Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Primates ANCESTRAL SPECIES 10 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Strepsirrhini ANCESTRAL SPECIES 46 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Lemuriformes ANCESTRAL SPECIES 62 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Lemuriformes_a ANCESTRAL SPECIES 192 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Coquerels sifaka MODERN SPECIES 979 ADGRA3 (ENSPCOG00000026249) #8 ENSPCOG00000013452 #9 PPARGC1A (ENSPCOG00000022858) #10 ENSPCOG00000019130 #11 DHX15 (ENSPCOG00000016858) #12 CCDC149 (ENSPCOG00000021677) #13 LGI2 (ENSPCOG00000019962) #14 SEPSECS (ENSPCOG00000027479) #15 PI4K2B (ENSPCOG00000025453) #16 ZCCHC4 (ENSPCOG00000019530) #17 ANAPC4 (ENSPCOG00000019322) #18 SLC34A2 (ENSPCOG00000001661) #19 SEL1L3 (ENSPCOG00000008204) #20 SMIM20 (ENSPCOG00000020751) #21 RBPJ (ENSPCOG00000014943) #22 CCKAR (ENSPCOG00000022459) #23 TBC1D19 (ENSPCOG00000027578) #24 ENSPCOG00000015580 #25 Greater bamboo lemur MODERN SPECIES 645 SEL1L3 (ENSPSMG00000004418) #20 RBPJ (ENSPSMG00000004547) #22 CCKAR (ENSPSMG00000004592) #23 TBC1D19 (ENSPSMG00000004674) #24 STIM2 (ENSPSMG00000004771) #25 Mouse lemur MODERN SPECIES 26 ADGRA3 (ENSMICG00000003022) #8 GBA3 (ENSMICG00000017466) #9 PPARGC1A (ENSMICG00000015390) #10 ENSMICG00000045337 #11 DHX15 (ENSMICG00000015414) #12 CCDC149 (ENSMICG00000017475) #13 LGI2 (ENSMICG00000002206) #14 SEPSECS (ENSMICG00000028863) #15 PI4K2B (ENSMICG00000017176) #16 ZCCHC4 (ENSMICG00000017179) #17 ANAPC4 (ENSMICG00000017188) #18 ENSMICG00000033125 SLC34A2 (ENSMICG00000045359) #19 SEL1L3 (ENSMICG00000017216) #20 SMIM20 (ENSMICG00000017222) #21 RBPJ (ENSMICG00000016014) #22 CCKAR (ENSMICG00000016023) #23 TBC1D19 (ENSMICG00000015879) #24 STIM2 (ENSMICG00000005093) #25 ENSMICG00000032983 PCDH7 (ENSMICG00000028654) ENSMICG00000029850 ENSMICG00000034379 ENSMICG00000048142 ENSMICG00000030890 ARAP2 (ENSMICG00000016496) DTHD1 (ENSMICG00000016515) ENSMICG00000042181 ENSMICG00000046422 ENSMICG00000037614 NWD2 (ENSMICG00000015234) Bushbaby MODERN SPECIES 184 ENSOGAG00000034271 GBA3 (ENSOGAG00000004907) #9 PPARGC1A (ENSOGAG00000014559) #10 ENSOGAG00000007593 #12 ENSOGAG00000029820 CCDC149 (ENSOGAG00000007602) #13 LGI2 (ENSOGAG00000025923) #14 SEPSECS (ENSOGAG00000008524) #15 ENSOGAG00000033259 ENSOGAG00000024400 PI4K2B (ENSOGAG00000029591) #16 ZCCHC4 (ENSOGAG00000002064) #17 ANAPC4 (ENSOGAG00000002068) #18 SLC34A2 (ENSOGAG00000006413) #19 SEL1L3 (ENSOGAG00000006417) #20 RBPJ (ENSOGAG00000007913) #22 CCKAR (ENSOGAG00000028711) #23 TBC1D19 (ENSOGAG00000008054) #24 STIM2 (ENSOGAG00000001870) #25 Haplorrhini ANCESTRAL SPECIES 23 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Tarsier DUPLICATION Tarsier MODERN SPECIES 7054 ENSTSYG00000027783 #22 MAGI1 (ENSTSYG00000007911) SLC25A26 (ENSTSYG00000032957) LRIG1 (ENSTSYG00000011778) KBTBD8 (ENSTSYG00000000350) ENSTSYG00000002336 Tarsier MODERN SPECIES 3892 RBPJ (ENSTSYG00000001894) #22 CCKAR (ENSTSYG00000028993) #23 Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000158985.c ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 Mas night monkey MODERN SPECIES 1274 PACRGL (ENSANAG00000026655) KCNIP4 (ENSANAG00000020849) ADGRA3 (ENSANAG00000029226) #8 GBA3 (ENSANAG00000033499) #9 PPARGC1A (ENSANAG00000035930) #10 DHX15 (ENSANAG00000020669) #12 CCDC149 (ENSANAG00000029354) #13 LGI2 (ENSANAG00000027724) #14 SEPSECS (ENSANAG00000035197) #15 PI4K2B (ENSANAG00000030238) #16 ZCCHC4 (ENSANAG00000034646) #17 ANAPC4 (ENSANAG00000028966) #18 SLC34A2 (ENSANAG00000020569) #19 SEL1L3 (ENSANAG00000035152) #20 SMIM20 (ENSANAG00000027622) #21 RBPJ (ENSANAG00000028890) #22 CCKAR (ENSANAG00000033444) #23 TBC1D19 (ENSANAG00000034488) #24 STIM2 (ENSANAG00000030101) #25 ENSANAG00000021496 Cebidae ANCESTRAL SPECIES 4 ENSGT00940000158985.c ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 Marmoset MODERN SPECIES 15 ENSCJAG00000083951 PPARGC1A (ENSCJAG00000013024) #10 DHX15 (ENSCJAG00000013069) #12 ENSCJAG00000087251 SOD3 (ENSCJAG00000013121) CCDC149 (ENSCJAG00000013127) #13 LGI2 (ENSCJAG00000042679) #14 SEPSECS (ENSCJAG00000013178) #15 ANAPC4 (ENSCJAG00000013271) #18 ENSCJAG00000084062 SLC34A2 (ENSCJAG00000013366) #19 SEL1L3 (ENSCJAG00000021061) #20 SMIM20 (ENSCJAG00000081638) #21 ENSCJAG00000063163 ENSCJAG00000086596 RBPJ (ENSCJAG00000021033) #22 CCKAR (ENSCJAG00000083281) #23 TBC1D19 (ENSCJAG00000021004) #24 ENSCJAG00000067085 STIM2 (ENSCJAG00000020997) #25 PCDH7 (ENSCJAG00000020994) ENSCJAG00000085279 ENSCJAG00000075802 ENSCJAG00000082827 ENSCJAG00000070181 ENSCJAG00000078636 ARAP2 (ENSCJAG00000020975) DTHD1 (ENSCJAG00000020974) ENSCJAG00000081599 NWD2 (ENSCJAG00000020972) C4orf19 (ENSCJAG00000020970) Cebidae_a ANCESTRAL SPECIES 34 ENSGT00940000158985.c ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 Bolivian squirrel monkey MODERN SPECIES 65 ADGRA3 (ENSSBOG00000006417) #8 GBA3 (ENSSBOG00000032739) #9 PPARGC1A (ENSSBOG00000006423) #10 DHX15 (ENSSBOG00000022126) #12 ENSSBOG00000030054 SOD3 (ENSSBOG00000003134) CCDC149 (ENSSBOG00000034478) #13 LGI2 (ENSSBOG00000033943) #14 SEPSECS (ENSSBOG00000023218) #15 PI4K2B (ENSSBOG00000030108) #16 ZCCHC4 (ENSSBOG00000020855) #17 ANAPC4 (ENSSBOG00000025712) #18 SLC34A2 (ENSSBOG00000023680) #19 SEL1L3 (ENSSBOG00000031484) #20 ENSSBOG00000022950 #21 RBPJ (ENSSBOG00000024531) #22 CCKAR (ENSSBOG00000028673) #23 TBC1D19 (ENSSBOG00000030316) #24 STIM2 (ENSSBOG00000030023) #25 PCDH7 (ENSSBOG00000011267) ENSSBOG00000030688 ARAP2 (ENSSBOG00000023662) DTHD1 (ENSSBOG00000034010) NWD2 (ENSSBOG00000028289) C4orf19 (ENSSBOG00000034925) RELL1 (ENSSBOG00000022983) PGM2 (ENSSBOG00000025985) TBC1D1 (ENSSBOG00000035438) ENSSBOG00000033413 KLF3 (ENSSBOG00000005401) FAM114A1 (ENSSBOG00000025532) Capuchin MODERN SPECIES 333 SEL1L3 (ENSCCAG00000028947) #20 SMIM20 (ENSCCAG00000037080) #21 RBPJ (ENSCCAG00000032952) #22 CCKAR (ENSCCAG00000020355) #23 TBC1D19 (ENSCCAG00000021726) #24 STIM2 (ENSCCAG00000021839) #25 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00860000135660 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00390000009693.m.b Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00390000009693.m.b Vervet Monkey MODERN SPECIES 19 KCNIP4 (ENSCSAG00000016556) ADGRA3 (ENSCSAG00000016562) #8 GBA3 (ENSCSAG00000016567) #9 PPARGC1A (ENSCSAG00000016575) #10 DHX15 (ENSCSAG00000016601) #12 SOD3 (ENSCSAG00000019694) CCDC149 (ENSCSAG00000016607) #13 LGI2 (ENSCSAG00000016614) #14 SEPSECS (ENSCSAG00000016622) #15 PI4K2B (ENSCSAG00000016627) #16 ZCCHC4 (ENSCSAG00000016633) #17 ANAPC4 (ENSCSAG00000016642) #18 SLC34A2 (ENSCSAG00000016651) #19 SEL1L3 (ENSCSAG00000016666) #20 ENSCSAG00000016669 #21 RBPJ (ENSCSAG00000016678) #22 CCKAR (ENSCSAG00000016683) #23 TBC1D19 (ENSCSAG00000016710) #24 ENSCSAG00000016720 STIM2 (ENSCSAG00000016726) #25 ENSCSAG00000016727 PCDH7 (ENSCSAG00000016736) ENSCSAG00000016748 ARAP2 (ENSCSAG00000016819) DTHD1 (ENSCSAG00000016834) NWD2 (ENSCSAG00000016836) C4orf19 (ENSCSAG00000016838) RELL1 (ENSCSAG00000016840) PGM2 (ENSCSAG00000016846) TBC1D1 (ENSCSAG00000016865) KLF3 (ENSCSAG00000016868) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398.i.a #21 ENSGT00390000014814.a.b.a.b.b ENSGT00390000002398.j #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 ENSGT00940000164947 ENSGT00390000014092.k.a ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000170408 Macaca ANCESTRAL SPECIES 25 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398.i.a #21 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ENSGT01030000234945 ENSGT00940000157221 ENSGT00910000147204 ENSGT00910000147191 ENSGT00940000164947 ENSGT00390000014092.k.a ENSGT00940000160197 ENSGT00940000153404.b ENSGT00950000183010.a.a.a.b.a.a.a.a.b.a ENSGT00940000153648.b Pig-tailed macaque MODERN SPECIES 141 GBA3 (ENSMNEG00000038431) #9 PPARGC1A (ENSMNEG00000028682) #10 ENSMNEG00000013564 #11 DHX15 (ENSMNEG00000035145) #12 ENSMNEG00000005920 CCDC149 (ENSMNEG00000034296) #13 LGI2 (ENSMNEG00000015411) #14 SEPSECS (ENSMNEG00000041117) #15 PI4K2B (ENSMNEG00000010678) #16 ZCCHC4 (ENSMNEG00000027221) #17 ANAPC4 (ENSMNEG00000044256) #18 SLC34A2 (ENSMNEG00000033278) #19 SEL1L3 (ENSMNEG00000044018) #20 ENSMNEG00000045287 #21 ENSMNEG00000027453 RBPJ (ENSMNEG00000037915) #22 CCKAR (ENSMNEG00000038424) #23 TBC1D19 (ENSMNEG00000031445) #24 ENSMNEG00000032694 STIM2 (ENSMNEG00000032563) #25 ENSMNEG00000029234 ENSMNEG00000038617 ENSMNEG00000034187 PCDH7 (ENSMNEG00000044686) ENSMNEG00000008266 ENSMNEG00000010411 ENSMNEG00000034911 ENSMNEG00000019076 ARAP2 (ENSMNEG00000033019) DTHD1 (ENSMNEG00000045184) ENSMNEG00000043393 Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.a.b.b.a ENSGT01100000263493.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.a.a.b ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398.i.a #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.a.c.b ENSGT00940000157221 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.b.a.b.b ENSGT00940000164947 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01100000263493.a.b.a.a.a.b.b.b.b.c.a ENSGT01030000235076 Rhesus MODERN SPECIES 15 PPARGC1A (ENSMMUG00000001844) #10 DHX15 (ENSMMUG00000009637) #12 SOD3 (ENSMMUG00000002612) CCDC149 (ENSMMUG00000004785) #13 ENSMMUG00000062929 ENSMMUG00000052018 LGI2 (ENSMMUG00000060440) #14 SEPSECS (ENSMMUG00000019784) #15 PI4K2B (ENSMMUG00000003629) #16 ANAPC4 (ENSMMUG00000004458) #18 ENSMMUG00000053638 ENSMMUG00000049554 SLC34A2 (ENSMMUG00000021135) #19 SEL1L3 (ENSMMUG00000020349) #20 ENSMMUG00000006680 #21 RBPJ (ENSMMUG00000015828) #22 CCKAR (ENSMMUG00000049298) #23 TBC1D19 (ENSMMUG00000019239) #24 STIM2 (ENSMMUG00000009439) #25 ENSMMUG00000055119 ENSMMUG00000060404 PCDH7 (ENSMMUG00000011898) ENSMMUG00000056986 ENSMMUG00000062143 ENSMMUG00000059032 ARAP2 (ENSMMUG00000006871) DTHD1 (ENSMMUG00000006875) NWD2 (ENSMMUG00000003676) C5H4orf19 (ENSMMUG00000009691) RELL1 (ENSMMUG00000017630) PGM2 (ENSMMUG00000000232) Crab-eating macaque MODERN SPECIES 15 SOD3 (ENSMFAG00000020365) ENSMFAG00000055313 CCDC149 (ENSMFAG00000042580) #13 LGI2 (ENSMFAG00000036970) #14 SEPSECS (ENSMFAG00000003516) #15 PI4K2B (ENSMFAG00000033102) #16 ENSMFAG00000056821 ZCCHC4 (ENSMFAG00000033636) #17 ANAPC4 (ENSMFAG00000037891) #18 ENSMFAG00000065080 ENSMFAG00000049099 SLC34A2 (ENSMFAG00000020407) #19 SEL1L3 (ENSMFAG00000002093) #20 SMIM20 (ENSMFAG00000033269) #21 ENSMFAG00000049001 RBPJ (ENSMFAG00000001779) #22 CCKAR (ENSMFAG00000003530) #23 TBC1D19 (ENSMFAG00000000286) #24 STIM2 (ENSMFAG00000034185) #25 ENSMFAG00000056885 ENSMFAG00000036136 PCDH7 (ENSMFAG00000040327) ENSMFAG00000049710 ENSMFAG00000064925 ENSMFAG00000065581 ENSMFAG00000039044 ENSMFAG00000047594 ENSMFAG00000055627 ENSMFAG00000055647 ENSMFAG00000050317 ARAP2 (ENSMFAG00000041357) Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398.j #21 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 ENSGT00940000164947 ENSGT00390000014092.k.a ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000170408 Olive baboon MODERN SPECIES 13 CCDC149 (ENSPANG00000020855) #13 LGI2 (ENSPANG00000016910) #14 ENSPANG00000050688 SEPSECS (ENSPANG00000021177) #15 PI4K2B (ENSPANG00000024999) #16 ENSPANG00000008337 ZCCHC4 (ENSPANG00000013373) #17 ANAPC4 (ENSPANG00000019352) #18 ENSPANG00000037863 ENSPANG00000046005 SLC34A2 (ENSPANG00000043751) #19 ENSPANG00000041131 SEL1L3 (ENSPANG00000000072) #20 SMIM20 (ENSPANG00000032807) #21 ENSPANG00000030947 RBPJ (ENSPANG00000021176) #22 ENSPANG00000050241 CCKAR (ENSPANG00000019759) #23 ENSPANG00000045844 ENSPANG00000037534 TBC1D19 (ENSPANG00000019571) #24 ENSPANG00000033456 STIM2 (ENSPANG00000016909) #25 ENSPANG00000042786 ENSPANG00000040765 ENSPANG00000043923 PCDH7 (ENSPANG00000015663) ENSPANG00000043052 ENSPANG00000008054 ENSPANG00000046206 ARAP2 (ENSPANG00000021175) Cercopithecinae_d ANCESTRAL SPECIES 91 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398.j #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 Drill MODERN SPECIES 1453 RBPJ (ENSMLEG00000031229) #22 CCKAR (ENSMLEG00000030034) #23 TBC1D19 (ENSMLEG00000011583) #24 STIM2 (ENSMLEG00000022797) #25 Sooty mangabey MODERN SPECIES 551 ADGRA3 (ENSCATG00000042545) #8 GBA3 (ENSCATG00000042364) #9 PPARGC1A (ENSCATG00000032575) #10 ENSCATG00000022340 #11 DHX15 (ENSCATG00000000715) #12 SOD3 (ENSCATG00000021168) CCDC149 (ENSCATG00000037847) #13 LGI2 (ENSCATG00000043883) #14 SEPSECS (ENSCATG00000041245) #15 PI4K2B (ENSCATG00000015768) #16 ZCCHC4 (ENSCATG00000028628) #17 ANAPC4 (ENSCATG00000035985) #18 SLC34A2 (ENSCATG00000029842) #19 SEL1L3 (ENSCATG00000038183) #20 ENSCATG00000032458 #21 RBPJ (ENSCATG00000044181) #22 CCKAR (ENSCATG00000038819) #23 TBC1D19 (ENSCATG00000009189) #24 ENSCATG00000039543 STIM2 (ENSCATG00000030868) #25 ENSCATG00000018899 ENSCATG00000044558 PCDH7 (ENSCATG00000039870) ENSCATG00000023352 ENSCATG00000041818 Rhinopithecus ANCESTRAL SPECIES 553 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00390000008128.c.a.b Black snub-nosed monkey MODERN SPECIES 140 SEL1L3 (ENSRBIG00000040589) #20 ENSRBIG00000030320 #21 ENSRBIG00000015089 RBPJ (ENSRBIG00000040340) #22 CCKAR (ENSRBIG00000044006) #23 TBC1D19 (ENSRBIG00000032962) #24 STIM2 (ENSRBIG00000030774) #25 ENSRBIG00000041821 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 538 ENSRROG00000037809 #22 Golden snub-nosed monkey MODERN SPECIES 1367 SEL1L3 (ENSRROG00000006205) #20 SMIM20 (ENSRROG00000035862) #21 ENSRROG00000037997 ENSRROG00000024203 RBPJ (ENSRROG00000008767) #22 CCKAR (ENSRROG00000030028) #23 Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Gibbon MODERN SPECIES 12 ENSNLEG00000027847 GBA3 (ENSNLEG00000016754) #9 PPARGC1A (ENSNLEG00000016760) #10 DHX15 (ENSNLEG00000016767) #12 SOD3 (ENSNLEG00000032570) CCDC149 (ENSNLEG00000016779) #13 LGI2 (ENSNLEG00000016796) #14 SEPSECS (ENSNLEG00000016800) #15 PI4K2B (ENSNLEG00000016814) #16 ZCCHC4 (ENSNLEG00000016824) #17 ANAPC4 (ENSNLEG00000016831) #18 SLC34A2 (ENSNLEG00000016860) #19 SEL1L3 (ENSNLEG00000016867) #20 ENSNLEG00000016894 #21 ENSNLEG00000032692 RBPJ (ENSNLEG00000016895) #22 CCKAR (ENSNLEG00000016913) #23 TBC1D19 (ENSNLEG00000016920) #24 STIM2 (ENSNLEG00000016942) #25 ENSNLEG00000030375 ENSNLEG00000030577 ARAP2 (ENSNLEG00000016967) DTHD1 (ENSNLEG00000016995) NWD2 (ENSNLEG00000016998) C4orf19 (ENSNLEG00000035513) RELL1 (ENSNLEG00000017005) PGM2 (ENSNLEG00000017010) ENSNLEG00000035345 TBC1D1 (ENSNLEG00000017022) KLF3 (ENSNLEG00000017046) TLR10 (ENSNLEG00000017048) Hominidae ANCESTRAL SPECIES 12 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00860000135660 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Orangutan MODERN SPECIES 17 GBA3 (ENSPPYG00000014639) #9 PPARGC1A (ENSPPYG00000014640) #10 DHX15 (ENSPPYG00000014641) #12 ENSPPYG00000036250 SOD3 (ENSPPYG00000014642) CCDC149 (ENSPPYG00000014643) #13 LGI2 (ENSPPYG00000039828) #14 SEPSECS (ENSPPYG00000014645) #15 PI4K2B (ENSPPYG00000014646) #16 ZCCHC4 (ENSPPYG00000014647) #17 ANAPC4 (ENSPPYG00000034769) #18 SLC34A2 (ENSPPYG00000014649) #19 ENSPPYG00000031785 SEL1L3 (ENSPPYG00000014650) #20 SMIM20 (ENSPPYG00000014651) #21 RBPJ (ENSPPYG00000014652) #22 CCKAR (ENSPPYG00000014653) #23 TBC1D19 (ENSPPYG00000014654) #24 STIM2 (ENSPPYG00000014655) #25 PCDH7 (ENSPPYG00000031272) ENSPPYG00000031494 ENSPPYG00000034474 ARAP2 (ENSPPYG00000032983) DTHD1 (ENSPPYG00000037872) NWD2 (ENSPPYG00000030808) C4orf19 (ENSPPYG00000038950) RELL1 (ENSPPYG00000031559) PGM2 (ENSPPYG00000014661) TBC1D1 (ENSPPYG00000014663) KLF3 (ENSPPYG00000014666) TLR10 (ENSPPYG00000014667) Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000157235 #8 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00770000121815 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00940000157235 #8 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00770000121815 Human MODERN SPECIES 16 KCNIP4 (ENSG00000185774) ADGRA3 (ENSG00000152990) #8 GBA3 (ENSG00000249948) #9 PPARGC1A (ENSG00000109819) #10 DHX15 (ENSG00000109606) #12 SOD3 (ENSG00000109610) CCDC149 (ENSG00000181982) #13 LGI2 (ENSG00000153012) #14 SEPSECS (ENSG00000109618) #15 PI4K2B (ENSG00000038210) #16 ZCCHC4 (ENSG00000168228) #17 ANAPC4 (ENSG00000053900) #18 SLC34A2 (ENSG00000157765) #19 SEL1L3 (ENSG00000091490) #20 SMIM20 (ENSG00000250317) #21 RBPJ (ENSG00000168214) #22 CCKAR (ENSG00000163394) #23 TBC1D19 (ENSG00000109680) #24 STIM2 (ENSG00000109689) #25 PCDH7 (ENSG00000169851) ARAP2 (ENSG00000047365) DTHD1 (ENSG00000197057) NWD2 (ENSG00000174145) C4orf19 (ENSG00000154274) RELL1 (ENSG00000181826) PGM2 (ENSG00000169299) TBC1D1 (ENSG00000065882) PTTG2 (ENSG00000250254) KLF3 (ENSG00000109787) TLR10 (ENSG00000174123) TLR1 (ENSG00000174125) Pan ANCESTRAL SPECIES 7 ENSGT00940000157235 #8 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00510000047602.q.a.b ENSGT00940000157221 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00950000182922.a.a.a.a.v.a.b Bonobo DUPLICATION Bonobo MODERN SPECIES 245 ENSPPAG00000029110 #22 Bonobo MODERN SPECIES 17 ADGRA3 (ENSPPAG00000035849) #8 ENSPPAG00000011801 GBA3 (ENSPPAG00000040905) #9 PPARGC1A (ENSPPAG00000034694) #10 DHX15 (ENSPPAG00000030385) #12 SOD3 (ENSPPAG00000022679) CCDC149 (ENSPPAG00000040269) #13 LGI2 (ENSPPAG00000043039) #14 SEPSECS (ENSPPAG00000037022) #15 PI4K2B (ENSPPAG00000040564) #16 ZCCHC4 (ENSPPAG00000031116) #17 ANAPC4 (ENSPPAG00000040743) #18 SLC34A2 (ENSPPAG00000031554) #19 SEL1L3 (ENSPPAG00000026819) #20 SMIM20 (ENSPPAG00000037198) #21 RBPJ (ENSPPAG00000042016) #22 CCKAR (ENSPPAG00000027751) #23 ENSPPAG00000027805 TBC1D19 (ENSPPAG00000039764) #24 STIM2 (ENSPPAG00000031199) #25 ENSPPAG00000016299 ENSPPAG00000042295 ENSPPAG00000042304 ENSPPAG00000000803 ENSPPAG00000011861 ENSPPAG00000043616 ARAP2 (ENSPPAG00000039913) DTHD1 (ENSPPAG00000036797) NWD2 (ENSPPAG00000043576) C4orf19 (ENSPPAG00000036566) RELL1 (ENSPPAG00000030468) Chimpanzee DUPLICATION Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 22 PRKACG (ENSPTRG00000021003) PIP5K1B (ENSPTRG00000021001) TMEM252 (ENSPTRG00000046632) PGM5 (ENSPTRG00000020999) ENSPTRG00000046738 ENSPTRG00000023301 ENSPTRG00000047309 FOXD4L4 (ENSPTRG00000029251) ENSPTRG00000043500 ENSPTRG00000045680 ENSPTRG00000012453 ENSPTRG00000045466 ENSPTRG00000044630 ENSPTRG00000045832 ENSPTRG00000047349 ENSPTRG00000051438 #22 ENSPTRG00000044230 ENSPTRG00000047131 ENSPTRG00000050918 ENSPTRG00000020961 ENSPTRG00000044054 FAM240B (ENSPTRG00000045884) ANKRD18A (ENSPTRG00000020959) ENSPTRG00000042856 ENSPTRG00000046180 IGFBPL1 (ENSPTRG00000020957) ALDH1B1 (ENSPTRG00000020956) SHB (ENSPTRG00000020955) SLC25A51 (ENSPTRG00000020954) DCAF10 (ENSPTRG00000020953) EXOSC3 (ENSPTRG00000020952) Chimpanzee MODERN SPECIES 678 ENSPTRG00000050028 ENSPTRG00000046898 #22 Chimpanzee MODERN SPECIES 17 ADGRA3 (ENSPTRG00000015949) #8 ENSPTRG00000042867 GBA3 (ENSPTRG00000043929) #9 PPARGC1A (ENSPTRG00000015954) #10 DHX15 (ENSPTRG00000015955) #12 SOD3 (ENSPTRG00000015956) CCDC149 (ENSPTRG00000015957) #13 LGI2 (ENSPTRG00000045126) #14 SEPSECS (ENSPTRG00000015959) #15 PI4K2B (ENSPTRG00000015960) #16 ZCCHC4 (ENSPTRG00000015962) #17 ANAPC4 (ENSPTRG00000015963) #18 SLC34A2 (ENSPTRG00000015965) #19 SEL1L3 (ENSPTRG00000015966) #20 ENSPTRG00000015967 #21 RBPJ (ENSPTRG00000015968) #22 CCKAR (ENSPTRG00000015969) #23 TBC1D19 (ENSPTRG00000015970) #24 STIM2 (ENSPTRG00000015971) #25 ENSPTRG00000052671 ENSPTRG00000045470 PCDH7 (ENSPTRG00000015972) ENSPTRG00000051795 ENSPTRG00000044907 ARAP2 (ENSPTRG00000015973) DTHD1 (ENSPTRG00000022641) NWD2 (ENSPTRG00000015976) C4H4orf19 (ENSPTRG00000015977) RELL1 (ENSPTRG00000015978) ENSPTRG00000045616 PGM2 (ENSPTRG00000015979) Gorilla DUPLICATION Gorilla MODERN SPECIES 96 ENSGGOG00000037805 #22 Gorilla MODERN SPECIES 17 ENSGGOG00000038375 ADGRA3 (ENSGGOG00000026666) #8 ENSGGOG00000026378 GBA3 (ENSGGOG00000013597) #9 PPARGC1A (ENSGGOG00000009810) #10 DHX15 (ENSGGOG00000016819) #12 CCDC149 (ENSGGOG00000010166) #13 LGI2 (ENSGGOG00000023809) #14 SEPSECS (ENSGGOG00000025528) #15 PI4K2B (ENSGGOG00000014057) #16 ZCCHC4 (ENSGGOG00000016476) #17 ANAPC4 (ENSGGOG00000025631) #18 SLC34A2 (ENSGGOG00000016668) #19 SEL1L3 (ENSGGOG00000001417) #20 ENSGGOG00000013757 #21 RBPJ (ENSGGOG00000004582) #22 CCKAR (ENSGGOG00000015177) #23 TBC1D19 (ENSGGOG00000025239) #24 STIM2 (ENSGGOG00000000474) #25 ENSGGOG00000038446 PCDH7 (ENSGGOG00000004233) ENSGGOG00000043031 ENSGGOG00000043518 ENSGGOG00000038770 ENSGGOG00000040174 ARAP2 (ENSGGOG00000007115) DTHD1 (ENSGGOG00000009433) NWD2 (ENSGGOG00000016156) C4orf19 (ENSGGOG00000017146) RELL1 (ENSGGOG00000014944) PGM2 (ENSGGOG00000013725) Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT01040000242873 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Tree shrew MODERN SPECIES 8110 RBPJ (ENSTBEG00000002676) #22 Glires ANCESTRAL SPECIES 8 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Degu MODERN SPECIES 60 ENSODEG00000008774 PUM2 (ENSODEG00000007823) ENSODEG00000010362 RHOB (ENSODEG00000019841) HS1BP3 (ENSODEG00000010003) GDF7 (ENSODEG00000008847) ENSODEG00000008523 APOB (ENSODEG00000008337) ENSODEG00000019494 ENSODEG00000007994 ENSODEG00000019450 ENSODEG00000007428 KLHL29 (ENSODEG00000009928) ENSODEG00000008786 ENSODEG00000009834 ENSODEG00000008643 #22 ENSODEG00000007644 ENSODEG00000007455 ENSODEG00000008882 ENSODEG00000010244 SF3B6 (ENSODEG00000009547) ENSODEG00000007981 PFN4 (ENSODEG00000008303) ENSODEG00000007545 ENSODEG00000007584 NCOA1 (ENSODEG00000008181) PTRHD1 (ENSODEG00000007805) ADCY3 (ENSODEG00000007982) DNAJC27 (ENSODEG00000007488) EFR3B (ENSODEG00000007566) POMC (ENSODEG00000010910) Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000010031 ENSHGLG00000040318 CCP110 (ENSHGLG00000018807) VPS35L (ENSHGLG00000018818) KNOP1 (ENSHGLG00000049260) IQCK (ENSHGLG00000014331) ENSHGLG00000049053 GPR139 (ENSHGLG00000034334) ENSHGLG00000050561 ENSHGLG00000009974 UMOD (ENSHGLG00000006685) PDILT (ENSHGLG00000008450) ACSM5 (ENSHGLG00000010732) ENSHGLG00000011441 ENSHGLG00000037112 ENSHGLG00000012971 #22 ENSHGLG00000006014 ENSHGLG00000049216 ENSHGLG00000007282 ENSHGLG00000049148 ENSHGLG00000007912 BFAR (ENSHGLG00000008907) PARN (ENSHGLG00000010886) MRTFB (ENSHGLG00000019009) ENSHGLG00000049641 ERCC4 (ENSHGLG00000016661) ENSHGLG00000017807 ENSHGLG00000035327 SHISA9 (ENSHGLG00000013207) CPPED1 (ENSHGLG00000011022) SNX29 (ENSHGLG00000012310) Rodentia_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Muroidea ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1885 Apobec1 (ENSNGAG00000022607) Gdf3 (ENSNGAG00000018140) ENSNGAG00000011538 Slc2a3 (ENSNGAG00000012042) Foxj2 (ENSNGAG00000017980) C3ar1 (ENSNGAG00000014090) Necap1 (ENSNGAG00000015511) Clec4a1 (ENSNGAG00000023338) ENSNGAG00000023388 ENSNGAG00000009568 Clec4n (ENSNGAG00000022656) Clec4d (ENSNGAG00000003581) Clec4e (ENSNGAG00000010318) Cd163 (ENSNGAG00000004434) ENSNGAG00000023205 ENSNGAG00000023425 #22 Pex5 (ENSNGAG00000022852) Clstn3 (ENSNGAG00000022664) ENSNGAG00000018451 C1rl (ENSNGAG00000023384) ENSNGAG00000021958 ENSNGAG00000019975 Lpcat3 (ENSNGAG00000019456) Emg1 (ENSNGAG00000022592) ENSNGAG00000023489 Ptpn6 (ENSNGAG00000006668) Grcc10 (ENSNGAG00000015624) Atn1 (ENSNGAG00000003346) Eno2 (ENSNGAG00000019726) Lrrc23 (ENSNGAG00000023434) ENSNGAG00000019265 Upper Galilee mountains blind mole rat MODERN SPECIES 1012 ENSNGAG00000020113 ENSNGAG00000019133 #22 ENSNGAG00000001446 Pcdh10 (ENSNGAG00000014347) Pabpc4l (ENSNGAG00000001502) Pcdh18 (ENSNGAG00000002486) Slc7a11 (ENSNGAG00000012488) Muroidea_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Cricetidae ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Prairie vole MODERN SPECIES 147 ENSMOCG00000001414 ENSMOCG00000000686 ENSMOCG00000000319 #22 ENSMOCG00000000225 ENSMOCG00000022343 Tmem47 (ENSMOCG00000000092) Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Naked mole-rat female MODERN SPECIES 3 TRPM3 (ENSHGLG00000009801) ENSHGLG00000034795 ENSHGLG00000003100 TMEM2 (ENSHGLG00000013965) ABHD17B (ENSHGLG00000032723) ENSHGLG00000015860 ENSHGLG00000044859 ENSHGLG00000013674 GDA (ENSHGLG00000012950) ENSHGLG00000041124 ENSHGLG00000033487 TMC1 (ENSHGLG00000015834) ENSHGLG00000036208 ENSHGLG00000037149 ENSHGLG00000000865 ENSHGLG00000034386 #22 ENSHGLG00000001938 ALDH1A1 (ENSHGLG00000010105) ANXA1 (ENSHGLG00000000400) ENSHGLG00000047470 ENSHGLG00000031934 RORB (ENSHGLG00000000695) ENSHGLG00000040715 TRPM6 (ENSHGLG00000003851) C9orf40 (ENSHGLG00000000280) ENSHGLG00000050025 ENSHGLG00000033948 CARNMT1 (ENSHGLG00000000378) ENSHGLG00000002210 ENSHGLG00000044788 ENSHGLG00000049071 Rodentia ANCESTRAL SPECIES 13 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Kangaroo rat MODERN SPECIES 327 Kcnip4 (ENSDORG00000015626) ENSDORG00000024508 Adgra3 (ENSDORG00000007520) #8 ENSDORG00000011391 #9 Ppargc1a (ENSDORG00000016276) #10 Dhx15 (ENSDORG00000013848) #12 Ccdc149 (ENSDORG00000005628) #13 Lgi2 (ENSDORG00000005632) #14 Sepsecs (ENSDORG00000012655) #15 Pi4k2b (ENSDORG00000000491) #16 ENSDORG00000012901 #17 ENSDORG00000025086 Slc34a2 (ENSDORG00000016105) #19 Sel1l3 (ENSDORG00000011773) #20 Smim20 (ENSDORG00000028531) #21 Rbpj (ENSDORG00000006352) #22 Cckar (ENSDORG00000006353) #23 Tbc1d19 (ENSDORG00000013790) #24 Stim2 (ENSDORG00000016610) #25 ENSDORG00000028755 #25 ENSDORG00000008260 Pcdh7 (ENSDORG00000029117) ENSDORG00000028110 Arap2 (ENSDORG00000008160) Dthd1 (ENSDORG00000001578) Nwd2 (ENSDORG00000023758) 0610040J01Rik (ENSDORG00000011992) Rell1 (ENSDORG00000008354) Pgm2 (ENSDORG00000027647) Tbc1d1 (ENSDORG00000010269) Klf3 (ENSDORG00000023213) Myomorpha ANCESTRAL SPECIES 19 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Lesser Egyptian jerboa MODERN SPECIES 58 Adgra3 (ENSJJAG00000000786) #8 ENSJJAG00000023479 #9 ENSJJAG00000018377 #10 Dhx15 (ENSJJAG00000010364) #12 ENSJJAG00000010774 Sod3 (ENSJJAG00000019475) Ccdc149 (ENSJJAG00000016740) #13 Lgi2 (ENSJJAG00000021018) #14 Sepsecs (ENSJJAG00000001251) #15 Pi4k2b (ENSJJAG00000021578) #16 Zcchc4 (ENSJJAG00000016627) #17 ENSJJAG00000023054 #18 Slc34a2 (ENSJJAG00000023515) #19 Sel1l3 (ENSJJAG00000018980) #20 Smim20 (ENSJJAG00000020734) #21 Rbpj (ENSJJAG00000024408) #22 Cckar (ENSJJAG00000009819) #23 Tbc1d19 (ENSJJAG00000015623) #24 Stim2 (ENSJJAG00000014478) #25 ENSJJAG00000011152 ENSJJAG00000011305 ENSJJAG00000024218 Pcdh7 (ENSJJAG00000021210) Arap2 (ENSJJAG00000009614) Dthd1 (ENSJJAG00000013536) Nwd2 (ENSJJAG00000011338) Rell1 (ENSJJAG00000015408) Muroidea ANCESTRAL SPECIES 17 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Upper Galilee mountains blind mole rat MODERN SPECIES 986 Adgra3 (ENSNGAG00000012199) #8 ENSNGAG00000014375 #9 Ppargc1a (ENSNGAG00000015090) #10 Dhx15 (ENSNGAG00000016196) #12 Sod3 (ENSNGAG00000017105) Ccdc149 (ENSNGAG00000017784) #13 Lgi2 (ENSNGAG00000018556) #14 Sepsecs (ENSNGAG00000000721) #15 Pi4k2b (ENSNGAG00000001252) #16 Zcchc4 (ENSNGAG00000015745) #17 ENSNGAG00000018886 ENSNGAG00000019141 Slc34a2 (ENSNGAG00000000788) #19 Sel1l3 (ENSNGAG00000008965) #20 Smim20 (ENSNGAG00000009723) #21 Rbpj (ENSNGAG00000013338) #22 ENSNGAG00000021067 Cckar (ENSNGAG00000021342) #23 Tbc1d19 (ENSNGAG00000000629) #24 ENSNGAG00000007794 Stim2 (ENSNGAG00000016987) #25 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Murinae ANCESTRAL SPECIES 12 ENSGT00940000160460 #9 ENSGT01100000263543.a ENSGT01100000263511.b.a.b.a.a ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Rat DUPLICATION Rat MODERN SPECIES 5 ENSRNOG00000067137 Ppargc1a (ENSRNOG00000004473) #10 Dhx15 (ENSRNOG00000003844) #12 Sod3 (ENSRNOG00000003869) ENSRNOG00000064588 Ccdc149 (ENSRNOG00000024454) #13 Lgi2 (ENSRNOG00000066201) #14 Sepsecs (ENSRNOG00000049244) #15 Pi4k2b (ENSRNOG00000003924) #16 Zcchc4 (ENSRNOG00000029064) #17 Anapc4 (ENSRNOG00000004130) #18 Slc34a2 (ENSRNOG00000004626) #19 Sel1l3 (ENSRNOG00000004932) #20 AABR07015507.1 (ENSRNOG00000051190) LOC100361259 (ENSRNOG00000055911) Rbpj (ENSRNOG00000046327) #22 Cckar (ENSRNOG00000043124) #23 Tbc1d19 (ENSRNOG00000003003) #24 Stim2 (ENSRNOG00000002956) #25 ENSRNOG00000067114 Pcdh7 (ENSRNOG00000012367) Pcdh7 (ENSRNOG00000063828) ENSRNOG00000067336 AABR07015346.1 (ENSRNOG00000027791) ENSRNOG00000065159 LOC108348204 (ENSRNOG00000063351) ENSRNOG00000065472 Arap2 (ENSRNOG00000056826) AABR07015180.1 (ENSRNOG00000026134) Nwd2 (ENSRNOG00000051837) LOC498368 (ENSRNOG00000002191) Rat MODERN SPECIES 15 Eloc (ENSRNOG00000031730) Ube2w (ENSRNOG00000062415) AABR07046707.1 (ENSRNOG00000042458) ENSRNOG00000069669 Rdh10 (ENSRNOG00000006681) LOC100912291 (ENSRNOG00000047310) LOC297756 (ENSRNOG00000007238) Sbspon (ENSRNOG00000007258) Terf1 (ENSRNOG00000007291) AC125757.1 (ENSRNOG00000028991) AABR07047316.1 (ENSRNOG00000062174) ENSRNOG00000067608 Trpa1 (ENSRNOG00000007354) Msc (ENSRNOG00000007540) Eya1 (ENSRNOG00000007590) Rbpjl2 (ENSRNOG00000007797) #22 Xkr9 (ENSRNOG00000040289) Lactb2 (ENSRNOG00000007829) Tram1 (ENSRNOG00000007892) Ncoa2 (ENSRNOG00000007975) AABR07046763.1 (ENSRNOG00000059973) Prdm14 (ENSRNOG00000021792) Slco5a1 (ENSRNOG00000008966) Sulf1 (ENSRNOG00000009037) RGD1564053 (ENSRNOG00000005375) Prex2 (ENSRNOG00000005391) Cpa6 (ENSRNOG00000005655) Arfgef1 (ENSRNOG00000005703) Cspp1 (ENSRNOG00000021718) Cops5 (ENSRNOG00000006499) Tcf24 (ENSRNOG00000052668) Mus ANCESTRAL SPECIES 14 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00530000063435.a.p ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Shrew mouse MODERN SPECIES 4 Kcnip4 (MGP_PahariEiJ_G0016992) MGP_PahariEiJ_G0016993 Adgra3 (MGP_PahariEiJ_G0016994) #8 Ppargc1a (MGP_PahariEiJ_G0016995) #10 Dhx15 (MGP_PahariEiJ_G0016996) #12 Sod3 (MGP_PahariEiJ_G0016997) Ccdc149 (MGP_PahariEiJ_G0016998) #13 Lgi2 (MGP_PahariEiJ_G0016999) #14 Sepsecs (MGP_PahariEiJ_G0017000) #15 Pi4k2b (MGP_PahariEiJ_G0017001) #16 Zcchc4 (MGP_PahariEiJ_G0017002) #17 Anapc4 (MGP_PahariEiJ_G0017003) #18 Slc34a2 (MGP_PahariEiJ_G0017004) #19 Sel1l3 (MGP_PahariEiJ_G0017005) #20 Smim20 (MGP_PahariEiJ_G0017006) #21 Rbpj (MGP_PahariEiJ_G0017007) #22 Cckar (MGP_PahariEiJ_G0017008) #23 Tbc1d19 (MGP_PahariEiJ_G0017009) #24 Stim2 (MGP_PahariEiJ_G0017010) #25 Pcdh7 (MGP_PahariEiJ_G0017011) G6pd2 (MGP_PahariEiJ_G0017012) Arap2 (MGP_PahariEiJ_G0017013) Dthd1 (MGP_PahariEiJ_G0017014) Nwd2 (MGP_PahariEiJ_G0017015) 0610040J01Rik (MGP_PahariEiJ_G0017016) Rell1 (MGP_PahariEiJ_G0017017) Pgm2 (MGP_PahariEiJ_G0017018) Tbc1d1 (MGP_PahariEiJ_G0017019) Klf3 (MGP_PahariEiJ_G0017020) Tlr1 (MGP_PahariEiJ_G0017021) Tlr6 (MGP_PahariEiJ_G0017022) Mus_A ANCESTRAL SPECIES 6 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00530000063435.a.p ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Ryukyu mouse MODERN SPECIES 14 Kcnip4 (MGP_CAROLIEiJ_G0027210) MGP_CAROLIEiJ_G0027211 Adgra3 (MGP_CAROLIEiJ_G0027212) #8 Ppargc1a (MGP_CAROLIEiJ_G0027213) #10 Dhx15 (MGP_CAROLIEiJ_G0027214) #12 Sod3 (MGP_CAROLIEiJ_G0027215) Ccdc149 (MGP_CAROLIEiJ_G0027216) #13 Lgi2 (MGP_CAROLIEiJ_G0027217) #14 Sepsecs (MGP_CAROLIEiJ_G0027218) #15 Pi4k2b (MGP_CAROLIEiJ_G0027219) #16 Zcchc4 (MGP_CAROLIEiJ_G0027220) #17 Anapc4 (MGP_CAROLIEiJ_G0027221) #18 Slc34a2 (MGP_CAROLIEiJ_G0027222) #19 Sel1l3 (MGP_CAROLIEiJ_G0027223) #20 Smim20 (MGP_CAROLIEiJ_G0027224) #21 MGP_CAROLIEiJ_G0027225 #22 Cckar (MGP_CAROLIEiJ_G0027226) #23 Tbc1d19 (MGP_CAROLIEiJ_G0027227) #24 Stim2 (MGP_CAROLIEiJ_G0027228) #25 Pcdh7 (MGP_CAROLIEiJ_G0027229) G6pd2 (MGP_CAROLIEiJ_G0027230) Arap2 (MGP_CAROLIEiJ_G0027231) Dthd1 (MGP_CAROLIEiJ_G0027232) Nwd2 (MGP_CAROLIEiJ_G0027233) 0610040J01Rik (MGP_CAROLIEiJ_G0027234) Rell1 (MGP_CAROLIEiJ_G0027235) Pgm2 (MGP_CAROLIEiJ_G0027236) MGP_CAROLIEiJ_G0027237 Klf3 (MGP_CAROLIEiJ_G0027238) Tlr1 (MGP_CAROLIEiJ_G0027239) Tlr6 (MGP_CAROLIEiJ_G0027240) Mus_B ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00530000063435.a.p ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Mouse MODERN SPECIES 14 5730480H06Rik (ENSMUSG00000029089) Kcnip4 (ENSMUSG00000029088) Adgra3 (ENSMUSG00000029090) #8 Ppargc1a (ENSMUSG00000029167) #10 Dhx15 (ENSMUSG00000029169) #12 Sod3 (ENSMUSG00000072941) Ccdc149 (ENSMUSG00000045790) #13 Lgi2 (ENSMUSG00000039252) #14 Sepsecs (ENSMUSG00000029173) #15 Pi4k2b (ENSMUSG00000029186) #16 Zcchc4 (ENSMUSG00000029179) #17 Anapc4 (ENSMUSG00000029176) #18 Slc34a2 (ENSMUSG00000029188) #19 Sel1l3 (ENSMUSG00000029189) #20 Smim20 (ENSMUSG00000061461) #21 Rbpj (ENSMUSG00000039191) #22 Cckar (ENSMUSG00000029193) #23 Tbc1d19 (ENSMUSG00000039178) #24 Stim2 (ENSMUSG00000039156) #25 Pcdh7 (ENSMUSG00000029108) G6pd2 (ENSMUSG00000089992) Arap2 (ENSMUSG00000037999) Dthd1 (ENSMUSG00000090326) Nwd2 (ENSMUSG00000090061) 0610040J01Rik (ENSMUSG00000060512) Rell1 (ENSMUSG00000047881) Pgm2 (ENSMUSG00000029171) Tbc1d1 (ENSMUSG00000029174) Klf3 (ENSMUSG00000029178) Tlr1 (ENSMUSG00000044827) Tlr6 (ENSMUSG00000051498) Mus_C ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00530000063435.a.p ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Steppe mouse MODERN SPECIES 3046 Slc34a2 (ENSMSIG00000006630) #19 Sel1l3 (ENSMSIG00000006452) #20 Smim20 (ENSMSIG00000006400) #21 Rbpj (ENSMSIG00000006294) #22 Cckar (ENSMSIG00000006255) #23 Tbc1d19 (ENSMSIG00000006182) #24 Stim2 (ENSMSIG00000006059) #25 spretus MODERN SPECIES 14 5730480H06Rik (MGP_SPRETEiJ_G0028205) Kcnip4 (MGP_SPRETEiJ_G0028206) Adgra3 (MGP_SPRETEiJ_G0028207) #8 Ppargc1a (MGP_SPRETEiJ_G0028208) #10 Dhx15 (MGP_SPRETEiJ_G0028209) #12 Sod3 (MGP_SPRETEiJ_G0028210) Ccdc149 (MGP_SPRETEiJ_G0028211) #13 Lgi2 (MGP_SPRETEiJ_G0028212) #14 Sepsecs (MGP_SPRETEiJ_G0028213) #15 Pi4k2b (MGP_SPRETEiJ_G0028214) #16 Zcchc4 (MGP_SPRETEiJ_G0028215) #17 Anapc4 (MGP_SPRETEiJ_G0028216) #18 Slc34a2 (MGP_SPRETEiJ_G0028217) #19 Sel1l3 (MGP_SPRETEiJ_G0028218) #20 Smim20 (MGP_SPRETEiJ_G0028219) #21 MGP_SPRETEiJ_G0028220 #22 Cckar (MGP_SPRETEiJ_G0028221) #23 Tbc1d19 (MGP_SPRETEiJ_G0028222) #24 Stim2 (MGP_SPRETEiJ_G0028223) #25 Pcdh7 (MGP_SPRETEiJ_G0028224) G6pd2 (MGP_SPRETEiJ_G0028225) Arap2 (MGP_SPRETEiJ_G0028226) Dthd1 (MGP_SPRETEiJ_G0028227) Nwd2 (MGP_SPRETEiJ_G0028228) 0610040J01Rik (MGP_SPRETEiJ_G0028229) Rell1 (MGP_SPRETEiJ_G0028230) Pgm2 (MGP_SPRETEiJ_G0028231) Tbc1d1 (MGP_SPRETEiJ_G0028232) Klf3 (MGP_SPRETEiJ_G0028233) Tlr6 (MGP_SPRETEiJ_G0028235) Fam114a1 (MGP_SPRETEiJ_G0028236) Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00390000010054.b Northern American deer mouse MODERN SPECIES 1 Adgra3 (ENSPEMG00000017979) #8 ENSPEMG00000009892 #9 Ppargc1a (ENSPEMG00000010892) #10 Dhx15 (ENSPEMG00000012226) #12 Sod3 (ENSPEMG00000028688) Ccdc149 (ENSPEMG00000012229) #13 Lgi2 (ENSPEMG00000011026) #14 Sepsecs (ENSPEMG00000006742) #15 Pi4k2b (ENSPEMG00000007793) #16 Zcchc4 (ENSPEMG00000013522) #17 ENSPEMG00000029080 Anapc4 (ENSPEMG00000014070) #18 Slc34a2 (ENSPEMG00000007479) #19 Sel1l3 (ENSPEMG00000020373) #20 Smim20 (ENSPEMG00000030098) #21 Rbpj (ENSPEMG00000010386) #22 Cckar (ENSPEMG00000025192) #23 Tbc1d19 (ENSPEMG00000010326) #24 Stim2 (ENSPEMG00000013752) #25 ENSPEMG00000008427 Pcdh7 (ENSPEMG00000012079) ENSPEMG00000025746 ENSPEMG00000026158 ENSPEMG00000029628 ENSPEMG00000014650 ENSPEMG00000029590 Arap2 (ENSPEMG00000017210) Dthd1 (ENSPEMG00000018338) Nwd2 (ENSPEMG00000018695) 0610040J01Rik (ENSPEMG00000018765) Rell1 (ENSPEMG00000019052) Prairie vole MODERN SPECIES 349 ENSMOCG00000004401 ENSMOCG00000015030 Vwc2 (ENSMOCG00000022092) Zpbp (ENSMOCG00000005757) Spata48 (ENSMOCG00000014867) Ikzf1 (ENSMOCG00000003097) Fignl1 (ENSMOCG00000010841) Ddc (ENSMOCG00000014117) Grb10 (ENSMOCG00000013383) Cobl (ENSMOCG00000016899) ENSMOCG00000001123 ENSMOCG00000001110 Slc34a2 (ENSMOCG00000000230) #19 Sel1l3 (ENSMOCG00000013009) #20 Smim20 (ENSMOCG00000017669) #21 ENSMOCG00000018816 #22 Cckar (ENSMOCG00000004693) #23 Tbc1d19 (ENSMOCG00000013897) #24 Stim2 (ENSMOCG00000017892) #25 ENSMOCG00000000264 ENSMOCG00000004908 ENSMOCG00000017801 Pcdh7 (ENSMOCG00000019554) ENSMOCG00000016594 ENSMOCG00000017532 Arap2 (ENSMOCG00000008948) Dthd1 (ENSMOCG00000019885) Nwd2 (ENSMOCG00000002726) ENSMOCG00000004195 0610040J01Rik (ENSMOCG00000010145) Rell1 (ENSMOCG00000013662) Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Golden Hamster MODERN SPECIES 632 ENSMAUG00000007284 Adgra3 (ENSMAUG00000012066) #8 ENSMAUG00000007935 ENSMAUG00000006861 #9 Ppargc1a (ENSMAUG00000011811) #10 Dhx15 (ENSMAUG00000011535) #12 Ccdc149 (ENSMAUG00000001813) #13 Lgi2 (ENSMAUG00000020219) #14 Sepsecs (ENSMAUG00000002352) #15 Pi4k2b (ENSMAUG00000015492) #16 Zcchc4 (ENSMAUG00000017115) #17 Anapc4 (ENSMAUG00000015911) #18 Slc34a2 (ENSMAUG00000016072) #19 Sel1l3 (ENSMAUG00000009548) #20 Smim20 (ENSMAUG00000016115) #21 Rbpj (ENSMAUG00000020612) #22 Cckar (ENSMAUG00000020673) #23 Tbc1d19 (ENSMAUG00000018698) #24 Stim2 (ENSMAUG00000018372) #25 Chinese hamster chok1gshd MODERN SPECIES 44 ENSCGRG00001005713 Ppargc1a (ENSCGRG00001015534) #10 Dhx15 (ENSCGRG00001023527) #12 Sod3 (ENSCGRG00001009531) Ccdc149 (ENSCGRG00001001092) #13 Lgi2 (ENSCGRG00001010617) #14 Sepsecs (ENSCGRG00001023389) #15 Pi4k2b (ENSCGRG00001005696) #16 Zcchc4 (ENSCGRG00001014205) #17 ENSCGRG00001016709 Anapc4 (ENSCGRG00001021562) #18 Slc34a2 (ENSCGRG00001019379) #19 Sel1l3 (ENSCGRG00001023792) #20 Smim20 (ENSCGRG00001010352) #21 ENSCGRG00001010832 Rbpj (ENSCGRG00001016640) #22 Cckar (ENSCGRG00001015331) #23 Tbc1d19 (ENSCGRG00001021066) #24 ENSCGRG00001004312 Stim2 (ENSCGRG00001012517) #25 ENSCGRG00001002941 ENSCGRG00001005160 ENSCGRG00001012415 Pcdh7 (ENSCGRG00001017637) ENSCGRG00001018983 ENSCGRG00001009672 Arap2 (ENSCGRG00001019683) Dthd1 (ENSCGRG00001007560) ENSCGRG00001015981 ENSCGRG00001005701 Nwd2 (ENSCGRG00001014796) Rodentia_A ANCESTRAL SPECIES 20 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Sciuridae ANCESTRAL SPECIES 19 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Eurasian red squirrel MODERN SPECIES 18 KCNIP4 (ENSSVLG00005015491) ADGRA3 (ENSSVLG00005015123) #8 GBA3 (ENSSVLG00005014999) #9 PPARGC1A (ENSSVLG00005014549) #10 ENSSVLG00005014421 #12 SOD3 (ENSSVLG00005014382) CCDC149 (ENSSVLG00005013936) #13 LGI2 (ENSSVLG00005013643) #14 SEPSECS (ENSSVLG00005013560) #15 ENSSVLG00005013482 #16 ZCCHC4 (ENSSVLG00005013382) #17 ANAPC4 (ENSSVLG00005013305) #18 SLC34A2 (ENSSVLG00005013163) #19 SEL1L3 (ENSSVLG00005012722) #20 SMIM20 (ENSSVLG00005012667) #21 RBPJ (ENSSVLG00005012303) #22 CCKAR (ENSSVLG00005012173) #23 TBC1D19 (ENSSVLG00005011905) #24 ENSSVLG00005011823 STIM2 (ENSSVLG00005011778) #25 ENSSVLG00005011737 ENSSVLG00005011695 ENSSVLG00005011631 ENSSVLG00005011572 PCDH7 (ENSSVLG00005011515) ENSSVLG00005011423 ARAP2 (ENSSVLG00005010880) DTHD1 (ENSSVLG00005010509) ENSSVLG00005010441 ENSSVLG00005010374 C4orf19 (ENSSVLG00005010352) Marmotini ANCESTRAL SPECIES 26 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800.e #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Alpin marmot MODERN SPECIES 9 KCNIP4 (ENSMMMG00000017078) ADGRA3 (ENSMMMG00000017146) #8 GBA3 (ENSMMMG00000017174) #9 PPARGC1A (ENSMMMG00000017190) #10 ENSMMMG00000017220 #11 DHX15 (ENSMMMG00000017227) #12 CCDC149 (ENSMMMG00000017248) #13 LGI2 (ENSMMMG00000017262) #14 SEPSECS (ENSMMMG00000017270) #15 PI4K2B (ENSMMMG00000017289) #16 ZCCHC4 (ENSMMMG00000017301) #17 ANAPC4 (ENSMMMG00000017319) #18 SLC34A2 (ENSMMMG00000017344) #19 SEL1L3 (ENSMMMG00000017356) #20 SMIM20 (ENSMMMG00000017386) #21 RBPJ (ENSMMMG00000017407) #22 CCKAR (ENSMMMG00000017438) #23 STIM2 (ENSMMMG00000017470) #25 ENSMMMG00000017503 ENSMMMG00000017519 ARAP2 (ENSMMMG00000017527) DTHD1 (ENSMMMG00000017544) NWD2 (ENSMMMG00000017559) ENSMMMG00000017574 C4orf19 (ENSMMMG00000017577) RELL1 (ENSMMMG00000017587) PGM2 (ENSMMMG00000017606) TBC1D1 (ENSMMMG00000017620) ENSMMMG00000017716 KLF3 (ENSMMMG00000017721) TLR10 (ENSMMMG00000017725) Marmotini_b ANCESTRAL SPECIES 33 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00900000143693 #11 ENSGT00940000155800.e #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b.g #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Arctic ground squirrel MODERN SPECIES 9 ADGRA3 (ENSUPAG00010018174) #8 GBA3 (ENSUPAG00010018197) #9 PPARGC1A (ENSUPAG00010018212) #10 ENSUPAG00010018232 #11 DHX15 (ENSUPAG00010018237) #12 SOD3 (ENSUPAG00010018252) CCDC149 (ENSUPAG00010018257) #13 LGI2 (ENSUPAG00010018269) #14 SEPSECS (ENSUPAG00010018289) #15 PI4K2B (ENSUPAG00010018304) #16 ZCCHC4 (ENSUPAG00010018312) #17 ANAPC4 (ENSUPAG00010018324) #18 ENSUPAG00010018366 #19 SEL1L3 (ENSUPAG00010018378) #20 SMIM20 (ENSUPAG00010018408) #21 RBPJ (ENSUPAG00010018415) #22 CCKAR (ENSUPAG00010018463) #23 TBC1D19 (ENSUPAG00010018475) #24 STIM2 (ENSUPAG00010018502) #25 Squirrel MODERN SPECIES 77 PACRGL (ENSSTOG00000014307) KCNIP4 (ENSSTOG00000014315) ADGRA3 (ENSSTOG00000008272) #8 GBA3 (ENSSTOG00000030967) #9 PPARGC1A (ENSSTOG00000012522) #10 ENSSTOG00000015000 #12 ENSSTOG00000025245 #13 LGI2 (ENSSTOG00000002210) #14 SEPSECS (ENSSTOG00000013399) #15 PI4K2B (ENSSTOG00000016146) #16 ZCCHC4 (ENSSTOG00000023603) #17 ANAPC4 (ENSSTOG00000016156) #18 SLC34A2 (ENSSTOG00000012971) #19 SEL1L3 (ENSSTOG00000010415) #20 SMIM20 (ENSSTOG00000004810) #21 RBPJ (ENSSTOG00000004547) #22 CCKAR (ENSSTOG00000028796) #23 TBC1D19 (ENSSTOG00000024301) #24 STIM2 (ENSSTOG00000014072) #25 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Naked mole-rat female MODERN SPECIES 1 PPARGC1A (ENSHGLG00000007022) #10 DHX15 (ENSHGLG00000006630) #12 SOD3 (ENSHGLG00000047646) CCDC149 (ENSHGLG00000045906) #13 LGI2 (ENSHGLG00000034196) #14 ENSHGLG00000031983 SEPSECS (ENSHGLG00000005236) #15 PI4K2B (ENSHGLG00000005194) #16 ZCCHC4 (ENSHGLG00000005154) #17 ENSHGLG00000039602 ANAPC4 (ENSHGLG00000004987) #18 SLC34A2 (ENSHGLG00000012163) #19 SEL1L3 (ENSHGLG00000011887) #20 ENSHGLG00000042802 ENSHGLG00000048407 RBPJ (ENSHGLG00000010901) #22 CCKAR (ENSHGLG00000041648) #23 TBC1D19 (ENSHGLG00000009465) #24 ENSHGLG00000009110 #25 ENSHGLG00000038509 ENSHGLG00000008412 ENSHGLG00000020704 ENSHGLG00000038050 ENSHGLG00000042856 ENSHGLG00000007929 ENSHGLG00000032804 ENSHGLG00000008642 ARAP2 (ENSHGLG00000001750) DTHD1 (ENSHGLG00000006344) ENSHGLG00000000242 ENSHGLG00000037767 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Guinea pig MODERN SPECIES 50 ADGRA3 (ENSCPOG00000014179) #8 GBA3 (ENSCPOG00000024273) #9 PPARGC1A (ENSCPOG00000001518) #10 DHX15 (ENSCPOG00000006467) #12 SOD3 (ENSCPOG00000035072) CCDC149 (ENSCPOG00000008895) #13 LGI2 (ENSCPOG00000024161) #14 SEPSECS (ENSCPOG00000035974) #15 PI4K2B (ENSCPOG00000015398) #16 ZCCHC4 (ENSCPOG00000011477) #17 ANAPC4 (ENSCPOG00000013122) #18 SLC34A2 (ENSCPOG00000024165) #19 SEL1L3 (ENSCPOG00000001037) #20 SMIM20 (ENSCPOG00000007684) #21 ENSCPOG00000040682 RBPJ (ENSCPOG00000007041) #22 CCKAR (ENSCPOG00000007046) #23 TBC1D19 (ENSCPOG00000003940) #24 STIM2 (ENSCPOG00000003408) #25 PCDH7 (ENSCPOG00000009659) ARAP2 (ENSCPOG00000003037) DTHD1 (ENSCPOG00000012919) Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Degu MODERN SPECIES 47 KCNIP4 (ENSODEG00000009132) ADGRA3 (ENSODEG00000008912) #8 GBA3 (ENSODEG00000007983) #9 ENSODEG00000008409 #10 ENSODEG00000008891 #12 ENSODEG00000008421 #13 LGI2 (ENSODEG00000009206) #14 SEPSECS (ENSODEG00000010607) #15 PI4K2B (ENSODEG00000008999) #16 ENSODEG00000007449 #17 ENSODEG00000006972 ENSODEG00000019525 SLC34A2 (ENSODEG00000010839) #19 SEL1L3 (ENSODEG00000008196) #20 ENSODEG00000007321 #21 ENSODEG00000007277 #22 CCKAR (ENSODEG00000007359) #23 TBC1D19 (ENSODEG00000007019) #24 ENSODEG00000008773 #25 ENSODEG00000006518 #25 ENSODEG00000019413 ENSODEG00000006666 ENSODEG00000007600 PCDH7 (ENSODEG00000007387) ENSODEG00000006993 ENSODEG00000019660 ARAP2 (ENSODEG00000006699) DTHD1 (ENSODEG00000007001) Long-tailed chinchilla MODERN SPECIES 150 SEPSECS (ENSCLAG00000001790) #15 PI4K2B (ENSCLAG00000001759) #16 ZCCHC4 (ENSCLAG00000003884) #17 ANAPC4 (ENSCLAG00000003544) #18 ENSCLAG00000002958 SLC34A2 (ENSCLAG00000002636) #19 SEL1L3 (ENSCLAG00000002362) #20 SMIM20 (ENSCLAG00000002089) #21 RBPJ (ENSCLAG00000002065) #22 CCKAR (ENSCLAG00000001729) #23 TBC1D19 (ENSCLAG00000001699) #24 STIM2 (ENSCLAG00000002849) #25 PCDH7 (ENSCLAG00000002605) ARAP2 (ENSCLAG00000012467) DTHD1 (ENSCLAG00000011952) NWD2 (ENSCLAG00000010818) C4orf19 (ENSCLAG00000010706) RELL1 (ENSCLAG00000010401) PGM2 (ENSCLAG00000010266) TBC1D1 (ENSCLAG00000002236) KLF3 (ENSCLAG00000004459) TLR10 (ENSCLAG00000004336) TLR1 (ENSCLAG00000017579) TLR6 (ENSCLAG00000017630) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000158985 ENSGT00940000157235 #8 ENSGT00940000160460 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #12 ENSGT00940000162224 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 ENSGT00940000160197 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Pika MODERN SPECIES 2489 SLC34A2 (ENSOPRG00000001382) #19 SEL1L3 (ENSOPRG00000001401) #20 SMIM20 (ENSOPRG00000001454) #21 RBPJ (ENSOPRG00000001466) #22 CCKAR (ENSOPRG00000001491) #23 TBC1D19 (ENSOPRG00000001504) #24 Rabbit DUPLICATION Rabbit MODERN SPECIES 11 ENSOCUG00000000919 #8 GBA3 (ENSOCUG00000005568) #9 PPARGC1A (ENSOCUG00000014668) #10 DHX15 (ENSOCUG00000003026) #12 ENSOCUG00000019163 ENSOCUG00000007460 CCDC149 (ENSOCUG00000007463) #13 LGI2 (ENSOCUG00000004764) #14 SEPSECS (ENSOCUG00000008262) #15 PI4K2B (ENSOCUG00000015972) #16 ZCCHC4 (ENSOCUG00000015990) #17 ANAPC4 (ENSOCUG00000016004) #18 SLC34A2 (ENSOCUG00000002944) #19 SEL1L3 (ENSOCUG00000017195) #20 SMIM20 (ENSOCUG00000034394) #21 RBPJ (ENSOCUG00000013449) #22 CCKAR (ENSOCUG00000013457) #23 TBC1D19 (ENSOCUG00000013465) #24 STIM2 (ENSOCUG00000014185) #25 ENSOCUG00000038061 ENSOCUG00000026856 ENSOCUG00000039608 ENSOCUG00000030289 ENSOCUG00000035672 PCDH7 (ENSOCUG00000000290) ENSOCUG00000023563 ENSOCUG00000010124 ENSOCUG00000036228 ARAP2 (ENSOCUG00000015669) DTHD1 (ENSOCUG00000001098) NWD2 (ENSOCUG00000012238) Rabbit MODERN SPECIES 11 ENSOCUG00000022570 QPCT (ENSOCUG00000007416) PRKD3 (ENSOCUG00000007411) ENSOCUG00000007239 CEBPZ (ENSOCUG00000007230) ENSOCUG00000029893 SULT6B1 (ENSOCUG00000007229) EIF2AK2 (ENSOCUG00000007223) GPATCH11 (ENSOCUG00000007217) HEATR5B (ENSOCUG00000007205) STRN (ENSOCUG00000007258) VIT (ENSOCUG00000007249) FEZ2 (ENSOCUG00000014879) CRIM1 (ENSOCUG00000001595) ENSOCUG00000032042 ENSOCUG00000038657 #22 FAM98A (ENSOCUG00000015457) RASGRP3 (ENSOCUG00000015439) ENSOCUG00000036940 LTBP1 (ENSOCUG00000009598) TTC27 (ENSOCUG00000009586) BIRC6 (ENSOCUG00000006600) YIPF4 (ENSOCUG00000007591) SLC30A6 (ENSOCUG00000005403) ENSOCUG00000038042 SPAST (ENSOCUG00000010252) ENSOCUG00000017877 ENSOCUG00000005878 ENSOCUG00000036681 SRD5A2 (ENSOCUG00000001236) XDH (ENSOCUG00000001230)