Murinae	ANCESTRAL SPECIES	2	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00390000003768 #24	ENSGT00940000154469.a.a.a.a.a.b #25	ENSGT00940000154712.c.a.b.b #26	ENSGT00940000161688.f.b.a.b #30	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.a.a	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160
Mus	ANCESTRAL SPECIES	3	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00390000003768 #24	ENSGT00940000154469.a.a.a.a.a.b #25	ENSGT00940000154712.c.a.b.b #26	ENSGT00940000161688.f.b.a.b #30	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.a.a	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160
Mus_A	ANCESTRAL SPECIES	3	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00390000003768 #24	ENSGT00940000154469.a.a.a.a.a.b #25	ENSGT00940000154712.c.a.b.b #26	ENSGT00940000161688.f.b.a.b #30	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.a.a	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160
Mus_B	ANCESTRAL SPECIES	5	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00940000168197 #23	ENSGT00390000003768 #24	ENSGT00940000154469.a.a.a.a.a.b #25	ENSGT00940000154712.c.a.b.b.d.a.a.a.b #26	ENSGT00940000154712.c.a.b.b.d.a.a.a.a ##26	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.a.a	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a
Mouse	MODERN SPECIES	13	Mtor (ENSMUSG00000028991) #7	Ubiad1 (ENSMUSG00000047719) #8	Disp3 (ENSMUSG00000041544) #9	Fbxo2 (ENSMUSG00000041556) #10	Fbxo44 (ENSMUSG00000029001) #11	Fbxo6 (ENSMUSG00000055401) #12	Mad2l2 (ENSMUSG00000029003) #13	Draxin (ENSMUSG00000029005) #14	Agtrap (ENSMUSG00000029007) #15	Mthfr (ENSMUSG00000029009) #16	Clcn6 (ENSMUSG00000029016) #17	Nppa (ENSMUSG00000041616) #18	Nppb (ENSMUSG00000029019) #19	2510039O18Rik (ENSMUSG00000044496) #20	Plod1 (ENSMUSG00000019055) #21	Mfn2 (ENSMUSG00000029020) #22	Fv1 (ENSMUSG00000070583) #23	Miip (ENSMUSG00000029022) #24	Zfp933 (ENSMUSG00000059423) #25	Zfp984 (ENSMUSG00000078495) #26	Zfp534 (ENSMUSG00000062518) #27	Zfp979 (ENSMUSG00000066000) #28	Zfp985 (ENSMUSG00000065999) #29	Zfp982 (ENSMUSG00000078496) #30	Zfp978 (ENSMUSG00000078497) #31	Zfp988 (ENSMUSG00000078498) #32	Zfp991 (ENSMUSG00000067916) #33	Rex2 (ENSMUSG00000067919) #34	Zfp989 (ENSMUSG00000086147) #35	Gm21411 (ENSMUSG00000045699) #36	Zfp993 (ENSMUSG00000063245) #37
Mus_C	ANCESTRAL SPECIES	2	ENSGT00930000151037 #7	ENSGT00390000012439 #8	ENSGT00940000157931 #9	ENSGT00940000160929 #10	ENSGT00940000159408 #11	ENSGT00940000159980 #12	ENSGT00940000153395.b #13	ENSGT00390000013828 #14	ENSGT00390000017402 #15	ENSGT00390000012490 #16	ENSGT00940000159291 #17	ENSGT00940000154513.B #18	ENSGT00940000154513.A #19	ENSGT00390000007643 #20	ENSGT01030000234558.A.a.a.b #21	ENSGT00390000013727.c #22	ENSGT00940000168197 #23	ENSGT00390000003768 #24	ENSGT00940000154469.a.a.a.a.a.b #25	ENSGT00510000049215	ENSGT00940000161800	ENSGT00950000183083.b	ENSGT00940000158724	ENSGT00940000157630.a.a.a.a	ENSGT00940000157630.a.a.a.b	ENSGT00940000157630.a.a.b	ENSGT00940000157630.a.b	ENSGT00940000163565	ENSGT00940000157630.b.a	ENSGT00940000162160	ENSGT00860000136337
Steppe mouse	MODERN SPECIES	3147	Mtor (ENSMSIG00000011592) #7	Ubiad1 (ENSMSIG00000011575) #8	Disp3 (ENSMSIG00000011555) #9	Fbxo2 (ENSMSIG00000011541) #10	ENSMSIG00000011464 #11	Mad2l2 (ENSMSIG00000011418) #13	Draxin (ENSMSIG00000011398) #14	ENSMSIG00000011372	Agtrap (ENSMSIG00000011355) #15	Mthfr (ENSMSIG00000011288) #16	Clcn6 (ENSMSIG00000011225) #17	Nppa (ENSMSIG00000011213) #18	Nppb (ENSMSIG00000011201) #19	2510039O18Rik (ENSMSIG00000011176) #20	Plod1 (ENSMSIG00000011130) #21	Mfn2 (ENSMSIG00000011070) #22	Miip (ENSMSIG00000011005) #24	Zfp933 (ENSMSIG00000010977) #25
spretus	MODERN SPECIES	13	Mtor (MGP_SPRETEiJ_G0027793) #7	Ubiad1 (MGP_SPRETEiJ_G0027792) #8	Disp3 (MGP_SPRETEiJ_G0027791) #9	Fbxo2 (MGP_SPRETEiJ_G0027790) #10	Fbxo44 (MGP_SPRETEiJ_G0027789) #11	Fbxo6 (MGP_SPRETEiJ_G0027788) #12	Mad2l2 (MGP_SPRETEiJ_G0027787) #13	Draxin (MGP_SPRETEiJ_G0027786) #14	Agtrap (MGP_SPRETEiJ_G0027785) #15	Mthfr (MGP_SPRETEiJ_G0027784) #16	Clcn6 (MGP_SPRETEiJ_G0027783) #17	Nppa (MGP_SPRETEiJ_G0027782) #18	Nppb (MGP_SPRETEiJ_G0027781) #19	2510039O18Rik (MGP_SPRETEiJ_G0027780) #20	Plod1 (MGP_SPRETEiJ_G0027779) #21	Mfn2 (MGP_SPRETEiJ_G0027778) #22	Fv1 (MGP_SPRETEiJ_G0027777) #23	Miip (MGP_SPRETEiJ_G0027776) #24	Zfp933 (MGP_SPRETEiJ_G0027775) #25	Tnfrsf8 (MGP_SPRETEiJ_G0027774)	Tnfrsf1b (MGP_SPRETEiJ_G0027773)	Vps13d (MGP_SPRETEiJ_G0027772)	Dhrs3 (MGP_SPRETEiJ_G0027771)	Aadacl4fm5 (MGP_SPRETEiJ_G0027770)	AAdacl4fm3 (MGP_SPRETEiJ_G0027769)	Aadacl4fm4 (MGP_SPRETEiJ_G0027768)	MGP_SPRETEiJ_G0027767	Aadacl4fm2 (MGP_SPRETEiJ_G0027766)	Aadacl4fm1 (MGP_SPRETEiJ_G0027765)	Aadacl3 (MGP_SPRETEiJ_G0027764)	MGP_SPRETEiJ_G0027763
Ryukyu mouse	MODERN SPECIES	13	Mtor (MGP_CAROLIEiJ_G0026800) #7	Ubiad1 (MGP_CAROLIEiJ_G0026799) #8	Disp3 (MGP_CAROLIEiJ_G0026798) #9	Fbxo2 (MGP_CAROLIEiJ_G0026797) #10	Fbxo44 (MGP_CAROLIEiJ_G0026796) #11	Fbxo6 (MGP_CAROLIEiJ_G0026795) #12	MGP_CAROLIEiJ_G0026794 #13	Draxin (MGP_CAROLIEiJ_G0026793) #14	Agtrap (MGP_CAROLIEiJ_G0026792) #15	Mthfr (MGP_CAROLIEiJ_G0026791) #16	Clcn6 (MGP_CAROLIEiJ_G0026790) #17	Nppa (MGP_CAROLIEiJ_G0026789) #18	Nppb (MGP_CAROLIEiJ_G0026788) #19	2510039O18Rik (MGP_CAROLIEiJ_G0026787) #20	Plod1 (MGP_CAROLIEiJ_G0026786) #21	Mfn2 (MGP_CAROLIEiJ_G0026785) #22	Miip (MGP_CAROLIEiJ_G0026784) #24	MGP_CAROLIEiJ_G0026783 ##25	Tnfrsf8 (MGP_CAROLIEiJ_G0026782)	Tnfrsf1b (MGP_CAROLIEiJ_G0026781)	Vps13d (MGP_CAROLIEiJ_G0026780)	Dhrs3 (MGP_CAROLIEiJ_G0026779)	Aadacl4fm5 (MGP_CAROLIEiJ_G0026778)	AAdacl4fm3 (MGP_CAROLIEiJ_G0026777)	Aadacl4fm4 (MGP_CAROLIEiJ_G0026776)	Aadacl4 (MGP_CAROLIEiJ_G0026775)	Aadacl4fm2 (MGP_CAROLIEiJ_G0026774)	Aadacl4fm1 (MGP_CAROLIEiJ_G0026773)	Aadacl3 (MGP_CAROLIEiJ_G0026772)	MGP_CAROLIEiJ_G0026771	Cfap107 (MGP_CAROLIEiJ_G0026770)
Shrew mouse	MODERN SPECIES	19	Mtor (MGP_PahariEiJ_G0029148) #7	Ubiad1 (MGP_PahariEiJ_G0029147) #8	Disp3 (MGP_PahariEiJ_G0029146) #9	Fbxo2 (MGP_PahariEiJ_G0029145) #10	MGP_PahariEiJ_G0029144 #11	Fbxo6 (MGP_PahariEiJ_G0029143) #12	Mad2l2 (MGP_PahariEiJ_G0029142) #13	Draxin (MGP_PahariEiJ_G0029141) #14	Agtrap (MGP_PahariEiJ_G0029140) #15	Mthfr (MGP_PahariEiJ_G0029139) #16	Clcn6 (MGP_PahariEiJ_G0029138) #17	Nppa (MGP_PahariEiJ_G0029137) #18	Nppb (MGP_PahariEiJ_G0029136) #19	2510039O18Rik (MGP_PahariEiJ_G0029135) #20	Plod1 (MGP_PahariEiJ_G0029134) #21	Mfn2 (MGP_PahariEiJ_G0029133) #22	Miip (MGP_PahariEiJ_G0029132) #24	MGP_PahariEiJ_G0029131 ##25	Tnfrsf8 (MGP_PahariEiJ_G0029130)	Tnfrsf1b (MGP_PahariEiJ_G0029129)	Vps13d (MGP_PahariEiJ_G0029128)	Dhrs3 (MGP_PahariEiJ_G0029127)	Aadacl4fm5 (MGP_PahariEiJ_G0029126)	AAdacl4fm3 (MGP_PahariEiJ_G0029125)	Aadacl4fm4 (MGP_PahariEiJ_G0029124)	Aadacl4 (MGP_PahariEiJ_G0029123)	Aadacl4fm2 (MGP_PahariEiJ_G0029122)	Aadacl4fm1 (MGP_PahariEiJ_G0029121)	Aadacl3 (MGP_PahariEiJ_G0029120)	MGP_PahariEiJ_G0029119	Cfap107 (MGP_PahariEiJ_G0029118)
Rat	MODERN SPECIES	15	Ubiad1 (ENSRNOG00000009575) #8	Disp3 (ENSRNOG00000026447) #9	Fbxo2 (ENSRNOG00000009409) #10	Fbxo44 (ENSRNOG00000009298) #11	Fbxo6 (ENSRNOG00000009217) #12	Mad2l2 (ENSRNOG00000009134) #13	Rpl35a (ENSRNOG00000031641)	Draxin (ENSRNOG00000008911) #14	Agtrap (ENSRNOG00000008619) #15	Mthfr (ENSRNOG00000008553) #16	Clcn6 (ENSRNOG00000008345) #17	Nppa (ENSRNOG00000008176) #18	Nppb (ENSRNOG00000008141) #19	Kiaa2013 (ENSRNOG00000007968) #20	Plod1 (ENSRNOG00000007763) #21	Mfn2 (ENSRNOG00000046424) #22	Miip (ENSRNOG00000024139) #24	Zfp933 (ENSRNOG00000056374) #25	RGD1565622 (ENSRNOG00000062859) #26	ENSRNOG00000068760	RGD1565622 (ENSRNOG00000033792) #26	ENSRNOG00000068633	ENSRNOG00000070045	ENSRNOG00000063649 ##30	Rex2 (ENSRNOG00000062461) #26	ENSRNOG00000070082 #26	LOC500584 (ENSRNOG00000063088) #26	ENSRNOG00000070363	LOC691254 (ENSRNOG00000025261) #26	LOC100361693 (ENSRNOG00000055061) #26	ENSRNOG00000068796 #26