Bilateria ANCESTRAL SPECIES ENSGT00390000005197 #22 Chordata DUPLICATION Chordata ANCESTRAL SPECIES ENSGT00390000005197.a #22 Vertebrata ANCESTRAL SPECIES ENSGT00390000005197.a #22 Gnathostomata ANCESTRAL SPECIES 9 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 ENSGT00390000010054.b ENSGT00940000155358 Euteleostomi ANCESTRAL SPECIES ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00940000177623 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 Sarcopterygii ANCESTRAL SPECIES 2 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000170408 ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Tetrapoda ANCESTRAL SPECIES 3 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00940000177623 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 Amniota ANCESTRAL SPECIES 2 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00940000177623 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 Mammalia ANCESTRAL SPECIES 1 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 Theria ANCESTRAL SPECIES 6 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 Eutheria ANCESTRAL SPECIES 2 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Primates ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Haplorrhini ANCESTRAL SPECIES 23 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00900000143434 Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00390000009693.m.b Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00390000009693.m.b Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.i.a #20 ENSGT00390000014814.a.b.a.b.b ENSGT00390000002398.j ##20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ##27 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 #30 ENSGT00940000164947 #32 ENSGT00390000014092.k.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000170408 Macaca ANCESTRAL SPECIES 25 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.i.a #20 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ##27 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00910000147204 ENSGT00910000147191 ENSGT00940000164947 #32 ENSGT00390000014092.k.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00950000183010.a.a.a.b.a.a.a.a.b.a ENSGT00940000153648.b Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.a.b.b.a #16 ENSGT01100000263493.a.b.a.a.b.a.a.b.b.b.a.b.a.a.a.a.a.b #17 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.i.a #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.a.c.b #26 ENSGT00940000157221 #28 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.a.a.b.b.a.b.b #29 ENSGT00940000164947 #32 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01100000263493.a.b.a.a.a.b.b.b.b.c.a ##29 ENSGT01030000235076 Crab-eating macaque MODERN SPECIES 15 SOD3 (ENSMFAG00000020365) #7 ENSMFAG00000055313 #8 CCDC149 (ENSMFAG00000042580) #9 LGI2 (ENSMFAG00000036970) #10 SEPSECS (ENSMFAG00000003516) #11 PI4K2B (ENSMFAG00000033102) #12 ENSMFAG00000056821 #13 ZCCHC4 (ENSMFAG00000033636) #14 ANAPC4 (ENSMFAG00000037891) #15 ENSMFAG00000065080 #16 ENSMFAG00000049099 #17 SLC34A2 (ENSMFAG00000020407) #18 SEL1L3 (ENSMFAG00000002093) #19 SMIM20 (ENSMFAG00000033269) #20 ENSMFAG00000049001 #21 RBPJ (ENSMFAG00000001779) #22 CCKAR (ENSMFAG00000003530) #23 TBC1D19 (ENSMFAG00000000286) #24 STIM2 (ENSMFAG00000034185) #25 ENSMFAG00000056885 #26 ENSMFAG00000036136 #27 PCDH7 (ENSMFAG00000040327) #28 ENSMFAG00000049710 #29 ENSMFAG00000064925 #30 ENSMFAG00000065581 #31 ENSMFAG00000039044 #32 ENSMFAG00000047594 #33 ENSMFAG00000055627 #34 ENSMFAG00000055647 #35 ENSMFAG00000050317 #36 ARAP2 (ENSMFAG00000041357) #37 Rhesus MODERN SPECIES 15 PPARGC1A (ENSMMUG00000001844) DHX15 (ENSMMUG00000009637) SOD3 (ENSMMUG00000002612) #7 CCDC149 (ENSMMUG00000004785) #9 ENSMMUG00000062929 ENSMMUG00000052018 LGI2 (ENSMMUG00000060440) #10 SEPSECS (ENSMMUG00000019784) #11 PI4K2B (ENSMMUG00000003629) #12 ANAPC4 (ENSMMUG00000004458) #15 ENSMMUG00000053638 #16 ENSMMUG00000049554 #17 SLC34A2 (ENSMMUG00000021135) #18 SEL1L3 (ENSMMUG00000020349) #19 ENSMMUG00000006680 #20 RBPJ (ENSMMUG00000015828) #22 CCKAR (ENSMMUG00000049298) #23 TBC1D19 (ENSMMUG00000019239) #24 STIM2 (ENSMMUG00000009439) #25 ENSMMUG00000055119 ENSMMUG00000060404 #26 PCDH7 (ENSMMUG00000011898) #28 ENSMMUG00000056986 #29 ENSMMUG00000062143 #32 ENSMMUG00000059032 ARAP2 (ENSMMUG00000006871) #37 DTHD1 (ENSMMUG00000006875) NWD2 (ENSMMUG00000003676) C5H4orf19 (ENSMMUG00000009691) RELL1 (ENSMMUG00000017630) PGM2 (ENSMMUG00000000232) Pig-tailed macaque MODERN SPECIES 141 GBA3 (ENSMNEG00000038431) PPARGC1A (ENSMNEG00000028682) ENSMNEG00000013564 DHX15 (ENSMNEG00000035145) ENSMNEG00000005920 #8 CCDC149 (ENSMNEG00000034296) #9 LGI2 (ENSMNEG00000015411) #10 SEPSECS (ENSMNEG00000041117) #11 PI4K2B (ENSMNEG00000010678) #12 ZCCHC4 (ENSMNEG00000027221) #14 ANAPC4 (ENSMNEG00000044256) #15 SLC34A2 (ENSMNEG00000033278) #18 SEL1L3 (ENSMNEG00000044018) #19 ENSMNEG00000045287 #20 ENSMNEG00000027453 RBPJ (ENSMNEG00000037915) #22 CCKAR (ENSMNEG00000038424) #23 TBC1D19 (ENSMNEG00000031445) #24 ENSMNEG00000032694 STIM2 (ENSMNEG00000032563) #25 ENSMNEG00000029234 ##27 ENSMNEG00000038617 ENSMNEG00000034187 PCDH7 (ENSMNEG00000044686) #28 ENSMNEG00000008266 ENSMNEG00000010411 ENSMNEG00000034911 #32 ENSMNEG00000019076 ARAP2 (ENSMNEG00000033019) #37 DTHD1 (ENSMNEG00000045184) ENSMNEG00000043393 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.j ##20 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ##27 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 #30 ENSGT00940000164947 #32 ENSGT00390000014092.k.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000170408 Olive baboon MODERN SPECIES 13 CCDC149 (ENSPANG00000020855) #9 LGI2 (ENSPANG00000016910) #10 ENSPANG00000050688 SEPSECS (ENSPANG00000021177) #11 PI4K2B (ENSPANG00000024999) #12 ENSPANG00000008337 #13 ZCCHC4 (ENSPANG00000013373) #14 ANAPC4 (ENSPANG00000019352) #15 ENSPANG00000037863 ENSPANG00000046005 ##29 SLC34A2 (ENSPANG00000043751) #18 ENSPANG00000041131 ##29 SEL1L3 (ENSPANG00000000072) #19 SMIM20 (ENSPANG00000032807) ##20 ENSPANG00000030947 RBPJ (ENSPANG00000021176) #22 ENSPANG00000050241 ##16 CCKAR (ENSPANG00000019759) #23 ENSPANG00000045844 ##8 ENSPANG00000037534 TBC1D19 (ENSPANG00000019571) #24 ENSPANG00000033456 STIM2 (ENSPANG00000016909) #25 ENSPANG00000042786 ##26 ENSPANG00000040765 ENSPANG00000043923 ##29 PCDH7 (ENSPANG00000015663) #28 ENSPANG00000043052 ##16 ENSPANG00000008054 ENSPANG00000046206 ARAP2 (ENSPANG00000021175) #37 Cercopithecinae_d ANCESTRAL SPECIES 91 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.j ##20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b.a ENSGT00390000000214.a.b #25 ENSGT00390000013931.a.b.b.`b.b ##27 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00910000147191 ENSGT00860000135660 #30 Drill MODERN SPECIES 1453 RBPJ (ENSMLEG00000031229) #22 CCKAR (ENSMLEG00000030034) #23 TBC1D19 (ENSMLEG00000011583) #24 STIM2 (ENSMLEG00000022797) #25 Sooty mangabey MODERN SPECIES 551 ADGRA3 (ENSCATG00000042545) GBA3 (ENSCATG00000042364) PPARGC1A (ENSCATG00000032575) ENSCATG00000022340 DHX15 (ENSCATG00000000715) SOD3 (ENSCATG00000021168) #7 CCDC149 (ENSCATG00000037847) #9 LGI2 (ENSCATG00000043883) #10 SEPSECS (ENSCATG00000041245) #11 PI4K2B (ENSCATG00000015768) #12 ZCCHC4 (ENSCATG00000028628) #14 ANAPC4 (ENSCATG00000035985) #15 SLC34A2 (ENSCATG00000029842) #18 SEL1L3 (ENSCATG00000038183) #19 ENSCATG00000032458 ##20 RBPJ (ENSCATG00000044181) #22 CCKAR (ENSCATG00000038819) #23 TBC1D19 (ENSCATG00000009189) #24 ENSCATG00000039543 STIM2 (ENSCATG00000030868) #25 ENSCATG00000018899 ##27 ENSCATG00000044558 PCDH7 (ENSCATG00000039870) #28 ENSCATG00000023352 ENSCATG00000041818 Vervet Monkey MODERN SPECIES 19 KCNIP4 (ENSCSAG00000016556) ADGRA3 (ENSCSAG00000016562) GBA3 (ENSCSAG00000016567) PPARGC1A (ENSCSAG00000016575) DHX15 (ENSCSAG00000016601) SOD3 (ENSCSAG00000019694) #7 CCDC149 (ENSCSAG00000016607) #9 LGI2 (ENSCSAG00000016614) #10 SEPSECS (ENSCSAG00000016622) #11 PI4K2B (ENSCSAG00000016627) #12 ZCCHC4 (ENSCSAG00000016633) #14 ANAPC4 (ENSCSAG00000016642) #15 SLC34A2 (ENSCSAG00000016651) #18 SEL1L3 (ENSCSAG00000016666) #19 ENSCSAG00000016669 #20 RBPJ (ENSCSAG00000016678) #22 CCKAR (ENSCSAG00000016683) #23 TBC1D19 (ENSCSAG00000016710) #24 ENSCSAG00000016720 STIM2 (ENSCSAG00000016726) #25 ENSCSAG00000016727 PCDH7 (ENSCSAG00000016736) #28 ENSCSAG00000016748 ARAP2 (ENSCSAG00000016819) #37 DTHD1 (ENSCSAG00000016834) NWD2 (ENSCSAG00000016836) C4orf19 (ENSCSAG00000016838) RELL1 (ENSCSAG00000016840) PGM2 (ENSCSAG00000016846) TBC1D1 (ENSCSAG00000016865) KLF3 (ENSCSAG00000016868) Rhinopithecus ANCESTRAL SPECIES 553 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000014814.a.b.a.b.b ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00390000008128.c.a.b Black snub-nosed monkey MODERN SPECIES 140 SEL1L3 (ENSRBIG00000040589) #19 ENSRBIG00000030320 #20 ENSRBIG00000015089 RBPJ (ENSRBIG00000040340) #22 CCKAR (ENSRBIG00000044006) #23 TBC1D19 (ENSRBIG00000032962) #24 STIM2 (ENSRBIG00000030774) #25 ENSRBIG00000041821 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 538 ENSRROG00000037809 #22 Golden snub-nosed monkey MODERN SPECIES 1367 SEL1L3 (ENSRROG00000006205) #19 SMIM20 (ENSRROG00000035862) #20 ENSRROG00000037997 ENSRROG00000024203 RBPJ (ENSRROG00000008767) #22 CCKAR (ENSRROG00000030028) #23 Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Gibbon MODERN SPECIES 12 ENSNLEG00000027847 GBA3 (ENSNLEG00000016754) PPARGC1A (ENSNLEG00000016760) DHX15 (ENSNLEG00000016767) SOD3 (ENSNLEG00000032570) #7 CCDC149 (ENSNLEG00000016779) #9 LGI2 (ENSNLEG00000016796) #10 SEPSECS (ENSNLEG00000016800) #11 PI4K2B (ENSNLEG00000016814) #12 ZCCHC4 (ENSNLEG00000016824) #14 ANAPC4 (ENSNLEG00000016831) #15 SLC34A2 (ENSNLEG00000016860) #18 SEL1L3 (ENSNLEG00000016867) #19 ENSNLEG00000016894 #20 ENSNLEG00000032692 RBPJ (ENSNLEG00000016895) #22 CCKAR (ENSNLEG00000016913) #23 TBC1D19 (ENSNLEG00000016920) #24 STIM2 (ENSNLEG00000016942) #25 ENSNLEG00000030375 #28 ENSNLEG00000030577 ARAP2 (ENSNLEG00000016967) #37 DTHD1 (ENSNLEG00000016995) NWD2 (ENSNLEG00000016998) C4orf19 (ENSNLEG00000035513) RELL1 (ENSNLEG00000017005) PGM2 (ENSNLEG00000017010) ENSNLEG00000035345 TBC1D1 (ENSNLEG00000017022) KLF3 (ENSNLEG00000017046) TLR10 (ENSNLEG00000017048) Hominidae ANCESTRAL SPECIES 12 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Orangutan MODERN SPECIES 17 GBA3 (ENSPPYG00000014639) PPARGC1A (ENSPPYG00000014640) DHX15 (ENSPPYG00000014641) ENSPPYG00000036250 SOD3 (ENSPPYG00000014642) #7 CCDC149 (ENSPPYG00000014643) #9 LGI2 (ENSPPYG00000039828) #10 SEPSECS (ENSPPYG00000014645) #11 PI4K2B (ENSPPYG00000014646) #12 ZCCHC4 (ENSPPYG00000014647) #14 ANAPC4 (ENSPPYG00000034769) #15 SLC34A2 (ENSPPYG00000014649) #18 ENSPPYG00000031785 SEL1L3 (ENSPPYG00000014650) #19 SMIM20 (ENSPPYG00000014651) #20 RBPJ (ENSPPYG00000014652) #22 CCKAR (ENSPPYG00000014653) #23 TBC1D19 (ENSPPYG00000014654) #24 STIM2 (ENSPPYG00000014655) #25 PCDH7 (ENSPPYG00000031272) #28 ENSPPYG00000031494 #28 ENSPPYG00000034474 #30 ARAP2 (ENSPPYG00000032983) #37 DTHD1 (ENSPPYG00000037872) NWD2 (ENSPPYG00000030808) C4orf19 (ENSPPYG00000038950) RELL1 (ENSPPYG00000031559) PGM2 (ENSPPYG00000014661) TBC1D1 (ENSPPYG00000014663) KLF3 (ENSPPYG00000014666) TLR10 (ENSPPYG00000014667) Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00940000157235 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00770000121815 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00770000121815 Human MODERN SPECIES 16 KCNIP4 (ENSG00000185774) ADGRA3 (ENSG00000152990) GBA3 (ENSG00000249948) PPARGC1A (ENSG00000109819) DHX15 (ENSG00000109606) SOD3 (ENSG00000109610) #7 CCDC149 (ENSG00000181982) #9 LGI2 (ENSG00000153012) #10 SEPSECS (ENSG00000109618) #11 PI4K2B (ENSG00000038210) #12 ZCCHC4 (ENSG00000168228) #14 ANAPC4 (ENSG00000053900) #15 SLC34A2 (ENSG00000157765) #18 SEL1L3 (ENSG00000091490) #19 SMIM20 (ENSG00000250317) #20 RBPJ (ENSG00000168214) #22 CCKAR (ENSG00000163394) #23 TBC1D19 (ENSG00000109680) #24 STIM2 (ENSG00000109689) #25 PCDH7 (ENSG00000169851) #28 ARAP2 (ENSG00000047365) #37 DTHD1 (ENSG00000197057) NWD2 (ENSG00000174145) C4orf19 (ENSG00000154274) RELL1 (ENSG00000181826) PGM2 (ENSG00000169299) TBC1D1 (ENSG00000065882) PTTG2 (ENSG00000250254) KLF3 (ENSG00000109787) TLR10 (ENSG00000174123) TLR1 (ENSG00000174125) Pan ANCESTRAL SPECIES 7 ENSGT00940000157235 ENSGT00950000182891.a.a.b.a.b.a.s.c.a ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00510000047602.q.a.b ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00910000147204 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00950000182922.a.a.a.a.v.a.b Bonobo DUPLICATION Bonobo MODERN SPECIES 245 ENSPPAG00000029110 #22 Bonobo MODERN SPECIES 17 ADGRA3 (ENSPPAG00000035849) ENSPPAG00000011801 GBA3 (ENSPPAG00000040905) PPARGC1A (ENSPPAG00000034694) DHX15 (ENSPPAG00000030385) SOD3 (ENSPPAG00000022679) #7 CCDC149 (ENSPPAG00000040269) #9 LGI2 (ENSPPAG00000043039) #10 SEPSECS (ENSPPAG00000037022) #11 PI4K2B (ENSPPAG00000040564) #12 ZCCHC4 (ENSPPAG00000031116) #14 ANAPC4 (ENSPPAG00000040743) #15 SLC34A2 (ENSPPAG00000031554) #18 SEL1L3 (ENSPPAG00000026819) #19 SMIM20 (ENSPPAG00000037198) #20 RBPJ (ENSPPAG00000042016) #22 CCKAR (ENSPPAG00000027751) #23 ENSPPAG00000027805 TBC1D19 (ENSPPAG00000039764) #24 STIM2 (ENSPPAG00000031199) #25 ENSPPAG00000016299 ENSPPAG00000042295 ENSPPAG00000042304 #28 ENSPPAG00000000803 ENSPPAG00000011861 #30 ENSPPAG00000043616 ARAP2 (ENSPPAG00000039913) #37 DTHD1 (ENSPPAG00000036797) NWD2 (ENSPPAG00000043576) C4orf19 (ENSPPAG00000036566) RELL1 (ENSPPAG00000030468) Chimpanzee DUPLICATION Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 22 PRKACG (ENSPTRG00000021003) PIP5K1B (ENSPTRG00000021001) TMEM252 (ENSPTRG00000046632) PGM5 (ENSPTRG00000020999) ENSPTRG00000046738 ENSPTRG00000023301 ENSPTRG00000047309 FOXD4L4 (ENSPTRG00000029251) ENSPTRG00000043500 ENSPTRG00000045680 ENSPTRG00000012453 ENSPTRG00000045466 ENSPTRG00000044630 ENSPTRG00000045832 ENSPTRG00000047349 ENSPTRG00000051438 #22 ENSPTRG00000044230 ENSPTRG00000047131 ENSPTRG00000050918 ENSPTRG00000020961 ENSPTRG00000044054 FAM240B (ENSPTRG00000045884) ANKRD18A (ENSPTRG00000020959) ENSPTRG00000042856 ENSPTRG00000046180 IGFBPL1 (ENSPTRG00000020957) ALDH1B1 (ENSPTRG00000020956) SHB (ENSPTRG00000020955) SLC25A51 (ENSPTRG00000020954) DCAF10 (ENSPTRG00000020953) EXOSC3 (ENSPTRG00000020952) Chimpanzee MODERN SPECIES 678 ENSPTRG00000050028 ENSPTRG00000046898 #22 Chimpanzee MODERN SPECIES 17 ADGRA3 (ENSPTRG00000015949) ENSPTRG00000042867 GBA3 (ENSPTRG00000043929) PPARGC1A (ENSPTRG00000015954) DHX15 (ENSPTRG00000015955) SOD3 (ENSPTRG00000015956) #7 CCDC149 (ENSPTRG00000015957) #9 LGI2 (ENSPTRG00000045126) #10 SEPSECS (ENSPTRG00000015959) #11 PI4K2B (ENSPTRG00000015960) #12 ZCCHC4 (ENSPTRG00000015962) #14 ANAPC4 (ENSPTRG00000015963) #15 SLC34A2 (ENSPTRG00000015965) #18 SEL1L3 (ENSPTRG00000015966) #19 ENSPTRG00000015967 #20 RBPJ (ENSPTRG00000015968) #22 CCKAR (ENSPTRG00000015969) #23 TBC1D19 (ENSPTRG00000015970) #24 STIM2 (ENSPTRG00000015971) #25 ENSPTRG00000052671 ENSPTRG00000045470 PCDH7 (ENSPTRG00000015972) #28 ENSPTRG00000051795 ENSPTRG00000044907 ARAP2 (ENSPTRG00000015973) #37 DTHD1 (ENSPTRG00000022641) NWD2 (ENSPTRG00000015976) C4H4orf19 (ENSPTRG00000015977) RELL1 (ENSPTRG00000015978) ENSPTRG00000045616 PGM2 (ENSPTRG00000015979) Gorilla DUPLICATION Gorilla MODERN SPECIES 96 ENSGGOG00000037805 #22 Gorilla MODERN SPECIES 17 ENSGGOG00000038375 ADGRA3 (ENSGGOG00000026666) ENSGGOG00000026378 GBA3 (ENSGGOG00000013597) PPARGC1A (ENSGGOG00000009810) DHX15 (ENSGGOG00000016819) CCDC149 (ENSGGOG00000010166) #9 LGI2 (ENSGGOG00000023809) #10 SEPSECS (ENSGGOG00000025528) #11 PI4K2B (ENSGGOG00000014057) #12 ZCCHC4 (ENSGGOG00000016476) #14 ANAPC4 (ENSGGOG00000025631) #15 SLC34A2 (ENSGGOG00000016668) #18 SEL1L3 (ENSGGOG00000001417) #19 ENSGGOG00000013757 #20 RBPJ (ENSGGOG00000004582) #22 CCKAR (ENSGGOG00000015177) #23 TBC1D19 (ENSGGOG00000025239) #24 STIM2 (ENSGGOG00000000474) #25 ENSGGOG00000038446 PCDH7 (ENSGGOG00000004233) #28 ENSGGOG00000043031 ENSGGOG00000043518 ENSGGOG00000038770 ENSGGOG00000040174 ARAP2 (ENSGGOG00000007115) #37 DTHD1 (ENSGGOG00000009433) NWD2 (ENSGGOG00000016156) C4orf19 (ENSGGOG00000017146) RELL1 (ENSGGOG00000014944) PGM2 (ENSGGOG00000013725) Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000158985.c ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000008128.c.a.b ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 Mas night monkey MODERN SPECIES 1274 PACRGL (ENSANAG00000026655) KCNIP4 (ENSANAG00000020849) ADGRA3 (ENSANAG00000029226) GBA3 (ENSANAG00000033499) PPARGC1A (ENSANAG00000035930) DHX15 (ENSANAG00000020669) CCDC149 (ENSANAG00000029354) #9 LGI2 (ENSANAG00000027724) #10 SEPSECS (ENSANAG00000035197) #11 PI4K2B (ENSANAG00000030238) #12 ZCCHC4 (ENSANAG00000034646) #14 ANAPC4 (ENSANAG00000028966) #15 SLC34A2 (ENSANAG00000020569) #18 SEL1L3 (ENSANAG00000035152) #19 SMIM20 (ENSANAG00000027622) #20 RBPJ (ENSANAG00000028890) #22 CCKAR (ENSANAG00000033444) #23 TBC1D19 (ENSANAG00000034488) #24 STIM2 (ENSANAG00000030101) #25 ENSANAG00000021496 Cebidae ANCESTRAL SPECIES 4 ENSGT00940000158985.c ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 Marmoset MODERN SPECIES 15 ENSCJAG00000083951 ##26 PPARGC1A (ENSCJAG00000013024) DHX15 (ENSCJAG00000013069) ENSCJAG00000087251 ##16 SOD3 (ENSCJAG00000013121) #7 CCDC149 (ENSCJAG00000013127) #9 LGI2 (ENSCJAG00000042679) #10 SEPSECS (ENSCJAG00000013178) #11 ANAPC4 (ENSCJAG00000013271) #15 ENSCJAG00000084062 ##29 SLC34A2 (ENSCJAG00000013366) #18 SEL1L3 (ENSCJAG00000021061) #19 SMIM20 (ENSCJAG00000081638) #20 ENSCJAG00000063163 ##8 ENSCJAG00000086596 RBPJ (ENSCJAG00000021033) #22 CCKAR (ENSCJAG00000083281) #23 TBC1D19 (ENSCJAG00000021004) #24 ENSCJAG00000067085 STIM2 (ENSCJAG00000020997) #25 PCDH7 (ENSCJAG00000020994) #28 ENSCJAG00000085279 ENSCJAG00000075802 ENSCJAG00000082827 ##16 ENSCJAG00000070181 ##16 ENSCJAG00000078636 ARAP2 (ENSCJAG00000020975) #37 DTHD1 (ENSCJAG00000020974) ENSCJAG00000081599 ##8 NWD2 (ENSCJAG00000020972) C4orf19 (ENSCJAG00000020970) Cebidae_a ANCESTRAL SPECIES 34 ENSGT00940000158985.c ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.e ENSGT00390000009693.p.b ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 Bolivian squirrel monkey MODERN SPECIES 65 ADGRA3 (ENSSBOG00000006417) GBA3 (ENSSBOG00000032739) PPARGC1A (ENSSBOG00000006423) DHX15 (ENSSBOG00000022126) ENSSBOG00000030054 SOD3 (ENSSBOG00000003134) #7 CCDC149 (ENSSBOG00000034478) #9 LGI2 (ENSSBOG00000033943) #10 SEPSECS (ENSSBOG00000023218) #11 PI4K2B (ENSSBOG00000030108) #12 ZCCHC4 (ENSSBOG00000020855) #14 ANAPC4 (ENSSBOG00000025712) #15 SLC34A2 (ENSSBOG00000023680) #18 SEL1L3 (ENSSBOG00000031484) #19 ENSSBOG00000022950 #20 RBPJ (ENSSBOG00000024531) #22 CCKAR (ENSSBOG00000028673) #23 TBC1D19 (ENSSBOG00000030316) #24 STIM2 (ENSSBOG00000030023) #25 PCDH7 (ENSSBOG00000011267) #28 ENSSBOG00000030688 ARAP2 (ENSSBOG00000023662) #37 DTHD1 (ENSSBOG00000034010) NWD2 (ENSSBOG00000028289) C4orf19 (ENSSBOG00000034925) RELL1 (ENSSBOG00000022983) PGM2 (ENSSBOG00000025985) TBC1D1 (ENSSBOG00000035438) ENSSBOG00000033413 KLF3 (ENSSBOG00000005401) FAM114A1 (ENSSBOG00000025532) Capuchin MODERN SPECIES 333 SEL1L3 (ENSCCAG00000028947) #19 SMIM20 (ENSCCAG00000037080) #20 RBPJ (ENSCCAG00000032952) #22 CCKAR (ENSCCAG00000020355) #23 TBC1D19 (ENSCCAG00000021726) #24 STIM2 (ENSCCAG00000021839) #25 Tarsier DUPLICATION Tarsier MODERN SPECIES 7054 ENSTSYG00000027783 #22 MAGI1 (ENSTSYG00000007911) SLC25A26 (ENSTSYG00000032957) LRIG1 (ENSTSYG00000011778) KBTBD8 (ENSTSYG00000000350) ENSTSYG00000002336 Tarsier MODERN SPECIES 3892 RBPJ (ENSTSYG00000001894) #22 CCKAR (ENSTSYG00000028993) #23 Strepsirrhini ANCESTRAL SPECIES 46 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Bushbaby MODERN SPECIES 184 ENSOGAG00000034271 GBA3 (ENSOGAG00000004907) PPARGC1A (ENSOGAG00000014559) ENSOGAG00000007593 ENSOGAG00000029820 CCDC149 (ENSOGAG00000007602) #9 LGI2 (ENSOGAG00000025923) #10 SEPSECS (ENSOGAG00000008524) #11 ENSOGAG00000033259 ENSOGAG00000024400 PI4K2B (ENSOGAG00000029591) #12 ZCCHC4 (ENSOGAG00000002064) #14 ANAPC4 (ENSOGAG00000002068) #15 SLC34A2 (ENSOGAG00000006413) #18 SEL1L3 (ENSOGAG00000006417) #19 RBPJ (ENSOGAG00000007913) #22 CCKAR (ENSOGAG00000028711) #23 TBC1D19 (ENSOGAG00000008054) #24 STIM2 (ENSOGAG00000001870) #25 Lemuriformes ANCESTRAL SPECIES 62 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Mouse lemur MODERN SPECIES 26 ADGRA3 (ENSMICG00000003022) GBA3 (ENSMICG00000017466) PPARGC1A (ENSMICG00000015390) ENSMICG00000045337 DHX15 (ENSMICG00000015414) CCDC149 (ENSMICG00000017475) #9 LGI2 (ENSMICG00000002206) #10 SEPSECS (ENSMICG00000028863) #11 PI4K2B (ENSMICG00000017176) #12 ZCCHC4 (ENSMICG00000017179) #14 ANAPC4 (ENSMICG00000017188) #15 ENSMICG00000033125 SLC34A2 (ENSMICG00000045359) #18 SEL1L3 (ENSMICG00000017216) #19 SMIM20 (ENSMICG00000017222) #20 RBPJ (ENSMICG00000016014) #22 CCKAR (ENSMICG00000016023) #23 TBC1D19 (ENSMICG00000015879) #24 STIM2 (ENSMICG00000005093) #25 ENSMICG00000032983 PCDH7 (ENSMICG00000028654) #28 ENSMICG00000029850 ENSMICG00000034379 #30 ENSMICG00000048142 ENSMICG00000030890 ARAP2 (ENSMICG00000016496) #37 DTHD1 (ENSMICG00000016515) ENSMICG00000042181 ENSMICG00000046422 ENSMICG00000037614 NWD2 (ENSMICG00000015234) Lemuriformes_a ANCESTRAL SPECIES 192 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Greater bamboo lemur MODERN SPECIES 645 SEL1L3 (ENSPSMG00000004418) #19 RBPJ (ENSPSMG00000004547) #22 CCKAR (ENSPSMG00000004592) #23 TBC1D19 (ENSPSMG00000004674) #24 STIM2 (ENSPSMG00000004771) #25 Coquerels sifaka MODERN SPECIES 979 ADGRA3 (ENSPCOG00000026249) ENSPCOG00000013452 PPARGC1A (ENSPCOG00000022858) ENSPCOG00000019130 DHX15 (ENSPCOG00000016858) CCDC149 (ENSPCOG00000021677) #9 LGI2 (ENSPCOG00000019962) #10 SEPSECS (ENSPCOG00000027479) #11 PI4K2B (ENSPCOG00000025453) #12 ZCCHC4 (ENSPCOG00000019530) #14 ANAPC4 (ENSPCOG00000019322) #15 SLC34A2 (ENSPCOG00000001661) #18 SEL1L3 (ENSPCOG00000008204) #19 SMIM20 (ENSPCOG00000020751) #20 RBPJ (ENSPCOG00000014943) #22 CCKAR (ENSPCOG00000022459) #23 TBC1D19 (ENSPCOG00000027578) #24 ENSPCOG00000015580 #25 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT01040000242873 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Tree shrew MODERN SPECIES 8110 RBPJ (ENSTBEG00000002676) #22 Glires ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Rodentia DUPLICATION Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Degu MODERN SPECIES 60 ENSODEG00000008774 PUM2 (ENSODEG00000007823) ENSODEG00000010362 RHOB (ENSODEG00000019841) HS1BP3 (ENSODEG00000010003) GDF7 (ENSODEG00000008847) ENSODEG00000008523 APOB (ENSODEG00000008337) ENSODEG00000019494 ENSODEG00000007994 ENSODEG00000019450 ENSODEG00000007428 KLHL29 (ENSODEG00000009928) ENSODEG00000008786 ENSODEG00000009834 ENSODEG00000008643 #22 ENSODEG00000007644 ENSODEG00000007455 ENSODEG00000008882 ENSODEG00000010244 SF3B6 (ENSODEG00000009547) ENSODEG00000007981 PFN4 (ENSODEG00000008303) ENSODEG00000007545 ENSODEG00000007584 NCOA1 (ENSODEG00000008181) PTRHD1 (ENSODEG00000007805) ADCY3 (ENSODEG00000007982) DNAJC27 (ENSODEG00000007488) EFR3B (ENSODEG00000007566) POMC (ENSODEG00000010910) Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000010031 ENSHGLG00000040318 CCP110 (ENSHGLG00000018807) VPS35L (ENSHGLG00000018818) KNOP1 (ENSHGLG00000049260) IQCK (ENSHGLG00000014331) ENSHGLG00000049053 GPR139 (ENSHGLG00000034334) ENSHGLG00000050561 ENSHGLG00000009974 UMOD (ENSHGLG00000006685) PDILT (ENSHGLG00000008450) ACSM5 (ENSHGLG00000010732) ENSHGLG00000011441 ENSHGLG00000037112 ENSHGLG00000012971 #22 ENSHGLG00000006014 ENSHGLG00000049216 ENSHGLG00000007282 ENSHGLG00000049148 ENSHGLG00000007912 BFAR (ENSHGLG00000008907) PARN (ENSHGLG00000010886) MRTFB (ENSHGLG00000019009) ENSHGLG00000049641 ERCC4 (ENSHGLG00000016661) ENSHGLG00000017807 ENSHGLG00000035327 SHISA9 (ENSHGLG00000013207) CPPED1 (ENSHGLG00000011022) SNX29 (ENSHGLG00000012310) Rodentia_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Muroidea ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1885 Apobec1 (ENSNGAG00000022607) Gdf3 (ENSNGAG00000018140) ENSNGAG00000011538 Slc2a3 (ENSNGAG00000012042) Foxj2 (ENSNGAG00000017980) C3ar1 (ENSNGAG00000014090) Necap1 (ENSNGAG00000015511) Clec4a1 (ENSNGAG00000023338) ENSNGAG00000023388 ENSNGAG00000009568 Clec4n (ENSNGAG00000022656) Clec4d (ENSNGAG00000003581) Clec4e (ENSNGAG00000010318) Cd163 (ENSNGAG00000004434) ENSNGAG00000023205 ENSNGAG00000023425 #22 Pex5 (ENSNGAG00000022852) Clstn3 (ENSNGAG00000022664) ENSNGAG00000018451 C1rl (ENSNGAG00000023384) ENSNGAG00000021958 ENSNGAG00000019975 Lpcat3 (ENSNGAG00000019456) Emg1 (ENSNGAG00000022592) ENSNGAG00000023489 Ptpn6 (ENSNGAG00000006668) Grcc10 (ENSNGAG00000015624) Atn1 (ENSNGAG00000003346) Eno2 (ENSNGAG00000019726) Lrrc23 (ENSNGAG00000023434) ENSNGAG00000019265 Upper Galilee mountains blind mole rat MODERN SPECIES 1012 ENSNGAG00000020113 ENSNGAG00000019133 #22 ENSNGAG00000001446 Pcdh10 (ENSNGAG00000014347) Pabpc4l (ENSNGAG00000001502) Pcdh18 (ENSNGAG00000002486) Slc7a11 (ENSNGAG00000012488) Muroidea_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Cricetidae ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a #22 Prairie vole MODERN SPECIES 147 ENSMOCG00000001414 ENSMOCG00000000686 ENSMOCG00000000319 #22 ENSMOCG00000000225 ENSMOCG00000022343 Tmem47 (ENSMOCG00000000092) Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.b #22 Naked mole-rat female MODERN SPECIES 3 TRPM3 (ENSHGLG00000009801) ENSHGLG00000034795 ENSHGLG00000003100 TMEM2 (ENSHGLG00000013965) ABHD17B (ENSHGLG00000032723) ENSHGLG00000015860 ENSHGLG00000044859 ENSHGLG00000013674 GDA (ENSHGLG00000012950) ENSHGLG00000041124 ENSHGLG00000033487 TMC1 (ENSHGLG00000015834) ENSHGLG00000036208 ENSHGLG00000037149 ENSHGLG00000000865 ENSHGLG00000034386 #22 ENSHGLG00000001938 ALDH1A1 (ENSHGLG00000010105) ANXA1 (ENSHGLG00000000400) ENSHGLG00000047470 ENSHGLG00000031934 RORB (ENSHGLG00000000695) ENSHGLG00000040715 TRPM6 (ENSHGLG00000003851) C9orf40 (ENSHGLG00000000280) ENSHGLG00000050025 ENSHGLG00000033948 CARNMT1 (ENSHGLG00000000378) ENSHGLG00000002210 ENSHGLG00000044788 ENSHGLG00000049071 Rodentia ANCESTRAL SPECIES 13 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Kangaroo rat MODERN SPECIES 327 Kcnip4 (ENSDORG00000015626) ENSDORG00000024508 Adgra3 (ENSDORG00000007520) ENSDORG00000011391 Ppargc1a (ENSDORG00000016276) Dhx15 (ENSDORG00000013848) Ccdc149 (ENSDORG00000005628) #9 Lgi2 (ENSDORG00000005632) #10 Sepsecs (ENSDORG00000012655) #11 Pi4k2b (ENSDORG00000000491) #12 ENSDORG00000012901 #14 ENSDORG00000025086 Slc34a2 (ENSDORG00000016105) #18 Sel1l3 (ENSDORG00000011773) #19 Smim20 (ENSDORG00000028531) #20 Rbpj (ENSDORG00000006352) #22 Cckar (ENSDORG00000006353) #23 Tbc1d19 (ENSDORG00000013790) #24 Stim2 (ENSDORG00000016610) #25 ENSDORG00000028755 #25 ENSDORG00000008260 Pcdh7 (ENSDORG00000029117) #28 ENSDORG00000028110 Arap2 (ENSDORG00000008160) #37 Dthd1 (ENSDORG00000001578) Nwd2 (ENSDORG00000023758) 0610040J01Rik (ENSDORG00000011992) Rell1 (ENSDORG00000008354) Pgm2 (ENSDORG00000027647) Tbc1d1 (ENSDORG00000010269) Klf3 (ENSDORG00000023213) Myomorpha ANCESTRAL SPECIES 19 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Lesser Egyptian jerboa MODERN SPECIES 58 Adgra3 (ENSJJAG00000000786) ENSJJAG00000023479 ENSJJAG00000018377 Dhx15 (ENSJJAG00000010364) ENSJJAG00000010774 Sod3 (ENSJJAG00000019475) #7 Ccdc149 (ENSJJAG00000016740) #9 Lgi2 (ENSJJAG00000021018) #10 Sepsecs (ENSJJAG00000001251) #11 Pi4k2b (ENSJJAG00000021578) #12 Zcchc4 (ENSJJAG00000016627) #14 ENSJJAG00000023054 #15 Slc34a2 (ENSJJAG00000023515) #18 Sel1l3 (ENSJJAG00000018980) #19 Smim20 (ENSJJAG00000020734) #20 Rbpj (ENSJJAG00000024408) #22 Cckar (ENSJJAG00000009819) #23 Tbc1d19 (ENSJJAG00000015623) #24 Stim2 (ENSJJAG00000014478) #25 ENSJJAG00000011152 ENSJJAG00000011305 ENSJJAG00000024218 Pcdh7 (ENSJJAG00000021210) #28 Arap2 (ENSJJAG00000009614) #37 Dthd1 (ENSJJAG00000013536) Nwd2 (ENSJJAG00000011338) Rell1 (ENSJJAG00000015408) Muroidea ANCESTRAL SPECIES 17 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Upper Galilee mountains blind mole rat MODERN SPECIES 986 Adgra3 (ENSNGAG00000012199) ENSNGAG00000014375 Ppargc1a (ENSNGAG00000015090) Dhx15 (ENSNGAG00000016196) Sod3 (ENSNGAG00000017105) #7 Ccdc149 (ENSNGAG00000017784) #9 Lgi2 (ENSNGAG00000018556) #10 Sepsecs (ENSNGAG00000000721) #11 Pi4k2b (ENSNGAG00000001252) #12 Zcchc4 (ENSNGAG00000015745) #14 ENSNGAG00000018886 ENSNGAG00000019141 Slc34a2 (ENSNGAG00000000788) #18 Sel1l3 (ENSNGAG00000008965) #19 Smim20 (ENSNGAG00000009723) #20 Rbpj (ENSNGAG00000013338) #22 ENSNGAG00000021067 Cckar (ENSNGAG00000021342) #23 Tbc1d19 (ENSNGAG00000000629) #24 ENSNGAG00000007794 Stim2 (ENSNGAG00000016987) #25 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Murinae ANCESTRAL SPECIES 12 ENSGT00940000160460 ENSGT01100000263543.a ENSGT01100000263511.b.a.b.a.a ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Rat DUPLICATION Rat MODERN SPECIES 5 ENSRNOG00000067137 Ppargc1a (ENSRNOG00000004473) Dhx15 (ENSRNOG00000003844) Sod3 (ENSRNOG00000003869) #7 ENSRNOG00000064588 Ccdc149 (ENSRNOG00000024454) #9 Lgi2 (ENSRNOG00000066201) #10 Sepsecs (ENSRNOG00000049244) #11 Pi4k2b (ENSRNOG00000003924) #12 Zcchc4 (ENSRNOG00000029064) #14 Anapc4 (ENSRNOG00000004130) #15 Slc34a2 (ENSRNOG00000004626) #18 Sel1l3 (ENSRNOG00000004932) #19 AABR07015507.1 (ENSRNOG00000051190) LOC100361259 (ENSRNOG00000055911) Rbpj (ENSRNOG00000046327) #22 Cckar (ENSRNOG00000043124) #23 Tbc1d19 (ENSRNOG00000003003) #24 Stim2 (ENSRNOG00000002956) #25 ENSRNOG00000067114 Pcdh7 (ENSRNOG00000012367) Pcdh7 (ENSRNOG00000063828) #28 ENSRNOG00000067336 AABR07015346.1 (ENSRNOG00000027791) ENSRNOG00000065159 LOC108348204 (ENSRNOG00000063351) ENSRNOG00000065472 Arap2 (ENSRNOG00000056826) #37 AABR07015180.1 (ENSRNOG00000026134) Nwd2 (ENSRNOG00000051837) LOC498368 (ENSRNOG00000002191) Rat MODERN SPECIES 15 Eloc (ENSRNOG00000031730) Ube2w (ENSRNOG00000062415) AABR07046707.1 (ENSRNOG00000042458) ENSRNOG00000069669 Rdh10 (ENSRNOG00000006681) LOC100912291 (ENSRNOG00000047310) LOC297756 (ENSRNOG00000007238) Sbspon (ENSRNOG00000007258) Terf1 (ENSRNOG00000007291) AC125757.1 (ENSRNOG00000028991) AABR07047316.1 (ENSRNOG00000062174) ENSRNOG00000067608 Trpa1 (ENSRNOG00000007354) Msc (ENSRNOG00000007540) Eya1 (ENSRNOG00000007590) Rbpjl2 (ENSRNOG00000007797) #22 Xkr9 (ENSRNOG00000040289) Lactb2 (ENSRNOG00000007829) Tram1 (ENSRNOG00000007892) Ncoa2 (ENSRNOG00000007975) AABR07046763.1 (ENSRNOG00000059973) Prdm14 (ENSRNOG00000021792) Slco5a1 (ENSRNOG00000008966) Sulf1 (ENSRNOG00000009037) RGD1564053 (ENSRNOG00000005375) Prex2 (ENSRNOG00000005391) Cpa6 (ENSRNOG00000005655) Arfgef1 (ENSRNOG00000005703) Cspp1 (ENSRNOG00000021718) Cops5 (ENSRNOG00000006499) Tcf24 (ENSRNOG00000052668) Mus ANCESTRAL SPECIES 14 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00530000063435.a.p ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Shrew mouse MODERN SPECIES 4 Kcnip4 (MGP_PahariEiJ_G0016992) MGP_PahariEiJ_G0016993 Adgra3 (MGP_PahariEiJ_G0016994) Ppargc1a (MGP_PahariEiJ_G0016995) Dhx15 (MGP_PahariEiJ_G0016996) Sod3 (MGP_PahariEiJ_G0016997) #7 Ccdc149 (MGP_PahariEiJ_G0016998) #9 Lgi2 (MGP_PahariEiJ_G0016999) #10 Sepsecs (MGP_PahariEiJ_G0017000) #11 Pi4k2b (MGP_PahariEiJ_G0017001) #12 Zcchc4 (MGP_PahariEiJ_G0017002) #14 Anapc4 (MGP_PahariEiJ_G0017003) #15 Slc34a2 (MGP_PahariEiJ_G0017004) #18 Sel1l3 (MGP_PahariEiJ_G0017005) #19 Smim20 (MGP_PahariEiJ_G0017006) #20 Rbpj (MGP_PahariEiJ_G0017007) #22 Cckar (MGP_PahariEiJ_G0017008) #23 Tbc1d19 (MGP_PahariEiJ_G0017009) #24 Stim2 (MGP_PahariEiJ_G0017010) #25 Pcdh7 (MGP_PahariEiJ_G0017011) #28 G6pd2 (MGP_PahariEiJ_G0017012) Arap2 (MGP_PahariEiJ_G0017013) #37 Dthd1 (MGP_PahariEiJ_G0017014) Nwd2 (MGP_PahariEiJ_G0017015) 0610040J01Rik (MGP_PahariEiJ_G0017016) Rell1 (MGP_PahariEiJ_G0017017) Pgm2 (MGP_PahariEiJ_G0017018) Tbc1d1 (MGP_PahariEiJ_G0017019) Klf3 (MGP_PahariEiJ_G0017020) Tlr1 (MGP_PahariEiJ_G0017021) Tlr6 (MGP_PahariEiJ_G0017022) Mus_A ANCESTRAL SPECIES 6 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00530000063435.a.p ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Ryukyu mouse MODERN SPECIES 14 Kcnip4 (MGP_CAROLIEiJ_G0027210) MGP_CAROLIEiJ_G0027211 Adgra3 (MGP_CAROLIEiJ_G0027212) Ppargc1a (MGP_CAROLIEiJ_G0027213) Dhx15 (MGP_CAROLIEiJ_G0027214) Sod3 (MGP_CAROLIEiJ_G0027215) #7 Ccdc149 (MGP_CAROLIEiJ_G0027216) #9 Lgi2 (MGP_CAROLIEiJ_G0027217) #10 Sepsecs (MGP_CAROLIEiJ_G0027218) #11 Pi4k2b (MGP_CAROLIEiJ_G0027219) #12 Zcchc4 (MGP_CAROLIEiJ_G0027220) #14 Anapc4 (MGP_CAROLIEiJ_G0027221) #15 Slc34a2 (MGP_CAROLIEiJ_G0027222) #18 Sel1l3 (MGP_CAROLIEiJ_G0027223) #19 Smim20 (MGP_CAROLIEiJ_G0027224) #20 MGP_CAROLIEiJ_G0027225 #22 Cckar (MGP_CAROLIEiJ_G0027226) #23 Tbc1d19 (MGP_CAROLIEiJ_G0027227) #24 Stim2 (MGP_CAROLIEiJ_G0027228) #25 Pcdh7 (MGP_CAROLIEiJ_G0027229) #28 G6pd2 (MGP_CAROLIEiJ_G0027230) Arap2 (MGP_CAROLIEiJ_G0027231) #37 Dthd1 (MGP_CAROLIEiJ_G0027232) Nwd2 (MGP_CAROLIEiJ_G0027233) 0610040J01Rik (MGP_CAROLIEiJ_G0027234) Rell1 (MGP_CAROLIEiJ_G0027235) Pgm2 (MGP_CAROLIEiJ_G0027236) MGP_CAROLIEiJ_G0027237 Klf3 (MGP_CAROLIEiJ_G0027238) Tlr1 (MGP_CAROLIEiJ_G0027239) Tlr6 (MGP_CAROLIEiJ_G0027240) Mus_B ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00530000063435.a.p ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Mouse MODERN SPECIES 14 5730480H06Rik (ENSMUSG00000029089) Kcnip4 (ENSMUSG00000029088) Adgra3 (ENSMUSG00000029090) Ppargc1a (ENSMUSG00000029167) Dhx15 (ENSMUSG00000029169) Sod3 (ENSMUSG00000072941) #7 Ccdc149 (ENSMUSG00000045790) #9 Lgi2 (ENSMUSG00000039252) #10 Sepsecs (ENSMUSG00000029173) #11 Pi4k2b (ENSMUSG00000029186) #12 Zcchc4 (ENSMUSG00000029179) #14 Anapc4 (ENSMUSG00000029176) #15 Slc34a2 (ENSMUSG00000029188) #18 Sel1l3 (ENSMUSG00000029189) #19 Smim20 (ENSMUSG00000061461) #20 Rbpj (ENSMUSG00000039191) #22 Cckar (ENSMUSG00000029193) #23 Tbc1d19 (ENSMUSG00000039178) #24 Stim2 (ENSMUSG00000039156) #25 Pcdh7 (ENSMUSG00000029108) #28 G6pd2 (ENSMUSG00000089992) Arap2 (ENSMUSG00000037999) #37 Dthd1 (ENSMUSG00000090326) Nwd2 (ENSMUSG00000090061) 0610040J01Rik (ENSMUSG00000060512) Rell1 (ENSMUSG00000047881) Pgm2 (ENSMUSG00000029171) Tbc1d1 (ENSMUSG00000029174) Klf3 (ENSMUSG00000029178) Tlr1 (ENSMUSG00000044827) Tlr6 (ENSMUSG00000051498) Mus_C ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00530000063435.a.p ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00940000162201 Steppe mouse MODERN SPECIES 3046 Slc34a2 (ENSMSIG00000006630) #18 Sel1l3 (ENSMSIG00000006452) #19 Smim20 (ENSMSIG00000006400) #20 Rbpj (ENSMSIG00000006294) #22 Cckar (ENSMSIG00000006255) #23 Tbc1d19 (ENSMSIG00000006182) #24 Stim2 (ENSMSIG00000006059) #25 spretus MODERN SPECIES 14 5730480H06Rik (MGP_SPRETEiJ_G0028205) Kcnip4 (MGP_SPRETEiJ_G0028206) Adgra3 (MGP_SPRETEiJ_G0028207) Ppargc1a (MGP_SPRETEiJ_G0028208) Dhx15 (MGP_SPRETEiJ_G0028209) Sod3 (MGP_SPRETEiJ_G0028210) #7 Ccdc149 (MGP_SPRETEiJ_G0028211) #9 Lgi2 (MGP_SPRETEiJ_G0028212) #10 Sepsecs (MGP_SPRETEiJ_G0028213) #11 Pi4k2b (MGP_SPRETEiJ_G0028214) #12 Zcchc4 (MGP_SPRETEiJ_G0028215) #14 Anapc4 (MGP_SPRETEiJ_G0028216) #15 Slc34a2 (MGP_SPRETEiJ_G0028217) #18 Sel1l3 (MGP_SPRETEiJ_G0028218) #19 Smim20 (MGP_SPRETEiJ_G0028219) #20 MGP_SPRETEiJ_G0028220 #22 Cckar (MGP_SPRETEiJ_G0028221) #23 Tbc1d19 (MGP_SPRETEiJ_G0028222) #24 Stim2 (MGP_SPRETEiJ_G0028223) #25 Pcdh7 (MGP_SPRETEiJ_G0028224) #28 G6pd2 (MGP_SPRETEiJ_G0028225) Arap2 (MGP_SPRETEiJ_G0028226) #37 Dthd1 (MGP_SPRETEiJ_G0028227) Nwd2 (MGP_SPRETEiJ_G0028228) 0610040J01Rik (MGP_SPRETEiJ_G0028229) Rell1 (MGP_SPRETEiJ_G0028230) Pgm2 (MGP_SPRETEiJ_G0028231) Tbc1d1 (MGP_SPRETEiJ_G0028232) Klf3 (MGP_SPRETEiJ_G0028233) Tlr6 (MGP_SPRETEiJ_G0028235) Fam114a1 (MGP_SPRETEiJ_G0028236) Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162884 ENSGT00390000010054.b Northern American deer mouse MODERN SPECIES 1 Adgra3 (ENSPEMG00000017979) ENSPEMG00000009892 Ppargc1a (ENSPEMG00000010892) Dhx15 (ENSPEMG00000012226) Sod3 (ENSPEMG00000028688) #7 Ccdc149 (ENSPEMG00000012229) #9 Lgi2 (ENSPEMG00000011026) #10 Sepsecs (ENSPEMG00000006742) #11 Pi4k2b (ENSPEMG00000007793) #12 Zcchc4 (ENSPEMG00000013522) #14 ENSPEMG00000029080 Anapc4 (ENSPEMG00000014070) #15 Slc34a2 (ENSPEMG00000007479) #18 Sel1l3 (ENSPEMG00000020373) #19 Smim20 (ENSPEMG00000030098) #20 Rbpj (ENSPEMG00000010386) #22 Cckar (ENSPEMG00000025192) #23 Tbc1d19 (ENSPEMG00000010326) #24 Stim2 (ENSPEMG00000013752) #25 ENSPEMG00000008427 Pcdh7 (ENSPEMG00000012079) #28 ENSPEMG00000025746 ENSPEMG00000026158 ENSPEMG00000029628 ENSPEMG00000014650 ENSPEMG00000029590 Arap2 (ENSPEMG00000017210) #37 Dthd1 (ENSPEMG00000018338) Nwd2 (ENSPEMG00000018695) 0610040J01Rik (ENSPEMG00000018765) Rell1 (ENSPEMG00000019052) Prairie vole MODERN SPECIES 349 ENSMOCG00000004401 ENSMOCG00000015030 Vwc2 (ENSMOCG00000022092) Zpbp (ENSMOCG00000005757) Spata48 (ENSMOCG00000014867) Ikzf1 (ENSMOCG00000003097) Fignl1 (ENSMOCG00000010841) Ddc (ENSMOCG00000014117) Grb10 (ENSMOCG00000013383) Cobl (ENSMOCG00000016899) ENSMOCG00000001123 ENSMOCG00000001110 Slc34a2 (ENSMOCG00000000230) #18 Sel1l3 (ENSMOCG00000013009) #19 Smim20 (ENSMOCG00000017669) #20 ENSMOCG00000018816 #22 Cckar (ENSMOCG00000004693) #23 Tbc1d19 (ENSMOCG00000013897) #24 Stim2 (ENSMOCG00000017892) #25 ENSMOCG00000000264 ENSMOCG00000004908 ENSMOCG00000017801 Pcdh7 (ENSMOCG00000019554) #28 ENSMOCG00000016594 ENSMOCG00000017532 Arap2 (ENSMOCG00000008948) #37 Dthd1 (ENSMOCG00000019885) Nwd2 (ENSMOCG00000002726) ENSMOCG00000004195 0610040J01Rik (ENSMOCG00000010145) Rell1 (ENSMOCG00000013662) Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Golden Hamster MODERN SPECIES 632 ENSMAUG00000007284 Adgra3 (ENSMAUG00000012066) ENSMAUG00000007935 ENSMAUG00000006861 Ppargc1a (ENSMAUG00000011811) Dhx15 (ENSMAUG00000011535) Ccdc149 (ENSMAUG00000001813) #9 Lgi2 (ENSMAUG00000020219) #10 Sepsecs (ENSMAUG00000002352) #11 Pi4k2b (ENSMAUG00000015492) #12 Zcchc4 (ENSMAUG00000017115) #14 Anapc4 (ENSMAUG00000015911) #15 Slc34a2 (ENSMAUG00000016072) #18 Sel1l3 (ENSMAUG00000009548) #19 Smim20 (ENSMAUG00000016115) #20 Rbpj (ENSMAUG00000020612) #22 Cckar (ENSMAUG00000020673) #23 Tbc1d19 (ENSMAUG00000018698) #24 Stim2 (ENSMAUG00000018372) #25 Chinese hamster chok1gshd MODERN SPECIES 44 ENSCGRG00001005713 Ppargc1a (ENSCGRG00001015534) Dhx15 (ENSCGRG00001023527) Sod3 (ENSCGRG00001009531) #7 Ccdc149 (ENSCGRG00001001092) #9 Lgi2 (ENSCGRG00001010617) #10 Sepsecs (ENSCGRG00001023389) #11 Pi4k2b (ENSCGRG00001005696) #12 Zcchc4 (ENSCGRG00001014205) #14 ENSCGRG00001016709 Anapc4 (ENSCGRG00001021562) #15 Slc34a2 (ENSCGRG00001019379) #18 Sel1l3 (ENSCGRG00001023792) #19 Smim20 (ENSCGRG00001010352) #20 ENSCGRG00001010832 Rbpj (ENSCGRG00001016640) #22 Cckar (ENSCGRG00001015331) #23 Tbc1d19 (ENSCGRG00001021066) #24 ENSCGRG00001004312 Stim2 (ENSCGRG00001012517) #25 ENSCGRG00001002941 ENSCGRG00001005160 ENSCGRG00001012415 Pcdh7 (ENSCGRG00001017637) #28 ENSCGRG00001018983 ENSCGRG00001009672 Arap2 (ENSCGRG00001019683) #37 Dthd1 (ENSCGRG00001007560) ENSCGRG00001015981 ENSCGRG00001005701 Nwd2 (ENSCGRG00001014796) Rodentia_A ANCESTRAL SPECIES 20 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Sciuridae ANCESTRAL SPECIES 19 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Eurasian red squirrel MODERN SPECIES 18 KCNIP4 (ENSSVLG00005015491) ADGRA3 (ENSSVLG00005015123) GBA3 (ENSSVLG00005014999) PPARGC1A (ENSSVLG00005014549) ENSSVLG00005014421 SOD3 (ENSSVLG00005014382) #7 CCDC149 (ENSSVLG00005013936) #9 LGI2 (ENSSVLG00005013643) #10 SEPSECS (ENSSVLG00005013560) #11 ENSSVLG00005013482 #12 ZCCHC4 (ENSSVLG00005013382) #14 ANAPC4 (ENSSVLG00005013305) #15 SLC34A2 (ENSSVLG00005013163) #18 SEL1L3 (ENSSVLG00005012722) #19 SMIM20 (ENSSVLG00005012667) #20 RBPJ (ENSSVLG00005012303) #22 CCKAR (ENSSVLG00005012173) #23 TBC1D19 (ENSSVLG00005011905) #24 ENSSVLG00005011823 STIM2 (ENSSVLG00005011778) #25 ENSSVLG00005011737 ENSSVLG00005011695 ENSSVLG00005011631 ENSSVLG00005011572 PCDH7 (ENSSVLG00005011515) #28 ENSSVLG00005011423 ARAP2 (ENSSVLG00005010880) #37 DTHD1 (ENSSVLG00005010509) ENSSVLG00005010441 ENSSVLG00005010374 C4orf19 (ENSSVLG00005010352) Marmotini ANCESTRAL SPECIES 26 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800.e ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00900000143434 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Alpin marmot MODERN SPECIES 9 KCNIP4 (ENSMMMG00000017078) ADGRA3 (ENSMMMG00000017146) GBA3 (ENSMMMG00000017174) PPARGC1A (ENSMMMG00000017190) ENSMMMG00000017220 DHX15 (ENSMMMG00000017227) CCDC149 (ENSMMMG00000017248) #9 LGI2 (ENSMMMG00000017262) #10 SEPSECS (ENSMMMG00000017270) #11 PI4K2B (ENSMMMG00000017289) #12 ZCCHC4 (ENSMMMG00000017301) #14 ANAPC4 (ENSMMMG00000017319) #15 SLC34A2 (ENSMMMG00000017344) #18 SEL1L3 (ENSMMMG00000017356) #19 SMIM20 (ENSMMMG00000017386) #20 RBPJ (ENSMMMG00000017407) #22 CCKAR (ENSMMMG00000017438) #23 STIM2 (ENSMMMG00000017470) #25 ENSMMMG00000017503 ENSMMMG00000017519 #28 ARAP2 (ENSMMMG00000017527) #37 DTHD1 (ENSMMMG00000017544) NWD2 (ENSMMMG00000017559) ENSMMMG00000017574 C4orf19 (ENSMMMG00000017577) RELL1 (ENSMMMG00000017587) PGM2 (ENSMMMG00000017606) TBC1D1 (ENSMMMG00000017620) ENSMMMG00000017716 KLF3 (ENSMMMG00000017721) TLR10 (ENSMMMG00000017725) Marmotini_b ANCESTRAL SPECIES 33 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800.e ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b.g #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Arctic ground squirrel MODERN SPECIES 9 ADGRA3 (ENSUPAG00010018174) GBA3 (ENSUPAG00010018197) PPARGC1A (ENSUPAG00010018212) ENSUPAG00010018232 DHX15 (ENSUPAG00010018237) SOD3 (ENSUPAG00010018252) #7 CCDC149 (ENSUPAG00010018257) #9 LGI2 (ENSUPAG00010018269) #10 SEPSECS (ENSUPAG00010018289) #11 PI4K2B (ENSUPAG00010018304) #12 ZCCHC4 (ENSUPAG00010018312) #14 ANAPC4 (ENSUPAG00010018324) #15 ENSUPAG00010018366 #18 SEL1L3 (ENSUPAG00010018378) #19 SMIM20 (ENSUPAG00010018408) #20 RBPJ (ENSUPAG00010018415) #22 CCKAR (ENSUPAG00010018463) #23 TBC1D19 (ENSUPAG00010018475) #24 STIM2 (ENSUPAG00010018502) #25 Squirrel MODERN SPECIES 77 PACRGL (ENSSTOG00000014307) KCNIP4 (ENSSTOG00000014315) ADGRA3 (ENSSTOG00000008272) GBA3 (ENSSTOG00000030967) PPARGC1A (ENSSTOG00000012522) ENSSTOG00000015000 ENSSTOG00000025245 #9 LGI2 (ENSSTOG00000002210) #10 SEPSECS (ENSSTOG00000013399) #11 PI4K2B (ENSSTOG00000016146) #12 ZCCHC4 (ENSSTOG00000023603) #14 ANAPC4 (ENSSTOG00000016156) #15 SLC34A2 (ENSSTOG00000012971) #18 SEL1L3 (ENSSTOG00000010415) #19 SMIM20 (ENSSTOG00000004810) #20 RBPJ (ENSSTOG00000004547) #22 CCKAR (ENSSTOG00000028796) #23 TBC1D19 (ENSSTOG00000024301) #24 STIM2 (ENSSTOG00000014072) #25 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Naked mole-rat female MODERN SPECIES 1 PPARGC1A (ENSHGLG00000007022) DHX15 (ENSHGLG00000006630) SOD3 (ENSHGLG00000047646) #7 CCDC149 (ENSHGLG00000045906) #9 LGI2 (ENSHGLG00000034196) #10 ENSHGLG00000031983 SEPSECS (ENSHGLG00000005236) #11 PI4K2B (ENSHGLG00000005194) #12 ZCCHC4 (ENSHGLG00000005154) #14 ENSHGLG00000039602 ANAPC4 (ENSHGLG00000004987) #15 SLC34A2 (ENSHGLG00000012163) #18 SEL1L3 (ENSHGLG00000011887) #19 ENSHGLG00000042802 ENSHGLG00000048407 RBPJ (ENSHGLG00000010901) #22 CCKAR (ENSHGLG00000041648) #23 TBC1D19 (ENSHGLG00000009465) #24 ENSHGLG00000009110 #25 ENSHGLG00000038509 ENSHGLG00000008412 ENSHGLG00000020704 ENSHGLG00000038050 ENSHGLG00000042856 ENSHGLG00000007929 #28 ENSHGLG00000032804 ENSHGLG00000008642 ARAP2 (ENSHGLG00000001750) #37 DTHD1 (ENSHGLG00000006344) ENSHGLG00000000242 ENSHGLG00000037767 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Guinea pig MODERN SPECIES 50 ADGRA3 (ENSCPOG00000014179) GBA3 (ENSCPOG00000024273) PPARGC1A (ENSCPOG00000001518) DHX15 (ENSCPOG00000006467) SOD3 (ENSCPOG00000035072) #7 CCDC149 (ENSCPOG00000008895) #9 LGI2 (ENSCPOG00000024161) #10 SEPSECS (ENSCPOG00000035974) #11 PI4K2B (ENSCPOG00000015398) #12 ZCCHC4 (ENSCPOG00000011477) #14 ANAPC4 (ENSCPOG00000013122) #15 SLC34A2 (ENSCPOG00000024165) #18 SEL1L3 (ENSCPOG00000001037) #19 SMIM20 (ENSCPOG00000007684) #20 ENSCPOG00000040682 RBPJ (ENSCPOG00000007041) #22 CCKAR (ENSCPOG00000007046) #23 TBC1D19 (ENSCPOG00000003940) #24 STIM2 (ENSCPOG00000003408) #25 PCDH7 (ENSCPOG00000009659) #28 ARAP2 (ENSCPOG00000003037) #37 DTHD1 (ENSCPOG00000012919) Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Degu MODERN SPECIES 47 KCNIP4 (ENSODEG00000009132) ADGRA3 (ENSODEG00000008912) GBA3 (ENSODEG00000007983) ENSODEG00000008409 ENSODEG00000008891 ENSODEG00000008421 #9 LGI2 (ENSODEG00000009206) #10 SEPSECS (ENSODEG00000010607) #11 PI4K2B (ENSODEG00000008999) #12 ENSODEG00000007449 #14 ENSODEG00000006972 ENSODEG00000019525 SLC34A2 (ENSODEG00000010839) #18 SEL1L3 (ENSODEG00000008196) #19 ENSODEG00000007321 #20 ENSODEG00000007277 #22 CCKAR (ENSODEG00000007359) #23 TBC1D19 (ENSODEG00000007019) #24 ENSODEG00000008773 #25 ENSODEG00000006518 #25 ENSODEG00000019413 ENSODEG00000006666 ENSODEG00000007600 PCDH7 (ENSODEG00000007387) #28 ENSODEG00000006993 ENSODEG00000019660 ARAP2 (ENSODEG00000006699) #37 DTHD1 (ENSODEG00000007001) Long-tailed chinchilla MODERN SPECIES 150 SEPSECS (ENSCLAG00000001790) #11 PI4K2B (ENSCLAG00000001759) #12 ZCCHC4 (ENSCLAG00000003884) #14 ANAPC4 (ENSCLAG00000003544) #15 ENSCLAG00000002958 SLC34A2 (ENSCLAG00000002636) #18 SEL1L3 (ENSCLAG00000002362) #19 SMIM20 (ENSCLAG00000002089) #20 RBPJ (ENSCLAG00000002065) #22 CCKAR (ENSCLAG00000001729) #23 TBC1D19 (ENSCLAG00000001699) #24 STIM2 (ENSCLAG00000002849) #25 PCDH7 (ENSCLAG00000002605) #28 ARAP2 (ENSCLAG00000012467) #37 DTHD1 (ENSCLAG00000011952) NWD2 (ENSCLAG00000010818) C4orf19 (ENSCLAG00000010706) RELL1 (ENSCLAG00000010401) PGM2 (ENSCLAG00000010266) TBC1D1 (ENSCLAG00000002236) KLF3 (ENSCLAG00000004459) TLR10 (ENSCLAG00000004336) TLR1 (ENSCLAG00000017579) TLR6 (ENSCLAG00000017630) Lagomorpha ANCESTRAL SPECIES 3 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Pika MODERN SPECIES 2489 SLC34A2 (ENSOPRG00000001382) #18 SEL1L3 (ENSOPRG00000001401) #19 SMIM20 (ENSOPRG00000001454) #20 RBPJ (ENSOPRG00000001466) #22 CCKAR (ENSOPRG00000001491) #23 TBC1D19 (ENSOPRG00000001504) #24 Rabbit DUPLICATION Rabbit MODERN SPECIES 11 ENSOCUG00000000919 GBA3 (ENSOCUG00000005568) PPARGC1A (ENSOCUG00000014668) DHX15 (ENSOCUG00000003026) ENSOCUG00000019163 ENSOCUG00000007460 #7 CCDC149 (ENSOCUG00000007463) #9 LGI2 (ENSOCUG00000004764) #10 SEPSECS (ENSOCUG00000008262) #11 PI4K2B (ENSOCUG00000015972) #12 ZCCHC4 (ENSOCUG00000015990) #14 ANAPC4 (ENSOCUG00000016004) #15 SLC34A2 (ENSOCUG00000002944) #18 SEL1L3 (ENSOCUG00000017195) #19 SMIM20 (ENSOCUG00000034394) #20 RBPJ (ENSOCUG00000013449) #22 CCKAR (ENSOCUG00000013457) #23 TBC1D19 (ENSOCUG00000013465) #24 STIM2 (ENSOCUG00000014185) #25 ENSOCUG00000038061 ENSOCUG00000026856 ENSOCUG00000039608 ENSOCUG00000030289 ENSOCUG00000035672 PCDH7 (ENSOCUG00000000290) #28 ENSOCUG00000023563 ENSOCUG00000010124 ENSOCUG00000036228 ARAP2 (ENSOCUG00000015669) #37 DTHD1 (ENSOCUG00000001098) NWD2 (ENSOCUG00000012238) Rabbit MODERN SPECIES 11 ENSOCUG00000022570 QPCT (ENSOCUG00000007416) PRKD3 (ENSOCUG00000007411) ENSOCUG00000007239 CEBPZ (ENSOCUG00000007230) ENSOCUG00000029893 SULT6B1 (ENSOCUG00000007229) EIF2AK2 (ENSOCUG00000007223) GPATCH11 (ENSOCUG00000007217) HEATR5B (ENSOCUG00000007205) STRN (ENSOCUG00000007258) VIT (ENSOCUG00000007249) FEZ2 (ENSOCUG00000014879) CRIM1 (ENSOCUG00000001595) ENSOCUG00000032042 ENSOCUG00000038657 #22 FAM98A (ENSOCUG00000015457) RASGRP3 (ENSOCUG00000015439) ENSOCUG00000036940 LTBP1 (ENSOCUG00000009598) TTC27 (ENSOCUG00000009586) BIRC6 (ENSOCUG00000006600) YIPF4 (ENSOCUG00000007591) SLC30A6 (ENSOCUG00000005403) ENSOCUG00000038042 SPAST (ENSOCUG00000010252) ENSOCUG00000017877 ENSOCUG00000005878 ENSOCUG00000036681 SRD5A2 (ENSOCUG00000001236) XDH (ENSOCUG00000001230) Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 ENSGT00940000157949 Eulipotyphla ANCESTRAL SPECIES 2118 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 Hedgehog MODERN SPECIES 6316 RBPJ (ENSEEUG00000009686) #22 CCKAR (ENSEEUG00000009776) #23 Common shrew MODERN SPECIES 4916 RBPJ (ENSSARG00000001169) #22 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 ENSGT00940000157949 Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 ENSGT00940000157949 Carnivora ANCESTRAL SPECIES 5 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00970000193677 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 Felidae ANCESTRAL SPECIES 4 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00970000193677 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00390000016760.c.b ENSGT00390000007888.c.b.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Cat MODERN SPECIES 235 ADGRA3 (ENSFCAG00000027302) GBA3 (ENSFCAG00000031717) PPARGC1A (ENSFCAG00000000043) ENSFCAG00000040987 DHX15 (ENSFCAG00000009234) SOD3 (ENSFCAG00000045310) #7 CCDC149 (ENSFCAG00000015383) #9 LGI2 (ENSFCAG00000032361) #10 SEPSECS (ENSFCAG00000023094) #11 PI4K2B (ENSFCAG00000025109) #12 ZCCHC4 (ENSFCAG00000023396) #14 ANAPC4 (ENSFCAG00000042946) #15 SLC34A2 (ENSFCAG00000029965) #18 SEL1L3 (ENSFCAG00000013720) #19 SMIM20 (ENSFCAG00000046718) #20 RBPJ (ENSFCAG00000030363) #22 CCKAR (ENSFCAG00000007718) #23 CAR1 (ENSFCAG00000049200) ENSFCAG00000028607 TBC1D19 (ENSFCAG00000029340) #24 STIM2 (ENSFCAG00000025940) #25 PCDH7 (ENSFCAG00000014975) #28 ENSFCAG00000032725 #30 ENSFCAG00000052913 ENSFCAG00000048265 ENSFCAG00000033885 ARAP2 (ENSFCAG00000004726) #37 DTHD1 (ENSFCAG00000014534) NWD2 (ENSFCAG00000031252) ENSFCAG00000050369 CB1H4orf19 (ENSFCAG00000000031) Panthera ANCESTRAL SPECIES 5 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00970000193677 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00390000016760.c.b ENSGT00390000007888.c.b.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 Tiger MODERN SPECIES 349 DHX15 (ENSPTIG00000010037) CCDC149 (ENSPTIG00000009661) #9 LGI2 (ENSPTIG00000009350) #10 SEPSECS (ENSPTIG00000009229) #11 PI4K2B (ENSPTIG00000008971) #12 ZCCHC4 (ENSPTIG00000008749) #14 ANAPC4 (ENSPTIG00000008519) #15 SLC34A2 (ENSPTIG00000008160) #18 SEL1L3 (ENSPTIG00000007261) #19 ENSPTIG00000007083 RBPJ (ENSPTIG00000006126) #22 CCKAR (ENSPTIG00000005490) #23 ENSPTIG00000005280 TBC1D19 (ENSPTIG00000002885) #24 STIM2 (ENSPTIG00000001265) #25 Panthera_a ANCESTRAL SPECIES 2 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00970000193677 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00390000016760.c.b ENSGT00390000007888.c.b.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 leopard MODERN SPECIES 25 GBA3 (ENSPPRG00000000195) PPARGC1A (ENSPPRG00000001711) ENSPPRG00000020851 DHX15 (ENSPPRG00000002164) SOD3 (ENSPPRG00000020880) #7 CCDC149 (ENSPPRG00000005074) #9 LGI2 (ENSPPRG00000005473) #10 SEPSECS (ENSPPRG00000005618) #11 PI4K2B (ENSPPRG00000006151) #12 ZCCHC4 (ENSPPRG00000006329) #14 ANAPC4 (ENSPPRG00000006664) #15 SLC34A2 (ENSPPRG00000008628) #18 ENSPPRG00000009004 SEL1L3 (ENSPPRG00000018369) #19 SMIM20 (ENSPPRG00000018812) #20 RBPJ (ENSPPRG00000024386) #22 CCKAR (ENSPPRG00000024018) #23 ENSPPRG00000023897 TBC1D19 (ENSPPRG00000023259) #24 STIM2 (ENSPPRG00000000768) #25 PCDH7 (ENSPPRG00000001154) #28 ENSPPRG00000021125 #30 lion MODERN SPECIES 4 ADGRA3 (ENSPLOG00000015872) GBA3 (ENSPLOG00000015752) PPARGC1A (ENSPLOG00000015341) ENSPLOG00000015280 DHX15 (ENSPLOG00000015238) SOD3 (ENSPLOG00000015212) #7 CCDC149 (ENSPLOG00000014724) #9 LGI2 (ENSPLOG00000014551) #10 SEPSECS (ENSPLOG00000014441) #11 PI4K2B (ENSPLOG00000014324) #12 ZCCHC4 (ENSPLOG00000014263) #14 ANAPC4 (ENSPLOG00000014198) #15 SLC34A2 (ENSPLOG00000013975) #18 SEL1L3 (ENSPLOG00000013599) #19 ENSPLOG00000013526 #20 RBPJ (ENSPLOG00000013224) #22 CCKAR (ENSPLOG00000013057) #23 ENSPLOG00000013017 ENSPLOG00000012957 TBC1D19 (ENSPLOG00000012764) #24 STIM2 (ENSPLOG00000012668) #25 PCDH7 (ENSPLOG00000012591) #28 ENSPLOG00000012507 #30 ENSPLOG00000012476 ENSPLOG00000012458 ENSPLOG00000012421 ENSPLOG00000012384 ARAP2 (ENSPLOG00000012184) #37 DTHD1 (ENSPLOG00000011795) ENSPLOG00000011702 CSN2 (ENSPLOG00000011567) Caniformia ANCESTRAL SPECIES 7 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 ENSGT00940000157949 Caniformia_b ANCESTRAL SPECIES 5 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000169973 ENSGT00940000157949 Mustelinae ANCESTRAL SPECIES 112 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 Ferret MODERN SPECIES 252 ADGRA3 (ENSMPUG00000016741) GBA3 (ENSMPUG00000016738) PPARGC1A (ENSMPUG00000016736) DHX15 (ENSMPUG00000016735) SOD3 (ENSMPUG00000020131) #7 CCDC149 (ENSMPUG00000016734) #9 LGI2 (ENSMPUG00000016733) #10 SEPSECS (ENSMPUG00000016732) #11 PI4K2B (ENSMPUG00000016729) #12 ZCCHC4 (ENSMPUG00000016727) #14 ANAPC4 (ENSMPUG00000016724) #15 SLC34A2 (ENSMPUG00000016722) #18 SEL1L3 (ENSMPUG00000016719) #19 ENSMPUG00000016717 ENSMPUG00000016716 RBPJ (ENSMPUG00000016715) #22 CCKAR (ENSMPUG00000016713) #23 TBC1D19 (ENSMPUG00000016711) #24 STIM2 (ENSMPUG00000016709) #25 American mink MODERN SPECIES 32 ADGRA3 (ENSNVIG00000012904) ENSNVIG00000012944 PPARGC1A (ENSNVIG00000012965) DHX15 (ENSNVIG00000013069) SOD3 (ENSNVIG00000013084) #7 CCDC149 (ENSNVIG00000013098) #9 LGI2 (ENSNVIG00000013203) #10 SEPSECS (ENSNVIG00000013227) #11 ENSNVIG00000013245 PI4K2B (ENSNVIG00000013261) #12 ZCCHC4 (ENSNVIG00000013287) #14 ANAPC4 (ENSNVIG00000013320) #15 SLC34A2 (ENSNVIG00000013390) #18 SEL1L3 (ENSNVIG00000013431) #19 SMIM20 (ENSNVIG00000013500) #20 RBPJ (ENSNVIG00000013517) #22 ENSNVIG00000013579 CCKAR (ENSNVIG00000013587) #23 TBC19 (ENSNVIG00000013610) #24 ENSNVIG00000013701 STIM2 (ENSNVIG00000013721) #25 Ursidae ANCESTRAL SPECIES 29 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00950000182895.a.a.a.a.a.a.b.a.a.c.b ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 Giant Panda MODERN SPECIES 2 KCNIP4 (ENSAMEG00000006445) ADGRA3 (ENSAMEG00000006461) GBA3 (ENSAMEG00000006494) PPARGC1A (ENSAMEG00000010421) DHX15 (ENSAMEG00000010482) SOD3 (ENSAMEG00000023550) #7 CCDC149 (ENSAMEG00000008440) #9 LGI2 (ENSAMEG00000008417) #10 SEPSECS (ENSAMEG00000014700) #11 PI4K2B (ENSAMEG00000014735) #12 ZCCHC4 (ENSAMEG00000027841) #14 ANAPC4 (ENSAMEG00000018114) #15 SLC34A2 (ENSAMEG00000018105) #18 SEL1L3 (ENSAMEG00000018094) #19 SMIM20 (ENSAMEG00000018092) #20 RBPJ (ENSAMEG00000018082) #22 CCKAR (ENSAMEG00000014732) #23 CAR1 (ENSAMEG00000031321) ENSAMEG00000023854 TBC1D19 (ENSAMEG00000014677) #24 STIM2 (ENSAMEG00000014649) #25 PCDH7 (ENSAMEG00000026428) #28 ENSAMEG00000029477 ARAP2 (ENSAMEG00000005492) #37 DTHD1 (ENSAMEG00000005528) NWD2 (ENSAMEG00000024908) C4orf19 (ENSAMEG00000011277) RELL1 (ENSAMEG00000011264) PGM2 (ENSAMEG00000011214) TBC1D1 (ENSAMEG00000011195) KLF3 (ENSAMEG00000010056) Ursus ANCESTRAL SPECIES 180 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 American black bear MODERN SPECIES 6118 RBPJ (ENSUAMG00000016450) #22 CCKAR (ENSUAMG00000016444) #23 Polar bear MODERN SPECIES 128 KCNIP4 (ENSUMAG00000003497) ADGRA3 (ENSUMAG00000003527) GBA3 (ENSUMAG00000003537) PPARGC1A (ENSUMAG00000003557) DHX15 (ENSUMAG00000003647) ENSUMAG00000003656 CCDC149 (ENSUMAG00000003673) #9 LGI2 (ENSUMAG00000003678) #10 SEPSECS (ENSUMAG00000003690) #11 PI4K2B (ENSUMAG00000003697) #12 ZCCHC4 (ENSUMAG00000003758) #14 ANAPC4 (ENSUMAG00000003767) #15 SLC34A2 (ENSUMAG00000003792) #18 SEL1L3 (ENSUMAG00000003892) #19 SMIM20 (ENSUMAG00000004164) #20 RBPJ (ENSUMAG00000004171) #22 CCKAR (ENSUMAG00000004192) #23 ENSUMAG00000004204 TBC1D19 (ENSUMAG00000004209) #24 ENSUMAG00000004223 STIM2 (ENSUMAG00000004243) #25 ENSUMAG00000004345 ENSUMAG00000004356 #28 ENSUMAG00000004367 #28 ENSUMAG00000004368 #30 DSEL (ENSUMAG00000004377) TMX3 (ENSUMAG00000004385) CCDC102B (ENSUMAG00000004396) DOK6 (ENSUMAG00000004418) CD226 (ENSUMAG00000004424) ENSUMAG00000004435 Canidae ANCESTRAL SPECIES 21 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Red fox MODERN SPECIES 1 ADGRA3 (ENSVVUG00000013329) GBA3 (ENSVVUG00000013354) ENSVVUG00000013361 PPARGC1A (ENSVVUG00000013365) ENSVVUG00000013388 DHX15 (ENSVVUG00000013395) CCDC149 (ENSVVUG00000013407) #9 LGI2 (ENSVVUG00000013458) #10 SEPSECS (ENSVVUG00000013476) #11 PI4K2B (ENSVVUG00000013490) #12 ZCCHC4 (ENSVVUG00000013506) #14 ANAPC4 (ENSVVUG00000013531) #15 SLC34A2 (ENSVVUG00000013552) #18 SEL1L3 (ENSVVUG00000013804) #19 SMIM20 (ENSVVUG00000013812) #20 RBPJ (ENSVVUG00000013837) #22 CCKAR (ENSVVUG00000013858) #23 TBC1D19 (ENSVVUG00000013875) #24 ENSVVUG00000013949 STIM2 (ENSVVUG00000013958) #25 ENSVVUG00000014058 PCDH7 (ENSVVUG00000014104) #28 ENSVVUG00000014123 #28 ENSVVUG00000014202 ENSVVUG00000014241 ENSVVUG00000014337 ARAP2 (ENSVVUG00000014348) #37 DTHD1 (ENSVVUG00000014412) NWD2 (ENSVVUG00000014429) ENSVVUG00000014438 RELL1 (ENSVVUG00000014443) Canis_lupus ANCESTRAL SPECIES 23 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556.i #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00970000193677 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Dingo MODERN SPECIES 138 GBA3 (ENSCAFG00020027241) PPARGC1A (ENSCAFG00020027242) ENSCAFG00020027244 DHX15 (ENSCAFG00020027245) SOD3 (ENSCAFG00020027246) #7 CCDC149 (ENSCAFG00020027247) #9 LGI2 (ENSCAFG00020027248) #10 SEPSECS (ENSCAFG00020027249) #11 PI4K2B (ENSCAFG00020027250) #12 ENSCAFG00020027252 #14 ENSCAFG00020027253 #14 ANAPC4 (ENSCAFG00020027256) #15 SLC34A2 (ENSCAFG00020027270) #18 SEL1L3 (ENSCAFG00020027291) #19 ENSCAFG00020027299 #20 RBPJ (ENSCAFG00020027303) #22 CCKAR (ENSCAFG00020027326) #23 TBC1D19 (ENSCAFG00020027330) #24 ENSCAFG00020027342 STIM2 (ENSCAFG00020027345) #25 ENSCAFG00020027346 ENSCAFG00020027359 PCDH7 (ENSCAFG00020027362) #28 ENSCAFG00020027369 ARAP2 (ENSCAFG00020027371) #37 DTHD1 (ENSCAFG00020027385) NWD2 (ENSCAFG00020027393) RELL1 (ENSCAFG00020027397) PGM2 (ENSCAFG00020027401) TBC1D1 (ENSCAFG00020027410) KLF3 (ENSCAFG00020027419) Dog MODERN SPECIES 22 ADGRA3 (ENSCAFG00845008840) GBA3 (ENSCAFG00845008730) PPARGC1A (ENSCAFG00845008311) DHX15 (ENSCAFG00845007821) SOD3 (ENSCAFG00845007800) #7 CCDC149 (ENSCAFG00845007671) #9 LGI2 (ENSCAFG00845007610) #10 SEPSECS (ENSCAFG00845007550) #11 PI4K2B (ENSCAFG00845007474) #12 ZCCHC4 (ENSCAFG00845007308) #14 ANAPC4 (ENSCAFG00845007014) #15 SLC34A2 (ENSCAFG00845006845) #18 SEL1L3 (ENSCAFG00845006276) #19 SMIM20 (ENSCAFG00845006127) #20 ENSCAFG00845006105 RBPJ (ENSCAFG00845005977) #22 CCKAR (ENSCAFG00845005880) #23 CAR1 (ENSCAFG00845005825) TBC1D19 (ENSCAFG00845005743) #24 STIM2 (ENSCAFG00845005670) #25 ENSCAFG00845005634 ENSCAFG00845005572 ENSCAFG00845005559 PCDH7 (ENSCAFG00845005515) #28 ENSCAFG00845005487 ARAP2 (ENSCAFG00845005336) #37 DTHD1 (ENSCAFG00845005244) ENSCAFG00845005226 NWD2 (ENSCAFG00845005206) ENSCAFG00845005184 RELL1 (ENSCAFG00845005126) Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Chiroptera ANCESTRAL SPECIES 9 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Megabat MODERN SPECIES 2083 RBPJ (ENSPVAG00000014199) #22 CCKAR (ENSPVAG00000014200) #23 TBC1D19 (ENSPVAG00000014201) #24 STIM2 (ENSPVAG00000014202) #25 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Microbat MODERN SPECIES 1049 GBA3 (ENSMLUG00000009213) ENSMLUG00000027157 ENSMLUG00000027956 PPARGC1A (ENSMLUG00000016307) DHX15 (ENSMLUG00000001617) SOD3 (ENSMLUG00000014742) #7 CCDC149 (ENSMLUG00000014745) #9 LGI2 (ENSMLUG00000005887) #10 SEPSECS (ENSMLUG00000005883) #11 PI4K2B (ENSMLUG00000001044) #12 ZCCHC4 (ENSMLUG00000004225) #14 ANAPC4 (ENSMLUG00000004233) #15 ENSMLUG00000000694 #18 SEL1L3 (ENSMLUG00000000702) #19 SMIM20 (ENSMLUG00000000713) #20 RBPJ (ENSMLUG00000017187) #22 CCKAR (ENSMLUG00000017191) #23 ENSMLUG00000023226 TBC1D19 (ENSMLUG00000017193) #24 STIM2 (ENSMLUG00000017200) #25 Greater horseshoe bat MODERN SPECIES 23 PPARGC1A (ENSRFEG00010001741) ENSRFEG00010001699 DHX15 (ENSRFEG00010001673) SOD3 (ENSRFEG00010001657) #7 CCDC149 (ENSRFEG00010001512) #9 LGI2 (ENSRFEG00010001447) #10 SEPSECS (ENSRFEG00010001416) #11 PI4K2B (ENSRFEG00010001371) #12 ZCCHC4 (ENSRFEG00010001312) #14 ANAPC4 (ENSRFEG00010001248) #15 SLC34A2 (ENSRFEG00010001179) #18 SEL1L3 (ENSRFEG00010001115) #19 SMIM20 (ENSRFEG00010001089) #20 ENSRFEG00010001077 ENSRFEG00010001068 RBPJ (ENSRFEG00010000987) #22 CCKAR (ENSRFEG00010000933) #23 TBC1D19 (ENSRFEG00010000865) #24 STIM2 (ENSRFEG00010000812) #25 ENSRFEG00010000792 PCDH7 (ENSRFEG00010000761) #28 ENSRFEG00010000734 ENSRFEG00010000675 #37 DTHD1 (ENSRFEG00010000588) NWD2 (ENSRFEG00010000529) C4orf19 (ENSRFEG00010000507) RELL1 (ENSRFEG00010000481) PGM2 (ENSRFEG00010000444) TBC1D1 (ENSRFEG00010000328) KLF3 (ENSRFEG00010000276) TLR10 (ENSRFEG00010000243) Equus ANCESTRAL SPECIES 12 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 Horse MODERN SPECIES 22 GBA3 (ENSECAG00000014346) PPARGC1A (ENSECAG00000009164) DHX15 (ENSECAG00000023224) ENSECAG00000045825 SOD3 (ENSECAG00000035543) #7 CCDC149 (ENSECAG00000022451) #9 LGI2 (ENSECAG00000016152) #10 SEPSECS (ENSECAG00000009932) #11 PI4K2B (ENSECAG00000008251) #12 ZCCHC4 (ENSECAG00000007352) #14 ANAPC4 (ENSECAG00000017692) #15 SLC34A2 (ENSECAG00000013315) #18 SEL1L3 (ENSECAG00000000638) #19 SMIM20 (ENSECAG00000041550) #20 ENSECAG00000002201 RBPJ (ENSECAG00000019257) #22 CCKAR (ENSECAG00000017266) #23 TBC1D19 (ENSECAG00000011680) #24 STIM2 (ENSECAG00000009481) #25 ENSECAG00000054073 ENSECAG00000027755 PCDH7 (ENSECAG00000000599) #28 ARAP2 (ENSECAG00000018069) #37 DTHD1 (ENSECAG00000017513) ENSECAG00000050605 NWD2 (ENSECAG00000017312) C3H4orf19 (ENSECAG00000017301) RELL1 (ENSECAG00000016126) PGM2 (ENSECAG00000009090) TBC1D1 (ENSECAG00000022162) KLF3 (ENSECAG00000021855) Donkey MODERN SPECIES 22 TMC1 (ENSEASG00005036859) ZFAND5 (ENSEASG00005009586) ENSEASG00005009587 ENSEASG00005007984 ENSEASG00005007991 SOD3 (ENSEASG00005033891) #7 CCDC149 (ENSEASG00005008000) #9 LGI2 (ENSEASG00005008001) #10 SEPSECS (ENSEASG00005008003) #11 PI4K2B (ENSEASG00005008006) #12 ZCCHC4 (ENSEASG00005008011) #14 ANAPC4 (ENSEASG00005008014) #15 SLC34A2 (ENSEASG00005008016) #18 SEL1L3 (ENSEASG00005008020) #19 SMIM20 (ENSEASG00005024155) #20 RBPJ (ENSEASG00005008027) #22 CCKAR (ENSEASG00005038229) #23 TBC1D19 (ENSEASG00005008046) #24 STIM2 (ENSEASG00005008051) #25 ENSEASG00005008057 PCDH7 (ENSEASG00005008070) #28 ARAP2 (ENSEASG00005008083) #37 DTHD1 (ENSEASG00005008101) NWD2 (ENSEASG00005008108) C4orf19 (ENSEASG00005025129) RELL1 (ENSEASG00005008112) ENSEASG00005035380 ENSEASG00005008115 TBC1D1 (ENSEASG00005008118) KLF3 (ENSEASG00005008124) TLR10 (ENSEASG00005008127) Artiodactyla ANCESTRAL SPECIES 12 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Suina ANCESTRAL SPECIES 33 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00940000155145.qb ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.b #25 ENSGT00390000000214.a.b.a #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Chacoan peccary MODERN SPECIES 960 GBA3 (ENSCWAG00000021575) PPARGC1A (ENSCWAG00000021590) ENSCWAG00000021624 DHX15 (ENSCWAG00000021627) SOD3 (ENSCWAG00000021634) #7 CCDC149 (ENSCWAG00000021648) #9 LGI2 (ENSCWAG00000011876) #10 SEPSECS (ENSCWAG00000011958) #11 PI4K2B (ENSCWAG00000011991) #12 ZCCHC4 (ENSCWAG00000012130) #14 ANAPC4 (ENSCWAG00000012255) #15 ENSCWAG00000012413 SLC34A2 (ENSCWAG00000012428) #18 SEL1L3 (ENSCWAG00000012543) #19 SMIM20 (ENSCWAG00000012836) #20 RBPJ (ENSCWAG00000012916) #22 CCKAR (ENSCWAG00000013281) #23 TBC1D19 (ENSCWAG00000013346) #24 STIM2 (ENSCWAG00000013559) #25 ENSCWAG00000013963 PCDH7 (ENSCWAG00000014012) #28 ARAP2 (ENSCWAG00000014103) #37 DTHD1 (ENSCWAG00000014349) ENSCWAG00000014755 NWD2 (ENSCWAG00000014812) C4orf19 (ENSCWAG00000014871) RELL1 (ENSCWAG00000014911) PGM2 (ENSCWAG00000014943) ENSCWAG00000014989 TBC1D1 (ENSCWAG00000015011) KLF3 (ENSCWAG00000015160) Pig MODERN SPECIES 16 GBA3 (ENSSSCG00000008754) PPARGC1A (ENSSSCG00000029275) ENSSSCG00000048996 DHX15 (ENSSSCG00000008756) SOD3 (ENSSSCG00000028814) #7 CCDC149 (ENSSSCG00000023001) #9 LGI2 (ENSSSCG00000028927) #10 SEPSECS (ENSSSCG00000025315) #11 PI4K2B (ENSSSCG00000027340) #12 ZCCHC4 (ENSSSCG00000028581) #14 ANAPC4 (ENSSSCG00000025902) #15 ENSSSCG00000028632 SLC34A2 (ENSSSCG00000008758) #18 SEL1L3 (ENSSSCG00000022446) #19 ENSSSCG00000040571 #20 RBPJ (ENSSSCG00000022155) #22 CCKAR (ENSSSCG00000061661) #23 TBC1D19 (ENSSSCG00000008761) #24 STIM2 (ENSSSCG00000008762) #25 ENSSSCG00000032413 #25 PCDH7 (ENSSSCG00000008765) #28 ENSSSCG00000008767 ARAP2 (ENSSSCG00000008768) #37 DTHD1 (ENSSSCG00000028471) ENSSSCG00000008769 NWD2 (ENSSSCG00000008770) C4orf19 (ENSSSCG00000008771) RELL1 (ENSSSCG00000008772) PGM2 (ENSSSCG00000008773) TBC1D1 (ENSSSCG00000028983) KLF3 (ENSSSCG00000036488) Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Camelidae ANCESTRAL SPECIES 22 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Alpaca MODERN SPECIES 1806 RBPJ (ENSVPAG00000003620) #22 CCKAR (ENSVPAG00000003622) #23 TBC1D19 (ENSVPAG00000003623) #24 STIM2 (ENSVPAG00000003626) #25 Arabian camel MODERN SPECIES 11 KCNIP4 (ENSCDRG00005017078) ADGRA3 (ENSCDRG00005016284) GBA3 (ENSCDRG00005016157) PPARGC1A (ENSCDRG00005015905) ENSCDRG00005015845 DHX15 (ENSCDRG00005015802) CCDC149 (ENSCDRG00005015468) #9 LGI2 (ENSCDRG00005015363) #10 SEPSECS (ENSCDRG00005015323) #11 PI4K2B (ENSCDRG00005015238) #12 ZCCHC4 (ENSCDRG00005015096) #14 ANAPC4 (ENSCDRG00005014928) #15 SLC34A2 (ENSCDRG00005014773) #18 SEL1L3 (ENSCDRG00005014618) #19 SMIM20 (ENSCDRG00005014579) #20 RBPJ (ENSCDRG00005013306) #22 CCKAR (ENSCDRG00005013202) #23 TBC1D19 (ENSCDRG00005012784) #24 STIM2 (ENSCDRG00005011898) #25 PCDH7 (ENSCDRG00005011781) #28 ENSCDRG00005011725 ARAP2 (ENSCDRG00005011185) #37 DTHD1 (ENSCDRG00005010874) NWD2 (ENSCDRG00005010804) C4orf19 (ENSCDRG00005010758) RELL1 (ENSCDRG00005010713) ENSCDRG00005010670 PGM2 (ENSCDRG00005010550) TBC1D1 (ENSCDRG00005010383) KLF3 (ENSCDRG00005010297) TLR10 (ENSCDRG00005010269) Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 Pecora ANCESTRAL SPECIES 15 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949.c.b ENSGT01030000235076 ENSGT00940000157949.c.a ENSGT00940000157456 Yarkand deer MODERN SPECIES 8 KCNIP4 (ENSCHYG00000020826) ADGRA3 (ENSCHYG00000021204) GBA3 (ENSCHYG00000021332) PPARGC1A (ENSCHYG00000021428) DHX15 (ENSCHYG00000021793) SOD3 (ENSCHYG00000006891) #7 CCDC149 (ENSCHYG00000006926) #9 LGI2 (ENSCHYG00000007044) #10 SEPSECS (ENSCHYG00000007094) #11 PI4K2B (ENSCHYG00000007192) #12 ZCCHC4 (ENSCHYG00000007309) #14 ANAPC4 (ENSCHYG00000007432) #15 SEL1L3 (ENSCHYG00000007618) #19 ENSCHYG00000008010 #20 ENSCHYG00000008030 RBPJ (ENSCHYG00000008084) #22 CCKAR (ENSCHYG00000008569) #23 TBC1D19 (ENSCHYG00000008635) #24 ENSCHYG00000009099 STIM2 (ENSCHYG00000009144) #25 ENSCHYG00000009335 ENSCHYG00000009369 PCDH7 (ENSCHYG00000009443) #28 ENSCHYG00000009498 #30 ARAP2 (ENSCHYG00000009613) #37 DTHD1 (ENSCHYG00000010657) NWD2 (ENSCHYG00000011104) C4orf19 (ENSCHYG00000011230) RELL1 (ENSCHYG00000011263) ENSCHYG00000011389 PGM2 (ENSCHYG00000011452) Percora_a ANCESTRAL SPECIES 18 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00940000154788 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949.c.b ENSGT01030000235076 ENSGT00940000157949.c.a Siberian musk deer MODERN SPECIES 1269 GBA3 (ENSMMSG00000014264) PPARGC1A (ENSMMSG00000014222) DHX15 (ENSMMSG00000014182) SOD3 (ENSMMSG00000014159) #7 CCDC149 (ENSMMSG00000014088) #9 LGI2 (ENSMMSG00000014063) #10 SEPSECS (ENSMMSG00000014034) #11 PI4K2B (ENSMMSG00000013983) #12 ENSMMSG00000013962 #14 ANAPC4 (ENSMMSG00000013938) #15 ENSMMSG00000013917 SLC34A2 (ENSMMSG00000013857) #18 SEL1L3 (ENSMMSG00000013767) #19 ENSMMSG00000013746 #20 ENSMMSG00000013732 RBPJ (ENSMMSG00000013568) #22 CCKAR (ENSMMSG00000013523) #23 ENSMMSG00000013500 TBC1D19 (ENSMMSG00000013351) #24 STIM2 (ENSMMSG00000013185) #25 ENSMMSG00000013164 ENSMMSG00000013140 ENSMMSG00000013133 PCDH7 (ENSMMSG00000013089) #28 ENSMMSG00000013078 #30 ENSMMSG00000013060 ENSMMSG00000013043 Bovidae ANCESTRAL SPECIES 18 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000154788.ob ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000153446.a.a.f ENSGT00940000156247 ENSGT00940000157949.c.b ENSGT01030000235076 ENSGT00940000157949.c.a Bovinae ANCESTRAL SPECIES 15 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f.b.b #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000154788.nb.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00960000190968 ENSGT01100000263474.a.b.b.e.a.a.a.a.u.b.a ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000153446.a.a.f ENSGT00940000156247 ENSGT01030000235076 Bos ANCESTRAL SPECIES 15 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f.b.b #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.b.a.b ENSGT00940000154788.nb.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00960000190968 ENSGT01100000263474.a.b.b.e.a.a.a.a.u.b.a ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000153446.a.a.f ENSGT00940000156247 Bos_a ANCESTRAL SPECIES 21 ENSGT00940000155133.b.n ENSGT00550000075088.a.a.ob.b ENSGT00390000006247.e.a ENSGT00940000154222.d.b.d.g.a.a ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000155680.d ENSGT00940000158223 ENSGT00940000160897 ENSGT01030000234574.B.c.a.a ENSGT00530000063424.b ENSGT00390000003791.a.a.a ENSGT00940000157350 ENSGT00390000004874.a.b ENSGT00390000002398.f.b.b #20 ENSGT00390000005197.a #22 ENSGT00940000153771.B ENSGT00940000165276 ENSGT00940000157329 ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914.l ENSGT00940000154426.b.b.g.a ENSGT00940000158010 ENSGT00950000185288 ENSGT00940000155816.b ENSGT00940000159393.e Domestic yak DUPLICATION Domestic yak MODERN SPECIES 25 ENSBGRG00000016888 MAPK10 (ENSBGRG00000017007) ARHGAP24 (ENSBGRG00000018148) ENSBGRG00000018396 WDFY3 (ENSBGRG00000018444) ENSBGRG00000020638 CDS1 (ENSBGRG00000020658) NKX6-1 (ENSBGRG00000020754) ENSBGRG00000020797 ABRAXAS1 (ENSBGRG00000020830) MRPS18C (ENSBGRG00000020952) ENSBGRG00000021080 ENSBGRG00000021100 HPSE (ENSBGRG00000021245) COQ2 (ENSBGRG00000021631) ENSBGRG00000021702 #22 ENSBGRG00000021746 PLAC8 (ENSBGRG00000021788) COPS4 (ENSBGRG00000021845) LIN54 (ENSBGRG00000021975) THAP9 (ENSBGRG00000022302) SEC31A (ENSBGRG00000022409) SCD5 (ENSBGRG00000023293) TMEM150C (ENSBGRG00000023370) ENOPH1 (ENSBGRG00000023470) ENSBGRG00000023638 RASGEF1B (ENSBGRG00000023927) PRKG2 (ENSBGRG00000024304) BMP3 (ENSBGRG00000024470) CFAP299 (ENSBGRG00000024488) FGF5 (ENSBGRG00000010381) Domestic yak MODERN SPECIES 25 GBA3 (ENSBGRG00000014640) ENSBGRG00000014626 PPARGC1A (ENSBGRG00000014262) DHX15 (ENSBGRG00000014165) SOD3 (ENSBGRG00000014092) #7 CCDC149 (ENSBGRG00000013831) #9 LGI2 (ENSBGRG00000013655) #10 ENSBGRG00000013588 #11 ENSBGRG00000013553 #11 PI4K2B (ENSBGRG00000013424) #12 ZCCHC4 (ENSBGRG00000013290) #14 ANAPC4 (ENSBGRG00000012791) #15 SLC34A2 (ENSBGRG00000012616) #18 SEL1L3 (ENSBGRG00000012074) #19 ENSBGRG00000011943 #20 ENSBGRG00000011453 #22 CCKAR (ENSBGRG00000011346) #23 TBC1D19 (ENSBGRG00000010907) #24 STIM2 (ENSBGRG00000010679) #25 PCDH7 (ENSBGRG00000010538) #28 ENSBGRG00000010506 ENSBGRG00000010405 ENSBGRG00000010382 ENSBGRG00000005033 ARAP2 (ENSBGRG00000004941) #37 ENSBGRG00000004904 DTHD1 (ENSBGRG00000004754) ENSBGRG00000004728 NWD2 (ENSBGRG00000004653) C4orf19 (ENSBGRG00000004620) RELL1 (ENSBGRG00000004570) Wild yak DUPLICATION Wild yak MODERN SPECIES 1808 HPSE (ENSBMUG00000009695) ENSBMUG00000009646 #22 COQ2 (ENSBMUG00000009639) Wild yak MODERN SPECIES 883 ADGRA3 (ENSBMUG00000008551) GBA3 (ENSBMUG00000008806) PPARGC1A (ENSBMUG00000008896) DHX15 (ENSBMUG00000008926) SOD3 (ENSBMUG00000008945) #7 CCDC149 (ENSBMUG00000009015) #9 LGI2 (ENSBMUG00000009065) #10 ENSBMUG00000009078 #11 ENSBMUG00000009090 #11 PI4K2B (ENSBMUG00000009097) #12 ZCCHC4 (ENSBMUG00000009112) #14 ANAPC4 (ENSBMUG00000009147) #15 SLC34A2 (ENSBMUG00000009192) #18 SEL1L3 (ENSBMUG00000009222) #19 ENSBMUG00000009243 #20 ENSBMUG00000009400 #22 CCKAR (ENSBMUG00000009499) #23 Bos_b ANCESTRAL SPECIES 14 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.f.b.b #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000165919 ENSGT00940000157221 #28 ENSGT01100000263481.n.a.b.a.a.a.b.b.a.a.b.b.a.b.b.a.b.a.b ENSGT00940000154788.nb.a ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00960000190968 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000153446.a.a.f ENSGT00940000156247 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 25 ENSBIXG00005017276 ENSBIXG00005017372 ENSBIXG00005002829 ENSBIXG00005005513 MAPK10 (ENSBIXG00005018360) ARHGAP24 (ENSBIXG00005018506) WDFY3 (ENSBIXG00005018815) CDS1 (ENSBIXG00005000063) NKX6-1 (ENSBIXG00005003082) ENSBIXG00005018974 ABRAXAS1 (ENSBIXG00005019067) ENSBIXG00005019139 HELQ (ENSBIXG00005019158) ENSBIXG00005019178 HPSE (ENSBIXG00005019430) ENSBIXG00005003170 #22 COQ2 (ENSBIXG00005019522) ENSBIXG00005019535 ENSBIXG00005019584 COPS4 (ENSBIXG00005019645) LIN54 (ENSBIXG00005003283) THAP9 (ENSBIXG00005006456) SEC31A (ENSBIXG00005020914) ENSBIXG00005021130 ENSBIXG00005003572 SCD5 (ENSBIXG00005003574) ENSBIXG00005021178 TMEM150C (ENSBIXG00005003590) ENOPH1 (ENSBIXG00005021273) HNRNPDL (ENSBIXG00005021441) ENSBIXG00005003631 Hybrid Bos Indicus MODERN SPECIES 25 KCNIP4 (ENSBIXG00005016282) ADGRA3 (ENSBIXG00005016078) GBA3 (ENSBIXG00005002538) PPARGC1A (ENSBIXG00005002513) DHX15 (ENSBIXG00005000158) SOD3 (ENSBIXG00005015766) #7 CCDC149 (ENSBIXG00005015720) #9 LGI2 (ENSBIXG00005015662) #10 SEPSECS (ENSBIXG00005015627) #11 PI4K2B (ENSBIXG00005007139) #12 ZCCHC4 (ENSBIXG00005015528) #14 ANAPC4 (ENSBIXG00005015494) #15 SLC34A2 (ENSBIXG00005015405) #18 SEL1L3 (ENSBIXG00005015302) #19 ENSBIXG00005015232 #20 ENSBIXG00005015160 #22 ENSBIXG00005014915 CCKAR (ENSBIXG00005014904) #23 TBC1D19 (ENSBIXG00005014867) #24 STIM2 (ENSBIXG00005014774) #25 ENSBIXG00005014691 ENSBIXG00005014672 PCDH7 (ENSBIXG00005014583) #28 ENSBIXG00005014562 ENSBIXG00005014544 ARAP2 (ENSBIXG00005014502) #37 DTHD1 (ENSBIXG00005014282) ENSBIXG00005014188 NWD2 (ENSBIXG00005001843) C4orf19 (ENSBIXG00005014137) RELL1 (ENSBIXG00005014109) Cow DUPLICATION Cow MODERN SPECIES 25 ENSBTAG00000050963 ENSBTAG00000047514 PTPN13 (ENSBTAG00000014947) ENSBTAG00000050276 ENSBTAG00000045839 MAPK10 (ENSBTAG00000020048) ARHGAP24 (ENSBTAG00000003959) WDFY3 (ENSBTAG00000013495) CDS1 (ENSBTAG00000045787) NKX6-1 (ENSBTAG00000002518) GPAT3 (ENSBTAG00000017592) ABRAXAS1 (ENSBTAG00000014076) MRPS18C (ENSBTAG00000018155) HELQ (ENSBTAG00000018151) HPSE (ENSBTAG00000005745) ENSBTAG00000046700 #22 COQ2 (ENSBTAG00000005744) PLAC8A (ENSBTAG00000009849) PLAC8B (ENSBTAG00000031750) COPS4 (ENSBTAG00000006950) LIN54 (ENSBTAG00000010546) THAP9 (ENSBTAG00000022450) SEC31A (ENSBTAG00000020525) SCD5 (ENSBTAG00000022449) TMEM150C (ENSBTAG00000032588) ENOPH1 (ENSBTAG00000014805) HNRNPDL (ENSBTAG00000014804) HNRNPD (ENSBTAG00000013952) ENSBTAG00000052070 RASGEF1B (ENSBTAG00000006561) PRKG2 (ENSBTAG00000002978) Cow MODERN SPECIES 25 ENSBTAG00000054175 ENSBTAG00000033327 PPARGC1A (ENSBTAG00000017024) ENSBTAG00000050251 DHX15 (ENSBTAG00000008896) SOD3 (ENSBTAG00000013980) #7 CCDC149 (ENSBTAG00000021940) #9 LGI2 (ENSBTAG00000017390) #10 SEPSECS (ENSBTAG00000014616) #11 PI4K2B (ENSBTAG00000006492) #12 ZCCHC4 (ENSBTAG00000007240) #14 ANAPC4 (ENSBTAG00000000646) #15 SLC34A2 (ENSBTAG00000001545) #18 SEL1L3 (ENSBTAG00000002299) #19 SMIM20 (ENSBTAG00000003897) #20 RBPJ (ENSBTAG00000003602) #22 CCKAR (ENSBTAG00000004988) #23 TBC1D19 (ENSBTAG00000033214) #24 STIM2 (ENSBTAG00000019353) #25 ENSBTAG00000018885 PCDH7 (ENSBTAG00000000061) #28 ENSBTAG00000048536 ARAP2 (ENSBTAG00000039922) #37 DTHD1 (ENSBTAG00000009833) ENSBTAG00000050655 NWD2 (ENSBTAG00000001491) C6H4orf19 (ENSBTAG00000006643) RELL1 (ENSBTAG00000004329) ENSBTAG00000053088 PGM2 (ENSBTAG00000005773) ENSBTAG00000052370 American bison DUPLICATION American bison MODERN SPECIES 3145 ENSBBBG00000019073 MAPK10 (ENSBBBG00000021242) ENSBBBG00000021405 ARHGAP24 (ENSBBBG00000021449) WDFY3 (ENSBBBG00000021530) CDS1 (ENSBBBG00000021561) NKX6-1 (ENSBBBG00000021568) GPAT3 (ENSBBBG00000021607) ABRAXAS1 (ENSBBBG00000021618) ENSBBBG00000007196 HELQ (ENSBBBG00000005762) HPSE (ENSBBBG00000021800) ENSBBBG00000021819 #22 COQ2 (ENSBBBG00000021841) ENSBBBG00000005784 PLAC8 (ENSBBBG00000021864) COPS4 (ENSBBBG00000021925) LIN54 (ENSBBBG00000022049) THAP9 (ENSBBBG00000005822) SEC31A (ENSBBBG00000022615) SCD5 (ENSBBBG00000008790) TMEM150C (ENSBBBG00000022705) ENSBBBG00000022729 HNRNPDL (ENSBBBG00000005995) HNRNPD (ENSBBBG00000022878) ENSBBBG00000022894 RASGEF1B (ENSBBBG00000023005) PRKG2 (ENSBBBG00000023088) American bison MODERN SPECIES 3060 ADGRA3 (ENSBBBG00000015349) GBA3 (ENSBBBG00000015331) PPARGC1A (ENSBBBG00000003508) DHX15 (ENSBBBG00000001321) SOD3 (ENSBBBG00000001360) #7 CCDC149 (ENSBBBG00000001370) #9 LGI2 (ENSBBBG00000015299) #10 SEPSECS (ENSBBBG00000015291) #11 PI4K2B (ENSBBBG00000015277) #12 ZCCHC4 (ENSBBBG00000003522) #14 ANAPC4 (ENSBBBG00000003767) #15 SLC34A2 (ENSBBBG00000015150) #18 SEL1L3 (ENSBBBG00000015090) #19 ENSBBBG00000015008 #20 ENSBBBG00000014989 #22 CCKAR (ENSBBBG00000000817) #23 TBC1D19 (ENSBBBG00000000826) #24 STIM2 (ENSBBBG00000000908) #25 PCDH7 (ENSBBBG00000001030) #28 ENSBBBG00000001043 ENSBBBG00000001055 Caprinae ANCESTRAL SPECIES 13 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.e.b #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000165919 ENSGT00390000003718.d.tb.a.a ENSGT00940000157221 #28 ENSGT00940000154788.ob ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949.c.b ENSGT00940000157949.c.a Goat MODERN SPECIES 25 ADGRA3 (ENSCHIG00000019880) GBA3 (ENSCHIG00000011472) PPARGC1A (ENSCHIG00000015991) DHX15 (ENSCHIG00000026321) SOD3 (ENSCHIG00000017899) #7 CCDC149 (ENSCHIG00000015517) #9 LGI2 (ENSCHIG00000022089) #10 SEPSECS (ENSCHIG00000010810) #11 PI4K2B (ENSCHIG00000022484) #12 ZCCHC4 (ENSCHIG00000022645) #14 ANAPC4 (ENSCHIG00000023609) #15 SLC34A2 (ENSCHIG00000015739) #18 SEL1L3 (ENSCHIG00000020813) #19 ENSCHIG00000016018 ENSCHIG00000026046 #20 RBPJ (ENSCHIG00000022041) #22 CCKAR (ENSCHIG00000024465) #23 TBC1D19 (ENSCHIG00000015018) #24 STIM2 (ENSCHIG00000004257) #25 ENSCHIG00000013741 ENSCHIG00000010665 PCDH7 (ENSCHIG00000003875) #28 ENSCHIG00000023385 ENSCHIG00000009154 ARAP2 (ENSCHIG00000014093) #37 ENSCHIG00000022196 DTHD1 (ENSCHIG00000018566) NWD2 (ENSCHIG00000004289) C4orf19 (ENSCHIG00000015946) RELL1 (ENSCHIG00000005379) ENSCHIG00000022059 Rambouillet Sheep MODERN SPECIES 22 GBA3 (ENSOARG00020014356) PPARGC1A (ENSOARG00020014504) DHX15 (ENSOARG00020015199) SOD3 (ENSOARG00020015395) #7 CCDC149 (ENSOARG00020015431) #9 LGI2 (ENSOARG00020015826) #10 SEPSECS (ENSOARG00020015918) #11 PI4K2B (ENSOARG00020015990) #12 ZCCHC4 (ENSOARG00020016087) #14 ANAPC4 (ENSOARG00020016174) #15 ENSOARG00020017059 SLC34A2 (ENSOARG00020017154) #18 SEL1L3 (ENSOARG00020017417) #19 ENSOARG00020019074 ENSOARG00020019119 #20 RBPJ (ENSOARG00020019203) #22 CCKAR (ENSOARG00020019878) #23 TBC1D19 (ENSOARG00020019954) #24 STIM2 (ENSOARG00020020357) #25 ENSOARG00020020464 ENSOARG00020020499 PCDH7 (ENSOARG00020020567) #28 ENSOARG00020020648 ARAP2 (ENSOARG00020020778) #37 DTHD1 (ENSOARG00020021575) NWD2 (ENSOARG00020021937) C6H4orf19 (ENSOARG00020021966) RELL1 (ENSOARG00020021988) PGM2 (ENSOARG00020022008) TBC1D1 (ENSOARG00020022096) KLF3 (ENSOARG00020022589) Cetacea ANCESTRAL SPECIES 12 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00960000191194 ENSGT00940000157949 ENSGT00940000157456 Odontoceti DUPLICATION Odontoceti DUPLICATION Odontoceti ANCESTRAL SPECIES ENSGT00390000005197.a.y.a #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000005197.a.y.a #22 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00940000158402 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00390000005197.a.y.a #22 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00970000193421.C.b.d.a.a.a ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000160787.b ENSGT00940000160197 #37 ENSGT00940000155541.C.eb.b ENSGT00940000153404.b Vaquita MODERN SPECIES 16 SLIT2 (ENSPSNG00000017795) PACRGL (ENSPSNG00000019499) KCNIP4 (ENSPSNG00000019756) ADGRA3 (ENSPSNG00000020337) PPARGC1A (ENSPSNG00000020569) ENSPSNG00000020646 ENSPSNG00000020677 DHX15 (ENSPSNG00000020699) SOD3 (ENSPSNG00000020739) #7 CCDC149 (ENSPSNG00000020784) #9 LGI2 (ENSPSNG00000020909) #10 SEPSECS (ENSPSNG00000020956) #11 PI4K2B (ENSPSNG00000021008) #12 ZCCHC4 (ENSPSNG00000021077) #14 ANAPC4 (ENSPSNG00000021117) #15 ENSPSNG00000021159 #22 SLC34A2 (ENSPSNG00000021188) #18 SEL1L3 (ENSPSNG00000021270) #19 SMIM20 (ENSPSNG00000021406) #20 ENSPSNG00000021513 #22 CCKAR (ENSPSNG00000021657) #23 TBC1D19 (ENSPSNG00000021702) #24 ENSPSNG00000021771 STIM2 (ENSPSNG00000021816) #25 ENSPSNG00000021862 ENSPSNG00000000096 PCDH7 (ENSPSNG00000000169) #28 ENSPSNG00000000209 ENSPSNG00000000226 ENSPSNG00000000255 ENSPSNG00000000272 Monodontidae ANCESTRAL SPECIES 9 ENSGT00940000158402 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00390000005197.a.y.a #22 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000155534.f.b ENSGT00940000160787.b ENSGT00940000160197 #37 ENSGT00940000155541.C.eb.b ENSGT00940000153404.b Narwhal MODERN SPECIES 307 ENSMMNG00015009273 SLIT2 (ENSMMNG00015009152) PACRGL (ENSMMNG00015009050) KCNIP4 (ENSMMNG00015008956) ADGRA3 (ENSMMNG00015008884) ENSMMNG00015008863 PPARGC1A (ENSMMNG00015008833) ENSMMNG00015008809 DHX15 (ENSMMNG00015008799) CCDC149 (ENSMMNG00015008754) #9 LGI2 (ENSMMNG00015008731) #10 SEPSECS (ENSMMNG00015008713) #11 PI4K2B (ENSMMNG00015008695) #12 ZCCHC4 (ENSMMNG00015008659) #14 ANAPC4 (ENSMMNG00015008631) #15 ENSMMNG00015008616 #22 SLC34A2 (ENSMMNG00015008603) #18 SEL1L3 (ENSMMNG00015008572) #19 ENSMMNG00015008545 #20 ENSMMNG00015008477 #22 CCKAR (ENSMMNG00015008421) #23 TBC1D19 (ENSMMNG00015008369) #24 ENSMMNG00015008341 STIM2 (ENSMMNG00015008324) #25 ENSMMNG00015008293 PCDH7 (ENSMMNG00015008274) #28 ENSMMNG00015008263 #30 ENSMMNG00015008253 ENSMMNG00015008245 ENSMMNG00015008234 ARAP2 (ENSMMNG00015008196) #37 Odontoceti ANCESTRAL SPECIES 6 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000005197.a.y.b #22 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000015914 ENSGT00390000007913 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT00390000005197.a.y.b #22 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000015914 ENSGT00390000007913 Odontoceti_b ANCESTRAL SPECIES 5 ENSGT00730000111407 ENSGT00390000006595 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000005197.a.y.b #22 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 ENSGT00940000162848 ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000015914 ENSGT00390000007913 ENSGT00530000063461.B Vaquita MODERN SPECIES 10 ZNF428 (ENSPSNG00000012675) CADM4 (ENSPSNG00000012638) PLAUR (ENSPSNG00000012605) IRGC (ENSPSNG00000012553) SMG9 (ENSPSNG00000012488) KCNN4 (ENSPSNG00000012439) ENSPSNG00000012199 ENSPSNG00000012110 ZNF404 (ENSPSNG00000012045) ZNF45 (ENSPSNG00000011992) ZNF234 (ENSPSNG00000011970) ZNF226 (ENSPSNG00000011933) ENSPSNG00000011903 ZNF227 (ENSPSNG00000011880) ENSPSNG00000011845 ENSPSNG00000011802 #22 ZNF235 (ENSPSNG00000011738) ZNF112 (ENSPSNG00000011685) ENSPSNG00000011637 ZNF180 (ENSPSNG00000011592) PVR (ENSPSNG00000011424) CEACAM16 (ENSPSNG00000011329) BCL3 (ENSPSNG00000011274) CBLC (ENSPSNG00000011032) BCAM (ENSPSNG00000010946) NECTIN2 (ENSPSNG00000010879) TOMM40 (ENSPSNG00000010804) APOE (ENSPSNG00000010763) ENSPSNG00000010685 APOC2 (ENSPSNG00000010569) CLPTM1 (ENSPSNG00000010345) Sperm whale MODERN SPECIES 8 ZNF428 (ENSPCTG00005004804) ZNF576 (ENSPCTG00005004787) IRGQ (ENSPCTG00005004773) ENSPCTG00005004754 XRCC1 (ENSPCTG00005004727) SMG9 (ENSPCTG00005004696) KCNN4 (ENSPCTG00005004665) LYPD5 (ENSPCTG00005004646) ENSPCTG00005004632 ZNF283 (ENSPCTG00005004607) ZNF404 (ENSPCTG00005004577) ENSPCTG00005004558 ZNF234 (ENSPCTG00005004394) ZNF227 (ENSPCTG00005004283) ZNF233 (ENSPCTG00005019492) ENSPCTG00005019460 #22 ZNF235 (ENSPCTG00005019382) ZNF112 (ENSPCTG00005019339) ZNF180 (ENSPCTG00005019212) PPP1R37 (ENSPCTG00005019110) NKPD1 (ENSPCTG00005019081) ENSPCTG00005018967 BLOC1S3 (ENSPCTG00005018936) EXOC3L2 (ENSPCTG00005018759) APOE (ENSPCTG00005018722) RELB (ENSPCTG00005018535) CLASRP (ENSPCTG00005018407) ENSPCTG00005018377 GGN (ENSPCTG00005018321) PSMD8 (ENSPCTG00005018243) ENSPCTG00005016796 Odontoceti ANCESTRAL SPECIES 11 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00970000193421.C.b.d.a.a.a ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000160197 #37 ENSGT00940000155541.C.eb.b ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00960000191194 Sperm whale MODERN SPECIES 18 KCNIP4 (ENSPCTG00005012048) ADGRA3 (ENSPCTG00005011845) ENSPCTG00005011760 PPARGC1A (ENSPCTG00005011631) DHX15 (ENSPCTG00005011521) SOD3 (ENSPCTG00005011496) #7 CCDC149 (ENSPCTG00005011289) #9 LGI2 (ENSPCTG00005011194) #10 SEPSECS (ENSPCTG00005011169) #11 PI4K2B (ENSPCTG00005011034) #12 ZCCHC4 (ENSPCTG00005010952) #14 ANAPC4 (ENSPCTG00005010830) #15 ENSPCTG00005010721 #18 SEL1L3 (ENSPCTG00005010228) #19 ENSPCTG00005010143 #18 ENSPCTG00005009702 #22 CCKAR (ENSPCTG00005009612) #23 TBC1D19 (ENSPCTG00005009308) #24 ENSPCTG00005009237 STIM2 (ENSPCTG00005008859) #25 ENSPCTG00005008821 ENSPCTG00005008787 PCDH7 (ENSPCTG00005008773) #28 ENSPCTG00005008758 #30 ENSPCTG00005008723 ENSPCTG00005008684 #37 ENSPCTG00005018478 DTHD1 (ENSPCTG00005018074) ENSPCTG00005018056 ENSPCTG00005018031 ENSPCTG00005018016 Odontoceti_a ANCESTRAL SPECIES 7 ENSGT00940000161223 ENSGT00940000153599.A ENSGT00950000183007.a.a.b ENSGT00390000003568 ENSGT00950000182904.a.a.b ENSGT00940000153599.B.b ENSGT00390000010734.j.b.h.a ENSGT00940000161267.b ENSGT00940000164159 ENSGT00940000162545 ENSGT00940000163462 ENSGT00940000162119 ENSGT00940000162819 ENSGT00940000163265 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT00390000005197.a.y.b #22 ENSGT00940000162402 ENSGT00940000162215 ENSGT00940000163580 ENSGT00940000162315 ENSGT00390000015308 ENSGT00940000162848 ENSGT01100000263479.C ENSGT00940000161392 ENSGT00940000162336 ENSGT00940000161038 ENSGT00940000161167 ENSGT00390000003308.a ENSGT00950000182929.B.b ENSGT00390000015914 Dolphin MODERN SPECIES 1708 RBPJ (ENSTTRG00000009022) #22 CCKAR (ENSTTRG00000009078) #23 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00390000005197.a.y.a #22 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00970000193421.C.b.d.a.a.a ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000160787.b ENSGT00940000160197 #37 ENSGT00940000155541.C.eb.b ENSGT00940000153404.b ENSGT00390000018316.b.b.g.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 Vaquita MODERN SPECIES 16 PPARGC1A (ENSPSNG00000020569) ENSPSNG00000020646 ENSPSNG00000020677 DHX15 (ENSPSNG00000020699) SOD3 (ENSPSNG00000020739) #7 CCDC149 (ENSPSNG00000020784) #9 LGI2 (ENSPSNG00000020909) #10 SEPSECS (ENSPSNG00000020956) #11 PI4K2B (ENSPSNG00000021008) #12 ZCCHC4 (ENSPSNG00000021077) #14 ANAPC4 (ENSPSNG00000021117) #15 ENSPSNG00000021159 #22 SLC34A2 (ENSPSNG00000021188) #18 SEL1L3 (ENSPSNG00000021270) #19 SMIM20 (ENSPSNG00000021406) #20 ENSPSNG00000021513 #22 CCKAR (ENSPSNG00000021657) #23 TBC1D19 (ENSPSNG00000021702) #24 ENSPSNG00000021771 STIM2 (ENSPSNG00000021816) #25 ENSPSNG00000021862 ENSPSNG00000000096 PCDH7 (ENSPSNG00000000169) #28 ENSPSNG00000000209 ENSPSNG00000000226 ENSPSNG00000000255 ENSPSNG00000000272 ENSPSNG00000000293 ENSPSNG00000000307 ARAP2 (ENSPSNG00000000450) #37 ENSPSNG00000000612 Monodontidae ANCESTRAL SPECIES 9 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00900000143693 ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00390000005197.a.y.a #22 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398.d #20 ENSGT00390000005197.a.z #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00860000135660 #30 ENSGT00990000211064 ENSGT00940000155534.f.b ENSGT00940000160787.b ENSGT00940000160197 #37 ENSGT00940000155541.C.eb.b ENSGT00940000153404.b ENSGT00390000018316.b.b.g.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 Beluga whale MODERN SPECIES 77 KCNIP4 (ENSDLEG00000014391) ADGRA3 (ENSDLEG00000014341) PPARGC1A (ENSDLEG00000014290) ENSDLEG00000014273 DHX15 (ENSDLEG00000014245) SOD3 (ENSDLEG00000014224) #7 CCDC149 (ENSDLEG00000014195) #9 LGI2 (ENSDLEG00000014089) #10 SEPSECS (ENSDLEG00000014056) #11 PI4K2B (ENSDLEG00000014029) #12 ZCCHC4 (ENSDLEG00000013994) #14 ANAPC4 (ENSDLEG00000013885) #15 SLC34A2 (ENSDLEG00000013774) #18 SEL1L3 (ENSDLEG00000013692) #19 SMIM20 (ENSDLEG00000013675) #20 RBPJ (ENSDLEG00000013407) #22 CCKAR (ENSDLEG00000013378) #23 TBC1D19 (ENSDLEG00000013283) #24 ENSDLEG00000013230 STIM2 (ENSDLEG00000013214) #25 ENSDLEG00000013183 PCDH7 (ENSDLEG00000013164) #28 ENSDLEG00000013137 #30 ENSDLEG00000015493 ENSDLEG00000015489 ENSDLEG00000015483 ARAP2 (ENSDLEG00000015400) #37 ENSDLEG00000015377 DTHD1 (ENSDLEG00000015353) ENSDLEG00000015342 ENSDLEG00000015338 Narwhal DUPLICATION Narwhal MODERN SPECIES 296 IRGQ (ENSMMNG00015005465) ZNF576 (ENSMMNG00015005472) ZNF428 (ENSMMNG00015005482) CADM4 (ENSMMNG00015005492) PLAUR (ENSMMNG00015005513) IRGC (ENSMMNG00015005542) SMG9 (ENSMMNG00015005571) KCNN4 (ENSMMNG00015005629) ENSMMNG00015005688 ENSMMNG00015005709 ZNF404 (ENSMMNG00015005731) ZNF226 (ENSMMNG00015005773) ZNF234 (ENSMMNG00015005804) ZNF227 (ENSMMNG00015005818) ZNF233 (ENSMMNG00015005842) ENSMMNG00015005869 #22 ZNF235 (ENSMMNG00015005891) ZNF112 (ENSMMNG00015005915) ZNF180 (ENSMMNG00015005951) PVR (ENSMMNG00015005992) CEACAM16 (ENSMMNG00015006016) BCL3 (ENSMMNG00015006047) CBLC (ENSMMNG00015006080) BCAM (ENSMMNG00015006104) NECTIN2 (ENSMMNG00015006141) TOMM40 (ENSMMNG00015006165) APOE (ENSMMNG00015006181) ENSMMNG00015006191 APOC2 (ENSMMNG00015006207) CLPTM1 (ENSMMNG00015006240) RELB (ENSMMNG00015006315) Narwhal MODERN SPECIES 307 ADGRA3 (ENSMMNG00015008884) ENSMMNG00015008863 PPARGC1A (ENSMMNG00015008833) ENSMMNG00015008809 DHX15 (ENSMMNG00015008799) CCDC149 (ENSMMNG00015008754) #9 LGI2 (ENSMMNG00015008731) #10 SEPSECS (ENSMMNG00015008713) #11 PI4K2B (ENSMMNG00015008695) #12 ZCCHC4 (ENSMMNG00015008659) #14 ANAPC4 (ENSMMNG00015008631) #15 ENSMMNG00015008616 #22 SLC34A2 (ENSMMNG00015008603) #18 SEL1L3 (ENSMMNG00015008572) #19 ENSMMNG00015008545 #20 ENSMMNG00015008477 #22 CCKAR (ENSMMNG00015008421) #23 TBC1D19 (ENSMMNG00015008369) #24 ENSMMNG00015008341 STIM2 (ENSMMNG00015008324) #25 ENSMMNG00015008293 PCDH7 (ENSMMNG00015008274) #28 ENSMMNG00015008263 #30 ENSMMNG00015008253 ENSMMNG00015008245 ENSMMNG00015008234 ARAP2 (ENSMMNG00015008196) #37 ENSMMNG00015008174 DTHD1 (ENSMMNG00015008156) ENSMMNG00015008131 ENSMMNG00015008120 Blue whale DUPLICATION Blue whale MODERN SPECIES 10 ZNF576 (ENSBMSG00010018851) ZNF428 (ENSBMSG00010018837) CADM4 (ENSBMSG00010018803) PLAUR (ENSBMSG00010018727) SMG9 (ENSBMSG00010018658) KCNN4 (ENSBMSG00010018610) LYPD5 (ENSBMSG00010018589) ENSBMSG00010018533 ENSBMSG00010018502 ENSBMSG00010018418 ZNF404 (ENSBMSG00010018387) ZNF45 (ENSBMSG00010018363) ENSBMSG00010018339 ZNF227 (ENSBMSG00010018318) ZNF233 (ENSBMSG00010018274) ENSBMSG00010018200 #22 ZNF235 (ENSBMSG00010018150) ZNF112 (ENSBMSG00010018101) ENSBMSG00010018020 ZNF180 (ENSBMSG00010017984) PVR (ENSBMSG00010017815) ENSBMSG00010017740 CEACAM16 (ENSBMSG00010017706) BCL3 (ENSBMSG00010017643) CBLC (ENSBMSG00010017585) BCAM (ENSBMSG00010017513) NECTIN2 (ENSBMSG00010017417) TOMM40 (ENSBMSG00010017365) APOE (ENSBMSG00010017333) ENSBMSG00010017290 APOC2 (ENSBMSG00010017237) Blue whale MODERN SPECIES 16 ENSBMSG00010002859 KCNIP4 (ENSBMSG00010002394) ADGRA3 (ENSBMSG00010002059) ENSBMSG00010001976 PPARGC1A (ENSBMSG00010001849) DHX15 (ENSBMSG00010001763) CCDC149 (ENSBMSG00010001719) #9 LGI2 (ENSBMSG00010001673) #10 SEPSECS (ENSBMSG00010001650) #11 PI4K2B (ENSBMSG00010001625) #12 ZCCHC4 (ENSBMSG00010001603) #14 ANAPC4 (ENSBMSG00010001569) #15 SLC34A2 (ENSBMSG00010001530) #18 SEL1L3 (ENSBMSG00010001472) #19 SMIM20 (ENSBMSG00010001389) #20 ENSBMSG00010001239 #22 CCKAR (ENSBMSG00010001131) #23 TBC1D19 (ENSBMSG00010001070) #24 ENSBMSG00010001022 STIM2 (ENSBMSG00010000991) #25 ENSBMSG00010000959 PCDH7 (ENSBMSG00010000937) #28 ENSBMSG00010000928 ARAP2 (ENSBMSG00010000782) #37 DTHD1 (ENSBMSG00010000578) ENSBMSG00010000528 ENSBMSG00010000513 NWD2 (ENSBMSG00010000492) C4orf19 (ENSBMSG00010000470) RELL1 (ENSBMSG00010000412) PGM2 (ENSBMSG00010000369) Atlantogenata ANCESTRAL SPECIES 46 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 Afrotheria ANCESTRAL SPECIES 53 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 ENSGT00390000010054.b Afrotheria_a ANCESTRAL SPECIES 50 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162884 ENSGT00940000162201 ENSGT00390000010054.b Hyrax MODERN SPECIES 5170 RBPJ (ENSPCAG00000003550) #22 Elephant MODERN SPECIES 164 GBA3 (ENSLAFG00000029577) ENSLAFG00000030988 PPARGC1A (ENSLAFG00000012981) DHX15 (ENSLAFG00000005466) SOD3 (ENSLAFG00000022899) #7 CCDC149 (ENSLAFG00000007108) #9 LGI2 (ENSLAFG00000002475) #10 SEPSECS (ENSLAFG00000010804) #11 PI4K2B (ENSLAFG00000012228) #12 ZCCHC4 (ENSLAFG00000012234) #14 ANAPC4 (ENSLAFG00000012242) #15 ENSLAFG00000026426 #18 ENSLAFG00000013325 #18 SEL1L3 (ENSLAFG00000012362) #19 ENSLAFG00000007091 #20 RBPJ (ENSLAFG00000000410) #22 CCKAR (ENSLAFG00000000294) #23 TBC1D19 (ENSLAFG00000009636) #24 STIM2 (ENSLAFG00000003344) #25 PCDH7 (ENSLAFG00000010937) #28 ARAP2 (ENSLAFG00000003991) #37 NWD2 (ENSLAFG00000020908) C4orf19 (ENSLAFG00000030311) RELL1 (ENSLAFG00000016276) PGM2 (ENSLAFG00000005067) TBC1D1 (ENSLAFG00000005076) KLF3 (ENSLAFG00000032166) TLR10 (ENSLAFG00000008544) TLR1 (ENSLAFG00000008549) TLR6 (ENSLAFG00000032091) FAM114A1 (ENSLAFG00000013559) Xenarthra ANCESTRAL SPECIES ENSGT00390000005197.a #22 Sloth MODERN SPECIES 5611 RBPJ (ENSCHOG00000001582) #22 Armadillo MODERN SPECIES 1850 PPARGC1A (ENSDNOG00000041106) DHX15 (ENSDNOG00000014438) SOD3 (ENSDNOG00000024793) #7 CCDC149 (ENSDNOG00000038755) #9 LGI2 (ENSDNOG00000037791) #10 SEPSECS (ENSDNOG00000049494) #11 PI4K2B (ENSDNOG00000044369) #12 ZCCHC4 (ENSDNOG00000004525) #14 ANAPC4 (ENSDNOG00000032226) #15 ENSDNOG00000032662 SLC34A2 (ENSDNOG00000032564) #18 ENSDNOG00000039515 SEL1L3 (ENSDNOG00000004313) #19 ENSDNOG00000043946 #20 ENSDNOG00000043501 RBPJ (ENSDNOG00000035383) #22 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b.q #18 ENSGT00950000183177.a.a.b.r #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162201 Opossum MODERN SPECIES 4 SEPSECS (ENSMODG00000000423) #11 PI4K2B (ENSMODG00000000405) #12 ZCCHC4 (ENSMODG00000000388) #14 ENSMODG00000000363 #15 ENSMODG00000000328 #18 ENSMODG00000049518 #18 ENSMODG00000000304 #18 ENSMODG00000041870 #18 ENSMODG00000025532 #18 ENSMODG00000027534 ENSMODG00000025549 #18 ENSMODG00000042552 #18 ENSMODG00000051279 #18 SEL1L3 (ENSMODG00000000154) #19 SMIM20 (ENSMODG00000000137) #20 RBPJ (ENSMODG00000000129) #22 ENSMODG00000047093 ENSMODG00000039806 CCKAR (ENSMODG00000000113) #23 TBC1D19 (ENSMODG00000000109) #24 STIM2 (ENSMODG00000000083) #25 ENSMODG00000046673 PCDH7 (ENSMODG00000024790) #28 ENSMODG00000047017 ARAP2 (ENSMODG00000020518) #37 DTHD1 (ENSMODG00000020520) ENSMODG00000036956 NWD2 (ENSMODG00000040392) ENSMODG00000020525 RELL1 (ENSMODG00000020526) ENSMODG00000020527 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b.q #18 ENSGT00950000183177.a.a.b.r #18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162201 Tasmanian devil MODERN SPECIES 5 SOD3 (ENSSHAG00000010341) #7 CCDC149 (ENSSHAG00000022022) #9 LGI2 (ENSSHAG00000031544) #10 SEPSECS (ENSSHAG00000007001) #11 PI4K2B (ENSSHAG00000031409) #12 ZCCHC4 (ENSSHAG00000004438) #14 ANAPC4 (ENSSHAG00000003402) #15 ENSSHAG00000010251 #18 ENSSHAG00000004649 #18 ENSSHAG00000010890 #18 ENSSHAG00000031795 #18 ENSSHAG00000028205 #18 ENSSHAG00000023004 #18 SEL1L3 (ENSSHAG00000009419) #19 ENSSHAG00000030717 #20 RBPJ (ENSSHAG00000003329) #22 CCKAR (ENSSHAG00000000403) #23 TBC1D19 (ENSSHAG00000009955) #24 STIM2 (ENSSHAG00000008249) #25 ENSSHAG00000023484 PCDH7 (ENSSHAG00000010841) #28 ENSSHAG00000030937 ENSSHAG00000020576 ARAP2 (ENSSHAG00000011185) #37 DTHD1 (ENSSHAG00000010416) NWD2 (ENSSHAG00000005236) ENSSHAG00000002940 RELL1 (ENSSHAG00000023710) PGM2 (ENSSHAG00000005459) TBC1D1 (ENSSHAG00000013165) KLF3 (ENSSHAG00000026965) Diprotodontia ANCESTRAL SPECIES 10 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b.q #18 ENSGT00940000159983 #19 ENSGT00390000002398.a #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 ENSGT00940000162201 Wallaby MODERN SPECIES 7611 RBPJ (ENSMEUG00000006588) #22 Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.a.a.b.q #18 ENSGT00940000159983 #19 ENSGT00390000002398.a #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00950000185589 ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000163662 koala MODERN SPECIES 2 KCNIP4 (ENSPCIG00000032533) ADGRA3 (ENSPCIG00000003169) GBA3 (ENSPCIG00000031948) PPARGC1A (ENSPCIG00000015835) DHX15 (ENSPCIG00000004023) SOD3 (ENSPCIG00000004032) #7 CCDC149 (ENSPCIG00000004052) #9 LGI2 (ENSPCIG00000004064) #10 SEPSECS (ENSPCIG00000004071) #11 PI4K2B (ENSPCIG00000004075) #12 ZCCHC4 (ENSPCIG00000004082) #14 ANAPC4 (ENSPCIG00000004096) #15 SLC34A2 (ENSPCIG00000010248) #18 SEL1L3 (ENSPCIG00000020485) #19 ENSPCIG00000020488 #20 RBPJ (ENSPCIG00000020491) #22 CCKAR (ENSPCIG00000020497) #23 TBC1D19 (ENSPCIG00000031776) #24 STIM2 (ENSPCIG00000034168) #25 H2AZ1 (ENSPCIG00000027205) ENSPCIG00000032746 PCDH7 (ENSPCIG00000019678) #28 ENSPCIG00000018003 ARAP2 (ENSPCIG00000035555) #37 DTHD1 (ENSPCIG00000006852) ENSPCIG00000006865 ENSPCIG00000034342 ENSPCIG00000033128 ENSPCIG00000027065 RELL1 (ENSPCIG00000025460) PGM2 (ENSPCIG00000020881) Common wonbat MODERN SPECIES 1054 DHX15 (ENSVURG00010004378) ENSVURG00010004425 #7 CCDC149 (ENSVURG00010004454) #9 LGI2 (ENSVURG00010004467) #10 SEPSECS (ENSVURG00010004502) #11 PI4K2B (ENSVURG00010004516) #12 ZCCHC4 (ENSVURG00010004655) #14 ANAPC4 (ENSVURG00010004724) #15 ENSVURG00010004753 ENSVURG00010004760 ENSVURG00010004770 #18 ENSVURG00010004876 #18 ENSVURG00010005005 SEL1L3 (ENSVURG00010005010) #19 ENSVURG00010005042 #20 RBPJ (ENSVURG00010005079) #22 CCKAR (ENSVURG00010005131) #23 TBC1D19 (ENSVURG00010005165) #24 STIM2 (ENSVURG00010005237) #25 ENSVURG00010005715 PCDH7 (ENSVURG00010005757) #28 ARAP2 (ENSVURG00010005816) #37 DTHD1 (ENSVURG00010005897) ENSVURG00010005913 NWD2 (ENSVURG00010005952) ENSVURG00010006035 RELL1 (ENSVURG00010006044) PGM2 (ENSVURG00010006062) TBC1D1 (ENSVURG00010006143) KLF3 (ENSVURG00010006204) TLR10 (ENSVURG00010006211) Platypus MODERN SPECIES 9 KCNIP4 (ENSOANG00000006672) ADGRA3 (ENSOANG00000006677) GBA3 (ENSOANG00000006679) PPARGC1A (ENSOANG00000006680) DHX15 (ENSOANG00000006682) ENSOANG00000038598 #7 CCDC149 (ENSOANG00000006683) #9 LGI2 (ENSOANG00000041994) #10 SEPSECS (ENSOANG00000045251) #11 PI4K2B (ENSOANG00000006681) #12 ZCCHC4 (ENSOANG00000006688) #14 ANAPC4 (ENSOANG00000006689) #15 SLC34A2 (ENSOANG00000006695) #18 SEL1L3 (ENSOANG00000006697) #19 ENSOANG00000037572 #20 RBPJ (ENSOANG00000006699) #22 CCKAR (ENSOANG00000029819) #23 TBC1D19 (ENSOANG00000006700) #24 STIM2 (ENSOANG00000006701) #25 ENSOANG00000039040 PCDH7 (ENSOANG00000036095) #28 ARAP2 (ENSOANG00000010310) #37 NWD2 (ENSOANG00000010313) RELL1 (ENSOANG00000010314) PGM2 (ENSOANG00000010315) TBC1D1 (ENSOANG00000010316) KLF3 (ENSOANG00000047136) ENSOANG00000047464 ENSOANG00000050732 FAM114A1 (ENSOANG00000010319) ENSOANG00000010321 Sauria ANCESTRAL SPECIES 6 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00940000177623 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Lepidosauria ANCESTRAL SPECIES 9 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 tuatara MODERN SPECIES 363 RBPJ (ENSSPUG00000003632) #22 CCKAR (ENSSPUG00000003639) #23 TBC1D19 (ENSSPUG00000003661) #24 STIM2 (ENSSPUG00000003819) #25 Episquamata ANCESTRAL SPECIES 3 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 ENSGT00390000010054.b Toxicofera ANCESTRAL SPECIES 21 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT01040000242873 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.c ENSGT00390000010054.b Lizard MODERN SPECIES 962 PI4K2B (ENSACAG00000013530) #12 ZCCHC4 (ENSACAG00000013561) #14 ANAPC4 (ENSACAG00000013604) #15 ENSACAG00000035948 ENSACAG00000014383 ##18 SEL1L3 (ENSACAG00000014494) #19 ENSACAG00000014567 RBPJ (ENSACAG00000014578) #22 CCKAR (ENSACAG00000014635) #23 TBC1D19 (ENSACAG00000014660) #24 STIM2 (ENSACAG00000014755) #25 Elapidae ANCESTRAL SPECIES 22 ENSGT00960000189468 ENSGT00390000013532.q ENSGT01060000251732 ENSGT00940000153284.b ENSGT00940000158643 ENSGT00390000011192 ENSGT00940000162578 ENSGT00940000158757 ENSGT00390000003601.b ENSGT00940000156043 ENSGT00940000156021 ENSGT00940000155626 ENSGT00940000156710 ENSGT00940000177623 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.c ENSGT00390000010054.b ENSGT00940000155358 Indian cobra MODERN SPECIES 3 ENSNNAG00000014290 ENSNNAG00000014270 ENSNNAG00000014256 USP46 (ENSNNAG00000014235) ENSNNAG00000014225 RASL11B (ENSNNAG00000014208) SCFD2 (ENSNNAG00000014166) ENSNNAG00000014116 LNX1 (ENSNNAG00000014069) CHIC2 (ENSNNAG00000014042) GSX2 (ENSNNAG00000014028) PDGFRA (ENSNNAG00000010974) KIT (ENSNNAG00000008242) KDR (ENSNNAG00000007823) ENSNNAG00000007785 RBPJ (ENSNNAG00000007657) #22 CCKAR (ENSNNAG00000007585) #23 TBC1D19 (ENSNNAG00000007498) #24 STIM2 (ENSNNAG00000007431) #25 ENSNNAG00000007417 ENSNNAG00000007402 PCDH7 (ENSNNAG00000007378) #28 ENSNNAG00000007360 ENSNNAG00000007348 DTHD1 (ENSNNAG00000007301) NWD2 (ENSNNAG00000007268) RELL1 (ENSNNAG00000007248) PGM2 (ENSNNAG00000007219) TBC1D1 (ENSNNAG00000005416) KLF3 (ENSNNAG00000005269) TLR6 (ENSNNAG00000005256) Elapidae_a ANCESTRAL SPECIES 25 ENSGT00960000189468 ENSGT00390000013532.q ENSGT01060000251732 ENSGT00940000153284.b ENSGT00940000158643 ENSGT00390000011192.e ENSGT00940000162578 ENSGT00940000158757 ENSGT00390000003601.b ENSGT00940000156043 ENSGT00940000156021 ENSGT00940000155626 ENSGT00940000156710 ENSGT00940000177623 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.r ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.c ENSGT00390000010054.b ENSGT00940000155358 Blue-lipped sea krait MODERN SPECIES 3433 RBPJ (ENSLLTG00000005876) #22 Acanthophiinae ANCESTRAL SPECIES 4 ENSGT00960000189468 ENSGT00390000013532.q ENSGT01060000251732 ENSGT00940000153284.b ENSGT00940000158643 ENSGT00390000011192.e ENSGT00940000162578 ENSGT00940000158757 ENSGT00390000003601.b ENSGT00940000156043 ENSGT00940000156021 ENSGT00940000155626 ENSGT00940000156710 ENSGT00940000177623 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247.r ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.c ENSGT00390000010054.b ENSGT00940000155358 Eastern brown snake MODERN SPECIES 12 DCUN1D4 (ENSPTXG00000005914) SGCB (ENSPTXG00000005913) ENSPTXG00000005912 ENSPTXG00000005911 USP46 (ENSPTXG00000005910) RASL11B (ENSPTXG00000005909) SCFD2 (ENSPTXG00000005906) ENSPTXG00000005905 LNX1 (ENSPTXG00000005286) CHIC2 (ENSPTXG00000005285) GSX2 (ENSPTXG00000005284) PDGFRA (ENSPTXG00000005108) KIT (ENSPTXG00000004726) KDR (ENSPTXG00000004719) ENSPTXG00000004718 RBPJ (ENSPTXG00000004716) #22 CCKAR (ENSPTXG00000004707) #23 TBC1D19 (ENSPTXG00000004706) #24 STIM2 (ENSPTXG00000004705) #25 PCDH7 (ENSPTXG00000004704) #28 ARAP2 (ENSPTXG00000004702) #37 DTHD1 (ENSPTXG00000004701) NWD2 (ENSPTXG00000004699) ENSPTXG00000004697 RELL1 (ENSPTXG00000004695) PGM2 (ENSPTXG00000004690) TBC1D1 (ENSPTXG00000003167) KLF3 (ENSPTXG00000003142) TLR6 (ENSPTXG00000003138) FAM114A1 (ENSPTXG00000003136) ENSPTXG00000003133 Mainland tiger snake MODERN SPECIES 367 SMIM20 (ENSNSUG00000011023) #20 RBPJ (ENSNSUG00000011022) #22 ENSNSUG00000011020 CCKAR (ENSNSUG00000010999) #23 TBC1D19 (ENSNSUG00000010844) #24 STIM2 (ENSNSUG00000010832) #25 Laterata ANCESTRAL SPECIES 21 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 ENSGT00390000010054.b Argentine black and white tegu MODERN SPECIES 1 KCNIP4 (ENSSMRG00000001469) ADGRA3 (ENSSMRG00000001520) GBA3 (ENSSMRG00000001542) PPARGC1A (ENSSMRG00000001615) DHX15 (ENSSMRG00000001639) SOD3 (ENSSMRG00000001656) #7 CCDC149 (ENSSMRG00000001694) #9 LGI2 (ENSSMRG00000001701) #10 SEPSECS (ENSSMRG00000001718) #11 PI4K2B (ENSSMRG00000001725) #12 ZCCHC4 (ENSSMRG00000001737) #14 ANAPC4 (ENSSMRG00000001814) #15 ENSSMRG00000001828 ##18 SEL1L3 (ENSSMRG00000001883) #19 SMIM20 (ENSSMRG00000001898) #20 RBPJ (ENSSMRG00000001903) #22 CCKAR (ENSSMRG00000001920) #23 TBC1D19 (ENSSMRG00000001948) #24 STIM2 (ENSSMRG00000001982) #25 ENSSMRG00000002078 ENSSMRG00000002157 PCDH7 (ENSSMRG00000002175) #28 ENSSMRG00000002180 ARAP2 (ENSSMRG00000002189) #37 DTHD1 (ENSSMRG00000002220) NWD2 (ENSSMRG00000002231) ENSSMRG00000002251 RELL1 (ENSSMRG00000002260) PGM2 (ENSSMRG00000002267) TBC1D1 (ENSSMRG00000002348) KLF3 (ENSSMRG00000002464) Common wall lizard MODERN SPECIES 17 SOD3 (ENSPMRG00000012656) #7 CCDC149 (ENSPMRG00000012672) #9 ENSPMRG00000012712 #10 ENSPMRG00000012716 ENSPMRG00000012723 #10 ENSPMRG00000012728 SEPSECS (ENSPMRG00000012735) #11 PI4K2B (ENSPMRG00000012743) #12 ZCCHC4 (ENSPMRG00000012751) #14 ANAPC4 (ENSPMRG00000012834) #15 ENSPMRG00000013386 ENSPMRG00000013390 ##18 SEL1L3 (ENSPMRG00000013412) #19 ENSPMRG00000013495 ENSPMRG00000013498 RBPJ (ENSPMRG00000013511) #22 CCKAR (ENSPMRG00000013536) #23 TBC1D19 (ENSPMRG00000013570) #24 STIM2 (ENSPMRG00000013643) #25 ENSPMRG00000013648 PCDH7 (ENSPMRG00000013653) #28 ENSPMRG00000013659 ENSPMRG00000013663 ENSPMRG00000013667 ENSPMRG00000013671 ARAP2 (ENSPMRG00000013685) #37 ENSPMRG00000013752 DTHD1 (ENSPMRG00000013757) ENSPMRG00000013760 ENSPMRG00000013775 ENSPMRG00000013784 Archelosauria ANCESTRAL SPECIES 4 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201 Australian saltwater crocodile MODERN SPECIES 65 ENSCPRG00005004791 ADGRA3 (ENSCPRG00005004846) PPARGC1A (ENSCPRG00005004873) ENSCPRG00005004898 DHX15 (ENSCPRG00005004902) SOD3 (ENSCPRG00005004903) #7 CCDC149 (ENSCPRG00005004911) #9 LGI2 (ENSCPRG00005004932) #10 SEPSECS (ENSCPRG00005004978) #11 PI4K2B (ENSCPRG00005004981) #12 ZCCHC4 (ENSCPRG00005004986) #14 ANAPC4 (ENSCPRG00005005005) #15 ENSCPRG00005005064 ##18 SEL1L3 (ENSCPRG00005005084) #19 SMIM20 (ENSCPRG00005005197) #20 RBPJ (ENSCPRG00005005213) #22 CCKAR (ENSCPRG00005005217) #23 TBC1D19 (ENSCPRG00005005240) #24 STIM2 (ENSCPRG00005005298) #25 PCDH7 (ENSCPRG00005005388) #28 RPS29 (ENSCPRG00005005404) ENSCPRG00005005412 TIMM17B (ENSCPRG00005005430) ARAP2 (ENSCPRG00005005447) #37 DTHD1 (ENSCPRG00005005494) NWD2 (ENSCPRG00005005535) C4orf19 (ENSCPRG00005005560) RELL1 (ENSCPRG00005005574) PGM2 (ENSCPRG00005005602) TBC1D1 (ENSCPRG00005005626) KLF3 (ENSCPRG00005005693) Aves ANCESTRAL SPECIES 3 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j African ostrich MODERN SPECIES 548 PACRGL (ENSSCUG00000006427) KCNIP4 (ENSSCUG00000006432) ADGRA3 (ENSSCUG00000006446) GBA3 (ENSSCUG00000006451) PPARGC1A (ENSSCUG00000006459) DHX15 (ENSSCUG00000006468) SOD3 (ENSSCUG00000006470) #7 CCDC149 (ENSSCUG00000006474) #9 LGI2 (ENSSCUG00000006480) #10 SEPSECS (ENSSCUG00000006488) #11 PI4K2B (ENSSCUG00000006495) #12 ZCCHC4 (ENSSCUG00000006498) #14 ANAPC4 (ENSSCUG00000006515) #15 ENSSCUG00000006534 ##18 SEL1L3 (ENSSCUG00000006536) #19 RBPJ (ENSSCUG00000006539) #22 CCKAR (ENSSCUG00000006541) #23 TBC1D19 (ENSSCUG00000006542) #24 STIM2 (ENSSCUG00000006544) #25 PCDH7 (ENSSCUG00000006563) #28 ENSSCUG00000006572 ARAP2 (ENSSCUG00000006577) #37 DTHD1 (ENSSCUG00000006590) NWD2 (ENSSCUG00000006593) C4orf19 (ENSSCUG00000006603) RELL1 (ENSSCUG00000006607) PGM2 (ENSSCUG00000006613) TBC1D1 (ENSSCUG00000006618) KLF3 (ENSSCUG00000006627) ENSSCUG00000006629 FAM114A1 (ENSSCUG00000006635) Neognathae ANCESTRAL SPECIES 5 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j Galloanserae ANCESTRAL SPECIES 5 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Japanese quail MODERN SPECIES 22 KCNIP4 (ENSCJPG00005018389) ADGRA3 (ENSCJPG00005018386) PPARGC1A (ENSCJPG00005018379) DHX15 (ENSCJPG00005018376) SOD3 (ENSCJPG00005018375) #7 CCDC149 (ENSCJPG00005018374) #9 LGI2 (ENSCJPG00005018373) #10 ENSCJPG00005018372 SEPSECS (ENSCJPG00005018371) #11 PI4K2B (ENSCJPG00005018370) #12 ZCCHC4 (ENSCJPG00005018369) #14 ANAPC4 (ENSCJPG00005018368) #15 ENSCJPG00005018366 ##18 SEL1L3 (ENSCJPG00005018359) #19 SMIM20 (ENSCJPG00005018355) #20 RBPJ (ENSCJPG00005018352) #22 CCKAR (ENSCJPG00005018351) #23 TBC1D19 (ENSCJPG00005018350) #24 STIM2 (ENSCJPG00005018349) #25 PCDH7 (ENSCJPG00005018339) #28 ARAP2 (ENSCJPG00005018329) #37 DTHD1 (ENSCJPG00005018328) NWD2 (ENSCJPG00005018327) C4orf19 (ENSCJPG00005018326) RELL1 (ENSCJPG00005018325) PGM2 (ENSCJPG00005018323) TBC1D1 (ENSCJPG00005018321) KLF3 (ENSCJPG00005018317) TLR6 (ENSCJPG00005018284) FAM114A1 (ENSCJPG00005018282) KLHL5 (ENSCJPG00005018217) Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Chicken MODERN SPECIES 33 ADGRA3 (ENSGALG00010009200) ENSGALG00010010027 PPARGC1A (ENSGALG00010010006) DHX15 (ENSGALG00010009943) SOD3 (ENSGALG00010009833) #7 CCDC149 (ENSGALG00010009728) #9 LGI2 (ENSGALG00010010178) #10 ENSGALG00010010175 SEPSECS (ENSGALG00010010161) #11 PI4K2B (ENSGALG00010010945) #12 ZCCHC4 (ENSGALG00010010939) #14 ANAPC4 (ENSGALG00010010933) #15 SLC34A2 (ENSGALG00010010900) ##18 SEL1L3 (ENSGALG00010010857) #19 SMIM20 (ENSGALG00010010853) #20 RBPJ (ENSGALG00010010837) #22 CCKAR (ENSGALG00010010732) #23 TBC1D19 (ENSGALG00010010722) #24 STIM2 (ENSGALG00010010685) #25 PCDH7 (ENSGALG00010009266) #28 ENSGALG00010011667 ENSGALG00010014270 ARAP2 (ENSGALG00010014705) #37 DTHD1 (ENSGALG00010014681) NWD2 (ENSGALG00010014632) C4orf19 (ENSGALG00010014455) RELL1 (ENSGALG00010015353) PGM2 (ENSGALG00010015310) TBC1D1 (ENSGALG00010015200) KLF3 (ENSGALG00010015165) TLR1A (ENSGALG00010015119) Turkey MODERN SPECIES 24 PACRGL (ENSMGAG00000012511) KCNIP4 (ENSMGAG00000012506) ADGRA3 (ENSMGAG00000012495) PPARGC1A (ENSMGAG00000012485) DHX15 (ENSMGAG00000012477) SOD3 (ENSMGAG00000012473) #7 CCDC149 (ENSMGAG00000012469) #9 LGI2 (ENSMGAG00000012466) #10 SEPSECS (ENSMGAG00000012465) #11 PI4K2B (ENSMGAG00000012457) #12 ZCCHC4 (ENSMGAG00000012455) #14 ANAPC4 (ENSMGAG00000012445) #15 ENSMGAG00000012440 ##18 SEL1L3 (ENSMGAG00000012431) #19 SMIM20 (ENSMGAG00000018966) #20 RBPJ (ENSMGAG00000012418) #22 CCKAR (ENSMGAG00000012415) #23 TBC1D19 (ENSMGAG00000012405) #24 STIM2 (ENSMGAG00000012398) #25 PCDH7 (ENSMGAG00000010521) #28 ARAP2 (ENSMGAG00000012390) #37 DTHD1 (ENSMGAG00000012392) ENSMGAG00000017111 NWD2 (ENSMGAG00000012386) C4orf19 (ENSMGAG00000012379) RELL1 (ENSMGAG00000012380) PGM2 (ENSMGAG00000012371) TBC1D1 (ENSMGAG00000012368) KLF3 (ENSMGAG00000012365) ENSMGAG00000020268 ENSMGAG00000015741 Anatidae ANCESTRAL SPECIES 2 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i ENSGT00390000010054.b Pink-footed goose MODERN SPECIES 57 KCNIP4 (ENSABRG00000014740) ADGRA3 (ENSABRG00000014750) ENSABRG00000014762 PPARGC1A (ENSABRG00000014767) DHX15 (ENSABRG00000014781) SOD3 (ENSABRG00000014787) #7 CCDC149 (ENSABRG00000014788) #9 LGI2 (ENSABRG00000014793) #10 SEPSECS (ENSABRG00000014796) #11 PI4K2B (ENSABRG00000014824) #12 ZCCHC4 (ENSABRG00000014832) #14 ANAPC4 (ENSABRG00000014877) #15 ENSABRG00000015346 ##18 SEL1L3 (ENSABRG00000015358) #19 ENSABRG00000015367 #20 RBPJ (ENSABRG00000015380) #22 CCKAR (ENSABRG00000015392) #23 Duck MODERN SPECIES 22 PACRGL (ENSAPLG00000009745) KCNIP4 (ENSAPLG00000009534) ADGRA3 (ENSAPLG00000009086) PPARGC1A (ENSAPLG00000005303) DHX15 (ENSAPLG00000005889) SOD3 (ENSAPLG00000001811) #7 CCDC149 (ENSAPLG00000010671) #9 LGI2 (ENSAPLG00000019636) #10 SEPSECS (ENSAPLG00000009962) #11 PI4K2B (ENSAPLG00000009723) #12 ZCCHC4 (ENSAPLG00000009717) #14 ENSAPLG00000016667 #15 ENSAPLG00000008254 ##18 SEL1L3 (ENSAPLG00000007928) #19 SMIM20 (ENSAPLG00000026829) #20 RBPJ (ENSAPLG00000007512) #22 ENSAPLG00000020697 CCKAR (ENSAPLG00000025740) #23 TBC1D19 (ENSAPLG00000007019) #24 STIM2 (ENSAPLG00000006859) #25 ENSAPLG00000024292 ENSAPLG00000026215 ENSAPLG00000030723 PCDH7 (ENSAPLG00000027438) #28 ARAP2 (ENSAPLG00000013894) #37 DTHD1 (ENSAPLG00000014119) NWD2 (ENSAPLG00000004933) C4orf19 (ENSAPLG00000027520) RELL1 (ENSAPLG00000008800) PGM2 (ENSAPLG00000008271) TBC1D1 (ENSAPLG00000007546) Neognathae_b ANCESTRAL SPECIES 4 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Passeriformes ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Great tit MODERN SPECIES 23 SLIT2 (ENSPMJG00000016326) PACRGL (ENSPMJG00000016324) KCNIP4 (ENSPMJG00000016323) ADGRA3 (ENSPMJG00000016320) PPARGC1A (ENSPMJG00000016314) DHX15 (ENSPMJG00000016312) SOD3 (ENSPMJG00000016311) #7 CCDC149 (ENSPMJG00000016310) #9 LGI2 (ENSPMJG00000016309) #10 PI4K2B (ENSPMJG00000016308) #12 ZCCHC4 (ENSPMJG00000016307) #14 ANAPC4 (ENSPMJG00000016306) #15 ENSPMJG00000016305 ##18 SEL1L3 (ENSPMJG00000016304) #19 SMIM20 (ENSPMJG00000016303) #20 RBPJ (ENSPMJG00000016301) #22 CCKAR (ENSPMJG00000016300) #23 TBC1D19 (ENSPMJG00000016299) #24 STIM2 (ENSPMJG00000016298) #25 ENSPMJG00000016294 PCDH7 (ENSPMJG00000016293) #28 ARAP2 (ENSPMJG00000016289) #37 NWD2 (ENSPMJG00000016287) C4orf19 (ENSPMJG00000016285) RELL1 (ENSPMJG00000016284) PGM2 (ENSPMJG00000016283) TBC1D1 (ENSPMJG00000016282) KLF3 (ENSPMJG00000016275) ENSPMJG00000016274 ENSPMJG00000016273 FAM114A1 (ENSPMJG00000016272) Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Flycatcher MODERN SPECIES 22 SLIT2 (ENSFALG00000009223) PACRGL (ENSFALG00000009221) KCNIP4 (ENSFALG00000009214) ADGRA3 (ENSFALG00000009212) PPARGC1A (ENSFALG00000009211) DHX15 (ENSFALG00000009210) SOD3 (ENSFALG00000014662) #7 CCDC149 (ENSFALG00000009207) #9 LGI2 (ENSFALG00000024523) #10 SEPSECS (ENSFALG00000009193) #11 PI4K2B (ENSFALG00000009183) #12 ANAPC4 (ENSFALG00000009180) #15 ENSFALG00000009167 ##18 SEL1L3 (ENSFALG00000009157) #19 SMIM20 (ENSFALG00000009156) #20 RBPJ (ENSFALG00000028202) #22 CCKAR (ENSFALG00000009150) #23 TBC1D19 (ENSFALG00000009147) #24 STIM2 (ENSFALG00000009145) #25 ENSFALG00000024970 PCDH7 (ENSFALG00000009140) #28 ENSFALG00000028447 #28 ENSFALG00000009389 ARAP2 (ENSFALG00000009360) #37 NWD2 (ENSFALG00000009352) ENSFALG00000026554 RELL1 (ENSFALG00000026363) PGM2 (ENSFALG00000009335) TBC1D1 (ENSFALG00000009329) KLF3 (ENSFALG00000023461) ENSFALG00000014902 Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a.a ENSGT00950000183137.b.a.b ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Medium ground finch MODERN SPECIES KCNIP4 (ENSGFOG00000001224) ADGRA3 (ENSGFOG00000001255) ENSGFOG00000001383 ENSGFOG00000001391 DHX15 (ENSGFOG00000001405) SOD3 (ENSGFOG00000001424) #7 CCDC149 (ENSGFOG00000001434) #9 LGI2 (ENSGFOG00000001453) #10 SEPSECS (ENSGFOG00000001468) #11 PI4K2B (ENSGFOG00000001541) #12 ZCCHC4 (ENSGFOG00000001560) #14 ANAPC4 (ENSGFOG00000001587) #15 ENSGFOG00000001618 ##18 SEL1L3 (ENSGFOG00000001635) #19 ENSGFOG00000001653 RBPJ (ENSGFOG00000001663) #22 CCKAR (ENSGFOG00000001670) #23 TBC1D19 (ENSGFOG00000001691) #24 STIM2 (ENSGFOG00000001728) #25 PCDH7 (ENSGFOG00000001767) #28 ARAP2 (ENSGFOG00000001784) #37 NWD2 (ENSGFOG00000001843) ENSGFOG00000001851 RELL1 (ENSGFOG00000001863) PGM2 (ENSGFOG00000001868) TBC1D1 (ENSGFOG00000001882) KLF3 (ENSGFOG00000001925) ENSGFOG00000001932 ENSGFOG00000001940 ENSGFOG00000001947 KLHL5 (ENSGFOG00000001967) Passeroidea ANCESTRAL SPECIES 4 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a.a ENSGT00950000183137.b.a.b ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i Zebra finch MODERN SPECIES 25 PACRGL (ENSTGUG00000009573) KCNIP4 (ENSTGUG00000009548) ADGRA3 (ENSTGUG00000009517) PPARGC1A (ENSTGUG00000009487) DHX15 (ENSTGUG00000009452) SOD3 (ENSTGUG00000009451) #7 CCDC149 (ENSTGUG00000009438) #9 LGI2 (ENSTGUG00000021263) #10 SEPSECS (ENSTGUG00000009417) #11 PI4K2B (ENSTGUG00000009404) #12 ZCCHC4 (ENSTGUG00000009397) #14 ANAPC4 (ENSTGUG00000009328) #15 ENSTGUG00000009289 ##18 SEL1L3 (ENSTGUG00000009265) #19 SMIM20 (ENSTGUG00000009263) #20 RBPJ (ENSTGUG00000009245) #22 CCKAR (ENSTGUG00000009230) #23 TBC1D19 (ENSTGUG00000009193) #24 STIM2 (ENSTGUG00000009177) #25 ENSTGUG00000025253 PCDH7 (ENSTGUG00000009172) #28 ENSTGUG00000028708 ARAP2 (ENSTGUG00000009152) #37 DTHD1 (ENSTGUG00000009149) NWD2 (ENSTGUG00000009144) C4orf19 (ENSTGUG00000020799) RELL1 (ENSTGUG00000009141) PGM2 (ENSTGUG00000009108) TBC1D1 (ENSTGUG00000009056) KLF3 (ENSTGUG00000009046) ENSTGUG00000027436 Common canary MODERN SPECIES 2 PACRGL (ENSSCAG00000004596) KCNIP4 (ENSSCAG00000004606) ADGRA3 (ENSSCAG00000004631) PPARGC1A (ENSSCAG00000004681) DHX15 (ENSSCAG00000004696) SOD3 (ENSSCAG00000004707) #7 CCDC149 (ENSSCAG00000004710) #9 LGI2 (ENSSCAG00000004718) #10 SEPSECS (ENSSCAG00000004722) #11 PI4K2B (ENSSCAG00000004729) #12 ZCCHC4 (ENSSCAG00000004739) #14 ANAPC4 (ENSSCAG00000004765) #15 ENSSCAG00000004791 ##18 SEL1L3 (ENSSCAG00000004798) #19 SMIM20 (ENSSCAG00000004809) #20 RBPJ (ENSSCAG00000004817) #22 CCKAR (ENSSCAG00000004827) #23 TBC1D19 (ENSSCAG00000004860) #24 STIM2 (ENSSCAG00000004950) #25 ENSSCAG00000005042 PCDH7 (ENSSCAG00000005046) #28 ARAP2 (ENSSCAG00000005112) #37 DTHD1 (ENSSCAG00000005246) ENSSCAG00000005268 ENSSCAG00000005284 NWD2 (ENSSCAG00000005289) C4orf19 (ENSSCAG00000005294) RELL1 (ENSSCAG00000005297) PGM2 (ENSSCAG00000005299) TBC1D1 (ENSSCAG00000005305) KLF3 (ENSSCAG00000005339) Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000158985 ENSGT00940000157235 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.j ENSGT00940000162201.i ENSGT00990000210295 Kakapo MODERN SPECIES 24 ENSSHBG00005017723 PPARGC1A (ENSSHBG00005017729) DHX15 (ENSSHBG00005017735) SOD3 (ENSSHBG00005017737) #7 CCDC149 (ENSSHBG00005017766) #9 LGI2 (ENSSHBG00005017808) #10 SEPSECS (ENSSHBG00005017996) #11 PI4K2B (ENSSHBG00005018001) #12 ZCCHC4 (ENSSHBG00005018004) #14 ENSSHBG00005018011 #15 ENSSHBG00005018018 #15 ENSSHBG00005018026 ##18 SEL1L3 (ENSSHBG00005018031) #19 ENSSHBG00005018035 #20 ENSSHBG00005018043 RBPJ (ENSSHBG00005018048) #22 CCKAR (ENSSHBG00005018052) #23 TBC1D19 (ENSSHBG00005018056) #24 STIM2 (ENSSHBG00005018062) #25 ENSSHBG00005018070 PCDH7 (ENSSHBG00005018087) #28 DTHD1 (ENSSHBG00005018104) NWD2 (ENSSHBG00005018109) C4orf19 (ENSSHBG00005018114) RELL1 (ENSSHBG00005018119) PGM2 (ENSSHBG00005018123) TBC1D1 (ENSSHBG00005018155) KLF3 (ENSSHBG00005018273) TLR6 (ENSSHBG00005000935) ENSSHBG00005000955 ENSSHBG00005000963 Golden eagle MODERN SPECIES PACRGL (ENSACCG00020000198) KCNIP4 (ENSACCG00020000199) ADGRA3 (ENSACCG00020000200) PPARGC1A (ENSACCG00020000201) DHX15 (ENSACCG00020000202) SOD3 (ENSACCG00020000203) #7 CCDC149 (ENSACCG00020000204) #9 LGI2 (ENSACCG00020000205) #10 SEPSECS (ENSACCG00020000206) #11 PI4K2B (ENSACCG00020000207) #12 ZCCHC4 (ENSACCG00020000208) #14 ANAPC4 (ENSACCG00020000209) #15 ENSACCG00020000210 ##18 SEL1L3 (ENSACCG00020000211) #19 SMIM20 (ENSACCG00020000212) #20 RBPJ (ENSACCG00020000213) #22 CCKAR (ENSACCG00020000214) #23 TBC1D19 (ENSACCG00020000215) #24 STIM2 (ENSACCG00020000216) #25 ENSACCG00020000217 ENSACCG00020000218 #28 ENSACCG00020000219 #28 ARAP2 (ENSACCG00020000221) #37 DTHD1 (ENSACCG00020000222) NWD2 (ENSACCG00020000223) C4orf19 (ENSACCG00020000224) RELL1 (ENSACCG00020000225) PGM2 (ENSACCG00020000226) TBC1D1 (ENSACCG00020000227) KLF3 (ENSACCG00020000228) ENSACCG00020000229 Cryptodira ANCESTRAL SPECIES 2 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Chinese turtle MODERN SPECIES 2222 GBA3 (ENSPSIG00000011741) PPARGC1A (ENSPSIG00000011790) DHX15 (ENSPSIG00000013524) SOD3 (ENSPSIG00000014347) #7 CCDC149 (ENSPSIG00000014502) #9 LGI2 (ENSPSIG00000014639) #10 SEPSECS (ENSPSIG00000014906) #11 PI4K2B (ENSPSIG00000015479) #12 ZCCHC4 (ENSPSIG00000015625) #14 ANAPC4 (ENSPSIG00000015647) #15 ENSPSIG00000016305 ##18 ENSPSIG00000016641 #19 ENSPSIG00000016650 #19 ENSPSIG00000000844 SMIM20 (ENSPSIG00000016781) #20 RBPJ (ENSPSIG00000016822) #22 CCKAR (ENSPSIG00000016827) #23 TBC1D19 (ENSPSIG00000017104) #24 STIM2 (ENSPSIG00000017515) #25 ENSPSIG00000000850 ENSPSIG00000006788 #28 ENSPSIG00000000857 #28 ENSPSIG00000006830 ABCG8 (ENSPSIG00000007213) ABCG5 (ENSPSIG00000010209) DYNC2LI1 (ENSPSIG00000010815) PLEKHH2 (ENSPSIG00000011173) THADA (ENSPSIG00000011388) ENSPSIG00000017136 Testudinoidea ANCESTRAL SPECIES 10 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Emydidae ANCESTRAL SPECIES 1 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.l painted turtle MODERN SPECIES 15 KCNIP4 (ENSCPBG00000027922) ADGRA3 (ENSCPBG00000027926) GBA3 (ENSCPBG00000027931) PPARGC1A (ENSCPBG00000027936) DHX15 (ENSCPBG00000027946) SOD3 (ENSCPBG00000027950) #7 CCDC149 (ENSCPBG00000027952) #9 LGI2 (ENSCPBG00000027955) #10 SEPSECS (ENSCPBG00000027958) #11 PI4K2B (ENSCPBG00000027959) #12 ZCCHC4 (ENSCPBG00000027961) #14 ANAPC4 (ENSCPBG00000027964) #15 ENSCPBG00000027967 ##18 SEL1L3 (ENSCPBG00000027969) #19 SMIM20 (ENSCPBG00000027970) #20 RBPJ (ENSCPBG00000027973) #22 CCKAR (ENSCPBG00000027976) #23 TBC1D19 (ENSCPBG00000027982) #24 STIM2 (ENSCPBG00000027991) #25 ENSCPBG00000027993 ENSCPBG00000027995 PCDH7 (ENSCPBG00000028002) #28 ENSCPBG00000028004 ANO5 (ENSCPBG00000028008) ENSCPBG00000028010 SLC17A6 (ENSCPBG00000028011) FANCF (ENSCPBG00000028012) GAS2 (ENSCPBG00000028013) LUZP2 (ENSCPBG00000028015) ANO3 (ENSCPBG00000028019) MUC15 (ENSCPBG00000028023) Three-toed box turtle MODERN SPECIES 26 KCNIP4 (ENSTMTG00000002466) ADGRA3 (ENSTMTG00000002458) GBA3 (ENSTMTG00000002452) PPARGC1A (ENSTMTG00000002447) DHX15 (ENSTMTG00000002439) SOD3 (ENSTMTG00000002436) #7 CCDC149 (ENSTMTG00000002431) #9 LGI2 (ENSTMTG00000002426) #10 SEPSECS (ENSTMTG00000002424) #11 PI4K2B (ENSTMTG00000002417) #12 ZCCHC4 (ENSTMTG00000002410) #14 ANAPC4 (ENSTMTG00000002376) #15 ENSTMTG00000002359 ##18 SEL1L3 (ENSTMTG00000002230) #19 ENSTMTG00000002188 RBPJ (ENSTMTG00000002176) #22 CCKAR (ENSTMTG00000002168) #23 TBC1D19 (ENSTMTG00000002117) #24 STIM2 (ENSTMTG00000002059) #25 ENSTMTG00000002043 ENSTMTG00000002037 #28 ENSTMTG00000002030 #28 ENSTMTG00000002023 ENSTMTG00000002014 ENSTMTG00000002010 ARAP2 (ENSTMTG00000001989) #37 DTHD1 (ENSTMTG00000001942) ENSTMTG00000001921 NWD2 (ENSTMTG00000001912) C4orf19 (ENSTMTG00000001898) RELL1 (ENSTMTG00000001889) Testudinidae ANCESTRAL SPECIES 11 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00550000074828.a.b ENSGT00940000157221.r #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000165320 ENSGT00940000153648.b ENSGT00390000013778 ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 Goode s thornscrub tortoise MODERN SPECIES 19 ADGRA3 (ENSGEVG00005017643) ENSGEVG00005017685 GBA3 (ENSGEVG00005017692) PPARGC1A (ENSGEVG00005017736) DHX15 (ENSGEVG00005017920) SOD3 (ENSGEVG00005017946) #7 CCDC149 (ENSGEVG00005017958) #9 LGI2 (ENSGEVG00005017978) #10 SEPSECS (ENSGEVG00005018007) #11 PI4K2B (ENSGEVG00005018044) #12 ZCCHC4 (ENSGEVG00005018084) #14 ANAPC4 (ENSGEVG00005018145) #15 ENSGEVG00005018253 ##18 SEL1L3 (ENSGEVG00005018390) #19 SMIM20 (ENSGEVG00005018677) #20 RBPJ (ENSGEVG00005018699) #22 CCKAR (ENSGEVG00005018734) #23 TBC1D19 (ENSGEVG00005018764) #24 STIM2 (ENSGEVG00005018809) #25 ENSGEVG00005018826 ENSGEVG00005018842 ENSGEVG00005018852 #28 ENSGEVG00005018865 #28 ARAP2 (ENSGEVG00005018912) #37 DTHD1 (ENSGEVG00005019031) ENSGEVG00005004128 NWD2 (ENSGEVG00005004151) C4orf19 (ENSGEVG00005004186) RELL1 (ENSGEVG00005004232) PGM2 (ENSGEVG00005004263) ENSGEVG00005004286 Abingdon island giant tortoise MODERN SPECIES 2365 SOD3 (ENSCABG00000003003) #7 CCDC149 (ENSCABG00000003000) #9 LGI2 (ENSCABG00000002903) #10 SEPSECS (ENSCABG00000002892) #11 PI4K2B (ENSCABG00000002889) #12 ZCCHC4 (ENSCABG00000002879) #14 ANAPC4 (ENSCABG00000002861) #15 ENSCABG00000002847 ##18 SEL1L3 (ENSCABG00000002785) #19 SMIM20 (ENSCABG00000002779) #20 ENSCABG00000002776 RBPJ (ENSCABG00000002773) #22 CCKAR (ENSCABG00000002770) #23 TBC1D19 (ENSCABG00000002619) #24 STIM2 (ENSCABG00000002594) #25 Anura ANCESTRAL SPECIES 2 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a ENSGT00940000155800 ENSGT00940000162224 #7 ENSGT00390000015958 #9 ENSGT00940000157294 #10 ENSGT00390000007332 #11 ENSGT00390000010434.a #12 ENSGT00390000012556 #14 ENSGT00390000004612 #15 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #28 ENSGT01030000234945 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT00940000157949 ENSGT00940000157456 ENSGT00940000162201.b ENSGT00940000162201.a ENSGT00390000010054.b Frog MODERN SPECIES ENSXETG00000036897 ppargc1a (ENSXETG00000020468) dhx15 (ENSXETG00000002123) sod3 (ENSXETG00000002122) #7 ccdc149 (ENSXETG00000002121) #9 lgi2 (ENSXETG00000002120) #10 sepsecs (ENSXETG00000002119) #11 ENSXETG00000046969 ENSXETG00000020344 pi4k2b (ENSXETG00000000962) #12 zcchc4 (ENSXETG00000000960) #14 anapc4 (ENSXETG00000000957) #15 slc34a2 (ENSXETG00000000954) ##18 sel1l3 (ENSXETG00000000947) #19 smim20 (ENSXETG00000043460) #20 rbpj (ENSXETG00000046629) #22 cckar (ENSXETG00000000911) #23 tbc1d19 (ENSXETG00000000906) #24 stim2 (ENSXETG00000043520) #25 ENSXETG00000047147 ENSXETG00000048313 ENSXETG00000038696 #25 pcdh7 (ENSXETG00000022281) #28 ENSXETG00000044050 ENSXETG00000045277 ENSXETG00000042544 arap2 (ENSXETG00000030656) #37 dthd1 (ENSXETG00000010149) nwd2 (ENSXETG00000010150) rell1 (ENSXETG00000018465) pgm2 (ENSXETG00000018469) Leishan spiny toad MODERN SPECIES ENSLLEG00000003228 ENSLLEG00000003217 DHX15 (ENSLLEG00000003148) SOD3 (ENSLLEG00000003122) #7 CCDC149 (ENSLLEG00000003067) #9 LGI2 (ENSLLEG00000003012) #10 SEPSECS (ENSLLEG00000002935) #11 PI4K2B (ENSLLEG00000002831) #12 ZCCHC4 (ENSLLEG00000002757) #14 ANAPC4 (ENSLLEG00000002614) #15 ENSLLEG00000002565 ENSLLEG00000002525 ##18 SEL1L3 (ENSLLEG00000002464) #19 SMIM20 (ENSLLEG00000002447) #20 ENSLLEG00000002439 RBPJ (ENSLLEG00000002191) #22 CCKAR (ENSLLEG00000002111) #23 TBC1D19 (ENSLLEG00000001951) #24 ENSLLEG00000001885 ENSLLEG00000001875 ENSLLEG00000001870 STIM2 (ENSLLEG00000001772) #25 ENSLLEG00000001744 ENSLLEG00000001733 SUMO4 (ENSLLEG00000001722) PCDH7 (ENSLLEG00000001706) #28 ENSLLEG00000001692 ENSLLEG00000001685 ENSLLEG00000001675 ENSLLEG00000001663 ENSLLEG00000001653 Coelacanth MODERN SPECIES 1048 ENSLACG00000012756 ##18 SEL1L3 (ENSLACG00000011756) #19 RBPJ (ENSLACG00000007296) #22 TBC1D19 (ENSLACG00000001422) #24 Actinopterygii ANCESTRAL SPECIES 48 ENSGT00640000091487 ENSGT01060000248588.a.c.b ENSGT00390000012346 ENSGT00940000155372 ENSGT00950000183130.A ENSGT00940000155988 ENSGT01070000253744.a.b ENSGT00930000151028 ENSGT00940000173647 ENSGT00510000046908.a.a.b ENSGT00390000007586.a.b ENSGT00940000158340 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000160197 #37 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000156247 ENSGT01030000235076 ENSGT00940000157949 ENSGT00940000157456 ENSGT00390000010054.b Reedfish MODERN SPECIES 13 MICU3 (ENSECRG00000001103) fgf20a (ENSECRG00000001076) FAT4 (ENSECRG00000001042) ANKRD50 (ENSECRG00000000997) SPATA5 (ENSECRG00000000946) NUDT6 (ENSECRG00000004232) FGF2 (ENSECRG00000004225) BBS12 (ENSECRG00000004215) ENSECRG00000004207 adad1 (ENSECRG00000004183) kiaa1109 (ENSECRG00000004144) trpc3 (ENSECRG00000004043) bbs7 (ENSECRG00000004022) AADAT (ENSECRG00000004005) mfap3l (ENSECRG00000004003) rbpjb (ENSECRG00000003971) #22 CCKAR (ENSECRG00000003953) #23 tbc1d19 (ENSECRG00000003917) #24 STIM2 (ENSECRG00000003906) #25 ENSECRG00000003896 PCDH7 (ENSECRG00000003889) #28 ENSECRG00000003885 #28 ENSECRG00000003880 ARAP2 (ENSECRG00000003861) #37 DTHD1 (ENSECRG00000003850) ENSECRG00000003845 NWD2 (ENSECRG00000003842) RELL1 (ENSECRG00000003837) pgm2 (ENSECRG00000003830) ENSECRG00000003826 TBC1D1 (ENSECRG00000003819) Neopterygii ANCESTRAL SPECIES 234 ENSGT00510000046908.a.a.b ENSGT00390000007586.a.b ENSGT00940000158340 ENSGT00950000183177.b ##18 ENSGT00940000159983 #19 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00940000159709 Spotted gar MODERN SPECIES 670 nkx3-2 (ENSLOCG00000009892) ENSLOCG00000009884 CPEB2 (ENSLOCG00000009876) C1QTNF7 (ENSLOCG00000009865) CC2D2A (ENSLOCG00000009843) fbxl5 (ENSLOCG00000009829) CD38 (ENSLOCG00000009822) CD38 (ENSLOCG00000009818) TNIP3 (ENSLOCG00000009803) ndnf (ENSLOCG00000009792) prdm5 (ENSLOCG00000009778) ENSLOCG00000018032 ENSLOCG00000009766 ##18 SEL1L3 (ENSLOCG00000009749) #19 smim20 (ENSLOCG00000009742) #20 rbpjb (ENSLOCG00000009731) #22 CCKAR (ENSLOCG00000009722) #23 tbc1d19 (ENSLOCG00000009710) #24 STIM2 (ENSLOCG00000009697) #25 ENSLOCG00000018030 PCDH7 (ENSLOCG00000009687) #28 ENSLOCG00000009676 ENSLOCG00000018028 ENSLOCG00000009670 NWD2 (ENSLOCG00000009653) rell1 (ENSLOCG00000009640) NEK1 (ENSLOCG00000009634) ENSLOCG00000009628 ENSLOCG00000018026 CPLX1 (ENSLOCG00000009620) PCGF3 (ENSLOCG00000009614) Osteoglossocephalai ANCESTRAL SPECIES 308 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT01030000234945 ENSGT00940000157221 #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 Osteoglossiformes ANCESTRAL SPECIES 89 ENSGT00390000002398 #20 ENSGT00390000005197.a #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221 #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 ENSGT00940000156198.c.a ENSGT00530000067117 ENSGT00940000161843 ENSGT00940000161833 ENSGT00940000160449 ENSGT00940000161846 ENSGT00940000160595.b Asian bonytongue MODERN SPECIES 2 ENSSFOG00015026608 ENSSFOG00015028501 cideb (ENSSFOG00015033066) tinf2 (ENSSFOG00015002264) dhrs4 (ENSSFOG00015002275) gmpr2 (ENSSFOG00015002314) NEDD8 (ENSSFOG00015032897) ENSSFOG00015002371 ENSSFOG00015002420 f13a1b (ENSSFOG00015002426) ENSSFOG00015002453 ENSSFOG00015028956 ENSSFOG00015033022 ENSSFOG00015028397 smim20 (ENSSFOG00015006459) #20 rbpjb (ENSSFOG00015026300) #22 CCKAR (ENSSFOG00015033093) #23 tbc1d19 (ENSSFOG00015006278) #24 STIM2 (ENSSFOG00015006168) #25 PCDH7 (ENSSFOG00015006133) #28 ENSSFOG00015006096 NWD2 (ENSSFOG00015006062) zgc:194930 (ENSSFOG00015006057) rell1 (ENSSFOG00015024304) nkx3-2 (ENSSFOG00015030886) RAB28 (ENSSFOG00015025065) ENSSFOG00015028244 ENSSFOG00015025740 HS3ST1 (ENSSFOG00015005823) ENSSFOG00015005790 WDR1 (ENSSFOG00015005746) P. kingsleyae MODERN SPECIES 527 rbpjb (ENSPKIG00000019077) #22 CCKAR (ENSPKIG00000019120) #23 tbc1d19 (ENSPKIG00000019141) #24 STIM2 (ENSPKIG00000019185) #25 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 338 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000154757 ENSGT00940000163443 ENSGT00940000155857.e ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Otomorpha ANCESTRAL SPECIES 256 ENSGT00940000159769.a.b ENSGT00940000155279.C.a.b ENSGT00390000014876 ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e ENSGT00940000155857.e ENSGT00940000163443.m.b ENSGT01060000248860 ENSGT00390000003601.b ENSGT00530000063690.a.a ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727 ENSGT00940000165832 ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00940000159570.a ENSGT00950000183001.b.b.a ENSGT00940000156391.d ENSGT00940000165038.a ENSGT00940000162580.b.b ENSGT00940000161707.a.a ENSGT00390000004855 ENSGT00390000015386.a ENSGT00940000164407.a.a ENSGT00390000015863 Otophysi ANCESTRAL SPECIES 266 ENSGT00390000006284 ENSGT00940000158277.b ENSGT00940000156295.g ENSGT00940000155249.g ENSGT00940000154953.b ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT01030000234940 ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e ENSGT00940000155857.e ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727 ENSGT00940000165832 ENSGT00390000001491.a ENSGT00390000010434.a #12 Characiphysae ANCESTRAL SPECIES 185 ENSGT01030000234532.B.e.a.a.b ENSGT00940000155429.a.b ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00940000154757 ENSGT00970000197336 ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00730000111168 ENSGT00390000006284 ENSGT00940000158277.b.a.a ENSGT00940000156295.g ENSGT00940000154953.b ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT01030000234940 Channel catfish MODERN SPECIES 21 TMOD1 (ENSIPUG00000022289) tdrd7a (ENSIPUG00000022302) stra6l (ENSIPUG00000022319) ENSIPUG00000022338 ENSIPUG00000022347 spink4 (ENSIPUG00000022349) mttp (ENSIPUG00000022354) ENSIPUG00000022363 tmem66 (ENSIPUG00000022370) slc24a2 (ENSIPUG00000022400) tspan5b (ENSIPUG00000022449) fip1l1b (ENSIPUG00000022454) chic2 (ENSIPUG00000022466) ociad1 (ENSIPUG00000022478) slc34a2a (ENSIPUG00000022490) ##18 rbpja (ENSIPUG00000022511) #22 ENSIPUG00000022530 #25 ENSIPUG00000022563 ENSIPUG00000022574 mtus1 (ENSIPUG00000022581) mtmr7 (ENSIPUG00000022607) Vps37a (ENSIPUG00000022622) MICU3 (ENSIPUG00000022639) fgf20 (ENSIPUG00000022642) tusc3 (ENSIPUG00000022649) SGCZ (ENSIPUG00000022660) dlc1 (ENSIPUG00000022684) asah1 (ENSIPUG00000022694) ENSIPUG00000022701 frg1 (ENSIPUG00000022716) fat1 (ENSIPUG00000023405) Characiphysae_b ANCESTRAL SPECIES 168 ENSGT00390000002721 ENSGT00390000013419 ENSGT01030000234532.B.e.a.a.b ENSGT00940000155429.a.b ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00940000154757.rb ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00730000111168 ENSGT00390000006284 ENSGT00940000158277.b.a.a ENSGT00940000156295.g ENSGT00940000154953.b ENSGT00390000014876.a ENSGT00940000155279.C.a.b.eb ENSGT00940000159769.a.b ENSGT01030000234940 ENSGT00970000197745 Electric eel MODERN SPECIES 321 SLC1A1 (ENSEEEG00000024006) tspan5b (ENSEEEG00000024009) ENSEEEG00000024010 chic2 (ENSEEEG00000024013) ENSEEEG00000024014 slc34a2a (ENSEEEG00000024020) ##18 rbpja (ENSEEEG00000024048) #22 ENSEEEG00000024052 #25 ENSEEEG00000024053 wdr26b (ENSEEEG00000024057) fez2b (ENSEEEG00000024065) ENSEEEG00000024067 slc35a1 (ENSEEEG00000024075) rars2 (ENSEEEG00000024085) ENSEEEG00000024103 syncrip (ENSEEEG00000024105) ENSEEEG00000024118 HTR1E (ENSEEEG00000024123) ENSEEEG00000024126 ENSEEEG00000024131 ENSEEEG00000024133 myl13 (ENSEEEG00000024135) Characoidei ANCESTRAL SPECIES 169 ENSGT00940000153246.a.a.b.a ENSGT00940000155244.d ENSGT01000000214976 ENSGT00390000011412 ENSGT00730000111645.b ENSGT00390000002721 ENSGT00390000013419 ENSGT01030000234532.B.e.a.a.b ENSGT00940000155429.a.b ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00940000154757.rb.b ENSGT00940000154757.rb.a.b ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00730000111168 ENSGT00390000006284 ENSGT00940000158277.b.a.a ENSGT00940000156295.g ENSGT00940000154953.b ENSGT00390000014876.a ENSGT00940000155279.C.a.b.eb ENSGT00940000159769.a.b ENSGT01030000234940 Red-bellied piranha MODERN SPECIES 398 ENSPNAG00000015516 ENSPNAG00000015509 mttp (ENSPNAG00000015493) ENSPNAG00000015468 xpa (ENSPNAG00000005330) saraf (ENSPNAG00000015441) slc24a2 (ENSPNAG00000015420) SLC1A1 (ENSPNAG00000015408) tspan5b (ENSPNAG00000015364) fip1l1b (ENSPNAG00000015341) chic2 (ENSPNAG00000015320) ENSPNAG00000015288 slc34a2a (ENSPNAG00000015246) ##18 rbpja (ENSPNAG00000015210) #22 ENSPNAG00000015141 #25 ENSPNAG00000015072 DLC1 (ENSPNAG00000003353) ENSPNAG00000003321 ENSPNAG00000014888 Mexicana tetra MODERN SPECIES 13 XPA (ENSAMXG00000037903) saraf (ENSAMXG00000034259) xpa (ENSAMXG00000042548) ENSAMXG00000041170 mttp (ENSAMXG00000034773) ENSAMXG00000039444 B4GALT1 (ENSAMXG00000034558) ENSAMXG00000039976 ENSAMXG00000036430 slc24a2 (ENSAMXG00000011114) tspan5b (ENSAMXG00000011119) fip1l1b (ENSAMXG00000011126) chic2 (ENSAMXG00000011139) ENSAMXG00000041153 slc34a2a (ENSAMXG00000011149) ##18 rbpja (ENSAMXG00000011180) #22 ENSAMXG00000035165 #25 ENSAMXG00000042886 ITLN1 (ENSAMXG00000033698) ITLN1 (ENSAMXG00000003528) ENSAMXG00000040338 ENSAMXG00000003407 HGSNAT (ENSAMXG00000003340) pi4k2b (ENSAMXG00000003313) #12 SCLT1 (ENSAMXG00000003146) zgc:77739 (ENSAMXG00000029818) ENSAMXG00000035052 ENSAMXG00000044056 ENSAMXG00000033095 ENSAMXG00000033921 pcdh10a (ENSAMXG00000015613) Cyprinoidei ANCESTRAL SPECIES 55 ENSGT00390000006284 ENSGT00940000158277.b ENSGT00940000156295.g ENSGT00940000155249.g ENSGT00940000154953.b ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT01030000234940 ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e ENSGT00940000155857.e ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000163467.a.b.b.b.a.b ENSGT00400000023727 ENSGT00940000165832 ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00950000183061.a.a.a.a.a.a.b ENSGT00940000157146.a.b ENSGT00390000012030.b.b ENSGT00940000158380.b ENSGT00950000183079.A.b.c.a.a ENSGT00950000183012.B.b ENSGT00940000155777.b ENSGT00950000183026.A.a.a.b ENSGT00390000006641 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 34 ENSGT00940000155249.g.b ENSGT00940000154953.b.f ENSGT00390000014876.d ENSGT00940000155279.C.a.b.y ENSGT00940000159769.a.b.a ENSGT01030000234940.d ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.b ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e.a ENSGT00940000157037.a.c.b ENSGT00940000162578.sc.a.a ENSGT00390000003601.b.c.b ENSGT00530000063690.a.a.s.b ENSGT00950000183177.a.b.b.a ##18 ENSGT00390000005197.a.bb.a.a #22 ENSGT00390000000214.a.b.l.a #25 ENSGT00940000163467.a.b.b.b.a.b.b.b ENSGT00400000023727.f ENSGT00940000165832.b ENSGT00390000001491.a.b ENSGT00390000010434.a.b #12 ENSGT00950000183061.a.a.a.a.a.a.b.l ENSGT00940000157146.a.b.g.a ENSGT00390000012030.b.b.o ENSGT00940000158380.b.a ENSGT00950000183079.A.b.c.a.a.b ENSGT00950000183012.B.b.q ENSGT00940000155777.b.b ENSGT00950000183026.A.a.a.b.a ENSGT00390000006641.e Goldfish MODERN SPECIES 18 DHRSX (ENSCARG00000067422) ENSCARG00000067434 cd99 (ENSCARG00000067439) gyg2 (ENSCARG00000067457) MXRA5 (ENSCARG00000067477) PRKX (ENSCARG00000067496) nlgn4xa (ENSCARG00000067524) pudp (ENSCARG00000067609) ppp2r2ca (ENSCARG00000067647) WFS1 (ENSCARG00000014459) crmp1 (ENSCARG00000014497) fip1l1b (ENSCARG00000014818) chic2 (ENSCARG00000014847) ENSCARG00000014865 slc34a2a (ENSCARG00000014876) ##18 rbpja (ENSCARG00000014901) #22 ENSCARG00000014973 #25 ENSCARG00000015145 ENSCARG00000015166 ENSCARG00000015174 ENSCARG00000015183 ENSCARG00000015203 ENSCARG00000015207 camk2d2 (ENSCARG00000015249) ENSCARG00000015579 hpf1 (ENSCARG00000019815) elf2b (ENSCARG00000019847) NOCT (ENSCARG00000019873) ENSCARG00000019890 pcdh18a (ENSCARG00000019894) pcdh10a (ENSCARG00000019909) Cyprininae_a ANCESTRAL SPECIES 49 ENSGT00940000154953.b.f ENSGT00390000014876.d ENSGT00940000155279.C.a.b.y ENSGT00940000159769.b ENSGT00940000159769.a.b.a ENSGT01030000234940.d ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.b ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e.a ENSGT00940000157037.a.c.b ENSGT00940000162578.sc.a.a ENSGT00390000003601.b.c.b ENSGT00530000063690.a.a.s.b ENSGT00950000183177.a.b.b.a ##18 ENSGT00390000005197.a.bb.a.a #22 ENSGT00390000000214.a.b.l.a #25 ENSGT00940000163467.a.b.b.b.a.b.b.b ENSGT00400000023727.f.a ENSGT00940000165832.b ENSGT00390000001491.a.b ENSGT00390000010434.a.b #12 ENSGT00950000183061.a.a.a.a.a.a.b.l ENSGT00940000157146.a.b.g.a ENSGT00390000012030.b.b.o ENSGT00940000158380.b.a ENSGT00950000183079.A.b.c.a.a.b ENSGT00950000183012.B.b.q ENSGT00940000155777.b.b ENSGT00950000183026.A.a.a.b.a ENSGT00390000006641.e Common carp reference MODERN SPECIES 27 NOCT (ENSCCRG00000075894) elf2b (ENSCCRG00000014216) hpf1 (ENSCCRG00000014208) ENSCCRG00000003798 camk2d2 (ENSCCRG00000060910) ENSCCRG00000028861 ENSCCRG00000041832 ppp2r2ca (ENSCCRG00000074721) WFS1 (ENSCCRG00000042271) crmp1 (ENSCCRG00000004057) ENSCCRG00000058830 fip1l1b (ENSCCRG00000058893) chic2 (ENSCCRG00000013261) ENSCCRG00000067877 slc34a2a (ENSCCRG00000013167) ##18 rbpja (ENSCCRG00000061797) #22 ENSCCRG00000013123 #25 ENSCCRG00000055036 ENSCCRG00000066133 ENSCCRG00000059596 ENSCCRG00000031623 pi4k2b (ENSCCRG00000023875) #12 DLC1 (ENSCCRG00000035479) SGCZ (ENSCCRG00000043806) tusc3 (ENSCCRG00000068963) ENSCCRG00000059838 fgf20a (ENSCCRG00000015347) MICU3 (ENSCCRG00000008535) vps37a (ENSCCRG00000045372) mtmr7b (ENSCCRG00000045414) ENSCCRG00000014329 Golden-line barbel MODERN SPECIES 24 NOCT (ENSSGRG00000000085) elf2b (ENSSGRG00000000075) hpf1 (ENSSGRG00000053975) ENSSGRG00000052545 ENSSGRG00000052268 ENSSGRG00000052245 ENSSGRG00000052243 ppp2r2ca (ENSSGRG00000052240) WFS1 (ENSSGRG00000052237) crmp1 (ENSSGRG00000051777) ENSSGRG00000051762 ENSSGRG00000051759 ENSSGRG00000051758 ENSSGRG00000051756 slc34a2a (ENSSGRG00000051753) ##18 rbpja (ENSSGRG00000051752) #22 ENSSGRG00000051702 #25 ENSSGRG00000051697 ENSSGRG00000051696 nlgn1 (ENSSGRG00000051692) ENSSGRG00000051690 ENSSGRG00000051689 ect2 (ENSSGRG00000051452) b3gnt5a (ENSSGRG00000051440) ENSSGRG00000051439 SLC4A10 (ENSSGRG00000051226) TBR1 (ENSSGRG00000051220) psmd14 (ENSSGRG00000051129) RBMS1 (ENSSGRG00000050837) ITGB6 (ENSSGRG00000050832) PLA2R1 (ENSSGRG00000050828) Cyprininae ANCESTRAL SPECIES 253 ENSGT00940000158277.b.d ENSGT00940000156295.g.a ENSGT00940000155249.g.a ENSGT00940000154953.b.e ENSGT00390000014876.c ENSGT00940000155279.C.a.b.z ENSGT00940000159769.a.b.b ENSGT01030000234940.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.a ENSGT01030000234527.A.a.b.b.b.e.b ENSGT00940000155857.e ENSGT00940000162578.sc.a.b ENSGT00390000003601.b.c.a ENSGT00530000063690.a.a.s.a ENSGT00950000183177.a.b.b.b ##18 ENSGT00390000005197.a.bb.a.b #22 ENSGT00390000000214.a.b.l.b #25 ENSGT00940000163467.a.b.b.b.a.b.b.a ENSGT00940000163467.a.b.b.b.a.b.a ENSGT00400000023727.e.b.a ENSGT00940000165832.a ENSGT00390000001491.a.a ENSGT00390000010434.a.a #12 ENSGT00950000183061.a.a.a.a.a.a.b.k ENSGT00940000173544 ENSGT00940000157146.a.b.g.b ENSGT00390000012030.b.b.p ENSGT00940000158380.b.b ENSGT00950000183079.A.b.c.a.a.a ENSGT00950000183012.B.b.r ENSGT00940000155777.b.a Cyprininae_a ANCESTRAL SPECIES 82 ENSGT00940000156295.g.a ENSGT00940000155249.g.a ENSGT00940000154953.b.e ENSGT00390000014876.c ENSGT00940000155279.C.a.b.z ENSGT00940000159769.a.b.b ENSGT01030000234940.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e.a ENSGT01030000234527.A.a.b.b.b.e.b ENSGT00940000155857.e ENSGT00940000162578.sc.a.b ENSGT00390000003601.b.c.a ENSGT00530000063690.a.a.s.a ENSGT00530000063690.a.a.t.d ENSGT00950000183177.a.b.b.b ##18 ENSGT00390000005197.a.bb.a.b #22 ENSGT00390000000214.a.b.l.b #25 ENSGT00940000163467.a.b.b.b.a.b.b.a ENSGT00940000163467.a.b.b.b.a.b.a ENSGT00400000023727.e.b.b ENSGT00400000023727.f.b ENSGT00940000165832.a ENSGT00390000001491.a.a ENSGT00390000010434.a.a #12 ENSGT00950000183061.a.a.a.a.a.a.b.k ENSGT00940000173544 ENSGT00940000157146.a.b.g.b ENSGT00390000012030.b.b.p ENSGT00940000158380.b.b ENSGT00950000183079.A.b.c.a.a.a ENSGT00950000183012.B.b.r Golden-line barbel MODERN SPECIES 850 NOCT (ENSSGRG00000007242) elf2b (ENSSGRG00000007273) hpf1 (ENSSGRG00000007374) ENSSGRG00000007456 ENSSGRG00000008913 ENSSGRG00000015221 ppp2r2ca (ENSSGRG00000015230) crmp1 (ENSSGRG00000015243) ENSSGRG00000015628 ENSSGRG00000015629 ENSSGRG00000015630 fip1l1b (ENSSGRG00000015631) chic2 (ENSSGRG00000015632) ENSSGRG00000015633 slc34a2a (ENSSGRG00000015656) ##18 rbpja (ENSSGRG00000016090) #22 STIM2 (ENSSGRG00000016094) #25 ENSSGRG00000016098 ENSSGRG00000016099 ENSSGRG00000016100 ENSSGRG00000016101 ENSSGRG00000016102 ENSSGRG00000016103 ENSSGRG00000016104 Common carp reference MODERN SPECIES 22 ENSCCRG00000077743 ENSCCRG00000055755 ENSCCRG00000076789 NOCT (ENSCCRG00000021359) elf2b (ENSCCRG00000050791) hpf1 (ENSCCRG00000028101) ENSCCRG00000000778 camk2d2 (ENSCCRG00000003954) ENSCCRG00000061473 ENSCCRG00000074410 crmp1 (ENSCCRG00000000129) ENSCCRG00000069086 fip1l1b (ENSCCRG00000067945) ENSCCRG00000013089 ENSCCRG00000064023 rbpja (ENSCCRG00000013076) #22 ENSCCRG00000028945 #25 ENSCCRG00000061662 ENSCCRG00000013117 ENSCCRG00000045846 ENSCCRG00000045848 ENSCCRG00000013272 ENSCCRG00000001264 ENSCCRG00000082640 ENSCCRG00000068719 ENSCCRG00000079439 ENSCCRG00000068526 ENSCCRG00000038468 ENSCCRG00000079812 pi4k2b (ENSCCRG00000052856) #12 DLC1 (ENSCCRG00000054966) Goldfish MODERN SPECIES ENSCARG00000002736 pcdh10a (ENSCARG00000002747) pcdh18a (ENSCARG00000002770) NOCT (ENSCARG00000002779) elf2b (ENSCARG00000002791) hpf1 (ENSCARG00000002807) ENSCARG00000002912 camk2d2 (ENSCARG00000004077) ENSCARG00000005372 ppp2r2ca (ENSCARG00000005389) crmp1 (ENSCARG00000005408) ENSCARG00000005486 fip1l1b (ENSCARG00000005492) CHIC2 (ENSCARG00000005507) ENSCARG00000005516 rbpja (ENSCARG00000005524) #22 STIM2 (ENSCARG00000005542) #25 ENSCARG00000005554 ENSCARG00000005560 ENSCARG00000005566 ENSCARG00000005570 ENSCARG00000005578 ENSCARG00000005585 ENSCARG00000005594 HGSNAT (ENSCARG00000005601) pi4k2b (ENSCARG00000005920) #12 DLC1 (ENSCARG00000006600) SGCZ (ENSCARG00000008236) tusc3 (ENSCARG00000008273) fgf20a (ENSCARG00000008334) vps37a (ENSCARG00000008352) Zebrafish MODERN SPECIES NOCT (ENSDARG00000078525) elf2b (ENSDARG00000079626) hpf1 (ENSDARG00000057114) ENSDARG00000009026 camk2d2 (ENSDARG00000014273) ENSDARG00000104795 ENSDARG00000056806 ppp2r2ca (ENSDARG00000056797) WFS1 (ENSDARG00000062341) crmp1 (ENSDARG00000056742) DRD5 (ENSDARG00000037576) fip1l1b (ENSDARG00000070431) chic2 (ENSDARG00000022690) ENSDARG00000056677 slc34a2a (ENSDARG00000012903) ##18 rbpja (ENSDARG00000003398) #22 ENSDARG00000074867 #25 ENSDARG00000109597 ENSDARG00000110922 ENSDARG00000039063 ENSDARG00000113383 ENSDARG00000078898 itln1 (ENSDARG00000007534) HGSNAT (ENSDARG00000077804) pi4k2b (ENSDARG00000013881) #12 DLC1 (ENSDARG00000079317) SGCZ (ENSDARG00000106258) tusc3 (ENSDARG00000078854) fgf20a (ENSDARG00000007356) MICU3 (ENSDARG00000078599) vps37a (ENSDARG00000017119) Clupeiformes DUPLICATION Clupeiformes ANCESTRAL SPECIES 314 ENSGT00940000163587.a.b.b.e.a.d ENSGT00950000183153.c.a.q ENSGT00390000004049 ENSGT00940000166995 ENSGT01040000240503.B ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.a.c #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 Atlantic herring MODERN SPECIES 9 actl6b (ENSCHAG00000019451) ENSCHAG00000019526 ENSCHAG00000019577 psmb6 (ENSCHAG00000019579) trappc1 (ENSCHAG00000019601) ENSCHAG00000019645 ENSCHAG00000020711 slc25a11 (ENSCHAG00000020713) GCNT3 (ENSCHAG00000000456) GCNT3 (ENSCHAG00000000482) GCNT3 (ENSCHAG00000000517) gabarapb (ENSCHAG00000000564) CTDNEP1 (ENSCHAG00000000656) MAN2B2 (ENSCHAG00000000975) smim20 (ENSCHAG00000001433) #20 RBPJ (ENSCHAG00000001502) #22 CCKAR (ENSCHAG00000001739) #23 tbc1d19 (ENSCHAG00000001760) #24 STIM2 (ENSCHAG00000002167) #25 ENSCHAG00000003488 PCDH7 (ENSCHAG00000003521) #28 ENSCHAG00000003552 ENSCHAG00000004046 ENSCHAG00000004098 ENSCHAG00000004122 fam113 (ENSCHAG00000004145) cskmt (ENSCHAG00000004244) otub1b (ENSCHAG00000004283) med11 (ENSCHAG00000004839) arrb2b (ENSCHAG00000004997) hmgb3a (ENSCHAG00000007920) Denticle herring MODERN SPECIES ENSDCDG00000004611 ENSDCDG00000004614 ENSDCDG00000004618 zgc:92664 (ENSDCDG00000004620) ache (ENSDCDG00000004625) ENSDCDG00000004627 NAT16 (ENSDCDG00000004631) nat16l (ENSDCDG00000004633) ENSDCDG00000004635 ap1s1 (ENSDCDG00000004640) serpine1 (ENSDCDG00000004683) smim20 (ENSDCDG00000004732) #20 ENSDCDG00000004734 ENSDCDG00000004737 ENSDCDG00000004739 RBPJ (ENSDCDG00000004747) #22 CCKAR (ENSDCDG00000004766) #23 tbc1d19 (ENSDCDG00000004801) #24 STIM2 (ENSDCDG00000005046) #25 ENSDCDG00000005144 PCDH7 (ENSDCDG00000005151) #28 ENSDCDG00000005172 ENSDCDG00000005470 ENSDCDG00000005472 ENSDCDG00000013821 DTHD1 (ENSDCDG00000013827) NWD2 (ENSDCDG00000013836) ENSDCDG00000013845 zgc:194930 (ENSDCDG00000013851) rell1 (ENSDCDG00000013858) dvl2 (ENSDCDG00000013898) Clupeiformes ANCESTRAL SPECIES 22 ENSGT00940000157807.g.b ENSGT00940000162502.a ENSGT00940000154810 ENSGT00940000154259.b.b.c ENSGT00940000155279.C.a.b ENSGT00390000014876 ENSGT00940000155475.g ENSGT00950000182864.a.b.b.a.b.a.a.a.b.e ENSGT00390000016928.c ENSGT01030000234527.A.a.b.b.b.e ENSGT00940000155857.e ENSGT00940000163443.m.b ENSGT00390000003601.b ENSGT00530000063690.a.a ENSGT00950000183177.a.b.b ##18 ENSGT00390000005197.a.bb.a.d #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00390000001491.a ENSGT00390000010434.a #12 ENSGT00940000159570.a ENSGT00950000183001.b.b.a ENSGT00940000156391.d ENSGT00940000165038.a ENSGT00940000162580.b.b ENSGT00940000161707.a.a ENSGT00390000004855 ENSGT00390000015386.a ENSGT00940000164407.a.a ENSGT00390000015863 ENSGT00940000160151 Atlantic herring MODERN SPECIES 14 ENSCHAG00000022728 ENSCHAG00000022769 camk2d2 (ENSCHAG00000022862) ANK2 (ENSCHAG00000024230) hpf1 (ENSCHAG00000026715) ENSCHAG00000026718 ppp2r2ca (ENSCHAG00000026727) WFS1 (ENSCHAG00000026739) crmp1 (ENSCHAG00000026792) ENSCHAG00000027321 ENSCHAG00000027325 fip1l1b (ENSCHAG00000027328) chic2 (ENSCHAG00000027334) ENSCHAG00000027339 slc34a2a (ENSCHAG00000027347) ##18 rbpja (ENSCHAG00000027398) #22 STIM2 (ENSCHAG00000027421) #25 cryz (ENSCHAG00000000541) ENSCHAG00000000711 selenoj (ENSCHAG00000000792) sh3glb1b (ENSCHAG00000000980) pgm2 (ENSCHAG00000001487) TBC1D1 (ENSCHAG00000005502) ENSCHAG00000006023 ENSCHAG00000006031 fam114a1 (ENSCHAG00000006058) klhl5 (ENSCHAG00000006337) WDR19 (ENSCHAG00000006411) ENSCHAG00000008311 ENSCHAG00000008347 ENSCHAG00000008363 Denticle herring MODERN SPECIES 14 ptgr1.1 (ENSDCDG00000025466) zgc:56493 (ENSDCDG00000025458) ENSDCDG00000025453 ENSDCDG00000025448 camk2d2 (ENSDCDG00000018215) ANK2 (ENSDCDG00000001137) hpf1 (ENSDCDG00000000208) ENSDCDG00000030369 ppp2r2ca (ENSDCDG00000030366) WFS1 (ENSDCDG00000030362) crmp1 (ENSDCDG00000029099) fip1l1b (ENSDCDG00000029051) chic2 (ENSDCDG00000029045) ENSDCDG00000029043 slc34a2a (ENSDCDG00000028976) ##18 rbpja (ENSDCDG00000028970) #22 ENSDCDG00000028226 #25 ENSDCDG00000028201 HGSNAT (ENSDCDG00000028196) pi4k2b (ENSDCDG00000028190) #12 ENSDCDG00000028188 adra2c (ENSDCDG00000028185) CPZ (ENSDCDG00000028117) CPZ (ENSDCDG00000027994) hmx4 (ENSDCDG00000027983) ENSDCDG00000027980 adra2c (ENSDCDG00000027977) lrpap1 (ENSDCDG00000027965) DOK7 (ENSDCDG00000027960) rgs12b (ENSDCDG00000027950) htt (ENSDCDG00000024621) Euteleosteomorpha ANCESTRAL SPECIES 103 ENSGT01060000248860 ENSGT00940000157580.a.b ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT01030000236196 ENSGT00940000155527.j.b ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Protacanthopterygii ANCESTRAL SPECIES 159 ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00980000201267 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000157037.a.c.b ENSGT00940000164532.b ENSGT00940000164532.a ENSGT00940000156228.p ENSGT00940000167973 Northern pike DUPLICATION Northern pike MODERN SPECIES 24 kdm4c (ENSELUG00000010046) ENSELUG00000001468 ENSELUG00000027629 ENSELUG00000026828 TYRP1 (ENSELUG00000010406) ENSELUG00000010446 ADGRL3 (ENSELUG00000010500) ENSELUG00000031260 DCTN6 (ENSELUG00000010524) gtf2e2 (ENSELUG00000010556) smim18 (ENSELUG00000010534) ENSELUG00000010588 ENSELUG00000028012 rbpja (ENSELUG00000034120) #22 ENSELUG00000026247 rbpja (ENSELUG00000010624) #22 STIM2 (ENSELUG00000010815) #25 ENSELUG00000027435 ENSELUG00000010919 ENSELUG00000010945 ENSELUG00000010981 ENSELUG00000028614 RNF38 (ENSELUG00000032719) CRIP2 (ENSELUG00000026773) CI105 (ENSELUG00000011089) ENSELUG00000000391 ENSELUG00000011127 ENSELUG00000011134 ENSELUG00000011185 ENSELUG00000011159 ENSELUG00000011192 Northern pike MODERN SPECIES 24 smc2 (ENSELUG00000009845) ecpas (ENSELUG00000009962) kdm4c (ENSELUG00000010046) ENSELUG00000001468 ENSELUG00000027629 ENSELUG00000026828 TYRP1 (ENSELUG00000010406) ENSELUG00000010446 ADGRL3 (ENSELUG00000010500) ENSELUG00000031260 DCTN6 (ENSELUG00000010524) gtf2e2 (ENSELUG00000010556) smim18 (ENSELUG00000010534) ENSELUG00000010588 ENSELUG00000028012 rbpja (ENSELUG00000034120) #22 ENSELUG00000026247 rbpja (ENSELUG00000010624) #22 STIM2 (ENSELUG00000010815) #25 ENSELUG00000027435 ENSELUG00000010919 ENSELUG00000010945 ENSELUG00000010981 ENSELUG00000028614 RNF38 (ENSELUG00000032719) CRIP2 (ENSELUG00000026773) CI105 (ENSELUG00000011089) ENSELUG00000000391 ENSELUG00000011127 ENSELUG00000011134 ENSELUG00000011185 Salmoninae ANCESTRAL SPECIES 1628 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l.d #25 Salmoninae_a ANCESTRAL SPECIES 609 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l.d.b #25 Salmo ANCESTRAL SPECIES 273 ENSGT00940000155527.j.b.d.a ENSGT00390000017890.b.a ENSGT00410000029064.a ENSGT00390000011749 ENSGT00410000029064.b ENSGT00390000001491.a.i ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l.d.a #25 Atlantic salmon MODERN SPECIES 640 ENSSSAG00000107806 ENSSSAG00000065203 SMIM18 (ENSSSAG00000120419) gtf2e2 (ENSSSAG00000040128) ENSSSAG00000035612 ENSSSAG00000112233 #22 ENSSSAG00000004256 #25 Oncorhynchus ANCESTRAL SPECIES 506 ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l.d.b #25 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ENSOMYG00000073461 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 #22 ENSOMYG00000069257 #25 ENSOMYG00000035779 ENSOMYG00000039760 ENSOMYG00000059560 Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00390000018004 Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 ENSGT00940000158826 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000155279.C.a.a ENSGT00940000155150.a ENSGT00940000159769.a.b ENSGT00940000160757 Ovalentaria ANCESTRAL SPECIES ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a ENSGT00940000155279.C.a.a ENSGT00940000155150.a ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Oryzias ANCESTRAL SPECIES 15 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Oryzias_b ANCESTRAL SPECIES 29 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Javanese ricefish MODERN SPECIES chic2 (ENSOJAG00000017109) fip1l1b (ENSOJAG00000017102) kitb (ENSOJAG00000016645) clockb (ENSOJAG00000016253) exoc1l (ENSOJAG00000016206) smc2 (ENSOJAG00000015443) kdm4c (ENSOJAG00000013891) ENSOJAG00000008199 TYRP1 (ENSOJAG00000007953) ENSOJAG00000007820 ADGRL3 (ENSOJAG00000004774) smim18 (ENSOJAG00000004223) gtf2e2 (ENSOJAG00000004072) DCTN6 (ENSOJAG00000003897) HGSNAT (ENSOJAG00000003456) rbpja (ENSOJAG00000003267) #22 STIM2 (ENSOJAG00000003027) #25 ENSOJAG00000002956 ENSOJAG00000002948 crmp1 (ENSOJAG00000002315) WFS1 (ENSOJAG00000002110) ppp2r2ca (ENSOJAG00000002089) ENSOJAG00000002069 hpf1 (ENSOJAG00000002044) ENSOJAG00000001074 camk2d2 (ENSOJAG00000000420) CXCL8 (ENSOJAG00000000132) ENSOJAG00000000078 FBXO10 (ENSOJAG00000013714) polr1e (ENSOJAG00000013699) ZBTB5 (ENSOJAG00000013690) Indian medaka MODERN SPECIES 21 kitb (ENSOMEG00000015661) clockb (ENSOMEG00000015412) exoc1l (ENSOMEG00000000377) smc2 (ENSOMEG00000014982) ecpas (ENSOMEG00000014908) ENSOMEG00000001027 ENSOMEG00000014791 ENSOMEG00000014764 TYRP1 (ENSOMEG00000014715) ENSOMEG00000014698 ADGRL3 (ENSOMEG00000014640) gtf2e2 (ENSOMEG00000014610) smim18 (ENSOMEG00000014593) DCTN6 (ENSOMEG00000014586) ENSOMEG00000014565 rbpja (ENSOMEG00000014525) #22 ENSOMEG00000014488 #25 ENSOMEG00000014461 crmp1 (ENSOMEG00000014427) WFS1 (ENSOMEG00000014371) ppp2r2ca (ENSOMEG00000014344) ENSOMEG00000014313 hpf1 (ENSOMEG00000014263) ENSOMEG00000014166 ENSOMEG00000014138 ENSOMEG00000014101 ENSOMEG00000014053 camk2d2 (ENSOMEG00000014019) ENSOMEG00000013850 ENSOMEG00000013730 FBXO10 (ENSOMEG00000013304) Oryzias_a ANCESTRAL SPECIES 23 ENSGT00940000162578 ENSGT00940000155626 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000162559 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Chinese medaka MODERN SPECIES 272 chic2 (ENSOSIG00000021464) fip1l1b (ENSOSIG00000021461) kitb (ENSOSIG00000021456) clockb (ENSOSIG00000021261) exoc1l (ENSOSIG00000021194) smc2 (ENSOSIG00000021184) ENSOSIG00000021167 ENSOSIG00000001740 TYRP1 (ENSOSIG00000000687) ENSOSIG00000000668 ENSOSIG00000000656 smim18 (ENSOSIG00000000650) gtf2e2 (ENSOSIG00000000648) DCTN6 (ENSOSIG00000000644) ENSOSIG00000000637 rbpja (ENSOSIG00000000585) #22 STIM2 (ENSOSIG00000000579) #25 Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.a.l ENSGT00940000155279.C.a.b.e.a ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.a.l ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b Poecilia ANCESTRAL SPECIES 6 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 NAME_6 ANCESTRAL SPECIES 47 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Sailfin molly MODERN SPECIES 533 ADGRL3 (ENSPLAG00000021073) ENSPLAG00000021021 gtf2e2 (ENSPLAG00000021007) smim18 (ENSPLAG00000020984) ENSPLAG00000020962 ENSPLAG00000020920 rbpja (ENSPLAG00000020897) #22 STIM2 (ENSPLAG00000020878) #25 Amazon molly MODERN SPECIES 295 fip1l1b (ENSPFOG00000014745) kitb (ENSPFOG00000014822) clockb (ENSPFOG00000015083) exoc1l (ENSPFOG00000015164) smc2 (ENSPFOG00000015169) ecpas (ENSPFOG00000015283) ENSPFOG00000015484 ENSPFOG00000015661 TYRP1 (ENSPFOG00000016088) ENSPFOG00000016179 ADGRL3 (ENSPFOG00000016241) gtf2e2 (ENSPFOG00000016382) smim18 (ENSPFOG00000020146) ENSPFOG00000016433 ENSPFOG00000016453 rbpja (ENSPFOG00000016494) #22 STIM2 (ENSPFOG00000016556) #25 ENSPFOG00000024524 ENSPFOG00000016592 ENSPFOG00000016595 crmp1 (ENSPFOG00000016623) WFS1 (ENSPFOG00000016702) ppp2r2ca (ENSPFOG00000016742) ENSPFOG00000016766 hpf1 (ENSPFOG00000016797) ANK2 (ENSPFOG00000016848) camk2d2 (ENSPFOG00000017035) ENSPFOG00000017033 Guppy MODERN SPECIES 439 fip1l1b (ENSPREG00000012535) kitb (ENSPREG00000012489) CLOCK (ENSPREG00000011939) exoc1l (ENSPREG00000011864) smc2 (ENSPREG00000011769) ecpas (ENSPREG00000011321) ENSPREG00000011230 ENSPREG00000011036 TYRP1 (ENSPREG00000010917) ENSPREG00000010850 ADGRL3 (ENSPREG00000010586) smim18 (ENSPREG00000010507) gtf2e2 (ENSPREG00000010486) DCTN6 (ENSPREG00000010472) ENSPREG00000010444 rbpja (ENSPREG00000010297) #22 STIM2 (ENSPREG00000010192) #25 ENSPREG00000010148 ENSPREG00000010138 ENSPREG00000010129 crmp1 (ENSPREG00000010103) WFS1 (ENSPREG00000010077) ppp2r2ca (ENSPREG00000010056) hpf1 (ENSPREG00000010038) ANK2 (ENSPREG00000009960) camk2d2 (ENSPREG00000009806) ENSPREG00000009575 ENSPREG00000009499 FBXO10 (ENSPREG00000009485) polr1e (ENSPREG00000009470) ENSPREG00000009458 Platyfish MODERN SPECIES 19 clockb (ENSXMAG00000028575) exoc1l (ENSXMAG00000022359) smc2 (ENSXMAG00000004544) ENSXMAG00000027231 ENSXMAG00000026276 kdm4c (ENSXMAG00000023645) ENSXMAG00000011984 TYRP1 (ENSXMAG00000012045) ENSXMAG00000012077 ADGRL3 (ENSXMAG00000012102) ENSXMAG00000021800 gtf2e2 (ENSXMAG00000012141) smim18 (ENSXMAG00000019693) ENSXMAG00000023015 ENSXMAG00000012177 rbpja (ENSXMAG00000012207) #22 STIM2 (ENSXMAG00000012254) #25 ENSXMAG00000026434 ENSXMAG00000012258 crmp1 (ENSXMAG00000012278) WFS1 (ENSXMAG00000012351) ppp2r2ca (ENSXMAG00000012375) ENSXMAG00000013671 hpf1 (ENSXMAG00000012400) ENSXMAG00000012408 ENSXMAG00000021771 ENSXMAG00000028088 camk2d2 (ENSXMAG00000012446) ENSXMAG00000026893 ENSXMAG00000026664 FBXO10 (ENSXMAG00000012473) NAME_4 ANCESTRAL SPECIES 388 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b.i Sheepshead minnow MODERN SPECIES 985 gtf2e2 (ENSCVAG00000013488) smim18 (ENSCVAG00000013467) ENSCVAG00000013460 HGSNAT (ENSCVAG00000013431) rbpja (ENSCVAG00000013395) #22 STIM2 (ENSCVAG00000013338) #25 ENSCVAG00000013331 Mummichog MODERN SPECIES 992 smim18 (ENSFHEG00000015409) gtf2e2 (ENSFHEG00000015401) DCTN6 (ENSFHEG00000015367) ENSFHEG00000015358 rbpja (ENSFHEG00000015345) #22 STIM2 (ENSFHEG00000015262) #25 Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Mangrove rivulus MODERN SPECIES 86 kitb (ENSKMAG00000021945) clockb (ENSKMAG00000021952) exoc1l (ENSKMAG00000021957) smc2 (ENSKMAG00000021962) ecpas (ENSKMAG00000021979) ENSKMAG00000021994 ENSKMAG00000022021 TYRP1 (ENSKMAG00000000177) ENSKMAG00000000249 ENSKMAG00000000275 ADGRL3 (ENSKMAG00000000299) gtf2e2 (ENSKMAG00000000332) smim18 (ENSKMAG00000000378) DCTN6 (ENSKMAG00000000386) HGSNAT (ENSKMAG00000000428) rbpja (ENSKMAG00000000445) #22 ENSKMAG00000000490 #25 ENSKMAG00000000501 ENSKMAG00000000514 ENSKMAG00000000524 crmp1 (ENSKMAG00000000535) ENSKMAG00000000620 WFS1 (ENSKMAG00000000636) ppp2r2ca (ENSKMAG00000000648) Turquoise killifish MODERN SPECIES 1449 rbpja (ENSNFUG00015016395) #22 Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Pomacentridae ANCESTRAL SPECIES 8 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000177878 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000177601 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b Pomacentridae_A ANCESTRAL SPECIES ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Amphiprion ANCESTRAL SPECIES ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b ENSGT00940000159842.pc.a.a.b.b.b.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Orange clownfish MODERN SPECIES 17 clockb (ENSAPEG00000022094) exoc1l (ENSAPEG00000022070) smc2 (ENSAPEG00000021997) ecpas (ENSAPEG00000021886) kdm4c (ENSAPEG00000021825) ENSAPEG00000021741 TYRP1 (ENSAPEG00000021687) ENSAPEG00000021642 ENSAPEG00000021616 ADGRL3 (ENSAPEG00000021421) ENSAPEG00000021388 smim18 (ENSAPEG00000021366) gtf2e2 (ENSAPEG00000021340) DCTN6 (ENSAPEG00000021316) HGSNAT (ENSAPEG00000021302) rbpja (ENSAPEG00000021264) #22 ENSAPEG00000021067 #25 ENSAPEG00000021025 ENSAPEG00000020969 crmp1 (ENSAPEG00000020908) WFS1 (ENSAPEG00000020866) ppp2r2ca (ENSAPEG00000020822) ENSAPEG00000020790 hpf1 (ENSAPEG00000020760) ENSAPEG00000020724 ENSAPEG00000020656 camk2d2 (ENSAPEG00000020635) ENSAPEG00000020615 ENSAPEG00000020603 FBXO10 (ENSAPEG00000020593) polr1e (ENSAPEG00000020581) Clown anemonefish MODERN SPECIES 1451 ENSAOCG00000003549 TYRP1 (ENSAOCG00000003527) ENSAOCG00000003491 ADGRL3 (ENSAOCG00000003408) mibp2 (ENSAOCG00000003342) gtf2e2 (ENSAOCG00000000085) smim18 (ENSAOCG00000003332) DCTN6 (ENSAOCG00000003326) HGSNAT (ENSAOCG00000003320) rbpja (ENSAOCG00000003307) #22 ENSAOCG00000003287 #25 Spiny chromis MODERN SPECIES 363 ENSAPOG00000002897 TYRP1 (ENSAPOG00000002999) ENSAPOG00000003157 ENSAPOG00000003232 ADGRL3 (ENSAPOG00000003416) smim18 (ENSAPOG00000003456) gtf2e2 (ENSAPOG00000003480) DCTN6 (ENSAPOG00000003515) HGSNAT (ENSAPOG00000003539) rbpja (ENSAPOG00000003569) #22 STIM2 (ENSAPOG00000003635) #25 Bicolor damselfish MODERN SPECIES 299 clockb (ENSSPAG00000017640) exoc1l (ENSSPAG00000017743) smc2 (ENSSPAG00000017757) ENSSPAG00000017806 ecpas (ENSSPAG00000017833) ENSSPAG00000017961 ENSSPAG00000017995 ENSSPAG00000018086 TYRP1 (ENSSPAG00000018509) ENSSPAG00000018541 ADGRL3 (ENSSPAG00000018591) gtf2e2 (ENSSPAG00000018750) smim18 (ENSSPAG00000018779) DCTN6 (ENSSPAG00000018797) ENSSPAG00000018839 rbpja (ENSSPAG00000018868) #22 STIM2 (ENSSPAG00000018902) #25 ENSSPAG00000018914 ENSSPAG00000018928 crmp1 (ENSSPAG00000018953) WFS1 (ENSSPAG00000018975) ppp2r2ca (ENSSPAG00000018993) ENSSPAG00000019008 ENSSPAG00000019019 hpf1 (ENSSPAG00000019040) ENSSPAG00000019071 ENSSPAG00000019101 ENSSPAG00000019128 Cichlidae ANCESTRAL SPECIES 3 ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Haplochromini ANCESTRAL SPECIES 3 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Burton s mouthbrooder MODERN SPECIES 593 kitb (ENSHBUG00000014002) clockb (ENSHBUG00000014187) exoc1l (ENSHBUG00000014198) smc2 (ENSHBUG00000014284) ecpas (ENSHBUG00000014406) ENSHBUG00000014453 ENSHBUG00000014479 ENSHBUG00000000425 TYRP1 (ENSHBUG00000014613) ENSHBUG00000014642 ADGRL3 (ENSHBUG00000014840) smim18 (ENSHBUG00000014870) gtf2e2 (ENSHBUG00000014885) DCTN6 (ENSHBUG00000014920) HGSNAT (ENSHBUG00000014941) rbpja (ENSHBUG00000015000) #22 ENSHBUG00000015027 #25 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 P. nyererei MODERN SPECIES 482 kitb (ENSPNYG00000015929) clockb (ENSPNYG00000015652) exoc1l (ENSPNYG00000015577) smc2 (ENSPNYG00000015529) ecpas (ENSPNYG00000015414) kdm4c (ENSPNYG00000015367) ENSPNYG00000015301 TYRP1 (ENSPNYG00000015263) ENSPNYG00000015247 ADGRL3 (ENSPNYG00000015202) ENSPNYG00000015185 smim18 (ENSPNYG00000015178) gtf2e2 (ENSPNYG00000015163) DCTN6 (ENSPNYG00000015135) HGSNAT (ENSPNYG00000015105) rbpja (ENSPNYG00000015075) #22 STIM2 (ENSPNYG00000015047) #25 ENSPNYG00000015030 ENSPNYG00000015013 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000181745 ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.a.c ENSGT01100000263949.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Eastern happy MODERN SPECIES 18 clockb (ENSACLG00000010583) exoc1l (ENSACLG00000010957) smc2 (ENSACLG00000010966) ecpas (ENSACLG00000011055) ENSACLG00000011182 ENSACLG00000011213 ENSACLG00000011227 ENSACLG00000011719 TYRP1 (ENSACLG00000011752) ENSACLG00000011772 ADGRL3 (ENSACLG00000011861) gtf2e2 (ENSACLG00000011939) smim18 (ENSACLG00000011954) DCTN6 (ENSACLG00000011976) HGSNAT (ENSACLG00000012041) rbpja (ENSACLG00000012078) #22 STIM2 (ENSACLG00000012115) #25 ENSACLG00000012155 ENSACLG00000012186 ENSACLG00000012221 crmp1 (ENSACLG00000012241) WFS1 (ENSACLG00000012306) ppp2r2ca (ENSACLG00000012319) ENSACLG00000012374 hpf1 (ENSACLG00000012405) ENSACLG00000012468 camk2d2 (ENSACLG00000012862) ENSACLG00000013497 ENSACLG00000013625 FBXO10 (ENSACLG00000013644) ZBTB5 (ENSACLG00000013658) Zebra mbuna MODERN SPECIES 1109 clockb (ENSMZEG00005023826) exoc1l (ENSMZEG00005023825) smc2 (ENSMZEG00005023824) ecpas (ENSMZEG00005023823) ENSMZEG00005023822 ENSMZEG00005023821 ENSMZEG00005023820 ENSMZEG00005023819 TYRP1 (ENSMZEG00005023818) ENSMZEG00005023817 ADGRL3 (ENSMZEG00005023776) smim18 (ENSMZEG00005023754) gtf2e2 (ENSMZEG00005023750) DCTN6 (ENSMZEG00005023748) HGSNAT (ENSMZEG00005023744) rbpja (ENSMZEG00005023737) #22 STIM2 (ENSMZEG00005023732) #25 ENSMZEG00005023729 ENSMZEG00005023726 ENSMZEG00005023725 WDR19 (ENSMZEG00005023719) rfc1 (ENSMZEG00005023710) rpl9 (ENSMZEG00005023706) lias (ENSMZEG00005023703) ugdh (ENSMZEG00005023700) map9 (ENSMZEG00005023698) smim14 (ENSMZEG00005023696) UBE2K (ENSMZEG00005023693) pds5a (ENSMZEG00005023687) n4bp2 (ENSMZEG00005023686) rhoh (ENSMZEG00005023683) Lyretail cichlid MODERN SPECIES 301 ENSNBRG00000017814 ENSNBRG00000017792 CLOCK (ENSNBRG00000017733) exoc1l (ENSNBRG00000017710) smc2 (ENSNBRG00000017664) ecpas (ENSNBRG00000017570) kdm4c (ENSNBRG00000017522) ENSNBRG00000017456 TYRP1 (ENSNBRG00000017425) ENSNBRG00000017338 ADGRL3 (ENSNBRG00000017271) smim18 (ENSNBRG00000017249) gtf2e2 (ENSNBRG00000017242) DCTN6 (ENSNBRG00000017226) HGSNAT (ENSNBRG00000017214) rbpja (ENSNBRG00000017183) #22 STIM2 (ENSNBRG00000017167) #25 ENSNBRG00000017148 crmp1 (ENSNBRG00000017119) WFS1 (ENSNBRG00000017107) ppp2r2ca (ENSNBRG00000017086) ENSNBRG00000017070 hpf1 (ENSNBRG00000017051) ENSNBRG00000017029 ENSNBRG00000017003 ENSNBRG00000016961 camk2d2 (ENSNBRG00000016936) ENSNBRG00000016923 ENSNBRG00000016909 FBXO10 (ENSNBRG00000016842) polr1e (ENSNBRG00000016822) Nile tilapia MODERN SPECIES 18 fip1l1b (ENSONIG00000008785) kitb (ENSONIG00000008788) clockb (ENSONIG00000008797) exoc1l (ENSONIG00000008809) smc2 (ENSONIG00000008811) ecpas (ENSONIG00000008818) kdm4c (ENSONIG00000008824) ENSONIG00000008832 TYRP1 (ENSONIG00000008846) ENSONIG00000029433 ADGRL3 (ENSONIG00000008860) smim18 (ENSONIG00000043015) gtf2e2 (ENSONIG00000008865) DCTN6 (ENSONIG00000008868) HGSNAT (ENSONIG00000008872) rbpja (ENSONIG00000043047) #22 STIM2 (ENSONIG00000008875) #25 ENSONIG00000042062 ENSONIG00000037076 ENSONIG00000008880 crmp1 (ENSONIG00000008887) WFS1 (ENSONIG00000008897) ppp2r2ca (ENSONIG00000008902) ENSONIG00000008905 hpf1 (ENSONIG00000008911) ENSONIG00000008914 camk2d2 (ENSONIG00000008917) ENSONIG00000029754 ENSONIG00000040454 FBXO10 (ENSONIG00000008918) polr1e (ENSONIG00000008921) Midas cichlid MODERN SPECIES 274 ADGRL3 (ENSACIG00000014545) ENSACIG00000014529 smim18 (ENSACIG00000014520) gtf2e2 (ENSACIG00000014507) DCTN6 (ENSACIG00000014499) ENSACIG00000014471 rbpja (ENSACIG00000014433) #22 STIM2 (ENSACIG00000014212) #25 ENSACIG00000014185 ENSACIG00000014168 ENSACIG00000014159 ENSACIG00000014151 ENSACIG00000014138 ENSACIG00000014131 ENSACIG00000014115 crmp1 (ENSACIG00000012963) WFS1 (ENSACIG00000012828) ppp2r2ca (ENSACIG00000012807) ENSACIG00000012764 hpf1 (ENSACIG00000012747) ENSACIG00000012737 ENSACIG00000012702 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b Eupercaria ANCESTRAL SPECIES 2 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Ballan wrasse MODERN SPECIES 240 kitb (ENSLBEG00000028818) ENSLBEG00000028813 exoc1l (ENSLBEG00000028809) smc2 (ENSLBEG00000028807) ecpas (ENSLBEG00000028805) kdm4c (ENSLBEG00000028803) ENSLBEG00000028801 TYRP1 (ENSLBEG00000028800) ENSLBEG00000028798 ENSLBEG00000028797 ENSLBEG00000028794 smim18 (ENSLBEG00000028792) gtf2e2 (ENSLBEG00000028790) DCTN6 (ENSLBEG00000028789) ENSLBEG00000028788 rbpja (ENSLBEG00000028786) #22 STIM2 (ENSLBEG00000028785) #25 ENSLBEG00000028784 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000162559 ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000162559 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000162559 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a European seabass MODERN SPECIES 20 ENSDLAG00005012563 ENSDLAG00005012617 ENSDLAG00005013892 exoc1l (ENSDLAG00005014437) smc2 (ENSDLAG00005014443) ENSDLAG00005014517 ENSDLAG00005015624 ENSDLAG00005015926 ENSDLAG00005022973 ENSDLAG00005022999 ENSDLAG00005023107 ENSDLAG00005024835 SMIM18 (ENSDLAG00005024842) ENSDLAG00005030887 ENSDLAG00005024854 rbpja (ENSDLAG00005024887) #22 ENSDLAG00005024913 #25 ENSDLAG00005024916 crmp1 (ENSDLAG00005024927) WFS1 (ENSDLAG00005029500) ppp2r2ca (ENSDLAG00005031161) ENSDLAG00005025024 hpf1 (ENSDLAG00005025041) ENSDLAG00005025100 camk2d2 (ENSDLAG00005032299) ENSDLAG00005014206 FBXO10 (ENSDLAG00005025905) ENSDLAG00005025906 ZBTB5 (ENSDLAG00005033499) ENSDLAG00005025909 ENSDLAG00005025923 Large yellow croaker MODERN SPECIES 481 chic2 (ENSLCRG00005012496) kitb (ENSLCRG00005012510) clockb (ENSLCRG00005012516) exoc1l (ENSLCRG00005012561) smc2 (ENSLCRG00005012562) ecpas (ENSLCRG00005012572) kdm4c (ENSLCRG00005012860) ENSLCRG00005012949 TYRP1 (ENSLCRG00005014121) ENSLCRG00005014151 ADGRL3 (ENSLCRG00005014203) gtf2e2 (ENSLCRG00005017199) smim18 (ENSLCRG00005017201) ENSLCRG00005017204 ENSLCRG00005017247 rbpja (ENSLCRG00005017286) #22 STIM2 (ENSLCRG00005017288) #25 ENSLCRG00005017291 ENSLCRG00005017292 crmp1 (ENSLCRG00005017311) WFS1 (ENSLCRG00005020444) ppp2r2ca (ENSLCRG00005020446) ENSLCRG00005020451 hpf1 (ENSLCRG00005020456) ENSLCRG00005020483 camk2d2 (ENSLCRG00005022490) ENSLCRG00005022995 CXCL8 (ENSLCRG00005022997) polr1e (ENSLCRG00005022998) UBA6 (ENSLCRG00005023013) POLQ (ENSLCRG00005023449) Gilthead seabream MODERN SPECIES kitb (ENSSAUG00010025076) clockb (ENSSAUG00010025019) ENSSAUG00010025005 exoc1l (ENSSAUG00010025004) smc2 (ENSSAUG00010024993) ecpas (ENSSAUG00010024842) kdm4c (ENSSAUG00010024690) ENSSAUG00010023740 TYRP1 (ENSSAUG00010023675) ENSSAUG00010023668 ADGRL3 (ENSSAUG00010021014) smim18 (ENSSAUG00010020991) gtf2e2 (ENSSAUG00010020988) DCTN6 (ENSSAUG00010020983) ENSSAUG00010020981 rbpja (ENSSAUG00010020951) #22 STIM2 (ENSSAUG00010020885) #25 ENSSAUG00010020883 ENSSAUG00010020881 ENSSAUG00010020880 ENSSAUG00010020879 crmp1 (ENSSAUG00010020754) WFS1 (ENSSAUG00010020749) ppp2r2ca (ENSSAUG00010020748) ENSSAUG00010020746 hpf1 (ENSSAUG00010020745) ENSSAUG00010010856 camk2d2 (ENSSAUG00010006026) ENSSAUG00010005953 ENSSAUG00010005949 FBXO10 (ENSSAUG00010005945) Perciformes ANCESTRAL SPECIES 2 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Cottioidei ANCESTRAL SPECIES 3 ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00980000198676 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 ENSGT00940000158826 Lumpfish MODERN SPECIES ENSCLMG00005002613 ENSCLMG00005002611 clockb (ENSCLMG00005002021) exoc1l (ENSCLMG00005002002) smc2 (ENSCLMG00005001997) ecpas (ENSCLMG00005001275) kdm4c (ENSCLMG00005001264) ENSCLMG00005000943 TYRP1 (ENSCLMG00005000925) ENSCLMG00005000921 ADGRL3 (ENSCLMG00005000920) smim18 (ENSCLMG00005000919) gtf2e2 (ENSCLMG00005000918) DCTN6 (ENSCLMG00005000917) HGSNAT (ENSCLMG00005000902) rbpja (ENSCLMG00005000865) #22 ENSCLMG00005000859 #25 ENSCLMG00005000858 crmp1 (ENSCLMG00005000855) WFS1 (ENSCLMG00005000842) ppp2r2ca (ENSCLMG00005000837) hpf1 (ENSCLMG00005000835) ENSCLMG00005000823 ENSCLMG00005000820 camk2d2 (ENSCLMG00005000488) ENSCLMG00005000452 FBXO10 (ENSCLMG00005000443) polr1e (ENSCLMG00005000434) ZBTB5 (ENSCLMG00005000427) grhprb (ENSCLMG00005000421) UBA6 (ENSCLMG00005000338) Stickleback MODERN SPECIES 4 fip1l1b (ENSGACG00000015946) kitb (ENSGACG00000015944) clockb (ENSGACG00000015939) smc2 (ENSGACG00000015927) ecpas (ENSGACG00000015925) kdm4c (ENSGACG00000015922) ENSGACG00000015921 TYRP1 (ENSGACG00000015912) ENSGACG00000015905 ENSGACG00000015904 ENSGACG00000015901 smim18 (ENSGACG00000015899) gtf2e2 (ENSGACG00000015893) DCTN6 (ENSGACG00000015891) HGSNAT (ENSGACG00000015890) rbpja (ENSGACG00000015888) #22 Perciformes_a ANCESTRAL SPECIES ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Pike perch MODERN SPECIES 69 exoc1l (ENSSLUG00000010916) smc2 (ENSSLUG00000010884) ecpas (ENSSLUG00000008642) kdm4c (ENSSLUG00000008356) ENSSLUG00000025842 TYRP1 (ENSSLUG00000025429) hnrnpd (ENSSLUG00000025425) ENSSLUG00000025422 ENSSLUG00000025416 ENSSLUG00000025413 ENSSLUG00000025412 smim18 (ENSSLUG00000025410) gtf2e2 (ENSSLUG00000025406) DCTN6 (ENSSLUG00000025399) HGSNAT (ENSSLUG00000025391) rbpja (ENSSLUG00000025378) #22 STIM2 (ENSSLUG00000025345) #25 ENSSLUG00000025328 crmp1 (ENSSLUG00000025211) WFS1 (ENSSLUG00000025185) ppp2r2ca (ENSSLUG00000025184) ENSSLUG00000025180 hpf1 (ENSSLUG00000025177) ENSSLUG00000025165 ENSSLUG00000025157 ENSSLUG00000025153 camk2d2 (ENSSLUG00000024418) ENSSLUG00000024221 ENSSLUG00000024216 FBXO10 (ENSSLUG00000024214) polr1e (ENSSLUG00000024209) Channel bull blenny MODERN SPECIES kitb (ENSCGOG00000017978) clockb (ENSCGOG00000017276) exoc1l (ENSCGOG00000017250) ENSCGOG00000017249 smc2 (ENSCGOG00000016701) ecpas (ENSCGOG00000016277) ENSCGOG00000016252 ENSCGOG00000003397 TYRP1 (ENSCGOG00000003047) ENSCGOG00000003030 ADGRL3 (ENSCGOG00000001017) smim18 (ENSCGOG00000000954) gtf2e2 (ENSCGOG00000000950) DCTN6 (ENSCGOG00000000927) ENSCGOG00000000921 rbpja (ENSCGOG00000000823) #22 STIM2 (ENSCGOG00000000558) #25 ENSCGOG00000000437 crmp1 (ENSCGOG00000000289) WFS1 (ENSCGOG00000000176) ppp2r2ca (ENSCGOG00000000122) ENSCGOG00000000076 hpf1 (ENSCGOG00000023505) ENSCGOG00000021379 camk2d2 (ENSCGOG00000016254) ENSCGOG00000016095 ENSCGOG00000016071 polr1e (ENSCGOG00000015973) ZBTB5 (ENSCGOG00000015972) grhprb (ENSCGOG00000015954) UBA6 (ENSCGOG00000013976) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b Anabantaria ANCESTRAL SPECIES 1 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a Zig-zag eel MODERN SPECIES ENSMAMG00000002686 ENSMAMG00000002670 ENSMAMG00000002562 ENSMAMG00000002550 ENSMAMG00000002529 ENSMAMG00000002446 ENSMAMG00000002219 ENSMAMG00000002197 ENSMAMG00000028189 ENSMAMG00000028522 ENSMAMG00000025250 SMIM18 (ENSMAMG00000002067) GTF2E2 (ENSMAMG00000002039) DCTN6 (ENSMAMG00000002028) ENSMAMG00000002005 rbpja (ENSMAMG00000001939) #22 ENSMAMG00000001901 #25 ENSMAMG00000001890 ENSMAMG00000024407 crmp1 (ENSMAMG00000001735) WFS1 (ENSMAMG00000001700) ppp2r2ca (ENSMAMG00000001659) ENSMAMG00000001584 hpf1 (ENSMAMG00000001555) ENSMAMG00000001435 camk2d2 (ENSMAMG00000001316) ENSMAMG00000001287 ENSMAMG00000001272 FBXO10 (ENSMAMG00000001233) ENSMAMG00000001260 ZBTB5 (ENSMAMG00000001195) Anabantoidei ANCESTRAL SPECIES ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Climbing perch MODERN SPECIES ENSATEG00000021757 ENSATEG00000021737 ENSATEG00000021687 exoc1l (ENSATEG00000021675) ENSATEG00000021647 ENSATEG00000021558 ENSATEG00000021528 ENSATEG00000021335 ENSATEG00000021292 ENSATEG00000029001 ENSATEG00000021184 SMIM18 (ENSATEG00000021153) GTF2E2 (ENSATEG00000021140) DCTN6 (ENSATEG00000021125) ENSATEG00000021103 rbpja (ENSATEG00000021086) #22 ENSATEG00000020936 #25 ENSATEG00000020897 crmp1 (ENSATEG00000020872) WFS1 (ENSATEG00000020851) ppp2r2ca (ENSATEG00000020822) hpf1 (ENSATEG00000020795) ENSATEG00000020709 camk2d2 (ENSATEG00000020671) ENSATEG00000020661 CXCL8 (ENSATEG00000028656) FBXO10 (ENSATEG00000020631) ENSATEG00000020609 ZBTB5 (ENSATEG00000020589) ENSATEG00000020561 ENSATEG00000020397 Siamese fighting fish MODERN SPECIES fip1l1b (ENSBSLG00000012315) kitb (ENSBSLG00000012404) clockb (ENSBSLG00000012519) exoc1l (ENSBSLG00000012657) smc2 (ENSBSLG00000012664) ecpas (ENSBSLG00000012695) kdm4c (ENSBSLG00000012714) ENSBSLG00000012935 TYRP1 (ENSBSLG00000020744) ENSBSLG00000020767 ENSBSLG00000020834 gtf2e2 (ENSBSLG00000022545) smim18 (ENSBSLG00000022561) DCTN6 (ENSBSLG00000022566) HGSNAT (ENSBSLG00000022618) rbpja (ENSBSLG00000022652) #22 ENSBSLG00000022659 #25 ENSBSLG00000022796 crmp1 (ENSBSLG00000022943) WFS1 (ENSBSLG00000023569) ppp2r2ca (ENSBSLG00000023578) ENSBSLG00000023594 hpf1 (ENSBSLG00000023652) ENSBSLG00000023696 camk2d2 (ENSBSLG00000024485) ENSBSLG00000024701 ENSBSLG00000024710 FBXO10 (ENSBSLG00000024838) polr1e (ENSBSLG00000024846) ZBTB5 (ENSBSLG00000024854) grhprb (ENSBSLG00000024865) Carangaria ANCESTRAL SPECIES ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Carangaria_A ANCESTRAL SPECIES 14 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 Seriola ANCESTRAL SPECIES 29 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Greater amberjack MODERN SPECIES 102 exoc1l (ENSSDUG00000004042) smc2 (ENSSDUG00000003986) ecpas (ENSSDUG00000003877) ENSSDUG00000003831 ENSSDUG00000003819 ENSSDUG00000003802 ENSSDUG00000003734 TYRP1 (ENSSDUG00000003709) ENSSDUG00000003680 ADGRL3 (ENSSDUG00000003616) ENSSDUG00000003605 smim18 (ENSSDUG00000003601) gtf2e2 (ENSSDUG00000003582) DCTN6 (ENSSDUG00000003551) ENSSDUG00000003524 rbpja (ENSSDUG00000003478) #22 STIM2 (ENSSDUG00000003300) #25 Yellowtail amberjack MODERN SPECIES 2982 exoc1l (ENSSLDG00000024231) smc2 (ENSSLDG00000024240) ecpas (ENSSLDG00000024289) kdm4c (ENSSLDG00000024407) ENSSLDG00000024480 ENSSLDG00000024512 ENSSLDG00000024546 TYRP1 (ENSSLDG00000024554) ENSSLDG00000024571 ADGRL3 (ENSSLDG00000024579) ENSSLDG00000024602 gtf2e2 (ENSSLDG00000024609) smim18 (ENSSLDG00000024621) DCTN6 (ENSSLDG00000024624) ENSSLDG00000024640 rbpja (ENSSLDG00000024657) #22 STIM2 (ENSSLDG00000024677) #25 ENSSLDG00000024689 ENSSLDG00000024695 crmp1 (ENSSLDG00000024703) WFS1 (ENSSLDG00000024747) ppp2r2ca (ENSSLDG00000024757) ENSSLDG00000024772 ENSSLDG00000024778 hpf1 (ENSSLDG00000024781) ANK2 (ENSSLDG00000024800) camk2d2 (ENSSLDG00000024872) ENSSLDG00000024899 ENSSLDG00000024905 FBXO10 (ENSSLDG00000024907) polr1e (ENSSLDG00000024918) Barramundi perch MODERN SPECIES 237 fip1l1b (ENSLCAG00010027597) kitb (ENSLCAG00010027617) clockb (ENSLCAG00010027638) exoc1l (ENSLCAG00010027647) smc2 (ENSLCAG00010027653) ecpas (ENSLCAG00010027680) kdm4c (ENSLCAG00010027698) ENSLCAG00010027801 TYRP1 (ENSLCAG00010028014) ENSLCAG00010028016 ADGRL3 (ENSLCAG00010028018) gtf2e2 (ENSLCAG00010028020) smim18 (ENSLCAG00010028021) ENSLCAG00010028022 HGSNAT (ENSLCAG00010028023) rbpja (ENSLCAG00010028024) #22 STIM2 (ENSLCAG00010028025) #25 ENSLCAG00010028026 ENSLCAG00010028027 ENSLCAG00010028028 ENSLCAG00010028029 crmp1 (ENSLCAG00010028030) WFS1 (ENSLCAG00010028032) ppp2r2ca (ENSLCAG00010028033) ENSLCAG00010028034 hpf1 (ENSLCAG00010028035) ENSLCAG00010028036 Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a #22 ENSGT00390000000214.a.b.l #25 ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 ENSGT00940000175443 ENSGT00530000063425.a.a.a.b ENSGT00390000018004 ENSGT00940000160246.c.a ENSGT00940000165381 Turbot MODERN SPECIES 20 ENSSMAG00000013444 ENSSMAG00000013415 ENSSMAG00000013284 exoc1l (ENSSMAG00000037823) ENSSMAG00000013228 ENSSMAG00000013083 ENSSMAG00000012984 ENSSMAG00000012743 ENSSMAG00000012712 ENSSMAG00000012539 ENSSMAG00000012386 SMIM18 (ENSSMAG00000012371) GTF2E2 (ENSSMAG00000012351) DCTN6 (ENSSMAG00000012302) ENSSMAG00000012281 rbpja (ENSSMAG00000012195) #22 ENSSMAG00000012189 #25 ENSSMAG00000024259 ENSSMAG00000027615 crmp1 (ENSSMAG00000012069) WFS1 (ENSSMAG00000034750) ppp2r2ca (ENSSMAG00000012018) ENSSMAG00000012004 hpf1 (ENSSMAG00000011981) ENSSMAG00000027862 ENSSMAG00000011868 camk2d2 (ENSSMAG00000011762) CXCL8 (ENSSMAG00000011742) ENSSMAG00000011731 FBXO10 (ENSSMAG00000011711) ENSSMAG00000011672 Tongue sole MODERN SPECIES 19 fip1l1b (ENSCSEG00000006583) kitb (ENSCSEG00000006569) clockb (ENSCSEG00000006544) exoc1l (ENSCSEG00000006537) smc2 (ENSCSEG00000006524) ecpas (ENSCSEG00000006470) kdm4c (ENSCSEG00000006423) ENSCSEG00000006286 TYRP1 (ENSCSEG00000006262) ENSCSEG00000006192 ADGRL3 (ENSCSEG00000006125) smim18 (ENSCSEG00000006118) gtf2e2 (ENSCSEG00000006111) DCTN6 (ENSCSEG00000006103) ENSCSEG00000006097 rbpja (ENSCSEG00000006030) #22 STIM2 (ENSCSEG00000006014) #25 ENSCSEG00000005997 crmp1 (ENSCSEG00000005981) WFS1 (ENSCSEG00000005973) ppp2r2ca (ENSCSEG00000005966) hpf1 (ENSCSEG00000005962) ANK2 (ENSCSEG00000005938) camk2d2 (ENSCSEG00000005184) ENSCSEG00000005131 FBXO10 (ENSCSEG00000005128) ENSCSEG00000005125 polr1e (ENSCSEG00000005121) ZBTB5 (ENSCSEG00000005116) grhprb (ENSCSEG00000005109) UBA6 (ENSCSEG00000005081) Pinecone sodierfish MODERN SPECIES kitb (ENSMMDG00005003764) clockb (ENSMMDG00005004044) exoc1l (ENSMMDG00005006062) smc2 (ENSMMDG00005006069) ecpas (ENSMMDG00005006181) kdm4c (ENSMMDG00005008177) ENSMMDG00005008242 TYRP1 (ENSMMDG00005008254) ENSMMDG00005008262 ADGRL3 (ENSMMDG00005008289) ENSMMDG00005008314 gtf2e2 (ENSMMDG00005008318) smim18 (ENSMMDG00005008323) ENSMMDG00005008328 ENSMMDG00005008335 rbpja (ENSMMDG00005008348) #22 STIM2 (ENSMMDG00005008421) #25 ENSMMDG00005008425 ENSMMDG00005008437 ENSMMDG00005008446 ENSMMDG00005008476 ENSMMDG00005008483 ENSMMDG00005008494 ITLN1 (ENSMMDG00005008500) crmp1 (ENSMMDG00005008507) WFS1 (ENSMMDG00005008511) ppp2r2ca (ENSMMDG00005008515) ENSMMDG00005008519 hpf1 (ENSMMDG00005008525) ENSMMDG00005008531 ENSMMDG00005008691 Cod DUPLICATION Cod MODERN SPECIES 16 stx8 (ENSGMOG00000018789) ENSGMOG00000020061 ENSGMOG00000005339 ENSGMOG00000005282 ENSGMOG00000005228 ENSGMOG00000005206 ENSGMOG00000005190 ENSGMOG00000031432 ENSGMOG00000034123 ENSGMOG00000023389 ENSGMOG00000025924 SMIM18 (ENSGMOG00000005036) GTF2E2 (ENSGMOG00000005020) DCTN6 (ENSGMOG00000005001) ENSGMOG00000004969 rbpja (ENSGMOG00000004951) #22 ENSGMOG00000004792 #25 ENSGMOG00000000689 ENSGMOG00000031805 ENSGMOG00000026775 ENSGMOG00000034682 ENSGMOG00000025853 ENSGMOG00000025268 ENSGMOG00000033539 ENSGMOG00000009655 ENSGMOG00000006707 ENSGMOG00000006725 ENSGMOG00000006737 ENSGMOG00000006752 ENSGMOG00000031371 ENSGMOG00000006820 Cod MODERN SPECIES 8 ENSGMOG00000029107 ENSGMOG00000029648 oxa1l (ENSGMOG00000013345) ENSGMOG00000024061 slc7a7 (ENSGMOG00000013482) ENSGMOG00000034378 ENSGMOG00000013492 ttc5 (ENSGMOG00000013499) ENSGMOG00000013509 ENSGMOG00000034044 ENSGMOG00000013667 ENSGMOG00000013682 ENSGMOG00000013695 smim20 (ENSGMOG00000024869) #20 ENSGMOG00000025836 RBPJ (ENSGMOG00000006156) #22 CCKAR (ENSGMOG00000006226) #23 ENSGMOG00000022554 tbc1d19 (ENSGMOG00000006234) #24 STIM2 (ENSGMOG00000017713) #25 ENSGMOG00000024189 ENSGMOG00000030988 ENSGMOG00000031042 ENSGMOG00000013350 ENSGMOG00000025797 ENSGMOG00000018828 ENSGMOG00000036646 ENSGMOG00000034090 ENSGMOG00000023291 ENSGMOG00000010496 ENSGMOG00000023726 Clupeocephala ANCESTRAL SPECIES 179 ENSGT00940000168370 ENSGT00390000012556 #14 ENSGT00950000182850.a.b.a.a ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00950000183712 ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT01100000263482.F ENSGT00940000157250 ENSGT00390000018549 ENSGT00940000162871 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.w.a #28 ENSGT01030000234945 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 Euteleosteomorpha ANCESTRAL SPECIES 78 ENSGT00940000168370 ENSGT00390000012556 #14 ENSGT00950000182850.a.b.a.a ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00950000183712 ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT01100000263482.F ENSGT00940000157250 ENSGT00390000018549 ENSGT00940000162871 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 ENSGT00940000158370 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 Acanthomorphata ANCESTRAL SPECIES 50 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00440000037582 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00970000198440 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00980000199058 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00440000037582 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Eupercaria ANCESTRAL SPECIES 19 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00390000006227 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 Tetraodon MODERN SPECIES 14 slc7a7 (ENSTNIG00000013009) ENSTNIG00000013008 CCNB1IP1 (ENSTNIG00000013007) ttc5 (ENSTNIG00000013006) mettl3 (ENSTNIG00000013005) tm4sf5 (ENSTNIG00000013004) zgc:103586 (ENSTNIG00000013003) fis1 (ENSTNIG00000013002) cldn15a (ENSTNIG00000013001) dnajc3b (ENSTNIG00000013000) naa38 (ENSTNIG00000012999) CHD3 (ENSTNIG00000012998) tnfsf12 (ENSTNIG00000012997) ENSTNIG00000002037 MAN2B2 (ENSTNIG00000012995) RBPJ (ENSTNIG00000012994) #22 CCKAR (ENSTNIG00000012993) #23 tbc1d19 (ENSTNIG00000012992) #24 STIM2 (ENSTNIG00000012991) #25 PCDH7 (ENSTNIG00000006929) #28 ENSTNIG00000006229 ENSTNIG00000000703 ENSTNIG00000007196 rell1 (ENSTNIG00000007197) per1b (ENSTNIG00000007198) pcolceb (ENSTNIG00000007199) ENSTNIG00000007200 pcolceb (ENSTNIG00000006851) ENSTNIG00000006852 ENSTNIG00000006853 cnpy4 (ENSTNIG00000006854) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 23 zgc:103586 (ENSLBEG00000028502) fis1 (ENSLBEG00000028500) cldn15a (ENSLBEG00000028496) dnajc3b (ENSLBEG00000028493) naa38 (ENSLBEG00000028489) CHD3 (ENSLBEG00000028485) ENSLBEG00000028482 tnfsf12 (ENSLBEG00000028479) sat2a.2 (ENSLBEG00000028473) ENSLBEG00000028472 ENSLBEG00000028470 ENSLBEG00000028467 ENSLBEG00000028465 smim20 (ENSLBEG00000028464) #20 RBPJ (ENSLBEG00000028460) #22 ENSLBEG00000028457 tbc1d19 (ENSLBEG00000028445) #24 STIM2 (ENSLBEG00000028437) #25 PCDH7 (ENSLBEG00000028428) #28 ENSLBEG00000028416 DTHD1 (ENSLBEG00000028403) ENSLBEG00000028402 NWD2 (ENSLBEG00000028396) ENSLBEG00000028394 ENSLBEG00000028381 rell1 (ENSLBEG00000028367) pcolceb (ENSLBEG00000028362) ENSLBEG00000028355 ENSLBEG00000028354 ENSLBEG00000028352 Ballan wrasse MODERN SPECIES 2421 ENSLBEG00000005448 #22 ENSLBEG00000005406 Eupecaria_B ANCESTRAL SPECIES 20 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Perciformes ANCESTRAL SPECIES 19 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a Cottioidei ANCESTRAL SPECIES 20 ENSGT00390000006227 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a Lumpfish MODERN SPECIES 9 ttc5 (ENSCLMG00005007344) mettl3 (ENSCLMG00005007346) tm4sf5 (ENSCLMG00005007348) zgc:103586 (ENSCLMG00005007369) fis1 (ENSCLMG00005007370) cldn15a (ENSCLMG00005007371) dnajc3b (ENSCLMG00005007373) naa38 (ENSCLMG00005007381) CHD3 (ENSCLMG00005007477) ENSCLMG00005018955 tnfsf12 (ENSCLMG00005018959) sat2a.2 (ENSCLMG00005018961) ENSCLMG00005018965 MAN2B2 (ENSCLMG00005018966) smim20 (ENSCLMG00005018974) #20 RBPJ (ENSCLMG00005018975) #22 CCKAR (ENSCLMG00005019129) #23 tbc1d19 (ENSCLMG00005019133) #24 STIM2 (ENSCLMG00005019259) #25 PCDH7 (ENSCLMG00005019408) #28 ENSCLMG00005019409 #28 ENSCLMG00005019410 DTHD1 (ENSCLMG00005019411) NWD2 (ENSCLMG00005019412) ENSCLMG00005019413 rell1 (ENSCLMG00005019414) per1b (ENSCLMG00005019416) pcolceb (ENSCLMG00005019418) ENSCLMG00005019427 ENSCLMG00005019428 cnpy4 (ENSCLMG00005019458) Perciformes_a ANCESTRAL SPECIES 18 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT01060000250085 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Pike perch MODERN SPECIES 81 ttc5 (ENSSLUG00000018610) mettl3 (ENSSLUG00000018627) tm4sf5 (ENSSLUG00000018644) ENSSLUG00000018650 zgc:103586 (ENSSLUG00000018661) fis1 (ENSSLUG00000018672) cldn15a (ENSSLUG00000018675) dnajc3b (ENSSLUG00000018715) naa38 (ENSSLUG00000019240) CHD3 (ENSSLUG00000019415) tnfsf12 (ENSSLUG00000022559) sat2a.2 (ENSSLUG00000022569) ENSSLUG00000022598 MAN2B2 (ENSSLUG00000022634) smim20 (ENSSLUG00000022672) #20 RBPJ (ENSSLUG00000022688) #22 CCKAR (ENSSLUG00000022732) #23 tbc1d19 (ENSSLUG00000022768) #24 STIM2 (ENSSLUG00000022815) #25 PCDH7 (ENSSLUG00000022841) #28 ENSSLUG00000022847 ENSSLUG00000022854 ENSSLUG00000012312 NWD2 (ENSSLUG00000012318) ENSSLUG00000012324 rell1 (ENSSLUG00000012328) zpax4 (ENSSLUG00000012335) Channel bull blenny MODERN SPECIES 9 ttc5 (ENSCGOG00000011444) mettl3 (ENSCGOG00000011414) tm4sf5 (ENSCGOG00000011390) zgc:103586 (ENSCGOG00000011388) fis1 (ENSCGOG00000011377) cldn15a (ENSCGOG00000011375) dnajc3b (ENSCGOG00000011303) naa38 (ENSCGOG00000011299) CHD3 (ENSCGOG00000011146) tnfsf12 (ENSCGOG00000011139) sat2a.2 (ENSCGOG00000011135) ENSCGOG00000011130 ENSCGOG00000011127 MAN2B2 (ENSCGOG00000011043) smim20 (ENSCGOG00000011039) #20 RBPJ (ENSCGOG00000010659) #22 CCKAR (ENSCGOG00000010625) #23 tbc1d19 (ENSCGOG00000010296) #24 STIM2 (ENSCGOG00000010239) #25 PCDH7 (ENSCGOG00000010234) #28 ENSCGOG00000010233 ENSCGOG00000010232 ENSCGOG00000010182 ENSCGOG00000010175 NWD2 (ENSCGOG00000010171) ENSCGOG00000010170 rell1 (ENSCGOG00000010169) per1b (ENSCGOG00000009956) pcolceb (ENSCGOG00000009905) ENSCGOG00000009900 ENSCGOG00000009835 Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Gilthead seabream MODERN SPECIES 1 ENSSAUG00010006526 zgc:103586 (ENSSAUG00010006530) FIS1 (ENSSAUG00010006534) cldn15a (ENSSAUG00010006535) dnajc3b (ENSSAUG00010006545) naa38 (ENSSAUG00010007644) ENSSAUG00010007676 tnfsf12 (ENSSAUG00010011877) ENSSAUG00010011880 ENSSAUG00010011887 ENSSAUG00010011889 ENSSAUG00010011893 ENSSAUG00010011894 MAN2B2 (ENSSAUG00010011900) smim20 (ENSSAUG00010012641) #20 RBPJ (ENSSAUG00010012659) #22 CCKAR (ENSSAUG00010013172) #23 tbc1d19 (ENSSAUG00010013174) #24 STIM2 (ENSSAUG00010013199) #25 PCDH7 (ENSSAUG00010013542) #28 ENSSAUG00010013551 DTHD1 (ENSSAUG00010013966) NWD2 (ENSSAUG00010013971) ENSSAUG00010013977 rell1 (ENSSAUG00010013981) per1b (ENSSAUG00010014015) pcolceb (ENSSAUG00010014136) ENSSAUG00010014143 ENSSAUG00010014145 ENSSAUG00010014146 cnpy4 (ENSSAUG00010014149) Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Large yellow croaker MODERN SPECIES 485 tm4sf5 (ENSLCRG00005012356) ENSLCRG00005012355 zgc:103586 (ENSLCRG00005012351) fis1 (ENSLCRG00005012349) cldn15a (ENSLCRG00005012348) dnajc3b (ENSLCRG00005011240) naa38 (ENSLCRG00005011231) CHD3 (ENSLCRG00005001132) tnfsf12 (ENSLCRG00005021076) ENSLCRG00005021074 ENSLCRG00005021072 ENSLCRG00005021070 ENSLCRG00005021067 MAN2B2 (ENSLCRG00005021060) smim20 (ENSLCRG00005021058) #20 RBPJ (ENSLCRG00005020958) #22 CCKAR (ENSLCRG00005020952) #23 exoc6b (ENSLCRG00005020905) tkfc (ENSLCRG00005020789) ENSLCRG00005020779 ENSLCRG00005020777 cmasa (ENSLCRG00005020774) ovol1a (ENSLCRG00005020772) mus81 (ENSLCRG00005020771) ENSLCRG00005020769 ENSLCRG00005020767 ENSLCRG00005020766 ENSLCRG00005020765 MYADM (ENSLCRG00005020764) ENSLCRG00005020739 vangl2 (ENSLCRG00005020733) European seabass MODERN SPECIES 16 ENSDLAG00005006296 ENSDLAG00005006278 ENSDLAG00005006260 ENSDLAG00005006249 ENSDLAG00005034522 fis1 (ENSDLAG00005006210) ENSDLAG00005006209 dnajc3b (ENSDLAG00005022741) ENSDLAG00005030688 ENSDLAG00005017867 tnfsf12 (ENSDLAG00005017683) sat2a.2 (ENSDLAG00005017678) ENSDLAG00005027977 smim20 (ENSDLAG00005032754) #20 ENSDLAG00005017600 RBPJ (ENSDLAG00005034416) #22 ENSDLAG00005017064 tbc1d19 (ENSDLAG00005016902) #24 STIM2 (ENSDLAG00005016523) #25 PCDH7 (ENSDLAG00005016495) #28 ENSDLAG00005015900 DTHD1 (ENSDLAG00005015828) NWD2 (ENSDLAG00005015809) ENSDLAG00005015789 RELL1 (ENSDLAG00005031395) ENSDLAG00005015065 ENSDLAG00005015012 ENSDLAG00005015002 ENSDLAG00005014985 ENSDLAG00005014943 cnpy4 (ENSDLAG00005014925) Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Anabantaria ANCESTRAL SPECIES 19 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Zig-zag eel MODERN SPECIES 9 ENSMAMG00000000430 fis1 (ENSMAMG00000026477) ENSMAMG00000026017 dnajc3b (ENSMAMG00000000474) ENSMAMG00000027071 ENSMAMG00000000564 ENSMAMG00000000665 tnfsf12 (ENSMAMG00000000677) ENSMAMG00000000707 ENSMAMG00000024604 ENSMAMG00000027744 ENSMAMG00000000739 ENSMAMG00000000761 ENSMAMG00000000773 smim20 (ENSMAMG00000000851) #20 RBPJ (ENSMAMG00000000866) #22 CCKAR (ENSMAMG00000000922) #23 tbc1d19 (ENSMAMG00000000973) #24 STIM2 (ENSMAMG00000001115) #25 PCDH7 (ENSMAMG00000001148) #28 ENSMAMG00000001177 ENSMAMG00000001221 ENSMAMG00000001243 NWD2 (ENSMAMG00000001275) ENSMAMG00000025977 RELL1 (ENSMAMG00000001360) ENSMAMG00000001379 ENSMAMG00000001473 ENSMAMG00000025692 ENSMAMG00000001649 cnpy4 (ENSMAMG00000001907) Anabantoidei ANCESTRAL SPECIES 24 ENSGT00390000006227 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000001817 CCNB1IP1 (ENSBSLG00000001820) ttc5 (ENSBSLG00000001826) mettl3 (ENSBSLG00000001830) tm4sf5 (ENSBSLG00000001841) zgc:103586 (ENSBSLG00000001846) cldn15a (ENSBSLG00000001851) dnajc3b (ENSBSLG00000001862) naa38 (ENSBSLG00000001869) ENSBSLG00000002016 tnfsf12 (ENSBSLG00000002135) sat2a.2 (ENSBSLG00000002151) ENSBSLG00000002167 MAN2B2 (ENSBSLG00000002325) smim20 (ENSBSLG00000002760) #20 RBPJ (ENSBSLG00000002816) #22 CCKAR (ENSBSLG00000003013) #23 tbc1d19 (ENSBSLG00000003019) #24 STIM2 (ENSBSLG00000003795) #25 ENSBSLG00000004030 PCDH7 (ENSBSLG00000004046) #28 ENSBSLG00000004096 DTHD1 (ENSBSLG00000004288) NWD2 (ENSBSLG00000004767) ENSBSLG00000004820 rell1 (ENSBSLG00000004861) per1b (ENSBSLG00000004934) pcolceb (ENSBSLG00000005246) ENSBSLG00000005348 ENSBSLG00000005381 ENSBSLG00000005443 Climbing perch MODERN SPECIES 9 ttc5 (ENSATEG00000001222) ENSATEG00000001187 ENSATEG00000001125 ENSATEG00000001120 fis1 (ENSATEG00000027779) ENSATEG00000001079 dnajc3b (ENSATEG00000001015) ENSATEG00000029131 ENSATEG00000000848 tnfsf12 (ENSATEG00000000804) sat2a.2 (ENSATEG00000029588) ENSATEG00000000737 ENSATEG00000000709 ENSATEG00000000701 smim20 (ENSATEG00000000682) #20 RBPJ (ENSATEG00000000635) #22 CCKAR (ENSATEG00000000609) #23 STIM2 (ENSATEG00000000502) #25 PCDH7 (ENSATEG00000000477) #28 ENSATEG00000029285 #28 ENSATEG00000000461 DTHD1 (ENSATEG00000000425) NWD2 (ENSATEG00000000389) ENSATEG00000000374 RELL1 (ENSATEG00000000367) ENSATEG00000000356 ENSATEG00000000342 ENSATEG00000028316 ENSATEG00000000331 ENSATEG00000000312 cnpy4 (ENSATEG00000000305) Carangaria ANCESTRAL SPECIES 20 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 Carangaria_A ANCESTRAL SPECIES 26 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 Seriola ANCESTRAL SPECIES 24 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00940000175475 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 Yellowtail amberjack MODERN SPECIES 3268 ENSSLDG00000003175 fis1 (ENSSLDG00000003136) cldn15a (ENSSLDG00000003119) dnajc3b (ENSSLDG00000003048) naa38 (ENSSLDG00000003013) ENSSLDG00000002989 ENSSLDG00000002947 ENSSLDG00000002904 ENSSLDG00000002890 tnfsf12 (ENSSLDG00000002823) sat2a.2 (ENSSLDG00000002808) ENSSLDG00000002792 ENSSLDG00000002778 MAN2B2 (ENSSLDG00000002758) smim20 (ENSSLDG00000002742) #20 RBPJ (ENSSLDG00000002682) #22 CCKAR (ENSSLDG00000002618) #23 tbc1d19 (ENSSLDG00000002490) #24 Greater amberjack MODERN SPECIES 153 zgc:103586 (ENSSDUG00000006030) ENSSDUG00000006021 fis1 (ENSSDUG00000006006) cldn15a (ENSSDUG00000005931) dnajc3b (ENSSDUG00000005864) naa38 (ENSSDUG00000005842) CHD3 (ENSSDUG00000005792) ENSSDUG00000005772 ENSSDUG00000005749 tnfsf12 (ENSSDUG00000005715) sat2a.2 (ENSSDUG00000005689) ENSSDUG00000005674 ENSSDUG00000005656 MAN2B2 (ENSSDUG00000005630) smim20 (ENSSDUG00000005618) #20 RBPJ (ENSSDUG00000005567) #22 CCKAR (ENSSDUG00000005548) #23 tbc1d19 (ENSSDUG00000005411) #24 Barramundi perch MODERN SPECIES 30 mettl3 (ENSLCAG00010006648) tm4sf5 (ENSLCAG00010006652) ENSLCAG00010006656 zgc:103586 (ENSLCAG00010006661) fis1 (ENSLCAG00010006670) cldn15a (ENSLCAG00010006680) dnajc3b (ENSLCAG00010006692) naa38 (ENSLCAG00010006724) CHD3 (ENSLCAG00010006804) tnfsf12 (ENSLCAG00010007016) sat2a.2 (ENSLCAG00010007020) ENSLCAG00010007022 ENSLCAG00010007025 MAN2B2 (ENSLCAG00010007063) smim20 (ENSLCAG00010007215) #20 RBPJ (ENSLCAG00010007241) #22 ENSLCAG00010007305 tbc1d19 (ENSLCAG00010007334) #24 STIM2 (ENSLCAG00010007437) #25 Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 Tongue sole MODERN SPECIES mettl3 (ENSCSEG00000004439) si:dkey-85k7.7 (ENSCSEG00000004446) tm4sf5 (ENSCSEG00000004451) fis1 (ENSCSEG00000004455) zgc:103586 (ENSCSEG00000004460) cldn15a (ENSCSEG00000004464) dnajc3b (ENSCSEG00000004470) naa38 (ENSCSEG00000004480) CHD3 (ENSCSEG00000004489) ENSCSEG00000004557 tnfsf12 (ENSCSEG00000004560) sat2a.2 (ENSCSEG00000004567) ENSCSEG00000004573 ENSCSEG00000004575 smim20 (ENSCSEG00000004579) #20 RBPJ (ENSCSEG00000004581) #22 CCKAR (ENSCSEG00000004584) #23 tbc1d19 (ENSCSEG00000004592) #24 STIM2 (ENSCSEG00000004617) #25 AFAP1 (ENSCSEG00000004634) ABLIM2 (ENSCSEG00000004654) zcchc4 (ENSCSEG00000004671) #14 ENSCSEG00000004675 ENSCSEG00000004679 pde5ab (ENSCSEG00000004689) mad2l1 (ENSCSEG00000004726) ARSJ (ENSCSEG00000004731) rpl17 (ENSCSEG00000004760) camk2d1 (ENSCSEG00000004948) cyp26b1 (ENSCSEG00000004973) dysf (ENSCSEG00000004989) Turbot MODERN SPECIES 11 ENSSMAG00000006289 ENSSMAG00000006327 fis1 (ENSSMAG00000006342) ENSSMAG00000006363 dnajc3b (ENSSMAG00000006371) ENSSMAG00000006429 ENSSMAG00000006451 ENSSMAG00000006597 tnfsf12 (ENSSMAG00000006614) sat2a.2 (ENSSMAG00000022758) ENSSMAG00000026882 ENSSMAG00000006694 ENSSMAG00000034893 ENSSMAG00000006703 smim20 (ENSSMAG00000006724) #20 RBPJ (ENSSMAG00000006743) #22 CCKAR (ENSSMAG00000006793) #23 tbc1d19 (ENSSMAG00000006827) #24 STIM2 (ENSSMAG00000006891) #25 PCDH7 (ENSSMAG00000007878) #28 ENSSMAG00000007911 ENSSMAG00000007944 NWD2 (ENSSMAG00000008034) ENSSMAG00000008047 RELL1 (ENSSMAG00000008051) ENSSMAG00000008060 ENSSMAG00000008076 ENSSMAG00000022292 ENSSMAG00000008116 cnpy4 (ENSSMAG00000008141) ENSSMAG00000008156 Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b Cichlidae ANCESTRAL SPECIES 20 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b.r ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b.i.b ENSGT00930000151033 Pseudocrenilabrinae_A ANCESTRAL SPECIES 23 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b.r.a.a.a ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000164656.b.b.a.a.a.a.a.a ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000165960.b.i.b Haplochromini ANCESTRAL SPECIES 31 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001.p ENSGT00510000050706 ENSGT00950000183121.a.c.b.r.a.a.a ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000164656.b.b.a.a.a.a.a.a ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000163927.a.a.q.b.a.b.a.b ENSGT00940000163927.a.a.q.b.a.b.a.a.b.a ENSGT00940000163927.a.a.q.b.a.b.a.a.a Burton s mouthbrooder MODERN SPECIES 343 mettl3 (ENSHBUG00000019774) si:dkey-85k7.7 (ENSHBUG00000019792) tm4sf5 (ENSHBUG00000019802) zgc:103586 (ENSHBUG00000019833) fis1 (ENSHBUG00000019856) cldn15a (ENSHBUG00000019870) dnajc3b (ENSHBUG00000019906) naa38 (ENSHBUG00000019918) CHD3 (ENSHBUG00000019956) tnfsf12 (ENSHBUG00000019999) ENSHBUG00000020033 ENSHBUG00000020044 ENSHBUG00000020060 ENSHBUG00000020080 MAN2B2 (ENSHBUG00000020161) RBPJ (ENSHBUG00000020197) #22 CCKAR (ENSHBUG00000020229) #23 tbc1d19 (ENSHBUG00000020340) #24 STIM2 (ENSHBUG00000020356) #25 ENSHBUG00000020374 ENSHBUG00000020684 PCDH7 (ENSHBUG00000020724) #28 ENSHBUG00000020742 DTHD1 (ENSHBUG00000020754) NWD2 (ENSHBUG00000020786) ENSHBUG00000020805 rell1 (ENSHBUG00000020820) ENSHBUG00000020826 per1b (ENSHBUG00000020875) pcolceb (ENSHBUG00000020890) ENSHBUG00000020904 Haplochromini_A ANCESTRAL SPECIES 35 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001.p ENSGT00510000050706 ENSGT00950000183121.a.c.b.r.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000164656.b.b.a.a.a.a.a.a ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000163927.a.a.q.b.a.b.a.b ENSGT00940000163927.a.a.q.b.a.b.a.a.b.a Haplochromini_B ANCESTRAL SPECIES 25 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001.p ENSGT00510000050706 ENSGT00950000183121.a.c.b.r.a.a.a ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000164656.b.b.a.a.a.a.a.a ENSGT00940000159217 ENSGT00940000159264.f ENSGT00990000204615 ENSGT00940000163927.a.a.q.b.a.b.a.b ENSGT00940000163927.a.a.q.b.a.b.a.a.b.a Eastern happy MODERN SPECIES 15 mettl3 (ENSACLG00000009682) si:dkey-85k7.7 (ENSACLG00000009679) tm4sf5 (ENSACLG00000009675) zgc:103586 (ENSACLG00000009663) fis1 (ENSACLG00000009654) cldn15a (ENSACLG00000009567) dnajc3b (ENSACLG00000009551) naa38 (ENSACLG00000009549) CHD3 (ENSACLG00000009222) tnfsf12 (ENSACLG00000009209) ENSACLG00000009101 ENSACLG00000009082 ENSACLG00000009058 ENSACLG00000009047 MAN2B2 (ENSACLG00000008986) RBPJ (ENSACLG00000008949) #22 CCKAR (ENSACLG00000008928) #23 tbc1d19 (ENSACLG00000008818) #24 STIM2 (ENSACLG00000008804) #25 ENSACLG00000008789 ENSACLG00000008786 ENSACLG00000008179 PCDH7 (ENSACLG00000008168) #28 ENSACLG00000008159 ENSACLG00000007604 ENSACLG00000007302 ENSACLG00000007249 DTHD1 (ENSACLG00000007037) ENSACLG00000007032 NWD2 (ENSACLG00000007021) ENSACLG00000007009 Zebra mbuna MODERN SPECIES 1106 mettl3 (ENSMZEG00005021232) si:dkey-85k7.7 (ENSMZEG00005021238) tm4sf5 (ENSMZEG00005021241) zgc:103586 (ENSMZEG00005021244) fis1 (ENSMZEG00005021250) cldn15a (ENSMZEG00005021253) dnajc3b (ENSMZEG00005021259) naa38 (ENSMZEG00005021265) CHD3 (ENSMZEG00005021272) tnfsf12 (ENSMZEG00005021293) ENSMZEG00005021296 ENSMZEG00005021298 ENSMZEG00005021301 MAN2B2 (ENSMZEG00005021307) ENSMZEG00005021313 RBPJ (ENSMZEG00005021315) #22 CCKAR (ENSMZEG00005021319) #23 tbc1d19 (ENSMZEG00005021326) #24 STIM2 (ENSMZEG00005021340) #25 PCDH7 (ENSMZEG00005021344) #28 ENSMZEG00005021346 ENSMZEG00005021352 DTHD1 (ENSMZEG00005021362) NWD2 (ENSMZEG00005021371) ENSMZEG00005021375 rell1 (ENSMZEG00005021377) ENSMZEG00005021378 per1b (ENSMZEG00005021382) pcolceb (ENSMZEG00005021388) ENSMZEG00005021391 ENSMZEG00005021395 P. nyererei MODERN SPECIES 446 tm4sf5 (ENSPNYG00000021489) zgc:103586 (ENSPNYG00000021486) fis1 (ENSPNYG00000021467) cldn15a (ENSPNYG00000021455) dnajc3b (ENSPNYG00000021428) naa38 (ENSPNYG00000021415) ENSPNYG00000021398 ENSPNYG00000021369 ENSPNYG00000021353 tnfsf12 (ENSPNYG00000021338) ENSPNYG00000021327 ENSPNYG00000021316 ENSPNYG00000021298 smim20 (ENSPNYG00000021286) #20 MAN2B2 (ENSPNYG00000021248) RBPJ (ENSPNYG00000021202) #22 CCKAR (ENSPNYG00000021173) #23 tbc1d19 (ENSPNYG00000021123) #24 STIM2 (ENSPNYG00000021089) #25 PCDH7 (ENSPNYG00000021073) #28 Lyretail cichlid MODERN SPECIES 372 mettl3 (ENSNBRG00000023965) si:dkey-85k7.7 (ENSNBRG00000023967) tm4sf5 (ENSNBRG00000023969) zgc:103586 (ENSNBRG00000023973) fis1 (ENSNBRG00000023977) cldn15a (ENSNBRG00000000255) dnajc3b (ENSNBRG00000000306) naa38 (ENSNBRG00000000619) CHD3 (ENSNBRG00000000636) tnfsf12 (ENSNBRG00000000738) ENSNBRG00000000769 ENSNBRG00000000789 ENSNBRG00000000801 MAN2B2 (ENSNBRG00000000832) smim20 (ENSNBRG00000000899) #20 RBPJ (ENSNBRG00000000915) #22 CCKAR (ENSNBRG00000000971) #23 ENSNBRG00000001001 tbc1d19 (ENSNBRG00000001017) #24 STIM2 (ENSNBRG00000001092) #25 ENSNBRG00000001349 ENSNBRG00000001653 #28 PCDH7 (ENSNBRG00000001672) #28 ENSNBRG00000001686 ENSNBRG00000001756 NWD2 (ENSNBRG00000001779) ENSNBRG00000001820 rell1 (ENSNBRG00000001832) ENSNBRG00000001854 per1b (ENSNBRG00000001871) pcolceb (ENSNBRG00000001936) Nile tilapia MODERN SPECIES 15 ttc5 (ENSONIG00000009332) mettl3 (ENSONIG00000009328) tm4sf5 (ENSONIG00000042910) zgc:103586 (ENSONIG00000029695) fis1 (ENSONIG00000009318) cldn15a (ENSONIG00000009315) dnajc3b (ENSONIG00000009308) naa38 (ENSONIG00000031327) CHD3 (ENSONIG00000009292) tnfsf12 (ENSONIG00000009291) ENSONIG00000029694 ENSONIG00000030544 ENSONIG00000024604 MAN2B2 (ENSONIG00000009282) smim20 (ENSONIG00000036419) #20 RBPJ (ENSONIG00000009281) #22 CCKAR (ENSONIG00000009279) #23 tbc1d19 (ENSONIG00000009276) #24 STIM2 (ENSONIG00000009272) #25 ENSONIG00000032813 PCDH7 (ENSONIG00000009270) #28 ENSONIG00000009262 DTHD1 (ENSONIG00000009259) NWD2 (ENSONIG00000034757) ENSONIG00000021452 rell1 (ENSONIG00000009256) ENSONIG00000031019 per1b (ENSONIG00000009248) pcolceb (ENSONIG00000009245) ENSONIG00000035738 ENSONIG00000004847 Midas cichlid MODERN SPECIES 398 mettl3 (ENSACIG00000019871) si:dkey-85k7.7 (ENSACIG00000019867) tm4sf5 (ENSACIG00000019839) zgc:103586 (ENSACIG00000019809) fis1 (ENSACIG00000019792) cldn15a (ENSACIG00000019778) dnajc3b (ENSACIG00000019743) naa38 (ENSACIG00000019730) CHD3 (ENSACIG00000019671) tnfsf12 (ENSACIG00000019639) ENSACIG00000019621 ENSACIG00000019613 ENSACIG00000019597 MAN2B2 (ENSACIG00000019514) smim20 (ENSACIG00000019500) #20 RBPJ (ENSACIG00000019478) #22 ENSACIG00000019470 tbc1d19 (ENSACIG00000019445) #24 STIM2 (ENSACIG00000019410) #25 ENSACIG00000019375 ENSACIG00000019354 Pomacentridae ANCESTRAL SPECIES 126 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 Bicolor damselfish MODERN SPECIES 735 mettl3 (ENSSPAG00000013519) si:dkey-85k7.7 (ENSSPAG00000013572) tm4sf5 (ENSSPAG00000013580) zgc:103586 (ENSSPAG00000013592) fis1 (ENSSPAG00000013612) cldn15a (ENSSPAG00000013628) dnajc3b (ENSSPAG00000013641) naa38 (ENSSPAG00000013671) CHD3 (ENSSPAG00000013694) tnfsf12 (ENSSPAG00000013838) sat2a.2 (ENSSPAG00000013853) ENSSPAG00000013891 ENSSPAG00000013900 MAN2B2 (ENSSPAG00000013920) smim20 (ENSSPAG00000013946) #20 RBPJ (ENSSPAG00000013963) #22 CCKAR (ENSSPAG00000013995) #23 tbc1d19 (ENSSPAG00000014011) #24 STIM2 (ENSSPAG00000014063) #25 Pomacentridae_A ANCESTRAL SPECIES 129 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 Spiny chromis MODERN SPECIES 580 tm4sf5 (ENSAPOG00000005816) ENSAPOG00000000701 zgc:103586 (ENSAPOG00000005792) fis1 (ENSAPOG00000000778) cldn15a (ENSAPOG00000005737) dnajc3b (ENSAPOG00000005709) naa38 (ENSAPOG00000005647) CHD3 (ENSAPOG00000005614) tnfsf12 (ENSAPOG00000005479) ENSAPOG00000005462 ENSAPOG00000005443 ENSAPOG00000005412 ENSAPOG00000005390 MAN2B2 (ENSAPOG00000005373) smim20 (ENSAPOG00000005347) #20 RBPJ (ENSAPOG00000005326) #22 CCKAR (ENSAPOG00000005277) #23 tbc1d19 (ENSAPOG00000005236) #24 STIM2 (ENSAPOG00000005120) #25 Amphiprion ANCESTRAL SPECIES 156 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 Clown anemonefish MODERN SPECIES 1351 ENSAOCG00000020180 tardbpa (ENSAOCG00000020211) pgd (ENSAOCG00000020234) kif1b (ENSAOCG00000020388) ube4b (ENSAOCG00000020486) rbp7a (ENSAOCG00000020514) nmnat1 (ENSAOCG00000020534) lzic (ENSAOCG00000020567) clstn1 (ENSAOCG00000020668) tnfsf12 (ENSAOCG00000020696) sat2a.2 (ENSAOCG00000020748) ENSAOCG00000020768 ENSAOCG00000020786 smim20 (ENSAOCG00000020801) #20 MAN2B2 (ENSAOCG00000020941) RBPJ (ENSAOCG00000020984) #22 CCKAR (ENSAOCG00000021008) #23 tbc1d19 (ENSAOCG00000021112) #24 Orange clownfish MODERN SPECIES 15 si:dkey-85k7.7 (ENSAPEG00000006695) mettl3 (ENSAPEG00000006642) tm4sf5 (ENSAPEG00000006615) zgc:103586 (ENSAPEG00000006590) fis1 (ENSAPEG00000006545) cldn15a (ENSAPEG00000006507) dnajc3b (ENSAPEG00000006454) naa38 (ENSAPEG00000006441) CHD3 (ENSAPEG00000006341) tnfsf12 (ENSAPEG00000006285) sat2a.2 (ENSAPEG00000006269) ENSAPEG00000006252 ENSAPEG00000006215 smim20 (ENSAPEG00000006206) #20 MAN2B2 (ENSAPEG00000006118) RBPJ (ENSAPEG00000006063) #22 CCKAR (ENSAPEG00000005946) #23 tbc1d19 (ENSAPEG00000005880) #24 STIM2 (ENSAPEG00000005770) #25 ENSAPEG00000005748 ENSAPEG00000005729 ENSAPEG00000005718 ENSAPEG00000005689 ENSAPEG00000005672 ENSAPEG00000005652 mmp14a (ENSAPEG00000005500) mrpl52 (ENSAPEG00000005483) ENSAPEG00000005430 ENSAPEG00000005295 AJUBA (ENSAPEG00000005258) ENSAPEG00000005134 Atherinomorphae ANCESTRAL SPECIES 22 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a Oryzias ANCESTRAL SPECIES 21 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177834 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b.g ENSGT00940000156128.a ENSGT01030000234567.B.a.b.a.a ENSGT00940000166316 ENSGT00940000153491.b.b.b Oryzias_b ANCESTRAL SPECIES 18 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177834 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b.g ENSGT00940000156128.a ENSGT01030000234567.B.a.b.a.a ENSGT00940000166316 ENSGT00940000153491.b.b.b Indian medaka MODERN SPECIES 19 mettl3 (ENSOMEG00000013883) si:dkey-85k7.7 (ENSOMEG00000013853) tm4sf5 (ENSOMEG00000013836) fis1 (ENSOMEG00000000350) cldn15a (ENSOMEG00000013766) dnajc3b (ENSOMEG00000013742) naa38 (ENSOMEG00000013718) CHD3 (ENSOMEG00000013691) ENSOMEG00000013644 tnfsf12 (ENSOMEG00000013629) sat2a.2 (ENSOMEG00000013593) ENSOMEG00000013572 ENSOMEG00000013560 MAN2B2 (ENSOMEG00000000344) smim20 (ENSOMEG00000013502) #20 RBPJ (ENSOMEG00000013477) #22 CCKAR (ENSOMEG00000013399) #23 tbc1d19 (ENSOMEG00000013354) #24 STIM2 (ENSOMEG00000013261) #25 PCDH7 (ENSOMEG00000013194) #28 ENSOMEG00000013126 NWD2 (ENSOMEG00000012880) ENSOMEG00000012805 rell1 (ENSOMEG00000012793) per1b (ENSOMEG00000012728) pcolceb (ENSOMEG00000012561) ENSOMEG00000012530 ENSOMEG00000012512 ENSOMEG00000012500 ENSOMEG00000012453 ENSOMEG00000000821 Javanese ricefish MODERN SPECIES 9 slc7a7 (ENSOJAG00000005227) ENSOJAG00000005371 CCNB1IP1 (ENSOJAG00000005384) ttc5 (ENSOJAG00000005405) mettl3 (ENSOJAG00000005565) tm4sf5 (ENSOJAG00000005639) fis1 (ENSOJAG00000005646) cldn15a (ENSOJAG00000005664) dnajc3b (ENSOJAG00000005698) naa38 (ENSOJAG00000005871) tnfsf12 (ENSOJAG00000009415) sat2a.2 (ENSOJAG00000009427) ENSOJAG00000009444 MAN2B2 (ENSOJAG00000009488) smim20 (ENSOJAG00000009939) #20 RBPJ (ENSOJAG00000009983) #22 CCKAR (ENSOJAG00000010271) #23 tbc1d19 (ENSOJAG00000010293) #24 STIM2 (ENSOJAG00000010393) #25 ENSOJAG00000010640 PCDH7 (ENSOJAG00000010737) #28 ENSOJAG00000010767 ENSOJAG00000010832 ENSOJAG00000011455 ENSOJAG00000011466 NWD2 (ENSOJAG00000011479) ENSOJAG00000011485 rell1 (ENSOJAG00000011495) per1b (ENSOJAG00000011505) pcolceb (ENSOJAG00000011565) ENSOJAG00000010485 Oryzias_a ANCESTRAL SPECIES 27 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177834 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b.g ENSGT00940000156128.a ENSGT01030000234567.B.a.b.a.a ENSGT00940000166316.c ENSGT00940000153491.b.b.b Japanese Medaka HdrR MODERN SPECIES 9 mettl3 (ENSORLG00000007194) si:dkey-85k7.7 (ENSORLG00000025364) tm4sf5 (ENSORLG00000007179) fis1 (ENSORLG00000007174) cldn15a (ENSORLG00000007164) dnajc3b (ENSORLG00000007150) naa38 (ENSORLG00000007119) CHD3 (ENSORLG00000007107) ENSORLG00000030390 tnfsf12 (ENSORLG00000022957) sat2a.2 (ENSORLG00000023069) ENSORLG00000027376 ENSORLG00000028776 MAN2B2 (ENSORLG00000007017) smim20 (ENSORLG00000024014) #20 RBPJ (ENSORLG00000006995) #22 CCKAR (ENSORLG00000006989) #23 tbc1d19 (ENSORLG00000028729) #24 STIM2 (ENSORLG00000023978) #25 ENSORLG00000028007 ENSORLG00000024335 ENSORLG00000025772 ENSORLG00000029033 PCDH7 (ENSORLG00000006964) #28 ENSORLG00000026395 NWD2 (ENSORLG00000023423) ENSORLG00000023698 RELL1 (ENSORLG00000006940) per1b (ENSORLG00000006929) pcolceb (ENSORLG00000030017) ENSORLG00000006910 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a Aplocheiloidei ANCESTRAL SPECIES 68 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a ENSGT00940000166316 Turquoise killifish MODERN SPECIES 1613 CCNB1IP1 (ENSNFUG00015000639) ttc5 (ENSNFUG00015000653) mettl3 (ENSNFUG00015000679) tm4sf5 (ENSNFUG00015000707) zgc:103586 (ENSNFUG00015000719) FIS1 (ENSNFUG00015000727) CHD3 (ENSNFUG00015000749) ENSNFUG00015000790 tnfsf12 (ENSNFUG00015000794) ENSNFUG00015000798 ENSNFUG00015000805 MAN2B2 (ENSNFUG00015000817) smim20 (ENSNFUG00015000856) #20 ENSNFUG00015000857 ENSNFUG00015000859 RBPJ (ENSNFUG00015000880) #22 CCKAR (ENSNFUG00015000941) #23 TBC1D19 (ENSNFUG00015000949) #24 ENSNFUG00015000962 ENSNFUG00015000964 ENSNFUG00015000968 ENSNFUG00015000969 ENSNFUG00015000971 PCDH7B (ENSNFUG00015000982) #28 ENSNFUG00015000990 NWD2 (ENSNFUG00015000999) RELL1 (ENSNFUG00015001013) per1b (ENSNFUG00015001033) pcolceb (ENSNFUG00015001053) OLA.1520 (ENSNFUG00015001067) ENSNFUG00015001074 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177834 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a Poeciliinae ANCESTRAL SPECIES 21 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177834 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 Poecilia ANCESTRAL SPECIES 32 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT00940000166316 NAME_6 ANCESTRAL SPECIES 53 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000157221.w.b #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Amazon molly MODERN SPECIES 293 ttc5 (ENSPFOG00000012975) mettl3 (ENSPFOG00000012920) tm4sf5 (ENSPFOG00000012879) ENSPFOG00000022655 zgc:103586 (ENSPFOG00000012848) fis1 (ENSPFOG00000012822) cldn15a (ENSPFOG00000012792) dnajc3b (ENSPFOG00000012678) naa38 (ENSPFOG00000012670) CHD3 (ENSPFOG00000012464) tnfsf12 (ENSPFOG00000012440) sat2a.2 (ENSPFOG00000012407) ENSPFOG00000012401 MAN2B2 (ENSPFOG00000012127) ENSPFOG00000024816 RBPJ (ENSPFOG00000012004) #22 CCKAR (ENSPFOG00000011947) #23 tbc1d19 (ENSPFOG00000011796) #24 STIM2 (ENSPFOG00000011706) #25 ENSPFOG00000024745 #28 PCDH7 (ENSPFOG00000011689) #28 ENSPFOG00000011485 ENSPFOG00000011416 NWD2 (ENSPFOG00000011365) ENSPFOG00000020015 RELL1 (ENSPFOG00000022963) per1b (ENSPFOG00000011185) pcolceb (ENSPFOG00000011106) ENSPFOG00000011090 ENSPFOG00000010952 cnpy4 (ENSPFOG00000010908) Sailfin molly MODERN SPECIES 1613 RBPJ (ENSPLAG00000015287) #22 CCKAR (ENSPLAG00000015339) #23 tbc1d19 (ENSPLAG00000015389) #24 STIM2 (ENSPLAG00000015406) #25 Guppy MODERN SPECIES 448 si:dkey-85k7.7 (ENSPREG00000010679) tm4sf5 (ENSPREG00000010687) ENSPREG00000010701 zgc:103586 (ENSPREG00000010715) fis1 (ENSPREG00000010749) cldn15a (ENSPREG00000010908) dnajc3b (ENSPREG00000010979) naa38 (ENSPREG00000011017) CHD3 (ENSPREG00000011044) tnfsf12 (ENSPREG00000011108) sat2a.2 (ENSPREG00000011128) ENSPREG00000011146 ENSPREG00000011156 MAN2B2 (ENSPREG00000011170) smim20 (ENSPREG00000011198) #20 RBPJ (ENSPREG00000011229) #22 CCKAR (ENSPREG00000011283) #23 tbc1d19 (ENSPREG00000011308) #24 STIM2 (ENSPREG00000011413) #25 PCDH7 (ENSPREG00000011447) #28 ENSPREG00000011489 ENSPREG00000011525 NWD2 (ENSPREG00000011567) ENSPREG00000011599 RELL1 (ENSPREG00000011610) per1b (ENSPREG00000011641) pcolceb (ENSPREG00000011709) ENSPREG00000011735 ENSPREG00000011778 cnpy4 (ENSPREG00000011908) ENSPREG00000011946 Platyfish MODERN SPECIES 5 zgc:103586 (ENSXMAG00000028038) fis1 (ENSXMAG00000029734) cldn15a (ENSXMAG00000010697) zgc:103586 (ENSXMAG00000021377) fis1 (ENSXMAG00000010702) dnajc3b (ENSXMAG00000010671) naa38 (ENSXMAG00000028369) CHD3 (ENSXMAG00000016035) ENSXMAG00000026617 tnfsf12 (ENSXMAG00000026597) sat2a.2 (ENSXMAG00000029129) ENSXMAG00000030071 ENSXMAG00000025997 MAN2B2 (ENSXMAG00000016108) smim20 (ENSXMAG00000026331) #20 RBPJ (ENSXMAG00000009877) #22 CCKAR (ENSXMAG00000029692) #23 tbc1d19 (ENSXMAG00000009908) #24 STIM2 (ENSXMAG00000000500) #25 PCDH7 (ENSXMAG00000009948) #28 ENSXMAG00000029363 ENSXMAG00000015280 ENSXMAG00000023755 DTHD1 (ENSXMAG00000015296) NWD2 (ENSXMAG00000029989) ENSXMAG00000015305 RELL1 (ENSXMAG00000015308) ENSXMAG00000026248 ENSXMAG00000030074 per1b (ENSXMAG00000015314) pcolceb (ENSXMAG00000027902) NAME_4 ANCESTRAL SPECIES 118 ENSGT00550000075058 ENSGT00940000176904 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 Sheepshead minnow MODERN SPECIES 669 mettl3 (ENSCVAG00000007436) si:dkey-85k7.7 (ENSCVAG00000007399) tm4sf5 (ENSCVAG00000007394) zgc:103586 (ENSCVAG00000007390) fis1 (ENSCVAG00000007367) cldn15a (ENSCVAG00000007350) dnajc3b (ENSCVAG00000007333) naa38 (ENSCVAG00000007301) CHD3 (ENSCVAG00000007293) tnfsf12 (ENSCVAG00000000196) sat2a.2 (ENSCVAG00000007020) ENSCVAG00000000192 ENSCVAG00000006997 MAN2B2 (ENSCVAG00000006984) smim20 (ENSCVAG00000006955) #20 RBPJ (ENSCVAG00000006950) #22 CCKAR (ENSCVAG00000006922) #23 Mummichog MODERN SPECIES 2242 tm4sf5 (ENSFHEG00000017145) zgc:103586 (ENSFHEG00000017104) fis1 (ENSFHEG00000017098) cldn15a (ENSFHEG00000017088) dnajc3b (ENSFHEG00000017081) naa38 (ENSFHEG00000017032) ENSFHEG00000017015 ENSFHEG00000017002 ENSFHEG00000016975 tnfsf12 (ENSFHEG00000016957) sat2a.2 (ENSFHEG00000016933) ENSFHEG00000016926 ENSFHEG00000016911 MAN2B2 (ENSFHEG00000000427) smim20 (ENSFHEG00000016834) #20 RBPJ (ENSFHEG00000016827) #22 CCKAR (ENSFHEG00000016778) #23 tbc1d19 (ENSFHEG00000016753) #24 STIM2 (ENSFHEG00000016700) #25 PCDH7 (ENSFHEG00000016689) #28 ENSFHEG00000016670 ENSFHEG00000016525 Tiger tail seahorse MODERN SPECIES 506 ecsit (ENSHCOG00000010406) EML3 (ENSHCOG00000010392) mta2 (ENSHCOG00000010372) cth1 (ENSHCOG00000010276) taf6l (ENSHCOG00000010268) fis1 (ENSHCOG00000010246) cldn15a (ENSHCOG00000010230) dnajc3b (ENSHCOG00000010223) naa38 (ENSHCOG00000010193) CHD3 (ENSHCOG00000010170) tnfsf12 (ENSHCOG00000010105) ENSHCOG00000010087 ENSHCOG00000010073 MAN2B2 (ENSHCOG00000010051) smim20 (ENSHCOG00000010007) #20 RBPJ (ENSHCOG00000009992) #22 CCKAR (ENSHCOG00000009933) #23 tbc1d19 (ENSHCOG00000000630) #24 zgc:77880 (ENSHCOG00000009864) stk26 (ENSHCOG00000009843) ENSHCOG00000009825 MAP3K11 (ENSHCOG00000009802) drap1 (ENSHCOG00000009796) zgc:63470 (ENSHCOG00000009790) rela (ENSHCOG00000009779) PPP1CB (ENSHCOG00000009767) SLC29A2 (ENSHCOG00000000638) ift57 (ENSHCOG00000009743) SORCS2 (ENSHCOG00000009730) s1pr5a (ENSHCOG00000009647) spc24 (ENSHCOG00000009636) Clupeocephala ANCESTRAL SPECIES 1078 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 Otomorpha ANCESTRAL SPECIES 392 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.w.a #28 ENSGT01030000234945 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 Otophysi ANCESTRAL SPECIES 161 ENSGT00940000159423 ENSGT00940000159570.b ENSGT00530000063812.C ENSGT00940000164745.i.b ENSGT00890000139482.a ENSGT00550000074944 ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.w.a #28 ENSGT01030000234945 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00940000158971 Characiphysae ANCESTRAL SPECIES 19 ENSGT00940000162428.n ENSGT00530000063506.B ENSGT00940000160134 ENSGT00940000155384.b.b ENSGT00390000002849 ENSGT00390000006227 ENSGT01030000234638.b.a.b ENSGT00940000159423 ENSGT00940000159570.b ENSGT00940000156784 ENSGT00530000063812.C ENSGT00940000164745.i.b ENSGT00890000139482.a ENSGT00550000074944 ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT01030000234945 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 Channel catfish MODERN SPECIES 26 zgc:194655 (ENSIPUG00000002701) CASP1 (ENSIPUG00000002683) oxa1l (ENSIPUG00000002671) slc7a7 (ENSIPUG00000002628) ccnb1ip1 (ENSIPUG00000002617) ttc5 (ENSIPUG00000002607) sall2 (ENSIPUG00000002559) man2b2 (ENSIPUG00000002536) acox3 (ENSIPUG00000002518) htra3 (ENSIPUG00000002495) ENSIPUG00000002483 sh3tc1 (ENSIPUG00000002458) tdrd7 (ENSIPUG00000002424) plaa (ENSIPUG00000002347) smim20 (ENSIPUG00000002330) #20 rbpj (ENSIPUG00000002240) #22 CCKAR (ENSIPUG00000002214) #23 tbc1d19 (ENSIPUG00000002172) #24 stim2 (ENSIPUG00000002157) #25 ENSIPUG00000002146 PCDH7 (ENSIPUG00000002132) #28 ENSIPUG00000002130 ENSIPUG00000002125 arap2 (ENSIPUG00000002086) DTHD1 (ENSIPUG00000002070) per1b (ENSIPUG00000002047) pcolce2 (ENSIPUG00000002037) PAQR9 (ENSIPUG00000002032) ENSIPUG00000001994 ENSIPUG00000001978 RWDD4 (ENSIPUG00000001932) Characiphysae_b ANCESTRAL SPECIES 18 ENSGT00940000162428.n ENSGT00530000063506.B ENSGT00940000160134 ENSGT00940000155384.b.b ENSGT00390000002849 ENSGT00390000006227 ENSGT01030000234638.b.a.b ENSGT00940000159423 ENSGT00940000159570.b ENSGT00940000156784 ENSGT00530000063812.C ENSGT00940000164745.i.b ENSGT00890000139482.a ENSGT00550000074944 ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000159709 Characoidei ANCESTRAL SPECIES 9 ENSGT01040000240385.A.b.b.b.a.a.a.c.b ENSGT00940000162428.n ENSGT00530000063506.B ENSGT00940000160134 ENSGT00940000155384.b.b ENSGT00390000002849 ENSGT00390000006227 ENSGT01030000234638.b.a.b ENSGT00940000159423 ENSGT00940000159570.b ENSGT00530000063812.C ENSGT00940000164745.i.b ENSGT00890000139482.a ENSGT00550000074944 ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00940000158971 ENSGT00390000015545 ENSGT00940000159709 Red-bellied piranha MODERN SPECIES 63 ENSPNAG00000012016 casp23 (ENSPNAG00000002053) oxa1l (ENSPNAG00000011975) slc7a7 (ENSPNAG00000011946) ENSPNAG00000006123 CCNB1IP1 (ENSPNAG00000001975) ttc5 (ENSPNAG00000001978) MAN2B2 (ENSPNAG00000011850) acox3 (ENSPNAG00000001940) HTRA3 (ENSPNAG00000011756) ENSPNAG00000001888 GTSF1 (ENSPNAG00000005737) tdrd7b (ENSPNAG00000011669) plaa (ENSPNAG00000011648) smim20 (ENSPNAG00000001820) #20 rbpjb (ENSPNAG00000011594) #22 CCKAR (ENSPNAG00000011557) #23 tbc1d19 (ENSPNAG00000011545) #24 STIM2 (ENSPNAG00000001745) #25 PCDH7 (ENSPNAG00000011447) #28 ENSPNAG00000001733 ENSPNAG00000011424 ENSPNAG00000006992 DTHD1 (ENSPNAG00000004807) per1b (ENSPNAG00000011346) pcolceb (ENSPNAG00000011299) PAQR9 (ENSPNAG00000011292) ENSPNAG00000011286 ENSPNAG00000011270 ENSPNAG00000001631 ENSPNAG00000011218 Mexicana tetra MODERN SPECIES 7 ENSAMXG00000031152 casp23 (ENSAMXG00000010996) oxa1l (ENSAMXG00000010987) slc7a7 (ENSAMXG00000010984) ENSAMXG00000010979 ttc5 (ENSAMXG00000010966) MAN2B2 (ENSAMXG00000010962) ENSAMXG00000010953 acox3 (ENSAMXG00000010946) HTRA3 (ENSAMXG00000010937) ENSAMXG00000010934 ENSAMXG00000036095 tdrd7b (ENSAMXG00000010917) plaa (ENSAMXG00000010868) smim20 (ENSAMXG00000031387) #20 rbpjb (ENSAMXG00000010835) #22 CCKAR (ENSAMXG00000041422) #23 tbc1d19 (ENSAMXG00000038746) #24 STIM2 (ENSAMXG00000010775) #25 ENSAMXG00000036373 ENSAMXG00000037910 ENSAMXG00000035407 PCDH7 (ENSAMXG00000018969) #28 ENSAMXG00000018865 DTHD1 (ENSAMXG00000018777) per1b (ENSAMXG00000018625) pcolceb (ENSAMXG00000018478) PAQR9 (ENSAMXG00000018419) ENSAMXG00000018304 ENSAMXG00000032118 ENSAMXG00000035055 Electric eel MODERN SPECIES 72 zgc:194655 (ENSEEEG00000020084) casp23 (ENSEEEG00000020083) oxa1l (ENSEEEG00000020019) slc7a7 (ENSEEEG00000019892) ENSEEEG00000019884 CCNB1IP1 (ENSEEEG00000019883) ttc5 (ENSEEEG00000019880) MAN2B2 (ENSEEEG00000019876) acox3 (ENSEEEG00000019745) HTRA3 (ENSEEEG00000019699) GTSF1 (ENSEEEG00000019693) ENSEEEG00000019688 tdrd7b (ENSEEEG00000019667) plaa (ENSEEEG00000019650) smim20 (ENSEEEG00000019643) #20 rbpjb (ENSEEEG00000019597) #22 CCKAR (ENSEEEG00000019594) #23 tbc1d19 (ENSEEEG00000019589) #24 STIM2 (ENSEEEG00000019390) #25 PCDH7 (ENSEEEG00000019378) #28 ENSEEEG00000019374 ENSEEEG00000019372 per1b (ENSEEEG00000019365) pcolceb (ENSEEEG00000019357) PAQR9 (ENSEEEG00000019356) ENSEEEG00000019354 ENSEEEG00000019353 ENSEEEG00000019352 ADAM33 (ENSEEEG00000019346) rwdd (ENSEEEG00000019343) rell1 (ENSEEEG00000019342) Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000165651.b ENSGT00900000141164.q.b ENSGT00940000153648.b ENSGT00980000199058 ENSGT00940000159709 ENSGT00390000015545 ENSGT00940000158971 ENSGT00940000166804 ENSGT00940000159423 ENSGT00940000159570.b ENSGT00530000063812.C ENSGT00940000164745.i.b ENSGT00890000139482.a ENSGT00550000074944 ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.w.a #28 ENSGT00940000157221.w.b #28 ENSGT00940000167169 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00940000158388.b ENSGT00940000157094 ENSGT00940000164076.a.a ENSGT00940000153991.a.a ENSGT00940000162034 ENSGT00940000160883.b ENSGT00940000165991 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 335 ENSGT00940000165651.b.c ENSGT00900000141164.q.b.b ENSGT00940000153648.b.k ENSGT00980000199058.a ENSGT00940000159709.b ENSGT00390000015545.b ENSGT00940000158971.bb.a ENSGT00940000166804.b ENSGT00940000159570.b.e ENSGT00530000063812.C.a ENSGT00890000139482.a.b ENSGT00550000074944.h ENSGT00390000002398.o.b #20 ENSGT00390000005197.a.cb.a #22 ENSGT01100000263563.c.b.b #23 ENSGT00390000015965.b #24 ENSGT00390000000214.a.b.k.c #25 ENSGT00940000157221.w.a #28 ENSGT00940000159217.c.a ENSGT00940000159264.f.e ENSGT00940000162334.a ENSGT00940000157094.y.a ENSGT00940000164076.a.a.a ENSGT00940000157678.d ENSGT00940000162034.b ENSGT00940000160883.b.b ENSGT00940000165991.q ENSGT00940000164592.c ENSGT00940000153284.a.mc.a.b Goldfish MODERN SPECIES 25 ca7 (ENSCARG00000005850) ENSCARG00000005865 rrad (ENSCARG00000005879) CIAO2B (ENSCARG00000005891) vstm2b (ENSCARG00000005938) NWD2 (ENSCARG00000005972) zgc:194930 (ENSCARG00000005988) rell1 (ENSCARG00000005991) ENSCARG00000006027 rwdd (ENSCARG00000006205) ENSCARG00000006281 HTRA3 (ENSCARG00000006395) ENSCARG00000006416 plaa (ENSCARG00000006465) smim20 (ENSCARG00000006708) #20 rbpjb (ENSCARG00000006750) #22 CCKAR (ENSCARG00000007033) #23 STIM2 (ENSCARG00000007210) #25 ENSCARG00000007892 PCDH7 (ENSCARG00000007897) #28 ENSCARG00000007906 ENSCARG00000007912 ENSCARG00000007914 kcnk5a (ENSCARG00000007921) ENSCARG00000007929 gnmt (ENSCARG00000007936) ENSCARG00000007943 cct7 (ENSCARG00000007967) ENSCARG00000008566 ENSCARG00000008571 ENSCARG00000008582 Cyprininae_a ANCESTRAL SPECIES 55 ENSGT00940000165651.b.c ENSGT00900000141164.q.b.b ENSGT00940000153648.b.k ENSGT00980000199058.a ENSGT00940000159709.b ENSGT00390000015545.b ENSGT00940000158971.bb.a ENSGT00940000166804.b ENSGT00940000159423.d ENSGT00940000159570.b.e ENSGT00530000063812.C.a ENSGT00890000139482.a.b ENSGT00550000074944.h ENSGT00390000002398.o.b #20 ENSGT00390000005197.a.cb.a #22 ENSGT01100000263563.c.b.b #23 ENSGT00390000015965.b #24 ENSGT00390000000214.a.b.k.c #25 ENSGT00940000157221.w.a #28 ENSGT00940000159217.c.a ENSGT00940000159264.f.e ENSGT00940000162334.a ENSGT00940000157094.y.a ENSGT00940000164076.a.a.a ENSGT00940000162034.b ENSGT00940000160883.b.b ENSGT00940000165991.q ENSGT00940000164592.c ENSGT00940000153284.a.mc.a.b ENSGT00940000153904.b.b Common carp reference MODERN SPECIES 6 ENSCCRG00000033281 ENSCCRG00000080783 zgc:194930 (ENSCCRG00000074853) rell1 (ENSCCRG00000060138) rwdd (ENSCCRG00000013450) ENSCCRG00000023192 ENSCCRG00000057090 acox3 (ENSCCRG00000077056) ENSCCRG00000080751 ENSCCRG00000065060 ENSCCRG00000058589 ENSCCRG00000067770 tdrd7b (ENSCCRG00000049209) plaa (ENSCCRG00000038774) smim20 (ENSCCRG00000021030) #20 rbpjb (ENSCCRG00000034784) #22 CCKAR (ENSCCRG00000002393) #23 tbc1d19 (ENSCCRG00000069511) #24 STIM2 (ENSCCRG00000034564) #25 PCDH7 (ENSCCRG00000068069) #28 ENSCCRG00000059886 ENSCCRG00000061451 ENSCCRG00000076759 ENSCCRG00000074811 ENSCCRG00000081820 per1b (ENSCCRG00000007240) pcolceb (ENSCCRG00000007231) ankrd46b (ENSCCRG00000019651) ENSCCRG00000022165 ENSCCRG00000057269 ENSCCRG00000024939 Golden-line barbel MODERN SPECIES 378 HTRA3 (ENSSGRG00000033872) ENSSGRG00000033873 ENSSGRG00000033874 tdrd7b (ENSSGRG00000033883) plaa (ENSSGRG00000034252) rbpjb (ENSSGRG00000034700) #22 CCKAR (ENSSGRG00000035387) #23 tbc1d19 (ENSSGRG00000035395) #24 STIM2 (ENSSGRG00000035647) #25 ENSSGRG00000035648 ENSSGRG00000035651 fgf12a (ENSSGRG00000035654) sst2 (ENSSGRG00000035665) Cyprininae ANCESTRAL SPECIES 451 ENSGT00940000165651.b.d ENSGT00900000141164.q.b.a ENSGT00940000153648.b.l ENSGT00980000199058.b ENSGT00940000159709.a ENSGT00390000015545.a ENSGT00940000158971.bb.b ENSGT00940000166804.a ENSGT00940000159423 ENSGT00940000159570.b.f ENSGT00940000164745.i.b ENSGT00530000063812.C.b ENSGT00890000139482.a.a ENSGT00550000074944.g ENSGT00390000002398.o.a #20 ENSGT00390000005197.a.cb.b #22 ENSGT01100000263563.c.b.a #23 ENSGT00390000015965.a #24 ENSGT00390000000214.a.b.k.d #25 Cyprininae_a ANCESTRAL SPECIES 128 ENSGT00940000165651.b.d ENSGT00900000141164.q.b.a ENSGT00940000153648.b.l ENSGT00980000199058.b ENSGT00940000159709.a ENSGT00390000015545.a ENSGT00940000158971.bb.b ENSGT00940000166804.a ENSGT00940000159423.c ENSGT00940000159570.b.f ENSGT00530000063812.C.b ENSGT00940000164745.i.b ENSGT00890000139482.a.a ENSGT00550000074944.g ENSGT00390000002398.o.a #20 ENSGT00390000005197.a.cb.b #22 ENSGT01100000263563.c.b.a #23 ENSGT00390000015965.a #24 ENSGT00390000000214.a.b.k.d #25 ENSGT00940000157221.w.b #28 ENSGT00940000167169.e ENSGT00940000159217.c.b ENSGT00940000159264.f.f ENSGT00940000162334.b ENSGT00940000157094.y.b ENSGT00940000164076.a.a.b ENSGT00940000153991.a.a.ab ENSGT00940000162034.a ENSGT00940000160883.b.a ENSGT00940000165991.r ENSGT00940000164592.d Common carp reference MODERN SPECIES ENSCCRG00000011945 ENSCCRG00000077528 ENSCCRG00000043785 zgc:194930 (ENSCCRG00000043795) rell1 (ENSCCRG00000013452) rwdd (ENSCCRG00000060629) ENSCCRG00000041162 ENSCCRG00000050128 acox3 (ENSCCRG00000074050) ENSCCRG00000069242 ENSCCRG00000060694 ENSCCRG00000035054 tdrd7b (ENSCCRG00000035428) plaa (ENSCCRG00000021039) smim20 (ENSCCRG00000043202) #20 rbpjb (ENSCCRG00000072958) #22 CCKAR (ENSCCRG00000034676) #23 tbc1d19 (ENSCCRG00000016172) #24 STIM2 (ENSCCRG00000067311) #25 ENSCCRG00000058270 ENSCCRG00000081695 PCDH7 (ENSCCRG00000078409) #28 ENSCCRG00000025510 per1b (ENSCCRG00000025395) pcolceb (ENSCCRG00000025382) ankrd46b (ENSCCRG00000025376) ENSCCRG00000061144 ENSCCRG00000054488 ENSCCRG00000073908 ENSCCRG00000024928 gc2 (ENSCCRG00000042447) Golden-line barbel MODERN SPECIES 239 mta2 (ENSSGRG00000041824) EML3 (ENSSGRG00000038244) ecsit (ENSSGRG00000038194) ENSSGRG00000038191 rtn3 (ENSSGRG00000038187) men1 (ENSSGRG00000038186) map4k2 (ENSSGRG00000037985) ENSSGRG00000037971 ENSSGRG00000037959 acox3 (ENSSGRG00000037923) ENSSGRG00000037922 ENSSGRG00000037921 tdrd7b (ENSSGRG00000037920) plaa (ENSSGRG00000037756) smim20 (ENSSGRG00000037754) #20 rbpjb (ENSSGRG00000037494) #22 CCKAR (ENSSGRG00000037476) #23 tbc1d19 (ENSSGRG00000037388) #24 STIM2 (ENSSGRG00000037192) #25 Goldfish MODERN SPECIES 47 ENSCARG00000055066 ENSCARG00000055054 NWD2 (ENSCARG00000055026) zgc:194930 (ENSCARG00000055020) rell1 (ENSCARG00000055003) rwdd (ENSCARG00000054969) ENSCARG00000054880 ENSCARG00000054861 acox3 (ENSCARG00000054523) HTRA3 (ENSCARG00000054482) ENSCARG00000054469 ENSCARG00000054433 tdrd7b (ENSCARG00000052803) plaa (ENSCARG00000052216) smim20 (ENSCARG00000052191) #20 rbpjb (ENSCARG00000051741) #22 CCKAR (ENSCARG00000051700) #23 tbc1d19 (ENSCARG00000051474) #24 STIM2 (ENSCARG00000050186) #25 ENSCARG00000050142 ENSCARG00000050121 ENSCARG00000050117 ENSCARG00000050101 ENSCARG00000050046 ENSCARG00000050025 ENSCARG00000050010 ENSCARG00000049982 ENSCARG00000049974 ENSCARG00000049963 znf219 (ENSCARG00000049945) ENSCARG00000049897 Zebrafish MODERN SPECIES 22 pcxb (ENSDARG00000051939) ENSDARG00000078078 NWD2 (ENSDARG00000077162) zgc:194930 (ENSDARG00000079584) rell1 (ENSDARG00000018312) rwdd (ENSDARG00000068256) ENSDARG00000059693 ENSDARG00000068258 acox3 (ENSDARG00000038865) HTRA3 (ENSDARG00000010925) ENSDARG00000077330 ENSDARG00000099586 tdrd7b (ENSDARG00000077523) plaa (ENSDARG00000042728) smim20 (ENSDARG00000112670) #20 rbpjb (ENSDARG00000052091) #22 CCKAR (ENSDARG00000052089) #23 tbc1d19 (ENSDARG00000013842) #24 STIM2 (ENSDARG00000001776) #25 PCDH7 (ENSDARG00000060610) #28 ENSDARG00000094805 ENSDARG00000101994 ENSDARG00000100518 zdhhc21 (ENSDARG00000110709) ENSDARG00000074782 sinhcafl (ENSDARG00000078118) DENND5A (ENSDARG00000017006) tmem41b (ENSDARG00000080006) ipo7 (ENSDARG00000035751) ENSDARG00000105344 bco1l (ENSDARG00000103659) Euteleosteomorpha ANCESTRAL SPECIES 833 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 Acanthomorphata ANCESTRAL SPECIES 50 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00440000037582 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00970000198440 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00980000199058 ENSGT00940000159709 ENSGT00940000159217 Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00440000037582 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b Pinecone sodierfish MODERN SPECIES 9 ENSMMDG00005012563 tm4sf5 (ENSMMDG00005012564) zgc:103586 (ENSMMDG00005012626) fis1 (ENSMMDG00005012639) cldn15a (ENSMMDG00005012642) dnajc3b (ENSMMDG00005012648) naa38 (ENSMMDG00005012831) cyb5d1 (ENSMMDG00005012834) CHD3 (ENSMMDG00005012922) tnfsf12 (ENSMMDG00005015565) sat2a.2 (ENSMMDG00005015566) ENSMMDG00005015569 ENSMMDG00005015571 MAN2B2 (ENSMMDG00005015578) smim20 (ENSMMDG00005015589) #20 rbpjb (ENSMMDG00005015594) #22 CCKAR (ENSMMDG00005015984) #23 tbc1d19 (ENSMMDG00005015988) #24 STIM2 (ENSMMDG00005015995) #25 PCDH7 (ENSMMDG00005016272) #28 ENSMMDG00005016277 DTHD1 (ENSMMDG00005016470) NWD2 (ENSMMDG00005016473) ENSMMDG00005016476 rell1 (ENSMMDG00005016478) per1b (ENSMMDG00005016500) pcolceb (ENSMMDG00005016990) ENSMMDG00005017038 ENSMMDG00005017042 cnpy4 (ENSMMDG00005017126) ENSMMDG00005017128 Percomorphaceae ANCESTRAL SPECIES 18 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f Percomorphaceae_C ANCESTRAL SPECIES ENSGT00390000005197.a.cb #22 Eupercaria ANCESTRAL SPECIES ENSGT00390000005197.a.cb #22 Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00390000002849 ENSGT00390000006227 ENSGT00550000075058 ENSGT01030000234590.B.a.b ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B Fugu MODERN SPECIES 20 CCNB1IP1 (ENSTRUG00000022746) ttc5 (ENSTRUG00000015399) mettl3 (ENSTRUG00000015365) tm4sf5 (ENSTRUG00000015352) zgc:103586 (ENSTRUG00000015344) fis1 (ENSTRUG00000028230) cldn15a (ENSTRUG00000015308) dnajc3b (ENSTRUG00000015269) naa38 (ENSTRUG00000026123) CHD3 (ENSTRUG00000014990) tnfsf12 (ENSTRUG00000014986) sat2a.2 (ENSTRUG00000014957) ENSTRUG00000019816 MAN2B2 (ENSTRUG00000025905) smim20 (ENSTRUG00000025116) #20 rbpjb (ENSTRUG00000014707) #22 CCKAR (ENSTRUG00000014776) #23 STIM2 (ENSTRUG00000014691) #25 PCDH7 (ENSTRUG00000014668) #28 ENSTRUG00000014635 ENSTRUG00000014629 NWD2 (ENSTRUG00000014613) ENSTRUG00000021077 rell1 (ENSTRUG00000022108) per1b (ENSTRUG00000014420) pcolceb (ENSTRUG00000014354) ENSTRUG00000028673 ENSTRUG00000014351 cnpy4 (ENSTRUG00000014142) ENSTRUG00000014066 ENSTRUG00000027326 Ovalentaria ANCESTRAL SPECIES 20 ENSGT00940000175475 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00940000174987 ENSGT00940000177623 ENSGT00390000005197.a.bb.b #22 ENSGT01100000263518.C ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT01010000222552 ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a Aplocheiloidei ANCESTRAL SPECIES 68 ENSGT00940000167107 ENSGT00390000000592 ENSGT00940000165100.b ENSGT00940000165987 ENSGT00390000018418 ENSGT00940000158001 ENSGT00940000177727 ENSGT00510000050706 ENSGT00950000183121.a.c.b ENSGT00800000125278 ENSGT00650000094881 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.bb.b #22 ENSGT00980000201267 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153648.b ENSGT00940000159709 ENSGT00940000159217 ENSGT00940000159264.f ENSGT00940000165960.b ENSGT00940000156128.a ENSGT00390000014072.B ENSGT01030000234567.B.a.b.a.a ENSGT00940000166316 ENSGT00940000153491.b.b.b ENSGT00940000163927.a.a Mangrove rivulus MODERN SPECIES 295 tm4sf5 (ENSKMAG00000019557) ENSKMAG00000019553 zgc:103586 (ENSKMAG00000019540) fis1 (ENSKMAG00000019524) cldn15a (ENSKMAG00000019515) dnajc3b (ENSKMAG00000019474) naa38 (ENSKMAG00000019461) CHD3 (ENSKMAG00000019292) tnfsf12 (ENSKMAG00000019230) sat2a.2 (ENSKMAG00000019214) ENSKMAG00000019194 ENSKMAG00000019182 smim20 (ENSKMAG00000019171) #20 MAN2B2 (ENSKMAG00000019095) ENSKMAG00000019073 RBPJ (ENSKMAG00000019039) #22 CCKAR (ENSKMAG00000019006) #23 tbc1d19 (ENSKMAG00000018944) #24 Oryzias ANCESTRAL SPECIES ENSGT00390000005197.a.cb #22 Oryzias_a ANCESTRAL SPECIES ENSGT00390000005197.a.cb #22 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 2490 ENSOSIG00000012977 #22 Chinese medaka MODERN SPECIES 941 CCNB1IP1 (ENSOSIG00000014346) ENSOSIG00000014348 ttc5 (ENSOSIG00000014349) mettl3 (ENSOSIG00000014351) ENSOSIG00000014402 fis1 (ENSOSIG00000014404) cldn15a (ENSOSIG00000014405) dnajc3b (ENSOSIG00000014409) naa38 (ENSOSIG00000015879) CHD3 (ENSOSIG00000015892) tnfsf12 (ENSOSIG00000016550) sat2a.2 (ENSOSIG00000016552) ENSOSIG00000016561 ENSOSIG00000016562 MAN2B2 (ENSOSIG00000016566) ENSOSIG00000016632 #22 CCKAR (ENSOSIG00000016633) #23 tbc1d19 (ENSOSIG00000016637) #24 STIM2 (ENSOSIG00000016653) #25 ENSOSIG00000017002 Protacanthopterygii ANCESTRAL SPECIES 57 ENSGT00950000182850.a.b.a.a.b ENSGT00390000012556 #14 ENSGT00950000182850.a.b.a.a.a ENSGT00950000183067.a.a ENSGT01030000234563.b.a.a ENSGT00390000005589.a.a ENSGT00940000157318 ENSGT00940000154521.A ENSGT01100000263482.F ENSGT00940000157250 ENSGT00390000018549 ENSGT00940000162871 ENSGT00940000177059 ENSGT01030000234638.b.a.b ENSGT00390000002398 #20 ENSGT00390000005197.a.cb #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k #25 ENSGT00940000157221.x #28 ENSGT00940000167169 ENSGT00940000153404.b ENSGT00940000153648.b ENSGT00990000208579 ENSGT00940000159709 ENSGT00940000159264.f ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804 ENSGT00970000193685 Northern pike MODERN SPECIES 23 zcchc4 (ENSELUG00000011763) #14 ABLIM2 (ENSELUG00000011712) AFAP1 (ENSELUG00000011506) ENSELUG00000028395 hsd11b1la (ENSELUG00000011379) SORCS2 (ENSELUG00000011332) grpel1 (ENSELUG00000011256) tada2b (ENSELUG00000011240) ccdc96 (ENSELUG00000031533) TBC1D14 (ENSELUG00000011194) kiaa0232 (ENSELUG00000011174) s100p (ENSELUG00000011155) ENSELUG00000011060 MAN2B2 (ENSELUG00000011118) smim20 (ENSELUG00000031844) #20 rbpjb (ENSELUG00000011029) #22 CCKAR (ENSELUG00000001082) #23 tbc1d19 (ENSELUG00000010951) #24 STIM2 (ENSELUG00000010866) #25 ENSELUG00000034124 ENSELUG00000010753 PCDH7 (ENSELUG00000010732) #28 ENSELUG00000024789 ENSELUG00000000384 DTHD1 (ENSELUG00000010593) NWD2 (ENSELUG00000010572) ENSELUG00000032348 rell1 (ENSELUG00000010541) per1b (ENSELUG00000000378) pcolceb (ENSELUG00000010467) PAQR9 (ENSELUG00000010428) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 336 ENSGT01100000263495.E.m.b.b ENSGT00940000155279.C.a.a.m.a.a.a ENSGT00940000155150.a.b ENSGT00940000159954.a ENSGT00940000153395.a.i ENSGT00940000155475.h.i ENSGT00390000012556.c #14 ENSGT00950000182850.a.b.a.a.a.a ENSGT00950000183067.a.a.g ENSGT01030000234563.b.a.a.k ENSGT00390000005589.a.a.x ENSGT00940000157318.b ENSGT01100000263482.F ENSGT00940000157250.e ENSGT00390000018549.k ENSGT00390000005197.a.cb.e.a #22 ENSGT01100000263563.c.b.c #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k.a #25 ENSGT00940000157221.x.i.b #28 Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00940000155150.a.b ENSGT00940000155279.C.a.a.m.a.b ENSGT00940000159769.a.a.w.b ENSGT00940000159954.a ENSGT00940000153395.a.i ENSGT00940000155475.h.i ENSGT00390000012556.c #14 ENSGT00950000182850.a.b.a.a.a.a ENSGT00950000183067.a.a.g ENSGT01030000234563.b.a.a.k ENSGT00390000005589.a.a.x ENSGT00940000157318.b ENSGT00990000210738.b ENSGT00940000157250.e ENSGT00390000018549.k ENSGT00390000005197.a.cb.e.a #22 ENSGT01100000263563.c.b.c #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k.a #25 ENSGT00940000157221.x.i.b #28 ENSGT00940000153648.b.n ENSGT00990000208579.b ENSGT00980000201372 ENSGT00940000158194.o ENSGT00600000085600.l ENSGT00390000013368 ENSGT00510000047760.a ENSGT00390000001189.b.i.d ENSGT00390000007332.f #11 ENSGT01030000234532.B.e.a.a.a.b.d ENSGT00390000008294.q.a.b Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00940000155279.C.a.a.m.a.a.a ENSGT00940000155150.a.b ENSGT00940000159769.a.a.w.b ENSGT00940000159954.a ENSGT00940000153395.a.i ENSGT00940000155475.h.i ENSGT00390000012556.c #14 ENSGT00950000182850.a.b.a.a.a.a ENSGT00950000183067.a.a.g ENSGT01030000234563.b.a.a.k ENSGT00390000005589.a.a.x ENSGT00940000157318.b ENSGT00990000210738.b ENSGT00940000157250.e ENSGT00390000018549.k ENSGT00390000005197.a.cb.e.a #22 ENSGT01100000263563.c.b.c #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k.a #25 ENSGT01000000220453.A ENSGT00940000157221.x.i.b #28 ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.a.a.b.b ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.b.a ENSGT00940000153648.b.n ENSGT00990000208579.b ENSGT00980000201372 ENSGT00940000158194.o ENSGT00600000085600.l ENSGT00390000013368 ENSGT00510000047760.a ENSGT00390000001189.b.i.d Rainbow trout MODERN SPECIES 30 ENSOMYG00000003978 ENSOMYG00000005554 ENSOMYG00000052362 ENSOMYG00000071329 pde5ab (ENSOMYG00000007783) ENSOMYG00000009006 #14 ABLIM2 (ENSOMYG00000009018) AFAP1 (ENSOMYG00000076559) SORCS2 (ENSOMYG00000009185) grpel1 (ENSOMYG00000059030) tada2b (ENSOMYG00000009315) ENSOMYG00000076871 TBC1D14 (ENSOMYG00000009692) kiaa0232 (ENSOMYG00000010844) ENSOMYG00000010848 rbpjb (ENSOMYG00000010928) #22 CCKAR (ENSOMYG00000011008) #23 tbc1d19 (ENSOMYG00000011076) #24 STIM2 (ENSOMYG00000011343) #25 ENSOMYG00000072475 ENSOMYG00000011485 PCDH7 (ENSOMYG00000011494) #28 ENSOMYG00000058912 ENSOMYG00000011633 ENSOMYG00000064043 ENSOMYG00000055976 ENSOMYG00000039844 ENSOMYG00000011652 NWD2 (ENSOMYG00000011663) ENSOMYG00000011682 ENSOMYG00000072923 Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00940000155279.C.a.a.m.a.a.a ENSGT00940000155150.a.b ENSGT00940000159769.a.a.w.b ENSGT00940000159954.a ENSGT00940000153395.a.i ENSGT00940000155475.h.i ENSGT00390000012556.c #14 ENSGT00950000182850.a.b.a.a.a.a ENSGT00950000183067.a.a.g ENSGT01030000234563.b.a.a.k ENSGT00390000005589.a.a.x ENSGT00940000157318.b ENSGT00990000210738.b ENSGT00940000157250.e ENSGT00390000018549.k ENSGT00390000005197.a.cb.e.a #22 ENSGT01100000263563.c.b.c #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k.a #25 ENSGT01000000220453.A ENSGT00940000157221.x.i.b #28 ENSGT00940000153582.a.m.a.a.b.b.b.a.b.a.a.b.a.a.a.a.b.b ENSGT00940000153582.a.m.a.a.b.b.b.a.a.b.a.b.a ENSGT00940000153648.b.n ENSGT00990000208579.b ENSGT00940000158194.o ENSGT00600000085600.l ENSGT00390000013368 ENSGT00510000047760.a ENSGT00390000001189.b.i.d ENSGT00390000007332.f #11 Coho salmon MODERN SPECIES 7 ENSOKIG00005038578 ENSOKIG00005038607 znf16l (ENSOKIG00005038813) ENSOKIG00005039598 ARSJ (ENSOKIG00005040154) MAD2L1 (ENSOKIG00005040164) pde5ab (ENSOKIG00005040433) ABLIM2 (ENSOKIG00005043756) zcchc4 (ENSOKIG00005043797) #14 AFAP1 (ENSOKIG00005043840) SORCS2 (ENSOKIG00005043962) GRPEL1 (ENSOKIG00005044114) tada2b (ENSOKIG00005044130) TBC1D14 (ENSOKIG00005044210) KIAA0232 (ENSOKIG00005044699) rbpjb (ENSOKIG00005044732) #22 CCKAR (ENSOKIG00005044891) #23 tbc1d19 (ENSOKIG00005044905) #24 STIM2 (ENSOKIG00005044980) #25 ENSOKIG00005045149 ENSOKIG00005045153 ENSOKIG00005045158 ENSOKIG00005045163 ENSOKIG00005045168 PCDH7 (ENSOKIG00005045176) #28 ENSOKIG00005045188 ENSOKIG00005045203 ENSOKIG00005045216 ENSOKIG00005045227 NWD2 (ENSOKIG00005045236) ING2 (ENSOKIG00005045246) Chinook salmon MODERN SPECIES 1 znf16l (ENSOTSG00005017512) ANK2 (ENSOTSG00005017559) camk2d1 (ENSOTSG00005032430) mad2l1 (ENSOTSG00005032959) pde5ab (ENSOTSG00005032979) zcchc4 (ENSOTSG00005033936) #14 ABLIM2 (ENSOTSG00005033937) AFAP1 (ENSOTSG00005033946) SORCS2 (ENSOTSG00005033948) grpel1 (ENSOTSG00005033954) tada2b (ENSOTSG00005033957) ENSOTSG00005033959 TBC1D14 (ENSOTSG00005033971) ENSOTSG00005000732 kiaa0232 (ENSOTSG00005001061) rbpjb (ENSOTSG00005001100) #22 CCKAR (ENSOTSG00005001452) #23 tbc1d19 (ENSOTSG00005001461) #24 STIM2 (ENSOTSG00005001632) #25 ENSOTSG00005001636 PCDH7 (ENSOTSG00005001637) #28 ENSOTSG00005001641 ENSOTSG00005001643 ENSOTSG00005001644 ENSOTSG00005001647 NWD2 (ENSOTSG00005001652) ENSOTSG00005001649 ing2 (ENSOTSG00005001653) ENSOTSG00005001654 slx1b (ENSOTSG00005001656) zgc:112271 (ENSOTSG00005001657) Salmo ANCESTRAL SPECIES 18 ENSGT01100000263495.E.m.b.b ENSGT00940000159769.a.a.w.b ENSGT00940000159954.a ENSGT00940000153395.a.i ENSGT00940000155475.h.i ENSGT00390000012556.c #14 ENSGT00950000182850.a.b.a.a.a.a ENSGT00950000183067.a.a.g ENSGT01030000234563.b.a.a.k ENSGT00390000005589.a.a.x ENSGT00940000157318.b ENSGT00990000210738.b ENSGT00940000157250.e ENSGT00390000018549.k ENSGT00390000018895.a.m.a ENSGT00390000005197.a.cb.e.a #22 ENSGT01100000263563.c.b.c #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b.k.a #25 ENSGT00990000211390 ENSGT00940000157221.x.i.b #28 ENSGT00940000165320 ENSGT00940000159817.jb.b ENSGT00940000157424.m.b.b ENSGT00510000047611.ub ENSGT00390000012961.o ENSGT00940000161147.c ENSGT00940000156576.g ENSGT00950000183144.A ENSGT00390000000938.mb ENSGT00940000161220 Atlantic salmon MODERN SPECIES 9 ENSSSAG00000081908 pde5ab (ENSSSAG00000061144) zcchc4 (ENSSSAG00000087227) #14 ABLIM2 (ENSSSAG00000060413) ENSSSAG00000083801 AFAP1 (ENSSSAG00000060218) SORCS2 (ENSSSAG00000049497) GRPEL1 (ENSSSAG00000049102) tada2b (ENSSSAG00000086629) ENSSSAG00000049074 TBC1D14 (ENSSSAG00000043970) KIAA0232 (ENSSSAG00000043817) ENSSSAG00000092477 ENSSSAG00000043781 ENSSSAG00000083639 rbpjb (ENSSSAG00000041441) #22 CCKAR (ENSSSAG00000088509) #23 tbc1d19 (ENSSSAG00000041126) #24 STIM2 (ENSSSAG00000003054) #25 ENSSSAG00000103714 ENSSSAG00000040796 PCDH7 (ENSSSAG00000040782) #28 ENSSSAG00000084771 ENSSSAG00000101180 ENSSSAG00000108518 ENSSSAG00000004372 ENSSSAG00000006734 ENSSSAG00000002163 NWD2 (ENSSSAG00000093983) ENSSSAG00000040871 ENSSSAG00000095767 River trout MODERN SPECIES 35 ENSSTUG00000032175 ARSJ (ENSSTUG00000032060) mad2l1 (ENSSTUG00000032049) pde5ab (ENSSTUG00000031450) zcchc4 (ENSSTUG00000031388) #14 ABLIM2 (ENSSTUG00000030413) AFAP1 (ENSSTUG00000030368) ENSSTUG00000030361 SORCS2 (ENSSTUG00000029672) grpel1 (ENSSTUG00000029638) tada2b (ENSSTUG00000029631) ENSSTUG00000029612 TBC1D14 (ENSSTUG00000027130) kiaa0232 (ENSSTUG00000027072) ENSSTUG00000027066 rbpjb (ENSSTUG00000026772) #22 CCKAR (ENSSTUG00000050267) #23 tbc1d19 (ENSSTUG00000050255) #24 STIM2 (ENSSTUG00000050244) #25 ENSSTUG00000050236 PCDH7 (ENSSTUG00000050235) #28 ENSSTUG00000050232 NWD2 (ENSSTUG00000050231) ENSSTUG00000050228 ENSSTUG00000050227 ENSSTUG00000050225 ing2 (ENSSTUG00000050221) ENSSTUG00000050219 slx1b (ENSSTUG00000050214) zgc:112271 (ENSSTUG00000050210) COL25A1 (ENSSTUG00000050163) Huchen MODERN SPECIES 313 grpel1 (ENSHHUG00000033290) tada2b (ENSHHUG00000033293) ENSHHUG00000033296 TBC1D14 (ENSHHUG00000033306) kiaa0232 (ENSHHUG00000033456) ENSHHUG00000033464 ENSHHUG00000033466 rbpjb (ENSHHUG00000033473) #22 CCKAR (ENSHHUG00000033512) #23 tbc1d19 (ENSHHUG00000033554) #24 STIM2 (ENSHHUG00000033590) #25 Salmoninae ANCESTRAL SPECIES 189 ENSGT01030000234563.b.a.a.l.a ENSGT00390000005589.a.a.w ENSGT00940000157318.a ENSGT00940000154521.A ENSGT01030000234940.g ENSGT00990000210738 ENSGT00940000157250.f ENSGT00390000018549.l ENSGT00940000162871 ENSGT00940000177059 ENSGT01030000234638.b.a.b.c ENSGT00390000002398 #20 ENSGT00390000005197.a.cb.e.b #22 ENSGT01100000263563.c.b.d #23 ENSGT00390000000214.a.b.k.b #25 ENSGT00970000198440 ENSGT00940000157221.x.i.a #28 ENSGT00940000167169.d ENSGT00940000153648.b.m ENSGT00990000208579.a ENSGT00940000159709 ENSGT00940000159217.n ENSGT00940000159264.f.c.a ENSGT00940000159264.f.d ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804.d Salmoninae_a ANCESTRAL SPECIES 101 ENSGT00940000157318.a ENSGT00940000154521.A ENSGT01030000234940.g ENSGT00940000162710.c.a.c.a ENSGT00940000163421.a.d.a.b.a ENSGT00940000163421.a.d.a.b.b ENSGT00940000159150.ab ENSGT00940000155010.a ENSGT01100000263482.F ENSGT00940000157250.f ENSGT00390000018549.l ENSGT00940000162871 ENSGT00940000177059.a ENSGT01030000234638.b.a.b.c ENSGT00390000002398 #20 ENSGT00390000005197.a.cb.e.b #22 ENSGT01100000263563.c.b.d #23 ENSGT00390000000214.a.b.k.b #25 ENSGT01100000263473.a.b.h.b.k.a ENSGT00940000157221.x.i.a #28 ENSGT00940000167169.d ENSGT00940000153648.b.m ENSGT00990000208579.a ENSGT00940000159709 ENSGT00940000159217.n ENSGT00940000159264.f.c.a ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804.d ENSGT00940000158971 Salmo ANCESTRAL SPECIES 49 ENSGT00940000156431.u ENSGT00390000006293.t.b ENSGT00940000156938.e.g.b ENSGT00940000163421.a.d.a.a.f.a.a.b ENSGT00940000166375.h ENSGT00940000163421.a.d.a.a.f.b ENSGT00940000159150.ab ENSGT00940000155010.a ENSGT01100000263482.F ENSGT00940000157250.f ENSGT00390000018549.l ENSGT00940000162871 ENSGT00940000177059.a ENSGT01030000234638.b.a.b.c ENSGT00390000002398 #20 ENSGT00390000005197.a.cb.e.b #22 ENSGT01100000263563.c.b.d #23 ENSGT00390000000214.a.b.k.b #25 ENSGT01100000263473.a.b.h.b.k.b.a.b.a ENSGT01100000263473.a.b.h.b.k.a ENSGT00940000157221.x.i.a #28 ENSGT00940000167169.d ENSGT00940000153648.b.m ENSGT00990000208579.a ENSGT00940000159709 ENSGT00940000159217.n ENSGT00940000159264.f.c.a ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT01030000235360 River trout MODERN SPECIES 38 SORCS2 (ENSSTUG00000005480) grpel1 (ENSSTUG00000005439) tada2b (ENSSTUG00000005427) ccdc96 (ENSSTUG00000005424) ENSSTUG00000005406 ENSSTUG00000005370 ENSSTUG00000005355 TBC1D14 (ENSSTUG00000003515) kiaa0232 (ENSSTUG00000003427) S100P (ENSSTUG00000003417) ENSSTUG00000003406 MAN2B2 (ENSSTUG00000003373) ENSSTUG00000003357 MAN2B2 (ENSSTUG00000002807) smim20 (ENSSTUG00000002761) #20 rbpjb (ENSSTUG00000002520) #22 CCKAR (ENSSTUG00000002506) #23 ENSSTUG00000002494 STIM2 (ENSSTUG00000002272) #25 ENSSTUG00000002257 ENSSTUG00000002240 ENSSTUG00000002239 ENSSTUG00000002236 ENSSTUG00000002227 ENSSTUG00000002176 PCDH7 (ENSSTUG00000002164) #28 ENSSTUG00000002154 ENSSTUG00000002153 ENSSTUG00000001897 NWD2 (ENSSTUG00000001854) ENSSTUG00000001833 Atlantic salmon MODERN SPECIES 26 grpel1 (ENSSSAG00000116289) tada2b (ENSSSAG00000119094) ENSSSAG00000089298 ccdc96 (ENSSSAG00000005913) ENSSSAG00000059975 ENSSSAG00000062059 ENSSSAG00000005906 ENSSSAG00000014842 ENSSSAG00000003774 tbc1d14 (ENSSSAG00000003821) kiaa0232 (ENSSSAG00000004682) s100p (ENSSSAG00000004690) man2b2 (ENSSSAG00000004837) smim20 (ENSSSAG00000005897) #20 CCKAR (ENSSSAG00000003097) #23 ENSSSAG00000003166 #22 STIM2 (ENSSSAG00000040955) #25 ENSSSAG00000100672 ENSSSAG00000056676 ENSSSAG00000056685 ENSSSAG00000003042 ENSSSAG00000003074 ENSSSAG00000082471 ENSSSAG00000115209 ENSSSAG00000114796 ENSSSAG00000090682 ENSSSAG00000113718 PCDH7 (ENSSSAG00000003088) #28 ENSSSAG00000092620 ENSSSAG00000111088 NWD2 (ENSSSAG00000002877) Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00940000157318.a ENSGT00940000154521.A ENSGT01030000234940.g ENSGT00940000162710.c.a.c.a ENSGT00940000163421.a.d.a.b.a ENSGT00940000163421.a.d.a.b.b.b ENSGT00940000159150.ab.e ENSGT00940000155010.a ENSGT01100000263482.F ENSGT00940000157250.f ENSGT00390000018549.l ENSGT00940000162871 ENSGT00940000177059.a ENSGT01030000234638.b.a.b.c ENSGT00390000002398 #20 ENSGT00390000005197.a.cb.e.b #22 ENSGT01100000263563.c.b.d #23 ENSGT00390000000214.a.b.k.b #25 ENSGT00940000153648.b.m ENSGT00990000208579.a ENSGT00940000159709 ENSGT00940000159217.n ENSGT00940000159264.f.d ENSGT00940000162334 ENSGT00390000000527 ENSGT00390000017455 ENSGT00940000166804.d ENSGT00940000158971 ENSGT01090000260859.b ENSGT00390000015545 ENSGT00940000167021 Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT01030000234563.b.a.a.l.a ENSGT00390000005589.a.a.w ENSGT00940000157318.a ENSGT00940000154521.A ENSGT01030000234940.g ENSGT00940000162710.c.a.c.a ENSGT00940000163421.a.d.a.b.b.b ENSGT00940000159150.ab.e ENSGT00940000155010.a ENSGT01100000263482.F ENSGT00940000157250.f ENSGT00390000018549.l ENSGT00940000162871 ENSGT01030000234638.b.a.b.c ENSGT00390000002398 #20 ENSGT00390000005197.a.cb.e.b #22 ENSGT01100000263563.c.b.d #23 ENSGT00390000000214.a.b.k.b #25 Coho salmon MODERN SPECIES 29 AFAP1 (ENSOKIG00005024960) SORCS2 (ENSOKIG00005025020) grpel1 (ENSOKIG00005025162) tada2b (ENSOKIG00005025191) ccdc96 (ENSOKIG00005025208) ENSOKIG00005025215 ENSOKIG00005025275 ENSOKIG00005025498 TBC1D14 (ENSOKIG00005025524) kiaa0232 (ENSOKIG00005025740) S100P (ENSOKIG00005025743) ENSOKIG00005025758 MAN2B2 (ENSOKIG00005025814) ENSOKIG00005026694 smim20 (ENSOKIG00005026709) #20 rbpjb (ENSOKIG00005026727) #22 CCKAR (ENSOKIG00005026800) #23 STIM2 (ENSOKIG00005026826) #25 ENSOKIG00005026882 ENSOKIG00005026896 ENSOKIG00005026916 ENSOKIG00005026929 PCDH7 (ENSOKIG00005026956) #28 ENSOKIG00005027006 ENSOKIG00005027014 ENSOKIG00005027016 ENSOKIG00005027027 ENSOKIG00005027038 ENSOKIG00005027054 NWD2 (ENSOKIG00005027071) ENSOKIG00005027094 Huchen MODERN SPECIES 5094 ENSHHUG00000051311 #22 CCKAR (ENSHHUG00000051309) #23 Salmoninae ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f #22 Huchen MODERN SPECIES 8235 ENSHHUG00000004457 #22 ENSHHUG00000004455 #25 ENSHHUG00000004450 ##25 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.a #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.a #22 Chinook salmon MODERN SPECIES 403 ENSOTSG00005013724 #22 CCKAR (ENSOTSG00005013722) #23 Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 1024 ENSGT00390000005197.a.cb.f.b.a #22 ENSGT00390000000214.a.b.l.d.a #25 Oncorhynchus ANCESTRAL SPECIES 144 ENSGT00940000155527.j.b.d.b ENSGT00390000017890.b.a.l ENSGT00390000017890.b.a.k ENSGT00390000011749.q.a ENSGT00410000029064.a ENSGT00390000001491.a ENSGT00390000005197.a.cb.f.b.a #22 ENSGT00940000165832.r.b ENSGT00940000157037.a.c.b ENSGT00940000164532.a ENSGT00940000164532.b.b ENSGT00940000156228.p ENSGT00940000167973.e.b.b.b Oncorhynchus_a ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.b.a #22 Coho salmon MODERN SPECIES 1405 ENSOKIG00005049191 DCTN6 (ENSOKIG00005049198) gtf2e2 (ENSOKIG00005049211) smim18 (ENSOKIG00005049217) ENSOKIG00005049228 ENSOKIG00005049263 ENSOKIG00005049322 #22 ENSOKIG00005049577 #25 Rainbow trout MODERN SPECIES 47 ENSOMYG00000059258 ENSOMYG00000074253 ENSOMYG00000074924 ENSOMYG00000055128 ENSOMYG00000065159 ENSOMYG00000050874 #22 ENSOMYG00000057321 #25 Salmo ANCESTRAL SPECIES 696 ENSGT00390000005197.a.cb.f.b.a #22 ENSGT00390000000214.a.b.l.d.b #25 River trout DUPLICATION River trout MODERN SPECIES 404 pcdh18a (ENSSTUG00000021752) ENSSTUG00000021811 ENSSTUG00000021825 ENSSTUG00000021843 pcdh18a (ENSSTUG00000021846) pcdh10a (ENSSTUG00000021851) TYRP1 (ENSSTUG00000021874) ENSSTUG00000022028 ENSSTUG00000022065 ENSSTUG00000022139 ENSSTUG00000022150 DCTN6 (ENSSTUG00000022165) gtf2e2 (ENSSTUG00000022255) smim18 (ENSSTUG00000022332) ENSSTUG00000022357 ENSSTUG00000022744 #22 ENSSTUG00000023011 #25 ENSSTUG00000023102 zgc:195282 (ENSSTUG00000023153) ENSSTUG00000023173 ENSSTUG00000023205 ENSSTUG00000023327 #22 ENSSTUG00000023374 #25 ENSSTUG00000023458 ENSSTUG00000023491 ENSSTUG00000023665 ENSSTUG00000023669 ENSSTUG00000023681 ENSSTUG00000023693 ENSSTUG00000023707 ENSSTUG00000023714 River trout MODERN SPECIES 404 TYRP1 (ENSSTUG00000021874) ENSSTUG00000022028 ENSSTUG00000022065 ENSSTUG00000022139 ENSSTUG00000022150 DCTN6 (ENSSTUG00000022165) gtf2e2 (ENSSTUG00000022255) smim18 (ENSSTUG00000022332) ENSSTUG00000022357 ENSSTUG00000022744 #22 ENSSTUG00000023011 #25 ENSSTUG00000023102 zgc:195282 (ENSSTUG00000023153) ENSSTUG00000023173 ENSSTUG00000023205 ENSSTUG00000023327 #22 ENSSTUG00000023374 #25 ENSSTUG00000023458 ENSSTUG00000023491 ENSSTUG00000023665 ENSSTUG00000023669 ENSSTUG00000023681 ENSSTUG00000023693 ENSSTUG00000023707 ENSSTUG00000023714 ENSSTUG00000023721 ENSSTUG00000023748 ENSSTUG00000023753 ENSSTUG00000023765 ENSSTUG00000023791 ENSSTUG00000023803 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.b.b #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00390000005197.a.cb.f.b.b #22 Rainbow trout MODERN SPECIES 13 AFAP1 (ENSOMYG00000009076) ENSOMYG00000056156 SORCS2 (ENSOMYG00000022367) grpel1 (ENSOMYG00000022403) tada2b (ENSOMYG00000022418) ccdc96 (ENSOMYG00000022426) ENSOMYG00000022432 ENSOMYG00000022449 ENSOMYG00000067246 TBC1D14 (ENSOMYG00000022537) KIAA0232 (ENSOMYG00000022849) S100P (ENSOMYG00000022859) ENSOMYG00000022870 MAN2B2 (ENSOMYG00000023014) SMIM20 (ENSOMYG00000023589) #20 ENSOMYG00000023659 #22 CCKAR (ENSOMYG00000023749) #23 STIM2 (ENSOMYG00000023950) #25 ENSOMYG00000048575 ENSOMYG00000025093 ENSOMYG00000049298 ENSOMYG00000058749 ENSOMYG00000058014 ENSOMYG00000054841 ENSOMYG00000025148 PCDH7 (ENSOMYG00000025183) #28 ENSOMYG00000025295 ENSOMYG00000075927 NWD2 (ENSOMYG00000025344) ENSOMYG00000068557 ENSOMYG00000050026 Elephant shark MODERN SPECIES 1496 ENSCMIG00000010669 ENSCMIG00000010670 #7 ENSCMIG00000010671 #7 ENSCMIG00000010672 #7 ccdc149b (ENSCMIG00000010678) #9 lgi2b (ENSCMIG00000010740) #10 sepsecs (ENSCMIG00000010770) #11 ENSCMIG00000010788 #12 ENSCMIG00000010817 zcchc4 (ENSCMIG00000010863) #14 ENSCMIG00000010873 anapc4 (ENSCMIG00000010885) #15 ENSCMIG00000010899 ##18 SEL1L3 (ENSCMIG00000010906) #19 smim20 (ENSCMIG00000010927) #20 rbpjb (ENSCMIG00000010948) #22 CCKAR (ENSCMIG00000011014) #23 tbc1d19 (ENSCMIG00000011043) #24 STIM2 (ENSCMIG00000011098) #25 ENSCMIG00000011163 PCDH7 (ENSCMIG00000011164) #28 ENSCMIG00000011169 ARAP2 (ENSCMIG00000011206) #37 DTHD1 (ENSCMIG00000011310) NWD2 (ENSCMIG00000011316) ENSCMIG00000011320 pgm2 (ENSCMIG00000011472) TBC1D1 (ENSCMIG00000011691) ENSCMIG00000011756 TLR6 (ENSCMIG00000011762) ENSCMIG00000011764 Cyclostomata ANCESTRAL SPECIES ENSGT00390000005197.a #22 Hagfish MODERN SPECIES 1028 ENSEBUG00000001433 ENSEBUG00000005378 ENSEBUG00000004063 ENSEBUG00000013829 ENSEBUG00000014492 ENSEBUG00000015408 ENSEBUG00000004066 ENSEBUG00000011093 ENSEBUG00000014294 ENSEBUG00000003258 ENSEBUG00000012246 ENSEBUG00000008722 taf1 (ENSEBUG00000010598) ENSEBUG00000013836 ilk (ENSEBUG00000000707) rbpjb (ENSEBUG00000005950) #22 ENSEBUG00000008296 ENSEBUG00000000839 chic1 (ENSEBUG00000011193) ENSEBUG00000006511 ENSEBUG00000003209 RAB9B (ENSEBUG00000004967) ENSEBUG00000003733 ENSEBUG00000008606 ENSEBUG00000011396 ENSEBUG00000016813 ENSEBUG00000014082 ENSEBUG00000000550 txndc9 (ENSEBUG00000008110) ids (ENSEBUG00000001475) ENSEBUG00000010197 Ciona ANCESTRAL SPECIES 145 ENSGT00940000154634 ENSGT00940000153496 ENSGT00940000167589.b ENSGT00390000005197.a #22 ENSGT00950000182886.b.a ENSGT00940000163963.l.a.a.b Ciona savignyi MODERN SPECIES 113 ENSCSAVG00000010572 ENSCSAVG00000010575 ENSCSAVG00000010578 ENSCSAVG00000010598 ENSCSAVG00000010600 ENSCSAVG00000010601 ENSCSAVG00000010603 ENSCSAVG00000010623 ENSCSAVG00000010631 ENSCSAVG00000010636 ENSCSAVG00000010637 ENSCSAVG00000010708 ENSCSAVG00000010709 ENSCSAVG00000010711 ENSCSAVG00000010743 ENSCSAVG00000010744 #22 ENSCSAVG00000010748 ENSCSAVG00000010749 ENSCSAVG00000010761 ENSCSAVG00000010783 ENSCSAVG00000010784 ENSCSAVG00000010785 ENSCSAVG00000010786 ENSCSAVG00000010788 ENSCSAVG00000010794 ENSCSAVG00000010865 ENSCSAVG00000010868 ENSCSAVG00000010869 ENSCSAVG00000010872 ENSCSAVG00000010964 ENSCSAVG00000010967 Ciona intestinalis MODERN SPECIES 6 ENSCING00000011565 ENSCING00000020431 ENSCING00000020178 ENSCING00000001550 ENSCING00000001548 ENSCING00000021499 ENSCING00000024099 ENSCING00000011564 ENSCING00000011563 ENSCING00000018986 ENSCING00000020784 ENSCING00000011562 ENSCING00000001205 ENSCING00000000844 ENSCING00000000841 su(h) (ENSCING00000000838) #22 ENSCING00000000832 ENSCING00000003977 ENSCING00000021992 s-themis-a (ENSCING00000018693) ENSCING00000010799 ENSCING00000011560 ENSCING00000004008 ENSCING00000020559 ENSCING00000008472 #18 ENSCING00000008467 #18 ENSCING00000007500 ENSCING00000007499 ENSCING00000018870 ENSCING00000021491 ENSCING00000007494 Chordata ANCESTRAL SPECIES ENSGT00390000005197.b ##22 Vertebrata ANCESTRAL SPECIES ENSGT00390000005197.b ##22 Gnathostomata ANCESTRAL SPECIES 913 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 Euteleostomi ANCESTRAL SPECIES 105 ENSGT00940000160902 ENSGT00940000158934 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00390000015972 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468 ENSGT00910000148654 ENSGT00940000160613 Sarcopterygii ANCESTRAL SPECIES 264 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00390000015972 Tetrapoda ANCESTRAL SPECIES 126 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000176933 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00390000015972 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000160611 ENSGT00940000155740 ENSGT00390000005315 ENSGT00940000154468 ENSGT00940000164502 Amniota ANCESTRAL SPECIES 19 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000162037 ENSGT00510000047836 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00940000153541.C ENSGT00530000063759.b ENSGT00390000004207 ENSGT00390000017273.B ENSGT00390000017273.A Sauria ANCESTRAL SPECIES 16 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Archelosauria ANCESTRAL SPECIES ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b Archosauria ANCESTRAL SPECIES 13 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Aves ANCESTRAL SPECIES 16 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Neognathae ANCESTRAL SPECIES 16 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Neognathae_b ANCESTRAL SPECIES 17 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Neognathae_c ANCESTRAL SPECIES 20 ENSGT00940000161086 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Golden eagle MODERN SPECIES 19 SERINC3 (ENSACCG00020010177) PKIG (ENSACCG00020010183) ADA (ENSACCG00020010193) CCN5 (ENSACCG00020010235) ENSACCG00020010257 KCNK15 (ENSACCG00020010264) RIMS4 (ENSACCG00020010274) YWHAB (ENSACCG00020010283) ENSACCG00020010303 ENSACCG00020010317 ENSACCG00020010331 STK4 (ENSACCG00020010352) KCNS1 (ENSACCG00020010367) ENSACCG00020010376 MATN4 (ENSACCG00020010396) RBPJL (ENSACCG00020010407) ##22 SDC4 (ENSACCG00020010417) SYS1 (ENSACCG00020010428) ENSACCG00020010437 DBNDD2 (ENSACCG00020010444) PIGT (ENSACCG00020010457) BLCAP (ENSACCG00020010476) SRC (ENSACCG00020010492) MANBAL (ENSACCG00020010509) GHRH (ENSACCG00020010519) RPN2 (ENSACCG00020010670) EMILIN3 (ENSACCG00020010763) LPIN3 (ENSACCG00020010782) ZHX3 (ENSACCG00020010800) PLCG1 (ENSACCG00020010818) TOP1 (ENSACCG00020010916) Kakapo MODERN SPECIES 5 SERINC3 (ENSSHBG00005005503) PKIG (ENSSHBG00005005541) ADA (ENSSHBG00005005562) CCN5 (ENSSHBG00005005630) ENSSHBG00005005789 KCNK15 (ENSSHBG00005005799) RIMS4 (ENSSHBG00005005810) YWHAB (ENSSHBG00005005826) ENSSHBG00005005838 ENSSHBG00005005872 ENSSHBG00005005891 STK4 (ENSSHBG00005005904) KCNS1 (ENSSHBG00005005915) ENSSHBG00005005928 MATN4 (ENSSHBG00005005948) RBPJL (ENSSHBG00005005989) ##22 SDC4 (ENSSHBG00005006138) SYS1 (ENSSHBG00005006153) ENSSHBG00005006165 DBNDD2 (ENSSHBG00005006192) PIGT (ENSSHBG00005006214) BLCAP (ENSSHBG00005006230) SRC (ENSSHBG00005006259) MANBAL (ENSSHBG00005006284) ENSSHBG00005006300 RPN2 (ENSSHBG00005006337) ENSSHBG00005006367 ENSSHBG00005006392 ENSSHBG00005006465 L3MBTL1 (ENSSHBG00005006765) SRSF6 (ENSSHBG00005006791) Passeriformes ANCESTRAL SPECIES 19 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Great tit MODERN SPECIES 12 TTPAL (ENSPMJG00000004268) SERINC3 (ENSPMJG00000004258) PKIG (ENSPMJG00000004255) ADA (ENSPMJG00000004251) CCN5 (ENSPMJG00000004151) ENSPMJG00000004149 KCNK15 (ENSPMJG00000004146) RIMS4 (ENSPMJG00000004141) YWHAB (ENSPMJG00000004119) PABPC1L (ENSPMJG00000004104) ENSPMJG00000004095 STK4 (ENSPMJG00000004079) KCNS1 (ENSPMJG00000004077) ENSPMJG00000004073 MATN4 (ENSPMJG00000004064) RBPJL (ENSPMJG00000004060) ##22 SDC4 (ENSPMJG00000004058) SYS1 (ENSPMJG00000004056) ENSPMJG00000004055 DBNDD2 (ENSPMJG00000004051) PIGT (ENSPMJG00000004046) BLCAP (ENSPMJG00000004042) SRC (ENSPMJG00000004037) MANBAL (ENSPMJG00000004018) ENSPMJG00000004008 RPN2 (ENSPMJG00000003981) EMILIN3 (ENSPMJG00000003979) LPIN3 (ENSPMJG00000003976) ZHX3 (ENSPMJG00000003972) PLCG1 (ENSPMJG00000003943) ENSPMJG00000003939 Passeriformes_d ANCESTRAL SPECIES 19 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Flycatcher MODERN SPECIES 12 TTPAL (ENSFALG00000005261) SERINC3 (ENSFALG00000005276) ENSFALG00000028674 ADA (ENSFALG00000005317) CCN5 (ENSFALG00000027916) ENSFALG00000023272 KCNK15 (ENSFALG00000005351) RIMS4 (ENSFALG00000005359) YWHAB (ENSFALG00000005366) PABPC1L (ENSFALG00000005372) ENSFALG00000005382 STK4 (ENSFALG00000005398) KCNS1 (ENSFALG00000005414) ENSFALG00000025222 MATN4 (ENSFALG00000005417) RBPJL (ENSFALG00000005428) ##22 SDC4 (ENSFALG00000005448) ENSFALG00000026151 ENSFALG00000023366 DBNDD2 (ENSFALG00000023432) PIGT (ENSFALG00000005470) BLCAP (ENSFALG00000015339) SRC (ENSFALG00000005512) MANBAL (ENSFALG00000005549) GHRH (ENSFALG00000025330) RPN2 (ENSFALG00000005557) EMILIN3 (ENSFALG00000024656) LPIN3 (ENSFALG00000005561) ZHX3 (ENSFALG00000005566) PLCG1 (ENSFALG00000005574) TOP1 (ENSFALG00000005586) Passeriformes_g ANCESTRAL SPECIES 19 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Passeroidea ANCESTRAL SPECIES 18 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00960000193217 ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Zebra finch MODERN SPECIES 13 HNF4A (ENSTGUG00000005271) TTPAL (ENSTGUG00000005257) SERINC3 (ENSTGUG00000005242) ADA (ENSTGUG00000005206) CCN5 (ENSTGUG00000005202) ENSTGUG00000005199 KCNK15 (ENSTGUG00000005191) RIMS4 (ENSTGUG00000028883) YWHAB (ENSTGUG00000024139) PABPC1L (ENSTGUG00000005114) TOMM34 (ENSTGUG00000005104) STK4 (ENSTGUG00000005057) KCNS1 (ENSTGUG00000005049) ENSTGUG00000022434 MATN4 (ENSTGUG00000005029) RBPJL (ENSTGUG00000005009) ##22 SDC4 (ENSTGUG00000025016) ENSTGUG00000023602 DBNDD2 (ENSTGUG00000005004) PIGT (ENSTGUG00000004963) BLCAP (ENSTGUG00000024673) SRC (ENSTGUG00000004937) ENSTGUG00000028661 GHRH (ENSTGUG00000004928) RPN2 (ENSTGUG00000004892) EMILIN3 (ENSTGUG00000004880) LPIN3 (ENSTGUG00000004825) ZHX3 (ENSTGUG00000004817) PLCG1 (ENSTGUG00000004737) TOP1 (ENSTGUG00000004676) MAFB (ENSTGUG00000025008) Common canary MODERN SPECIES 21 TTPAL (ENSSCAG00000012924) SERINC3 (ENSSCAG00000012922) ENSSCAG00000012919 ADA (ENSSCAG00000012914) CCN5 (ENSSCAG00000012876) ENSSCAG00000012863 KCNK15 (ENSSCAG00000012855) RIMS4 (ENSSCAG00000012849) YWHAB (ENSSCAG00000012845) PABPC1L (ENSSCAG00000012677) TOMM34 (ENSSCAG00000012640) STK4 (ENSSCAG00000012626) KCNS1 (ENSSCAG00000012617) ENSSCAG00000012614 MATN4 (ENSSCAG00000012607) RBPJL (ENSSCAG00000012601) ##22 SDC4 (ENSSCAG00000012584) ENSSCAG00000012578 ENSSCAG00000012575 DBNDD2 (ENSSCAG00000012571) PIGT (ENSSCAG00000012560) BLCAP (ENSSCAG00000012551) SRC (ENSSCAG00000012544) MANBAL (ENSSCAG00000012540) ENSSCAG00000012536 RPN2 (ENSSCAG00000012516) ENSSCAG00000012507 EMILIN3 (ENSSCAG00000012505) LPIN3 (ENSSCAG00000012488) ZHX3 (ENSSCAG00000012483) PLCG1 (ENSSCAG00000012473) Medium ground finch MODERN SPECIES 40 TTPAL (ENSGFOG00000001946) SERINC3 (ENSGFOG00000001959) PKIG (ENSGFOG00000001978) ADA (ENSGFOG00000001994) CCN5 (ENSGFOG00000002042) KCNK15 (ENSGFOG00000002055) RIMS4 (ENSGFOG00000002059) YWHAB (ENSGFOG00000002069) PABPC1L (ENSGFOG00000002077) ENSGFOG00000002097 TOMM34 (ENSGFOG00000002109) STK4 (ENSGFOG00000002131) KCNS1 (ENSGFOG00000002294) ENSGFOG00000002303 MATN4 (ENSGFOG00000002328) RBPJL (ENSGFOG00000002374) ##22 SDC4 (ENSGFOG00000002392) SYS1 (ENSGFOG00000002433) ENSGFOG00000002453 DBNDD2 (ENSGFOG00000002476) PIGT (ENSGFOG00000002496) BLCAP (ENSGFOG00000002663) SRC (ENSGFOG00000002672) MANBAL (ENSGFOG00000002683) GHRH (ENSGFOG00000002700) RPN2 (ENSGFOG00000002746) EMILIN3 (ENSGFOG00000003050) ENSGFOG00000003061 ZHX3 (ENSGFOG00000003074) PLCG1 (ENSGFOG00000003099) TOP1 (ENSGFOG00000003195) Galloanserae ANCESTRAL SPECIES 15 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.z ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Anatidae ANCESTRAL SPECIES 22 ENSGT00940000161086 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00950000182981.a ENSGT00940000154258.a ENSGT00390000001804 ENSGT00940000157601 ENSGT00950000182920.b.a.a.c.a.a.a.d ENSGT00940000154663.cb ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT00950000183131.a ENSGT00950000183176.a ENSGT00950000182863.A.a.b ENSGT00940000158764 ENSGT00940000159233 ENSGT00390000018330 Duck MODERN SPECIES 12 FITM2 (ENSAPLG00000018680) R3HDML (ENSAPLG00000017051) HNF4A (ENSAPLG00000008950) TTPAL (ENSAPLG00000008938) SERINC3 (ENSAPLG00000008793) ENSAPLG00000000658 ADA (ENSAPLG00000008763) RIMS4 (ENSAPLG00000008678) YWHAB (ENSAPLG00000018025) PABPC1L (ENSAPLG00000008415) ENSAPLG00000008374 STK4 (ENSAPLG00000008260) KCNS1 (ENSAPLG00000027411) ENSAPLG00000017021 MATN4 (ENSAPLG00000008140) RBPJL (ENSAPLG00000008031) ##22 AHCY (ENSAPLG00000007974) ASIP (ENSAPLG00000007960) EIF2S2 (ENSAPLG00000013245) RALY (ENSAPLG00000012983) ENSAPLG00000012568 CHMP4B (ENSAPLG00000012481) ZNF341 (ENSAPLG00000012237) PXMP4 (ENSAPLG00000012234) NECAB3 (ENSAPLG00000011538) CBFA2T2 (ENSAPLG00000011108) SNTA1 (ENSAPLG00000030952) TOX2 (ENSAPLG00000009436) EDEM2 (ENSAPLG00000009712) TRPC4AP (ENSAPLG00000009980) ENSAPLG00000011220 Pink-footed goose MODERN SPECIES 10 TTPAL (ENSABRG00000018880) SERINC3 (ENSABRG00000018873) ENSABRG00000018866 ADA (ENSABRG00000018860) CCN5 (ENSABRG00000018799) ENSABRG00000018790 KCNK15 (ENSABRG00000018786) RIMS4 (ENSABRG00000018781) YWHAB (ENSABRG00000018777) PABPC1L (ENSABRG00000018767) ENSABRG00000018761 STK4 (ENSABRG00000018758) KCNS1 (ENSABRG00000018756) ENSABRG00000018749 MATN4 (ENSABRG00000018746) RBPJL (ENSABRG00000018726) ##22 AHCY (ENSABRG00000018714) ASIP (ENSABRG00000018698) EIF2S2 (ENSABRG00000018685) RALY (ENSABRG00000018676) ENSABRG00000018650 ENSABRG00000018638 ZNF341 (ENSABRG00000018632) PXMP4 (ENSABRG00000018629) E2F1 (ENSABRG00000018627) NECAB3 (ENSABRG00000018624) CBFA2T2 (ENSABRG00000018621) SNTA1 (ENSABRG00000018613) TOX2 (ENSABRG00000018605) EDEM2 (ENSABRG00000018594) TRPC4AP (ENSABRG00000018584) Phasianidae ANCESTRAL SPECIES 15 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01020000230603 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.y.a ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Phasianidae_b ANCESTRAL SPECIES 15 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422.y.a.a ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Chicken MODERN SPECIES 12 HNF4A (ENSGALG00010024342) TTPAL (ENSGALG00010024323) SERINC3 (ENSGALG00010024313) PKIG (ENSGALG00010024304) ADA (ENSGALG00010024286) ENSGALG00010024266 ENSGALG00010024254 KCNK15 (ENSGALG00010024222) RIMS4 (ENSGALG00010024212) YWHAB (ENSGALG00010022076) PABPC1L (ENSGALG00010022065) ENSGALG00010021643 STK4 (ENSGALG00010021540) KCNS1 (ENSGALG00010021503) MATN4 (ENSGALG00010021742) RBPJL (ENSGALG00010021729) ##22 SDC4 (ENSGALG00010021717) SYS1 (ENSGALG00010021699) ENSGALG00010021694 ENSGALG00010024979 DBNDD2 (ENSGALG00010021685) PIGT (ENSGALG00010021680) BLCAP (ENSGALG00010021670) SRC (ENSGALG00010021638) MANBAL (ENSGALG00010022593) GHRH (ENSGALG00010022562) RPN2 (ENSGALG00010022438) EMILIN3 (ENSGALG00010022392) ZHX3 (ENSGALG00010022377) PLCG1 (ENSGALG00010022365) TOP1 (ENSGALG00010022623) Turkey MODERN SPECIES 14 ENSMGAG00000003121 ENSMGAG00000003153 ENSMGAG00000003174 ENSMGAG00000003300 ENSMGAG00000003320 ENSMGAG00000003334 ENSMGAG00000003428 ENSMGAG00000002232 ENSMGAG00000002893 SRC (ENSMGAG00000003468) ENSMGAG00000015521 ENSMGAG00000003492 ENSMGAG00000003537 SYS1 (ENSMGAG00000021737) ENSMGAG00000003549 ENSMGAG00000017264 ##22 ENSMGAG00000003644 MATN4 (ENSMGAG00000003835) ENSMGAG00000021763 KCNS1 (ENSMGAG00000003530) ENSMGAG00000018686 ENSMGAG00000003574 ENSMGAG00000003674 ENSMGAG00000003654 ENSMGAG00000003999 ENSMGAG00000004020 ENSMGAG00000003852 ENSMGAG00000016956 ENSMGAG00000015531 ADA (ENSMGAG00000003859) ENSMGAG00000003949 Japanese quail MODERN SPECIES 12 TTPAL (ENSCJPG00005000991) SERINC3 (ENSCJPG00005000934) ENSCJPG00005000923 ADA (ENSCJPG00005000898) CCN5 (ENSCJPG00005020940) ENSCJPG00005020939 KCNK15 (ENSCJPG00005020938) RIMS4 (ENSCJPG00005020937) YWHAB (ENSCJPG00005020936) PABPC1L (ENSCJPG00005020935) ENSCJPG00005020934 STK4 (ENSCJPG00005020933) KCNS1 (ENSCJPG00005020932) ENSCJPG00005020931 MATN4 (ENSCJPG00005020930) RBPJL (ENSCJPG00005020929) ##22 SDC4 (ENSCJPG00005020928) SYS1 (ENSCJPG00005020927) ENSCJPG00005020926 ENSCJPG00005020925 DBNDD2 (ENSCJPG00005020924) PIGT (ENSCJPG00005020923) BLCAP (ENSCJPG00005020922) SRC (ENSCJPG00005020921) ENSCJPG00005020919 ENSCJPG00005020918 ENSCJPG00005020917 ENSCJPG00005020916 RPN2 (ENSCJPG00005020915) EMILIN3 (ENSCJPG00005020913) ZHX3 (ENSCJPG00005020912) African ostrich MODERN SPECIES 491 TTPAL (ENSSCUG00000005762) SERINC3 (ENSSCUG00000005764) PKIG (ENSSCUG00000005766) ADA (ENSSCUG00000005768) CCN5 (ENSSCUG00000005770) ENSSCUG00000005771 RIMS4 (ENSSCUG00000005775) KCNK15 (ENSSCUG00000005777) YWHAB (ENSSCUG00000005778) PABPC1L (ENSSCUG00000005780) TOMM34 (ENSSCUG00000005781) STK4 (ENSSCUG00000005784) KCNS1 (ENSSCUG00000005786) ENSSCUG00000005787 MATN4 (ENSSCUG00000005789) RBPJL (ENSSCUG00000005790) ##22 SDC4 (ENSSCUG00000005791) SYS1 (ENSSCUG00000005792) ENSSCUG00000005793 ENSSCUG00000005794 PIGT (ENSSCUG00000005797) BLCAP (ENSSCUG00000005798) SRC (ENSSCUG00000005799) MANBAL (ENSSCUG00000005800) ENSSCUG00000005801 RPN2 (ENSSCUG00000005803) EMILIN3 (ENSSCUG00000005806) ENSSCUG00000005807 ENSSCUG00000005810 ZHX3 (ENSSCUG00000005813) PLCG1 (ENSSCUG00000005814) Australian saltwater crocodile MODERN SPECIES 41 ADA (ENSCPRG00005011778) CCN5 (ENSCPRG00005011844) ENSCPRG00005011846 KCNK15 (ENSCPRG00005011851) RIMS4 (ENSCPRG00005011852) YWHAB (ENSCPRG00005011857) PABPC1L (ENSCPRG00005011861) ENSCPRG00005011950 STK4 (ENSCPRG00005011953) ENSCPRG00005011962 KCNS1 (ENSCPRG00005011966) ENSCPRG00005011975 SLPI (ENSCPRG00005011979) ENSCPRG00005011984 MATN4 (ENSCPRG00005011989) RBPJL (ENSCPRG00005011998) ##22 SDC4 (ENSCPRG00005012010) SYS1 (ENSCPRG00005012015) ENSCPRG00005012021 DBNDD2 (ENSCPRG00005012030) BLCAP (ENSCPRG00005012032) SRC (ENSCPRG00005012037) MANBAL (ENSCPRG00005012050) ENSCPRG00005012059 RPN2 (ENSCPRG00005012065) EMILIN3 (ENSCPRG00005012079) LPIN3 (ENSCPRG00005012082) ZHX3 (ENSCPRG00005012099) PLCG1 (ENSCPRG00005012143) TOP1 (ENSCPRG00005012402) MAFB (ENSCPRG00005012424) Cryptodira ANCESTRAL SPECIES 7 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Testudinoidea ANCESTRAL SPECIES 28 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Emydidae ANCESTRAL SPECIES 50 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00530000063023.B.k ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000157106.x.b ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 painted turtle MODERN SPECIES 700 RIMS4 (ENSCPBG00000017739) YWHAB (ENSCPBG00000017746) PABPC1L (ENSCPBG00000017755) ENSCPBG00000017765 STK4 (ENSCPBG00000017770) ENSCPBG00000017782 KCNS1 (ENSCPBG00000017793) SLPI (ENSCPBG00000017804) ENSCPBG00000017812 ENSCPBG00000017814 ENSCPBG00000017815 ENSCPBG00000017818 ENSCPBG00000017822 ENSCPBG00000017825 MATN4 (ENSCPBG00000017829) RBPJL (ENSCPBG00000017836) ##22 SDC4 (ENSCPBG00000017841) SYS1 (ENSCPBG00000017843) ENSCPBG00000017844 ENSCPBG00000017845 DBNDD2 (ENSCPBG00000017847) PIGT (ENSCPBG00000017850) BLCAP (ENSCPBG00000017855) SRC (ENSCPBG00000017859) MANBAL (ENSCPBG00000017865) ENSCPBG00000017871 RPN2 (ENSCPBG00000017877) EMILIN3 (ENSCPBG00000017889) LPIN3 (ENSCPBG00000017892) ZHX3 (ENSCPBG00000017905) PLCG1 (ENSCPBG00000017911) Three-toed box turtle MODERN SPECIES 108 ADA (ENSTMTG00000020797) CCN5 (ENSTMTG00000020854) ENSTMTG00000020873 KCNK15 (ENSTMTG00000020876) RIMS4 (ENSTMTG00000020882) YWHAB (ENSTMTG00000020892) ENSTMTG00000020903 ENSTMTG00000020917 ENSTMTG00000011224 STK4 (ENSTMTG00000011464) KCNS1 (ENSTMTG00000011489) MATN4 (ENSTMTG00000011511) ENSTMTG00000011619 RBPJL (ENSTMTG00000011627) ##22 SDC4 (ENSTMTG00000011689) ENSTMTG00000011705 DBNDD2 (ENSTMTG00000011721) PIGT (ENSTMTG00000011736) BLCAP (ENSTMTG00000011791) SRC (ENSTMTG00000011827) MANBAL (ENSTMTG00000012239) ENSTMTG00000012254 RPN2 (ENSTMTG00000012273) EMILIN3 (ENSTMTG00000012308) LPIN3 (ENSTMTG00000012429) ZHX3 (ENSTMTG00000013363) PLCG1 (ENSTMTG00000013440) TOP1 (ENSTMTG00000013991) MAFB (ENSTMTG00000014537) Testudinidae ANCESTRAL SPECIES 34 ENSGT00940000157965 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b.j ENSGT00950000183113.a.b.i ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.y ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 ENSGT00940000155006 Abingdon island giant tortoise MODERN SPECIES 2599 KCNK15 (ENSCABG00000020068) RIMS4 (ENSCABG00000020069) YWHAB (ENSCABG00000020070) ENSCABG00000020071 ENSCABG00000020072 ENSCABG00000020074 ENSCABG00000020078 STK4 (ENSCABG00000020080) KCNS1 (ENSCABG00000020084) ENSCABG00000020086 ENSCABG00000020087 ENSCABG00000020089 ENSCABG00000020091 SLPI (ENSCABG00000020094) MATN4 (ENSCABG00000020096) RBPJL (ENSCABG00000020103) ##22 SDC4 (ENSCABG00000020106) SYS1 (ENSCABG00000020109) ENSCABG00000020110 DBNDD2 (ENSCABG00000020113) PIGT (ENSCABG00000020116) BLCAP (ENSCABG00000020123) SRC (ENSCABG00000020125) MANBAL (ENSCABG00000020130) ENSCABG00000020132 RPN2 (ENSCABG00000020134) EMILIN3 (ENSCABG00000020144) LPIN3 (ENSCABG00000020152) ZHX3 (ENSCABG00000020158) PLCG1 (ENSCABG00000020159) TOP1 (ENSCABG00000020169) Goode s thornscrub tortoise MODERN SPECIES 5 PKIG (ENSGEVG00005008214) ENSGEVG00005008245 ENSGEVG00005008322 CCN5 (ENSGEVG00005008390) KCNK15 (ENSGEVG00005008413) RIMS4 (ENSGEVG00005008455) ENSGEVG00005008486 YWHAB (ENSGEVG00005008499) PABPC1L (ENSGEVG00005008519) ENSGEVG00005008548 STK4 (ENSGEVG00005008566) KCNS1 (ENSGEVG00005008588) ENSGEVG00005008638 ENSGEVG00005008703 MATN4 (ENSGEVG00005008768) RBPJL (ENSGEVG00005009025) ##22 SDC4 (ENSGEVG00005009088) SYS1 (ENSGEVG00005009110) ENSGEVG00005009135 DBNDD2 (ENSGEVG00005009205) PIGT (ENSGEVG00005009236) BLCAP (ENSGEVG00005009275) SRC (ENSGEVG00005009310) MANBAL (ENSGEVG00005009345) ENSGEVG00005009374 RPN2 (ENSGEVG00005009442) EMILIN3 (ENSGEVG00005009554) LPIN3 (ENSGEVG00005009617) ZHX3 (ENSGEVG00005009685) PLCG1 (ENSGEVG00005009894) TOP1 (ENSGEVG00005011089) Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 992 RANBP9 (ENSPSIG00000009714) NOL7 (ENSPSIG00000009804) KIF13A (ENSPSIG00000009810) NHLRC1 (ENSPSIG00000012218) TPMT (ENSPSIG00000012256) KDM1B (ENSPSIG00000013189) DEK (ENSPSIG00000013566) RNF144B (ENSPSIG00000014356) ENSPSIG00000001124 ENSPSIG00000014866 ID4 (ENSPSIG00000014895) MBOAT1 (ENSPSIG00000015096) ENSPSIG00000015422 E2F3 (ENSPSIG00000015517) CDKAL1 (ENSPSIG00000015565) ENSPSIG00000015693 ##22 ENSPSIG00000015703 ENSPSIG00000015782 PRL (ENSPSIG00000015977) Chinese turtle MODERN SPECIES 993 ENSPSIG00000014642 ENSPSIG00000014638 ENSPSIG00000014632 ENSPSIG00000014575 MATN4 (ENSPSIG00000014146) ENSPSIG00000014017 ##22 SDC4 (ENSPSIG00000013739) SYS1 (ENSPSIG00000013719) DBNDD2 (ENSPSIG00000013579) PIGT (ENSPSIG00000013315) BLCAP (ENSPSIG00000013218) SRC (ENSPSIG00000013186) MANBAL (ENSPSIG00000013124) ENSPSIG00000013080 RPN2 (ENSPSIG00000012340) EMILIN3 (ENSPSIG00000012207) LPIN3 (ENSPSIG00000010922) ZHX3 (ENSPSIG00000010741) PLCG1 (ENSPSIG00000008328) TOP1 (ENSPSIG00000006937) MAFB (ENSPSIG00000000813) Lepidosauria ANCESTRAL SPECIES 6 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT01010000222962 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT01090000260372 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Episquamata ANCESTRAL SPECIES 1 ENSGT01010000223418 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT01010000224213 ENSGT01090000260372 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Laterata ANCESTRAL SPECIES 14 ENSGT01030000234623.a.a.a.a.a ENSGT01010000223418 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT01010000224213 ENSGT01090000260372 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Common wall lizard MODERN SPECIES 14 ENSPMRG00000008646 ENSPMRG00000008637 ENSPMRG00000008626 ENSPMRG00000008618 STK4 (ENSPMRG00000008591) KCNS1 (ENSPMRG00000008576) ENSPMRG00000008571 ENSPMRG00000008564 ENSPMRG00000008557 ENSPMRG00000008546 ENSPMRG00000008542 ENSPMRG00000008536 ENSPMRG00000008529 ENSPMRG00000008524 MATN4 (ENSPMRG00000008507) RBPJL (ENSPMRG00000008486) ##22 SDC4 (ENSPMRG00000008476) SYS1 (ENSPMRG00000008474) ENSPMRG00000008473 ENSPMRG00000021638 DBNDD2 (ENSPMRG00000021635) PIGT (ENSPMRG00000021612) BLCAP (ENSPMRG00000021597) ENSPMRG00000021592 SRC (ENSPMRG00000021569) ENSPMRG00000021561 ENSPMRG00000021556 MANBAL (ENSPMRG00000021552) ENSPMRG00000021548 ENSPMRG00000021544 ENSPMRG00000021536 Argentine black and white tegu MODERN SPECIES 22 ENSSMRG00000005901 ADA (ENSSMRG00000005905) CCN5 (ENSSMRG00000005924) ENSSMRG00000005930 KCNK15 (ENSSMRG00000005933) RIMS4 (ENSSMRG00000005981) YWHAB (ENSSMRG00000005982) PABPC1L (ENSSMRG00000006023) ENSSMRG00000006029 STK4 (ENSSMRG00000006040) KCNS1 (ENSSMRG00000006055) ENSSMRG00000006065 ENSSMRG00000006069 ENSSMRG00000006072 MATN4 (ENSSMRG00000006076) RBPJL (ENSSMRG00000006117) ##22 ENSSMRG00000006118 ENSSMRG00000006119 SYS1 (ENSSMRG00000006121) ENSSMRG00000006122 DBNDD2 (ENSSMRG00000006132) PIGT (ENSSMRG00000006137) BLCAP (ENSSMRG00000006139) SRC (ENSSMRG00000006140) MANBAL (ENSSMRG00000006196) ENSSMRG00000006197 RPN2 (ENSSMRG00000006200) EMILIN3 (ENSSMRG00000006237) LPIN3 (ENSSMRG00000006250) ZHX3 (ENSSMRG00000006273) PLCG1 (ENSSMRG00000006294) Toxicofera ANCESTRAL SPECIES 1 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT01010000224213 ENSGT01090000260372 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Elapidae ANCESTRAL SPECIES 1 ENSGT01010000223418 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902.b ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT01010000224213 ENSGT01090000260372 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Elapidae_a ANCESTRAL SPECIES 3 ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902.b ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000154697.a.b ENSGT00390000008918 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT01010000224213 ENSGT01090000260372 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b ENSGT00940000158901 Acanthophiinae ANCESTRAL SPECIES 2 ENSGT00940000160207 ENSGT00940000155094 ENSGT00940000160902.b ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000159787 ENSGT00940000160096 ENSGT00990000210349 ENSGT00990000213695 ENSGT01010000224213 ENSGT01100000265234 ENSGT01090000260372 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00960000189856 ENSGT00990000214060 ENSGT00940000161212 ENSGT00390000018558 ENSGT00390000014105 ENSGT00940000158250 ENSGT00390000003422 ENSGT00950000183154.b.b ENSGT00390000002635 ENSGT01030000234633.B.b ENSGT00940000160046 ENSGT00950000182893.a.a.b Eastern brown snake MODERN SPECIES 8 KCNK15 (ENSPTXG00000007490) RIMS4 (ENSPTXG00000007492) YWHAB (ENSPTXG00000007494) ENSPTXG00000007495 ENSPTXG00000007496 ENSPTXG00000007497 STK4 (ENSPTXG00000007499) KCNS1 (ENSPTXG00000007501) ENSPTXG00000007503 ENSPTXG00000007505 ENSPTXG00000007507 ENSPTXG00000007509 ENSPTXG00000007510 ENSPTXG00000007512 ENSPTXG00000007514 RBPJL (ENSPTXG00000007515) ##22 SDC4 (ENSPTXG00000007516) SYS1 (ENSPTXG00000007517) ENSPTXG00000007518 ENSPTXG00000007519 ENSPTXG00000007520 DBNDD2 (ENSPTXG00000007521) PIGT (ENSPTXG00000007522) ENSPTXG00000007523 SRC (ENSPTXG00000007524) MANBAL (ENSPTXG00000007525) ENSPTXG00000007526 RPN2 (ENSPTXG00000007527) EMILIN3 (ENSPTXG00000007528) LPIN3 (ENSPTXG00000007529) ZHX3 (ENSPTXG00000007530) Mainland tiger snake MODERN SPECIES 10 KCNK15 (ENSNSUG00000014737) RIMS4 (ENSNSUG00000014738) YWHAB (ENSNSUG00000014739) ENSNSUG00000014758 ENSNSUG00000014759 ENSNSUG00000014760 STK4 (ENSNSUG00000014761) KCNS1 (ENSNSUG00000014798) ENSNSUG00000014799 ENSNSUG00000014800 ENSNSUG00000014801 ENSNSUG00000014802 ENSNSUG00000014803 SLPI (ENSNSUG00000014804) MATN4 (ENSNSUG00000014805) RBPJL (ENSNSUG00000014806) ##22 SDC4 (ENSNSUG00000014807) SYS1 (ENSNSUG00000014808) ENSNSUG00000014809 ENSNSUG00000014810 ENSNSUG00000014811 DBNDD2 (ENSNSUG00000000018) PIGT (ENSNSUG00000000026) BLCAP (ENSNSUG00000000088) SRC (ENSNSUG00000000110) MANBAL (ENSNSUG00000000158) ENSNSUG00000000171 RPN2 (ENSNSUG00000000195) EMILIN3 (ENSNSUG00000000219) LPIN3 (ENSNSUG00000000252) ZHX3 (ENSNSUG00000001092) Indian cobra MODERN SPECIES 2 ENSNNAG00000001916 ADA (ENSNNAG00000001920) CCN5 (ENSNNAG00000001933) ENSNNAG00000001940 KCNK15 (ENSNNAG00000001947) RIMS4 (ENSNNAG00000001953) YWHAB (ENSNNAG00000001973) PABPC1L (ENSNNAG00000002003) ENSNNAG00000002066 STK4 (ENSNNAG00000002082) KCNS1 (ENSNNAG00000002100) ENSNNAG00000002106 ENSNNAG00000002115 ENSNNAG00000002124 MATN4 (ENSNNAG00000002133) RBPJL (ENSNNAG00000002147) ##22 SDC4 (ENSNNAG00000002162) SYS1 (ENSNNAG00000002169) ENSNNAG00000002174 ENSNNAG00000002179 ENSNNAG00000002191 DBNDD2 (ENSNNAG00000002211) PIGT (ENSNNAG00000002239) BLCAP (ENSNNAG00000002253) SRC (ENSNNAG00000002263) RPN2 (ENSNNAG00000002294) ENSNNAG00000002350 ENSNNAG00000002357 EMILIN3 (ENSNNAG00000002364) LPIN3 (ENSNNAG00000002374) ZHX3 (ENSNNAG00000002389) Lizard MODERN SPECIES 3 STK4 (ENSACAG00000012088) KCNS1 (ENSACAG00000012246) ENSACAG00000045405 ENSACAG00000040920 ENSACAG00000037865 ENSACAG00000035067 ENSACAG00000045569 ENSACAG00000035827 ENSACAG00000038941 ENSACAG00000044397 ENSACAG00000043190 SLPI (ENSACAG00000028517) ENSACAG00000039979 ENSACAG00000040012 MATN4 (ENSACAG00000012284) RBPJL (ENSACAG00000012362) ##22 ENSACAG00000044431 SDC4 (ENSACAG00000012456) ENSACAG00000042017 ENSACAG00000027208 ENSACAG00000027958 ENSACAG00000013632 ENSACAG00000042879 ENSACAG00000036155 ENSACAG00000014094 ENSACAG00000041144 ENSACAG00000014095 ENSACAG00000041645 ENSACAG00000042744 ACTR5 (ENSACAG00000014155) PPP1R16B (ENSACAG00000014183) tuatara MODERN SPECIES 162 MATN4 (ENSSPUG00000004109) RBPJL (ENSSPUG00000004071) ##22 SDC4 (ENSSPUG00000004048) SYS1 (ENSSPUG00000004031) DBNDD2 (ENSSPUG00000004015) PIGT (ENSSPUG00000003953) BLCAP (ENSSPUG00000003924) SRC (ENSSPUG00000003903) MANBAL (ENSSPUG00000003893) ENSSPUG00000003884 ENSSPUG00000003858 RPN2 (ENSSPUG00000003832) ENSSPUG00000003818 LPIN3 (ENSSPUG00000003774) PLCG1 (ENSSPUG00000003652) TOP1 (ENSSPUG00000003350) MAFB (ENSSPUG00000003277) Mammalia ANCESTRAL SPECIES 15 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000162037 ENSGT00510000047836 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00940000153541.C ENSGT00530000063759.b ENSGT00390000004207 ENSGT00390000017273.B ENSGT00390000017273.A Theria ANCESTRAL SPECIES 19 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT00510000047836 ENSGT00930000150941 ENSGT00940000153725.a.a ENSGT00940000153541.C ENSGT00530000063759.b ENSGT00390000004207 ENSGT00390000017273.B ENSGT00390000017273.A Eutheria ANCESTRAL SPECIES 11 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000004362 ENSGT00730000111454 Atlantogenata ANCESTRAL SPECIES 6 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00950000184089 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000004362 ENSGT00440000034744 ENSGT00730000111454 Xenarthra ANCESTRAL SPECIES 13 ENSGT00940000159787 ENSGT00940000160096 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000156753.c ENSGT00940000162037 ENSGT01030000237901 ENSGT00940000163972 ENSGT00940000163115 ENSGT00940000163481 ENSGT00390000004362 ENSGT00730000111454 ENSGT00510000047836 Sloth MODERN SPECIES 2069 ENSCHOG00000000749 ##22 Armadillo MODERN SPECIES 2704 ENSDNOG00000043508 STK4 (ENSDNOG00000039637) KCNS1 (ENSDNOG00000012849) ENSDNOG00000042072 ENSDNOG00000036989 SLPI (ENSDNOG00000040689) MATN4 (ENSDNOG00000014948) RBPJL (ENSDNOG00000011919) ##22 SDC4 (ENSDNOG00000011932) SYS1 (ENSDNOG00000011943) TP53TG5 (ENSDNOG00000004013) DBNDD2 (ENSDNOG00000049269) PIGT (ENSDNOG00000038350) ENSDNOG00000031019 EPPIN (ENSDNOG00000005309) WFDC8 (ENSDNOG00000015532) ENSDNOG00000011958 ENSDNOG00000033250 ENSDNOG00000018194 ENSDNOG00000039076 ENSDNOG00000015722 WFDC3 (ENSDNOG00000003084) DNTTIP1 (ENSDNOG00000003085) Afrotheria ANCESTRAL SPECIES 3 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00950000184089 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163972 ENSGT00390000004362 ENSGT00440000034744 ENSGT00510000047836 ENSGT00930000150941 ENSGT00940000153541.C Tenrec MODERN SPECIES 2266 MATN4 (ENSETEG00000005060) RBPJL (ENSETEG00000005066) ##22 Afrotheria_a ANCESTRAL SPECIES 3 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00950000184089 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163972 ENSGT00390000004362 ENSGT00440000034744 ENSGT00510000047836 ENSGT00930000150941 ENSGT00940000153541.C Hyrax MODERN SPECIES 1852 RBPJL (ENSPCAG00000000337) ##22 ENSPCAG00000000363 SYS1 (ENSPCAG00000000373) TP53TG5 (ENSPCAG00000000380) Elephant MODERN SPECIES 180 PKIG (ENSLAFG00000028456) ADA (ENSLAFG00000003020) CCN5 (ENSLAFG00000003023) KCNK15 (ENSLAFG00000027600) RIMS4 (ENSLAFG00000011997) YWHAB (ENSLAFG00000029038) PABPC1L (ENSLAFG00000003553) TOMM34 (ENSLAFG00000003560) STK4 (ENSLAFG00000003562) KCNS1 (ENSLAFG00000003564) WFDC5 (ENSLAFG00000027430) ENSLAFG00000021842 ENSLAFG00000018376 SLPI (ENSLAFG00000010926) MATN4 (ENSLAFG00000008138) RBPJL (ENSLAFG00000008148) ##22 SDC4 (ENSLAFG00000008150) SYS1 (ENSLAFG00000008154) TP53TG5 (ENSLAFG00000018728) DBNDD2 (ENSLAFG00000008160) PIGT (ENSLAFG00000000786) EPPIN (ENSLAFG00000015403) ENSLAFG00000025888 WFDC9 (ENSLAFG00000005468) ENSLAFG00000007745 WFDC10A (ENSLAFG00000005284) WFDC10B (ENSLAFG00000007741) ENSLAFG00000008401 ENSLAFG00000003160 ENSLAFG00000032383 DNTTIP1 (ENSLAFG00000003161) Boreoeutheria ANCESTRAL SPECIES 17 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Euarchontoglires ANCESTRAL SPECIES 17 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Primates ANCESTRAL SPECIES 17 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Haplorrhini ANCESTRAL SPECIES 13 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Simiiformes ANCESTRAL SPECIES 18 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Catarrhini ANCESTRAL SPECIES 19 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cercopithecidae ANCESTRAL SPECIES 16 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cercopithecinae ANCESTRAL SPECIES 19 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cercopithecinae_a ANCESTRAL SPECIES 18 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cercopithecinae_b ANCESTRAL SPECIES 12 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cercopithecinae_d ANCESTRAL SPECIES 2 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.b ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 Sooty mangabey MODERN SPECIES 135 CCN5 (ENSCATG00000027475) KCNK15 (ENSCATG00000032698) RIMS4 (ENSCATG00000030559) YWHAB (ENSCATG00000041005) PABPC1L (ENSCATG00000034065) TOMM34 (ENSCATG00000029810) STK4 (ENSCATG00000031683) KCNS1 (ENSCATG00000035789) WFDC5 (ENSCATG00000037942) WFDC12 (ENSCATG00000008472) PI3 (ENSCATG00000033416) ENSCATG00000043356 SEMG2 (ENSCATG00000032248) SLPI (ENSCATG00000039703) MATN4 (ENSCATG00000039573) RBPJL (ENSCATG00000032067) ##22 SDC4 (ENSCATG00000039284) SYS1 (ENSCATG00000034051) TP53TG5 (ENSCATG00000043897) DBNDD2 (ENSCATG00000039410) PIGT (ENSCATG00000029575) WFDC2 (ENSCATG00000031884) SPINT3 (ENSCATG00000043209) ENSCATG00000043423 ENSCATG00000038297 WFDC8 (ENSCATG00000036752) WFDC9 (ENSCATG00000032455) WFDC10A (ENSCATG00000036754) WFDC11 (ENSCATG00000037724) WFDC10B (ENSCATG00000038842) WFDC13 (ENSCATG00000036819) Drill MODERN SPECIES 1241 CCN5 (ENSMLEG00000026099) KCNK15 (ENSMLEG00000031110) RIMS4 (ENSMLEG00000033781) YWHAB (ENSMLEG00000039705) PABPC1L (ENSMLEG00000043139) TOMM34 (ENSMLEG00000033571) STK4 (ENSMLEG00000030790) KCNS1 (ENSMLEG00000040227) WFDC5 (ENSMLEG00000035265) WFDC12 (ENSMLEG00000043515) PI3 (ENSMLEG00000031261) ENSMLEG00000042661 SEMG2 (ENSMLEG00000039123) SLPI (ENSMLEG00000032321) MATN4 (ENSMLEG00000042104) RBPJL (ENSMLEG00000037019) ##22 SDC4 (ENSMLEG00000033097) SYS1 (ENSMLEG00000033215) Olive baboon MODERN SPECIES 7 CCN5 (ENSPANG00000021786) KCNK15 (ENSPANG00000024499) RIMS4 (ENSPANG00000000384) YWHAB (ENSPANG00000004093) PABPC1L (ENSPANG00000018788) TOMM34 (ENSPANG00000024779) STK4 (ENSPANG00000022566) KCNS1 (ENSPANG00000011732) WFDC5 (ENSPANG00000007528) WFDC12 (ENSPANG00000026136) PI3 (ENSPANG00000023203) ENSPANG00000025057 SEMG2 (ENSPANG00000021787) SLPI (ENSPANG00000020369) MATN4 (ENSPANG00000009740) RBPJL (ENSPANG00000024780) ##22 SDC4 (ENSPANG00000043137) SYS1 (ENSPANG00000042818) TP53TG5 (ENSPANG00000011734) DBNDD2 (ENSPANG00000024781) PIGT (ENSPANG00000026137) WFDC2 (ENSPANG00000015717) SPINT3 (ENSPANG00000018564) WFDC6 (ENSPANG00000007530) EPPIN (ENSPANG00000036178) WFDC8 (ENSPANG00000011736) WFDC9 (ENSPANG00000025058) WFDC10A (ENSPANG00000030945) WFDC11 (ENSPANG00000021099) WFDC10B (ENSPANG00000020553) WFDC13 (ENSPANG00000020820) Macaca ANCESTRAL SPECIES 16 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Macaca_a ANCESTRAL SPECIES 18 ENSGT00950000183113.a.b.o ENSGT00940000160207 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c.a ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Rhesus MODERN SPECIES 1 ADA (ENSMMUG00000010603) CCN5 (ENSMMUG00000045256) RIMS4 (ENSMMUG00000050253) YWHAB (ENSMMUG00000013206) PABPC1L (ENSMMUG00000013209) TOMM34 (ENSMMUG00000013211) STK4 (ENSMMUG00000013212) KCNS1 (ENSMMUG00000013214) WFDC5 (ENSMMUG00000013216) WFDC12 (ENSMMUG00000013217) PI3 (ENSMMUG00000063099) ENSMMUG00000062738 SEMG2 (ENSMMUG00000017560) SLPI (ENSMMUG00000050091) MATN4 (ENSMMUG00000003402) RBPJL (ENSMMUG00000003404) ##22 SDC4 (ENSMMUG00000048424) ENSMMUG00000056860 ##29 SYS1 (ENSMMUG00000063632) DBNDD2 (ENSMMUG00000003409) TP53TG5 (ENSMMUG00000003408) PIGT (ENSMMUG00000003410) WFDC2 (ENSMMUG00000002751) SPINT3 (ENSMMUG00000039638) WFDC6 (ENSMMUG00000003809) SPINLW1 (ENSMMUG00000003806) WFDC8 (ENSMMUG00000054508) WFDC9 (ENSMMUG00000062371) WFDC10A (ENSMMUG00000003803) WFDC11 (ENSMMUG00000060335) WFDC10B (ENSMMUG00000063720) Crab-eating macaque MODERN SPECIES 1 CCN5 (ENSMFAG00000036685) RIMS4 (ENSMFAG00000052597) YWHAB (ENSMFAG00000043236) ENSMFAG00000051790 PABPC1L (ENSMFAG00000040365) TOMM34 (ENSMFAG00000042107) STK4 (ENSMFAG00000030410) KCNS1 (ENSMFAG00000053982) WFDC5 (ENSMFAG00000043142) WFDC12 (ENSMFAG00000002898) PI3 (ENSMFAG00000045404) ENSMFAG00000042736 SEMG2 (ENSMFAG00000003613) SLPI (ENSMFAG00000040605) MATN4 (ENSMFAG00000042342) RBPJL (ENSMFAG00000041142) ##22 SDC4 (ENSMFAG00000051697) PIGT (ENSMFAG00000043460) TP53TG5 (ENSMFAG00000043463) WFDC2 (ENSMFAG00000030693) SPINT3 (ENSMFAG00000042089) WFDC6 (ENSMFAG00000001682) EPPIN (ENSMFAG00000000643) WFDC8 (ENSMFAG00000030907) WFDC9 (ENSMFAG00000036538) WFDC10A (ENSMFAG00000045953) WFDC11 (ENSMFAG00000040005) WFDC10B (ENSMFAG00000034127) WFDC13 (ENSMFAG00000001764) SPINT4 (ENSMFAG00000055751) WFDC3 (ENSMFAG00000042167) Pig-tailed macaque MODERN SPECIES 232 ADA (ENSMNEG00000032237) KCNK15 (ENSMNEG00000036591) RIMS4 (ENSMNEG00000036601) YWHAB (ENSMNEG00000038853) PABPC1L (ENSMNEG00000032298) TOMM34 (ENSMNEG00000007455) STK4 (ENSMNEG00000008565) KCNS1 (ENSMNEG00000040885) WFDC5 (ENSMNEG00000039120) WFDC12 (ENSMNEG00000042922) PI3 (ENSMNEG00000033969) ENSMNEG00000040286 SEMG2 (ENSMNEG00000034874) SLPI (ENSMNEG00000032041) MATN4 (ENSMNEG00000040197) RBPJL (ENSMNEG00000036874) ##22 SDC4 (ENSMNEG00000040966) SYS1 (ENSMNEG00000032249) TP53TG5 (ENSMNEG00000035261) DBNDD2 (ENSMNEG00000041743) PIGT (ENSMNEG00000042427) WFDC2 (ENSMNEG00000035443) SPINT3 (ENSMNEG00000038834) WFDC6 (ENSMNEG00000029781) EPPIN (ENSMNEG00000031072) ENSMNEG00000035516 WFDC8 (ENSMNEG00000043495) WFDC10A (ENSMNEG00000030989) WFDC9 (ENSMNEG00000045302) WFDC11 (ENSMNEG00000002643) WFDC10B (ENSMNEG00000041708) Vervet Monkey MODERN SPECIES 11 ENSCSAG00000014188 CCN5 (ENSCSAG00000014192) KCNK15 (ENSCSAG00000014197) RIMS4 (ENSCSAG00000014202) YWHAB (ENSCSAG00000014209) PABPC1L (ENSCSAG00000014242) TOMM34 (ENSCSAG00000014257) STK4 (ENSCSAG00000014271) ENSCSAG00000014275 WFDC5 (ENSCSAG00000014282) WFDC12 (ENSCSAG00000014294) PI3 (ENSCSAG00000014300) SEMG2 (ENSCSAG00000014308) SLPI (ENSCSAG00000014312) MATN4 (ENSCSAG00000014320) RBPJL (ENSCSAG00000014350) ##22 SDC4 (ENSCSAG00000014364) SYS1 (ENSCSAG00000014370) TP53TG5 (ENSCSAG00000014382) DBNDD2 (ENSCSAG00000014390) PIGT (ENSCSAG00000014400) ENSCSAG00000018749 WFDC2 (ENSCSAG00000014404) SPINT3 (ENSCSAG00000014410) ENSCSAG00000014418 EPPIN (ENSCSAG00000014427) WFDC8 (ENSCSAG00000014443) WFDC9 (ENSCSAG00000014453) WFDC10A (ENSCSAG00000014461) WFDC11 (ENSCSAG00000014467) WFDC13 (ENSCSAG00000014472) Rhinopithecus ANCESTRAL SPECIES 51 ENSGT00940000158934 ENSGT01050000245888 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.a ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Golden snub-nosed monkey MODERN SPECIES 2477 KCNK15 (ENSRROG00000039019) RIMS4 (ENSRROG00000040722) ENSRROG00000041971 YWHAB (ENSRROG00000031954) PABPC1L (ENSRROG00000044498) TOMM34 (ENSRROG00000033038) STK4 (ENSRROG00000045126) KCNS1 (ENSRROG00000044954) WFDC5 (ENSRROG00000031148) WFDC12 (ENSRROG00000038861) PI3 (ENSRROG00000038794) ENSRROG00000044747 SEMG2 (ENSRROG00000039656) SLPI (ENSRROG00000028775) MATN4 (ENSRROG00000033905) RBPJL (ENSRROG00000033553) ##22 SDC4 (ENSRROG00000044358) SYS1 (ENSRROG00000025393) TP53TG5 (ENSRROG00000037864) DBNDD2 (ENSRROG00000030955) PIGT (ENSRROG00000035840) WFDC2 (ENSRROG00000036001) SPINT3 (ENSRROG00000045414) ENSRROG00000041749 EPPIN (ENSRROG00000030114) WFDC8 (ENSRROG00000027199) WFDC9 (ENSRROG00000034695) WFDC10A (ENSRROG00000036458) WFDC11 (ENSRROG00000036733) WFDC10B (ENSRROG00000029995) WFDC13 (ENSRROG00000044109) Black snub-nosed monkey MODERN SPECIES 592 ENSRBIG00000027501 ENSRBIG00000006078 YWHAB (ENSRBIG00000041262) PABPC1L (ENSRBIG00000035381) TOMM34 (ENSRBIG00000024161) STK4 (ENSRBIG00000038534) KCNS1 (ENSRBIG00000041589) WFDC5 (ENSRBIG00000036014) WFDC12 (ENSRBIG00000036554) PI3 (ENSRBIG00000025750) ENSRBIG00000041881 SEMG2 (ENSRBIG00000038051) ENSRBIG00000034772 SLPI (ENSRBIG00000036164) MATN4 (ENSRBIG00000031254) RBPJL (ENSRBIG00000042360) ##22 SDC4 (ENSRBIG00000043866) SYS1 (ENSRBIG00000022011) TP53TG5 (ENSRBIG00000044037) DBNDD2 (ENSRBIG00000042541) PIGT (ENSRBIG00000021342) WFDC2 (ENSRBIG00000037385) SPINT3 (ENSRBIG00000029466) ENSRBIG00000030690 EPPIN (ENSRBIG00000026203) WFDC8 (ENSRBIG00000031942) WFDC10A (ENSRBIG00000029259) WFDC9 (ENSRBIG00000028554) WFDC11 (ENSRBIG00000020823) WFDC10B (ENSRBIG00000033084) WFDC13 (ENSRBIG00000014744) Hominoidea ANCESTRAL SPECIES 17 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Gibbon MODERN SPECIES 3 SERINC3 (ENSNLEG00000027258) ADA (ENSNLEG00000006622) CCN5 (ENSNLEG00000006637) KCNK15 (ENSNLEG00000031103) RIMS4 (ENSNLEG00000006640) YWHAB (ENSNLEG00000006643) ENSNLEG00000006653 TOMM34 (ENSNLEG00000006657) STK4 (ENSNLEG00000006664) KCNS1 (ENSNLEG00000006677) WFDC5 (ENSNLEG00000006681) WFDC12 (ENSNLEG00000006683) PI3 (ENSNLEG00000006687) SLPI (ENSNLEG00000006690) ENSNLEG00000006692 ENSNLEG00000006697 ##22 SDC4 (ENSNLEG00000006698) SYS1 (ENSNLEG00000028851) TP53TG5 (ENSNLEG00000006708) ENSNLEG00000006712 PIGT (ENSNLEG00000006720) WFDC2 (ENSNLEG00000006742) SPINT3 (ENSNLEG00000006745) ENSNLEG00000006746 EPPIN (ENSNLEG00000035598) WFDC8 (ENSNLEG00000006749) WFDC10A (ENSNLEG00000006753) WFDC9 (ENSNLEG00000006750) WFDC11 (ENSNLEG00000006756) ENSNLEG00000006759 WFDC13 (ENSNLEG00000006763) Hominidae ANCESTRAL SPECIES 18 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.d ENSGT00940000162560.c.b ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Orangutan MODERN SPECIES 11 ENSPPYG00000011040 RIMS4 (ENSPPYG00000033050) YWHAB (ENSPPYG00000011041) PABPC1L (ENSPPYG00000011042) TOMM34 (ENSPPYG00000011044) STK4 (ENSPPYG00000011045) KCNS1 (ENSPPYG00000011046) WFDC5 (ENSPPYG00000011047) WFDC12 (ENSPPYG00000011048) PI3 (ENSPPYG00000011049) ENSPPYG00000011050 SEMG2 (ENSPPYG00000032101) ENSPPYG00000041042 SLPI (ENSPPYG00000011051) MATN4 (ENSPPYG00000011052) RBPJL (ENSPPYG00000011053) ##22 SDC4 (ENSPPYG00000038657) SYS1 (ENSPPYG00000036501) TP53TG5 (ENSPPYG00000011056) DBNDD2 (ENSPPYG00000011055) PIGT (ENSPPYG00000011057) WFDC2 (ENSPPYG00000030993) SPINT3 (ENSPPYG00000011060) ENSPPYG00000037141 EPPIN (ENSPPYG00000011061) WFDC8 (ENSPPYG00000011062) WFDC9 (ENSPPYG00000011063) WFDC10A (ENSPPYG00000011064) WFDC11 (ENSPPYG00000011065) ENSPPYG00000011066 WFDC13 (ENSPPYG00000036444) Homo/Pan/Gorilla group ANCESTRAL SPECIES 16 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.d ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00910000148558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 Gorilla MODERN SPECIES 11 CCN5 (ENSGGOG00000024218) KCNK15 (ENSGGOG00000013704) RIMS4 (ENSGGOG00000013710) YWHAB (ENSGGOG00000004580) PABPC1L (ENSGGOG00000004584) TOMM34 (ENSGGOG00000003560) STK4 (ENSGGOG00000003234) KCNS1 (ENSGGOG00000042845) ENSGGOG00000003007 WFDC12 (ENSGGOG00000023468) PI3 (ENSGGOG00000027291) ENSGGOG00000041390 SEMG2 (ENSGGOG00000002554) SLPI (ENSGGOG00000016177) MATN4 (ENSGGOG00000004140) RBPJL (ENSGGOG00000004147) ##22 SDC4 (ENSGGOG00000004153) SYS1 (ENSGGOG00000004155) TP53TG5 (ENSGGOG00000004159) ENSGGOG00000004164 PIGT (ENSGGOG00000004168) ENSGGOG00000022433 WFDC2 (ENSGGOG00000004175) SPINT3 (ENSGGOG00000043047) ENSGGOG00000014420 EPPIN (ENSGGOG00000044201) WFDC8 (ENSGGOG00000006521) WFDC9 (ENSGGOG00000007042) WFDC10A (ENSGGOG00000012433) WFDC11 (ENSGGOG00000022748) ENSGGOG00000039808 Homo/Pan group ANCESTRAL SPECIES 17 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.d ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00910000148558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 Pan ANCESTRAL SPECIES 15 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.d ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00910000148558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 Chimpanzee MODERN SPECIES 11 KCNK15 (ENSPTRG00000013527) RIMS4 (ENSPTRG00000013528) YWHAB (ENSPTRG00000013529) PABPC1L (ENSPTRG00000013531) ENSPTRG00000044192 TOMM34 (ENSPTRG00000013532) STK4 (ENSPTRG00000013533) KCNS1 (ENSPTRG00000013534) WFDC5 (ENSPTRG00000013535) WFDC12 (ENSPTRG00000013536) PI3 (ENSPTRG00000013537) SEMG1 (ENSPTRG00000044347) SEMG2 (ENSPTRG00000013538) SLPI (ENSPTRG00000013540) MATN4 (ENSPTRG00000013541) RBPJL (ENSPTRG00000013542) ##22 SDC4 (ENSPTRG00000049711) SYS1 (ENSPTRG00000032508) TP53TG5 (ENSPTRG00000013545) DBNDD2 (ENSPTRG00000013544) PIGT (ENSPTRG00000013547) WFDC2 (ENSPTRG00000013549) SPINT3 (ENSPTRG00000013550) ENSPTRG00000044911 EPPIN (ENSPTRG00000013552) WFDC8 (ENSPTRG00000013553) WFDC9 (ENSPTRG00000013554) WFDC10A (ENSPTRG00000013555) WFDC11 (ENSPTRG00000013557) WFDC10B (ENSPTRG00000013558) WFDC13 (ENSPTRG00000049690) Bonobo MODERN SPECIES 11 CCN5 (ENSPPAG00000036307) KCNK15 (ENSPPAG00000033660) RIMS4 (ENSPPAG00000033892) YWHAB (ENSPPAG00000036479) PABPC1L (ENSPPAG00000039677) TOMM34 (ENSPPAG00000043523) STK4 (ENSPPAG00000027517) KCNS1 (ENSPPAG00000037133) ENSPPAG00000038621 WFDC12 (ENSPPAG00000000101) PI3 (ENSPPAG00000027163) SEMG1 (ENSPPAG00000028529) SEMG2 (ENSPPAG00000029249) SLPI (ENSPPAG00000031762) MATN4 (ENSPPAG00000035708) RBPJL (ENSPPAG00000037289) ##22 SDC4 (ENSPPAG00000026773) SYS1 (ENSPPAG00000039458) TP53TG5 (ENSPPAG00000034658) ENSPPAG00000038202 PIGT (ENSPPAG00000031078) ENSPPAG00000033220 WFDC2 (ENSPPAG00000031602) WFDC6 (ENSPPAG00000032127) EPPIN (ENSPPAG00000032599) WFDC8 (ENSPPAG00000034054) WFDC9 (ENSPPAG00000035545) ENSPPAG00000036261 WFDC11 (ENSPPAG00000040844) WFDC10B (ENSPPAG00000041406) WFDC13 (ENSPPAG00000041514) Human MODERN SPECIES 12 CCN5 (ENSG00000064205) KCNK15 (ENSG00000124249) RIMS4 (ENSG00000101098) YWHAB (ENSG00000166913) PABPC1L (ENSG00000101104) TOMM34 (ENSG00000025772) STK4 (ENSG00000101109) KCNS1 (ENSG00000124134) WFDC5 (ENSG00000175121) WFDC12 (ENSG00000168703) PI3 (ENSG00000124102) SEMG1 (ENSG00000124233) SEMG2 (ENSG00000124157) SLPI (ENSG00000124107) MATN4 (ENSG00000124159) RBPJL (ENSG00000124232) ##22 SDC4 (ENSG00000124145) SYS1 (ENSG00000204070) TP53TG5 (ENSG00000124251) DBNDD2 (ENSG00000244274) PIGT (ENSG00000124155) WFDC2 (ENSG00000101443) SPINT3 (ENSG00000101446) WFDC6 (ENSG00000243543) EPPIN-WFDC6 (ENSG00000249139) EPPIN (ENSG00000101448) WFDC8 (ENSG00000158901) WFDC9 (ENSG00000180205) WFDC10A (ENSG00000180305) WFDC11 (ENSG00000180083) WFDC10B (ENSG00000182931) Platyrrhini ANCESTRAL SPECIES 11 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cebidae ANCESTRAL SPECIES 13 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Cebidae_a ANCESTRAL SPECIES 2 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00940000162560.c.b ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000164575 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Capuchin MODERN SPECIES 132 ENSCCAG00000030625 CCN5 (ENSCCAG00000027495) KCNK15 (ENSCCAG00000033435) RIMS4 (ENSCCAG00000028364) YWHAB (ENSCCAG00000022692) PABPC1L (ENSCCAG00000023338) TOMM34 (ENSCCAG00000030257) STK4 (ENSCCAG00000026660) KCNS1 (ENSCCAG00000028212) WFDC5 (ENSCCAG00000029383) WFDC12 (ENSCCAG00000031110) PI3 (ENSCCAG00000035041) ENSCCAG00000032624 SLPI (ENSCCAG00000022304) MATN4 (ENSCCAG00000029687) RBPJL (ENSCCAG00000024391) ##22 SDC4 (ENSCCAG00000036032) SYS1 (ENSCCAG00000032353) TP53TG5 (ENSCCAG00000001769) DBNDD2 (ENSCCAG00000033524) PIGT (ENSCCAG00000033823) WFDC2 (ENSCCAG00000036793) SPINT3 (ENSCCAG00000030465) WFDC6 (ENSCCAG00000015992) EPPIN (ENSCCAG00000019404) WFDC8 (ENSCCAG00000026355) WFDC9 (ENSCCAG00000028056) WFDC10A (ENSCCAG00000022325) WFDC11 (ENSCCAG00000030414) WFDC10B (ENSCCAG00000021961) WFDC13 (ENSCCAG00000023254) Bolivian squirrel monkey MODERN SPECIES 126 PKIG (ENSSBOG00000022071) ADA (ENSSBOG00000031670) CCN5 (ENSSBOG00000024221) RIMS4 (ENSSBOG00000032430) YWHAB (ENSSBOG00000024289) PABPC1L (ENSSBOG00000009532) TOMM34 (ENSSBOG00000030705) STK4 (ENSSBOG00000029255) KCNS1 (ENSSBOG00000031287) WFDC5 (ENSSBOG00000034340) WFDC12 (ENSSBOG00000024796) PI3 (ENSSBOG00000019375) ENSSBOG00000025821 SLPI (ENSSBOG00000020031) MATN4 (ENSSBOG00000018281) RBPJL (ENSSBOG00000026909) ##22 SDC4 (ENSSBOG00000022591) SYS1 (ENSSBOG00000029820) TP53TG5 (ENSSBOG00000011757) DBNDD2 (ENSSBOG00000032230) PIGT (ENSSBOG00000023153) WFDC2 (ENSSBOG00000029607) SPINT3 (ENSSBOG00000027651) WFDC6 (ENSSBOG00000034917) ENSSBOG00000020902 WFDC8 (ENSSBOG00000025312) WFDC9 (ENSSBOG00000035817) WFDC10A (ENSSBOG00000028019) WFDC10B (ENSSBOG00000033068) WFDC13 (ENSSBOG00000027591) SPINT4 (ENSSBOG00000028317) Marmoset MODERN SPECIES 17 ENSCJAG00000017664 PABPC1L (ENSCJAG00000017628) TOMM34 (ENSCJAG00000017607) STK4 (ENSCJAG00000017580) ENSCJAG00000080912 KCNS1 (ENSCJAG00000017576) WFDC5 (ENSCJAG00000075207) WFDC12 (ENSCJAG00000017567) ENSCJAG00000067403 PI3 (ENSCJAG00000017566) ENSCJAG00000017560 ENSCJAG00000086097 ENSCJAG00000062624 SLPI (ENSCJAG00000017558) MATN4 (ENSCJAG00000017541) RBPJL (ENSCJAG00000017526) ##22 SDC4 (ENSCJAG00000055105) ENSCJAG00000017516 DBNDD2 (ENSCJAG00000017510) TP53TG5 (ENSCJAG00000017512) PIGT (ENSCJAG00000017414) WFDC2 (ENSCJAG00000017405) ENSCJAG00000073105 SPINT3 (ENSCJAG00000017400) WFDC6 (ENSCJAG00000039425) ENSCJAG00000084523 ENSCJAG00000073855 WFDC9 (ENSCJAG00000057692) WFDC10A (ENSCJAG00000046344) WFDC11 (ENSCJAG00000017378) ENSCJAG00000017373 Mas night monkey MODERN SPECIES 1347 CCN5 (ENSANAG00000033264) KCNK15 (ENSANAG00000025827) RIMS4 (ENSANAG00000025921) ENSANAG00000003964 YWHAB (ENSANAG00000028424) PABPC1L (ENSANAG00000026826) TOMM34 (ENSANAG00000035543) STK4 (ENSANAG00000024625) ENSANAG00000033882 KCNS1 (ENSANAG00000037226) PI3 (ENSANAG00000034119) WFDC5 (ENSANAG00000023343) WFDC12 (ENSANAG00000026150) SLPI (ENSANAG00000026261) MATN4 (ENSANAG00000028420) RBPJL (ENSANAG00000021753) ##22 SDC4 (ENSANAG00000036656) SYS1 (ENSANAG00000020351) TP53TG5 (ENSANAG00000019284) DBNDD2 (ENSANAG00000024579) PIGT (ENSANAG00000022161) WFDC2 (ENSANAG00000038197) WFDC6 (ENSANAG00000024484) ENSANAG00000024252 WFDC8 (ENSANAG00000026757) WFDC9 (ENSANAG00000028927) WFDC10A (ENSANAG00000026422) ENSANAG00000014170 WFDC10B (ENSANAG00000031876) WFDC13 (ENSANAG00000035207) ENSANAG00000035755 Tarsier MODERN SPECIES 4285 SLPI (ENSTSYG00000011337) MATN4 (ENSTSYG00000011298) RBPJL (ENSTSYG00000035840) ##22 SDC4 (ENSTSYG00000031873) SYS1 (ENSTSYG00000009093) TP53TG5 (ENSTSYG00000009132) DBNDD2 (ENSTSYG00000013391) PIGT (ENSTSYG00000013398) Strepsirrhini ANCESTRAL SPECIES 12 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Lemuriformes ANCESTRAL SPECIES 10 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Lemuriformes_a ANCESTRAL SPECIES 121 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00530000064218 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 Coquerels sifaka MODERN SPECIES 726 PKIG (ENSPCOG00000019994) ADA (ENSPCOG00000021160) CCN5 (ENSPCOG00000000043) KCNK15 (ENSPCOG00000017144) RIMS4 (ENSPCOG00000018866) YWHAB (ENSPCOG00000027996) PABPC1L (ENSPCOG00000020630) TOMM34 (ENSPCOG00000026632) STK4 (ENSPCOG00000018747) KCNS1 (ENSPCOG00000022498) WFDC5 (ENSPCOG00000017628) WFDC12 (ENSPCOG00000018285) PI3 (ENSPCOG00000019903) SLPI (ENSPCOG00000020689) MATN4 (ENSPCOG00000014393) RBPJL (ENSPCOG00000027026) ##22 SDC4 (ENSPCOG00000023225) SYS1 (ENSPCOG00000023666) TP53TG5 (ENSPCOG00000023205) DBNDD2 (ENSPCOG00000025131) PIGT (ENSPCOG00000026612) WFDC2 (ENSPCOG00000006789) SPINT3 (ENSPCOG00000025172) WFDC8 (ENSPCOG00000010546) ENSPCOG00000022344 MGME1 (ENSPCOG00000015171) OVOL2 (ENSPCOG00000013518) PET117 (ENSPCOG00000016324) KAT14 (ENSPCOG00000019175) Greater bamboo lemur MODERN SPECIES 494 ENSPSMG00000025133 SLPI (ENSPSMG00000025128) MATN4 (ENSPSMG00000025124) RBPJL (ENSPSMG00000025089) ##22 SDC4 (ENSPSMG00000025079) SYS1 (ENSPSMG00000025062) ENSPSMG00000025057 DBNDD2 (ENSPSMG00000025056) PIGT (ENSPSMG00000024987) WFDC2 (ENSPSMG00000024768) ENSPSMG00000024761 ENSPSMG00000024756 Mouse lemur MODERN SPECIES 9 ADA (ENSMICG00000008277) CCN5 (ENSMICG00000028370) KCNK15 (ENSMICG00000008293) RIMS4 (ENSMICG00000042022) YWHAB (ENSMICG00000037501) ENSMICG00000027004 ENSMICG00000000974 TOMM34 (ENSMICG00000032653) ENSMICG00000047226 STK4 (ENSMICG00000000982) KCNS1 (ENSMICG00000000984) WFDC5 (ENSMICG00000046725) WFDC12 (ENSMICG00000000986) PI3 (ENSMICG00000000987) MATN4 (ENSMICG00000014207) RBPJL (ENSMICG00000014225) ##22 SDC4 (ENSMICG00000032459) SYS1 (ENSMICG00000028195) TP53TG5 (ENSMICG00000014268) DBNDD2 (ENSMICG00000031138) PIGT (ENSMICG00000013782) WFDC2 (ENSMICG00000015749) WFDC9 (ENSMICG00000029861) ENSMICG00000032475 ENSMICG00000014327 ENSMICG00000014350 OVOL2 (ENSMICG00000032455) KAT14 (ENSMICG00000014378) ZNF133 (ENSMICG00000010713) DZANK1 (ENSMICG00000010726) POLR3F (ENSMICG00000044519) Bushbaby MODERN SPECIES 138 CCN5 (ENSOGAG00000012555) KCNK15 (ENSOGAG00000012557) RIMS4 (ENSOGAG00000011045) ENSOGAG00000008909 PABPC1L (ENSOGAG00000032999) TOMM34 (ENSOGAG00000008911) STK4 (ENSOGAG00000006656) KCNS1 (ENSOGAG00000025880) WFDC5 (ENSOGAG00000006665) PI3 (ENSOGAG00000006670) ENSOGAG00000034580 ENSOGAG00000024067 SLPI (ENSOGAG00000005681) ENSOGAG00000024142 MATN4 (ENSOGAG00000007290) RBPJL (ENSOGAG00000024900) ##22 SDC4 (ENSOGAG00000007291) SYS1 (ENSOGAG00000025081) TP53TG5 (ENSOGAG00000010381) DBNDD2 (ENSOGAG00000010386) PIGT (ENSOGAG00000010389) ENSOGAG00000010396 ENSOGAG00000028989 WFDC8 (ENSOGAG00000010398) WFDC10B (ENSOGAG00000031773) WFDC13 (ENSOGAG00000004981) SPINT4 (ENSOGAG00000004983) ENSOGAG00000011999 ENSOGAG00000004974 DNTTIP1 (ENSOGAG00000004985) ENSOGAG00000004989 Euarchontoglires_A ANCESTRAL SPECIES 16 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Tree shrew MODERN SPECIES 1050 PI3 (ENSTBEG00000014549) MATN4 (ENSTBEG00000014554) ENSTBEG00000014857 ##22 SDC4 (ENSTBEG00000014967) SYS1 (ENSTBEG00000014984) TP53TG5 (ENSTBEG00000015004) Glires ANCESTRAL SPECIES 17 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Rodentia ANCESTRAL SPECIES 18 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Rodentia_A ANCESTRAL SPECIES 17 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000166702 Sciuridae ANCESTRAL SPECIES 13 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558.l ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000166702 ENSGT00390000012268 Marmotini ANCESTRAL SPECIES 5 ENSGT00940000161921 ENSGT00530000063859.b ENSGT00940000157562 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058.a.a ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558.l ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 ENSGT00940000162961 ENSGT00940000163115 ENSGT00390000012268 ENSGT00390000004362 Marmotini_b ANCESTRAL SPECIES 25 ENSGT00530000063859.b ENSGT00940000157562 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058.a.a ENSGT00940000161058.b ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558.l ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 ENSGT00940000162961 ENSGT00940000163115 ENSGT00390000012268 ENSGT00390000004362 Arctic ground squirrel MODERN SPECIES 380 PPP1R3D (ENSUPAG00010003460) SYCP2 (ENSUPAG00010003434) PHACTR3 (ENSUPAG00010003378) CCN5 (ENSUPAG00010003368) KCNK15 (ENSUPAG00010003360) RIMS4 (ENSUPAG00010003352) YWHAB (ENSUPAG00010003342) PABPC1L (ENSUPAG00010003318) TOMM34 (ENSUPAG00010003301) STK4 (ENSUPAG00010003279) KCNS1 (ENSUPAG00010003273) WFDC5 (ENSUPAG00010003265) ENSUPAG00010003262 SLPI (ENSUPAG00010003258) MATN4 (ENSUPAG00010002967) RBPJL (ENSUPAG00010002946) ##22 SDC4 (ENSUPAG00010002934) ENSUPAG00010002928 TP53TG5 (ENSUPAG00010002919) DBNDD2 (ENSUPAG00010002913) PIGT (ENSUPAG00010002893) ENSUPAG00010002885 WFDC2 (ENSUPAG00010002876) ENSUPAG00010002820 EPPIN (ENSUPAG00010002810) WFDC8 (ENSUPAG00010002767) ENSUPAG00010002754 WFDC9 (ENSUPAG00010002742) ENSUPAG00010002727 ENSUPAG00010002717 ENSUPAG00010002713 Squirrel MODERN SPECIES 114 PHACTR3 (ENSSTOG00000000260) CCN5 (ENSSTOG00000025361) KCNK15 (ENSSTOG00000030351) RIMS4 (ENSSTOG00000022472) YWHAB (ENSSTOG00000003733) PABPC1L (ENSSTOG00000003739) TOMM34 (ENSSTOG00000019477) ENSSTOG00000031644 STK4 (ENSSTOG00000009251) KCNS1 (ENSSTOG00000009257) WFDC5 (ENSSTOG00000030004) ENSSTOG00000023892 ENSSTOG00000031994 SLPI (ENSSTOG00000020296) MATN4 (ENSSTOG00000009281) RBPJL (ENSSTOG00000009296) ##22 SDC4 (ENSSTOG00000009310) SYS1 (ENSSTOG00000009315) TP53TG5 (ENSSTOG00000009319) DBNDD2 (ENSSTOG00000022365) PIGT (ENSSTOG00000009327) WFDC2 (ENSSTOG00000020720) ENSSTOG00000031891 EPPIN (ENSSTOG00000015851) ENSSTOG00000010208 WFDC9 (ENSSTOG00000010219) WFDC11 (ENSSTOG00000015644) ENSSTOG00000031894 DNTTIP1 (ENSSTOG00000006482) UBE2C (ENSSTOG00000006502) TNNC2 (ENSSTOG00000006513) Alpin marmot MODERN SPECIES FAM217B (ENSMMMG00000004800) PPP1R3D (ENSMMMG00000004802) ENSMMMG00000004806 PHACTR3 (ENSMMMG00000004853) CCN5 (ENSMMMG00000004881) KCNK15 (ENSMMMG00000004903) RIMS4 (ENSMMMG00000004946) YWHAB (ENSMMMG00000004966) PABPC1L (ENSMMMG00000004982) ENSMMMG00000005008 STK4 (ENSMMMG00000005028) WFDC5 (ENSMMMG00000005050) ENSMMMG00000005063 SLPI (ENSMMMG00000005081) ENSMMMG00000005088 RBPJL (ENSMMMG00000005104) ##22 SDC4 (ENSMMMG00000005139) ENSMMMG00000005147 TP53TG5 (ENSMMMG00000005172) DBNDD2 (ENSMMMG00000005187) PIGT (ENSMMMG00000005202) ENSMMMG00000005225 WFDC2 (ENSMMMG00000005234) ENSMMMG00000005251 EPPIN (ENSMMMG00000005270) WFDC8 (ENSMMMG00000005282) ENSMMMG00000005311 WFDC9 (ENSMMMG00000005318) WFDC11 (ENSMMMG00000005328) WFDC13 (ENSMMMG00000005335) ENSMMMG00000005342 Eurasian red squirrel MODERN SPECIES 11 SERINC3 (ENSSVLG00005000443) PKIG (ENSSVLG00005000482) ADA (ENSSVLG00005000518) CCN5 (ENSSVLG00005000537) KCNK15 (ENSSVLG00005000558) RIMS4 (ENSSVLG00005000677) YWHAB (ENSSVLG00005000717) PABPC1L (ENSSVLG00005000760) TOMM34 (ENSSVLG00005000832) STK4 (ENSSVLG00005000873) KCNS1 (ENSSVLG00005000907) WFDC5 (ENSSVLG00005000929) ENSSVLG00005000948 SLPI (ENSSVLG00005000965) MATN4 (ENSSVLG00005001050) RBPJL (ENSSVLG00005001140) ##22 SDC4 (ENSSVLG00005001186) SYS1 (ENSSVLG00005001200) TP53TG5 (ENSSVLG00005001221) ENSSVLG00005001244 PIGT (ENSSVLG00005001374) ENSSVLG00005001444 WFDC2 (ENSSVLG00005001464) ENSSVLG00005001494 EPPIN (ENSSVLG00005001541) ENSSVLG00005001559 ENSSVLG00005001583 WFDC9 (ENSSVLG00005001595) ENSSVLG00005001609 WFDC11 (ENSSVLG00005001621) ENSSVLG00005001641 Hystricomorpha ANCESTRAL SPECIES 10 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT01060000253657 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000161212 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00390000018558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00390000012268 ENSGT00390000004362 ENSGT00440000034744 Naked mole-rat female MODERN SPECIES 6 YWHAB (ENSHGLG00000009468) PABPC1L (ENSHGLG00000008434) ENSHGLG00000007105 ENSHGLG00000039220 ENSHGLG00000006762 STK4 (ENSHGLG00000046460) KCNS1 (ENSHGLG00000040822) WFDC5 (ENSHGLG00000048437) ENSHGLG00000004794 ENSHGLG00000050599 ENSHGLG00000045524 ENSHGLG00000037773 ENSHGLG00000048197 ENSHGLG00000009195 MATN4 (ENSHGLG00000008405) RBPJL (ENSHGLG00000018495) ##22 SDC4 (ENSHGLG00000035110) ENSHGLG00000039211 SYS1 (ENSHGLG00000049939) DBNDD2 (ENSHGLG00000015151) ENSHGLG00000046814 ENSHGLG00000009120 ENSHGLG00000037304 ENSHGLG00000048746 WFDC2 (ENSHGLG00000008108) ENSHGLG00000007778 ENSHGLG00000033998 EPPIN (ENSHGLG00000043093) WFDC8 (ENSHGLG00000007455) WFDC9 (ENSHGLG00000006793) SPINT4 (ENSHGLG00000006057) Hystricomorpha_a ANCESTRAL SPECIES 8 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT01060000253657 ENSGT01040000242752 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00390000012268 ENSGT00390000004362 ENSGT00440000034744 ENSGT00730000111454 Guinea pig MODERN SPECIES 45 ADA (ENSCPOG00000006159) CCN5 (ENSCPOG00000034698) KCNK15 (ENSCPOG00000020535) RIMS4 (ENSCPOG00000010692) YWHAB (ENSCPOG00000040129) PABPC1L (ENSCPOG00000013633) TOMM34 (ENSCPOG00000030209) STK4 (ENSCPOG00000013641) KCNS1 (ENSCPOG00000033558) WFDC5 (ENSCPOG00000013648) ENSCPOG00000006664 ENSCPOG00000001819 ENSCPOG00000025237 SLPI (ENSCPOG00000040357) MATN4 (ENSCPOG00000015472) RBPJL (ENSCPOG00000020407) ##22 SDC4 (ENSCPOG00000034683) DBNDD2 (ENSCPOG00000034820) SYS1 (ENSCPOG00000040477) ENSCPOG00000008537 PIGT (ENSCPOG00000026325) WFDC2 (ENSCPOG00000031016) ENSCPOG00000003112 EPPIN (ENSCPOG00000003114) WFDC9 (ENSCPOG00000007400) WFDC13 (ENSCPOG00000006258) SPINT4 (ENSCPOG00000009982) ENSCPOG00000013534 WFDC3 (ENSCPOG00000012800) DNTTIP1 (ENSCPOG00000012801) UBE2C (ENSCPOG00000014102) Hystricomorpha_b ANCESTRAL SPECIES 16 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT01060000253657 ENSGT01040000242752 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00390000004362 ENSGT00730000111454 ENSGT00510000047836 ENSGT00930000150941 Long-tailed chinchilla MODERN SPECIES 152 ADA (ENSCLAG00000011565) CCN5 (ENSCLAG00000010929) KCNK15 (ENSCLAG00000014922) RIMS4 (ENSCLAG00000006510) YWHAB (ENSCLAG00000006020) PABPC1L (ENSCLAG00000005298) TOMM34 (ENSCLAG00000015384) STK4 (ENSCLAG00000010685) KCNS1 (ENSCLAG00000009011) WFDC5 (ENSCLAG00000008235) ENSCLAG00000014442 ENSCLAG00000014366 ENSCLAG00000012295 SLPI (ENSCLAG00000011573) MATN4 (ENSCLAG00000005619) RBPJL (ENSCLAG00000005990) ##22 SDC4 (ENSCLAG00000005503) TP53TG5 (ENSCLAG00000004735) DBNDD2 (ENSCLAG00000009121) PIGT (ENSCLAG00000007833) ENSCLAG00000011392 WFDC2 (ENSCLAG00000008937) ENSCLAG00000006593 EPPIN (ENSCLAG00000005761) WFDC8 (ENSCLAG00000005649) WFDC9 (ENSCLAG00000010391) SPINT4 (ENSCLAG00000009394) WFDC3 (ENSCLAG00000007998) DNTTIP1 (ENSCLAG00000007290) UBE2C (ENSCLAG00000006782) TNNC2 (ENSCLAG00000009092) Degu MODERN SPECIES 78 PKIG (ENSODEG00000016126) ADA (ENSODEG00000015048) KCNK15 (ENSODEG00000015091) RIMS4 (ENSODEG00000015319) ENSODEG00000015183 PABPC1L (ENSODEG00000015482) TOMM34 (ENSODEG00000015098) STK4 (ENSODEG00000015785) ENSODEG00000014539 KCNS1 (ENSODEG00000015313) WFDC5 (ENSODEG00000016171) ENSODEG00000016712 ENSODEG00000015604 ENSODEG00000015395 MATN4 (ENSODEG00000015611) RBPJL (ENSODEG00000014969) ##22 ENSODEG00000015404 SYS1 (ENSODEG00000016063) TP53TG5 (ENSODEG00000015624) DBNDD2 (ENSODEG00000015437) PIGT (ENSODEG00000015184) Rodentia_B ANCESTRAL SPECIES 13 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 Myomorpha ANCESTRAL SPECIES 9 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529 ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 Muroidea ANCESTRAL SPECIES 7 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00950000184089 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00730000114163 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00730000114163 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 ENSGT00390000004362 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00730000114163 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000168232 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 Chinese hamster chok1gshd MODERN SPECIES 195 Tomm34 (ENSCGRG00001023104) Stk4 (ENSCGRG00001003628) Kcns1 (ENSCGRG00001006841) Wfdc5 (ENSCGRG00001007787) Wfdc12 (ENSCGRG00001008335) Wfdc15a (ENSCGRG00001013326) Wfdc15b (ENSCGRG00001013744) ENSCGRG00001014445 ENSCGRG00001014934 ENSCGRG00001015371 Svs6 (ENSCGRG00001015270) ENSCGRG00001015720 Slpi (ENSCGRG00001016280) ENSCGRG00001015495 Matn4 (ENSCGRG00001018392) Rbpjl (ENSCGRG00001020891) ##22 Sdc4 (ENSCGRG00001000552) Sys1 (ENSCGRG00001002260) Trp53tg5 (ENSCGRG00001004068) Dbndd2 (ENSCGRG00001005798) Pigt (ENSCGRG00001009371) ENSCGRG00001011067 Spint3 (ENSCGRG00001011702) Wfdc6a (ENSCGRG00001012194) Eppin (ENSCGRG00001013275) ENSCGRG00001003588 Wfdc6b (ENSCGRG00001004631) ENSCGRG00001006135 Wfdc9 (ENSCGRG00001007538) ENSCGRG00001008538 Wfdc11 (ENSCGRG00001009287) Cricetidae_B ANCESTRAL SPECIES 4 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.a ENSGT01050000248040 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 ENSGT00440000034744 Prairie vole MODERN SPECIES 357 Rims4 (ENSMOCG00000012226) Ywhab (ENSMOCG00000016663) Pabpc1l (ENSMOCG00000013186) Tomm34 (ENSMOCG00000011729) Stk4 (ENSMOCG00000001102) Kcns1 (ENSMOCG00000002049) Wfdc5 (ENSMOCG00000015790) Wfdc12 (ENSMOCG00000014911) Wfdc15a (ENSMOCG00000012402) Wfdc15b (ENSMOCG00000008284) ENSMOCG00000006384 ENSMOCG00000000930 ENSMOCG00000022818 Slpi (ENSMOCG00000001280) Matn4 (ENSMOCG00000017368) Rbpjl (ENSMOCG00000005171) ##22 Sdc4 (ENSMOCG00000021996) Sys1 (ENSMOCG00000020198) Trp53tg5 (ENSMOCG00000019934) Dbndd2 (ENSMOCG00000013116) Pigt (ENSMOCG00000007821) ENSMOCG00000012979 Spint3 (ENSMOCG00000011636) Wfdc6a (ENSMOCG00000021952) Eppin (ENSMOCG00000021754) ENSMOCG00000019436 Wfdc9 (ENSMOCG00000013007) ENSMOCG00000004820 Wfdc11 (ENSMOCG00000005524) Wfdc13 (ENSMOCG00000000255) ENSMOCG00000016284 Northern American deer mouse MODERN SPECIES 17 Kcnk15 (ENSPEMG00000022314) Rims4 (ENSPEMG00000021338) Ywhab (ENSPEMG00000020653) Pabpc1l (ENSPEMG00000020671) Tomm34 (ENSPEMG00000021489) Stk4 (ENSPEMG00000017992) Kcns1 (ENSPEMG00000023781) Wfdc5 (ENSPEMG00000022197) ENSPEMG00000027524 Wfdc15a (ENSPEMG00000022089) Wfdc15b (ENSPEMG00000020446) ENSPEMG00000030891 ENSPEMG00000000222 Slpi (ENSPEMG00000020335) Matn4 (ENSPEMG00000020904) Rbpjl (ENSPEMG00000023591) ##22 Sdc4 (ENSPEMG00000011528) Sys1 (ENSPEMG00000028165) Trp53tg5 (ENSPEMG00000003582) Dbndd2 (ENSPEMG00000030878) Pigt (ENSPEMG00000020782) Wfdc2 (ENSPEMG00000016629) Spint3 (ENSPEMG00000007950) Wfdc6a (ENSPEMG00000023671) Eppin (ENSPEMG00000022830) ENSPEMG00000012227 ENSPEMG00000000022 ENSPEMG00000025571 Wfdc9 (ENSPEMG00000008120) Wfdc10 (ENSPEMG00000021259) Wfdc11 (ENSPEMG00000020966) Murinae ANCESTRAL SPECIES 1 ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00520000057703 ENSGT00730000114163 ENSGT00730000113952 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Mus ANCESTRAL SPECIES 1 ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00520000057703 ENSGT00730000114163 ENSGT00730000113952 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a.k.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Mus_A ANCESTRAL SPECIES ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00520000057703 ENSGT00730000114163 ENSGT00730000113952 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a.k.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00940000162560.a ENSGT00520000057703 ENSGT00730000114163 ENSGT00730000113952 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a.k.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Mouse MODERN SPECIES 11 Tomm34 (ENSMUSG00000018322) Stk4 (ENSMUSG00000018209) Kcns1 (ENSMUSG00000040164) Wfdc5 (ENSMUSG00000040154) Wfdc12 (ENSMUSG00000042845) Wfdc15a (ENSMUSG00000051769) Wfdc15b (ENSMUSG00000018211) Semg1 (ENSMUSG00000040132) Svs3b (ENSMUSG00000050383) Svs4 (ENSMUSG00000016998) Svs3a (ENSMUSG00000017003) Svs6 (ENSMUSG00000017000) Svs5 (ENSMUSG00000017004) Slpi (ENSMUSG00000017002) Matn4 (ENSMUSG00000016995) Rbpjl (ENSMUSG00000017007) ##22 Sdc4 (ENSMUSG00000017009) Sys1 (ENSMUSG00000045503) Trp53tg5 (ENSMUSG00000017720) Dbndd2 (ENSMUSG00000017734) Pigt (ENSMUSG00000017721) Wfdc2 (ENSMUSG00000017723) Spint3 (ENSMUSG00000074596) Wfdc6a (ENSMUSG00000074595) Eppin (ENSMUSG00000017733) Wfdc8 (ENSMUSG00000070533) Wfdc6b (ENSMUSG00000070531) Wfdc16 (ENSMUSG00000070530) Wfdc9 (ENSMUSG00000074594) Wfdc10 (ENSMUSG00000070529) Wfdc11 (ENSMUSG00000078940) Mus_C ANCESTRAL SPECIES ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00390000002529.d ENSGT00390000002529.c ENSGT00940000162560.b ENSGT00520000057703 ENSGT00940000162560.a ENSGT00730000114163 ENSGT00730000113952 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a.k.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d.e ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000156753.d.f ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 spretus MODERN SPECIES 11 Ywhab (MGP_SPRETEiJ_G0025548) Pabpc1l (MGP_SPRETEiJ_G0025549) Tomm34 (MGP_SPRETEiJ_G0025550) Stk4 (MGP_SPRETEiJ_G0025551) Kcns1 (MGP_SPRETEiJ_G0025552) Wfdc5 (MGP_SPRETEiJ_G0025553) Wfdc12 (MGP_SPRETEiJ_G0025554) Wfdc15a (MGP_SPRETEiJ_G0025555) Wfdc15b (MGP_SPRETEiJ_G0025556) Semg1 (MGP_SPRETEiJ_G0025557) Svs4 (MGP_SPRETEiJ_G0025558) Svs6 (MGP_SPRETEiJ_G0025559) Svs5 (MGP_SPRETEiJ_G0025560) Slpi (MGP_SPRETEiJ_G0025561) Matn4 (MGP_SPRETEiJ_G0025562) Rbpjl (MGP_SPRETEiJ_G0025563) ##22 Sdc4 (MGP_SPRETEiJ_G0025564) Sys1 (MGP_SPRETEiJ_G0025565) MGP_SPRETEiJ_G0025566 MGP_SPRETEiJ_G0025567 MGP_SPRETEiJ_G0025568 Trp53tg5 (MGP_SPRETEiJ_G0025569) Dbndd2 (MGP_SPRETEiJ_G0025570) Pigt (MGP_SPRETEiJ_G0025571) Wfdc2 (MGP_SPRETEiJ_G0025572) Spint3 (MGP_SPRETEiJ_G0025573) Eppin (MGP_SPRETEiJ_G0025574) MGP_SPRETEiJ_G0025575 Wfdc16 (MGP_SPRETEiJ_G0025576) Wfdc9 (MGP_SPRETEiJ_G0025577) Wfdc10 (MGP_SPRETEiJ_G0025578) Steppe mouse MODERN SPECIES 3250 Slpi (ENSMSIG00000021343) Matn4 (ENSMSIG00000021378) Rbpjl (ENSMSIG00000021772) ##22 Sdc4 (ENSMSIG00000021846) Sys1 (ENSMSIG00000021858) ENSMSIG00000021870 Dbndd2 (ENSMSIG00000021892) Pigt (ENSMSIG00000021930) Wfdc2 (ENSMSIG00000022015) Spint3 (ENSMSIG00000022055) Wfdc6a (ENSMSIG00000022061) Eppin (ENSMSIG00000022076) Wfdc8 (ENSMSIG00000022101) Wfdc6b (ENSMSIG00000022195) Wfdc16 (ENSMSIG00000022238) Wfdc9 (ENSMSIG00000022249) ENSMSIG00000022262 Wfdc11 (ENSMSIG00000022270) Ryukyu mouse MODERN SPECIES 11 Tomm34 (MGP_CAROLIEiJ_G0024628) Stk4 (MGP_CAROLIEiJ_G0024629) Kcns1 (MGP_CAROLIEiJ_G0024630) Wfdc5 (MGP_CAROLIEiJ_G0024631) Wfdc12 (MGP_CAROLIEiJ_G0024632) Wfdc15a (MGP_CAROLIEiJ_G0024633) Svs6 (MGP_CAROLIEiJ_G0024634) Wfdc15b (MGP_CAROLIEiJ_G0024635) Semg1 (MGP_CAROLIEiJ_G0024636) MGP_CAROLIEiJ_G0024637 MGP_CAROLIEiJ_G0024638 MGP_CAROLIEiJ_G0024639 MGP_CAROLIEiJ_G0024640 Slpi (MGP_CAROLIEiJ_G0024641) Matn4 (MGP_CAROLIEiJ_G0024642) Rbpjl (MGP_CAROLIEiJ_G0024643) ##22 Sdc4 (MGP_CAROLIEiJ_G0024644) Sys1 (MGP_CAROLIEiJ_G0024645) MGP_CAROLIEiJ_G0024646 Trp53tg5 (MGP_CAROLIEiJ_G0024647) Dbndd2 (MGP_CAROLIEiJ_G0024648) Pigt (MGP_CAROLIEiJ_G0024649) Wfdc2 (MGP_CAROLIEiJ_G0024650) Spint3 (MGP_CAROLIEiJ_G0024651) Eppin (MGP_CAROLIEiJ_G0024652) MGP_CAROLIEiJ_G0024653 MGP_CAROLIEiJ_G0024654 MGP_CAROLIEiJ_G0024655 Wfdc16 (MGP_CAROLIEiJ_G0024656) Wfdc9 (MGP_CAROLIEiJ_G0024657) Wfdc10 (MGP_CAROLIEiJ_G0024658) Shrew mouse MODERN SPECIES 16 Tomm34 (MGP_PahariEiJ_G0026072) Stk4 (MGP_PahariEiJ_G0026073) Kcns1 (MGP_PahariEiJ_G0026074) Wfdc5 (MGP_PahariEiJ_G0026075) MGP_PahariEiJ_G0026076 Wfdc15a (MGP_PahariEiJ_G0026077) Wfdc15b (MGP_PahariEiJ_G0026078) Semg1 (MGP_PahariEiJ_G0026079) MGP_PahariEiJ_G0026080 MGP_PahariEiJ_G0026081 Svs4 (MGP_PahariEiJ_G0026082) Svs6 (MGP_PahariEiJ_G0026083) Svs5 (MGP_PahariEiJ_G0026084) Slpi (MGP_PahariEiJ_G0026085) Matn4 (MGP_PahariEiJ_G0026086) Rbpjl (MGP_PahariEiJ_G0026087) ##22 Sdc4 (MGP_PahariEiJ_G0026088) MGP_PahariEiJ_G0026089 MGP_PahariEiJ_G0026090 Trp53tg5 (MGP_PahariEiJ_G0026091) Dbndd2 (MGP_PahariEiJ_G0026092) Pigt (MGP_PahariEiJ_G0026093) Wfdc2 (MGP_PahariEiJ_G0026094) MGP_PahariEiJ_G0026095 Eppin (MGP_PahariEiJ_G0026096) MGP_PahariEiJ_G0026097 Wfdc16 (MGP_PahariEiJ_G0026098) Wfdc9 (MGP_PahariEiJ_G0026099) Wfdc10 (MGP_PahariEiJ_G0026100) Wfdc11 (MGP_PahariEiJ_G0026101) Wfdc13 (MGP_PahariEiJ_G0026102) Rat MODERN SPECIES 13 Wfdc12 (ENSRNOG00000032412) Wfdc15a (ENSRNOG00000053099) Wfdc15b (ENSRNOG00000028779) Semg1 (ENSRNOG00000013776) Svs3b (ENSRNOG00000036782) Svs4 (ENSRNOG00000068526) Svs3a (ENSRNOG00000062737) Svs6 (ENSRNOG00000026346) Svs5 (ENSRNOG00000013834) LOC103690289 (ENSRNOG00000049280) Slpil2 (ENSRNOG00000029508) Slpil3 (ENSRNOG00000046350) Slpil2 (ENSRNOG00000055534) Slpi (ENSRNOG00000046699) Matn4 (ENSRNOG00000014021) Rbpjl (ENSRNOG00000026295) ##22 Sdc4 (ENSRNOG00000014297) Sys1 (ENSRNOG00000014480) Tp53tg5 (ENSRNOG00000026215) Pigt (ENSRNOG00000014690) ENSRNOG00000062366 Wfdc2 (ENSRNOG00000014739) Spint3 (ENSRNOG00000052294) Wfdc6a (ENSRNOG00000042526) Eppin (ENSRNOG00000028908) Wfdc8 (ENSRNOG00000014771) Wfdc6b (ENSRNOG00000031823) Wfdc16 (ENSRNOG00000036777) Wfdc9 (ENSRNOG00000031380) Wfdc10a (ENSRNOG00000026067) ENSRNOG00000065546 Upper Galilee mountains blind mole rat MODERN SPECIES 352 Wfdc15a (ENSNGAG00000023289) Wfdc15b (ENSNGAG00000022511) Slpi (ENSNGAG00000006909) Matn4 (ENSNGAG00000012233) Rbpjl (ENSNGAG00000009023) ##22 Sdc4 (ENSNGAG00000015596) Sys1 (ENSNGAG00000022173) Trp53tg5 (ENSNGAG00000014943) Dbndd2 (ENSNGAG00000023888) Pigt (ENSNGAG00000009106) Wfdc2 (ENSNGAG00000021018) Spint3 (ENSNGAG00000024228) ENSNGAG00000023880 ENSNGAG00000018455 Kangaroo rat MODERN SPECIES 332 Serinc3 (ENSDORG00000004957) Pkig (ENSDORG00000026731) Ada (ENSDORG00000004804) Ccn5 (ENSDORG00000005480) Kcnk15 (ENSDORG00000012778) Rims4 (ENSDORG00000010852) Ywhab (ENSDORG00000030212) Pabpc1l (ENSDORG00000001067) Tomm34 (ENSDORG00000001070) ENSDORG00000027779 Kcns1 (ENSDORG00000027611) Wfdc5 (ENSDORG00000012524) ENSDORG00000027603 Slpi (ENSDORG00000006613) Matn4 (ENSDORG00000001014) Rbpjl (ENSDORG00000001015) ##22 Sdc4 (ENSDORG00000001016) Sys1 (ENSDORG00000015786) Trp53tg5 (ENSDORG00000015787) Dbndd2 (ENSDORG00000028396) Pigt (ENSDORG00000015789) ENSDORG00000015474 ENSDORG00000024434 Eppin (ENSDORG00000016569) Wfdc9 (ENSDORG00000027197) Wfdc13 (ENSDORG00000025513) Wfdc3 (ENSDORG00000011771) ENSDORG00000026076 Dnttip1 (ENSDORG00000011772) ENSDORG00000011774 Tnnc2 (ENSDORG00000011778) Lagomorpha ANCESTRAL SPECIES 38 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787.a ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000168491 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 ENSGT00390000012268 ENSGT00390000004362 Pika MODERN SPECIES 3185 PKIG (ENSOPRG00000011784) ADA (ENSOPRG00000011789) CCN5 (ENSOPRG00000011802) ENSOPRG00000011810 RIMS4 (ENSOPRG00000011827) YWHAB (ENSOPRG00000011836) PABPC1L (ENSOPRG00000011846) TOMM34 (ENSOPRG00000011862) STK4 (ENSOPRG00000011874) KCNS1 (ENSOPRG00000011900) ENSOPRG00000011913 SLPI (ENSOPRG00000011937) MATN4 (ENSOPRG00000011944) RBPJL (ENSOPRG00000011978) ##22 SDC4 (ENSOPRG00000012004) SYS1 (ENSOPRG00000012016) TP53TG5 (ENSOPRG00000012021) DBNDD2 (ENSOPRG00000012034) Rabbit MODERN SPECIES 458 KCNK15 (ENSOCUG00000015707) RIMS4 (ENSOCUG00000015710) YWHAB (ENSOCUG00000003002) ENSOCUG00000003005 ENSOCUG00000034534 TOMM34 (ENSOCUG00000003012) STK4 (ENSOCUG00000003016) KCNS1 (ENSOCUG00000022113) WFDC5 (ENSOCUG00000020941) ENSOCUG00000021444 ENSOCUG00000029148 ENSOCUG00000029033 MATN4 (ENSOCUG00000009079) ENSOCUG00000009087 ##22 SDC4 (ENSOCUG00000009097) SYS1 (ENSOCUG00000009102) ENSOCUG00000009104 DBNDD2 (ENSOCUG00000022929) ENSOCUG00000009109 ENSOCUG00000009529 ENSOCUG00000014266 ENSOCUG00000014275 WFDC8 (ENSOCUG00000014280) WFDC9 (ENSOCUG00000001577) WFDC10A (ENSOCUG00000026017) WFDC11 (ENSOCUG00000027753) WFDC13 (ENSOCUG00000008698) SPINT4 (ENSOCUG00000012161) ENSOCUG00000012165 Laurasiatheria ANCESTRAL SPECIES 17 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Eulipotyphla ANCESTRAL SPECIES 505 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 Hedgehog MODERN SPECIES 2362 ENSEEUG00000013001 RBPJL (ENSEEUG00000013039) ##22 SDC4 (ENSEEUG00000013094) Laurasiatheria_a ANCESTRAL SPECIES 18 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Artiodactyla ANCESTRAL SPECIES 18 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00960000187009 Suina ANCESTRAL SPECIES 9 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT00990000214118 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 Pig MODERN SPECIES 8 KCNK15 (ENSSSCG00000007377) RIMS4 (ENSSSCG00000021453) ENSSSCG00000051506 YWHAB (ENSSSCG00000007381) PABPC1L (ENSSSCG00000007382) TOMM34 (ENSSSCG00000007383) STK4 (ENSSSCG00000030820) KCNS1 (ENSSSCG00000007385) WFDC5 (ENSSSCG00000007384) ENSSSCG00000035053 SPAI-2 (ENSSSCG00000033675) ENSSSCG00000033906 ENSSSCG00000022258 SLPI (ENSSSCG00000039573) MATN4 (ENSSSCG00000007391) RBPJL (ENSSSCG00000037156) ##22 ENSSSCG00000038594 SYS1 (ENSSSCG00000007395) TP53TG5 (ENSSSCG00000037072) DBNDD2 (ENSSSCG00000033586) PIGT (ENSSSCG00000021861) ENSSSCG00000007398 ENSSSCG00000035296 PTI (ENSSSCG00000062723) ENSSSCG00000051240 ENSSSCG00000035724 WFDC2 (ENSSSCG00000033003) ENSSSCG00000043442 ENSSSCG00000039858 EPPIN (ENSSSCG00000033572) WFDC8 (ENSSSCG00000007407) Chacoan peccary MODERN SPECIES 801 ADA (ENSCWAG00000005205) CCN5 (ENSCWAG00000005177) KCNK15 (ENSCWAG00000005153) RIMS4 (ENSCWAG00000005095) YWHAB (ENSCWAG00000005075) PABPC1L (ENSCWAG00000004972) TOMM34 (ENSCWAG00000004944) STK4 (ENSCWAG00000004891) KCNS1 (ENSCWAG00000004858) WFDC5 (ENSCWAG00000004837) PI3 (ENSCWAG00000004809) ENSCWAG00000004793 ENSCWAG00000004755 SLPI (ENSCWAG00000004727) MATN4 (ENSCWAG00000004660) RBPJL (ENSCWAG00000004460) ##22 SDC4 (ENSCWAG00000004425) SYS1 (ENSCWAG00000004386) TP53TG5 (ENSCWAG00000004334) DBNDD2 (ENSCWAG00000004311) PIGT (ENSCWAG00000004048) ENSCWAG00000003963 ENSCWAG00000003936 ENSCWAG00000003915 ENSCWAG00000003889 ENSCWAG00000003825 WFDC2 (ENSCWAG00000012072) ENSCWAG00000011972 EPPIN (ENSCWAG00000011878) WFDC8 (ENSCWAG00000011810) ENSCWAG00000011782 Artiodactyla_a ANCESTRAL SPECIES 16 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT00950000183558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 Artiodactyla_b ANCESTRAL SPECIES 17 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01100000263611 ENSGT01010000222890.a ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Cetacea ANCESTRAL SPECIES 3 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01100000263791.b.a ENSGT00940000168491 ENSGT01010000222890.a.a ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 Odontoceti ANCESTRAL SPECIES 3 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT01100000263791.b.a ENSGT00940000168491 ENSGT01010000222890.a.a ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163115 Odontoceti_a ANCESTRAL SPECIES 3 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT01100000263791.b.a ENSGT01100000263791.b.b ENSGT00940000168491 ENSGT01010000222890.a.a ENSGT00730000111410 ENSGT00940000163688 ENSGT00730000111454 ENSGT00960000192620 Odontoceti_b ANCESTRAL SPECIES 3 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT01100000263791.b.a ENSGT01100000263791.b.b ENSGT00940000168491 ENSGT01010000222890.a.a ENSGT00730000111410 ENSGT00940000163688 ENSGT00730000111454 ENSGT00960000192620 Monodontidae ANCESTRAL SPECIES 1 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106.eb ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00530000064218 ENSGT00390000002529 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00960000193217 ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT01100000263791.b.a ENSGT01100000263791.b.b ENSGT00940000168491 ENSGT01010000222890.a.a ENSGT00730000111410 ENSGT00940000163688 ENSGT00730000111454 ENSGT00960000192620 Narwhal MODERN SPECIES 299 SERINC3 (ENSMMNG00015000816) PKIG (ENSMMNG00015000796) ADA (ENSMMNG00015000760) CCN5 (ENSMMNG00015000721) KCNK15 (ENSMMNG00015000701) RIMS4 (ENSMMNG00015000679) YWHAB (ENSMMNG00015000635) PABPC1L (ENSMMNG00015000580) TOMM34 (ENSMMNG00015000551) STK4 (ENSMMNG00015000516) KCNS1 (ENSMMNG00015000479) ENSMMNG00015000459 ENSMMNG00015000448 SLPI (ENSMMNG00015000429) MATN4 (ENSMMNG00015000341) RBPJL (ENSMMNG00015000222) ##22 SDC4 (ENSMMNG00015000183) TP53TG5 (ENSMMNG00015000138) ENSMMNG00015000084 ENSMMNG00015000040 ENSMMNG00015000029 ENSMMNG00015000017 ENSMMNG00015004251 ENSMMNG00015004240 PIGT (ENSMMNG00015004156) ENSMMNG00015004074 WFDC2 (ENSMMNG00015004049) SPINT3 (ENSMMNG00015004033) ENSMMNG00015004022 UBE2C (ENSMMNG00015003980) TNNC2 (ENSMMNG00015003951) Beluga whale MODERN SPECIES 36 PKIG (ENSDLEG00000002304) ADA (ENSDLEG00000002282) CCN5 (ENSDLEG00000002229) KCNK15 (ENSDLEG00000002212) RIMS4 (ENSDLEG00000002203) YWHAB (ENSDLEG00000002168) ENSDLEG00000002156 ENSDLEG00000002129 TOMM34 (ENSDLEG00000002102) STK4 (ENSDLEG00000002074) KCNS1 (ENSDLEG00000002061) PI3 (ENSDLEG00000002049) ENSDLEG00000001995 SLPI (ENSDLEG00000001986) MATN4 (ENSDLEG00000001812) RBPJL (ENSDLEG00000001689) ##22 SDC4 (ENSDLEG00000001654) ENSDLEG00000001642 TP53TG5 (ENSDLEG00000001614) DBNDD2 (ENSDLEG00000001600) PIGT (ENSDLEG00000001575) ENSDLEG00000001568 ENSDLEG00000001557 ENSDLEG00000001549 ENSDLEG00000001534 ENSDLEG00000001514 WFDC2 (ENSDLEG00000001494) ENSDLEG00000001480 ENSDLEG00000001470 DNTTIP1 (ENSDLEG00000001413) UBE2C (ENSDLEG00000001381) Vaquita MODERN SPECIES 6 PKIG (ENSPSNG00000020022) ADA (ENSPSNG00000019951) CCN5 (ENSPSNG00000019871) KCNK15 (ENSPSNG00000019814) RIMS4 (ENSPSNG00000019738) YWHAB (ENSPSNG00000019638) PABPC1L (ENSPSNG00000019442) TOMM34 (ENSPSNG00000019355) STK4 (ENSPSNG00000019249) KCNS1 (ENSPSNG00000019186) PI3 (ENSPSNG00000019153) ENSPSNG00000019128 ENSPSNG00000019068 SLPI (ENSPSNG00000019012) MATN4 (ENSPSNG00000018933) RBPJL (ENSPSNG00000018538) ##22 SDC4 (ENSPSNG00000018486) SYS1 (ENSPSNG00000018402) TP53TG5 (ENSPSNG00000018337) DBNDD2 (ENSPSNG00000018302) PIGT (ENSPSNG00000016693) ENSPSNG00000016240 ENSPSNG00000016204 ENSPSNG00000016144 ENSPSNG00000016039 WFDC2 (ENSPSNG00000015968) ENSPSNG00000015756 DNTTIP1 (ENSPSNG00000015631) UBE2C (ENSPSNG00000015424) TNNC2 (ENSPSNG00000015194) SNX21 (ENSPSNG00000015039) Dolphin MODERN SPECIES 150 MATN4 (ENSTTRG00000013804) RBPJL (ENSTTRG00000013806) ##22 SDC4 (ENSTTRG00000013809) SYS1 (ENSTTRG00000013810) ENSTTRG00000013811 ENSTTRG00000013812 PIGT (ENSTTRG00000013813) Sperm whale MODERN SPECIES 261 MATN4 (ENSPCTG00005021566) RBPJL (ENSPCTG00005021484) ##22 SDC4 (ENSPCTG00005021443) ENSPCTG00005021401 ENSPCTG00005021355 Blue whale MODERN SPECIES 6 CCN5 (ENSBMSG00010016819) KCNK15 (ENSBMSG00010016788) ENSBMSG00010016718 ENSBMSG00010016679 YWHAB (ENSBMSG00010016643) PABPC1L (ENSBMSG00010016524) TOMM34 (ENSBMSG00010016476) STK4 (ENSBMSG00010016423) KCNS1 (ENSBMSG00010016379) WFDC5 (ENSBMSG00010016363) ENSBMSG00010016348 ENSBMSG00010016332 ENSBMSG00010016298 SLPI (ENSBMSG00010016262) MATN4 (ENSBMSG00010015749) RBPJL (ENSBMSG00010015548) ##22 SDC4 (ENSBMSG00010015518) SYS1 (ENSBMSG00010015473) TP53TG5 (ENSBMSG00010015429) ENSBMSG00010015402 ENSBMSG00010015374 ENSBMSG00010015352 ENSBMSG00010015311 ENSBMSG00010015281 ENSBMSG00010015238 ENSBMSG00010015214 PIGT (ENSBMSG00010014865) WFDC2 (ENSBMSG00010014742) ENSBMSG00010014705 EPPIN (ENSBMSG00010014676) ENSBMSG00010014633 Pecora ANCESTRAL SPECIES 9 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01010000222890.a ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Percora_a ANCESTRAL SPECIES 10 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01030000234995.D.b ENSGT00970000193472.b.a.b.a.a ENSGT00970000193472.b.a.a ENSGT01030000234995.C ENSGT01030000234995.B ENSGT01100000263611.b ENSGT01100000264024 ENSGT01080000257993 ENSGT01100000263611.a Bovidae ANCESTRAL SPECIES 10 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01030000234995.D.a ENSGT01030000234995.B ENSGT01100000263611.b ENSGT01100000264024 ENSGT01080000257993 ENSGT01100000263611.a ENSGT01010000222890.a ENSGT00730000111410 ENSGT00940000156753.d Caprinae ANCESTRAL SPECIES 21 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00940000164331 ENSGT01080000258243 ENSGT01030000234995.D.b ENSGT01030000234995.A ENSGT00970000193472.b.a.b.a.a ENSGT00970000193472.b.a.a.a ENSGT00970000193472.b.a.a.b ENSGT01030000234995.C ENSGT01030000234995.B.c Rambouillet Sheep MODERN SPECIES 4 ADA (ENSOARG00020011138) CCN5 (ENSOARG00020011297) KCNK15 (ENSOARG00020011343) YWHAB (ENSOARG00020011459) PABPC1L (ENSOARG00020011526) TOMM34 (ENSOARG00020011604) STK4 (ENSOARG00020011685) KCNS1 (ENSOARG00020012034) WFDC5 (ENSOARG00020012081) PI3 (ENSOARG00020012128) ENSOARG00020012184 ENSOARG00020012213 ENSOARG00020012272 SLPI (ENSOARG00020012315) MATN4 (ENSOARG00020012415) RBPJL (ENSOARG00020012624) ##22 SDC4 (ENSOARG00020012987) ENSOARG00020013147 DBNDD2 (ENSOARG00020013198) PIGT (ENSOARG00020013290) ENSOARG00020014012 ENSOARG00020014041 ENSOARG00020014088 ENSOARG00020014112 ENSOARG00020014180 TKDP1 (ENSOARG00020014222) ENSOARG00020014313 ENSOARG00020014358 ENSOARG00020014485 ENSOARG00020014534 ENSOARG00020014564 Goat MODERN SPECIES 4 PKIG (ENSCHIG00000022691) ADA (ENSCHIG00000027058) CCN5 (ENSCHIG00000020403) KCNK15 (ENSCHIG00000026668) RIMS4 (ENSCHIG00000015639) YWHAB (ENSCHIG00000015771) PABPC1L (ENSCHIG00000025759) TOMM34 (ENSCHIG00000017546) STK4 (ENSCHIG00000003232) KCNS1 (ENSCHIG00000017367) WFDC5 (ENSCHIG00000003245) ENSCHIG00000013961 ENSCHIG00000019424 ENSCHIG00000012213 MATN4 (ENSCHIG00000016290) RBPJL (ENSCHIG00000011922) ##22 SDC4 (ENSCHIG00000018365) SYS1 (ENSCHIG00000020894) TP53TG5 (ENSCHIG00000024772) DBNDD2 (ENSCHIG00000017333) PIGT (ENSCHIG00000021336) ENSCHIG00000011519 ENSCHIG00000023046 ENSCHIG00000027110 ENSCHIG00000025893 ENSCHIG00000016875 ENSCHIG00000024952 ENSCHIG00000006706 ENSCHIG00000024303 ENSCHIG00000018837 ENSCHIG00000025340 Bovinae ANCESTRAL SPECIES 23 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.d.a.b ENSGT00530000064218.d.b ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00390000017491.t.u.s.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01080000258243 ENSGT00920000150779 ENSGT01030000234995.D.b ENSGT00970000193472.a.b ENSGT00970000193472.b.a.a ENSGT01030000234995.C ENSGT01030000234995.B ENSGT01100000263611.b ENSGT01100000264024 Bos ANCESTRAL SPECIES 24 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.d.a.b ENSGT00530000064218.d.b ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00390000017491.t.u.s.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01080000258243 ENSGT00920000150779 ENSGT01030000234995.D.b ENSGT00970000193472.a.b.a ENSGT00970000193472.b.b ENSGT00970000193472.a.a ENSGT00970000193472.b.a.a ENSGT01030000234995.C ENSGT01030000234995.B Bos_b ANCESTRAL SPECIES 26 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.d.a.b ENSGT00530000064218.d.b ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00390000017491.t.u.s.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01080000258243 ENSGT00920000150779 ENSGT01030000234995.D.b ENSGT00970000193472.a.b.a ENSGT00970000193472.b.b ENSGT00970000193472.a.a ENSGT00970000193472.b.a.a ENSGT01030000234995.C ENSGT01030000234995.B Cow MODERN SPECIES 4 ENSBTAG00000050862 TOMM34 (ENSBTAG00000003256) STK4 (ENSBTAG00000003257) KCNS1 (ENSBTAG00000008870) WFDC5 (ENSBTAG00000030624) ENSBTAG00000020813 ENSBTAG00000039446 ENSBTAG00000051099 ENSBTAG00000046375 PI3 (ENSBTAG00000039028) WFDC15B (ENSBTAG00000051666) ENSBTAG00000014329 SLPI (ENSBTAG00000004148) ENSBTAG00000037925 MATN4 (ENSBTAG00000011279) RBPJL (ENSBTAG00000011283) ##22 SDC4 (ENSBTAG00000015127) SYS1 (ENSBTAG00000005181) TP53TG5 (ENSBTAG00000005184) DBNDD2 (ENSBTAG00000005186) PIGT (ENSBTAG00000016122) SPINT3 (ENSBTAG00000016127) ENSBTAG00000046614 ENSBTAG00000054274 TKDP1 (ENSBTAG00000018122) ENSBTAG00000049036 ENSBTAG00000046704 TKDP4 (ENSBTAG00000013950) TKDP2 (ENSBTAG00000006096) ENSBTAG00000045630 ENSBTAG00000053661 Hybrid Bos Indicus MODERN SPECIES 4 KCNK15 (ENSBIXG00005014826) RIMS4 (ENSBIXG00005002134) ENSBIXG00005014846 YWHAB (ENSBIXG00005014873) PABPC1L (ENSBIXG00005014978) TOMM34 (ENSBIXG00005015011) STK4 (ENSBIXG00005015075) KCNS1 (ENSBIXG00005015095) WFDC5 (ENSBIXG00005015106) ENSBIXG00005015150 ENSBIXG00005015111 ENSBIXG00005015180 ENSBIXG00005015190 ENSBIXG00005015231 MATN4 (ENSBIXG00005015448) RBPJL (ENSBIXG00005002337) ##22 SDC4 (ENSBIXG00005015576) ENSBIXG00005015595 SYS1 (ENSBIXG00005015706) ENSBIXG00005015762 PIGT (ENSBIXG00005016103) ENSBIXG00005016139 ENSBIXG00005016164 ENSBIXG00005016170 ENSBIXG00005016180 ENSBIXG00005016194 ENSBIXG00005016224 ENSBIXG00005016261 ENSBIXG00005016277 ENSBIXG00005000076 ENSBIXG00005016342 Bos_a ANCESTRAL SPECIES 7 ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218.c ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00390000017491.t.u.s.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT01080000258243 ENSGT01030000234995.D.b ENSGT00970000193472.a.b.a ENSGT00970000193472.b.b ENSGT00970000193472.a.a ENSGT00970000193472.b.a.a ENSGT01030000234995.C ENSGT01030000234995.B ENSGT01100000263611.b Wild yak MODERN SPECIES 579 SLPI (ENSBMUG00000021130) MATN4 (ENSBMUG00000021182) RBPJL (ENSBMUG00000021199) ##22 SDC4 (ENSBMUG00000021220) SYS1 (ENSBMUG00000021230) ENSBMUG00000021240 DBNDD2 (ENSBMUG00000021263) PIGT (ENSBMUG00000000109) ENSBMUG00000000128 ENSBMUG00000000177 ENSBMUG00000000212 ENSBMUG00000000230 ENSBMUG00000000239 ENSBMUG00000000495 Domestic yak MODERN SPECIES 3 CCN5 (ENSBGRG00000014245) KCNK15 (ENSBGRG00000014337) RIMS4 (ENSBGRG00000014364) ENSBGRG00000014421 PABPC1L (ENSBGRG00000014538) TOMM34 (ENSBGRG00000015065) STK4 (ENSBGRG00000015183) KCNS1 (ENSBGRG00000010613) WFDC5 (ENSBGRG00000010674) ENSBGRG00000010790 ENSBGRG00000011098 ENSBGRG00000011147 SLPI (ENSBGRG00000011283) ENSBGRG00000011339 MATN4 (ENSBGRG00000011441) RBPJL (ENSBGRG00000011972) ##22 SDC4 (ENSBGRG00000012363) ENSBGRG00000012498 PIGT (ENSBGRG00000012664) ENSBGRG00000014658 ENSBGRG00000014678 ENSBGRG00000014729 ENSBGRG00000014847 ENSBGRG00000014907 ENSBGRG00000014959 ENSBGRG00000015827 ENSBGRG00000015890 ENSBGRG00000016081 ENSBGRG00000016231 ENSBGRG00000016316 ENSBGRG00000016383 American bison MODERN SPECIES 2165 ENSBBBG00000020433 SLPI (ENSBBBG00000005524) ENSBBBG00000020420 MATN4 (ENSBBBG00000000530) RBPJL (ENSBBBG00000020408) ##22 SDC4 (ENSBBBG00000020357) SYS1 (ENSBBBG00000005506) ENSBBBG00000020342 DBNDD2 (ENSBBBG00000020302) PIGT (ENSBBBG00000020278) ENSBBBG00000020055 ENSBBBG00000008611 ENSBBBG00000005087 ENSBBBG00000005100 ENSBBBG00000020048 ENSBBBG00000020037 ENSBBBG00000008390 ENSBBBG00000005408 ENSBBBG00000019992 ENSBBBG00000019981 Siberian musk deer MODERN SPECIES 1198 ADA (ENSMMSG00000018511) CCN5 (ENSMMSG00000018462) KCNK15 (ENSMMSG00000018432) RIMS4 (ENSMMSG00000018389) YWHAB (ENSMMSG00000018362) PABPC1L (ENSMMSG00000018315) TOMM34 (ENSMMSG00000018270) STK4 (ENSMMSG00000018196) KCNS1 (ENSMMSG00000018164) WFDC5 (ENSMMSG00000018142) ENSMMSG00000018108 ENSMMSG00000018079 ENSMMSG00000018060 SLPI (ENSMMSG00000018034) MATN4 (ENSMMSG00000017682) RBPJL (ENSMMSG00000017505) ##22 SDC4 (ENSMMSG00000017471) SYS1 (ENSMMSG00000017409) ENSMMSG00000017390 DBNDD2 (ENSMMSG00000017363) PIGT (ENSMMSG00000016707) ENSMMSG00000016603 ENSMMSG00000016589 Yarkand deer MODERN SPECIES 15 ENSCHYG00000025699 ENSCHYG00000025720 ADA (ENSCHYG00000013810) CCN5 (ENSCHYG00000014072) KCNK15 (ENSCHYG00000014152) RIMS4 (ENSCHYG00000014187) YWHAB (ENSCHYG00000014260) PABPC1L (ENSCHYG00000014358) TOMM34 (ENSCHYG00000014616) STK4 (ENSCHYG00000014698) KCNS1 (ENSCHYG00000014860) ENSCHYG00000014887 ENSCHYG00000014941 SLPI (ENSCHYG00000014988) MATN4 (ENSCHYG00000015128) RBPJL (ENSCHYG00000016031) ##22 SDC4 (ENSCHYG00000016415) ENSCHYG00000016475 ENSCHYG00000016524 ENSCHYG00000016609 DBNDD2 (ENSCHYG00000016669) PIGT (ENSCHYG00000016722) ENSCHYG00000017130 ENSCHYG00000017164 ENSCHYG00000017429 ENSCHYG00000017534 ENSCHYG00000017650 ENSCHYG00000017706 ENSCHYG00000017794 ENSCHYG00000017834 ENSCHYG00000017883 Camelidae ANCESTRAL SPECIES 10 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT01010000222890 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00960000187009 ENSGT00940000162961 Alpaca MODERN SPECIES 1728 YWHAB (ENSVPAG00000005023) ENSVPAG00000005024 STK4 (ENSVPAG00000005025) ENSVPAG00000005026 ENSVPAG00000005027 ENSVPAG00000005028 SLPI (ENSVPAG00000005029) ENSVPAG00000005030 ENSVPAG00000005031 ##22 SDC4 (ENSVPAG00000005032) TP53TG5 (ENSVPAG00000005033) PIGT (ENSVPAG00000005034) Arabian camel MODERN SPECIES 10 PKIG (ENSCDRG00005013493) ADA (ENSCDRG00005013531) CCN5 (ENSCDRG00005013635) KCNK15 (ENSCDRG00005013714) RIMS4 (ENSCDRG00005013755) YWHAB (ENSCDRG00005013807) PABPC1L (ENSCDRG00005013848) TOMM34 (ENSCDRG00005013913) STK4 (ENSCDRG00005013973) WFDC5 (ENSCDRG00005014171) ENSCDRG00005014211 ENSCDRG00005014229 ENSCDRG00005014242 SLPI (ENSCDRG00005014259) MATN4 (ENSCDRG00005014295) RBPJL (ENSCDRG00005014489) ##22 SDC4 (ENSCDRG00005014962) SYS1 (ENSCDRG00005015013) TP53TG5 (ENSCDRG00005015063) DBNDD2 (ENSCDRG00005015115) PIGT (ENSCDRG00005015212) ENSCDRG00005018253 ENSCDRG00005018278 ENSCDRG00005018287 WFDC2 (ENSCDRG00005018307) SPINT3 (ENSCDRG00005018335) ENSCDRG00005018361 EPPIN (ENSCDRG00005018436) WFDC8 (ENSCDRG00005018465) ENSCDRG00005018498 WFDC9 (ENSCDRG00005018518) Laurasiatheria_b ANCESTRAL SPECIES 19 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 ENSGT00940000163115 Carnivora ANCESTRAL SPECIES 20 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Caniformia ANCESTRAL SPECIES ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Caniformia_b ANCESTRAL SPECIES ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 Ursidae ANCESTRAL SPECIES 14 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00440000034744 Ursus ANCESTRAL SPECIES 1 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00950000183087.A.a.a.a.a ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 American black bear MODERN SPECIES 337 ADA (ENSUAMG00000017677) CCN5 (ENSUAMG00000017678) KCNK15 (ENSUAMG00000017679) RIMS4 (ENSUAMG00000017680) YWHAB (ENSUAMG00000017681) PABPC1L (ENSUAMG00000017682) TOMM34 (ENSUAMG00000017683) STK4 (ENSUAMG00000017684) KCNS1 (ENSUAMG00000017686) WFDC5 (ENSUAMG00000017690) PI3 (ENSUAMG00000017692) ENSUAMG00000017693 ENSUAMG00000017694 SLPI (ENSUAMG00000017696) ENSUAMG00000017697 RBPJL (ENSUAMG00000017699) ##22 SDC4 (ENSUAMG00000017703) SYS1 (ENSUAMG00000017704) ENSUAMG00000017705 Polar bear MODERN SPECIES 211 SERINC3 (ENSUMAG00000000095) PKIG (ENSUMAG00000025442) ADA (ENSUMAG00000025440) ENSUMAG00000025439 RIMS4 (ENSUMAG00000025438) YWHAB (ENSUMAG00000025437) PABPC1L (ENSUMAG00000025436) ENSUMAG00000025435 TOMM34 (ENSUMAG00000025434) STK4 (ENSUMAG00000025353) WFDC5 (ENSUMAG00000025324) PI3 (ENSUMAG00000025322) ENSUMAG00000025318 SLPI (ENSUMAG00000025315) MATN4 (ENSUMAG00000025310) RBPJL (ENSUMAG00000025305) ##22 SDC4 (ENSUMAG00000025301) ENSUMAG00000025300 ENSUMAG00000025298 DBNDD2 (ENSUMAG00000025296) PIGT (ENSUMAG00000025184) ENSUMAG00000025175 ENSUMAG00000025174 ENSUMAG00000025173 ENSUMAG00000025172 EPPIN (ENSUMAG00000025171) WFDC8 (ENSUMAG00000025170) WFDC10A (ENSUMAG00000025169) WFDC9 (ENSUMAG00000025168) WFDC11 (ENSUMAG00000025167) WFDC10B (ENSUMAG00000025166) Giant Panda MODERN SPECIES 4 CCN5 (ENSAMEG00000004064) KCNK15 (ENSAMEG00000004071) ENSAMEG00000029879 RIMS4 (ENSAMEG00000004075) YWHAB (ENSAMEG00000004088) PABPC1L (ENSAMEG00000004099) TOMM34 (ENSAMEG00000004125) STK4 (ENSAMEG00000004150) ENSAMEG00000004183 WFDC5 (ENSAMEG00000004189) PI3 (ENSAMEG00000027638) ENSAMEG00000025370 ENSAMEG00000004193 SLPI (ENSAMEG00000004196) MATN4 (ENSAMEG00000004203) RBPJL (ENSAMEG00000004221) ##22 SDC4 (ENSAMEG00000004244) SYS1 (ENSAMEG00000024134) TP53TG5 (ENSAMEG00000004260) DBNDD2 (ENSAMEG00000004265) PIGT (ENSAMEG00000004281) WFDC2 (ENSAMEG00000028485) ENSAMEG00000030843 ENSAMEG00000004313 ENSAMEG00000025216 ENSAMEG00000026937 ENSAMEG00000018938 ENSAMEG00000012494 WFDC13 (ENSAMEG00000012500) SPINT4 (ENSAMEG00000012503) WFDC3 (ENSAMEG00000012504) Mustelinae ANCESTRAL SPECIES 11 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 American mink MODERN SPECIES 7 FAM166C (ENSNVIG00000011066) CIB4 (ENSNVIG00000011050) KCNK3 (ENSNVIG00000011039) RIMS4 (ENSNVIG00000011024) YWHAB (ENSNVIG00000011016) PABPC1L (ENSNVIG00000010962) TOMM34 (ENSNVIG00000010955) STK4 (ENSNVIG00000010914) KCNS1 (ENSNVIG00000010907) ELAF (ENSNVIG00000010904) WFDC5 (ENSNVIG00000010883) ENSNVIG00000010873 ENSNVIG00000010861 SLPI (ENSNVIG00000010853) MATN4 (ENSNVIG00000010816) RBPJL (ENSNVIG00000010764) ##22 SDC4 (ENSNVIG00000010754) SYS1 (ENSNVIG00000010742) TP53TG5 (ENSNVIG00000010705) ENSNVIG00000010679 PIGT (ENSNVIG00000010506) ENSNVIG00000010450 WFDC2 (ENSNVIG00000010427) ENSNVIG00000010424 ENSNVIG00000010415 ENSNVIG00000010412 EPPIN (ENSNVIG00000010399) WFDC8 (ENSNVIG00000010382) WFDC10A (ENSNVIG00000010378) ENSNVIG00000010370 WFDC9 (ENSNVIG00000010359) Ferret MODERN SPECIES 180 PKIG (ENSMPUG00000017665) ADA (ENSMPUG00000017664) CCN5 (ENSMPUG00000017663) KCNK15 (ENSMPUG00000017662) RIMS4 (ENSMPUG00000017661) YWHAB (ENSMPUG00000017660) PABPC1L (ENSMPUG00000017646) TOMM34 (ENSMPUG00000017645) STK4 (ENSMPUG00000017644) KCNS1 (ENSMPUG00000017643) WFDC5 (ENSMPUG00000017642) PI3 (ENSMPUG00000017641) ENSMPUG00000017640 SLPI (ENSMPUG00000017639) MATN4 (ENSMPUG00000017638) RBPJL (ENSMPUG00000017637) ##22 SDC4 (ENSMPUG00000017636) SYS1 (ENSMPUG00000017635) TP53TG5 (ENSMPUG00000017634) DBNDD2 (ENSMPUG00000017633) PIGT (ENSMPUG00000017632) ENSMPUG00000017631 WFDC2 (ENSMPUG00000017630) ENSMPUG00000017629 EPPIN (ENSMPUG00000017628) WFDC8 (ENSMPUG00000017627) ENSMPUG00000017626 ENSMPUG00000017625 WFDC9 (ENSMPUG00000017624) WFDC10B (ENSMPUG00000017623) ENSMPUG00000017622 Canidae ANCESTRAL SPECIES 19 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033.a.a ENSGT00940000166033.b Canis_lupus ANCESTRAL SPECIES 13 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00940000164331 ENSGT00940000168491 ENSGT00940000156753.d ENSGT00940000162037 ENSGT00940000153201.j.m.a.e.a.a.b ENSGT00940000166033.a.a.a ENSGT00940000166033.b ENSGT00940000166033.a.a.b ENSGT00940000163481 ENSGT00940000162961 Dog MODERN SPECIES 16 SERINC3 (ENSCAFG00845013824) TTPAL (ENSCAFG00845013856) ADA (ENSCAFG00845013933) CCN5 (ENSCAFG00845013975) KCNK15 (ENSCAFG00845014007) RIMS4 (ENSCAFG00845014034) PABPC1L (ENSCAFG00845014122) TOMM34 (ENSCAFG00845014214) STK4 (ENSCAFG00845014272) KCNS1 (ENSCAFG00845014326) WFDC5 (ENSCAFG00845014342) PI3 (ENSCAFG00845014356) ENSCAFG00845014374 SLPI (ENSCAFG00845014398) MATN4 (ENSCAFG00845014439) RBPJL (ENSCAFG00845014479) ##22 SDC4 (ENSCAFG00845014521) SYS1 (ENSCAFG00845014556) DBNDD2 (ENSCAFG00845014577) TP53TG5 (ENSCAFG00845014598) PIGT (ENSCAFG00845014772) ENSCAFG00845015024 SPINT3 (ENSCAFG00845015058) WFDC2 (ENSCAFG00845015133) ENSCAFG00845015166 ENSCAFG00845015194 ENSCAFG00845015232 CE10 (ENSCAFG00845015270) ENSCAFG00845015293 ENSCAFG00845015317 ENSCAFG00845015340 Dingo MODERN SPECIES 343 ADA (ENSCAFG00020013741) CCN5 (ENSCAFG00020013807) KCNK15 (ENSCAFG00020013809) RIMS4 (ENSCAFG00020013822) YWHAB (ENSCAFG00020013827) PABPC1L (ENSCAFG00020013828) TOMM34 (ENSCAFG00020013833) STK4 (ENSCAFG00020013837) KCNS1 (ENSCAFG00020013842) ENSCAFG00020013843 PI3 (ENSCAFG00020013847) ENSCAFG00020013849 ENSCAFG00020013850 SLPI (ENSCAFG00020013855) MATN4 (ENSCAFG00020013861) RBPJL (ENSCAFG00020013876) ##22 SDC4 (ENSCAFG00020013897) SYS1 (ENSCAFG00020013899) DBNDD2 (ENSCAFG00020013904) TP53TG5 (ENSCAFG00020013906) PIGT (ENSCAFG00020013909) ENSCAFG00020013913 ENSCAFG00020013918 ENSCAFG00020013924 WFDC8 (ENSCAFG00020013934) ENSCAFG00020013951 ENSCAFG00020013958 ENSCAFG00020013961 ENSCAFG00020013964 ENSCAFG00020013988 WFDC11 (ENSCAFG00020013991) Red fox MODERN SPECIES 28 PKIG (ENSVVUG00000019128) ADA (ENSVVUG00000019108) ENSVVUG00000019097 RIMS4 (ENSVVUG00000019092) YWHAB (ENSVVUG00000019085) PABPC1L (ENSVVUG00000018939) TOMM34 (ENSVVUG00000018918) STK4 (ENSVVUG00000018909) KCNS1 (ENSVVUG00000018906) PI3 (ENSVVUG00000018905) ENSVVUG00000018900 ENSVVUG00000018895 ENSVVUG00000018861 SLPI (ENSVVUG00000018858) MATN4 (ENSVVUG00000018850) RBPJL (ENSVVUG00000018832) ##22 SDC4 (ENSVVUG00000018824) SYS1 (ENSVVUG00000018817) TP53TG5 (ENSVVUG00000018813) DBNDD2 (ENSVVUG00000018809) PIGT (ENSVVUG00000018801) SPINT3 (ENSVVUG00000018799) WFDC2 (ENSVVUG00000018792) ENSVVUG00000018783 ENSVVUG00000018776 WFDC8 (ENSVVUG00000018753) ENSVVUG00000018747 ENSVVUG00000018744 ENSVVUG00000018741 CYP19A1 (ENSVVUG00000018740) TNFAIP8L3 (ENSVVUG00000018736) Felidae ANCESTRAL SPECIES 3 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 ENSGT00390000004362 Panthera ANCESTRAL SPECIES 2 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 ENSGT00390000004362 Tiger MODERN SPECIES 106 HNF4A (ENSPTIG00000012260) TTPAL (ENSPTIG00000017912) SERINC3 (ENSPTIG00000019064) PKIG (ENSPTIG00000019303) ADA (ENSPTIG00000020943) CCN5 (ENSPTIG00000021850) RIMS4 (ENSPTIG00000001213) YWHAB (ENSPTIG00000005867) PABPC1L (ENSPTIG00000006524) TOMM34 (ENSPTIG00000013642) STK4 (ENSPTIG00000014356) WFDC5 (ENSPTIG00000017183) PI3 (ENSPTIG00000017774) SLPI (ENSPTIG00000018088) MATN4 (ENSPTIG00000018650) RBPJL (ENSPTIG00000009327) ##22 SDC4 (ENSPTIG00000010033) SYS1 (ENSPTIG00000010356) TP53TG5 (ENSPTIG00000011043) DBNDD2 (ENSPTIG00000011399) PIGT (ENSPTIG00000015122) ENSPTIG00000002090 WFDC2 (ENSPTIG00000004268) EPPIN (ENSPTIG00000005188) WFDC8 (ENSPTIG00000006507) WFDC9 (ENSPTIG00000006686) WFDC11 (ENSPTIG00000007820) WFDC10B (ENSPTIG00000009615) WFDC13 (ENSPTIG00000009856) SPINT4 (ENSPTIG00000010251) WFDC3 (ENSPTIG00000011730) Panthera_a ANCESTRAL SPECIES 1 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163115 ENSGT00940000163972 ENSGT00390000012268 ENSGT00390000004362 ENSGT00440000034744 leopard MODERN SPECIES 32 PKIG (ENSPPRG00000012484) ADA (ENSPPRG00000013211) CCN5 (ENSPPRG00000013477) KCNK15 (ENSPPRG00000013716) RIMS4 (ENSPPRG00000014748) YWHAB (ENSPPRG00000015113) ENSPPRG00000019327 ENSPPRG00000020242 TOMM34 (ENSPPRG00000021071) STK4 (ENSPPRG00000023623) KCNS1 (ENSPPRG00000023008) WFDC5 (ENSPPRG00000022678) PI3 (ENSPPRG00000000238) SLPI (ENSPPRG00000000698) MATN4 (ENSPPRG00000002358) RBPJL (ENSPPRG00000004271) ##22 SDC4 (ENSPPRG00000004481) SYS1 (ENSPPRG00000005123) TP53TG5 (ENSPPRG00000005986) DBNDD2 (ENSPPRG00000007608) PIGT (ENSPPRG00000012910) ENSPPRG00000008771 ENSPPRG00000013864 EPPIN (ENSPPRG00000014888) WFDC8 (ENSPPRG00000016847) WFDC9 (ENSPPRG00000018316) WFDC11 (ENSPPRG00000020459) WFDC10B (ENSPPRG00000020705) WFDC13 (ENSPPRG00000022539) SPINT4 (ENSPPRG00000023638) WFDC3 (ENSPPRG00000023111) lion MODERN SPECIES 3 ADA (ENSPLOG00000004212) CCN5 (ENSPLOG00000004220) KCNK15 (ENSPLOG00000004228) RIMS4 (ENSPLOG00000004234) YWHAB (ENSPLOG00000004243) PABPC1L (ENSPLOG00000004260) TOMM34 (ENSPLOG00000004286) STK4 (ENSPLOG00000004302) KCNS1 (ENSPLOG00000004316) WFDC5 (ENSPLOG00000004328) PI3 (ENSPLOG00000004339) ENSPLOG00000004342 ENSPLOG00000004364 SLPI (ENSPLOG00000004378) MATN4 (ENSPLOG00000004401) RBPJL (ENSPLOG00000004435) ##22 SDC4 (ENSPLOG00000004449) SYS1 (ENSPLOG00000000107) DBNDD2 (ENSPLOG00000000141) TP53TG5 (ENSPLOG00000000157) PIGT (ENSPLOG00000000212) ENSPLOG00000000276 WFDC2 (ENSPLOG00000000300) ENSPLOG00000000324 WFDC8 (ENSPLOG00000000340) WFDC9 (ENSPLOG00000000353) WFDC11 (ENSPLOG00000000368) WFDC10B (ENSPLOG00000000385) WFDC13 (ENSPLOG00000000399) SPINT4 (ENSPLOG00000000415) ENSPLOG00000000426 Cat MODERN SPECIES 2 ADA (ENSFCAG00000002474) CCN5 (ENSFCAG00000002476) KCNK15 (ENSFCAG00000043965) RIMS4 (ENSFCAG00000041558) YWHAB (ENSFCAG00000011690) PABPC1L (ENSFCAG00000011692) TOMM34 (ENSFCAG00000010096) STK4 (ENSFCAG00000027735) KCNS1 (ENSFCAG00000011694) WFDC5 (ENSFCAG00000036344) PI3 (ENSFCAG00000032979) ENSFCAG00000047805 ENSFCAG00000051145 SLPI (ENSFCAG00000009810) MATN4 (ENSFCAG00000009811) RBPJL (ENSFCAG00000009812) ##22 SDC4 (ENSFCAG00000022046) SYS1 (ENSFCAG00000038429) TP53TG5 (ENSFCAG00000009815) DBNDD2 (ENSFCAG00000039111) PIGT (ENSFCAG00000026095) ENSFCAG00000031762 WFDC2 (ENSFCAG00000040756) ENSFCAG00000053077 ENSFCAG00000009821 WFDC8 (ENSFCAG00000009822) ENSFCAG00000052150 WFDC9 (ENSFCAG00000044444) WFDC11 (ENSFCAG00000046607) WFDC10B (ENSFCAG00000028513) WFDC13 (ENSFCAG00000041034) Laurasiatheria_c ANCESTRAL SPECIES 17 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT01100000263611 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000162961 ENSGT00940000163481 Equus ANCESTRAL SPECIES 8 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00730000111410 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000166033 ENSGT00940000163481 ENSGT00940000162961 ENSGT00940000163115 ENSGT00390000012268 ENSGT00390000004362 Donkey MODERN SPECIES 6 ADA (ENSEASG00005023413) CCN5 (ENSEASG00005023412) KCNK15 (ENSEASG00005024599) RIMS4 (ENSEASG00005025946) YWHAB (ENSEASG00005023409) PABPC1L (ENSEASG00005023408) TOMM34 (ENSEASG00005023405) STK4 (ENSEASG00005023404) KCNS1 (ENSEASG00005023403) WFDC5 (ENSEASG00005025639) PI3 (ENSEASG00005023401) ENSEASG00005023400 ENSEASG00005033385 SLPI (ENSEASG00005029589) MATN4 (ENSEASG00005023397) RBPJL (ENSEASG00005023396) ##22 SDC4 (ENSEASG00005023395) SYS1 (ENSEASG00005023394) ENSEASG00005023391 ENSEASG00005024214 PIGT (ENSEASG00005023390) ENSEASG00005034405 WFDC2 (ENSEASG00005023387) ENSEASG00005023386 ENSEASG00005023385 EPPIN (ENSEASG00005038447) WFDC8 (ENSEASG00005023384) ENSEASG00005037470 WFDC9 (ENSEASG00005023382) WFDC10A (ENSEASG00005028332) WFDC11 (ENSEASG00005030432) Horse MODERN SPECIES 14 ENSECAG00000055761 ADA (ENSECAG00000008358) CCN5 (ENSECAG00000014566) KCNK15 (ENSECAG00000030952) RIMS4 (ENSECAG00000015253) YWHAB (ENSECAG00000020397) PABPC1L (ENSECAG00000022681) TOMM34 (ENSECAG00000020421) STK4 (ENSECAG00000021941) KCNS1 (ENSECAG00000010290) WFDC5 (ENSECAG00000014041) PI3 (ENSECAG00000014295) ENSECAG00000014790 SLPI (ENSECAG00000016161) MATN4 (ENSECAG00000017224) RBPJL (ENSECAG00000035129) ##22 SDC4 (ENSECAG00000036088) SYS1 (ENSECAG00000021199) TP53TG5 (ENSECAG00000023518) DBNDD2 (ENSECAG00000000442) PIGT (ENSECAG00000007294) ENSECAG00000054839 ENSECAG00000002141 ENSECAG00000001476 ENSECAG00000029537 WFDC8 (ENSECAG00000021682) ENSECAG00000022689 WFDC10A (ENSECAG00000022829) WFDC9 (ENSECAG00000022824) WFDC11 (ENSECAG00000040011) WFDC13 (ENSECAG00000041370) Chiroptera ANCESTRAL SPECIES 7 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00390000012268 ENSGT00390000004362 Megabat MODERN SPECIES 309 MATN4 (ENSPVAG00000008745) RBPJL (ENSPVAG00000008751) ##22 SDC4 (ENSPVAG00000008754) SYS1 (ENSPVAG00000008755) TP53TG5 (ENSPVAG00000008757) DBNDD2 (ENSPVAG00000008759) PIGT (ENSPVAG00000008762) Microchiroptera ANCESTRAL SPECIES 6 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00530000064218 ENSGT00390000002529 ENSGT00940000165647 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT01100000263611 ENSGT00730000111410 ENSGT00940000163688 ENSGT00940000156753.d ENSGT00940000156753.c ENSGT00940000162037 ENSGT00940000162961 ENSGT00940000163481 ENSGT00390000012268 ENSGT00390000004362 Microbat MODERN SPECIES 1027 SERINC3 (ENSMLUG00000002266) PKIG (ENSMLUG00000025903) ADA (ENSMLUG00000016178) CCN5 (ENSMLUG00000016186) KCNK15 (ENSMLUG00000016190) RIMS4 (ENSMLUG00000016193) YWHAB (ENSMLUG00000006319) PABPC1L (ENSMLUG00000006324) TOMM34 (ENSMLUG00000006338) STK4 (ENSMLUG00000011799) KCNS1 (ENSMLUG00000011814) WFDC5 (ENSMLUG00000011821) ENSMLUG00000029757 ENSMLUG00000027708 MATN4 (ENSMLUG00000005886) RBPJL (ENSMLUG00000005893) ##22 SDC4 (ENSMLUG00000027652) SYS1 (ENSMLUG00000005907) TP53TG5 (ENSMLUG00000005911) DBNDD2 (ENSMLUG00000005919) PIGT (ENSMLUG00000005929) ENSMLUG00000005941 ENSMLUG00000005945 WFDC8 (ENSMLUG00000005950) WFDC11 (ENSMLUG00000029537) SPINT4 (ENSMLUG00000004326) ENSMLUG00000006704 ENSMLUG00000025830 UBE2C (ENSMLUG00000006715) ENSMLUG00000000248 ENSMLUG00000005510 Greater horseshoe bat MODERN SPECIES 15 PKIG (ENSRFEG00010005891) ADA (ENSRFEG00010005851) CCN5 (ENSRFEG00010005790) KCNK15 (ENSRFEG00010005767) RIMS4 (ENSRFEG00010005743) YWHAB (ENSRFEG00010020781) PABPC1L (ENSRFEG00010020745) ENSRFEG00010020711 STK4 (ENSRFEG00010020658) KCNS1 (ENSRFEG00010020617) WFDC5 (ENSRFEG00010020596) PI3 (ENSRFEG00010020583) ENSRFEG00010020563 ENSRFEG00010020517 MATN4 (ENSRFEG00010020347) RBPJL (ENSRFEG00010020135) ##22 SDC4 (ENSRFEG00010020108) SYS1 (ENSRFEG00010020080) DBNDD2 (ENSRFEG00010019983) ENSRFEG00010019975 PIGT (ENSRFEG00010019456) WFDC2 (ENSRFEG00010019325) ENSRFEG00010019291 ENSRFEG00010019244 EPPIN (ENSRFEG00010019167) WFDC8 (ENSRFEG00010019118) WFDC9 (ENSRFEG00010019089) WFDC10A (ENSRFEG00010019058) WFDC13 (ENSRFEG00010019025) SPINT4 (ENSRFEG00010018998) WFDC3 (ENSRFEG00010018918) Marsupialia ANCESTRAL SPECIES 15 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000158973.b ENSGT00940000158444 Marsupialia_b ANCESTRAL SPECIES 9 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00530000063853.a.a.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000158973.b ENSGT00940000158444 Diprotodontia ANCESTRAL SPECIES 2 ENSGT00940000155407 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00730000111217 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000158973.b ENSGT00940000158444 ENSGT00940000159904 Diprotodontia_a ANCESTRAL SPECIES 2 ENSGT01030000234623.a.a.a.a.a ENSGT00390000002707 ENSGT00950000183113.a.b.k ENSGT00940000160207 ENSGT00940000160902 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000161058 ENSGT00940000159787 ENSGT00940000160096 ENSGT00730000111369 ENSGT00390000012286 ENSGT00970000197098 ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00950000185366 ENSGT00940000160663 ENSGT00940000154347.a ENSGT00390000017387 ENSGT00940000161212 ENSGT00390000018558 ENSGT00950000183558 ENSGT00730000111410 ENSGT00940000158323 ENSGT00390000006780 ENSGT00940000161682 ENSGT00950000182787.E.d.e.b ENSGT00390000015164 ENSGT00940000158973.b ENSGT00940000158444 koala MODERN SPECIES 15 PKIG (ENSPCIG00000009399) ADA (ENSPCIG00000009398) CCN5 (ENSPCIG00000009396) KCNK15 (ENSPCIG00000009395) RIMS4 (ENSPCIG00000009394) PABPC1L (ENSPCIG00000009393) TOMM34 (ENSPCIG00000009391) STK4 (ENSPCIG00000009388) KCNS1 (ENSPCIG00000009386) WFDC5 (ENSPCIG00000009385) ENSPCIG00000009383 ENSPCIG00000009382 ENSPCIG00000009381 ENSPCIG00000037185 MATN4 (ENSPCIG00000008571) RBPJL (ENSPCIG00000035128) ##22 ENSPCIG00000003480 ENSPCIG00000001676 ENSPCIG00000001696 SDC4 (ENSPCIG00000014162) SYS1 (ENSPCIG00000037282) ENSPCIG00000004066 DBNDD2 (ENSPCIG00000032154) ENSPCIG00000007649 PIGT (ENSPCIG00000007641) ELP (ENSPCIG00000031725) ENSPCIG00000009378 ENSPCIG00000009371 POLD2 (ENSPCIG00000009368) MYL7 (ENSPCIG00000009366) GCK (ENSPCIG00000009364) Common wonbat MODERN SPECIES 35 ENSVURG00010001659 CCN5 (ENSVURG00010001722) KCNK15 (ENSVURG00010001733) RIMS4 (ENSVURG00010001755) YWHAB (ENSVURG00010001775) ENSVURG00010001793 ENSVURG00010001835 TOMM34 (ENSVURG00010001880) STK4 (ENSVURG00010001901) KCNS1 (ENSVURG00010001917) WFDC5 (ENSVURG00010001927) ENSVURG00010001948 ENSVURG00010001962 ENSVURG00010001975 MATN4 (ENSVURG00010001996) RBPJL (ENSVURG00010002093) ##22 ENSVURG00010002136 SDC4 (ENSVURG00010002146) SYS1 (ENSVURG00010002162) DBNDD2 (ENSVURG00010002204) PIGT (ENSVURG00010002242) ENSVURG00010002402 ENSVURG00010002410 AEBP1 (ENSVURG00010002418) POLD2 (ENSVURG00010002444) MYL7 (ENSVURG00010002490) GCK (ENSVURG00010002504) YKT6 (ENSVURG00010002526) CAMK2B (ENSVURG00010002584) ENSVURG00010002678 NPC1L1 (ENSVURG00010002742) Wallaby MODERN SPECIES 3145 MATN4 (ENSMEUG00000007984) ENSMEUG00000008000 ##22 Tasmanian devil MODERN SPECIES 1 TTPAL (ENSSHAG00000007741) SERINC3 (ENSSHAG00000007963) PKIG (ENSSHAG00000030230) ADA (ENSSHAG00000009001) CCN5 (ENSSHAG00000009894) KCNK15 (ENSSHAG00000022423) RIMS4 (ENSSHAG00000024691) YWHAB (ENSSHAG00000028661) PABPC1L (ENSSHAG00000011446) TOMM34 (ENSSHAG00000011585) STK4 (ENSSHAG00000011734) KCNS1 (ENSSHAG00000023189) WFDC5 (ENSSHAG00000026620) ENSSHAG00000012755 ENSSHAG00000013164 RBPJL (ENSSHAG00000013207) ##22 ENSSHAG00000022888 SDC4 (ENSSHAG00000013574) SYS1 (ENSSHAG00000021723) ENSSHAG00000028228 ENSSHAG00000013807 DBNDD2 (ENSSHAG00000024992) ENSSHAG00000014175 PIGT (ENSSHAG00000014088) ENSSHAG00000002717 ENSSHAG00000014422 POLD2 (ENSSHAG00000014500) MYL7 (ENSSHAG00000014614) GCK (ENSSHAG00000014686) YKT6 (ENSSHAG00000014984) CAMK2B (ENSSHAG00000015076) Opossum MODERN SPECIES TTPAL (ENSMODG00000016211) SERINC3 (ENSMODG00000016210) ADA (ENSMODG00000016207) ENSMODG00000016206 CCN5 (ENSMODG00000016205) KCNK15 (ENSMODG00000016203) RIMS4 (ENSMODG00000016202) YWHAB (ENSMODG00000016200) PABPC1L (ENSMODG00000016198) TOMM34 (ENSMODG00000016196) STK4 (ENSMODG00000016194) KCNS1 (ENSMODG00000016191) ENSMODG00000016190 ENSMODG00000051289 MATN4 (ENSMODG00000016189) RBPJL (ENSMODG00000016187) ##22 SDC4 (ENSMODG00000042119) SYS1 (ENSMODG00000045438) ENSMODG00000046355 ENSMODG00000050195 DBNDD2 (ENSMODG00000016180) PIGT (ENSMODG00000016178) ENSMODG00000044504 ELP (ENSMODG00000023237) WFDC2 (ENSMODG00000016177) AEBP1 (ENSMODG00000016176) POLD2 (ENSMODG00000016172) MYL7 (ENSMODG00000016168) GCK (ENSMODG00000016167) YKT6 (ENSMODG00000048366) CAMK2B (ENSMODG00000016162) Platypus MODERN SPECIES 19 FITM2 (ENSOANG00000040852) R3HDML (ENSOANG00000002714) HNF4A (ENSOANG00000006363) TTPAL (ENSOANG00000006739) SERINC3 (ENSOANG00000045523) ENSOANG00000044044 ADA (ENSOANG00000009775) CCN5 (ENSOANG00000048718) RIMS4 (ENSOANG00000008896) YWHAB (ENSOANG00000015795) PABPC1L (ENSOANG00000015793) STK4 (ENSOANG00000038733) KCNS1 (ENSOANG00000048955) ENSOANG00000007842 ENSOANG00000020962 RBPJL (ENSOANG00000037392) ##22 SDC4 (ENSOANG00000010559) SYS1 (ENSOANG00000008862) ENSOANG00000045884 ENSOANG00000050196 PIGT (ENSOANG00000036047) ENSOANG00000040664 UNC13C (ENSOANG00000049555) RSL24D1 (ENSOANG00000038127) RAB27A (ENSOANG00000001183) PIGBOS1 (ENSOANG00000045389) PIGB (ENSOANG00000008547) CCPG1 (ENSOANG00000008542) ENSOANG00000040868 DNAAF4 (ENSOANG00000008539) PYGO1 (ENSOANG00000008537) Coelacanth MODERN SPECIES 2514 RBPJL (ENSLACG00000005754) ##22 OSER1 (ENSLACG00000002490) Actinopterygii ANCESTRAL SPECIES 31 ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.b ENSGT00940000161337.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00390000015972 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000155740 ENSGT00940000156368.a ENSGT00940000154468 ENSGT00910000148654 ENSGT00940000160613 Neopterygii ANCESTRAL SPECIES 41 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00940000166842 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000160611 ENSGT00940000155740 Osteoglossocephalai ANCESTRAL SPECIES 1 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000153773.a.b ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.A ENSGT00390000011067.C ENSGT00940000166842 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 Osteoglossiformes ANCESTRAL SPECIES 28 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.eb.a ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00940000157802.l ENSGT00390000003721.d.a.e ENSGT00390000013132 ENSGT00940000166464 ENSGT00940000154791 ENSGT00940000154089.a.c Asian bonytongue MODERN SPECIES 14 ANGPT4 (ENSSFOG00015010626) ENSSFOG00015010618 RIMS4 (ENSSFOG00015031165) YWHAB (ENSSFOG00015010577) tomm34 (ENSSFOG00015010538) cox6c (ENSSFOG00015032358) ENSSFOG00015010491 KCNS1 (ENSSFOG00015010480) ENSSFOG00015010457 ENSSFOG00015031163 ENSSFOG00015027411 ENSSFOG00015010416 or90a1 (ENSSFOG00015004468) ENSSFOG00015004409 matn4 (ENSSFOG00015004356) RBPJL (ENSSFOG00015004306) ##22 oser1 (ENSSFOG00015004285) sdc4 (ENSSFOG00015032117) GDF5 (ENSSFOG00015004232) ENSSFOG00015004250 uqcc1 (ENSSFOG00015004178) fam83c (ENSSFOG00015026139) MMP24 (ENSSFOG00015004122) eif6 (ENSSFOG00015004090) map1lc3a (ENSSFOG00015004071) SEC61A1 (ENSSFOG00015003987) chchd4a (ENSSFOG00015033358) DNAH1 (ENSSFOG00015003735) mapkapk3 (ENSSFOG00015003677) PFKFB4 (ENSSFOG00015003620) arpc4 (ENSSFOG00015003565) P. kingsleyae MODERN SPECIES 60 tomm34 (ENSPKIG00000022953) cox6c (ENSPKIG00000022977) ENSPKIG00000023005 KCNS1 (ENSPKIG00000023046) or90a1 (ENSPKIG00000023064) ENSPKIG00000023081 matn4 (ENSPKIG00000023114) RBPJL (ENSPKIG00000023144) ##22 oser1 (ENSPKIG00000023160) sdc4 (ENSPKIG00000023174) GDF5 (ENSPKIG00000023191) ENSPKIG00000023203 uqcc1 (ENSPKIG00000023227) fam83c (ENSPKIG00000023250) MMP24 (ENSPKIG00000023269) eif6 (ENSPKIG00000023303) map1lc3a (ENSPKIG00000023334) ENSPKIG00000023356 SEC61A1 (ENSPKIG00000023403) chchd4a (ENSPKIG00000023439) ENSPKIG00000023450 DNAH1 (ENSPKIG00000023502) mapkapk3 (ENSPKIG00000023596) Clupeocephala ANCESTRAL SPECIES 7 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000153773.a.b ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00400000024545 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.C ENSGT00940000166842 ENSGT00940000165482 ENSGT00940000160586 ENSGT00940000162210 ENSGT00940000160611 Otomorpha ANCESTRAL SPECIES 119 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000157007.i.a ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000154281 ENSGT00940000156107.e.b ENSGT00950000183080.a.a.e.b.c ENSGT00940000156107.f ENSGT00940000178607 Clupeiformes ANCESTRAL SPECIES 27 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160937 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b ENSGT00940000157106 ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000154281 ENSGT00940000156107.e.b ENSGT00950000183080.a.a.f ENSGT00940000158384.d ENSGT00940000155071.C ENSGT00940000162663 Atlantic herring MODERN SPECIES 21 ENSCHAG00000011172 ENSCHAG00000011189 ENSCHAG00000011197 ENSCHAG00000011248 ENSCHAG00000011267 ENSCHAG00000011299 or90a1 (ENSCHAG00000011309) matn4 (ENSCHAG00000011353) RBPJL (ENSCHAG00000011542) ##22 oser1 (ENSCHAG00000011989) sdc4 (ENSCHAG00000011995) GDF5 (ENSCHAG00000012012) uqcc1 (ENSCHAG00000012054) fam83c (ENSCHAG00000012082) MMP24 (ENSCHAG00000012095) eif6 (ENSCHAG00000012670) ESYT1 (ENSCHAG00000012701) zc3h10 (ENSCHAG00000013378) ENSCHAG00000013385 pa2g4a (ENSCHAG00000013406) ERBB3 (ENSCHAG00000013607) ARF3 (ENSCHAG00000017812) bhlhe40 (ENSCHAG00000017831) ITPR1 (ENSCHAG00000018029) Denticle herring MODERN SPECIES 3 TMEM74B (ENSDCDG00000026309) psmf1 (ENSDCDG00000026308) rspo4 (ENSDCDG00000026307) ANGPT4 (ENSDCDG00000026264) ENSDCDG00000026263 RIMS4 (ENSDCDG00000026262) YWHAB (ENSDCDG00000026259) tomm34 (ENSDCDG00000026257) cox6c (ENSDCDG00000026255) ENSDCDG00000025794 KCNS1 (ENSDCDG00000025770) or90h4 (ENSDCDG00000025767) ENSDCDG00000025766 or90a1 (ENSDCDG00000025765) matn4 (ENSDCDG00000025762) RBPJL (ENSDCDG00000025737) ##22 oser1 (ENSDCDG00000025729) sdc4 (ENSDCDG00000025712) GDF5 (ENSDCDG00000025709) uqcc1 (ENSDCDG00000025703) fam83c (ENSDCDG00000025700) MMP24 (ENSDCDG00000025557) eif6 (ENSDCDG00000025528) ESYT1 (ENSDCDG00000024805) zc3h10 (ENSDCDG00000024787) pa2g4a (ENSDCDG00000024781) ERBB3 (ENSDCDG00000013741) arf3b (ENSDCDG00000013288) bhlhe40 (ENSDCDG00000013282) ENSDCDG00000013280 ENSDCDG00000003598 Otophysi ANCESTRAL SPECIES 15 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b.g.b ENSGT00940000161337.a.a.b.b.g.a ENSGT00940000161337.a.a.b.b.h ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00940000180339 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000165514 ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.`b ENSGT00940000158934 Characiphysae ANCESTRAL SPECIES 124 ENSGT00940000165371.a.d ENSGT00940000155198.B ENSGT00940000164786.a ENSGT00940000165909 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b.h ENSGT00940000161337.a.a.b.b.g.b ENSGT00940000161337.a.a.b.b.g.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00940000180339 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000165514 ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.`b ENSGT00940000158934 Characiphysae_b ANCESTRAL SPECIES 139 ENSGT00940000165371.a.d ENSGT00940000167414 ENSGT00940000155198.B ENSGT00940000164786.a ENSGT00940000165909 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b.h ENSGT00940000161337.a.a.b.b.g.b ENSGT00940000161337.a.a.b.b.g.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00940000176933 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00940000180339 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000165514 ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.`b ENSGT00940000158934 Characoidei ANCESTRAL SPECIES 242 ENSGT00940000165371.a.d ENSGT00940000167414 ENSGT00940000155198.B ENSGT00940000164786.a ENSGT00940000165909 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b.h ENSGT00940000161337.a.a.b.b.g.b ENSGT00940000161337.a.a.b.b.g.a ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 Red-bellied piranha MODERN SPECIES 1030 matn4 (ENSPNAG00000015297) RBPJL (ENSPNAG00000015346) ##22 oser1 (ENSPNAG00000003382) Mexicana tetra MODERN SPECIES 171 STK4 (ENSAMXG00000011183) KCNS1 (ENSAMXG00000040044) ENSAMXG00000025434 ENSAMXG00000038319 ENSAMXG00000025433 or90e2 (ENSAMXG00000011167) ENSAMXG00000011164 ENSAMXG00000038168 or90a1 (ENSAMXG00000032858) or90a1 (ENSAMXG00000035366) ENSAMXG00000031744 ENSAMXG00000032356 ENSAMXG00000011160 matn4 (ENSAMXG00000008058) ENSAMXG00000043315 RBPJL (ENSAMXG00000008068) ##22 Electric eel MODERN SPECIES 85 ENSEEEG00000002157 ENSEEEG00000002161 cntn4 (ENSEEEG00000002241) rhebl1 (ENSEEEG00000002247) ENSEEEG00000002261 KCNS1 (ENSEEEG00000002376) ENSEEEG00000002379 ENSEEEG00000002384 ENSEEEG00000002387 or90e2 (ENSEEEG00000002389) ENSEEEG00000002390 or90a1 (ENSEEEG00000002392) ENSEEEG00000002396 matn4 (ENSEEEG00000002403) RBPJL (ENSEEEG00000002410) ##22 oser1 (ENSEEEG00000002455) sdc4 (ENSEEEG00000002457) GDF5 (ENSEEEG00000002459) uqcc1 (ENSEEEG00000002468) fam83c (ENSEEEG00000002474) MMP24 (ENSEEEG00000002476) eif6 (ENSEEEG00000002482) ENSEEEG00000002489 zc3h10 (ENSEEEG00000002490) cox6c (ENSEEEG00000002492) tomm34 (ENSEEEG00000002493) ywhaba (ENSEEEG00000002495) RIMS4 (ENSEEEG00000002501) ENSEEEG00000002502 ANGPT4 (ENSEEEG00000002504) Channel catfish MODERN SPECIES 2 foxp1 (ENSIPUG00000001094) ENSIPUG00000001179 gpr27 (ENSIPUG00000001194) PROK1 (ENSIPUG00000001210) rybpb (ENSIPUG00000001221) shq1 (ENSIPUG00000001247) gxylt2 (ENSIPUG00000001272) ppp4r2 (ENSIPUG00000001286) pdzrn3 (ENSIPUG00000001304) ENSIPUG00000001347 or90h4 (ENSIPUG00000001395) ENSIPUG00000001400 or90a1 (ENSIPUG00000001407) or90a1 (ENSIPUG00000001430) matn4 (ENSIPUG00000001441) RBPJL (ENSIPUG00000001498) ##22 ENSIPUG00000001509 ENSIPUG00000001523 ripor3 (ENSIPUG00000001543) blcap (ENSIPUG00000001560) TMEM74B (ENSIPUG00000001562) psmf1 (ENSIPUG00000001567) Rims4 (ENSIPUG00000001607) ywhaba (ENSIPUG00000001620) tomm34 (ENSIPUG00000001635) CX6C1 (ENSIPUG00000001681) zc3h10 (ENSIPUG00000001697) ENSIPUG00000001734 eif6 (ENSIPUG00000001948) MMP24 (ENSIPUG00000001993) FAM83C (ENSIPUG00000002046) Cyprinoidei ANCESTRAL SPECIES 2 ENSGT01000000214687 ENSGT00410000025882.a ENSGT01000000214413.b.a.b.b.b ENSGT00990000203619.B.b ENSGT00940000156617.e.a ENSGT00940000157127.a ENSGT00940000155125.a.a ENSGT00530000063849.A.b ENSGT00940000166002 ENSGT00940000161337.a.a.b.b.g.b.d.b ENSGT00940000161337.a.a.b.b.g.b.d.a ENSGT00940000161337.a.a.b.b.g.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000018547 ENSGT00940000160663 ENSGT00940000160455 ENSGT00390000018118 ENSGT00940000160254 ENSGT00940000158315 ENSGT00940000180339 ENSGT00390000015972 ENSGT00940000156561.a.b.b ENSGT00950000182897.A ENSGT00940000165514 ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.`b ENSGT00940000158934 ENSGT00940000166055 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 90 ENSGT00410000025882.a.b ENSGT01000000214413.b.a.b.b.b.s ENSGT00990000203619.B.b.a ENSGT00940000156617.e.a.j ENSGT00940000157127.a.b ENSGT00940000155125.a.a.b.b ENSGT00530000063849.A.b.d ENSGT00940000161337.a.a.b.b.g.b.d.b ENSGT00940000161337.a.a.b.b.g.b.d.a ENSGT00940000161337.a.a.b.b.h ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.g ENSGT00390000005197.b.c ##22 ENSGT00390000018547.b ENSGT00940000160663.f ENSGT00940000160455.f ENSGT00390000018118.b ENSGT00940000160254.a ENSGT00940000158315.f ENSGT00390000015972.n ENSGT00940000156561.a.b.b.c ENSGT00950000182897.A.f ENSGT00940000165514.i ENSGT00940000154697.a.b.dc ENSGT01090000260040.b.a.b.`b.a ENSGT00940000158934.c.b ENSGT00940000166055.b ENSGT00940000160129.b Goldfish MODERN SPECIES 24 mst1 (ENSCARG00000022805) ENSCARG00000022923 C3orf18 (ENSCARG00000022926) gnb1b (ENSCARG00000022932) ENSCARG00000022948 rbm5 (ENSCARG00000022958) SLC38A3 (ENSCARG00000023137) gnai2b (ENSCARG00000023344) inka1b (ENSCARG00000023390) ENSCARG00000023399 ENSCARG00000023404 ENSCARG00000023408 ENSCARG00000023416 ENSCARG00000023423 matn4 (ENSCARG00000023447) RBPJL (ENSCARG00000023673) ##22 oser1 (ENSCARG00000023722) sdc4 (ENSCARG00000023734) GDF5 (ENSCARG00000023740) uqcc1 (ENSCARG00000023770) fam83c (ENSCARG00000023796) MMP24 (ENSCARG00000023807) eif6 (ENSCARG00000023851) ENSCARG00000023907 zc3h10 (ENSCARG00000024789) cox6c (ENSCARG00000024800) tomm34 (ENSCARG00000024811) ywhaba (ENSCARG00000024825) RIMS4 (ENSCARG00000026573) ENSCARG00000026606 ANGPT4 (ENSCARG00000026612) Cyprininae_a ANCESTRAL SPECIES 68 ENSGT00940000157086.b.g ENSGT00390000005197.b.c ##22 ENSGT00390000018547.b ENSGT00940000160663.f ENSGT00940000160455.f ENSGT00390000018118.a.b ENSGT00940000160254.a ENSGT00940000158315.f ENSGT00390000015972.n ENSGT00940000156561.a.b.b.c ENSGT00950000182897.A.f ENSGT00940000165514.i ENSGT00940000154697.a.b.dc ENSGT01090000260040.b.a.b.`b.a ENSGT00940000158934.c.a ENSGT00940000166055.b ENSGT00940000160129.b Common carp reference MODERN SPECIES 16 ENSCCRG00000069170 ENSCCRG00000025684 gnb1b (ENSCCRG00000049743) ENSCCRG00000078783 rbm5 (ENSCCRG00000071867) ENSCCRG00000082135 gnai2b (ENSCCRG00000057063) inka1b (ENSCCRG00000009778) ENSCCRG00000080248 ENSCCRG00000071130 ENSCCRG00000069802 ENSCCRG00000069111 ENSCCRG00000009791 ENSCCRG00000077265 matn4 (ENSCCRG00000008192) ENSCCRG00000026258 ##22 oser1 (ENSCCRG00000077821) sdc4 (ENSCCRG00000059213) GDF5 (ENSCCRG00000077836) uqcc1 (ENSCCRG00000004003) fam83c (ENSCCRG00000063114) ENSCCRG00000077722 eif6 (ENSCCRG00000029003) ENSCCRG00000029570 cox6c (ENSCCRG00000033105) tomm34 (ENSCCRG00000033113) ywhaba (ENSCCRG00000033122) ENSCCRG00000021420 ENSCCRG00000021422 ANGPT4 (ENSCCRG00000021432) rspo4 (ENSCCRG00000034445) Golden-line barbel MODERN SPECIES 93 mst1 (ENSSGRG00000023522) C3orf18 (ENSSGRG00000023520) gnb1b (ENSSGRG00000023324) ENSSGRG00000023323 rbm5 (ENSSGRG00000023322) SLC38A3 (ENSSGRG00000022589) gnai2b (ENSSGRG00000021975) inka1b (ENSSGRG00000021956) ENSSGRG00000021955 or90b1 (ENSSGRG00000021954) or90b2 (ENSSGRG00000021953) ENSSGRG00000021952 ENSSGRG00000021951 ENSSGRG00000021950 matn4 (ENSSGRG00000021948) RBPJL (ENSSGRG00000021946) ##22 oser1 (ENSSGRG00000021945) sdc4 (ENSSGRG00000021944) GDF5 (ENSSGRG00000021942) uqcc1 (ENSSGRG00000021941) fam83c (ENSSGRG00000021940) MMP24 (ENSSGRG00000021938) ENSSGRG00000021936 ENSSGRG00000021796 ENSSGRG00000021787 zc3h10 (ENSSGRG00000021777) Cyprininae ANCESTRAL SPECIES 9 ENSGT00940000159388.b ENSGT00940000159461.b ENSGT01000000214687.a ENSGT00410000025882.a.a ENSGT01000000214413.b.a.b.b.b.t ENSGT00990000203619.B.b.b ENSGT00940000156617.e.a.i ENSGT00940000157127.a.a ENSGT00940000155125.a.a.b.a ENSGT00530000063849.A.b.c ENSGT00940000166002.m ENSGT00940000161337.a.a.b.b.g.b.c ENSGT00940000161337.a.a.b.b.g.a.a.b.a ENSGT00940000161337.a.a.a.a ENSGT00940000157086.b.h ENSGT00390000005197.b.d ##22 ENSGT00390000018547.a ENSGT00940000160663.e ENSGT00940000160455.e ENSGT00390000018118.a ENSGT00940000160254.b ENSGT00940000158315.e ENSGT00390000015972.m ENSGT00940000156561.a.b.b.d ENSGT00950000182897.A.e ENSGT00940000165514.j ENSGT00940000154697.a.b.ec ENSGT01090000260040.b.a.b.`b.b ENSGT00940000158934.d ENSGT00940000166055.a.a ENSGT00940000160129.a Cyprininae_a ANCESTRAL SPECIES 20 ENSGT00940000159388.b ENSGT00940000159461.b ENSGT01000000214687.a ENSGT00410000025882.a.a ENSGT01000000214413.b.a.b.b.b.t ENSGT00990000203619.B.b.b ENSGT00940000156617.e.a.i ENSGT00940000157127.a.a ENSGT00940000155125.a.a.b.a ENSGT00530000063849.A.b.c ENSGT00940000166002.m ENSGT00940000161337.a.a.b.b.g.b.c ENSGT00940000161337.a.a.b.b.g.a.a.b.a ENSGT00940000161337.a.a.a.a ENSGT00940000157086.b.h ENSGT00390000005197.b.d ##22 ENSGT00390000018547.a ENSGT00940000160663.e ENSGT00940000160455.e ENSGT00390000018118.a.a ENSGT00940000160254.b ENSGT00940000158315.e ENSGT00390000015972.m ENSGT00940000156561.a.b.b.d ENSGT00950000182897.A.e ENSGT00940000154697.a.b.ec ENSGT01090000260040.b.a.b.`b.b ENSGT00940000158934.d ENSGT00940000166055.a.a ENSGT00940000160129.a ENSGT00940000160937.a.a Golden-line barbel MODERN SPECIES 201 mst1 (ENSSGRG00000049529) abhd14b (ENSSGRG00000049551) C3orf18 (ENSSGRG00000049555) gnb1b (ENSSGRG00000049560) ENSSGRG00000049693 rbm5 (ENSSGRG00000049694) SLC38A3 (ENSSGRG00000049825) gnai2b (ENSSGRG00000050009) inka1b (ENSSGRG00000050188) ENSSGRG00000050189 ENSSGRG00000050439 ENSSGRG00000050440 or90b1 (ENSSGRG00000050441) or90a1 (ENSSGRG00000050442) matn4 (ENSSGRG00000050443) RBPJL (ENSSGRG00000050449) ##22 ENSSGRG00000050453 oser1 (ENSSGRG00000050455) sdc4 (ENSSGRG00000050457) GDF5 (ENSSGRG00000050458) uqcc1 (ENSSGRG00000050461) fam83c (ENSSGRG00000050465) MMP24 (ENSSGRG00000050468) eif6 (ENSSGRG00000050471) ENSSGRG00000050484 zc3h10 (ENSSGRG00000050485) tomm34 (ENSSGRG00000050487) ywhaba (ENSSGRG00000050489) RIMS4 (ENSSGRG00000050539) ENSSGRG00000050540 ENSSGRG00000050541 Common carp reference MODERN SPECIES 10 ENSCCRG00000080976 gnb1b (ENSCCRG00000049758) ENSCCRG00000049745 rbm5 (ENSCCRG00000049748) ENSCCRG00000000237 gnai2b (ENSCCRG00000017881) inka1b (ENSCCRG00000017480) ENSCCRG00000017441 ENSCCRG00000056108 ENSCCRG00000056178 or90b1 (ENSCCRG00000071081) or90e2 (ENSCCRG00000081029) ENSCCRG00000019346 ENSCCRG00000080841 matn4 (ENSCCRG00000026148) ENSCCRG00000070585 ##22 oser1 (ENSCCRG00000026129) sdc4 (ENSCCRG00000053752) GDF5 (ENSCCRG00000026137) uqcc1 (ENSCCRG00000053764) fam83c (ENSCCRG00000004706) ENSCCRG00000062337 eif6 (ENSCCRG00000069389) ENSCCRG00000041367 zc3h10 (ENSCCRG00000076929) ENSCCRG00000041400 tomm34 (ENSCCRG00000041406) ywhaba (ENSCCRG00000073960) ENSCCRG00000041458 ENSCCRG00000041472 ANGPT4 (ENSCCRG00000041490) Zebrafish MODERN SPECIES 21 or90b1 (ENSDARG00000044704) or90d3 (ENSDARG00000105789) ENSDARG00000055467 ENSDARG00000093273 ENSDARG00000091877 ENSDARG00000105838 or137-9 (ENSDARG00000105681) or90e2 (ENSDARG00000105736) ENSDARG00000105705 or90b2 (ENSDARG00000070344) ENSDARG00000094030 ENSDARG00000087254 or90a1 (ENSDARG00000070341) ENSDARG00000099958 matn4 (ENSDARG00000015947) RBPJL (ENSDARG00000074148) ##22 ENSDARG00000099370 oser1 (ENSDARG00000024669) sdc4 (ENSDARG00000059906) GDF5 (ENSDARG00000002760) uqcc1 (ENSDARG00000068176) fam83c (ENSDARG00000075296) MMP24 (ENSDARG00000018896) ENSDARG00000096319 eif6 (ENSDARG00000020232) ENSDARG00000014239 zc3h10 (ENSDARG00000030335) cox6c (ENSDARG00000038577) tomm34 (ENSDARG00000001557) ywhaba (ENSDARG00000013078) RIMS4 (ENSDARG00000059523) Euteleosteomorpha ANCESTRAL SPECIES 16 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.y.b ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 Protacanthopterygii ANCESTRAL SPECIES 31 ENSGT00530000063880.a ENSGT00390000012257 ENSGT00940000160129 ENSGT00940000166055 ENSGT00940000158934 ENSGT01090000260040.b.a.b.z ENSGT00940000154697.a.b ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 Salmoninae ANCESTRAL SPECIES 20 ENSGT00940000166842.c ENSGT00940000162210.c.a ENSGT00940000160611.l ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.i ENSGT00390000005197.b ##22 ENSGT00940000165514.h ENSGT00940000154697.a.b.yb ENSGT01090000260040.b.a.b.z.a ENSGT00940000160129 ENSGT00530000063880.a.g ENSGT00390000014105.d ENSGT00940000153717.a.b ENSGT00940000158986.a ENSGT00940000153649.A.z ENSGT01040000241001 ENSGT00950000183202.a.a ENSGT00940000155326.a.a.a ENSGT00390000014941.j ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b.a Huchen MODERN SPECIES 23 ENSHHUG00000022013 GDF5 (ENSHHUG00000022025) ENSHHUG00000022074 uqcc1 (ENSHHUG00000022077) MMP24 (ENSHHUG00000022083) EIF6 (ENSHHUG00000022111) ENSHHUG00000022115 ENSHHUG00000022118 ENSHHUG00000022125 st3gal8 (ENSHHUG00000022170) cpne1 (ENSHHUG00000022191) rbm12 (ENSHHUG00000022724) ENSHHUG00000022730 ENSHHUG00000022738 matn4 (ENSHHUG00000022740) RBPJL (ENSHHUG00000022747) ##22 cox6c (ENSHHUG00000022765) tomm34 (ENSHHUG00000022783) YWHAB (ENSHHUG00000022789) ENSHHUG00000022851 ENSHHUG00000022880 TMEM74B (ENSHHUG00000022889) blcap (ENSHHUG00000022893) ripor3 (ENSHHUG00000022917) ENSHHUG00000022983 ENSHHUG00000022998 ENSHHUG00000023004 ENSHHUG00000023009 ENSHHUG00000023017 ENSHHUG00000023034 rbl1 (ENSHHUG00000023039) Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000154468.tb.a.c ENSGT00940000160663.a ENSGT00940000160455.a ENSGT00400000024545 ENSGT00390000018118.f ENSGT00940000158315 ENSGT00390000015972.o.b ENSGT00390000011067.C ENSGT00940000166842.c ENSGT00940000162210.c.a ENSGT00940000160611.l ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.i ENSGT00390000005197.b ##22 ENSGT00940000165514.h ENSGT00940000154697.a.b.yb ENSGT01090000260040.b.a.b.z.a ENSGT00940000160129 ENSGT00530000063880.a.g ENSGT00390000014105.d ENSGT00940000153717.a.b ENSGT00940000158986.a ENSGT00950000183202.a.a ENSGT00940000155326.a.a.a ENSGT00390000014941.j ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b.a ENSGT00940000155285.a.d ENSGT00530000063113.B.e Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000157084.e.a.`b.b ENSGT00950000182898.a.a.a.a.b.g.c ENSGT00940000159084.lb.a.a ENSGT00940000160455.a ENSGT00400000024545 ENSGT00390000018118.f ENSGT00940000158315 ENSGT00390000015972.p ENSGT00390000011067.C ENSGT00940000166842.c ENSGT00940000162210.c.a ENSGT00940000160611.l ENSGT01000000219474 ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.i ENSGT00390000005197.b ##22 ENSGT00940000165514.h ENSGT00940000154697.a.b.yb ENSGT01090000260040.b.a.b.z.a ENSGT00940000160129 ENSGT00530000063880.a.g ENSGT00390000014105.d ENSGT00940000153717.a.b ENSGT00940000158986.a ENSGT00950000183202.a.a ENSGT00940000155326.a.a.b ENSGT00390000014941.j ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b.a ENSGT00940000155285.a.d ENSGT00530000063113.B.e Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000157084.e.a.`b.b ENSGT00950000182898.a.a.a.a.b.g.c ENSGT00940000159084.lb.a.a ENSGT00940000160455.a ENSGT00400000024545 ENSGT00390000018118.f ENSGT00940000158315 ENSGT00390000015972.o.b ENSGT00390000011067.C ENSGT00940000166842.c ENSGT00940000162210.c.a ENSGT00940000160611.l ENSGT01000000219474 ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.i ENSGT00390000005197.b ##22 ENSGT00940000165514.h ENSGT00940000154697.a.b.yb ENSGT01090000260040.b.a.b.z.a ENSGT00940000160129 ENSGT00530000063880.a.g ENSGT00390000014105.d ENSGT00940000153717.a.b ENSGT00940000158986.a ENSGT00950000183202.a.a ENSGT00940000155326.a.a.b ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b.a ENSGT00940000155285.a.d ENSGT00530000063113.B.e ENSGT00390000005315 Chinook salmon MODERN SPECIES 11 SLC29A1 (ENSOTSG00005046383) sult6b1 (ENSOTSG00005025482) GDF5 (ENSOTSG00005025483) ENSOTSG00005025484 ENSOTSG00005025485 uqcc1 (ENSOTSG00005025486) MMP24 (ENSOTSG00005025492) ENSOTSG00005026196 ENSOTSG00005026200 st3gal8 (ENSOTSG00005026203) cpne1 (ENSOTSG00005026208) rbm12 (ENSOTSG00005026243) ENSOTSG00005026244 ENSOTSG00005026245 matn4 (ENSOTSG00005026248) RBPJL (ENSOTSG00005026252) ##22 cox6c (ENSOTSG00005026256) tomm34 (ENSOTSG00005026258) YWHAB (ENSOTSG00005026259) ANGPT4 (ENSOTSG00005026261) TMEM74B (ENSOTSG00005026262) blcap (ENSOTSG00005026263) ripor3 (ENSOTSG00005026267) ENSOTSG00005026298 rbl1 (ENSOTSG00005026780) ENSOTSG00005027631 osgn1 (ENSOTSG00005027633) mtss1 (ENSOTSG00005027638) mych (ENSOTSG00005027643) ergic3 (ENSOTSG00005027645) romo1 (ENSOTSG00005027649) Coho salmon MODERN SPECIES ENSOKIG00005006508 ENSOKIG00005006492 ENSOKIG00005006481 GDF5 (ENSOKIG00005006455) ENSOKIG00005006451 MMP24 (ENSOKIG00005005726) eif6 (ENSOKIG00005016420) ENSOKIG00005016414 st3gal8 (ENSOKIG00005016411) ENSOKIG00005016406 CPNE1 (ENSOKIG00005015861) ENSOKIG00005015810 RBM12 (ENSOKIG00005015803) ENSOKIG00005015794 MATN4 (ENSOKIG00005015783) RBPJL (ENSOKIG00005015736) ##22 cox6c (ENSOKIG00005015724) ENSOKIG00005015707 YWHAB (ENSOKIG00005015674) ENSOKIG00005015659 TMEM74B (ENSOKIG00005015652) blcap (ENSOKIG00005015645) ripor3 (ENSOKIG00005015600) ENSOKIG00005015015 rbl1 (ENSOKIG00005014566) PTPRT (ENSOKIG00005006771) osgn1 (ENSOKIG00005006448) mtss1 (ENSOKIG00005006437) mych (ENSOKIG00005006426) romo1 (ENSOKIG00005006412) ergic3 (ENSOKIG00005006265) Rainbow trout MODERN SPECIES 8 ENSOMYG00000069002 ENSOMYG00000019232 ENSOMYG00000052104 ENSOMYG00000019244 ENSOMYG00000055483 ENSOMYG00000019432 if6 (ENSOMYG00000020201) ENSOMYG00000020208 ENSOMYG00000020218 ENSOMYG00000042868 ENSOMYG00000020315 ENSOMYG00000073537 ENSOMYG00000020554 ENSOMYG00000020557 ENSOMYG00000020567 ENSOMYG00000020586 ##22 ENSOMYG00000020598 ENSOMYG00000020610 ENSOMYG00000020616 ENSOMYG00000020626 ENSOMYG00000020655 ENSOMYG00000053969 ENSOMYG00000020662 blcap (ENSOMYG00000020671) ripor3 (ENSOMYG00000020701) ENSOMYG00000048068 ENSOMYG00000052627 ENSOMYG00000072181 ENSOMYG00000021012 rbl1 (ENSOMYG00000068667) ENSOMYG00000021751 Salmo ANCESTRAL SPECIES 62 ENSGT00940000154468.tb.a.c ENSGT00940000160663.a ENSGT00940000160455.a ENSGT00990000210957 ENSGT00940000158315 ENSGT00390000015972.o.b ENSGT00390000011067.C ENSGT00940000166842.c ENSGT00940000162210.c.a ENSGT00940000160611.l.a ENSGT00940000161337.a.a.b.a ENSGT00940000157086.b.i ENSGT00390000005197.b ##22 ENSGT00940000165514.h ENSGT00940000154697.a.b.yb ENSGT01090000260040.b.a.b.z.a ENSGT00940000160129 ENSGT00530000063880.a.g ENSGT00390000014105.d ENSGT00940000153717.a.b ENSGT00940000158986.a ENSGT00950000183202.a.a ENSGT00940000155326.a.a.a ENSGT00390000014941.j ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b.a ENSGT00940000155285.a.d ENSGT00530000063113.B.e River trout MODERN SPECIES 5 sult6b1 (ENSSTUG00000034093) ENSSTUG00000034082 ENSSTUG00000034079 GDF5 (ENSSTUG00000034075) ENSSTUG00000034060 MMP24 (ENSSTUG00000033593) eif6 (ENSSTUG00000033562) ENSSTUG00000033549 st3gal8 (ENSSTUG00000033542) cpne1 (ENSSTUG00000028473) rbm12 (ENSSTUG00000028328) rbm12 (ENSSTUG00000028316) ENSSTUG00000028315 ENSSTUG00000028303 matn4 (ENSSTUG00000028287) RBPJL (ENSSTUG00000028267) ##22 cox6c (ENSSTUG00000028253) tomm34 (ENSSTUG00000028244) YWHAB (ENSSTUG00000028213) ENSSTUG00000028182 ENSSTUG00000028161 TMEM74B (ENSSTUG00000028149) blcap (ENSSTUG00000028133) ripor3 (ENSSTUG00000027974) ENSSTUG00000026904 rbl1 (ENSSTUG00000025860) PTPRT (ENSSTUG00000016288) pigu (ENSSTUG00000015794) osgn1 (ENSSTUG00000015785) mtss1 (ENSSTUG00000015755) mych (ENSSTUG00000015740) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000111067 ENSSSAG00000093873 ENSSSAG00000077808 ENSSSAG00000092342 ENSSSAG00000049874 ENSSSAG00000049883 ENSSSAG00000107335 if6 (ENSSSAG00000052795) ENSSSAG00000097779 ENSSSAG00000052810 ENSSSAG00000052815 ENSSSAG00000097892 ENSSSAG00000096333 ENSSSAG00000088675 ENSSSAG00000064143 ENSSSAG00000064166 ##22 cox6c (ENSSSAG00000064179) OM34 (ENSSSAG00000064189) ENSSSAG00000064193 ENSSSAG00000064206 ENSSSAG00000085419 ENSSSAG00000101054 blcap (ENSSSAG00000085147) fam65c (ENSSSAG00000064240) ENSSSAG00000064285 rbl1 (ENSSSAG00000064675) ENSSSAG00000067053 ENSSSAG00000010098 pigu (ENSSSAG00000096653) osgn1 (ENSSSAG00000088836) mtss1 (ENSSSAG00000075740) Northern pike MODERN SPECIES 16 dynlrb1 (ENSELUG00000014305) EIF6 (ENSELUG00000030843) ENSELUG00000014378 MMP24 (ENSELUG00000014430) ENSELUG00000029908 ENSELUG00000024875 uqcc1 (ENSELUG00000014439) GDF5 (ENSELUG00000030444) sdc4 (ENSELUG00000024761) oser1 (ENSELUG00000031563) ENSELUG00000027052 matn4 (ENSELUG00000014678) RBPJL (ENSELUG00000014753) ##22 ENSELUG00000014775 KCNS1 (ENSELUG00000014788) ENSELUG00000025602 ENSELUG00000026475 ENSELUG00000015008 cox6c (ENSELUG00000031848) tomm34 (ENSELUG00000015048) ENSELUG00000015055 YWHAB (ENSELUG00000026166) RIMS4 (ENSELUG00000015103) ENSELUG00000015111 ENSELUG00000020959 ENSELUG00000033721 psmf1 (ENSELUG00000021015) TMEM74B (ENSELUG00000004447) Acanthomorphata ANCESTRAL SPECIES 71 ENSGT00950000182846.a.a.b.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000176379 ENSGT00940000164287 ENSGT00390000006658.a.a ENSGT00950000183156.a.b.b.b.b.b ENSGT00940000155285.a ENSGT00390000005315 ENSGT00530000063113.B ENSGT00390000012445.b ENSGT00940000157601 ENSGT00940000176173 ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000015972 Euacanthomorphacea ANCESTRAL SPECIES 72 ENSGT00390000018016 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C Percomorphaceae ANCESTRAL SPECIES 33 ENSGT00390000017740.a.b ENSGT00940000153393.B ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Percomorphaceae_B ANCESTRAL SPECIES 3 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Ovalentaria ANCESTRAL SPECIES 2 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 Atherinomorphae ANCESTRAL SPECIES 2 ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 Cyprinodontiformes ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 Aplocheiloidei ANCESTRAL SPECIES 10 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b.b ENSGT00940000161337.a.a.b.a.a.a.b.a ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 ENSGT00950000182991.A.a.c.a.a ENSGT00950000182986.a.a Mangrove rivulus MODERN SPECIES 154 dnase1l4.2 (ENSKMAG00000018822) sec13 (ENSKMAG00000018858) cand2 (ENSKMAG00000018896) ENSKMAG00000018974 ENSKMAG00000018996 cox6c (ENSKMAG00000019033) ENSKMAG00000019063 KCNS1 (ENSKMAG00000019110) ENSKMAG00000019142 ENSKMAG00000019207 ENSKMAG00000019238 ENSKMAG00000019265 ENSKMAG00000019280 ENSKMAG00000019291 matn4 (ENSKMAG00000019309) RBPJL (ENSKMAG00000019383) ##22 DOCK3 (ENSKMAG00000019604) DCAF1 (ENSKMAG00000019924) ENSKMAG00000019963 cept1b (ENSKMAG00000019973) dram2b (ENSKMAG00000020006) zgc:162255 (ENSKMAG00000020018) nfs1 (ENSKMAG00000020040) cpne1 (ENSKMAG00000020080) ENSKMAG00000020143 ENSKMAG00000020209 st3gal8 (ENSKMAG00000020246) ENSKMAG00000020262 REM1 (ENSKMAG00000020277) pnp4a (ENSKMAG00000020292) trib3 (ENSKMAG00000020319) Turquoise killifish MODERN SPECIES 1619 ANGPT4 (ENSNFUG00015009293) cox6c (ENSNFUG00015009243) ENSNFUG00015009234 STK4 (ENSNFUG00015008858) KCNS1 (ENSNFUG00015008815) ENSNFUG00015008805 ENSNFUG00015008796 ENSNFUG00015008791 ENSNFUG00015008786 ENSNFUG00015008779 ENSNFUG00015008774 ENSNFUG00015008770 ENSNFUG00015008768 ENSNFUG00015008764 MATN4 (ENSNFUG00015008717) RBPJL (ENSNFUG00015008704) ##22 ENSNFUG00015008701 DOCK3 (ENSNFUG00015008207) ENSNFUG00015008146 DCAF1 (ENSNFUG00015008034) ENSNFUG00015008013 ENSNFUG00015008011 CEPT1B (ENSNFUG00015007973) DRAM2 (ENSNFUG00015007960) C22H6ORF89 (ENSNFUG00015007956) PMEPA1 (ENSNFUG00015007953) pck1 (ENSNFUG00015007950) ENSNFUG00015007946 CABZ01095157.1 (ENSNFUG00015007943) ENSNFUG00015007937 TRIB3 (ENSNFUG00015007934) Cyprinodontoidei ANCESTRAL SPECIES 4 ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b.j ENSGT00940000161337.a.a.b.a.a.b.i ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b ENSGT00940000160613 Poeciliinae ANCESTRAL SPECIES 4 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b.j ENSGT00940000161337.a.a.b.a.a.b.i ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b.l ENSGT00940000161337.a.a.b.a.a.a.a.b.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b.k ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000164656.b.b.a.a.a.b ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b Poecilia ANCESTRAL SPECIES 25 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b.j ENSGT00940000161337.a.a.b.a.a.b.i ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b.l ENSGT00940000161337.a.a.b.a.a.a.a.b.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b.k ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00940000164656.b.b.a.a.a.b ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000165482 ENSGT00940000166842 ENSGT00940000163873.c.b NAME_6 ANCESTRAL SPECIES 164 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b.j ENSGT00940000161337.a.a.b.a.a.b.i ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.a.a ENSGT00940000161337.a.a.b.a.a.a.a.b.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b.k.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b.l ENSGT00940000161337.a.a.b.a.a.a.a.a.b.k.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Amazon molly MODERN SPECIES 493 cand2 (ENSPFOG00000016530) ENSPFOG00000022805 ENSPFOG00000016607 cox6c (ENSPFOG00000016666) ENSPFOG00000016669 ENSPFOG00000016705 KCNS1 (ENSPFOG00000016725) ENSPFOG00000016764 or90a1 (ENSPFOG00000016771) ENSPFOG00000016775 ENSPFOG00000022135 ENSPFOG00000016779 matn4 (ENSPFOG00000016807) ENSPFOG00000016786 ENSPFOG00000023578 RBPJL (ENSPFOG00000016929) ##22 ENSPFOG00000016984 Sailfin molly MODERN SPECIES 2540 ENSPLAG00000012790 ENSPLAG00000012770 matn4 (ENSPLAG00000012755) RBPJL (ENSPLAG00000012716) ##22 Platyfish MODERN SPECIES 12 cand2 (ENSXMAG00000019353) ENSXMAG00000024552 ENSXMAG00000019351 cox6c (ENSXMAG00000019350) ENSXMAG00000019348 KCNS1 (ENSXMAG00000019347) ENSXMAG00000019345 ENSXMAG00000020916 ENSXMAG00000023077 ENSXMAG00000028737 ENSXMAG00000024521 ENSXMAG00000027116 ENSXMAG00000021246 ENSXMAG00000024677 matn4 (ENSXMAG00000003580) RBPJL (ENSXMAG00000003601) ##22 DOCK3 (ENSXMAG00000009900) DCAF1 (ENSXMAG00000005972) ENSXMAG00000028614 ENSXMAG00000023439 cept1b (ENSXMAG00000005988) dram2b (ENSXMAG00000006008) zgc:162255 (ENSXMAG00000025773) nfs1 (ENSXMAG00000006016) cpne1 (ENSXMAG00000006028) ENSXMAG00000023224 ENSXMAG00000006098 st3gal8 (ENSXMAG00000006130) ENSXMAG00000024535 REM1 (ENSXMAG00000006150) pnp4a (ENSXMAG00000006157) NAME_4 ANCESTRAL SPECIES 193 ENSGT00950000182846.a.a.b.a.a.e ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b.i ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Mummichog MODERN SPECIES 690 ENSFHEG00000022631 ENSFHEG00000022687 ENSFHEG00000022754 ENSFHEG00000022765 ENSFHEG00000022781 matn4 (ENSFHEG00000022814) RBPJL (ENSFHEG00000023007) ##22 Sheepshead minnow MODERN SPECIES 1283 ENSCVAG00000006393 ENSCVAG00000006363 matn4 (ENSCVAG00000006354) RBPJL (ENSCVAG00000006323) ##22 ENSCVAG00000006297 ENSCVAG00000006287 Oryzias ANCESTRAL SPECIES 1 ENSGT00950000182846.a.a.b.a.a.g ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.d ENSGT00940000161337.a.a.b.a.a.a.a.b.c ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000158547.d ENSGT00940000166842 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000165482 ENSGT00940000163873.c.b ENSGT00940000160613 Oryzias_b ANCESTRAL SPECIES 41 ENSGT00950000182846.a.a.b.a.a.h.a.b ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.d ENSGT00940000161337.a.a.b.a.a.a.a.b.c ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000160611 ENSGT00940000162210 ENSGT00940000160586 ENSGT00940000177167 ENSGT00940000158547.d ENSGT00940000166842 ENSGT00940000165482 ENSGT00940000163873.c.b Javanese ricefish MODERN SPECIES 19 sec13 (ENSOJAG00000003289) cand2 (ENSOJAG00000003032) ENSOJAG00000002925 cox6c (ENSOJAG00000002912) ENSOJAG00000002507 KCNS1 (ENSOJAG00000002351) ENSOJAG00000002335 or90a1 (ENSOJAG00000002324) ENSOJAG00000002317 ENSOJAG00000002308 ENSOJAG00000002301 ENSOJAG00000002286 ENSOJAG00000002274 ENSOJAG00000002262 matn4 (ENSOJAG00000002204) RBPJL (ENSOJAG00000002098) ##22 ENSOJAG00000002048 DOCK3 (ENSOJAG00000001298) ENSOJAG00000001196 DCAF1 (ENSOJAG00000001098) pth4 (ENSOJAG00000001081) cept1b (ENSOJAG00000000977) dram2b (ENSOJAG00000000915) zgc:162255 (ENSOJAG00000000905) nfs1 (ENSOJAG00000000884) ENSOJAG00000000685 ENSOJAG00000000405 ENSOJAG00000000231 REM1 (ENSOJAG00000000214) pnp4a (ENSOJAG00000000207) trib3 (ENSOJAG00000000193) Indian medaka MODERN SPECIES 389 ENSOMEG00000008721 MATN4 (ENSOMEG00000008692) RBPJL (ENSOMEG00000008652) ##22 DOCK3 (ENSOMEG00000008591) DCAF1 (ENSOMEG00000008489) ENSOMEG00000000900 cept1b (ENSOMEG00000008385) dram2b (ENSOMEG00000008340) zgc:162255 (ENSOMEG00000008320) nfs1 (ENSOMEG00000008290) rbm12 (ENSOMEG00000008238) ENSOMEG00000008230 cpne1 (ENSOMEG00000008209) ENSOMEG00000008169 ENSOMEG00000008101 ENSOMEG00000008078 st3gal8 (ENSOMEG00000008055) ENSOMEG00000008026 Oryzias_a ANCESTRAL SPECIES 5 ENSGT00950000182846.a.a.b.a.a.g ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b.d ENSGT00940000161337.a.a.b.a.a.a.a.b.c ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000004933.l ENSGT00950000183117.a.b.b ENSGT01030000234578.B.b.b ENSGT00390000014270 ENSGT00940000155740 ENSGT00940000162210 Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000028841 ENSORLG00000024289 ANGPT4 (ENSORLG00000028836) cox6c (ENSORLG00000020333) ENSORLG00000020097 KCNS1 (ENSORLG00000020056) ENSORLG00000023484 ENSORLG00000025836 or90a1 (ENSORLG00000020023) ENSORLG00000020015 ENSORLG00000024505 ENSORLG00000020012 ENSORLG00000020008 ENSORLG00000020004 matn4 (ENSORLG00000026326) RBPJL (ENSORLG00000029138) ##22 ENSORLG00000030345 ENSORLG00000025113 Chinese medaka MODERN SPECIES 3371 RBPJL (ENSOSIG00000001721) ##22 Ovalentaria_B ANCESTRAL SPECIES 30 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 Cichlidae ANCESTRAL SPECIES 39 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT01090000262945 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT00940000160663 Midas cichlid MODERN SPECIES 586 matn4 (ENSACIG00000024306) RBPJL (ENSACIG00000024303) ##22 Pseudocrenilabrinae ANCESTRAL SPECIES 4 ENSGT00720000109813.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b.i ENSGT00940000161337.a.a.b.a.a.b.g ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000176933 ENSGT00940000160455 ENSGT01100000263718 ENSGT00940000160663 Nile tilapia MODERN SPECIES 17 ENSONIG00000005329 KCNS1 (ENSONIG00000005340) ENSONIG00000005345 ENSONIG00000038689 ENSONIG00000005349 ENSONIG00000032388 ENSONIG00000039514 ENSONIG00000033300 ENSONIG00000040050 ENSONIG00000027749 ENSONIG00000029774 ENSONIG00000035823 ENSONIG00000031843 arpc3 (ENSONIG00000021383) matn4 (ENSONIG00000005355) RBPJL (ENSONIG00000005364) ##22 ENSONIG00000035683 ENSONIG00000032940 ENSONIG00000036748 ENSONIG00000041583 ENSONIG00000042564 ENSONIG00000038717 ENSONIG00000031411 ENSONIG00000030061 ENSONIG00000029655 ENSONIG00000005376 ENSONIG00000039866 ENSONIG00000034818 DOCK3 (ENSONIG00000004468) DCAF1 (ENSONIG00000004465) smpd4 (ENSONIG00000004460) Pseudocrenilabrinae_A ANCESTRAL SPECIES 2 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b.i ENSGT00940000161337.a.a.b.a.a.b.h ENSGT00940000161337.a.a.b.a.a.b.g ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000170002.G ENSGT00940000170002.F Haplochromini ANCESTRAL SPECIES 1 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b.i ENSGT00940000161337.a.a.b.a.a.b.h ENSGT00940000161337.a.a.b.a.a.b.g ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b.m.a ENSGT00390000005197.b ##22 ENSGT00940000170002.G ENSGT00940000170002.F ENSGT00940000170002.B.a Burton s mouthbrooder MODERN SPECIES 887 ENSHBUG00000022884 ENSHBUG00000022840 ENSHBUG00000022760 ENSHBUG00000022746 matn4 (ENSHBUG00000022730) RBPJL (ENSHBUG00000022654) ##22 ENSHBUG00000022002 ENSHBUG00000021992 ENSHBUG00000021988 ENSHBUG00000021983 ENSHBUG00000021976 ENSHBUG00000021968 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b.i ENSGT00940000161337.a.a.b.a.a.b.h ENSGT00940000161337.a.a.b.a.a.b.g ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b.m.a ENSGT00390000005197.b ##22 ENSGT00940000170002.G ENSGT00940000170002.F ENSGT00940000170002.B.a ENSGT00940000173056.a.a.b.a.a.a.a P. nyererei MODERN SPECIES 679 ENSPNYG00000013749 ENSPNYG00000013715 ENSPNYG00000013678 ENSPNYG00000013655 ENSPNYG00000013620 matn4 (ENSPNYG00000013528) RBPJL (ENSPNYG00000013213) ##22 ENSPNYG00000013135 ENSPNYG00000013129 ENSPNYG00000013119 ENSPNYG00000013088 Haplochromini_B DUPLICATION Haplochromini_B ANCESTRAL SPECIES 84 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b.i.a ENSGT00940000161337.a.a.b.a.b.i.b ENSGT00940000161337.a.a.b.a.a.b.g.a ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b.m.a ENSGT00390000005197.b.e ##22 ENSGT00940000170002.G ENSGT00940000170002.F Zebra mbuna MODERN SPECIES 1108 ENSMZEG00005007824 cox6c (ENSMZEG00005007836) ENSMZEG00005007850 KCNS1 (ENSMZEG00005007877) ENSMZEG00005007900 or90a1 (ENSMZEG00005007909) ENSMZEG00005007920 ENSMZEG00005007940 ENSMZEG00005007954 ENSMZEG00005007971 ENSMZEG00005007991 ENSMZEG00005008007 ENSMZEG00005008037 ENSMZEG00005008042 matn4 (ENSMZEG00005008052) RBPJL (ENSMZEG00005008101) ##22 dag1 (ENSMZEG00005008374) ENSMZEG00005008385 ENSMZEG00005008406 nicn1 (ENSMZEG00005008420) ENSMZEG00005008459 GRM7 (ENSMZEG00005008472) ENSMZEG00005008501 RNF123 (ENSMZEG00005008522) AMIGO3 (ENSMZEG00005008553) aldh4a1 (ENSMZEG00005008572) ASCL5 (ENSMZEG00005008611) ENSMZEG00005008626 KCNQ2 (ENSMZEG00005008656) ddx27 (ENSMZEG00005008750) pltp (ENSMZEG00005008780) Eastern happy MODERN SPECIES 17 ENSACLG00000016434 KCNS1 (ENSACLG00000016382) ENSACLG00000016258 ENSACLG00000016135 or90a1 (ENSACLG00000016119) ENSACLG00000016054 ENSACLG00000016004 ENSACLG00000015994 ENSACLG00000015955 ENSACLG00000015822 ENSACLG00000015803 ENSACLG00000015745 ENSACLG00000015734 ENSACLG00000015717 matn4 (ENSACLG00000015606) RBPJL (ENSACLG00000015202) ##22 ENSACLG00000015153 ENSACLG00000015134 ENSACLG00000015126 khk (ENSACLG00000015065) pltp (ENSACLG00000015025) ddx27 (ENSACLG00000014992) ENSACLG00000014985 KCNQ2 (ENSACLG00000014862) ctsa (ENSACLG00000014752) ENSACLG00000014742 ENSACLG00000014740 ENSACLG00000014728 snrpb (ENSACLG00000014707) ENSACLG00000014682 zgc:109913 (ENSACLG00000014668) Haplochromini_B ANCESTRAL SPECIES 237 ENSGT00940000157086.b.m.b ENSGT00390000005197.b.f ##22 Zebra mbuna MODERN SPECIES 46 KCNS1 (ENSMZEG00005021372) ENSMZEG00005021365 ENSMZEG00005021363 ENSMZEG00005021360 ENSMZEG00005021356 ENSMZEG00005021341 ENSMZEG00005021335 ENSMZEG00005021334 ENSMZEG00005021331 matn4 (ENSMZEG00005021321) RBPJL (ENSMZEG00005021291) ##22 ENSMZEG00005021275 ENSMZEG00005021270 ENSMZEG00005021266 ENSMZEG00005021264 ENSMZEG00005021261 ENSMZEG00005021260 ENSMZEG00005021255 ENSMZEG00005021251 ENSMZEG00005021249 ENSMZEG00005021247 Pomacentridae ANCESTRAL SPECIES 119 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Bicolor damselfish MODERN SPECIES 246 ENSSPAG00000020213 ENSSPAG00000020153 ENSSPAG00000020138 matn4 (ENSSPAG00000020104) RBPJL (ENSSPAG00000020034) ##22 gnat1 (ENSSPAG00000020013) sema3fa (ENSSPAG00000019904) ENSSPAG00000019876 CAMKV (ENSSPAG00000019845) ENSSPAG00000019825 ENSSPAG00000019782 inka1b (ENSSPAG00000019815) gnai2b (ENSSPAG00000019751) SLC38A3 (ENSSPAG00000019668) rbm5 (ENSSPAG00000019638) BRK1 (ENSSPAG00000019632) ENSSPAG00000019585 TEX264 (ENSSPAG00000019573) grm2b (ENSSPAG00000019561) rrp9 (ENSSPAG00000019524) Pomacentridae_A ANCESTRAL SPECIES 89 ENSGT00950000182846.a.a.b.a.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Spiny chromis MODERN SPECIES 911 RBPJL (ENSAPOG00000011659) ##22 slc9a5 (ENSAPOG00000011841) FHOD1 (ENSAPOG00000011895) Amphiprion ANCESTRAL SPECIES 108 ENSGT00950000183202.a.a ENSGT00940000161090.B.c.b.b.a ENSGT00950000182846.a.a.b.a.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000158197.c ENSGT00940000166655 ENSGT00950000183042.a.a ENSGT00950000182939.b.a.a ENSGT00940000158759 Orange clownfish MODERN SPECIES 20 rbl1 (ENSAPEG00000000926) ENSAPEG00000001025 dnase1l4.2 (ENSAPEG00000001115) sec13 (ENSAPEG00000001244) cand2 (ENSAPEG00000001285) ENSAPEG00000001307 ENSAPEG00000001317 cox6c (ENSAPEG00000001326) ENSAPEG00000001340 KCNS1 (ENSAPEG00000001416) ENSAPEG00000001458 or90a1 (ENSAPEG00000001573) ENSAPEG00000001645 ENSAPEG00000001734 matn4 (ENSAPEG00000001833) RBPJL (ENSAPEG00000001913) ##22 ENSAPEG00000002148 stk35l (ENSAPEG00000002179) ENSAPEG00000002204 slc41a1 (ENSAPEG00000002235) etnk2 (ENSAPEG00000002286) sox13 (ENSAPEG00000002319) PLEKHA6 (ENSAPEG00000002380) ENSAPEG00000002482 ENSAPEG00000002502 ENSAPEG00000002520 optc (ENSAPEG00000002534) ENSAPEG00000002563 appl1 (ENSAPEG00000002746) ENSAPEG00000002838 ENSAPEG00000002879 Clown anemonefish MODERN SPECIES 836 rbl1 (ENSAOCG00000005620) ENSAOCG00000005549 ENSAOCG00000005520 sec13 (ENSAOCG00000005509) cand2 (ENSAOCG00000005469) ENSAOCG00000005415 ENSAOCG00000005404 cox6c (ENSAOCG00000000256) ENSAOCG00000005378 KCNS1 (ENSAOCG00000005352) ENSAOCG00000005332 or90a1 (ENSAOCG00000005268) ENSAOCG00000005223 ENSAOCG00000000218 matn4 (ENSAOCG00000000213) RBPJL (ENSAOCG00000005057) ##22 stk35l (ENSAOCG00000005006) ENSAOCG00000005001 slc41a1 (ENSAOCG00000004987) etnk2 (ENSAOCG00000004966) sox13 (ENSAOCG00000004945) Percomorphaceae_C ANCESTRAL SPECIES 1 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Percomorphaceae_D ANCESTRAL SPECIES 3 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT01100000263864 ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Anabantaria ANCESTRAL SPECIES ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT01100000263864 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00390000011067.A ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 Zig-zag eel MODERN SPECIES 19 ENSMAMG00000012026 ENSMAMG00000011992 ENSMAMG00000011980 ENSMAMG00000011938 ENSMAMG00000011930 ENSMAMG00000011869 KCNS1 (ENSMAMG00000011834) ENSMAMG00000011821 ENSMAMG00000024777 or90a1 (ENSMAMG00000011445) ENSMAMG00000011425 ENSMAMG00000011392 ENSMAMG00000011356 ENSMAMG00000011351 matn4 (ENSMAMG00000011272) RBPJL (ENSMAMG00000011008) ##22 ENSMAMG00000010978 ENSMAMG00000010907 ENSMAMG00000026935 ENSMAMG00000028684 ENSMAMG00000010880 ENSMAMG00000010949 ENSMAMG00000025648 ENSMAMG00000026443 ENSMAMG00000000902 ENSMAMG00000010746 ENSMAMG00000010673 ENSMAMG00000010620 ENSMAMG00000010605 ENSMAMG00000010585 ENSMAMG00000010567 Anabantoidei ANCESTRAL SPECIES 1 ENSGT00950000182846.a.a.b.a.a ENSGT00950000182846.a.a.b.a.b ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT01100000263864 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 Climbing perch MODERN SPECIES 18 ENSATEG00000006317 ENSATEG00000006331 ENSATEG00000006393 ENSATEG00000006470 ENSATEG00000006585 KCNS1 (ENSATEG00000006633) ENSATEG00000006682 ENSATEG00000006742 ENSATEG00000006793 ENSATEG00000007112 ENSATEG00000006888 ENSATEG00000007236 ENSATEG00000007328 ENSATEG00000007343 matn4 (ENSATEG00000007354) RBPJL (ENSATEG00000007414) ##22 ENSATEG00000007618 ENSATEG00000007650 ENSATEG00000007684 ENSATEG00000007691 ENSATEG00000007773 ENSATEG00000029701 ENSATEG00000007787 ENSATEG00000008011 ENSATEG00000008056 ENSATEG00000008153 ENSATEG00000008161 ENSATEG00000008170 ENSATEG00000008188 eif6 (ENSATEG00000008205) ENSATEG00000008260 Siamese fighting fish DUPLICATION Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 16 SSUH2 (ENSBSLG00000000890) ENSBSLG00000000882 smpd4 (ENSBSLG00000000872) DCAF1 (ENSBSLG00000000641) cox6c (ENSBSLG00000017952) ENSBSLG00000017777 KCNS1 (ENSBSLG00000017714) ENSBSLG00000017700 ENSBSLG00000017671 ENSBSLG00000017664 ENSBSLG00000017654 ENSBSLG00000017646 ENSBSLG00000017636 matn4 (ENSBSLG00000017566) RBPJL (ENSBSLG00000017534) ##22 ENSBSLG00000017520 ##22 ENSBSLG00000017505 ##22 ENSBSLG00000017479 RBPJL (ENSBSLG00000017420) ##22 matn4 (ENSBSLG00000017384) ENSBSLG00000017373 ENSBSLG00000017364 ENSBSLG00000017349 ENSBSLG00000017333 ENSBSLG00000017323 ENSBSLG00000017316 KCNS1 (ENSBSLG00000017297) ENSBSLG00000017020 cox6c (ENSBSLG00000017002) zgc:171566 (ENSBSLG00000016657) PTPRT (ENSBSLG00000014784) Siamese fighting fish MODERN SPECIES 16 ENSBSLG00000000882 smpd4 (ENSBSLG00000000872) DCAF1 (ENSBSLG00000000641) cox6c (ENSBSLG00000017952) ENSBSLG00000017777 KCNS1 (ENSBSLG00000017714) ENSBSLG00000017700 ENSBSLG00000017671 ENSBSLG00000017664 ENSBSLG00000017654 ENSBSLG00000017646 ENSBSLG00000017636 matn4 (ENSBSLG00000017566) RBPJL (ENSBSLG00000017534) ##22 ENSBSLG00000017520 ##22 ENSBSLG00000017505 ##22 ENSBSLG00000017479 RBPJL (ENSBSLG00000017420) ##22 matn4 (ENSBSLG00000017384) ENSBSLG00000017373 ENSBSLG00000017364 ENSBSLG00000017349 ENSBSLG00000017333 ENSBSLG00000017323 ENSBSLG00000017316 KCNS1 (ENSBSLG00000017297) ENSBSLG00000017020 cox6c (ENSBSLG00000017002) zgc:171566 (ENSBSLG00000016657) PTPRT (ENSBSLG00000014784) rspo4 (ENSBSLG00000014756) Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 16 CHD6 (ENSBSLG00000014218) rspo4 (ENSBSLG00000014721) rspo4 (ENSBSLG00000014756) PTPRT (ENSBSLG00000014784) zgc:171566 (ENSBSLG00000016657) cox6c (ENSBSLG00000017002) ENSBSLG00000017020 KCNS1 (ENSBSLG00000017297) ENSBSLG00000017316 ENSBSLG00000017323 ENSBSLG00000017333 ENSBSLG00000017349 ENSBSLG00000017364 ENSBSLG00000017373 matn4 (ENSBSLG00000017384) RBPJL (ENSBSLG00000017420) ##22 ENSBSLG00000017479 ENSBSLG00000017505 ##22 ENSBSLG00000017520 ##22 RBPJL (ENSBSLG00000017534) ##22 matn4 (ENSBSLG00000017566) ENSBSLG00000017636 ENSBSLG00000017646 ENSBSLG00000017654 ENSBSLG00000017664 ENSBSLG00000017671 ENSBSLG00000017700 KCNS1 (ENSBSLG00000017714) ENSBSLG00000017777 cox6c (ENSBSLG00000017952) DCAF1 (ENSBSLG00000000641) Siamese fighting fish MODERN SPECIES 16 ENSBSLG00000000892 SSUH2 (ENSBSLG00000000890) ENSBSLG00000000882 smpd4 (ENSBSLG00000000872) DCAF1 (ENSBSLG00000000641) cox6c (ENSBSLG00000017952) ENSBSLG00000017777 KCNS1 (ENSBSLG00000017714) ENSBSLG00000017700 ENSBSLG00000017671 ENSBSLG00000017664 ENSBSLG00000017654 ENSBSLG00000017646 ENSBSLG00000017636 matn4 (ENSBSLG00000017566) RBPJL (ENSBSLG00000017534) ##22 ENSBSLG00000017520 ##22 ENSBSLG00000017505 ##22 ENSBSLG00000017479 RBPJL (ENSBSLG00000017420) ##22 matn4 (ENSBSLG00000017384) ENSBSLG00000017373 ENSBSLG00000017364 ENSBSLG00000017349 ENSBSLG00000017333 ENSBSLG00000017323 ENSBSLG00000017316 KCNS1 (ENSBSLG00000017297) ENSBSLG00000017020 cox6c (ENSBSLG00000017002) zgc:171566 (ENSBSLG00000016657) Carangaria ANCESTRAL SPECIES 3 ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT01100000263864 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 Pleuronectoidei ANCESTRAL SPECIES 31 ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a ENSGT00940000160561 Turbot MODERN SPECIES 18 cpne1 (ENSSMAG00000004321) ENSSMAG00000004447 ENSSMAG00000004562 st3gal8 (ENSSMAG00000004600) ENSSMAG00000004625 ENSSMAG00000004653 ENSSMAG00000004661 ENSSMAG00000034894 or90a1 (ENSSMAG00000004741) ENSSMAG00000004791 ENSSMAG00000035903 ENSSMAG00000009850 ENSSMAG00000009750 ENSSMAG00000035896 matn4 (ENSSMAG00000009631) ENSSMAG00000009560 ##22 ENSSMAG00000035480 ENSSMAG00000022188 ENSSMAG00000004873 ENSSMAG00000023083 ENSSMAG00000022119 ENSSMAG00000005128 ENSSMAG00000005206 ENSSMAG00000005293 ENSSMAG00000005626 ENSSMAG00000005648 ENSSMAG00000025417 EIF6 (ENSSMAG00000005666) ENSSMAG00000005694 fam83c (ENSSMAG00000005791) uqcc1 (ENSSMAG00000005727) Tongue sole MODERN SPECIES 2 ENSCSEG00000020086 KCNS1 (ENSCSEG00000020051) ENSCSEG00000020047 ENSCSEG00000020042 ENSCSEG00000020019 or90a1 (ENSCSEG00000020015) ENSCSEG00000020011 ENSCSEG00000020007 ENSCSEG00000020005 ENSCSEG00000019992 ENSCSEG00000019984 ENSCSEG00000019981 ENSCSEG00000019965 ENSCSEG00000019961 matn4 (ENSCSEG00000019948) RBPJL (ENSCSEG00000019940) ##22 ENSCSEG00000019937 mych (ENSCSEG00000019936) romo1 (ENSCSEG00000019934) ergic3 (ENSCSEG00000019923) dynlrb2 (ENSCSEG00000019920) map1lc3a (ENSCSEG00000019914) eif6 (ENSCSEG00000019905) MMP24 (ENSCSEG00000019898) ENSCSEG00000019861 ENSCSEG00000019854 cyp24a1 (ENSCSEG00000019846) ENSCSEG00000019842 manbal (ENSCSEG00000019841) SRC (ENSCSEG00000019825) APCDD1L (ENSCSEG00000019818) Carangaria_A ANCESTRAL SPECIES 58 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT01100000263864 Seriola ANCESTRAL SPECIES 79 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000159787 ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a.s ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Greater amberjack MODERN SPECIES 58 ENSSDUG00000009917 KCNS1 (ENSSDUG00000009952) ENSSDUG00000009980 or90a1 (ENSSDUG00000009996) ENSSDUG00000010016 ENSSDUG00000010031 ENSSDUG00000010048 ENSSDUG00000010095 ENSSDUG00000010131 ENSSDUG00000010177 ENSSDUG00000010188 ENSSDUG00000010197 ENSSDUG00000010205 ENSSDUG00000010211 matn4 (ENSSDUG00000010255) RBPJL (ENSSDUG00000010394) ##22 Yellowtail amberjack MODERN SPECIES 2018 RBPJL (ENSSLDG00000009297) ##22 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 1221 RBPJL (ENSLCAG00010009818) ##22 Barramundi perch MODERN SPECIES 503 ENSLCAG00010001332 ENSLCAG00010001327 ENSLCAG00010001324 ENSLCAG00010001323 or90a1 (ENSLCAG00010001318) ENSLCAG00010001314 ENSLCAG00010001306 ENSLCAG00010001299 ENSLCAG00010001289 ENSLCAG00010001275 ENSLCAG00010001268 ENSLCAG00010001262 ENSLCAG00010001251 ENSLCAG00010001247 matn4 (ENSLCAG00010001245) RBPJL (ENSLCAG00010001242) ##22 ENSLCAG00010001240 Eupercaria ANCESTRAL SPECIES ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Tetraodontidae ANCESTRAL SPECIES 1 ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000161337.a.a.a.b ENSGT00940000160096 ENSGT00940000159787 ENSGT00940000154984.B ENSGT00940000165514 ENSGT00940000160129 ENSGT00940000153393.B ENSGT00390000018016 ENSGT01050000244866.D.a.c ENSGT00940000154697.a.b ENSGT01090000260040.b.a.b.y.b ENSGT00940000158934 ENSGT00940000166055 ENSGT00390000013951 ENSGT00390000007458 Fugu MODERN SPECIES 10 ENSTRUG00000004124 ENSTRUG00000031743 rbm39a (ENSTRUG00000021378) ENSTRUG00000031224 MKRN2OS (ENSTRUG00000029635) mkrn2 (ENSTRUG00000003156) ENSTRUG00000020229 ENSTRUG00000026378 ENSTRUG00000003638 ENSTRUG00000026113 ENSTRUG00000028895 ENSTRUG00000028985 ENSTRUG00000030913 ENSTRUG00000033445 matn4 (ENSTRUG00000000492) RBPJL (ENSTRUG00000030033) ##22 ENSTRUG00000033248 KCNS1 (ENSTRUG00000032761) ENSTRUG00000000941 cox6c (ENSTRUG00000001090) ENSTRUG00000021176 sec13 (ENSTRUG00000001500) ENSTRUG00000025339 ENSTRUG00000024970 ENSTRUG00000025859 ENSTRUG00000028840 ENSTRUG00000032867 ENSTRUG00000020050 ENSTRUG00000029159 ENSTRUG00000026917 ENSTRUG00000026902 Tetraodon MODERN SPECIES 2 RIMS4 (ENSTNIG00000004121) YWHAB (ENSTNIG00000004119) tomm34 (ENSTNIG00000004118) ENSTNIG00000004117 ccndbp1 (ENSTNIG00000002763) sec13 (ENSTNIG00000002764) ANGPT4 (ENSTNIG00000005217) cox6c (ENSTNIG00000000694) STK4 (ENSTNIG00000005218) KCNS1 (ENSTNIG00000005219) or90a1 (ENSTNIG00000000150) ENSTNIG00000000079 ENSTNIG00000000527 ENSTNIG00000000291 matn4 (ENSTNIG00000005220) RBPJL (ENSTNIG00000005221) ##22 ENSTNIG00000005222 rbm39a (ENSTNIG00000005223) isy1 (ENSTNIG00000005224) ENSTNIG00000005225 pcif1 (ENSTNIG00000005226) Eupecaria_A ANCESTRAL SPECIES ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1618 RBPJL (ENSLBEG00000007806) ##22 Ballan wrasse MODERN SPECIES 3905 RBPJL (ENSLBEG00000020912) ##22 Eupecaria_B ANCESTRAL SPECIES 2 ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000005874.j ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Eupecaria_C ANCESTRAL SPECIES ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.a.b ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 Eupercaria_incertae_sedis ANCESTRAL SPECIES ENSGT00940000161090.B.c.b.b.a ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.b ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 European seabass MODERN SPECIES 10 ENSDLAG00005015592 ENSDLAG00005004406 ENSDLAG00005029257 ENSDLAG00005033619 ENSDLAG00005031075 ENSDLAG00005003707 KCNS1 (ENSDLAG00005003792) ENSDLAG00005034701 ENSDLAG00005003807 ENSDLAG00005003829 ENSDLAG00005007035 ENSDLAG00005028690 ENSDLAG00005032657 ENSDLAG00005015304 matn4 (ENSDLAG00005003839) RBPJL (ENSDLAG00005003897) ##22 ENSDLAG00005027809 ENSDLAG00005030385 ENSDLAG00005030770 ENSDLAG00005018211 ENSDLAG00005031407 ENSDLAG00005033379 ENSDLAG00005029624 Large yellow croaker MODERN SPECIES 478 ENSLCRG00005007203 c1qa (ENSLCRG00005007202) ENSLCRG00005007201 c1qb (ENSLCRG00005007200) ENSLCRG00005007197 cox6c (ENSLCRG00005007196) ENSLCRG00005007178 KCNS1 (ENSLCRG00005007175) ENSLCRG00005007173 ENSLCRG00005007169 ENSLCRG00005007151 ENSLCRG00005007150 ENSLCRG00005007148 ENSLCRG00005007146 matn4 (ENSLCRG00005007119) RBPJL (ENSLCRG00005007116) ##22 ENSLCRG00005007114 ENSLCRG00005007091 nampt2 (ENSLCRG00005007086) LDLRAD2 (ENSLCRG00005007084) G0S2 (ENSLCRG00005007083) ENSLCRG00005007080 camk1ga (ENSLCRG00005007012) USP48 (ENSLCRG00005006859) cyb561d1 (ENSLCRG00005006841) atxn7l2a (ENSLCRG00005006837) sypl2a (ENSLCRG00005006835) zc3h11a (ENSLCRG00005006827) ENSLCRG00005006821 ENSLCRG00005006819 fezf2 (ENSLCRG00005006818) Gilthead seabream MODERN SPECIES 20 ENSSAUG00010006154 or90a1 (ENSSAUG00010006160) ENSSAUG00010006164 ENSSAUG00010006172 ENSSAUG00010006176 ENSSAUG00010006179 ENSSAUG00010006181 ENSSAUG00010006185 ENSSAUG00010006187 ENSSAUG00010006190 ENSSAUG00010006193 ENSSAUG00010006196 ENSSAUG00010006203 ENSSAUG00010006212 matn4 (ENSSAUG00010006231) RBPJL (ENSSAUG00010006248) ##22 ENSSAUG00010006262 ENSSAUG00010006268 ENSSAUG00010006271 ENSSAUG00010006274 ENSSAUG00010006276 C1QB (ENSSAUG00010006277) ENSSAUG00010006279 C1QA (ENSSAUG00010006284) ENSSAUG00010006289 ENSSAUG00010006292 ENSSAUG00010006295 dnase1l4.1 (ENSSAUG00010006299) tma7 (ENSSAUG00010006300) ccdc51 (ENSSAUG00010006301) osgn1 (ENSSAUG00010006302) Perciformes ANCESTRAL SPECIES ENSGT00950000182846.a.a.b.a.a ENSGT00950000182846.a.a.b.a.b ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00940000155514.c ENSGT00390000006044 ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 ENSGT00390000007160.a.a Cottioidei ANCESTRAL SPECIES ENSGT00390000015972 ENSGT00940000158853 ENSGT00390000011067.C ENSGT00440000038003 ENSGT00940000165085 ENSGT00390000006044 ENSGT00390000005874.j ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00530000063880.a ENSGT00950000183202.a.a ENSGT00390000012257 ENSGT00390000014941 ENSGT01050000244824.F ENSGT00730000111323 ENSGT00390000014105 ENSGT00940000153717.a.b ENSGT00940000158986 ENSGT00940000160937 ENSGT00940000155326.b ENSGT00940000163190.h.a.b ENSGT00940000163864 ENSGT00940000154404.b ENSGT00940000158263 Stickleback MODERN SPECIES 587 ENSGACG00000000008 eif6 (ENSGACG00000000009) map1lc3a (ENSGACG00000000010) dynlrb2 (ENSGACG00000000011) ENSGACG00000000012 smpd4 (ENSGACG00000000013) DOCK3 (ENSGACG00000000014) cand2 (ENSGACG00000000015) cox6c (ENSGACG00000000016) ENSGACG00000000017 ENSGACG00000000018 KCNS1 (ENSGACG00000000019) ENSGACG00000000020 ENSGACG00000000021 matn4 (ENSGACG00000000022) ENSGACG00000000023 ##22 rbl1 (ENSGACG00000000024) psmf1 (ENSGACG00000000025) mcm2 (ENSGACG00000000027) ENSGACG00000000030 ENSGACG00000000031 blcap (ENSGACG00000000033) ripor3 (ENSGACG00000000035) CHD6 (ENSGACG00000000037) PTPRT (ENSGACG00000000039) Lumpfish MODERN SPECIES 20 ENSCLMG00005019610 ENSCLMG00005019609 ENSCLMG00005019608 sec13 (ENSCLMG00005019607) cand2 (ENSCLMG00005019601) ANGPT4 (ENSCLMG00005019570) cox6c (ENSCLMG00005019568) ENSCLMG00005019504 KCNS1 (ENSCLMG00005019503) ENSCLMG00005019502 ENSCLMG00005019500 ENSCLMG00005019499 ENSCLMG00005019498 matn4 (ENSCLMG00005019482) ENSCLMG00005019479 RBPJL (ENSCLMG00005019477) ##22 ENSCLMG00005019476 ENSCLMG00005019475 rbl1 (ENSCLMG00005018994) psmf1 (ENSCLMG00005018988) pigu (ENSCLMG00005018982) mcm2 (ENSCLMG00005018892) blcap (ENSCLMG00005018891) ENSCLMG00005018889 ENSCLMG00005018887 CHD6 (ENSCLMG00005009283) rspo4 (ENSCLMG00005009209) ENSCLMG00005009208 PTPRT (ENSCLMG00005008937) aldh4a1 (ENSCLMG00005007771) ENSCLMG00005007760 Perciformes_a ANCESTRAL SPECIES 41 ENSGT00950000182846.a.a.b.a.a ENSGT00950000182846.a.a.b.a.b ENSGT00940000153393.B ENSGT00390000017740.a.b ENSGT00720000109813 ENSGT00940000160129 ENSGT00940000165514 ENSGT00940000154984.B ENSGT00940000160096 ENSGT00940000161337.a.a.a.b ENSGT00940000161337.a.a.a.a ENSGT00940000161337.a.a.b.a.b ENSGT00940000161337.a.a.b.a.a.a.a.a.a ENSGT00940000161337.a.a.b.a.a.a.a.a.b ENSGT00940000157086.b ENSGT00390000005197.b ##22 ENSGT00390000005874.j ENSGT00390000006044 ENSGT00970000193381.b ENSGT00940000165085 ENSGT00440000038003 ENSGT00390000011067.C ENSGT00940000158853 ENSGT00390000015972 ENSGT00940000158315 ENSGT00940000160254 ENSGT00390000018118 ENSGT00940000160455 ENSGT00940000176933 ENSGT00940000160663 ENSGT00390000018547 Channel bull blenny MODERN SPECIES 19 ENSCGOG00000000870 rbl1 (ENSCGOG00000000899) ENSCGOG00000001122 ENSCGOG00000001205 cand2 (ENSCGOG00000001206) ENSCGOG00000001208 ANGPT4 (ENSCGOG00000001212) cox6c (ENSCGOG00000001223) ENSCGOG00000001242 KCNS1 (ENSCGOG00000001458) or90a1 (ENSCGOG00000001464) ENSCGOG00000001468 ENSCGOG00000001473 ENSCGOG00000001477 matn4 (ENSCGOG00000001482) RBPJL (ENSCGOG00000001485) ##22 DCAF1 (ENSCGOG00000001505) smpd4 (ENSCGOG00000001730) ENSCGOG00000002071 GDF5 (ENSCGOG00000002074) ENSCGOG00000002088 ENSCGOG00000002091 ENSCGOG00000002095 sdc4 (ENSCGOG00000002101) manf (ENSCGOG00000002103) oser1 (ENSCGOG00000002104) ENSCGOG00000002105 dag1 (ENSCGOG00000002107) ENSCGOG00000002112 nicn1 (ENSCGOG00000002116) ENSCGOG00000002121 Pike perch MODERN SPECIES 157 ENSSLUG00000017099 ENSSLUG00000017103 ENSSLUG00000017162 KCNS1 (ENSSLUG00000018026) or90a1 (ENSSLUG00000018030) ENSSLUG00000018038 ENSSLUG00000018045 ENSSLUG00000018051 ENSSLUG00000018052 matn4 (ENSSLUG00000018063) ENSSLUG00000018219 ENSSLUG00000015343 ENSSLUG00000015353 ENSSLUG00000015363 ENSSLUG00000015370 RBPJL (ENSSLUG00000015404) ##22 ENSSLUG00000015690 ENSSLUG00000015700 Tiger tail seahorse MODERN SPECIES 295 ENSHCOG00000016059 ENSHCOG00000016048 ENSHCOG00000016038 mapkapk3 (ENSHCOG00000015990) ENSHCOG00000015664 pfkfb4a (ENSHCOG00000015656) magi1b (ENSHCOG00000015640) ADAMTS9 (ENSHCOG00000015550) ENSHCOG00000015489 ENSHCOG00000015471 ENSHCOG00000015462 ENSHCOG00000015454 ENSHCOG00000015450 or90a1 (ENSHCOG00000015406) matn4 (ENSHCOG00000015393) RBPJL (ENSHCOG00000015360) ##22 ENSHCOG00000015149 KCNQ2 (ENSHCOG00000015144) ENSHCOG00000015113 cox6c (ENSHCOG00000015095) cox6c (ENSHCOG00000015087) ENSHCOG00000015033 KCNS1 (ENSHCOG00000014995) pltp (ENSHCOG00000000834) khk (ENSHCOG00000014960) ctsa (ENSHCOG00000014934) snrpb (ENSHCOG00000014888) ENSHCOG00000014879 zgc:109913 (ENSHCOG00000014860) ube2c (ENSHCOG00000014848) DNTTIP1 (ENSHCOG00000014830) Pinecone sodierfish MODERN SPECIES 19 ANGPT4 (ENSMMDG00005006167) cox6c (ENSMMDG00005006156) ENSMMDG00005005878 KCNS1 (ENSMMDG00005005813) ENSMMDG00005005801 ENSMMDG00005005793 or90a1 (ENSMMDG00005005788) ENSMMDG00005005781 ENSMMDG00005005777 ENSMMDG00005005771 ENSMMDG00005005766 ENSMMDG00005005760 ENSMMDG00005005754 ENSMMDG00005005751 matn4 (ENSMMDG00005005606) RBPJL (ENSMMDG00005005594) ##22 ENSMMDG00005005592 DOCK3 (ENSMMDG00005003464) DCAF1 (ENSMMDG00005003421) smpd4 (ENSMMDG00005003305) slc38a9 (ENSMMDG00005003272) ENSMMDG00005003268 ENSMMDG00005003265 dynlrb2 (ENSMMDG00005003261) map1lc3a (ENSMMDG00005003255) eif6 (ENSMMDG00005003249) MMP24 (ENSMMDG00005003243) fam83c (ENSMMDG00005003239) uqcc1 (ENSMMDG00005003234) GDF5 (ENSMMDG00005003163) sdc4 (ENSMMDG00005003151) Cod MODERN SPECIES 4 ENSGMOG00000009447 ENSGMOG00000032011 or90a1 (ENSGMOG00000036460) ENSGMOG00000020267 ENSGMOG00000009450 ENSGMOG00000009464 ENSGMOG00000009469 ENSGMOG00000009480 ENSGMOG00000009473 ENSGMOG00000033657 ENSGMOG00000030422 ENSGMOG00000023133 ENSGMOG00000031791 ENSGMOG00000036255 matn4 (ENSGMOG00000008014) RBPJL (ENSGMOG00000033430) ##22 ENSGMOG00000000037 ENSGMOG00000000495 ENSGMOG00000025556 ENSGMOG00000019969 ENSGMOG00000029123 ENSGMOG00000024910 ENSGMOG00000008065 osgn1 (ENSGMOG00000013760) mtss1 (ENSGMOG00000022788) romo1 (ENSGMOG00000010485) ergic3 (ENSGMOG00000010470) ENSGMOG00000010494 ENSGMOG00000011677 ENSGMOG00000024262 ENSGMOG00000035102 Spotted gar MODERN SPECIES 656 ENSLOCG00000007472 RIMS4 (ENSLOCG00000007486) ywhaba (ENSLOCG00000007504) pabpc1l (ENSLOCG00000007519) tomm34 (ENSLOCG00000007539) cox6c (ENSLOCG00000007557) STK4 (ENSLOCG00000007569) KCNS1 (ENSLOCG00000007582) or90h4 (ENSLOCG00000018368) ENSLOCG00000018369 ENSLOCG00000007596 ENSLOCG00000017821 or90a1 (ENSLOCG00000017822) ENSLOCG00000017823 matn4 (ENSLOCG00000007617) RBPJL (ENSLOCG00000007645) ##22 oser1 (ENSLOCG00000007656) sdc4 (ENSLOCG00000007671) GDF5 (ENSLOCG00000007687) uqcc1 (ENSLOCG00000007712) fam83c (ENSLOCG00000007724) anxa13l (ENSLOCG00000007737) MMP24 (ENSLOCG00000007747) eif6 (ENSLOCG00000007763) Reedfish MODERN SPECIES 1 ATP9A (ENSECRG00000010860) NFATC2 (ENSECRG00000010756) ENSECRG00000010747 cse1l (ENSECRG00000010735) snrpb (ENSECRG00000010721) dpm1 (ENSECRG00000010712) adnpa (ENSECRG00000010704) pard6b (ENSECRG00000010695) sod1 (ENSECRG00000010691) ENSECRG00000010688 ENSECRG00000010641 ENSECRG00000010619 ENSECRG00000010605 ENSECRG00000010599 matn4 (ENSECRG00000010588) RBPJL (ENSECRG00000010566) ##22 mych (ENSECRG00000010553) mtss1 (ENSECRG00000010526) osgn1 (ENSECRG00000010512) eif6 (ENSECRG00000010505) MMP24 (ENSECRG00000010491) ENSECRG00000010479 ENSECRG00000010475 anxa13l (ENSECRG00000010467) fam83c (ENSECRG00000010460) uqcc1 (ENSECRG00000010453) GDF5 (ENSECRG00000010448) ENSECRG00000010442 oser1 (ENSECRG00000010438) ergic3 (ENSECRG00000010414) romo1 (ENSECRG00000010402) Elephant shark MODERN SPECIES 1959 matn4 (ENSCMIG00000016932) RBPJL (ENSCMIG00000016924) ##22 oser1 (ENSCMIG00000016920) Cyclostomata ANCESTRAL SPECIES ENSGT00390000005197.b ##22 Hagfish MODERN SPECIES 4 ENSEBUG00000002305 ENSEBUG00000005697 ENSEBUG00000000545 ENSEBUG00000008409 rpl30 (ENSEBUG00000005983) ENSEBUG00000011253 ##22 STK3 (ENSEBUG00000002162) Ciona ANCESTRAL SPECIES 1110 ENSGT00390000005197.b ##22 ENSGT00390000001455 Ciona intestinalis MODERN SPECIES 3 ENSCING00000004261 ENSCING00000004269 ENSCING00000018461 ENSCING00000004277 ENSCING00000004290 ENSCING00000019379 ENSCING00000004293 ENSCING00000014086 ENSCING00000023879 ENSCING00000004229 ENSCING00000004251 ENSCING00000002253 ENSCING00000002261 ENSCING00000014105 ENSCING00000004171 ENSCING00000004186 ##22 ENSCING00000021699 ENSCING00000004191 ENSCING00000020625 ENSCING00000004195 ENSCING00000014102 ENSCING00000004199 ENSCING00000004200 ENSCING00000022768 ENSCING00000004204 ENSCING00000004205 ENSCING00000004209 ENSCING00000004212 ENSCING00000004216 ENSCING00000004224 ENSCING00000019516 Ciona savignyi MODERN SPECIES 159 ENSCSAVG00000001228 ENSCSAVG00000001230 ENSCSAVG00000001233 ENSCSAVG00000001238 ENSCSAVG00000001274 ENSCSAVG00000001275 ENSCSAVG00000001279 ENSCSAVG00000001306 ENSCSAVG00000001310 ENSCSAVG00000001312 ENSCSAVG00000001315 ENSCSAVG00000001327 ENSCSAVG00000001349 ENSCSAVG00000001390 ENSCSAVG00000001399 ENSCSAVG00000001400 ##22 ENSCSAVG00000001439 ENSCSAVG00000001444 ENSCSAVG00000001446 ENSCSAVG00000001504 ENSCSAVG00000001521 ENSCSAVG00000001522 ENSCSAVG00000001524 ENSCSAVG00000001526 ENSCSAVG00000001527 ENSCSAVG00000001530 ENSCSAVG00000001532 ENSCSAVG00000001536 ENSCSAVG00000001541 ENSCSAVG00000001543 ENSCSAVG00000001550 Ecdysozoa ANCESTRAL SPECIES ENSGT00390000005197 #22 Fruitfly MODERN SPECIES 16 ProtA (FBgn0013300) ProtB (FBgn0013301) side-II (FBgn0259213) CG3491 (FBgn0028887) mol (FBgn0086711) DCTN5-p25 (FBgn0040228) Ankrd49 (FBgn0261881) NC2beta (FBgn0028926) THG (FBgn0283659) Rnmt (FBgn0286027) GABA-B-R1 (FBgn0260446) CG33310 (FBgn0053310) CG31832 (FBgn0051832) yellow-c (FBgn0041713) CIAPIN1 (FBgn0001977) Su(H) (FBgn0004837) #22 ck (FBgn0000317) CG33679 (FBgn0053679) TfIIS (FBgn0010422) solo (FBgn0283440) vas (FBgn0283442) vig (FBgn0024183) CG15270 (FBgn0028879) CG15269 (FBgn0028878) stc (FBgn0001978) CG4168 (FBgn0028888) Sfp35C (FBgn0259965) CG43230 (FBgn0262875) ZnT35C (FBgn0028516) dao (FBgn0028862) PolD3 (FBgn0283467) Caenorhabditis elegans MODERN SPECIES 3 pfkb-1.2 (WBGene00019295) inx-7 (WBGene00002129) rps-25 (WBGene00004494) K02B2.6 (WBGene00019297) unc-44 (WBGene00006780) C46G7.5 (WBGene00044502) C46G7.2 (WBGene00016722) C46G7.1 (WBGene00016721) pqn-22 (WBGene00004112) kcc-2 (WBGene00019205) cpg-20 (WBGene00019514) ugt-19 (WBGene00019515) ugt-20 (WBGene00019516) K08B4.7 (WBGene00023486) cpi-1 (WBGene00000535) lag-1 (WBGene00002245) #22 M03D4.3 (WBGene00019750) zen-4 (WBGene00006974) M03D4.4 (WBGene00019751) C11D2.3 (WBGene00015701) C11D2.7 (WBGene00015703) C11D2.4 (WBGene00015702) unc-77 (WBGene00006809) asp-9 (WBGene00015700) tkr-2 (WBGene00016761) C49A9.10 (WBGene00016764) ugt-24 (WBGene00016762) C49A9.6 (WBGene00016760) C49A9.5 (WBGene00016759) C49A9.9 (WBGene00016763) C49A9.4 (WBGene00016758)