Glires	ANCESTRAL SPECIES	3	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT01000000215472	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00960000190753 #12	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Rabbit	MODERN SPECIES	10	POLDIP2 (ENSOCUG00000007781) #7	TNFAIP1 (ENSOCUG00000007774) #8	IFT20 (ENSOCUG00000007773) #9	TMEM97 (ENSOCUG00000007769) #10	NLK (ENSOCUG00000007764) #11	ENSOCUG00000026676 #12	ENSOCUG00000032921 #13	NOS2 (ENSOCUG00000001903) #14	ENSOCUG00000025803 #15	KSR1 (ENSOCUG00000007048) #16	WSB1 (ENSOCUG00000004643) #17	NF1 (ENSOCUG00000008567) #18	OMG (ENSOCUG00000008593) #19	EVI2B (ENSOCUG00000008595) #20	EVI2A (ENSOCUG00000008603) #21	RAB11FIP4 (ENSOCUG00000007443) #22	COPRS (ENSOCUG00000015488) #23	UTP6 (ENSOCUG00000016980) #24	SUZ12 (ENSOCUG00000002536) #25	CRLF3 (ENSOCUG00000002764) #26	ATAD5 (ENSOCUG00000015229) #27	TEFM (ENSOCUG00000015262) #28	ADAP2 (ENSOCUG00000015269) #29	ENSOCUG00000008741 #30	RHOT1 (ENSOCUG00000012506) #31	RHBDL3 (ENSOCUG00000008179) #32	C17orf75 (ENSOCUG00000008187) #33	ZNF207 (ENSOCUG00000008195) #34	PSMD11 (ENSOCUG00000008495) #35	MYO1D (ENSOCUG00000008513) #36	TMEM98 (ENSOCUG00000009595) #37
Pika	MODERN SPECIES	8052																RAB11FIP4 (ENSOPRG00000015580) #22
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT01000000215472	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Myomorpha	ANCESTRAL SPECIES		ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Muroidea	ANCESTRAL SPECIES		ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Northern American deer mouse	MODERN SPECIES	21	Ift20 (ENSPEMG00000005158) #9	Tmem97 (ENSPEMG00000029890) #10	Nlk (ENSPEMG00000028887) #11	Ccnq (ENSPEMG00000008814)	Lyrm9 (ENSPEMG00000010700)	ENSPEMG00000026563 #13	Nos2 (ENSPEMG00000004104) #14	Lgals9 (ENSPEMG00000017761)	Ksr1 (ENSPEMG00000013255) #16	Wsb1 (ENSPEMG00000016763) #17	Nf1 (ENSPEMG00000015586) #18	ENSPEMG00000027432	Omg (ENSPEMG00000012789) #19	Evi2b (ENSPEMG00000011425) #20	Evi2a (ENSPEMG00000009997) #21	Rab11fip4 (ENSPEMG00000017840) #22	Utp6 (ENSPEMG00000014081) #24	Suz12 (ENSPEMG00000019235) #25	Crlf3 (ENSPEMG00000018811) #26	Atad5 (ENSPEMG00000012850) #27	Tefm (ENSPEMG00000016212) #28	Adap2 (ENSPEMG00000002187) #29	ENSPEMG00000018511 #30	Rhot1 (ENSPEMG00000015998) #31	Rhbdl3 (ENSPEMG00000017609) #32	5730455P16Rik (ENSPEMG00000007661) #33	ENSPEMG00000031231	Zfp207 (ENSPEMG00000009110) #34	Psmd11 (ENSPEMG00000015029) #35	Cdk5r1 (ENSPEMG00000004672)	Myo1d (ENSPEMG00000021437) #36
Prairie vole	MODERN SPECIES	15	Tmem97 (ENSMOCG00000022041) #10	ENSMOCG00000001900	Nlk (ENSMOCG00000015184) #11	Ccnq (ENSMOCG00000002415)	Lyrm9 (ENSMOCG00000019807)	Nos2 (ENSMOCG00000010402) #14	Lgals9 (ENSMOCG00000022162)	Ksr1 (ENSMOCG00000007995) #16	ENSMOCG00000021867 #17	ENSMOCG00000008178 #17	ENSMOCG00000005083 #17	Omg (ENSMOCG00000008768) #19	Evi2b (ENSMOCG00000017970) #20	Evi2a (ENSMOCG00000003867) #21	Nf1 (ENSMOCG00000013672) #18	Rab11fip4 (ENSMOCG00000016866) #22	Utp6 (ENSMOCG00000014163) #24	Suz12 (ENSMOCG00000019023) #25	Crlf3 (ENSMOCG00000012869) #26	Atad5 (ENSMOCG00000003812) #27	Tefm (ENSMOCG00000000789) #28	Adap2 (ENSMOCG00000012833) #29	ENSMOCG00000008236 #30	Rhot1 (ENSMOCG00000018397) #31	Rhbdl3 (ENSMOCG00000018973) #32	5730455P16Rik (ENSMOCG00000020781) #33	Zfp207 (ENSMOCG00000017262) #34	ENSMOCG00000010820 #35	ENSMOCG00000012529 #35	Cdk5r1 (ENSMOCG00000001690)	Myo1d (ENSMOCG00000018702) #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Golden Hamster	MODERN SPECIES	684	Poldip2 (ENSMAUG00000018090) #7	Tnfaip1 (ENSMAUG00000010529) #8	Ift20 (ENSMAUG00000017928) #9	Tmem97 (ENSMAUG00000016114) #10	Nlk (ENSMAUG00000017286) #11	Ccnq (ENSMAUG00000009944)	Lyrm9 (ENSMAUG00000011080)	Nos2 (ENSMAUG00000016350) #14	Lgals9 (ENSMAUG00000010512)	Ksr1 (ENSMAUG00000007581) #16	Wsb1 (ENSMAUG00000003418) #17	Omg (ENSMAUG00000000920) #19	Evi2b (ENSMAUG00000021786) #20	Evi2a (ENSMAUG00000011179) #21	Nf1 (ENSMAUG00000021534) #18	Rab11fip4 (ENSMAUG00000012204) #22	Utp6 (ENSMAUG00000021895) #24	Suz12 (ENSMAUG00000001677) #25	Crlf3 (ENSMAUG00000001238) #26	Atad5 (ENSMAUG00000019548) #27	Tefm (ENSMAUG00000006565) #28	Adap2 (ENSMAUG00000001797) #29	ENSMAUG00000022173 #30	Rhot1 (ENSMAUG00000021776) #31	Rhbdl3 (ENSMAUG00000020013) #32	5730455P16Rik (ENSMAUG00000007002) #33	Zfp207 (ENSMAUG00000008892) #34	Psmd11 (ENSMAUG00000019073) #35	Cdk5r1 (ENSMAUG00000021140)	ENSMAUG00000009545	Myo1d (ENSMAUG00000013009) #36
Chinese hamster chok1gshd	MODERN SPECIES	374											ENSCGRG00001004794	Omg (ENSCGRG00001003552) #19	Evi2b (ENSCGRG00001002438) #20	Evi2a (ENSCGRG00001001421) #21	Nf1 (ENSCGRG00001015811) #18	Rab11fip4 (ENSCGRG00001011772) #22	Utp6 (ENSCGRG00001000046) #24	Suz12 (ENSCGRG00001012460) #25	ENSCGRG00001008689 #26	Atad5 (ENSCGRG00001015531) #27	Tefm (ENSCGRG00001014415) #28	Adap2 (ENSCGRG00001013794) #29	ENSCGRG00001013219 #30	Rhot1 (ENSCGRG00001018128) #31	Rhbdl3 (ENSCGRG00001011616) #32	5730455P16Rik (ENSCGRG00001011069) #33	Zfp207 (ENSCGRG00001018133) #34	Psmd11 (ENSCGRG00001014740) #35	Cdk5r1 (ENSCGRG00001014057)	Myo1d (ENSCGRG00001020403) #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00940000164538	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Mus	ANCESTRAL SPECIES	2	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00940000164538	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Mus_A	ANCESTRAL SPECIES	2	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00940000164538	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a.q #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00940000164538	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a.q #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
Mouse	MODERN SPECIES	2	Poldip2 (ENSMUSG00000001100) #7	Tnfaip1 (ENSMUSG00000017615) #8	Ift20 (ENSMUSG00000001105) #9	Tmem97 (ENSMUSG00000037278) #10	Nlk (ENSMUSG00000017376) #11	Ccnq (ENSMUSG00000049489)	Lyrm9 (ENSMUSG00000072640)	Nos2 (ENSMUSG00000020826) #14	Lgals9 (ENSMUSG00000001123)	Ksr1 (ENSMUSG00000018334) #16	Wsb1 (ENSMUSG00000017677) #17	Nf1 (ENSMUSG00000020716) #18	Omg (ENSMUSG00000049612) #19	Evi2b (ENSMUSG00000093938) #20	Evi2a (ENSMUSG00000078771) #21	Rab11fip4 (ENSMUSG00000017639) #22	Utp6 (ENSMUSG00000035575) #24	Suz12 (ENSMUSG00000017548) #25	Crlf3 (ENSMUSG00000017561) #26	Atad5 (ENSMUSG00000017550) #27	Tefm (ENSMUSG00000046909) #28	Adap2 (ENSMUSG00000020709) #29	Rnf135 (ENSMUSG00000020707)	Rhot1 (ENSMUSG00000017686) #31	Rhbdl3 (ENSMUSG00000017692) #32	5730455P16Rik (ENSMUSG00000057181) #33	Zfp207 (ENSMUSG00000017421) #34	Psmd11 (ENSMUSG00000017428) #35	Cdk5r1 (ENSMUSG00000048895)	Myo1d (ENSMUSG00000035441) #36	Tmem98 (ENSMUSG00000035413) #37
Mus_C	ANCESTRAL SPECIES	3	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00940000155445	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00550000074797.b #18	ENSGT00440000033742.a.b #22	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00940000164538	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a.q #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36	ENSGT00390000012062 #37
spretus	MODERN SPECIES	2	Ift20 (MGP_SPRETEiJ_G0017656) #9	Tmem97 (MGP_SPRETEiJ_G0017657) #10	Nlk (MGP_SPRETEiJ_G0017658) #11	Ccnq (MGP_SPRETEiJ_G0017659)	Lyrm9 (MGP_SPRETEiJ_G0017660)	Nos2 (MGP_SPRETEiJ_G0017661) #14	Lgals9 (MGP_SPRETEiJ_G0017662)	Ksr1 (MGP_SPRETEiJ_G0017663) #16	Wsb1 (MGP_SPRETEiJ_G0017664) #17	MGP_SPRETEiJ_G0017665	Nf1 (MGP_SPRETEiJ_G0017666) #18	Omg (MGP_SPRETEiJ_G0017667) #19	MGP_SPRETEiJ_G0017668 #20	MGP_SPRETEiJ_G0017669 #20	Evi2a (MGP_SPRETEiJ_G0017670) #21	Rab11fip4 (MGP_SPRETEiJ_G0017671) #22	Utp6 (MGP_SPRETEiJ_G0017672) #24	Suz12 (MGP_SPRETEiJ_G0017673) #25	Crlf3 (MGP_SPRETEiJ_G0017674) #26	Atad5 (MGP_SPRETEiJ_G0017675) #27	Tefm (MGP_SPRETEiJ_G0017676) #28	Adap2 (MGP_SPRETEiJ_G0017677) #29	Rnf135 (MGP_SPRETEiJ_G0017678)	Rhot1 (MGP_SPRETEiJ_G0017679) #31	Rhbdl3 (MGP_SPRETEiJ_G0017680) #32	5730455P16Rik (MGP_SPRETEiJ_G0017681) #33	Zfp207 (MGP_SPRETEiJ_G0017682) #34	Psmd11 (MGP_SPRETEiJ_G0017683) #35	Cdk5r1 (MGP_SPRETEiJ_G0017684)	Myo1d (MGP_SPRETEiJ_G0017685) #36	Tmem98 (MGP_SPRETEiJ_G0017686) #37
Steppe mouse	MODERN SPECIES	3351	ENSMSIG00000009862	Nlk (ENSMSIG00000009822) #11	ENSMSIG00000009812	Ccnq (ENSMSIG00000009802)	Lyrm9 (ENSMSIG00000009770)	ENSMSIG00000009763 #13	Nos2 (ENSMSIG00000009679) #14	ENSMSIG00000009585	Ksr1 (ENSMSIG00000009362) #16	Wsb1 (ENSMSIG00000009309) #17	ENSMSIG00000009302	Omg (ENSMSIG00000009281) #19	Evi2b (ENSMSIG00000009267) #20	Evi2a (ENSMSIG00000009262) #21	Nf1 (ENSMSIG00000008704) #18	Rab11fip4 (ENSMSIG00000008628) #22	ENSMSIG00000008597	Utp6 (ENSMSIG00000008510) #24	Suz12 (ENSMSIG00000008361) #25	Crlf3 (ENSMSIG00000008282) #26	Atad5 (ENSMSIG00000008129) #27	Tefm (ENSMSIG00000008088) #28	Adap2 (ENSMSIG00000008061) #29	Rnf135 (ENSMSIG00000008044)	Rhot1 (ENSMSIG00000007800) #31	Rhbdl3 (ENSMSIG00000007754) #32	5730455P16Rik (ENSMSIG00000007744) #33	Zfp207 (ENSMSIG00000007459) #34	Psmd11 (ENSMSIG00000007357) #35	Cdk5r1 (ENSMSIG00000007341)	ENSMSIG00000007320
Ryukyu mouse	MODERN SPECIES	2	Tnfaip1 (MGP_CAROLIEiJ_G0016812) #8	Ift20 (MGP_CAROLIEiJ_G0016813) #9	MGP_CAROLIEiJ_G0016814 #10	Nlk (MGP_CAROLIEiJ_G0016815) #11	Ccnq (MGP_CAROLIEiJ_G0016816)	MGP_CAROLIEiJ_G0016817	Nos2 (MGP_CAROLIEiJ_G0016818) #14	Lgals9 (MGP_CAROLIEiJ_G0016819)	Ksr1 (MGP_CAROLIEiJ_G0016820) #16	Wsb1 (MGP_CAROLIEiJ_G0016821) #17	Nf1 (MGP_CAROLIEiJ_G0016822) #18	Omg (MGP_CAROLIEiJ_G0016823) #19	MGP_CAROLIEiJ_G0016824 #20	MGP_CAROLIEiJ_G0016825 #20	Evi2a (MGP_CAROLIEiJ_G0016826) #21	Rab11fip4 (MGP_CAROLIEiJ_G0016827) #22	Utp6 (MGP_CAROLIEiJ_G0016828) #24	Suz12 (MGP_CAROLIEiJ_G0016829) #25	Crlf3 (MGP_CAROLIEiJ_G0016830) #26	Atad5 (MGP_CAROLIEiJ_G0016831) #27	Tefm (MGP_CAROLIEiJ_G0016832) #28	Adap2 (MGP_CAROLIEiJ_G0016833) #29	Rnf135 (MGP_CAROLIEiJ_G0016834)	Rhot1 (MGP_CAROLIEiJ_G0016835) #31	Rhbdl3 (MGP_CAROLIEiJ_G0016836) #32	5730455P16Rik (MGP_CAROLIEiJ_G0016837) #33	Zfp207 (MGP_CAROLIEiJ_G0016838) #34	Psmd11 (MGP_CAROLIEiJ_G0016839) #35	Cdk5r1 (MGP_CAROLIEiJ_G0016840)	Myo1d (MGP_CAROLIEiJ_G0016841) #36	Tmem98 (MGP_CAROLIEiJ_G0016842) #37
Shrew mouse	MODERN SPECIES	5	Tnfaip1 (MGP_PahariEiJ_G0017949) #8	Ift20 (MGP_PahariEiJ_G0017950) #9	MGP_PahariEiJ_G0017951 #10	Nlk (MGP_PahariEiJ_G0017952) #11	Ccnq (MGP_PahariEiJ_G0017953)	MGP_PahariEiJ_G0017954	Nos2 (MGP_PahariEiJ_G0017955) #14	Lgals9 (MGP_PahariEiJ_G0017956)	Ksr1 (MGP_PahariEiJ_G0017957) #16	Wsb1 (MGP_PahariEiJ_G0017958) #17	MGP_PahariEiJ_G0017959 #18	Omg (MGP_PahariEiJ_G0017960) #19	MGP_PahariEiJ_G0017961 #20	MGP_PahariEiJ_G0017962 #20	Evi2a (MGP_PahariEiJ_G0017963) #21	Rab11fip4 (MGP_PahariEiJ_G0017964) #22	Utp6 (MGP_PahariEiJ_G0017965) #24	Suz12 (MGP_PahariEiJ_G0017966) #25	Crlf3 (MGP_PahariEiJ_G0017967) #26	Atad5 (MGP_PahariEiJ_G0017968) #27	Tefm (MGP_PahariEiJ_G0017969) #28	Adap2 (MGP_PahariEiJ_G0017970) #29	Rnf135 (MGP_PahariEiJ_G0017971)	Rhot1 (MGP_PahariEiJ_G0017972) #31	MGP_PahariEiJ_G0017973 #32	5730455P16Rik (MGP_PahariEiJ_G0017974) #33	Zfp207 (MGP_PahariEiJ_G0017975) #34	Psmd11 (MGP_PahariEiJ_G0017976) #35	Cdk5r1 (MGP_PahariEiJ_G0017977)	Myo1d (MGP_PahariEiJ_G0017978) #36	Tmem98 (MGP_PahariEiJ_G0017979) #37
Rat	MODERN SPECIES	1	Tnfaip1 (ENSRNOG00000009069) #8	Ift20 (ENSRNOG00000008891) #9	Tmem97 (ENSRNOG00000008704) #11	Ccnq (ENSRNOG00000022582)	Lyrm9 (ENSRNOG00000037204)	Nos2 (ENSRNOG00000057443) #14	Lgals5 (ENSRNOG00000012557)	Lgals9 (ENSRNOG00000012681)	Ksr1 (ENSRNOG00000012818) #16	AABR07030085.1 (ENSRNOG00000023182)	Wsb1 (ENSRNOG00000012929) #17	Nf1 (ENSRNOG00000013780) #18	Omg (ENSRNOG00000014107) #19	Evi2b (ENSRNOG00000014125) #20	Evi2a (ENSRNOG00000022764) #21	Rab11fip4 (ENSRNOG00000014135) #22	ENSRNOG00000069468	Utp6 (ENSRNOG00000014209) #24	LOC120095270 (ENSRNOG00000029115)	ENSRNOG00000069932	Suz12 (ENSRNOG00000058663) #25	Crlf3 (ENSRNOG00000050657) #26	Atad5 (ENSRNOG00000021903) #27	Tefm (ENSRNOG00000004000) #28	Adap2 (ENSRNOG00000037148) #29	Rhot1 (ENSRNOG00000004093) #31	Rhbdl3 (ENSRNOG00000005515) #32	RGD1310429 (ENSRNOG00000000237) #33	Psmd11 (ENSRNOG00000005538) #35	Cdk5r1 (ENSRNOG00000068243)	Myo1d (ENSRNOG00000003276) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1773	Ift20 (ENSNGAG00000009753) #9	Tmem97 (ENSNGAG00000012768) #10	Nlk (ENSNGAG00000015020) #11	Ccnq (ENSNGAG00000014495)	Lyrm9 (ENSNGAG00000020149)	ENSNGAG00000000671	Nos2 (ENSNGAG00000014709) #14	ENSNGAG00000011827 #15	Ksr1 (ENSNGAG00000016123) #16	Wsb1 (ENSNGAG00000020694) #17	Nf1 (ENSNGAG00000004292) #18	ENSNGAG00000017260	Omg (ENSNGAG00000018355) #19	Evi2b (ENSNGAG00000017449) #20	Evi2a (ENSNGAG00000020994) #21	Rab11fip4 (ENSNGAG00000001437) #22	Utp6 (ENSNGAG00000015482) #24	ENSNGAG00000013204	Suz12 (ENSNGAG00000019582) #25	Crlf3 (ENSNGAG00000009802) #26	Atad5 (ENSNGAG00000010738) #27	Tefm (ENSNGAG00000012952) #28	Adap2 (ENSNGAG00000020102) #29	ENSNGAG00000002228 #30
Lesser Egyptian jerboa	MODERN SPECIES	112	Poldip2 (ENSJJAG00000016890) #7	ENSJJAG00000023956 #8	ENSJJAG00000023770 #9	ENSJJAG00000005855 #10	Nlk (ENSJJAG00000023496) #11	Ccnq (ENSJJAG00000014047)	Lyrm9 (ENSJJAG00000018903)	Nos2 (ENSJJAG00000008903) #14	ENSJJAG00000019969 #15	ENSJJAG00000000471 #16	ENSJJAG00000022499 #16	ENSJJAG00000017336 #17	ENSJJAG00000024274 #17	Omg (ENSJJAG00000007985) #19	Nf1 (ENSJJAG00000013929) #18	Rab11fip4 (ENSJJAG00000019657) #22	Utp6 (ENSJJAG00000013572) #24	Suz12 (ENSJJAG00000018934) #25	Atad5 (ENSJJAG00000015228) #27	Adap2 (ENSJJAG00000015864) #29	ENSJJAG00000023784 #30	Rhot1 (ENSJJAG00000010112) #31	Rhbdl3 (ENSJJAG00000010070) #32	ENSJJAG00000023980 #33	ENSJJAG00000017956	Psmd11 (ENSJJAG00000015236) #35	Cdk5r1 (ENSJJAG00000010662)	Myo1d (ENSJJAG00000015684) #36	Tmem98 (ENSJJAG00000017013) #37	Spaca3 (ENSJJAG00000023074)	ENSJJAG00000022033
Kangaroo rat	MODERN SPECIES	350	Poldip2 (ENSDORG00000002565) #7	Tnfaip1 (ENSDORG00000026438) #8	Ift20 (ENSDORG00000002562) #9	Tmem97 (ENSDORG00000026680) #10	Nlk (ENSDORG00000010252) #11	Lyrm9 (ENSDORG00000027328)	ENSDORG00000027415	Nos2 (ENSDORG00000000528) #14	ENSDORG00000026862 #15	Ksr1 (ENSDORG00000012665) #16	Wsb1 (ENSDORG00000007448) #17	Omg (ENSDORG00000026854) #19	Evi2b (ENSDORG00000011472) #20	Evi2a (ENSDORG00000026168) #21	Nf1 (ENSDORG00000011467) #18	Rab11fip4 (ENSDORG00000011807) #22	Utp6 (ENSDORG00000003843) #24	Suz12 (ENSDORG00000000460) #25	Crlf3 (ENSDORG00000015909) #26	Atad5 (ENSDORG00000000344) #27	Tefm (ENSDORG00000000352) #28	Adap2 (ENSDORG00000006678) #29	ENSDORG00000025558 #30	Rhot1 (ENSDORG00000001407) #31	Rhbdl3 (ENSDORG00000024743) #32	5730455P16Rik (ENSDORG00000007133) #33	Zfp207 (ENSDORG00000007139) #34	Psmd11 (ENSDORG00000011438) #35	Cdk5r1 (ENSDORG00000011445)	Myo1d (ENSDORG00000011446) #36	Tmem98 (ENSDORG00000026828) #37
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT01000000215472	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363.f #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT01000000215472	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b
Marmotini	ANCESTRAL SPECIES	39	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363.f #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT01000000215472	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b
Marmotini_b	ANCESTRAL SPECIES	34	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413 #9	ENSGT00390000007149 #10	ENSGT00940000158363.f #11	ENSGT00390000002625	ENSGT00920000150741 #13	ENSGT00940000159752 #14	ENSGT00940000162701 #15	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057.q #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36
Arctic ground squirrel	MODERN SPECIES	63	POLDIP2 (ENSUPAG00010022381) #7	TNFAIP1 (ENSUPAG00010022382) #8	IFT20 (ENSUPAG00010022384) #9	ENSUPAG00010022386 #10	NLK (ENSUPAG00010022389) #11	LYRM9 (ENSUPAG00010022395)	ENSUPAG00010022396 #13	NOS2 (ENSUPAG00010022398) #14	ENSUPAG00010022405 #15	KSR1 (ENSUPAG00010022413) #16	WSB1 (ENSUPAG00010022420) #17	NF1 (ENSUPAG00010022435) #18	OMG (ENSUPAG00010022479) #19	EVI2B (ENSUPAG00010022480) #20	EVI2A (ENSUPAG00010022481) #21	RAB11FIP4 (ENSUPAG00010022484) #22	ENSUPAG00010022485	COPRS (ENSUPAG00010022492) #23	ENSUPAG00010022494 #24	SUZ12 (ENSUPAG00010022503) #25	CRLF3 (ENSUPAG00010022508) #26	ATAD5 (ENSUPAG00010022514) #27	TEFM (ENSUPAG00010022537) #28	ADAP2 (ENSUPAG00010022538) #29	RNF135 (ENSUPAG00010022541) #30	RHOT1 (ENSUPAG00010022548) #31	RHBDL3 (ENSUPAG00010023045) #32	C17orf75 (ENSUPAG00010023047) #33	ZNF207 (ENSUPAG00010023051) #34	PSMD11 (ENSUPAG00010023057) #35	CDK5R1 (ENSUPAG00010023059)
Squirrel	MODERN SPECIES	138	TMEM199 (ENSSTOG00000007600)	POLDIP2 (ENSSTOG00000007580) #7	TNFAIP1 (ENSSTOG00000007567) #8	ENSSTOG00000007554 #9	TMEM97 (ENSSTOG00000007542) #10	ENSSTOG00000020317	NLK (ENSSTOG00000007526) #11	LYRM9 (ENSSTOG00000027455)	NOS2 (ENSSTOG00000029171) #14	ENSSTOG00000016157 #15	KSR1 (ENSSTOG00000021257) #16	WSB1 (ENSSTOG00000014704) #17	OMG (ENSSTOG00000005562) #19	EVI2B (ENSSTOG00000026274) #20	NF1 (ENSSTOG00000034066) #18	RAB11FIP4 (ENSSTOG00000010883) #22	COPRS (ENSSTOG00000025397) #23	UTP6 (ENSSTOG00000015875) #24	SUZ12 (ENSSTOG00000022754) #25	CRLF3 (ENSSTOG00000012342) #26	ATAD5 (ENSSTOG00000025411) #27	TEFM (ENSSTOG00000012367) #28	ADAP2 (ENSSTOG00000025811) #29	RNF135 (ENSSTOG00000027338) #30	RHOT1 (ENSSTOG00000011738) #31	RHBDL3 (ENSSTOG00000000698) #32	C17orf75 (ENSSTOG00000000705) #33	ENSSTOG00000000712 #34	PSMD11 (ENSSTOG00000009686) #35	CDK5R1 (ENSSTOG00000009703)	MYO1D (ENSSTOG00000000438) #36
Alpin marmot	MODERN SPECIES	71	TNFAIP1 (ENSMMMG00000012330) #8	IFT20 (ENSMMMG00000012345) #9	TMEM97 (ENSMMMG00000012352) #10	NLK (ENSMMMG00000012357) #11	LYRM9 (ENSMMMG00000012385)	ENSMMMG00000012388 #13	NOS2 (ENSMMMG00000012395) #14	ENSMMMG00000012443 #15	KSR1 (ENSMMMG00000012475) #16	WSB1 (ENSMMMG00000012581) #17	NF1 (ENSMMMG00000012603) #18	OMG (ENSMMMG00000012763) #19	EVI2B (ENSMMMG00000012769) #20	EVI2A (ENSMMMG00000012771) #21	ENSMMMG00000012772	RAB11FIP4 (ENSMMMG00000012781) #22	ENSMMMG00000012799	COPRS (ENSMMMG00000012825) #23	UTP6 (ENSMMMG00000012830) #24	SUZ12 (ENSMMMG00000012866) #25	CRLF3 (ENSMMMG00000012930) #26	TEFM (ENSMMMG00000012960) #28	ADAP2 (ENSMMMG00000012962) #29	RNF135 (ENSMMMG00000012984) #30	RHOT1 (ENSMMMG00000013006) #31	RHBDL3 (ENSMMMG00000013354) #32	C17orf75 (ENSMMMG00000013368) #33	ZNF207 (ENSMMMG00000013387) #34	PSMD11 (ENSMMMG00000013441) #35	CDK5R1 (ENSMMMG00000013447)	MYO1D (ENSMMMG00000013449) #36
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005023054 #9	TMEM97 (ENSSVLG00005023248) #10	ENSSVLG00005023284 #11	LYRM9 (ENSSVLG00005023321)	ENSSVLG00005010693 #13	NOS2 (ENSSVLG00005010879) #14	ENSSVLG00005012114 #15	KSR1 (ENSSVLG00005012302) #16	WSB1 (ENSSVLG00005012846) #17	ENSSVLG00005013027	NF1 (ENSSVLG00005013860) #18	ENSSVLG00005015232	OMG (ENSSVLG00005015267) #19	EVI2B (ENSSVLG00005015286) #20	EVI2A (ENSSVLG00005015311) #21	RAB11FIP4 (ENSSVLG00005015383) #22	COPRS (ENSSVLG00005015650) #23	UTP6 (ENSSVLG00005015715) #24	SUZ12 (ENSSVLG00005015781) #25	CRLF3 (ENSSVLG00005016089) #26	ATAD5 (ENSSVLG00005016127) #27	TEFM (ENSSVLG00005016323) #28	ADAP2 (ENSSVLG00005016368) #29	RNF135 (ENSSVLG00005016571) #30	RHOT1 (ENSSVLG00005016781) #31	RHBDL3 (ENSSVLG00005016946) #32	C17orf75 (ENSSVLG00005017088) #33	ZNF207 (ENSSVLG00005017171) #34	ENSSVLG00005017498 #35	CDK5R1 (ENSSVLG00005017534)	MYO1D (ENSSVLG00005017566) #36
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00390000014591	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413.o.a #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00390000014591	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413.o.a #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00390000014591	ENSGT00940000153571.a #7	ENSGT00950000183143.d #8	ENSGT00390000003413.o.a #9	ENSGT00390000007149 #10	ENSGT00940000158363 #11	ENSGT00390000002625	ENSGT00940000159752 #14	ENSGT00940000162258	ENSGT00940000156066 #16	ENSGT00890000139406.a #17	ENSGT00550000074797.b #18	ENSGT00940000160802 #19	ENSGT00390000009142 #20	ENSGT00390000003004 #21	ENSGT00440000033742.a.b #22	ENSGT00390000007384 #23	ENSGT00390000016493 #24	ENSGT00390000012364 #25	ENSGT00940000153469.a.b #26	ENSGT00940000153469.a.a #27	ENSGT00390000010581 #28	ENSGT00940000156498 #29	ENSGT00830000128449 #30	ENSGT00940000155641 #31	ENSGT00940000158838 #32	ENSGT00390000005481 #33	ENSGT00730000111057 #34	ENSGT00530000063301.a.a #35	ENSGT00390000008812.b.b	ENSGT00940000157411 #36
Long-tailed chinchilla	MODERN SPECIES	188	TMEM199 (ENSCLAG00000010426)	POLDIP2 (ENSCLAG00000010645) #7	TNFAIP1 (ENSCLAG00000010409) #8	IFT20 (ENSCLAG00000011729) #9	TMEM97 (ENSCLAG00000012393) #10	NLK (ENSCLAG00000004514) #11	LYRM9 (ENSCLAG00000005502)	NOS2 (ENSCLAG00000006015) #14	ENSCLAG00000004551	KSR1 (ENSCLAG00000005922) #16	WSB1 (ENSCLAG00000015275) #17	NF1 (ENSCLAG00000007006) #18	OMG (ENSCLAG00000012747) #19	EVI2B (ENSCLAG00000017819) #20	EVI2A (ENSCLAG00000013303) #21	RAB11FIP4 (ENSCLAG00000012724) #22	COPRS (ENSCLAG00000013385) #23	UTP6 (ENSCLAG00000007274) #24	SUZ12 (ENSCLAG00000008281) #25	CRLF3 (ENSCLAG00000009651) #26	ATAD5 (ENSCLAG00000009928) #27	TEFM (ENSCLAG00000006597) #28	ADAP2 (ENSCLAG00000005862) #29	ENSCLAG00000007154 #30	RHOT1 (ENSCLAG00000007856) #31	RHBDL3 (ENSCLAG00000008877) #32	C17orf75 (ENSCLAG00000007683) #33	ZNF207 (ENSCLAG00000006441) #34	PSMD11 (ENSCLAG00000009489) #35	CDK5R1 (ENSCLAG00000017838)	MYO1D (ENSCLAG00000009101) #36
Degu	MODERN SPECIES	113	ENSODEG00000015253 #9	TMEM97 (ENSODEG00000016145) #10	NLK (ENSODEG00000012925) #11	ENSODEG00000010997	LYRM9 (ENSODEG00000013678)	NOS2 (ENSODEG00000011139) #14	ENSODEG00000011531	ENSODEG00000010909	ENSODEG00000010969 #16	ENSODEG00000011692 #16	ENSODEG00000019866	ENSODEG00000011722 #17	NF1 (ENSODEG00000011949) #18	OMG (ENSODEG00000011985) #19	EVI2B (ENSODEG00000013035) #20	RAB11FIP4 (ENSODEG00000015676) #22	ENSODEG00000012209	COPRS (ENSODEG00000011871) #23	UTP6 (ENSODEG00000011971) #24	SUZ12 (ENSODEG00000013459) #25	ENSODEG00000013349 #26	ATAD5 (ENSODEG00000014008) #27	ADAP2 (ENSODEG00000011944) #29	ENSODEG00000013107 #30	RHOT1 (ENSODEG00000012674) #31	RHBDL3 (ENSODEG00000012800) #32	C17orf75 (ENSODEG00000012638) #33	ZNF207 (ENSODEG00000012683) #34	ENSODEG00000013615 #35	ENSODEG00000014487 #35	CDK5R1 (ENSODEG00000020159)
Guinea pig	MODERN SPECIES	32	MED31 (ENSCPOG00000040047)	TXNDC17 (ENSCPOG00000002887)	KIAA0753 (ENSCPOG00000002880)	PITPNM3 (ENSCPOG00000008431)	ENSCPOG00000037073	AIPL1 (ENSCPOG00000039044)	WSCD1 (ENSCPOG00000005766)	ENSCPOG00000032418	ENSCPOG00000005434	ENSCPOG00000038411	ENSCPOG00000032951	ENSCPOG00000020619	ENSCPOG00000040170	OR4K2 (ENSCPOG00000030333)	OR4Q3 (ENSCPOG00000020338)	RAB11FIP4 (ENSCPOG00000011634) #22	COPRS (ENSCPOG00000006018) #23	UTP6 (ENSCPOG00000014294) #24	ENSCPOG00000034287	SUZ12 (ENSCPOG00000024628) #25	CRLF3 (ENSCPOG00000008693) #26	ATAD5 (ENSCPOG00000011900) #27	TEFM (ENSCPOG00000011909) #28	ADAP2 (ENSCPOG00000004369) #29	RNF135 (ENSCPOG00000004880) #30	RHOT1 (ENSCPOG00000007927) #31	RHBDL3 (ENSCPOG00000022880) #32	C17orf75 (ENSCPOG00000013162) #33	ZNF207 (ENSCPOG00000001728) #34	PSMD11 (ENSCPOG00000009798) #35	CDK5R1 (ENSCPOG00000020676)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	12	RASL10B (ENSHGLG00000038176)	ENSHGLG00000005151	ENSHGLG00000036876	ENSHGLG00000040978	ENSHGLG00000005292	ENSHGLG00000005395	ENSHGLG00000047538	ENSHGLG00000036900	ENSHGLG00000050713	CCL15 (ENSHGLG00000006092)	ENSHGLG00000006414	ENSHGLG00000036724	ENSHGLG00000007508 #18	OMG (ENSHGLG00000038199) #19	EVI2B (ENSHGLG00000043351) #20	ENSHGLG00000009194 #22	COPRS (ENSHGLG00000009550) #23	ENSHGLG00000010332 #24	ENSHGLG00000010885 #25	ENSHGLG00000001028 #26	ENSHGLG00000032665	ENSHGLG00000049891	ENSHGLG00000007169	ENSHGLG00000045706	ENSHGLG00000004768	ENSHGLG00000020187	ENSHGLG00000009236	ENSHGLG00000008400 #17	ENSHGLG00000010179 #16	ENSHGLG00000018127	ENSHGLG00000041137
Naked mole-rat female	MODERN SPECIES	30	ENSHGLG00000039573	ENSHGLG00000011573	ENSHGLG00000012521	ENSHGLG00000046512	ADNP2 (ENSHGLG00000033188)	ENSHGLG00000042552	ENSHGLG00000032332	ENSHGLG00000038675	ENSHGLG00000037787	ENSHGLG00000034431	ENSHGLG00000035275	ENSHGLG00000038818	ENSHGLG00000036820	ENSHGLG00000003620	ENSHGLG00000038559	ENSHGLG00000050969 #22	ENSHGLG00000013763	S100A4 (ENSHGLG00000016459)	S100A3 (ENSHGLG00000033057)	ENSHGLG00000009571	S100A14 (ENSHGLG00000008860)	S100A1 (ENSHGLG00000044434)	CHTOP (ENSHGLG00000010389)	ENSHGLG00000042410	SNAPIN (ENSHGLG00000043471)	ILF2 (ENSHGLG00000004134)	NPR1 (ENSHGLG00000009046)	ENSHGLG00000041750	INTS3 (ENSHGLG00000008354)	ENSHGLG00000006919	ENSHGLG00000039078