Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Glires ANCESTRAL SPECIES 3 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Rodentia ANCESTRAL SPECIES 4 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Myomorpha ANCESTRAL SPECIES ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Lesser Egyptian jerboa MODERN SPECIES 112 Poldip2 (ENSJJAG00000016890) #7 ENSJJAG00000023956 #8 ENSJJAG00000023770 #9 ENSJJAG00000005855 #10 Nlk (ENSJJAG00000023496) #11 Ccnq (ENSJJAG00000014047) #12 Lyrm9 (ENSJJAG00000018903) #13 Nos2 (ENSJJAG00000008903) #14 ENSJJAG00000019969 #15 ENSJJAG00000000471 #16 ENSJJAG00000022499 #17 ENSJJAG00000017336 #18 ENSJJAG00000024274 #19 Omg (ENSJJAG00000007985) #20 Nf1 (ENSJJAG00000013929) #21 Rab11fip4 (ENSJJAG00000019657) #22 Utp6 (ENSJJAG00000013572) #23 Suz12 (ENSJJAG00000018934) #24 Atad5 (ENSJJAG00000015228) #25 Adap2 (ENSJJAG00000015864) #26 ENSJJAG00000023784 #27 Rhot1 (ENSJJAG00000010112) #28 Rhbdl3 (ENSJJAG00000010070) #29 ENSJJAG00000023980 #30 ENSJJAG00000017956 #31 Psmd11 (ENSJJAG00000015236) #32 Cdk5r1 (ENSJJAG00000010662) #33 Myo1d (ENSJJAG00000015684) #34 Tmem98 (ENSJJAG00000017013) #35 Spaca3 (ENSJJAG00000023074) #36 ENSJJAG00000022033 #37 Muroidea ANCESTRAL SPECIES ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Cricetidae ANCESTRAL SPECIES ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Cricetidae_B ANCESTRAL SPECIES ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Northern American deer mouse MODERN SPECIES 21 Ift20 (ENSPEMG00000005158) #9 Tmem97 (ENSPEMG00000029890) #10 Nlk (ENSPEMG00000028887) #11 Ccnq (ENSPEMG00000008814) #12 Lyrm9 (ENSPEMG00000010700) #13 ENSPEMG00000026563 Nos2 (ENSPEMG00000004104) #14 Lgals9 (ENSPEMG00000017761) Ksr1 (ENSPEMG00000013255) #16 Wsb1 (ENSPEMG00000016763) #18 Nf1 (ENSPEMG00000015586) #21 ENSPEMG00000027432 Omg (ENSPEMG00000012789) #20 Evi2b (ENSPEMG00000011425) Evi2a (ENSPEMG00000009997) Rab11fip4 (ENSPEMG00000017840) #22 Utp6 (ENSPEMG00000014081) #23 Suz12 (ENSPEMG00000019235) #24 Crlf3 (ENSPEMG00000018811) ##25 Atad5 (ENSPEMG00000012850) #25 Tefm (ENSPEMG00000016212) Adap2 (ENSPEMG00000002187) #26 ENSPEMG00000018511 #27 Rhot1 (ENSPEMG00000015998) #28 Rhbdl3 (ENSPEMG00000017609) #29 5730455P16Rik (ENSPEMG00000007661) #30 ENSPEMG00000031231 Zfp207 (ENSPEMG00000009110) Psmd11 (ENSPEMG00000015029) #32 Cdk5r1 (ENSPEMG00000004672) #33 Myo1d (ENSPEMG00000021437) #34 Prairie vole MODERN SPECIES 15 Tmem97 (ENSMOCG00000022041) #10 ENSMOCG00000001900 Nlk (ENSMOCG00000015184) #11 Ccnq (ENSMOCG00000002415) #12 Lyrm9 (ENSMOCG00000019807) #13 Nos2 (ENSMOCG00000010402) #14 Lgals9 (ENSMOCG00000022162) Ksr1 (ENSMOCG00000007995) #16 ENSMOCG00000021867 #18 ENSMOCG00000008178 #18 ENSMOCG00000005083 #18 Omg (ENSMOCG00000008768) #20 Evi2b (ENSMOCG00000017970) Evi2a (ENSMOCG00000003867) Nf1 (ENSMOCG00000013672) #21 Rab11fip4 (ENSMOCG00000016866) #22 Utp6 (ENSMOCG00000014163) #23 Suz12 (ENSMOCG00000019023) #24 Crlf3 (ENSMOCG00000012869) ##25 Atad5 (ENSMOCG00000003812) #25 Tefm (ENSMOCG00000000789) Adap2 (ENSMOCG00000012833) #26 ENSMOCG00000008236 #27 Rhot1 (ENSMOCG00000018397) #28 Rhbdl3 (ENSMOCG00000018973) #29 5730455P16Rik (ENSMOCG00000020781) #30 Zfp207 (ENSMOCG00000017262) ENSMOCG00000010820 #32 ENSMOCG00000012529 #32 Cdk5r1 (ENSMOCG00000001690) #33 Myo1d (ENSMOCG00000018702) #34 Cricetinae ANCESTRAL SPECIES ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Golden Hamster MODERN SPECIES 684 Poldip2 (ENSMAUG00000018090) #7 Tnfaip1 (ENSMAUG00000010529) #8 Ift20 (ENSMAUG00000017928) #9 Tmem97 (ENSMAUG00000016114) #10 Nlk (ENSMAUG00000017286) #11 Ccnq (ENSMAUG00000009944) #12 Lyrm9 (ENSMAUG00000011080) #13 Nos2 (ENSMAUG00000016350) #14 Lgals9 (ENSMAUG00000010512) Ksr1 (ENSMAUG00000007581) #16 Wsb1 (ENSMAUG00000003418) #18 Omg (ENSMAUG00000000920) #20 Evi2b (ENSMAUG00000021786) Evi2a (ENSMAUG00000011179) Nf1 (ENSMAUG00000021534) #21 Rab11fip4 (ENSMAUG00000012204) #22 Utp6 (ENSMAUG00000021895) #23 Suz12 (ENSMAUG00000001677) #24 Crlf3 (ENSMAUG00000001238) ##25 Atad5 (ENSMAUG00000019548) #25 Tefm (ENSMAUG00000006565) Adap2 (ENSMAUG00000001797) #26 ENSMAUG00000022173 #27 Rhot1 (ENSMAUG00000021776) #28 Rhbdl3 (ENSMAUG00000020013) #29 5730455P16Rik (ENSMAUG00000007002) #30 Zfp207 (ENSMAUG00000008892) Psmd11 (ENSMAUG00000019073) #32 Cdk5r1 (ENSMAUG00000021140) #33 ENSMAUG00000009545 Myo1d (ENSMAUG00000013009) #34 Chinese hamster chok1gshd MODERN SPECIES 374 ENSCGRG00001004794 Omg (ENSCGRG00001003552) #20 Evi2b (ENSCGRG00001002438) Evi2a (ENSCGRG00001001421) Nf1 (ENSCGRG00001015811) #21 Rab11fip4 (ENSCGRG00001011772) #22 Utp6 (ENSCGRG00001000046) #23 Suz12 (ENSCGRG00001012460) #24 ENSCGRG00001008689 ##25 Atad5 (ENSCGRG00001015531) #25 Tefm (ENSCGRG00001014415) Adap2 (ENSCGRG00001013794) #26 ENSCGRG00001013219 #27 Rhot1 (ENSCGRG00001018128) #28 Rhbdl3 (ENSCGRG00001011616) #29 5730455P16Rik (ENSCGRG00001011069) #30 Zfp207 (ENSCGRG00001018133) Psmd11 (ENSCGRG00001014740) #32 Cdk5r1 (ENSCGRG00001014057) #33 Myo1d (ENSCGRG00001020403) #34 Murinae ANCESTRAL SPECIES 6 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00940000164538 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Mus ANCESTRAL SPECIES 2 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00940000164538 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Mus_A ANCESTRAL SPECIES 2 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00940000164538 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a.q #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Mus_B ANCESTRAL SPECIES 2 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00940000164538 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a.q #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Mouse MODERN SPECIES 2 Poldip2 (ENSMUSG00000001100) #7 Tnfaip1 (ENSMUSG00000017615) #8 Ift20 (ENSMUSG00000001105) #9 Tmem97 (ENSMUSG00000037278) #10 Nlk (ENSMUSG00000017376) #11 Ccnq (ENSMUSG00000049489) #12 Lyrm9 (ENSMUSG00000072640) #13 Nos2 (ENSMUSG00000020826) #14 Lgals9 (ENSMUSG00000001123) Ksr1 (ENSMUSG00000018334) #16 Wsb1 (ENSMUSG00000017677) #18 Nf1 (ENSMUSG00000020716) #21 Omg (ENSMUSG00000049612) #20 Evi2b (ENSMUSG00000093938) Evi2a (ENSMUSG00000078771) Rab11fip4 (ENSMUSG00000017639) #22 Utp6 (ENSMUSG00000035575) #23 Suz12 (ENSMUSG00000017548) #24 Crlf3 (ENSMUSG00000017561) ##25 Atad5 (ENSMUSG00000017550) #25 Tefm (ENSMUSG00000046909) Adap2 (ENSMUSG00000020709) #26 Rnf135 (ENSMUSG00000020707) Rhot1 (ENSMUSG00000017686) #28 Rhbdl3 (ENSMUSG00000017692) #29 5730455P16Rik (ENSMUSG00000057181) #30 Zfp207 (ENSMUSG00000017421) Psmd11 (ENSMUSG00000017428) #32 Cdk5r1 (ENSMUSG00000048895) #33 Myo1d (ENSMUSG00000035441) #34 Tmem98 (ENSMUSG00000035413) #35 Mus_C ANCESTRAL SPECIES 3 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00940000155445 #12 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00550000074797.b #21 ENSGT00440000033742.a.b #22 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00940000164538 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a.q #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 ENSGT00390000012062 #35 spretus MODERN SPECIES 2 Ift20 (MGP_SPRETEiJ_G0017656) #9 Tmem97 (MGP_SPRETEiJ_G0017657) #10 Nlk (MGP_SPRETEiJ_G0017658) #11 Ccnq (MGP_SPRETEiJ_G0017659) #12 Lyrm9 (MGP_SPRETEiJ_G0017660) #13 Nos2 (MGP_SPRETEiJ_G0017661) #14 Lgals9 (MGP_SPRETEiJ_G0017662) Ksr1 (MGP_SPRETEiJ_G0017663) #16 Wsb1 (MGP_SPRETEiJ_G0017664) #18 MGP_SPRETEiJ_G0017665 Nf1 (MGP_SPRETEiJ_G0017666) #21 Omg (MGP_SPRETEiJ_G0017667) #20 MGP_SPRETEiJ_G0017668 MGP_SPRETEiJ_G0017669 Evi2a (MGP_SPRETEiJ_G0017670) Rab11fip4 (MGP_SPRETEiJ_G0017671) #22 Utp6 (MGP_SPRETEiJ_G0017672) #23 Suz12 (MGP_SPRETEiJ_G0017673) #24 Crlf3 (MGP_SPRETEiJ_G0017674) ##25 Atad5 (MGP_SPRETEiJ_G0017675) #25 Tefm (MGP_SPRETEiJ_G0017676) Adap2 (MGP_SPRETEiJ_G0017677) #26 Rnf135 (MGP_SPRETEiJ_G0017678) Rhot1 (MGP_SPRETEiJ_G0017679) #28 Rhbdl3 (MGP_SPRETEiJ_G0017680) #29 5730455P16Rik (MGP_SPRETEiJ_G0017681) #30 Zfp207 (MGP_SPRETEiJ_G0017682) Psmd11 (MGP_SPRETEiJ_G0017683) #32 Cdk5r1 (MGP_SPRETEiJ_G0017684) #33 Myo1d (MGP_SPRETEiJ_G0017685) #34 Tmem98 (MGP_SPRETEiJ_G0017686) #35 Steppe mouse MODERN SPECIES 3351 ENSMSIG00000009862 Nlk (ENSMSIG00000009822) #11 ENSMSIG00000009812 Ccnq (ENSMSIG00000009802) #12 Lyrm9 (ENSMSIG00000009770) #13 ENSMSIG00000009763 Nos2 (ENSMSIG00000009679) #14 ENSMSIG00000009585 Ksr1 (ENSMSIG00000009362) #16 Wsb1 (ENSMSIG00000009309) #18 ENSMSIG00000009302 Omg (ENSMSIG00000009281) #20 Evi2b (ENSMSIG00000009267) Evi2a (ENSMSIG00000009262) Nf1 (ENSMSIG00000008704) #21 Rab11fip4 (ENSMSIG00000008628) #22 ENSMSIG00000008597 Utp6 (ENSMSIG00000008510) #23 Suz12 (ENSMSIG00000008361) #24 Crlf3 (ENSMSIG00000008282) ##25 Atad5 (ENSMSIG00000008129) #25 Tefm (ENSMSIG00000008088) Adap2 (ENSMSIG00000008061) #26 Rnf135 (ENSMSIG00000008044) Rhot1 (ENSMSIG00000007800) #28 Rhbdl3 (ENSMSIG00000007754) #29 5730455P16Rik (ENSMSIG00000007744) #30 Zfp207 (ENSMSIG00000007459) Psmd11 (ENSMSIG00000007357) #32 Cdk5r1 (ENSMSIG00000007341) #33 ENSMSIG00000007320 Ryukyu mouse MODERN SPECIES 2 Tnfaip1 (MGP_CAROLIEiJ_G0016812) #8 Ift20 (MGP_CAROLIEiJ_G0016813) #9 MGP_CAROLIEiJ_G0016814 #10 Nlk (MGP_CAROLIEiJ_G0016815) #11 Ccnq (MGP_CAROLIEiJ_G0016816) #12 MGP_CAROLIEiJ_G0016817 #13 Nos2 (MGP_CAROLIEiJ_G0016818) #14 Lgals9 (MGP_CAROLIEiJ_G0016819) Ksr1 (MGP_CAROLIEiJ_G0016820) #16 Wsb1 (MGP_CAROLIEiJ_G0016821) #18 Nf1 (MGP_CAROLIEiJ_G0016822) #21 Omg (MGP_CAROLIEiJ_G0016823) #20 MGP_CAROLIEiJ_G0016824 MGP_CAROLIEiJ_G0016825 Evi2a (MGP_CAROLIEiJ_G0016826) Rab11fip4 (MGP_CAROLIEiJ_G0016827) #22 Utp6 (MGP_CAROLIEiJ_G0016828) #23 Suz12 (MGP_CAROLIEiJ_G0016829) #24 Crlf3 (MGP_CAROLIEiJ_G0016830) ##25 Atad5 (MGP_CAROLIEiJ_G0016831) #25 Tefm (MGP_CAROLIEiJ_G0016832) Adap2 (MGP_CAROLIEiJ_G0016833) #26 Rnf135 (MGP_CAROLIEiJ_G0016834) Rhot1 (MGP_CAROLIEiJ_G0016835) #28 Rhbdl3 (MGP_CAROLIEiJ_G0016836) #29 5730455P16Rik (MGP_CAROLIEiJ_G0016837) #30 Zfp207 (MGP_CAROLIEiJ_G0016838) Psmd11 (MGP_CAROLIEiJ_G0016839) #32 Cdk5r1 (MGP_CAROLIEiJ_G0016840) #33 Myo1d (MGP_CAROLIEiJ_G0016841) #34 Tmem98 (MGP_CAROLIEiJ_G0016842) #35 Shrew mouse MODERN SPECIES 5 Tnfaip1 (MGP_PahariEiJ_G0017949) #8 Ift20 (MGP_PahariEiJ_G0017950) #9 MGP_PahariEiJ_G0017951 #10 Nlk (MGP_PahariEiJ_G0017952) #11 Ccnq (MGP_PahariEiJ_G0017953) #12 MGP_PahariEiJ_G0017954 #13 Nos2 (MGP_PahariEiJ_G0017955) #14 Lgals9 (MGP_PahariEiJ_G0017956) Ksr1 (MGP_PahariEiJ_G0017957) #16 Wsb1 (MGP_PahariEiJ_G0017958) #18 MGP_PahariEiJ_G0017959 #21 Omg (MGP_PahariEiJ_G0017960) #20 MGP_PahariEiJ_G0017961 MGP_PahariEiJ_G0017962 Evi2a (MGP_PahariEiJ_G0017963) Rab11fip4 (MGP_PahariEiJ_G0017964) #22 Utp6 (MGP_PahariEiJ_G0017965) #23 Suz12 (MGP_PahariEiJ_G0017966) #24 Crlf3 (MGP_PahariEiJ_G0017967) ##25 Atad5 (MGP_PahariEiJ_G0017968) #25 Tefm (MGP_PahariEiJ_G0017969) Adap2 (MGP_PahariEiJ_G0017970) #26 Rnf135 (MGP_PahariEiJ_G0017971) Rhot1 (MGP_PahariEiJ_G0017972) #28 MGP_PahariEiJ_G0017973 #29 5730455P16Rik (MGP_PahariEiJ_G0017974) #30 Zfp207 (MGP_PahariEiJ_G0017975) Psmd11 (MGP_PahariEiJ_G0017976) #32 Cdk5r1 (MGP_PahariEiJ_G0017977) #33 Myo1d (MGP_PahariEiJ_G0017978) #34 Tmem98 (MGP_PahariEiJ_G0017979) #35 Rat MODERN SPECIES 1 Tnfaip1 (ENSRNOG00000009069) #8 Ift20 (ENSRNOG00000008891) #9 Tmem97 (ENSRNOG00000008704) #11 Ccnq (ENSRNOG00000022582) #12 Lyrm9 (ENSRNOG00000037204) #13 Nos2 (ENSRNOG00000057443) #14 Lgals5 (ENSRNOG00000012557) Lgals9 (ENSRNOG00000012681) Ksr1 (ENSRNOG00000012818) #16 AABR07030085.1 (ENSRNOG00000023182) Wsb1 (ENSRNOG00000012929) #18 Nf1 (ENSRNOG00000013780) #21 Omg (ENSRNOG00000014107) #20 Evi2b (ENSRNOG00000014125) Evi2a (ENSRNOG00000022764) Rab11fip4 (ENSRNOG00000014135) #22 ENSRNOG00000069468 Utp6 (ENSRNOG00000014209) #23 LOC120095270 (ENSRNOG00000029115) ENSRNOG00000069932 Suz12 (ENSRNOG00000058663) #24 Crlf3 (ENSRNOG00000050657) ##25 Atad5 (ENSRNOG00000021903) #25 Tefm (ENSRNOG00000004000) Adap2 (ENSRNOG00000037148) #26 Rhot1 (ENSRNOG00000004093) #28 Rhbdl3 (ENSRNOG00000005515) #29 RGD1310429 (ENSRNOG00000000237) #30 Psmd11 (ENSRNOG00000005538) #32 Cdk5r1 (ENSRNOG00000068243) #33 Myo1d (ENSRNOG00000003276) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1773 Ift20 (ENSNGAG00000009753) #9 Tmem97 (ENSNGAG00000012768) #10 Nlk (ENSNGAG00000015020) #11 Ccnq (ENSNGAG00000014495) #12 Lyrm9 (ENSNGAG00000020149) #13 ENSNGAG00000000671 Nos2 (ENSNGAG00000014709) #14 ENSNGAG00000011827 #15 Ksr1 (ENSNGAG00000016123) #16 Wsb1 (ENSNGAG00000020694) #18 Nf1 (ENSNGAG00000004292) #21 ENSNGAG00000017260 Omg (ENSNGAG00000018355) #20 Evi2b (ENSNGAG00000017449) Evi2a (ENSNGAG00000020994) Rab11fip4 (ENSNGAG00000001437) #22 Utp6 (ENSNGAG00000015482) #23 ENSNGAG00000013204 Suz12 (ENSNGAG00000019582) #24 Crlf3 (ENSNGAG00000009802) ##25 Atad5 (ENSNGAG00000010738) #25 Tefm (ENSNGAG00000012952) Adap2 (ENSNGAG00000020102) #26 ENSNGAG00000002228 #27 Kangaroo rat MODERN SPECIES 350 Poldip2 (ENSDORG00000002565) #7 Tnfaip1 (ENSDORG00000026438) #8 Ift20 (ENSDORG00000002562) #9 Tmem97 (ENSDORG00000026680) #10 Nlk (ENSDORG00000010252) #11 Lyrm9 (ENSDORG00000027328) #13 ENSDORG00000027415 Nos2 (ENSDORG00000000528) #14 ENSDORG00000026862 #15 Ksr1 (ENSDORG00000012665) #16 Wsb1 (ENSDORG00000007448) #18 Omg (ENSDORG00000026854) #20 Evi2b (ENSDORG00000011472) Evi2a (ENSDORG00000026168) Nf1 (ENSDORG00000011467) #21 Rab11fip4 (ENSDORG00000011807) #22 Utp6 (ENSDORG00000003843) #23 Suz12 (ENSDORG00000000460) #24 Crlf3 (ENSDORG00000015909) ##25 Atad5 (ENSDORG00000000344) #25 Tefm (ENSDORG00000000352) Adap2 (ENSDORG00000006678) #26 ENSDORG00000025558 #27 Rhot1 (ENSDORG00000001407) #28 Rhbdl3 (ENSDORG00000024743) #29 5730455P16Rik (ENSDORG00000007133) #30 Zfp207 (ENSDORG00000007139) Psmd11 (ENSDORG00000011438) #32 Cdk5r1 (ENSDORG00000011445) #33 Myo1d (ENSDORG00000011446) #34 Tmem98 (ENSDORG00000026828) #35 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Sciuridae ANCESTRAL SPECIES 4 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363.f #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Marmotini ANCESTRAL SPECIES 39 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363.f #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT01000000215472 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 Marmotini_b ANCESTRAL SPECIES 34 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363.f #11 ENSGT00390000002625 #13 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057.q ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 Arctic ground squirrel MODERN SPECIES 63 POLDIP2 (ENSUPAG00010022381) #7 TNFAIP1 (ENSUPAG00010022382) #8 IFT20 (ENSUPAG00010022384) #9 ENSUPAG00010022386 #10 NLK (ENSUPAG00010022389) #11 LYRM9 (ENSUPAG00010022395) #13 ENSUPAG00010022396 NOS2 (ENSUPAG00010022398) #14 ENSUPAG00010022405 #15 KSR1 (ENSUPAG00010022413) #16 WSB1 (ENSUPAG00010022420) #18 NF1 (ENSUPAG00010022435) #21 OMG (ENSUPAG00010022479) #20 EVI2B (ENSUPAG00010022480) EVI2A (ENSUPAG00010022481) RAB11FIP4 (ENSUPAG00010022484) #22 ENSUPAG00010022485 COPRS (ENSUPAG00010022492) ENSUPAG00010022494 #23 SUZ12 (ENSUPAG00010022503) #24 CRLF3 (ENSUPAG00010022508) ##25 ATAD5 (ENSUPAG00010022514) #25 TEFM (ENSUPAG00010022537) ADAP2 (ENSUPAG00010022538) #26 RNF135 (ENSUPAG00010022541) #27 RHOT1 (ENSUPAG00010022548) #28 RHBDL3 (ENSUPAG00010023045) #29 C17orf75 (ENSUPAG00010023047) #30 ZNF207 (ENSUPAG00010023051) PSMD11 (ENSUPAG00010023057) #32 CDK5R1 (ENSUPAG00010023059) #33 Squirrel MODERN SPECIES 138 TMEM199 (ENSSTOG00000007600) POLDIP2 (ENSSTOG00000007580) #7 TNFAIP1 (ENSSTOG00000007567) #8 ENSSTOG00000007554 #9 TMEM97 (ENSSTOG00000007542) #10 ENSSTOG00000020317 NLK (ENSSTOG00000007526) #11 LYRM9 (ENSSTOG00000027455) #13 NOS2 (ENSSTOG00000029171) #14 ENSSTOG00000016157 #15 KSR1 (ENSSTOG00000021257) #16 WSB1 (ENSSTOG00000014704) #18 OMG (ENSSTOG00000005562) #20 EVI2B (ENSSTOG00000026274) NF1 (ENSSTOG00000034066) #21 RAB11FIP4 (ENSSTOG00000010883) #22 COPRS (ENSSTOG00000025397) UTP6 (ENSSTOG00000015875) #23 SUZ12 (ENSSTOG00000022754) #24 CRLF3 (ENSSTOG00000012342) ##25 ATAD5 (ENSSTOG00000025411) #25 TEFM (ENSSTOG00000012367) ADAP2 (ENSSTOG00000025811) #26 RNF135 (ENSSTOG00000027338) #27 RHOT1 (ENSSTOG00000011738) #28 RHBDL3 (ENSSTOG00000000698) #29 C17orf75 (ENSSTOG00000000705) #30 ENSSTOG00000000712 PSMD11 (ENSSTOG00000009686) #32 CDK5R1 (ENSSTOG00000009703) #33 MYO1D (ENSSTOG00000000438) #34 Alpin marmot MODERN SPECIES 71 TNFAIP1 (ENSMMMG00000012330) #8 IFT20 (ENSMMMG00000012345) #9 TMEM97 (ENSMMMG00000012352) #10 NLK (ENSMMMG00000012357) #11 LYRM9 (ENSMMMG00000012385) #13 ENSMMMG00000012388 NOS2 (ENSMMMG00000012395) #14 ENSMMMG00000012443 #15 KSR1 (ENSMMMG00000012475) #16 WSB1 (ENSMMMG00000012581) #18 NF1 (ENSMMMG00000012603) #21 OMG (ENSMMMG00000012763) #20 EVI2B (ENSMMMG00000012769) EVI2A (ENSMMMG00000012771) ENSMMMG00000012772 RAB11FIP4 (ENSMMMG00000012781) #22 ENSMMMG00000012799 COPRS (ENSMMMG00000012825) UTP6 (ENSMMMG00000012830) #23 SUZ12 (ENSMMMG00000012866) #24 CRLF3 (ENSMMMG00000012930) ##25 TEFM (ENSMMMG00000012960) ADAP2 (ENSMMMG00000012962) #26 RNF135 (ENSMMMG00000012984) #27 RHOT1 (ENSMMMG00000013006) #28 RHBDL3 (ENSMMMG00000013354) #29 C17orf75 (ENSMMMG00000013368) #30 ZNF207 (ENSMMMG00000013387) PSMD11 (ENSMMMG00000013441) #32 CDK5R1 (ENSMMMG00000013447) #33 MYO1D (ENSMMMG00000013449) #34 Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005023054 #9 TMEM97 (ENSSVLG00005023248) #10 ENSSVLG00005023284 #11 LYRM9 (ENSSVLG00005023321) #13 ENSSVLG00005010693 NOS2 (ENSSVLG00005010879) #14 ENSSVLG00005012114 #15 KSR1 (ENSSVLG00005012302) #16 WSB1 (ENSSVLG00005012846) #18 ENSSVLG00005013027 NF1 (ENSSVLG00005013860) #21 ENSSVLG00005015232 OMG (ENSSVLG00005015267) #20 EVI2B (ENSSVLG00005015286) EVI2A (ENSSVLG00005015311) RAB11FIP4 (ENSSVLG00005015383) #22 COPRS (ENSSVLG00005015650) UTP6 (ENSSVLG00005015715) #23 SUZ12 (ENSSVLG00005015781) #24 CRLF3 (ENSSVLG00005016089) ##25 ATAD5 (ENSSVLG00005016127) #25 TEFM (ENSSVLG00005016323) ADAP2 (ENSSVLG00005016368) #26 RNF135 (ENSSVLG00005016571) #27 RHOT1 (ENSSVLG00005016781) #28 RHBDL3 (ENSSVLG00005016946) #29 C17orf75 (ENSSVLG00005017088) #30 ZNF207 (ENSSVLG00005017171) ENSSVLG00005017498 #32 CDK5R1 (ENSSVLG00005017534) #33 MYO1D (ENSSVLG00005017566) #34 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00390000014591 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413.o.a #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000014591 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413.o.a #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000014591 ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413.o.a #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00390000002625 #13 ENSGT00940000159752 #14 ENSGT00940000162258 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00390000008812.b.b #33 ENSGT00940000157411 #34 Long-tailed chinchilla MODERN SPECIES 188 TMEM199 (ENSCLAG00000010426) POLDIP2 (ENSCLAG00000010645) #7 TNFAIP1 (ENSCLAG00000010409) #8 IFT20 (ENSCLAG00000011729) #9 TMEM97 (ENSCLAG00000012393) #10 NLK (ENSCLAG00000004514) #11 LYRM9 (ENSCLAG00000005502) #13 NOS2 (ENSCLAG00000006015) #14 ENSCLAG00000004551 KSR1 (ENSCLAG00000005922) #16 WSB1 (ENSCLAG00000015275) #18 NF1 (ENSCLAG00000007006) #21 OMG (ENSCLAG00000012747) #20 EVI2B (ENSCLAG00000017819) EVI2A (ENSCLAG00000013303) RAB11FIP4 (ENSCLAG00000012724) #22 COPRS (ENSCLAG00000013385) UTP6 (ENSCLAG00000007274) #23 SUZ12 (ENSCLAG00000008281) #24 CRLF3 (ENSCLAG00000009651) ##25 ATAD5 (ENSCLAG00000009928) #25 TEFM (ENSCLAG00000006597) ADAP2 (ENSCLAG00000005862) #26 ENSCLAG00000007154 #27 RHOT1 (ENSCLAG00000007856) #28 RHBDL3 (ENSCLAG00000008877) #29 C17orf75 (ENSCLAG00000007683) #30 ZNF207 (ENSCLAG00000006441) PSMD11 (ENSCLAG00000009489) #32 CDK5R1 (ENSCLAG00000017838) #33 MYO1D (ENSCLAG00000009101) #34 Degu MODERN SPECIES 113 ENSODEG00000015253 #9 TMEM97 (ENSODEG00000016145) #10 NLK (ENSODEG00000012925) #11 ENSODEG00000010997 LYRM9 (ENSODEG00000013678) #13 NOS2 (ENSODEG00000011139) #14 ENSODEG00000011531 ENSODEG00000010909 ENSODEG00000010969 #16 ENSODEG00000011692 #16 ENSODEG00000019866 ENSODEG00000011722 #18 NF1 (ENSODEG00000011949) #21 OMG (ENSODEG00000011985) #20 EVI2B (ENSODEG00000013035) RAB11FIP4 (ENSODEG00000015676) #22 ENSODEG00000012209 COPRS (ENSODEG00000011871) UTP6 (ENSODEG00000011971) #23 SUZ12 (ENSODEG00000013459) #24 ENSODEG00000013349 ##25 ATAD5 (ENSODEG00000014008) #25 ADAP2 (ENSODEG00000011944) #26 ENSODEG00000013107 #27 RHOT1 (ENSODEG00000012674) #28 RHBDL3 (ENSODEG00000012800) #29 C17orf75 (ENSODEG00000012638) #30 ZNF207 (ENSODEG00000012683) ENSODEG00000013615 #32 ENSODEG00000014487 #32 CDK5R1 (ENSODEG00000020159) #33 Guinea pig MODERN SPECIES 32 MED31 (ENSCPOG00000040047) TXNDC17 (ENSCPOG00000002887) KIAA0753 (ENSCPOG00000002880) PITPNM3 (ENSCPOG00000008431) ENSCPOG00000037073 AIPL1 (ENSCPOG00000039044) WSCD1 (ENSCPOG00000005766) ENSCPOG00000032418 ENSCPOG00000005434 ENSCPOG00000038411 ENSCPOG00000032951 ENSCPOG00000020619 ENSCPOG00000040170 OR4K2 (ENSCPOG00000030333) OR4Q3 (ENSCPOG00000020338) RAB11FIP4 (ENSCPOG00000011634) #22 COPRS (ENSCPOG00000006018) UTP6 (ENSCPOG00000014294) #23 ENSCPOG00000034287 SUZ12 (ENSCPOG00000024628) #24 CRLF3 (ENSCPOG00000008693) ##25 ATAD5 (ENSCPOG00000011900) #25 TEFM (ENSCPOG00000011909) ADAP2 (ENSCPOG00000004369) #26 RNF135 (ENSCPOG00000004880) #27 RHOT1 (ENSCPOG00000007927) #28 RHBDL3 (ENSCPOG00000022880) #29 C17orf75 (ENSCPOG00000013162) #30 ZNF207 (ENSCPOG00000001728) PSMD11 (ENSCPOG00000009798) #32 CDK5R1 (ENSCPOG00000020676) #33 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 12 RASL10B (ENSHGLG00000038176) ENSHGLG00000005151 ENSHGLG00000036876 ENSHGLG00000040978 ENSHGLG00000005292 ENSHGLG00000005395 ENSHGLG00000047538 ENSHGLG00000036900 ENSHGLG00000050713 CCL15 (ENSHGLG00000006092) ENSHGLG00000006414 ENSHGLG00000036724 ENSHGLG00000007508 #21 OMG (ENSHGLG00000038199) #20 EVI2B (ENSHGLG00000043351) ENSHGLG00000009194 #22 COPRS (ENSHGLG00000009550) ENSHGLG00000010332 #23 ENSHGLG00000010885 #24 ENSHGLG00000001028 ##25 ENSHGLG00000032665 ENSHGLG00000049891 ENSHGLG00000007169 ENSHGLG00000045706 ENSHGLG00000004768 ENSHGLG00000020187 ENSHGLG00000009236 ENSHGLG00000008400 #18 ENSHGLG00000010179 #16 ENSHGLG00000018127 ENSHGLG00000041137 Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000039573 ENSHGLG00000011573 ENSHGLG00000012521 ENSHGLG00000046512 ADNP2 (ENSHGLG00000033188) ENSHGLG00000042552 ENSHGLG00000032332 ENSHGLG00000038675 ENSHGLG00000037787 ENSHGLG00000034431 ENSHGLG00000035275 ENSHGLG00000038818 ENSHGLG00000036820 ENSHGLG00000003620 ENSHGLG00000038559 ENSHGLG00000050969 #22 ENSHGLG00000013763 S100A4 (ENSHGLG00000016459) S100A3 (ENSHGLG00000033057) ENSHGLG00000009571 S100A14 (ENSHGLG00000008860) S100A1 (ENSHGLG00000044434) CHTOP (ENSHGLG00000010389) ENSHGLG00000042410 SNAPIN (ENSHGLG00000043471) ILF2 (ENSHGLG00000004134) NPR1 (ENSHGLG00000009046) ENSHGLG00000041750 INTS3 (ENSHGLG00000008354) ENSHGLG00000006919 ENSHGLG00000039078 Lagomorpha ANCESTRAL SPECIES ENSGT00940000153571.a #7 ENSGT00950000183143.d #8 ENSGT00390000003413 #9 ENSGT00390000007149 #10 ENSGT00940000158363 #11 ENSGT00960000190753 ENSGT00920000150741 ENSGT00940000159752 #14 ENSGT00940000162701 #15 ENSGT00940000156066 #16 ENSGT00890000139406.a #18 ENSGT00550000074797.b #21 ENSGT00940000160802 #20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #22 ENSGT00390000007384 ENSGT00390000016493 #23 ENSGT00390000012364 #24 ENSGT00940000153469.a.b ##25 ENSGT00940000153469.a.a #25 ENSGT00390000010581 ENSGT00940000156498 #26 ENSGT00830000128449 #27 ENSGT00940000155641 #28 ENSGT00940000158838 #29 ENSGT00390000005481 #30 ENSGT00730000111057 ENSGT00530000063301.a.a #32 ENSGT00940000157411 #34 ENSGT00390000012062 #35 Pika MODERN SPECIES 8052 RAB11FIP4 (ENSOPRG00000015580) #22 Rabbit MODERN SPECIES 10 POLDIP2 (ENSOCUG00000007781) #7 TNFAIP1 (ENSOCUG00000007774) #8 IFT20 (ENSOCUG00000007773) #9 TMEM97 (ENSOCUG00000007769) #10 NLK (ENSOCUG00000007764) #11 ENSOCUG00000026676 ENSOCUG00000032921 NOS2 (ENSOCUG00000001903) #14 ENSOCUG00000025803 #15 KSR1 (ENSOCUG00000007048) #16 WSB1 (ENSOCUG00000004643) #18 NF1 (ENSOCUG00000008567) #21 OMG (ENSOCUG00000008593) #20 EVI2B (ENSOCUG00000008595) EVI2A (ENSOCUG00000008603) RAB11FIP4 (ENSOCUG00000007443) #22 COPRS (ENSOCUG00000015488) UTP6 (ENSOCUG00000016980) #23 SUZ12 (ENSOCUG00000002536) #24 CRLF3 (ENSOCUG00000002764) ##25 ATAD5 (ENSOCUG00000015229) #25 TEFM (ENSOCUG00000015262) ADAP2 (ENSOCUG00000015269) #26 ENSOCUG00000008741 #27 RHOT1 (ENSOCUG00000012506) #28 RHBDL3 (ENSOCUG00000008179) #29 C17orf75 (ENSOCUG00000008187) #30 ZNF207 (ENSOCUG00000008195) PSMD11 (ENSOCUG00000008495) #32 MYO1D (ENSOCUG00000008513) #34 TMEM98 (ENSOCUG00000009595) #35 Tree shrew MODERN SPECIES 1382 ENSTBEG00000003471 #22