Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES 13 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00900000143693 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00900000143434 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Myomorpha ANCESTRAL SPECIES 19 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Muroidea ANCESTRAL SPECIES 17 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Murinae ANCESTRAL SPECIES 12 ENSGT00940000160460 ENSGT01100000263543.a ENSGT01100000263511.b.a.b.a.a ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Mus ANCESTRAL SPECIES 14 ENSGT00940000159756 #7 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00530000063435.a.p #27 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Mus_A ANCESTRAL SPECIES 6 ENSGT00940000159756 #7 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00530000063435.a.p #27 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Mus_B ANCESTRAL SPECIES 4 ENSGT00940000159756 #7 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00530000063435.a.p #27 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Mouse MODERN SPECIES 14 5730480H06Rik (ENSMUSG00000029089) #7 Kcnip4 (ENSMUSG00000029088) #8 Adgra3 (ENSMUSG00000029090) #9 Ppargc1a (ENSMUSG00000029167) #10 Dhx15 (ENSMUSG00000029169) #11 Sod3 (ENSMUSG00000072941) #12 Ccdc149 (ENSMUSG00000045790) #13 Lgi2 (ENSMUSG00000039252) #14 Sepsecs (ENSMUSG00000029173) #15 Pi4k2b (ENSMUSG00000029186) #16 Zcchc4 (ENSMUSG00000029179) #17 Anapc4 (ENSMUSG00000029176) #18 Slc34a2 (ENSMUSG00000029188) #19 Sel1l3 (ENSMUSG00000029189) #20 Smim20 (ENSMUSG00000061461) #21 Rbpj (ENSMUSG00000039191) #22 Cckar (ENSMUSG00000029193) #23 Tbc1d19 (ENSMUSG00000039178) #24 Stim2 (ENSMUSG00000039156) #25 Pcdh7 (ENSMUSG00000029108) #26 G6pd2 (ENSMUSG00000089992) #27 Arap2 (ENSMUSG00000037999) #28 Dthd1 (ENSMUSG00000090326) #29 Nwd2 (ENSMUSG00000090061) #30 0610040J01Rik (ENSMUSG00000060512) #31 Rell1 (ENSMUSG00000047881) #32 Pgm2 (ENSMUSG00000029171) #33 Tbc1d1 (ENSMUSG00000029174) #34 Klf3 (ENSMUSG00000029178) #35 Tlr1 (ENSMUSG00000044827) #36 Tlr6 (ENSMUSG00000051498) #37 Mus_C ANCESTRAL SPECIES 4 ENSGT00940000159756 #7 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00530000063435.a.p #27 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Steppe mouse MODERN SPECIES 3046 Slc34a2 (ENSMSIG00000006630) #19 Sel1l3 (ENSMSIG00000006452) #20 Smim20 (ENSMSIG00000006400) #21 Rbpj (ENSMSIG00000006294) #22 Cckar (ENSMSIG00000006255) #23 Tbc1d19 (ENSMSIG00000006182) #24 Stim2 (ENSMSIG00000006059) #25 spretus MODERN SPECIES 14 5730480H06Rik (MGP_SPRETEiJ_G0028205) #7 Kcnip4 (MGP_SPRETEiJ_G0028206) #8 Adgra3 (MGP_SPRETEiJ_G0028207) #9 Ppargc1a (MGP_SPRETEiJ_G0028208) #10 Dhx15 (MGP_SPRETEiJ_G0028209) #11 Sod3 (MGP_SPRETEiJ_G0028210) #12 Ccdc149 (MGP_SPRETEiJ_G0028211) #13 Lgi2 (MGP_SPRETEiJ_G0028212) #14 Sepsecs (MGP_SPRETEiJ_G0028213) #15 Pi4k2b (MGP_SPRETEiJ_G0028214) #16 Zcchc4 (MGP_SPRETEiJ_G0028215) #17 Anapc4 (MGP_SPRETEiJ_G0028216) #18 Slc34a2 (MGP_SPRETEiJ_G0028217) #19 Sel1l3 (MGP_SPRETEiJ_G0028218) #20 Smim20 (MGP_SPRETEiJ_G0028219) #21 MGP_SPRETEiJ_G0028220 #22 Cckar (MGP_SPRETEiJ_G0028221) #23 Tbc1d19 (MGP_SPRETEiJ_G0028222) #24 Stim2 (MGP_SPRETEiJ_G0028223) #25 Pcdh7 (MGP_SPRETEiJ_G0028224) #26 G6pd2 (MGP_SPRETEiJ_G0028225) #27 Arap2 (MGP_SPRETEiJ_G0028226) #28 Dthd1 (MGP_SPRETEiJ_G0028227) #29 Nwd2 (MGP_SPRETEiJ_G0028228) #30 0610040J01Rik (MGP_SPRETEiJ_G0028229) #31 Rell1 (MGP_SPRETEiJ_G0028230) #32 Pgm2 (MGP_SPRETEiJ_G0028231) #33 Tbc1d1 (MGP_SPRETEiJ_G0028232) #34 Klf3 (MGP_SPRETEiJ_G0028233) #35 Tlr6 (MGP_SPRETEiJ_G0028235) #37 Fam114a1 (MGP_SPRETEiJ_G0028236) Ryukyu mouse MODERN SPECIES 14 Kcnip4 (MGP_CAROLIEiJ_G0027210) #8 MGP_CAROLIEiJ_G0027211 Adgra3 (MGP_CAROLIEiJ_G0027212) #9 Ppargc1a (MGP_CAROLIEiJ_G0027213) #10 Dhx15 (MGP_CAROLIEiJ_G0027214) #11 Sod3 (MGP_CAROLIEiJ_G0027215) #12 Ccdc149 (MGP_CAROLIEiJ_G0027216) #13 Lgi2 (MGP_CAROLIEiJ_G0027217) #14 Sepsecs (MGP_CAROLIEiJ_G0027218) #15 Pi4k2b (MGP_CAROLIEiJ_G0027219) #16 Zcchc4 (MGP_CAROLIEiJ_G0027220) #17 Anapc4 (MGP_CAROLIEiJ_G0027221) #18 Slc34a2 (MGP_CAROLIEiJ_G0027222) #19 Sel1l3 (MGP_CAROLIEiJ_G0027223) #20 Smim20 (MGP_CAROLIEiJ_G0027224) #21 MGP_CAROLIEiJ_G0027225 #22 Cckar (MGP_CAROLIEiJ_G0027226) #23 Tbc1d19 (MGP_CAROLIEiJ_G0027227) #24 Stim2 (MGP_CAROLIEiJ_G0027228) #25 Pcdh7 (MGP_CAROLIEiJ_G0027229) #26 G6pd2 (MGP_CAROLIEiJ_G0027230) #27 Arap2 (MGP_CAROLIEiJ_G0027231) #28 Dthd1 (MGP_CAROLIEiJ_G0027232) #29 Nwd2 (MGP_CAROLIEiJ_G0027233) #30 0610040J01Rik (MGP_CAROLIEiJ_G0027234) #31 Rell1 (MGP_CAROLIEiJ_G0027235) #32 Pgm2 (MGP_CAROLIEiJ_G0027236) #33 MGP_CAROLIEiJ_G0027237 Klf3 (MGP_CAROLIEiJ_G0027238) #35 Tlr1 (MGP_CAROLIEiJ_G0027239) #36 Tlr6 (MGP_CAROLIEiJ_G0027240) #37 Shrew mouse MODERN SPECIES 4 Kcnip4 (MGP_PahariEiJ_G0016992) #8 MGP_PahariEiJ_G0016993 Adgra3 (MGP_PahariEiJ_G0016994) #9 Ppargc1a (MGP_PahariEiJ_G0016995) #10 Dhx15 (MGP_PahariEiJ_G0016996) #11 Sod3 (MGP_PahariEiJ_G0016997) #12 Ccdc149 (MGP_PahariEiJ_G0016998) #13 Lgi2 (MGP_PahariEiJ_G0016999) #14 Sepsecs (MGP_PahariEiJ_G0017000) #15 Pi4k2b (MGP_PahariEiJ_G0017001) #16 Zcchc4 (MGP_PahariEiJ_G0017002) #17 Anapc4 (MGP_PahariEiJ_G0017003) #18 Slc34a2 (MGP_PahariEiJ_G0017004) #19 Sel1l3 (MGP_PahariEiJ_G0017005) #20 Smim20 (MGP_PahariEiJ_G0017006) #21 Rbpj (MGP_PahariEiJ_G0017007) #22 Cckar (MGP_PahariEiJ_G0017008) #23 Tbc1d19 (MGP_PahariEiJ_G0017009) #24 Stim2 (MGP_PahariEiJ_G0017010) #25 Pcdh7 (MGP_PahariEiJ_G0017011) #26 G6pd2 (MGP_PahariEiJ_G0017012) #27 Arap2 (MGP_PahariEiJ_G0017013) #28 Dthd1 (MGP_PahariEiJ_G0017014) #29 Nwd2 (MGP_PahariEiJ_G0017015) #30 0610040J01Rik (MGP_PahariEiJ_G0017016) #31 Rell1 (MGP_PahariEiJ_G0017017) #32 Pgm2 (MGP_PahariEiJ_G0017018) #33 Tbc1d1 (MGP_PahariEiJ_G0017019) #34 Klf3 (MGP_PahariEiJ_G0017020) #35 Tlr1 (MGP_PahariEiJ_G0017021) #36 Tlr6 (MGP_PahariEiJ_G0017022) #37 Rat DUPLICATION Rat MODERN SPECIES 5 ENSRNOG00000067137 Ppargc1a (ENSRNOG00000004473) #10 Dhx15 (ENSRNOG00000003844) #11 Sod3 (ENSRNOG00000003869) #12 ENSRNOG00000064588 Ccdc149 (ENSRNOG00000024454) #13 Lgi2 (ENSRNOG00000066201) #14 Sepsecs (ENSRNOG00000049244) #15 Pi4k2b (ENSRNOG00000003924) #16 Zcchc4 (ENSRNOG00000029064) #17 Anapc4 (ENSRNOG00000004130) #18 Slc34a2 (ENSRNOG00000004626) #19 Sel1l3 (ENSRNOG00000004932) #20 AABR07015507.1 (ENSRNOG00000051190) LOC100361259 (ENSRNOG00000055911) Rbpj (ENSRNOG00000046327) #22 Cckar (ENSRNOG00000043124) #23 Tbc1d19 (ENSRNOG00000003003) #24 Stim2 (ENSRNOG00000002956) #25 ENSRNOG00000067114 Pcdh7 (ENSRNOG00000012367) Pcdh7 (ENSRNOG00000063828) #26 ENSRNOG00000067336 AABR07015346.1 (ENSRNOG00000027791) ENSRNOG00000065159 LOC108348204 (ENSRNOG00000063351) ENSRNOG00000065472 Arap2 (ENSRNOG00000056826) #28 AABR07015180.1 (ENSRNOG00000026134) Nwd2 (ENSRNOG00000051837) #30 LOC498368 (ENSRNOG00000002191) #31 Rat MODERN SPECIES 15 Eloc (ENSRNOG00000031730) Ube2w (ENSRNOG00000062415) AABR07046707.1 (ENSRNOG00000042458) ENSRNOG00000069669 Rdh10 (ENSRNOG00000006681) LOC100912291 (ENSRNOG00000047310) LOC297756 (ENSRNOG00000007238) Sbspon (ENSRNOG00000007258) Terf1 (ENSRNOG00000007291) AC125757.1 (ENSRNOG00000028991) AABR07047316.1 (ENSRNOG00000062174) ENSRNOG00000067608 Trpa1 (ENSRNOG00000007354) Msc (ENSRNOG00000007540) Eya1 (ENSRNOG00000007590) Rbpjl2 (ENSRNOG00000007797) #22 Xkr9 (ENSRNOG00000040289) Lactb2 (ENSRNOG00000007829) Tram1 (ENSRNOG00000007892) Ncoa2 (ENSRNOG00000007975) AABR07046763.1 (ENSRNOG00000059973) Prdm14 (ENSRNOG00000021792) Slco5a1 (ENSRNOG00000008966) Sulf1 (ENSRNOG00000009037) RGD1564053 (ENSRNOG00000005375) Prex2 (ENSRNOG00000005391) Cpa6 (ENSRNOG00000005655) Arfgef1 (ENSRNOG00000005703) Cspp1 (ENSRNOG00000021718) Cops5 (ENSRNOG00000006499) Tcf24 (ENSRNOG00000052668) Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT01030000234945 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000162884 #36 ENSGT00390000010054.b Northern American deer mouse MODERN SPECIES 1 Adgra3 (ENSPEMG00000017979) #9 ENSPEMG00000009892 Ppargc1a (ENSPEMG00000010892) #10 Dhx15 (ENSPEMG00000012226) #11 Sod3 (ENSPEMG00000028688) #12 Ccdc149 (ENSPEMG00000012229) #13 Lgi2 (ENSPEMG00000011026) #14 Sepsecs (ENSPEMG00000006742) #15 Pi4k2b (ENSPEMG00000007793) #16 Zcchc4 (ENSPEMG00000013522) #17 ENSPEMG00000029080 Anapc4 (ENSPEMG00000014070) #18 Slc34a2 (ENSPEMG00000007479) #19 Sel1l3 (ENSPEMG00000020373) #20 Smim20 (ENSPEMG00000030098) #21 Rbpj (ENSPEMG00000010386) #22 Cckar (ENSPEMG00000025192) #23 Tbc1d19 (ENSPEMG00000010326) #24 Stim2 (ENSPEMG00000013752) #25 ENSPEMG00000008427 Pcdh7 (ENSPEMG00000012079) #26 ENSPEMG00000025746 ENSPEMG00000026158 ENSPEMG00000029628 ENSPEMG00000014650 ENSPEMG00000029590 Arap2 (ENSPEMG00000017210) #28 Dthd1 (ENSPEMG00000018338) #29 Nwd2 (ENSPEMG00000018695) #30 0610040J01Rik (ENSPEMG00000018765) #31 Rell1 (ENSPEMG00000019052) #32 Prairie vole MODERN SPECIES 349 ENSMOCG00000004401 ENSMOCG00000015030 Vwc2 (ENSMOCG00000022092) Zpbp (ENSMOCG00000005757) Spata48 (ENSMOCG00000014867) Ikzf1 (ENSMOCG00000003097) Fignl1 (ENSMOCG00000010841) Ddc (ENSMOCG00000014117) Grb10 (ENSMOCG00000013383) Cobl (ENSMOCG00000016899) ENSMOCG00000001123 ENSMOCG00000001110 Slc34a2 (ENSMOCG00000000230) #19 Sel1l3 (ENSMOCG00000013009) #20 Smim20 (ENSMOCG00000017669) #21 ENSMOCG00000018816 #22 Cckar (ENSMOCG00000004693) #23 Tbc1d19 (ENSMOCG00000013897) #24 Stim2 (ENSMOCG00000017892) #25 ENSMOCG00000000264 ENSMOCG00000004908 ENSMOCG00000017801 Pcdh7 (ENSMOCG00000019554) #26 ENSMOCG00000016594 ENSMOCG00000017532 Arap2 (ENSMOCG00000008948) #28 Dthd1 (ENSMOCG00000019885) #29 Nwd2 (ENSMOCG00000002726) #30 ENSMOCG00000004195 0610040J01Rik (ENSMOCG00000010145) #31 Rell1 (ENSMOCG00000013662) #32 Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Golden Hamster MODERN SPECIES 632 ENSMAUG00000007284 Adgra3 (ENSMAUG00000012066) #9 ENSMAUG00000007935 ENSMAUG00000006861 Ppargc1a (ENSMAUG00000011811) #10 Dhx15 (ENSMAUG00000011535) #11 Ccdc149 (ENSMAUG00000001813) #13 Lgi2 (ENSMAUG00000020219) #14 Sepsecs (ENSMAUG00000002352) #15 Pi4k2b (ENSMAUG00000015492) #16 Zcchc4 (ENSMAUG00000017115) #17 Anapc4 (ENSMAUG00000015911) #18 Slc34a2 (ENSMAUG00000016072) #19 Sel1l3 (ENSMAUG00000009548) #20 Smim20 (ENSMAUG00000016115) #21 Rbpj (ENSMAUG00000020612) #22 Cckar (ENSMAUG00000020673) #23 Tbc1d19 (ENSMAUG00000018698) #24 Stim2 (ENSMAUG00000018372) #25 Chinese hamster chok1gshd MODERN SPECIES 44 ENSCGRG00001005713 Ppargc1a (ENSCGRG00001015534) #10 Dhx15 (ENSCGRG00001023527) #11 Sod3 (ENSCGRG00001009531) #12 Ccdc149 (ENSCGRG00001001092) #13 Lgi2 (ENSCGRG00001010617) #14 Sepsecs (ENSCGRG00001023389) #15 Pi4k2b (ENSCGRG00001005696) #16 Zcchc4 (ENSCGRG00001014205) #17 ENSCGRG00001016709 Anapc4 (ENSCGRG00001021562) #18 Slc34a2 (ENSCGRG00001019379) #19 Sel1l3 (ENSCGRG00001023792) #20 Smim20 (ENSCGRG00001010352) #21 ENSCGRG00001010832 Rbpj (ENSCGRG00001016640) #22 Cckar (ENSCGRG00001015331) #23 Tbc1d19 (ENSCGRG00001021066) #24 ENSCGRG00001004312 Stim2 (ENSCGRG00001012517) #25 ENSCGRG00001002941 ENSCGRG00001005160 ENSCGRG00001012415 Pcdh7 (ENSCGRG00001017637) #26 ENSCGRG00001018983 ENSCGRG00001009672 Arap2 (ENSCGRG00001019683) #28 Dthd1 (ENSCGRG00001007560) #29 ENSCGRG00001015981 ENSCGRG00001005701 Nwd2 (ENSCGRG00001014796) #30 Upper Galilee mountains blind mole rat MODERN SPECIES 986 Adgra3 (ENSNGAG00000012199) #9 ENSNGAG00000014375 Ppargc1a (ENSNGAG00000015090) #10 Dhx15 (ENSNGAG00000016196) #11 Sod3 (ENSNGAG00000017105) #12 Ccdc149 (ENSNGAG00000017784) #13 Lgi2 (ENSNGAG00000018556) #14 Sepsecs (ENSNGAG00000000721) #15 Pi4k2b (ENSNGAG00000001252) #16 Zcchc4 (ENSNGAG00000015745) #17 ENSNGAG00000018886 ENSNGAG00000019141 Slc34a2 (ENSNGAG00000000788) #19 Sel1l3 (ENSNGAG00000008965) #20 Smim20 (ENSNGAG00000009723) #21 Rbpj (ENSNGAG00000013338) #22 ENSNGAG00000021067 Cckar (ENSNGAG00000021342) #23 Tbc1d19 (ENSNGAG00000000629) #24 ENSNGAG00000007794 Stim2 (ENSNGAG00000016987) #25 Lesser Egyptian jerboa MODERN SPECIES 58 Adgra3 (ENSJJAG00000000786) #9 ENSJJAG00000023479 ENSJJAG00000018377 #10 Dhx15 (ENSJJAG00000010364) #11 ENSJJAG00000010774 Sod3 (ENSJJAG00000019475) #12 Ccdc149 (ENSJJAG00000016740) #13 Lgi2 (ENSJJAG00000021018) #14 Sepsecs (ENSJJAG00000001251) #15 Pi4k2b (ENSJJAG00000021578) #16 Zcchc4 (ENSJJAG00000016627) #17 ENSJJAG00000023054 #18 Slc34a2 (ENSJJAG00000023515) #19 Sel1l3 (ENSJJAG00000018980) #20 Smim20 (ENSJJAG00000020734) #21 Rbpj (ENSJJAG00000024408) #22 Cckar (ENSJJAG00000009819) #23 Tbc1d19 (ENSJJAG00000015623) #24 Stim2 (ENSJJAG00000014478) #25 ENSJJAG00000011152 ENSJJAG00000011305 ENSJJAG00000024218 Pcdh7 (ENSJJAG00000021210) #26 Arap2 (ENSJJAG00000009614) #28 Dthd1 (ENSJJAG00000013536) #29 Nwd2 (ENSJJAG00000011338) #30 Rell1 (ENSJJAG00000015408) #32 Kangaroo rat MODERN SPECIES 327 Kcnip4 (ENSDORG00000015626) #8 ENSDORG00000024508 Adgra3 (ENSDORG00000007520) #9 ENSDORG00000011391 Ppargc1a (ENSDORG00000016276) #10 Dhx15 (ENSDORG00000013848) #11 Ccdc149 (ENSDORG00000005628) #13 Lgi2 (ENSDORG00000005632) #14 Sepsecs (ENSDORG00000012655) #15 Pi4k2b (ENSDORG00000000491) #16 ENSDORG00000012901 #17 ENSDORG00000025086 Slc34a2 (ENSDORG00000016105) #19 Sel1l3 (ENSDORG00000011773) #20 Smim20 (ENSDORG00000028531) #21 Rbpj (ENSDORG00000006352) #22 Cckar (ENSDORG00000006353) #23 Tbc1d19 (ENSDORG00000013790) #24 Stim2 (ENSDORG00000016610) #25 ENSDORG00000028755 #25 ENSDORG00000008260 Pcdh7 (ENSDORG00000029117) #26 ENSDORG00000028110 Arap2 (ENSDORG00000008160) #28 Dthd1 (ENSDORG00000001578) #29 Nwd2 (ENSDORG00000023758) #30 0610040J01Rik (ENSDORG00000011992) #31 Rell1 (ENSDORG00000008354) #32 Pgm2 (ENSDORG00000027647) #33 Tbc1d1 (ENSDORG00000010269) #34 Klf3 (ENSDORG00000023213) #35 Rodentia_A ANCESTRAL SPECIES 20 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00900000143693 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00900000143434 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 Sciuridae ANCESTRAL SPECIES 19 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00900000143693 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00900000143434 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 Eurasian red squirrel MODERN SPECIES 18 KCNIP4 (ENSSVLG00005015491) #8 ADGRA3 (ENSSVLG00005015123) #9 GBA3 (ENSSVLG00005014999) PPARGC1A (ENSSVLG00005014549) #10 ENSSVLG00005014421 #11 SOD3 (ENSSVLG00005014382) #12 CCDC149 (ENSSVLG00005013936) #13 LGI2 (ENSSVLG00005013643) #14 SEPSECS (ENSSVLG00005013560) #15 ENSSVLG00005013482 #16 ZCCHC4 (ENSSVLG00005013382) #17 ANAPC4 (ENSSVLG00005013305) #18 SLC34A2 (ENSSVLG00005013163) #19 SEL1L3 (ENSSVLG00005012722) #20 SMIM20 (ENSSVLG00005012667) #21 RBPJ (ENSSVLG00005012303) #22 CCKAR (ENSSVLG00005012173) #23 TBC1D19 (ENSSVLG00005011905) #24 ENSSVLG00005011823 STIM2 (ENSSVLG00005011778) #25 ENSSVLG00005011737 ENSSVLG00005011695 ENSSVLG00005011631 ENSSVLG00005011572 PCDH7 (ENSSVLG00005011515) #26 ENSSVLG00005011423 ARAP2 (ENSSVLG00005010880) #28 DTHD1 (ENSSVLG00005010509) #29 ENSSVLG00005010441 #30 ENSSVLG00005010374 #30 C4orf19 (ENSSVLG00005010352) #31 Marmotini ANCESTRAL SPECIES 26 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00900000143693 ENSGT00940000155800.e #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00900000143434 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 Alpin marmot MODERN SPECIES 9 KCNIP4 (ENSMMMG00000017078) #8 ADGRA3 (ENSMMMG00000017146) #9 GBA3 (ENSMMMG00000017174) PPARGC1A (ENSMMMG00000017190) #10 ENSMMMG00000017220 DHX15 (ENSMMMG00000017227) #11 CCDC149 (ENSMMMG00000017248) #13 LGI2 (ENSMMMG00000017262) #14 SEPSECS (ENSMMMG00000017270) #15 PI4K2B (ENSMMMG00000017289) #16 ZCCHC4 (ENSMMMG00000017301) #17 ANAPC4 (ENSMMMG00000017319) #18 SLC34A2 (ENSMMMG00000017344) #19 SEL1L3 (ENSMMMG00000017356) #20 SMIM20 (ENSMMMG00000017386) #21 RBPJ (ENSMMMG00000017407) #22 CCKAR (ENSMMMG00000017438) #23 STIM2 (ENSMMMG00000017470) #25 ENSMMMG00000017503 ENSMMMG00000017519 #26 ARAP2 (ENSMMMG00000017527) #28 DTHD1 (ENSMMMG00000017544) #29 NWD2 (ENSMMMG00000017559) #30 ENSMMMG00000017574 C4orf19 (ENSMMMG00000017577) #31 RELL1 (ENSMMMG00000017587) #32 PGM2 (ENSMMMG00000017606) #33 TBC1D1 (ENSMMMG00000017620) #34 ENSMMMG00000017716 KLF3 (ENSMMMG00000017721) #35 TLR10 (ENSMMMG00000017725) Marmotini_b ANCESTRAL SPECIES 33 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00900000143693 ENSGT00940000155800.e #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b.g #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 Arctic ground squirrel MODERN SPECIES 9 ADGRA3 (ENSUPAG00010018174) #9 GBA3 (ENSUPAG00010018197) PPARGC1A (ENSUPAG00010018212) #10 ENSUPAG00010018232 DHX15 (ENSUPAG00010018237) #11 SOD3 (ENSUPAG00010018252) #12 CCDC149 (ENSUPAG00010018257) #13 LGI2 (ENSUPAG00010018269) #14 SEPSECS (ENSUPAG00010018289) #15 PI4K2B (ENSUPAG00010018304) #16 ZCCHC4 (ENSUPAG00010018312) #17 ANAPC4 (ENSUPAG00010018324) #18 ENSUPAG00010018366 #19 SEL1L3 (ENSUPAG00010018378) #20 SMIM20 (ENSUPAG00010018408) #21 RBPJ (ENSUPAG00010018415) #22 CCKAR (ENSUPAG00010018463) #23 TBC1D19 (ENSUPAG00010018475) #24 STIM2 (ENSUPAG00010018502) #25 Squirrel MODERN SPECIES 77 PACRGL (ENSSTOG00000014307) #7 KCNIP4 (ENSSTOG00000014315) #8 ADGRA3 (ENSSTOG00000008272) #9 GBA3 (ENSSTOG00000030967) PPARGC1A (ENSSTOG00000012522) #10 ENSSTOG00000015000 #11 ENSSTOG00000025245 #13 LGI2 (ENSSTOG00000002210) #14 SEPSECS (ENSSTOG00000013399) #15 PI4K2B (ENSSTOG00000016146) #16 ZCCHC4 (ENSSTOG00000023603) #17 ANAPC4 (ENSSTOG00000016156) #18 SLC34A2 (ENSSTOG00000012971) #19 SEL1L3 (ENSSTOG00000010415) #20 SMIM20 (ENSSTOG00000004810) #21 RBPJ (ENSSTOG00000004547) #22 CCKAR (ENSSTOG00000028796) #23 TBC1D19 (ENSSTOG00000024301) #24 STIM2 (ENSSTOG00000014072) #25 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Naked mole-rat female MODERN SPECIES 1 PPARGC1A (ENSHGLG00000007022) #10 DHX15 (ENSHGLG00000006630) #11 SOD3 (ENSHGLG00000047646) #12 CCDC149 (ENSHGLG00000045906) #13 LGI2 (ENSHGLG00000034196) #14 ENSHGLG00000031983 SEPSECS (ENSHGLG00000005236) #15 PI4K2B (ENSHGLG00000005194) #16 ZCCHC4 (ENSHGLG00000005154) #17 ENSHGLG00000039602 ANAPC4 (ENSHGLG00000004987) #18 SLC34A2 (ENSHGLG00000012163) #19 SEL1L3 (ENSHGLG00000011887) #20 ENSHGLG00000042802 ENSHGLG00000048407 RBPJ (ENSHGLG00000010901) #22 CCKAR (ENSHGLG00000041648) #23 TBC1D19 (ENSHGLG00000009465) #24 ENSHGLG00000009110 #25 ENSHGLG00000038509 ENSHGLG00000008412 ENSHGLG00000020704 ENSHGLG00000038050 ENSHGLG00000042856 ENSHGLG00000007929 #26 ENSHGLG00000032804 ENSHGLG00000008642 ARAP2 (ENSHGLG00000001750) #28 DTHD1 (ENSHGLG00000006344) #29 ENSHGLG00000000242 ENSHGLG00000037767 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00940000162224 #12 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Guinea pig MODERN SPECIES 50 ADGRA3 (ENSCPOG00000014179) #9 GBA3 (ENSCPOG00000024273) PPARGC1A (ENSCPOG00000001518) #10 DHX15 (ENSCPOG00000006467) #11 SOD3 (ENSCPOG00000035072) #12 CCDC149 (ENSCPOG00000008895) #13 LGI2 (ENSCPOG00000024161) #14 SEPSECS (ENSCPOG00000035974) #15 PI4K2B (ENSCPOG00000015398) #16 ZCCHC4 (ENSCPOG00000011477) #17 ANAPC4 (ENSCPOG00000013122) #18 SLC34A2 (ENSCPOG00000024165) #19 SEL1L3 (ENSCPOG00000001037) #20 SMIM20 (ENSCPOG00000007684) #21 ENSCPOG00000040682 RBPJ (ENSCPOG00000007041) #22 CCKAR (ENSCPOG00000007046) #23 TBC1D19 (ENSCPOG00000003940) #24 STIM2 (ENSCPOG00000003408) #25 PCDH7 (ENSCPOG00000009659) #26 ARAP2 (ENSCPOG00000003037) #28 DTHD1 (ENSCPOG00000012919) #29 Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00940000159756 #7 ENSGT00940000158985 #8 ENSGT00940000157235 #9 ENSGT00940000160460 ENSGT00950000183137.b.a #10 ENSGT00940000155800 #11 ENSGT00390000015958 #13 ENSGT00940000157294 #14 ENSGT00390000007332 #15 ENSGT00390000010434.a #16 ENSGT00390000012556 #17 ENSGT00390000004612 #18 ENSGT00950000183177.a.a.b #19 ENSGT00940000159983 #20 ENSGT00390000002398 #21 ENSGT00390000005197.a.b #22 ENSGT01100000263563.c.b #23 ENSGT00390000015965 #24 ENSGT00390000000214.a.b #25 ENSGT00940000157221 #26 ENSGT00940000160197 #28 ENSGT00940000153404.b #29 ENSGT00940000153648.b #30 ENSGT00390000013778 #31 ENSGT00940000159709 #32 ENSGT00940000156247 #33 ENSGT00940000157949 #34 ENSGT00940000157456 #35 ENSGT00940000163662 ENSGT00940000162884 #36 ENSGT00940000162201 #37 Degu MODERN SPECIES 47 KCNIP4 (ENSODEG00000009132) #8 ADGRA3 (ENSODEG00000008912) #9 GBA3 (ENSODEG00000007983) ENSODEG00000008409 #10 ENSODEG00000008891 #11 ENSODEG00000008421 #13 LGI2 (ENSODEG00000009206) #14 SEPSECS (ENSODEG00000010607) #15 PI4K2B (ENSODEG00000008999) #16 ENSODEG00000007449 #17 ENSODEG00000006972 ENSODEG00000019525 SLC34A2 (ENSODEG00000010839) #19 SEL1L3 (ENSODEG00000008196) #20 ENSODEG00000007321 #21 ENSODEG00000007277 #22 CCKAR (ENSODEG00000007359) #23 TBC1D19 (ENSODEG00000007019) #24 ENSODEG00000008773 #25 ENSODEG00000006518 #25 ENSODEG00000019413 ENSODEG00000006666 ENSODEG00000007600 PCDH7 (ENSODEG00000007387) #26 ENSODEG00000006993 ENSODEG00000019660 ARAP2 (ENSODEG00000006699) #28 DTHD1 (ENSODEG00000007001) #29 Long-tailed chinchilla MODERN SPECIES 150 SEPSECS (ENSCLAG00000001790) #15 PI4K2B (ENSCLAG00000001759) #16 ZCCHC4 (ENSCLAG00000003884) #17 ANAPC4 (ENSCLAG00000003544) #18 ENSCLAG00000002958 SLC34A2 (ENSCLAG00000002636) #19 SEL1L3 (ENSCLAG00000002362) #20 SMIM20 (ENSCLAG00000002089) #21 RBPJ (ENSCLAG00000002065) #22 CCKAR (ENSCLAG00000001729) #23 TBC1D19 (ENSCLAG00000001699) #24 STIM2 (ENSCLAG00000002849) #25 PCDH7 (ENSCLAG00000002605) #26 ARAP2 (ENSCLAG00000012467) #28 DTHD1 (ENSCLAG00000011952) #29 NWD2 (ENSCLAG00000010818) #30 C4orf19 (ENSCLAG00000010706) #31 RELL1 (ENSCLAG00000010401) #32 PGM2 (ENSCLAG00000010266) #33 TBC1D1 (ENSCLAG00000002236) #34 KLF3 (ENSCLAG00000004459) #35 TLR10 (ENSCLAG00000004336) TLR1 (ENSCLAG00000017579) #36 TLR6 (ENSCLAG00000017630) #37 Rodentia DUPLICATION Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Degu MODERN SPECIES 60 ENSODEG00000008774 PUM2 (ENSODEG00000007823) ENSODEG00000010362 RHOB (ENSODEG00000019841) HS1BP3 (ENSODEG00000010003) GDF7 (ENSODEG00000008847) ENSODEG00000008523 APOB (ENSODEG00000008337) ENSODEG00000019494 ENSODEG00000007994 ENSODEG00000019450 ENSODEG00000007428 KLHL29 (ENSODEG00000009928) ENSODEG00000008786 ENSODEG00000009834 ENSODEG00000008643 ##22 ENSODEG00000007644 ENSODEG00000007455 ENSODEG00000008882 ENSODEG00000010244 SF3B6 (ENSODEG00000009547) ENSODEG00000007981 PFN4 (ENSODEG00000008303) ENSODEG00000007545 ENSODEG00000007584 NCOA1 (ENSODEG00000008181) PTRHD1 (ENSODEG00000007805) ADCY3 (ENSODEG00000007982) DNAJC27 (ENSODEG00000007488) EFR3B (ENSODEG00000007566) POMC (ENSODEG00000010910) Naked mole-rat female MODERN SPECIES 15 ENSHGLG00000010031 ENSHGLG00000040318 CCP110 (ENSHGLG00000018807) VPS35L (ENSHGLG00000018818) KNOP1 (ENSHGLG00000049260) IQCK (ENSHGLG00000014331) ENSHGLG00000049053 GPR139 (ENSHGLG00000034334) ENSHGLG00000050561 ENSHGLG00000009974 UMOD (ENSHGLG00000006685) PDILT (ENSHGLG00000008450) ACSM5 (ENSHGLG00000010732) ENSHGLG00000011441 ENSHGLG00000037112 ENSHGLG00000012971 ##22 ENSHGLG00000006014 ENSHGLG00000049216 ENSHGLG00000007282 ENSHGLG00000049148 ENSHGLG00000007912 BFAR (ENSHGLG00000008907) PARN (ENSHGLG00000010886) MRTFB (ENSHGLG00000019009) ENSHGLG00000049641 ERCC4 (ENSHGLG00000016661) ENSHGLG00000017807 ENSHGLG00000035327 SHISA9 (ENSHGLG00000013207) CPPED1 (ENSHGLG00000011022) SNX29 (ENSHGLG00000012310) Rodentia_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 1885 Apobec1 (ENSNGAG00000022607) Gdf3 (ENSNGAG00000018140) ENSNGAG00000011538 Slc2a3 (ENSNGAG00000012042) Foxj2 (ENSNGAG00000017980) C3ar1 (ENSNGAG00000014090) Necap1 (ENSNGAG00000015511) Clec4a1 (ENSNGAG00000023338) ENSNGAG00000023388 ENSNGAG00000009568 Clec4n (ENSNGAG00000022656) Clec4d (ENSNGAG00000003581) Clec4e (ENSNGAG00000010318) Cd163 (ENSNGAG00000004434) ENSNGAG00000023205 ENSNGAG00000023425 ##22 Pex5 (ENSNGAG00000022852) Clstn3 (ENSNGAG00000022664) ENSNGAG00000018451 C1rl (ENSNGAG00000023384) ENSNGAG00000021958 ENSNGAG00000019975 Lpcat3 (ENSNGAG00000019456) Emg1 (ENSNGAG00000022592) ENSNGAG00000023489 Ptpn6 (ENSNGAG00000006668) Grcc10 (ENSNGAG00000015624) Atn1 (ENSNGAG00000003346) Eno2 (ENSNGAG00000019726) Lrrc23 (ENSNGAG00000023434) ENSNGAG00000019265 Upper Galilee mountains blind mole rat MODERN SPECIES 1012 ENSNGAG00000020113 ENSNGAG00000019133 ##22 ENSNGAG00000001446 Pcdh10 (ENSNGAG00000014347) Pabpc4l (ENSNGAG00000001502) Pcdh18 (ENSNGAG00000002486) Slc7a11 (ENSNGAG00000012488) Muroidea_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000005197.a.a.a ##22 Prairie vole MODERN SPECIES 147 ENSMOCG00000001414 ENSMOCG00000000686 ENSMOCG00000000319 ##22 ENSMOCG00000000225 ENSMOCG00000022343 Tmem47 (ENSMOCG00000000092) Rodentia ANCESTRAL SPECIES ENSGT00390000005197.a.a.b ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00390000005197.a.a.b ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00390000005197.a.a.b ##22 Naked mole-rat female MODERN SPECIES 3 TRPM3 (ENSHGLG00000009801) ENSHGLG00000034795 ENSHGLG00000003100 TMEM2 (ENSHGLG00000013965) ABHD17B (ENSHGLG00000032723) ENSHGLG00000015860 ENSHGLG00000044859 ENSHGLG00000013674 GDA (ENSHGLG00000012950) ENSHGLG00000041124 ENSHGLG00000033487 TMC1 (ENSHGLG00000015834) ENSHGLG00000036208 ENSHGLG00000037149 ENSHGLG00000000865 ENSHGLG00000034386 ##22 ENSHGLG00000001938 ALDH1A1 (ENSHGLG00000010105) ANXA1 (ENSHGLG00000000400) ENSHGLG00000047470 ENSHGLG00000031934 RORB (ENSHGLG00000000695) ENSHGLG00000040715 TRPM6 (ENSHGLG00000003851) C9orf40 (ENSHGLG00000000280) ENSHGLG00000050025 ENSHGLG00000033948 CARNMT1 (ENSHGLG00000000378) ENSHGLG00000002210 ENSHGLG00000044788 ENSHGLG00000049071