000020376)	mms19 (ENSCSEG00000020378)	zdhhc16b (ENSCSEG00000020386)	vps35l (ENSCSEG00000020390)	get4 (ENSCSEG00000020396)	mrtfab (ENSCSEG00000020403) ##13	ENSCSEG00000020419 ##13	ENSCSEG00000020421	desi1b (ENSCSEG00000020425) #33	xrcc6 (ENSCSEG00000020434) #34	ENSCSEG00000020440	josd1 (ENSCSEG00000020444)	ENSCSEG00000020449	EP300 (ENSCSEG00000020452) #20	ENSCSEG00000020474	l3mbtl2 (ENSCSEG00000020478) #22	chadlb (ENSCSEG00000020482)	rangap1b (ENSCSEG00000020486) #24	ZC3H7B (ENSCSEG00000020490) #25	tefa (ENSCSEG00000020497) #26	phf5a (ENSCSEG00000020499) #28	aco2 (ENSCSEG00000020501) #29	wbp2 (ENSCSEG00000020507)	ENSCSEG00000020518	mrpl38 (ENSCSEG00000020520)	ENSCSEG00000020524	FDXR (ENSCSEG00000020526)	narf (ENSCSEG00000000317)	cybc1 (ENSCSEG00000000320)	hexdc (ENSCSEG00000000330)	ogfod3 (ENSCSEG00000000351)
Turbot	MODERN SPECIES	9	rbp3 (ENSSMAG00000005877)	ENSSMAG00000005884	ubtd1b (ENSSMAG00000005951)	mms19 (ENSSMAG00000005975)	zdhhc16b (ENSSMAG00000006209)	ENSSMAG00000006283	ENSSMAG00000006357	ENSSMAG00000031000 ##13	ENSSMAG00000006443	desi1b (ENSSMAG00000006467) #33	xrcc6 (ENSSMAG00000006496) #34	ENSSMAG00000033260	josd1 (ENSSMAG00000023674)	ENSSMAG00000006575	ENSSMAG00000006608 #20	l3mbtl2 (ENSSMAG00000006666) #22	chadlb (ENSSMAG00000006710)	rangap1b (ENSSMAG00000006741) #24	ZC3H7B (ENSSMAG00000006961) #25	tefa (ENSSMAG00000007034) #26	phf5a (ENSSMAG00000007054) #28	aco2 (ENSSMAG00000007063) #29	csdc2a (ENSSMAG00000007134) #31	ENSSMAG00000007175	ENSSMAG00000007319	ENSSMAG00000007355	cby1 (ENSSMAG00000007381)	pdap1a (ENSSMAG00000007399)	ENSSMAG00000007424	ENSSMAG00000007439	ENSSMAG00000007450
Carangaria_A	ANCESTRAL SPECIES	5	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Seriola	ANCESTRAL SPECIES	1	ENSGT00390000014726.c.b	ENSGT00940000157727.x.a	ENSGT00940000158630.g.a.c	ENSGT00390000015583	ENSGT00940000155032.l	ENSGT00390000011343	ENSGT00390000015750	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT01070000254302	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Yellowtail amberjack	MODERN SPECIES	3252	ubtd1b (ENSSLDG00000010511)	mms19 (ENSSLDG00000010244)	zdhhc16b (ENSSLDG00000010182)	vps35l (ENSSLDG00000010117)	get4 (ENSSLDG00000010076)	ENSSLDG00000010052	ENSSLDG00000010037 ##13	ENSSLDG00000010024 ##13	ENSSLDG00000010010	desi1b (ENSSLDG00000009991) #33	xrcc6 (ENSSLDG00000009974) #34	ENSSLDG00000009956	josd1 (ENSSLDG00000009941)	ENSSLDG00000009911	EP300 (ENSSLDG00000009870) #20	l3mbtl2 (ENSSLDG00000009810) #22	chadlb (ENSSLDG00000009774)	rangap1b (ENSSLDG00000009736) #24	ZC3H7B (ENSSLDG00000009664) #25	tefa (ENSSLDG00000009635) #26	phf5a (ENSSLDG00000009619) #28	aco2 (ENSSLDG00000009538) #29	csdc2a (ENSSLDG00000009512) #31	ENSSLDG00000009203	ENSSLDG00000009137	PLBD1 (ENSSLDG00000009056)	cby1 (ENSSLDG00000009036)	pdap1a (ENSSLDG00000009017)	ENSSLDG00000008996	ENSSLDG00000008976	ENSSLDG00000008967
Greater amberjack	MODERN SPECIES	27	rbp3 (ENSSDUG00000006762)	ENSSDUG00000006785	ubtd1b (ENSSDUG00000006863)	ubtd1b (ENSSDUG00000007100)	mms19 (ENSSDUG00000007129)	zdhhc16b (ENSSDUG00000007237)	vps35l (ENSSDUG00000007265)	get4 (ENSSDUG00000007358)	mrtfab (ENSSDUG00000007393) ##13	ENSSDUG00000007510	desi1b (ENSSDUG00000007525) #33	xrcc6 (ENSSDUG00000007542) #34	josd1 (ENSSDUG00000007560)	ENSSDUG00000007573	EP300 (ENSSDUG00000007604) #20	l3mbtl2 (ENSSDUG00000007790) #22	ENSSDUG00000007839	chadlb (ENSSDUG00000007853)	rangap1b (ENSSDUG00000007886) #24	ZC3H7B (ENSSDUG00000007927) #25	tefa (ENSSDUG00000007978) #26	phf5a (ENSSDUG00000008019) #28	aco2 (ENSSDUG00000008036) #29	csdc2a (ENSSDUG00000008082) #31	ENSSDUG00000008101	ENSSDUG00000008135	PLBD1 (ENSSDUG00000008141)	cby1 (ENSSDUG00000008154)	pdap1a (ENSSDUG00000008170)	ENSSDUG00000008185	ENSSDUG00000008199
Barramundi perch	MODERN SPECIES	285										desi1b (ENSLCAG00010026482) #33	ENSLCAG00010026484	xrcc6 (ENSLCAG00010026491) #34	josd1 (ENSLCAG00010026501)	CBX7 (ENSLCAG00010026504)	ENSLCAG00010026520	l3mbtl2 (ENSLCAG00010026525) #22	chadlb (ENSLCAG00010026533)	rangap1b (ENSLCAG00010026538) #24	ZC3H7B (ENSLCAG00010026542) #25	tefa (ENSLCAG00010026549) #26	phf5a (ENSLCAG00010026552) #28	aco2 (ENSLCAG00010000167) #29	csdc2a (ENSLCAG00010000182) #31	ENSLCAG00010000198	ENSLCAG00010000218	ENSLCAG00010000272	cby1 (ENSLCAG00010000387)	ENSLCAG00010000397	ENSLCAG00010000403	ENSLCAG00010000408 #10	ENSLCAG00010000422 #10
Tiger tail seahorse	MODERN SPECIES	24	csnk1e (ENSHCOG00000011031)	ENSHCOG00000010549 #10	ENSHCOG00000010449	ENSHCOG00000010426	pdap1a (ENSHCOG00000000695)	cby1 (ENSHCOG00000010390)	PLBD1 (ENSHCOG00000010381)	ENSHCOG00000010314	ENSHCOG00000010290	csdc2a (ENSHCOG00000010202) #31	aco2 (ENSHCOG00000010190) #29	phf5a (ENSHCOG00000010129) #28	tefa (ENSHCOG00000010116) #26	CBX7 (ENSHCOG00000010097)	EP300 (ENSHCOG00000010078) #20	l3mbtl2 (ENSHCOG00000010008) #22	ENSHCOG00000009974	chadlb (ENSHCOG00000009959)	rangap1b (ENSHCOG00000009890) #24	ZC3H7B (ENSHCOG00000009865) #25	josd1 (ENSHCOG00000009852)	ENSHCOG00000009830	xrcc6 (ENSHCOG00000009821) #34	mrtfab (ENSHCOG00000009798) ##13	get4 (ENSHCOG00000009762)	vps35l (ENSHCOG00000009736)	zdhhc16b (ENSHCOG00000009671)	mms19 (ENSHCOG00000009664)	ubtd1b (ENSHCOG00000009648)	ENSHCOG00000009630	rbp3 (ENSHCOG00000009596)
Pinecone sodierfish	MODERN SPECIES	10	LMF1 (ENSMMDG00005010230)	sox8a (ENSMMDG00005009860)	ENSMMDG00005009799	COX19 (ENSMMDG00005009791)	ENSMMDG00005009789	RNPS1 (ENSMMDG00005009788)	ENSMMDG00005009785	ENSMMDG00005009784	mrtfab (ENSMMDG00005009780) ##13	ENSMMDG00005009776	desi1b (ENSMMDG00005009775) #33	xrcc6 (ENSMMDG00005009465) #34	josd1 (ENSMMDG00005009447)	CBX7 (ENSMMDG00005009442)	EP300 (ENSMMDG00005007777) #20	l3mbtl2 (ENSMMDG00005007754) #22	chadlb (ENSMMDG00005007750)	rangap1b (ENSMMDG00005007732) #24	ZC3H7B (ENSMMDG00005007730) #25	tefa (ENSMMDG00005007728) #26	phf5a (ENSMMDG00005007725) #28	aco2 (ENSMMDG00005007589) #29	ENSMMDG00005007581	csdc2a (ENSMMDG00005007576) #31	ENSMMDG00005007543	ENSMMDG00005007532	PLBD1 (ENSMMDG00005007527)	cby1 (ENSMMDG00005007526)	pdap1a (ENSMMDG00005007521)	SH3BP1 (ENSMMDG00005007516)	ENSMMDG00005007513
Cod	MODERN SPECIES	9	asah2 (ENSGMOG00000030487)	ENSGMOG00000018943	ENSGMOG00000029012	dkk1b (ENSGMOG00000037157)	noc3l (ENSGMOG00000007458)	ENSGMOG00000007474	ENSGMOG00000023741	ENSGMOG00000033808	ENSGMOG00000013318 #28	ENSGMOG00000013551	xrcc6 (ENSGMOG00000013524) #34	ENSGMOG00000024672	josd1 (ENSGMOG00000024543)	ENSGMOG00000013491	ENSGMOG00000013440 #20	l3mbtl2 (ENSGMOG00000013428) #22	chadlb (ENSGMOG00000013414)	rangap1b (ENSGMOG00000013380) #24	ZC3H7B (ENSGMOG00000013351) #25	tefa (ENSGMOG00000028335) #26	aco2 (ENSGMOG00000001946) #29	csdc2a (ENSGMOG00000023085) #31	ENSGMOG00000013257	ENSGMOG00000013246	ENSGMOG00000013233	cby1 (ENSGMOG00000013225)	pdap1a (ENSGMOG00000013218)	ENSGMOG00000013196	ENSGMOG00000030881	ENSGMOG00000013166	ENSGMOG00000013125 #10
Otomorpha	ANCESTRAL SPECIES	1	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.n #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Clupeiformes	ANCESTRAL SPECIES	5	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00650000094704	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00390000018542.a.a #25	ENSGT00940000156578.a.b #26	ENSGT00390000018518 #28	ENSGT00940000154892.m.b #29	ENSGT00390000000022.b.a.b #31	ENSGT00940000155955.C.i.b	ENSGT00940000167326	ENSGT00530000063509.A.h	ENSGT00940000153137.b	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b	ENSGT00390000013698
Atlantic herring	MODERN SPECIES	15	ENSCHAG00000013891	snx11 (ENSCHAG00000013883)	arsg (ENSCHAG00000013856)	slc16a6a (ENSCHAG00000013846)	AMZ2 (ENSCHAG00000013631)	gna13a (ENSCHAG00000013606)	rgs9b (ENSCHAG00000012811)	mrtfab (ENSCHAG00000012744) ##13	ENSCHAG00000012726	desi1b (ENSCHAG00000012716) #33	xrcc6 (ENSCHAG00000012490) #34	ENSCHAG00000012482	josd1 (ENSCHAG00000012467)	ENSCHAG00000012460	EP300 (ENSCHAG00000010123) #20	l3mbtl2 (ENSCHAG00000009331) #22	chadlb (ENSCHAG00000009315)	rangap1b (ENSCHAG00000009208) #24	ZC3H7B (ENSCHAG00000009150) #25	tefa (ENSCHAG00000009131) #26	phf5a (ENSCHAG00000009088) #28	ENSCHAG00000009075	aco2 (ENSCHAG00000007164) #29	csdc2a (ENSCHAG00000007095) #31	ENSCHAG00000007018	ENSCHAG00000003753	ENSCHAG00000003583	PLBD1 (ENSCHAG00000002885)	cby1 (ENSCHAG00000002661)	slc16a8 (ENSCHAG00000002475)	ENSCHAG00000027071
Denticle herring	MODERN SPECIES	18	pgp (ENSDCDG00000029291)	zdhhc4 (ENSDCDG00000029287)	grid2ipb (ENSDCDG00000029212)	arhgap17a (ENSDCDG00000029142)	snx11 (ENSDCDG00000029135)	slc16a6a (ENSDCDG00000029132)	ENSDCDG00000029128	gna13a (ENSDCDG00000029125)	rgs9b (ENSDCDG00000028322)	mrtfab (ENSDCDG00000028306) ##13	ENSDCDG00000028304	xrcc6 (ENSDCDG00000028302) #34	josd1 (ENSDCDG00000028300)	ENSDCDG00000028297	EP300 (ENSDCDG00000028292) #20	l3mbtl2 (ENSDCDG00000028289) #22	chadlb (ENSDCDG00000028284)	ZC3H7B (ENSDCDG00000028270) #25	tefa (ENSDCDG00000028260) #26	phf5a (ENSDCDG00000028255) #28	ENSDCDG00000028244	cby1 (ENSDCDG00000028242)	pdap1a (ENSDCDG00000028241)	ENSDCDG00000028239	ENSDCDG00000028237	ENSDCDG00000028236	memo1 (ENSDCDG00000028225)	ENSDCDG00000028219	VIT (ENSDCDG00000028212)	ENSDCDG00000028210	ENSDCDG00000028209
Otophysi	ANCESTRAL SPECIES		ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #31	ENSGT00940000154892.n #29	ENSGT00390000018518 #28	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Characiphysae	ANCESTRAL SPECIES	1	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #31	ENSGT00940000154892.n #29	ENSGT00390000018518 #28	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Channel catfish	MODERN SPECIES	4	ENSIPUG00000000624	snx11 (ENSIPUG00000000637)	arsg (ENSIPUG00000000690)	slc16a6 (ENSIPUG00000000700)	AMZ2 (ENSIPUG00000000701)	GNA13 (ENSIPUG00000000718)	rgs9b (ENSIPUG00000000729)	mrtfab (ENSIPUG00000000739) ##13	ENSIPUG00000000754	desi1b (ENSIPUG00000000760) #33	xrcc6 (ENSIPUG00000000767) #34	josd1 (ENSIPUG00000000780)	ENSIPUG00000000790	ENSIPUG00000000795	EP300 (ENSIPUG00000000806) #20	l3mbtl2 (ENSIPUG00000000886) #22	chadl (ENSIPUG00000000903)	rangap1b (ENSIPUG00000000910) #24	kctd17 (ENSIPUG00000001013)	GUCY2C (ENSIPUG00000001043)	CSDC2 (ENSIPUG00000001089) #31	aco2 (ENSIPUG00000001101) #29	phf5a (ENSIPUG00000001222) #28	TEF (ENSIPUG00000001239) #26	ENSIPUG00000001283 #25	cby1 (ENSIPUG00000001373)	slc16a8 (ENSIPUG00000001384)	pdap1a (ENSIPUG00000001396)	SH3BP1 (ENSIPUG00000001411)	ENSIPUG00000001458	ENSIPUG00000001483
Characiphysae_b	ANCESTRAL SPECIES	3	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #31	ENSGT00940000154892.n #29	ENSGT00390000018518 #28	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Characoidei	ANCESTRAL SPECIES	6	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00530000063996.a	ENSGT00940000157054	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24
Red-bellied piranha	MODERN SPECIES	1177													josd1 (ENSPNAG00000019371)	ENSPNAG00000019469	EP300 (ENSPNAG00000019634) #20	l3mbtl2 (ENSPNAG00000019694) #22	chadlb (ENSPNAG00000019709)	rangap1b (ENSPNAG00000019718) #24
Mexicana tetra	MODERN SPECIES	19	stx4 (ENSAMXG00000030393)	ENSAMXG00000008153	snx11 (ENSAMXG00000034430)	arsg (ENSAMXG00000007957)	slc16a6a (ENSAMXG00000007885)	AMZ2 (ENSAMXG00000039045)	gna13a (ENSAMXG00000033589)	rgs9b (ENSAMXG00000007688)	mrtfab (ENSAMXG00000007612) ##13	ENSAMXG00000037949	desi1b (ENSAMXG00000030899) #33	xrcc6 (ENSAMXG00000007545) #34	josd1 (ENSAMXG00000034284)	ENSAMXG00000007494	EP300 (ENSAMXG00000007487) #20	l3mbtl2 (ENSAMXG00000018021) #22	chadlb (ENSAMXG00000007483)	rangap1b (ENSAMXG00000007477) #24	ENSAMXG00000015921	adprm (ENSAMXG00000041518)	adprm (ENSAMXG00000031575)	map2k4b (ENSAMXG00000015804)	MYOCD (ENSAMXG00000036216) ##13	DNAH17 (ENSAMXG00000015711)	SHISA6 (ENSAMXG00000015689)	ENSAMXG00000029479	foxk2a (ENSAMXG00000034378)	wdr45b (ENSAMXG00000039426)	mrpl58 (ENSAMXG00000034224)	si:ch1073-357b18.4 (ENSAMXG00000037173)	RNF213 (ENSAMXG00000018097)
Electric eel	MODERN SPECIES	94	stx4 (ENSEEEG00000011559)	ENSEEEG00000011557	snx11 (ENSEEEG00000011554)	arsg (ENSEEEG00000011549)	slc16a6a (ENSEEEG00000011538)	AMZ2 (ENSEEEG00000011533)	gna13a (ENSEEEG00000011519)	rgs9b (ENSEEEG00000011513)	rgs9b (ENSEEEG00000011512)	mrtfab (ENSEEEG00000011506) ##13	ENSEEEG00000011503	desi1b (ENSEEEG00000011501) #33	xrcc6 (ENSEEEG00000011488) #34	josd1 (ENSEEEG00000011487)	ENSEEEG00000011486	l3mbtl2 (ENSEEEG00000011299) #22	chadlb (ENSEEEG00000011292)	rangap1b (ENSEEEG00000011276) #24	ENSEEEG00000011272	GUCY2C (ENSEEEG00000011149)	csdc2a (ENSEEEG00000011143) #31	aco2 (ENSEEEG00000011123) #29	phf5a (ENSEEEG00000011117) #28	tefa (ENSEEEG00000011115) #26	ZC3H7B (ENSEEEG00000011114) #25	cby1 (ENSEEEG00000011111)	pdap1a (ENSEEEG00000011110)	ENSEEEG00000011049	ENSEEEG00000011041	ENSEEEG00000011036	ENSEEEG00000011034 #10
Cyprinoidei	ANCESTRAL SPECIES	26	ENSGT00390000007843	ENSGT00950000183025.a	ENSGT01030000234627.a.b.b	ENSGT00940000166841	ENSGT00940000160113	ENSGT00940000159093	ENSGT00940000155575.i.a	ENSGT00940000156505.s	ENSGT00950000182979.a.a.a.b ##13	ENSGT00940000163663.A.b	ENSGT00730000111100.a.b #33	ENSGT00940000153239.B #34	ENSGT00390000009228.b	ENSGT00940000158365.f.a	ENSGT00940000155497.a.b #20	ENSGT00940000153840.a.b #22	ENSGT00940000165277.a	ENSGT00440000039203.i #24	ENSGT00530000063509.A.h	ENSGT00940000167326	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b #31	ENSGT00940000154892.n #29	ENSGT00390000018518 #28	ENSGT00940000156578.a.b #26	ENSGT00390000018542.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934	ENSGT00390000018509.b	ENSGT00940000158369	ENSGT00940000160068.a.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	231	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a ##13	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #33	ENSGT00940000153239.B.g #34	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b #20	ENSGT00940000153840.a.b.i #22	ENSGT00440000039203.i.e #24	ENSGT00940000167326.d	ENSGT00390000000022.b.a.b.a #31	ENSGT00940000154892.n.d #29	ENSGT00390000018518.nb.a #28	ENSGT00940000156578.a.b.b #26	ENSGT00390000018542.a.a.b #25
Cyprininae_a	ANCESTRAL SPECIES	37	ENSGT01030000234627.a.b.b.c	ENSGT00940000166841.a	ENSGT00940000160113.h	ENSGT00940000159093.f	ENSGT00940000155575.i.a.e	ENSGT00530000063996.a.a.b	ENSGT00940000157054.u.a.a	ENSGT00940000156505.s.d	ENSGT00950000182979.a.a.a.b.a ##13	ENSGT00940000163663.A.b.a	ENSGT00730000111100.a.b.c #33	ENSGT00940000153239.B.g #34	ENSGT00390000009228.b.b	ENSGT00940000158365.f.a.a	ENSGT00940000155497.a.b.b #20	ENSGT00940000153840.a.b.i #22	ENSGT00940000165277.a.b	ENSGT00440000039203.i.e #24	ENSGT00940000167326.d.b	ENSGT00940000167326.d.a	ENSGT00390000000022.b.a.b.a #31	ENSGT00940000154892.n.d #29	ENSGT00390000018518.nb.a #28	ENSGT00940000156578.a.b.b #26	ENSGT00390000018542.a.a.b #25	ENSGT00940000153137.b.f	ENSGT00940000161934.b	ENSGT00390000018509.b.a	ENSGT00940000158369.c	ENSGT00940000160068.a.b.b.b	ENSGT00390000013698.b
Golden-line barbel	MODERN SPECIES	489	calcoco2 (ENSSGRG00000037285)	stx4 (ENSSGRG00000037266)	ENSSGRG00000037265	snx11 (ENSSGRG00000037264)	ENSSGRG00000037263	SLC16A6 (ENSSGRG00000037262)	gna13a (ENSSGRG00000037261)	rgs9b (ENSSGRG00000037260)	mrtfab (ENSSGRG00000037258) ##13	ENSSGRG00000037257	desi1b (ENSSGRG00000037256) #33	xrcc6 (ENSSGRG00000037163) #34	josd1 (ENSSGRG00000037162)	ENSSGRG00000037161	EP300 (ENSSGRG00000037160) #20	l3mbtl2 (ENSSGRG00000037078) #22	rangap1b (ENSSGRG00000037033) #24	ENSSGRG00000036992	csdc2a (ENSSGRG00000036991) #31	aco2 (ENSSGRG00000036978) #29	phf5a (ENSSGRG00000036961) #28	tefa (ENSSGRG00000036959) #26	ENSSGRG00000036955 #25	cby1 (ENSSGRG00000036925)	pdap1a (ENSSGRG00000036923)	ENSSGRG00000036905	ENSSGRG00000036904	ENSSGRG00000036901	ENSSGRG00000036900 #10	tmem184ba (ENSSGRG00000036144)	maff (ENSSGRG00000036133)
Common carp reference	MODERN SPECIES	44	calcoco2 (ENSCCRG00000028055)	stx4 (ENSCCRG00000035606)	ENSCCRG00000062006	snx11 (ENSCCRG00000061393)	ENSCCRG00000005511	ENSCCRG00000080966	ENSCCRG00000060983	gna13a (ENSCCRG00000080916)	rgs9b (ENSCCRG00000005354)	mrtfab (ENSCCRG00000053748) ##13	ENSCCRG00000005336	desi1b (ENSCCRG00000069148) #33	xrcc6 (ENSCCRG00000004076) #34	ENSCCRG00000066110	ENSCCRG00000003483 #20	l3mbtl2 (ENSCCRG00000003980) #22	chadlb (ENSCCRG00000069500)	rangap1b (ENSCCRG00000062787) #24	ENSCCRG00000075478	ENSCCRG00000053343	csdc2a (ENSCCRG00000069621) #31	aco2 (ENSCCRG00000026241) #29	phf5a (ENSCCRG00000028979) #28	tefa (ENSCCRG00000047755) #26	ENSCCRG00000047746 #25	cby1 (ENSCCRG00000047735)	slc16a8 (ENSCCRG00000047728)	pdap1a (ENSCCRG00000041388)	ENSCCRG00000046385	ENSCCRG00000017023	ENSCCRG00000017024
Cyprininae	ANCESTRAL SPECIES	36											ENSGT00730000111100.a.b.d #33	ENSGT00940000153239.B.h #34	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a #20	ENSGT00940000153840.a.b.j #22	ENSGT00940000165277.a	ENSGT00440000039203.i.f #24	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #31	ENSGT00940000154892.n.c #29	ENSGT00390000018518.nb.b #28	ENSGT00940000156578.a.b.a #26	ENSGT00390000018542.a.a.a #25	ENSGT00940000153137.b	ENSGT00940000161934.b	ENSGT00390000018509.b.a	ENSGT00940000158369.c	ENSGT00940000160068.a.b.b.b
Goldfish	MODERN SPECIES	3	PGS1 (ENSCARG00000003207)	cyth1b (ENSCARG00000003240)	HTR7 (ENSCARG00000003268)	ENSCARG00000003277	rpp30 (ENSCARG00000003300)	ankrd1b (ENSCARG00000003339)	pcgf5b (ENSCARG00000003346)	HECTD2 (ENSCARG00000003356)	ppp1r3cb (ENSCARG00000003367)	ENSCARG00000003376	desi1b (ENSCARG00000003378) #33	xrcc6 (ENSCARG00000003391) #34	josd1 (ENSCARG00000003441)	ENSCARG00000003445	EP300 (ENSCARG00000003476) #20	l3mbtl2 (ENSCARG00000003695) #22	chadlb (ENSCARG00000004193)	rangap1b (ENSCARG00000004218) #24	ENSCARG00000004343	ENSCARG00000004424	GUCY2C (ENSCARG00000004615)	csdc2a (ENSCARG00000006872) #31	aco2 (ENSCARG00000006902) #29	phf5a (ENSCARG00000007284) #28	tefa (ENSCARG00000007309) #26	ENSCARG00000007330 #25	cby1 (ENSCARG00000007430)	slc16a8 (ENSCARG00000007446)	ENSCARG00000007477 #10	ENSCARG00000007538	ENSCARG00000007592
Cyprininae_a	ANCESTRAL SPECIES	8	ENSGT00940000166841.b	ENSGT00940000160113.g	ENSGT00940000159093.e	ENSGT00940000155575.i.a.f	ENSGT00530000063996.a.b	ENSGT00530000063996.a.a.a	ENSGT00940000157054.u.a.b	ENSGT00940000156505.s.c	ENSGT00950000182979.a.a.a.b.b ##13	ENSGT00940000163663.A.b.b	ENSGT00730000111100.a.b.d #33	ENSGT00940000153239.B.h #34	ENSGT00390000009228.b.a	ENSGT00940000158365.f.a.b	ENSGT00940000155497.a.b.a #20	ENSGT00940000153840.a.b.j #22	ENSGT00940000165277.a.a	ENSGT00440000039203.i.f #24	ENSGT00530000063509.A.h	ENSGT00940000167326.c	ENSGT00940000155955.C.i.b	ENSGT00390000000022.b.a.b.b #31	ENSGT00940000154892.n.c #29	ENSGT00390000018518.nb.b #28	ENSGT00940000156578.a.b.a #26	ENSGT00390000018542.a.a.a #25	ENSGT00940000153137.b.e	ENSGT00940000161934.a	ENSGT00390000018509.b.b	ENSGT00940000158369.d	ENSGT00940000160068.a.b.b.a.a
Common carp reference	MODERN SPECIES	25	calcoco2 (ENSCCRG00000035600)	stx4 (ENSCCRG00000028059)	ENSCCRG00000028063	snx11 (ENSCCRG00000058183)	arsg (ENSCCRG00000035639)	ENSCCRG00000035666	gna13a (ENSCCRG00000055461)	rgs9b (ENSCCRG00000035685)	mrtfab (ENSCCRG00000054456) ##13	ENSCCRG00000005356	ENSCCRG00000059677	desi1b (ENSCCRG00000071135) #33	xrcc6 (ENSCCRG00000074154) #34	ENSCCRG00000068559	ENSCCRG00000057202 #20	l3mbtl2 (ENSCCRG00000035778) #22	chadlb (ENSCCRG00000035780)	rangap1b (ENSCCRG00000035782) #24	ENSCCRG00000035794	ENSCCRG00000059199	ENSCCRG00000035904	csdc2a (ENSCCRG00000026211) #31	aco2 (ENSCCRG00000029008) #29	phf5a (ENSCCRG00000054725) #28	tefa (ENSCCRG00000029207) #26	ENSCCRG00000029231 #25	cby1 (ENSCCRG00000029247)	slc16a8 (ENSCCRG00000029249)	pdap1a (ENSCCRG00000029254)	ENSCCRG00000029256	ENSCCRG00000069767
Golden-line barbel	MODERN SPECIES	56	stx4 (ENSSGRG00000051824)	ENSSGRG00000051825	snx11 (ENSSGRG00000051826)	ENSSGRG00000051827	SLC16A6 (ENSSGRG00000051828)	AMZ2 (ENSSGRG00000051829)	gna13a (ENSSGRG00000051830)	rgs9b (ENSSGRG00000051837)	mrtfab (ENSSGRG00000052071) ##13	ENSSGRG00000052073	desi1b (ENSSGRG00000052074) #33	xrcc6 (ENSSGRG00000052075) #34	josd1 (ENSSGRG00000052117)	ENSSGRG00000052118	EP300 (ENSSGRG00000052125) #20	l3mbtl2 (ENSSGRG00000052168) #22	chadlb (ENSSGRG00000052269)	ENSSGRG00000052270	rangap1b (ENSSGRG00000052271) #24	ENSSGRG00000052272	GUCY2C (ENSSGRG00000052280)	csdc2a (ENSSGRG00000052301) #31	aco2 (ENSSGRG00000052322) #29	phf5a (ENSSGRG00000052726) #28	phf5a (ENSSGRG00000052728) #28	tefa (ENSSGRG00000052733) #26	ENSSGRG00000052734 #25	cby1 (ENSSGRG00000000120)	slc16a8 (ENSSGRG00000000162)	pdap1a (ENSSGRG00000000186)	ENSSGRG00000000218
Zebrafish	MODERN SPECIES	3	mlst8 (ENSDARG00000003167)	bricd5 (ENSDARG00000056247)	ENSDARG00000114422	pgp (ENSDARG00000029695)	zdhhc4 (ENSDARG00000045159)	grid2ipb (ENSDARG00000095603)	ENSDARG00000045157	rgs9b (ENSDARG00000045156)	mrtfab (ENSDARG00000076229) ##13	ENSDARG00000088204	desi1b (ENSDARG00000089529) #33	xrcc6 (ENSDARG00000071551) #34	josd1 (ENSDARG00000071548)	CBX7 (ENSDARG00000087181)	EP300 (ENSDARG00000100666) #20	l3mbtl2 (ENSDARG00000056079) #22	chadlb (ENSDARG00000075903)	rangap1b (ENSDARG00000056059) #24	PLBD1 (ENSDARG00000076015)	ENSDARG00000056050	ENSDARG00000056045	csdc2a (ENSDARG00000041323) #31	aco2 (ENSDARG00000007294) #29	phf5a (ENSDARG00000045155) #28	tefa (ENSDARG00000039117) #26	ZC3H7B (ENSDARG00000055930) #25	cby1 (ENSDARG00000077409)	slc16a8 (ENSDARG00000045153)	pdap1a (ENSDARG00000092546)	ENSDARG00000078119	ENSDARG00000079549
Spotted gar	MODERN SPECIES	650	ncf4 (ENSLOCG00000011446)	ENSLOCG00000011456	baiap2l2b (ENSLOCG00000011463)	pla2g6 (ENSLOCG00000011469)	ENSLOCG00000017847	ENSLOCG00000011475	ENSLOCG00000011482	slc25a17 (ENSLOCG00000011492) #15	ENSLOCG00000011497 ##13	ENSLOCG00000011515	desi1a (ENSLOCG00000011526) #33	xrcc6 (ENSLOCG00000011533) #34	josd1 (ENSLOCG00000011543)	ENSLOCG00000011547 #20	xpnpep3 (ENSLOCG00000011565) #18	ENSLOCG00000011574 #22	rangap1a (ENSLOCG00000011582) #24	zc3h7ba (ENSLOCG00000011588) #25	tefa (ENSLOCG00000011595) #26	TOB2 (ENSLOCG00000011604) #27	aco2 (ENSLOCG00000011607) #29	polr3h (ENSLOCG00000011621) #30	csdc2a (ENSLOCG00000011627) #31	ENSLOCG00000011637 #32	GUCY2C (ENSLOCG00000011647)	slc16a8 (ENSLOCG00000011658)	ENSLOCG00000011665	ENSLOCG00000017848	ENSLOCG00000011670	ENSLOCG00000011678	ENSLOCG00000011684
Reedfish	MODERN SPECIES	3	ENSECRG00000017420	ENSECRG00000017403	ENSECRG00000017383	ENSECRG00000017346	ENSECRG00000016986	ENSECRG00000016866	ENSECRG00000016848	ENSECRG00000016825	ENSECRG00000016802	ENSECRG00000016783	EP300 (ENSECRG00000016746) #20	xpnpep3 (ENSECRG00000016709) #18	st13 (ENSECRG00000016594) #16	rbx1 (ENSECRG00000016541) #19	ENSECRG00000016483	l3mbtl2 (ENSECRG00000016435) #22	CHADL (ENSECRG00000016311) #23	rangap1a (ENSECRG00000016243) #24	zc3h7ba (ENSECRG00000016172) #25	tefa (ENSECRG00000016143) #26	TOB2 (ENSECRG00000016128) #27	phf5a (ENSECRG00000016102) #28	aco2 (ENSECRG00000016067) #29	polr3h (ENSECRG00000016042) #30	csdc2a (ENSECRG00000016018) #31	PMM1 (ENSECRG00000015991) #32	ENSECRG00000015952	ENSECRG00000015897	ENSECRG00000015860	ENSECRG00000015841	ENSECRG00000015824
Elephant shark	MODERN SPECIES	1746	ENSCMIG00000005165 ##13	desi1b (ENSCMIG00000005168) #33	ENSCMIG00000005174 #32	csdc2a (ENSCMIG00000005177) #31	polr3h (ENSCMIG00000005180) #30	ENSCMIG00000005181	ENSCMIG00000005184	aco2 (ENSCMIG00000005265) #29	phf5a (ENSCMIG00000005498) #28	TOB2 (ENSCMIG00000005503) #27	tefa (ENSCMIG00000005514) #26	ZC3H7B (ENSCMIG00000005534) #25	rangap1a (ENSCMIG00000005602) #24	ENSCMIG00000005635	ENSCMIG00000005640	L3MBTL2 (ENSCMIG00000005644) #22	EP300 (ENSCMIG00000005795) #20	rbx1 (ENSCMIG00000006002) #19	xpnpep3 (ENSCMIG00000006008) #18	st13 (ENSCMIG00000006024) #16	ENSCMIG00000006038	ENSCMIG00000006043	ENSCMIG00000006049	ENSCMIG00000006051 #37	ENSCMIG00000006056 #37	ENSCMIG00000006062 #37	ENSCMIG00000006073	ENSCMIG00000006085	gcat (ENSCMIG00000006093)