Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 75 ENSGT00390000001787 ENSGT00950000183091.B.b ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00530000063877.b ENSGT00940000159377 ENSGT00390000009988 Euteleostomi ANCESTRAL SPECIES 54 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00530000063877.b ENSGT00940000159377 ENSGT00390000009988 Sarcopterygii ANCESTRAL SPECIES 42 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00530000063877.b ENSGT00940000159377 ENSGT00390000009988 ENSGT00390000013522 Tetrapoda ANCESTRAL SPECIES 1 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00940000153725.a.b.b ENSGT00730000111020.b.a #13 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Amniota ANCESTRAL SPECIES 3 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Mammalia ANCESTRAL SPECIES 3 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Theria ANCESTRAL SPECIES 7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Eutheria ANCESTRAL SPECIES 30 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Pecora ANCESTRAL SPECIES 32 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Percora_a ANCESTRAL SPECIES 12 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Bovidae ANCESTRAL SPECIES 13 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Bovinae ANCESTRAL SPECIES 9 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A.c.a.a.a.a #36 Bos ANCESTRAL SPECIES 37 ENSGT00390000009122.q #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a.gb.b #32 ENSGT00940000155952 #33 ENSGT00950000182818.A.c.a.b #37 ENSGT00940000163720 Bos_a ANCESTRAL SPECIES 49 ENSGT00390000009122.q #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a.gb.b #32 ENSGT00940000155952 #33 ENSGT01100000263481.n.a.b.a.a.a.a.a.b.a.a.b.a.a.a.b.a.a #34 ENSGT00940000161470 #35 ENSGT00950000182818.A.c.a.a.a.a #36 ENSGT00950000182818.A.c.a.b #37 Domestic yak MODERN SPECIES 16 NOL7 (ENSBGRG00000011846) #10 RANBP9 (ENSBGRG00000011703) #11 MCUR1 (ENSBGRG00000011530) #12 RNF182 (ENSBGRG00000011487) #13 ENSBGRG00000011379 #14 JARID2 (ENSBGRG00000010927) #15 DTNBP1 (ENSBGRG00000010332) #16 ENSBGRG00000010290 ENSBGRG00000010279 MYLIP (ENSBGRG00000010121) #17 GMPR (ENSBGRG00000010074) #18 ATXN1 (ENSBGRG00000010014) #19 STMND1 (ENSBGRG00000009810) #20 RBM24 (ENSBGRG00000009712) #21 ENSBGRG00000009692 CAP2 (ENSBGRG00000009414) #22 FAM8A1 (ENSBGRG00000009373) #23 NUP153 (ENSBGRG00000009018) #24 KIF13A (ENSBGRG00000008452) #25 NHLRC1 (ENSBGRG00000008383) ENSBGRG00000008333 KDM1B (ENSBGRG00000008215) #27 ENSBGRG00000008032 #26 DEK (ENSBGRG00000007821) #28 RNF144B (ENSBGRG00000007714) #29 ID4 (ENSBGRG00000007672) #30 MBOAT1 (ENSBGRG00000007151) #31 E2F3 (ENSBGRG00000006987) #32 ENSBGRG00000006938 ENSBGRG00000025936 ##34 CDKAL1 (ENSBGRG00000025903) #33 Wild yak MODERN SPECIES 978 MYLIP (ENSBMUG00000011854) #17 GMPR (ENSBMUG00000011867) #18 ATXN1 (ENSBMUG00000011885) #19 STMND1 (ENSBMUG00000011922) #20 RBM24 (ENSBMUG00000011939) #21 CAP2 (ENSBMUG00000012025) #22 FAM8A1 (ENSBMUG00000012105) #23 NUP153 (ENSBMUG00000012121) #24 KIF13A (ENSBMUG00000012374) #25 TPMT (ENSBMUG00000012678) #26 KDM1B (ENSBMUG00000012743) #27 DEK (ENSBMUG00000012799) #28 RNF144B (ENSBMUG00000012826) #29 MBOAT1 (ENSBMUG00000012858) #31 E2F3 (ENSBMUG00000012885) ##32 ENSBMUG00000012913 #33 Bos_b ANCESTRAL SPECIES 8 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00960000191187 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a.gb.b #32 ENSGT00940000155115.a.a.gb.a ##32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Cow MODERN SPECIES 15 GFOD1 (ENSBTAG00000049619) #8 SIRT5 (ENSBTAG00000014904) #9 NOL7 (ENSBTAG00000021554) #10 RANBP9 (ENSBTAG00000021556) #11 MCUR1 (ENSBTAG00000001475) #12 RNF182 (ENSBTAG00000054058) #13 CD83 (ENSBTAG00000050334) #14 JARID2 (ENSBTAG00000012938) #15 DTNBP1 (ENSBTAG00000012939) #16 MYLIP (ENSBTAG00000004115) #17 GMPR (ENSBTAG00000015743) #18 ENSBTAG00000019672 ATXN1 (ENSBTAG00000019675) #19 STMND1 (ENSBTAG00000020559) #20 RBM24 (ENSBTAG00000015396) #21 CAP2 (ENSBTAG00000016924) #22 FAM8A1 (ENSBTAG00000017118) #23 ENSBTAG00000050753 ##34 NUP153 (ENSBTAG00000017128) #24 KIF13A (ENSBTAG00000019217) #25 NHLRC1 (ENSBTAG00000012087) ENSBTAG00000048340 TPMT (ENSBTAG00000019300) #26 KDM1B (ENSBTAG00000014608) #27 DEK (ENSBTAG00000012865) #28 RNF144B (ENSBTAG00000009055) #29 ID4 (ENSBTAG00000052562) #30 MBOAT1 (ENSBTAG00000016519) #31 E2F3 (ENSBTAG00000021045) #32 ENSBTAG00000051493 CDKAL1 (ENSBTAG00000025589) #33 Hybrid Bos Indicus MODERN SPECIES 15 RANBP9 (ENSBIXG00005007792) #11 MCUR1 (ENSBIXG00005004903) #12 RNF182 (ENSBIXG00005004907) #13 CD83 (ENSBIXG00005004916) #14 ENSBIXG00005028603 JARID2 (ENSBIXG00005005348) #15 DTNBP1 (ENSBIXG00005028868) #16 ENSBIXG00005028902 MYLIP (ENSBIXG00005005057) #17 GMPR (ENSBIXG00005028941) #18 ENSBIXG00005002176 ATXN1 (ENSBIXG00005002150) #19 ENSBIXG00005002131 STMND1 (ENSBIXG00005028968) #20 RBM24 (ENSBIXG00005028998) #21 CAP2 (ENSBIXG00005001999) #22 FAM8A1 (ENSBIXG00005001959) #23 NUP153 (ENSBIXG00005005155) #24 ENSBIXG00005009152 ##34 KIF13A (ENSBIXG00005009343) #25 NHLRC1 (ENSBIXG00005009409) ENSBIXG00005009424 TPMT (ENSBIXG00005006310) #26 KDM1B (ENSBIXG00005005465) #27 DEK (ENSBIXG00005009572) #28 ENSBIXG00005009597 ENSBIXG00005009607 RNF144B (ENSBIXG00005009620) #29 ENSBIXG00005009642 ID4 (ENSBIXG00005009689) #30 MBOAT1 (ENSBIXG00005009813) #31 American bison MODERN SPECIES 3190 TBC1D7 (ENSBBBG00000012473) #7 ENSBBBG00000012423 #8 SIRT5 (ENSBBBG00000002365) #9 NOL7 (ENSBBBG00000012382) #10 RANBP9 (ENSBBBG00000012378) #11 MCUR1 (ENSBBBG00000007165) #12 RNF182 (ENSBBBG00000002342) #13 CD83 (ENSBBBG00000002341) #14 JARID2 (ENSBBBG00000002338) #15 ENSBBBG00000002334 #16 MYLIP (ENSBBBG00000012335) #17 GMPR (ENSBBBG00000012331) #18 ENSBBBG00000002333 STMND1 (ENSBBBG00000012316) #20 ENSBBBG00000012312 #21 CAP2 (ENSBBBG00000001924) #22 FAM8A1 (ENSBBBG00000012208) #23 NUP153 (ENSBBBG00000002294) #24 KIF13A (ENSBBBG00000012080) #25 NHLRC1 (ENSBBBG00000011710) ENSBBBG00000011705 TPMT (ENSBBBG00000002159) #26 KDM1B (ENSBBBG00000011691) #27 DEK (ENSBBBG00000011643) #28 RNF144B (ENSBBBG00000011617) #29 MBOAT1 (ENSBBBG00000011603) #31 E2F3 (ENSBBBG00000002128) #32 CDKAL1 (ENSBBBG00000011576) #33 Caprinae ANCESTRAL SPECIES 41 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Goat MODERN SPECIES 15 ENSCHIG00000022682 SIRT5 (ENSCHIG00000017168) #9 NOL7 (ENSCHIG00000020887) #10 RANBP9 (ENSCHIG00000021656) #11 MCUR1 (ENSCHIG00000012797) #12 RNF182 (ENSCHIG00000004260) #13 CD83 (ENSCHIG00000017611) #14 ENSCHIG00000008871 JARID2 (ENSCHIG00000007119) #15 DTNBP1 (ENSCHIG00000023054) #16 MYLIP (ENSCHIG00000025481) #17 GMPR (ENSCHIG00000024167) #18 ATXN1 (ENSCHIG00000018697) #19 STMND1 (ENSCHIG00000024101) #20 RBM24 (ENSCHIG00000013536) #21 CAP2 (ENSCHIG00000026734) #22 ENSCHIG00000013441 FAM8A1 (ENSCHIG00000010066) #23 NUP153 (ENSCHIG00000023764) #24 KIF13A (ENSCHIG00000008522) #25 NHLRC1 (ENSCHIG00000022100) ENSCHIG00000018384 TPMT (ENSCHIG00000005780) #26 KDM1B (ENSCHIG00000011641) #27 DEK (ENSCHIG00000026737) #28 RNF144B (ENSCHIG00000014974) #29 ID4 (ENSCHIG00000020094) #30 MBOAT1 (ENSCHIG00000009573) #31 ENSCHIG00000010662 #32 ENSCHIG00000022931 CDKAL1 (ENSCHIG00000022647) #33 Yarkand deer MODERN SPECIES 30 GFOD1 (ENSCHYG00000023570) #8 SIRT5 (ENSCHYG00000023352) #9 NOL7 (ENSCHYG00000023306) #10 RANBP9 (ENSCHYG00000023234) #11 MCUR1 (ENSCHYG00000023168) #12 RNF182 (ENSCHYG00000023153) #13 CD83 (ENSCHYG00000023103) #14 JARID2 (ENSCHYG00000022930) #15 DTNBP1 (ENSCHYG00000022572) #16 MYLIP (ENSCHYG00000022490) #17 ENSCHYG00000022472 GMPR (ENSCHYG00000022412) #18 ATXN1 (ENSCHYG00000022390) #19 STMND1 (ENSCHYG00000022206) #20 RBM24 (ENSCHYG00000022130) #21 CAP2 (ENSCHYG00000021791) #22 FAM8A1 (ENSCHYG00000021702) #23 NUP153 (ENSCHYG00000021077) #24 KIF13A (ENSCHYG00000016260) #25 NHLRC1 (ENSCHYG00000015991) ENSCHYG00000015944 TPMT (ENSCHYG00000015890) #26 KDM1B (ENSCHYG00000015627) #27 ENSCHYG00000015544 #28 RNF144B (ENSCHYG00000015354) #29 ID4 (ENSCHYG00000015137) #30 MBOAT1 (ENSCHYG00000014895) #31 ENSCHYG00000014872 ##34 E2F3 (ENSCHYG00000014717) #32 CDKAL1 (ENSCHYG00000014251) #33 SOX4 (ENSCHYG00000014108) #35 Cetacea ANCESTRAL SPECIES 7 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302.a #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302.a #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302.a #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302.a #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00390000005811.f.a.b ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Monodontidae ANCESTRAL SPECIES 4 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302.a #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00390000005811.f.a.b ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Narwhal MODERN SPECIES 310 NOL7 (ENSMMNG00015012130) #10 RANBP9 (ENSMMNG00015012193) #11 MCUR1 (ENSMMNG00015012302) #12 RNF182 (ENSMMNG00015012336) #13 CD83 (ENSMMNG00015012348) #14 ENSMMNG00015012368 ENSMMNG00015012390 ENSMMNG00015012417 JARID2 (ENSMMNG00015012468) #15 ENSMMNG00015012556 #16 MYLIP (ENSMMNG00015012592) #17 GMPR (ENSMMNG00015012605) #18 ATXN1 (ENSMMNG00015012616) #19 STMND1 (ENSMMNG00015012629) #20 RBM24 (ENSMMNG00015012652) #21 CAP2 (ENSMMNG00015012703) #22 FAM8A1 (ENSMMNG00015012765) #23 NUP153 (ENSMMNG00015012788) #24 KIF13A (ENSMMNG00015012910) #25 NHLRC1 (ENSMMNG00015013102) ENSMMNG00015013110 TPMT (ENSMMNG00015013119) #26 KDM1B (ENSMMNG00015013151) #27 DEK (ENSMMNG00015013198) #28 ENSMMNG00015013235 RNF144B (ENSMMNG00015013247) #29 ENSMMNG00015013266 ID4 (ENSMMNG00015013275) #30 MBOAT1 (ENSMMNG00015013281) #31 E2F3 (ENSMMNG00015013298) #32 CDKAL1 (ENSMMNG00015013320) #33 Beluga whale MODERN SPECIES 10 SIRT5 (ENSDLEG00000002354) #9 NOL7 (ENSDLEG00000002363) #10 RANBP9 (ENSDLEG00000002373) #11 MCUR1 (ENSDLEG00000002385) #12 RNF182 (ENSDLEG00000002406) #13 CD83 (ENSDLEG00000002410) #14 ENSDLEG00000002423 ENSDLEG00000002437 JARID2 (ENSDLEG00000002457) #15 ENSDLEG00000002532 #16 MYLIP (ENSDLEG00000002546) #17 GMPR (ENSDLEG00000000133) #18 ATXN1 (ENSDLEG00000000174) #19 STMND1 (ENSDLEG00000000219) #20 RBM24 (ENSDLEG00000000260) #21 CAP2 (ENSDLEG00000000378) #22 FAM8A1 (ENSDLEG00000000428) #23 NUP153 (ENSDLEG00000000453) #24 KIF13A (ENSDLEG00000000566) #25 NHLRC1 (ENSDLEG00000000758) ENSDLEG00000000766 TPMT (ENSDLEG00000000780) #26 KDM1B (ENSDLEG00000000817) #27 DEK (ENSDLEG00000000881) #28 ENSDLEG00000000903 RNF144B (ENSDLEG00000000913) #29 ID4 (ENSDLEG00000000943) #30 MBOAT1 (ENSDLEG00000000956) #31 E2F3 (ENSDLEG00000000977) #32 CDKAL1 (ENSDLEG00000001022) #33 SOX4 (ENSDLEG00000001098) #35 Vaquita MODERN SPECIES 2 SIRT5 (ENSPSNG00000009251) #9 NOL7 (ENSPSNG00000009156) #10 RANBP9 (ENSPSNG00000009093) #11 MCUR1 (ENSPSNG00000009054) #12 RNF182 (ENSPSNG00000009040) #13 CD83 (ENSPSNG00000009015) #14 ENSPSNG00000008971 ENSPSNG00000008950 JARID2 (ENSPSNG00000008845) #15 DTNBP1 (ENSPSNG00000008743) #16 MYLIP (ENSPSNG00000008687) #17 GMPR (ENSPSNG00000008612) #18 ATXN1 (ENSPSNG00000008575) #19 ENSPSNG00000008507 RBM24 (ENSPSNG00000008429) #21 CAP2 (ENSPSNG00000008250) #22 FAM8A1 (ENSPSNG00000008144) #23 NUP153 (ENSPSNG00000007852) #24 KIF13A (ENSPSNG00000007488) #25 NHLRC1 (ENSPSNG00000007359) ENSPSNG00000007328 TPMT (ENSPSNG00000007284) #26 KDM1B (ENSPSNG00000007205) #27 DEK (ENSPSNG00000008720) #28 ENSPSNG00000008654 RNF144B (ENSPSNG00000008619) #29 ID4 (ENSPSNG00000008591) #30 MBOAT1 (ENSPSNG00000008528) #31 E2F3 (ENSPSNG00000008443) #32 CDKAL1 (ENSPSNG00000008396) #33 PRL (ENSPSNG00000008284) #37 Dolphin MODERN SPECIES 4972 RBM24 (ENSTTRG00000000393) #21 CAP2 (ENSTTRG00000000394) #22 Sperm whale MODERN SPECIES 9 RANBP9 (ENSPCTG00005004958) #11 MCUR1 (ENSPCTG00005004921) #12 RNF182 (ENSPCTG00005004907) #13 ENSPCTG00005004890 #14 ENSPCTG00005004870 ENSPCTG00005004851 ENSPCTG00005004837 JARID2 (ENSPCTG00005004540) #15 DTNBP1 (ENSPCTG00005004422) #16 MYLIP (ENSPCTG00005004367) #17 ENSPCTG00005004325 ATXN1 (ENSPCTG00005020410) #19 ENSPCTG00005020387 STMND1 (ENSPCTG00005020362) #20 RBM24 (ENSPCTG00005020303) #21 CAP2 (ENSPCTG00005020142) #22 ENSPCTG00005020088 FAM8A1 (ENSPCTG00005020033) #23 ENSPCTG00005019568 #24 KIF13A (ENSPCTG00005017768) #25 NHLRC1 (ENSPCTG00005017672) ENSPCTG00005017645 TPMT (ENSPCTG00005017599) #26 KDM1B (ENSPCTG00005017513) #27 DEK (ENSPCTG00005017379) #28 ENSPCTG00005017325 RNF144B (ENSPCTG00005017272) #29 ENSPCTG00005017257 ENSPCTG00005017215 ID4 (ENSPCTG00005017178) #30 MBOAT1 (ENSPCTG00005017086) #31 Blue whale MODERN SPECIES 2 RANBP9 (ENSBMSG00010008301) #11 MCUR1 (ENSBMSG00010008331) #12 RNF182 (ENSBMSG00010008347) #13 ENSBMSG00010008353 #14 ENSBMSG00010008364 ENSBMSG00010008373 JARID2 (ENSBMSG00010008385) #15 DTNBP1 (ENSBMSG00010008422) #16 ENSBMSG00010008488 MYLIP (ENSBMSG00010008495) #17 GMPR (ENSBMSG00010008446) #18 ATXN1 (ENSBMSG00010008456) #19 STMND1 (ENSBMSG00010008487) #20 ENSBMSG00010008501 RBM24 (ENSBMSG00010008527) #21 CAP2 (ENSBMSG00010008605) #22 FAM8A1 (ENSBMSG00010008915) #23 NUP153 (ENSBMSG00010008959) #24 KIF13A (ENSBMSG00010009044) #25 NHLRC1 (ENSBMSG00010009156) ENSBMSG00010009160 TPMT (ENSBMSG00010009170) #26 KDM1B (ENSBMSG00010009201) #27 DEK (ENSBMSG00010009290) #28 RNF144B (ENSBMSG00010009325) #29 ENSBMSG00010009341 ENSBMSG00010009344 ID4 (ENSBMSG00010009351) #30 MBOAT1 (ENSBMSG00010009363) #31 E2F3 (ENSBMSG00010009379) #32 CDKAL1 (ENSBMSG00010009394) #33 Camelidae ANCESTRAL SPECIES 54 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000163720 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Suina ANCESTRAL SPECIES 8 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.m #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Pig MODERN SPECIES 15 NOL7 (ENSSSCG00000040816) #10 RANBP9 (ENSSSCG00000001056) #11 MCUR1 (ENSSSCG00000054763) #12 RNF182 (ENSSSCG00000038290) #13 CD83 (ENSSSCG00000021576) #14 ENSSSCG00000046603 ENSSSCG00000001060 JARID2 (ENSSSCG00000001061) #15 DTNBP1 (ENSSSCG00000001062) #16 MYLIP (ENSSSCG00000001063) #17 GMPR (ENSSSCG00000001064) #18 ATXN1 (ENSSSCG00000001065) #19 ENSSSCG00000050012 STMND1 (ENSSSCG00000001067) #20 ENSSSCG00000038455 #21 CAP2 (ENSSSCG00000001068) #22 FAM8A1 (ENSSSCG00000001070) #23 NUP153 (ENSSSCG00000026034) #24 KIF13A (ENSSSCG00000020858) #25 ENSSSCG00000036241 ENSSSCG00000041556 ENSSSCG00000045446 TPMT (ENSSSCG00000001073) #26 KDM1B (ENSSSCG00000001074) #27 ENSSSCG00000001075 #28 RNF144B (ENSSSCG00000001076) #29 ID4 (ENSSSCG00000024312) #30 MBOAT1 (ENSSSCG00000001078) #31 E2F3 (ENSSSCG00000040178) #32 CDKAL1 (ENSSSCG00000001080) #33 ENSSSCG00000055482 Chacoan peccary MODERN SPECIES 782 GFOD1 (ENSCWAG00000017054) #8 ENSCWAG00000017034 SIRT5 (ENSCWAG00000016966) #9 NOL7 (ENSCWAG00000016945) #10 RANBP9 (ENSCWAG00000016857) #11 MCUR1 (ENSCWAG00000016797) #12 RNF182 (ENSCWAG00000016785) #13 CD83 (ENSCWAG00000016722) #14 JARID2 (ENSCWAG00000016592) #15 DTNBP1 (ENSCWAG00000016331) #16 MYLIP (ENSCWAG00000016288) #17 GMPR (ENSCWAG00000016256) #18 ATXN1 (ENSCWAG00000016235) #19 STMND1 (ENSCWAG00000016182) #20 RBM24 (ENSCWAG00000016112) #21 CAP2 (ENSCWAG00000014538) #22 FAM8A1 (ENSCWAG00000014457) #23 NUP153 (ENSCWAG00000014313) #24 ENSCWAG00000014262 KIF13A (ENSCWAG00000013855) #25 NHLRC1 (ENSCWAG00000013805) ENSCWAG00000013785 TPMT (ENSCWAG00000013753) #26 KDM1B (ENSCWAG00000013571) #27 DEK (ENSCWAG00000013444) #28 RNF144B (ENSCWAG00000013392) #29 ID4 (ENSCWAG00000013357) #30 MBOAT1 (ENSCWAG00000013325) #31 E2F3 (ENSCWAG00000013183) #32 CDKAL1 (ENSCWAG00000013065) #33 SOX4 (ENSCWAG00000013046) #35 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Caniformia_b ANCESTRAL SPECIES 31 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000183087.A.a.a.a.a ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Ursidae ANCESTRAL SPECIES 39 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Ursus ANCESTRAL SPECIES 34 ENSGT00940000155842 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957.k #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 Polar bear MODERN SPECIES 181 PHACTR1 (ENSUMAG00000017951) TBC1D7 (ENSUMAG00000017937) #7 ENSUMAG00000017927 #8 SIRT5 (ENSUMAG00000017905) #9 NOL7 (ENSUMAG00000017888) #10 RANBP9 (ENSUMAG00000017815) #11 ENSUMAG00000017751 #12 RNF182 (ENSUMAG00000017731) #13 CD83 (ENSUMAG00000017714) #14 JARID2 (ENSUMAG00000017681) #15 DTNBP1 (ENSUMAG00000017672) #16 MYLIP (ENSUMAG00000017652) #17 GMPR (ENSUMAG00000017644) #18 ENSUMAG00000017635 #19 STMND1 (ENSUMAG00000017629) #20 CAP2 (ENSUMAG00000017625) #22 ENSUMAG00000017623 #23 NUP153 (ENSUMAG00000017135) #24 KIF13A (ENSUMAG00000016617) #25 TPMT (ENSUMAG00000016539) #26 KDM1B (ENSUMAG00000016529) #27 DEK (ENSUMAG00000016517) #28 RNF144B (ENSUMAG00000016506) #29 American black bear MODERN SPECIES 2535 ENSUAMG00000015201 #22 Giant Panda MODERN SPECIES 15 GFOD1 (ENSAMEG00000000505) #8 SIRT5 (ENSAMEG00000000481) #9 NOL7 (ENSAMEG00000027173) #10 RANBP9 (ENSAMEG00000000415) #11 MCUR1 (ENSAMEG00000000395) #12 RNF182 (ENSAMEG00000020297) #13 ENSAMEG00000023997 #14 JARID2 (ENSAMEG00000000339) #15 DTNBP1 (ENSAMEG00000026241) #16 MYLIP (ENSAMEG00000004229) #17 GMPR (ENSAMEG00000004245) #18 ATXN1 (ENSAMEG00000027980) #19 ENSAMEG00000024783 STMND1 (ENSAMEG00000000709) #20 ENSAMEG00000025748 #21 CAP2 (ENSAMEG00000000711) #22 FAM8A1 (ENSAMEG00000029006) #23 NUP153 (ENSAMEG00000000721) #24 KIF13A (ENSAMEG00000000766) #25 NHLRC1 (ENSAMEG00000008350) ENSAMEG00000026088 TPMT (ENSAMEG00000008351) #26 KDM1B (ENSAMEG00000008386) #27 DEK (ENSAMEG00000008396) #28 RNF144B (ENSAMEG00000008424) #29 ENSAMEG00000025972 #30 MBOAT1 (ENSAMEG00000017870) #31 E2F3 (ENSAMEG00000025262) #32 CDKAL1 (ENSAMEG00000017897) #33 ENSAMEG00000029182 ENSAMEG00000011155 #35 American mink MODERN SPECIES 326 GMPR1 (ENSNVIG00000021557) #18 ATXN1 (ENSNVIG00000021486) #19 STMND1 (ENSNVIG00000021435) #20 RBM24 (ENSNVIG00000021376) #21 ENSNVIG00000021316 CAP2 (ENSNVIG00000020931) #22 FAM8A1 (ENSNVIG00000020808) #23 NUP153 (ENSNVIG00000020448) #24 KIF13A (ENSNVIG00000019856) #25 NHLRC1 (ENSNVIG00000019748) ENSNVIG00000019727 TPMT (ENSNVIG00000019650) #26 KDM1B (ENSNVIG00000019249) #27 DEK (ENSNVIG00000019093) #28 Ferret MODERN SPECIES 240 JARID2 (ENSMPUG00000005439) #15 ENSMPUG00000005433 DTNBP1 (ENSMPUG00000005421) #16 MYLIP (ENSMPUG00000005414) #17 GMPR (ENSMPUG00000005406) #18 ATXN1 (ENSMPUG00000005398) #19 ENSMPUG00000005384 ENSMPUG00000005373 STMND1 (ENSMPUG00000005365) #20 ENSMPUG00000005361 ENSMPUG00000019611 CAP2 (ENSMPUG00000005184) #22 ENSMPUG00000005182 FAM8A1 (ENSMPUG00000005173) #23 ENSMPUG00000005159 KIF13A (ENSMPUG00000005136) #25 NHLRC1 (ENSMPUG00000005133) ENSMPUG00000005124 #27 ENSMPUG00000005114 #27 DEK (ENSMPUG00000005031) #28 TPMT (ENSMPUG00000005026) #26 RNF144B (ENSMPUG00000005023) #29 ENSMPUG00000005017 ENSMPUG00000005008 ENSMPUG00000004976 MBOAT1 (ENSMPUG00000004966) #31 E2F3 (ENSMPUG00000004957) #32 Canidae ANCESTRAL SPECIES 48 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957.i #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000183087.A.a.a.a.a ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000156204.db.b ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Dog MODERN SPECIES 28 SIRT5 (ENSCAFG00845022235) #9 RANBP9 (ENSCAFG00845022601) #11 ENSCAFG00845022965 #12 ENSCAFG00845023078 RNF182 (ENSCAFG00845023112) #13 CD83 (ENSCAFG00845023170) #14 ASF1B (ENSCAFG00845023235) JARID2 (ENSCAFG00845023372) #15 DTNBP1 (ENSCAFG00845023988) #16 MYLIP (ENSCAFG00845024271) #17 GMPR (ENSCAFG00845024346) #18 ATXN1 (ENSCAFG00845024467) #19 ENSCAFG00845024528 ENSCAFG00845024720 #20 RBM24 (ENSCAFG00845024813) #21 CAP2 (ENSCAFG00845024988) #22 ENSCAFG00845025333 FAM8A1 (ENSCAFG00845025363) #23 NUP153 (ENSCAFG00845025432) #24 KIF13A (ENSCAFG00845026182) #25 KDM1B (ENSCAFG00845028324) #27 NHLRC1 (ENSCAFG00845028631) ENSCAFG00845028647 TPMT (ENSCAFG00845028681) #26 ENSCAFG00845028872 #28 RNF144B (ENSCAFG00845028994) #29 ENSCAFG00845029032 ID4 (ENSCAFG00845016386) #30 MBOAT1 (ENSCAFG00845016457) #31 E2F3 (ENSCAFG00845016633) #32 CDKAL1 (ENSCAFG00845016956) #33 Dingo MODERN SPECIES 411 NOL7 (ENSCAFG00020012980) #10 RANBP9 (ENSCAFG00020012897) #11 ENSCAFG00020012879 #12 ENSCAFG00020012875 RNF182 (ENSCAFG00020012872) #13 CD83 (ENSCAFG00020012868) #14 ENSCAFG00020012863 ENSCAFG00020012854 JARID2 (ENSCAFG00020012677) #15 DTNBP1 (ENSCAFG00020012656) #16 MYLIP (ENSCAFG00020012654) #17 GMPR (ENSCAFG00020012651) #18 ATXN1 (ENSCAFG00020012647) #19 STMND1 (ENSCAFG00020012642) #20 RBM24 (ENSCAFG00020012640) #21 CAP2 (ENSCAFG00020012409) #22 ENSCAFG00020012400 #23 NUP153 (ENSCAFG00020010901) #24 ENSCAFG00020010689 #25 ENSCAFG00020010528 #25 NHLRC1 (ENSCAFG00020010518) ENSCAFG00020010512 TPMT (ENSCAFG00020010506) #26 KDM1B (ENSCAFG00020010341) #27 ENSCAFG00020010323 #28 RNF144B (ENSCAFG00020010318) #29 ENSCAFG00020010317 ID4 (ENSCAFG00020010309) #30 MBOAT1 (ENSCAFG00020010297) #31 E2F3 (ENSCAFG00020010259) #32 CDKAL1 (ENSCAFG00020010256) #33 leopard MODERN SPECIES 80 TBC1D7 (ENSPPRG00000001025) #7 GFOD1 (ENSPPRG00000001406) #8 SIRT5 (ENSPPRG00000001863) #9 NOL7 (ENSPPRG00000002215) #10 RANBP9 (ENSPPRG00000002341) #11 MCUR1 (ENSPPRG00000002667) #12 RNF182 (ENSPPRG00000022028) #13 CD83 (ENSPPRG00000002872) #14 JARID2 (ENSPPRG00000003551) #15 DTNBP1 (ENSPPRG00000004103) #16 MYLIP (ENSPPRG00000004288) #17 GMPR (ENSPPRG00000004384) #18 ATXN1 (ENSPPRG00000004547) #19 STMND1 (ENSPPRG00000004658) #20 RBM24 (ENSPPRG00000005000) #21 CAP2 (ENSPPRG00000005654) #22 FAM8A1 (ENSPPRG00000005870) #23 NUP153 (ENSPPRG00000006160) #24 KIF13A (ENSPPRG00000008230) #25 NHLRC1 (ENSPPRG00000010753) ENSPPRG00000008466 TPMT (ENSPPRG00000008607) #26 KDM1B (ENSPPRG00000008701) #27 DEK (ENSPPRG00000008778) #28 RNF144B (ENSPPRG00000008812) #29 ID4 (ENSPPRG00000009089) #30 Tiger MODERN SPECIES 308 ENSPTIG00000020633 TBC1D7 (ENSPTIG00000020754) #7 GFOD1 (ENSPTIG00000021462) #8 SIRT5 (ENSPTIG00000002186) #9 NOL7 (ENSPTIG00000006154) #10 RANBP9 (ENSPTIG00000006754) #11 MCUR1 (ENSPTIG00000008035) #12 RNF182 (ENSPTIG00000003000) #13 CD83 (ENSPTIG00000008691) #14 ENSPTIG00000009364 JARID2 (ENSPTIG00000010101) #15 DTNBP1 (ENSPTIG00000010951) #16 MYLIP (ENSPTIG00000011963) #17 GMPR (ENSPTIG00000012488) #18 STMND1 (ENSPTIG00000013239) #20 CAP2 (ENSPTIG00000014061) #22 ENSPTIG00000016827 #23 NUP153 (ENSPTIG00000017212) #24 ENSPTIG00000020616 KIF13A (ENSPTIG00000000524) #25 NHLRC1 (ENSPTIG00000004396) TPMT (ENSPTIG00000010672) #26 KDM1B (ENSPTIG00000011388) #27 DEK (ENSPTIG00000012532) #28 RNF144B (ENSPTIG00000013305) #29 Cat MODERN SPECIES 236 PHACTR1 (ENSFCAG00000014551) TBC1D7 (ENSFCAG00000014552) #7 GFOD1 (ENSFCAG00000045370) #8 SIRT5 (ENSFCAG00000026646) #9 NOL7 (ENSFCAG00000032610) #10 RANBP9 (ENSFCAG00000038622) #11 MCUR1 (ENSFCAG00000005972) #12 RNF182 (ENSFCAG00000042106) #13 CD83 (ENSFCAG00000030960) #14 JARID2 (ENSFCAG00000011110) #15 DTNBP1 (ENSFCAG00000011113) #16 MYLIP (ENSFCAG00000010500) #17 GMPR (ENSFCAG00000010501) #18 ATXN1 (ENSFCAG00000011298) #19 STMND1 (ENSFCAG00000040545) #20 CAP2 (ENSFCAG00000011581) #22 FAM8A1 (ENSFCAG00000023432) #23 NUP153 (ENSFCAG00000011583) #24 KIF13A (ENSFCAG00000011587) #25 NHLRC1 (ENSFCAG00000004265) TPMT (ENSFCAG00000004266) #26 KDM1B (ENSFCAG00000004267) #27 DEK (ENSFCAG00000004268) #28 RNF144B (ENSFCAG00000035279) #29 ID4 (ENSFCAG00000042466) #30 MBOAT1 (ENSFCAG00000004587) #31 E2F3 (ENSFCAG00000041799) #32 CDKAL1 (ENSFCAG00000007206) #33 SOX4 (ENSFCAG00000045015) #35 PRL (ENSFCAG00000015035) #37 ENSFCAG00000045881 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Equus ANCESTRAL SPECIES 47 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Horse MODERN SPECIES 12 GFOD1 (ENSECAG00000022402) #8 SIRT5 (ENSECAG00000026898) #9 RANBP9 (ENSECAG00000003632) #11 NOL7 (ENSECAG00000040977) #10 ENSECAG00000048392 MCUR1 (ENSECAG00000009150) #12 RNF182 (ENSECAG00000002548) #13 CD83 (ENSECAG00000009813) #14 JARID2 (ENSECAG00000011721) #15 ENSECAG00000052367 DTNBP1 (ENSECAG00000012588) #16 MYLIP (ENSECAG00000020010) #17 GMPR (ENSECAG00000022923) #18 ATXN1 (ENSECAG00000009251) #19 STMND1 (ENSECAG00000009565) #20 CAP2 (ENSECAG00000056344) #22 CAP2 (ENSECAG00000011524) #23 NUP153 (ENSECAG00000016010) #24 KIF13A (ENSECAG00000000596) #25 NHLRC1 (ENSECAG00000002623) ENSECAG00000040090 TPMT (ENSECAG00000013653) #26 KDM1B (ENSECAG00000000331) #27 DEK (ENSECAG00000012231) #28 RNF144B (ENSECAG00000002490) #29 ENSECAG00000043011 ID4 (ENSECAG00000013428) #30 MBOAT1 (ENSECAG00000013749) #31 E2F3 (ENSECAG00000023441) #32 ENSECAG00000048099 CDKAL1 (ENSECAG00000024919) #33 Microchiroptera ANCESTRAL SPECIES 1 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 Greater horseshoe bat MODERN SPECIES 27 GFOD1 (ENSRFEG00010014368) #8 SIRT5 (ENSRFEG00010014269) #9 ENSRFEG00010014228 #10 RANBP9 (ENSRFEG00010014188) #11 MCUR1 (ENSRFEG00010014016) #12 RNF182 (ENSRFEG00010013990) #13 ENSRFEG00010013903 #14 JARID2 (ENSRFEG00010013757) #15 ENSRFEG00010013258 #16 MYLIP (ENSRFEG00010013168) #17 ENSRFEG00010013128 GMPR (ENSRFEG00010013088) #18 ATXN1 (ENSRFEG00010013033) #19 STMND1 (ENSRFEG00010012939) #20 RBM24 (ENSRFEG00010012814) #21 CAP2 (ENSRFEG00010012543) #22 FAM8A1 (ENSRFEG00010012471) #23 NUP153 (ENSRFEG00010011880) #24 ENSRFEG00010011809 NHLRC1 (ENSRFEG00010011789) TPMT (ENSRFEG00010011736) #26 KDM1B (ENSRFEG00010011616) #27 DEK (ENSRFEG00010011159) #28 RNF144B (ENSRFEG00010011064) #29 ID4 (ENSRFEG00010011011) #30 MBOAT1 (ENSRFEG00010010971) #31 E2F3 (ENSRFEG00010010820) #32 CDKAL1 (ENSRFEG00010010692) #33 SOX4 (ENSRFEG00010010645) #35 PRL (ENSRFEG00010010446) #37 HDGFL1 (ENSRFEG00010010353) Microbat MODERN SPECIES 1032 NOL7 (ENSMLUG00000014627) #10 RANBP9 (ENSMLUG00000014642) #11 MCUR1 (ENSMLUG00000010975) #12 RNF182 (ENSMLUG00000015082) #13 CD83 (ENSMLUG00000005028) #14 ENSMLUG00000030726 ENSMLUG00000026722 JARID2 (ENSMLUG00000016449) #15 ENSMLUG00000024937 #16 ENSMLUG00000016460 #16 MYLIP (ENSMLUG00000012057) #17 GMPR (ENSMLUG00000000887) #18 ATXN1 (ENSMLUG00000000896) #19 STMND1 (ENSMLUG00000022760) #20 RBM24 (ENSMLUG00000016451) #21 CAP2 (ENSMLUG00000016454) #22 ENSMLUG00000004769 #23 NUP153 (ENSMLUG00000004775) #24 ENSMLUG00000027746 #25 Megabat MODERN SPECIES 4036 CAP2 (ENSPVAG00000003759) #22 FAM8A1 (ENSPVAG00000003760) #23 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000017955.d #22 Common shrew MODERN SPECIES 946 ENSSARG00000008343 #22 Hedgehog MODERN SPECIES 1437 CAP2 (ENSEEUG00000005734) #22 Euarchontoglires ANCESTRAL SPECIES 7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Tree shrew MODERN SPECIES 442 RBM24 (ENSTBEG00000010525) #21 CAP2 (ENSTBEG00000010586) #22 Rodentia_A ANCESTRAL SPECIES 26 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Hystricomorpha ANCESTRAL SPECIES 42 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.t.a #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A.i.b #37 ENSGT00940000163720 Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.t.a #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A.i.b #37 ENSGT00530000063877.b Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.t.a #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00530000063877.b ENSGT00940000159377 ENSGT00390000009988 Long-tailed chinchilla MODERN SPECIES 190 MYLIP (ENSCLAG00000002331) #17 GMPR (ENSCLAG00000002308) #18 ATXN1 (ENSCLAG00000002212) #19 STMND1 (ENSCLAG00000002166) #20 RBM24 (ENSCLAG00000002136) #21 CAP2 (ENSCLAG00000002083) #22 ENSCLAG00000002004 #23 NUP153 (ENSCLAG00000001915) #24 KIF13A (ENSCLAG00000001873) #25 TPMT (ENSCLAG00000001801) #26 KDM1B (ENSCLAG00000001718) #27 ENSCLAG00000001955 #28 RNF144B (ENSCLAG00000001898) #29 ID4 (ENSCLAG00000001875) #30 MBOAT1 (ENSCLAG00000001819) #31 E2F3 (ENSCLAG00000001773) #32 CDKAL1 (ENSCLAG00000005861) #33 NRSN1 (ENSCLAG00000005559) DCDC2 (ENSCLAG00000005353) MRS2 (ENSCLAG00000005243) GPLD1 (ENSCLAG00000004422) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000038837 #13 CD83 (ENSHGLG00000038132) #14 ENSHGLG00000038446 ENSHGLG00000047501 ENSHGLG00000012138 JARID2 (ENSHGLG00000011742) #15 ENSHGLG00000046235 #16 ENSHGLG00000011324 #16 ENSHGLG00000041646 MYLIP (ENSHGLG00000050924) #17 GMPR (ENSHGLG00000009979) #18 ATXN1 (ENSHGLG00000009360) #19 ENSHGLG00000040391 STMND1 (ENSHGLG00000008675) #20 RBM24 (ENSHGLG00000036472) #21 CAP2 (ENSHGLG00000008022) #22 FAM8A1 (ENSHGLG00000034292) #23 NUP153 (ENSHGLG00000007924) #24 KIF13A (ENSHGLG00000013370) #25 ENSHGLG00000042459 ENSHGLG00000049766 TPMT (ENSHGLG00000045171) #26 ENSHGLG00000007385 #27 ENSHGLG00000007053 #28 ENSHGLG00000035427 #11 NOL7 (ENSHGLG00000004243) #10 Sirt5 (ENSHGLG00000004314) #9 ENSHGLG00000039377 #8 ENSHGLG00000004413 #7 ENSHGLG00000041630 PHACTR1 (ENSHGLG00000004457) Sciuridae ANCESTRAL SPECIES 1 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Marmotini ANCESTRAL SPECIES 40 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000173949 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 Marmotini_b ANCESTRAL SPECIES 68 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000173949 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435.n #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00950000182818.A.h #37 Eurasian red squirrel MODERN SPECIES 16 ENSSVLG00005013096 SIRT5 (ENSSVLG00005013489) #9 NOL7 (ENSSVLG00005013595) #10 RANBP9 (ENSSVLG00005013719) #11 ENSSVLG00005013820 #12 RNF182 (ENSSVLG00005013897) #13 CD83 (ENSSVLG00005013930) #14 JARID2 (ENSSVLG00005014062) #15 DTNBP1 (ENSSVLG00005014221) #16 ENSSVLG00005014468 MYLIP (ENSSVLG00005014516) #17 GMPR (ENSSVLG00005014572) #18 ATXN1 (ENSSVLG00005014620) #19 STMND1 (ENSSVLG00005014663) #20 RBM24 (ENSSVLG00005014752) #21 CAP2 (ENSSVLG00005014956) #22 FAM8A1 (ENSSVLG00005015605) #23 NUP153 (ENSSVLG00005015712) #24 KIF13A (ENSSVLG00005015948) #25 NHLRC1 (ENSSVLG00005016129) TPMT (ENSSVLG00005016152) #26 KDM1B (ENSSVLG00005016203) #27 ENSSVLG00005016288 #28 RNF144B (ENSSVLG00005016374) #29 ID4 (ENSSVLG00005016492) #30 MBOAT1 (ENSSVLG00005016534) #31 E2F3 (ENSSVLG00005016671) #32 CDKAL1 (ENSSVLG00005016827) #33 SOX4 (ENSSVLG00005016897) #35 PRL (ENSSVLG00005011065) #37 ENSSVLG00005011173 Rodentia_B ANCESTRAL SPECIES 8 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 Kangaroo rat MODERN SPECIES 449 Phactr1 (ENSDORG00000016302) Tbc1d7 (ENSDORG00000016305) #7 Gfod1 (ENSDORG00000008140) #8 Sirt5 (ENSDORG00000005277) #9 Nol7 (ENSDORG00000005279) #10 Ranbp9 (ENSDORG00000005280) #11 Rnf182 (ENSDORG00000004993) #13 Cd83 (ENSDORG00000003812) #14 ENSDORG00000028588 Dtnbp1 (ENSDORG00000010674) #16 Mylip (ENSDORG00000015807) #17 Gmpr (ENSDORG00000005938) #18 Atxn1 (ENSDORG00000005940) #19 Stmnd1 (ENSDORG00000026981) #20 Rbm24 (ENSDORG00000028400) #21 Cap2 (ENSDORG00000001721) #22 Fam8a1 (ENSDORG00000001730) #23 Nup153 (ENSDORG00000001736) #24 Kif13a (ENSDORG00000001741) #25 Nhlrc1 (ENSDORG00000004597) Tpmt (ENSDORG00000004600) #26 Kdm1b (ENSDORG00000004602) #27 Dek (ENSDORG00000004608) #28 Rnf144b (ENSDORG00000009557) #29 Id4 (ENSDORG00000027681) #30 Mboat1 (ENSDORG00000004718) #31 E2f3 (ENSDORG00000026090) #32 Cdkal1 (ENSDORG00000008842) #33 Myomorpha ANCESTRAL SPECIES 11 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A.f #37 ENSGT00950000182818.A.e #37 Cricetinae ANCESTRAL SPECIES 20 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.w #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT00940000163169 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a ENSGT00940000157161.b Chinese hamster chok1gshd MODERN SPECIES 317 Sirt5 (ENSCGRG00001010244) #9 Ranbp9 (ENSCGRG00001012457) #11 Nol7 (ENSCGRG00001013208) #10 Mcur1 (ENSCGRG00001014698) #12 Rnf182 (ENSCGRG00001011666) #13 Cd83 (ENSCGRG00001010584) #14 Jarid2 (ENSCGRG00001021058) #15 ENSCGRG00001019824 Dtnbp1 (ENSCGRG00001000095) #16 ENSCGRG00001015872 Mylip (ENSCGRG00001020154) #17 Gmpr (ENSCGRG00001001197) #18 Atxn1 (ENSCGRG00001022108) #19 Stmnd1 (ENSCGRG00001022532) #20 Rbm24 (ENSCGRG00001010535) #21 Cap2 (ENSCGRG00001020844) #22 Fam8a1 (ENSCGRG00001015823) #23 Nup153 (ENSCGRG00001021016) #24 Kif13a (ENSCGRG00001014277) #25 Nhlrc1 (ENSCGRG00001012520) Tpmt (ENSCGRG00001000696) #26 Kdm1b (ENSCGRG00001017531) #27 ENSCGRG00001004976 #28 Rnf144b (ENSCGRG00001009668) #29 Id4 (ENSCGRG00001009628) #30 Zfp169 (ENSCGRG00001010605) Ptpdc1 (ENSCGRG00001017296) Barx1 (ENSCGRG00001020884) Phf2 (ENSCGRG00001019829) Fam120a (ENSCGRG00001009892) Wnk2 (ENSCGRG00001020589) Golden Hamster MODERN SPECIES 623 Phactr1 (ENSMAUG00000014849) Tbc1d7 (ENSMAUG00000012343) #7 Gfod1 (ENSMAUG00000011758) #8 Sirt5 (ENSMAUG00000009867) #9 Nol7 (ENSMAUG00000005811) #10 Ranbp9 (ENSMAUG00000011112) #11 Rnf182 (ENSMAUG00000010090) #13 Cd83 (ENSMAUG00000007854) #14 Jarid2 (ENSMAUG00000019429) #15 Dtnbp1 (ENSMAUG00000000689) #16 Mylip (ENSMAUG00000014333) #17 Gmpr (ENSMAUG00000013382) #18 Atxn1 (ENSMAUG00000011491) #19 Stmnd1 (ENSMAUG00000011400) #20 Rbm24 (ENSMAUG00000011281) #21 Cap2 (ENSMAUG00000017578) #22 Fam8a1 (ENSMAUG00000016255) #23 Nup153 (ENSMAUG00000007737) #24 Kif13a (ENSMAUG00000018056) #25 Tpmt (ENSMAUG00000008198) #26 Kdm1b (ENSMAUG00000017799) #27 Dek (ENSMAUG00000007882) #28 Rnf144b (ENSMAUG00000002612) #29 Id4 (ENSMAUG00000001937) #30 Zfp169 (ENSMAUG00000001288) Ptpdc1 (ENSMAUG00000001193) Barx1 (ENSMAUG00000000432) Phf2 (ENSMAUG00000016679) Fam120a (ENSMAUG00000019860) Wnk2 (ENSMAUG00000018490) Ninj1 (ENSMAUG00000013322) Prairie vole MODERN SPECIES 3 Tbc1d7 (ENSMOCG00000009044) #7 Gfod1 (ENSMOCG00000002961) #8 ENSMOCG00000006826 #9 Nol7 (ENSMOCG00000015174) #10 Ranbp9 (ENSMOCG00000008938) #11 Mcur1 (ENSMOCG00000015720) #12 Rnf182 (ENSMOCG00000003201) #13 Cd83 (ENSMOCG00000016548) #14 Jarid2 (ENSMOCG00000001398) #15 Dtnbp1 (ENSMOCG00000012972) #16 Mylip (ENSMOCG00000017580) #17 Gmpr (ENSMOCG00000004166) #18 Atxn1 (ENSMOCG00000001527) #19 Stmnd1 (ENSMOCG00000013495) #20 Rbm24 (ENSMOCG00000016637) #21 Cap2 (ENSMOCG00000010201) #22 Fam8a1 (ENSMOCG00000000513) #23 Nup153 (ENSMOCG00000007623) #24 Kif13a (ENSMOCG00000018393) #25 Nhlrc1 (ENSMOCG00000002593) Tpmt (ENSMOCG00000021082) #26 Kdm1b (ENSMOCG00000020259) #27 Dek (ENSMOCG00000019490) #28 Rnf144b (ENSMOCG00000001126) #29 Id4 (ENSMOCG00000002195) #30 Zfp169 (ENSMOCG00000010681) Ptpdc1 (ENSMOCG00000014447) Barx1 (ENSMOCG00000000317) Phf2 (ENSMOCG00000005906) ENSMOCG00000020999 Wnk2 (ENSMOCG00000010040) Northern American deer mouse MODERN SPECIES 18 Gfod1 (ENSPEMG00000025051) #8 Sirt5 (ENSPEMG00000006919) #9 Nol7 (ENSPEMG00000013753) #10 Ranbp9 (ENSPEMG00000010137) #11 Mcur1 (ENSPEMG00000028181) #12 Rnf182 (ENSPEMG00000014628) #13 Cd83 (ENSPEMG00000017094) #14 Jarid2 (ENSPEMG00000018289) #15 Dtnbp1 (ENSPEMG00000010033) #16 Mylip (ENSPEMG00000017674) #17 Gmpr (ENSPEMG00000009461) #18 Atxn1 (ENSPEMG00000014930) #19 ENSPEMG00000024939 Stmnd1 (ENSPEMG00000018528) #20 Rbm24 (ENSPEMG00000028542) #21 Cap2 (ENSPEMG00000016116) #22 Nup153 (ENSPEMG00000020772) #24 Kif13a (ENSPEMG00000021156) #25 Nhlrc1 (ENSPEMG00000014363) ENSPEMG00000031330 Tpmt (ENSPEMG00000013719) #26 Kdm1b (ENSPEMG00000000253) #27 ENSPEMG00000011094 #28 Rnf144b (ENSPEMG00000026855) #29 Id4 (ENSPEMG00000026044) #30 Zfp169 (ENSPEMG00000000674) Ptpdc1 (ENSPEMG00000013276) ENSPEMG00000031327 Barx1 (ENSPEMG00000017288) Phf2 (ENSPEMG00000005796) Fam120a (ENSPEMG00000014076) Mus_A ANCESTRAL SPECIES 14 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT00940000163169 ENSGT00860000135640 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a Mus_B ANCESTRAL SPECIES 13 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT00940000163169 ENSGT00860000135640 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a Mus_C ANCESTRAL SPECIES 10 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00960000193183 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT00940000163169 ENSGT00860000135640 ENSGT00390000004113 ENSGT00940000160218 ENSGT00940000158148 ENSGT00530000063168.a.a.a Steppe mouse MODERN SPECIES 3253 Gmpr (ENSMSIG00000001339) #18 ENSMSIG00000001327 Atxn1 (ENSMSIG00000001295) #19 ENSMSIG00000001255 ENSMSIG00000001219 Stmnd1 (ENSMSIG00000001200) #20 Cap2 (ENSMSIG00000001134) #22 Fam8a1 (ENSMSIG00000001098) #23 Nup153 (ENSMSIG00000000986) #24 Kif13a (ENSMSIG00000000579) #25 ENSMSIG00000000532 Nhlrc1 (ENSMSIG00000000524) Tpmt (ENSMSIG00000000482) #26 Kdm1b (ENSMSIG00000000391) #27 Dek (ENSMSIG00000000269) #28 Rnf144b (ENSMSIG00000000160) #29 ENSMSIG00000025670 spretus MODERN SPECIES 4 Gfod1 (MGP_SPRETEiJ_G0019346) #8 Sirt5 (MGP_SPRETEiJ_G0019347) #9 Nol7 (MGP_SPRETEiJ_G0019348) #10 Ranbp9 (MGP_SPRETEiJ_G0019349) #11 Mcur1 (MGP_SPRETEiJ_G0019350) #12 Rnf182 (MGP_SPRETEiJ_G0019351) #13 Cd83 (MGP_SPRETEiJ_G0019352) #14 Jarid2 (MGP_SPRETEiJ_G0019353) #15 Dtnbp1 (MGP_SPRETEiJ_G0019354) #16 Mylip (MGP_SPRETEiJ_G0019355) #17 Gmpr (MGP_SPRETEiJ_G0019356) #18 Atxn1 (MGP_SPRETEiJ_G0019357) #19 MGP_SPRETEiJ_G0019358 Stmnd1 (MGP_SPRETEiJ_G0019359) #20 Rbm24 (MGP_SPRETEiJ_G0019360) #21 Cap2 (MGP_SPRETEiJ_G0019361) #22 Fam8a1 (MGP_SPRETEiJ_G0019362) #23 Nup153 (MGP_SPRETEiJ_G0019363) #24 Kif13a (MGP_SPRETEiJ_G0019364) #25 Nhlrc1 (MGP_SPRETEiJ_G0019365) Tpmt (MGP_SPRETEiJ_G0019366) #26 Kdm1b (MGP_SPRETEiJ_G0019367) #27 Dek (MGP_SPRETEiJ_G0019368) #28 Rnf144b (MGP_SPRETEiJ_G0019369) #29 Id4 (MGP_SPRETEiJ_G0019370) #30 Zfp169 (MGP_SPRETEiJ_G0019371) MGP_SPRETEiJ_G0019372 Ptpdc1 (MGP_SPRETEiJ_G0019373) Barx1 (MGP_SPRETEiJ_G0019374) Phf2 (MGP_SPRETEiJ_G0019375) Fam120a (MGP_SPRETEiJ_G0019376) Mouse MODERN SPECIES 4 Tbc1d7 (ENSMUSG00000021368) #7 Gfod1 (ENSMUSG00000051335) #8 Sirt5 (ENSMUSG00000054021) #9 Nol7 (ENSMUSG00000063200) #10 Ranbp9 (ENSMUSG00000038546) #11 Mcur1 (ENSMUSG00000021371) #12 Rnf182 (ENSMUSG00000044164) #13 Cd83 (ENSMUSG00000015396) #14 Jarid2 (ENSMUSG00000038518) #15 Dtnbp1 (ENSMUSG00000057531) #16 Mylip (ENSMUSG00000038175) #17 Gmpr (ENSMUSG00000000253) #18 Atxn1 (ENSMUSG00000046876) #19 Stmnd1 (ENSMUSG00000063529) #20 Rbm24 (ENSMUSG00000038132) #21 Cap2 (ENSMUSG00000021373) #22 Fam8a1 (ENSMUSG00000069237) #23 Nup153 (ENSMUSG00000021374) #24 Kif13a (ENSMUSG00000021375) #25 Nhlrc1 (ENSMUSG00000044231) Tpmt (ENSMUSG00000021376) #26 Kdm1b (ENSMUSG00000038080) #27 Dek (ENSMUSG00000021377) #28 Rnf144b (ENSMUSG00000038068) #29 Id4 (ENSMUSG00000021379) #30 Zfp169 (ENSMUSG00000050954) Ptpdc1 (ENSMUSG00000038042) Barx1 (ENSMUSG00000021381) Phf2 (ENSMUSG00000038025) Fam120a (ENSMUSG00000038014) Wnk2 (ENSMUSG00000037989) Ryukyu mouse MODERN SPECIES 4 Tbc1d7 (MGP_CAROLIEiJ_G0018466) #7 Gfod1 (MGP_CAROLIEiJ_G0018467) #8 Sirt5 (MGP_CAROLIEiJ_G0018468) #9 Nol7 (MGP_CAROLIEiJ_G0018469) #10 Ranbp9 (MGP_CAROLIEiJ_G0018470) #11 Mcur1 (MGP_CAROLIEiJ_G0018471) #12 Rnf182 (MGP_CAROLIEiJ_G0018472) #13 Cd83 (MGP_CAROLIEiJ_G0018473) #14 Jarid2 (MGP_CAROLIEiJ_G0018474) #15 Dtnbp1 (MGP_CAROLIEiJ_G0018475) #16 Mylip (MGP_CAROLIEiJ_G0018477) #17 Gmpr (MGP_CAROLIEiJ_G0018478) #18 Atxn1 (MGP_CAROLIEiJ_G0018479) #19 Stmnd1 (MGP_CAROLIEiJ_G0018480) #20 Rbm24 (MGP_CAROLIEiJ_G0018481) #21 Cap2 (MGP_CAROLIEiJ_G0018482) #22 Nup153 (MGP_CAROLIEiJ_G0018483) #24 Kif13a (MGP_CAROLIEiJ_G0018484) #25 Nhlrc1 (MGP_CAROLIEiJ_G0018485) Tpmt (MGP_CAROLIEiJ_G0018486) #26 Kdm1b (MGP_CAROLIEiJ_G0018487) #27 Dek (MGP_CAROLIEiJ_G0018488) #28 Rnf144b (MGP_CAROLIEiJ_G0018489) #29 Id4 (MGP_CAROLIEiJ_G0018490) #30 MGP_CAROLIEiJ_G0018491 MGP_CAROLIEiJ_G0018492 Ptpdc1 (MGP_CAROLIEiJ_G0018493) Barx1 (MGP_CAROLIEiJ_G0018494) Phf2 (MGP_CAROLIEiJ_G0018495) Fam120a (MGP_CAROLIEiJ_G0018496) Wnk2 (MGP_CAROLIEiJ_G0018497) Shrew mouse MODERN SPECIES 7 Tbc1d7 (MGP_PahariEiJ_G0019534) #7 Gfod1 (MGP_PahariEiJ_G0019535) #8 Sirt5 (MGP_PahariEiJ_G0019536) #9 Nol7 (MGP_PahariEiJ_G0019537) #10 MGP_PahariEiJ_G0019538 #11 Mcur1 (MGP_PahariEiJ_G0019539) #12 Rnf182 (MGP_PahariEiJ_G0019540) #13 Cd83 (MGP_PahariEiJ_G0019541) #14 Jarid2 (MGP_PahariEiJ_G0019542) #15 Dtnbp1 (MGP_PahariEiJ_G0019543) #16 Mylip (MGP_PahariEiJ_G0019544) #17 Gmpr (MGP_PahariEiJ_G0019545) #18 Atxn1 (MGP_PahariEiJ_G0019546) #19 Stmnd1 (MGP_PahariEiJ_G0019547) #20 Rbm24 (MGP_PahariEiJ_G0019548) #21 Cap2 (MGP_PahariEiJ_G0019549) #22 Fam8a1 (MGP_PahariEiJ_G0019550) #23 Nup153 (MGP_PahariEiJ_G0019551) #24 Kif13a (MGP_PahariEiJ_G0019552) #25 Nhlrc1 (MGP_PahariEiJ_G0019553) Tpmt (MGP_PahariEiJ_G0019554) #26 Kdm1b (MGP_PahariEiJ_G0019555) #27 Dek (MGP_PahariEiJ_G0019556) #28 Rnf144b (MGP_PahariEiJ_G0019557) #29 Id4 (MGP_PahariEiJ_G0019558) #30 Zfp169 (MGP_PahariEiJ_G0019559) Ptpdc1 (MGP_PahariEiJ_G0019560) Barx1 (MGP_PahariEiJ_G0019561) Fam120a (MGP_PahariEiJ_G0019562) Wnk2 (MGP_PahariEiJ_G0019563) MGP_PahariEiJ_G0019564 Rat MODERN SPECIES 8 Sirt5 (ENSRNOG00000017866) #9 Nol7 (ENSRNOG00000017904) #10 Ranbp9 (ENSRNOG00000017951) #11 Mcur1 (ENSRNOG00000017988) #12 Rnf182 (ENSRNOG00000018070) #13 Cd83 (ENSRNOG00000018092) #14 ENSRNOG00000062602 Jarid2 (ENSRNOG00000045918) #15 Dtnbp1 (ENSRNOG00000048719) #16 Mylip (ENSRNOG00000017579) #17 Gmpr (ENSRNOG00000017250) #18 Atxn1 (ENSRNOG00000016998) #19 Stmnd1 (ENSRNOG00000031595) #20 Rbm24 (ENSRNOG00000046547) #21 LOC102554989 (ENSRNOG00000066706) Cap2 (ENSRNOG00000043350) #22 Fam8a1 (ENSRNOG00000026120) #23 Nup153 (ENSRNOG00000001456) #24 Kif13a (ENSRNOG00000001455) #25 ENSRNOG00000065377 Nhlrc1 (ENSRNOG00000026286) Tpmt (ENSRNOG00000016468) #26 Kdm1b (ENSRNOG00000016519) #27 Dek (ENSRNOG00000016152) #28 Rnf144b (ENSRNOG00000016123) #29 Id4 (ENSRNOG00000016099) #30 Zfp169 (ENSRNOG00000017092) Barx1 (ENSRNOG00000016915) Phf2 (ENSRNOG00000016816) Fam120a (ENSRNOG00000016779) Wnk2 (ENSRNOG00000016684) Upper Galilee mountains blind mole rat MODERN SPECIES 1363 Mylip (ENSNGAG00000018222) #17 Gmpr (ENSNGAG00000019139) #18 Atxn1 (ENSNGAG00000020481) #19 Stmnd1 (ENSNGAG00000019204) #20 Rbm24 (ENSNGAG00000013939) #21 Cap2 (ENSNGAG00000018915) #22 Fam8a1 (ENSNGAG00000011299) #23 Nup153 (ENSNGAG00000013817) #24 Kif13a (ENSNGAG00000009575) #25 Nhlrc1 (ENSNGAG00000002309) ENSNGAG00000018637 #26 Kdm1b (ENSNGAG00000014480) #27 Dek (ENSNGAG00000016108) #28 Rnf144b (ENSNGAG00000001310) #29 Lesser Egyptian jerboa MODERN SPECIES 148 Nol7 (ENSJJAG00000000524) #10 Ranbp9 (ENSJJAG00000020538) #11 Mcur1 (ENSJJAG00000019380) #12 Rnf182 (ENSJJAG00000012876) #13 Cd83 (ENSJJAG00000018525) #14 ENSJJAG00000018089 ENSJJAG00000016881 Dtnbp1 (ENSJJAG00000015807) #16 Mylip (ENSJJAG00000002084) #17 Gmpr (ENSJJAG00000000548) #18 Atxn1 (ENSJJAG00000000377) #19 ENSJJAG00000000104 Stmnd1 (ENSJJAG00000022952) #20 Rbm24 (ENSJJAG00000021705) #21 ENSJJAG00000021587 Cap2 (ENSJJAG00000019352) #22 Fam8a1 (ENSJJAG00000018675) #23 Nup153 (ENSJJAG00000016760) #24 Kif13a (ENSJJAG00000014791) #25 Nhlrc1 (ENSJJAG00000023113) Pika MODERN SPECIES 2474 CAP2 (ENSOPRG00000010719) #22 Rabbit MODERN SPECIES 444 MYLIP (ENSOCUG00000008005) #17 GMPR (ENSOCUG00000017722) #18 ATXN1 (ENSOCUG00000015360) #19 STMND1 (ENSOCUG00000029494) #20 RBM24 (ENSOCUG00000033847) #21 CAP2 (ENSOCUG00000001833) #22 FAM8A1 (ENSOCUG00000002970) #23 NUP153 (ENSOCUG00000003064) #24 KIF13A (ENSOCUG00000017955) #25 ENSOCUG00000034346 ENSOCUG00000037377 NHLRC1 (ENSOCUG00000003851) ENSOCUG00000038166 TPMT (ENSOCUG00000003854) #26 KDM1B (ENSOCUG00000003859) #27 DEK (ENSOCUG00000003869) #28 ENSOCUG00000035110 RNF144B (ENSOCUG00000000543) #29 ENSOCUG00000024527 ENSOCUG00000034987 Simiiformes ANCESTRAL SPECIES 5 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00680000100037.g.a.a ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 Catarrhini ANCESTRAL SPECIES 5 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00390000018018.sb.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.r #28 ENSGT00680000100037.g.a.a ENSGT00390000017282.q #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 Hominidae ANCESTRAL SPECIES 5 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00390000018018.sb.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823.r #26 ENSGT00940000157751 #27 ENSGT00390000017282.r #28 ENSGT00680000100037.g.a.a.d ENSGT00390000017282.q #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00390000018018.sb.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00950000182878.b.a.d.b.g ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823.r #26 ENSGT00940000157751 #27 ENSGT00390000017282.r #28 ENSGT00680000100037.g.a.a.d ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00390000018018.sb.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00950000182878.b.a.d.b.g ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823.r #26 ENSGT00940000157751 #27 ENSGT00390000017282.r #28 ENSGT00680000100037.g.a.a.d ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 Chimpanzee MODERN SPECIES 19 SIRT5 (ENSPTRG00000017736) #9 NOL7 (ENSPTRG00000017737) #10 RANBP9 (ENSPTRG00000017739) #11 MCUR1 (ENSPTRG00000017740) #12 RNF182 (ENSPTRG00000045372) #13 CD83 (ENSPTRG00000017742) #14 ENSPTRG00000051316 JARID2 (ENSPTRG00000017743) #15 DTNBP1 (ENSPTRG00000047928) #16 ENSPTRG00000048360 MYLIP (ENSPTRG00000023743) #17 GMPR (ENSPTRG00000017746) #18 ATXN1 (ENSPTRG00000039250) #19 STMND1 (ENSPTRG00000048465) #20 RBM24 (ENSPTRG00000017749) #21 CAP2 (ENSPTRG00000017750) #22 ENSPTRG00000052758 FAM8A1 (ENSPTRG00000017751) #23 NUP153 (ENSPTRG00000017752) #24 KIF13A (ENSPTRG00000017753) #25 NHLRC1 (ENSPTRG00000017755) ENSPTRG00000044124 TPMT (ENSPTRG00000017756) #26 KDM1B (ENSPTRG00000017757) #27 DEK (ENSPTRG00000017758) #28 ENSPTRG00000045036 RNF144B (ENSPTRG00000017759) #29 ID4 (ENSPTRG00000052245) #30 MBOAT1 (ENSPTRG00000017761) #31 E2F3 (ENSPTRG00000023584) #32 ENSPTRG00000044315 Human MODERN SPECIES 18 GFOD1 (ENSG00000145990) #8 SIRT5 (ENSG00000124523) #9 NOL7 (ENSG00000225921) #10 RANBP9 (ENSG00000010017) #11 MCUR1 (ENSG00000050393) #12 RNF182 (ENSG00000180537) #13 CD83 (ENSG00000112149) #14 JARID2 (ENSG00000008083) #15 DTNBP1 (ENSG00000047579) #16 MYLIP (ENSG00000007944) #17 GMPR (ENSG00000137198) #18 ATXN1 (ENSG00000124788) #19 ENSG00000288708 STMND1 (ENSG00000230873) #20 RBM24 (ENSG00000112183) #21 CAP2 (ENSG00000112186) #22 FAM8A1 (ENSG00000137414) #23 NUP153 (ENSG00000124789) #24 KIF13A (ENSG00000137177) #25 NHLRC1 (ENSG00000187566) TPMT (ENSG00000137364) #26 KDM1B (ENSG00000165097) #27 DEK (ENSG00000124795) #28 RNF144B (ENSG00000137393) #29 ID4 (ENSG00000172201) #30 MBOAT1 (ENSG00000172197) #31 E2F3 (ENSG00000112242) #32 CDKAL1 (ENSG00000145996) #33 SOX4 (ENSG00000124766) #35 PRL (ENSG00000172179) #37 HDGFL1 (ENSG00000112273) Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000156080.d #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.r.a.a #28 ENSGT00390000017282.q #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 Vervet Monkey MODERN SPECIES 8 GFOD1 (ENSCSAG00000007527) #8 SIRT5 (ENSCSAG00000007530) #9 NOL7 (ENSCSAG00000007535) #10 ENSCSAG00000007542 RANBP9 (ENSCSAG00000007548) #11 MCUR1 (ENSCSAG00000007553) #12 RNF182 (ENSCSAG00000019108) #13 CD83 (ENSCSAG00000007558) #14 JARID2 (ENSCSAG00000007566) #15 DTNBP1 (ENSCSAG00000007575) #16 MYLIP (ENSCSAG00000007580) #17 GMPR (ENSCSAG00000007585) #18 ATXN1 (ENSCSAG00000007589) #19 ENSCSAG00000007596 #20 RBM24 (ENSCSAG00000007599) #21 CAP2 (ENSCSAG00000007609) #22 ENSCSAG00000019107 FAM8A1 (ENSCSAG00000007614) #23 NUP153 (ENSCSAG00000007624) #24 KIF13A (ENSCSAG00000007634) #25 NHLRC1 (ENSCSAG00000019106) TPMT (ENSCSAG00000007638) #26 KDM1B (ENSCSAG00000007648) #27 ENSCSAG00000007654 #28 RNF144B (ENSCSAG00000007660) #29 ID4 (ENSCSAG00000007666) #30 MBOAT1 (ENSCSAG00000007674) #31 ENSCSAG00000007678 #32 CDKAL1 (ENSCSAG00000007697) #33 SOX4 (ENSCSAG00000019105) #35 PRL (ENSCSAG00000007700) #37 Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000156080.d #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT00940000166898.a.a.b.b.a.a.b.b.a ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.r.a.a #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 Macaca ANCESTRAL SPECIES 23 ENSGT00940000156080.c.a #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT00940000166898.a.a.b.b.a.a.b.b.a.b ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.r.a.a #28 ENSGT00940000154156.d.n.a.a ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 Pig-tailed macaque MODERN SPECIES 581 ENSMNEG00000029019 #9 NOL7 (ENSMNEG00000034369) #10 RANBP9 (ENSMNEG00000032264) #11 MCUR1 (ENSMNEG00000038729) #12 RNF182 (ENSMNEG00000026923) #13 CD83 (ENSMNEG00000042578) #14 JARID2 (ENSMNEG00000030214) #15 DTNBP1 (ENSMNEG00000044273) #16 MYLIP (ENSMNEG00000040602) #17 GMPR (ENSMNEG00000041399) #18 ENSMNEG00000039316 ATXN1 (ENSMNEG00000036667) #19 ENSMNEG00000010032 STMND1 (ENSMNEG00000037796) #20 RBM24 (ENSMNEG00000040710) #21 CAP2 (ENSMNEG00000036448) #22 FAM8A1 (ENSMNEG00000031907) #23 NUP153 (ENSMNEG00000038011) #24 KIF13A (ENSMNEG00000043686) #25 NHLRC1 (ENSMNEG00000000708) ENSMNEG00000030039 TPMT (ENSMNEG00000012955) #26 KDM1B (ENSMNEG00000032325) #27 ENSMNEG00000043114 #28 ENSMNEG00000033461 RNF144B (ENSMNEG00000027976) #29 ID4 (ENSMNEG00000045436) #30 MBOAT1 (ENSMNEG00000036169) #31 E2F3 (ENSMNEG00000043583) #32 ENSMNEG00000031727 CDKAL1 (ENSMNEG00000034861) #33 Rhesus MODERN SPECIES 14 MCUR1 (ENSMMUG00000009922) #12 RNF182 (ENSMMUG00000002501) #13 CD83 (ENSMMUG00000020289) #14 ENSMMUG00000055673 ENSMMUG00000022489 ENSMMUG00000049783 JARID2 (ENSMMUG00000015362) #15 DTNBP1 (ENSMMUG00000015363) #16 ENSMMUG00000052891 MYLIP (ENSMMUG00000057657) #17 GMPR (ENSMMUG00000002936) #18 ATXN1 (ENSMMUG00000002940) #19 STMND1 (ENSMMUG00000062637) #20 RBM24 (ENSMMUG00000011384) #21 ENSMMUG00000064319 CAP2 (ENSMMUG00000001990) #22 FAM8A1 (ENSMMUG00000001992) #23 NUP153 (ENSMMUG00000001993) #24 ENSMMUG00000038815 KIF13A (ENSMMUG00000010731) #25 ENSMMUG00000064436 NHLRC1 (ENSMMUG00000016626) TPMT (ENSMMUG00000016627) #26 KDM1B (ENSMMUG00000018575) #27 DEK (ENSMMUG00000019763) #28 ENSMMUG00000052333 RNF144B (ENSMMUG00000062089) #29 ENSMMUG00000059505 ENSMMUG00000051885 ID4 (ENSMMUG00000014691) #30 MBOAT1 (ENSMMUG00000017425) #31 Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00940000156080.d #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT00940000166898.a.a.b.b.a.a.b.b.a ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.r.a.a #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 Olive baboon MODERN SPECIES 16 ENSPANG00000047219 JARID2 (ENSPANG00000022702) #15 DTNBP1 (ENSPANG00000017015) #16 ENSPANG00000046474 MYLIP (ENSPANG00000017017) #17 GMPR (ENSPANG00000025048) #18 ATXN1 (ENSPANG00000024249) #19 ENSPANG00000044991 STMND1 (ENSPANG00000011104) #20 ENSPANG00000050773 RBM24 (ENSPANG00000049896) #21 ENSPANG00000043257 ENSPANG00000048691 ENSPANG00000034900 ENSPANG00000046411 CAP2 (ENSPANG00000019959) #22 FAM8A1 (ENSPANG00000016968) #23 NUP153 (ENSPANG00000015139) #24 KIF13A (ENSPANG00000011103) #25 NHLRC1 (ENSPANG00000018224) TPMT (ENSPANG00000036187) #26 KDM1B (ENSPANG00000013806) #27 ENSPANG00000021240 #28 ENSPANG00000049623 ENSPANG00000034546 RNF144B (ENSPANG00000011335) #29 ID4 (ENSPANG00000050691) #30 MBOAT1 (ENSPANG00000024248) #31 ENSPANG00000047423 ENSPANG00000045773 E2F3 (ENSPANG00000010502) #32 Drill MODERN SPECIES 1536 CAP2 (ENSMLEG00000032098) #22 FAM8A1 (ENSMLEG00000037907) #23 NUP153 (ENSMLEG00000030776) #24 KIF13A (ENSMLEG00000039580) #25 ENSMLEG00000036472 NHLRC1 (ENSMLEG00000027331) ENSMLEG00000042982 TPMT (ENSMLEG00000038243) #26 KDM1B (ENSMLEG00000036724) #27 ENSMLEG00000030349 #28 Sooty mangabey MODERN SPECIES 385 SIRT5 (ENSCATG00000015428) #9 NOL7 (ENSCATG00000040146) #10 RANBP9 (ENSCATG00000039648) #11 MCUR1 (ENSCATG00000044226) #12 RNF182 (ENSCATG00000021948) #13 CD83 (ENSCATG00000032797) #14 JARID2 (ENSCATG00000032460) #15 DTNBP1 (ENSCATG00000032886) #16 MYLIP (ENSCATG00000043137) #17 GMPR (ENSCATG00000030446) #18 ENSCATG00000033312 ATXN1 (ENSCATG00000042777) #19 ENSCATG00000003610 STMND1 (ENSCATG00000045376) #20 RBM24 (ENSCATG00000010509) #21 CAP2 (ENSCATG00000037403) #22 FAM8A1 (ENSCATG00000012676) #23 NUP153 (ENSCATG00000041429) #24 KIF13A (ENSCATG00000002487) #25 ENSCATG00000044792 ENSCATG00000029938 NHLRC1 (ENSCATG00000002581) ENSCATG00000028687 TPMT (ENSCATG00000030815) #26 KDM1B (ENSCATG00000042804) #27 ENSCATG00000031913 #28 ENSCATG00000035019 RNF144B (ENSCATG00000030827) #29 ID4 (ENSCATG00000039220) #30 MBOAT1 (ENSCATG00000031545) #31 E2F3 (ENSCATG00000039889) #32 Rhinopithecus ANCESTRAL SPECIES 116 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00390000018018.sb.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282.q #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 Black snub-nosed monkey DUPLICATION Black snub-nosed monkey MODERN SPECIES 455 ENSRBIG00000001068 ENSRBIG00000034078 #22 ENSRBIG00000011549 ENSRBIG00000036646 VSTM2B (ENSRBIG00000043416) POP4 (ENSRBIG00000044769) PLEKHF1 (ENSRBIG00000015740) C19orf12 (ENSRBIG00000039475) CCNE1 (ENSRBIG00000032298) ENSRBIG00000024225 ENSRBIG00000039664 ZNF536 (ENSRBIG00000039506) TSHZ3 (ENSRBIG00000026412) ZNF507 (ENSRBIG00000034646) DPY19L3 (ENSRBIG00000030615) Platyrrhini ANCESTRAL SPECIES 34 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a.c.a #19 ENSGT00390000005939.a.a.d #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00910000148757 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00680000100037.g.a.a.b ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 Cebidae ANCESTRAL SPECIES 33 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a.d #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00680000100037.g.a.a.b ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Cebidae_a ANCESTRAL SPECIES 42 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a.d #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00680000100037.g.a.a.b ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Capuchin MODERN SPECIES 21 SIRT5 (ENSCCAG00000037265) #9 NOL7 (ENSCCAG00000029996) #10 RANBP9 (ENSCCAG00000033244) #11 ENSCCAG00000032733 MCUR1 (ENSCCAG00000028708) #12 RNF182 (ENSCCAG00000019170) #13 CD83 (ENSCCAG00000032364) #14 JARID2 (ENSCCAG00000018272) #15 DTNBP1 (ENSCCAG00000036512) #16 ENSCCAG00000022466 MYLIP (ENSCCAG00000023590) #17 GMPR (ENSCCAG00000021522) #18 ATXN1 (ENSCCAG00000018590) #19 STMND1 (ENSCCAG00000017508) #20 RBM24 (ENSCCAG00000030791) #21 CAP2 (ENSCCAG00000033725) #22 FAM8A1 (ENSCCAG00000019876) #23 NUP153 (ENSCCAG00000024038) #24 ENSCCAG00000003528 KIF13A (ENSCCAG00000020851) #25 NHLRC1 (ENSCCAG00000005020) TPMT (ENSCCAG00000019158) #26 KDM1B (ENSCCAG00000021864) #27 DEK (ENSCCAG00000031656) #28 RNF144B (ENSCCAG00000024520) #29 ENSCCAG00000033718 TGFBR2 (ENSCCAG00000022409) GADL1 (ENSCCAG00000020686) STT3B (ENSCCAG00000028345) OSBPL10 (ENSCCAG00000028004) GPD1L (ENSCCAG00000026946) Bolivian squirrel monkey MODERN SPECIES 64 NOL7 (ENSSBOG00000020450) #10 RANBP9 (ENSSBOG00000029468) #11 ENSSBOG00000032159 #12 RNF182 (ENSSBOG00000019678) #13 CD83 (ENSSBOG00000022214) #14 ENSSBOG00000035633 ENSSBOG00000028490 JARID2 (ENSSBOG00000021029) #15 DTNBP1 (ENSSBOG00000027094) #16 MYLIP (ENSSBOG00000021159) #17 GMPR (ENSSBOG00000022943) #18 ENSSBOG00000017381 #19 STMND1 (ENSSBOG00000027713) #20 ENSSBOG00000026237 RBM24 (ENSSBOG00000030002) #21 CAP2 (ENSSBOG00000034008) #22 FAM8A1 (ENSSBOG00000027114) #23 NUP153 (ENSSBOG00000024532) #24 KIF13A (ENSSBOG00000028035) #25 NHLRC1 (ENSSBOG00000005358) TPMT (ENSSBOG00000031874) #26 KDM1B (ENSSBOG00000031163) #27 DEK (ENSSBOG00000020843) #28 ENSSBOG00000034289 RNF144B (ENSSBOG00000024327) #29 ENSSBOG00000022170 ENSSBOG00000021265 MBOAT1 (ENSSBOG00000031025) #31 E2F3 (ENSSBOG00000031946) #32 CDKAL1 (ENSSBOG00000035614) #33 PRL (ENSSBOG00000024760) #37 Marmoset MODERN SPECIES 16 CD83 (ENSCJAG00000039142) #14 ENSCJAG00000074831 ENSCJAG00000081039 ENSCJAG00000076300 JARID2 (ENSCJAG00000005717) #15 ENSCJAG00000072308 DTNBP1 (ENSCJAG00000005751) #16 ENSCJAG00000078076 #17 GMPR (ENSCJAG00000006527) #18 ATXN1 (ENSCJAG00000006563) #19 ENSCJAG00000087290 ENSCJAG00000075546 ENSCJAG00000052698 STMND1 (ENSCJAG00000059273) #20 RBM24 (ENSCJAG00000064665) #21 CAP2 (ENSCJAG00000006598) #22 FAM8A1 (ENSCJAG00000006674) #23 NUP153 (ENSCJAG00000006685) #24 KIF13A (ENSCJAG00000006752) #25 NHLRC1 (ENSCJAG00000039154) TPMT (ENSCJAG00000006906) #26 KDM1B (ENSCJAG00000006934) #27 DEK (ENSCJAG00000006952) #28 RNF144B (ENSCJAG00000006964) #29 ENSCJAG00000023418 ENSCJAG00000003742 ENSCJAG00000075571 ENSCJAG00000070196 ENSCJAG00000084443 ID4 (ENSCJAG00000083070) #30 ENSCJAG00000081053 Mas night monkey MODERN SPECIES 986 TBC1D7 (ENSANAG00000028789) #7 GFOD1 (ENSANAG00000026340) #8 SIRT5 (ENSANAG00000026376) #9 NOL7 (ENSANAG00000035792) #10 RANBP9 (ENSANAG00000021012) #11 MCUR1 (ENSANAG00000019439) #12 RNF182 (ENSANAG00000019467) #13 CD83 (ENSANAG00000032342) #14 JARID2 (ENSANAG00000020578) #15 DTNBP1 (ENSANAG00000026230) #16 MYLIP (ENSANAG00000011548) #17 GMPR (ENSANAG00000026769) #18 ENSANAG00000025206 #19 STMND1 (ENSANAG00000034197) #20 RBM24 (ENSANAG00000029310) #21 CAP2 (ENSANAG00000035563) #22 FAM8A1 (ENSANAG00000033334) #23 NUP153 (ENSANAG00000001808) #24 KIF13A (ENSANAG00000022469) #25 ENSANAG00000034683 NHLRC1 (ENSANAG00000008212) TPMT (ENSANAG00000035923) #26 KDM1B (ENSANAG00000033956) #27 DEK (ENSANAG00000032069) #28 ENSANAG00000026802 RNF144B (ENSANAG00000026795) #29 ENSANAG00000021271 ID4 (ENSANAG00000025640) #30 MBOAT1 (ENSANAG00000032005) #31 E2F3 (ENSANAG00000006402) #32 ENSANAG00000028899 Tarsier MODERN SPECIES 4514 RBM24 (ENSTSYG00000031245) #21 CAP2 (ENSTSYG00000011383) #22 FAM8A1 (ENSTSYG00000031461) #23 NUP153 (ENSTSYG00000001251) #24 KIF13A (ENSTSYG00000004469) #25 Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Bushbaby MODERN SPECIES 141 ENSOGAG00000011087 #9 NOL7 (ENSOGAG00000013445) #10 RANBP9 (ENSOGAG00000013455) #11 MCUR1 (ENSOGAG00000013458) #12 ENSOGAG00000033063 RNF182 (ENSOGAG00000026480) #13 CD83 (ENSOGAG00000014245) #14 JARID2 (ENSOGAG00000014876) #15 DTNBP1 (ENSOGAG00000014881) #16 MYLIP (ENSOGAG00000006071) #17 GMPR (ENSOGAG00000006073) #18 ATXN1 (ENSOGAG00000028623) #19 ENSOGAG00000025254 STMND1 (ENSOGAG00000033742) #20 RBM24 (ENSOGAG00000027311) #21 CAP2 (ENSOGAG00000027194) #22 FAM8A1 (ENSOGAG00000026076) #23 NUP153 (ENSOGAG00000014899) #24 KIF13A (ENSOGAG00000014904) #25 NHLRC1 (ENSOGAG00000007737) TPMT (ENSOGAG00000007738) #26 KDM1B (ENSOGAG00000007744) #27 DEK (ENSOGAG00000007750) #28 RNF144B (ENSOGAG00000007755) #29 ENSOGAG00000026614 ENSOGAG00000031663 ID4 (ENSOGAG00000033346) #30 MBOAT1 (ENSOGAG00000010766) #31 E2F3 (ENSOGAG00000004347) #32 CDKAL1 (ENSOGAG00000015955) #33 ENSOGAG00000014939 Lemuriformes ANCESTRAL SPECIES 56 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00910000148242 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00910000146970 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00910000146900 ENSGT00940000155952 #33 ENSGT00940000161470 #35 Atlantogenata ANCESTRAL SPECIES 80 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 Afrotheria ANCESTRAL SPECIES 69 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00390000016205 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 ENSGT00530000063877.b Tenrec MODERN SPECIES 1389 CAP2 (ENSETEG00000017461) #22 Afrotheria_a ANCESTRAL SPECIES 68 ENSGT00940000155842 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00940000163720 ENSGT00530000063877.b Elephant MODERN SPECIES 397 TBC1D7 (ENSLAFG00000006328) #7 GFOD1 (ENSLAFG00000002643) #8 SIRT5 (ENSLAFG00000007505) #9 NOL7 (ENSLAFG00000010434) #10 RANBP9 (ENSLAFG00000010441) #11 MCUR1 (ENSLAFG00000003287) #12 ENSLAFG00000029171 CD83 (ENSLAFG00000017967) #14 JARID2 (ENSLAFG00000009038) #15 ENSLAFG00000009045 #16 MYLIP (ENSLAFG00000005663) #17 GMPR (ENSLAFG00000015222) #18 ATXN1 (ENSLAFG00000015231) #19 STMND1 (ENSLAFG00000026388) #20 RBM24 (ENSLAFG00000000116) #21 CAP2 (ENSLAFG00000011419) #22 FAM8A1 (ENSLAFG00000015900) #23 NUP153 (ENSLAFG00000015905) #24 KIF13A (ENSLAFG00000008598) #25 TPMT (ENSLAFG00000011632) #26 KDM1B (ENSLAFG00000004467) #27 DEK (ENSLAFG00000004470) #28 RNF144B (ENSLAFG00000013923) #29 ID4 (ENSLAFG00000014467) #30 ENSLAFG00000029188 MBOAT1 (ENSLAFG00000008346) #31 E2F3 (ENSLAFG00000000232) #32 CDKAL1 (ENSLAFG00000000235) #33 SOX4 (ENSLAFG00000018401) #35 ENSLAFG00000030577 PRL (ENSLAFG00000022270) #37 Hyrax MODERN SPECIES 1068 CAP2 (ENSPCAG00000001988) #22 Xenarthra ANCESTRAL SPECIES 886 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 Sloth MODERN SPECIES 1173 ENSCHOG00000003122 #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3201 ENSDNOG00000011088 ENSDNOG00000030706 #22 ENSDNOG00000030986 ENSDNOG00000049650 Armadillo MODERN SPECIES 4796 ENSDNOG00000044267 STMND1 (ENSDNOG00000044643) #20 RBM24 (ENSDNOG00000047488) #21 CAP2 (ENSDNOG00000041209) #22 FAM8A1 (ENSDNOG00000001150) #23 NUP153 (ENSDNOG00000001153) #24 KIF13A (ENSDNOG00000008378) #25 ENSDNOG00000034807 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b Diprotodontia ANCESTRAL SPECIES 1 ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b.c Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000009122 #7 ENSGT00940000160837 #8 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00940000157751 #27 ENSGT00390000017282 #28 ENSGT00940000158819 #29 ENSGT00940000162435 #30 ENSGT01030000234564.a.a.a.a.a #31 ENSGT00940000155115.a.a #32 ENSGT00940000155952 #33 ENSGT00940000161470 #35 ENSGT00950000182818.A #37 ENSGT00530000063877.b.c Common wonbat MODERN SPECIES 34 TBC1D7 (ENSVURG00010003062) #7 GFOD1 (ENSVURG00010003031) #8 SIRT5 (ENSVURG00010003015) #9 NOL7 (ENSVURG00010002999) #10 RANBP9 (ENSVURG00010002990) #11 ENSVURG00010002910 #12 RNF182 (ENSVURG00010002887) #13 ENSVURG00010002848 #14 ENSVURG00010002836 DTNBP1 (ENSVURG00010002784) #16 MYLIP (ENSVURG00010002708) #17 GMPR (ENSVURG00010002686) #18 ATXN1 (ENSVURG00010002666) #19 STMND1 (ENSVURG00010002576) #20 RBM24 (ENSVURG00010002571) #21 CAP2 (ENSVURG00010002496) #22 ENSVURG00010002466 #23 NUP153 (ENSVURG00010002325) #24 KIF13A (ENSVURG00010002158) #25 NHLRC1 (ENSVURG00010002104) TPMT (ENSVURG00010002092) #26 ENSVURG00010002073 #27 ENSVURG00010002060 #27 DEK (ENSVURG00010001997) #28 ENSVURG00010001981 RNF144B (ENSVURG00010001966) #29 ID4 (ENSVURG00010001841) #30 MBOAT1 (ENSVURG00010001763) #31 E2F3 (ENSVURG00010001724) #32 ENSVURG00010001713 CDKAL1 (ENSVURG00010001661) #33 koala MODERN SPECIES 26 ENSPCIG00000030610 #9 RANBP9 (ENSPCIG00000030609) #11 MCUR1 (ENSPCIG00000026507) #12 RNF182 (ENSPCIG00000028471) #13 ENSPCIG00000034826 #14 JARID2 (ENSPCIG00000021847) #15 DTNBP1 (ENSPCIG00000021845) #16 MYLIP (ENSPCIG00000019393) #17 GMPR (ENSPCIG00000019404) #18 ATXN1 (ENSPCIG00000019413) #19 STMND1 (ENSPCIG00000029671) #20 RBM24 (ENSPCIG00000029674) #21 CAP2 (ENSPCIG00000029676) #22 FAM8A1 (ENSPCIG00000029677) #23 NUP153 (ENSPCIG00000029680) #24 KIF13A (ENSPCIG00000029682) #25 NHLRC1 (ENSPCIG00000013366) TPMT (ENSPCIG00000029690) #26 KDM1B (ENSPCIG00000029691) #27 DEK (ENSPCIG00000029694) #28 RNF144B (ENSPCIG00000017634) #29 ID4 (ENSPCIG00000030091) #30 MBOAT1 (ENSPCIG00000030094) #31 E2F3 (ENSPCIG00000030097) #32 CDKAL1 (ENSPCIG00000030099) #33 SOX4 (ENSPCIG00000008319) #35 PRL (ENSPCIG00000008331) #37 ENSPCIG00000032277 Wallaby MODERN SPECIES 2102 ENSMEUG00000003101 #22 Tasmanian devil MODERN SPECIES ENSSHAG00000007208 #8 ENSSHAG00000023776 #8 SIRT5 (ENSSHAG00000005063) #9 ENSSHAG00000026849 #10 RANBP9 (ENSSHAG00000023308) #11 MCUR1 (ENSSHAG00000022263) #12 RNF182 (ENSSHAG00000023143) #13 ENSSHAG00000029894 #14 JARID2 (ENSSHAG00000000064) #15 DTNBP1 (ENSSHAG00000018795) #16 MYLIP (ENSSHAG00000018481) #17 GMPR (ENSSHAG00000023377) #18 ATXN1 (ENSSHAG00000021762) #19 STMND1 (ENSSHAG00000022836) #20 RBM24 (ENSSHAG00000024099) #21 CAP2 (ENSSHAG00000016266) #22 FAM8A1 (ENSSHAG00000031589) #23 NUP153 (ENSSHAG00000031841) #24 KIF13A (ENSSHAG00000015411) #25 NHLRC1 (ENSSHAG00000015039) TPMT (ENSSHAG00000030718) #26 KDM1B (ENSSHAG00000014810) #27 DEK (ENSSHAG00000014678) #28 RNF144B (ENSSHAG00000013434) #29 ID4 (ENSSHAG00000031770) #30 MBOAT1 (ENSSHAG00000016486) #31 E2F3 (ENSSHAG00000023717) #32 CDKAL1 (ENSSHAG00000013159) #33 SOX4 (ENSSHAG00000027520) #35 PRL (ENSSHAG00000003994) #37 ENSSHAG00000008496 Opossum MODERN SPECIES 2 SIRT5 (ENSMODG00000010636) #9 NOL7 (ENSMODG00000010641) #10 RANBP9 (ENSMODG00000010656) #11 MCUR1 (ENSMODG00000050404) #12 ENSMODG00000050817 RNF182 (ENSMODG00000024624) #13 ENSMODG00000010683 #14 ENSMODG00000024626 JARID2 (ENSMODG00000010746) #15 DTNBP1 (ENSMODG00000010762) #16 MYLIP (ENSMODG00000010806) #17 GMPR (ENSMODG00000044598) #18 ATXN1 (ENSMODG00000010827) #19 STMND1 (ENSMODG00000010886) #20 RBM24 (ENSMODG00000037925) #21 CAP2 (ENSMODG00000010920) #22 FAM8A1 (ENSMODG00000024641) #23 NUP153 (ENSMODG00000010951) #24 KIF13A (ENSMODG00000011220) #25 NHLRC1 (ENSMODG00000011227) TPMT (ENSMODG00000024655) #26 KDM1B (ENSMODG00000011270) #27 ENSMODG00000011291 #28 RNF144B (ENSMODG00000044445) #29 ID4 (ENSMODG00000011307) #30 MBOAT1 (ENSMODG00000011322) #31 E2F3 (ENSMODG00000011331) #32 ENSMODG00000050049 #33 CDKAL1 (ENSMODG00000024659) #33 SOX4 (ENSMODG00000011338) #35 PRL (ENSMODG00000011350) #37 Platypus MODERN SPECIES 85 ENSOANG00000037879 PHACTR1 (ENSOANG00000037262) GFOD1 (ENSOANG00000006980) #8 SIRT5 (ENSOANG00000006976) #9 RANBP9 (ENSOANG00000006975) #11 MCUR1 (ENSOANG00000041483) #12 RNF182 (ENSOANG00000001411) #13 ENSOANG00000050994 #14 JARID2 (ENSOANG00000011869) #15 DTNBP1 (ENSOANG00000011868) #16 MYLIP (ENSOANG00000003448) #17 GMPR (ENSOANG00000048791) #18 ATXN1 (ENSOANG00000046957) #19 ENSOANG00000038805 RBM24 (ENSOANG00000044656) #21 CAP2 (ENSOANG00000011863) #22 FAM8A1 (ENSOANG00000048381) #23 NUP153 (ENSOANG00000011858) #24 KIF13A (ENSOANG00000011853) #25 NHLRC1 (ENSOANG00000011852) ENSOANG00000011850 #26 ENSOANG00000046949 #27 ENSOANG00000011848 #27 DEK (ENSOANG00000011845) #28 RNF144B (ENSOANG00000011844) #29 ENSOANG00000049175 #30 MBOAT1 (ENSOANG00000011842) #31 E2F3 (ENSOANG00000040523) #32 CDKAL1 (ENSOANG00000011129) #33 SOX4 (ENSOANG00000049334) #35 PRL (ENSOANG00000011127) #37 Sauria ANCESTRAL SPECIES ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b Lepidosauria ANCESTRAL SPECIES 2 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Laterata ANCESTRAL SPECIES 5 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00950000182866.D.d.b ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Common wall lizard MODERN SPECIES 15 KIF13A (ENSPMRG00000007518) #25 SIRT5 (ENSPMRG00000009851) #9 ENSPMRG00000009889 #10 RANBP9 (ENSPMRG00000009912) #11 MCUR1 (ENSPMRG00000009938) #12 RNF182 (ENSPMRG00000009960) #13 JARID2 (ENSPMRG00000009977) #15 DTNBP1 (ENSPMRG00000010014) #16 ENSPMRG00000010027 ENSPMRG00000010031 ENSPMRG00000010034 MYLIP (ENSPMRG00000010042) #17 GMPR (ENSPMRG00000010048) #18 ATXN1 (ENSPMRG00000010054) #19 RBM24 (ENSPMRG00000010058) #21 CAP2 (ENSPMRG00000010062) #22 FAM8A1 (ENSPMRG00000010067) #23 NUP153 (ENSPMRG00000010107) #24 ENSPMRG00000010240 PAK1IP1 (ENSPMRG00000010250) ENSPMRG00000010256 GFOD1 (ENSPMRG00000010263) #8 TBC1D7 (ENSPMRG00000010268) #7 PHACTR1 (ENSPMRG00000010283) ENSPMRG00000010311 EDN1 (ENSPMRG00000010316) HIVEP1 (ENSPMRG00000010329) ADTRP (ENSPMRG00000004899) TMEM170B (ENSPMRG00000004906) ENSPMRG00000004910 ENSPMRG00000004916 Argentine black and white tegu MODERN SPECIES 4 KIF13A (ENSSMRG00000005690) #25 SIRT5 (ENSSMRG00000005719) #9 NOL7 (ENSSMRG00000005722) #10 RANBP9 (ENSSMRG00000005725) #11 MCUR1 (ENSSMRG00000005735) #12 RNF182 (ENSSMRG00000005741) #13 ENSSMRG00000005893 CD83 (ENSSMRG00000005894) #14 JARID2 (ENSSMRG00000006063) #15 DTNBP1 (ENSSMRG00000006083) #16 ENSSMRG00000006153 MYLIP (ENSSMRG00000006185) #17 GMPR (ENSSMRG00000006210) #18 ATXN1 (ENSSMRG00000006238) #19 RBM24 (ENSSMRG00000006298) #21 CAP2 (ENSSMRG00000006303) #22 FAM8A1 (ENSSMRG00000006314) #23 NUP153 (ENSSMRG00000006320) #24 ENSSMRG00000006332 PAK1IP1 (ENSSMRG00000006371) ENSSMRG00000006376 GFOD1 (ENSSMRG00000006380) #8 ENSSMRG00000006382 TBC1D7 (ENSSMRG00000006387) #7 PHACTR1 (ENSSMRG00000006410) ENSSMRG00000006424 EDN1 (ENSSMRG00000006432) HIVEP1 (ENSSMRG00000006439) ADTRP (ENSSMRG00000006459) TMEM170B (ENSSMRG00000006486) NEDD9 (ENSSMRG00000006490) Toxicofera ANCESTRAL SPECIES 8 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Elapidae ANCESTRAL SPECIES 8 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b.b ENSGT00560000078630 Elapidae_a ANCESTRAL SPECIES 14 ENSGT00940000157751 #27 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b.b ENSGT00560000078630 Blue-lipped sea krait MODERN SPECIES 313 RBM24 (ENSLLTG00000014409) #21 CAP2 (ENSLLTG00000014413) #22 Acanthophiinae ANCESTRAL SPECIES 16 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00990000211037 ENSGT00950000182935.B.a.f ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b.b ENSGT00560000078630 Eastern brown snake MODERN SPECIES 11 NHLRC1 (ENSPTXG00000000836) KIF13A (ENSPTXG00000000844) #25 SIRT5 (ENSPTXG00000000858) #9 NOL7 (ENSPTXG00000000860) #10 RANBP9 (ENSPTXG00000000864) #11 MCUR1 (ENSPTXG00000000868) #12 RNF182 (ENSPTXG00000000901) #13 ENSPTXG00000000904 ENSPTXG00000000907 JARID2 (ENSPTXG00000000910) #15 DTNBP1 (ENSPTXG00000000915) #16 MYLIP (ENSPTXG00000000923) #17 GMPR (ENSPTXG00000000929) #18 ATXN1 (ENSPTXG00000000937) #19 RBM24 (ENSPTXG00000000939) #21 CAP2 (ENSPTXG00000000945) #22 FAM8A1 (ENSPTXG00000000952) #23 NUP153 (ENSPTXG00000000959) #24 ENSPTXG00000000970 PAK1IP1 (ENSPTXG00000000977) TMEM14C (ENSPTXG00000000982) GFOD1 (ENSPTXG00000000983) #8 TBC1D7 (ENSPTXG00000000986) #7 PHACTR1 (ENSPTXG00000000991) ENSPTXG00000001005 EDN1 (ENSPTXG00000001007) HIVEP1 (ENSPTXG00000001010) ADTRP (ENSPTXG00000001016) TMEM170B (ENSPTXG00000001057) ENSPTXG00000001060 Mainland tiger snake MODERN SPECIES 30 SIRT5 (ENSNSUG00000016969) #9 NOL7 (ENSNSUG00000017035) #10 ENSNSUG00000017036 #11 ENSNSUG00000017037 #11 MCUR1 (ENSNSUG00000017038) #12 RNF182 (ENSNSUG00000017039) #13 ENSNSUG00000017040 ENSNSUG00000017041 JARID2 (ENSNSUG00000017042) #15 ENSNSUG00000017057 DTNBP1 (ENSNSUG00000017060) #16 MYLIP (ENSNSUG00000017063) #17 GMPR (ENSNSUG00000017064) #18 ATXN1 (ENSNSUG00000017067) #19 RBM24 (ENSNSUG00000017071) #21 CAP2 (ENSNSUG00000017075) #22 FAM8A1 (ENSNSUG00000017088) #23 NUP153 (ENSNSUG00000017089) #24 ENSNSUG00000017092 PAK1IP1 (ENSNSUG00000017093) ENSNSUG00000017094 ENSNSUG00000017095 ENSNSUG00000017096 #8 TBC1D7 (ENSNSUG00000017097) #7 PHACTR1 (ENSNSUG00000017098) ENSNSUG00000017099 ENSNSUG00000017101 EDN1 (ENSNSUG00000017102) HIVEP1 (ENSNSUG00000017103) ADTRP (ENSNSUG00000017104) TMEM170B (ENSNSUG00000017105) Indian cobra MODERN SPECIES 2 KDM1B (ENSNNAG00000013234) #27 TPMT (ENSNNAG00000013216) #26 KIF13A (ENSNNAG00000012945) #25 SIRT5 (ENSNNAG00000012911) #9 NOL7 (ENSNNAG00000012873) #10 RANBP9 (ENSNNAG00000012836) #11 MCUR1 (ENSNNAG00000012777) #12 RNF182 (ENSNNAG00000012764) #13 CD83 (ENSNNAG00000012743) #14 JARID2 (ENSNNAG00000012708) #15 DTNBP1 (ENSNNAG00000012679) #16 MYLIP (ENSNNAG00000012652) #17 GMPR (ENSNNAG00000012634) #18 ATXN1 (ENSNNAG00000012624) #19 RBM24 (ENSNNAG00000012595) #21 CAP2 (ENSNNAG00000012565) #22 FAM8A1 (ENSNNAG00000012509) #23 NUP153 (ENSNNAG00000012425) #24 ENSNNAG00000012350 PAK1IP1 (ENSNNAG00000012291) TMEM14C (ENSNNAG00000012279) GFOD1 (ENSNNAG00000012265) #8 TBC1D7 (ENSNNAG00000012237) #7 PHACTR1 (ENSNNAG00000012201) EDN1 (ENSNNAG00000012158) ENSNNAG00000012136 ADTRP (ENSNNAG00000012066) TMEM170B (ENSNNAG00000012050) NEDD9 (ENSNNAG00000012036) ENSNNAG00000011990 ENSNNAG00000011977 tuatara MODERN SPECIES 421 JARID2 (ENSSPUG00000016599) #15 DTNBP1 (ENSSPUG00000016619) #16 MYLIP (ENSSPUG00000016632) #17 GMPR (ENSSPUG00000016642) #18 ATXN1 (ENSSPUG00000016650) #19 ENSSPUG00000016661 RBM24 (ENSSPUG00000016665) #21 CAP2 (ENSSPUG00000016671) #22 FAM8A1 (ENSSPUG00000016683) #23 NUP153 (ENSSPUG00000016687) #24 ENSSPUG00000016701 PAK1IP1 (ENSSPUG00000016718) ENSSPUG00000000011 ADTRP (ENSSPUG00000000021) ENSSPUG00000000104 ENSSPUG00000000107 ENSSPUG00000000115 EDN1 (ENSSPUG00000000119) PHACTR1 (ENSSPUG00000000155) TBC1D7 (ENSSPUG00000000199) #7 ENSSPUG00000000222 #8 ENSSPUG00000000228 #8 ENSSPUG00000000238 Archelosauria ANCESTRAL SPECIES 5 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 Archosauria ANCESTRAL SPECIES ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b Aves ANCESTRAL SPECIES 24 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Neognathae ANCESTRAL SPECIES ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Galloanserae ANCESTRAL SPECIES ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Anatidae ANCESTRAL SPECIES 1 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000156325 ENSGT00950000183199.b ENSGT00390000000706 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00940000157738 ENSGT00940000155013 ENSGT00940000154774 Duck MODERN SPECIES 10 NHLRC1 (ENSAPLG00000021634) KIF13A (ENSAPLG00000005320) #25 SIRT5 (ENSAPLG00000005125) #9 NOL7 (ENSAPLG00000005122) #10 RANBP9 (ENSAPLG00000004706) #11 ENSAPLG00000030801 #12 RNF182 (ENSAPLG00000001505) #13 CD83 (ENSAPLG00000020318) #14 JARID2 (ENSAPLG00000004296) #15 DTNBP1 (ENSAPLG00000013450) #16 ENSAPLG00000025659 MYLIP (ENSAPLG00000008040) #17 GMPR (ENSAPLG00000007973) #18 ATXN1 (ENSAPLG00000029862) #19 RBM24 (ENSAPLG00000007828) #21 CAP2 (ENSAPLG00000007343) #22 FAM8A1 (ENSAPLG00000020765) #23 PAK1IP1 (ENSAPLG00000005241) ENSAPLG00000005452 NFX1 (ENSAPLG00000005524) ENSAPLG00000027178 HUS1 (ENSAPLG00000006454) TNS3 (ENSAPLG00000006520) IGFBP3 (ENSAPLG00000016379) IGFBP1 (ENSAPLG00000025569) ADCY1 (ENSAPLG00000001037) RAMP3 (ENSAPLG00000023187) PDIA4 (ENSAPLG00000010645) EZH2 (ENSAPLG00000010543) CUL1 (ENSAPLG00000010478) CNTNAP2 (ENSAPLG00000010463) Phasianidae ANCESTRAL SPECIES 1 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Japanese quail MODERN SPECIES 11 TPMT (ENSCJPG00005017918) #26 NHLRC1 (ENSCJPG00005017917) KIF13A (ENSCJPG00005017304) #25 SIRT5 (ENSCJPG00005017301) #9 NOL7 (ENSCJPG00005017300) #10 RANBP9 (ENSCJPG00005017299) #11 MCUR1 (ENSCJPG00005017293) #12 RNF182 (ENSCJPG00005017292) #13 CD83 (ENSCJPG00005017291) #14 JARID2 (ENSCJPG00005017206) #15 DTNBP1 (ENSCJPG00005017199) #16 MYLIP (ENSCJPG00005017194) #17 GMPR (ENSCJPG00005017192) #18 ATXN1 (ENSCJPG00005017189) #19 RBM24 (ENSCJPG00005017182) #21 CAP2 (ENSCJPG00005017175) #22 FAM8A1 (ENSCJPG00005017173) #23 ENSCJPG00005017122 PAK1IP1 (ENSCJPG00005017121) ENSCJPG00005017119 GFOD1 (ENSCJPG00005017118) #8 TBC1D7 (ENSCJPG00005017117) #7 PHACTR1 (ENSCJPG00005017104) EDN1 (ENSCJPG00005017097) HIVEP1 (ENSCJPG00005017096) ADTRP (ENSCJPG00005017095) TMEM170B (ENSCJPG00005017093) NEDD9 (ENSCJPG00005017092) SMIM13 (ENSCJPG00005017091) ELOVL2 (ENSCJPG00005017084) SYCP2L (ENSCJPG00005017081) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00980000198798 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 Turkey MODERN SPECIES 22 ENSMGAG00000021430 KIF13A (ENSMGAG00000002694) #25 SIRT5 (ENSMGAG00000002761) #9 NOL7 (ENSMGAG00000022526) #10 RANBP9 (ENSMGAG00000002794) #11 MCUR1 (ENSMGAG00000002843) #12 ENSMGAG00000015403 #13 CD83 (ENSMGAG00000021035) #14 ENSMGAG00000019716 JARID2 (ENSMGAG00000002863) #15 DTNBP1 (ENSMGAG00000002924) #16 MYLIP (ENSMGAG00000002958) #17 GMPR (ENSMGAG00000002994) #18 ATXN1 (ENSMGAG00000003028) #19 RBM24 (ENSMGAG00000003056) #21 CAP2 (ENSMGAG00000003075) #22 FAM8A1 (ENSMGAG00000003129) #23 NUP153 (ENSMGAG00000003139) #24 ENSMGAG00000003234 ENSMGAG00000003254 ENSMGAG00000019867 GFOD1 (ENSMGAG00000022487) #8 TBC1D7 (ENSMGAG00000003289) #7 PHACTR1 (ENSMGAG00000003339) ENSMGAG00000016793 EDN1 (ENSMGAG00000019336) HIVEP1 (ENSMGAG00000003391) ADTRP (ENSMGAG00000022439) TMEM170B (ENSMGAG00000019401) NEDD9 (ENSMGAG00000003409) SMIM13 (ENSMGAG00000021204) Golden eagle MODERN SPECIES 9 TPMT (ENSACCG00020014494) #26 NHLRC1 (ENSACCG00020014482) KIF13A (ENSACCG00020014342) #25 SIRT5 (ENSACCG00020014236) #9 NOL7 (ENSACCG00020014211) #10 RANBP9 (ENSACCG00020014136) #11 MCUR1 (ENSACCG00020014058) #12 RNF182 (ENSACCG00020014039) #13 CD83 (ENSACCG00020013980) #14 JARID2 (ENSACCG00020013959) #15 DTNBP1 (ENSACCG00020013929) #16 MYLIP (ENSACCG00020013896) #17 GMPR (ENSACCG00020013876) #18 ATXN1 (ENSACCG00020013862) #19 RBM24 (ENSACCG00020013851) #21 CAP2 (ENSACCG00020013826) #22 FAM8A1 (ENSACCG00020013810) #23 NUP153 (ENSACCG00020013786) #24 ENSACCG00020013760 PAK1IP1 (ENSACCG00020013737) ENSACCG00020013724 GFOD1 (ENSACCG00020013716) #8 TBC1D7 (ENSACCG00020013697) #7 PHACTR1 (ENSACCG00020013628) EDN1 (ENSACCG00020013534) HIVEP1 (ENSACCG00020013457) ADTRP (ENSACCG00020013386) TMEM170B (ENSACCG00020013331) NEDD9 (ENSACCG00020013313) SMIM13 (ENSACCG00020013287) ELOVL2 (ENSACCG00020013274) Kakapo MODERN SPECIES TPMT (ENSSHBG00005015603) #26 NHLRC1 (ENSSHBG00005015600) KIF13A (ENSSHBG00005009900) #25 SIRT5 (ENSSHBG00005009586) #9 NOL7 (ENSSHBG00005009583) #10 RANBP9 (ENSSHBG00005009513) #11 MCUR1 (ENSSHBG00005009491) #12 RNF182 (ENSSHBG00005009476) #13 ENSSHBG00005009456 #14 JARID2 (ENSSHBG00005009450) #15 DTNBP1 (ENSSHBG00005009437) #16 MYLIP (ENSSHBG00005009430) #17 GMPR (ENSSHBG00005009425) #18 ATXN1 (ENSSHBG00005009401) #19 RBM24 (ENSSHBG00005009391) #21 CAP2 (ENSSHBG00005009380) #22 FAM8A1 (ENSSHBG00005009373) #23 NUP153 (ENSSHBG00005009296) #24 ENSSHBG00005009263 PAK1IP1 (ENSSHBG00005009249) ENSSHBG00005009242 GFOD1 (ENSSHBG00005009238) #8 TBC1D7 (ENSSHBG00005009229) #7 PHACTR1 (ENSSHBG00005009218) EDN1 (ENSSHBG00005009196) HIVEP1 (ENSSHBG00005009188) ADTRP (ENSSHBG00005009125) TMEM170B (ENSSHBG00005009105) NEDD9 (ENSSHBG00005009100) SMIM13 (ENSSHBG00005009095) ELOVL2 (ENSSHBG00005009094) Passeriformes_d ANCESTRAL SPECIES ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 ENSGT01050000244838.C.a Passeroidea ANCESTRAL SPECIES 2 ENSGT00390000016823 #26 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000156139.`b ENSGT00390000001263 ENSGT00940000154772.c.b ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 ENSGT01050000244838.C.a Common canary MODERN SPECIES ENSSCAG00000000290 ENSSCAG00000000299 ENSSCAG00000000306 ENSSCAG00000000312 ENSSCAG00000000319 ENSSCAG00000000328 ENSSCAG00000000333 ENSSCAG00000000346 CD83 (ENSSCAG00000000351) #14 JARID2 (ENSSCAG00000000433) #15 DTNBP1 (ENSSCAG00000000458) #16 MYLIP (ENSSCAG00000000472) #17 GMPR (ENSSCAG00000000487) #18 ATXN1 (ENSSCAG00000000507) #19 RBM24 (ENSSCAG00000000562) #21 CAP2 (ENSSCAG00000000568) #22 FAM8A1 (ENSSCAG00000000576) #23 NUP153 (ENSSCAG00000000585) #24 ENSSCAG00000000619 PAK1IP1 (ENSSCAG00000000637) ENSSCAG00000000646 GFOD1 (ENSSCAG00000000653) #8 TBC1D7 (ENSSCAG00000000658) #7 ENSSCAG00000000664 ENSSCAG00000000690 EDN1 (ENSSCAG00000000710) HIVEP1 (ENSSCAG00000000719) ADTRP (ENSSCAG00000000807) TMEM170B (ENSSCAG00000000818) NEDD9 (ENSSCAG00000000848) SMIM13 (ENSSCAG00000000852) Medium ground finch MODERN SPECIES 28 TPMT (ENSGFOG00000006597) #26 NHLRC1 (ENSGFOG00000006607) KIF13A (ENSGFOG00000006617) #25 SIRT5 (ENSGFOG00000006666) #9 NOL7 (ENSGFOG00000006673) #10 RANBP9 (ENSGFOG00000006683) #11 MCUR1 (ENSGFOG00000006722) #12 RNF182 (ENSGFOG00000006746) #13 CD83 (ENSGFOG00000006757) #14 JARID2 (ENSGFOG00000006810) #15 DTNBP1 (ENSGFOG00000006828) #16 MYLIP (ENSGFOG00000006835) #17 GMPR (ENSGFOG00000006850) #18 ATXN1 (ENSGFOG00000006865) #19 RBM24 (ENSGFOG00000006871) #21 CAP2 (ENSGFOG00000006878) #22 FAM8A1 (ENSGFOG00000006894) #23 NUP153 (ENSGFOG00000006903) #24 ENSGFOG00000006924 PAK1IP1 (ENSGFOG00000006963) ENSGFOG00000006996 GFOD1 (ENSGFOG00000007005) #8 TBC1D7 (ENSGFOG00000007014) #7 PHACTR1 (ENSGFOG00000007035) EDN1 (ENSGFOG00000007055) HIVEP1 (ENSGFOG00000007063) Australian saltwater crocodile MODERN SPECIES TPMT (ENSCPRG00005003237) #26 NHLRC1 (ENSCPRG00005003235) ENSCPRG00005003103 #25 ENSCPRG00005002967 #25 SIRT5 (ENSCPRG00005002889) #9 RANBP9 (ENSCPRG00005002842) #11 MCUR1 (ENSCPRG00005002821) #12 RNF182 (ENSCPRG00005002819) #13 CD83 (ENSCPRG00005002774) #14 JARID2 (ENSCPRG00005002743) #15 DTNBP1 (ENSCPRG00005002695) #16 MYLIP (ENSCPRG00005002600) #17 GMPR (ENSCPRG00005002582) #18 ATXN1 (ENSCPRG00005002568) #19 RBM24 (ENSCPRG00005002516) #21 CAP2 (ENSCPRG00005002496) #22 FAM8A1 (ENSCPRG00005002491) #23 NUP153 (ENSCPRG00005002329) #24 ENSCPRG00005002293 PAK1IP1 (ENSCPRG00005002291) TMEM14C (ENSCPRG00005002288) GFOD1 (ENSCPRG00005002268) #8 TBC1D7 (ENSCPRG00005002259) #7 PHACTR1 (ENSCPRG00005002247) ENSCPRG00005002201 EDN1 (ENSCPRG00005002166) HIVEP1 (ENSCPRG00005002163) ADTRP (ENSCPRG00005002115) TMEM170B (ENSCPRG00005002077) NEDD9 (ENSCPRG00005002026) SMIM13 (ENSCPRG00005002021) Cryptodira ANCESTRAL SPECIES 7 ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000166060 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b Emydidae ANCESTRAL SPECIES ENSGT00730000111361 ENSGT00940000157508 #25 ENSGT00940000156080 #9 ENSGT00390000004118 #10 ENSGT00940000157305 #11 ENSGT00940000158957 #12 ENSGT00730000111020.b.a #13 ENSGT00390000007302 #14 ENSGT00940000159220 #15 ENSGT00940000156479.a #16 ENSGT00940000156206 #17 ENSGT00940000156595 #18 ENSGT00390000005939.a.a #19 ENSGT00950000185255 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000163315 ENSGT00390000001263 ENSGT00940000154772.d ENSGT00940000160837 #8 ENSGT00390000009122 #7 ENSGT00940000155842 ENSGT00530000066138 ENSGT00950000183053.D ENSGT00940000158242 ENSGT00940000158284 ENSGT00940000160424 ENSGT00950000183008.a.a.a.b ENSGT00560000078630 painted turtle MODERN SPECIES 2427 ENSCPBG00000008282 RBM24 (ENSCPBG00000008291) #21 CAP2 (ENSCPBG00000008300) #22 FAM8A1 (ENSCPBG00000008314) #23 NUP153 (ENSCPBG00000008333) #24 ENSCPBG00000008371 PAK1IP1 (ENSCPBG00000008378) TMEM14C (ENSCPBG00000008393) GFOD1 (ENSCPBG00000008401) #8 TBC1D7 (ENSCPBG00000008406) #7 PHACTR1 (ENSCPBG00000008420) EDN1 (ENSCPBG00000008452) HIVEP1 (ENSCPBG00000008457) ADTRP (ENSCPBG00000008466) TMEM170B (ENSCPBG00000008471) NEDD9 (ENSCPBG00000008477) SMIM13 (ENSCPBG00000008487) ENSCPBG00000008492 Three-toed box turtle MODERN SPECIES 24 KIF13A (ENSTMTG00000000783) #25 SIRT5 (ENSTMTG00000000761) #9 NOL7 (ENSTMTG00000000725) #10 RANBP9 (ENSTMTG00000000712) #11 MCUR1 (ENSTMTG00000000666) #12 RNF182 (ENSTMTG00000000634) #13 CD83 (ENSTMTG00000000619) #14 JARID2 (ENSTMTG00000000542) #15 DTNBP1 (ENSTMTG00000000497) #16 ENSTMTG00000000475 MYLIP (ENSTMTG00000000459) #17 GMPR (ENSTMTG00000000442) #18 ATXN1 (ENSTMTG00000000423) #19 ENSTMTG00000000401 RBM24 (ENSTMTG00000000383) #21 CAP2 (ENSTMTG00000000349) #22 FAM8A1 (ENSTMTG00000000323) #23 NUP153 (ENSTMTG00000000280) #24 ENSTMTG00000000233 PAK1IP1 (ENSTMTG00000000217) TMEM14C (ENSTMTG00000000196) GFOD1 (ENSTMTG00000000171) #8 TBC1D7 (ENSTMTG00000000148) #7 PHACTR1 (ENSTMTG00000000094) ENSTMTG00000014451 EDN1 (ENSTMTG00000014425) HIVEP1 (ENSTMTG00000014406) ADTRP (ENSTMTG00000014394) TMEM170B (ENSTMTG00000014382) NEDD9 (ENSTMTG00000014353) SMIM13 (ENSTMTG00000014343) Abingdon island giant tortoise MODERN SPECIES 2468 ATXN1 (ENSCABG00000005586) #19 ENSCABG00000005592 RBM24 (ENSCABG00000005598) #21 CAP2 (ENSCABG00000005601) #22 FAM8A1 (ENSCABG00000005603) #23 NUP153 (ENSCABG00000005639) #24 ENSCABG00000006965 PAK1IP1 (ENSCABG00000006969) TMEM14C (ENSCABG00000006974) ENSCABG00000006977 #8 SMAD3 (ENSCABG00000006979) AAGAB (ENSCABG00000006983) IQCH (ENSCABG00000006989) C15orf61 (ENSCABG00000007006) MAP2K5 (ENSCABG00000007008) SKOR1 (ENSCABG00000007009) PIAS1 (ENSCABG00000007017) CALML4 (ENSCABG00000007026) CLN6 (ENSCABG00000007043) Chinese turtle MODERN SPECIES 2035 MYLIP (ENSPSIG00000008581) #17 GMPR (ENSPSIG00000007264) #18 ATXN1 (ENSPSIG00000007158) #19 ENSPSIG00000000052 RBM24 (ENSPSIG00000006920) #21 CAP2 (ENSPSIG00000006268) #22 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000017716 ENSLLEG00000017682 RNF182 (ENSLLEG00000017631) #13 ENSLLEG00000017565 JARID2 (ENSLLEG00000016035) #15 ENSLLEG00000015962 ENSLLEG00000015803 #16 ENSLLEG00000015763 MYLIP (ENSLLEG00000015627) #17 GMPR (ENSLLEG00000015514) #18 ATXN1 (ENSLLEG00000015480) #19 STMND1 (ENSLLEG00000015427) #20 ENSLLEG00000015399 ENSLLEG00000015327 RBM24 (ENSLLEG00000015207) #21 CAP2 (ENSLLEG00000014923) #22 FAM8A1 (ENSLLEG00000014852) #23 NUP153 (ENSLLEG00000014556) #24 KIF13A (ENSLLEG00000013551) #25 NHLRC1 (ENSLLEG00000013427) ENSLLEG00000013409 ENSLLEG00000013392 TPMT (ENSLLEG00000013324) #26 KDM1B (ENSLLEG00000013113) #27 DEK (ENSLLEG00000012970) #28 ENSLLEG00000012912 RNF144B (ENSLLEG00000012805) #29 ENSLLEG00000012767 ENSLLEG00000012749 ENSLLEG00000012734 ID4 (ENSLLEG00000012696) #30 Actinopterygii ANCESTRAL SPECIES 259 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245 #21 ENSGT00390000017955.d #22 ENSGT00390000007346 #23 ENSGT00940000153253.a #24 ENSGT00940000157508 #25 ENSGT00730000111361 ENSGT00390000016823 #26 ENSGT00390000009988 ENSGT00940000159377 ENSGT00530000063877.b ENSGT00940000161470.a.b #35 ENSGT00940000161470.a.a #35 ENSGT00940000155952 #33 ENSGT00940000155115.a.a #32 ENSGT01030000234564.a.a.a.a.a #31 Osteoglossocephalai ANCESTRAL SPECIES 51 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000157508 #25 ENSGT00940000153253.a #24 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245.a.b #21 ENSGT01030000236049 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00520000055666.b ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00510000049601 ENSGT00940000154807.a.b.b ENSGT00940000154896 ENSGT00940000158906.j ENSGT00390000018531 ENSGT00390000000118 ENSGT00940000155602 ENSGT00800000125328 Otomorpha ANCESTRAL SPECIES 381 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b Clupeiformes ANCESTRAL SPECIES 259 ENSGT00390000005125 ENSGT00940000154368.s ENSGT00940000155909.o.b ENSGT01050000244970.a ENSGT00390000000698 ENSGT00940000163854.a.b ENSGT00940000162345.c.b ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b Atlantic herring MODERN SPECIES 10 ENSCHAG00000001177 ENSCHAG00000001316 ENSCHAG00000001615 ENSCHAG00000001668 psmb4 (ENSCHAG00000001693) pogza (ENSCHAG00000001705) zgc:153441 (ENSCHAG00000001786) gatad1 (ENSCHAG00000001814) ENSCHAG00000001849 lrrc14b (ENSCHAG00000001886) uqcrb (ENSCHAG00000001897) mterf3 (ENSCHAG00000001917) PTDSS1 (ENSCHAG00000001938) nup153 (ENSCHAG00000002183) #24 rbm24a (ENSCHAG00000002264) #21 cap2 (ENSCHAG00000002333) #22 ENSCHAG00000005157 vps28 (ENSCHAG00000005166) mapk15 (ENSCHAG00000005218) grinaa (ENSCHAG00000005418) ENSCHAG00000005435 ENSCHAG00000005456 slc9a1b (ENSCHAG00000005488) ENSCHAG00000006814 ENSCHAG00000006845 KDM1B (ENSCHAG00000007035) #27 lgals17 (ENSCHAG00000008993) VPS52 (ENSCHAG00000009038) rps18 (ENSCHAG00000010082) RING1 (ENSCHAG00000010131) ENSCHAG00000010162 Characiphysae_b ANCESTRAL SPECIES 1 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00940000154655.a.i.b ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000176888 ENSGT01030000235077 ENSGT00530000063721.A ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 #26 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 Characoidei ANCESTRAL SPECIES 3 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00940000154655.a.i.b ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000176888 ENSGT01030000235077 ENSGT00530000063721.A ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984 ENSGT00940000158117 ENSGT00390000016823 #26 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 Electric eel MODERN SPECIES 536 trps1 (ENSEEEG00000016185) eif3hb (ENSEEEG00000016164) utp23 (ENSEEEG00000016160) ENSEEEG00000016157 krit1 (ENSEEEG00000016144) nup153 (ENSEEEG00000016132) #24 PTDSS1 (ENSEEEG00000016130) ENSEEEG00000016129 rbm24a (ENSEEEG00000016128) #21 cap2 (ENSEEEG00000015833) #22 ENSEEEG00000015821 vps28 (ENSEEEG00000015808) mapk15 (ENSEEEG00000015805) grinaa (ENSEEEG00000015803) RPRD1A (ENSEEEG00000015800) ENSEEEG00000015796 Channel catfish MODERN SPECIES 16 ENSIPUG00000013674 UQCRB (ENSIPUG00000014095) mterf3 (ENSIPUG00000014124) rad21 (ENSIPUG00000014132) CSMD3 (ENSIPUG00000014167) trps1 (ENSIPUG00000014341) eif3h (ENSIPUG00000014407) utp23 (ENSIPUG00000014437) ENSIPUG00000014441 ENSIPUG00000014444 krit1 (ENSIPUG00000014463) nup153 (ENSIPUG00000014605) #24 ptdss1 (ENSIPUG00000014670) ENSIPUG00000014708 rbm24 (ENSIPUG00000014727) #21 cap2 (ENSIPUG00000014740) #22 vps28 (ENSIPUG00000014813) mapk15 (ENSIPUG00000014928) GRINA (ENSIPUG00000014961) Rprd1a (ENSIPUG00000014993) slc30a8 (ENSIPUG00000015011) med30 (ENSIPUG00000015040) extl1 (ENSIPUG00000015076) SAMD12 (ENSIPUG00000015123) abrab (ENSIPUG00000015143) angpt1 (ENSIPUG00000015155) sdc2 (ENSIPUG00000015186) ppp1r36 (ENSIPUG00000015238) tpmt (ENSIPUG00000015258) #26 ext1c (ENSIPUG00000015279) zgc:114119 (ENSIPUG00000015310) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00940000154655.a.i.b ENSGT00940000155549.a.a.b ENSGT00940000157893 ENSGT00730000111042 ENSGT00940000153117.A ENSGT00940000176888 ENSGT01030000235077 ENSGT00530000063721.A ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT01030000234597.a.b.b.e.a.b #20 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT01010000223133 ENSGT00390000007486 ENSGT00940000159758.c ENSGT01050000244890.a.a.a.g ENSGT00950000183094.b.b ENSGT00940000160706 ENSGT00390000010887.a ENSGT00940000155321.e ENSGT00390000008161.a.b ENSGT00390000015984.l.a ENSGT00940000158117 ENSGT00390000016823 #26 ENSGT00940000163960.a ENSGT00390000010887.b ENSGT00390000013601 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 75 ENSGT00940000153117.A.v ENSGT01030000235077.b ENSGT00530000063721.A.f ENSGT00940000153253.a.b #24 ENSGT00530000063576.B.a.b.d ENSGT01030000234597.a.b.b.e.a.b.a #20 ENSGT00940000156245.a.b.a.b #21 ENSGT00390000017955.d.e #22 ENSGT00390000007486.a ENSGT00940000159758.c ENSGT01050000244890.a.a.a.g.a ENSGT01050000244890.a.a.a.g.b ENSGT00950000183094.b.b ENSGT00940000160706.c ENSGT00390000010887.a.h ENSGT00940000155321.e.a.b ENSGT00390000008161.a.b.f ENSGT00390000015984.l.b ENSGT00940000158117.m.a.a ENSGT00940000160706.d ENSGT00390000010887.a.g ENSGT00940000155321.e.a.a ENSGT00390000008161.a.b.e Cyprininae_a ANCESTRAL SPECIES 516 ENSGT00940000153117.A.v ENSGT01030000235077.b ENSGT00530000063721.A.f ENSGT00940000153253.a.b #24 ENSGT00530000063576.B.a.b.d ENSGT01030000234597.a.b.b.e.a.b.a #20 ENSGT00940000156245.a.b.a.a.a #21 ENSGT00390000017955.d.e #22 ENSGT00390000007486.a ENSGT00940000159758.c ENSGT01050000244890.a.a.a.g.a ENSGT01050000244890.a.a.a.g.b ENSGT00460000042249.b ENSGT00950000183094.b.b Common carp reference MODERN SPECIES 31 lypla2 (ENSCCRG00000058275) ankib1a (ENSCCRG00000043360) ENSCCRG00000081238 lrrc14b (ENSCCRG00000043339) uqcrb (ENSCCRG00000076213) rad21b (ENSCCRG00000075006) CSMD3 (ENSCCRG00000043191) trps1 (ENSCCRG00000047454) eif3hb (ENSCCRG00000039076) ENSCCRG00000030922 krit1 (ENSCCRG00000029048) nup153 (ENSCCRG00000039146) #24 ENSCCRG00000039158 STMND1 (ENSCCRG00000039195) #20 rbm24a (ENSCCRG00000072393) #21 cap2 (ENSCCRG00000037743) #22 vps28 (ENSCCRG00000037692) mapk15 (ENSCCRG00000046389) grinaa (ENSCCRG00000046384) ENSCCRG00000069743 SLC30A8 (ENSCCRG00000020519) med30 (ENSCCRG00000025951) ext1b (ENSCCRG00000005441) SAMD12 (ENSCCRG00000040022) ENSCCRG00000040028 angpt1 (ENSCCRG00000053660) sdc2 (ENSCCRG00000026164) ENSCCRG00000022073 #26 ENSCCRG00000043189 zgc:114119 (ENSCCRG00000071732) NCDN (ENSCCRG00000043194) Cyprininae ANCESTRAL SPECIES 59 ENSGT00940000155549.a.a.b.p.b ENSGT00940000155549.a.a.b.q ENSGT00940000155299.A.t ENSGT00940000166312.b.b ENSGT00940000155549.b ENSGT00940000157893.g ENSGT00730000111042.ab ENSGT00940000153117.A.w ENSGT00940000176888 ENSGT01030000235077.a ENSGT00530000063721.A.e ENSGT00940000153253.a.a #24 ENSGT00530000063576.B.a.b.c ENSGT01030000234597.a.b.b.e.a.b.b #20 ENSGT00940000156245.a.b.b #21 ENSGT00390000017955.d.f #22 ENSGT01010000223133 ENSGT00390000007486.b Goldfish MODERN SPECIES 10 uqcrb (ENSCARG00000026439) mterf3 (ENSCARG00000026429) rad21b (ENSCARG00000026371) CSMD3 (ENSCARG00000026227) ENSCARG00000026196 trps1 (ENSCARG00000026187) ENSCARG00000026182 eif3hb (ENSCARG00000026074) utp23 (ENSCARG00000026050) ENSCARG00000026033 krit1 (ENSCARG00000025208) nup153 (ENSCARG00000025060) #24 PTDSS1 (ENSCARG00000024991) STMND1 (ENSCARG00000024985) #20 rbm24a (ENSCARG00000024974) #21 cap2 (ENSCARG00000024096) #22 ENSCARG00000024069 vps28 (ENSCARG00000024036) ENSCARG00000015507 ENSCARG00000015504 mapk15 (ENSCARG00000015469) ENSCARG00000015454 RPRD1A (ENSCARG00000015445) SLC30A8 (ENSCARG00000015412) med30 (ENSCARG00000015403) ext1b (ENSCARG00000015367) SAMD12 (ENSCARG00000015359) abrab (ENSCARG00000015352) angpt1 (ENSCARG00000015243) sdc2 (ENSCARG00000015210) ENSCARG00000015143 #26 Euteleosteomorpha ANCESTRAL SPECIES 47 ENSGT00940000162732 ENSGT00940000157683 ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT01030000236049 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b ENSGT00940000154107.b Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000156032.`b.b.a.a ENSGT00940000159344 ENSGT00940000162732 ENSGT00940000157683.e ENSGT00940000159188 ENSGT00940000155239 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00980000200411 ENSGT00950000183094.b.b ENSGT00940000170761 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000165648 ENSGT00940000160023 ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f ENSGT00940000155620.q ENSGT00940000158230.b.b ENSGT00940000160242.b Huchen MODERN SPECIES 1070 SLC25A13 (ENSHHUG00000015829) sem1 (ENSHHUG00000015852) dlx6a (ENSHHUG00000015854) dlx5a (ENSHHUG00000015871) ago2 (ENSHHUG00000015896) ENSHHUG00000016733 gatad1 (ENSHHUG00000016752) ENSHHUG00000016760 mterf3 (ENSHHUG00000016775) ENSHHUG00000016824 ENSHHUG00000016831 nup153 (ENSHHUG00000016837) #24 ENSHHUG00000016863 ENSHHUG00000016866 rbm24a (ENSHHUG00000016878) #21 cap2 (ENSHHUG00000016881) #22 vps28 (ENSHHUG00000016904) mapk15 (ENSHHUG00000016912) River trout MODERN SPECIES 29 ENSSTUG00000043271 DYNC1I1 (ENSSTUG00000043258) SLC25A13 (ENSSTUG00000041454) sem1 (ENSSTUG00000041359) dlx6a (ENSSTUG00000041323) dlx5a (ENSSTUG00000041310) ago2 (ENSSTUG00000040765) chrac1 (ENSSTUG00000040730) gatad1 (ENSSTUG00000040699) ENSSTUG00000040672 mterf3 (ENSSTUG00000040496) PTDSS1 (ENSSTUG00000040457) nup153 (ENSSTUG00000040354) #24 ENSSTUG00000040346 rbm24a (ENSSTUG00000040340) #21 cap2 (ENSSTUG00000040142) #22 vps28 (ENSSTUG00000040131) mapk15 (ENSSTUG00000040114) grinaa (ENSSTUG00000040092) ENSSTUG00000040085 RPRD1A (ENSSTUG00000040062) nfyc (ENSSTUG00000039513) KCNQ4 (ENSSTUG00000039438) TINAGL1 (ENSSTUG00000039412) lim2.5 (ENSSTUG00000039396) ENSSTUG00000039222 ENSSTUG00000039177 ZNF385D (ENSSTUG00000039168) kat2b (ENSSTUG00000037743) RAB5A (ENSSTUG00000037684) ENSSTUG00000037654 Atlantic salmon MODERN SPECIES 5 PPP1R9A (ENSSSAG00000053010) pdk4 (ENSSSAG00000053275) DYNC1I1 (ENSSSAG00000054789) SLC25A13 (ENSSSAG00000055623) dlx6a (ENSSSAG00000100413) dlx5a (ENSSSAG00000083966) ago2 (ENSSSAG00000057049) chrac1 (ENSSSAG00000082680) ENSSSAG00000057845 ENSSSAG00000093638 ENSSSAG00000057888 ENSSSAG00000047545 ENSSSAG00000058134 #24 ENSSSAG00000058158 ENSSSAG00000102627 cap2 (ENSSSAG00000058188) #22 mapk15 (ENSSSAG00000058382) grinaa (ENSSSAG00000058399) ENSSSAG00000058405 ENSSSAG00000058408 nfyc (ENSSSAG00000058435) ENSSSAG00000058562 ENSSSAG00000058648 ENSSSAG00000098149 UBQL4 (ENSSSAG00000058719) ENSSSAG00000099987 ENSSSAG00000058816 ENSSSAG00000103521 ENSSSAG00000058826 ENSSSAG00000058839 ENSSSAG00000113896 Salmoninae ANCESTRAL SPECIES 48 ENSGT00940000159188.j ENSGT00940000155239.e ENSGT00940000166127.c ENSGT00390000018554.f.a ENSGT00940000159541 ENSGT00940000165985.e ENSGT00940000161455 ENSGT00440000033589.d.b.d ENSGT01030000234531.C ENSGT00390000012916 ENSGT00940000173300 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d #24 ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c #21 ENSGT00390000017955.d.h #22 ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT01030000234597.b.b.b.a.a.b ##20 ENSGT00940000162732.b ENSGT00940000157683.e.a ENSGT00940000159188.j ENSGT00940000155239.e ENSGT00940000166127.c ENSGT00390000018554.f.a ENSGT00440000033589.d.b.d ENSGT01030000234531.C ENSGT00390000012916 ENSGT00940000173300 ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d #24 ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c #21 ENSGT00390000017955.d.h #22 ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b.a ENSGT00940000154107.b ENSGT00940000154995.eb Chinook salmon MODERN SPECIES 4 ENSOTSG00005004823 ##20 sem1 (ENSOTSG00005004824) dlx6a (ENSOTSG00005004826) dlx5a (ENSOTSG00005004827) ago2 (ENSOTSG00005004840) chrac1 (ENSOTSG00005006015) gatad1 (ENSOTSG00005006018) ENSOTSG00005006027 ENSOTSG00005006029 lrrc14b (ENSOTSG00005006030) uqcrb (ENSOTSG00005006032) ENSOTSG00005006033 PTDSS1 (ENSOTSG00005006039) nup153 (ENSOTSG00005006057) #24 ENSOTSG00005006058 cap2 (ENSOTSG00005006060) #22 ENSOTSG00005006061 vps28 (ENSOTSG00005006062) mapk15 (ENSOTSG00005006065) grinaa (ENSOTSG00005006069) ENSOTSG00005006070 ENSOTSG00005006071 nfyc (ENSOTSG00005006077) KCNQ4 (ENSOTSG00005006141) TINAGL1 (ENSOTSG00005006145) lim2.5 (ENSOTSG00005006155) ENSOTSG00005006156 rab25a (ENSOTSG00005006201) ENSOTSG00005006202 ENSOTSG00005006203 ENSOTSG00005006204 Rainbow trout MODERN SPECIES 9 ENSOMYG00000075845 ENSOMYG00000066585 dlx6a (ENSOMYG00000008153) dlx5a (ENSOMYG00000008113) ago2 (ENSOMYG00000007677) chrc1 (ENSOMYG00000007244) gatad1 (ENSOMYG00000007218) ENSOMYG00000007184 lrrc14b (ENSOMYG00000007172) ENSOMYG00000060217 uqcrb (ENSOMYG00000007126) ENSOMYG00000007068 ENSOMYG00000006993 #24 ENSOMYG00000066338 rbm24a (ENSOMYG00000049823) #21 cap2 (ENSOMYG00000006398) #22 ENSOMYG00000005833 vps28 (ENSOMYG00000005826) mapk15 (ENSOMYG00000005633) grinaa (ENSOMYG00000015429) ENSOMYG00000015422 ENSOMYG00000015419 ENSOMYG00000015348 ENSOMYG00000026008 ENSOMYG00000015328 ENSOMYG00000015315 ENSOMYG00000015306 ENSOMYG00000015206 ENSOMYG00000015161 ENSOMYG00000075706 ENSOMYG00000077447 Salmo ANCESTRAL SPECIES 2 ENSGT00940000159344.k ENSGT00940000162732.b ENSGT00940000157683.e.a ENSGT00940000159188.j ENSGT00940000155239.e ENSGT00940000166127.c ENSGT00390000018554.f.a ENSGT00440000033589.d.b.d ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801.d ENSGT00530000063576.B.a.b.a ENSGT00940000153253.a.d #24 ENSGT00950000183135.A.a ENSGT00940000156245.a.b.c #21 ENSGT00390000017955.d.h #22 ENSGT00990000203802 ENSGT00390000007486.d ENSGT00940000159758.h.b ENSGT01050000244890.a.a.a.g.d ENSGT00950000183094.b.b.d ENSGT00940000170761 ENSGT00940000155689.p ENSGT00940000159209.c ENSGT00940000160023.g ENSGT01050000244814.a.a.b.b.b.a.a.d.a.f.b ENSGT00940000155620.q.a ENSGT00940000158230.b.b.c ENSGT00940000160242.b.b ENSGT00940000154107.b ENSGT00940000154995.eb Atlantic salmon MODERN SPECIES 19 pdk4 (ENSSSAG00000064446) DYNC1I1 (ENSSSAG00000058478) SLC25A13 (ENSSSAG00000106435) dlx6a (ENSSSAG00000086284) dlx5a (ENSSSAG00000050594) ago2 (ENSSSAG00000048206) ENSSSAG00000048099 catsper4 (ENSSSAG00000048087) ENSSSAG00000094989 lrrc14b (ENSSSAG00000103287) uqcrb (ENSSSAG00000047957) mterf3 (ENSSSAG00000047981) PTDSS1 (ENSSSAG00000057950) ENSSSAG00000047460 ENSSSAG00000047472 #24 cap2 (ENSSSAG00000047393) #22 ENSSSAG00000095343 grinaa (ENSSSAG00000047153) ENSSSAG00000047124 ENSSSAG00000046875 ENSSSAG00000046856 ENSSSAG00000046830 ENSSSAG00000068152 ubql4 (ENSSSAG00000046723) ENSSSAG00000046697 ENSSSAG00000046690 ENSSSAG00000046678 kat2b (ENSSSAG00000046492) RAB5A (ENSSSAG00000110045) ENSSSAG00000045793 satb1a (ENSSSAG00000114957) Huchen MODERN SPECIES 757 ago2 (ENSHHUG00000012785) chrac1 (ENSHHUG00000012772) gatad1 (ENSHHUG00000012754) ENSHHUG00000012736 ENSHHUG00000012726 lrrc14b (ENSHHUG00000012721) uqcrb (ENSHHUG00000012687) ENSHHUG00000012677 PTDSS1 (ENSHHUG00000012664) ENSHHUG00000012661 ENSHHUG00000012659 ENSHHUG00000012658 ENSHHUG00000012656 ENSHHUG00000012653 rbm24a (ENSHHUG00000012646) #21 cap2 (ENSHHUG00000012633) #22 vps28 (ENSHHUG00000012618) mapk15 (ENSHHUG00000012510) grinaa (ENSHHUG00000012493) RPRD1A (ENSHHUG00000012487) ENSHHUG00000012471 nfyc (ENSHHUG00000012397) ENSHHUG00000012386 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00390000013934 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT01030000236049 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000170872 ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000170872 ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b Seriola ANCESTRAL SPECIES 12 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Yellowtail amberjack MODERN SPECIES 2890 tmem64 (ENSSLDG00000013001) necab1 (ENSSLDG00000012973) pip4p2 (ENSSLDG00000012914) ENSSLDG00000012885 chrac1 (ENSSLDG00000012867) gatad1 (ENSSLDG00000012847) ENSSLDG00000012827 uqcrb (ENSSLDG00000012803) lrrc14b (ENSSLDG00000012817) mterf3 (ENSSLDG00000012787) PTDSS1 (ENSSLDG00000012746) nup153 (ENSSLDG00000012692) #24 ENSSLDG00000012673 rbm24a (ENSSLDG00000012657) #21 ENSSLDG00000012650 cap2 (ENSSLDG00000012629) #22 vps28 (ENSSLDG00000012600) mapk15 (ENSSLDG00000012575) grinaa (ENSSLDG00000012540) ENSSLDG00000012476 fam83hb (ENSSLDG00000012462) ENSSLDG00000012445 ankib1a (ENSSLDG00000011965) snrpd1 (ENSSLDG00000011858) ggcta (ENSSLDG00000011833) adnp2b (ENSSLDG00000011825) azin1b (ENSSLDG00000011808) ATP6V1C1 (ENSSLDG00000011761) ENSSLDG00000011748 spire1a (ENSSLDG00000011546) klhl38a (ENSSLDG00000011472) Barramundi perch MODERN SPECIES 160 zgc:111986 (ENSLCAG00010013903) acot13 (ENSLCAG00010013902) tdp2b (ENSLCAG00010013901) tmem64 (ENSLCAG00010013899) necab1 (ENSLCAG00010013897) pip4p2 (ENSLCAG00010013896) chrac1 (ENSLCAG00010013893) gatad1 (ENSLCAG00010013891) ENSLCAG00010013889 lrrc14b (ENSLCAG00010013845) uqcrb (ENSLCAG00010013832) PTDSS1 (ENSLCAG00010013750) nup153 (ENSLCAG00010013726) #24 ENSLCAG00010013725 rbm24a (ENSLCAG00010013720) #21 cap2 (ENSLCAG00010013650) #22 mterf3 (ENSLCAG00010013629) vps28 (ENSLCAG00010013611) mapk15 (ENSLCAG00010013602) grinaa (ENSLCAG00010013593) ENSLCAG00010013585 fam83hb (ENSLCAG00010013581) ENSLCAG00010013577 ankib1a (ENSLCAG00010013562) snrpd1 (ENSLCAG00010013546) ggcta (ENSLCAG00010013540) adnp2b (ENSLCAG00010013524) azin1b (ENSLCAG00010013514) ATP6V1C1 (ENSLCAG00010013494) ENSLCAG00010013487 spire1a (ENSLCAG00010013473) Pleuronectoidei ANCESTRAL SPECIES 15 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00940000175699 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Tongue sole MODERN SPECIES 9 rrm2b (ENSCSEG00000017736) mtdha (ENSCSEG00000017759) tmem64 (ENSCSEG00000017781) necab1 (ENSCSEG00000017793) pip4p2 (ENSCSEG00000017828) chrac1 (ENSCSEG00000017858) ENSCSEG00000017869 gatad1 (ENSCSEG00000017873) ENSCSEG00000017887 lrrc14b (ENSCSEG00000017894) uqcrb (ENSCSEG00000017897) mterf3 (ENSCSEG00000017906) nup153 (ENSCSEG00000017912) #24 ENSCSEG00000017940 rbm24a (ENSCSEG00000017958) #21 cap2 (ENSCSEG00000017968) #22 ENSCSEG00000017994 vps28 (ENSCSEG00000018004) mapk15 (ENSCSEG00000018008) grinaa (ENSCSEG00000018022) grinaa (ENSCSEG00000018033) ENSCSEG00000018053 fam83hb (ENSCSEG00000018065) ankib1a (ENSCSEG00000018085) snrpd1 (ENSCSEG00000018141) ggcta (ENSCSEG00000018149) adnp2b (ENSCSEG00000018160) azin1b (ENSCSEG00000018171) ATP6V1C1 (ENSCSEG00000018200) ENSCSEG00000018243 spire1a (ENSCSEG00000018257) Ballan wrasse MODERN SPECIES 42 snrnp40 (ENSLBEG00000002611) zcchc17 (ENSLBEG00000002644) fabp3 (ENSLBEG00000002665) ENSLBEG00000002697 cyhr1 (ENSLBEG00000002750) ENSLBEG00000002779 pdcd6ip (ENSLBEG00000002824) ubp1 (ENSLBEG00000002852) lrrc14b (ENSLBEG00000002930) uqcrb (ENSLBEG00000002936) mterf3 (ENSLBEG00000002946) PTDSS1 (ENSLBEG00000002956) nup153 (ENSLBEG00000002982) #24 ENSLBEG00000003003 rbm24a (ENSLBEG00000003025) #21 cap2 (ENSLBEG00000003042) #22 ENSLBEG00000003060 vps28 (ENSLBEG00000003079) mapk15 (ENSLBEG00000003106) grinaa (ENSLBEG00000003138) fam83hb (ENSLBEG00000003167) ENSLBEG00000003195 ankib1a (ENSLBEG00000003232) snrpd1 (ENSLBEG00000003327) ggcta (ENSLBEG00000003347) adnp2b (ENSLBEG00000003377) azin1b (ENSLBEG00000003392) ATP6V1C1 (ENSLBEG00000003429) ENSLBEG00000003490 spire1a (ENSLBEG00000003556) klhl38a (ENSLBEG00000003743) Perciformes ANCESTRAL SPECIES 11 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Cottioidei ANCESTRAL SPECIES 16 ENSGT00390000013934 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Stickleback MODERN SPECIES 9 ENSGACG00000005588 ENSGACG00000005581 pdcd6ip (ENSGACG00000005555) ubp1 (ENSGACG00000005520) clasp2 (ENSGACG00000005497) ENSGACG00000005492 fbxl2 (ENSGACG00000005445) ENSGACG00000005443 gatad1 (ENSGACG00000005433) lrrc14b (ENSGACG00000005427) uqcrb (ENSGACG00000005419) mterf3 (ENSGACG00000005407) PTDSS1 (ENSGACG00000005401) nup153 (ENSGACG00000005389) #24 rbm24a (ENSGACG00000005383) #21 cap2 (ENSGACG00000005348) #22 vps28 (ENSGACG00000005283) mapk15 (ENSGACG00000005266) grinaa (ENSGACG00000005238) ENSGACG00000005237 ENSGACG00000005235 ankib1a (ENSGACG00000005220) snrpd1 (ENSGACG00000005201) ggcta (ENSGACG00000005197) adnp2b (ENSGACG00000005193) azin1b (ENSGACG00000005185) ATP6V1C1 (ENSGACG00000005164) spire1a (ENSGACG00000005147) klhl38a (ENSGACG00000005128) fam91a1 (ENSGACG00000005113) TRIB1 (ENSGACG00000005101) Lumpfish MODERN SPECIES 2 acot13 (ENSCLMG00005004017) tdp2b (ENSCLMG00005004019) tmem64 (ENSCLMG00005004021) necab1 (ENSCLMG00005004022) pip4p2 (ENSCLMG00005004024) chrac1 (ENSCLMG00005004025) gatad1 (ENSCLMG00005004026) ENSCLMG00005004028 lrrc14b (ENSCLMG00005004029) uqcrb (ENSCLMG00005004030) mterf3 (ENSCLMG00005004032) PTDSS1 (ENSCLMG00005004035) nup153 (ENSCLMG00005004053) #24 ENSCLMG00005004054 rbm24a (ENSCLMG00005004055) #21 cap2 (ENSCLMG00005004056) #22 ENSCLMG00005004057 vps28 (ENSCLMG00005004059) mapk15 (ENSCLMG00005004068) grinaa (ENSCLMG00005004093) ENSCLMG00005001373 fam83hb (ENSCLMG00005001398) ENSCLMG00005001410 ankib1a (ENSCLMG00005001446) snrpd1 (ENSCLMG00005001478) ggcta (ENSCLMG00005001500) adnp2b (ENSCLMG00005001518) azin1b (ENSCLMG00005001531) ATP6V1C1 (ENSCLMG00005001565) ENSCLMG00005001685 spire1a (ENSCLMG00005001728) Channel bull blenny MODERN SPECIES 2 stmn2b (ENSCGOG00000005177) ##20 si:dkeyp-120h9.1 (ENSCGOG00000005111) ripor2 (ENSCGOG00000005003) tmem64 (ENSCGOG00000004999) necab1 (ENSCGOG00000004870) pip4p2 (ENSCGOG00000004861) chrac1 (ENSCGOG00000004859) gatad1 (ENSCGOG00000004837) ENSCGOG00000004812 lrrc14b (ENSCGOG00000004829) uqcrb (ENSCGOG00000004832) mterf3 (ENSCGOG00000004808) PTDSS1 (ENSCGOG00000004542) nup153 (ENSCGOG00000004494) #24 rbm24a (ENSCGOG00000004473) #21 cap2 (ENSCGOG00000004289) #22 ENSCGOG00000004279 vps28 (ENSCGOG00000004185) mapk15 (ENSCGOG00000004145) grinaa (ENSCGOG00000004125) ENSCGOG00000004100 fam83hb (ENSCGOG00000004088) ENSCGOG00000004071 ankib1a (ENSCGOG00000023945) snrpd1 (ENSCGOG00000023934) ggcta (ENSCGOG00000023933) adnp2b (ENSCGOG00000023932) azin1b (ENSCGOG00000023931) ATP6V1C1 (ENSCGOG00000023860) ENSCGOG00000023849 spire1a (ENSCGOG00000023833) Pike perch MODERN SPECIES 13 tdp2b (ENSSLUG00000002868) tmem64 (ENSSLUG00000002878) necab1 (ENSSLUG00000002882) pip4p2 (ENSSLUG00000002892) chrac1 (ENSSLUG00000002902) gatad1 (ENSSLUG00000002907) ENSSLUG00000002918 lrrc14b (ENSSLUG00000002930) uqcrb (ENSSLUG00000002943) mterf3 (ENSSLUG00000002953) PTDSS1 (ENSSLUG00000002976) nup153 (ENSSLUG00000003012) #24 ENSSLUG00000003040 ENSSLUG00000003053 rbm24a (ENSSLUG00000003068) #21 cap2 (ENSSLUG00000003398) #22 ENSSLUG00000005545 vps28 (ENSSLUG00000005096) mapk15 (ENSSLUG00000005143) grinaa (ENSSLUG00000005219) ENSSLUG00000005246 fam83hb (ENSSLUG00000005265) ENSSLUG00000005278 ankib1a (ENSSLUG00000005338) snrpd1 (ENSSLUG00000005405) ggcta (ENSSLUG00000005410) adnp2b (ENSSLUG00000005416) azin1b (ENSSLUG00000005422) ATP6V1C1 (ENSSLUG00000005446) ENSSLUG00000005505 spire1a (ENSSLUG00000005539) Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00390000013934 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000170872 ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 European seabass MODERN SPECIES 22 gmnn (ENSDLAG00005019629) zgc:111986 (ENSDLAG00005034587) acot13 (ENSDLAG00005032143) tdp2b (ENSDLAG00005019595) tmem64 (ENSDLAG00005030422) ENSDLAG00005019587 necab1 (ENSDLAG00005019572) pip4p2 (ENSDLAG00005033901) ENSDLAG00005019540 ENSDLAG00005034591 ENSDLAG00005031746 ENSDLAG00005019423 ENSDLAG00005019397 #24 rbm24a (ENSDLAG00005019381) #21 ENSDLAG00005028613 cap2 (ENSDLAG00005019311) #22 vps28 (ENSDLAG00005019251) mapk15 (ENSDLAG00005019224) grinaa (ENSDLAG00005019202) ENSDLAG00005019192 ENSDLAG00005019176 ENSDLAG00005019173 ENSDLAG00005019071 ENSDLAG00005032829 ENSDLAG00005019038 ENSDLAG00005019031 azin1b (ENSDLAG00005019015) ENSDLAG00005018964 ENSDLAG00005018958 spire1a (ENSDLAG00005018793) klhl38a (ENSDLAG00005018787) Gilthead seabream MODERN SPECIES 17 gmnn (ENSSAUG00010003942) zgc:111986 (ENSSAUG00010003948) acot13 (ENSSAUG00010003950) tdp2b (ENSSAUG00010003954) tmem64 (ENSSAUG00010003956) necab1 (ENSSAUG00010003959) pip4p2 (ENSSAUG00010003966) chrac1 (ENSSAUG00010003968) gatad1 (ENSSAUG00010003974) ENSSAUG00010003978 lrrc14b (ENSSAUG00010003981) UQCRB (ENSSAUG00010003983) mterf3 (ENSSAUG00010003986) nup153 (ENSSAUG00010003999) #24 rbm24a (ENSSAUG00010004042) #21 cap2 (ENSSAUG00010004055) #22 ENSSAUG00010005908 vps28 (ENSSAUG00010005909) mapk15 (ENSSAUG00010005915) grinaa (ENSSAUG00010005919) si:ch211-199g17.9 (ENSSAUG00010005920) fam83hb (ENSSAUG00010005924) ENSSAUG00010005926 ankib1a (ENSSAUG00010005930) snrpd1 (ENSSAUG00010005947) ggcta (ENSSAUG00010005948) adnp2b (ENSSAUG00010005950) azin1b (ENSSAUG00010005954) ATP6V1C1 (ENSSAUG00010005959) ENSSAUG00010005974 spire1a (ENSSAUG00010005981) Tetraodontidae ANCESTRAL SPECIES 20 ENSGT00950000183176.b.f ENSGT01030000234950 ENSGT00390000010285.c ENSGT00950000182986.a.b.b ENSGT00550000074698 ENSGT00530000063461.A.b ENSGT00940000157893 ENSGT00940000155549.a.a.b ENSGT00950000183051.a.a.a ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a ENSGT00390000009543 Tetraodon DUPLICATION Tetraodon MODERN SPECIES 15 runx1t1 (ENSTNIG00000009194) cibar1 (ENSTNIG00000009193) TRIB1 (ENSTNIG00000009192) rplp1 (ENSTNIG00000009191) clptm1l (ENSTNIG00000009190) ENSTNIG00000009189 ENSTNIG00000009188 CSMD3 (ENSTNIG00000009187) tshz1 (ENSTNIG00000001441) lrrc14b (ENSTNIG00000009186) uqcrb (ENSTNIG00000009185) mterf3 (ENSTNIG00000009184) PTDSS1 (ENSTNIG00000009183) nup153 (ENSTNIG00000009182) #24 rbm24a (ENSTNIG00000009181) #21 cap2 (ENSTNIG00000009180) #22 cap2 (ENSTNIG00000000065) #22 vps28 (ENSTNIG00000009179) mapk15 (ENSTNIG00000009178) grinaa (ENSTNIG00000000386) fam83hb (ENSTNIG00000009177) ENSTNIG00000001242 ankib1a (ENSTNIG00000009176) snrpd1 (ENSTNIG00000001224) ggcta (ENSTNIG00000009175) adnp2b (ENSTNIG00000009174) azin1b (ENSTNIG00000009173) ATP6V1C1 (ENSTNIG00000009172) ENSTNIG00000009171 spire1a (ENSTNIG00000009170) fam91a1 (ENSTNIG00000009169) Tetraodon MODERN SPECIES 15 cibar1 (ENSTNIG00000009193) TRIB1 (ENSTNIG00000009192) rplp1 (ENSTNIG00000009191) clptm1l (ENSTNIG00000009190) ENSTNIG00000009189 ENSTNIG00000009188 CSMD3 (ENSTNIG00000009187) tshz1 (ENSTNIG00000001441) lrrc14b (ENSTNIG00000009186) uqcrb (ENSTNIG00000009185) mterf3 (ENSTNIG00000009184) PTDSS1 (ENSTNIG00000009183) nup153 (ENSTNIG00000009182) #24 rbm24a (ENSTNIG00000009181) #21 cap2 (ENSTNIG00000009180) #22 cap2 (ENSTNIG00000000065) #22 vps28 (ENSTNIG00000009179) mapk15 (ENSTNIG00000009178) grinaa (ENSTNIG00000000386) fam83hb (ENSTNIG00000009177) ENSTNIG00000001242 ankib1a (ENSTNIG00000009176) snrpd1 (ENSTNIG00000001224) ggcta (ENSTNIG00000009175) adnp2b (ENSTNIG00000009174) azin1b (ENSTNIG00000009173) ATP6V1C1 (ENSTNIG00000009172) ENSTNIG00000009171 spire1a (ENSTNIG00000009170) fam91a1 (ENSTNIG00000009169) PTK2 (ENSTNIG00000009167) Fugu MODERN SPECIES 3 ENSTRUG00000029066 cibar1 (ENSTRUG00000001486) TRIB1 (ENSTRUG00000028474) rplp1 (ENSTRUG00000005235) clptm1l (ENSTRUG00000005291) trps1 (ENSTRUG00000021680) ENSTRUG00000024953 tshz1 (ENSTRUG00000010712) ENSTRUG00000032760 lrrc14b (ENSTRUG00000010672) uqcrb (ENSTRUG00000010634) mterf3 (ENSTRUG00000010597) PTDSS1 (ENSTRUG00000010448) nup153 (ENSTRUG00000010163) #24 rbm24a (ENSTRUG00000010089) #21 cap2 (ENSTRUG00000009507) #22 vps28 (ENSTRUG00000009357) mapk15 (ENSTRUG00000009284) grina (ENSTRUG00000009217) ENSTRUG00000029207 fam83hb (ENSTRUG00000009193) ENSTRUG00000023862 ankib1a (ENSTRUG00000009032) snrpd1 (ENSTRUG00000008977) ggcta (ENSTRUG00000021278) adnp2b (ENSTRUG00000030984) azin1b (ENSTRUG00000020120) ATP6V1C1 (ENSTRUG00000008427) ENSTRUG00000020546 spire1a (ENSTRUG00000008095) fam91a1 (ENSTRUG00000007769) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT01030000236049 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000170872 ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 Pomacentridae ANCESTRAL SPECIES 7 ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Pomacentridae_A ANCESTRAL SPECIES 6 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Amphiprion ANCESTRAL SPECIES 16 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a ENSGT00940000157647.c Orange clownfish MODERN SPECIES 8 tdp2b (ENSAPEG00000011823) tmem64 (ENSAPEG00000011858) necab1 (ENSAPEG00000011871) pip4p2 (ENSAPEG00000011884) ENSAPEG00000011917 chrac1 (ENSAPEG00000011924) gatad1 (ENSAPEG00000011960) ENSAPEG00000011999 lrrc14b (ENSAPEG00000012019) uqcrb (ENSAPEG00000012028) mterf3 (ENSAPEG00000012039) PTDSS1 (ENSAPEG00000012052) nup153 (ENSAPEG00000012075) #24 ENSAPEG00000012202 rbm24a (ENSAPEG00000012234) #21 cap2 (ENSAPEG00000012260) #22 vps28 (ENSAPEG00000012319) mapk15 (ENSAPEG00000012344) grinaa (ENSAPEG00000012359) ENSAPEG00000012368 fam83hb (ENSAPEG00000012397) ENSAPEG00000012406 ankib1a (ENSAPEG00000012428) snrpd1 (ENSAPEG00000012539) ggcta (ENSAPEG00000012577) adnp2b (ENSAPEG00000012768) azin1b (ENSAPEG00000012782) ATP6V1C1 (ENSAPEG00000012792) ENSAPEG00000012837 spire1a (ENSAPEG00000012862) klhl38a (ENSAPEG00000012991) Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b.b ENSGT00940000170872 ENSGT00940000164175.b.a.b ENSGT00940000164175.b.a.a ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00940000175699 ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d.b.b.b.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b.b ENSGT00940000170872 ENSGT00940000164175.b.a.b ENSGT00940000164175.b.a.a ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00940000175699 ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d.b.b.b.b Haplochromini ANCESTRAL SPECIES 5 ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b.b ENSGT00940000170872 ENSGT00940000164175.b.a.b ENSGT00940000164175.b.a.a ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00940000175699 ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d.b.b.b.b Burton s mouthbrooder MODERN SPECIES 288 azin1b (ENSHBUG00000003342) adnp2b (ENSHBUG00000003303) ggcta (ENSHBUG00000003291) snrpd1 (ENSHBUG00000003236) ankib1a (ENSHBUG00000003207) ENSHBUG00000003187 ENSHBUG00000003176 ENSHBUG00000003166 ENSHBUG00000003152 fam83hb (ENSHBUG00000003140) ENSHBUG00000003133 grinaa (ENSHBUG00000003117) mapk15 (ENSHBUG00000003092) ENSHBUG00000003084 rbm24a (ENSHBUG00000003071) #21 cap2 (ENSHBUG00000003056) #22 ENSHBUG00000003013 vps28 (ENSHBUG00000002995) nup153 (ENSHBUG00000002944) #24 PTDSS1 (ENSHBUG00000002919) mterf3 (ENSHBUG00000002872) uqcrb (ENSHBUG00000002837) lrrc14b (ENSHBUG00000002861) ENSHBUG00000002824 gatad1 (ENSHBUG00000002796) chrac1 (ENSHBUG00000002775) ENSHBUG00000002757 pip4p2 (ENSHBUG00000002752) necab1 (ENSHBUG00000000785) tmem64 (ENSHBUG00000002729) tdp2b (ENSHBUG00000002714) Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b.b ENSGT00940000170872 ENSGT00940000164175.b.a.b ENSGT00940000164175.b.a.a ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00940000175699 ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d.b.b.b.b P. nyererei MODERN SPECIES 323 azin1b (ENSPNYG00000010912) adnp2b (ENSPNYG00000010918) ggcta (ENSPNYG00000010921) snrpd1 (ENSPNYG00000010941) ENSPNYG00000010950 ENSPNYG00000010959 ENSPNYG00000010967 ENSPNYG00000010977 ENSPNYG00000010984 fam83hb (ENSPNYG00000010992) ENSPNYG00000011007 grinaa (ENSPNYG00000011030) mapk15 (ENSPNYG00000011059) ENSPNYG00000011092 rbm24a (ENSPNYG00000011118) #21 cap2 (ENSPNYG00000011139) #22 ENSPNYG00000011190 vps28 (ENSPNYG00000011201) nup153 (ENSPNYG00000011225) #24 PTDSS1 (ENSPNYG00000011301) mterf3 (ENSPNYG00000011322) lrrc14b (ENSPNYG00000011339) uqcrb (ENSPNYG00000011333) gatad1 (ENSPNYG00000011347) chrac1 (ENSPNYG00000011362) ENSPNYG00000011377 pip4p2 (ENSPNYG00000011387) necab1 (ENSPNYG00000011421) tmem64 (ENSPNYG00000011486) tdp2b (ENSPNYG00000011504) tdp2b (ENSPNYG00000011532) Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000164175.b.b ENSGT00940000170872 ENSGT00940000164175.b.a.b ENSGT00940000164175.b.a.a ENSGT00940000159342.a ENSGT00940000172951 ENSGT01050000244890.a.a.a.g ENSGT00940000159758 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00940000175699 ENSGT00390000018554 ENSGT00940000166127 ENSGT00940000176913 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d.b.b.b.b Eastern happy MODERN SPECIES 13 ATP6V1C1 (ENSACLG00000017479) azin1b (ENSACLG00000017457) adnp2b (ENSACLG00000017453) ggcta (ENSACLG00000017417) snrpd1 (ENSACLG00000017406) ankib1a (ENSACLG00000017157) ENSACLG00000017138 ENSACLG00000017122 ENSACLG00000017105 fam83hb (ENSACLG00000017085) ENSACLG00000017034 grinaa (ENSACLG00000017022) mapk15 (ENSACLG00000016990) ENSACLG00000016961 rbm24a (ENSACLG00000016929) #21 cap2 (ENSACLG00000016880) #22 ENSACLG00000016865 vps28 (ENSACLG00000016839) nup153 (ENSACLG00000016592) #24 PTDSS1 (ENSACLG00000016542) mterf3 (ENSACLG00000016514) uqcrb (ENSACLG00000016495) lrrc14b (ENSACLG00000016489) ENSACLG00000016446 gatad1 (ENSACLG00000016410) ENSACLG00000016399 chrac1 (ENSACLG00000016370) pip4p2 (ENSACLG00000016334) necab1 (ENSACLG00000016259) tmem64 (ENSACLG00000016233) tdp2b (ENSACLG00000016217) Zebra mbuna MODERN SPECIES 1104 ATP6V1C1 (ENSMZEG00005004864) azin1b (ENSMZEG00005004859) adnp2b (ENSMZEG00005004852) ggcta (ENSMZEG00005004731) snrpd1 (ENSMZEG00005004685) ankib1a (ENSMZEG00005004634) ENSMZEG00005004618 ENSMZEG00005004614 ENSMZEG00005004602 ENSMZEG00005004592 fam83hb (ENSMZEG00005004572) ENSMZEG00005004552 grinaa (ENSMZEG00005004522) mapk15 (ENSMZEG00005004506) rbm24a (ENSMZEG00005004491) #21 cap2 (ENSMZEG00005004446) #22 ENSMZEG00005004426 vps28 (ENSMZEG00005004415) nup153 (ENSMZEG00005004371) #24 PTDSS1 (ENSMZEG00005004326) mterf3 (ENSMZEG00005004309) uqcrb (ENSMZEG00005004306) lrrc14b (ENSMZEG00005004298) gatad1 (ENSMZEG00005004278) chrac1 (ENSMZEG00005004258) ENSMZEG00005004244 pip4p2 (ENSMZEG00005004208) necab1 (ENSMZEG00005004181) tmem64 (ENSMZEG00005004169) tdp2b (ENSMZEG00005004153) tdp2b (ENSMZEG00005004126) Lyretail cichlid MODERN SPECIES 302 ATP6V1C1 (ENSNBRG00000012031) azin1b (ENSNBRG00000012071) adnp2b (ENSNBRG00000012098) ggcta (ENSNBRG00000012105) snrpd1 (ENSNBRG00000012119) ENSNBRG00000012132 ENSNBRG00000012136 ENSNBRG00000012143 ENSNBRG00000012158 fam83hb (ENSNBRG00000012168) ENSNBRG00000012242 grinaa (ENSNBRG00000012276) mapk15 (ENSNBRG00000012296) ENSNBRG00000012336 rbm24a (ENSNBRG00000012347) #21 cap2 (ENSNBRG00000012366) #22 ENSNBRG00000012401 vps28 (ENSNBRG00000012420) nup153 (ENSNBRG00000012456) #24 PTDSS1 (ENSNBRG00000012509) mterf3 (ENSNBRG00000012537) lrrc14b (ENSNBRG00000012549) uqcrb (ENSNBRG00000012566) ENSNBRG00000012578 gatad1 (ENSNBRG00000012605) chrac1 (ENSNBRG00000012613) ENSNBRG00000012632 pip4p2 (ENSNBRG00000012644) necab1 (ENSNBRG00000012685) tmem64 (ENSNBRG00000012741) tdp2b (ENSNBRG00000012752) Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000170872 ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a Aplocheiloidei ANCESTRAL SPECIES 9 ENSGT00390000008115 ENSGT00390000013934 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000170872 ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 Mangrove rivulus MODERN SPECIES 2 acot13 (ENSKMAG00000006652) tdp2b (ENSKMAG00000006626) tmem64 (ENSKMAG00000006610) necab1 (ENSKMAG00000006548) pip4p2 (ENSKMAG00000006491) ENSKMAG00000006480 chrac1 (ENSKMAG00000006467) gatad1 (ENSKMAG00000006435) lrrc14b (ENSKMAG00000006406) uqcrb (ENSKMAG00000006416) mterf3 (ENSKMAG00000006393) PTDSS1 (ENSKMAG00000006369) nup153 (ENSKMAG00000006344) #24 rbm24a (ENSKMAG00000006314) #21 ENSKMAG00000006293 cap2 (ENSKMAG00000006237) #22 vps28 (ENSKMAG00000006226) mapk15 (ENSKMAG00000006173) grinaa (ENSKMAG00000006158) ENSKMAG00000006109 fam83hb (ENSKMAG00000006085) ENSKMAG00000006069 ankib1a (ENSKMAG00000006009) snrpd1 (ENSKMAG00000005987) ggcta (ENSKMAG00000005949) adnp2b (ENSKMAG00000005923) azin1b (ENSKMAG00000005902) ATP6V1C1 (ENSKMAG00000005843) ENSKMAG00000005812 DNAH8 (ENSKMAG00000005636) spire1a (ENSKMAG00000005513) Turquoise killifish MODERN SPECIES 1628 cfap300 (ENSNFUG00015019344) vamp8 (ENSNFUG00015019343) ncaph (ENSNFUG00015019332) TINAGL1 (ENSNFUG00015019296) LIM2 (ENSNFUG00015019294) UBQLN4 (ENSNFUG00015019223) rab25a (ENSNFUG00015019204) ZNF385D (ENSNFUG00015019197) ENSNFUG00015019192 kat2b (ENSNFUG00015018758) RAB5AA (ENSNFUG00015018732) OTUD6B (ENSNFUG00015018725) runx1t1 (ENSNFUG00015018373) TRIQK (ENSNFUG00015018355) RBM24A (ENSNFUG00015018351) #21 CAP2 (ENSNFUG00015017505) #22 ENSNFUG00015017450 VPS28 (ENSNFUG00015017422) mapk15 (ENSNFUG00015017393) GRINA (ENSNFUG00015017387) ENSNFUG00015017376 FAM83H (ENSNFUG00015017368) TMEM55A (ENSNFUG00015017363) CHRAC1 (ENSNFUG00015017353) GATAD1 (ENSNFUG00015017344) lrrc14b (ENSNFUG00015017343) UQCRB (ENSNFUG00015017341) MTERFD1 (ENSNFUG00015017337) PTDSS1 (ENSNFUG00015016931) nup153 (ENSNFUG00015016874) #24 cibar1 (ENSNFUG00015016863) Mummichog MODERN SPECIES 2253 tmem64 (ENSFHEG00000013132) necab1 (ENSFHEG00000013206) pip4p2 (ENSFHEG00000013242) ENSFHEG00000013260 chrac1 (ENSFHEG00000013264) gatad1 (ENSFHEG00000013299) lrrc14b (ENSFHEG00000013307) uqcrb (ENSFHEG00000013316) mterf3 (ENSFHEG00000013330) PTDSS1 (ENSFHEG00000013344) nup153 (ENSFHEG00000013401) #24 ENSFHEG00000013415 ENSFHEG00000013430 rbm24a (ENSFHEG00000013449) #21 ENSFHEG00000013462 cap2 (ENSFHEG00000013505) #22 grinaa (ENSFHEG00000000308) ENSFHEG00000013518 fam83hb (ENSFHEG00000013522) ENSFHEG00000013536 ankib1a (ENSFHEG00000013602) snrpd1 (ENSFHEG00000000642) ggcta (ENSFHEG00000013631) adnp2b (ENSFHEG00000013651) azin1b (ENSFHEG00000013661) ATP6V1C1 (ENSFHEG00000013699) ENSFHEG00000013717 spire1a (ENSFHEG00000013757) klhl38a (ENSFHEG00000013770) fam91a1 (ENSFHEG00000013823) lratd2a (ENSFHEG00000013840) Sheepshead minnow MODERN SPECIES 493 glud1b (ENSCVAG00000020398) sncgb (ENSCVAG00000020419) ldb3b (ENSCVAG00000020462) OPN4 (ENSCVAG00000020486) necab1 (ENSCVAG00000020500) pip4p2 (ENSCVAG00000020545) chrac1 (ENSCVAG00000020564) gatad1 (ENSCVAG00000020586) lrrc14b (ENSCVAG00000020598) uqcrb (ENSCVAG00000020601) mterf3 (ENSCVAG00000020609) PTDSS1 (ENSCVAG00000020627) nup153 (ENSCVAG00000020646) #24 ENSCVAG00000020663 rbm24a (ENSCVAG00000020675) #21 cap2 (ENSCVAG00000020688) #22 vps28 (ENSCVAG00000020735) mapk15 (ENSCVAG00000020748) grinaa (ENSCVAG00000020754) fam83hb (ENSCVAG00000020763) ENSCVAG00000020784 ankib1a (ENSCVAG00000020801) snrpd1 (ENSCVAG00000000534) ggcta (ENSCVAG00000020809) adnp2b (ENSCVAG00000020816) azin1b (ENSCVAG00000000884) ATP6V1C1 (ENSCVAG00000020873) ENSCVAG00000020881 spire1a (ENSCVAG00000021020) klhl38a (ENSCVAG00000021064) fam91a1 (ENSCVAG00000021147) Poeciliinae ANCESTRAL SPECIES 18 ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00990000203802 ENSGT00390000017955.d #22 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a ENSGT00940000157647.c Poecilia ANCESTRAL SPECIES 24 ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000176913 ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00990000203802 ENSGT00390000017955.d #22 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000159342.a ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a ENSGT00940000157647.c NAME_6 ANCESTRAL SPECIES 21 ENSGT00390000013934 ENSGT00390000014242.k.d ENSGT00390000007813 ENSGT00950000183131.b.a ENSGT00390000003680.b ENSGT00940000166127 ENSGT00390000018554 ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000153253.a #24 ENSGT00940000177955 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000172951 ENSGT00940000157889.h ENSGT00940000164175.b ENSGT00940000165758 ENSGT00510000047245 ENSGT00500000044921.a ENSGT00530000063631.a.k ENSGT00950000182995.e.b.`b ENSGT00390000004263.a.d.b ENSGT01030000234787 ENSGT00390000003058.b.a.a.a.a ENSGT00940000157647.c Sailfin molly MODERN SPECIES 334 ENSPLAG00000000142 ENSPLAG00000006528 rbm24a (ENSPLAG00000006542) #21 cap2 (ENSPLAG00000006580) #22 vps28 (ENSPLAG00000006617) mapk15 (ENSPLAG00000006645) grinaa (ENSPLAG00000006654) ENSPLAG00000006668 ENSPLAG00000006671 ENSPLAG00000006679 ankib1a (ENSPLAG00000006703) snrpd1 (ENSPLAG00000006738) ggcta (ENSPLAG00000006751) adnp2b (ENSPLAG00000006767) azin1b (ENSPLAG00000006774) ATP6V1C1 (ENSPLAG00000006835) ENSPLAG00000006857 spire1a (ENSPLAG00000006927) klhl38a (ENSPLAG00000006949) Guppy MODERN SPECIES 441 tdp2b (ENSPREG00000007835) tmem64 (ENSPREG00000007820) necab1 (ENSPREG00000007782) pip4p2 (ENSPREG00000007766) ENSPREG00000007752 chrac1 (ENSPREG00000007660) gatad1 (ENSPREG00000007634) lrrc14b (ENSPREG00000007615) uqcrb (ENSPREG00000007600) mterf3 (ENSPREG00000007531) PTDSS1 (ENSPREG00000007491) nup153 (ENSPREG00000007463) #24 ENSPREG00000007449 rbm24a (ENSPREG00000007414) #21 ENSPREG00000007389 cap2 (ENSPREG00000007378) #22 vps28 (ENSPREG00000007352) mapk15 (ENSPREG00000007305) grinaa (ENSPREG00000007260) fam83hb (ENSPREG00000007242) ENSPREG00000007212 ankib1a (ENSPREG00000007115) snrpd1 (ENSPREG00000007094) ggcta (ENSPREG00000007067) adnp2b (ENSPREG00000007061) azin1b (ENSPREG00000007004) ATP6V1C1 (ENSPREG00000006953) ENSPREG00000006936 spire1a (ENSPREG00000006919) klhl38a (ENSPREG00000006908) fam91a1 (ENSPREG00000006792) Platyfish MODERN SPECIES 4 zgc:111986 (ENSXMAG00000003531) acot13 (ENSXMAG00000003529) tdp2b (ENSXMAG00000024728) tmem64 (ENSXMAG00000028008) necab1 (ENSXMAG00000003504) pip4p2 (ENSXMAG00000003494) chrac1 (ENSXMAG00000023014) lrrc14b (ENSXMAG00000021572) uqcrb (ENSXMAG00000003473) mterf3 (ENSXMAG00000003462) PTDSS1 (ENSXMAG00000003441) nup153 (ENSXMAG00000003437) #24 ENSXMAG00000003435 rbm24a (ENSXMAG00000029809) #21 ENSXMAG00000029790 cap2 (ENSXMAG00000003391) #22 ENSXMAG00000021440 abrab (ENSXMAG00000023570) rnmt (ENSXMAG00000021564) ENSXMAG00000022610 Oryzias_b ANCESTRAL SPECIES 22 ENSGT00390000009543 ENSGT00940000157647.c ENSGT00390000003058.b.a.a.a.a ENSGT01030000234787 ENSGT00390000004263.a.d.b ENSGT00950000182995.e.b.`b ENSGT00530000063631.a.k ENSGT00500000044921.a ENSGT00510000047245 ENSGT00940000165758 ENSGT00940000170872 ENSGT00940000159342.a ENSGT00940000172951 ENSGT00940000173140 ENSGT00940000156245.a.b #21 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000153253.a #24 ENSGT00530000063576.B.a.b ENSGT00390000005801 ENSGT00390000012916 ENSGT01030000234531.C ENSGT00390000018554 ENSGT00940000166127 ENSGT00390000003680.b ENSGT00950000183131.b.a ENSGT00390000007813 ENSGT00390000014242.k.d Indian medaka MODERN SPECIES 3 TRIB1 (ENSOMEG00000010903) lratd2a (ENSOMEG00000010918) fam91a1 (ENSOMEG00000011027) klhl38a (ENSOMEG00000011069) spire1a (ENSOMEG00000011380) ATP6V1C1 (ENSOMEG00000011507) azin1b (ENSOMEG00000011535) ggcta (ENSOMEG00000011550) adnp2b (ENSOMEG00000011557) snrpd1 (ENSOMEG00000011571) ankib1a (ENSOMEG00000011610) ENSOMEG00000011640 fam83hb (ENSOMEG00000000980) ENSOMEG00000011737 rbm24a (ENSOMEG00000011760) #21 cap2 (ENSOMEG00000011812) #22 ENSOMEG00000011828 vps28 (ENSOMEG00000011875) mapk15 (ENSOMEG00000011951) grinaa (ENSOMEG00000011998) nup153 (ENSOMEG00000012062) #24 PTDSS1 (ENSOMEG00000012089) mterf3 (ENSOMEG00000012111) uqcrb (ENSOMEG00000012157) lrrc14b (ENSOMEG00000012183) gatad1 (ENSOMEG00000012207) chrac1 (ENSOMEG00000012231) pip4p2 (ENSOMEG00000000309) necab1 (ENSOMEG00000000313) tmem64 (ENSOMEG00000012325) tdp2b (ENSOMEG00000012347) Japanese Medaka HdrR MODERN SPECIES 2 lratd2a (ENSORLG00000012339) fam91a1 (ENSORLG00000012371) klhl38a (ENSORLG00000012386) spire1a (ENSORLG00000012450) ENSORLG00000027834 ATP6V1C1 (ENSORLG00000029501) azin1b (ENSORLG00000012474) adnp2b (ENSORLG00000012484) ggcta (ENSORLG00000012505) snrpd1 (ENSORLG00000012516) ankib1a (ENSORLG00000012526) ENSORLG00000025376 fam83hb (ENSORLG00000029070) ENSORLG00000024753 rbm24a (ENSORLG00000012546) #21 cap2 (ENSORLG00000012596) #22 ENSORLG00000022650 vps28 (ENSORLG00000012615) mapk15 (ENSORLG00000012626) grinaa (ENSORLG00000012640) nup153 (ENSORLG00000012674) #24 PTDSS1 (ENSORLG00000012684) mterf3 (ENSORLG00000012689) uqcrb (ENSORLG00000012697) lrrc14b (ENSORLG00000012707) gatad1 (ENSORLG00000012716) chrac1 (ENSORLG00000012724) pip4p2 (ENSORLG00000012754) necab1 (ENSORLG00000012788) tmem64 (ENSORLG00000029778) tdp2b (ENSORLG00000012815) Chinese medaka MODERN SPECIES 13 lratd2a (ENSOSIG00000005835) fam91a1 (ENSOSIG00000005825) klhl38a (ENSOSIG00000005813) spire1a (ENSOSIG00000005680) ENSOSIG00000005661 ATP6V1C1 (ENSOSIG00000005638) azin1b (ENSOSIG00000005629) adnp2b (ENSOSIG00000005625) ggcta (ENSOSIG00000005623) snrpd1 (ENSOSIG00000005618) ankib1a (ENSOSIG00000005608) ENSOSIG00000005605 fam83hb (ENSOSIG00000005603) ENSOSIG00000005599 rbm24a (ENSOSIG00000005598) #21 cap2 (ENSOSIG00000005404) #22 ENSOSIG00000005395 vps28 (ENSOSIG00000005394) mapk15 (ENSOSIG00000005390) grinaa (ENSOSIG00000005388) nup153 (ENSOSIG00000005384) #24 PTDSS1 (ENSOSIG00000003300) mterf3 (ENSOSIG00000003264) lrrc14b (ENSOSIG00000003261) gatad1 (ENSOSIG00000003257) chrac1 (ENSOSIG00000003251) pip4p2 (ENSOSIG00000003246) necab1 (ENSOSIG00000003207) tmem64 (ENSOSIG00000003193) tdp2b (ENSOSIG00000003188) acot13 (ENSOSIG00000003184) Pinecone sodierfish MODERN SPECIES 2 acot13 (ENSMMDG00005001957) tdp2b (ENSMMDG00005001963) tmem64 (ENSMMDG00005001966) necab1 (ENSMMDG00005001968) pip4p2 (ENSMMDG00005001973) chrac1 (ENSMMDG00005001976) gatad1 (ENSMMDG00005001977) ENSMMDG00005001981 lrrc14b (ENSMMDG00005001986) uqcrb (ENSMMDG00005001988) mterf3 (ENSMMDG00005001991) PTDSS1 (ENSMMDG00005002003) cdk9 (ENSMMDG00005002042) nup153 (ENSMMDG00005002049) #24 rbm24a (ENSMMDG00005002056) #21 cap2 (ENSMMDG00005002094) #22 ENSMMDG00005003225 vps28 (ENSMMDG00005003231) mapk15 (ENSMMDG00005003242) grinaa (ENSMMDG00005003246) ENSMMDG00005003254 ENSMMDG00005003260 ankib1a (ENSMMDG00005003270) snrpd1 (ENSMMDG00005003280) ggcta (ENSMMDG00005003289) adnp2b (ENSMMDG00005003300) azin1b (ENSMMDG00005003306) ATP6V1C1 (ENSMMDG00005003318) ENSMMDG00005003367 spire1a (ENSMMDG00005003386) klhl38a (ENSMMDG00005003438) Cod MODERN SPECIES 14 gmnn (ENSGMOG00000008149) zgc:111986 (ENSGMOG00000008492) acot13 (ENSGMOG00000008490) tdp2b (ENSGMOG00000008484) tmem64 (ENSGMOG00000028951) necab1 (ENSGMOG00000008477) pip4p2 (ENSGMOG00000008474) ENSGMOG00000034179 gatad1 (ENSGMOG00000010517) lrrc14b (ENSGMOG00000010513) uqcrb (ENSGMOG00000010509) mterf3 (ENSGMOG00000010492) PTDSS1 (ENSGMOG00000010473) ENSGMOG00000010422 #24 rbm24a (ENSGMOG00000028066) #21 cap2 (ENSGMOG00000010398) #22 ENSGMOG00000028269 vps28 (ENSGMOG00000010385) mapk15 (ENSGMOG00000010365) grinaa (ENSGMOG00000029154) ENSGMOG00000022827 ENSGMOG00000027363 ENSGMOG00000028024 ENSGMOG00000026596 CDK6 (ENSGMOG00000015380) hepacam2 (ENSGMOG00000013880) VPS50 (ENSGMOG00000008792) CALCR (ENSGMOG00000002241) ENSGMOG00000028572 tfpi2 (ENSGMOG00000010149) ENSGMOG00000032903 Osteoglossiformes ANCESTRAL SPECIES 6 ENSGT00940000157751 #27 ENSGT00390000014274 ENSGT00390000015518 ENSGT00940000155807.b ENSGT00940000158616 ENSGT00390000018560.a.a.a.a.b ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 ENSGT00390000005801 ENSGT00530000063576.B.a.b ENSGT00940000157508 #25 ENSGT00940000153253.a #24 ENSGT00940000156245.a.b #21 ENSGT01030000236049 ENSGT00390000017955.d #22 ENSGT00990000203802 ENSGT00390000007486 ENSGT00940000159758 ENSGT01050000244890.a.a.a.g ENSGT00940000170761 ENSGT00950000183094.b.b ENSGT00510000049601 ENSGT00940000154807.a.b.b ENSGT00940000154896 ENSGT00940000158906.j ENSGT00390000018531 ENSGT00390000000118 ENSGT00940000155602 ENSGT00800000125328 ENSGT00390000011295.b Asian bonytongue MODERN SPECIES 15 DPY19L4 (ENSSFOG00015010209) KDM1B (ENSSFOG00015010330) #27 CFAP69 (ENSSFOG00015010420) olah (ENSSFOG00015010441) zgc:110269 (ENSSFOG00015010487) slc9a3.2 (ENSSFOG00015010566) scn1bb (ENSSFOG00015010635) ENSSFOG00015010658 lrrc14b (ENSSFOG00015010690) uqcrb (ENSSFOG00015024352) mterf3 (ENSSFOG00015010739) PTDSS1 (ENSSFOG00015010744) KIF13A (ENSSFOG00015010843) #25 nup153 (ENSSFOG00015011040) #24 rbm24a (ENSSFOG00015028251) #21 cap2 (ENSSFOG00015011129) #22 ENSSFOG00015031138 vps28 (ENSSFOG00015030361) mapk15 (ENSSFOG00015011207) grinaa (ENSSFOG00015011223) ENSSFOG00015011253 RPRD1A (ENSSFOG00015011279) gstr (ENSSFOG00015011317) ENSSFOG00015011338 ENSSFOG00015011364 slc6a19b (ENSSFOG00015011455) slc6a19b (ENSSFOG00015011674) SLC6A19 (ENSSFOG00015011737) SLC6A19 (ENSSFOG00015012005) slc6a18 (ENSSFOG00015012044) tert (ENSSFOG00015012121) P. kingsleyae MODERN SPECIES 421 KIF13A (ENSPKIG00000001800) #25 nup153 (ENSPKIG00000001734) #24 rbm24a (ENSPKIG00000001701) #21 ENSPKIG00000001682 cap2 (ENSPKIG00000001661) #22 ENSPKIG00000001645 vps28 (ENSPKIG00000001607) thbs3b (ENSPKIG00000001460) txnipa (ENSPKIG00000001376) gatad2b (ENSPKIG00000001330) GNRHR (ENSPKIG00000001282) ENSPKIG00000001225 si:dkey-6i22.5 (ENSPKIG00000001164) ENSPKIG00000001138 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 649 gbp (ENSLOCG00000018330) DPY19L4 (ENSLOCG00000005956) ENSLOCG00000005972 ENSLOCG00000006002 GALNT15 (ENSLOCG00000006018) ANKRD28 (ENSLOCG00000006030) btd (ENSLOCG00000006069) hacl1 (ENSLOCG00000006085) COLQ (ENSLOCG00000006099) plekha8 (ENSLOCG00000006111) fkbp14 (ENSLOCG00000006139) WIPF3 (ENSLOCG00000006162) ENSLOCG00000018331 CHN2 (ENSLOCG00000006208) rbm24b (ENSLOCG00000006244) #21 ENSLOCG00000006274 #22 ENSLOCG00000006294 #22 ENSLOCG00000006314 #20 ENSLOCG00000006333 nagpa (ENSLOCG00000006341) tp53inp1 (ENSLOCG00000006359) ccne2 (ENSLOCG00000006388) ints8 (ENSLOCG00000006404) oxnad1 (ENSLOCG00000006425) RFTN1 (ENSLOCG00000006436) dazl (ENSLOCG00000006452) PLCL2 (ENSLOCG00000006475) tbc1d5 (ENSLOCG00000006501) satb1a (ENSLOCG00000006524) KCNH8 (ENSLOCG00000006545) efhb (ENSLOCG00000006567) Elephant shark MODERN SPECIES 1589 RBM24 (ENSCMIG00000007831) #21 cap2 (ENSCMIG00000007876) #22 fam8a1b (ENSCMIG00000008028) #23 ENSCMIG00000008030 ENSCMIG00000008033 NUP153 (ENSCMIG00000008057) #24 KIF13A (ENSCMIG00000008223) #25 NHLRC1 (ENSCMIG00000008620) tpmt (ENSCMIG00000008622) #26 KDM1B (ENSCMIG00000008637) #27 DEK (ENSCMIG00000008656) #28 RNF144B (ENSCMIG00000008659) #29 MBOAT1 (ENSCMIG00000008671) #31 E2F3 (ENSCMIG00000008705) #32 CDKAL1 (ENSCMIG00000008722) #33 sox4b (ENSCMIG00000008753) #35 nrsn1 (ENSCMIG00000008755) Gnathostomata ANCESTRAL SPECIES 1264 ENSGT00390000017955.c ##22 ENSGT00940000156790 Euteleostomi ANCESTRAL SPECIES 112 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT00940000157491 ENSGT00940000155272 ENSGT00940000155824.C ENSGT00390000002919 Sarcopterygii ANCESTRAL SPECIES 70 ENSGT00940000158352 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT00940000155272 ENSGT00940000155824.C ENSGT00390000002919 ENSGT00950000182995.e.a.b Tetrapoda ANCESTRAL SPECIES 4 ENSGT00950000182995.e.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c Amniota ANCESTRAL SPECIES 35 ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 Mammalia ANCESTRAL SPECIES 19 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00940000162741 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000158669 Theria ANCESTRAL SPECIES 36 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000160023 ENSGT01070000253744.a.a.b.a ENSGT00940000155722 ENSGT00980000198702 ENSGT00940000161782 ENSGT00940000160103 Marsupialia ANCESTRAL SPECIES 10 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00940000178388 ENSGT00390000015214.w ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000160023 ENSGT00940000155722 ENSGT00980000198702 ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000162194 Marsupialia_b ANCESTRAL SPECIES 4 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.w ENSGT00390000015214.x ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000160023 ENSGT00940000155722 ENSGT00980000198702 ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000162194 Diprotodontia ANCESTRAL SPECIES 3 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.w ENSGT00390000015214.x ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000160023 ENSGT00940000155722 ENSGT00980000198702 ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000162194 Diprotodontia_a ANCESTRAL SPECIES 4 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.w ENSGT00390000015214.x ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00940000160023 ENSGT00940000155722.k ENSGT00980000198702 ENSGT00940000161782 ENSGT00940000160103 ENSGT00940000162194 Common wonbat MODERN SPECIES 1014 ENSVURG00010002524 RHBDL2 (ENSVURG00010002516) AKIRIN1 (ENSVURG00010002475) NDUFS5 (ENSVURG00010002462) MACF1 (ENSVURG00010002288) ENSVURG00010002262 PPIE (ENSVURG00010002243) PABPC4 (ENSVURG00010002229) HEYL (ENSVURG00010002224) NT5C1A (ENSVURG00010002203) ENSVURG00010002167 ENSVURG00010002142 ENSVURG00010002124 MYCL (ENSVURG00010002118) MFSD2A (ENSVURG00010002108) CAP1 (ENSVURG00010002032) ##22 PPT1 (ENSVURG00010002003) RLF (ENSVURG00010001989) ENSVURG00010001972 ZMPSTE24 (ENSVURG00010001947) COL9A2 (ENSVURG00010001881) SMAP2 (ENSVURG00010001866) RIMS3 (ENSVURG00010001849) NFYC (ENSVURG00010001799) KCNQ4 (ENSVURG00010001636) TINAGL1 (ENSVURG00010001605) ENSVURG00010001594 ENSVURG00010001579 ENSVURG00010001545 ADGRB2 (ENSVURG00010000920) PTP4A2 (ENSVURG00010000845) koala MODERN SPECIES 14 ENSPCIG00000024472 RHBDL2 (ENSPCIG00000024471) AKIRIN1 (ENSPCIG00000024469) ENSPCIG00000024467 MACF1 (ENSPCIG00000021470) ENSPCIG00000021415 PPIE (ENSPCIG00000021413) PABPC4 (ENSPCIG00000020674) HEYL (ENSPCIG00000032718) NT5C1A (ENSPCIG00000020671) ENSPCIG00000020669 ENSPCIG00000020667 TRIT1 (ENSPCIG00000020666) MYCL (ENSPCIG00000020665) MFSD2A (ENSPCIG00000020664) CAP1 (ENSPCIG00000020662) ##22 PPT1 (ENSPCIG00000020661) ENSPCIG00000020660 RLF (ENSPCIG00000032935) ENSPCIG00000020658 ZMPSTE24 (ENSPCIG00000020656) SMAP2 (ENSPCIG00000020653) RIMS3 (ENSPCIG00000020652) NFYC (ENSPCIG00000020649) KCNQ4 (ENSPCIG00000014308) TINAGL1 (ENSPCIG00000020646) ENSPCIG00000020642 ENSPCIG00000036838 ADGRB2 (ENSPCIG00000020843) ENSPCIG00000020630 PTP4A2 (ENSPCIG00000020627) Wallaby MODERN SPECIES 3684 CAP1 (ENSMEUG00000004960) ##22 PPT1 (ENSMEUG00000004982) Tasmanian devil MODERN SPECIES 2 ENSSHAG00000027443 RHBDL2 (ENSSHAG00000017389) AKIRIN1 (ENSSHAG00000017487) MACF1 (ENSSHAG00000017549) ENSSHAG00000022489 ENSSHAG00000020938 PABPC4 (ENSSHAG00000018139) HEYL (ENSSHAG00000018213) NT5C1A (ENSSHAG00000018265) ENSSHAG00000031508 ENSSHAG00000018329 ENSSHAG00000027288 ENSSHAG00000022663 ENSSHAG00000018449 ENSSHAG00000004229 CAP1 (ENSSHAG00000001626) ##22 PPT1 (ENSSHAG00000002339) RLF (ENSSHAG00000005088) ZMPSTE24 (ENSSHAG00000006392) ENSSHAG00000007143 SMAP2 (ENSSHAG00000007665) RIMS3 (ENSSHAG00000032120) NFYC (ENSSHAG00000009190) ENSSHAG00000009630 ENSSHAG00000028220 ENSSHAG00000010460 COL16A1 (ENSSHAG00000010645) ADGRB2 (ENSSHAG00000011480) ENSSHAG00000003434 PTP4A2 (ENSSHAG00000024595) KHDRBS1 (ENSSHAG00000007106) Opossum MODERN SPECIES 3 RRAGC (ENSMODG00000017710) MYCBP (ENSMODG00000038621) RHBDL2 (ENSMODG00000047333) ENSMODG00000017703 ENSMODG00000048410 MACF1 (ENSMODG00000017689) ENSMODG00000017664 PPIE (ENSMODG00000017659) PABPC4 (ENSMODG00000017657) ENSMODG00000017653 ENSMODG00000017652 ENSMODG00000017650 TRIT1 (ENSMODG00000041050) ENSMODG00000017647 MFSD2A (ENSMODG00000017646) CAP1 (ENSMODG00000017643) ##22 PPT1 (ENSMODG00000017638) RLF (ENSMODG00000017631) ENSMODG00000017626 ZMPSTE24 (ENSMODG00000017624) COL9A2 (ENSMODG00000017617) SMAP2 (ENSMODG00000017597) RIMS3 (ENSMODG00000017587) NFYC (ENSMODG00000017585) KCNQ4 (ENSMODG00000017582) TINAGL1 (ENSMODG00000028729) PEF1 (ENSMODG00000017573) ENSMODG00000040929 ENSMODG00000017556 PTP4A2 (ENSMODG00000017554) ENSMODG00000017551 Eutheria ANCESTRAL SPECIES ENSGT00940000155824.C ENSGT00730000111729 ENSGT00980000198642 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Boreoeutheria ANCESTRAL SPECIES ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Laurasiatheria ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Artiodactyla ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Suina ANCESTRAL SPECIES 27 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Pig MODERN SPECIES 14 ENSSSCG00000034367 ENSSSCG00000003655 ENSSSCG00000036451 ENSSSCG00000032082 ENSSSCG00000003666 ENSSSCG00000029705 PABPC4 (ENSSSCG00000003660) HEYL (ENSSSCG00000038956) NT5C1A (ENSSSCG00000003662) HPCAL4 (ENSSSCG00000023460) ENSSSCG00000003664 ENSSSCG00000037514 TRIT1 (ENSSSCG00000003667) ENSSSCG00000039761 MFSD2A (ENSSSCG00000003669) CAP1 (ENSSSCG00000003672) ##22 PPT1 (ENSSSCG00000036673) RLF (ENSSSCG00000003670) TMCO2 (ENSSSCG00000036395) ZMPSTE24 (ENSSSCG00000027902) ENSSSCG00000023322 MC2R (ENSSSCG00000039227) MC5R (ENSSSCG00000028411) RNMT (ENSSSCG00000025855) FAM210A (ENSSSCG00000058331) LDLRAD4 (ENSSSCG00000027417) CEP192 (ENSSSCG00000059665) SEH1L (ENSSSCG00000003673) PTPN2 (ENSSSCG00000021738) ENSSSCG00000031730 CEP76 (ENSSSCG00000027007) Chacoan peccary MODERN SPECIES 54 TRIT1 (ENSCWAG00000013773) MYCL (ENSCWAG00000013677) MFSD2A (ENSCWAG00000013374) CAP1 (ENSCWAG00000013235) ##22 PPT1 (ENSCWAG00000013154) RLF (ENSCWAG00000013118) TMCO2 (ENSCWAG00000013076) ZMPSTE24 (ENSCWAG00000013036) COL9A2 (ENSCWAG00000012744) SMAP2 (ENSCWAG00000012703) ZFP69B (ENSCWAG00000012643) ZFP69 (ENSCWAG00000012581) EXO5 (ENSCWAG00000012561) ZNF684 (ENSCWAG00000012539) ENSCWAG00000012478 RIMS3 (ENSCWAG00000012432) NFYC (ENSCWAG00000012236) KCNQ4 (ENSCWAG00000011931) CITED4 (ENSCWAG00000011903) Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Camelidae ANCESTRAL SPECIES 3 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00730000111729 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 Arabian camel MODERN SPECIES 4 MACF1 (ENSCDRG00005011193) ENSCDRG00005012015 ENSCDRG00005012033 ENSCDRG00005012058 ENSCDRG00005012115 PABPC4 (ENSCDRG00005012184) HEYL (ENSCDRG00005012353) NT5C1A (ENSCDRG00005012419) HPCAL4 (ENSCDRG00005012456) PPIE (ENSCDRG00005012507) ENSCDRG00005012658 ENSCDRG00005012813 TRIT1 (ENSCDRG00005012882) MYCL (ENSCDRG00005013289) MFSD2A (ENSCDRG00005013329) CAP1 (ENSCDRG00005013432) ##22 PPT1 (ENSCDRG00005013620) RLF (ENSCDRG00005013887) TMCO2 (ENSCDRG00005013941) ZMPSTE24 (ENSCDRG00005013984) ENSCDRG00005014109 SMAP2 (ENSCDRG00005014239) ZFP69B (ENSCDRG00005014292) ZFP69 (ENSCDRG00005014364) ZNF684 (ENSCDRG00005014415) RIMS3 (ENSCDRG00005014464) NFYC (ENSCDRG00005014542) KCNQ4 (ENSCDRG00005014732) CITED4 (ENSCDRG00005014841) CTPS1 (ENSCDRG00005014862) SLFNL1 (ENSCDRG00005014975) Alpaca MODERN SPECIES 434 TRIT1 (ENSVPAG00000003008) ENSVPAG00000003009 CAP1 (ENSVPAG00000003013) ##22 PPT1 (ENSVPAG00000003014) RLF (ENSVPAG00000003020) TMCO2 (ENSVPAG00000003021) ZMPSTE24 (ENSVPAG00000003023) ENSVPAG00000003024 SMAP2 (ENSVPAG00000003026) ZFP69B (ENSVPAG00000003027) ZFP69 (ENSVPAG00000003028) ZNF684 (ENSVPAG00000003031) RIMS3 (ENSVPAG00000003033) NFYC (ENSVPAG00000003034) Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Pecora ANCESTRAL SPECIES 2 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Yarkand deer MODERN SPECIES 12 RRAGC (ENSCHYG00000026668) ENSCHYG00000026657 GJA9 (ENSCHYG00000026651) RHBDL2 (ENSCHYG00000026637) ENSCHYG00000026593 ENSCHYG00000026566 MACF1 (ENSCHYG00000019881) ENSCHYG00000019106 HEYL (ENSCHYG00000018992) NT5C1A (ENSCHYG00000018911) HPCAL4 (ENSCHYG00000018782) PPIE (ENSCHYG00000018625) TRIT1 (ENSCHYG00000018136) MYCL (ENSCHYG00000018013) MFSD2A (ENSCHYG00000017841) CAP1 (ENSCHYG00000017634) ##22 PPT1 (ENSCHYG00000017225) RLF (ENSCHYG00000017117) TMCO2 (ENSCHYG00000017083) ZMPSTE24 (ENSCHYG00000017010) COL9A2 (ENSCHYG00000016349) SMAP2 (ENSCHYG00000016181) ZFP69B (ENSCHYG00000015997) ZFP69 (ENSCHYG00000015853) EXO5 (ENSCHYG00000015822) ZNF684 (ENSCHYG00000015737) ENSCHYG00000015713 RIMS3 (ENSCHYG00000015596) NFYC (ENSCHYG00000015029) KCNQ4 (ENSCHYG00000014554) CITED4 (ENSCHYG00000014495) Percora_a ANCESTRAL SPECIES 1 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Siberian musk deer MODERN SPECIES 341 ENSMMSG00000006152 HPCAL4 (ENSMMSG00000006130) NT5C1A (ENSMMSG00000006118) HEYL (ENSMMSG00000006102) ENSMMSG00000006072 ENSMMSG00000006054 ENSMMSG00000006028 ENSMMSG00000006010 ENSMMSG00000005998 ENSMMSG00000005898 TRIT1 (ENSMMSG00000005816) MYCL (ENSMMSG00000005769) MFSD2A (ENSMMSG00000005706) CAP1 (ENSMMSG00000005620) ##22 PPT1 (ENSMMSG00000005470) ENSMMSG00000005421 RLF (ENSMMSG00000005369) ZMPSTE24 (ENSMMSG00000005324) COL9A2 (ENSMMSG00000005256) TMCO2 (ENSMMSG00000005220) SMAP2 (ENSMMSG00000005092) ZFP69 (ENSMMSG00000005053) EXO5 (ENSMMSG00000005044) ENSMMSG00000005033 RIMS3 (ENSMMSG00000005005) NFYC (ENSMMSG00000004890) KCNQ4 (ENSMMSG00000004723) CITED4 (ENSMMSG00000004673) CTPS1 (ENSMMSG00000004591) Bovidae ANCESTRAL SPECIES 1 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788.nb.a ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000154788.nb.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Caprinae ANCESTRAL SPECIES 2 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00730000111729 ENSGT00940000155272.j ENSGT00940000154788.nb.a ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.i ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Goat DUPLICATION Goat MODERN SPECIES 22 MACF1 (ENSCHIG00000008154) ENSCHIG00000001374 ENSCHIG00000021022 ENSCHIG00000012300 ENSCHIG00000023905 ENSCHIG00000019398 HEYL (ENSCHIG00000013434) NT5C1A (ENSCHIG00000026840) HPCAL4 (ENSCHIG00000017598) ENSCHIG00000012509 ENSCHIG00000025198 ENSCHIG00000019430 TRIT1 (ENSCHIG00000013259) MYCL (ENSCHIG00000017111) MFSD2A (ENSCHIG00000005567) ENSCHIG00000021156 ##22 PPT1 (ENSCHIG00000024964) RLF (ENSCHIG00000008734) TMCO2 (ENSCHIG00000020895) ZMPSTE24 (ENSCHIG00000014367) SMAP2 (ENSCHIG00000026204) ENSCHIG00000001509 ZFP69 (ENSCHIG00000008554) EXO5 (ENSCHIG00000007542) ZNF684 (ENSCHIG00000014482) ENSCHIG00000018474 RIMS3 (ENSCHIG00000008574) NFYC (ENSCHIG00000021122) KCNQ4 (ENSCHIG00000014613) CITED4 (ENSCHIG00000013877) CTPS1 (ENSCHIG00000026631) Goat MODERN SPECIES 25 PKD2 (ENSCHIG00000020340) ABCG2 (ENSCHIG00000026645) PPM1K (ENSCHIG00000015686) HERC6 (ENSCHIG00000022954) HERC5 (ENSCHIG00000009824) ENSCHIG00000008447 ENSCHIG00000009740 NAP1L5 (ENSCHIG00000020207) HERC3 (ENSCHIG00000010034) FAM13A (ENSCHIG00000016328) ENSCHIG00000026567 ENSCHIG00000024343 TIGD2 (ENSCHIG00000008747) GPRIN3 (ENSCHIG00000008090) SNCA (ENSCHIG00000012331) ENSCHIG00000013599 ##22 MMRN1 (ENSCHIG00000022636) CCSER1 (ENSCHIG00000019553) ENSCHIG00000000698 GRID2 (ENSCHIG00000020528) ATOH1 (ENSCHIG00000011106) ENSCHIG00000014271 SMARCAD1 (ENSCHIG00000012905) HPGDS (ENSCHIG00000022190) PDLIM5 (ENSCHIG00000008891) BMPR1B (ENSCHIG00000017761) UNC5C (ENSCHIG00000007694) PDHA2 (ENSCHIG00000008223) ENSCHIG00000013187 STPG2 (ENSCHIG00000014643) RAP1GDS1 (ENSCHIG00000013239) Rambouillet Sheep MODERN SPECIES AKIRIN1 (ENSOARG00020017964) NDUFS5 (ENSOARG00020018138) MACF1 (ENSOARG00020018731) ENSOARG00020025841 ENSOARG00020025845 ENSOARG00020025851 PABPC4 (ENSOARG00020025866) HEYL (ENSOARG00020025898) NT5C1A (ENSOARG00020025901) HPCAL4 (ENSOARG00020025905) PPIE (ENSOARG00020025915) ENSOARG00020025927 TRIT1 (ENSOARG00020025939) ENSOARG00020025955 MFSD2A (ENSOARG00020025960) CAP1 (ENSOARG00020025969) ##22 PPT1 (ENSOARG00020025978) ENSOARG00020025995 RLF (ENSOARG00020025999) TMCO2 (ENSOARG00020026004) ZMPSTE24 (ENSOARG00020026009) COL9A2 (ENSOARG00020026019) SMAP2 (ENSOARG00020026036) ZFP69 (ENSOARG00020026052) EXO5 (ENSOARG00020000039) ZNF684 (ENSOARG00020000044) ENSOARG00020000045 RIMS3 (ENSOARG00020000046) NFYC (ENSOARG00020000047) KCNQ4 (ENSOARG00020000050) CITED4 (ENSOARG00020000054) Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES ENSGT00390000017955.c.c ##22 Bos ANCESTRAL SPECIES ENSGT00390000017955.c.c ##22 Bos_a ANCESTRAL SPECIES ENSGT00390000017955.c.c ##22 Wild yak MODERN SPECIES 780 ENOX1 (ENSBMUG00000007790) CCDC122 (ENSBMUG00000007806) LACC1 (ENSBMUG00000007815) SMIM2 (ENSBMUG00000007820) SERP2 (ENSBMUG00000007835) TSC22D1 (ENSBMUG00000007849) NUFIP1 (ENSBMUG00000007872) ENSBMUG00000007885 ENSBMUG00000007897 ##22 Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 1 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788.nb.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.d.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00960000189866 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Bos ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788.nb.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.d.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT01050000245142 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000167707 ENSGT00960000189866 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 Bos_b ANCESTRAL SPECIES 1 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272.l ENSGT00940000154788.nb.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.k ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.d.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT01050000245142 ENSGT00390000002053 ENSGT00940000158387 ENSGT00940000167707 ENSGT00960000189866 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 Hybrid Bos Indicus MODERN SPECIES 22 RHBDL2 (ENSBIXG00005028704) AKIRIN1 (ENSBIXG00005028804) NDUFS5 (ENSBIXG00005005003) MACF1 (ENSBIXG00005029161) ENSBIXG00005029230 ENSBIXG00005001557 HEYL (ENSBIXG00005001536) NT5C1A (ENSBIXG00005030444) HPCAL4 (ENSBIXG00005030438) PPIE (ENSBIXG00005030424) ENSBIXG00005030409 ENSBIXG00005030403 TRIT1 (ENSBIXG00005030335) MYCL (ENSBIXG00005030301) MFSD2A (ENSBIXG00005030283) ENSBIXG00005030267 ##22 PPT1 (ENSBIXG00005030230) RLF (ENSBIXG00005030215) TMCO2 (ENSBIXG00005030206) ENSBIXG00005030197 ZMPSTE24 (ENSBIXG00005030180) ENSBIXG00005030126 SMAP2 (ENSBIXG00005030073) ENSBIXG00005030050 ENSBIXG00005030028 ZFP69 (ENSBIXG00005030017) EXO5 (ENSBIXG00005030004) ZNF684 (ENSBIXG00005029992) ENSBIXG00005029984 RIMS3 (ENSBIXG00005029960) NFYC (ENSBIXG00005029894) Cow MODERN SPECIES 22 AKIRIN1 (ENSBTAG00000004715) NDUFS5 (ENSBTAG00000010232) ENSBTAG00000053378 MACF1 (ENSBTAG00000021024) BMP8A (ENSBTAG00000050691) PABPC4 (ENSBTAG00000017125) HEYL (ENSBTAG00000008688) NT5C1A (ENSBTAG00000002983) HPCAL4 (ENSBTAG00000014538) PPIE (ENSBTAG00000047314) ENSBTAG00000053451 ENSBTAG00000031600 TRIT1 (ENSBTAG00000013832) MYCL (ENSBTAG00000054059) MFSD2A (ENSBTAG00000013054) CAP1 (ENSBTAG00000013363) ##22 PPT1 (ENSBTAG00000013367) RLF (ENSBTAG00000019695) TMCO2 (ENSBTAG00000019698) ZMPSTE24 (ENSBTAG00000044178) SMAP2 (ENSBTAG00000021922) ENSBTAG00000054444 ZFP69 (ENSBTAG00000039287) EXO5 (ENSBTAG00000000532) ZNF684 (ENSBTAG00000000533) ENSBTAG00000034332 RIMS3 (ENSBTAG00000018726) NFYC (ENSBTAG00000021943) KCNQ4 (ENSBTAG00000002644) CITED4 (ENSBTAG00000015113) CTPS1 (ENSBTAG00000001626) Bos_a ANCESTRAL SPECIES 1 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788.nb.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.d.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT01050000245142 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000167707 ENSGT00960000189866 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 Domestic yak MODERN SPECIES 22 RHBDL2 (ENSBGRG00000005216) AKIRIN1 (ENSBGRG00000005084) MACF1 (ENSBGRG00000001404) ENSBGRG00000001003 ##34 ENSBGRG00000000845 HEYL (ENSBGRG00000000802) NT5C1A (ENSBGRG00000000790) HPCAL4 (ENSBGRG00000000777) PPIE (ENSBGRG00000000726) OXCT2 (ENSBGRG00000000695) ENSBGRG00000000664 ENSBGRG00000000655 TRIT1 (ENSBGRG00000000546) MYCL (ENSBGRG00000000513) MFSD2A (ENSBGRG00000000405) ENSBGRG00000000339 ##22 ENSBGRG00000000267 RLF (ENSBGRG00000000236) TMCO2 (ENSBGRG00000000230) ENSBGRG00000018213 ZMPSTE24 (ENSBGRG00000017914) COL9A2 (ENSBGRG00000017451) SMAP2 (ENSBGRG00000017114) ENSBGRG00000017070 ##34 ZFP69 (ENSBGRG00000017030) EXO5 (ENSBGRG00000017012) ZNF684 (ENSBGRG00000016941) ENSBGRG00000016909 RIMS3 (ENSBGRG00000016850) NFYC (ENSBGRG00000016660) KCNQ4 (ENSBGRG00000016298) Wild yak MODERN SPECIES 1716 PPIE (ENSBMUG00000024054) ENSBMUG00000023995 ENSBMUG00000023989 ENSBMUG00000023965 TRIT1 (ENSBMUG00000023957) MYCL (ENSBMUG00000023911) MFSD2A (ENSBMUG00000023897) ENSBMUG00000023863 ##22 ENSBMUG00000023846 ENSBMUG00000023831 American bison MODERN SPECIES 3342 NDUFS5 (ENSBBBG00000001473) ENSBBBG00000009364 MACF1 (ENSBBBG00000009386) ENSBBBG00000009391 ENSBBBG00000009395 HEYL (ENSBBBG00000009396) NT5C1A (ENSBBBG00000009398) HPCAL4 (ENSBBBG00000009399) PPIE (ENSBBBG00000009404) ENSBBBG00000001488 ENSBBBG00000009408 ENSBBBG00000009409 TRIT1 (ENSBBBG00000009411) MYCL (ENSBBBG00000001492) MFSD2A (ENSBBBG00000009417) ENSBBBG00000008895 ##22 PPT1 (ENSBBBG00000009427) RLF (ENSBBBG00000001496) TMCO2 (ENSBBBG00000001497) ZMPSTE24 (ENSBBBG00000008896) COL9A2 (ENSBBBG00000001498) SMAP2 (ENSBBBG00000009431) ENSBBBG00000007872 ENSBBBG00000001499 ZFP69 (ENSBBBG00000001500) EXO5 (ENSBBBG00000001501) ZNF684 (ENSBBBG00000009434) ENSBBBG00000001503 RIMS3 (ENSBBBG00000009436) NFYC (ENSBBBG00000007388) KCNQ4 (ENSBBBG00000009444) Bovinae ANCESTRAL SPECIES 20 ENSGT00940000158106 ENSGT00940000153313.B ENSGT01070000253816.a.a.b ENSGT00940000154512.a ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00390000014262 ENSGT00940000162467.b ENSGT00940000163647 ENSGT00940000159144.B ENSGT00390000003758 ENSGT00390000012569.b ENSGT00390000017955.c.d.b ##22 ENSGT00390000016051.j ENSGT00940000159552 ENSGT00390000006051.a.a.a.a ENSGT00390000006051.a.b.a.a ENSGT00940000158961 ENSGT00390000015682 ENSGT00940000153655.A.a ENSGT00940000153137.a.b.b.a ENSGT00940000161772 ENSGT00730000111163 ENSGT00940000159160 ENSGT00950000183097.a.a.b ENSGT01100000263828.a.b ENSGT00710000106860 ENSGT00940000160585 Bos ANCESTRAL SPECIES 22 ENSGT00940000158106 ENSGT00940000153313.B ENSGT01070000253816.a.a.b ENSGT00940000154512.a ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00390000014262 ENSGT00940000162467.b ENSGT00940000163647 ENSGT00940000159144.B ENSGT00390000003758 ENSGT00390000012569.b ENSGT00390000017955.c.d.b ##22 ENSGT00390000016051.j ENSGT00940000159552 ENSGT00390000006051.a.a.a.a ENSGT00390000006051.a.a.a.b.a.a ENSGT00940000158961 ENSGT00390000015682 ENSGT00940000153655.A.a ENSGT00940000153137.a.b.b.a ENSGT00940000161772 ENSGT00730000111163 ENSGT00940000159160 ENSGT00950000183097.a.a.b ENSGT01100000263828.a.b ENSGT00710000106860 ENSGT00940000160585 Bos_b ANCESTRAL SPECIES 4 ENSGT00940000164406 ENSGT00940000158106 ENSGT00940000153313.B ENSGT01070000253816.a.a.b ENSGT00940000154512.a ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000162467.b ENSGT00940000163647 ENSGT00940000159144.B ENSGT00390000003758 ENSGT00390000012569.b ENSGT00390000017955.c.d.b ##22 ENSGT00390000016051.j ENSGT00940000159552 ENSGT00390000006051.a.a.a.a ENSGT00390000006051.a.a.a.b.a.a ENSGT00940000158961 ENSGT00390000015682 ENSGT00940000153655.A.a ENSGT00940000153137.a.b.b.a ENSGT00940000161772 ENSGT00730000111163 ENSGT00940000159160 ENSGT00950000183097.a.a.b ENSGT01100000263828.a.b ENSGT00710000106860 ENSGT00940000160585 Cow MODERN SPECIES 3 ENSBTAG00000053271 DGKH (ENSBTAG00000013879) AKAP11 (ENSBTAG00000014752) TNFSF11 (ENSBTAG00000008924) FAM216B (ENSBTAG00000003595) EPSTI1 (ENSBTAG00000019054) DNAJC15 (ENSBTAG00000034785) ENOX1 (ENSBTAG00000012434) CCDC122 (ENSBTAG00000034753) LACC1 (ENSBTAG00000016691) SERP2 (ENSBTAG00000051524) TSC22D1 (ENSBTAG00000047739) TSC22D1 (ENSBTAG00000046664) NUFIP1 (ENSBTAG00000009415) GPALPP1 (ENSBTAG00000009416) ENSBTAG00000045689 ##22 GTF2F2 (ENSBTAG00000034495) KCTD4 (ENSBTAG00000019416) TPT1 (ENSBTAG00000010156) SLC25A30 (ENSBTAG00000016529) COG3 (ENSBTAG00000017907) CBY2 (ENSBTAG00000018580) SIAH3 (ENSBTAG00000051729) ZC3H13 (ENSBTAG00000007067) ENSBTAG00000048402 CPB2 (ENSBTAG00000007073) LCP1 (ENSBTAG00000007079) ENSBTAG00000053178 LRRC63 (ENSBTAG00000015994) RUBCNL (ENSBTAG00000013371) LRCH1 (ENSBTAG00000002959) Hybrid Bos Indicus MODERN SPECIES 3 TNFSF11 (ENSBIXG00005004003) FAM216B (ENSBIXG00005023313) EPSTI1 (ENSBIXG00005003975) DNAJC15 (ENSBIXG00005023206) ENSBIXG00005023187 ENOX1 (ENSBIXG00005023147) ENSBIXG00005023104 CCDC122 (ENSBIXG00005003936) LACC1 (ENSBIXG00005023079) SMIM2 (ENSBIXG00005003927) ENSBIXG00005023019 ENSBIXG00005022931 TSC22D1 (ENSBIXG00005022881) NUFIP1 (ENSBIXG00005022767) ENSBIXG00005022737 ENSBIXG00005022705 ##22 GTF2F2 (ENSBIXG00005003886) KCTD4 (ENSBIXG00005003883) ENSBIXG00005007690 COG3 (ENSBIXG00005022513) ENSBIXG00005022372 CBY2 (ENSBIXG00005022348) SIAH3 (ENSBIXG00005003804) ZC3H13 (ENSBIXG00005022307) CPB2 (ENSBIXG00005022273) LCP1 (ENSBIXG00005022212) ENSBIXG00005022169 LRRC63 (ENSBIXG00005022158) RUBCNL (ENSBIXG00005006830) LRCH1 (ENSBIXG00005021912) ESD (ENSBIXG00005003676) Bos_a ANCESTRAL SPECIES 55 ENSGT00390000006601.i ENSGT00940000158106 ENSGT00940000153313.B ENSGT01070000253816.a.a.b ENSGT00940000154512.a ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00390000014262 ENSGT00940000162467.b ENSGT00940000159144.B ENSGT00390000003758 ENSGT00390000012569.b ENSGT00390000017955.c.d.b ##22 ENSGT00940000159552 ENSGT00390000016051.j ENSGT00940000158961 ENSGT00390000015682 ENSGT00940000153137.a.b.b.a ENSGT00940000161772 ENSGT00730000111163 ENSGT00940000159160 ENSGT00950000183097.a.a.b ENSGT00710000106860 ENSGT00940000160585 ENSGT00940000159528 ENSGT00390000011864.f ENSGT01050000244937.a.a ENSGT00390000010170.a.b Domestic yak MODERN SPECIES 6 AKAP11 (ENSBGRG00000005093) TNFSF11 (ENSBGRG00000005035) FAM216B (ENSBGRG00000004982) EPSTI1 (ENSBGRG00000004611) DNAJC15 (ENSBGRG00000004544) ENSBGRG00000004533 ENOX1 (ENSBGRG00000004490) CCDC122 (ENSBGRG00000004429) LACC1 (ENSBGRG00000004396) SMIM2 (ENSBGRG00000004347) ENSBGRG00000004322 TSC22D1 (ENSBGRG00000004147) ENSBGRG00000004099 NUFIP1 (ENSBGRG00000004055) ENSBGRG00000003939 ENSBGRG00000003862 ##22 KCTD4 (ENSBGRG00000003842) GTF2F2 (ENSBGRG00000003757) ENSBGRG00000023216 ENSBGRG00000023179 SLC25A30 (ENSBGRG00000023058) COG3 (ENSBGRG00000022627) CBY2 (ENSBGRG00000022527) SIAH3 (ENSBGRG00000022492) ZC3H13 (ENSBGRG00000022439) ENSBGRG00000022330 LCP1 (ENSBGRG00000022064) LRRC63 (ENSBGRG00000021956) RUBCNL (ENSBGRG00000021526) LRCH1 (ENSBGRG00000020993) ESD (ENSBGRG00000020909) American bison MODERN SPECIES 3259 ENSBBBG00000008639 DGKH (ENSBBBG00000008810) AKAP11 (ENSBBBG00000006197) TNFSF11 (ENSBBBG00000023782) FAM216B (ENSBBBG00000023767) EPSTI1 (ENSBBBG00000023757) DNAJC15 (ENSBBBG00000023717) ENOX1 (ENSBBBG00000023702) CCDC122 (ENSBBBG00000023682) LACC1 (ENSBBBG00000023676) SMIM2 (ENSBBBG00000023658) SERP2 (ENSBBBG00000023651) TSC22D1 (ENSBBBG00000023640) NUFIP1 (ENSBBBG00000023623) GPALPP1 (ENSBBBG00000023609) ENSBBBG00000023577 ##22 GTF2F2 (ENSBBBG00000006155) KCTD4 (ENSBBBG00000023540) ENSBBBG00000023536 ENSBBBG00000006147 ENSBBBG00000023504 COG3 (ENSBBBG00000006139) CBY2 (ENSBBBG00000023425) SIAH3 (ENSBBBG00000023409) ZC3H13 (ENSBBBG00000023395) CPB2 (ENSBBBG00000023366) LCP1 (ENSBBBG00000023329) ENSBBBG00000008966 LRRC63 (ENSBBBG00000023288) RUBCNL (ENSBBBG00000023250) LRCH1 (ENSBBBG00000023203) Cetacea ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788.ib.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.h.b ENSGT00390000009130.a.b ENSGT00940000155272.h.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Blue whale MODERN SPECIES ENSBMSG00010002830 ENSBMSG00010002837 ENSBMSG00010002847 ENSBMSG00010002858 ENSBMSG00010002892 HEYL (ENSBMSG00010002923) NT5C1A (ENSBMSG00010002931) HPCAL4 (ENSBMSG00010002948) ENSBMSG00010002967 ENSBMSG00010002978 ENSBMSG00010002990 ENSBMSG00010003005 ENSBMSG00010003020 MYCL (ENSBMSG00010003030) MFSD2A (ENSBMSG00010003050) CAP1 (ENSBMSG00010003102) ##22 PPT1 (ENSBMSG00010003133) RLF (ENSBMSG00010003196) TMCO2 (ENSBMSG00010003207) ZMPSTE24 (ENSBMSG00010003220) COL9A2 (ENSBMSG00010003237) SMAP2 (ENSBMSG00010009600) ENSBMSG00010009624 ENSBMSG00010009632 ZFP69 (ENSBMSG00010009643) EXO5 (ENSBMSG00010009654) ZNF684 (ENSBMSG00010009663) ENSBMSG00010009674 RIMS3 (ENSBMSG00010009686) NFYC (ENSBMSG00010009698) KCNQ4 (ENSBMSG00010009743) Odontoceti ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.h.b ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788.ib.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000155272.h.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Odontoceti_a ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.h.b ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788.ib.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Odontoceti_b ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.h.b ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788.ib.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000154732.r ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 Monodontidae ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.h.b ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788.ib.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000154732.r ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000016051.i ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 Narwhal MODERN SPECIES 304 MYCBP (ENSMMNG00015008524) GJA9 (ENSMMNG00015008510) RHBDL2 (ENSMMNG00015008493) AKIRIN1 (ENSMMNG00015008468) NDUFS5 (ENSMMNG00015008453) ENSMMNG00015008441 MACF1 (ENSMMNG00015007113) ENSMMNG00015006370 HEYL (ENSMMNG00015006307) NT5C1A (ENSMMNG00015006285) HPCAL4 (ENSMMNG00015006263) ENSMMNG00015006223 TRIT1 (ENSMMNG00015006142) MYCL (ENSMMNG00015006076) MFSD2A (ENSMMNG00015005948) CAP1 (ENSMMNG00015005895) ##22 PPT1 (ENSMMNG00015005839) RLF (ENSMMNG00015005790) TMCO2 (ENSMMNG00015005776) ZMPSTE24 (ENSMMNG00015005742) COL9A2 (ENSMMNG00015005714) ENSMMNG00015005687 SMAP2 (ENSMMNG00015005643) ZFP69B (ENSMMNG00015005594) ZFP69 (ENSMMNG00015005572) ZNF684 (ENSMMNG00015005545) ENSMMNG00015005529 RIMS3 (ENSMMNG00015005511) NFYC (ENSMMNG00015005483) KCNQ4 (ENSMMNG00015005375) CITED4 (ENSMMNG00015005346) Beluga whale MODERN SPECIES 74 NDUFS5 (ENSDLEG00000008851) MACF1 (ENSDLEG00000010769) ENSDLEG00000021368 ENSDLEG00000021370 ENSDLEG00000021372 PABPC4 (ENSDLEG00000021388) HEYL (ENSDLEG00000021494) NT5C1A (ENSDLEG00000021498) HPCAL4 (ENSDLEG00000021500) ENSDLEG00000021505 ENSDLEG00000021508 ENSDLEG00000021514 ENSDLEG00000021516 MYCL (ENSDLEG00000021520) MFSD2A (ENSDLEG00000021522) CAP1 (ENSDLEG00000021526) ##22 PPT1 (ENSDLEG00000021528) RLF (ENSDLEG00000021532) TMCO2 (ENSDLEG00000021535) ZMPSTE24 (ENSDLEG00000021536) COL9A2 (ENSDLEG00000021538) SMAP2 (ENSDLEG00000021539) ENSDLEG00000021541 ZFP69B (ENSDLEG00000021542) ZFP69 (ENSDLEG00000021544) EXO5 (ENSDLEG00000021545) ZNF684 (ENSDLEG00000021547) ENSDLEG00000021551 RIMS3 (ENSDLEG00000021553) NFYC (ENSDLEG00000021556) KCNQ4 (ENSDLEG00000021558) Vaquita MODERN SPECIES ENSPSNG00000019543 AKIRIN1 (ENSPSNG00000019597) NDUFS5 (ENSPSNG00000019668) ENSPSNG00000022132 ENSPSNG00000022141 ENSPSNG00000022154 ENSPSNG00000022176 HEYL (ENSPSNG00000022201) NT5C1A (ENSPSNG00000022210) HPCAL4 (ENSPSNG00000000004) ENSPSNG00000000009 ENSPSNG00000000013 TRIT1 (ENSPSNG00000000026) ENSPSNG00000000051 MFSD2A (ENSPSNG00000000074) CAP1 (ENSPSNG00000000118) ##22 PPT1 (ENSPSNG00000000185) RLF (ENSPSNG00000000213) TMCO2 (ENSPSNG00000000247) ZMPSTE24 (ENSPSNG00000000265) COL9A2 (ENSPSNG00000000303) SMAP2 (ENSPSNG00000000368) ENSPSNG00000000420 ZFP69B (ENSPSNG00000000443) ZFP69 (ENSPSNG00000000470) EXO5 (ENSPSNG00000000484) ZNF684 (ENSPSNG00000000492) ENSPSNG00000000535 ENSPSNG00000000577 RIMS3 (ENSPSNG00000000591) NFYC (ENSPSNG00000000678) Dolphin MODERN SPECIES 4455 CAP1 (ENSTTRG00000004358) ##22 PPT1 (ENSTTRG00000004339) Sperm whale DUPLICATION Sperm whale MODERN SPECIES 5 NPEPL1 (ENSPCTG00005019263) RAE1 (ENSPCTG00005019375) SPO11 (ENSPCTG00005019409) BMP7 (ENSPCTG00005019690) TFAP2C (ENSPCTG00005019905) ENSPCTG00005019969 RTF2 (ENSPCTG00005019989) GCNT7 (ENSPCTG00005020022) CASS4 (ENSPCTG00005020081) CSTF1 (ENSPCTG00005020190) AURKA (ENSPCTG00005020213) FAM210B (ENSPCTG00005020243) MC3R (ENSPCTG00005020261) CBLN4 (ENSPCTG00005020287) ENSPCTG00005020310 ENSPCTG00005020331 ##22 DOK5 (ENSPCTG00005020398) PFDN4 (ENSPCTG00005020437) CYP24A1 (ENSPCTG00005020488) BCAS1 (ENSPCTG00005020687) ENSPCTG00005020977 ENSPCTG00005020985 ZNF217 (ENSPCTG00005021008) ENSPCTG00005021022 TSHZ2 (ENSPCTG00005021047) ZFP64 (ENSPCTG00005021080) ENSPCTG00005004261 ATP9A (ENSPCTG00005004382) NFATC2 (ENSPCTG00005004813) KCNG1 (ENSPCTG00005004977) MOCS3 (ENSPCTG00005004988) Sperm whale MODERN SPECIES 14 GJA9 (ENSPCTG00005003465) MYCBP (ENSPCTG00005003457) RRAGC (ENSPCTG00005003438) ENSPCTG00005003419 MACF1 (ENSPCTG00005001870) ENSPCTG00005001506 ENSPCTG00005001487 HEYL (ENSPCTG00005001467) NT5C1A (ENSPCTG00005001445) HPCAL4 (ENSPCTG00005001433) PPIE (ENSPCTG00005001275) ENSPCTG00005001205 ENSPCTG00005001192 TRIT1 (ENSPCTG00005001108) MYCL (ENSPCTG00005001056) ENSPCTG00005001041 ##22 PPT1 (ENSPCTG00005001029) RLF (ENSPCTG00005001013) TMCO2 (ENSPCTG00005000997) ZMPSTE24 (ENSPCTG00005000946) COL9A2 (ENSPCTG00005000884) ENSPCTG00005000858 SMAP2 (ENSPCTG00005000816) ZFP69B (ENSPCTG00005000787) ZFP69 (ENSPCTG00005000774) EXO5 (ENSPCTG00005000767) ZNF684 (ENSPCTG00005000746) ENSPCTG00005000725 RIMS3 (ENSPCTG00005000713) ENSPCTG00005000702 NFYC (ENSPCTG00005000651) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Laurasiatheria_c ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Equus ANCESTRAL SPECIES 2 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000158790.e.a ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790.f ENSGT00940000155272 ENSGT00390000015214 ENSGT00390000003897.s.a ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B Horse DUPLICATION Horse MODERN SPECIES 11 NDUFS5 (ENSECAG00000011681) MACF1 (ENSECAG00000013366) OXCT2 (ENSECAG00000010065) ENSECAG00000038706 PABPC4 (ENSECAG00000009396) HEYL (ENSECAG00000007220) NT5C1A (ENSECAG00000019710) HPCAL4 (ENSECAG00000019203) ENSECAG00000031692 ENSECAG00000008528 TRIT1 (ENSECAG00000010597) ENSECAG00000038999 MYCL (ENSECAG00000008765) MFSD2A (ENSECAG00000013728) ENSECAG00000052677 CAP1 (ENSECAG00000024658) ##22 PPT1 (ENSECAG00000017370) RLF (ENSECAG00000012776) TMCO2 (ENSECAG00000037648) ZMPSTE24 (ENSECAG00000007773) COL9A2 (ENSECAG00000010971) SMAP2 (ENSECAG00000024413) ZFP69B (ENSECAG00000023120) ZFP69 (ENSECAG00000022039) EXO5 (ENSECAG00000004928) ENSECAG00000047147 ZNF684 (ENSECAG00000022010) ENSECAG00000048355 RIMS3 (ENSECAG00000021113) NFYC (ENSECAG00000000678) KCNQ4 (ENSECAG00000021257) Horse MODERN SPECIES FRAT1 (ENSECAG00000028005) ARHGAP19 (ENSECAG00000011823) SLIT1 (ENSECAG00000011973) LCOR (ENSECAG00000013509) PIK3AP1 (ENSECAG00000013623) TM9SF3 (ENSECAG00000013751) TLL2 (ENSECAG00000014145) DNTT (ENSECAG00000015340) BLNK (ENSECAG00000015745) ZNF518A (ENSECAG00000016003) CCNJ (ENSECAG00000016020) CC2D2B (ENSECAG00000016113) ENTPD1 (ENSECAG00000016258) TCTN3 (ENSECAG00000016594) ALDH18A1 (ENSECAG00000016847) ENSECAG00000034134 ##22 SORBS1 (ENSECAG00000018511) PDLIM1 (ENSECAG00000020816) CYP2C107 (ENSECAG00000036067) ENSECAG00000048214 CYP2C108 (ENSECAG00000032037) CYP2C92 (ENSECAG00000038251) CYP2C110 (ENSECAG00000036814) CYP2C111 (ENSECAG00000028267) ENSECAG00000056239 ENSECAG00000046727 CYP2C113 (ENSECAG00000039250) CYP2C114 (ENSECAG00000030406) HELLS (ENSECAG00000018810) TBC1D12 (ENSECAG00000021438) NOC3L (ENSECAG00000021720) Donkey MODERN SPECIES 25 NDUFS5 (ENSEASG00005013292) MACF1 (ENSEASG00005013583) ENSEASG00005038346 ENSEASG00005035819 ENSEASG00005014125 ENSEASG00005014119 ENSEASG00005014122 NT5C1A (ENSEASG00005014123) HPCAL4 (ENSEASG00005030469) ENSEASG00005014118 ENSEASG00005031332 TRIT1 (ENSEASG00005000884) ENSEASG00005000897 MYCL (ENSEASG00005000909) MFSD2A (ENSEASG00005000914) CAP1 (ENSEASG00005000919) ##22 ENSEASG00005026058 ENSEASG00005000926 RLF (ENSEASG00005000935) TMCO2 (ENSEASG00005000974) ZMPSTE24 (ENSEASG00005000980) ENSEASG00005000994 SMAP2 (ENSEASG00005001012) ZFP69B (ENSEASG00005001020) ZFP69 (ENSEASG00005035436) ZNF684 (ENSEASG00005027767) EXO5 (ENSEASG00005037469) RIMS3 (ENSEASG00005001037) NFYC (ENSEASG00005001046) KCNQ4 (ENSEASG00005001062) CITED4 (ENSEASG00005001107) Chiroptera ANCESTRAL SPECIES ENSGT00390000017974 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Microchiroptera ANCESTRAL SPECIES 1 ENSGT00390000017974 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 27 RHBDL2 (ENSRFEG00010003362) ENSRFEG00010003392 NDUFS5 (ENSRFEG00010004262) MACF1 (ENSRFEG00010003811) ENSRFEG00010004273 ENSRFEG00010004310 PABPC4 (ENSRFEG00010004353) HEYL (ENSRFEG00010004468) NT5C1A (ENSRFEG00010004485) HPCAL4 (ENSRFEG00010004498) ENSRFEG00010004530 ENSRFEG00010004561 TRIT1 (ENSRFEG00010004607) MYCL (ENSRFEG00010004654) MFSD2A (ENSRFEG00010004694) ENSRFEG00010004740 ##22 PPT1 (ENSRFEG00010004763) RLF (ENSRFEG00010004791) ENSRFEG00010004804 TMCO2 (ENSRFEG00010004812) ZMPSTE24 (ENSRFEG00010004824) COL9A2 (ENSRFEG00010004846) SMAP2 (ENSRFEG00010004874) ZFP69B (ENSRFEG00010004898) ZFP69 (ENSRFEG00010004907) EXO5 (ENSRFEG00010004913) ZNF684 (ENSRFEG00010004917) RIMS3 (ENSRFEG00010005135) NFYC (ENSRFEG00010005156) KCNQ4 (ENSRFEG00010005194) CITED4 (ENSRFEG00010005224) Greater horseshoe bat MODERN SPECIES DCX (ENSRFEG00010021969) SERTM2 (ENSRFEG00010021965) ENSRFEG00010021963 ENSRFEG00010021962 TRPC5OS (ENSRFEG00010021959) TRPC5 (ENSRFEG00010021954) AMOT (ENSRFEG00010021947) ENSRFEG00010021943 IL13RA2 (ENSRFEG00010021937) LRCH2 (ENSRFEG00010021914) PLS3 (ENSRFEG00010021863) ENSRFEG00010021854 ENSRFEG00010021846 CT83 (ENSRFEG00010021837) ENSRFEG00010021834 ENSRFEG00010021822 ##22 KLHL13 (ENSRFEG00010021803) ENSRFEG00010021785 WDR44 (ENSRFEG00010021758) DOCK11 (ENSRFEG00010011336) IL13RA1 (ENSRFEG00010009938) ENSRFEG00010009911 LONRF3 (ENSRFEG00010009814) ENSRFEG00010009757 PGRMC1 (ENSRFEG00010009713) ENSRFEG00010009697 ENSRFEG00010009627 ENSRFEG00010009581 STEEP1 (ENSRFEG00010009475) ENSRFEG00010009340 ENSRFEG00010009302 Microbat MODERN SPECIES 1159 ENSMLUG00000009236 TRIT1 (ENSMLUG00000000334) MYCL (ENSMLUG00000000337) MFSD2A (ENSMLUG00000000339) ENSMLUG00000009660 CAP1 (ENSMLUG00000011626) ##22 PPT1 (ENSMLUG00000011644) RLF (ENSMLUG00000001580) TMCO2 (ENSMLUG00000001582) ZMPSTE24 (ENSMLUG00000026592) COL9A2 (ENSMLUG00000001585) SMAP2 (ENSMLUG00000006849) ENSMLUG00000025295 ENSMLUG00000003779 LRRC41 (ENSMLUG00000003773) RAD54L (ENSMLUG00000003763) POMGNT1 (ENSMLUG00000003749) TSPAN1 (ENSMLUG00000003744) PIK3R3 (ENSMLUG00000001600) MAST2 (ENSMLUG00000001587) IPP (ENSMLUG00000013524) Megabat MODERN SPECIES 517 CAP1 (ENSPVAG00000015925) ##22 PPT1 (ENSPVAG00000015930) RLF (ENSPVAG00000015936) TMCO2 (ENSPVAG00000015940) ZMPSTE24 (ENSPVAG00000015941) COL9A2 (ENSPVAG00000015943) Carnivora ANCESTRAL SPECIES 1 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Felidae DUPLICATION Felidae ANCESTRAL SPECIES 10 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.k ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Panthera ANCESTRAL SPECIES 4 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.k ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Tiger MODERN SPECIES 100 PABPC4 (ENSPTIG00000005829) HEYL (ENSPTIG00000005479) NT5C1A (ENSPTIG00000005350) HPCAL4 (ENSPTIG00000005006) PPIE (ENSPTIG00000003196) TRIT1 (ENSPTIG00000021134) MYCL (ENSPTIG00000021086) MFSD2A (ENSPTIG00000020789) ENSPTIG00000020510 ##22 PPT1 (ENSPTIG00000020102) RLF (ENSPTIG00000019984) TMCO2 (ENSPTIG00000019965) ZMPSTE24 (ENSPTIG00000019825) COL9A2 (ENSPTIG00000019688) SMAP2 (ENSPTIG00000019202) ZFP69B (ENSPTIG00000019160) ZFP69 (ENSPTIG00000019037) EXO5 (ENSPTIG00000006394) ZNF684 (ENSPTIG00000018626) RIMS3 (ENSPTIG00000018430) NFYC (ENSPTIG00000018001) KCNQ4 (ENSPTIG00000017705) CTPS1 (ENSPTIG00000017227) ENSPTIG00000016960 Panthera_a ANCESTRAL SPECIES 11 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.k ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b leopard MODERN SPECIES 122 TRIT1 (ENSPPRG00000009680) MYCL (ENSPPRG00000006062) MFSD2A (ENSPPRG00000005280) CAP1 (ENSPPRG00000001756) ##22 PPT1 (ENSPPRG00000001088) RLF (ENSPPRG00000000135) TMCO2 (ENSPPRG00000022670) ZMPSTE24 (ENSPPRG00000022765) COL9A2 (ENSPPRG00000023328) SMAP2 (ENSPPRG00000024039) ZFP69B (ENSPPRG00000024607) ZFP69 (ENSPPRG00000024684) EXO5 (ENSPPRG00000020696) ZNF684 (ENSPPRG00000024912) RIMS3 (ENSPPRG00000024970) NFYC (ENSPPRG00000024994) KCNQ4 (ENSPPRG00000017625) CITED4 (ENSPPRG00000020442) ENSPPRG00000020429 lion MODERN SPECIES 80 TRIT1 (ENSPLOG00000019799) MYCL (ENSPLOG00000019715) MFSD2A (ENSPLOG00000019565) ENSPLOG00000019462 ##22 PPT1 (ENSPLOG00000019360) RLF (ENSPLOG00000019302) TMCO2 (ENSPLOG00000019262) ZMPSTE24 (ENSPLOG00000019179) COL9A2 (ENSPLOG00000018979) SMAP2 (ENSPLOG00000018892) ZFP69B (ENSPLOG00000018823) ZFP69 (ENSPLOG00000018790) EXO5 (ENSPLOG00000018778) ZNF684 (ENSPLOG00000018742) RIMS3 (ENSPLOG00000018675) NFYC (ENSPLOG00000018570) Cat MODERN SPECIES 239 AKIRIN1 (ENSFCAG00000030569) NDUFS5 (ENSFCAG00000028222) MACF1 (ENSFCAG00000045633) ENSFCAG00000043069 ENSFCAG00000050715 ENSFCAG00000035501 PABPC4 (ENSFCAG00000015254) NT5C1A (ENSFCAG00000006025) HPCAL4 (ENSFCAG00000043266) ENSFCAG00000006027 ENSFCAG00000044436 ENSFCAG00000045792 TRIT1 (ENSFCAG00000006029) MYCL (ENSFCAG00000022640) MFSD2A (ENSFCAG00000009858) CAP1 (ENSFCAG00000012460) ##22 PPT1 (ENSFCAG00000023550) RLF (ENSFCAG00000031737) TMCO2 (ENSFCAG00000013919) ZMPSTE24 (ENSFCAG00000005722) COL9A2 (ENSFCAG00000046792) SMAP2 (ENSFCAG00000005726) ZFP69B (ENSFCAG00000034968) ZFP69 (ENSFCAG00000033023) EXO5 (ENSFCAG00000005729) ZNF684 (ENSFCAG00000028520) RIMS3 (ENSFCAG00000002913) NFYC (ENSFCAG00000002915) KCNQ4 (ENSFCAG00000002917) CITED4 (ENSFCAG00000045290) CTPS1 (ENSFCAG00000002423) Felidae ANCESTRAL SPECIES ENSGT00390000017955.c.l ##22 Panthera ANCESTRAL SPECIES 51 ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 ENSGT00940000161429 ENSGT00730000111075.b ENSGT00940000159242 ENSGT00390000008591 ENSGT00950000182994.A.n.a.c ENSGT00390000001134.b ENSGT00940000159818 ENSGT00940000163848 ENSGT00940000162668 ENSGT00940000158335 ENSGT00530000065541 ENSGT00940000157822 ENSGT00390000017955.c.l ##22 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b Tiger MODERN SPECIES 26 ENSPTIG00000017045 ENSPTIG00000017226 ENSPTIG00000017867 ENSPTIG00000018425 ##22 Panthera_a ANCESTRAL SPECIES 59 ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 ENSGT00940000161429 ENSGT00730000111075.b ENSGT00940000159242 ENSGT00390000008591 ENSGT00950000182994.A.n.a.c ENSGT00390000001134.b ENSGT00940000159818 ENSGT00940000163848 ENSGT00940000162668 ENSGT00980000199103.A ENSGT00940000158335 ENSGT00940000157822 ENSGT00390000017955.c.l ##22 ENSGT00940000159162 ENSGT00480000042679.a ENSGT00940000159092.d ENSGT00940000159149 ENSGT00940000159060 ENSGT00940000158987 ENSGT00940000161632 ENSGT00390000003231.a.f ENSGT00940000161284 ENSGT00530000063723.b ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b ENSGT00940000161565 ENSGT00940000154661.b lion MODERN SPECIES 88 SH3BGRL (ENSPLOG00000017246) ENSPLOG00000017210 POU3F4 (ENSPLOG00000017183) CYLC1 (ENSPLOG00000017131) RPS6KA6 (ENSPLOG00000016820) HDX (ENSPLOG00000016668) ENSPLOG00000016617 ENSPLOG00000016565 DACH2 (ENSPLOG00000016162) KLHL4 (ENSPLOG00000016046) ENSPLOG00000016027 PABPC5 (ENSPLOG00000016010) ENSPLOG00000015979 ENSPLOG00000015940 ENSPLOG00000015911 ENSPLOG00000015763 ##22 DIAPH2 (ENSPLOG00000014542) PCDH19 (ENSPLOG00000021513) ENSPLOG00000021486 TNMD (ENSPLOG00000021456) TSPAN6 (ENSPLOG00000021416) SRPX2 (ENSPLOG00000021382) SYTL4 (ENSPLOG00000021355) CSTF2 (ENSPLOG00000021229) NOX1 (ENSPLOG00000021013) XKRX (ENSPLOG00000020949) ENSPLOG00000020941 GPRASP2 (ENSPLOG00000020928) ENSPLOG00000020887 ARMCX5 (ENSPLOG00000020862) ENSPLOG00000020841 Caniformia ANCESTRAL SPECIES 2 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Caniformia_b ANCESTRAL SPECIES 1 ENSGT00390000017974 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Ursidae DUPLICATION Ursidae ANCESTRAL SPECIES ENSGT00940000165268 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919.z.a ENSGT00940000165766 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.m ##22 ENSGT00940000156790.j ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000017955.c.n ##22 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00910000144179.b.b ENSGT00410000025651.B Ursus ANCESTRAL SPECIES 231 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.m ##22 ENSGT00940000156790.j ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000017955.c.n ##22 ENSGT00940000163099 American black bear MODERN SPECIES 4441 ENSUAMG00000020650 ##22 PPT1 (ENSUAMG00000020878) Polar bear MODERN SPECIES 473 PPIE (ENSUMAG00000017319) ENSUMAG00000017307 TRIT1 (ENSUMAG00000017299) MYCL (ENSUMAG00000017291) MFSD2A (ENSUMAG00000017284) ENSUMAG00000017266 ##22 PPT1 (ENSUMAG00000017252) RLF (ENSUMAG00000017230) TMCO2 (ENSUMAG00000017224) ZMPSTE24 (ENSUMAG00000017218) SMAP2 (ENSUMAG00000017203) ZFP69B (ENSUMAG00000017193) ZFP69 (ENSUMAG00000017175) ENSUMAG00000017169 ##22 ZNF684 (ENSUMAG00000017154) Giant Panda MODERN SPECIES 11 RHBDL2 (ENSAMEG00000010323) AKIRIN1 (ENSAMEG00000028784) ENSAMEG00000010344 MACF1 (ENSAMEG00000010358) ENSAMEG00000027526 ENSAMEG00000026716 PABPC4 (ENSAMEG00000011535) HEYL (ENSAMEG00000011612) NT5C1A (ENSAMEG00000011616) HPCAL4 (ENSAMEG00000025990) PPIE (ENSAMEG00000007346) ENSAMEG00000011490 TRIT1 (ENSAMEG00000004342) MYCL (ENSAMEG00000023600) MFSD2A (ENSAMEG00000004371) ENSAMEG00000004417 ##22 PPT1 (ENSAMEG00000004444) RLF (ENSAMEG00000004478) TMCO2 (ENSAMEG00000004499) ZMPSTE24 (ENSAMEG00000004501) COL9A2 (ENSAMEG00000004524) SMAP2 (ENSAMEG00000004571) ZFP69 (ENSAMEG00000031429) ENSAMEG00000024599 ##22 ZNF684 (ENSAMEG00000028572) ENSAMEG00000026970 RIMS3 (ENSAMEG00000011913) NFYC (ENSAMEG00000011899) KCNQ4 (ENSAMEG00000011888) CTPS1 (ENSAMEG00000011866) SCMH1 (ENSAMEG00000011860) Ursidae ANCESTRAL SPECIES ENSGT00390000014577.b ENSGT00390000014814.a.b.a.b.a.b ENSGT00940000160362 ENSGT00940000154436.a ENSGT00940000154436.b ENSGT00940000157218.C ENSGT00950000183053.A ENSGT00940000161401 ENSGT00940000157999 ENSGT00410000025651.B ENSGT00910000144179.b.b ENSGT00940000159209 ENSGT00940000155689 ENSGT00940000159332 ENSGT00940000163099 ENSGT00390000017955.c.n ##22 ENSGT00940000162278 ENSGT00940000163434 ENSGT00940000158387 ENSGT00940000161290 ENSGT00390000002053 ENSGT00390000001528 ENSGT00950000183034.B ENSGT00940000156790.j ENSGT00390000017955.c.m ##22 ENSGT00390000005318.b.b.b ENSGT00940000158613 ENSGT00390000015214 ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000161166 Ursus ANCESTRAL SPECIES 231 ENSGT00940000163099 ENSGT00390000017955.c.n ##22 ENSGT00940000162278 ENSGT00940000163434 ENSGT00940000158387 ENSGT00390000002053 ENSGT00390000001528 ENSGT00950000183034.B ENSGT00940000156790.j ENSGT00390000017955.c.m ##22 ENSGT00390000005318.b.b.b ENSGT00940000158613 ENSGT00390000015214 ENSGT00940000158790 Polar bear MODERN SPECIES 473 ZNF684 (ENSUMAG00000017154) ENSUMAG00000017169 ##22 ZFP69 (ENSUMAG00000017175) ZFP69B (ENSUMAG00000017193) SMAP2 (ENSUMAG00000017203) ZMPSTE24 (ENSUMAG00000017218) TMCO2 (ENSUMAG00000017224) RLF (ENSUMAG00000017230) PPT1 (ENSUMAG00000017252) ENSUMAG00000017266 ##22 MFSD2A (ENSUMAG00000017284) MYCL (ENSUMAG00000017291) TRIT1 (ENSUMAG00000017299) ENSUMAG00000017307 PPIE (ENSUMAG00000017319) American black bear MODERN SPECIES 7106 ZNF684 (ENSUAMG00000024310) ENSUAMG00000024311 ##22 ZFP69 (ENSUAMG00000024312) Giant Panda MODERN SPECIES 11 ENSAMEG00000025996 FOXJ3 (ENSAMEG00000000591) GUCA2A (ENSAMEG00000000614) GUCA2B (ENSAMEG00000026602) HIVEP3 (ENSAMEG00000029105) EDN2 (ENSAMEG00000000522) FOXO6 (ENSAMEG00000028105) SLFNL1 (ENSAMEG00000011863) SCMH1 (ENSAMEG00000011860) CTPS1 (ENSAMEG00000011866) KCNQ4 (ENSAMEG00000011888) NFYC (ENSAMEG00000011899) RIMS3 (ENSAMEG00000011913) ENSAMEG00000026970 ZNF684 (ENSAMEG00000028572) ENSAMEG00000024599 ##22 ZFP69 (ENSAMEG00000031429) SMAP2 (ENSAMEG00000004571) COL9A2 (ENSAMEG00000004524) ZMPSTE24 (ENSAMEG00000004501) TMCO2 (ENSAMEG00000004499) RLF (ENSAMEG00000004478) PPT1 (ENSAMEG00000004444) ENSAMEG00000004417 ##22 MFSD2A (ENSAMEG00000004371) MYCL (ENSAMEG00000023600) TRIT1 (ENSAMEG00000004342) ENSAMEG00000011490 PPIE (ENSAMEG00000007346) HPCAL4 (ENSAMEG00000025990) NT5C1A (ENSAMEG00000011616) Mustelinae ANCESTRAL SPECIES ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00730000111729 ENSGT00940000154788.pb ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Ferret MODERN SPECIES 167 GJA9 (ENSMPUG00000018591) RHBDL2 (ENSMPUG00000014455) ENSMPUG00000014452 AKIRIN1 (ENSMPUG00000014440) MACF1 (ENSMPUG00000014430) ENSMPUG00000014419 ENSMPUG00000014414 HEYL (ENSMPUG00000014412) NT5C1A (ENSMPUG00000014409) HPCAL4 (ENSMPUG00000014377) PPIE (ENSMPUG00000014345) ENSMPUG00000014337 TRIT1 (ENSMPUG00000014291) MYCL (ENSMPUG00000014286) MFSD2A (ENSMPUG00000014281) CAP1 (ENSMPUG00000014278) ##22 PPT1 (ENSMPUG00000014273) RLF (ENSMPUG00000014267) ZMPSTE24 (ENSMPUG00000014262) COL9A2 (ENSMPUG00000014148) SMAP2 (ENSMPUG00000014143) ZFP69B (ENSMPUG00000014137) ZFP69 (ENSMPUG00000014134) EXO5 (ENSMPUG00000014127) RIMS3 (ENSMPUG00000014121) NFYC (ENSMPUG00000014111) KCNQ4 (ENSMPUG00000014105) ENSMPUG00000014104 CTPS1 (ENSMPUG00000014098) SLFNL1 (ENSMPUG00000014091) SCMH1 (ENSMPUG00000014085) American mink MODERN SPECIES 99 B3KUN4 (ENSNVIG00000013297) AKIRIN1 (ENSNVIG00000013340) ENSNVIG00000013364 MACF1 (ENSNVIG00000013435) ENSNVIG00000014522 ENSNVIG00000014528 PPIE (ENSNVIG00000014547) HPCAL4 (ENSNVIG00000014564) NT5C1A (ENSNVIG00000014581) HEYL (ENSNVIG00000014595) PABPC4 (ENSNVIG00000014643) ENSNVIG00000014799 TRIT1 (ENSNVIG00000014833) MYCL (ENSNVIG00000014970) MFSD2A (ENSNVIG00000014997) CAP1 (ENSNVIG00000015095) ##22 PPT1 (ENSNVIG00000015174) RLF (ENSNVIG00000015255) TMCO2 (ENSNVIG00000015270) ZMPSTE24 (ENSNVIG00000015278) COL9A2 (ENSNVIG00000015312) SMAP2 (ENSNVIG00000015398) ZFP69B (ENSNVIG00000015457) ZFP69 (ENSNVIG00000015479) EXO5 (ENSNVIG00000015513) ZNF684 (ENSNVIG00000015518) RIMS3 (ENSNVIG00000015532) NFYC (ENSNVIG00000015556) KCNQ4 (ENSNVIG00000015699) CITED4 (ENSNVIG00000015724) PYRG1 (ENSNVIG00000015737) Canidae DUPLICATION Canidae DUPLICATION Canidae ANCESTRAL SPECIES 12 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000178388 ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.o.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT01030000236049.a ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000003156.a.b.q.b ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 Canis_lupus ANCESTRAL SPECIES 16 ENSGT00390000017974 ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.o.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT01030000236049.a ENSGT00390000015205 ENSGT00940000163099 ENSGT00390000003156.a.b.q.b ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Dog MODERN SPECIES 6 GJA9 (ENSCAFG00845030152) RHBDL2 (ENSCAFG00845030132) ENSCAFG00845030105 NDUFS5 (ENSCAFG00845030086) MACF1 (ENSCAFG00845017426) ENSCAFG00845011882 PABPC4 (ENSCAFG00845011755) HEYL (ENSCAFG00845011723) NT5C1A (ENSCAFG00845011699) HPCAL4 (ENSCAFG00845011679) PPIE (ENSCAFG00845011567) ENSCAFG00845011459 TRIT1 (ENSCAFG00845011261) MFSD2A (ENSCAFG00845011113) MYCL (ENSCAFG00845011043) CAP1 (ENSCAFG00845010977) ##22 PPT1 (ENSCAFG00845010701) RLF (ENSCAFG00845010433) TMCO2 (ENSCAFG00845010398) ZMPSTE24 (ENSCAFG00845010326) COL9A2 (ENSCAFG00845010158) SMAP2 (ENSCAFG00845009938) ZFP69B (ENSCAFG00845009753) ENSCAFG00845009699 EXO5 (ENSCAFG00845009682) ZNF684 (ENSCAFG00845009658) ENSCAFG00845009641 RIMS3 (ENSCAFG00845009552) NFYC (ENSCAFG00845009374) KCNQ4 (ENSCAFG00845009123) CITED4 (ENSCAFG00845009051) Dingo MODERN SPECIES 344 RHBDL2 (ENSCAFG00020006136) ENSCAFG00020006133 NDUFS5 (ENSCAFG00020006129) ENSCAFG00020005975 ENSCAFG00020004281 ENSCAFG00020004186 PABPC4 (ENSCAFG00020004161) HEYL (ENSCAFG00020004158) NT5C1A (ENSCAFG00020004154) HPCAL4 (ENSCAFG00020004133) PPIE (ENSCAFG00020004132) ENSCAFG00020004108 TRIT1 (ENSCAFG00020003875) MYCL (ENSCAFG00020003867) MFSD2A (ENSCAFG00020003855) ENSCAFG00020003484 ##22 PPT1 (ENSCAFG00020003461) RLF (ENSCAFG00020003446) TMCO2 (ENSCAFG00020003438) ZMPSTE24 (ENSCAFG00020003431) COL9A2 (ENSCAFG00020003418) SMAP2 (ENSCAFG00020003411) ZFP69B (ENSCAFG00020003410) ENSCAFG00020003403 EXO5 (ENSCAFG00020003399) ZNF684 (ENSCAFG00020003394) ENSCAFG00020003387 RIMS3 (ENSCAFG00020003384) NFYC (ENSCAFG00020003362) KCNQ4 (ENSCAFG00020003354) CITED4 (ENSCAFG00020003351) Red fox MODERN SPECIES 183 ENSVVUG00000005268 HPCAL4 (ENSVVUG00000005260) NT5C1A (ENSVVUG00000005242) HEYL (ENSVVUG00000005234) PABPC4 (ENSVVUG00000005215) ENSVVUG00000005210 ENSVVUG00000005208 ENSVVUG00000005204 ENSVVUG00000005200 ENSVVUG00000005199 MYCL (ENSVVUG00000005189) MFSD2A (ENSVVUG00000005183) CAP1 (ENSVVUG00000005182) ##22 PPT1 (ENSVVUG00000005177) RLF (ENSVVUG00000005167) TMCO2 (ENSVVUG00000005166) ZMPSTE24 (ENSVVUG00000005159) ENSVVUG00000005124 SMAP2 (ENSVVUG00000005115) ZFP69B (ENSVVUG00000005101) ZFP69 (ENSVVUG00000005095) ENSVVUG00000005091 EXO5 (ENSVVUG00000005087) ZNF684 (ENSVVUG00000005082) ENSVVUG00000005079 RIMS3 (ENSVVUG00000005066) NFYC (ENSVVUG00000005043) KCNQ4 (ENSVVUG00000005030) Canidae ANCESTRAL SPECIES 21 ENSGT00940000157489 ENSGT00390000015224.c.a.a.a ENSGT00390000006234 ENSGT00390000015355 ENSGT00390000018294 ENSGT00670000098059 ENSGT00940000155155 ENSGT00940000160604 ENSGT00940000160078 ENSGT00940000156077 ENSGT00940000156979 ENSGT00940000157352 ENSGT00390000000002.a.a.a ENSGT00940000157306 ENSGT00940000153713.B.c ENSGT00390000017955.c.o.b ##22 ENSGT00390000003220 ENSGT01030000234527.A.a.b.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00940000160490 ENSGT00390000016221 ENSGT00940000161623 ENSGT00390000014853 ENSGT00390000000483.b ENSGT00940000158750 ENSGT00390000003477.m ENSGT00390000012901 ENSGT00940000159350 ENSGT00940000157037.a ENSGT00940000159192 Canis_lupus ANCESTRAL SPECIES 23 ENSGT00940000157489 ENSGT00390000015224.c.a.a.a ENSGT00390000006234 ENSGT00390000015355 ENSGT00390000018294 ENSGT00670000098059 ENSGT00940000155155 ENSGT00940000160604 ENSGT00940000160078 ENSGT00940000156077 ENSGT00940000156979 ENSGT00940000157352 ENSGT00390000000002.a.a.a ENSGT00940000157306 ENSGT00940000153713.B.c ENSGT00390000017955.c.o.b ##22 ENSGT00390000003220 ENSGT01030000234527.A.a.b.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00940000160490 ENSGT00390000016221 ENSGT00940000161623 ENSGT00390000014853 ENSGT00390000000483.b ENSGT00940000158750 ENSGT00390000003477.m ENSGT00390000012901 ENSGT00940000159350 ENSGT00940000157037.a ENSGT00940000159192 Dog MODERN SPECIES 22 KLB (ENSCAFG00845004657) RPL9 (ENSCAFG00845004647) LIAS (ENSCAFG00845004611) SMIM14 (ENSCAFG00845004549) UBE2K (ENSCAFG00845004479) ENSCAFG00845004455 PDS5A (ENSCAFG00845004259) ENSCAFG00845004204 N4BP2 (ENSCAFG00845004157) RHOH (ENSCAFG00845004084) CHRNA9 (ENSCAFG00845004059) RBM47 (ENSCAFG00845003991) NSUN7 (ENSCAFG00845003943) APBB2 (ENSCAFG00845003917) ENSCAFG00845003870 ENSCAFG00845003847 ##22 ENSCAFG00845003840 JAKMIP1 (ENSCAFG00845003793) C4orf50 (ENSCAFG00845003740) CRMP1 (ENSCAFG00845003689) EVC (ENSCAFG00845003606) EVC2 (ENSCAFG00845003407) STK32B (ENSCAFG00845003289) CYTL1 (ENSCAFG00845003262) MSX1 (ENSCAFG00845003246) STX18 (ENSCAFG00845003190) ENSCAFG00845003138 ZBTB49 (ENSCAFG00845003093) LYAR (ENSCAFG00845003057) TMEM128 (ENSCAFG00845003026) ENSCAFG00845003003 Dingo MODERN SPECIES 138 LIAS (ENSCAFG00020002177) UGDH (ENSCAFG00020002184) SMIM14 (ENSCAFG00020002193) UBE2K (ENSCAFG00020002201) PDS5A (ENSCAFG00020002596) N4BP2 (ENSCAFG00020010537) ENSCAFG00020010539 RHOH (ENSCAFG00020010553) CHRNA9 (ENSCAFG00020010556) RBM47 (ENSCAFG00020010558) ENSCAFG00020010582 ENSCAFG00020010603 APBB2 (ENSCAFG00020010619) UCHL1 (ENSCAFG00020010640) JAKMIP1 (ENSCAFG00020010644) ENSCAFG00020010691 ##22 ENSCAFG00020010696 CRMP1 (ENSCAFG00020010703) EVC (ENSCAFG00020010744) EVC2 (ENSCAFG00020010756) STK32B (ENSCAFG00020010802) CYTL1 (ENSCAFG00020010843) MSX1 (ENSCAFG00020010870) STX18 (ENSCAFG00020010892) NSG1 (ENSCAFG00020010902) ZBTB49 (ENSCAFG00020010909) ENSCAFG00020010924 TMEM128 (ENSCAFG00020010942) OTOP1 (ENSCAFG00020010949) DRD5 (ENSCAFG00020010961) SLC2A9 (ENSCAFG00020011024) Red fox MODERN SPECIES 1 UGDH (ENSVVUG00000014723) SMIM14 (ENSVVUG00000014725) UBE2K (ENSVVUG00000014727) PDS5A (ENSVVUG00000014731) ENSVVUG00000014754 ENSVVUG00000014758 N4BP2 (ENSVVUG00000014762) ENSVVUG00000014768 CHRNA9 (ENSVVUG00000014771) RBM47 (ENSVVUG00000014774) NSUN7 (ENSVVUG00000014781) APBB2 (ENSVVUG00000014809) ENSVVUG00000014827 ENSVVUG00000014831 JAKMIP1 (ENSVVUG00000014847) ENSVVUG00000014858 ##22 ENSVVUG00000014864 CRMP1 (ENSVVUG00000014875) EVC (ENSVVUG00000014888) EVC2 (ENSVVUG00000014895) STK32B (ENSVVUG00000014916) CYTL1 (ENSVVUG00000014924) ENSVVUG00000014927 MSX1 (ENSVVUG00000014929) STX18 (ENSVVUG00000014947) NSG1 (ENSVVUG00000014965) ZBTB49 (ENSVVUG00000014967) ENSVVUG00000014976 TMEM128 (ENSVVUG00000014987) OTOP1 (ENSVVUG00000014999) DRD5 (ENSVVUG00000015003) Canidae ANCESTRAL SPECIES ENSGT00390000017955.c.p ##22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000017955.c.p ##22 Dingo MODERN SPECIES 172 ENSCAFG00020017253 ANKRD13C (ENSCAFG00020017183) CTH (ENSCAFG00020017171) PTGER3 (ENSCAFG00020017158) ZRANB2 (ENSCAFG00020017151) NEGR1 (ENSCAFG00020017144) ENSCAFG00020017119 FPGT (ENSCAFG00020017117) TNNI3K (ENSCAFG00020017106) CRYZ (ENSCAFG00020017097) TYW3 (ENSCAFG00020017095) ENSCAFG00020017094 LHX8 (ENSCAFG00020017087) SLC44A5 (ENSCAFG00020017085) ACADM (ENSCAFG00020017070) ENSCAFG00020017067 ##22 ENSCAFG00020017061 MSH4 (ENSCAFG00020017000) ASB17 (ENSCAFG00020016989) ENSCAFG00020016987 ENSCAFG00020016983 ENSCAFG00020016981 ST6GALNAC3 (ENSCAFG00020016967) ENSCAFG00020016961 PIGK (ENSCAFG00020016959) AK5 (ENSCAFG00020016941) ZZZ3 (ENSCAFG00020016935) USP33 (ENSCAFG00020015481) ENSCAFG00020015435 ENSCAFG00020015403 NEXN (ENSCAFG00020015289) Eulipotyphla ANCESTRAL SPECIES 2111 ENSGT00390000017955.c ##22 ENSGT00940000156790 Hedgehog MODERN SPECIES 2822 CAP1 (ENSEEUG00000005829) ##22 Common shrew MODERN SPECIES 2097 ENSSARG00000010735 ##22 PPT1 (ENSSARG00000010773) Euarchontoglires ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Primates ANCESTRAL SPECIES 4 ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Haplorrhini ANCESTRAL SPECIES 1 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00730000111729 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Simiiformes ANCESTRAL SPECIES 3 ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Platyrrhini DUPLICATION Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919.q ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.xb ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.yb ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.q.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387.a ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099.g ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b.a Cebidae ANCESTRAL SPECIES 1 ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919.q ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.yb ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.xb ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.q.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387.a ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099.g ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b.a Cebidae_a ANCESTRAL SPECIES ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919.q.c ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272.yb ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272.xb ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.q.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387.a ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099.g ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00910000144179.b.b.a ENSGT00410000025651.B Bolivian squirrel monkey MODERN SPECIES 130 MYCBP (ENSSBOG00000030077) RHBDL2 (ENSSBOG00000026311) AKIRIN1 (ENSSBOG00000032907) ENSSBOG00000031752 ENSSBOG00000026836 MACF1 (ENSSBOG00000035552) ENSSBOG00000023286 PABPC4 (ENSSBOG00000026193) HEYL (ENSSBOG00000035072) NT5C1A (ENSSBOG00000034033) HPCAL4 (ENSSBOG00000028543) PPIE (ENSSBOG00000035061) TRIT1 (ENSSBOG00000024417) MYCL (ENSSBOG00000031434) MFSD2A (ENSSBOG00000034208) ENSSBOG00000023387 ##22 PPT1 (ENSSBOG00000031697) RLF (ENSSBOG00000004728) TMCO2 (ENSSBOG00000036191) ZMPSTE24 (ENSSBOG00000026426) ENSSBOG00000034698 SMAP2 (ENSSBOG00000002291) ZFP69B (ENSSBOG00000029619) ZFP69 (ENSSBOG00000021129) EXO5 (ENSSBOG00000009084) ENSSBOG00000036155 RIMS3 (ENSSBOG00000013055) NFYC (ENSSBOG00000023269) KCNQ4 (ENSSBOG00000028751) CTPS1 (ENSSBOG00000020990) SLFNL1 (ENSSBOG00000034600) Capuchin MODERN SPECIES 385 AKIRIN1 (ENSCCAG00000035175) ENSCCAG00000023836 ENSCCAG00000035166 MACF1 (ENSCCAG00000032251) ENSCCAG00000032988 ENSCCAG00000015253 PABPC4 (ENSCCAG00000037306) HEYL (ENSCCAG00000024717) NT5C1A (ENSCCAG00000020441) HPCAL4 (ENSCCAG00000019940) PPIE (ENSCCAG00000024434) ENSCCAG00000035167 TRIT1 (ENSCCAG00000031271) MYCL (ENSCCAG00000022829) MFSD2A (ENSCCAG00000030199) ENSCCAG00000027519 ##22 PPT1 (ENSCCAG00000036658) ENSCCAG00000022725 RLF (ENSCCAG00000029606) TMCO2 (ENSCCAG00000028511) ZMPSTE24 (ENSCCAG00000024055) COL9A2 (ENSCCAG00000035153) SMAP2 (ENSCCAG00000037997) ZFP69B (ENSCCAG00000033657) ENSCCAG00000036754 ENSCCAG00000027686 PKP2 (ENSCCAG00000019077) YARS2 (ENSCCAG00000038073) ENSCCAG00000034355 ENSCCAG00000021132 DNM1L (ENSCCAG00000031176) Marmoset MODERN SPECIES 19 RHBDL2 (ENSCJAG00000002293) ENSCJAG00000082857 ENSCJAG00000043919 ENSCJAG00000045917 MACF1 (ENSCJAG00000002323) ENSCJAG00000083308 ENSCJAG00000002504 ENSCJAG00000002512 HEYL (ENSCJAG00000065395) NT5C1A (ENSCJAG00000002566) HPCAL4 (ENSCJAG00000041542) PPIE (ENSCJAG00000002589) TRIT1 (ENSCJAG00000002620) MYCL (ENSCJAG00000002700) MFSD2A (ENSCJAG00000002712) CAP1 (ENSCJAG00000002738) ##22 PPT1 (ENSCJAG00000002798) RLF (ENSCJAG00000042605) TMCO2 (ENSCJAG00000002830) ZMPSTE24 (ENSCJAG00000002833) ENSCJAG00000075493 COL9A2 (ENSCJAG00000002851) SMAP2 (ENSCJAG00000002908) ZFP69B (ENSCJAG00000002952) ZFP69 (ENSCJAG00000062374) EXO5 (ENSCJAG00000002961) ZNF684 (ENSCJAG00000002965) RIMS3 (ENSCJAG00000002973) NFYC (ENSCJAG00000002987) KCNQ4 (ENSCJAG00000002997) CITED4 (ENSCJAG00000046475) Mas night monkey MODERN SPECIES 604 ENSANAG00000000718 ENSANAG00000006239 MACF1 (ENSANAG00000033273) ENSANAG00000034250 ENSANAG00000034394 PABPC4 (ENSANAG00000025079) HEYL (ENSANAG00000019401) ENSANAG00000035822 NT5C1A (ENSANAG00000037589) HPCAL4 (ENSANAG00000025899) PPIE (ENSANAG00000033595) ENSANAG00000026668 TRIT1 (ENSANAG00000030732) MYCL (ENSANAG00000035601) MFSD2A (ENSANAG00000034076) ENSANAG00000036880 ##22 PPT1 (ENSANAG00000026377) RLF (ENSANAG00000031894) TMCO2 (ENSANAG00000033235) ZMPSTE24 (ENSANAG00000027026) COL9A2 (ENSANAG00000036329) SMAP2 (ENSANAG00000035291) ZFP69B (ENSANAG00000033029) ZFP69 (ENSANAG00000027896) ENSANAG00000020223 RIMS3 (ENSANAG00000029140) NFYC (ENSANAG00000020951) KCNQ4 (ENSANAG00000021072) CITED4 (ENSANAG00000036146) ENSANAG00000037167 SMC2 (ENSANAG00000030051) Platyrrhini ANCESTRAL SPECIES ENSGT00390000017955.c.q.b ##22 Cebidae ANCESTRAL SPECIES ENSGT00390000017955.c.q.b ##22 Cebidae_a ANCESTRAL SPECIES 91 ENSGT00940000160552.e.a ENSGT00730000111371 ENSGT00940000160325.b ENSGT00390000014909 ENSGT00950000183185.c.a.a ENSGT00910000146589 ENSGT00940000159305.g ENSGT00390000009488 ENSGT00390000017613.r ENSGT00530000064712 ENSGT00940000157038 ENSGT00510000047171 ENSGT00940000163007 ENSGT00940000162805 ENSGT00940000154761 ENSGT00390000017955.c.q.b ##22 ENSGT00940000156351 Bolivian squirrel monkey MODERN SPECIES 196 VAMP5 (ENSSBOG00000023652) VAMP8 (ENSSBOG00000025099) ENSSBOG00000024413 ENSSBOG00000020245 ENSSBOG00000004955 CAPG (ENSSBOG00000026620) ELMOD3 (ENSSBOG00000026015) RETSAT (ENSSBOG00000027110) ENSSBOG00000029932 TCF7L1 (ENSSBOG00000024977) KCMF1 (ENSSBOG00000028450) TMSB10 (ENSSBOG00000024439) TRABD2A (ENSSBOG00000021372) ENSSBOG00000026272 DNAH6 (ENSSBOG00000027150) ENSSBOG00000024959 ##22 SUCLG1 (ENSSBOG00000025277) Capuchin MODERN SPECIES 538 KCMF1 (ENSCCAG00000023811) TMSB10 (ENSCCAG00000026929) TRABD2A (ENSCCAG00000023684) DNAH6 (ENSCCAG00000020011) ENSCCAG00000023391 ##22 SUCLG1 (ENSCCAG00000021192) Mas night monkey MODERN SPECIES 678 ENSANAG00000027302 ENSANAG00000026212 ENSANAG00000025977 DIPK2B (ENSANAG00000021306) ENSANAG00000002274 KDM6A (ENSANAG00000027908) ENSANAG00000025278 FUNDC1 (ENSANAG00000035033) EFHC2 (ENSANAG00000026366) ENSANAG00000038387 NDP (ENSANAG00000023159) MAOB (ENSANAG00000034907) MAOA (ENSANAG00000031969) ENSANAG00000031554 ENSANAG00000033764 ENSANAG00000025353 ##22 GPR34 (ENSANAG00000019752) CASK (ENSANAG00000021037) NYX (ENSANAG00000032296) DDX3X (ENSANAG00000017441) ENSANAG00000038233 USP9X (ENSANAG00000036319) MED14 (ENSANAG00000024459) CXorf38 (ENSANAG00000030365) ENSANAG00000004121 ATP6AP2 (ENSANAG00000036929) ENSANAG00000035058 BCOR (ENSANAG00000020198) MID1IP1 (ENSANAG00000018677) TSPAN7 (ENSANAG00000026194) OTC (ENSANAG00000038446) Platyrrhini ANCESTRAL SPECIES ENSGT00390000017955.c.r ##22 Mas night monkey MODERN SPECIES 616 SUCLG1 (ENSANAG00000020294) ENSANAG00000020631 ##22 Catarrhini DUPLICATION Catarrhini ANCESTRAL SPECIES 3 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Hominoidea DUPLICATION Hominoidea ANCESTRAL SPECIES 3 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Hominidae ANCESTRAL SPECIES 3 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 3 ENSGT00940000155272.ec.b ENSGT00390000009130.a.b ENSGT00940000155272.dc ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.ec.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000017955.c.s.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Homo/Pan group ANCESTRAL SPECIES 4 ENSGT00940000155272.dc ENSGT00860000135787 ENSGT00940000155272.ec.b ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.ec.a ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000017955.c.s.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Pan ANCESTRAL SPECIES ENSGT00940000155272.ec.b ENSGT00390000009130.a.b ENSGT00940000155272.dc ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.ec.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00940000153095.g.b.a.a.a.b.b.a.a.b.b.a ENSGT00390000017955.c.s.a ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Chimpanzee MODERN SPECIES NDUFS5 (ENSPTRG00000000568) MACF1 (ENSPTRG00000043118) ENSPTRG00000000572 ENSPTRG00000049535 PABPC4 (ENSPTRG00000000573) HEYL (ENSPTRG00000047504) NT5C1A (ENSPTRG00000000575) HPCAL4 (ENSPTRG00000000576) ENSPTRG00000044983 PPIE (ENSPTRG00000000577) BMP8B (ENSPTRG00000000578) TRIT1 (ENSPTRG00000000579) MYCL (ENSPTRG00000000580) MFSD2A (ENSPTRG00000000581) ENSPTRG00000046517 CAP1 (ENSPTRG00000000583) ##22 PPT1 (ENSPTRG00000000584) RLF (ENSPTRG00000000585) TMCO2 (ENSPTRG00000000586) ZMPSTE24 (ENSPTRG00000000587) COL9A2 (ENSPTRG00000044977) SMAP2 (ENSPTRG00000000589) ZFP69B (ENSPTRG00000000590) ZFP69 (ENSPTRG00000000591) EXO5 (ENSPTRG00000000592) ZNF684 (ENSPTRG00000000593) RIMS3 (ENSPTRG00000000594) NFYC (ENSPTRG00000000596) KCNQ4 (ENSPTRG00000000597) CITED4 (ENSPTRG00000000598) CTPS1 (ENSPTRG00000000599) Bonobo MODERN SPECIES MACF1 (ENSPPAG00000032133) ENSPPAG00000037863 ENSPPAG00000030685 ENSPPAG00000039451 ENSPPAG00000017922 PABPC4 (ENSPPAG00000043625) HEYL (ENSPPAG00000029785) NT5C1A (ENSPPAG00000042148) HPCAL4 (ENSPPAG00000030421) ENSPPAG00000018066 PPIE (ENSPPAG00000042403) ENSPPAG00000008285 TRIT1 (ENSPPAG00000023930) MYCL (ENSPPAG00000029651) MFSD2A (ENSPPAG00000037970) CAP1 (ENSPPAG00000033903) ##22 PPT1 (ENSPPAG00000040559) RLF (ENSPPAG00000032318) TMCO2 (ENSPPAG00000028744) ZMPSTE24 (ENSPPAG00000034912) COL9A2 (ENSPPAG00000042613) SMAP2 (ENSPPAG00000033555) ZFP69B (ENSPPAG00000040903) ZFP69 (ENSPPAG00000028849) ZNF684 (ENSPPAG00000030066) RIMS3 (ENSPPAG00000040113) ENSPPAG00000032067 KCNQ4 (ENSPPAG00000041138) CTPS1 (ENSPPAG00000028405) SLFNL1 (ENSPPAG00000030810) SCMH1 (ENSPPAG00000042517) Human MODERN SPECIES RHBDL2 (ENSG00000158315) AKIRIN1 (ENSG00000174574) NDUFS5 (ENSG00000168653) MACF1 (ENSG00000127603) BMP8A (ENSG00000183682) PABPC4 (ENSG00000090621) HEYL (ENSG00000163909) NT5C1A (ENSG00000116981) HPCAL4 (ENSG00000116983) PPIE (ENSG00000084072) BMP8B (ENSG00000116985) OXCT2 (ENSG00000198754) TRIT1 (ENSG00000043514) MYCL (ENSG00000116990) MFSD2A (ENSG00000168389) CAP1 (ENSG00000131236) ##22 PPT1 (ENSG00000131238) RLF (ENSG00000117000) TMCO2 (ENSG00000188800) ZMPSTE24 (ENSG00000084073) COL9A2 (ENSG00000049089) SMAP2 (ENSG00000084070) ZFP69B (ENSG00000187801) ZFP69 (ENSG00000187815) EXO5 (ENSG00000164002) ZNF684 (ENSG00000117010) RIMS3 (ENSG00000117016) NFYC (ENSG00000066136) KCNQ4 (ENSG00000117013) CITED4 (ENSG00000179862) CTPS1 (ENSG00000171793) Gorilla MODERN SPECIES RHBDL2 (ENSGGOG00000009504) AKIRIN1 (ENSGGOG00000006053) MACF1 (ENSGGOG00000022652) ENSGGOG00000039286 ENSGGOG00000039231 PABPC4 (ENSGGOG00000004002) HEYL (ENSGGOG00000008268) NT5C1A (ENSGGOG00000008274) ENSGGOG00000039917 PPIE (ENSGGOG00000015783) BMP8A (ENSGGOG00000015791) TRIT1 (ENSGGOG00000010070) MYCL (ENSGGOG00000001693) MFSD2A (ENSGGOG00000015275) ENSGGOG00000023672 CAP1 (ENSGGOG00000027527) ##22 PPT1 (ENSGGOG00000025819) RLF (ENSGGOG00000015221) TMCO2 (ENSGGOG00000015048) ZMPSTE24 (ENSGGOG00000002591) COL9A2 (ENSGGOG00000002596) SMAP2 (ENSGGOG00000004018) ZFP69B (ENSGGOG00000039613) ZFP69 (ENSGGOG00000006972) EXO5 (ENSGGOG00000024174) ZNF684 (ENSGGOG00000022914) RIMS3 (ENSGGOG00000009986) ENSGGOG00000007360 KCNQ4 (ENSGGOG00000007364) CTPS1 (ENSGGOG00000017188) SLFNL1 (ENSGGOG00000017189) Orangutan MODERN SPECIES RHBDL2 (ENSPPYG00000001512) NDUFS5 (ENSPPYG00000001511) MACF1 (ENSPPYG00000001509) ENSPPYG00000001507 ENSPPYG00000033182 ENSPPYG00000037293 PABPC4 (ENSPPYG00000001506) HEYL (ENSPPYG00000001505) NT5C1A (ENSPPYG00000001504) HPCAL4 (ENSPPYG00000001503) PPIE (ENSPPYG00000001501) ENSPPYG00000001500 TRIT1 (ENSPPYG00000001499) MYCL (ENSPPYG00000032517) ENSPPYG00000001497 CAP1 (ENSPPYG00000001496) ##22 PPT1 (ENSPPYG00000030814) RLF (ENSPPYG00000001494) TMCO2 (ENSPPYG00000001493) ZMPSTE24 (ENSPPYG00000001492) COL9A2 (ENSPPYG00000001491) SMAP2 (ENSPPYG00000001490) ZFP69B (ENSPPYG00000001489) ZFP69 (ENSPPYG00000001488) ENSPPYG00000035572 EXO5 (ENSPPYG00000001487) ZNF684 (ENSPPYG00000001486) RIMS3 (ENSPPYG00000001485) NFYC (ENSPPYG00000001483) KCNQ4 (ENSPPYG00000001482) CITED4 (ENSPPYG00000001481) Gibbon DUPLICATION Gibbon MODERN SPECIES 2 AKIRIN1 (ENSNLEG00000035139) ENSNLEG00000034249 MACF1 (ENSNLEG00000011857) PABPC4 (ENSNLEG00000011928) HEYL (ENSNLEG00000011965) NT5C1A (ENSNLEG00000011971) ENSNLEG00000028855 ENSNLEG00000028202 PPIE (ENSNLEG00000011979) ENSNLEG00000012019 OXCT2 (ENSNLEG00000012037) TRIT1 (ENSNLEG00000012038) MYCL (ENSNLEG00000012063) ENSNLEG00000012066 ENSNLEG00000012076 CAP1 (ENSNLEG00000012077) ##22 PPT1 (ENSNLEG00000012121) RLF (ENSNLEG00000012124) TMCO2 (ENSNLEG00000012130) ZMPSTE24 (ENSNLEG00000012132) COL9A2 (ENSNLEG00000012137) SMAP2 (ENSNLEG00000032450) ZFP69B (ENSNLEG00000034783) ZFP69 (ENSNLEG00000012184) EXO5 (ENSNLEG00000028361) ZNF684 (ENSNLEG00000012187) RIMS3 (ENSNLEG00000012190) ENSNLEG00000012195 ENSNLEG00000012210 CTPS1 (ENSNLEG00000012214) SLFNL1 (ENSNLEG00000012253) Gibbon MODERN SPECIES 23 PLS1 (ENSNLEG00000004830) ATR (ENSNLEG00000004792) XRN1 (ENSNLEG00000004726) GK5 (ENSNLEG00000004695) TFDP2 (ENSNLEG00000031256) ENSNLEG00000035658 ENSNLEG00000027455 ENSNLEG00000018218 GRK7 (ENSNLEG00000004658) RNF7 (ENSNLEG00000033882) RASA2 (ENSNLEG00000004575) ENSNLEG00000036178 ZBTB38 (ENSNLEG00000004569) PXYLP1 (ENSNLEG00000004544) ENSNLEG00000034016 ENSNLEG00000033738 ##22 SPSB4 (ENSNLEG00000004536) SLC25A36 (ENSNLEG00000004520) TRIM42 (ENSNLEG00000004507) ENSNLEG00000034232 CLSTN2 (ENSNLEG00000004476) NMNAT3 (ENSNLEG00000004471) ENSNLEG00000030080 RBP1 (ENSNLEG00000004461) RBP2 (ENSNLEG00000004446) COPB2 (ENSNLEG00000004381) ENSNLEG00000035567 ENSNLEG00000036042 ENSNLEG00000004379 PIK3CB (ENSNLEG00000004334) FAIM (ENSNLEG00000004331) Hominoidea ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ##22 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 ENSGT00940000155947 ENSGT00530000063353.a.b.b ENSGT00950000182832.B ENSGT00940000158913 ENSGT01010000222287.B.b.a.a.a ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00390000012239 ENSGT00940000157088.r ENSGT00940000156365 ENSGT00910000148001 Hominidae ANCESTRAL SPECIES 2 ENSGT00390000017955.c.s.b ##22 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 ENSGT00940000155947 ENSGT00530000063353.a.b.b ENSGT00950000182832.B ENSGT00940000158913 ENSGT01010000222287.B.b.a.a.a ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00390000012239 ENSGT00940000157088.r ENSGT00940000154035.b.qd ENSGT00940000156365 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00730000111641 ENSGT00940000159892 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 ENSGT00940000158065 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 ENSGT00940000164367 ENSGT00390000017955.c.s.b ##22 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 ENSGT00930000151026.e.b ENSGT00940000155947 ENSGT00530000063353.a.b.b ENSGT00390000003428.x ENSGT00950000182832.B ENSGT00940000158913 ENSGT01010000222287.B.b.a.a.a ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00390000012239 ENSGT00940000157088.r Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000159892 ENSGT00940000155865 ENSGT00890000139436.A.a ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 ENSGT00940000158065 ENSGT00490000044176.b.b ENSGT00940000160975.g ENSGT00950000183062.a.a.a ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 ENSGT00530000064266.e ENSGT00940000164367 ENSGT00390000017955.c.s.b ##22 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 ENSGT00930000151026.e.b ENSGT00940000155947 ENSGT00530000063353.a.b.b ENSGT00390000003428.x ENSGT00950000182832.B ENSGT00940000158913 ENSGT01010000222287.B.b.a.a.a ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00390000012239 ENSGT00940000157088.r Pan ANCESTRAL SPECIES 2 ENSGT00910000146944 ENSGT00940000162026 ENSGT00390000013995.b.a ENSGT00390000007605 ENSGT00940000153510.a.f ENSGT00940000158065 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.c.b.b ENSGT00940000160975.g ENSGT00490000044176.b.b ENSGT00440000039029.g.b ENSGT00950000183062.a.a.a ENSGT00940000153272.a.b.o.b.b ENSGT00940000160282 ENSGT00530000064266.e ENSGT00940000164367 ENSGT00390000017955.c.s.b ##22 ENSGT00940000156324 ENSGT00940000154477.i ENSGT00390000017040 ENSGT00930000151026.e.b ENSGT00940000155947 ENSGT00530000063353.a.b.b ENSGT00390000003428.x ENSGT00950000182832.B ENSGT00940000158913 ENSGT01010000222287.B.b.a.a.a ENSGT00390000017898 ENSGT00950000183034.A ENSGT00390000000367 ENSGT00390000012239 ENSGT00940000157088.r Chimpanzee MODERN SPECIES 16 ENSPTRG00000049304 ENSPTRG00000040549 ENSPTRG00000043397 PDZRN3 (ENSPTRG00000015109) ENSPTRG00000045687 CNTN3 (ENSPTRG00000015111) ENSPTRG00000049296 ENSPTRG00000042566 ENSPTRG00000045768 ENSPTRG00000045243 ENSPTRG00000046458 FRG2C (ENSPTRG00000044885) ENSPTRG00000049578 ENSPTRG00000052629 ROBO2 (ENSPTRG00000015117) ENSPTRG00000052852 ##22 ROBO1 (ENSPTRG00000015118) GBE1 (ENSPTRG00000015119) ENSPTRG00000051774 ENSPTRG00000046576 CADM2 (ENSPTRG00000045795) ENSPTRG00000043858 ENSPTRG00000041165 VGLL3 (ENSPTRG00000047510) ENSPTRG00000051705 CHMP2B (ENSPTRG00000015122) POU1F1 (ENSPTRG00000015123) ENSPTRG00000039491 HTR1F (ENSPTRG00000015124) CGGBP1 (ENSPTRG00000052846) ZNF654 (ENSPTRG00000030181) Bonobo MODERN SPECIES 16 RYBP (ENSPPAG00000039197) SHQ1 (ENSPPAG00000027714) ENSPPAG00000029534 GXYLT2 (ENSPPAG00000037639) ENSPPAG00000009897 PPP4R2 (ENSPPAG00000042397) EBLN2 (ENSPPAG00000043421) ENSPPAG00000022036 PDZRN3 (ENSPPAG00000037945) ENSPPAG00000020828 CNTN3 (ENSPPAG00000028261) ENSPPAG00000026052 HIC2 (ENSPPAG00000037732) FRG2C (ENSPPAG00000034046) ENSPPAG00000038879 ENSPPAG00000041147 ##22 ROBO2 (ENSPPAG00000042422) ROBO1 (ENSPPAG00000035480) GBE1 (ENSPPAG00000041824) ENSPPAG00000039117 CADM2 (ENSPPAG00000030715) VGLL3 (ENSPPAG00000043121) ENSPPAG00000027343 CHMP2B (ENSPPAG00000031884) POU1F1 (ENSPPAG00000038153) ENSPPAG00000034068 HTR1F (ENSPPAG00000008187) ZNF654 (ENSPPAG00000022034) C3orf38 (ENSPPAG00000036241) ENSPPAG00000042785 CSNKA2IP (ENSPPAG00000042933) Gorilla MODERN SPECIES 16 ENSGGOG00000039593 PROK2 (ENSGGOG00000024537) RYBP (ENSGGOG00000040802) SHQ1 (ENSGGOG00000034818) GXYLT2 (ENSGGOG00000005057) ENSGGOG00000043304 PPP4R2 (ENSGGOG00000008408) ENSGGOG00000005021 PDZRN3 (ENSGGOG00000008313) ENSGGOG00000024839 CNTN3 (ENSGGOG00000002395) ENSGGOG00000025270 ENSGGOG00000040706 ENSGGOG00000041697 ROBO2 (ENSGGOG00000011779) ENSGGOG00000040855 ##22 ENSGGOG00000027306 ROBO1 (ENSGGOG00000001449) GBE1 (ENSGGOG00000026805) ENSGGOG00000042856 CADM2 (ENSGGOG00000026417) VGLL3 (ENSGGOG00000009492) ENSGGOG00000039835 CHMP2B (ENSGGOG00000024679) POU1F1 (ENSGGOG00000011966) HTR1F (ENSGGOG00000025641) CGGBP1 (ENSGGOG00000044102) ZNF654 (ENSGGOG00000000500) C3orf38 (ENSGGOG00000000075) ENSGGOG00000041021 CSNKA2IP (ENSGGOG00000036585) Gibbon MODERN SPECIES 13 WDR5B (ENSNLEG00000018651) FAM162A (ENSNLEG00000000293) MIX23 (ENSNLEG00000000291) CSTA (ENSNLEG00000000289) CASR (ENSNLEG00000000284) CD86 (ENSNLEG00000000277) ILDR1 (ENSNLEG00000000266) SLC15A2 (ENSNLEG00000000236) EAF2 (ENSNLEG00000000228) IQCB1 (ENSNLEG00000000202) GOLGB1 (ENSNLEG00000000187) HCLS1 (ENSNLEG00000000180) FBXO40 (ENSNLEG00000000176) ARGFX (ENSNLEG00000013255) ENSNLEG00000015545 ENSNLEG00000032065 ##22 ENSNLEG00000011888 ROBO1 (ENSNLEG00000011861) GBE1 (ENSNLEG00000011827) ENSNLEG00000029461 CADM2 (ENSNLEG00000033517) VGLL3 (ENSNLEG00000011790) ENSNLEG00000028318 CHMP2B (ENSNLEG00000027188) POU1F1 (ENSNLEG00000011761) ENSNLEG00000033668 HTR1F (ENSNLEG00000018632) ZNF654 (ENSNLEG00000011749) C3orf38 (ENSNLEG00000011744) ENSNLEG00000034037 EPHA3 (ENSNLEG00000011707) Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00730000111729 ENSGT00940000155272.ac ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C Cercopithecinae ANCESTRAL SPECIES ENSGT00940000155272.`c.b ENSGT00860000135787 ENSGT00940000155272.ac ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C Vervet Monkey MODERN SPECIES 12 GJA9 (ENSCSAG00000000136) RHBDL2 (ENSCSAG00000001125) AKIRIN1 (ENSCSAG00000001126) MACF1 (ENSCSAG00000001128) ENSCSAG00000001129 ENSCSAG00000001130 PPIE (ENSCSAG00000001131) HPCAL4 (ENSCSAG00000001132) NT5C1A (ENSCSAG00000001133) HEYL (ENSCSAG00000001134) PABPC4 (ENSCSAG00000001135) ENSCSAG00000001136 TRIT1 (ENSCSAG00000001137) MYCL (ENSCSAG00000001138) MFSD2A (ENSCSAG00000001139) CAP1 (ENSCSAG00000001140) ##22 PPT1 (ENSCSAG00000001141) ENSCSAG00000001142 RLF (ENSCSAG00000001143) TMCO2 (ENSCSAG00000001144) ZMPSTE24 (ENSCSAG00000001145) COL9A2 (ENSCSAG00000001146) SMAP2 (ENSCSAG00000001147) ZFP69B (ENSCSAG00000001148) ZFP69 (ENSCSAG00000001149) EXO5 (ENSCSAG00000000137) ZNF684 (ENSCSAG00000001150) RIMS3 (ENSCSAG00000001151) NFYC (ENSCSAG00000001152) KCNQ4 (ENSCSAG00000001153) CITED4 (ENSCSAG00000000138) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00940000155272.`c.b ENSGT00860000135787 ENSGT00940000155272.ac ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C Macaca ANCESTRAL SPECIES ENSGT00940000155824.C ENSGT00940000155272.`c.b ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Macaca_a ANCESTRAL SPECIES ENSGT00390000002919.u ENSGT00940000155824.C ENSGT00940000155272.`c.b ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT01100000263493.a.a.a.b.a.a.a.a.a.a.b.a.a ENSGT00940000158613 ENSGT01100000263493.a.a.a.b.b.b.b.a.a.a.a.a.b ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000161627.a.a.a.a.b.a.a.a.b.c.a.b.b.a.a.d ENSGT00940000159332 ENSGT01030000238095.b ENSGT00940000155689.c ENSGT00940000159209 ENSGT00440000034918.q.a.a.a.d.l.a.a Crab-eating macaque MODERN SPECIES ENSMFAG00000002753 PABPC4 (ENSMFAG00000041481) HEYL (ENSMFAG00000045585) NT5C1A (ENSMFAG00000056414) HPCAL4 (ENSMFAG00000033968) PPIE (ENSMFAG00000002082) ENSMFAG00000031586 ENSMFAG00000041908 ENSMFAG00000058462 TRIT1 (ENSMFAG00000001316) ENSMFAG00000052885 MYCL (ENSMFAG00000029625) ENSMFAG00000063746 ENSMFAG00000058771 MFSD2A (ENSMFAG00000003330) CAP1 (ENSMFAG00000036663) ##22 PPT1 (ENSMFAG00000029038) RLF (ENSMFAG00000001299) TMCO2 (ENSMFAG00000038683) ENSMFAG00000053876 ZMPSTE24 (ENSMFAG00000044167) COL9A2 (ENSMFAG00000028569) SMAP2 (ENSMFAG00000044100) ZFP69 (ENSMFAG00000038294) EXO5 (ENSMFAG00000008984) ZNF684 (ENSMFAG00000000321) ENSMFAG00000050468 ENSMFAG00000054328 RIMS3 (ENSMFAG00000036770) ENSMFAG00000058580 NFYC (ENSMFAG00000033858) Rhesus MODERN SPECIES ENSMMUG00000064543 PABPC4 (ENSMMUG00000007497) HEYL (ENSMMUG00000050019) NT5C1A (ENSMMUG00000056128) HPCAL4 (ENSMMUG00000044273) PPIE (ENSMMUG00000018869) ENSMMUG00000058881 ENSMMUG00000063318 TRIT1 (ENSMMUG00000016220) ENSMMUG00000051893 ENSMMUG00000054563 MYCL (ENSMMUG00000016223) ENSMMUG00000060377 ENSMMUG00000053512 MFSD2A (ENSMMUG00000011264) CAP1 (ENSMMUG00000009188) ##22 PPT1 (ENSMMUG00000009189) RLF (ENSMMUG00000032180) TMCO2 (ENSMMUG00000052510) ZMPSTE24 (ENSMMUG00000005992) COL9A2 (ENSMMUG00000018664) SMAP2 (ENSMMUG00000013839) ENSMMUG00000057845 ZFP69B (ENSMMUG00000005836) EXO5 (ENSMMUG00000020398) ZNF684 (ENSMMUG00000009234) ENSMMUG00000050602 ENSMMUG00000056255 ENSMMUG00000059358 RIMS3 (ENSMMUG00000039139) NFYC (ENSMMUG00000014970) Pig-tailed macaque MODERN SPECIES 217 ENSMNEG00000035118 ENSMNEG00000038372 ENSMNEG00000043485 PABPC4 (ENSMNEG00000043054) ENSMNEG00000043139 HEYL (ENSMNEG00000009070) NT5C1A (ENSMNEG00000031973) ENSMNEG00000002154 HPCAL4 (ENSMNEG00000028502) ENSMNEG00000033191 PPIE (ENSMNEG00000031362) ENSMNEG00000034094 TRIT1 (ENSMNEG00000023137) MYCL (ENSMNEG00000032787) MFSD2A (ENSMNEG00000028513) CAP1 (ENSMNEG00000036964) ##22 PPT1 (ENSMNEG00000036176) RLF (ENSMNEG00000043618) TMCO2 (ENSMNEG00000034686) ZMPSTE24 (ENSMNEG00000038045) COL9A2 (ENSMNEG00000043170) SMAP2 (ENSMNEG00000032255) ZFP69B (ENSMNEG00000017249) ZFP69 (ENSMNEG00000036561) EXO5 (ENSMNEG00000008813) ZNF684 (ENSMNEG00000044680) RIMS3 (ENSMNEG00000034822) NFYC (ENSMNEG00000027645) KCNQ4 (ENSMNEG00000018935) CTPS1 (ENSMNEG00000044044) SLFNL1 (ENSMNEG00000034423) Cercopithecinae_b ANCESTRAL SPECIES 1 ENSGT00390000002919.u ENSGT00940000155824.C ENSGT00940000155272.`c.b ENSGT00730000111729 ENSGT00940000155272.ac ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00530000063624.C Olive baboon MODERN SPECIES GJA9 (ENSPANG00000006763) RHBDL2 (ENSPANG00000034798) AKIRIN1 (ENSPANG00000004583) ENSPANG00000019099 MACF1 (ENSPANG00000019093) ENSPANG00000006813 PABPC4 (ENSPANG00000009484) HEYL (ENSPANG00000006227) NT5C1A (ENSPANG00000025518) HPCAL4 (ENSPANG00000006453) PPIE (ENSPANG00000000575) ENSPANG00000010056 TRIT1 (ENSPANG00000018125) MYCL (ENSPANG00000042839) MFSD2A (ENSPANG00000011715) CAP1 (ENSPANG00000006452) ##22 PPT1 (ENSPANG00000017273) RLF (ENSPANG00000018124) TMCO2 (ENSPANG00000006394) ZMPSTE24 (ENSPANG00000007506) COL9A2 (ENSPANG00000007011) ZFP69B (ENSPANG00000018450) ZFP69 (ENSPANG00000048994) EXO5 (ENSPANG00000032341) ZNF684 (ENSPANG00000018123) RIMS3 (ENSPANG00000010023) NFYC (ENSPANG00000026473) KCNQ4 (ENSPANG00000006225) CITED4 (ENSPANG00000008319) CTPS1 (ENSPANG00000006392) SLFNL1 (ENSPANG00000005801) Cercopithecinae_d ANCESTRAL SPECIES 1 ENSGT00390000002919.v.b.b ENSGT00940000155824.C ENSGT00730000111729 ENSGT00940000155272.ac ENSGT00940000154788 ENSGT00940000161351 ENSGT00910000147126 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00440000034918.q.a.a.a.d.l.a.a Drill MODERN SPECIES 672 AKIRIN1 (ENSMLEG00000044218) ENSMLEG00000043083 ENSMLEG00000040128 MACF1 (ENSMLEG00000044445) ENSMLEG00000006499 PABPC4 (ENSMLEG00000040716) HEYL (ENSMLEG00000032705) ENSMLEG00000032704 NT5C1A (ENSMLEG00000038970) ENSMLEG00000040607 PPIE (ENSMLEG00000040735) ENSMLEG00000044426 TRIT1 (ENSMLEG00000035296) MYCL (ENSMLEG00000017162) MFSD2A (ENSMLEG00000040826) CAP1 (ENSMLEG00000044449) ##22 ENSMLEG00000043746 RLF (ENSMLEG00000040465) TMCO2 (ENSMLEG00000034301) ZMPSTE24 (ENSMLEG00000037696) COL9A2 (ENSMLEG00000035440) SMAP2 (ENSMLEG00000032355) ZFP69B (ENSMLEG00000014259) ZFP69 (ENSMLEG00000042959) EXO5 (ENSMLEG00000001570) ZNF684 (ENSMLEG00000035552) ENSMLEG00000041734 RIMS3 (ENSMLEG00000042796) NFYC (ENSMLEG00000038570) KCNQ4 (ENSMLEG00000032111) CTPS1 (ENSMLEG00000036132) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 206 BCL10 (ENSCATG00000033396) DDAH1 (ENSCATG00000029993) ENSCATG00000017253 CCN1 (ENSCATG00000033425) ENSCATG00000018597 ZNHIT6 (ENSCATG00000042430) COL24A1 (ENSCATG00000039662) ODF2L (ENSCATG00000038042) CLCA2 (ENSCATG00000039534) CLCA1 (ENSCATG00000031780) CLCA4 (ENSCATG00000037640) ENSCATG00000021850 ENSCATG00000042894 ENSCATG00000030962 SH3GLB1 (ENSCATG00000040359) ENSCATG00000003617 ##22 SELENOF (ENSCATG00000029270) HS2ST1 (ENSCATG00000041674) ENSCATG00000026945 LMO4 (ENSCATG00000041185) PKN2 (ENSCATG00000033010) GTF2B (ENSCATG00000044774) KYAT3 (ENSCATG00000038052) GBP3 (ENSCATG00000038072) GBP1 (ENSCATG00000038852) GBP2 (ENSCATG00000042483) GBP7 (ENSCATG00000035694) ENSCATG00000029435 Sooty mangabey MODERN SPECIES 227 MACF1 (ENSCATG00000039558) ENSCATG00000033745 PABPC4 (ENSCATG00000042164) ENSCATG00000002769 ENSCATG00000005536 HEYL (ENSCATG00000037907) ENSCATG00000036036 NT5C1A (ENSCATG00000038875) HPCAL4 (ENSCATG00000032488) ENSCATG00000032456 PPIE (ENSCATG00000034495) ENSCATG00000037613 TRIT1 (ENSCATG00000034344) MYCL (ENSCATG00000033384) MFSD2A (ENSCATG00000032272) ENSCATG00000035987 ##22 PPT1 (ENSCATG00000035844) RLF (ENSCATG00000032206) TMCO2 (ENSCATG00000044427) ZMPSTE24 (ENSCATG00000043666) COL9A2 (ENSCATG00000032540) SMAP2 (ENSCATG00000039372) ZFP69B (ENSCATG00000032477) ZFP69 (ENSCATG00000030938) EXO5 (ENSCATG00000003100) ZNF684 (ENSCATG00000032130) RIMS3 (ENSCATG00000017445) NFYC (ENSCATG00000032882) KCNQ4 (ENSCATG00000038249) ENSCATG00000030649 CTPS1 (ENSCATG00000033018) Rhinopithecus ANCESTRAL SPECIES 76 ENSGT00860000135787 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00910000147126 ENSGT00940000161166 ENSGT00390000004380.m.a.a.b ENSGT00940000158790 ENSGT00940000155272.ac ENSGT00390000009130.a.b ENSGT00940000155272.`c.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00550000076451.a.a.b ENSGT00390000005318.b.b.b ENSGT00390000017955.c.s ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00550000074801.h.c.b.a.a ENSGT00940000159332 ENSGT00940000155689.c ENSGT00940000159209 ENSGT00440000034918.q.a.a.a.d.l.a.a Golden snub-nosed monkey MODERN SPECIES 2906 ENSRROG00000035560 ENSRROG00000036630 PABPC4 (ENSRROG00000033355) HEYL (ENSRROG00000035732) NT5C1A (ENSRROG00000029433) ENSRROG00000044816 HPCAL4 (ENSRROG00000039612) PPIE (ENSRROG00000044935) ENSRROG00000036368 TRIT1 (ENSRROG00000042670) MYCL (ENSRROG00000039181) ENSRROG00000042951 MFSD2A (ENSRROG00000045774) CAP1 (ENSRROG00000037313) ##22 PPT1 (ENSRROG00000019913) RLF (ENSRROG00000028839) TMCO2 (ENSRROG00000041961) ZMPSTE24 (ENSRROG00000029334) COL9A2 (ENSRROG00000001908) SMAP2 (ENSRROG00000044815) ZFP69B (ENSRROG00000035064) ZFP69 (ENSRROG00000001028) EXO5 (ENSRROG00000003374) ZNF684 (ENSRROG00000032375) RIMS3 (ENSRROG00000044320) NFYC (ENSRROG00000044562) KCNQ4 (ENSRROG00000037203) CTPS1 (ENSRROG00000039545) SLFNL1 (ENSRROG00000041337) Black snub-nosed monkey MODERN SPECIES 443 TRIT1 (ENSRBIG00000043179) MYCL (ENSRBIG00000043373) ENSRBIG00000039892 MFSD2A (ENSRBIG00000027966) CAP1 (ENSRBIG00000028175) ##22 PPT1 (ENSRBIG00000035690) RLF (ENSRBIG00000036531) TMCO2 (ENSRBIG00000037974) ZMPSTE24 (ENSRBIG00000021858) COL9A2 (ENSRBIG00000030760) SMAP2 (ENSRBIG00000031486) ZFP69B (ENSRBIG00000033501) ZFP69 (ENSRBIG00000031369) ZNF684 (ENSRBIG00000040446) ENSRBIG00000038649 RIMS3 (ENSRBIG00000031605) NFYC (ENSRBIG00000042960) KCNQ4 (ENSRBIG00000041469) ENSRBIG00000023115 CTPS1 (ENSRBIG00000036114) Catarrhini ANCESTRAL SPECIES ENSGT00390000017955.c.t ##22 Hominoidea ANCESTRAL SPECIES 11 ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT01060000248581.D.a.b.a.b ENSGT01090000260086.F.a.a.a.a ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00940000160176 ENSGT00390000017909 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00910000146903 ENSGT00940000153147.m.a.a.a.b.b ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l ENSGT00940000165451 ENSGT00940000162173.e.a ENSGT00410000029079 ENSGT00940000154453.b.a.a.a.a ENSGT00940000162764.B ENSGT00940000162173.e.b ENSGT00940000159981 Hominidae ANCESTRAL SPECIES 13 ENSGT00940000161927 ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT01060000248581.D.a.b.a.b ENSGT01090000260086.F.a.a.a.a ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00940000160176 ENSGT00390000017909 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00910000146903 ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l ENSGT00940000165451 ENSGT00940000162764.B ENSGT00940000162173.e.b ENSGT00940000159981 ENSGT00940000161962 ENSGT00950000182984.b.a.a.f ENSGT00940000161191.A Homo/Pan/Gorilla group ANCESTRAL SPECIES 28 ENSGT00390000014726 ENSGT00890000139463.a ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT01060000248581.D.a.b.a.b ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00940000160176 ENSGT00390000017909 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00910000146903 ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l ENSGT00940000165451 ENSGT00940000162173.e.a ENSGT00410000029079 ENSGT00940000162764.B ENSGT00940000162173.e.b ENSGT00940000159981 ENSGT00940000161962 Homo/Pan group ANCESTRAL SPECIES 28 ENSGT00390000014726 ENSGT00890000139463.a ENSGT00940000153997.b.a.a.e ENSGT00940000155716 ENSGT00940000158282 ENSGT00940000156111 ENSGT01060000248581.D.a.b.a.b ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00940000160176 ENSGT00390000017909 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l ENSGT00940000165451 ENSGT00940000162173.e.a ENSGT00390000000411.y.b.b ENSGT00940000162764.B ENSGT00940000162173.e.b ENSGT00940000159981 ENSGT00940000161962 Pan ANCESTRAL SPECIES 38 ENSGT01060000248581.D.a.b.a.b ENSGT00940000165686.B ENSGT00940000165451.b ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00910000147906 ENSGT00390000017909 ENSGT00940000160176 ENSGT00910000146875 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00860000136085 ENSGT00940000153147.m.a.b.j ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l ENSGT00940000165451.a ENSGT00940000162173.e.a ENSGT00940000154453.b.a.a.a.a ENSGT00940000162764.B ENSGT01030000234872 ENSGT00390000000411.y.b.a ENSGT00940000162173.e.b Bonobo MODERN SPECIES 1 MARCHF8 (ENSPPAG00000028418) ALOX5 (ENSPPAG00000040866) ENSPPAG00000030506 ZNF22 (ENSPPAG00000024581) ENSPPAG00000035850 DEPP1 (ENSPPAG00000022877) RASSF4 (ENSPPAG00000029784) ENSPPAG00000011535 TMEM72 (ENSPPAG00000037406) ENSPPAG00000029644 ENSPPAG00000040825 ENSPPAG00000036942 ENSPPAG00000035899 ZNF32 (ENSPPAG00000034462) ZNF485 (ENSPPAG00000021996) ENSPPAG00000039814 ##22 ZNF239 (ENSPPAG00000033281) ZNF487 (ENSPPAG00000032625) FXYD4 (ENSPPAG00000019250) RASGEF1A (ENSPPAG00000000793) CSGALNACT2 (ENSPPAG00000040591) RET (ENSPPAG00000034047) BMS1 (ENSPPAG00000027837) ENSPPAG00000040342 ZNF33B (ENSPPAG00000029847) ENSPPAG00000028508 ZNF37A (ENSPPAG00000035834) ENSPPAG00000036315 ENSPPAG00000035723 ZNF33A (ENSPPAG00000013516) ZNF25 (ENSPPAG00000041890) Chimpanzee MODERN SPECIES 1 ALOX5 (ENSPTRG00000002458) OR13A1 (ENSPTRG00000002457) ENSPTRG00000048339 ENSPTRG00000046008 ZNF22 (ENSPTRG00000052461) ENSPTRG00000048541 DEPP1 (ENSPTRG00000029898) RASSF4 (ENSPTRG00000002452) ENSPTRG00000046785 TMEM72 (ENSPTRG00000002451) CXCL12 (ENSPTRG00000046813) ENSPTRG00000051562 ENSPTRG00000052830 ZNF32 (ENSPTRG00000002448) ZNF485 (ENSPTRG00000024138) ENSPTRG00000046145 ##22 ENSPTRG00000052001 ZNF487 (ENSPTRG00000043193) HNRNPF (ENSPTRG00000002446) FXYD4 (ENSPTRG00000002445) RASGEF1A (ENSPTRG00000002444) CSGALNACT2 (ENSPTRG00000002443) RET (ENSPTRG00000002442) BMS1 (ENSPTRG00000002441) ENSPTRG00000040912 ZNF33B (ENSPTRG00000002430) ENSPTRG00000043977 ENSPTRG00000002438 ENSPTRG00000044282 ENSPTRG00000034546 ENSPTRG00000048509 Gorilla MODERN SPECIES 1 ENSGGOG00000000654 ZFAND4 (ENSGGOG00000003542) MARCHF8 (ENSGGOG00000014991) ALOX5 (ENSGGOG00000012775) OR13A1 (ENSGGOG00000010321) ENSGGOG00000023752 ZNF22 (ENSGGOG00000038098) RASSF4 (ENSGGOG00000012833) DEPP1 (ENSGGOG00000037991) TMEM72 (ENSGGOG00000001297) ENSGGOG00000042421 ENSGGOG00000016332 ENSGGOG00000043484 ZNF32 (ENSGGOG00000005425) ZNF485 (ENSGGOG00000008276) ENSGGOG00000040122 ##22 ZNF239 (ENSGGOG00000001913) ZNF487 (ENSGGOG00000012266) HNRNPF (ENSGGOG00000010867) FXYD4 (ENSGGOG00000010870) RASGEF1A (ENSGGOG00000004902) CSGALNACT2 (ENSGGOG00000007891) RET (ENSGGOG00000003576) ENSGGOG00000040776 ENSGGOG00000028401 ZNF33B (ENSGGOG00000012244) ENSGGOG00000016162 ENSGGOG00000022600 ENSGGOG00000040734 ZNF37A (ENSGGOG00000006145) ZNF33A (ENSGGOG00000014383) Gibbon MODERN SPECIES 8 ALOX5 (ENSNLEG00000015960) ENSNLEG00000026876 ENSNLEG00000036104 ENSNLEG00000019103 ZNF22 (ENSNLEG00000031260) ENSNLEG00000033659 RASSF4 (ENSNLEG00000015929) ENSNLEG00000032751 TMEM72 (ENSNLEG00000032425) ENSNLEG00000030653 ENSNLEG00000033185 ENSNLEG00000033245 ENSNLEG00000015913 ZNF32 (ENSNLEG00000035247) ZNF485 (ENSNLEG00000015899) ENSNLEG00000034314 ##22 ZNF239 (ENSNLEG00000015896) ENSNLEG00000029427 HNRNPF (ENSNLEG00000019098) FXYD4 (ENSNLEG00000035436) RASGEF1A (ENSNLEG00000015884) CSGALNACT2 (ENSNLEG00000015866) RET (ENSNLEG00000015820) BMS1 (ENSNLEG00000015791) ENSNLEG00000015790 ANKRD30BL (ENSNLEG00000015783) ENSNLEG00000015778 ENSNLEG00000015776 ENSNLEG00000033451 ENSNLEG00000032674 ENSNLEG00000016026 Cercopithecidae ANCESTRAL SPECIES ENSGT00390000017955.c.t ##22 Rhinopithecus ANCESTRAL SPECIES 485 ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l.j Black snub-nosed monkey MODERN SPECIES 1438 ZNF32 (ENSRBIG00000031491) ZNF485 (ENSRBIG00000035108) ENSRBIG00000038588 ##22 ZNF487 (ENSRBIG00000000038) FXYD4 (ENSRBIG00000021441) ENSRBIG00000019523 RASGEF1A (ENSRBIG00000042082) CSGALNACT2 (ENSRBIG00000041084) RET (ENSRBIG00000037979) ENSRBIG00000035230 ENSRBIG00000010912 Golden snub-nosed monkey MODERN SPECIES 1919 ZNF32 (ENSRROG00000036182) ZNF485 (ENSRROG00000029289) ENSRROG00000036854 ##22 ZNF487 (ENSRROG00000039432) HNRNPF (ENSRROG00000001235) FXYD4 (ENSRROG00000039691) Cercopithecinae ANCESTRAL SPECIES ENSGT00390000017955.c.t ##22 Cercopithecinae_a ANCESTRAL SPECIES ENSGT00390000017955.c.t ##22 Cercopithecinae_b ANCESTRAL SPECIES 63 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00390000017909 ENSGT00940000160176 ENSGT00910000146875 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00910000146903 ENSGT00940000153147.m.a.a.a.b.b ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000163366 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l.j ENSGT00940000165451 Cercopithecinae_d ANCESTRAL SPECIES 180 ENSGT01100000263491.a.b.a.a.a.a.a.b.c.a ENSGT00940000160176 ENSGT00910000146875 ENSGT00390000006888 ENSGT00390000015224.c.b.b.a.a ENSGT00390000014056 ENSGT00910000146903 ENSGT00940000153147.m.a.a.a.b.b ENSGT00940000153582.b.a.b ENSGT00940000163811 ENSGT00390000017955.c.t ##22 ENSGT00940000162638.B ENSGT00940000157838 ENSGT00940000153062.A.a.a.b ENSGT00940000160822 ENSGT01050000244968.d ENSGT00940000158499 ENSGT00940000153195.B.l.j ENSGT00940000165451 Drill MODERN SPECIES 742 ENSMLEG00000028421 ENSMLEG00000036954 ENSMLEG00000044039 NR2E3 (ENSMLEG00000030308) THSD4 (ENSMLEG00000035642) ENSMLEG00000029118 ZNF22 (ENSMLEG00000027902) RASSF4 (ENSMLEG00000044422) ENSMLEG00000029666 TMEM72 (ENSMLEG00000033773) ENSMLEG00000040897 ENSMLEG00000030159 ENSMLEG00000038715 ZNF32 (ENSMLEG00000039482) ZNF485 (ENSMLEG00000032792) ENSMLEG00000028833 ##22 ZNF487 (ENSMLEG00000043005) HNRNPF (ENSMLEG00000023515) FXYD4 (ENSMLEG00000036422) Tarsier DUPLICATION Tarsier MODERN SPECIES 7093 MFSD2A (ENSTSYG00000012051) CAP1 (ENSTSYG00000007488) ##22 PPT1 (ENSTSYG00000010709) TLK2 (ENSTSYG00000002028) Tarsier MODERN SPECIES 3733 SFMBT1 (ENSTSYG00000012300) STIMATE (ENSTSYG00000032227) MUSTN1 (ENSTSYG00000030888) ITIH4 (ENSTSYG00000028944) ITIH3 (ENSTSYG00000003515) ITIH1 (ENSTSYG00000003497) NEK4 (ENSTSYG00000006316) SPCS1 (ENSTSYG00000033206) GLT8D1 (ENSTSYG00000006853) GNL3 (ENSTSYG00000006851) ENSTSYG00000029785 ##22 PBRM1 (ENSTSYG00000006795) SMIM4 (ENSTSYG00000032069) NT5DC2 (ENSTSYG00000029481) STAB1 (ENSTSYG00000012020) NISCH (ENSTSYG00000032320) TNNC1 (ENSTSYG00000035388) SEMA3G (ENSTSYG00000029536) PHF7 (ENSTSYG00000013760) ENSTSYG00000028289 BAP1 (ENSTSYG00000013738) ENSTSYG00000033645 Strepsirrhini ANCESTRAL SPECIES ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Lemuriformes ANCESTRAL SPECIES ENSGT01090000260070.C ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Mouse lemur MODERN SPECIES 11 NDUFS5 (ENSMICG00000016518) ENSMICG00000042874 MACF1 (ENSMICG00000016523) ENSMICG00000043579 ENSMICG00000044077 PABPC4 (ENSMICG00000016633) ENSMICG00000042198 HEYL (ENSMICG00000030376) NT5C1A (ENSMICG00000016662) HPCAL4 (ENSMICG00000034680) ENSMICG00000016676 ENSMICG00000034577 TRIT1 (ENSMICG00000016294) MYCL (ENSMICG00000030328) MFSD2A (ENSMICG00000016306) CAP1 (ENSMICG00000000248) ##22 ENSMICG00000000250 RLF (ENSMICG00000000307) TMCO2 (ENSMICG00000014156) ZMPSTE24 (ENSMICG00000000308) COL9A2 (ENSMICG00000009969) SMAP2 (ENSMICG00000015504) ZFP69B (ENSMICG00000042001) ZFP69 (ENSMICG00000007201) ZNF684 (ENSMICG00000044852) RIMS3 (ENSMICG00000004270) NFYC (ENSMICG00000004285) KCNQ4 (ENSMICG00000046630) ENSMICG00000029716 CTPS1 (ENSMICG00000014626) SLFNL1 (ENSMICG00000012368) Lemuriformes_a ANCESTRAL SPECIES 72 ENSGT00940000159442 ENSGT00940000158787.nb ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000161166 ENSGT00390000017767.b.b ENSGT00940000161351 ENSGT00940000154788 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 508 TRIT1 (ENSPSMG00000011292) MYCL (ENSPSMG00000011381) MFSD2A (ENSPSMG00000011402) ENSPSMG00000011544 ##22 Greater bamboo lemur MODERN SPECIES 796 ENSPSMG00000014193 PLA2G4A (ENSPSMG00000014179) PTGS2 (ENSPSMG00000014158) ENSPSMG00000014139 ENSPSMG00000014134 ##22 PDC (ENSPSMG00000014124) ODR4 (ENSPSMG00000014108) TPR (ENSPSMG00000013892) ENSPSMG00000013688 ENSPSMG00000013662 HMCN1 (ENSPSMG00000013627) IVNS1ABP (ENSPSMG00000013493) SWT1 (ENSPSMG00000013459) TRMT1L (ENSPSMG00000013437) ENSPSMG00000013381 NIBAN1 (ENSPSMG00000013344) EDEM3 (ENSPSMG00000013310) ENSPSMG00000013233 ENSPSMG00000013211 COLGALT2 (ENSPSMG00000013133) Coquerels sifaka MODERN SPECIES 357 MYCBP (ENSPCOG00000016054) RHBDL2 (ENSPCOG00000018792) AKIRIN1 (ENSPCOG00000028364) NDUFS5 (ENSPCOG00000016682) ENSPCOG00000025754 MACF1 (ENSPCOG00000027318) ENSPCOG00000024778 ENSPCOG00000014516 HPCAL4 (ENSPCOG00000013420) NT5C1A (ENSPCOG00000015476) HEYL (ENSPCOG00000000827) PABPC4 (ENSPCOG00000023725) TRIT1 (ENSPCOG00000014150) MYCL (ENSPCOG00000021177) MFSD2A (ENSPCOG00000013582) CAP1 (ENSPCOG00000009880) ##22 PPT1 (ENSPCOG00000010059) RLF (ENSPCOG00000027247) TMCO2 (ENSPCOG00000009437) ZMPSTE24 (ENSPCOG00000016460) COL9A2 (ENSPCOG00000022937) SMAP2 (ENSPCOG00000026437) ZFP69B (ENSPCOG00000017570) ZFP69 (ENSPCOG00000028710) ZNF684 (ENSPCOG00000026540) RIMS3 (ENSPCOG00000028045) NFYC (ENSPCOG00000021083) KCNQ4 (ENSPCOG00000021204) CTPS1 (ENSPCOG00000028340) SLFNL1 (ENSPCOG00000016977) ENSPCOG00000028276 Bushbaby MODERN SPECIES 259 MYCBP (ENSOGAG00000024435) GJA9 (ENSOGAG00000014545) RHBDL2 (ENSOGAG00000014547) AKIRIN1 (ENSOGAG00000007962) MACF1 (ENSOGAG00000000073) ENSOGAG00000029048 PABPC4 (ENSOGAG00000004067) HEYL (ENSOGAG00000030877) NT5C1A (ENSOGAG00000003617) HPCAL4 (ENSOGAG00000031345) PPIE (ENSOGAG00000003620) ENSOGAG00000025082 TRIT1 (ENSOGAG00000009571) MYCL (ENSOGAG00000015380) MFSD2A (ENSOGAG00000005489) CAP1 (ENSOGAG00000005492) ##22 PPT1 (ENSOGAG00000005495) RLF (ENSOGAG00000002764) TMCO2 (ENSOGAG00000002767) ZMPSTE24 (ENSOGAG00000008841) COL9A2 (ENSOGAG00000010159) SMAP2 (ENSOGAG00000009115) ZFP69B (ENSOGAG00000009114) ZFP69 (ENSOGAG00000009257) ENSOGAG00000014249 RIMS3 (ENSOGAG00000006117) NFYC (ENSOGAG00000012614) KCNQ4 (ENSOGAG00000012616) CITED4 (ENSOGAG00000024517) ENSOGAG00000015398 SLFNL1 (ENSOGAG00000007001) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Tree shrew MODERN SPECIES 1168 TRIT1 (ENSTBEG00000001317) MYCL (ENSTBEG00000002060) MFSD2A (ENSTBEG00000003227) CAP1 (ENSTBEG00000005022) ##22 PPT1 (ENSTBEG00000005886) Glires ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Rodentia ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000164770 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Rodentia_B ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 352 Rhbdl2 (ENSDORG00000010234) Akirin1 (ENSDORG00000025387) Ndufs5 (ENSDORG00000014651) ENSDORG00000024495 ENSDORG00000023553 ENSDORG00000016166 Pabpc4 (ENSDORG00000011581) Heyl (ENSDORG00000024912) Nt5c1a (ENSDORG00000028589) Hpcal4 (ENSDORG00000005161) Ppie (ENSDORG00000005175) ENSDORG00000025089 Trit1 (ENSDORG00000012449) Mycl (ENSDORG00000026501) Mfsd2a (ENSDORG00000012839) ENSDORG00000003053 ##22 Ppt1 (ENSDORG00000027642) Rlf (ENSDORG00000010416) Tmco2 (ENSDORG00000024253) Zmpste24 (ENSDORG00000014026) Col9a2 (ENSDORG00000014027) Smap2 (ENSDORG00000016161) Zfp69 (ENSDORG00000024989) Exo5 (ENSDORG00000003571) Rims3 (ENSDORG00000014652) Nfyc (ENSDORG00000009863) Kcnq4 (ENSDORG00000009865) Cited4 (ENSDORG00000024161) Ctps (ENSDORG00000007319) Slfnl1 (ENSDORG00000004953) Scmh1 (ENSDORG00000004955) Kangaroo rat MODERN SPECIES 409 Gnai1 (ENSDORG00000025007) Gnat3 (ENSDORG00000003981) Cd36 (ENSDORG00000003925) Sema3c (ENSDORG00000007184) Cdhr17 (ENSDORG00000026891) Hgf (ENSDORG00000016073) Cacna2d1 (ENSDORG00000001251) Pclo (ENSDORG00000024949) Sema3e (ENSDORG00000002436) Sema3a (ENSDORG00000015280) Sema3d (ENSDORG00000000723) ENSDORG00000024505 ##22 Grm3 (ENSDORG00000003905) Elapor2 (ENSDORG00000003907) Dmtf1 (ENSDORG00000010983) ENSDORG00000028453 Crot (ENSDORG00000006173) Abcb4 (ENSDORG00000006176) ENSDORG00000006179 ENSDORG00000010840 Rundc3b (ENSDORG00000009192) Slc25a40 (ENSDORG00000009193) Dbf4 (ENSDORG00000009196) Adam22 (ENSDORG00000009198) Sri (ENSDORG00000009204) Steap4 (ENSDORG00000026829) Zfp804b (ENSDORG00000025087) Myomorpha ANCESTRAL SPECIES 3 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Muroidea ANCESTRAL SPECIES 3 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Muroidea_A ANCESTRAL SPECIES 3 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000164770.a ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Cricetidae ANCESTRAL SPECIES 2 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Cricetinae ANCESTRAL SPECIES 5 ENSGT00390000017974.t ENSGT00940000159442.h ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Golden Hamster MODERN SPECIES 783 ENSMAUG00000005081 Rragc (ENSMAUG00000012656) Mycbp (ENSMAUG00000013797) Rhbdl2 (ENSMAUG00000015665) Akirin1 (ENSMAUG00000021503) Ndufs5 (ENSMAUG00000017342) Macf1 (ENSMAUG00000019511) ENSMAUG00000016732 ENSMAUG00000019763 Heyl (ENSMAUG00000021921) Hpcal4 (ENSMAUG00000019694) Ppie (ENSMAUG00000020323) Trit1 (ENSMAUG00000000399) Mycl (ENSMAUG00000019673) Mfsd2a (ENSMAUG00000008783) Cap1 (ENSMAUG00000014946) ##22 Ppt1 (ENSMAUG00000005418) Chinese hamster chok1gshd MODERN SPECIES 111 ENSCGRG00001000948 Rhbdl2 (ENSCGRG00001019222) Akirin1 (ENSCGRG00001019740) Ndufs5 (ENSCGRG00001010913) Macf1 (ENSCGRG00001022689) ENSCGRG00001024169 Pabpc4 (ENSCGRG00001018166) Heyl (ENSCGRG00001014507) Nt5c1a (ENSCGRG00001015879) Hpcal4 (ENSCGRG00001017506) Ppie (ENSCGRG00001018491) Bmp8b (ENSCGRG00001024934) Trit1 (ENSCGRG00001001894) Mycl (ENSCGRG00001012143) Mfsd2a (ENSCGRG00001012559) Cap1 (ENSCGRG00001014999) ##22 Ppt1 (ENSCGRG00001017317) ENSCGRG00001019698 ENSCGRG00001019636 ENSCGRG00001001757 Rlf (ENSCGRG00001007124) Tmco2 (ENSCGRG00001013255) Zmpste24 (ENSCGRG00001013492) Col9a2 (ENSCGRG00001015354) Smap2 (ENSCGRG00001019982) Zfp69 (ENSCGRG00001020565) Exo5 (ENSCGRG00001006191) Rims3 (ENSCGRG00001020274) Nfyc (ENSCGRG00001012554) Kcnq4 (ENSCGRG00001015701) Cited4 (ENSCGRG00001010621) Cricetidae_B ANCESTRAL SPECIES 2 ENSGT00940000159442.h ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00390000009130.a.b ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 1 Akirin1 (ENSMOCG00000003567) Ndufs5 (ENSMOCG00000012730) ENSMOCG00000016501 ENSMOCG00000013336 ENSMOCG00000001459 ENSMOCG00000006289 Pabpc4 (ENSMOCG00000006763) Heyl (ENSMOCG00000000498) Nt5c1a (ENSMOCG00000014202) Hpcal4 (ENSMOCG00000017738) ENSMOCG00000018443 Bmp8b (ENSMOCG00000022145) Trit1 (ENSMOCG00000008173) Mycl (ENSMOCG00000021799) Mfsd2a (ENSMOCG00000020481) ENSMOCG00000005738 ##22 Ppt1 (ENSMOCG00000015437) Rlf (ENSMOCG00000021851) Tmco2 (ENSMOCG00000008800) Zmpste24 (ENSMOCG00000001622) Col9a2 (ENSMOCG00000016172) Smap2 (ENSMOCG00000003493) Zfp69 (ENSMOCG00000001233) Exo5 (ENSMOCG00000009071) Rims3 (ENSMOCG00000002716) ENSMOCG00000010327 Nfyc (ENSMOCG00000018240) Kcnq4 (ENSMOCG00000010712) Cited4 (ENSMOCG00000008568) Ctps (ENSMOCG00000003282) Slfnl1 (ENSMOCG00000019476) Prairie vole MODERN SPECIES 114 ENSMOCG00000005151 ENSMOCG00000009228 Gm11563 (ENSMOCG00000017454) ENSMOCG00000001864 Krtap4-8 (ENSMOCG00000019908) Krtap4-16 (ENSMOCG00000016962) ENSMOCG00000019679 Krtap16-1 (ENSMOCG00000003435) ENSMOCG00000002836 ENSMOCG00000015428 Krt34 (ENSMOCG00000006745) Krt31 (ENSMOCG00000007467) Krt32 (ENSMOCG00000000760) Krt35 (ENSMOCG00000011239) Krt36 (ENSMOCG00000018894) ENSMOCG00000006876 ##22 Krt13 (ENSMOCG00000010928) Krt15 (ENSMOCG00000014586) Krt19 (ENSMOCG00000015107) Krt9 (ENSMOCG00000007293) Krt14 (ENSMOCG00000012751) Krt16 (ENSMOCG00000002310) Krt17 (ENSMOCG00000007079) Krt42 (ENSMOCG00000020707) Eif1 (ENSMOCG00000013986) Gast (ENSMOCG00000015714) Hap1 (ENSMOCG00000018599) Jup (ENSMOCG00000013988) P3h4 (ENSMOCG00000020222) Fkbp10 (ENSMOCG00000020969) Nt5c3b (ENSMOCG00000012904) Northern American deer mouse MODERN SPECIES 11 Akirin1 (ENSPEMG00000030900) Ndufs5 (ENSPEMG00000008080) ENSPEMG00000025195 Macf1 (ENSPEMG00000012737) ENSPEMG00000026409 ENSPEMG00000022339 ENSPEMG00000023569 Heyl (ENSPEMG00000028938) Nt5c1a (ENSPEMG00000021341) Hpcal4 (ENSPEMG00000031286) Ppie (ENSPEMG00000013681) ENSPEMG00000024171 Trit1 (ENSPEMG00000022418) Mycl (ENSPEMG00000029362) Mfsd2a (ENSPEMG00000022479) Cap1 (ENSPEMG00000021949) ##22 Ppt1 (ENSPEMG00000008449) ENSPEMG00000030310 ENSPEMG00000009772 Rlf (ENSPEMG00000027824) Tmco2 (ENSPEMG00000018032) Zmpste24 (ENSPEMG00000017887) Col9a2 (ENSPEMG00000018729) Smap2 (ENSPEMG00000022978) Zfp69 (ENSPEMG00000004280) Exo5 (ENSPEMG00000024028) Rims3 (ENSPEMG00000029843) Nfyc (ENSPEMG00000008178) Kcnq4 (ENSPEMG00000010808) Cited4 (ENSPEMG00000006760) ENSPEMG00000008453 Murinae ANCESTRAL SPECIES 2 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Mus ANCESTRAL SPECIES 3 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00390000000102.a ENSGT00390000000102.b ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00860000135841 Mus_A ANCESTRAL SPECIES 3 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788.s ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00860000135841 ENSGT00910000144179.b.b.g ENSGT00410000025651.B Mus_B ANCESTRAL SPECIES 5 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788.s ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00390000000102.a ENSGT00390000000102.b.b.a ENSGT00390000000102.b.b.b ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Mouse MODERN SPECIES 13 Akirin1 (ENSMUSG00000023075) Ndufs5 (ENSMUSG00000028648) Macf1 (ENSMUSG00000028649) Oxct2a (ENSMUSG00000076436) Bmp8a (ENSMUSG00000032726) Pabpc4 (ENSMUSG00000011257) Heyl (ENSMUSG00000032744) Nt5c1a (ENSMUSG00000054958) Hpcal4 (ENSMUSG00000046093) Ppie (ENSMUSG00000028651) Oxct2b (ENSMUSG00000076438) Bmp8b (ENSMUSG00000002384) Trit1 (ENSMUSG00000028653) Mycl (ENSMUSG00000028654) Mfsd2a (ENSMUSG00000028655) Cap1 (ENSMUSG00000028656) ##22 Ppt1 (ENSMUSG00000028657) 9530002B09Rik (ENSMUSG00000023263) Gm12887 (ENSMUSG00000078575) Gm12886 (ENSMUSG00000078576) Gm12888 (ENSMUSG00000073764) Rlf (ENSMUSG00000049878) Tmco2 (ENSMUSG00000078577) Zmpste24 (ENSMUSG00000043207) Col9a2 (ENSMUSG00000028626) Smap2 (ENSMUSG00000032870) Zfp69 (ENSMUSG00000064141) Exo5 (ENSMUSG00000028629) Rims3 (ENSMUSG00000032890) Nfyc (ENSMUSG00000032897) Kcnq4 (ENSMUSG00000028631) Mus_C ANCESTRAL SPECIES 2 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788.s ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000164770.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00390000000102.a ENSGT00390000000102.b.b.a ENSGT00390000000102.b.a ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C Steppe mouse MODERN SPECIES 3362 Akirin1 (ENSMSIG00000014798) ENSMSIG00000014777 ENSMSIG00000014771 Macf1 (ENSMSIG00000013599) ENSMSIG00000013542 Pabpc4 (ENSMSIG00000013185) Heyl (ENSMSIG00000013161) Nt5c1a (ENSMSIG00000013149) Hpcal4 (ENSMSIG00000013133) Ppie (ENSMSIG00000013106) Bmp8b (ENSMSIG00000013040) Trit1 (ENSMSIG00000013008) Mycl (ENSMSIG00000012978) Mfsd2a (ENSMSIG00000012913) ENSMSIG00000012905 Cap1 (ENSMSIG00000012888) ##22 Ppt1 (ENSMSIG00000012843) ENSMSIG00000012831 spretus MODERN SPECIES 13 Rhbdl2 (MGP_SPRETEiJ_G0027420) Akirin1 (MGP_SPRETEiJ_G0027419) MGP_SPRETEiJ_G0027418 Macf1 (MGP_SPRETEiJ_G0027417) MGP_SPRETEiJ_G0027416 Pabpc4 (MGP_SPRETEiJ_G0027415) Heyl (MGP_SPRETEiJ_G0027414) Nt5c1a (MGP_SPRETEiJ_G0027413) Hpcal4 (MGP_SPRETEiJ_G0027412) Ppie (MGP_SPRETEiJ_G0027411) MGP_SPRETEiJ_G0027410 Bmp8b (MGP_SPRETEiJ_G0027409) Trit1 (MGP_SPRETEiJ_G0027408) MGP_SPRETEiJ_G0027407 Mfsd2a (MGP_SPRETEiJ_G0027406) Cap1 (MGP_SPRETEiJ_G0027405) ##22 Ppt1 (MGP_SPRETEiJ_G0027404) MGP_SPRETEiJ_G0027403 MGP_SPRETEiJ_G0027402 MGP_SPRETEiJ_G0027401 Rlf (MGP_SPRETEiJ_G0027400) Tmco2 (MGP_SPRETEiJ_G0027399) Zmpste24 (MGP_SPRETEiJ_G0027398) Col9a2 (MGP_SPRETEiJ_G0027397) Smap2 (MGP_SPRETEiJ_G0027396) Zfp69 (MGP_SPRETEiJ_G0027395) Exo5 (MGP_SPRETEiJ_G0027394) Rims3 (MGP_SPRETEiJ_G0027393) Nfyc (MGP_SPRETEiJ_G0027392) Kcnq4 (MGP_SPRETEiJ_G0027391) Cited4 (MGP_SPRETEiJ_G0027390) Ryukyu mouse MODERN SPECIES 13 Rhbdl2 (MGP_CAROLIEiJ_G0026440) Akirin1 (MGP_CAROLIEiJ_G0026439) Ndufs5 (MGP_CAROLIEiJ_G0026438) Macf1 (MGP_CAROLIEiJ_G0026437) MGP_CAROLIEiJ_G0026436 Pabpc4 (MGP_CAROLIEiJ_G0026435) Heyl (MGP_CAROLIEiJ_G0026434) Nt5c1a (MGP_CAROLIEiJ_G0026433) Hpcal4 (MGP_CAROLIEiJ_G0026432) Ppie (MGP_CAROLIEiJ_G0026431) MGP_CAROLIEiJ_G0026430 Bmp8b (MGP_CAROLIEiJ_G0026429) Trit1 (MGP_CAROLIEiJ_G0026428) Mycl (MGP_CAROLIEiJ_G0026427) Mfsd2a (MGP_CAROLIEiJ_G0026426) Cap1 (MGP_CAROLIEiJ_G0026425) ##22 Ppt1 (MGP_CAROLIEiJ_G0026424) Rlf (MGP_CAROLIEiJ_G0026423) Tmco2 (MGP_CAROLIEiJ_G0026422) Zmpste24 (MGP_CAROLIEiJ_G0026421) Col9a2 (MGP_CAROLIEiJ_G0026420) Smap2 (MGP_CAROLIEiJ_G0026419) Zfp69 (MGP_CAROLIEiJ_G0026418) Exo5 (MGP_CAROLIEiJ_G0026417) Rims3 (MGP_CAROLIEiJ_G0026416) Nfyc (MGP_CAROLIEiJ_G0026415) Kcnq4 (MGP_CAROLIEiJ_G0026414) Cited4 (MGP_CAROLIEiJ_G0026413) MGP_CAROLIEiJ_G0026412 Ctps (MGP_CAROLIEiJ_G0026411) Slfnl1 (MGP_CAROLIEiJ_G0026410) Shrew mouse MODERN SPECIES 19 Akirin1 (MGP_PahariEiJ_G0028770) Ndufs5 (MGP_PahariEiJ_G0028769) MGP_PahariEiJ_G0028768 Macf1 (MGP_PahariEiJ_G0028767) Bmp8a (MGP_PahariEiJ_G0028766) Pabpc4 (MGP_PahariEiJ_G0028765) Heyl (MGP_PahariEiJ_G0028764) Nt5c1a (MGP_PahariEiJ_G0028763) Hpcal4 (MGP_PahariEiJ_G0028762) Ppie (MGP_PahariEiJ_G0028761) MGP_PahariEiJ_G0028760 MGP_PahariEiJ_G0028759 Trit1 (MGP_PahariEiJ_G0028758) Mycl (MGP_PahariEiJ_G0028757) Mfsd2a (MGP_PahariEiJ_G0028756) Cap1 (MGP_PahariEiJ_G0028755) ##22 Ppt1 (MGP_PahariEiJ_G0028754) MGP_PahariEiJ_G0028753 Rlf (MGP_PahariEiJ_G0028752) Tmco2 (MGP_PahariEiJ_G0028751) Zmpste24 (MGP_PahariEiJ_G0028750) Col9a2 (MGP_PahariEiJ_G0028749) Smap2 (MGP_PahariEiJ_G0028748) MGP_PahariEiJ_G0028747 Exo5 (MGP_PahariEiJ_G0028746) Rims3 (MGP_PahariEiJ_G0028745) Nfyc (MGP_PahariEiJ_G0028744) Kcnq4 (MGP_PahariEiJ_G0028743) Cited4 (MGP_PahariEiJ_G0028742) MGP_PahariEiJ_G0028741 Ctps (MGP_PahariEiJ_G0028740) Rat MODERN SPECIES 15 Rhbdl2 (ENSRNOG00000026592) Akirin1 (ENSRNOG00000026610) Ndufs5 (ENSRNOG00000026646) Macf1 (ENSRNOG00000016047) Bmp8a (ENSRNOG00000030155) Oxct2a (ENSRNOG00000070053) Pabpc4 (ENSRNOG00000015642) Heyl (ENSRNOG00000015318) Nt5c1a (ENSRNOG00000068555) Hpcal4 (ENSRNOG00000050983) Ppie (ENSRNOG00000014762) Bmp8b (ENSRNOG00000033209) Trit1 (ENSRNOG00000014274) Mycl (ENSRNOG00000014259) Mfsd2a (ENSRNOG00000014008) Cap1 (ENSRNOG00000013492) ##22 Ppt1 (ENSRNOG00000012616) Twf1-ps1 (ENSRNOG00000012595) AC124205.2 (ENSRNOG00000059975) Rlf (ENSRNOG00000027921) Tmco2 (ENSRNOG00000012340) Zmpste24 (ENSRNOG00000012054) Col9a2 (ENSRNOG00000011502) LOC680700 (ENSRNOG00000011484) Smap2 (ENSRNOG00000011421) Zfp69 (ENSRNOG00000028662) Exo5 (ENSRNOG00000037432) Rims3 (ENSRNOG00000011171) Nfyc (ENSRNOG00000010735) Kcnq4 (ENSRNOG00000060435) Cited4 (ENSRNOG00000046607) Upper Galilee mountains blind mole rat MODERN SPECIES 879 Mycl (ENSNGAG00000017487) ENSNGAG00000017860 Mfsd2a (ENSNGAG00000003501) ENSNGAG00000015371 ##22 ENSNGAG00000017004 ENSNGAG00000017552 ENSNGAG00000020587 Zmpste24 (ENSNGAG00000000244) Lesser Egyptian jerboa MODERN SPECIES 117 Txlna (ENSJJAG00000007353) Kpna6 (ENSJJAG00000015362) Tmem39b (ENSJJAG00000010538) Khdrbs1 (ENSJJAG00000016809) ENSJJAG00000022891 ENSJJAG00000023812 Adgrb2 (ENSJJAG00000017327) ENSJJAG00000019371 Pef1 (ENSJJAG00000018921) Hcrtr1 (ENSJJAG00000024301) Tinagl1 (ENSJJAG00000019903) ENSJJAG00000023596 ENSJJAG00000000300 Mycl (ENSJJAG00000011159) Mfsd2a (ENSJJAG00000015941) Cap1 (ENSJJAG00000021395) ##22 Ppt1 (ENSJJAG00000016991) ENSJJAG00000021094 Rlf (ENSJJAG00000013083) Tmco2 (ENSJJAG00000006506) Zmpste24 (ENSJJAG00000023367) Col9a2 (ENSJJAG00000000950) Smap2 (ENSJJAG00000024140) ENSJJAG00000022543 Rodentia_A ANCESTRAL SPECIES ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Hystricomorpha ANCESTRAL SPECIES 4 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B Hystricomorpha_a ANCESTRAL SPECIES 1 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000164770 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B ENSGT00940000157999 Hystricomorpha_b ANCESTRAL SPECIES 7 ENSGT00390000017974.u.b ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 171 ENSODEG00000006600 NDUFS5 (ENSODEG00000006145) ENSODEG00000006381 ENSODEG00000006963 ENSODEG00000006675 ENSODEG00000006592 ENSODEG00000019223 HEYL (ENSODEG00000006313) NT5C1A (ENSODEG00000008226) HPCAL4 (ENSODEG00000007714) ENSODEG00000007670 ENSODEG00000007914 TRIT1 (ENSODEG00000006117) MYCL (ENSODEG00000007752) MFSD2A (ENSODEG00000008097) ENSODEG00000006778 ##22 PPT1 (ENSODEG00000006483) ENSODEG00000019420 RLF (ENSODEG00000007661) TMCO2 (ENSODEG00000008442) ENSODEG00000019277 ENSODEG00000007201 Degu MODERN SPECIES 43 KLHL25 (ENSODEG00000020418) ENSODEG00000014809 SV2B (ENSODEG00000014483) SLCO3A1 (ENSODEG00000014776) ST8SIA2 (ENSODEG00000014941) ENSODEG00000014171 ENSODEG00000014949 FAM174B (ENSODEG00000015105) ENSODEG00000014647 CHD2 (ENSODEG00000016028) RGMA (ENSODEG00000014943) MCTP2 (ENSODEG00000016400) NR2F2 (ENSODEG00000014227) ENSODEG00000014492 ARRDC4 (ENSODEG00000014345) ENSODEG00000014516 ##22 ENSODEG00000014398 ENSODEG00000015288 IGF1R (ENSODEG00000014019) SYNM (ENSODEG00000014754) TTC23 (ENSODEG00000014192) LRRC28 (ENSODEG00000015213) ENSODEG00000014090 MEF2A (ENSODEG00000014682) LYSMD4 (ENSODEG00000014842) ADAMTS17 (ENSODEG00000014089) CERS3 (ENSODEG00000014221) ENSODEG00000014357 LINS1 (ENSODEG00000015320) ASB7 (ENSODEG00000014474) ALDH1A3 (ENSODEG00000015012) Degu MODERN SPECIES 161 PARD6G (ENSODEG00000003334) ADNP2 (ENSODEG00000003303) ENSODEG00000003281 ENSODEG00000003240 ##22 TXNL4A (ENSODEG00000003214) ENSODEG00000018937 HSBP1L1 (ENSODEG00000003188) ENSODEG00000003181 KCNG2 (ENSODEG00000003142) CTDP1 (ENSODEG00000003029) ENSODEG00000002960 NFATC1 (ENSODEG00000002866) ATP9B (ENSODEG00000002792) SALL3 (ENSODEG00000002692) GALR1 (ENSODEG00000002674) MBP (ENSODEG00000002651) ZNF236 (ENSODEG00000003041) ZNF516 (ENSODEG00000002971) ENSODEG00000002953 Long-tailed chinchilla MODERN SPECIES 159 ENSCLAG00000009189 ENSCLAG00000010129 RHBDL2 (ENSCLAG00000012649) AKIRIN1 (ENSCLAG00000014736) NDUFS5 (ENSCLAG00000009162) MACF1 (ENSCLAG00000011083) PABPC4 (ENSCLAG00000011899) HEYL (ENSCLAG00000012566) ENSCLAG00000018068 NT5C1A (ENSCLAG00000011943) HPCAL4 (ENSCLAG00000009571) PPIE (ENSCLAG00000010288) TRIT1 (ENSCLAG00000009828) MYCL (ENSCLAG00000010158) MFSD2A (ENSCLAG00000011973) CAP1 (ENSCLAG00000009526) ##22 PPT1 (ENSCLAG00000009987) RLF (ENSCLAG00000009565) TMCO2 (ENSCLAG00000013078) Guinea pig DUPLICATION Guinea pig MODERN SPECIES 143 RHBDL2 (ENSCPOG00000022360) AKIRIN1 (ENSCPOG00000031693) NDUFS5 (ENSCPOG00000033659) MACF1 (ENSCPOG00000010588) ENSCPOG00000021540 PABPC4 (ENSCPOG00000009552) HEYL (ENSCPOG00000038617) NT5C1A (ENSCPOG00000039653) HPCAL4 (ENSCPOG00000038678) PPIE (ENSCPOG00000007365) ENSCPOG00000019366 OXCT2 (ENSCPOG00000024317) TRIT1 (ENSCPOG00000012820) MYCL (ENSCPOG00000036849) MFSD2A (ENSCPOG00000012982) ENSCPOG00000005746 ##22 PPT1 (ENSCPOG00000005754) RLF (ENSCPOG00000013002) TMCO2 (ENSCPOG00000004615) ZMPSTE24 (ENSCPOG00000011521) SMAP2 (ENSCPOG00000011534) ZFP69 (ENSCPOG00000039050) EXO5 (ENSCPOG00000039403) Guinea pig MODERN SPECIES 72 NUP160 (ENSCPOG00000005289) PTPRJ (ENSCPOG00000000801) ENSCPOG00000036627 ENSCPOG00000039752 OR4X2 (ENSCPOG00000006110) ENSCPOG00000015029 ENSCPOG00000026080 ENSCPOG00000006749 ENSCPOG00000035498 ENSCPOG00000010168 ENSCPOG00000022226 OR4C11 (ENSCPOG00000014721) ENSCPOG00000039911 ENSCPOG00000030047 ENSCPOG00000021816 ENSCPOG00000034616 ##22 FCHO1 (ENSCPOG00000010411) B3GNT3 (ENSCPOG00000039336) INSL3 (ENSCPOG00000019362) JAK3 (ENSCPOG00000015116) RPL18A (ENSCPOG00000015205) SLC5A5 (ENSCPOG00000002288) CCDC124 (ENSCPOG00000024560) KCNN1 (ENSCPOG00000021112) ARRDC2 (ENSCPOG00000026098) IL12RB1 (ENSCPOG00000025820) MAST3 (ENSCPOG00000015590) PIK3R2 (ENSCPOG00000024452) Ifi30 (ENSCPOG00000005553) RAB3A (ENSCPOG00000038085) MPV17L2 (ENSCPOG00000039365) Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000007327 MBNL3 (ENSHGLG00000006589) ENSHGLG00000038852 FRMD7 (ENSHGLG00000004804) ENSHGLG00000004576 ENSHGLG00000033534 ENSHGLG00000020040 ENSHGLG00000019909 ENSHGLG00000007311 ENSHGLG00000003373 ENSHGLG00000033634 ENSHGLG00000019864 ENSHGLG00000018874 IGSF1 (ENSHGLG00000002270) ENSHGLG00000019881 ENSHGLG00000002092 ##22 ARHGAP36 (ENSHGLG00000013596) ENOX2 (ENSHGLG00000010881) ENSHGLG00000028508 RBMX2 (ENSHGLG00000048307) GPR119 (ENSHGLG00000020429) ENSHGLG00000018174 ENSHGLG00000034808 ENSHGLG00000050814 ENSHGLG00000019168 ENSHGLG00000043397 ENSHGLG00000037642 RAB33A (ENSHGLG00000018536) AIFM1 (ENSHGLG00000018635) ELF4 (ENSHGLG00000038769) BCORL1 (ENSHGLG00000003484) Naked mole-rat female MODERN SPECIES DYNLT2 (ENSHGLG00000002545) ENSHGLG00000002489 C6orf120 (ENSHGLG00000002449) ENSHGLG00000034651 ENSHGLG00000040894 THBS2 (ENSHGLG00000002362) SMOC2 (ENSHGLG00000044254) ENSHGLG00000002257 ENSHGLG00000036448 ENSHGLG00000049425 ENSHGLG00000002118 ENSHGLG00000020005 BMP5 (ENSHGLG00000048234) ENSHGLG00000001993 ENSHGLG00000040876 ENSHGLG00000001094 ##22 METTL20 (ENSHGLG00000032141) ENSHGLG00000046175 ENSHGLG00000042284 ENSHGLG00000001948 ENSHGLG00000032769 ENSHGLG00000044663 TRAF3IP2 (ENSHGLG00000001553) ENSHGLG00000001175 ENSHGLG00000001107 ENSHGLG00000037783 ENSHGLG00000001833 ENSHGLG00000041737 ENSHGLG00000001927 ENSHGLG00000001976 ENSHGLG00000002026 Naked mole-rat female MODERN SPECIES 26 MYCBP (ENSHGLG00000049839) RHBDL2 (ENSHGLG00000035014) ENSHGLG00000010032 NDUFS5 (ENSHGLG00000040333) MACF1 (ENSHGLG00000012916) ENSHGLG00000013430 PPIE (ENSHGLG00000012598) HPCAL4 (ENSHGLG00000037547) NT5C1A (ENSHGLG00000040411) PABPC4 (ENSHGLG00000011162) ENSHGLG00000033839 ENSHGLG00000010308 MYCL (ENSHGLG00000035021) MFSD2A (ENSHGLG00000010975) ENSHGLG00000049961 ENSHGLG00000011409 ##22 PPT1 (ENSHGLG00000011635) ENSHGLG00000035541 RLF (ENSHGLG00000012491) ENSHGLG00000017963 TMCO2 (ENSHGLG00000012956) ZMPSTE24 (ENSHGLG00000047091) COL9A2 (ENSHGLG00000014385) SMAP2 (ENSHGLG00000044537) EXO5 (ENSHGLG00000016741) ZNF684 (ENSHGLG00000039044) RIMS3 (ENSHGLG00000003243) NFYC (ENSHGLG00000003915) KCNQ4 (ENSHGLG00000004543) CITED4 (ENSHGLG00000013513) ENSHGLG00000019597 Sciuridae ANCESTRAL SPECIES 3 ENSGT00940000159442 ENSGT00940000158787 ENSGT00390000002919 ENSGT00730000111729 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00390000009130.a.b ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES RHBDL2 (ENSSVLG00005003273) AKIRIN1 (ENSSVLG00005003301) NDUFS5 (ENSSVLG00005003321) MACF1 (ENSSVLG00005004041) ENSSVLG00005006096 ENSSVLG00005006142 PABPC4 (ENSSVLG00005006197) HEYL (ENSSVLG00005006277) NT5C1A (ENSSVLG00005006307) HPCAL4 (ENSSVLG00005006346) PPIE (ENSSVLG00005006402) ENSSVLG00005006472 TRIT1 (ENSSVLG00005006559) MYCL (ENSSVLG00005006832) MFSD2A (ENSSVLG00005006874) ENSSVLG00005007032 ##22 PPT1 (ENSSVLG00005007110) RLF (ENSSVLG00005007220) TMCO2 (ENSSVLG00005007276) ZMPSTE24 (ENSSVLG00005008594) COL9A2 (ENSSVLG00005008637) SMAP2 (ENSSVLG00005008838) ZFP69B (ENSSVLG00005009014) ZFP69 (ENSSVLG00005009085) EXO5 (ENSSVLG00005009138) ENSSVLG00005009149 ENSSVLG00005009174 RIMS3 (ENSSVLG00005009202) NFYC (ENSSVLG00005009237) KCNQ4 (ENSSVLG00005009333) CITED4 (ENSSVLG00005009499) Eurasian red squirrel MODERN SPECIES 2 ENSSVLG00005021019 ENSSVLG00005021105 NPAT (ENSSVLG00005021558) ATM (ENSSVLG00005021633) ENSSVLG00005021707 ENSSVLG00005012524 C11orf65 (ENSSVLG00005012582) ENSSVLG00005012690 POGLUT3 (ENSSVLG00005012714) EXPH5 (ENSSVLG00005012839) DDX10 (ENSSVLG00005012943) ENSSVLG00005013030 ENSSVLG00005013129 ENSSVLG00005013189 C11orf87 (ENSSVLG00005013245) ENSSVLG00005013311 ##22 ENSSVLG00005013356 ZC3H12C (ENSSVLG00005013570) RDX (ENSSVLG00005014006) FDX1 (ENSSVLG00005014193) ARHGAP20 (ENSSVLG00005014289) ENSSVLG00005014599 POU2AF2 (ENSSVLG00005014633) POU2AF3 (ENSSVLG00005014733) POU2AF1 (ENSSVLG00005014805) BTG4 (ENSSVLG00005014873) HOATZ (ENSSVLG00005015013) LAYN (ENSSVLG00005015125) SIK2 (ENSSVLG00005015417) PPP2R1B (ENSSVLG00005015511) ALG9 (ENSSVLG00005015676) Marmotini ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919.k.b ENSGT00730000111729 ENSGT00390000002919.l ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00960000186932 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Marmotini_b ANCESTRAL SPECIES ENSGT00940000158787 ENSGT00390000002919.k.a ENSGT00730000111729 ENSGT00390000002919.l ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000015214 ENSGT00960000186932 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B Squirrel MODERN SPECIES 74 AKIRIN1 (ENSSTOG00000023219) ENSSTOG00000030751 NDUFS5 (ENSSTOG00000011059) MACF1 (ENSSTOG00000028672) ENSSTOG00000029371 PABPC4 (ENSSTOG00000010416) HEYL (ENSSTOG00000010427) NT5C1A (ENSSTOG00000010430) HPCAL4 (ENSSTOG00000033957) PPIE (ENSSTOG00000010445) ENSSTOG00000031537 TRIT1 (ENSSTOG00000006446) ENSSTOG00000034207 MYCL (ENSSTOG00000005037) MFSD2A (ENSSTOG00000005042) CAP1 (ENSSTOG00000022338) ##22 PPT1 (ENSSTOG00000005065) ENSSTOG00000033898 ENSSTOG00000022071 TMCO2 (ENSSTOG00000004814) ZMPSTE24 (ENSSTOG00000020016) COL9A2 (ENSSTOG00000005862) SMAP2 (ENSSTOG00000005913) ZFP69B (ENSSTOG00000009229) ZFP69 (ENSSTOG00000031462) EXO5 (ENSSTOG00000007049) RIMS3 (ENSSTOG00000001897) NFYC (ENSSTOG00000001900) KCNQ4 (ENSSTOG00000001907) ENSSTOG00000031714 CTPS1 (ENSSTOG00000014218) Arctic ground squirrel MODERN SPECIES 120 RHBDL2 (ENSUPAG00010016814) ENSUPAG00010016799 NDUFS5 (ENSUPAG00010016787) ENSUPAG00010016776 MACF1 (ENSUPAG00010016632) ENSUPAG00010016600 ENSUPAG00010016593 HEYL (ENSUPAG00010016578) NT5C1A (ENSUPAG00010016564) HPCAL4 (ENSUPAG00010016554) PPIE (ENSUPAG00010016536) TRIT1 (ENSUPAG00010016523) ENSUPAG00010016518 MYCL (ENSUPAG00010016508) MFSD2A (ENSUPAG00010016486) CAP1 (ENSUPAG00010016461) ##22 ENSUPAG00010016456 RLF (ENSUPAG00010016437) TMCO2 (ENSUPAG00010016423) Alpin marmot MODERN SPECIES 15 RHBDL2 (ENSMMMG00000003332) ENSMMMG00000003320 ENSMMMG00000003299 ENSMMMG00000003287 ENSMMMG00000003276 MACF1 (ENSMMMG00000003103) PABPC4 (ENSMMMG00000002940) HEYL (ENSMMMG00000002927) NT5C1A (ENSMMMG00000002912) HPCAL4 (ENSMMMG00000002894) PPIE (ENSMMMG00000002879) TRIT1 (ENSMMMG00000002859) ENSMMMG00000002850 MYCL (ENSMMMG00000002838) MFSD2A (ENSMMMG00000002807) CAP1 (ENSMMMG00000002734) ##22 PPT1 (ENSMMMG00000002699) RLF (ENSMMMG00000002678) TMCO2 (ENSMMMG00000002664) ENSMMMG00000002633 SMAP2 (ENSMMMG00000002536) ZFP69B (ENSMMMG00000002528) ZFP69 (ENSMMMG00000002478) EXO5 (ENSMMMG00000002472) ZNF684 (ENSMMMG00000002456) RIMS3 (ENSMMMG00000002414) NFYC (ENSMMMG00000002381) KCNQ4 (ENSMMMG00000002357) CTPS1 (ENSMMMG00000002324) SLFNL1 (ENSMMMG00000002309) SCMH1 (ENSMMMG00000002265) Lagomorpha ANCESTRAL SPECIES 8 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000154788 ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b ENSGT00410000025651.B Rabbit DUPLICATION Rabbit MODERN SPECIES 4 NDUFS5 (ENSOCUG00000024417) ENSOCUG00000022318 MACF1 (ENSOCUG00000000677) ENSOCUG00000032823 ENSOCUG00000023797 PABPC4 (ENSOCUG00000000562) HEYL (ENSOCUG00000000560) NT5C1A (ENSOCUG00000004298) HPCAL4 (ENSOCUG00000022645) PPIE (ENSOCUG00000007665) ENSOCUG00000031949 ENSOCUG00000007677 TRIT1 (ENSOCUG00000002054) MYCL (ENSOCUG00000025113) MFSD2A (ENSOCUG00000001028) ENSOCUG00000012790 ##22 PPT1 (ENSOCUG00000012796) RLF (ENSOCUG00000017263) TMCO2 (ENSOCUG00000017275) ZMPSTE24 (ENSOCUG00000015825) COL9A2 (ENSOCUG00000015838) SMAP2 (ENSOCUG00000015858) ZFP69 (ENSOCUG00000016000) EXO5 (ENSOCUG00000016005) ENSOCUG00000030737 RIMS3 (ENSOCUG00000014068) NFYC (ENSOCUG00000025540) KCNQ4 (ENSOCUG00000015852) CITED4 (ENSOCUG00000015927) ENSOCUG00000032431 CTPS1 (ENSOCUG00000016294) Rabbit MODERN SPECIES 959 ENSOCUG00000025774 ##22 ENSOCUG00000033353 Pika MODERN SPECIES 1095 CAP1 (ENSOPRG00000007264) ##22 PPT1 (ENSOPRG00000007275) RLF (ENSOPRG00000007289) Atlantogenata ANCESTRAL SPECIES 11 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Afrotheria ANCESTRAL SPECIES 42 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Afrotheria_a ANCESTRAL SPECIES 42 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00940000158790 ENSGT00390000009130.a.b ENSGT00940000155272 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00530000063624.C ENSGT00910000144179.b.b Elephant MODERN SPECIES 332 NDUFS5 (ENSLAFG00000016100) MACF1 (ENSLAFG00000011552) ENSLAFG00000030249 ENSLAFG00000010722 ENSLAFG00000017624 ENSLAFG00000028312 PABPC4 (ENSLAFG00000000151) HEYL (ENSLAFG00000027563) NT5C1A (ENSLAFG00000027551) HPCAL4 (ENSLAFG00000012324) ENSLAFG00000008493 ENSLAFG00000031581 TRIT1 (ENSLAFG00000016876) ENSLAFG00000001935 MFSD2A (ENSLAFG00000003074) CAP1 (ENSLAFG00000005592) ##22 PPT1 (ENSLAFG00000022663) RLF (ENSLAFG00000015722) TMCO2 (ENSLAFG00000015728) ZMPSTE24 (ENSLAFG00000015734) COL9A2 (ENSLAFG00000004588) SMAP2 (ENSLAFG00000008783) ZFP69B (ENSLAFG00000011022) EXO5 (ENSLAFG00000011024) RIMS3 (ENSLAFG00000010340) KCNQ4 (ENSLAFG00000023336) NFYC (ENSLAFG00000001223) CITED4 (ENSLAFG00000031244) ENSLAFG00000025893 ENSLAFG00000013306 ENSLAFG00000013310 Hyrax MODERN SPECIES 2230 CAP1 (ENSPCAG00000002357) ##22 PPT1 (ENSPCAG00000002429) Tenrec MODERN SPECIES 2728 ENSETEG00000012664 ##22 PPT1 (ENSETEG00000012665) Xenarthra ANCESTRAL SPECIES 150 ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183034.B ENSGT00390000001528 ENSGT00390000002053 ENSGT00940000161290 ENSGT00940000158387 ENSGT00940000163434 ENSGT00940000162278 ENSGT00390000015205 ENSGT00940000163099 ENSGT00940000159332 ENSGT00940000155689 ENSGT00940000159209 ENSGT00910000144179.b.b ENSGT00410000025651.B Armadillo DUPLICATION Armadillo MODERN SPECIES 767 ENSDNOG00000041309 ENSDNOG00000040636 ENSDNOG00000002404 ENSDNOG00000018444 HEYL (ENSDNOG00000010392) NT5C1A (ENSDNOG00000014666) ENSDNOG00000034942 ENSDNOG00000044541 TRIT1 (ENSDNOG00000001994) MYCL (ENSDNOG00000001996) MFSD2A (ENSDNOG00000014078) ENSDNOG00000016869 ##22 PPT1 (ENSDNOG00000005527) RLF (ENSDNOG00000035279) TMCO2 (ENSDNOG00000045954) ZMPSTE24 (ENSDNOG00000038575) COL9A2 (ENSDNOG00000043096) SMAP2 (ENSDNOG00000007914) ZFP69B (ENSDNOG00000017460) ZFP69 (ENSDNOG00000007479) EXO5 (ENSDNOG00000042481) ZNF684 (ENSDNOG00000032206) RIMS3 (ENSDNOG00000033940) ENSDNOG00000045744 NFYC (ENSDNOG00000045603) KCNQ4 (ENSDNOG00000035081) CTPS1 (ENSDNOG00000000880) Armadillo MODERN SPECIES 4371 ENSDNOG00000044281 ENSDNOG00000031018 ##22 ENSDNOG00000035462 ENSDNOG00000041065 ENSDNOG00000004828 ENSDNOG00000031815 ENSDNOG00000038404 ENSDNOG00000037819 ENSDNOG00000036460 Sloth MODERN SPECIES 2431 CAP1 (ENSCHOG00000006355) ##22 Platypus MODERN SPECIES 7 AZIN2 (ENSOANG00000004884) ENSOANG00000003185 ENSOANG00000003176 ENSOANG00000003184 MACF1 (ENSOANG00000010005) ENSOANG00000010004 PPIE (ENSOANG00000046878) PABPC4 (ENSOANG00000010001) HEYL (ENSOANG00000046146) NT5C1A (ENSOANG00000037806) ENSOANG00000004880 ENSOANG00000046416 ENSOANG00000002779 MYCL (ENSOANG00000044318) MFSD2A (ENSOANG00000002711) CAP1 (ENSOANG00000012533) ##22 PPT1 (ENSOANG00000044277) ENSOANG00000012704 ENSOANG00000050553 RPL11 (ENSOANG00000000321) ENSOANG00000045912 PITHD1 (ENSOANG00000008890) LYPLA2 (ENSOANG00000046833) GALE (ENSOANG00000039510) HMGCL (ENSOANG00000045129) FUCA1 (ENSOANG00000036041) CNR2 (ENSOANG00000006844) ENSOANG00000046602 PNRC2 (ENSOANG00000044006) SRSF10 (ENSOANG00000004308) ENSOANG00000049301 Sauria ANCESTRAL SPECIES 23 ENSGT00730000111729 ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 Archelosauria ANCESTRAL SPECIES 25 ENSGT00940000155824.C ENSGT00730000111729 ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 ENSGT00940000164147 Archosauria ANCESTRAL SPECIES 22 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 ENSGT00940000164147 Aves ANCESTRAL SPECIES 28 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 ENSGT00940000164147 Neognathae ANCESTRAL SPECIES 26 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000165717 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 ENSGT00940000164147 Galloanserae ANCESTRAL SPECIES 25 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.o ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 Anatidae ANCESTRAL SPECIES 21 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 ENSGT00940000155272 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 Pink-footed goose MODERN SPECIES 73 AK2 (ENSABRG00000020265) AZIN2 (ENSABRG00000020264) NDUFS5 (ENSABRG00000020258) MACF1 (ENSABRG00000013803) ENSABRG00000013065 ENSABRG00000013064 PPIE (ENSABRG00000013061) PABPC4 (ENSABRG00000013035) HEYL (ENSABRG00000013028) NT5C1A (ENSABRG00000013017) HPCAL4 (ENSABRG00000013010) ENSABRG00000012982 TRIT1 (ENSABRG00000012971) MYCL (ENSABRG00000012969) MFSD2A (ENSABRG00000012893) CAP1 (ENSABRG00000012608) ##22 PPT1 (ENSABRG00000012542) SLC17A4 (ENSABRG00000012534) RPL11 (ENSABRG00000012523) ENSABRG00000012514 PITHD1 (ENSABRG00000012506) LYPLA2 (ENSABRG00000012496) GALE (ENSABRG00000012490) HMGCL (ENSABRG00000012489) FUCA1 (ENSABRG00000012475) ENSABRG00000012456 PNRC2 (ENSABRG00000012454) SRSF10 (ENSABRG00000012445) ENSABRG00000012434 MYOM3 (ENSABRG00000012402) IL22RA1 (ENSABRG00000012385) Duck MODERN SPECIES 15 HPCA (ENSAPLG00000006276) TMEM54 (ENSAPLG00000028668) RNF19B (ENSAPLG00000006334) AK2 (ENSAPLG00000006769) AZIN2 (ENSAPLG00000006932) NDUFS5 (ENSAPLG00000011463) ENSAPLG00000024316 ENSAPLG00000017630 ENSAPLG00000021254 ENSAPLG00000018624 ENSAPLG00000026807 ENSAPLG00000009638 PPIE (ENSAPLG00000009716) PABPC4 (ENSAPLG00000009729) HEYL (ENSAPLG00000028745) CAP1 (ENSAPLG00000011906) ##22 NT5C1A (ENSAPLG00000010540) TRIT1 (ENSAPLG00000011421) MYCL (ENSAPLG00000016475) ENSAPLG00000026452 PPT1 (ENSAPLG00000012514) PNRC2 (ENSAPLG00000000996) SRSF10 (ENSAPLG00000005446) ENSAPLG00000005402 MYOM3 (ENSAPLG00000003784) IL22RA1 (ENSAPLG00000003661) ENSAPLG00000003557 GRHL3 (ENSAPLG00000003161) STPG1 (ENSAPLG00000003159) NIPAL3 (ENSAPLG00000002628) RCAN3 (ENSAPLG00000002545) Phasianidae ANCESTRAL SPECIES 24 ENSGT00940000154576 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 ENSGT00510000048978 Japanese quail MODERN SPECIES 15 AZIN2 (ENSCJPG00005001454) NDUFS5 (ENSCJPG00005001463) ENSCJPG00005001547 ENSCJPG00005003929 ENSCJPG00005005009 PPIE (ENSCJPG00005005012) ENSCJPG00005005019 PABPC4 (ENSCJPG00005005022) HEYL (ENSCJPG00005005032) NT5C1A (ENSCJPG00005005035) HPCAL4 (ENSCJPG00005005037) ENSCJPG00005005044 TRIT1 (ENSCJPG00005005054) MYCL (ENSCJPG00005005060) MFSD2A (ENSCJPG00005005062) CAP1 (ENSCJPG00005005065) ##22 PPT1 (ENSCJPG00005005071) RPL11 (ENSCJPG00005005075) ENSCJPG00005005081 PITHD1 (ENSCJPG00005005097) LYPLA2 (ENSCJPG00005005098) GALE (ENSCJPG00005005105) HMGCL (ENSCJPG00005005108) FUCA1 (ENSCJPG00005005110) SRSF10 (ENSCJPG00005005121) ENSCJPG00005005122 MYOM3 (ENSCJPG00005005124) IL22RA1 (ENSCJPG00005005149) ENSCJPG00005005151 GRHL3 (ENSCJPG00005005153) NIPAL3 (ENSCJPG00005005164) Phasianidae_b ANCESTRAL SPECIES 23 ENSGT00940000158451 ENSGT00940000154576 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 ENSGT00510000048978 Chicken MODERN SPECIES 15 RNF19B (ENSGALG00010017699) AK2 (ENSGALG00010017707) AZIN2 (ENSGALG00010017727) NDUFS5 (ENSGALG00010017738) MACF1 (ENSGALG00010017795) ENSGALG00010017821 PPIE (ENSGALG00010017823) PABPC4 (ENSGALG00010017826) HEYL (ENSGALG00010018289) NT5C1A (ENSGALG00010018322) HPCAL4 (ENSGALG00010016461) ENSGALG00010016479 TRIT1 (ENSGALG00010016534) MYCL (ENSGALG00010016453) MFSD2A (ENSGALG00010015097) CAP1 (ENSGALG00010015101) ##22 PPT1 (ENSGALG00010015109) RPL11 (ENSGALG00010015127) TCEB3 (ENSGALG00010015136) PITHD1 (ENSGALG00010015180) LYPLA2 (ENSGALG00010015193) GALE (ENSGALG00010015299) HMGCL (ENSGALG00010015430) FUCA1 (ENSGALG00010015508) CNR2 (ENSGALG00010015524) PNRC2 (ENSGALG00010015555) SRSF10 (ENSGALG00010015617) LBFABP (ENSGALG00010015711) MYOM3 (ENSGALG00010015751) IL22RA1 (ENSGALG00010015798) IFNLR1 (ENSGALG00010015807) Turkey MODERN SPECIES 17 ENSMGAG00000005879 ENSMGAG00000005889 ENSMGAG00000005764 MYOM3 (ENSMGAG00000005790) ENSMGAG00000018128 ENSMGAG00000015726 ENSMGAG00000022163 CNR2 (ENSMGAG00000019272) ENSMGAG00000005732 ENSMGAG00000005686 ENSMGAG00000005676 ENSMGAG00000022230 ENSMGAG00000005606 ENSMGAG00000005572 ENSMGAG00000005521 ENSMGAG00000005626 ##22 ENSMGAG00000005594 ENSMGAG00000005587 ENSMGAG00000005516 ENSMGAG00000005485 ENSMGAG00000005458 ENSMGAG00000019265 ENSMGAG00000005408 ENSMGAG00000005391 ENSMGAG00000018196 ENSMGAG00000019928 ENSMGAG00000022178 ENSMGAG00000019535 Neognathae_b ANCESTRAL SPECIES 26 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 Passeriformes ANCESTRAL SPECIES 23 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 Passeriformes_d ANCESTRAL SPECIES 23 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.d ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 Flycatcher MODERN SPECIES 15 AZIN2 (ENSFALG00000000581) ENSFALG00000000579 ENSFALG00000024349 MACF1 (ENSFALG00000000559) ENSFALG00000025395 ENSFALG00000000545 PABPC4 (ENSFALG00000000543) HEYL (ENSFALG00000000542) NT5C1A (ENSFALG00000000539) HPCAL4 (ENSFALG00000000538) ENSFALG00000000537 ENSFALG00000028578 ENSFALG00000027711 MYCL (ENSFALG00000000526) MFSD2A (ENSFALG00000000524) CAP1 (ENSFALG00000000523) ##22 PPT1 (ENSFALG00000000522) RPL11 (ENSFALG00000000520) ENSFALG00000000519 PITHD1 (ENSFALG00000000518) LYPLA2 (ENSFALG00000028382) GALE (ENSFALG00000000514) HMGCL (ENSFALG00000000512) FUCA1 (ENSFALG00000000508) CNR2 (ENSFALG00000014254) SRSF10 (ENSFALG00000000505) PNRC2 (ENSFALG00000024462) ENSFALG00000000503 MYOM3 (ENSFALG00000000500) IL22RA1 (ENSFALG00000000499) ENSFALG00000000497 Passeriformes_g ANCESTRAL SPECIES 22 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.d ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 Medium ground finch MODERN SPECIES 139 RNF19B (ENSGFOG00000014237) AK2 (ENSGFOG00000014227) AZIN2 (ENSGFOG00000014223) ENSGFOG00000014222 ENSGFOG00000014220 MACF1 (ENSGFOG00000004176) ENSGFOG00000008303 PPIE (ENSGFOG00000008269) PABPC4 (ENSGFOG00000008247) HEYL (ENSGFOG00000008241) NT5C1A (ENSGFOG00000008231) HPCAL4 (ENSGFOG00000008225) ENSGFOG00000008210 TRIT1 (ENSGFOG00000008199) MFSD2A (ENSGFOG00000008188) CAP1 (ENSGFOG00000008167) ##22 PPT1 (ENSGFOG00000008143) RPL11 (ENSGFOG00000008137) ENSGFOG00000008122 PITHD1 (ENSGFOG00000008116) LYPLA2 (ENSGFOG00000008108) GALE (ENSGFOG00000008100) HMGCL (ENSGFOG00000008076) FUCA1 (ENSGFOG00000008062) CNR2 (ENSGFOG00000008053) ENSGFOG00000008050 PNRC2 (ENSGFOG00000008047) SRSF10 (ENSGFOG00000008029) ENSGFOG00000008022 MYOM3 (ENSGFOG00000007854) ENSGFOG00000007826 Passeroidea ANCESTRAL SPECIES 22 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000177851 ENSGT00940000165717 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.d ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 ENSGT00510000048978 Zebra finch MODERN SPECIES 16 AK2 (ENSTGUG00000026076) AZIN2 (ENSTGUG00000001325) NDUFS5 (ENSTGUG00000025826) MACF1 (ENSTGUG00000001293) ENSTGUG00000028464 PPIE (ENSTGUG00000001276) ENSTGUG00000020766 PABPC4 (ENSTGUG00000001266) HEYL (ENSTGUG00000025448) NT5C1A (ENSTGUG00000001264) ENSTGUG00000001249 TRIT1 (ENSTGUG00000001242) MYCL (ENSTGUG00000024187) MFSD2A (ENSTGUG00000001225) ENSTGUG00000023287 CAP1 (ENSTGUG00000001218) ##22 PPT1 (ENSTGUG00000001213) RPL11 (ENSTGUG00000001210) ENSTGUG00000001205 PITHD1 (ENSTGUG00000001201) LYPLA2 (ENSTGUG00000001198) GALE (ENSTGUG00000023286) HMGCL (ENSTGUG00000001195) FUCA1 (ENSTGUG00000001190) CNR2 (ENSTGUG00000001188) PNRC2 (ENSTGUG00000029009) SRSF10 (ENSTGUG00000024024) GRHL3 (ENSTGUG00000001153) ENSTGUG00000001176 MYOM3 (ENSTGUG00000001160) IL22RA1 (ENSTGUG00000028852) Common canary MODERN SPECIES 65 AK2 (ENSSCAG00000005103) AZIN2 (ENSSCAG00000005110) NDUFS5 (ENSSCAG00000005114) ENSSCAG00000005189 ENSSCAG00000005783 ENSSCAG00000006707 ENSSCAG00000006725 PABPC4 (ENSSCAG00000006756) HEYL (ENSSCAG00000006771) NT5C1A (ENSSCAG00000006780) HPCAL4 (ENSSCAG00000006786) ENSSCAG00000006789 TRIT1 (ENSSCAG00000006796) MYCL (ENSSCAG00000006801) MFSD2A (ENSSCAG00000006809) CAP1 (ENSSCAG00000006838) ##22 PPT1 (ENSSCAG00000006841) RPL11 (ENSSCAG00000006846) ENSSCAG00000006847 PITHD1 (ENSSCAG00000006853) LYPLA2 (ENSSCAG00000006857) GALE (ENSSCAG00000006860) HMGCL (ENSSCAG00000006869) FUCA1 (ENSSCAG00000006878) CNR2 (ENSSCAG00000006884) PNRC2 (ENSSCAG00000006887) SRSF10 (ENSSCAG00000006889) ENSSCAG00000006894 IL22RA1 (ENSSCAG00000006905) ENSSCAG00000006911 GRHL3 (ENSSCAG00000006915) Great tit MODERN SPECIES 15 AK2 (ENSPMJG00000006027) AZIN2 (ENSPMJG00000005987) NDUFS5 (ENSPMJG00000005985) ENSPMJG00000005464 MACF1 (ENSPMJG00000001187) ENSPMJG00000000857 PPIE (ENSPMJG00000000851) PABPC4 (ENSPMJG00000000829) HEYL (ENSPMJG00000000826) NT5C1A (ENSPMJG00000000821) HPCAL4 (ENSPMJG00000000816) ENSPMJG00000000803 TRIT1 (ENSPMJG00000000792) MYCL (ENSPMJG00000000784) MFSD2A (ENSPMJG00000000775) CAP1 (ENSPMJG00000000763) ##22 PPT1 (ENSPMJG00000000739) RPL11 (ENSPMJG00000000731) ENSPMJG00000000713 PITHD1 (ENSPMJG00000000708) LYPLA2 (ENSPMJG00000000692) GALE (ENSPMJG00000000656) HMGCL (ENSPMJG00000000643) FUCA1 (ENSPMJG00000000634) CNR2 (ENSPMJG00000000631) PNRC2 (ENSPMJG00000000625) SRSF10 (ENSPMJG00000000613) ENSPMJG00000000603 MYOM3 (ENSPMJG00000000328) ENSPMJG00000000312 ENSPMJG00000000281 Neognathae_c ANCESTRAL SPECIES 31 ENSGT00940000154576 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00910000144211.n.a ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000160519 ENSGT00940000164147 Golden eagle MODERN SPECIES 7 RNF19B (ENSACCG00020008872) AK2 (ENSACCG00020008931) AZIN2 (ENSACCG00020008960) NDUFS5 (ENSACCG00020008974) MACF1 (ENSACCG00020014189) ENSACCG00020016662 PPIE (ENSACCG00020016665) PABPC4 (ENSACCG00020016670) HEYL (ENSACCG00020016681) NT5C1A (ENSACCG00020016683) HPCAL4 (ENSACCG00020016687) ENSACCG00020016692 TRIT1 (ENSACCG00020016696) MYCL (ENSACCG00020016702) MFSD2A (ENSACCG00020016720) CAP1 (ENSACCG00020016734) ##22 PPT1 (ENSACCG00020016739) SLC17A4 (ENSACCG00020016742) RPL11 (ENSACCG00020016745) ENSACCG00020008198 ENSACCG00020008210 PITHD1 (ENSACCG00020008228) LYPLA2 (ENSACCG00020008242) GALE (ENSACCG00020008267) HMGCL (ENSACCG00020008306) FUCA1 (ENSACCG00020008316) CNR2 (ENSACCG00020008327) ENSACCG00020008337 PNRC2 (ENSACCG00020008343) SRSF10 (ENSACCG00020008355) ENSACCG00020008361 Kakapo MODERN SPECIES 6 AK2 (ENSSHBG00005006521) AZIN2 (ENSSHBG00005006553) NDUFS5 (ENSSHBG00005006581) MACF1 (ENSSHBG00005008256) ENSSHBG00005018704 ENSSHBG00005018713 ENSSHBG00005018719 PABPC4 (ENSSHBG00005018728) HEYL (ENSSHBG00005018739) NT5C1A (ENSSHBG00005018743) HPCAL4 (ENSSHBG00005018749) ENSSHBG00005018756 TRIT1 (ENSSHBG00005018762) MYCL (ENSSHBG00005018769) MFSD2A (ENSSHBG00005018777) CAP1 (ENSSHBG00005018785) ##22 PPT1 (ENSSHBG00005018788) RPL11 (ENSSHBG00005018793) ENSSHBG00005018797 ENSSHBG00005018801 PITHD1 (ENSSHBG00005018805) LYPLA2 (ENSSHBG00005018807) GALE (ENSSHBG00005018810) HMGCL (ENSSHBG00005018817) FUCA1 (ENSSHBG00005018821) ENSSHBG00005018833 FNDC5 (ENSSHBG00005018843) YARS1 (ENSSHBG00005018851) KIAA1522 (ENSSHBG00005018860) SYNC (ENSSHBG00005018868) RBBP4 (ENSSHBG00005018877) African ostrich MODERN SPECIES 380 ENSSCUG00000001739 MFSD2A (ENSSCUG00000001741) CAP1 (ENSSCUG00000001748) ##22 PPT1 (ENSSCUG00000001754) SLC17A4 (ENSSCUG00000001761) RPL11 (ENSSCUG00000001766) ENSSCUG00000001771 ENSSCUG00000001775 PITHD1 (ENSSCUG00000001779) LYPLA2 (ENSSCUG00000001784) GALE (ENSSCUG00000001790) HMGCL (ENSSCUG00000001796) FUCA1 (ENSSCUG00000001801) CNR2 (ENSSCUG00000001803) ENSSCUG00000001804 PNRC2 (ENSSCUG00000001809) SRSF10 (ENSSCUG00000001813) ENSSCUG00000001817 Australian saltwater crocodile MODERN SPECIES 57 AZIN2 (ENSCPRG00005015569) NDUFS5 (ENSCPRG00005015571) ENSCPRG00005015575 ENSCPRG00005015582 ENSCPRG00005015669 ENSCPRG00005015777 ENSCPRG00005015789 PABPC4 (ENSCPRG00005015886) HEYL (ENSCPRG00005016232) NT5C1A (ENSCPRG00005016235) HPCAL4 (ENSCPRG00005016237) ENSCPRG00005016239 TRIT1 (ENSCPRG00005016250) MYCL (ENSCPRG00005016254) ENSCPRG00005016264 CAP1 (ENSCPRG00005016316) ##22 PPT1 (ENSCPRG00005016429) SLC17A4 (ENSCPRG00005016433) ENSCPRG00005016449 ENSCPRG00005016468 RPL11 (ENSCPRG00005016471) ENSCPRG00005016476 ENSCPRG00005016479 LYPLA2 (ENSCPRG00005016486) GALE (ENSCPRG00005016501) HMGCL (ENSCPRG00005016550) FUCA1 (ENSCPRG00005016551) CNR2 (ENSCPRG00005016552) PNRC2 (ENSCPRG00005016555) SRSF10 (ENSCPRG00005016560) ENSCPRG00005016562 Cryptodira ANCESTRAL SPECIES 31 ENSGT00940000158451 ENSGT00940000154576 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00940000162741 ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 Testudinoidea ANCESTRAL SPECIES 27 ENSGT00940000154576 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00960000191201 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00940000162741.l.b ENSGT00940000162741.l.a ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 Testudinidae ANCESTRAL SPECIES 4 ENSGT00940000158451 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00960000191201 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00940000162741.l.b ENSGT00940000162741.l.a ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197.bb ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 Abingdon island giant tortoise MODERN SPECIES 1418 ENSCABG00000002106 ENSCABG00000002104 ENSCABG00000002100 ENSCABG00000002064 PPIE (ENSCABG00000002061) PABPC4 (ENSCABG00000002053) HEYL (ENSCABG00000002051) NT5C1A (ENSCABG00000002048) HPCAL4 (ENSCABG00000002040) ENSCABG00000002037 TRIT1 (ENSCABG00000002035) ENSCABG00000002033 ENSCABG00000002032 ENSCABG00000002031 ENSCABG00000002029 CAP1 (ENSCABG00000002027) ##22 PPT1 (ENSCABG00000002026) SLC17A4 (ENSCABG00000002023) ENSCABG00000002019 ENSCABG00000002017 ENSCABG00000002015 ENSCABG00000002013 ENSCABG00000002011 ENSCABG00000002010 ENSCABG00000002007 GALE (ENSCABG00000001983) HMGCL (ENSCABG00000001979) FUCA1 (ENSCABG00000001978) CNR2 (ENSCABG00000001976) PNRC2 (ENSCABG00000001975) SRSF10 (ENSCABG00000001973) Goode s thornscrub tortoise MODERN SPECIES 12 AZIN2 (ENSGEVG00005009485) ENSGEVG00005009879 MACF1 (ENSGEVG00005014774) ENSGEVG00005021081 PPIE (ENSGEVG00005021083) ENSGEVG00005021084 PABPC4 (ENSGEVG00005021085) HEYL (ENSGEVG00005021092) NT5C1A (ENSGEVG00005021094) HPCAL4 (ENSGEVG00005021096) ENSGEVG00005021098 TRIT1 (ENSGEVG00005021099) ENSGEVG00005021103 ENSGEVG00005021104 MFSD2A (ENSGEVG00005021108) CAP1 (ENSGEVG00005021114) ##22 PPT1 (ENSGEVG00005021118) SLC17A4 (ENSGEVG00005021123) ENSGEVG00005021133 ENSGEVG00005021135 RPL11 (ENSGEVG00005021139) ENSGEVG00005021142 ENSGEVG00005021145 PITHD1 (ENSGEVG00005021147) ENSGEVG00005021152 GALE (ENSGEVG00005021156) HMGCL (ENSGEVG00005021158) FUCA1 (ENSGEVG00005021161) CNR2 (ENSGEVG00005021162) ENSGEVG00005021164 PNRC2 (ENSGEVG00005021165) Emydidae ANCESTRAL SPECIES 39 ENSGT00950000182995.e.a.a.b ENSGT00390000002919 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214.a ENSGT00390000015214.b ENSGT00940000158613 ENSGT00960000191201 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000160894 ENSGT00940000162741.l.b ENSGT00940000162741.l.a ENSGT00910000144211.o ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 Three-toed box turtle MODERN SPECIES 111 NDUFS5 (ENSTMTG00000016875) ENSTMTG00000016079 ENSTMTG00000015732 ENSTMTG00000015701 PPIE (ENSTMTG00000015665) PABPC4 (ENSTMTG00000014585) HEYL (ENSTMTG00000014501) NT5C1A (ENSTMTG00000014465) HPCAL4 (ENSTMTG00000014439) ENSTMTG00000014418 ENSTMTG00000014397 ENSTMTG00000014383 ENSTMTG00000014375 ENSTMTG00000014362 MFSD2A (ENSTMTG00000014333) CAP1 (ENSTMTG00000014303) ##22 PPT1 (ENSTMTG00000014284) SLC17A4 (ENSTMTG00000014258) ENSTMTG00000014222 ENSTMTG00000014197 RPL11 (ENSTMTG00000014190) ENSTMTG00000014179 ENSTMTG00000014156 PITHD1 (ENSTMTG00000014138) LYPLA2 (ENSTMTG00000014122) GALE (ENSTMTG00000014106) HMGCL (ENSTMTG00000014093) FUCA1 (ENSTMTG00000014082) CNR2 (ENSTMTG00000014074) ENSTMTG00000014067 PNRC2 (ENSTMTG00000014060) painted turtle MODERN SPECIES 757 AZIN2 (ENSCPBG00000010982) NDUFS5 (ENSCPBG00000010979) MACF1 (ENSCPBG00000003247) ENSCPBG00000001438 PPIE (ENSCPBG00000001090) PABPC4 (ENSCPBG00000001038) HEYL (ENSCPBG00000001029) NT5C1A (ENSCPBG00000001012) HPCAL4 (ENSCPBG00000000997) ENSCPBG00000000957 ENSCPBG00000000908 ENSCPBG00000000888 MYCL (ENSCPBG00000000873) ENSCPBG00000000859 MFSD2A (ENSCPBG00000000842) CAP1 (ENSCPBG00000000804) ##22 PPT1 (ENSCPBG00000000782) ENSCPBG00000000748 SLC17A4 (ENSCPBG00000000712) ENSCPBG00000000646 RPL11 (ENSCPBG00000000630) ENSCPBG00000000610 ENSCPBG00000000589 PITHD1 (ENSCPBG00000000565) LYPLA2 (ENSCPBG00000000554) GALE (ENSCPBG00000000537) HMGCL (ENSCPBG00000000518) FUCA1 (ENSCPBG00000000504) CNR2 (ENSCPBG00000000494) PNRC2 (ENSCPBG00000000483) SRSF10 (ENSCPBG00000000469) Chinese turtle MODERN SPECIES 444 ENSPSIG00000001861 MFSD2A (ENSPSIG00000015671) CAP1 (ENSPSIG00000015535) ##22 PPT1 (ENSPSIG00000015176) SLC17A4 (ENSPSIG00000014276) Lepidosauria ANCESTRAL SPECIES 18 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00940000155272 ENSGT00940000177851 ENSGT00940000158790 ENSGT00940000154788 ENSGT00940000161351 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000178962 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 Episquamata ANCESTRAL SPECIES 7 ENSGT00940000164972 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT01030000235992 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 Toxicofera ANCESTRAL SPECIES 24 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00940000164147 ENSGT00940000158669 ENSGT00940000161366 Elapidae ANCESTRAL SPECIES 9 ENSGT00940000164972 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000155256 ENSGT00940000158568.bb.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT01070000254078.h ENSGT01070000254078.g ENSGT00940000164147 Indian cobra MODERN SPECIES 11 ADPRS (ENSNNAG00000003788) ENSNNAG00000003814 ENSNNAG00000003869 TRAPPC3 (ENSNNAG00000003916) AGO3 (ENSNNAG00000003944) ENSNNAG00000003994 ENSNNAG00000004037 AGO4 (ENSNNAG00000004226) CLSPN (ENSNNAG00000004320) C1orf216 (ENSNNAG00000004613) PSMB2 (ENSNNAG00000004625) TFAP2E (ENSNNAG00000004641) NCDN (ENSNNAG00000004667) KIAA0319L (ENSNNAG00000004866) MFSD2A (ENSNNAG00000006398) CAP1 (ENSNNAG00000006446) ##22 PPT1 (ENSNNAG00000006467) RPL11 (ENSNNAG00000006486) ENSNNAG00000006508 ENSNNAG00000006525 PITHD1 (ENSNNAG00000006613) LYPLA2 (ENSNNAG00000006635) GALE (ENSNNAG00000006671) HMGCL (ENSNNAG00000006710) FUCA1 (ENSNNAG00000006762) CNR2 (ENSNNAG00000006837) PNRC2 (ENSNNAG00000006845) SRSF10 (ENSNNAG00000006857) ENSNNAG00000006871 ENSNNAG00000006880 ENSNNAG00000006903 Elapidae_a ANCESTRAL SPECIES 15 ENSGT00940000164972 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000155256 ENSGT00940000158568.bb.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT01070000254078.h ENSGT01070000254078.g ENSGT00940000164147 Acanthophiinae ANCESTRAL SPECIES 22 ENSGT00940000164972 ENSGT00950000182894.D ENSGT00390000015369 ENSGT00940000154317.a.a ENSGT00390000003880.b.a ENSGT00940000155256 ENSGT00940000158568.bb.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00910000144211.n.a ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT01070000254078.h ENSGT01070000254078.g ENSGT00940000164147 Eastern brown snake MODERN SPECIES 19 ZMYM4 (ENSPTXG00000002416) ENSPTXG00000002031 ENSPTXG00000002030 ADPRS (ENSPTXG00000002029) COL8A2 (ENSPTXG00000002027) TRAPPC3 (ENSPTXG00000002025) AGO1 (ENSPTXG00000002024) AGO3 (ENSPTXG00000002013) CLSPN (ENSPTXG00000001973) C1orf216 (ENSPTXG00000001966) PSMB2 (ENSPTXG00000001965) TFAP2E (ENSPTXG00000001764) NCDN (ENSPTXG00000001759) KIAA0319L (ENSPTXG00000001757) MFSD2A (ENSPTXG00000001754) CAP1 (ENSPTXG00000001751) ##22 PPT1 (ENSPTXG00000001749) RPL11 (ENSPTXG00000001747) ENSPTXG00000001745 ENSPTXG00000001742 PITHD1 (ENSPTXG00000001740) LYPLA2 (ENSPTXG00000001736) GALE (ENSPTXG00000001733) HMGCL (ENSPTXG00000001730) FUCA1 (ENSPTXG00000001724) CNR2 (ENSPTXG00000001721) PNRC2 (ENSPTXG00000001718) SRSF10 (ENSPTXG00000001715) ENSPTXG00000001714 ENSPTXG00000001712 ENSPTXG00000001710 Mainland tiger snake MODERN SPECIES 138 ENSNSUG00000019735 TEKT2 (ENSNSUG00000019736) ADPRS (ENSNSUG00000019737) ENSNSUG00000019738 TRAPPC3 (ENSNSUG00000019740) AGO3 (ENSNSUG00000019741) AGO1 (ENSNSUG00000019762) AGO4 (ENSNSUG00000019763) CLSPN (ENSNSUG00000019773) C1orf216 (ENSNSUG00000019779) PSMB2 (ENSNSUG00000019780) TFAP2E (ENSNSUG00000019781) NCDN (ENSNSUG00000019783) KIAA0319L (ENSNSUG00000019796) MFSD2A (ENSNSUG00000019799) CAP1 (ENSNSUG00000019800) ##22 PPT1 (ENSNSUG00000019801) RPL11 (ENSNSUG00000019802) ENSNSUG00000019803 ENSNSUG00000019804 PITHD1 (ENSNSUG00000019805) LYPLA2 (ENSNSUG00000019806) GALE (ENSNSUG00000019807) HMGCL (ENSNSUG00000019808) FUCA1 (ENSNSUG00000019809) CNR2 (ENSNSUG00000019810) PNRC2 (ENSNSUG00000019811) SRSF10 (ENSNSUG00000019812) ENSNSUG00000019813 ENSNSUG00000019814 ENSNSUG00000019815 Blue-lipped sea krait MODERN SPECIES 4931 MFSD2A (ENSLLTG00000008200) CAP1 (ENSLLTG00000008109) ##22 Lizard MODERN SPECIES 1110 ENSACAG00000023858 ENSACAG00000004683 MFSD2A (ENSACAG00000004894) ENSACAG00000004929 ##22 PPT1 (ENSACAG00000005000) RPL11 (ENSACAG00000005058) ENSACAG00000005097 ENSACAG00000005103 PITHD1 (ENSACAG00000040848) LYPLA2 (ENSACAG00000005161) GALE (ENSACAG00000005183) ENSACAG00000005229 HMGCL (ENSACAG00000005231) FUCA1 (ENSACAG00000005280) CNR2 (ENSACAG00000005323) ENSACAG00000005326 SRSF10 (ENSACAG00000005327) ENSACAG00000005346 MYOM3 (ENSACAG00000005357) Laterata ANCESTRAL SPECIES 36 ENSGT00940000164972 ENSGT00390000003880.b.a ENSGT00940000154317.a.a ENSGT00390000015369 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183029.B.d ENSGT00910000144211.o ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398.h ENSGT00490000043398.g ENSGT00940000156197 ENSGT00940000158000 ENSGT00940000158484 ENSGT00440000035378.c ENSGT01060000248564.a.b ENSGT00530000063881.a.b ENSGT00940000154450 Argentine black and white tegu MODERN SPECIES 117 TRAPPC3 (ENSSMRG00000000884) COL8A2 (ENSSMRG00000000866) ADPRS (ENSSMRG00000000851) TEKT2 (ENSSMRG00000000826) AGO3 (ENSSMRG00000000795) AGO1 (ENSSMRG00000000771) AGO4 (ENSSMRG00000000748) CLSPN (ENSSMRG00000000727) C1orf216 (ENSSMRG00000000717) PSMB2 (ENSSMRG00000000706) TFAP2E (ENSSMRG00000000694) NCDN (ENSSMRG00000000686) KIAA0319L (ENSSMRG00000000634) MFSD2A (ENSSMRG00000000547) CAP1 (ENSSMRG00000000506) ##22 PPT1 (ENSSMRG00000000489) ENSSMRG00000000473 RPL11 (ENSSMRG00000000323) ENSSMRG00000000314 ENSSMRG00000000289 C1orf109 (ENSSMRG00000000245) PITHD1 (ENSSMRG00000000229) LYPLA2 (ENSSMRG00000000196) GALE (ENSSMRG00000000133) RHBDL2 (ENSSMRG00000000112) MYCBP (ENSSMRG00000000089) RRAGC (ENSSMRG00000000086) ENSSMRG00000000031 UTP11 (ENSSMRG00000020814) FHL3 (ENSSMRG00000020813) Common wall lizard MODERN SPECIES 16 COL8A2 (ENSPMRG00000011302) ADPRS (ENSPMRG00000011296) TEKT2 (ENSPMRG00000011285) AGO3 (ENSPMRG00000011185) AGO1 (ENSPMRG00000010343) AGO4 (ENSPMRG00000009986) CLSPN (ENSPMRG00000009895) C1orf216 (ENSPMRG00000009878) PSMB2 (ENSPMRG00000009867) TFAP2E (ENSPMRG00000009858) NCDN (ENSPMRG00000009848) ENSPMRG00000009664 ENSPMRG00000009500 ENSPMRG00000009464 MFSD2A (ENSPMRG00000009360) CAP1 (ENSPMRG00000009331) ##22 PPT1 (ENSPMRG00000009325) ENSPMRG00000009319 RPL11 (ENSPMRG00000009314) ENSPMRG00000009297 ENSPMRG00000009291 ENSPMRG00000009284 LYPLA2 (ENSPMRG00000009278) GALE (ENSPMRG00000009268) ENSPMRG00000009263 HMGCL (ENSPMRG00000009260) FUCA1 (ENSPMRG00000009251) CNR2 (ENSPMRG00000009246) ENSPMRG00000009240 ENSPMRG00000009235 ENSPMRG00000009224 tuatara MODERN SPECIES 1719 ENSSPUG00000003125 PPIE (ENSSPUG00000003147) PABPC4 (ENSSPUG00000003204) HEYL (ENSSPUG00000003299) NT5C1A (ENSSPUG00000003317) HPCAL4 (ENSSPUG00000003336) ENSSPUG00000003365 TRIT1 (ENSSPUG00000003472) ENSSPUG00000003530 MYCL (ENSSPUG00000003545) MFSD2A (ENSSPUG00000003562) CAP1 (ENSSPUG00000003576) ##22 ENSSPUG00000003591 ENSSPUG00000003612 ENSSPUG00000003622 ENSSPUG00000003644 ENSSPUG00000003655 Anura ANCESTRAL SPECIES 99 ENSGT00940000158790 ENSGT00940000154788 ENSGT00390000017767.b.b ENSGT00940000161166 ENSGT00390000015159.a.a ENSGT00390000015214 ENSGT00940000158613 ENSGT00390000005318.b.b.b ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000162741 ENSGT00910000144211 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000158000 ENSGT00440000035378.c ENSGT00940000159125 ENSGT00940000155824.C ENSGT00390000002919 ENSGT00950000182995.e.a.b ENSGT00950000182995.e.a.a.b ENSGT00940000154576 ENSGT00940000158451 Leishan spiny toad DUPLICATION Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 5 ENSLLEG00000001912 INPP4A (ENSLLEG00000001549) COA5 (ENSLLEG00000001426) UNC50 (ENSLLEG00000001403) MGAT4A (ENSLLEG00000001320) ENSLLEG00000001293 CRACDL (ENSLLEG00000001259) TSGA10 (ENSLLEG00000001181) ENSLLEG00000000821 ENSLLEG00000000784 MITD1 (ENSLLEG00000000740) TXNDC9 (ENSLLEG00000000689) EIF5B (ENSLLEG00000000628) ENSLLEG00000000612 REV1 (ENSLLEG00000000564) ENSLLEG00000015731 ##22 ENSLLEG00000015672 ENSLLEG00000015649 AFF3 (ENSLLEG00000015254) ENSLLEG00000015201 LONRF2 (ENSLLEG00000014987) ENSLLEG00000014942 TMEM255B (ENSLLEG00000014876) ENSLLEG00000014856 GAS6 (ENSLLEG00000014643) ENSLLEG00000014122 ENSLLEG00000014076 ENSLLEG00000014009 CDC16 (ENSLLEG00000013727) UPF3A (ENSLLEG00000013188) ENSLLEG00000013115 Leishan spiny toad MODERN SPECIES 5 PTRH2 (ENSLLEG00000006189) ENSLLEG00000006240 ENSLLEG00000006270 PABPC4 (ENSLLEG00000006479) NT5C1A (ENSLLEG00000007297) ENSLLEG00000007344 HPCAL4 (ENSLLEG00000007356) ENSLLEG00000007421 ENSLLEG00000007501 TRIT1 (ENSLLEG00000007516) ENSLLEG00000007569 ENSLLEG00000007582 MYCL (ENSLLEG00000007604) ENSLLEG00000007622 MFSD2A (ENSLLEG00000007641) ENSLLEG00000007719 ##22 PPT1 (ENSLLEG00000007952) ENSLLEG00000008009 RPL11 (ENSLLEG00000008072) ENSLLEG00000008280 PITHD1 (ENSLLEG00000008340) LYPLA2 (ENSLLEG00000008415) ENSLLEG00000008556 GALE (ENSLLEG00000008595) FUCA1 (ENSLLEG00000008767) VAV1 (ENSLLEG00000009101) MACF1 (ENSLLEG00000009624) UBE2G1 (ENSLLEG00000010904) ANKFY1 (ENSLLEG00000011012) CYB5D2 (ENSLLEG00000011247) ZZEF1 (ENSLLEG00000011346) Leishan spiny toad MODERN SPECIES 9 ENSLLEG00000016412 ENSLLEG00000016575 ENSLLEG00000016625 ENSLLEG00000016851 ENSLLEG00000016922 ENSLLEG00000017095 ENSLLEG00000017180 ENSLLEG00000017257 ENSLLEG00000017318 ENSLLEG00000017377 ENSLLEG00000017443 ENSLLEG00000017470 ENSLLEG00000017521 ENSLLEG00000017559 ENSLLEG00000017635 ENSLLEG00000018287 ##22 ENSLLEG00000018648 ENSLLEG00000018683 ENSLLEG00000018706 ENSLLEG00000018751 ENSLLEG00000018801 ENSLLEG00000018836 ENSLLEG00000018867 ENSLLEG00000018887 ENSLLEG00000018920 ENSLLEG00000018953 ENSLLEG00000018989 ENSLLEG00000019006 ENSLLEG00000019028 ENSLLEG00000019071 ENSLLEG00000019087 Frog MODERN SPECIES 2 cltc (ENSXETG00000010738) ENSXETG00000042881 dhx40 (ENSXETG00000010939) rpl23a (ENSXETG00000026189) ypel2 (ENSXETG00000040712) bmp8 (ENSXETG00000010940) ppie (ENSXETG00000010944) pabpc4 (ENSXETG00000010946) ENSXETG00000043250 nt5c1b (ENSXETG00000037368) hpcal4 (ENSXETG00000036709) XB5901009 [provisional] (ENSXETG00000010951) trit1 (ENSXETG00000010952) mycl (ENSXETG00000010956) mfsd2a (ENSXETG00000001185) cap1 (ENSXETG00000001184) ##22 ppt1 (ENSXETG00000001183) eef1a1o (ENSXETG00000022604) ENSXETG00000045098 rpl11 (ENSXETG00000001178) eloa (ENSXETG00000001176) lypla2 (ENSXETG00000025533) gale (ENSXETG00000001170) fuca1 (ENSXETG00000046499) vav1 (ENSXETG00000007366) macf1 (ENSXETG00000007367) ndufs5 (ENSXETG00000007371) ENSXETG00000037979 ENSXETG00000040919 azin2 (ENSXETG00000007373) ak2 (ENSXETG00000027867) Coelacanth MODERN SPECIES 409 OSCP1 (ENSLACG00000011564) PABPC4 (ENSLACG00000011907) ENSLACG00000012215 ENSLACG00000012473 NT5C1A (ENSLACG00000012671) MFSD2A (ENSLACG00000012951) MYCL (ENSLACG00000013771) TRIT1 (ENSLACG00000013861) fam49al (ENSLACG00000014201) hpcal4 (ENSLACG00000014888) CAP1 (ENSLACG00000014998) ##22 PPT1 (ENSLACG00000015155) ENSLACG00000015216 eef1a1l1 (ENSLACG00000015342) ENSLACG00000015392 MACO1 (ENSLACG00000015510) ENSLACG00000015690 TMEM50A (ENSLACG00000015760) MAN1C1 (ENSLACG00000015845) ENSLACG00000016044 ENSLACG00000016086 SLC30A2 (ENSLACG00000016311) TRIM63 (ENSLACG00000016332) PDIK1L (ENSLACG00000016419) FAM110D (ENSLACG00000016477) CATSPER4 (ENSLACG00000016509) Actinopterygii ANCESTRAL SPECIES 191 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000015369 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000154325.b ENSGT00940000159550 Neopterygii ANCESTRAL SPECIES 196 ENSGT00950000182894.D ENSGT00940000155256 ENSGT00940000158568 ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000015369 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 Osteoglossocephalai ANCESTRAL SPECIES 25 ENSGT00390000010887.b ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C ENSGT00980000198642 Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00390000010887.b ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00390000001867 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j ENSGT01050000244827.E.f ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000159550.g ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000155824.C P. kingsleyae MODERN SPECIES 27 ENSPKIG00000022263 ENSPKIG00000022335 ENSPKIG00000022438 ENSPKIG00000022486 ENSPKIG00000022520 cdca8 (ENSPKIG00000022545) c19h1orf109 (ENSPKIG00000022562) ENSPKIG00000022578 ago4 (ENSPKIG00000022598) CLSPN (ENSPKIG00000022647) ENSPKIG00000022675 psmb2 (ENSPKIG00000022685) tfap2e (ENSPKIG00000022714) NCDN (ENSPKIG00000022739) ENSPKIG00000022762 cap1 (ENSPKIG00000022783) ##22 ppt1 (ENSPKIG00000022808) ENSPKIG00000022835 ENSPKIG00000022865 ENSPKIG00000022886 ENSPKIG00000022899 ENSPKIG00000022911 rpl11 (ENSPKIG00000022926) ENSPKIG00000022938 eloa (ENSPKIG00000022960) pithd1 (ENSPKIG00000022990) lypla2 (ENSPKIG00000023009) sfpq (ENSPKIG00000023035) ZMYM4 (ENSPKIG00000023057) ak2 (ENSPKIG00000023102) rnf19b (ENSPKIG00000023127) Asian bonytongue MODERN SPECIES 15 zgc:114119 (ENSSFOG00015021849) ENSSFOG00015021854 ENSSFOG00015021896 ENSSFOG00015021910 ENSSFOG00015021938 cdca8 (ENSSFOG00015021970) C1orf109 (ENSSFOG00015021989) ENSSFOG00015022008 ago4 (ENSSFOG00015022028) CLSPN (ENSSFOG00015022075) ENSSFOG00015029261 psmb2 (ENSSFOG00015022111) tfap2e (ENSSFOG00015025522) NCDN (ENSSFOG00015022278) KIAA0319L (ENSSFOG00015022311) cap1 (ENSSFOG00015022342) ##22 ppt1 (ENSSFOG00015022355) ENSSFOG00015022372 eef1a1l1 (ENSSFOG00015022408) ENSSFOG00015030161 rpl11 (ENSSFOG00015022461) ENSSFOG00015022469 eloa (ENSSFOG00015022482) pithd1 (ENSSFOG00015022511) lypla2 (ENSSFOG00015029087) sfpq (ENSSFOG00015028929) ENSSFOG00015009224 ak2 (ENSSFOG00015009206) rnf19b (ENSSFOG00015009175) ndufs5 (ENSSFOG00015024412) bmp8a (ENSSFOG00015030359) Clupeocephala ANCESTRAL SPECIES 40 ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00980000199207 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000166582 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000155824.C.ec.a ENSGT00940000165766 Otomorpha ANCESTRAL SPECIES 96 ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00980000199207 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000166582 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 Clupeiformes ANCESTRAL SPECIES 250 ENSGT00390000012738 ENSGT00980000199207 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000166582 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000155824.C.fc Denticle herring DUPLICATION Denticle herring MODERN SPECIES 12 GABBR1 (ENSDCDG00000028685) ENSDCDG00000028683 SH3BP5L (ENSDCDG00000028681) gtf2h4 (ENSDCDG00000028453) polr1h (ENSDCDG00000028448) ddx39b (ENSDCDG00000028412) mgat1b (ENSDCDG00000028409) vars2 (ENSDCDG00000023826) ppp1r11 (ENSDCDG00000023759) ENSDCDG00000023758 ENSDCDG00000023755 psmb2 (ENSDCDG00000025825) tfap2e (ENSDCDG00000025820) NCDN (ENSDCDG00000025814) KIAA0319L (ENSDCDG00000024599) cap1 (ENSDCDG00000024085) ##22 ppt1 (ENSDCDG00000024058) ENSDCDG00000024052 ybx1 (ENSDCDG00000024051) ENSDCDG00000024048 ENSDCDG00000024045 ENSDCDG00000024034 ENSDCDG00000024027 ENSDCDG00000024025 ENSDCDG00000024013 ENSDCDG00000024010 ENSDCDG00000023965 ENSDCDG00000023951 rpl11 (ENSDCDG00000023931) ENSDCDG00000023926 eloa (ENSDCDG00000023921) Denticle herring MODERN SPECIES 22 ENSDCDG00000006134 SH3BP5L (ENSDCDG00000006173) gtf2h4 (ENSDCDG00000006429) polr1h (ENSDCDG00000007747) ddx39b (ENSDCDG00000007751) mgat1b (ENSDCDG00000007790) vars2 (ENSDCDG00000008489) ppp1r11 (ENSDCDG00000018321) ENSDCDG00000018330 ENSDCDG00000018334 psmb2 (ENSDCDG00000018338) tfap2e (ENSDCDG00000018346) NCDN (ENSDCDG00000018357) KIAA0319L (ENSDCDG00000018375) cap1 (ENSDCDG00000019287) ##22 ppt1 (ENSDCDG00000019335) ENSDCDG00000019613 Atlantic herring MODERN SPECIES 10 ENSCHAG00000010419 ENSCHAG00000010425 ENSCHAG00000010443 si:ch211-195b13.1 (ENSCHAG00000010903) ENSCHAG00000011971 nup88 (ENSCHAG00000012022) myo1g (ENSCHAG00000012249) si:dkeyp-92c9.2 (ENSCHAG00000012772) ENSCHAG00000012782 CLSPN (ENSCHAG00000012798) ENSCHAG00000013102 psmb2 (ENSCHAG00000013111) tfap2e (ENSCHAG00000013149) NCDN (ENSCHAG00000013240) KIAA0319L (ENSCHAG00000013267) cap1 (ENSCHAG00000014608) ##22 ppt1 (ENSCHAG00000015280) ENSCHAG00000015430 eef1a1l1 (ENSCHAG00000015444) rpl11 (ENSCHAG00000015580) ENSCHAG00000015654 eloa (ENSCHAG00000015663) pithd1 (ENSCHAG00000015692) lypla2 (ENSCHAG00000015735) sfpq (ENSCHAG00000015820) ENSCHAG00000015848 ENSCHAG00000016197 rnf19b (ENSCHAG00000016217) ndufs5 (ENSCHAG00000016290) MACF1 (ENSCHAG00000016376) bmp8a (ENSCHAG00000022199) Otophysi ANCESTRAL SPECIES 39 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000165758 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 Characiphysae ANCESTRAL SPECIES 10 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000165758 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 Channel catfish MODERN SPECIES 16 pum1 (ENSIPUG00000020421) sdc3 (ENSIPUG00000020392) nobox (ENSIPUG00000020371) LAPTM4A (ENSIPUG00000020348) matn1 (ENSIPUG00000020337) sesn2 (ENSIPUG00000020323) fgr (ENSIPUG00000020219) ahdc1 (ENSIPUG00000020214) ENSIPUG00000020205 wasf2 (ENSIPUG00000020198) gpr3 (ENSIPUG00000020193) cd164l2 (ENSIPUG00000020166) ENSIPUG00000020141 fam83h (ENSIPUG00000020131) KIAA0319L (ENSIPUG00000020105) CAP1 (ENSIPUG00000020066) ##22 ppt1 (ENSIPUG00000020038) ENSIPUG00000019972 ENSIPUG00000019957 ENSIPUG00000019880 ENSIPUG00000019867 rpl11 (ENSIPUG00000019795) ENSIPUG00000019774 tceb3 (ENSIPUG00000019763) pithd1 (ENSIPUG00000019752) lypla2 (ENSIPUG00000019714) gatad1 (ENSIPUG00000019694) nkd2l (ENSIPUG00000019668) lrrc14b (ENSIPUG00000019665) snrnp25 (ENSIPUG00000019654) ENSIPUG00000019642 Characiphysae_b ANCESTRAL SPECIES 1 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000165758 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 Electric eel MODERN SPECIES 173 ENSEEEG00000008107 si:ch211-199g17.9 (ENSEEEG00000008110) fam83hb (ENSEEEG00000008111) KIAA0319L (ENSEEEG00000008130) cap1 (ENSEEEG00000008420) ##22 ppt1 (ENSEEEG00000008453) ENSEEEG00000008510 ENSEEEG00000008535 ENSEEEG00000008900 rpl11 (ENSEEEG00000008901) ENSEEEG00000008903 eloa (ENSEEEG00000008905) pithd1 (ENSEEEG00000008906) lypla2 (ENSEEEG00000008908) ENSEEEG00000008925 gatad1 (ENSEEEG00000008928) ENSEEEG00000008930 lrrc14b (ENSEEEG00000008931) uqcrb (ENSEEEG00000008932) mterf3 (ENSEEEG00000008933) Characoidei ANCESTRAL SPECIES 3 ENSGT00510000047363 ENSGT00940000155058 ENSGT00940000159949 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638 ENSGT00950000183168.B.a ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000165758 ENSGT00390000018554 ENSGT00440000033589.d.b ENSGT01030000234531.C ENSGT00390000012916 Mexicana tetra MODERN SPECIES 15 nkain1 (ENSAMXG00000042549) pum1 (ENSAMXG00000020607) SDC3 (ENSAMXG00000020610) ENSAMXG00000037645 ENSAMXG00000037364 matn1 (ENSAMXG00000020612) sesn2 (ENSAMXG00000020616) yrk (ENSAMXG00000020619) AHDC1 (ENSAMXG00000025287) wasf2 (ENSAMXG00000020622) gpr3 (ENSAMXG00000036140) ENSAMXG00000020624 si:ch211-199g17.9 (ENSAMXG00000041603) fam83hb (ENSAMXG00000020626) KIAA0319L (ENSAMXG00000020627) cap1 (ENSAMXG00000020631) ##22 ppt1 (ENSAMXG00000036664) ENSAMXG00000020643 ENSAMXG00000029743 ENSAMXG00000020663 rpl11 (ENSAMXG00000034710) ENSAMXG00000030505 eloa (ENSAMXG00000029662) pithd1 (ENSAMXG00000038633) lypla2 (ENSAMXG00000038933) ankib1a (ENSAMXG00000020685) gatad1 (ENSAMXG00000039156) ENSAMXG00000020692 lrrc14b (ENSAMXG00000020693) uqcrb (ENSAMXG00000029368) mterf3 (ENSAMXG00000020695) Red-bellied piranha MODERN SPECIES 1 pum1 (ENSPNAG00000026728) SDC3 (ENSPNAG00000007081) ENSPNAG00000026558 ENSPNAG00000026544 matn1 (ENSPNAG00000007138) sesn2 (ENSPNAG00000006738) yrk (ENSPNAG00000004051) AHDC1 (ENSPNAG00000004726) ENSPNAG00000026358 wasf2 (ENSPNAG00000026345) gpr3 (ENSPNAG00000026328) ENSPNAG00000026316 si:ch211-199g17.9 (ENSPNAG00000026286) fam83hb (ENSPNAG00000026242) KIAA0319L (ENSPNAG00000026231) cap1 (ENSPNAG00000006261) ##22 ppt1 (ENSPNAG00000026191) ENSPNAG00000004013 ENSPNAG00000026137 ENSPNAG00000026105 ENSPNAG00000026075 rpl11 (ENSPNAG00000026061) ENSPNAG00000026024 eloa (ENSPNAG00000025986) pithd1 (ENSPNAG00000025972) lypla2 (ENSPNAG00000025943) ankib1a (ENSPNAG00000025893) gatad1 (ENSPNAG00000025686) ENSPNAG00000025661 lrrc14b (ENSPNAG00000025596) uqcrb (ENSPNAG00000025584) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00940000158079 ENSGT00940000160209 ENSGT00650000093445 ENSGT00940000175786 ENSGT00940000159638.g ENSGT00950000183168.B.a ENSGT00940000157554 ENSGT00390000018883 ENSGT00390000002881 ENSGT00950000182962.b.a ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352 ENSGT00940000159342.a ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000165758 ENSGT00390000018554.b ENSGT00460000042249 ENSGT00440000033589.d.b ENSGT01030000234531.C Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 59 ENSGT00390000002881 ENSGT00530000063583.b.k ENSGT00950000182962.b.b.t.a ENSGT01060000248564.b.a.a.b.f ENSGT00940000158349.n ENSGT00390000016034.`b.a ENSGT00940000175851 ENSGT00950000182962.b.a.b ENSGT01060000248564.b.a.a.a ENSGT00940000177340 ENSGT00390000017352.e ENSGT00940000159342.a.c ENSGT00390000017352.f ENSGT00940000159342.a.d ENSGT00940000157613.h ENSGT00390000017955.c.rb ##22 ENSGT00940000156790.gb ENSGT00940000166232.c ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E.h ENSGT00910000144211.k ENSGT00940000166197.c ENSGT00390000002428.a.b ENSGT00490000043398 ENSGT00940000156197.fb ENSGT00940000165758.b ENSGT00390000018554.b ENSGT00460000042249.a.a ENSGT00440000033589.d.b.a ENSGT01030000234531.C.f ENSGT00390000012916.cb Cyprininae_a ANCESTRAL SPECIES 1 ENSGT00940000155058.q ENSGT00940000159949.c ENSGT00940000158079.b ENSGT00940000160209.b ENSGT00650000093445.c ENSGT00940000175786.b ENSGT00940000159638.g.b ENSGT00950000183168.B.a.b ENSGT00940000157554.s.b ENSGT00390000018883.d ENSGT00950000182962.b.a.b ENSGT01060000248564.b.a.a.a.a ENSGT00530000063929.a.b.h.b ENSGT00940000159342.a.d ENSGT00940000157613.h ENSGT00390000017955.c.rb ##22 ENSGT00940000156790.gb ENSGT00940000166232.c ENSGT00940000162741 ENSGT01050000244827.E.h.a ENSGT00910000144211.j ENSGT00940000166197.c ENSGT00390000002428.a.b ENSGT00490000043398 ENSGT00940000156197.fb ENSGT00940000165758.b ENSGT00940000172048 ENSGT00460000042249.a.b.b ENSGT00390000018554.b.b ENSGT00460000042249.a.a ENSGT00440000033589.d.b.a Golden-line barbel MODERN SPECIES 115 si:ch211-199g17.9 (ENSSGRG00000011610) cap1 (ENSSGRG00000010401) ##22 ppt1 (ENSSGRG00000009962) ENSSGRG00000009933 ENSSGRG00000007505 ENSSGRG00000007460 rpl11 (ENSSGRG00000007428) ENSSGRG00000007420 eloa (ENSSGRG00000007416) lypla2 (ENSSGRG00000007295) ENSSGRG00000007287 ENSSGRG00000007277 ENSSGRG00000007271 zgc:86598 (ENSSGRG00000004876) hsf1 (ENSSGRG00000003421) scxa (ENSSGRG00000003388) bop1 (ENSSGRG00000001807) Common carp reference MODERN SPECIES 12 nkain1 (ENSCCRG00000050272) pum1 (ENSCCRG00000050210) SDC3 (ENSCCRG00000050207) ENSCCRG00000075270 ENSCCRG00000050193 matn1 (ENSCCRG00000050188) yrk (ENSCCRG00000028075) AHDC1 (ENSCCRG00000042824) ENSCCRG00000042892 wasf2 (ENSCCRG00000068336) gpr3 (ENSCCRG00000079101) CD164L2 (ENSCCRG00000042879) fam83hb (ENSCCRG00000062349) si:ch211-199g17.9 (ENSCCRG00000058716) ENSCCRG00000042278 cap1 (ENSCCRG00000041709) ##22 ppt1 (ENSCCRG00000041323) ENSCCRG00000041308 ENSCCRG00000041264 ENSCCRG00000041256 rpl11 (ENSCCRG00000056226) eloa (ENSCCRG00000041209) ENSCCRG00000067587 pithd1 (ENSCCRG00000076737) lypla2 (ENSCCRG00000040187) ankib1a (ENSCCRG00000040296) ENSCCRG00000040268 ENSCCRG00000040250 ENSCCRG00000040242 ENSCCRG00000040237 lrrc14b (ENSCCRG00000012040) Goldfish MODERN SPECIES 10 zcchc17 (ENSCARG00000029769) snrnp40 (ENSCARG00000029636) nkain1 (ENSCARG00000029596) pum1 (ENSCARG00000029238) ENSCARG00000029181 ENSCARG00000029176 matn1 (ENSCARG00000029150) sesn2 (ENSCARG00000029114) yrk (ENSCARG00000028409) AHDC1 (ENSCARG00000028377) wasf2 (ENSCARG00000028362) CD164L2 (ENSCARG00000028352) si:ch211-199g17.9 (ENSCARG00000028332) fam83hb (ENSCARG00000028324) KIAA0319L (ENSCARG00000027964) cap1 (ENSCARG00000027483) ##22 ppt1 (ENSCARG00000027147) ENSCARG00000027076 ENSCARG00000026858 ENSCARG00000026826 rpl11 (ENSCARG00000026802) ENSCARG00000026792 eloa (ENSCARG00000026782) pithd1 (ENSCARG00000026753) lypla2 (ENSCARG00000026592) ENSCARG00000026581 ankib1a (ENSCARG00000026542) ENSCARG00000026513 ENSCARG00000026481 ENSCARG00000026474 lrrc14b (ENSCARG00000026464) Cyprininae ANCESTRAL SPECIES 575 ENSGT00940000157613.g ENSGT00390000017955.c.sb ##22 ENSGT00940000156790.fb ENSGT00940000166232.d ENSGT00950000183029.B.j.g.a ENSGT00950000183029.A ENSGT00910000144211.j ENSGT00940000166197.d ENSGT00390000002428.a.a ENSGT00940000156197.gb ENSGT00940000165758.a ENSGT00940000175699 ENSGT01030000234531.C.e ENSGT00390000012916.bb ENSGT00390000005801.b ENSGT00940000154655.a.i.b.a ENSGT00940000155549.a.a.b.p.a Cyprininae_a ANCESTRAL SPECIES 124 ENSGT00940000158079.a ENSGT00940000160209.a ENSGT00650000093445.d ENSGT00940000175786.a ENSGT00940000159638.g.a ENSGT00950000183168.B.a.a ENSGT00940000157554.s.a ENSGT00390000018883.c ENSGT00950000182962.b.a.a ENSGT01060000248564.b.a.a.a.b ENSGT00530000063929.a.b.h.a ENSGT00940000177340 ENSGT00390000017352.e ENSGT00940000159342.a.c ENSGT00940000157613.g ENSGT00390000017955.c.sb ##22 ENSGT00940000156790.fb ENSGT00940000166232.d ENSGT00950000183029.B.j.g.a ENSGT00950000183029.B.j.g.b ENSGT01050000244827.E.h.b ENSGT00910000144211.k ENSGT00940000166197.d ENSGT00390000002428.a.a ENSGT00940000156197.gb ENSGT00940000165758.a ENSGT00940000175699 ENSGT01030000234531.C.e ENSGT00390000012916.bb ENSGT00390000005801.b ENSGT00940000154655.a.i.b.a Common carp reference MODERN SPECIES 31 snrnp40 (ENSCCRG00000079296) pum1 (ENSCCRG00000050733) SDC3 (ENSCCRG00000042010) ENSCCRG00000050201 ENSCCRG00000081784 matn1 (ENSCCRG00000079213) sesn2 (ENSCCRG00000031091) yrk (ENSCCRG00000061987) AHDC1 (ENSCCRG00000062000) wasf2 (ENSCCRG00000071212) gpr3 (ENSCCRG00000077745) CD164L2 (ENSCCRG00000042396) si:ch211-199g17.9 (ENSCCRG00000050871) fam83hb (ENSCCRG00000050874) ENSCCRG00000024103 cap1 (ENSCCRG00000024091) ##22 ppt1 (ENSCCRG00000024020) ENSCCRG00000024006 ENSCCRG00000041266 ENSCCRG00000041301 ENSCCRG00000082450 rpl11 (ENSCCRG00000041254) ENSCCRG00000041241 eloa (ENSCCRG00000068552) lypla2 (ENSCCRG00000058275) ankib1a (ENSCCRG00000043360) ENSCCRG00000081238 lrrc14b (ENSCCRG00000043339) uqcrb (ENSCCRG00000076213) rad21b (ENSCCRG00000075006) CSMD3 (ENSCCRG00000043191) Golden-line barbel MODERN SPECIES 4416 cap1 (ENSSGRG00000002169) ##22 Goldfish MODERN SPECIES 38 snrnp40 (ENSCARG00000065518) nkain1 (ENSCARG00000065536) pum1 (ENSCARG00000065574) SDC3 (ENSCARG00000065809) ENSCARG00000065818 ENSCARG00000065824 matn1 (ENSCARG00000065836) sesn2 (ENSCARG00000018320) yrk (ENSCARG00000018346) AHDC1 (ENSCARG00000018410) wasf2 (ENSCARG00000018420) CD164L2 (ENSCARG00000018441) si:ch211-199g17.9 (ENSCARG00000018451) fam83hb (ENSCARG00000018473) KIAA0319L (ENSCARG00000018518) cap1 (ENSCARG00000019433) ##22 ppt1 (ENSCARG00000019499) ENSCARG00000019568 ENSCARG00000019582 ENSCARG00000019630 rpl11 (ENSCARG00000019634) ENSCARG00000019656 eloa (ENSCARG00000019670) pithd1 (ENSCARG00000019687) lypla2 (ENSCARG00000019704) ankib1a (ENSCARG00000019717) lrrc14b (ENSCARG00000019758) uqcrb (ENSCARG00000019768) ENSCARG00000019781 rad21b (ENSCARG00000019793) CSMD3 (ENSCARG00000019896) Zebrafish MODERN SPECIES 10 ENSDARG00000101785 matn1 (ENSDARG00000030215) sesn2 (ENSDARG00000070012) yrk (ENSDARG00000004378) AHDC1 (ENSDARG00000093453) ENSDARG00000100839 ENSDARG00000035657 wasf2 (ENSDARG00000024209) gpr3 (ENSDARG00000094860) CD164L2 (ENSDARG00000096327) ENSDARG00000092310 si:ch211-199g17.9 (ENSDARG00000076609) fam83hb (ENSDARG00000060830) si:ch211-193k19.2 (ENSDARG00000077572) ENSDARG00000035660 cap1 (ENSDARG00000016350) ##22 ppt1 (ENSDARG00000039980) ENSDARG00000086739 rpl11 (ENSDARG00000043509) ENSDARG00000053803 eloa (ENSDARG00000102365) pithd1 (ENSDARG00000098600) lypla2 (ENSDARG00000053656) ankib1a (ENSDARG00000060768) gatad1 (ENSDARG00000027612) ENSDARG00000069984 ENSDARG00000096299 nkd3 (ENSDARG00000086218) ENSDARG00000096278 ENSDARG00000013174 lrrc14b (ENSDARG00000060788) Euteleosteomorpha ANCESTRAL SPECIES 40 ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00980000199207 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741 ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000166582 ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000165766 ENSGT00940000155824.C.fc Acanthomorphata ANCESTRAL SPECIES 70 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Euacanthomorphacea ANCESTRAL SPECIES 24 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Tiger tail seahorse MODERN SPECIES 328 anxa14 (ENSHCOG00000003554) ENSHCOG00000003603 ENSHCOG00000003617 ENSHCOG00000003630 ENSHCOG00000003643 c19h1orf109 (ENSHCOG00000003649) cdca8 (ENSHCOG00000003685) ago4 (ENSHCOG00000003725) CLSPN (ENSHCOG00000003741) ENSHCOG00000003758 ENSHCOG00000003772 psmb2 (ENSHCOG00000003803) tfap2e (ENSHCOG00000003827) NCDN (ENSHCOG00000003839) KIAA0319L (ENSHCOG00000003961) cap1 (ENSHCOG00000003977) ##22 rragcb (ENSHCOG00000003986) ppt1 (ENSHCOG00000004004) fhl3b (ENSHCOG00000004026) meaf6 (ENSHCOG00000004069) ENSHCOG00000004092 thrap3b (ENSHCOG00000004098) eva1bb (ENSHCOG00000004121) oscp1a (ENSHCOG00000004224) zc3h12ab (ENSHCOG00000004255) smim13 (ENSHCOG00000004269) nedd9 (ENSHCOG00000004279) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Anabantaria ANCESTRAL SPECIES 16 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183031.A.a.a ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Anabantoidei ANCESTRAL SPECIES 19 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Climbing perch MODERN SPECIES 2 ENSATEG00000006981 ENSATEG00000006924 ENSATEG00000006846 ENSATEG00000006784 cdca8 (ENSATEG00000006762) ENSATEG00000027623 ENSATEG00000006755 ago4 (ENSATEG00000006717) CLSPN (ENSATEG00000006697) ENSATEG00000006685 ENSATEG00000006679 psmb2 (ENSATEG00000006643) TFAP2E (ENSATEG00000006627) NCDN (ENSATEG00000006619) KIAA0319L (ENSATEG00000006607) ENSATEG00000006592 ##22 ppt1 (ENSATEG00000028900) rragcb (ENSATEG00000006525) fhl3b (ENSATEG00000006513) meaf6 (ENSATEG00000006466) stpg1 (ENSATEG00000006457) map7d1b (ENSATEG00000006432) thrap3b (ENSATEG00000006350) eva1bb (ENSATEG00000006328) LSM10 (ENSATEG00000006310) oscp1a (ENSATEG00000006263) ENSATEG00000006247 zc3h12ab (ENSATEG00000006140) smim13 (ENSATEG00000006130) nedd9 (ENSATEG00000006076) TMEM170B (ENSATEG00000028130) Siamese fighting fish MODERN SPECIES 2 ENSBSLG00000019097 ENSBSLG00000019186 ENSBSLG00000019254 ENSBSLG00000019409 cdca8 (ENSBSLG00000019490) c19h1orf109 (ENSBSLG00000019504) ENSBSLG00000019513 ago4 (ENSBSLG00000019879) CLSPN (ENSBSLG00000020294) ENSBSLG00000020312 cdca5 (ENSBSLG00000020313) psmb2 (ENSBSLG00000020317) tfap2e (ENSBSLG00000020341) NCDN (ENSBSLG00000020347) KIAA0319L (ENSBSLG00000021191) cap1 (ENSBSLG00000021643) ##22 ppt1 (ENSBSLG00000021676) rragcb (ENSBSLG00000021829) fhl3b (ENSBSLG00000021855) meaf6 (ENSBSLG00000021881) stpg1 (ENSBSLG00000021909) map7d1b (ENSBSLG00000021935) thrap3b (ENSBSLG00000021994) eva1bb (ENSBSLG00000022015) LSM10 (ENSBSLG00000022026) oscp1a (ENSBSLG00000022029) ENSBSLG00000022042 ENSBSLG00000022051 smim13 (ENSBSLG00000022059) nedd9 (ENSBSLG00000022070) TMEM170B (ENSBSLG00000022084) Zig-zag eel MODERN SPECIES 2 ENSMAMG00000003666 ENSMAMG00000003681 ENSMAMG00000028145 ENSMAMG00000025438 cdca8 (ENSMAMG00000003792) ENSMAMG00000026857 ENSMAMG00000003839 ago4 (ENSMAMG00000003874) CLSPN (ENSMAMG00000003927) ENSMAMG00000003980 ENSMAMG00000003988 psmb2 (ENSMAMG00000003992) TFAP2E (ENSMAMG00000004022) NCDN (ENSMAMG00000004058) KIAA0319L (ENSMAMG00000004065) ENSMAMG00000004094 ##22 ppt1 (ENSMAMG00000004148) rragcb (ENSMAMG00000004171) fhl3b (ENSMAMG00000004199) meaf6 (ENSMAMG00000004214) stpg1 (ENSMAMG00000004237) map7d1b (ENSMAMG00000004292) thrap3b (ENSMAMG00000004348) eva1bb (ENSMAMG00000025345) ENSMAMG00000028468 oscp1a (ENSMAMG00000004443) ENSMAMG00000027271 ENSMAMG00000004529 zc3h12ab (ENSMAMG00000004483) smim13 (ENSMAMG00000028528) nedd9 (ENSMAMG00000004548) Carangaria ANCESTRAL SPECIES 14 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Pleuronectoidei ANCESTRAL SPECIES 33 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183031.A.a.a ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000177439 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Tongue sole MODERN SPECIES 9 ENSCSEG00000010775 ENSCSEG00000010768 ENSCSEG00000010762 ENSCSEG00000010755 cdca8 (ENSCSEG00000010742) c19h1orf109 (ENSCSEG00000010736) ENSCSEG00000010728 ago4 (ENSCSEG00000010696) CLSPN (ENSCSEG00000010681) ENSCSEG00000010661 cdca5 (ENSCSEG00000010655) psmb2 (ENSCSEG00000010643) tfap2e (ENSCSEG00000010632) NCDN (ENSCSEG00000010623) ENSCSEG00000010571 cap1 (ENSCSEG00000010543) ##22 ppt1 (ENSCSEG00000010527) rragcb (ENSCSEG00000010508) fhl3b (ENSCSEG00000010500) meaf6 (ENSCSEG00000010482) stpg1 (ENSCSEG00000010471) map7d1b (ENSCSEG00000010416) thrap3b (ENSCSEG00000010392) eva1bb (ENSCSEG00000010382) LSM10 (ENSCSEG00000010374) oscp1a (ENSCSEG00000010362) zc3h12ab (ENSCSEG00000010348) smim13 (ENSCSEG00000010342) nedd9 (ENSCSEG00000010325) TMEM170B (ENSCSEG00000010318) HIVEP1 (ENSCSEG00000010301) Turbot MODERN SPECIES 14 ENSSMAG00000020447 ENSSMAG00000015908 ENSSMAG00000020467 ENSSMAG00000020492 ENSSMAG00000020524 cdca8 (ENSSMAG00000020539) ENSSMAG00000000763 ENSSMAG00000000785 ago4 (ENSSMAG00000000808) CLSPN (ENSSMAG00000000941) ENSSMAG00000000955 ENSSMAG00000037330 TFAP2E (ENSSMAG00000000991) NCDN (ENSSMAG00000001017) KIAA0319L (ENSSMAG00000001024) ENSSMAG00000001063 ##22 ppt1 (ENSSMAG00000001080) rragcb (ENSSMAG00000001115) fhl3b (ENSSMAG00000001140) meaf6 (ENSSMAG00000001163) stpg1 (ENSSMAG00000035705) map7d1b (ENSSMAG00000001191) thrap3b (ENSSMAG00000001259) eva1bb (ENSSMAG00000001280) LSM10 (ENSSMAG00000001297) oscp1a (ENSSMAG00000001314) ENSSMAG00000021680 zc3h12ab (ENSSMAG00000001367) smim13 (ENSSMAG00000030110) nedd9 (ENSSMAG00000001395) TMEM170B (ENSSMAG00000030357) Carangaria_A ANCESTRAL SPECIES 16 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Seriola ANCESTRAL SPECIES 12 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00940000163648.b ENSGT00390000008551 ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b Greater amberjack MODERN SPECIES 48 anxa14 (ENSSDUG00000020553) ENSSDUG00000020585 ENSSDUG00000020610 ENSSDUG00000020625 ENSSDUG00000020675 cdca8 (ENSSDUG00000020732) C1orf109 (ENSSDUG00000020767) ago4 (ENSSDUG00000020781) CLSPN (ENSSDUG00000020843) ENSSDUG00000020869 ENSSDUG00000020874 psmb2 (ENSSDUG00000020882) tfap2e (ENSSDUG00000020894) NCDN (ENSSDUG00000020911) KIAA0319L (ENSSDUG00000020920) cap1 (ENSSDUG00000020949) ##22 ppt1 (ENSSDUG00000020980) rragcb (ENSSDUG00000021000) fhl3b (ENSSDUG00000021013) ENSSDUG00000021021 rnmt (ENSSDUG00000021026) HSF1 (ENSSDUG00000021039) bop1 (ENSSDUG00000021097) wdyhv1 (ENSSDUG00000021121) ENSSDUG00000000074 lrp12 (ENSSDUG00000000133) ENSSDUG00000000199 ENSSDUG00000000266 ENSSDUG00000000305 ENSSDUG00000000328 ENSSDUG00000000335 Yellowtail amberjack MODERN SPECIES 3177 ENSSLDG00000021973 ENSSLDG00000021938 ENSSLDG00000021902 cdca8 (ENSSLDG00000021883) ENSSLDG00000021878 c19h1orf109 (ENSSLDG00000021866) ago4 (ENSSLDG00000021841) ENSSLDG00000021829 CLSPN (ENSSLDG00000021723) ENSSLDG00000021715 ENSSLDG00000021707 psmb2 (ENSSLDG00000021694) tfap2e (ENSSLDG00000021682) NCDN (ENSSLDG00000021667) KIAA0319L (ENSSLDG00000021622) cap1 (ENSSLDG00000021580) ##22 ppt1 (ENSSLDG00000021546) rragcb (ENSSLDG00000021509) fhl3b (ENSSLDG00000021488) ENSSLDG00000021484 atf4a (ENSSLDG00000021470) ENSSLDG00000021461 ENSSLDG00000021455 ENSSLDG00000021426 ENSSLDG00000021410 MGAT3 (ENSSLDG00000021389) TAB1 (ENSSLDG00000021352) SYNGR1 (ENSSLDG00000021324) IFT27 (ENSSLDG00000021293) CACNG2 (ENSSLDG00000021282) CUTA (ENSSLDG00000021270) Barramundi perch MODERN SPECIES 293 anxa14 (ENSLCAG00010020080) ENSLCAG00010020090 ENSLCAG00010020106 ENSLCAG00010020146 ENSLCAG00010020254 cdca8 (ENSLCAG00010020263) c19h1orf109 (ENSLCAG00010020266) ENSLCAG00010020268 ago4 (ENSLCAG00010020527) ENSLCAG00010021604 ENSLCAG00010021608 psmb2 (ENSLCAG00010021613) tfap2e (ENSLCAG00010021638) NCDN (ENSLCAG00010021639) KIAA0319L (ENSLCAG00010021644) cap1 (ENSLCAG00010021655) ##22 ppt1 (ENSLCAG00010021693) rragcb (ENSLCAG00010021700) fhl3b (ENSLCAG00010021716) meaf6 (ENSLCAG00010021725) stpg1 (ENSLCAG00010021733) Eupercaria ANCESTRAL SPECIES 11 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Tetraodontidae ANCESTRAL SPECIES 43 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b.e ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a Tetraodon MODERN SPECIES 16 ENSTNIG00000017742 zgc:114119 (ENSTNIG00000017741) anxa14 (ENSTNIG00000017740) ENSTNIG00000017739 ENSTNIG00000017738 ENSTNIG00000017737 ENSTNIG00000017736 cdca8 (ENSTNIG00000001048) ENSTNIG00000006333 ENSTNIG00000006332 ago4 (ENSTNIG00000006331) CLSPN (ENSTNIG00000006330) ENSTNIG00000004591 NCDN (ENSTNIG00000004590) KIAA0319L (ENSTNIG00000004589) cap1 (ENSTNIG00000004588) ##22 ppt1 (ENSTNIG00000004587) rragcb (ENSTNIG00000004586) fhl3b (ENSTNIG00000004585) meaf6 (ENSTNIG00000004584) map7d1b (ENSTNIG00000004583) thrap3b (ENSTNIG00000004582) eva1bb (ENSTNIG00000004581) oscp1a (ENSTNIG00000019817) zc3h12ab (ENSTNIG00000001274) msto1 (ENSTNIG00000005572) srsf4 (ENSTNIG00000005573) xkr8.3 (ENSTNIG00000005574) eya3 (ENSTNIG00000000209) si:ch211-195b13.1 (ENSTNIG00000005575) ENSTNIG00000005576 Fugu MODERN SPECIES 3 ENSTRUG00000005618 ENSTRUG00000005759 ENSTRUG00000006367 ENSTRUG00000007751 cdca8 (ENSTRUG00000007782) C1orf109 (ENSTRUG00000024339) ENSTRUG00000007934 ago4 (ENSTRUG00000008052) CLSPN (ENSTRUG00000008616) ENSTRUG00000019824 cdca5 (ENSTRUG00000008868) psmb2 (ENSTRUG00000008871) tfap2e (ENSTRUG00000008956) NCDN (ENSTRUG00000009054) KIAA0319L (ENSTRUG00000009252) cap1 (ENSTRUG00000009345) ##22 ppt1 (ENSTRUG00000009602) rragcb (ENSTRUG00000009884) fhl3b (ENSTRUG00000010010) meaf6 (ENSTRUG00000010159) map7d1b (ENSTRUG00000010226) thrap3b (ENSTRUG00000010336) eva1bb (ENSTRUG00000010516) LSM10 (ENSTRUG00000010531) ENSTRUG00000025207 ENSTRUG00000010565 smim13 (ENSTRUG00000020110) smim13 (ENSTRUG00000025620) nedd9 (ENSTRUG00000010644) TMEM170B (ENSTRUG00000024077) HIVEP1 (ENSTRUG00000010871) Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 613 cdca8 (ENSLBEG00000010560) ENSLBEG00000010609 c19h1orf109 (ENSLBEG00000010631) ago4 (ENSLBEG00000010670) ENSLBEG00000010747 ENSLBEG00000010771 ENSLBEG00000010799 cdca5 (ENSLBEG00000010812) psmb2 (ENSLBEG00000010835) tfap2e (ENSLBEG00000010874) NCDN (ENSLBEG00000010924) KIAA0319L (ENSLBEG00000011002) cap1 (ENSLBEG00000011060) ##22 ENSLBEG00000011097 Ballan wrasse MODERN SPECIES 178 cap1 (ENSLBEG00000018203) ##22 ppt1 (ENSLBEG00000018087) rragcb (ENSLBEG00000018067) fhl3b (ENSLBEG00000018044) meaf6 (ENSLBEG00000018002) stpg1 (ENSLBEG00000017959) map7d1b (ENSLBEG00000017860) thrap3b (ENSLBEG00000017803) eva1bb (ENSLBEG00000017790) LSM10 (ENSLBEG00000017764) ENSLBEG00000017744 oscp1a (ENSLBEG00000017707) ENSLBEG00000017687 ENSLBEG00000017654 zc3h12ab (ENSLBEG00000017593) smim13 (ENSLBEG00000017560) Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Perciformes ANCESTRAL SPECIES 11 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D Stickleback MODERN SPECIES 9 ENSGACG00000002719 ENSGACG00000002716 ENSGACG00000002703 ENSGACG00000002696 cdca8 (ENSGACG00000002694) c19h1orf109 (ENSGACG00000002689) ENSGACG00000002688 ago4 (ENSGACG00000002683) ENSGACG00000002679 ENSGACG00000002678 cdca5 (ENSGACG00000002675) psmb2 (ENSGACG00000002674) tfap2e (ENSGACG00000002672) NCDN (ENSGACG00000002669) KIAA0319L (ENSGACG00000002660) cap1 (ENSGACG00000002653) ##22 ppt1 (ENSGACG00000002641) rragcb (ENSGACG00000002629) fhl3b (ENSGACG00000002619) meaf6 (ENSGACG00000002615) map7d1b (ENSGACG00000002607) pkhd1l1.2 (ENSGACG00000002583) nudcd1 (ENSGACG00000002575) trhrb (ENSGACG00000002573) pleca (ENSGACG00000002566) ENSGACG00000002563 ENSGACG00000002562 slc52a2 (ENSGACG00000002556) ENSGACG00000002548 nfatc1 (ENSGACG00000002545) atp9b (ENSGACG00000002539) Lumpfish MODERN SPECIES 2 ENSCLMG00005022798 ENSCLMG00005022795 ENSCLMG00005022739 ENSCLMG00005022732 cdca8 (ENSCLMG00005022730) c19h1orf109 (ENSCLMG00005022729) ENSCLMG00005022728 ago4 (ENSCLMG00005022462) CLSPN (ENSCLMG00005022434) ENSCLMG00005022430 cdca5 (ENSCLMG00005022429) psmb2 (ENSCLMG00005022422) tfap2e (ENSCLMG00005022419) NCDN (ENSCLMG00005022416) KIAA0319L (ENSCLMG00005022250) cap1 (ENSCLMG00005022185) ##22 ppt1 (ENSCLMG00005022130) rragcb (ENSCLMG00005022126) fhl3b (ENSCLMG00005022125) meaf6 (ENSCLMG00005022124) stpg1 (ENSCLMG00005022122) map7d1b (ENSCLMG00005022121) thrap3b (ENSCLMG00005022119) eva1bb (ENSCLMG00005022118) LSM10 (ENSCLMG00005022117) oscp1a (ENSCLMG00005022114) zc3h12ab (ENSCLMG00005022113) smim13 (ENSCLMG00005022112) nedd9 (ENSCLMG00005022110) TMEM170B (ENSCLMG00005022109) HIVEP1 (ENSCLMG00005022108) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183031.A.a.a ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Pike perch MODERN SPECIES 13 ENSSLUG00000011593 ENSSLUG00000011490 ENSSLUG00000011385 ENSSLUG00000011365 cdca8 (ENSSLUG00000011358) c19h1orf109 (ENSSLUG00000011355) ENSSLUG00000011352 ago4 (ENSSLUG00000006092) CLSPN (ENSSLUG00000005829) ENSSLUG00000005827 cdca5 (ENSSLUG00000005818) psmb2 (ENSSLUG00000005805) tfap2e (ENSSLUG00000005788) NCDN (ENSSLUG00000005782) KIAA0319L (ENSSLUG00000004935) cap1 (ENSSLUG00000004853) ##22 ppt1 (ENSSLUG00000004585) rragcb (ENSSLUG00000004552) fhl3b (ENSSLUG00000004540) meaf6 (ENSSLUG00000004526) stpg1 (ENSSLUG00000004518) map7d1b (ENSSLUG00000004454) thrap3b (ENSSLUG00000004422) eva1bb (ENSSLUG00000004412) LSM10 (ENSSLUG00000004403) oscp1a (ENSSLUG00000004327) ENSSLUG00000004314 ENSSLUG00000004309 ENSSLUG00000004301 zc3h12ab (ENSSLUG00000004297) smim13 (ENSSLUG00000004292) Channel bull blenny MODERN SPECIES 2 ENSCGOG00000003788 ENSCGOG00000003806 ENSCGOG00000003939 ENSCGOG00000005598 cdca8 (ENSCGOG00000005605) c19h1orf109 (ENSCGOG00000005606) ENSCGOG00000005608 ago4 (ENSCGOG00000005647) CLSPN (ENSCGOG00000008234) ENSCGOG00000008245 cdca5 (ENSCGOG00000008246) psmb2 (ENSCGOG00000008253) tfap2e (ENSCGOG00000008293) NCDN (ENSCGOG00000008308) KIAA0319L (ENSCGOG00000008351) cap1 (ENSCGOG00000009184) ##22 ppt1 (ENSCGOG00000009478) rragcb (ENSCGOG00000009623) fhl3b (ENSCGOG00000009706) meaf6 (ENSCGOG00000009716) stpg1 (ENSCGOG00000009789) map7d1b (ENSCGOG00000009797) thrap3b (ENSCGOG00000009838) eva1bb (ENSCGOG00000009852) LSM10 (ENSCGOG00000009858) oscp1a (ENSCGOG00000009863) ENSCGOG00000009889 zc3h12ab (ENSCGOG00000009896) smim13 (ENSCGOG00000009899) nedd9 (ENSCGOG00000009901) TMEM170B (ENSCGOG00000009902) Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Gilthead seabream MODERN SPECIES 17 ENSSAUG00010012520 ENSSAUG00010010463 ENSSAUG00010010436 ENSSAUG00010010433 cdca8 (ENSSAUG00010010431) ENSSAUG00010010430 c19h1orf109 (ENSSAUG00010010428) ago4 (ENSSAUG00010008440) CLSPN (ENSSAUG00010008404) ENSSAUG00010008403 cdca5 (ENSSAUG00010008401) psmb2 (ENSSAUG00010008400) tfap2e (ENSSAUG00010008399) NCDN (ENSSAUG00010008396) KIAA0319L (ENSSAUG00010005044) cap1 (ENSSAUG00010004535) ##22 rragcb (ENSSAUG00010004527) fhl3b (ENSSAUG00010004524) ppt1 (ENSSAUG00010004438) stpg1 (ENSSAUG00010004417) map7d1b (ENSSAUG00010004404) thrap3b (ENSSAUG00010004395) eva1bb (ENSSAUG00010004385) LSM10 (ENSSAUG00010004379) ENSSAUG00010004375 oscp1a (ENSSAUG00010004367) zc3h12ab (ENSSAUG00010004363) smim13 (ENSSAUG00010004360) nedd9 (ENSSAUG00010004355) TMEM170B (ENSSAUG00010004349) HIVEP1 (ENSSAUG00010004340) Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00390000010887.b ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183031.A.a.a ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 Large yellow croaker MODERN SPECIES 484 ENSLCRG00005010007 ENSLCRG00005009078 ENSLCRG00005009065 cdca8 (ENSLCRG00005009055) c19h1orf109 (ENSLCRG00005009052) ENSLCRG00005009051 ago4 (ENSLCRG00005004900) CLSPN (ENSLCRG00005004867) ENSLCRG00005004866 cdca5 (ENSLCRG00005004865) psmb2 (ENSLCRG00005004853) tfap2e (ENSLCRG00005004851) NCDN (ENSLCRG00005004849) ENSLCRG00005004848 KIAA0319L (ENSLCRG00005002018) cap1 (ENSLCRG00005001693) ##22 ppt1 (ENSLCRG00005000758) rragcb (ENSLCRG00005000695) fhl3b (ENSLCRG00005000684) meaf6 (ENSLCRG00005000657) stpg1 (ENSLCRG00005000640) map7d1b (ENSLCRG00005020478) thrap3b (ENSLCRG00005020473) eva1bb (ENSLCRG00005020472) LSM10 (ENSLCRG00005020471) oscp1a (ENSLCRG00005020381) ENSLCRG00005020362 zc3h12ab (ENSLCRG00005020357) smim13 (ENSLCRG00005020351) nedd9 (ENSLCRG00005020348) pip5k1aa (ENSLCRG00005020307) European seabass MODERN SPECIES 22 ENSDLAG00005030748 anxa14 (ENSDLAG00005013235) ENSDLAG00005013254 ENSDLAG00005013377 ENSDLAG00005033397 ENSDLAG00005013419 ENSDLAG00005030850 ENSDLAG00005013457 AGO4 (ENSDLAG00005013573) CLSPN (ENSDLAG00005016583) beta 2 (ENSDLAG00005034806) ENSDLAG00005016605 tfap2e (ENSDLAG00005016618) NCDN (ENSDLAG00005016625) KIAA0319L (ENSDLAG00005016664) ENSDLAG00005017641 ##22 ppt1 (ENSDLAG00005032737) rragcb (ENSDLAG00005018704) fhl3b (ENSDLAG00005018713) meaf6 (ENSDLAG00005018732) stpg1 (ENSDLAG00005026697) map7d1b (ENSDLAG00005018751) thrap3b (ENSDLAG00005018774) eva1bb (ENSDLAG00005002280) LSM10 (ENSDLAG00005002297) oscp1a (ENSDLAG00005002331) ENSDLAG00005035131 zc3h12ab (ENSDLAG00005002900) smim13 (ENSDLAG00005002917) nedd9 (ENSDLAG00005002936) TMEM170B (ENSDLAG00005030210) Ovalentaria ANCESTRAL SPECIES 12 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Atherinomorphae ANCESTRAL SPECIES 52 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000177439 ENSGT00940000155107.a.a.b ENSGT00560000078630 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f Aplocheiloidei ANCESTRAL SPECIES 129 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f Mangrove rivulus MODERN SPECIES 462 cetn3 (ENSKMAG00000018437) ENSKMAG00000018500 ENSKMAG00000018526 cdca8 (ENSKMAG00000018541) c19h1orf109 (ENSKMAG00000018559) ENSKMAG00000018569 ago4 (ENSKMAG00000018602) CLSPN (ENSKMAG00000018666) ENSKMAG00000018682 cdca5 (ENSKMAG00000018685) psmb2 (ENSKMAG00000018698) tfap2e (ENSKMAG00000018717) NCDN (ENSKMAG00000018744) KIAA0319L (ENSKMAG00000018761) cap1 (ENSKMAG00000018793) ##22 ppt1 (ENSKMAG00000018850) rragcb (ENSKMAG00000018876) Turquoise killifish MODERN SPECIES 411 cap1 (ENSNFUG00015020221) ##22 ppt1 (ENSNFUG00015020397) ENSNFUG00015020420 MEAF6 (ENSNFUG00015020423) map7d1b (ENSNFUG00015020435) thrap3b (ENSNFUG00015020457) Cyprinodontoidei ANCESTRAL SPECIES 60 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B NAME_4 ANCESTRAL SPECIES 178 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729.n ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00940000164496.a.a ENSGT00950000182978.B Sheepshead minnow MODERN SPECIES 583 ENSCVAG00000016702 ENSCVAG00000016746 ENSCVAG00000016831 anxa14 (ENSCVAG00000016854) zgc:114119 (ENSCVAG00000016993) ENSCVAG00000017317 ago4 (ENSCVAG00000017336) ENSCVAG00000017357 CLSPN (ENSCVAG00000017371) ENSCVAG00000017379 ENSCVAG00000017396 psmb2 (ENSCVAG00000017416) tfap2e (ENSCVAG00000017461) NCDN (ENSCVAG00000017472) ENSCVAG00000017529 cap1 (ENSCVAG00000017565) ##22 ppt1 (ENSCVAG00000017599) rragcb (ENSCVAG00000017608) fhl3b (ENSCVAG00000017614) meaf6 (ENSCVAG00000017635) Mummichog MODERN SPECIES 474 ENSFHEG00000019848 ENSFHEG00000019777 anxa14 (ENSFHEG00000019769) zgc:114119 (ENSFHEG00000019760) ENSFHEG00000019733 ENSFHEG00000019678 ago4 (ENSFHEG00000019658) CLSPN (ENSFHEG00000019597) ENSFHEG00000019393 cdca5 (ENSFHEG00000019385) psmb2 (ENSFHEG00000019370) tfap2e (ENSFHEG00000000768) ENSFHEG00000019323 ENSFHEG00000019302 ENSFHEG00000019289 cap1 (ENSFHEG00000019243) ##22 ppt1 (ENSFHEG00000019205) ENSFHEG00000019180 fhl3b (ENSFHEG00000019162) Poeciliinae ANCESTRAL SPECIES 24 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e Poecilia ANCESTRAL SPECIES 73 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000170176 ENSGT00950000182978.B ENSGT00940000164496.a.a ENSGT00560000078630 ENSGT01090000260093.b.f.o ENSGT01090000260093.b.e NAME_6 ANCESTRAL SPECIES 199 ENSGT00940000164552 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000166692 ENSGT00390000010887.b ENSGT00940000163960.a ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000170176 ENSGT00950000182978.B ENSGT00940000164496.a.a Sailfin molly MODERN SPECIES 1230 ENSPLAG00000011474 ago4 (ENSPLAG00000011534) CLSPN (ENSPLAG00000011602) ENSPLAG00000011614 cdca5 (ENSPLAG00000011624) psmb2 (ENSPLAG00000011645) tfap2e (ENSPLAG00000011663) NCDN (ENSPLAG00000011672) KIAA0319L (ENSPLAG00000011744) cap1 (ENSPLAG00000011756) ##22 ppt1 (ENSPLAG00000011779) rragcb (ENSPLAG00000011802) Amazon molly MODERN SPECIES 658 ENSPFOG00000003513 ENSPFOG00000003221 ENSPFOG00000003103 ENSPFOG00000002936 anxa14 (ENSPFOG00000002795) zgc:114119 (ENSPFOG00000002726) ENSPFOG00000002334 ago4 (ENSPFOG00000001935) CLSPN (ENSPFOG00000001788) ENSPFOG00000024371 cdca5 (ENSPFOG00000001777) psmb2 (ENSPFOG00000001718) tfap2e (ENSPFOG00000001600) NCDN (ENSPFOG00000001489) KIAA0319L (ENSPFOG00000001224) cap1 (ENSPFOG00000001012) ##22 ppt1 (ENSPFOG00000000883) rragcb (ENSPFOG00000000814) fhl3b (ENSPFOG00000000748) meaf6 (ENSPFOG00000000680) map7d1b (ENSPFOG00000000581) thrap3b (ENSPFOG00000000525) eva1bb (ENSPFOG00000000508) LSM10 (ENSPFOG00000020490) oscp1a (ENSPFOG00000000446) ENSPFOG00000020489 ENSPFOG00000000423 eya3 (ENSPFOG00000000356) si:ch211-195b13.1 (ENSPFOG00000000288) Guppy MODERN SPECIES 441 ENSPREG00000011369 ENSPREG00000011327 ENSPREG00000011300 ENSPREG00000010494 ENSPREG00000010404 ENSPREG00000010398 ENSPREG00000010386 ago4 (ENSPREG00000010315) CLSPN (ENSPREG00000010244) ENSPREG00000010216 cdca5 (ENSPREG00000010215) psmb2 (ENSPREG00000010199) tfap2e (ENSPREG00000010182) NCDN (ENSPREG00000010167) KIAA0319L (ENSPREG00000010131) cap1 (ENSPREG00000010113) ##22 ppt1 (ENSPREG00000010053) rragcb (ENSPREG00000010016) fhl3b (ENSPREG00000010000) meaf6 (ENSPREG00000009968) thrap3b (ENSPREG00000009927) ENSPREG00000009908 LSM10 (ENSPREG00000009899) oscp1a (ENSPREG00000009882) ENSPREG00000009875 ENSPREG00000009866 eya3 (ENSPREG00000009854) smim13 (ENSPREG00000009828) ENSPREG00000009817 XKR8 (ENSPREG00000009810) si:ch211-195b13.1 (ENSPREG00000009750) Platyfish MODERN SPECIES 4 ENSXMAG00000016771 ENSXMAG00000016765 ENSXMAG00000016751 anxa14 (ENSXMAG00000016728) zgc:114119 (ENSXMAG00000024303) ENSXMAG00000016688 ENSXMAG00000027954 ago4 (ENSXMAG00000016657) CLSPN (ENSXMAG00000016634) ENSXMAG00000021351 cdca5 (ENSXMAG00000022429) psmb2 (ENSXMAG00000016616) tfap2e (ENSXMAG00000003446) NCDN (ENSXMAG00000027698) KIAA0319L (ENSXMAG00000003454) cap1 (ENSXMAG00000028529) ##22 ppt1 (ENSXMAG00000003488) rragcb (ENSXMAG00000013223) fhl3b (ENSXMAG00000003516) meaf6 (ENSXMAG00000003525) map7d1b (ENSXMAG00000003534) thrap3b (ENSXMAG00000017962) eva1bb (ENSXMAG00000017970) LSM10 (ENSXMAG00000019963) ENSXMAG00000004775 ENSXMAG00000028561 ENSXMAG00000028082 ENSXMAG00000017971 eya3 (ENSXMAG00000017972) si:ch211-195b13.1 (ENSXMAG00000017993) smim13 (ENSXMAG00000019893) Oryzias ANCESTRAL SPECIES 23 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000177439.a ENSGT00940000177439.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.q.b ENSGT00940000156213.q.a Oryzias_b ANCESTRAL SPECIES 27 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183031.A.a.a ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000177439.a ENSGT00940000177439.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.r Indian medaka MODERN SPECIES 3 ENSOMEG00000006604 ENSOMEG00000006585 ENSOMEG00000006525 cdca8 (ENSOMEG00000006469) c19h1orf109 (ENSOMEG00000006433) ENSOMEG00000006427 ago4 (ENSOMEG00000006399) CLSPN (ENSOMEG00000006343) ENSOMEG00000006270 cdca5 (ENSOMEG00000006255) psmb2 (ENSOMEG00000006246) ENSOMEG00000006212 tfap2e (ENSOMEG00000000143) NCDN (ENSOMEG00000006095) KIAA0319L (ENSOMEG00000006068) cap1 (ENSOMEG00000006049) ##22 ppt1 (ENSOMEG00000006005) rragcb (ENSOMEG00000000957) fhl3b (ENSOMEG00000005944) meaf6 (ENSOMEG00000005907) map7d1b (ENSOMEG00000005865) thrap3b (ENSOMEG00000005716) eva1bb (ENSOMEG00000005691) ENSOMEG00000005680 oscp1a (ENSOMEG00000005663) ENSOMEG00000005633 ENSOMEG00000005619 ENSOMEG00000005607 zc3h12ab (ENSOMEG00000005602) smim13 (ENSOMEG00000000693) msto1 (ENSOMEG00000005580) Javanese ricefish MODERN SPECIES 2 tpmt.1 (ENSOJAG00000014399) #26 ENSOJAG00000014422 zgc:114119 (ENSOJAG00000014449) anxa14 (ENSOJAG00000014460) ENSOJAG00000014477 ENSOJAG00000014949 ENSOJAG00000015107 cdca8 (ENSOJAG00000015123) c19h1orf109 (ENSOJAG00000015238) ENSOJAG00000015245 EIF2C4 (ENSOJAG00000015300) ENSOJAG00000017111 psmb2 (ENSOJAG00000017149) tfap2e (ENSOJAG00000017207) KIAA0319L (ENSOJAG00000017300) cap1 (ENSOJAG00000018135) ##22 ENSOJAG00000018375 rragcb (ENSOJAG00000018406) fhl3b (ENSOJAG00000018420) meaf6 (ENSOJAG00000018430) map7d1b (ENSOJAG00000018478) thrap3b (ENSOJAG00000018559) eva1bb (ENSOJAG00000018573) LSM10 (ENSOJAG00000018606) oscp1a (ENSOJAG00000018623) ENSOJAG00000001622 ENSOJAG00000001634 zc3h12ab (ENSOJAG00000001643) smim13 (ENSOJAG00000001654) msto1 (ENSOJAG00000001662) srsf4 (ENSOJAG00000001676) Oryzias_a ANCESTRAL SPECIES 18 ENSGT00530000063426.b.a ENSGT00940000154798.b ENSGT00940000157740 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000177439.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00530000064067 ENSGT00940000156213.q.b ENSGT00940000156213.q.a Chinese medaka MODERN SPECIES 659 cdca8 (ENSOSIG00000022775) ENSOSIG00000022770 c19h1orf109 (ENSOSIG00000022768) ago4 (ENSOSIG00000022728) ENSOSIG00000022714 ENSOSIG00000022710 ENSOSIG00000022708 psmb2 (ENSOSIG00000022707) tfap2e (ENSOSIG00000022704) NCDN (ENSOSIG00000022696) KIAA0319L (ENSOSIG00000022341) cap1 (ENSOSIG00000022267) ##22 ppt1 (ENSOSIG00000021993) rragcb (ENSOSIG00000021848) fhl3b (ENSOSIG00000021818) meaf6 (ENSOSIG00000021815) ENSOSIG00000021805 thrap3b (ENSOSIG00000021772) eva1bb (ENSOSIG00000021751) LSM10 (ENSOSIG00000021747) oscp1a (ENSOSIG00000021743) ENSOSIG00000021733 ENSOSIG00000021725 ENSOSIG00000021721 zc3h12ab (ENSOSIG00000021718) smim13 (ENSOSIG00000021709) msto1 (ENSOSIG00000021707) Japanese Medaka HdrR MODERN SPECIES 2 ENSORLG00000010069 ENSORLG00000010009 ENSORLG00000029443 ENSORLG00000009982 cdca8 (ENSORLG00000009938) c19h1orf109 (ENSORLG00000009883) ENSORLG00000009875 ago4 (ENSORLG00000009865) CLSPN (ENSORLG00000009781) ENSORLG00000027383 cdca5 (ENSORLG00000009754) psmb2 (ENSORLG00000009748) tfap2e (ENSORLG00000022744) NCDN (ENSORLG00000009735) KIAA0319L (ENSORLG00000009728) cap1 (ENSORLG00000009709) ##22 ppt1 (ENSORLG00000009676) rragcb (ENSORLG00000009645) meaf6 (ENSORLG00000021858) map7d1b (ENSORLG00000009561) thrap3b (ENSORLG00000009543) eva1bb (ENSORLG00000009511) LSM10 (ENSORLG00000009504) ENSORLG00000028326 oscp1a (ENSORLG00000009500) ENSORLG00000028537 ENSORLG00000027497 ENSORLG00000009473 smim13 (ENSORLG00000023911) msto1 (ENSORLG00000009462) ENSORLG00000009430 Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Pomacentridae ANCESTRAL SPECIES 95 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729.o ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536.u ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Pomacentridae_A ANCESTRAL SPECIES 132 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729.o ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536.u ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b.c ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D Amphiprion ANCESTRAL SPECIES 158 ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729.o ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536.u ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT01000000216251 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b.c ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364.f ENSGT00510000048364.e ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Clown anemonefish MODERN SPECIES 1147 ENSAOCG00000017233 ENSAOCG00000017213 cap1 (ENSAOCG00000001864) ##22 ppt1 (ENSAOCG00000017148) rragcb (ENSAOCG00000017111) fhl3b (ENSAOCG00000017086) Orange clownfish MODERN SPECIES 8 ENSAPEG00000022569 cdca8 (ENSAPEG00000022523) c19h1orf109 (ENSAPEG00000022514) ENSAPEG00000022494 ago4 (ENSAPEG00000022426) ENSAPEG00000022417 CLSPN (ENSAPEG00000022309) ENSAPEG00000022289 cdca5 (ENSAPEG00000022283) psmb2 (ENSAPEG00000022265) tfap2e (ENSAPEG00000022240) NCDN (ENSAPEG00000022220) ENSAPEG00000022212 ENSAPEG00000022202 KIAA0319L (ENSAPEG00000022186) cap1 (ENSAPEG00000022140) ##22 ppt1 (ENSAPEG00000022102) rragcb (ENSAPEG00000022074) ENSAPEG00000022058 fhl3b (ENSAPEG00000022036) meaf6 (ENSAPEG00000022021) stpg1 (ENSAPEG00000021982) ENSAPEG00000021910 eva1bb (ENSAPEG00000021900) ENSAPEG00000021890 thrap3b (ENSAPEG00000021862) LSM10 (ENSAPEG00000021851) LSM10 (ENSAPEG00000021845) oscp1a (ENSAPEG00000021818) ENSAPEG00000021810 zc3h12ab (ENSAPEG00000021795) Spiny chromis MODERN SPECIES 2792 ENSAPOG00000010661 cap1 (ENSAPOG00000010608) ##22 ENSAPOG00000010562 Bicolor damselfish MODERN SPECIES 2477 ENSSPAG00000012314 cap1 (ENSSPAG00000012271) ##22 Cichlidae ANCESTRAL SPECIES 7 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 Nile tilapia MODERN SPECIES 13 ENSONIG00000013581 ENSONIG00000013583 ENSONIG00000013586 ENSONIG00000013593 cdca8 (ENSONIG00000032157) c19h1orf109 (ENSONIG00000041795) ENSONIG00000020903 ago4 (ENSONIG00000013603) CLSPN (ENSONIG00000013618) ENSONIG00000032443 cdca5 (ENSONIG00000013627) psmb2 (ENSONIG00000013628) tfap2e (ENSONIG00000013632) NCDN (ENSONIG00000013638) KIAA0319L (ENSONIG00000013646) cap1 (ENSONIG00000013650) ##22 ppt1 (ENSONIG00000013654) rragcb (ENSONIG00000013658) fhl3b (ENSONIG00000016304) meaf6 (ENSONIG00000013665) stpg1 (ENSONIG00000013668) map7d1b (ENSONIG00000013670) thrap3b (ENSONIG00000013673) eva1bb (ENSONIG00000013681) LSM10 (ENSONIG00000020904) oscp1a (ENSONIG00000013682) ENSONIG00000032030 ENSONIG00000039124 ENSONIG00000013684 ENSONIG00000028012 ENSONIG00000032847 Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 Haplochromini ANCESTRAL SPECIES 5 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00940000156539.z ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 Burton s mouthbrooder MODERN SPECIES 524 ENSHBUG00000001475 ENSHBUG00000001483 ENSHBUG00000001492 ENSHBUG00000001497 cdca8 (ENSHBUG00000001503) ENSHBUG00000001506 c19h1orf109 (ENSHBUG00000001509) ago4 (ENSHBUG00000001525) CLSPN (ENSHBUG00000001542) ENSHBUG00000001554 cdca5 (ENSHBUG00000001559) psmb2 (ENSHBUG00000001568) tfap2e (ENSHBUG00000001580) NCDN (ENSHBUG00000001587) KIAA0319L (ENSHBUG00000001599) cap1 (ENSHBUG00000001615) ##22 ppt1 (ENSHBUG00000001625) rragcb (ENSHBUG00000001632) fhl3b (ENSHBUG00000001636) meaf6 (ENSHBUG00000001648) stpg1 (ENSHBUG00000001653) map7d1b (ENSHBUG00000001680) thrap3b (ENSHBUG00000001708) eva1bb (ENSHBUG00000001719) LSM10 (ENSHBUG00000001722) oscp1a (ENSHBUG00000001728) ENSHBUG00000001735 ENSHBUG00000001743 Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00940000156539.z ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00940000156539.z ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00940000169005 ENSGT00390000010028 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT01090000260364.b.b.a ENSGT00390000010118.c.a.b.i.a ENSGT01060000249788.a ENSGT01070000254348.a ENSGT01070000254348.b Zebra mbuna MODERN SPECIES 1104 ENSMZEG00005026355 ENSMZEG00005026353 ENSMZEG00005026352 ENSMZEG00005026351 cdca8 (ENSMZEG00005026349) c19h1orf109 (ENSMZEG00005026348) ENSMZEG00005026347 ago4 (ENSMZEG00005026346) CLSPN (ENSMZEG00005026344) ENSMZEG00005026343 ENSMZEG00005026340 psmb2 (ENSMZEG00005026338) tfap2e (ENSMZEG00005026336) NCDN (ENSMZEG00005026335) KIAA0319L (ENSMZEG00005026332) cap1 (ENSMZEG00005026329) ##22 ppt1 (ENSMZEG00005026327) rragcb (ENSMZEG00005026324) fhl3b (ENSMZEG00005026323) meaf6 (ENSMZEG00005026320) stpg1 (ENSMZEG00005026316) map7d1b (ENSMZEG00005026312) thrap3b (ENSMZEG00005026309) eva1bb (ENSMZEG00005026308) LSM10 (ENSMZEG00005026307) oscp1a (ENSMZEG00005026304) ENSMZEG00005026303 ENSMZEG00005026301 ENSMZEG00005026299 ENSMZEG00005026298 ENSMZEG00005026296 Eastern happy MODERN SPECIES 13 ENSACLG00000005414 ENSACLG00000005401 ENSACLG00000005365 ENSACLG00000005350 cdca8 (ENSACLG00000005321) c19h1orf109 (ENSACLG00000005310) ENSACLG00000005287 ago4 (ENSACLG00000005181) CLSPN (ENSACLG00000005132) ENSACLG00000005127 ENSACLG00000005115 psmb2 (ENSACLG00000005086) tfap2e (ENSACLG00000005058) NCDN (ENSACLG00000005026) KIAA0319L (ENSACLG00000004999) cap1 (ENSACLG00000004977) ##22 ppt1 (ENSACLG00000004957) rragcb (ENSACLG00000004938) fhl3b (ENSACLG00000004926) meaf6 (ENSACLG00000004907) stpg1 (ENSACLG00000004902) map7d1b (ENSACLG00000004864) thrap3b (ENSACLG00000004763) eva1bb (ENSACLG00000004750) LSM10 (ENSACLG00000004728) oscp1a (ENSACLG00000004687) ENSACLG00000004680 ENSACLG00000004674 ENSACLG00000004658 ENSACLG00000004641 ENSACLG00000004617 P. nyererei MODERN SPECIES 388 ENSPNYG00000001909 cdca8 (ENSPNYG00000001940) c19h1orf109 (ENSPNYG00000002036) ENSPNYG00000002046 ago4 (ENSPNYG00000002089) CLSPN (ENSPNYG00000002159) ENSPNYG00000002405 cdca5 (ENSPNYG00000002457) psmb2 (ENSPNYG00000002470) tfap2e (ENSPNYG00000002494) NCDN (ENSPNYG00000002533) KIAA0319L (ENSPNYG00000002650) cap1 (ENSPNYG00000002687) ##22 ppt1 (ENSPNYG00000002732) rragcb (ENSPNYG00000002775) fhl3b (ENSPNYG00000002809) meaf6 (ENSPNYG00000002859) stpg1 (ENSPNYG00000002988) map7d1b (ENSPNYG00000003016) thrap3b (ENSPNYG00000003062) eva1bb (ENSPNYG00000003106) LSM10 (ENSPNYG00000003138) oscp1a (ENSPNYG00000003173) ENSPNYG00000003238 ENSPNYG00000003253 ENSPNYG00000003267 ENSPNYG00000003289 zc3h12ab (ENSPNYG00000003297) Lyretail cichlid MODERN SPECIES 322 ENSNBRG00000013340 ENSNBRG00000013358 ENSNBRG00000013384 ENSNBRG00000013388 cdca8 (ENSNBRG00000013397) c19h1orf109 (ENSNBRG00000013460) ENSNBRG00000013473 ago4 (ENSNBRG00000013492) CLSPN (ENSNBRG00000013539) ENSNBRG00000013713 ENSNBRG00000013760 psmb2 (ENSNBRG00000013797) tfap2e (ENSNBRG00000013819) ENSNBRG00000013858 ENSNBRG00000013921 cap1 (ENSNBRG00000013979) ##22 ppt1 (ENSNBRG00000014017) rragcb (ENSNBRG00000014036) fhl3b (ENSNBRG00000014055) meaf6 (ENSNBRG00000014080) stpg1 (ENSNBRG00000014134) map7d1b (ENSNBRG00000014183) thrap3b (ENSNBRG00000014237) eva1bb (ENSNBRG00000014294) LSM10 (ENSNBRG00000014306) oscp1a (ENSNBRG00000014319) ENSNBRG00000014359 zc3h12ab (ENSNBRG00000014376) smim13 (ENSNBRG00000014425) nedd9 (ENSNBRG00000014432) ENSNBRG00000014486 Midas cichlid MODERN SPECIES 1145 ENSACIG00000014426 ENSACIG00000014456 ENSACIG00000014482 cdca8 (ENSACIG00000014512) c19h1orf109 (ENSACIG00000014525) ENSACIG00000014536 ago4 (ENSACIG00000014548) ENSACIG00000014590 CLSPN (ENSACIG00000014619) ENSACIG00000014975 cdca5 (ENSACIG00000014987) psmb2 (ENSACIG00000014995) tfap2e (ENSACIG00000015015) ENSACIG00000015036 KIAA0319L (ENSACIG00000015054) cap1 (ENSACIG00000015108) ##22 ppt1 (ENSACIG00000015133) rragcb (ENSACIG00000015168) fhl3b (ENSACIG00000015186) meaf6 (ENSACIG00000015202) stpg1 (ENSACIG00000015255) map7d1b (ENSACIG00000015299) thrap3b (ENSACIG00000015331) eva1bb (ENSACIG00000015385) LSM10 (ENSACIG00000015420) oscp1a (ENSACIG00000015426) ENSACIG00000015456 ENSACIG00000015467 ENSACIG00000015475 Pinecone sodierfish MODERN SPECIES 2 ENSMMDG00005021963 ENSMMDG00005021959 ENSMMDG00005021954 ENSMMDG00005021946 cdca8 (ENSMMDG00005021943) c19h1orf109 (ENSMMDG00005021940) ENSMMDG00005021937 ago4 (ENSMMDG00005021010) CLSPN (ENSMMDG00005020985) ENSMMDG00005020984 cdca5 (ENSMMDG00005020983) psmb2 (ENSMMDG00005020981) tfap2e (ENSMMDG00005020979) NCDN (ENSMMDG00005020974) KIAA0319L (ENSMMDG00005019489) cap1 (ENSMMDG00005019452) ##22 ppt1 (ENSMMDG00005019225) rragcb (ENSMMDG00005019217) fhl3b (ENSMMDG00005019214) meaf6 (ENSMMDG00005019209) stpg1 (ENSMMDG00005019205) map7d1b (ENSMMDG00005019203) thrap3b (ENSMMDG00005019200) eva1bb (ENSMMDG00005019196) LSM10 (ENSMMDG00005019195) oscp1a (ENSMMDG00005019191) ENSMMDG00005019189 ENSMMDG00005019186 ENSMMDG00005019184 zc3h12ab (ENSMMDG00005019182) smim13 (ENSMMDG00005019180) Cod MODERN SPECIES 14 ENSGMOG00000022403 cdca8 (ENSGMOG00000009567) ENSGMOG00000009561 ENSGMOG00000031666 ago4 (ENSGMOG00000009544) CLSPN (ENSGMOG00000032830) ENSGMOG00000037177 ENSGMOG00000009525 psmb2 (ENSGMOG00000028958) TFAP2E (ENSGMOG00000009513) NCDN (ENSGMOG00000022584) KIAA0319L (ENSGMOG00000012803) ENSGMOG00000029342 ENSGMOG00000024806 ENSGMOG00000035476 ENSGMOG00000015918 ##22 ENSGMOG00000015901 rragcb (ENSGMOG00000015890) fhl3b (ENSGMOG00000033464) meaf6 (ENSGMOG00000007357) stpg1 (ENSGMOG00000024695) map7d1b (ENSGMOG00000022540) ENSGMOG00000001665 thrap3b (ENSGMOG00000023763) eva1bb (ENSGMOG00000017569) LSM10 (ENSGMOG00000019832) oscp1a (ENSGMOG00000017579) ENSGMOG00000017593 ENSGMOG00000026488 zc3h12ab (ENSGMOG00000030776) smim13 (ENSGMOG00000025692) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000166692 ENSGT00940000157740 ENSGT00940000154798.b ENSGT00530000063426.b.a ENSGT00940000164552 ENSGT00390000011115 ENSGT00390000008551 ENSGT00940000163648.b ENSGT00940000158729 ENSGT00390000012738 ENSGT00980000199207 ENSGT00640000091536 ENSGT00950000182848.c.b.b.a ENSGT00390000013601 ENSGT00940000157613 ENSGT00390000017955.c ##22 ENSGT00940000156790 ENSGT00940000166232 ENSGT00940000162741.a.b.a ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 ENSGT00940000156197 ENSGT00940000156221 ENSGT00940000166582 ENSGT00940000154576 ENSGT00940000158451 ENSGT00390000002919 ENSGT00940000155824.C.fc ENSGT00940000155272 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 284 ENSGT01100000264503 ENSGT00940000166692.h ENSGT00940000157740.c.a ENSGT00940000154798.b.b ENSGT00530000063426.b.a.d ENSGT00940000164552.l.b ENSGT00390000011115.c ENSGT00390000008551.d ENSGT00940000163648.b.h ENSGT00940000158729.u ENSGT00390000012738.u ENSGT00980000199207.e ENSGT00640000091536.r ENSGT00950000182848.c.b.b.a.f ENSGT00940000157613.m ENSGT00390000017955.c.vb ##22 ENSGT00940000156790.jb ENSGT00940000166232.g ENSGT00940000162741.a.b.a ENSGT01050000244827.E.v.b ENSGT00910000144211.b ENSGT00940000166197.f ENSGT00390000002428.a.c ENSGT00490000043398.e ENSGT00940000156197.hb ENSGT00940000156221.t ENSGT00940000166582.c ENSGT00940000154576.fb.a ENSGT00940000158451.f Salmoninae_a ANCESTRAL SPECIES 5 ENSGT01100000264503.b ENSGT00940000166692.h ENSGT00940000157740.c.a ENSGT00940000154798.b.b ENSGT00530000063426.b.a.d ENSGT00940000164552.l.b ENSGT00390000011115.c ENSGT00390000008551.d ENSGT00940000163648.b.h ENSGT00940000158729.u ENSGT00390000012738.u ENSGT00980000199207.e ENSGT00640000091536.r ENSGT00950000182848.c.b.b.a.f ENSGT00940000157613.m ENSGT00390000017955.c.vb ##22 ENSGT00940000156790.jb ENSGT00940000166232.g ENSGT00940000162741.a.b.a ENSGT01050000244827.E.v.b ENSGT00910000144211.b ENSGT00940000166197.f ENSGT00390000002428.a.c ENSGT00490000043398.e ENSGT00940000156197.hb ENSGT00940000156221.t ENSGT00940000166582.c ENSGT00940000154576.fb.a ENSGT00940000158451.f ENSGT00390000002919.c ENSGT00940000155824.C.fc.a Salmo ANCESTRAL SPECIES 40 ENSGT00390000010887.b.g ENSGT00940000166692.h ENSGT00940000157740.c.a ENSGT00940000154798.b.b ENSGT00530000063426.b.a.d ENSGT00940000164552.l.b ENSGT00390000011115.c ENSGT00390000008551.d ENSGT00940000163648.b.h ENSGT00940000158729.u ENSGT00390000012738.u ENSGT00980000199207.e ENSGT00640000091536.r ENSGT00950000182848.c.b.b.a.f ENSGT00940000157613.m ENSGT00390000017955.c.vb ##22 ENSGT00940000156790.jb ENSGT00940000166232.g ENSGT00940000162741.a.b.a ENSGT01050000244827.E.v.b ENSGT00910000144211.b ENSGT00940000166197.f ENSGT00390000002428.a.c ENSGT00490000043398.e ENSGT00940000156197.hb ENSGT00940000156221.t ENSGT00940000166582.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b.d ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.a ENSGT00940000158451.f Atlantic salmon MODERN SPECIES 19 anxa14 (ENSSSAG00000077690) ENSSSAG00000077697 ENSSSAG00000077720 ENSSSAG00000077774 ENSSSAG00000078291 cdca8 (ENSSSAG00000078302) ENSSSAG00000078304 ENSSSAG00000084511 ago4 (ENSSSAG00000078328) ENSSSAG00000108325 CLSPN (ENSSSAG00000078544) ENSSSAG00000054202 PSB2 (ENSSSAG00000078549) TFAP2E (ENSSSAG00000078555) KIAA0319L (ENSSSAG00000078564) cap1 (ENSSSAG00000078634) ##22 ppt1 (ENSSSAG00000078788) ENSSSAG00000078824 EF1A (ENSSSAG00000078842) ENSSSAG00000112829 rpl11 (ENSSSAG00000078865) ENSSSAG00000063037 eloa (ENSSSAG00000078873) lypla2 (ENSSSAG00000078884) sfpq (ENSSSAG00000078900) ENSSSAG00000078909 ENSSSAG00000102468 illr4 (ENSSSAG00000086924) illr4 (ENSSSAG00000078920) ENSSSAG00000078929 ENSSSAG00000079413 River trout MODERN SPECIES 27 zgc:114119 (ENSSTUG00000042239) anxa14 (ENSSTUG00000042285) ENSSTUG00000042327 ENSSTUG00000042439 ENSSTUG00000042669 ENSSTUG00000043462 cdca8 (ENSSTUG00000043502) ENSSTUG00000043535 ENSSTUG00000043549 ago4 (ENSSTUG00000043607) CLSPN (ENSSTUG00000044221) ENSSTUG00000044235 psmb2 (ENSSTUG00000044237) tfap2e (ENSSTUG00000044254) KIAA0319L (ENSSTUG00000044284) cap1 (ENSSTUG00000045016) ##22 ppt1 (ENSSTUG00000045305) ENSSTUG00000045403 eef1a1l1 (ENSSTUG00000045438) rpl11 (ENSSTUG00000045518) ENSSTUG00000045546 eloa (ENSSTUG00000045554) pithd1 (ENSSTUG00000045576) lypla2 (ENSSTUG00000045592) sfpq (ENSSTUG00000045688) ENSSTUG00000045712 ENSSTUG00000045742 ENSSTUG00000045723 illr4 (ENSSTUG00000045764) ENSSTUG00000045778 ENSSTUG00000045789 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT01100000264503.b ENSGT00940000166692.h ENSGT00940000157740.c.a ENSGT00940000154798.b.b ENSGT00530000063426.b.a.d ENSGT00940000164552.l.b ENSGT00390000011115.c ENSGT01000000220389 ENSGT00940000163648.b.h ENSGT00940000158729.u ENSGT00390000012738.u ENSGT00980000199207.e ENSGT00640000091536.r ENSGT00950000182848.c.b.b.a.f ENSGT00940000157613.m ENSGT00390000017955.c.vb ##22 ENSGT00940000156790.jb ENSGT00940000166232.g ENSGT00940000162741.a.b.a ENSGT01050000244827.E.v.b ENSGT00910000144211.b ENSGT00940000166197.f ENSGT00390000002428.a.c ENSGT00490000043398.e ENSGT00940000156197.hb ENSGT00940000156221.t ENSGT00940000166582.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00940000154576.fb.a ENSGT00940000158451.f ENSGT00390000002919.c Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000163960.a.c ENSGT00390000010887.b.g ENSGT00940000166692.h ENSGT00940000157740.c.a ENSGT00940000154798.b.b ENSGT00530000063426.b.a.d ENSGT00940000164552.l.b ENSGT00390000011115.c ENSGT01000000220389 ENSGT00940000163648.b.h ENSGT00940000158729.u ENSGT00390000012738.u ENSGT00640000091536.r ENSGT00950000182848.c.b.b.a.f ENSGT00940000157613.m ENSGT00390000017955.c.vb ##22 ENSGT00940000156790.jb ENSGT00940000166232.g ENSGT00940000162741.a.b.a ENSGT01050000244827.E.v.b ENSGT00910000144211.b ENSGT00940000166197.f ENSGT00390000002428.a.c ENSGT00490000043398.e ENSGT00940000156197.hb ENSGT00940000156221.t ENSGT00940000166582.c ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.a.a.b ENSGT00940000154576.fb.a ENSGT00940000158451.f ENSGT00390000002919.c Chinook salmon MODERN SPECIES 4 zgc:114119 (ENSOTSG00005010153) anxa14 (ENSOTSG00005010152) ENSOTSG00005010150 ENSOTSG00005010146 ENSOTSG00005010145 ENSOTSG00005010134 cdca8 (ENSOTSG00005010131) ENSOTSG00005010130 ENSOTSG00005010128 ago4 (ENSOTSG00005010121) CLSPN (ENSOTSG00005010118) psmb2 (ENSOTSG00005010117) tfap2e (ENSOTSG00005010116) ENSOTSG00005010115 KIAA0319L (ENSOTSG00005009241) cap1 (ENSOTSG00005008865) ##22 ppt1 (ENSOTSG00005008837) ENSOTSG00005008759 eef1a1l1 (ENSOTSG00005008758) eef1a1l1 (ENSOTSG00005008757) ENSOTSG00005008756 rpl11 (ENSOTSG00005008752) ENSOTSG00005008738 eloa (ENSOTSG00005008737) pithd1 (ENSOTSG00005008736) lypla2 (ENSOTSG00005008718) sfpq (ENSOTSG00005008716) ENSOTSG00005008713 ak2 (ENSOTSG00005008712) ENSOTSG00005008711 rnf19b (ENSOTSG00005008707) Rainbow trout MODERN SPECIES 9 ENSOMYG00000034550 ENSOMYG00000053858 ENSOMYG00000055018 ENSOMYG00000034576 ENSOMYG00000077820 ENSOMYG00000034594 ENSOMYG00000034608 ENSOMYG00000034614 AGO4 (ENSOMYG00000034805) CLSPN (ENSOMYG00000037296) ENSOMYG00000068973 psb2 (ENSOMYG00000037332) TFAP2E (ENSOMYG00000037371) KIAA0319L (ENSOMYG00000037509) ENSOMYG00000051540 cap1 (ENSOMYG00000038600) ##22 ppt1 (ENSOMYG00000038319) ENSOMYG00000038410 ENSOMYG00000039261 ENSOMYG00000039329 rl11 (ENSOMYG00000039361) ENSOMYG00000039403 eloa (ENSOMYG00000039444) pithd1 (ENSOMYG00000039482) lypla2 (ENSOMYG00000039558) ENSOMYG00000039146 ENSOMYG00000039627 ENSOMYG00000039651 illr4 (ENSOMYG00000039693) ak2 (ENSOMYG00000039714) rnf19b (ENSOMYG00000039747) Huchen MODERN SPECIES 756 ENSHHUG00000009705 ENSHHUG00000009712 ENSHHUG00000009727 cdca8 (ENSHHUG00000009731) c19h1orf109 (ENSHHUG00000009741) ENSHHUG00000009753 ago4 (ENSHHUG00000009771) ENSHHUG00000010816 ENSHHUG00000010842 psmb2 (ENSHHUG00000010843) ENSHHUG00000010846 KIAA0319L (ENSHHUG00000010857) cap1 (ENSHHUG00000010925) ##22 ppt1 (ENSHHUG00000011019) ENSHHUG00000011142 ENSHHUG00000011165 ENSHHUG00000011937 rpl11 (ENSHHUG00000011940) ENSHHUG00000012017 eloa (ENSHHUG00000012020) pithd1 (ENSHHUG00000012031) lypla2 (ENSHHUG00000012039) sfpq (ENSHHUG00000012098) ENSHHUG00000012167 ENSHHUG00000012212 illr4 (ENSHHUG00000012231) illr4 (ENSHHUG00000012252) ENSHHUG00000012261 Salmoninae ANCESTRAL SPECIES 478 ENSGT00940000164552.l.a ENSGT00390000011115.d ENSGT00390000008551.c ENSGT00940000163648.b.g ENSGT00940000158729.v ENSGT00390000012738.v ENSGT00980000199207.f ENSGT00640000091536.q ENSGT00950000182848.c.b.b.a.e ENSGT00390000013601 ENSGT00940000157613.n ENSGT00390000017955.c.wb ##22 ENSGT00940000156790.kb ENSGT00940000166232.h ENSGT00940000162741.a.a ENSGT00940000162741.a.b.b ENSGT01050000244827.E.v.a ENSGT00910000144211.a ENSGT00940000166197.e ENSGT00390000002428.a.d ENSGT00490000043398.f ENSGT00940000156197.ib Salmoninae_a ANCESTRAL SPECIES 48 ENSGT00390000010887.b.h ENSGT00940000157740.c.b ENSGT00940000154798.b.a ENSGT00530000063426.b.a.c ENSGT00940000164552.l.a ENSGT00390000011115.d ENSGT00390000008551.c ENSGT00940000163648.b.g ENSGT00940000158729.v ENSGT00390000012738.v ENSGT00980000199207.f ENSGT00640000091536.q ENSGT00950000182848.c.b.b.a.e ENSGT00390000013601 ENSGT00940000157613.n ENSGT00390000017955.c.wb ##22 ENSGT00940000156790.kb ENSGT00940000166232.h ENSGT00940000162741.a.a ENSGT00940000171801 ENSGT00940000162741.a.b.b ENSGT01050000244827.E.v.a ENSGT00910000144211.a ENSGT00940000166197.e ENSGT00390000002428.a.d ENSGT00490000043398.f ENSGT00940000156197.ib ENSGT00940000156221.s ENSGT00940000166582.d ENSGT00940000155272.pc ENSGT00940000155824.C.fc.b Oncorhynchus ANCESTRAL SPECIES 40 ENSGT01060000253693 ENSGT00940000157740.c.b ENSGT00940000154798.b.a ENSGT00530000063426.b.a.c ENSGT00940000164552.l.a ENSGT00390000011115.d ENSGT00390000008551.c ENSGT00940000163648.b.g ENSGT00940000158729.v ENSGT00390000012738.v ENSGT00980000199207.f ENSGT00640000091536.q ENSGT00950000182848.c.b.b.a.e ENSGT00390000013601 ENSGT00940000157613.n ENSGT00390000017955.c.wb ##22 ENSGT00940000156790.kb ENSGT00940000166232.h ENSGT00940000162741.a.a ENSGT00940000162741.a.b.b ENSGT01050000244827.E.v.a ENSGT00910000144211.a ENSGT00940000166197.e ENSGT00390000002428.a.d ENSGT00490000043398.f ENSGT00940000156197.ib ENSGT00940000156221.s ENSGT00940000166582.d ENSGT00940000155272.pc ENSGT00940000155824.C.fc.b ENSGT00390000002919.d Rainbow trout MODERN SPECIES 24 ENSOMYG00000075479 ENSOMYG00000040860 ENSOMYG00000058047 ENSOMYG00000040704 ENSOMYG00000052944 cdca8 (ENSOMYG00000040505) ENSOMYG00000040490 ENSOMYG00000040485 ago4 (ENSOMYG00000040454) CLSPN (ENSOMYG00000040361) ENSOMYG00000051165 psmb2 (ENSOMYG00000040345) TFAP2E (ENSOMYG00000040338) NCDN (ENSOMYG00000040331) KIAA0319L (ENSOMYG00000039614) cap1 (ENSOMYG00000038787) ##22 ppt1 (ENSOMYG00000038515) ENSOMYG00000051344 ENSOMYG00000063743 ENSOMYG00000038328 ENSOMYG00000072782 rpl11 (ENSOMYG00000038244) ENSOMYG00000038220 eloa (ENSOMYG00000038203) pithd1 (ENSOMYG00000038179) lypla2 (ENSOMYG00000038159) ENSOMYG00000038129 ENSOMYG00000037994 ENSOMYG00000037827 bmp8a (ENSOMYG00000037619) ENSOMYG00000025159 Oncorhynchus_a ANCESTRAL SPECIES 45 ENSGT01060000253693 ENSGT00940000157740.c.b ENSGT00940000154798.b.a ENSGT00530000063426.b.a.c ENSGT00940000164552.l.a ENSGT00390000011115.d ENSGT00390000008551.c ENSGT00940000163648.b.g ENSGT00940000158729.v ENSGT00390000012738.v ENSGT00980000199207.f ENSGT00640000091536.q ENSGT00950000182848.c.b.b.a.e ENSGT00390000013601 ENSGT00940000157613.n ENSGT00390000017955.c.wb ##22 ENSGT00940000156790.kb ENSGT00940000166232.h ENSGT00940000162741.a.a ENSGT00940000162741.a.b.b ENSGT01050000244827.E.v.a ENSGT00910000144211.a ENSGT00940000166197.e ENSGT00390000002428.a.d ENSGT00490000043398.f ENSGT00940000156197.ib ENSGT00940000156221.s ENSGT00940000166582.d ENSGT00940000155272.pc ENSGT00940000155824.C.fc.b ENSGT00390000002919.d Chinook salmon MODERN SPECIES 24 ENSOTSG00005029740 ENSOTSG00005029739 ENSOTSG00005029738 ENSOTSG00005027931 ENSOTSG00005027923 cdca8 (ENSOTSG00005027922) c19h1orf109 (ENSOTSG00005033307) ENSOTSG00005033299 ago4 (ENSOTSG00005030373) CLSPN (ENSOTSG00005030341) ENSOTSG00005030340 psmb2 (ENSOTSG00005030335) tfap2e (ENSOTSG00005030334) NCDN (ENSOTSG00005030332) KIAA0319L (ENSOTSG00005030082) cap1 (ENSOTSG00005029506) ##22 ppt1 (ENSOTSG00005029495) ENSOTSG00005029494 ENSOTSG00005029492 eef1a1l1 (ENSOTSG00005029454) eef1a1l1 (ENSOTSG00005029389) ENSOTSG00005029387 rpl11 (ENSOTSG00005029385) ENSOTSG00005029383 eloa (ENSOTSG00005029382) pithd1 (ENSOTSG00005029381) lypla2 (ENSOTSG00005029380) sfpq (ENSOTSG00005029377) ENSOTSG00005028551 bmp8a (ENSOTSG00005028542) MACF1 (ENSOTSG00005028171) Coho salmon MODERN SPECIES 5 ENSOKIG00005014382 ENSOKIG00005014435 ENSOKIG00005014784 ARHGDIA (ENSOKIG00005014810) ENSOKIG00005014816 cdca8 (ENSOKIG00005014820) c19h1orf109 (ENSOKIG00005014832) ENSOKIG00005014843 ago4 (ENSOKIG00005014889) CLSPN (ENSOKIG00005015558) ENSOKIG00005015583 psmb2 (ENSOKIG00005015590) tfap2e (ENSOKIG00005015615) NCDN (ENSOKIG00005015636) KIAA0319L (ENSOKIG00005015657) cap1 (ENSOKIG00005016146) ##22 ppt1 (ENSOKIG00005016320) ENSOKIG00005016775 ENSOKIG00005016821 ENSOKIG00005016848 ENSOKIG00005016927 rpl11 (ENSOKIG00005016939) ENSOKIG00005016985 eloa (ENSOKIG00005017004) pithd1 (ENSOKIG00005017029) lypla2 (ENSOKIG00005017065) ENSOKIG00005010891 ENSOKIG00005010958 bmp8a (ENSOKIG00005011250) MACF1 (ENSOKIG00005011602) NDUFS5 (ENSOKIG00005014913) Salmo ANCESTRAL SPECIES 2 ENSGT00390000010887.b.h ENSGT00940000157740.c.b ENSGT00940000154798.b.a ENSGT00530000063426.b.a.c ENSGT00940000164552.l.a ENSGT00390000011115.d ENSGT00390000008551.c ENSGT00940000163648.b.g ENSGT00940000158729.v ENSGT00390000012738.v ENSGT00980000199207.f ENSGT00640000091536.q ENSGT00950000182848.c.b.b.a.e ENSGT00390000013601 ENSGT00940000157613.n ENSGT00390000017955.c.wb ##22 ENSGT00940000156790.kb ENSGT00940000166232.h ENSGT00940000162741.a.a ENSGT00940000171801 ENSGT00940000162741.a.b.b ENSGT01050000244827.E.v.a ENSGT00910000144211.a ENSGT00940000166197.e ENSGT00390000002428.a.d ENSGT00490000043398.f ENSGT00940000156197.ib ENSGT00940000156221.s.a ENSGT00940000166582.d ENSGT00940000155272.pc ENSGT00940000155824.C.fc.b River trout MODERN SPECIES 29 ENSSTUG00000023566 ENSSTUG00000023482 ENSSTUG00000023415 ENSSTUG00000022730 ENSSTUG00000022654 cdca8 (ENSSTUG00000035826) c19h1orf109 (ENSSTUG00000035809) ENSSTUG00000035805 ago4 (ENSSTUG00000035051) CLSPN (ENSSTUG00000034997) ENSSTUG00000034985 psmb2 (ENSSTUG00000034970) tfap2e (ENSSTUG00000034939) NCDN (ENSSTUG00000034918) KIAA0319L (ENSSTUG00000033808) cap1 (ENSSTUG00000033372) ##22 ppt1 (ENSSTUG00000033301) ENSSTUG00000033279 eef1a1l1 (ENSSTUG00000033175) ENSSTUG00000033148 rpl11 (ENSSTUG00000033117) ENSSTUG00000033112 eloa (ENSSTUG00000033087) pithd1 (ENSSTUG00000033068) lypla2 (ENSSTUG00000033052) sfpq (ENSSTUG00000033012) ENSSTUG00000032592 bmp8a (ENSSTUG00000032482) MACF1 (ENSSTUG00000029930) ndufs5 (ENSSTUG00000029857) rnf19b (ENSSTUG00000029829) Huchen MODERN SPECIES 1189 ENSHHUG00000022694 ENSHHUG00000022686 cdca8 (ENSHHUG00000022670) c19h1orf109 (ENSHHUG00000022665) ENSHHUG00000022661 ago4 (ENSHHUG00000022521) CLSPN (ENSHHUG00000022477) psmb2 (ENSHHUG00000022434) tfap2e (ENSHHUG00000022426) NCDN (ENSHHUG00000022420) KIAA0319L (ENSHHUG00000022365) cap1 (ENSHHUG00000022171) ##22 ppt1 (ENSHHUG00000022088) ENSHHUG00000022075 eef1a1l1 (ENSHHUG00000022067) eef1a1l1 (ENSHHUG00000021754) ENSHHUG00000021748 rpl11 (ENSHHUG00000021625) ENSHHUG00000021620 eloa (ENSHHUG00000021613) Northern pike MODERN SPECIES 9 anxa14 (ENSELUG00000024509) ENSELUG00000024436 ENSELUG00000024303 ENSELUG00000024241 ENSELUG00000024159 cdca8 (ENSELUG00000024010) c19h1orf109 (ENSELUG00000023954) ENSELUG00000025503 ENSELUG00000023893 ago4 (ENSELUG00000023873) CLSPN (ENSELUG00000023814) ENSELUG00000023757 psmb2 (ENSELUG00000023751) NCDN (ENSELUG00000023661) KIAA0319L (ENSELUG00000023643) cap1 (ENSELUG00000023632) ##22 ppt1 (ENSELUG00000023606) ENSELUG00000023544 eef1a1l1 (ENSELUG00000024953) eef1a1l1 (ENSELUG00000023536) ENSELUG00000023422 rpl11 (ENSELUG00000023364) ENSELUG00000023318 eloa (ENSELUG00000023273) pithd1 (ENSELUG00000026203) lypla2 (ENSELUG00000023195) sfpq (ENSELUG00000023145) zmym4.1 (ENSELUG00000023076) ENSELUG00000026075 ENSELUG00000028507 ak2 (ENSELUG00000023018) Spotted gar MODERN SPECIES 672 tekt2 (ENSLOCG00000000469) ago1 (ENSLOCG00000000504) ago4 (ENSLOCG00000000584) CLSPN (ENSLOCG00000000631) C1orf216 (ENSLOCG00000000664) psmb2 (ENSLOCG00000000700) tfap2e (ENSLOCG00000000725) NCDN (ENSLOCG00000000757) ENSLOCG00000000785 adprs (ENSLOCG00000000800) cap1 (ENSLOCG00000000820) ##22 ppt1 (ENSLOCG00000000848) ENSLOCG00000000882 ENSLOCG00000000907 ENSLOCG00000000926 rpl11 (ENSLOCG00000000953) ENSLOCG00000000972 eloa (ENSLOCG00000000997) pithd1 (ENSLOCG00000001023) lypla2 (ENSLOCG00000001047) sfpq (ENSLOCG00000001067) rnf19b (ENSLOCG00000001101) ak2 (ENSLOCG00000001124) ENSLOCG00000001148 ndufs5 (ENSLOCG00000001164) MACF1 (ENSLOCG00000001182) Reedfish DUPLICATION Reedfish MODERN SPECIES 5 PNMT (ENSECRG00000015719) pgap3 (ENSECRG00000015644) erbb2 (ENSECRG00000015535) selenow2a (ENSECRG00000015452) bmp8a (ENSECRG00000015413) ago3b (ENSECRG00000013697) AGO1 (ENSECRG00000013213) ago4 (ENSECRG00000012804) CLSPN (ENSECRG00000012629) C1orf216 (ENSECRG00000012605) psmb2 (ENSECRG00000012592) tfap2e (ENSECRG00000012554) NCDN (ENSECRG00000012527) KIAA0319L (ENSECRG00000012492) adprs (ENSECRG00000012469) cap1 (ENSECRG00000012448) ##22 ppt1 (ENSECRG00000012428) cap1 (ENSECRG00000012381) ##22 ENSECRG00000012332 eef1a1l1 (ENSECRG00000012293) ENSECRG00000012251 rpl11 (ENSECRG00000012214) ENSECRG00000012190 eloa (ENSECRG00000012172) pithd1 (ENSECRG00000012150) lypla2 (ENSECRG00000012133) sfpq (ENSECRG00000012100) TMEM35B (ENSECRG00000012075) ZMYM4 (ENSECRG00000012035) gmeb1 (ENSECRG00000012007) ENSECRG00000011974 Reedfish MODERN SPECIES 5 erbb2 (ENSECRG00000015535) selenow2a (ENSECRG00000015452) bmp8a (ENSECRG00000015413) ago3b (ENSECRG00000013697) AGO1 (ENSECRG00000013213) ago4 (ENSECRG00000012804) CLSPN (ENSECRG00000012629) C1orf216 (ENSECRG00000012605) psmb2 (ENSECRG00000012592) tfap2e (ENSECRG00000012554) NCDN (ENSECRG00000012527) KIAA0319L (ENSECRG00000012492) adprs (ENSECRG00000012469) cap1 (ENSECRG00000012448) ##22 ppt1 (ENSECRG00000012428) cap1 (ENSECRG00000012381) ##22 ENSECRG00000012332 eef1a1l1 (ENSECRG00000012293) ENSECRG00000012251 rpl11 (ENSECRG00000012214) ENSECRG00000012190 eloa (ENSECRG00000012172) pithd1 (ENSECRG00000012150) lypla2 (ENSECRG00000012133) sfpq (ENSECRG00000012100) TMEM35B (ENSECRG00000012075) ZMYM4 (ENSECRG00000012035) gmeb1 (ENSECRG00000012007) ENSECRG00000011974 taf12 (ENSECRG00000011946) ENSECRG00000011928 Elephant shark MODERN SPECIES 1712 ENSCMIG00000006263 psmb2 (ENSCMIG00000006267) tfap2e (ENSCMIG00000006269) ENSCMIG00000006270 ago4 (ENSCMIG00000006337) ago1 (ENSCMIG00000006640) tekt2 (ENSCMIG00000006786) ENSCMIG00000006807 #21 cap1 (ENSCMIG00000006811) ##22 ppt1 (ENSCMIG00000006835) ENSCMIG00000006892 ENSCMIG00000006936 ENSCMIG00000007023 ELOA (ENSCMIG00000007026) gale (ENSCMIG00000007031) lypla2 (ENSCMIG00000007036) pithd1 (ENSCMIG00000007037) hmgcl (ENSCMIG00000007040) bmp8a (ENSCMIG00000007069) MACF1 (ENSCMIG00000007149) ndufs5 (ENSCMIG00000007330)