Mus	ANCESTRAL SPECIES	3	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00390000003768 #23	ENSGT00940000154469.a.a.a.a.a.b ##24	ENSGT00940000154712.c.a.b.b	ENSGT00940000161688.f.b.a.b	ENSGT00510000049215 #25	ENSGT00940000161800 #26	ENSGT00950000183083.b #27	ENSGT00940000158724 #28	ENSGT00940000157630.a.a.a.a #29	ENSGT00940000157630.a.a.a.b #30	ENSGT00940000157630.a.a.b #31	ENSGT00940000157630.a.b #32	ENSGT00940000163565 #33	ENSGT00940000157630.b.a #34	ENSGT00940000162160 #35
Mus_A	ANCESTRAL SPECIES	3	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00390000003768 #23	ENSGT00940000154469.a.a.a.a.a.b ##24	ENSGT00940000154712.c.a.b.b	ENSGT00940000161688.f.b.a.b	ENSGT00510000049215 #25	ENSGT00940000161800 #26	ENSGT00950000183083.b #27	ENSGT00940000158724 #28	ENSGT00940000157630.a.a.a.a #29	ENSGT00940000157630.a.a.a.b #30	ENSGT00940000157630.a.a.b #31	ENSGT00940000157630.a.b #32	ENSGT00940000163565 #33	ENSGT00940000157630.b.a #34	ENSGT00940000162160 #35
Ryukyu mouse	MODERN SPECIES	13	Mtor (MGP_CAROLIEiJ_G0026800) #7	Ubiad1 (MGP_CAROLIEiJ_G0026799) #8	Disp3 (MGP_CAROLIEiJ_G0026798) #9	Fbxo2 (MGP_CAROLIEiJ_G0026797) #10	Fbxo44 (MGP_CAROLIEiJ_G0026796) #11	Fbxo6 (MGP_CAROLIEiJ_G0026795) #12	MGP_CAROLIEiJ_G0026794 #13	Draxin (MGP_CAROLIEiJ_G0026793) #14	Agtrap (MGP_CAROLIEiJ_G0026792) #15	Mthfr (MGP_CAROLIEiJ_G0026791) #16	Clcn6 (MGP_CAROLIEiJ_G0026790) #17	Nppa (MGP_CAROLIEiJ_G0026789) #18	Nppb (MGP_CAROLIEiJ_G0026788) #19	2510039O18Rik (MGP_CAROLIEiJ_G0026787) #20	Plod1 (MGP_CAROLIEiJ_G0026786) #21	Mfn2 (MGP_CAROLIEiJ_G0026785) #22	Miip (MGP_CAROLIEiJ_G0026784) #23	MGP_CAROLIEiJ_G0026783 #24	Tnfrsf8 (MGP_CAROLIEiJ_G0026782) #25	Tnfrsf1b (MGP_CAROLIEiJ_G0026781) #26	Vps13d (MGP_CAROLIEiJ_G0026780) #27	Dhrs3 (MGP_CAROLIEiJ_G0026779) #28	Aadacl4fm5 (MGP_CAROLIEiJ_G0026778) #29	AAdacl4fm3 (MGP_CAROLIEiJ_G0026777) #30	Aadacl4fm4 (MGP_CAROLIEiJ_G0026776) #31	Aadacl4 (MGP_CAROLIEiJ_G0026775) #32	Aadacl4fm2 (MGP_CAROLIEiJ_G0026774) #33	Aadacl4fm1 (MGP_CAROLIEiJ_G0026773) #34	Aadacl3 (MGP_CAROLIEiJ_G0026772) #35	MGP_CAROLIEiJ_G0026771 #36	Cfap107 (MGP_CAROLIEiJ_G0026770) #37
Mus_B	ANCESTRAL SPECIES	5	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00940000168197	ENSGT00390000003768 #23	ENSGT00940000154469.a.a.a.a.a.b ##24	ENSGT00940000154712.c.a.b.b.d.a.a.a.b	ENSGT00940000154712.c.a.b.b.d.a.a.a.a	ENSGT00510000049215 #25	ENSGT00940000161800 #26	ENSGT00950000183083.b #27	ENSGT00940000158724 #28	ENSGT00940000157630.a.a.a.a #29	ENSGT00940000157630.a.a.a.b #30	ENSGT00940000157630.a.a.b #31	ENSGT00940000157630.a.b #32	ENSGT00940000163565 #33	ENSGT00940000157630.b.a #34
Mus_C	ANCESTRAL SPECIES	2	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00940000168197	ENSGT00390000003768 #23	ENSGT00940000154469.a.a.a.a.a.b ##24	ENSGT00510000049215 #25	ENSGT00940000161800 #26	ENSGT00950000183083.b #27	ENSGT00940000158724 #28	ENSGT00940000157630.a.a.a.a #29	ENSGT00940000157630.a.a.a.b #30	ENSGT00940000157630.a.a.b #31	ENSGT00940000157630.a.b #32	ENSGT00940000163565 #33	ENSGT00940000157630.b.a #34	ENSGT00940000162160 #35	ENSGT00860000136337 #36
Steppe mouse	MODERN SPECIES	3147	Mtor (ENSMSIG00000011592) #7	Ubiad1 (ENSMSIG00000011575) #8	Disp3 (ENSMSIG00000011555) #9	Fbxo2 (ENSMSIG00000011541) #10	ENSMSIG00000011464 #11	Mad2l2 (ENSMSIG00000011418) #13	Draxin (ENSMSIG00000011398) #14	ENSMSIG00000011372	Agtrap (ENSMSIG00000011355) #15	Mthfr (ENSMSIG00000011288) #16	Clcn6 (ENSMSIG00000011225) #17	Nppa (ENSMSIG00000011213) #18	Nppb (ENSMSIG00000011201) #19	2510039O18Rik (ENSMSIG00000011176) #20	Plod1 (ENSMSIG00000011130) #21	Mfn2 (ENSMSIG00000011070) #22	Miip (ENSMSIG00000011005) #23	Zfp933 (ENSMSIG00000010977) ##24
spretus	MODERN SPECIES	13	Mtor (MGP_SPRETEiJ_G0027793) #7	Ubiad1 (MGP_SPRETEiJ_G0027792) #8	Disp3 (MGP_SPRETEiJ_G0027791) #9	Fbxo2 (MGP_SPRETEiJ_G0027790) #10	Fbxo44 (MGP_SPRETEiJ_G0027789) #11	Fbxo6 (MGP_SPRETEiJ_G0027788) #12	Mad2l2 (MGP_SPRETEiJ_G0027787) #13	Draxin (MGP_SPRETEiJ_G0027786) #14	Agtrap (MGP_SPRETEiJ_G0027785) #15	Mthfr (MGP_SPRETEiJ_G0027784) #16	Clcn6 (MGP_SPRETEiJ_G0027783) #17	Nppa (MGP_SPRETEiJ_G0027782) #18	Nppb (MGP_SPRETEiJ_G0027781) #19	2510039O18Rik (MGP_SPRETEiJ_G0027780) #20	Plod1 (MGP_SPRETEiJ_G0027779) #21	Mfn2 (MGP_SPRETEiJ_G0027778) #22	Fv1 (MGP_SPRETEiJ_G0027777)	Miip (MGP_SPRETEiJ_G0027776) #23	Zfp933 (MGP_SPRETEiJ_G0027775) ##24	Tnfrsf8 (MGP_SPRETEiJ_G0027774) #25	Tnfrsf1b (MGP_SPRETEiJ_G0027773) #26	Vps13d (MGP_SPRETEiJ_G0027772) #27	Dhrs3 (MGP_SPRETEiJ_G0027771) #28	Aadacl4fm5 (MGP_SPRETEiJ_G0027770) #29	AAdacl4fm3 (MGP_SPRETEiJ_G0027769) #30	Aadacl4fm4 (MGP_SPRETEiJ_G0027768) #31	MGP_SPRETEiJ_G0027767 #32	Aadacl4fm2 (MGP_SPRETEiJ_G0027766) #33	Aadacl4fm1 (MGP_SPRETEiJ_G0027765) #34	Aadacl3 (MGP_SPRETEiJ_G0027764) #35	MGP_SPRETEiJ_G0027763 #36
Mouse	MODERN SPECIES	13	Mtor (ENSMUSG00000028991) #7	Ubiad1 (ENSMUSG00000047719) #8	Disp3 (ENSMUSG00000041544) #9	Fbxo2 (ENSMUSG00000041556) #10	Fbxo44 (ENSMUSG00000029001) #11	Fbxo6 (ENSMUSG00000055401) #12	Mad2l2 (ENSMUSG00000029003) #13	Draxin (ENSMUSG00000029005) #14	Agtrap (ENSMUSG00000029007) #15	Mthfr (ENSMUSG00000029009) #16	Clcn6 (ENSMUSG00000029016) #17	Nppa (ENSMUSG00000041616) #18	Nppb (ENSMUSG00000029019) #19	2510039O18Rik (ENSMUSG00000044496) #20	Plod1 (ENSMUSG00000019055) #21	Mfn2 (ENSMUSG00000029020) #22	Fv1 (ENSMUSG00000070583)	Miip (ENSMUSG00000029022) #23	Zfp933 (ENSMUSG00000059423) ##24	Zfp984 (ENSMUSG00000078495)	Zfp534 (ENSMUSG00000062518)	Zfp979 (ENSMUSG00000066000)	Zfp985 (ENSMUSG00000065999)	Zfp982 (ENSMUSG00000078496)	Zfp978 (ENSMUSG00000078497)	Zfp988 (ENSMUSG00000078498)	Zfp991 (ENSMUSG00000067916)	Rex2 (ENSMUSG00000067919)	Zfp989 (ENSMUSG00000086147)	Gm21411 (ENSMUSG00000045699)	Zfp993 (ENSMUSG00000063245)
Shrew mouse	MODERN SPECIES	19	Mtor (MGP_PahariEiJ_G0029148) #7	Ubiad1 (MGP_PahariEiJ_G0029147) #8	Disp3 (MGP_PahariEiJ_G0029146) #9	Fbxo2 (MGP_PahariEiJ_G0029145) #10	MGP_PahariEiJ_G0029144 #11	Fbxo6 (MGP_PahariEiJ_G0029143) #12	Mad2l2 (MGP_PahariEiJ_G0029142) #13	Draxin (MGP_PahariEiJ_G0029141) #14	Agtrap (MGP_PahariEiJ_G0029140) #15	Mthfr (MGP_PahariEiJ_G0029139) #16	Clcn6 (MGP_PahariEiJ_G0029138) #17	Nppa (MGP_PahariEiJ_G0029137) #18	Nppb (MGP_PahariEiJ_G0029136) #19	2510039O18Rik (MGP_PahariEiJ_G0029135) #20	Plod1 (MGP_PahariEiJ_G0029134) #21	Mfn2 (MGP_PahariEiJ_G0029133) #22	Miip (MGP_PahariEiJ_G0029132) #23	MGP_PahariEiJ_G0029131 ##24	Tnfrsf8 (MGP_PahariEiJ_G0029130) #25	Tnfrsf1b (MGP_PahariEiJ_G0029129) #26	Vps13d (MGP_PahariEiJ_G0029128) #27	Dhrs3 (MGP_PahariEiJ_G0029127) #28	Aadacl4fm5 (MGP_PahariEiJ_G0029126) #29	AAdacl4fm3 (MGP_PahariEiJ_G0029125) #30	Aadacl4fm4 (MGP_PahariEiJ_G0029124) #31	Aadacl4 (MGP_PahariEiJ_G0029123) #32	Aadacl4fm2 (MGP_PahariEiJ_G0029122) #33	Aadacl4fm1 (MGP_PahariEiJ_G0029121) #34	Aadacl3 (MGP_PahariEiJ_G0029120) #35	MGP_PahariEiJ_G0029119	Cfap107 (MGP_PahariEiJ_G0029118) #37