Boreoeutheria	ANCESTRAL SPECIES		ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00910000148470	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Laurasiatheria	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Laurasiatheria_a	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Laurasiatheria_b	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Carnivora	ANCESTRAL SPECIES	1	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36
Felidae	ANCESTRAL SPECIES	10	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36	ENSGT00940000157092 #37
Panthera	ANCESTRAL SPECIES	4	ENSGT00940000158854.g.a #7	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36	ENSGT00940000157092 #37
Panthera_a	ANCESTRAL SPECIES	11	ENSGT00940000158854.g.a #7	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36	ENSGT00940000157092 #37
leopard	MODERN SPECIES	16	ENSPPRG00000017420 #7	NEGR1 (ENSPPRG00000010074) #8	ZRANB2 (ENSPPRG00000008962) #9	PTGER3 (ENSPPRG00000007485) #10	CTH (ENSPPRG00000005228) #11	ANKRD13C (ENSPPRG00000003766) #12	SRSF11 (ENSPPRG00000002720) #13	LRRC40 (ENSPPRG00000000254) #14	ENSPPRG00000022341 #15	ENSPPRG00000017380 #16	DEPDC1 (ENSPPRG00000014611) #17	RPE65 (ENSPPRG00000013670) #18	WLS (ENSPPRG00000013013) #19	GNG12 (ENSPPRG00000009675) #20	GADD45A (ENSPPRG00000009546) #21	SERBP1 (ENSPPRG00000008971) #22	IL12RB2 (ENSPPRG00000008198) #23	IL23R (ENSPPRG00000004538) #24	C1orf141 (ENSPPRG00000004147) #25	SLC35D1 (ENSPPRG00000003133) #26	MIER1 (ENSPPRG00000002692) #27	DNAI4 (ENSPPRG00000022534) #28	DYNLT5 (ENSPPRG00000019016) #29	SGIP1 (ENSPPRG00000017177) #30	PDE4B (ENSPPRG00000011824) #31	LEPR (ENSPPRG00000006910) #32	LEPROT (ENSPPRG00000002176) #33	DNAJC6 (ENSPPRG00000002001) #34	ENSPPRG00000000962 #35	ENSPPRG00000000367 #36	JAK1 (ENSPPRG00000022662) #37
lion	MODERN SPECIES	8	LRRIQ3 (ENSPLOG00000009451)	ENSPLOG00000009529	NEGR1 (ENSPLOG00000009541) #8	ZRANB2 (ENSPLOG00000009609) #9	PTGER3 (ENSPLOG00000009711) #10	CTH (ENSPLOG00000009821) #11	ANKRD13C (ENSPLOG00000009877) #12	SRSF11 (ENSPLOG00000009962) #13	LRRC40 (ENSPLOG00000010064) #14	LRRC7 (ENSPLOG00000010287) #16	DEPDC1 (ENSPLOG00000010722) #17	RPE65 (ENSPLOG00000010779) #18	WLS (ENSPLOG00000011018) #19	GNG12 (ENSPLOG00000011515) #20	GADD45A (ENSPLOG00000011555) #21	SERBP1 (ENSPLOG00000011662) #22	IL12RB2 (ENSPLOG00000011722) #23	IL23R (ENSPLOG00000011807) #24	C1orf141 (ENSPLOG00000011956) #25	SLC35D1 (ENSPLOG00000012137) #26	MIER1 (ENSPLOG00000012250) #27	DNAI4 (ENSPLOG00000012806) #28	DYNLT5 (ENSPLOG00000012982) #29	SGIP1 (ENSPLOG00000013099) #30	PDE4B (ENSPLOG00000006308) #31	LEPR (ENSPLOG00000006675) #32	DNAJC6 (ENSPLOG00000006842) #34	ENSPLOG00000007140 #35	ENSPLOG00000007171 #36	JAK1 (ENSPLOG00000007282) #37	RAVER2 (ENSPLOG00000007347)
Tiger	MODERN SPECIES	311	ENSPTIG00000006252 #7	ENSPTIG00000015221	NEGR1 (ENSPTIG00000015387) #8	ZRANB2 (ENSPTIG00000017134) #9	CTH (ENSPTIG00000019906) #11	ANKRD13C (ENSPTIG00000005530) #12	SRSF11 (ENSPTIG00000008536) #13	LRRC40 (ENSPTIG00000010337) #14	ENSPTIG00000011749 #15	ENSPTIG00000012986 #16	DEPDC1 (ENSPTIG00000014898) #17	RPE65 (ENSPTIG00000016708) #18	WLS (ENSPTIG00000017665) #19	GNG12 (ENSPTIG00000000039) #20	GADD45A (ENSPTIG00000002992) #21	SERBP1 (ENSPTIG00000005938) #22	IL12RB2 (ENSPTIG00000007381) #23	IL23R (ENSPTIG00000013297) #24	C1orf141 (ENSPTIG00000014969) #25	SLC35D1 (ENSPTIG00000016895) #26	MIER1 (ENSPTIG00000017971) #27	DNAI4 (ENSPTIG00000012909) #28	DYNLT5 (ENSPTIG00000015008) #29	SGIP1 (ENSPTIG00000016312) #30	PDE4B (ENSPTIG00000007272) #31	LEPR (ENSPTIG00000015515) #32	LEPROT (ENSPTIG00000017653) #33	DNAJC6 (ENSPTIG00000018599) #34	ENSPTIG00000021852 #35	JAK1 (ENSPTIG00000003605) #37	RAVER2 (ENSPTIG00000009389)
Cat	MODERN SPECIES	239	ENSFCAG00000027931	NEGR1 (ENSFCAG00000033201) #8	ENSFCAG00000052553	ZRANB2 (ENSFCAG00000028246) #9	PTGER3 (ENSFCAG00000006185) #10	CTH (ENSFCAG00000012450) #11	ANKRD13C (ENSFCAG00000012449) #12	SRSF11 (ENSFCAG00000012448) #13	LRRC40 (ENSFCAG00000026681) #14	LRRC7 (ENSFCAG00000023714) #16	DEPDC1 (ENSFCAG00000012566) #17	RPE65 (ENSFCAG00000012565) #18	WLS (ENSFCAG00000012564) #19	GNG12 (ENSFCAG00000045903) #20	GADD45A (ENSFCAG00000002987) #21	SERBP1 (ENSFCAG00000000606) #22	IL12RB2 (ENSFCAG00000001940) #23	IL23R (ENSFCAG00000001939) #24	CC1H1orf141 (ENSFCAG00000044655) #25	SLC35D1 (ENSFCAG00000005509) #26	MIER1 (ENSFCAG00000028898) #27	DNAI4 (ENSFCAG00000023522) #28	DYNLT5 (ENSFCAG00000038222) #29	SGIP1 (ENSFCAG00000011575) #30	PDE4B (ENSFCAG00000030002) #31	LEPR (ENSFCAG00000011703) #32	DNAJC6 (ENSFCAG00000008367) #34	AK4 (ENSFCAG00000033540) #35	JAK1 (ENSFCAG00000001953) #37	RAVER2 (ENSFCAG00000022781)	CACHD1 (ENSFCAG00000010902)
Caniformia	ANCESTRAL SPECIES	2	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36
Canidae	ANCESTRAL SPECIES	11															ENSGT00390000018665.m.b	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000161274	ENSGT00390000017379	ENSGT00390000011596.a	ENSGT00940000153653.a.b.a.b	ENSGT00390000009864	ENSGT00390000004368	ENSGT00940000155286	ENSGT00390000013910	ENSGT00940000156623	ENSGT00940000158171	ENSGT00390000006617	ENSGT00390000014840.a	ENSGT00940000160875	ENSGT01030000234586.A.a.b	ENSGT00390000018665.m.b	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00950000183030.m.a.b.a.b
Dingo	MODERN SPECIES	373	COPS3 (ENSCAFG00020020887)	FLCN (ENSCAFG00020020885)	PLD6 (ENSCAFG00020020882)	ENSCAFG00020020848	ENSCAFG00020020839	USP22 (ENSCAFG00020020826)	DHRS7B (ENSCAFG00020020817)	TMEM11 (ENSCAFG00020020810)	NATD1 (ENSCAFG00020020807)	MAP2K3 (ENSCAFG00020020804)	ENSCAFG00020020791	ENSCAFG00020020789	ENSCAFG00020020774	ENSCAFG00020020768	ENSCAFG00020020759	SERBP1 (ENSCAFG00020020723) #22	IL12RB2 (ENSCAFG00020020634) #23	IL23R (ENSCAFG00020020599) #24	C1orf141 (ENSCAFG00020020595) #25	SLC35D1 (ENSCAFG00020020579) #26	MIER1 (ENSCAFG00020020562) #27	DNAI4 (ENSCAFG00020020542) #28	DYNLT5 (ENSCAFG00020020540) #29	SGIP1 (ENSCAFG00020020476) #30	PDE4B (ENSCAFG00020020440) #31	ENSCAFG00020020435	ENSCAFG00020020432	LEPR (ENSCAFG00020020425) #32	LEPROT (ENSCAFG00020020424) #33	DNAJC6 (ENSCAFG00020020422) #34	ENSCAFG00020020420 #35
Dog	MODERN SPECIES	33	FLCN (ENSCAFG00845024691)	PLD6 (ENSCAFG00845024817)	MPRIP (ENSCAFG00845024946)	TNFRSF13B (ENSCAFG00845025488)	ENSCAFG00845025581	ENSCAFG00845025849	TMEM11 (ENSCAFG00845026180)	NATD1 (ENSCAFG00845026261)	MAP2K3 (ENSCAFG00845026332)	KCNJ12 (ENSCAFG00845026512)	ENSCAFG00845026571	ENSCAFG00845026623	ENSCAFG00845026663	ENSCAFG00845026706	ENSCAFG00845026757	SERBP1 (ENSCAFG00845026795) #22	IL12RB2 (ENSCAFG00845026911) #23	IL23R (ENSCAFG00845027041) #24	C1orf141 (ENSCAFG00845027193) #25	SLC35D1 (ENSCAFG00845027306) #26	MIER1 (ENSCAFG00845027592) #27	ENSCAFG00845027883	DNAI4 (ENSCAFG00845027932) #28	TCTEX1D1 (ENSCAFG00845028056) #29	SGIP1 (ENSCAFG00845028227) #30	PDE4B (ENSCAFG00845028786) #31	ENSCAFG00845029063	LEPR (ENSCAFG00845029124) #32	LEPROT (ENSCAFG00845029345) #33	DNAJC6 (ENSCAFG00845029438) #34	AK4 (ENSCAFG00845029543) #35
Red fox	MODERN SPECIES	179												ENSVVUG00000015611	ENSVVUG00000015607	ENSVVUG00000015604	ENSVVUG00000015599	SERBP1 (ENSVVUG00000015590) #22	IL12RB2 (ENSVVUG00000015579) #23	IL23R (ENSVVUG00000015557) #24	SLC35D1 (ENSVVUG00000015506) #26	MIER1 (ENSVVUG00000015467) #27	DNAI4 (ENSVVUG00000015443) #28	DYNLT5 (ENSVVUG00000015438) #29	SGIP1 (ENSVVUG00000015413) #30	PDE4B (ENSVVUG00000015400) #31	ENSVVUG00000015396 #31	ENSVVUG00000015390	LEPR (ENSVVUG00000014079) #32	LEPROT (ENSVVUG00000014028) #33	DNAJC6 (ENSVVUG00000014008) #34	AK4 (ENSVVUG00000014004) #35	ENSVVUG00000014003 #35
Caniformia_b	ANCESTRAL SPECIES	1	ENSGT00940000159289 #8	ENSGT00940000154612.m.b.d	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36
Mustelinae	ANCESTRAL SPECIES	39	ENSGT00940000159289 #8	ENSGT00940000154612.m.b.d	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
American mink	MODERN SPECIES	57										DEPDC1 (ENSNVIG00000011335) #17	RPE65 (ENSNVIG00000011309) #18	WLS (ENSNVIG00000011264) #19	DIRAS3 (ENSNVIG00000011249)	GBG12 (ENSNVIG00000011236) #20	GADD45A (ENSNVIG00000011189) #21	SERBP1 (ENSNVIG00000011142) #22	IL12RB2 (ENSNVIG00000011029) #23	IL23R (ENSNVIG00000010999) #24	ENSNVIG00000010983 #25	SLC35D1 (ENSNVIG00000010971) #26	MIER1 (ENSNVIG00000010880) #27	DNAI4 (ENSNVIG00000010851) #28	DYNLT5 (ENSNVIG00000010848) #29	SGIP1 (ENSNVIG00000010770) #30	PDE4B (ENSNVIG00000010683) #31	LEPR (ENSNVIG00000010636) #32	LEPROT (ENSNVIG00000010602) #33	AUXI (ENSNVIG00000010505) #34	ENSNVIG00000010479 #35	JAK1 (ENSNVIG00000010400) #37	RAVER2 (ENSNVIG00000010354)
Ferret	MODERN SPECIES	254	ZRANB2 (ENSMPUG00000000917) #9	PTGER3 (ENSMPUG00000000913) #10	ENSMPUG00000018477	ENSMPUG00000000901	CTH (ENSMPUG00000000898) #11	ANKRD13C (ENSMPUG00000000895) #12	SRSF11 (ENSMPUG00000000892) #13	LRRC40 (ENSMPUG00000000890) #14	LRRC7 (ENSMPUG00000000888) #16	DEPDC1 (ENSMPUG00000000887) #17	RPE65 (ENSMPUG00000000810) #18	WLS (ENSMPUG00000000807) #19	ENSMPUG00000000803	ENSMPUG00000000800	GADD45A (ENSMPUG00000000798) #21	SERBP1 (ENSMPUG00000000797) #22	IL12RB2 (ENSMPUG00000000794) #23	ENSMPUG00000000792	IL23R (ENSMPUG00000000781) #24	C1orf141 (ENSMPUG00000000780) #25	SLC35D1 (ENSMPUG00000000778) #26	MIER1 (ENSMPUG00000000774) #27	DNAI4 (ENSMPUG00000000772) #28	DYNLT5 (ENSMPUG00000000770) #29	SGIP1 (ENSMPUG00000000764) #30	PDE4B (ENSMPUG00000000760) #31	ENSMPUG00000000757 #31	ENSMPUG00000000756	LEPR (ENSMPUG00000000734) #32	LEPROT (ENSMPUG00000000726) #33	DNAJC6 (ENSMPUG00000000723) #34
Ursidae	DUPLICATION
Ursidae	ANCESTRAL SPECIES																	ENSGT00520000055591.a.lb #22
Giant Panda	MODERN SPECIES	2279																ENSAMEG00000026460 #22
Ursidae	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00940000154612.m.b.d	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B.b #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.mb #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT01030000238341 #36
Ursus	ANCESTRAL SPECIES	18	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00940000154612.m.b.d	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B.b #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.mb #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
American black bear	MODERN SPECIES	4452																SERBP1 (ENSUAMG00000021299) #22	IL12RB2 (ENSUAMG00000021336) #23
Polar bear	MODERN SPECIES	170	NEGR1 (ENSUMAG00000006553) #8	ENSUMAG00000006557	ZRANB2 (ENSUMAG00000006559) #9	PTGER3 (ENSUMAG00000006569) #10	ENSUMAG00000006594	CTH (ENSUMAG00000006601) #11	ANKRD13C (ENSUMAG00000006610) #12	SRSF11 (ENSUMAG00000006618) #13	LRRC40 (ENSUMAG00000006621) #14	LRRC7 (ENSUMAG00000006650) #16	DEPDC1 (ENSUMAG00000006778) #17	RPE65 (ENSUMAG00000006787) #18	WLS (ENSUMAG00000006798) #19	GNG12 (ENSUMAG00000006831) #20	GADD45A (ENSUMAG00000006834) #21	SERBP1 (ENSUMAG00000006841) #22	IL12RB2 (ENSUMAG00000006846) #23	IL23R (ENSUMAG00000006850) #24	C1orf141 (ENSUMAG00000006856) #25	SLC35D1 (ENSUMAG00000006858) #26	MIER1 (ENSUMAG00000006869) #27	DNAI4 (ENSUMAG00000006884) #28	DYNLT5 (ENSUMAG00000006901) #29	SGIP1 (ENSUMAG00000006920) #30	PDE4B (ENSUMAG00000007042) #31	ENSUMAG00000007396	LEPR (ENSUMAG00000007490) #32	LEPROT (ENSUMAG00000008414) #33	DNAJC6 (ENSUMAG00000008423) #34	ENSUMAG00000008451 #35	JAK1 (ENSUMAG00000008476) #37
Giant Panda	MODERN SPECIES	11	FPGT (ENSAMEG00000027489)	LRRIQ3 (ENSAMEG00000031314)	NEGR1 (ENSAMEG00000012764) #8	ZRANB2 (ENSAMEG00000003845) #9	PTGER3 (ENSAMEG00000003871) #10	CTH (ENSAMEG00000000028) #11	ANKRD13C (ENSAMEG00000000027) #12	SRSF11 (ENSAMEG00000024726) #13	LRRC40 (ENSAMEG00000011362) #14	LRRC7 (ENSAMEG00000011407) #16	DEPDC1 (ENSAMEG00000000402) #17	RPE65 (ENSAMEG00000000442) #18	WLS (ENSAMEG00000004493) #19	GNG12 (ENSAMEG00000004527) #20	GADD45A (ENSAMEG00000004529) #21	SERBP1 (ENSAMEG00000004536) #22	IL12RB2 (ENSAMEG00000004570) #23	IL23R (ENSAMEG00000004611) #24	C1orf141 (ENSAMEG00000004616) #25	SLC35D1 (ENSAMEG00000004626) #26	MIER1 (ENSAMEG00000004657) #27	DNAI4 (ENSAMEG00000004681) #28	DYNLT5 (ENSAMEG00000004714) #29	SGIP1 (ENSAMEG00000004727) #30	PDE4B (ENSAMEG00000018054) #31	LEPR (ENSAMEG00000018031) #32	LEPROT (ENSAMEG00000025091) #33	DNAJC6 (ENSAMEG00000014950) #34	AK4 (ENSAMEG00000030587) #35	ENSAMEG00000020190 #36	JAK1 (ENSAMEG00000014980) #37
Laurasiatheria_c	ANCESTRAL SPECIES		ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Chiroptera	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	27	NEGR1 (ENSRFEG00010005020) #8	ZRANB2 (ENSRFEG00010005004) #9	ENSRFEG00010004991 #10	ENSRFEG00010004976 #11	ENSRFEG00010004954 #12	SRSF11 (ENSRFEG00010004928) #13	LRRC40 (ENSRFEG00010004902) #14	LRRC7 (ENSRFEG00010004869) #16	ENSRFEG00010004831	ENSRFEG00010004819	DEPDC1 (ENSRFEG00010004806) #17	RPE65 (ENSRFEG00010004778) #18	WLS (ENSRFEG00010004748) #19	DIRAS3 (ENSRFEG00010004732)	GADD45A (ENSRFEG00010004705) #21	ENSRFEG00010004678 #22	IL12RB2 (ENSRFEG00010004653) #23	IL23R (ENSRFEG00010004610) #24	C1orf141 (ENSRFEG00010004583) #25	SLC35D1 (ENSRFEG00010004543) #26	MIER1 (ENSRFEG00010004493) #27	DNAI4 (ENSRFEG00010004457) #28	INSL5 (ENSRFEG00010004442)	DYNLT5 (ENSRFEG00010004431) #29	SGIP1 (ENSRFEG00010004327) #30	ENSRFEG00010004239	PDE4B (ENSRFEG00010004177) #31	LEPR (ENSRFEG00010004114) #32	LEPROT (ENSRFEG00010004090) #33	DNAJC6 (ENSRFEG00010003981) #34	ENSRFEG00010003929 #35
Greater horseshoe bat	MODERN SPECIES	17	VPS26B (ENSRFEG00010015072)	NCAPD3 (ENSRFEG00010014962)	JAM3 (ENSRFEG00010014863)	IGSF9B (ENSRFEG00010014759)	SPATA19 (ENSRFEG00010014631)	OPCML (ENSRFEG00010014281)	ENSRFEG00010014206	NTM (ENSRFEG00010013634)	SNX19 (ENSRFEG00010013391)	ADAMTS15 (ENSRFEG00010013340)	ENSRFEG00010013185	ZBTB44 (ENSRFEG00010013131)	ST14 (ENSRFEG00010013032)	ENSRFEG00010012982	APLP2 (ENSRFEG00010012749)	ENSRFEG00010012622 #22	PRDM10 (ENSRFEG00010011775)	NFRKB (ENSRFEG00010011677)	TMEM45B (ENSRFEG00010011612)	ENSRFEG00010011584	BARX2 (ENSRFEG00010011522)	ARHGAP32 (ENSRFEG00010011158)	KCNJ5 (ENSRFEG00010011096)	KCNJ1 (ENSRFEG00010011037)	FLI1 (ENSRFEG00010010862)	ETS1 (ENSRFEG00010010620)	ENSRFEG00010010555	ENSRFEG00010010506	KIRREL3 (ENSRFEG00010010202)	ST3GAL4 (ENSRFEG00010009892)	DCPS (ENSRFEG00010009838)
Microbat	MODERN SPECIES	1000													ENSMLUG00000012569	GNG12 (ENSMLUG00000010812) #20	GADD45A (ENSMLUG00000004708) #21	SERBP1 (ENSMLUG00000001424) #22	IL12RB2 (ENSMLUG00000001412) #23	IL23R (ENSMLUG00000017295) #24	ENSMLUG00000024118 #25	SLC35D1 (ENSMLUG00000000562) #26	MIER1 (ENSMLUG00000000552) #27	DNAI4 (ENSMLUG00000000536) #28	DYNLT5 (ENSMLUG00000000528) #29	SGIP1 (ENSMLUG00000000516) #30	ENSMLUG00000027559	PDE4B (ENSMLUG00000009026) #31	ENSMLUG00000028998	LEPR (ENSMLUG00000016208) #32	LEPROT (ENSMLUG00000028850) #33	DNAJC6 (ENSMLUG00000009642) #34	ENSMLUG00000009622 #35
Megabat	MODERN SPECIES	3474																SERBP1 (ENSPVAG00000004054) #22	IL12RB2 (ENSPVAG00000004052) #23
Equus	ANCESTRAL SPECIES	3	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Donkey	MODERN SPECIES	7	NEGR1 (ENSEASG00005007828) #8	ZRANB2 (ENSEASG00005007831) #9	PTGER3 (ENSEASG00005007839) #10	CTH (ENSEASG00005007840) #11	ANKRD13C (ENSEASG00005007844) #12	SRSF11 (ENSEASG00005007847) #13	LRRC40 (ENSEASG00005007850) #14	ENSEASG00005007851 #15	ENSEASG00005007856 #16	DEPDC1 (ENSEASG00005007861) #17	RPE65 (ENSEASG00005007863) #18	WLS (ENSEASG00005007867) #19	DIRAS3 (ENSEASG00005038197)	GNG12 (ENSEASG00005007872) #20	GADD45A (ENSEASG00005024228) #21	SERBP1 (ENSEASG00005007881) #22	IL12RB2 (ENSEASG00005007885) #23	IL23R (ENSEASG00005007895) #24	C1orf141 (ENSEASG00005007907) #25	SLC35D1 (ENSEASG00005028888) #26	MIER1 (ENSEASG00005007916) #27	DNAI4 (ENSEASG00005007939) #28	INSL5 (ENSEASG00005024533)	DYNLT5 (ENSEASG00005037593) #29	SGIP1 (ENSEASG00005007954) #30	PDE4B (ENSEASG00005007980) #31	ENSEASG00005026002 #31	LEPR (ENSEASG00005008026) #32	LEPROT (ENSEASG00005037559) #33	DNAJC6 (ENSEASG00005008132) #34	ENSEASG00005008138 #35
Horse	MODERN SPECIES	26	FPGT (ENSECAG00000039694)	LRRIQ3 (ENSECAG00000035457)	NEGR1 (ENSECAG00000014027) #8	ZRANB2 (ENSECAG00000014173) #9	PTGER3 (ENSECAG00000014239) #10	CTH (ENSECAG00000015050) #11	ANKRD13C (ENSECAG00000016794) #12	SRSF11 (ENSECAG00000017756) #13	LRRC40 (ENSECAG00000019554) #14	LRRC7 (ENSECAG00000006937) #16	DEPDC1 (ENSECAG00000008461) #17	RPE65 (ENSECAG00000010170) #18	WLS (ENSECAG00000012045) #19	DIRAS3 (ENSECAG00000030001)	GADD45A (ENSECAG00000040631) #21	SERBP1 (ENSECAG00000014617) #22	IL12RB2 (ENSECAG00000016537) #23	IL23R (ENSECAG00000017239) #24	C5H1orf141 (ENSECAG00000019495) #25	SLC35D1 (ENSECAG00000019542) ##26	MIER1 (ENSECAG00000020475) #27	DNAI4 (ENSECAG00000023875) #28	SGIP1 (ENSECAG00000000852) #30	PDE4B (ENSECAG00000011003) #31	LEPR (ENSECAG00000013863) #32	LEPROT (ENSECAG00000016346) #33	DNAJC6 (ENSECAG00000016430) #34	AK4 (ENSECAG00000018332) #35	JAK1 (ENSECAG00000018673) #37	RAVER2 (ENSECAG00000022014)	CACHD1 (ENSECAG00000022152)
Artiodactyla	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Suina	ANCESTRAL SPECIES	27	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Pig	MODERN SPECIES	14	ENSSSCG00000049727	ZRANB2 (ENSSSCG00000003787) #9	PTGER3 (ENSSSCG00000003788) #10	CTH (ENSSSCG00000003789) #11	ANKRD13C (ENSSSCG00000003790) #12	SRSF11 (ENSSSCG00000003791) #13	ENSSSCG00000003792 #14	LRRC7 (ENSSSCG00000003793) #16	ENSSSCG00000042518	DEPDC1 (ENSSSCG00000033443) #17	RPE65 (ENSSSCG00000003794) #18	WLS (ENSSSCG00000003795) #19	DIRAS3 (ENSSSCG00000003797)	GNG12 (ENSSSCG00000036505) #20	GADD45A (ENSSSCG00000037066) #21	SERBP1 (ENSSSCG00000003798) #22	IL12RB2 (ENSSSCG00000003799) #23	IL23R (ENSSSCG00000003801) #24	C1orf141 (ENSSSCG00000003803) #25	SLC35D1 (ENSSSCG00000032043) #26	MIER1 (ENSSSCG00000030423) #27	DNAI4 (ENSSSCG00000022305) #28	ENSSSCG00000039433	DYNLT5 (ENSSSCG00000031352) #29	SGIP1 (ENSSSCG00000025243) #30	PDE4B (ENSSSCG00000003805) #31	ENSSSCG00000040903	LEPR (ENSSSCG00000025188) #32	LEPROT (ENSSSCG00000003806) #33	DNAJC6 (ENSSSCG00000003807) #34	ENSSSCG00000040337 #35
Chacoan peccary	MODERN SPECIES	54	ZRANB2 (ENSCWAG00000006781) #9	PTGER3 (ENSCWAG00000006818) #10	ENSCWAG00000006917	CTH (ENSCWAG00000006977) #11	ENSCWAG00000007276	ANKRD13C (ENSCWAG00000007305) #12	SRSF11 (ENSCWAG00000007484) #13	LRRC40 (ENSCWAG00000007563) #14	LRRC7 (ENSCWAG00000007628) #16	DEPDC1 (ENSCWAG00000008223) #17	RPE65 (ENSCWAG00000005759) #18	WLS (ENSCWAG00000005902) #19	DIRAS3 (ENSCWAG00000006110)	GNG12 (ENSCWAG00000006121) #20	GADD45A (ENSCWAG00000006162) #21	SERBP1 (ENSCWAG00000006245) #22	IL12RB2 (ENSCWAG00000006311) #23	IL23R (ENSCWAG00000006836) #24	ENSCWAG00000006960 #25	SLC35D1 (ENSCWAG00000006999) #26	MIER1 (ENSCWAG00000007093) #27	ENSCWAG00000007755	ENSCWAG00000007769 #28	INSL5 (ENSCWAG00000007785)	DYNLT5 (ENSCWAG00000007809) #29	SGIP1 (ENSCWAG00000007878) #30	PDE4B (ENSCWAG00000008615) #31	LEPR (ENSCWAG00000009654) #32	LEPROT (ENSCWAG00000009749) #33	DNAJC6 (ENSCWAG00000009899) #34	ENSCWAG00000010175 #35
Artiodactyla_a	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Camelidae	ANCESTRAL SPECIES	11	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00990000205383	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Arabian camel	MODERN SPECIES	4	ENSCDRG00005009889	NEGR1 (ENSCDRG00005009715) #8	ZRANB2 (ENSCDRG00005009506) #9	PTGER3 (ENSCDRG00005009342) #10	CTH (ENSCDRG00005009028) #11	ANKRD13C (ENSCDRG00005008826) #12	SRSF11 (ENSCDRG00005008759) #13	LRRC40 (ENSCDRG00005008600) #14	LRRC7 (ENSCDRG00005008143) #16	DEPDC1 (ENSCDRG00005008010) #17	RPE65 (ENSCDRG00005007822) #18	WLS (ENSCDRG00005007433) #19	DIRAS3 (ENSCDRG00005007399)	GNG12 (ENSCDRG00005007385) #20	GADD45A (ENSCDRG00005007265) #21	SERBP1 (ENSCDRG00005007209) #22	IL12RB2 (ENSCDRG00005006997) #23	IL23R (ENSCDRG00005006826) #24	ENSCDRG00005006792	SLC35D1 (ENSCDRG00005006715) #26	MIER1 (ENSCDRG00005006406) #27	DNAI4 (ENSCDRG00005006212) #28	INSL5 (ENSCDRG00005006189)	DYNLT5 (ENSCDRG00005006169) #29	SGIP1 (ENSCDRG00005005920) #30	PDE4B (ENSCDRG00005005526) #31	ENSCDRG00005005483	LEPR (ENSCDRG00005005388) #32	LEPROT (ENSCDRG00005005302) #33	DNAJC6 (ENSCDRG00005004711) #34	ENSCDRG00005004652 #35
Alpaca	MODERN SPECIES	50																SERBP1 (ENSVPAG00000000923) #22	IL12RB2 (ENSVPAG00000000922) #23	IL23R (ENSVPAG00000000921) #24	ENSVPAG00000000920	SLC35D1 (ENSVPAG00000000919) #26	MIER1 (ENSVPAG00000000918) #27	DNAI4 (ENSVPAG00000000917) #28	INSL5 (ENSVPAG00000000916)	DYNLT5 (ENSVPAG00000000915) #29	SGIP1 (ENSVPAG00000000914) #30
Artiodactyla_b	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Pecora	ANCESTRAL SPECIES	2	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Percora_a	ANCESTRAL SPECIES	1	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Bovidae	ANCESTRAL SPECIES	1	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Bovinae	ANCESTRAL SPECIES	1	ENSGT00940000159289 #8	ENSGT01100000264350	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b.e #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198.c #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Bos	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312.u #11	ENSGT00950000182928.B.d.b #12	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00940000161805.p.a.b	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b.e #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198.c #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568.u #35
Bos_a	ANCESTRAL SPECIES	1	ENSGT00950000182928.B.d.b #12	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00940000161805.p.a.b	ENSGT00940000165941	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b.e #20	ENSGT00940000164094	ENSGT00390000001618.cb.b	ENSGT00390000000378.d.b.fb.b.c.h	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198.c #24	ENSGT00530000064198.d #24	ENSGT00390000014549.g	ENSGT00990000205383	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00390000017491.t.t.a.b	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33
Domestic yak	MODERN SPECIES	22	ANKRD13C (ENSBGRG00000005513) #12	ENSBGRG00000007232	SRSF11 (ENSBGRG00000007267) #13	LRRC40 (ENSBGRG00000007429) #14	LRRC7 (ENSBGRG00000007643) #16	ENSBGRG00000008029	DEPDC1 (ENSBGRG00000008047) #17	ENSBGRG00000008289	RPE65 (ENSBGRG00000008339) #18	WLS (ENSBGRG00000008504) #19	DIRAS3 (ENSBGRG00000008874)	ENSBGRG00000008894	ENSBGRG00000008913 #20	ENSBGRG00000008938	GADD45A (ENSBGRG00000008972) #21	SERBP1 (ENSBGRG00000009099) #22	IL12RB2 (ENSBGRG00000009248) #23	ENSBGRG00000009394	ENSBGRG00000009413 #24	ENSBGRG00000009440 #24	ENSBGRG00000009539	ENSBGRG00000009599	SLC35D1 (ENSBGRG00000009631) #26	MIER1 (ENSBGRG00000009812) #27	ENSBGRG00000010112	DNAI4 (ENSBGRG00000010128) #28	INSL5 (ENSBGRG00000010455)	DYNLT5 (ENSBGRG00000010507) #29	SGIP1 (ENSBGRG00000010617) #30	ENSBGRG00000011976	ENSBGRG00000012022
Wild yak	MODERN SPECIES	754											WLS (ENSBMUG00000010330) #19	GNG12 (ENSBMUG00000010353) #20	ENSBMUG00000010359	ENSBMUG00000010367	GADD45A (ENSBMUG00000010401) #21	SERBP1 (ENSBMUG00000010422) #22	IL12RB2 (ENSBMUG00000010519) #23	ENSBMUG00000010553 #24	ENSBMUG00000010567 #24	ENSBMUG00000010583	ENSBMUG00000010602	ENSBMUG00000010632	SLC35D1 (ENSBMUG00000010661) #26	MIER1 (ENSBMUG00000010808) #27	ENSBMUG00000010837 #28	ENSBMUG00000010843	ENSBMUG00000010869 #28	INSL5 (ENSBMUG00000010885)	DYNLT5 (ENSBMUG00000010909) #29	SGIP1 (ENSBMUG00000011032) #30	ENSBMUG00000011048
Bos_b	ANCESTRAL SPECIES	1	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312.u #11	ENSGT00950000182928.B.d.b #12	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.b	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00940000161805.p.a.b	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b.e #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198.c #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00400000022103.a.jb.a	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.i.a #33	ENSGT00940000158755 #34
Hybrid Bos Indicus	MODERN SPECIES	22	ENSBIXG00005024494 #10	CTH (ENSBIXG00005024430) #11	ENSBIXG00005006847	ANKRD13C (ENSBIXG00005004155) #12	ENSBIXG00005006287	SRSF11 (ENSBIXG00005007179) #13	LRRC40 (ENSBIXG00005024169) #14	LRRC7 (ENSBIXG00005024014) #16	ENSBIXG00005006675	DEPDC1 (ENSBIXG00005023771) #17	ENSBIXG00005023720	RPE65 (ENSBIXG00005023709) #18	WLS (ENSBIXG00005023640) #19	DIRAS3 (ENSBIXG00005023520)	GADD45A (ENSBIXG00005023475) #21	SERBP1 (ENSBIXG00005023375) #22	IL12RB2 (ENSBIXG00005023295) #23	ENSBIXG00005023212 #25	IL23R (ENSBIXG00005023197) #24	SLC35D1 (ENSBIXG00005023139) #26	MIER1 (ENSBIXG00005003930) #27	DNAI4 (ENSBIXG00005022849) #28	ENSBIXG00005022763	INSL5 (ENSBIXG00005022735)	DYNLT5 (ENSBIXG00005003891) #29	SGIP1 (ENSBIXG00005022689) #30	ENSBIXG00005022613	PDE4B (ENSBIXG00005022555) #31	LEPR (ENSBIXG00005006516) #32	ENSBIXG00005005878 #33	DNAJC6 (ENSBIXG00005022150) #34
Cow	MODERN SPECIES	22	ENSBTAG00000005099	ZRANB2 (ENSBTAG00000002627) #9	PTGER3 (ENSBTAG00000019230) #10	CTH (ENSBTAG00000014791) #11	ANKRD13C (ENSBTAG00000015482) #12	SRSF11 (ENSBTAG00000015474) #13	LRRC40 (ENSBTAG00000008243) #14	LRRC7 (ENSBTAG00000009338) #16	DEPDC1 (ENSBTAG00000001343) #17	ENSBTAG00000030890	RPE65 (ENSBTAG00000020494) #18	WLS (ENSBTAG00000012976) #19	DIRAS3 (ENSBTAG00000012182)	GNG12 (ENSBTAG00000054533) #20	GADD45A (ENSBTAG00000013860) #21	SERBP1 (ENSBTAG00000012957) #22	IL12RB2 (ENSBTAG00000009455) #23	IL23R (ENSBTAG00000014983) #24	C3H1orf141 (ENSBTAG00000030809) #25	SLC35D1 (ENSBTAG00000005445) #26	MIER1 (ENSBTAG00000005443) #27	DNAI4 (ENSBTAG00000005442) #28	ENSBTAG00000049696	INSL5 (ENSBTAG00000003850)	DYNLT5 (ENSBTAG00000011097) #29	SGIP1 (ENSBTAG00000011091) #30	PDE4B (ENSBTAG00000008636) #31	MGC137454 (ENSBTAG00000030852)	LEPR (ENSBTAG00000005910) #32	LEPROT (ENSBTAG00000005909) #33	DNAJC6 (ENSBTAG00000030749) #34
American bison	MODERN SPECIES	3205														ENSBBBG00000001748 #20	GADD45A (ENSBBBG00000008738) #21	SERBP1 (ENSBBBG00000012876) #22	IL12RB2 (ENSBBBG00000012971) #23	ENSBBBG00000002584 #24	ENSBBBG00000013005 #24	ENSBBBG00000013013	SLC35D1 (ENSBBBG00000013026) #26	MIER1 (ENSBBBG00000002617) #27	ENSBBBG00000013078	DNAI4 (ENSBBBG00000013096) #28	INSL5 (ENSBBBG00000002632)	DYNLT5 (ENSBBBG00000001674) #29	ENSBBBG00000013111	SGIP1 (ENSBBBG00000002670) #30	PDE4B (ENSBBBG00000002710) #31	LEPR (ENSBBBG00000013462) #32	LEPROT (ENSBBBG00000013493) #33
Caprinae	ANCESTRAL SPECIES	2	ENSGT00940000159289 #8	ENSGT00730000111078.`b #9	ENSGT01030000234559.b #10	ENSGT00940000167970.b	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a.j #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Goat	MODERN SPECIES	22	ENSCHIG00000009410 #9	PTGER3 (ENSCHIG00000020559) #10	ENSCHIG00000026245	CTH (ENSCHIG00000019727) #11	ANKRD13C (ENSCHIG00000021359) #12	SRSF11 (ENSCHIG00000025295) #13	LRRC40 (ENSCHIG00000017526) #14	LRRC7 (ENSCHIG00000026785) #16	DEPDC1 (ENSCHIG00000010008) #17	RPE65 (ENSCHIG00000023075) #18	ENSCHIG00000008135	WLS (ENSCHIG00000015817) #19	GNG12 (ENSCHIG00000015506) #20	GADD45A (ENSCHIG00000025537) #21	ENSCHIG00000011544	SERBP1 (ENSCHIG00000026670) #22	IL12RB2 (ENSCHIG00000026777) #23	IL23R (ENSCHIG00000023744) #24	C1orf141 (ENSCHIG00000027076) #25	SLC35D1 (ENSCHIG00000026528) #26	MIER1 (ENSCHIG00000017898) #27	DNAI4 (ENSCHIG00000003835) #28	INSL5 (ENSCHIG00000016279)	DYNLT5 (ENSCHIG00000025637) #29	SGIP1 (ENSCHIG00000011387) #30	ENSCHIG00000026828	PDE4B (ENSCHIG00000007288) #31	ENSCHIG00000026640	LEPR (ENSCHIG00000023226) #32	LEPROT (ENSCHIG00000010872) #33	DNAJC6 (ENSCHIG00000027196) #34
Rambouillet Sheep	MODERN SPECIES		ENSOARG00020013817 #9	PTGER3 (ENSOARG00020013470) #10	ENSOARG00020013423	ENSOARG00020013381	CTH (ENSOARG00020013082) #11	ANKRD13C (ENSOARG00020012714) #12	SRSF11 (ENSOARG00020012616) #13	LRRC40 (ENSOARG00020012472) #14	LRRC7 (ENSOARG00020011350) #16	DEPDC1 (ENSOARG00020010867) #17	RPE65 (ENSOARG00020010689) #18	WLS (ENSOARG00020010326) #19	DIRAS3 (ENSOARG00020010267)	GNG12 (ENSOARG00020010213) #20	GADD45A (ENSOARG00020009930) #21	SERBP1 (ENSOARG00020009805) #22	IL12RB2 (ENSOARG00020009558) #23	IL23R (ENSOARG00020009278) #24	C1orf141 (ENSOARG00020009212) #25	SLC35D1 (ENSOARG00020009073) #26	MIER1 (ENSOARG00020008644) #27	DNAI4 (ENSOARG00020008367) #28	INSL5 (ENSOARG00020008319)	DYNLT5 (ENSOARG00020008255) #29	ENSOARG00020008215	SGIP1 (ENSOARG00020007630) #30	PDE4B (ENSOARG00020007182) #31	LEPR (ENSOARG00020006509) #32	LEPROT (ENSOARG00020026025) #33	DNAJC6 (ENSOARG00020025984) #34	ENSOARG00020025972 #35
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	127															CEBPD (ENSMMSG00000002300)	ENSMMSG00000002289 #22	SPIDR (ENSMMSG00000002218)	ENSMMSG00000002200	PRKDC (ENSMMSG00000002095)	MCM4 (ENSMMSG00000001854)	UBE2V2 (ENSMMSG00000001792)	CLXN (ENSMMSG00000001763)	SNAI2 (ENSMMSG00000001745)
Siberian musk deer	MODERN SPECIES	339	ZRANB2 (ENSMMSG00000013063) #9	PTGER3 (ENSMMSG00000013125) #10	CTH (ENSMMSG00000013275) #11	ENSMMSG00000013321	ANKRD13C (ENSMMSG00000004375) #12	SRSF11 (ENSMMSG00000004414) #13	LRRC40 (ENSMMSG00000004447) #14	LRRC7 (ENSMMSG00000004578) #16	DEPDC1 (ENSMMSG00000005154) #17	RPE65 (ENSMMSG00000005215) #18	ENSMMSG00000005268	WLS (ENSMMSG00000005308) #19	DIRAS3 (ENSMMSG00000005467)	GNG12 (ENSMMSG00000005481) #20	GADD45A (ENSMMSG00000005535) #21	ENSMMSG00000005637 #22	IL12RB2 (ENSMMSG00000005957) #23	IL23R (ENSMMSG00000006578) #24	ENSMMSG00000006661	SLC35D1 (ENSMMSG00000006681) #26	MIER1 (ENSMMSG00000006725) #27	DNAI4 (ENSMMSG00000006873) #28	INSL5 (ENSMMSG00000007080)	DYNLT5 (ENSMMSG00000007108) #29	SGIP1 (ENSMMSG00000007149) #30	ENSMMSG00000007256	PDE4B (ENSMMSG00000007306) #31	LEPR (ENSMMSG00000007649) #32	LEPROT (ENSMMSG00000007926) #33	ENSMMSG00000007989 #34	ENSMMSG00000008200 #35
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	12	ENSCHYG00000023662 #22	ENSCHYG00000023866 #23	ENSCHYG00000023995 #24	ENSCHYG00000024006 #24	ENSCHYG00000024039	ENSCHYG00000024060 #26	ENSCHYG00000024134 #27	ENSCHYG00000024521 #28	ENSCHYG00000024658	ENSCHYG00000024671 #29	ENSCHYG00000024702 #30	ENSCHYG00000024798 #31	ENSCHYG00000025006	ENSCHYG00000025023 #20	GADD45A (ENSCHYG00000025045) #21	ENSCHYG00000025061 #22	ENSCHYG00000025088 #23	ENSCHYG00000025152 #24	C1orf141 (ENSCHYG00000025159) #25	ENSCHYG00000025173 #26	ENSCHYG00000025223 #27	ENSCHYG00000025382 #28	ENSCHYG00000025570	ENSCHYG00000025582 #29	ENSCHYG00000025647 #30	ENSCHYG00000025882 #31	ENSCHYG00000025911	ENSCHYG00000025927	ENSCHYG00000025967 #32	ENSCHYG00000026022 #33	ENSCHYG00000026111 #34
Yarkand deer	MODERN SPECIES	12	PTGER3 (ENSCHYG00000021260) #10	ENSCHYG00000021352	CTH (ENSCHYG00000021378) #11	ANKRD13C (ENSCHYG00000021606) #12	ENSCHYG00000021795	SRSF11 (ENSCHYG00000021820) #13	LRRC40 (ENSCHYG00000021953) #14	LRRC7 (ENSCHYG00000022051) #16	DEPDC1 (ENSCHYG00000022371) #17	RPE65 (ENSCHYG00000022637) #18	ENSCHYG00000022731	WLS (ENSCHYG00000022810) #19	DIRAS3 (ENSCHYG00000023484)	ENSCHYG00000023503 #20	ENSCHYG00000023560 #21	ENSCHYG00000023662 #22	ENSCHYG00000023866 #23	ENSCHYG00000023995 #24	ENSCHYG00000024006 #24	ENSCHYG00000024039	ENSCHYG00000024060 #26	ENSCHYG00000024134 #27	ENSCHYG00000024521 #28	ENSCHYG00000024658	ENSCHYG00000024671 #29	ENSCHYG00000024702 #30	ENSCHYG00000024798 #31	ENSCHYG00000025006	ENSCHYG00000025023 #20	GADD45A (ENSCHYG00000025045) #21	ENSCHYG00000025061 #22
Cetacea	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000154169.A.l
Odontoceti	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT01030000235815	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a.k #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000154169.A.l
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	15	ENSPCTG00005020300	NEGR1 (ENSPCTG00005020328) #8	ZRANB2 (ENSPCTG00005020419) #9	PTGER3 (ENSPCTG00005020486) #10	CTH (ENSPCTG00005020597) #11	ANKRD13C (ENSPCTG00005020681) #12	SRSF11 (ENSPCTG00005009159) #13	LRRC40 (ENSPCTG00005009424) #14	LRRC7 (ENSPCTG00005010553) #16	DEPDC1 (ENSPCTG00005012486) #17	RPE65 (ENSPCTG00005013056) #18	WLS (ENSPCTG00005013653) #19	DIRAS3 (ENSPCTG00005014188)	GNG12 (ENSPCTG00005014267) #20	GADD45A (ENSPCTG00005014488) #21	SERBP1 (ENSPCTG00005014874) #22	IL12RB2 (ENSPCTG00005015758) #23	IL23R (ENSPCTG00005017307) #24	ENSPCTG00005017739	SLC35D1 (ENSPCTG00005017949) #26	MIER1 (ENSPCTG00005018555) #27	DNAI4 (ENSPCTG00005019453) #28	ENSPCTG00005019975	INSL5 (ENSPCTG00005020021)	TCTEX1D1 (ENSPCTG00005020131) #29	SGIP1 (ENSPCTG00005020468) #30	ENSPCTG00005020806	PDE4B (ENSPCTG00005021109) #31	LEPR (ENSPCTG00005022108) #32	LEPROT (ENSPCTG00005022488) #33	DNAJC6 (ENSPCTG00005022551) #34
Sperm whale	MODERN SPECIES	4	ENSPCTG00005009672	ENSPCTG00005009634	LMO7 (ENSPCTG00005008737)	UCHL3 (ENSPCTG00005008650)	COMMD6 (ENSPCTG00005008603)	TBC1D4 (ENSPCTG00005008106)	KLF12 (ENSPCTG00005008057)	ENSPCTG00005008037	KLF5 (ENSPCTG00005008002)	ENSPCTG00005007978	ENSPCTG00005007954	PIBF1 (ENSPCTG00005007892)	DIS3 (ENSPCTG00005007725)	BORA (ENSPCTG00005007642)	ENSPCTG00005007621	ENSPCTG00005007587 #22	DACH1 (ENSPCTG00005007043)	ENSPCTG00005006965	KLHL1 (ENSPCTG00005006854)	ENSPCTG00005006815	ENSPCTG00005006787	PCDH9 (ENSPCTG00005006709)	ENSPCTG00005006677	ENSPCTG00005006666	PCDH20 (ENSPCTG00005006653)	ENSPCTG00005006637	ENSPCTG00005006621	TDRD3 (ENSPCTG00005006554)	ENSPCTG00005006500	DIAPH3 (ENSPCTG00005006190)	ENSPCTG00005006120
Odontoceti_a	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT01030000235815	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a.k #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000154169.A.l
Dolphin	MODERN SPECIES	2801																SERBP1 (ENSTTRG00000003520) #22	IL12RB2 (ENSTTRG00000003519) #23
Odontoceti_b	ANCESTRAL SPECIES		ENSGT00950000182926.a.b	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT01030000235815	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00550000074844.f	ENSGT00730000111209 #32	ENSGT00390000006503.a.k #33	ENSGT00940000158755 #34	ENSGT00390000017639.b
Monodontidae	ANCESTRAL SPECIES		ENSGT00950000182926.a.b	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT01030000235815	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00550000074844.f	ENSGT00730000111209 #32	ENSGT00390000006503.a.k #33	ENSGT00940000158755 #34	ENSGT00390000017639.b
Narwhal	MODERN SPECIES	304	ZRANB2 (ENSMMNG00015004587) #9	PTGER3 (ENSMMNG00015004807) #10	ENSMMNG00015005022	ENSMMNG00015005137	CTH (ENSMMNG00015005464) #11	ANKRD13C (ENSMMNG00015006243) #12	SRSF11 (ENSMMNG00015006795) #13	LRRC40 (ENSMMNG00015007303) #14	LRRC7 (ENSMMNG00015008751) #16	DEPDC1 (ENSMMNG00015010717) #17	RPE65 (ENSMMNG00015011109) #18	WLS (ENSMMNG00015011864) #19	DIRAS3 (ENSMMNG00015012826)	GNG12 (ENSMMNG00015012942) #20	GADD45A (ENSMMNG00015013267) #21	SERBP1 (ENSMMNG00015013615) #22	IL12RB2 (ENSMMNG00015014038) #23	IL23R (ENSMMNG00015014588) #24	ENSMMNG00015015024	SLC35D1 (ENSMMNG00015015256) #26	MIER1 (ENSMMNG00015015671) #27	DNAI4 (ENSMMNG00015017222) #28	ENSMMNG00015018080	INSL5 (ENSMMNG00015018236)	DYNLT5 (ENSMMNG00015018432) #29	SGIP1 (ENSMMNG00015018941) #30	PDE4B (ENSMMNG00015020127) #31	ENSMMNG00015021196	LEPR (ENSMMNG00015021685) #32	ENSMMNG00015021954 #33	DNAJC6 (ENSMMNG00015022012) #34
Beluga whale	MODERN SPECIES	74	NEGR1 (ENSDLEG00000021457) #8	ZRANB2 (ENSDLEG00000021455) #9	PTGER3 (ENSDLEG00000021453) #10	CTH (ENSDLEG00000021449) #11	ANKRD13C (ENSDLEG00000021447) #12	SRSF11 (ENSDLEG00000021445) #13	ENSDLEG00000021443 #13	LRRC40 (ENSDLEG00000021441) #14	LRRC7 (ENSDLEG00000021431) #16	DEPDC1 (ENSDLEG00000021426) #17	RPE65 (ENSDLEG00000021421) #18	WLS (ENSDLEG00000021417) #19	DIRAS3 (ENSDLEG00000021415)	GNG12 (ENSDLEG00000021413) #20	GADD45A (ENSDLEG00000021410) #21	SERBP1 (ENSDLEG00000021405) #22	IL12RB2 (ENSDLEG00000021402) #23	IL23R (ENSDLEG00000021400) #24	C1orf141 (ENSDLEG00000021395) #25	SLC35D1 (ENSDLEG00000021393) #26	MIER1 (ENSDLEG00000021386) #27	ENSDLEG00000021383	DNAI4 (ENSDLEG00000021380) #28	ENSDLEG00000021377	TCTEX1D1 (ENSDLEG00000021374) #29	SGIP1 (ENSDLEG00000021360) #30	ENSDLEG00000021356	PDE4B (ENSDLEG00000021354) #31	LEPR (ENSDLEG00000021320) #32	ENSDLEG00000021312 #33	DNAJC6 (ENSDLEG00000021307) #34
Vaquita	MODERN SPECIES		NEGR1 (ENSPSNG00000001115) #8	ZRANB2 (ENSPSNG00000001069) #9	PTGER3 (ENSPSNG00000001032) #10	ENSPSNG00000001013	CTH (ENSPSNG00000000964) #11	ANKRD13C (ENSPSNG00000000907) #12	SRSF11 (ENSPSNG00000000868) #13	LRRC40 (ENSPSNG00000000830) #14	LRRC7 (ENSPSNG00000000776) #16	DEPDC1 (ENSPSNG00000000663) #17	RPE65 (ENSPSNG00000000590) #18	WLS (ENSPSNG00000000517) #19	DIRAS3 (ENSPSNG00000000480)	GNG12 (ENSPSNG00000000467) #20	GADD45A (ENSPSNG00000000436) #21	SERBP1 (ENSPSNG00000000393) #22	IL12RB2 (ENSPSNG00000000245) #23	IL23R (ENSPSNG00000000116) #24	ENSPSNG00000000087	SLC35D1 (ENSPSNG00000000078) #26	MIER1 (ENSPSNG00000000044) #27	ENSPSNG00000000018	DNAI4 (ENSPSNG00000003982) #28	INSL5 (ENSPSNG00000003955)	DYNLT5 (ENSPSNG00000003942) #29	SGIP1 (ENSPSNG00000003872) #30	ENSPSNG00000003826	PDE4B (ENSPSNG00000003736) #31	LEPR (ENSPSNG00000003546) #32	LEPROT (ENSPSNG00000003475) #33	DNAJC6 (ENSPSNG00000003393) #34
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES		NEGR1 (ENSBMSG00010005031) #8	ZRANB2 (ENSBMSG00010005010) #9	PTGER3 (ENSBMSG00010004995) #10	ENSBMSG00010004991	CTH (ENSBMSG00010004973) #11	ANKRD13C (ENSBMSG00010004950) #12	SRSF11 (ENSBMSG00010004935) #13	LRRC40 (ENSBMSG00010004930) #14	LRRC7 (ENSBMSG00010004781) #16	DEPDC1 (ENSBMSG00010004720) #17	RPE65 (ENSBMSG00010004694) #18	WLS (ENSBMSG00010004687) #19	ENSBMSG00010004680	GNG12 (ENSBMSG00010004664) #20	GADD45A (ENSBMSG00010004628) #21	ENSBMSG00010004579 #22	IL12RB2 (ENSBMSG00010004316) #23	IL23R (ENSBMSG00010004266) #24	ENSBMSG00010004253	SLC35D1 (ENSBMSG00010004244) #26	MIER1 (ENSBMSG00010004136) #27	DNAI4 (ENSBMSG00010004008) #28	INSL5 (ENSBMSG00010003985)	DYNLT5 (ENSBMSG00010003974) #29	SGIP1 (ENSBMSG00010003712) #30	PDE4B (ENSBMSG00010003487) #31	LEPR (ENSBMSG00010003228) #32	LEPROT (ENSBMSG00010003180) #33	DNAJC6 (ENSBMSG00010003114) #34	ENSBMSG00010003088	ENSBMSG00010003064 #35
Blue whale	MODERN SPECIES	15	ENSBMSG00010003398	TIPARP (ENSBMSG00010003410)	LEKR1 (ENSBMSG00010003429)	CCNL1 (ENSBMSG00010003451)	VEPH1 (ENSBMSG00010003516)	PTX3 (ENSBMSG00010003568)	ENSBMSG00010003577	SHOX2 (ENSBMSG00010003594)	RSRC1 (ENSBMSG00010003618)	ENSBMSG00010003662	GFM1 (ENSBMSG00010003975)	LXN (ENSBMSG00010003995)	RARRES1 (ENSBMSG00010004015)	ENSBMSG00010004038	ENSBMSG00010004091	ENSBMSG00010004107 #22	IQCJ (ENSBMSG00010004126)	ENSBMSG00010004177	IL12A (ENSBMSG00010004549)	ENSBMSG00010004653	ENSBMSG00010004671	C3orf80 (ENSBMSG00010004679)	IFT80 (ENSBMSG00010004686)	SMC4 (ENSBMSG00010004719)	TRIM59 (ENSBMSG00010004844)	KPNA4 (ENSBMSG00010000052)	ARL14 (ENSBMSG00010000091)	PPM1L (ENSBMSG00010000126)	ENSBMSG00010000159	B3GALNT1 (ENSBMSG00010000184)	SPTSSB (ENSBMSG00010000213)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00520000055591.a #22
Common shrew	MODERN SPECIES	3005																SERBP1 (ENSSARG00000000803) #22
Hedgehog	MODERN SPECIES	16407																SERBP1 (ENSEEUG00000000611) #22
Euarchontoglires	ANCESTRAL SPECIES		ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00910000148470	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00390000018600	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34
Primates	ANCESTRAL SPECIES	4	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00910000148470	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00520000055591.a.k #22
Bushbaby	MODERN SPECIES	283																ENSOGAG00000028259 #22	TGFB2 (ENSOGAG00000010182)	RRP15 (ENSOGAG00000010180)	ENSOGAG00000024461	GPATCH2 (ENSOGAG00000004485)	ESRRG (ENSOGAG00000014802)	USH2A (ENSOGAG00000014786)	KCTD3 (ENSOGAG00000014778)	ENSOGAG00000008190
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.l.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Lemuriformes	ANCESTRAL SPECIES		ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312.ab #11	ENSGT00390000000312.`b #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.l.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Lemuriformes_a	ANCESTRAL SPECIES	20										ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.l.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Coquerels sifaka	MODERN SPECIES	577											DEPDC1 (ENSPCOG00000023927) #17	RPE65 (ENSPCOG00000017897) #18	WLS (ENSPCOG00000023967) #19	ENSPCOG00000003500 #20	GADD45A (ENSPCOG00000023251) #21	SERBP1 (ENSPCOG00000022373) #22	IL12RB2 (ENSPCOG00000016862) #23	IL23R (ENSPCOG00000028626) #24	C1orf141 (ENSPCOG00000019432) #25	SLC35D1 (ENSPCOG00000005606) #26	MIER1 (ENSPCOG00000015234) #27	DNAI4 (ENSPCOG00000019993) #28	INSL5 (ENSPCOG00000000197)	DYNLT5 (ENSPCOG00000014105) #29	SGIP1 (ENSPCOG00000027133) #30	PDE4B (ENSPCOG00000024642) #31
Greater bamboo lemur	MODERN SPECIES	900							ENSPSMG00000015769	ENSPSMG00000015751	DEPDC1 (ENSPSMG00000015719) #17	RPE65 (ENSPSMG00000015666) #18	ENSPSMG00000015630	WLS (ENSPSMG00000015496) #19	DIRAS3 (ENSPSMG00000015308)	GNG12 (ENSPSMG00000015293) #20	GADD45A (ENSPSMG00000015275) #21	SERBP1 (ENSPSMG00000015242) #22
Mouse lemur	MODERN SPECIES	11	PTGER3 (ENSMICG00000011907) #10	ENSMICG00000043640	ENSMICG00000037474	ENSMICG00000045385 #11	ENSMICG00000016361 #11	ANKRD13C (ENSMICG00000016341) #12	SRSF11 (ENSMICG00000005537) #13	LRRC40 (ENSMICG00000046390) #14	LRRC7 (ENSMICG00000005504) #16	DEPDC1 (ENSMICG00000002794) #17	RPE65 (ENSMICG00000002782) #18	WLS (ENSMICG00000010218) #19	ENSMICG00000026786	GNG12 (ENSMICG00000045755) #20	GADD45A (ENSMICG00000037822) #21	ENSMICG00000017733 #22	IL12RB2 (ENSMICG00000017732) #23	ENSMICG00000046171	IL23R (ENSMICG00000000494) #24	C1orf141 (ENSMICG00000004483) #25	SLC35D1 (ENSMICG00000004473) #26	MIER1 (ENSMICG00000004461) #27	ENSMICG00000043215 #28	INSL5 (ENSMICG00000047927)	DYNLT5 (ENSMICG00000046099) #29	ENSMICG00000035331	SGIP1 (ENSMICG00000004414) #30	ENSMICG00000044205	PDE4B (ENSMICG00000008570) #31	ENSMICG00000028091	LEPR (ENSMICG00000012143) #32
Bushbaby	MODERN SPECIES	125	ZRANB2 (ENSOGAG00000000485) #9	PTGER3 (ENSOGAG00000025169) #10	ENSOGAG00000031530	ANKRD13C (ENSOGAG00000027080) #12	SRSF11 (ENSOGAG00000003392) #13	LRRC40 (ENSOGAG00000003387) #14	ENSOGAG00000003378 #16	ENSOGAG00000034352 #16	ENSOGAG00000029567	DEPDC1 (ENSOGAG00000000934) #17	RPE65 (ENSOGAG00000000937) #18	WLS (ENSOGAG00000003735) #19	DIRAS3 (ENSOGAG00000003734)	GNG12 (ENSOGAG00000004629) #20	GADD45A (ENSOGAG00000032078) #21	SERBP1 (ENSOGAG00000025884) #22	IL12RB2 (ENSOGAG00000000809) #23	ENSOGAG00000006646 #24	SLC35D1 (ENSOGAG00000006641) ##26	MIER1 (ENSOGAG00000006638) #27	DNAI4 (ENSOGAG00000006629) #28	DYNLT5 (ENSOGAG00000006625) #29	SGIP1 (ENSOGAG00000006617) #30	PDE4B (ENSOGAG00000016848) #31	LEPR (ENSOGAG00000006040) #32	LEPROT (ENSOGAG00000027631) #33	DNAJC6 (ENSOGAG00000016026) #34	ENSOGAG00000016024 #35	JAK1 (ENSOGAG00000011160) #37	RAVER2 (ENSOGAG00000011157)	CACHD1 (ENSOGAG00000011152)
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00520000055591.a.l.b #22
Lemuriformes	ANCESTRAL SPECIES																	ENSGT00520000055591.a.l.b #22
Mouse lemur	MODERN SPECIES	169	ENSMICG00000042966	DCAF12L2 (ENSMICG00000004409)	PRR32 (ENSMICG00000000543)	ENSMICG00000011704	ENSMICG00000042684	ENSMICG00000026701	ENSMICG00000037227	ENSMICG00000027085	SMARCA1 (ENSMICG00000015768)	OCRL (ENSMICG00000015790)	APLN (ENSMICG00000043883)	ENSMICG00000036721	XPNPEP2 (ENSMICG00000015814)	SASH3 (ENSMICG00000026483)	ZDHHC9 (ENSMICG00000015847)	ENSMICG00000032019 #22	ENSMICG00000005161	BCORL1 (ENSMICG00000015994)	ELF4 (ENSMICG00000007427)	ENSMICG00000016006	RAB33A (ENSMICG00000034851)	ZNF280C (ENSMICG00000010604)	ENSMICG00000015126	ENSMICG00000031524	RBMX2 (ENSMICG00000015139)	ENSMICG00000047639	ENSMICG00000046419	ENSMICG00000045087	ENOX2 (ENSMICG00000000062)	ENSMICG00000032388	ARHGAP36 (ENSMICG00000001343)
Haplorrhini	ANCESTRAL SPECIES	1	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00910000148470	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	1044																SERBP1 (ENSTSYG00000011047) #22	IL12RB2 (ENSTSYG00000011026) #23	IL23R (ENSTSYG00000007136) #24	ENSTSYG00000028375
Tarsier	MODERN SPECIES	6202												IL21 (ENSTSYG00000002228)	IL2 (ENSTSYG00000029960)	ADAD1 (ENSTSYG00000008859)	BLTP1 (ENSTSYG00000010806)	ENSTSYG00000037220 #22	TRPC3 (ENSTSYG00000013045)	BBS7 (ENSTSYG00000002690)	CCNA2 (ENSTSYG00000002684)	EXOSC9 (ENSTSYG00000002664)	ENSTSYG00000034999	ANXA5 (ENSTSYG00000006323)
Simiiformes	ANCESTRAL SPECIES	3	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00910000148470	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Platyrrhini	ANCESTRAL SPECIES		ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b.r #13	ENSGT00910000148470	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000155162.c.a.b	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00940000154205.h.ab.b	ENSGT00530000064198 #24	ENSGT00390000004428.a.g.b.e.a	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	1222	PTGER3 (ENSANAG00000038521) #10	CTH (ENSANAG00000038461) #11	ENSANAG00000035214	ENSANAG00000030751 #12	ENSANAG00000034053	ENSANAG00000018690 #13	LRRC40 (ENSANAG00000028455) #14	LRRC7 (ENSANAG00000025151) #16	DEPDC1 (ENSANAG00000029940) #17	RPE65 (ENSANAG00000038489) #18	ENSANAG00000037963	WLS (ENSANAG00000035453) #19	GNG12 (ENSANAG00000036464) #20	ENSANAG00000033493	GADD45A (ENSANAG00000024828) #21	ENSANAG00000022432 #22	IL12RB2 (ENSANAG00000033363) #23	ENSANAG00000035913	IL23R (ENSANAG00000036542) #24	ENSANAG00000024382	C1orf141 (ENSANAG00000029861) #25	SLC35D1 (ENSANAG00000035895) #26	MIER1 (ENSANAG00000036304) #27	DNAI4 (ENSANAG00000035289) #28	INSL5 (ENSANAG00000038322)	DYNLT5 (ENSANAG00000025126) #29	SGIP1 (ENSANAG00000035883) #30	PDE4B (ENSANAG00000035391) #31	LEPR (ENSANAG00000003036) #32	ENSANAG00000022325	LEPROT (ENSANAG00000022539) #33
Mas night monkey	MODERN SPECIES	657															ENSANAG00000023377	ENSANAG00000034816 #22	SPIDR (ENSANAG00000029053)	ENSANAG00000029937	CEBPD (ENSANAG00000022717)	PRKDC (ENSANAG00000028345)	MCM4 (ENSANAG00000026411)	ENSANAG00000024543	ENSANAG00000027457	CLXN (ENSANAG00000032509)	SNAI2 (ENSANAG00000021163)	PPDPFL (ENSANAG00000022280)	SNTG1 (ENSANAG00000024114)	PXDNL (ENSANAG00000025434)	ENSANAG00000024030	PCMTD1 (ENSANAG00000003477)	ST18 (ENSANAG00000030299)
Cebidae	ANCESTRAL SPECIES	1	ENSGT00730000111078.o.a #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b.r #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000155162.c.a.b	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00940000154205.h.ab.b	ENSGT00530000064198 #24	ENSGT00390000004428.a.g.b.e.a	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES		ENSGT00730000111078.o.a #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b.r #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000155162.c.a.b	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.q #22	ENSGT00940000159829 #23	ENSGT00940000154205.h.ab.b	ENSGT00530000064198 #24	ENSGT00390000004428.a.g.b.e.a	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34
Capuchin	DUPLICATION
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	3	ENSCCAG00000020484	ENSCCAG00000027424	ANKRD13C (ENSCCAG00000025154) #12	ENSCCAG00000036133 #13	LRRC40 (ENSCCAG00000028127) #14	LRRC7 (ENSCCAG00000001437) #16	ENSCCAG00000029910	ENSCCAG00000022447	DEPDC1 (ENSCCAG00000037389) #17	RPE65 (ENSCCAG00000028501) #18	ENSCCAG00000035780	WLS (ENSCCAG00000031004) #19	GNG12 (ENSCCAG00000035811) #20	ENSCCAG00000022553	GADD45A (ENSCCAG00000037220) #21	ENSCCAG00000018061 #22	IL12RB2 (ENSCCAG00000018901) #23	ENSCCAG00000031024	IL23R (ENSCCAG00000026286) #24	ENSCCAG00000028263	C1orf141 (ENSCCAG00000037706) #25	ENSCCAG00000032359	SLC35D1 (ENSCCAG00000029977) #26	MIER1 (ENSCCAG00000031798) #27	DNAI4 (ENSCCAG00000028639) #28	INSL5 (ENSCCAG00000030022)	DYNLT5 (ENSCCAG00000030457) #29	SGIP1 (ENSCCAG00000024793) #30
Capuchin	MODERN SPECIES	63	LPCAT2 (ENSCCAG00000033939)	MMP2 (ENSCCAG00000021698)	IRX6 (ENSCCAG00000035521)	IRX5 (ENSCCAG00000035591)	ENSCCAG00000035759	ENSCCAG00000033265	IRX3 (ENSCCAG00000029708)	FTO (ENSCCAG00000025984)	RPGRIP1L (ENSCCAG00000026356)	AKTIP (ENSCCAG00000034526)	RBL2 (ENSCCAG00000035540)	CHD9 (ENSCCAG00000036178)	ENSCCAG00000022180	ENSCCAG00000020240	TOX3 (ENSCCAG00000024480)	ENSCCAG00000022165 #22	ENSCCAG00000022450	ENSCCAG00000021070	SALL1 (ENSCCAG00000001639)	CYLD (ENSCCAG00000030271)	NOD2 (ENSCCAG00000034885)	ENSCCAG00000026084	SNX20 (ENSCCAG00000036877)	NKD1 (ENSCCAG00000033942)	ENSCCAG00000011713	BRD7 (ENSCCAG00000023437)	ADCY7 (ENSCCAG00000023487)	TENT4B (ENSCCAG00000035345)	HEATR3 (ENSCCAG00000031847)	ENSCCAG00000035613	ZNF423 (ENSCCAG00000009645)
Capuchin	MODERN SPECIES	45	CDCA7L (ENSCCAG00000021172)	ENSCCAG00000037585	DNAH11 (ENSCCAG00000035150)	ENSCCAG00000035249	SP4 (ENSCCAG00000030472)	ENSCCAG00000033872	SP8 (ENSCCAG00000030995)	ABCB5 (ENSCCAG00000031192)	ITGB8 (ENSCCAG00000037918)	MACC1 (ENSCCAG00000013469)	TMEM196 (ENSCCAG00000030192)	POLR1F (ENSCCAG00000026416)	ENSCCAG00000020115	ENSCCAG00000019905	HDAC9 (ENSCCAG00000020834)	ENSCCAG00000027532 #22	SNX13 (ENSCCAG00000030831)	ENSCCAG00000013414	AHR (ENSCCAG00000027846)	AGR3 (ENSCCAG00000035875)	AGR2 (ENSCCAG00000037867)	TSPAN13 (ENSCCAG00000020472)	BZW2 (ENSCCAG00000028749)	ANKMY2 (ENSCCAG00000038043)	LRRC72 (ENSCCAG00000031114)	ENSCCAG00000015833	SOSTDC1 (ENSCCAG00000014167)	ENSCCAG00000035776	ENSCCAG00000028518	CRPPA (ENSCCAG00000033258)
Bolivian squirrel monkey	MODERN SPECIES	45	ENSSBOG00000013268 #9	PTGER3 (ENSSBOG00000032109) #10	CTH (ENSSBOG00000004834) #11	ENSSBOG00000033163	ANKRD13C (ENSSBOG00000035265) #12	SRSF11 (ENSSBOG00000033461) #13	LRRC40 (ENSSBOG00000033042) #14	LRRC7 (ENSSBOG00000023202) #16	ENSSBOG00000024654	DEPDC1 (ENSSBOG00000032526) #17	RPE65 (ENSSBOG00000020711) #18	ENSSBOG00000017047	WLS (ENSSBOG00000029071) #19	GNG12 (ENSSBOG00000023413) #20	GADD45A (ENSSBOG00000026960) #21	SERBP1 (ENSSBOG00000034290) #22	IL12RB2 (ENSSBOG00000033618) #23	IL23R (ENSSBOG00000031496) #24	C1orf141 (ENSSBOG00000020938) #25	SLC35D1 (ENSSBOG00000033454) #26	MIER1 (ENSSBOG00000023688) #27	DNAI4 (ENSSBOG00000021867) #28	INSL5 (ENSSBOG00000021914)	DYNLT5 (ENSSBOG00000026948) #29	SGIP1 (ENSSBOG00000032865) #30	PDE4B (ENSSBOG00000028805) #31	LEPR (ENSSBOG00000024199) #32	ENSSBOG00000012974	LEPROT (ENSSBOG00000027406) #33	DNAJC6 (ENSSBOG00000032291) #34	ENSSBOG00000015490 #35
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00520000055591.a.r #22
Capuchin	MODERN SPECIES	325										CYP19A1 (ENSCCAG00000022272)	GLDN (ENSCCAG00000027562)	DMXL2 (ENSCCAG00000031705)	SCG3 (ENSCCAG00000018814)	LYSMD2 (ENSCCAG00000037360)	TMOD2 (ENSCCAG00000022858)	ENSCCAG00000038068 #22	TMOD3 (ENSCCAG00000036997)	LEO1 (ENSCCAG00000025911)	MAPK6 (ENSCCAG00000026546)	ENSCCAG00000031947	GNB5 (ENSCCAG00000034924)	MYO5C (ENSCCAG00000032934)	ENSCCAG00000032533	ENSCCAG00000034030	ENSCCAG00000025828	MYO5A (ENSCCAG00000001972)	ARPP19 (ENSCCAG00000022191)	FAM214A (ENSCCAG00000032913)	ONECUT1 (ENSCCAG00000027805)	ENSCCAG00000037326	WDR72 (ENSCCAG00000026897)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	19	SRSF11 (ENSCJAG00000017704) #13	LRRC40 (ENSCJAG00000017669) #14	ENSCJAG00000071796	ENSCJAG00000043397	LRRC7 (ENSCJAG00000017648) #16	ENSCJAG00000083418	ENSCJAG00000084344	DEPDC1 (ENSCJAG00000017579) #17	RPE65 (ENSCJAG00000017542) #18	ENSCJAG00000041466	ENSCJAG00000079987	WLS (ENSCJAG00000017517) #19	GNG12 (ENSCJAG00000077874) #20	GADD45A (ENSCJAG00000083486) #21	IL12RB2 (ENSCJAG00000017427) #23	ENSCJAG00000017440 #22	IL23R (ENSCJAG00000017407) #24	ENSCJAG00000031526	C1orf141 (ENSCJAG00000017398) #25	SLC35D1 (ENSCJAG00000017361) #26	MIER1 (ENSCJAG00000017276) #27	DNAI4 (ENSCJAG00000017231) #28	DYNLT5 (ENSCJAG00000039041) #29	SGIP1 (ENSCJAG00000017101) #30	PDE4B (ENSCJAG00000017022) #31	LEPR (ENSCJAG00000016945) #32	LEPROT (ENSCJAG00000039286) #33	DNAJC6 (ENSCJAG00000016859) #34	ENSCJAG00000046466 #35	JAK1 (ENSCJAG00000016743) #37	RAVER2 (ENSCJAG00000016724)
Marmoset	MODERN SPECIES	3	ENSCJAG00000074077	TNKS2 (ENSCJAG00000008230)	PPP1R3C (ENSCJAG00000075367)	HECTD2 (ENSCJAG00000010937)	ENSCJAG00000070442	PCGF5 (ENSCJAG00000011001)	ANKRD1 (ENSCJAG00000011021)	RPP30 (ENSCJAG00000011045)	HTR7 (ENSCJAG00000011075)	ENSCJAG00000085126	KIF20B (ENSCJAG00000011110)	PANK1 (ENSCJAG00000011177)	SLC16A12 (ENSCJAG00000039416)	IFIT5 (ENSCJAG00000011216)	ENSCJAG00000069816	ENSCJAG00000035375 #22	IFIT1 (ENSCJAG00000005746)	IFIT3 (ENSCJAG00000005737)	LIPA (ENSCJAG00000005689)	FAS (ENSCJAG00000005615)	ACTA2 (ENSCJAG00000005576)	STAMBPL1 (ENSCJAG00000005484)	ANKRD22 (ENSCJAG00000052310)	LIPM (ENSCJAG00000005454)	LIPN (ENSCJAG00000005432)	LIPK (ENSCJAG00000005403)	LIPF (ENSCJAG00000005360)	RNLS (ENSCJAG00000045289)	ENSCJAG00000040914	ENSCJAG00000061153	ATAD1 (ENSCJAG00000005296)
Catarrhini	ANCESTRAL SPECIES	3	ENSGT01030000234559.b #10	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Hominoidea	ANCESTRAL SPECIES	3	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00640000091578.m.a	ENSGT00950000182976.b.a.l.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Hominidae	DUPLICATION
Hominidae	ANCESTRAL SPECIES	3	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00640000091578.m.a	ENSGT00950000182976.b.a.l.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.u #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	3	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00640000091578.m.a	ENSGT00950000182976.b.a.l.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.u #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Gorilla	MODERN SPECIES		ENSGGOG00000017176	CTH (ENSGGOG00000016539) #11	ENSGGOG00000043475	ANKRD13C (ENSGGOG00000016397) #12	SRSF11 (ENSGGOG00000005774) #13	LRRC40 (ENSGGOG00000000470) #14	ENSGGOG00000026287	LRRC7 (ENSGGOG00000015111) #16	DEPDC1 (ENSGGOG00000016316) #17	RPE65 (ENSGGOG00000009677) #18	ENSGGOG00000039762	WLS (ENSGGOG00000015460) #19	DIRAS3 (ENSGGOG00000043773)	GNG12 (ENSGGOG00000042148) #20	GADD45A (ENSGGOG00000010780) #21	SERBP1 (ENSGGOG00000010396) #22	IL12RB2 (ENSGGOG00000006395) #23	ENSGGOG00000041169	IL23R (ENSGGOG00000006543) #24	C1orf141 (ENSGGOG00000002630) #25	SLC35D1 (ENSGGOG00000009038) #26	MIER1 (ENSGGOG00000008663) #27	DNAI4 (ENSGGOG00000022093) #28	INSL5 (ENSGGOG00000027684)	DYNLT5 (ENSGGOG00000002407) #29	SGIP1 (ENSGGOG00000022052) #30	ENSGGOG00000042676	PDE4B (ENSGGOG00000006774) #31	LEPR (ENSGGOG00000000076) #32	LEPROT (ENSGGOG00000036673) #33	DNAJC6 (ENSGGOG00000010799) #34
Homo/Pan group	ANCESTRAL SPECIES	4	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00640000091578.m.a	ENSGT00950000182976.b.a.l.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.u #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Pan	ANCESTRAL SPECIES		ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00640000091578.m.a	ENSGT00950000182976.b.a.l.a #17	ENSGT00950000182913.B #18	ENSGT00390000014122.i.a.a	ENSGT00940000154430.e.a.a	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.u #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148214	ENSGT00730000111209 #32	ENSGT01100000263543.a.g.a	ENSGT00390000006503.a #33	ENSGT00940000158755 #34
Chimpanzee	MODERN SPECIES		CTH (ENSPTRG00000000854) #11	ENSPTRG00000024173	ANKRD13C (ENSPTRG00000000853) #12	SRSF11 (ENSPTRG00000000852) #13	LRRC40 (ENSPTRG00000000850) #14	ENSPTRG00000049950	LRRC7 (ENSPTRG00000000848) #16	DEPDC1 (ENSPTRG00000000847) #17	RPE65 (ENSPTRG00000000846) #18	ENSPTRG00000048041	ENSPTRG00000050855	WLS (ENSPTRG00000000845) #19	DIRAS3 (ENSPTRG00000046970)	GNG12 (ENSPTRG00000048598) #20	GADD45A (ENSPTRG00000000842) #21	SERBP1 (ENSPTRG00000023560) #22	IL12RB2 (ENSPTRG00000000840) #23	ENSPTRG00000050354	IL23R (ENSPTRG00000000839) #24	C1H1orf141 (ENSPTRG00000030574) #25	SLC35D1 (ENSPTRG00000000838) #26	MIER1 (ENSPTRG00000000837) #27	DNAI4 (ENSPTRG00000043837) #28	INSL5 (ENSPTRG00000000835)	DYNLT5 (ENSPTRG00000050524) #29	SGIP1 (ENSPTRG00000000832) #30	ENSPTRG00000046740	PDE4B (ENSPTRG00000000831) #31	LEPR (ENSPTRG00000034314) #32	ENSPTRG00000052596	LEPROT (ENSPTRG00000046978) #33
Bonobo	MODERN SPECIES		DNAJC6 (ENSPPAG00000027682) #34	LEPROT (ENSPPAG00000026304) #33	ENSPPAG00000030271	LEPR (ENSPPAG00000034852) #32	PDE4B (ENSPPAG00000033320) #31	ENSPPAG00000032121	SGIP1 (ENSPPAG00000041547) #30	DYNLT5 (ENSPPAG00000043796) #29	INSL5 (ENSPPAG00000024922)	DNAI4 (ENSPPAG00000030982) #28	MIER1 (ENSPPAG00000036218) #27	SLC35D1 (ENSPPAG00000027327) #26	C1orf141 (ENSPPAG00000023141) #25	IL23R (ENSPPAG00000019836) #24	ENSPPAG00000018218	SERBP1 (ENSPPAG00000027596) #22	IL12RB2 (ENSPPAG00000029198) #23	GADD45A (ENSPPAG00000042185) #21	ENSPPAG00000018008	GNG12 (ENSPPAG00000036419) #20	DIRAS3 (ENSPPAG00000024921)	WLS (ENSPPAG00000033112) #19	ENSPPAG00000032814	ENSPPAG00000033442	RPE65 (ENSPPAG00000042629) #18	DEPDC1 (ENSPPAG00000037667) #17	LRRC7 (ENSPPAG00000043123) #16	ENSPPAG00000027412	LRRC40 (ENSPPAG00000034906) #14	SRSF11 (ENSPPAG00000036149) #13	ANKRD13C (ENSPPAG00000034786) #12
Human	MODERN SPECIES		LRRIQ3 (ENSG00000162620)	NEGR1 (ENSG00000172260) #8	ZRANB2 (ENSG00000132485) #9	PTGER3 (ENSG00000050628) #10	CTH (ENSG00000116761) #11	ANKRD13C (ENSG00000118454) #12	SRSF11 (ENSG00000116754) #13	LRRC40 (ENSG00000066557) #14	LRRC7 (ENSG00000033122) #16	DEPDC1 (ENSG00000024526) #17	RPE65 (ENSG00000116745) #18	WLS (ENSG00000116729) #19	DIRAS3 (ENSG00000162595)	GNG12 (ENSG00000172380) #20	GADD45A (ENSG00000116717) #21	SERBP1 (ENSG00000142864) #22	IL12RB2 (ENSG00000081985) #23	IL23R (ENSG00000162594) #24	C1orf141 (ENSG00000203963) #25	SLC35D1 (ENSG00000116704) #26	MIER1 (ENSG00000198160) #27	DNAI4 (ENSG00000152763) #28	INSL5 (ENSG00000172410)	DYNLT5 (ENSG00000152760) #29	SGIP1 (ENSG00000118473) #30	PDE4B (ENSG00000184588) #31	LEPR (ENSG00000116678) #32	LEPROT (ENSG00000213625) #33	DNAJC6 (ENSG00000116675) #34	AK4 (ENSG00000162433) #35	JAK1 (ENSG00000162434) #37
Hominidae	DUPLICATION
Hominidae	ANCESTRAL SPECIES	8	ENSGT00940000153902.b	ENSGT00940000162717	ENSGT00950000182870.a.a.b.i.b	ENSGT00390000018389	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a.c	ENSGT00390000001432	ENSGT00940000153336.e.a.a.a.b.a.b	ENSGT00940000158517	ENSGT00940000153259.a.a.a	ENSGT00940000155516	ENSGT00940000160157	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00520000055591.a.v.a #22	ENSGT00940000160128	ENSGT00940000154585.b	ENSGT00940000161362	ENSGT00390000000080.a.a.i.b	ENSGT00730000111220	ENSGT01030000234582.f.a.a.a.b	ENSGT00940000163556	ENSGT00390000002414.`b.a.a	ENSGT01030000234582.f.a.a.a.a	ENSGT01030000234582.f.a.a.b	ENSGT01030000234621.C.a.a.a	ENSGT00950000182887.C.b.b	ENSGT00940000163684	ENSGT00940000153222.a.b.b.b.b.k.a	ENSGT00940000158195
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a.c	ENSGT00940000154453.b.a.b.b	ENSGT00390000001432	ENSGT00940000153336.e.a.a.a.b.a.b	ENSGT00940000158517	ENSGT00390000008859.b.d.k.a.b.b	ENSGT00940000153259.a.a.a	ENSGT00940000155516	ENSGT00940000160157	ENSGT00390000008820.e.b.a.a.a	ENSGT00900000143202.b	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00520000055591.a.v.a #22	ENSGT00940000160128	ENSGT00940000154585.b	ENSGT00940000161362	ENSGT00730000111220	ENSGT00390000000080.a.a.i.b	ENSGT01030000234582.f.a.a.a.b	ENSGT00940000163556	ENSGT00390000002414.`b.a.a	ENSGT01030000234582.f.a.a.a.a	ENSGT01030000234582.f.a.a.b	ENSGT01030000234621.C.a.a.a	ENSGT00950000182887.C.b.b	ENSGT00940000163684	ENSGT00940000153222.a.b.b.b.b.k.a	ENSGT00940000158195
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00940000159316	ENSGT00390000014785	ENSGT01090000260082.d.a.a.a.a.c	ENSGT00940000154453.b.a.b.b	ENSGT00390000001432	ENSGT00940000153336.e.a.a.a.b.a.b	ENSGT00940000158517	ENSGT00390000008859.b.d.k.a.b.b	ENSGT00940000153259.a.a.a	ENSGT00940000155516	ENSGT00940000160157	ENSGT00390000008820.e.b.a.a.a	ENSGT00900000143202.b	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00520000055591.a.v.a #22	ENSGT00940000160128	ENSGT00940000154585.b	ENSGT00940000161362	ENSGT00390000000080.a.a.i.b	ENSGT00730000111220	ENSGT01030000234582.f.a.a.a.b	ENSGT00940000163556	ENSGT00390000002414.`b.a.a	ENSGT01030000234582.f.a.a.a.a	ENSGT01030000234582.f.a.a.b	ENSGT01030000234621.C.a.a.a	ENSGT00950000182887.C.b.b	ENSGT00940000163684	ENSGT00940000153222.a.b.b.b.b.k.a	ENSGT00940000158195
Pan	ANCESTRAL SPECIES	6	ENSGT00390000014785	ENSGT00530000063721.B.j	ENSGT01090000260082.d.a.a.a.a.c	ENSGT00940000154453.b.a.b.b	ENSGT00390000001432	ENSGT00940000153336.e.a.a.a.b.a.b	ENSGT00940000158517	ENSGT00390000008859.b.d.k.a.b.b	ENSGT00940000153259.a.a.a	ENSGT00940000155516	ENSGT00940000160157	ENSGT00390000008820.e.b.a.a.a	ENSGT00900000143202.b	ENSGT00940000153168.A	ENSGT00950000183061.a.a.a.a.b	ENSGT00520000055591.a.v.a #22	ENSGT00940000160128	ENSGT00940000161362	ENSGT00390000000080.a.a.i.b	ENSGT00730000111220	ENSGT01030000234582.f.a.a.a.b	ENSGT00940000163556	ENSGT00390000002414.`b.a.a	ENSGT01030000234582.f.a.a.a.a	ENSGT01030000234582.f.a.a.b	ENSGT01030000234621.C.a.a.a	ENSGT00950000182887.C.b.b	ENSGT00940000163684	ENSGT00940000153222.a.b.b.b.b.k.a	ENSGT00940000158195	ENSGT00510000047505.c.a
Chimpanzee	MODERN SPECIES	972	LAS1L (ENSPTRG00000021970)	ENSPTRG00000047745	MSN (ENSPTRG00000043871)	ENSPTRG00000048378	ENSPTRG00000052470	VSIG4 (ENSPTRG00000021973)	ENSPTRG00000049274	HEPH (ENSPTRG00000046447)	ENSPTRG00000044272	EDA2R (ENSPTRG00000021977)	AR (ENSPTRG00000032525)	OPHN1 (ENSPTRG00000021979)	ENSPTRG00000051896	YIPF6 (ENSPTRG00000051628)	STARD8 (ENSPTRG00000021982)	ENSPTRG00000048835 #22	EFNB1 (ENSPTRG00000051100)	NALF2 (ENSPTRG00000043476)	EDA (ENSPTRG00000021988)	ENSPTRG00000047182	AWAT2 (ENSPTRG00000021989)	OTUD6A (ENSPTRG00000028260)	IGBP1 (ENSPTRG00000021990)	DGAT2L6 (ENSPTRG00000021991)	AWAT1 (ENSPTRG00000028259)	P2RY4 (ENSPTRG00000034427)	ARR3 (ENSPTRG00000021993)	RAB41 (ENSPTRG00000021994)	PDZD11 (ENSPTRG00000021995)	KIF4A (ENSPTRG00000021996)	ENSPTRG00000008468
Bonobo	MODERN SPECIES	369	ENSPPAG00000029012	MSN (ENSPPAG00000034551)	ENSPPAG00000033953	ENSPPAG00000031010	VSIG4 (ENSPPAG00000033935)	ENSPPAG00000038159	HEPH (ENSPPAG00000037746)	EDA2R (ENSPPAG00000001055)	AR (ENSPPAG00000038688)	OPHN1 (ENSPPAG00000021549)	ENSPPAG00000043601	ENSPPAG00000040306	YIPF6 (ENSPPAG00000041673)	STARD8 (ENSPPAG00000020692)	ENSPPAG00000039447	ENSPPAG00000031265 #22	EFNB1 (ENSPPAG00000040468)	ENSPPAG00000026849	ENSPPAG00000038479	ENSPPAG00000037110	AWAT2 (ENSPPAG00000038307)	OTUD6A (ENSPPAG00000022933)	IGBP1 (ENSPPAG00000042611)	DGAT2L6 (ENSPPAG00000033674)	AWAT1 (ENSPPAG00000042645)	P2RY4 (ENSPPAG00000001712)	ARR3 (ENSPPAG00000029521)	RAB41 (ENSPPAG00000032671)	PDZD11 (ENSPPAG00000040728)	KIF4A (ENSPPAG00000037881)	ENSPPAG00000041566
Orangutan	MODERN SPECIES	242	AMER1 (ENSPPYG00000020412)	ASB12 (ENSPPYG00000020413)	MTMR8 (ENSPPYG00000020414)	ZC4H2 (ENSPPYG00000020415)	ZC3H12B (ENSPPYG00000020416)	LAS1L (ENSPPYG00000020417)	MSN (ENSPPYG00000020419)	ENSPPYG00000035651	VSIG4 (ENSPPYG00000020421)	HEPH (ENSPPYG00000020422)	EDA2R (ENSPPYG00000020424)	AR (ENSPPYG00000020425)	OPHN1 (ENSPPYG00000020426)	YIPF6 (ENSPPYG00000033984)	STARD8 (ENSPPYG00000020428)	ENSPPYG00000031778 #22	EFNB1 (ENSPPYG00000031789)	PJA1 (ENSPPYG00000020429)	NALF2 (ENSPPYG00000020431)	EDA (ENSPPYG00000020432)	ENSPPYG00000032421	ENSPPYG00000034779	AWAT2 (ENSPPYG00000020433)	OTUD6A (ENSPPYG00000020434)	IGBP1 (ENSPPYG00000020435)	DGAT2L6 (ENSPPYG00000020436)	AWAT1 (ENSPPYG00000020437)	P2RY4 (ENSPPYG00000036141)	ARR3 (ENSPPYG00000020927)	RAB41 (ENSPPYG00000020928)	PDZD11 (ENSPPYG00000020929)
Hominidae	ANCESTRAL SPECIES																	ENSGT00520000055591.a.v.b #22
Orangutan	MODERN SPECIES		NEGR1 (ENSPPYG00000001239) #8	ZRANB2 (ENSPPYG00000001240) #9	PTGER3 (ENSPPYG00000001241) #10	ENSPPYG00000037732	CTH (ENSPPYG00000001242) #11	ENSPPYG00000001243	ANKRD13C (ENSPPYG00000001244) #12	SRSF11 (ENSPPYG00000001245) #13	LRRC40 (ENSPPYG00000001246) #14	LRRC7 (ENSPPYG00000001247) #16	DEPDC1 (ENSPPYG00000001248) #17	RPE65 (ENSPPYG00000001249) #18	WLS (ENSPPYG00000001251) #19	DIRAS3 (ENSPPYG00000001252)	GADD45A (ENSPPYG00000001254) #21	ENSPPYG00000001256 #22	IL12RB2 (ENSPPYG00000001257) #23	IL23R (ENSPPYG00000001258) #24	C1orf141 (ENSPPYG00000001259) #25	SLC35D1 (ENSPPYG00000041264) #26	MIER1 (ENSPPYG00000001261) #27	DNAI4 (ENSPPYG00000001262) #28	INSL5 (ENSPPYG00000001263)	DYNLT5 (ENSPPYG00000001264) #29	SGIP1 (ENSPPYG00000001265) #30	PDE4B (ENSPPYG00000001266) #31	LEPR (ENSPPYG00000001267) #32	LEPROT (ENSPPYG00000035587) #33	DNAJC6 (ENSPPYG00000010671) #34	AK4 (ENSPPYG00000001269) #35	JAK1 (ENSPPYG00000001270) #37
Gibbon	MODERN SPECIES	2	CTH (ENSNLEG00000009419) #11	ENSNLEG00000027424	ANKRD13C (ENSNLEG00000033393) #12	SRSF11 (ENSNLEG00000009400) #13	LRRC40 (ENSNLEG00000009378) #14	LRRC7 (ENSNLEG00000009348) #16	ENSNLEG00000029046	ENSNLEG00000029967	DEPDC1 (ENSNLEG00000009334) #17	RPE65 (ENSNLEG00000009313) #18	ENSNLEG00000034379	WLS (ENSNLEG00000009266) #19	DIRAS3 (ENSNLEG00000029641)	GNG12 (ENSNLEG00000032969) #20	GADD45A (ENSNLEG00000009242) #21	SERBP1 (ENSNLEG00000009237) #22	IL12RB2 (ENSNLEG00000009216) #23	IL23R (ENSNLEG00000009199) #24
Cercopithecidae	ANCESTRAL SPECIES	2	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Cercopithecinae	ANCESTRAL SPECIES		ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Vervet Monkey	MODERN SPECIES	12	ENSCSAG00000001379	PTGER3 (ENSCSAG00000001378) #10	ENSCSAG00000000152	CTH (ENSCSAG00000001377) #11	ANKRD13C (ENSCSAG00000001376) #12	SRSF11 (ENSCSAG00000001375) #13	LRRC40 (ENSCSAG00000001374) #14	LRRC7 (ENSCSAG00000001373) #16	ENSCSAG00000001372	DEPDC1 (ENSCSAG00000001371) #17	RPE65 (ENSCSAG00000001370) #18	WLS (ENSCSAG00000001369) #19	DIRAS3 (ENSCSAG00000000151)	GNG12 (ENSCSAG00000001367) #20	GADD45A (ENSCSAG00000001366) #21	SERBP1 (ENSCSAG00000001365) #22	IL12RB2 (ENSCSAG00000001364) #23	IL23R (ENSCSAG00000001363) #24	C1orf141 (ENSCSAG00000001362) #25	SLC35D1 (ENSCSAG00000001361) #26	MIER1 (ENSCSAG00000001360) #27	DNAI4 (ENSCSAG00000001359) #28	INSL5 (ENSCSAG00000001358)	DYNLT5 (ENSCSAG00000001357) #29	SGIP1 (ENSCSAG00000001356) #30	PDE4B (ENSCSAG00000001355) #31	LEPR (ENSCSAG00000001354) #32	LEPROT (ENSCSAG00000001353) #33	DNAJC6 (ENSCSAG00000001352) #34	JAK1 (ENSCSAG00000001351) #37	RAVER2 (ENSCSAG00000001350)
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT00390000000312 #11	ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000154430.e.a	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Macaca	ANCESTRAL SPECIES		ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00390000016438.l	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000154430.e.a	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00910000147273	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35	ENSGT00940000157092 #37
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000159289 #8	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.a.a.b.b.a.a.a.a.a.a.a.b	ENSGT00730000111078.n #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00390000016438.l	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT01100000263493.a.a.b.b.b.d.a.a	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Rhesus	MODERN SPECIES		ZRANB2 (ENSMMUG00000017312) #9	PTGER3 (ENSMMUG00000017309) #10	CTH (ENSMMUG00000019326) #11	ANKRD13C (ENSMMUG00000013853) #12	SRSF11 (ENSMMUG00000013852) #13	LRRC40 (ENSMMUG00000021921) #14	ENSMMUG00000063902	LRRC7 (ENSMMUG00000021917) #16	ENSMMUG00000007527	DEPDC1 (ENSMMUG00000017766) #17	RPE65 (ENSMMUG00000002752) #18	WLS (ENSMMUG00000022908) #19	DIRAS3 (ENSMMUG00000013333)	GNG12 (ENSMMUG00000014807)	GADD45A (ENSMMUG00000056103) #21	SERBP1 (ENSMMUG00000000652) #22	ENSMMUG00000054458	IL12RB2 (ENSMMUG00000000651) #23	ENSMMUG00000060609	IL23R (ENSMMUG00000000648) #24	C1H1orf141 (ENSMMUG00000000647) #25	SLC35D1 (ENSMMUG00000000645) #26	MIER1 (ENSMMUG00000000643) #27	DNAI4 (ENSMMUG00000000641) #28	INSL5 (ENSMMUG00000051044)	DYNLT5 (ENSMMUG00000000638) #29	SGIP1 (ENSMMUG00000000637) #30	PDE4B (ENSMMUG00000007490) #31	LEPR (ENSMMUG00000003265) #32	LEPROT (ENSMMUG00000003264) #33	DNAJC6 (ENSMMUG00000017259) #34
Crab-eating macaque	MODERN SPECIES		ENSMFAG00000065809	ENSMFAG00000003326 #9	PTGER3 (ENSMFAG00000040520) #10	CTH (ENSMFAG00000040329) #11	ANKRD13C (ENSMFAG00000042830) #12	ENSMFAG00000058749	SRSF11 (ENSMFAG00000043405) #13	LRRC40 (ENSMFAG00000028307) #14	LRRC7 (ENSMFAG00000031304) #16	ENSMFAG00000036815	DEPDC1 (ENSMFAG00000036197) #17	RPE65 (ENSMFAG00000043407) #18	WLS (ENSMFAG00000030065) #19	DIRAS3 (ENSMFAG00000059613)	GADD45A (ENSMFAG00000043026) #21	SERBP1 (ENSMFAG00000036635) #22	IL12RB2 (ENSMFAG00000044595) #23	ENSMFAG00000064282	IL23R (ENSMFAG00000003679) #24	C1orf141 (ENSMFAG00000044140) #25	SLC35D1 (ENSMFAG00000025789) #26	ENSMFAG00000048772	MIER1 (ENSMFAG00000043942) #27	DNAI4 (ENSMFAG00000033193) #28	INSL5 (ENSMFAG00000003313)	DYNLT5 (ENSMFAG00000044785) #29	SGIP1 (ENSMFAG00000045356) #30	PDE4B (ENSMFAG00000000162) #31	LEPR (ENSMFAG00000001122) #32	LEPROT (ENSMFAG00000033874) #33	DNAJC6 (ENSMFAG00000044659) #34
Pig-tailed macaque	MODERN SPECIES	266													GNG12 (ENSMNEG00000044463) #20	ENSMNEG00000035312	GADD45A (ENSMNEG00000028909) #21	SERBP1 (ENSMNEG00000027600) #22	IL12RB2 (ENSMNEG00000032662) #23	IL23R (ENSMNEG00000041313) #24	C1orf141 (ENSMNEG00000038606) #25	SLC35D1 (ENSMNEG00000041724) #26	MIER1 (ENSMNEG00000038429) #27	DNAI4 (ENSMNEG00000035999) #28	INSL5 (ENSMNEG00000035290)	DYNLT5 (ENSMNEG00000043428) #29	SGIP1 (ENSMNEG00000030767) #30	PDE4B (ENSMNEG00000042008) #31	LEPR (ENSMNEG00000033137) #32	LEPROT (ENSMNEG00000033772) #33	DNAJC6 (ENSMNEG00000029908) #34	ENSMNEG00000035202 #35	JAK1 (ENSMNEG00000008188) #37
Cercopithecinae_b	ANCESTRAL SPECIES	1	ENSGT01030000234559.b #10	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000154430.e.a	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.a #35
Cercopithecinae_d	ANCESTRAL SPECIES	19	ENSGT00940000154174.s.a.b	ENSGT00390000000312 #11	ENSGT00940000155155.d	ENSGT00410000028138	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00940000165544	ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00940000154430.e.a	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568.q.a.a.b.a #35
Sooty mangabey	MODERN SPECIES	238	ENSCATG00000040340	CTH (ENSCATG00000043574) #11	ENSCATG00000031068	ENSCATG00000035218	ANKRD13C (ENSCATG00000014535) #12	SRSF11 (ENSCATG00000043613) #13	LRRC40 (ENSCATG00000004246) #14	LRRC7 (ENSCATG00000042304) #16	ENSCATG00000039264	DEPDC1 (ENSCATG00000004444) #17	RPE65 (ENSCATG00000021512) #18	WLS (ENSCATG00000002594) #19	ENSCATG00000040157	GNG12 (ENSCATG00000012440) #20	GADD45A (ENSCATG00000040913) #21	SERBP1 (ENSCATG00000041393) #22	IL12RB2 (ENSCATG00000018629) #23	ENSCATG00000030460	ENSCATG00000031536	IL23R (ENSCATG00000043155) #24	C1orf141 (ENSCATG00000030751) #25	SLC35D1 (ENSCATG00000044973) #26	MIER1 (ENSCATG00000040832) #27	DNAI4 (ENSCATG00000039576) #28	INSL5 (ENSCATG00000029366)	DYNLT5 (ENSCATG00000010584) #29	SGIP1 (ENSCATG00000038351) #30	PDE4B (ENSCATG00000039238) #31	ENSCATG00000034318	LEPR (ENSCATG00000032495) #32	LEPROT (ENSCATG00000035075) #33
Drill	MODERN SPECIES	1151										DEPDC1 (ENSMLEG00000033775) #17	RPE65 (ENSMLEG00000031729) #18	ENSMLEG00000029003	WLS (ENSMLEG00000038942) #19	GNG12 (ENSMLEG00000038713) #20	GADD45A (ENSMLEG00000033790) #21	SERBP1 (ENSMLEG00000035841) #22	IL12RB2 (ENSMLEG00000035295) #23	IL23R (ENSMLEG00000036045) #24	C1orf141 (ENSMLEG00000032420) #25	SLC35D1 (ENSMLEG00000024346) #26	MIER1 (ENSMLEG00000041550) #27	DNAI4 (ENSMLEG00000042641) #28	INSL5 (ENSMLEG00000030103)	DYNLT5 (ENSMLEG00000039935) #29	SGIP1 (ENSMLEG00000023612) #30	PDE4B (ENSMLEG00000039969) #31
Olive baboon	MODERN SPECIES		ZRANB2 (ENSPANG00000013398) #9	PTGER3 (ENSPANG00000006005) #10	ENSPANG00000044968	CTH (ENSPANG00000009664) #11	ANKRD13C (ENSPANG00000022425) #12	SRSF11 (ENSPANG00000018677) #13	LRRC40 (ENSPANG00000004753) #14	LRRC7 (ENSPANG00000012864) #16	DEPDC1 (ENSPANG00000020338) #17	RPE65 (ENSPANG00000007871) #18	WLS (ENSPANG00000022426) #19	DIRAS3 (ENSPANG00000038255)	ENSPANG00000039979	GNG12 (ENSPANG00000050175) #20	GADD45A (ENSPANG00000005666) #21	SERBP1 (ENSPANG00000005883) #22	IL12RB2 (ENSPANG00000025662) #23	IL23R (ENSPANG00000000873) #24	ENSPANG00000049986	ENSPANG00000044457	C1orf141 (ENSPANG00000010612) #25	SLC35D1 (ENSPANG00000010289) #26	MIER1 (ENSPANG00000022218) #27	DNAI4 (ENSPANG00000005715) #28	INSL5 (ENSPANG00000023469)	DYNLT5 (ENSPANG00000016821) #29	SGIP1 (ENSPANG00000020215) #30	ENSPANG00000039640	PDE4B (ENSPANG00000008973) #31	ENSPANG00000047632 #32	ENSPANG00000017953 #32
Rhinopithecus	ANCESTRAL SPECIES	10									ENSGT00950000182976.b.a.l #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000154430.e.a	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00940000154095.b.a	ENSGT00940000154205.h	ENSGT00940000156321	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00910000148334	ENSGT00730000111209 #32
Golden snub-nosed monkey	MODERN SPECIES	3150											WLS (ENSRROG00000044981) #19	ENSRROG00000028816	DIRAS3 (ENSRROG00000028393)	GNG12 (ENSRROG00000044260) #20	GADD45A (ENSRROG00000032533) #21	SERBP1 (ENSRROG00000041079) #22	IL12RB2 (ENSRROG00000038878) #23	ENSRROG00000034482	IL23R (ENSRROG00000043794) #24	C1orf141 (ENSRROG00000040890) #25	SLC35D1 (ENSRROG00000037180) #26	MIER1 (ENSRROG00000030126) #27	DNAI4 (ENSRROG00000037211) #28	ENSRROG00000006379	INSL5 (ENSRROG00000036668)	DYNLT5 (ENSRROG00000037150) #29	SGIP1 (ENSRROG00000042341) #30	PDE4B (ENSRROG00000023516) #31
Black snub-nosed monkey	DUPLICATION
Black snub-nosed monkey	MODERN SPECIES	569								ENSRBIG00000009164	DEPDC1 (ENSRBIG00000037735) #17	RPE65 (ENSRBIG00000017984) #18	WLS (ENSRBIG00000033595) #19	ENSRBIG00000034757	DIRAS3 (ENSRBIG00000008401)	GNG12 (ENSRBIG00000039245) #20	GADD45A (ENSRBIG00000042903) #21	ENSRBIG00000040591 #22	IL12RB2 (ENSRBIG00000044278) #23	ENSRBIG00000040301	ENSRBIG00000031720	IL23R (ENSRBIG00000030662) #24	C1orf141 (ENSRBIG00000032392) #25	SLC35D1 (ENSRBIG00000037258) #26	MIER1 (ENSRBIG00000036441) #27	DNAI4 (ENSRBIG00000031969) #28	INSL5 (ENSRBIG00000044118)	DYNLT5 (ENSRBIG00000030373) #29	SGIP1 (ENSRBIG00000012071) #30	PDE4B (ENSRBIG00000043330) #31	ENSRBIG00000035828	LEPR (ENSRBIG00000038066) #32	LEPROT (ENSRBIG00000032071) #33
Black snub-nosed monkey	MODERN SPECIES	278																ENSRBIG00000044406 #22	PTER (ENSRBIG00000040043)	C1QL3 (ENSRBIG00000040157)	RSU1 (ENSRBIG00000032950)	CUBN (ENSRBIG00000038894)	TRDMT1 (ENSRBIG00000034410)	VIM (ENSRBIG00000028816)	ENSRBIG00000033723	ST8SIA6 (ENSRBIG00000032235)	ENSRBIG00000018242	HACD1 (ENSRBIG00000032558)	STAM (ENSRBIG00000029794)	TMEM236 (ENSRBIG00000032710)	MRC1 (ENSRBIG00000015790)	SLC39A12 (ENSRBIG00000036728)	CACNB2 (ENSRBIG00000034497)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Tree shrew	MODERN SPECIES	2594														GNG12 (ENSTBEG00000003964) #20	GADD45A (ENSTBEG00000003869) #21	SERBP1 (ENSTBEG00000003689) #22	IL12RB2 (ENSTBEG00000003548) #23	IL23R (ENSTBEG00000003384) #24	ENSTBEG00000003370 #25	SLC35D1 (ENSTBEG00000003275) #26	MIER1 (ENSTBEG00000003139) #27	DNAI4 (ENSTBEG00000002658) #28
Glires	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Lagomorpha	ANCESTRAL SPECIES	8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00900000141068.t	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000165286 #15	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Rabbit	MODERN SPECIES	4	ZRANB2 (ENSOCUG00000004640) #9	PTGER3 (ENSOCUG00000004633) #10	ENSOCUG00000027801	CTH (ENSOCUG00000007526) #11	ANKRD13C (ENSOCUG00000002007) #12	ENSOCUG00000002001 #13	LRRC40 (ENSOCUG00000001994) #14	ENSOCUG00000001980 #15	ENSOCUG00000029470 #16	ENSOCUG00000013658 #17	RPE65 (ENSOCUG00000013644) #18	WLS (ENSOCUG00000000532) #19	ENSOCUG00000024881	GNG12 (ENSOCUG00000024324) #20	GADD45A (ENSOCUG00000008954) #21	SERBP1 (ENSOCUG00000008946) #22	IL12RB2 (ENSOCUG00000008934) #23	ENSOCUG00000008927	IL23R (ENSOCUG00000008918) #24	ENSOCUG00000035679	ENSOCUG00000037276	C1orf141 (ENSOCUG00000012268) #25	SLC35D1 (ENSOCUG00000015456) #26	MIER1 (ENSOCUG00000015438) #27	DNAI4 (ENSOCUG00000021747) #28	ENSOCUG00000034617	INSL5 (ENSOCUG00000004666)	DYNLT5 (ENSOCUG00000004662) #29	SGIP1 (ENSOCUG00000027478) #30	PDE4B (ENSOCUG00000006508) #31	ENSOCUG00000027060
Pika	MODERN SPECIES	4611														GNG12 (ENSOPRG00000006444) #20	GADD45A (ENSOPRG00000006440) #21	SERBP1 (ENSOPRG00000006434) #22	IL12RB2 (ENSOPRG00000006419) #23
Rodentia	ANCESTRAL SPECIES		ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Rodentia_B	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00960000186843	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Myomorpha	ANCESTRAL SPECIES	78														ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24
Muroidea	ANCESTRAL SPECIES	74	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24
Muroidea_A	ANCESTRAL SPECIES	4	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000153094.m.b	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135	ENSGT00940000156114	ENSGT00940000162565	ENSGT00960000189758	ENSGT00940000168371	ENSGT00510000048998
Cricetidae	ANCESTRAL SPECIES	3	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000153094.m.b.a.a.a	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135	ENSGT00940000156114	ENSGT00940000162565	ENSGT00960000189758	ENSGT00510000048998	ENSGT00940000156588
Cricetidae_B	ANCESTRAL SPECIES	10	ENSGT00570000079168.b.b.b	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000153395.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000153094.m.b.a.a.a	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135	ENSGT00940000156114	ENSGT00940000162565	ENSGT00960000189758	ENSGT00510000048998	ENSGT00940000156588
Northern American deer mouse	MODERN SPECIES	16	ENSPEMG00000028988	ENSPEMG00000028408	Grid2 (ENSPEMG00000029150)	Atoh1 (ENSPEMG00000001659)	Smarcad1 (ENSPEMG00000001854)	Hpgds (ENSPEMG00000011127)	Qrfprl (ENSPEMG00000019610)	Tnip3 (ENSPEMG00000019457)	Ndnf (ENSPEMG00000010763)	Prdm5 (ENSPEMG00000019722)	4930544G11Rik (ENSPEMG00000022849)	ENSPEMG00000027522	Mad2l1 (ENSPEMG00000021067)	Gng12 (ENSPEMG00000025022) #20	Gadd45a (ENSPEMG00000022414) #21	Serbp1 (ENSPEMG00000021232) #22	Il12rb2 (ENSPEMG00000021493) #23	Il23r (ENSPEMG00000020840) #24	Tacstd2 (ENSPEMG00000003281)	ENSPEMG00000031157	ENSPEMG00000027204	ENSPEMG00000027512	ENSPEMG00000031070	ENSPEMG00000031262	ENSPEMG00000026042	ENSPEMG00000025113	ENSPEMG00000024718	ENSPEMG00000019361	ENSPEMG00000024788	Igkc (ENSPEMG00000030073)	Rpia (ENSPEMG00000010996)
Prairie vole	MODERN SPECIES	353	Maoa (ENSMOCG00000007575)	ENSMOCG00000017653	ENSMOCG00000013942	Atoh1 (ENSMOCG00000007284)	ENSMOCG00000009573	Smarcad1 (ENSMOCG00000017142)	Hpgds (ENSMOCG00000006347)	Qrfprl (ENSMOCG00000012303)	Tnip3 (ENSMOCG00000020430)	Ndnf (ENSMOCG00000013511)	Prdm5 (ENSMOCG00000016267)	Mad2l1 (ENSMOCG00000011109)	ENSMOCG00000019752	Gng12 (ENSMOCG00000017337) #20	Gadd45a (ENSMOCG00000014496) #21	Serbp1 (ENSMOCG00000015573) #22	Il12rb2 (ENSMOCG00000022701) #23	Il23r (ENSMOCG00000010821) #24	Tacstd2 (ENSMOCG00000008197)	Kcns3 (ENSMOCG00000007505)	Rdh14 (ENSMOCG00000005865)	Nt5c1b (ENSMOCG00000020580)	ENSMOCG00000013225	Osr1 (ENSMOCG00000012793)	ENSMOCG00000007598	Ttc32 (ENSMOCG00000021911)	Wdr35 (ENSMOCG00000001393)	Matn3 (ENSMOCG00000013872)	Laptm4a (ENSMOCG00000013181)	ENSMOCG00000012688	Sdc1 (ENSMOCG00000019532)
Cricetinae	ANCESTRAL SPECIES	8	ENSGT00950000183175.B.b	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.j.b	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000153770.s.b.a.b.j	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135	ENSGT00940000156114	ENSGT00940000162565	ENSGT00510000048998	ENSGT00940000156588	ENSGT00940000153203.A.b
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	258	Atoh1 (ENSCGRG00001015957)	Smarcad1 (ENSCGRG00001015056)	Hpgds (ENSCGRG00001011770)	Qrfprl (ENSCGRG00001010782)	Tnip3 (ENSCGRG00001000396)	Ndnf (ENSCGRG00001021230)	Prdm5 (ENSCGRG00001010581)	4930544G11Rik (ENSCGRG00001013500)	Mad2l1 (ENSCGRG00001012165)	ENSCGRG00001015322	ENSCGRG00001015231	ENSCGRG00001011328	ENSCGRG00001015392	Gng12 (ENSCGRG00001009920) #20	GADD45A (ENSCGRG00001022826) #21	ENSCGRG00001016800 #22	ENSCGRG00001022516 #23	Il23r (ENSCGRG00001014663) #24	Tacstd2 (ENSCGRG00001014553)	ENSCGRG00001005025	ENSCGRG00001015659	Nat8 (ENSCGRG00001014825)	ENSCGRG00001021071	ENSCGRG00001014806	Alms1 (ENSCGRG00001012187)	Egr4 (ENSCGRG00001019685)	Fbxo41 (ENSCGRG00001012368)	Cct7 (ENSCGRG00001010276)	Pradc1 (ENSCGRG00001000839)	Smyd5 (ENSCGRG00001020548)	Noto (ENSCGRG00001019719)
Chinese hamster chok1gshd	MODERN SPECIES	188	Acvr2a (ENSCGRG00001024754)	ENSCGRG00001000890	Zeb2 (ENSCGRG00001003812)	ENSCGRG00001006690	Gtdc1 (ENSCGRG00001014426)	ENSCGRG00001008381	Arhgap15 (ENSCGRG00001011371)	Kynu (ENSCGRG00001005556)	ENSCGRG00001012428	ENSCGRG00001009004	ENSCGRG00001024491	Nxph2 (ENSCGRG00001024840)	Spopl (ENSCGRG00001010346)	ENSCGRG00001008614	ENSCGRG00001024843	ENSCGRG00001001542 #22	ENSCGRG00001009248	Tbpl2 (ENSCGRG00001015310)	ENSCGRG00001015320	Il36a (ENSCGRG00001005772)	ENSCGRG00001008839	Il36b (ENSCGRG00001008679)	Il36rn (ENSCGRG00001010036)	Il1f10 (ENSCGRG00001003880)	Il1rn (ENSCGRG00001005108)	Psd4 (ENSCGRG00001010714)	Pax8 (ENSCGRG00001017508)	Cacna1b (ENSCGRG00001018788)	Ehmt1 (ENSCGRG00001002035)	Arrdc1 (ENSCGRG00001003052)	Zmynd19 (ENSCGRG00001007529)
Golden Hamster	MODERN SPECIES	675	Ccser1 (ENSMAUG00000001007)	Grid2 (ENSMAUG00000001680)	Atoh1 (ENSMAUG00000016206)	Smarcad1 (ENSMAUG00000008417)	Hpgds (ENSMAUG00000000292)	ENSMAUG00000001139	Qrfprl (ENSMAUG00000002934)	ENSMAUG00000005208	Tnip3 (ENSMAUG00000007890)	Ndnf (ENSMAUG00000010069)	Prdm5 (ENSMAUG00000006768)	4930544G11Rik (ENSMAUG00000016259)	Mad2l1 (ENSMAUG00000012179)	ENSMAUG00000019235	Gadd45a (ENSMAUG00000013029) #21	Serbp1 (ENSMAUG00000013517) #22	ENSMAUG00000012848 #23	Il23r (ENSMAUG00000014424) #24	Tacstd2 (ENSMAUG00000016395)	ENSMAUG00000016422	ENSMAUG00000014450	ENSMAUG00000016790	ENSMAUG00000017110	ENSMAUG00000016284	Rpia (ENSMAUG00000017330)	Eif2ak3 (ENSMAUG00000000558)	Tex37 (ENSMAUG00000008222)	Foxi3 (ENSMAUG00000010256)	Thnsl2 (ENSMAUG00000000713)	Fabp1 (ENSMAUG00000000101)	ENSMAUG00000000866
Murinae	ANCESTRAL SPECIES	4	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000153094.n	ENSGT00940000163478	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135	ENSGT00940000156114	ENSGT00940000162565	ENSGT00960000189758	ENSGT00940000168371
Mus	ANCESTRAL SPECIES	12	ENSGT01030000234633.C.b	ENSGT00940000153912.B	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00950000186518	ENSGT00950000186487	ENSGT00950000186503	ENSGT00950000186509	ENSGT00950000186538	ENSGT00940000163478	ENSGT00390000004352	ENSGT00940000158121	ENSGT00390000012177	ENSGT00940000162575	ENSGT00940000158503	ENSGT00940000155135
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000155192	ENSGT00940000160064.b	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.b	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d	ENSGT00940000154279.e.b.c.b.b	ENSGT00940000153924.n.d.c.b.b.a	ENSGT00840000130051.c.a.a.a	ENSGT00940000153924.n.d.c.a.b.b.d.a	ENSGT00940000154279.e.a.b	ENSGT00940000153770.s.b.a.a.s	ENSGT00940000163546.f.a.b	ENSGT00950000186518	ENSGT00950000186487	ENSGT00950000186503	ENSGT00950000186509	ENSGT00950000186538
Mus_B	ANCESTRAL SPECIES	20	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.a.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.b	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d
Mouse	MODERN SPECIES	15	Tnip3 (ENSMUSG00000044162)	Ndnf (ENSMUSG00000049001)	Prdm5 (ENSMUSG00000029913)	4930544G11Rik (ENSMUSG00000036463)	Mad2l1 (ENSMUSG00000029910)	Vmn1r32 (ENSMUSG00000062905)	Vmn1r33 (ENSMUSG00000059375)	Vmn1r34 (ENSMUSG00000091012)	Vmn1r35 (ENSMUSG00000060699)	Vmn1r36 (ENSMUSG00000115482)	Vmn1r37 (ENSMUSG00000115467)	Vmn1r38 (ENSMUSG00000115170)	Vmn1r39 (ENSMUSG00000093755)	Gng12 (ENSMUSG00000036402) #20	Gadd45a (ENSMUSG00000036390) #21	Serbp1 (ENSMUSG00000036371) #22	Il12rb2 (ENSMUSG00000018341) #23	Il23r (ENSMUSG00000049093) #24	Tacstd2 (ENSMUSG00000051397)	Igkv2-137 (ENSMUSG00000076501)	Igkv1-135 (ENSMUSG00000096336)	Igkv1-133 (ENSMUSG00000094491)	Igkv1-132 (ENSMUSG00000096580)	Igkv1-131 (ENSMUSG00000076505)	Igkv14-130 (ENSMUSG00000096461)	Igkv9-129 (ENSMUSG00000093906)	Igkv17-127 (ENSMUSG00000076508)	Igkv14-126 (ENSMUSG00000094345)	Igkv11-125 (ENSMUSG00000095737)	Igkv9-124 (ENSMUSG00000096632)	Igkv9-123 (ENSMUSG00000076512)
Mus_C	ANCESTRAL SPECIES	19	ENSGT00910000144252	ENSGT00940000160278	ENSGT01070000253744.a.b	ENSGT00510000046908.a.a.b	ENSGT00390000007586.a.b	ENSGT00940000158340	ENSGT00940000163656	ENSGT00940000153395.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.b	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.a.a.a	ENSGT01030000234553.b.b.d.c.a.o.a.a.a.a.a.a.b.b.a	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000018245.d
spretus	MODERN SPECIES	15	Smarcad1 (MGP_SPRETEiJ_G0029462)	Hpgds (MGP_SPRETEiJ_G0029463)	Qrfprl (MGP_SPRETEiJ_G0029464)	MGP_SPRETEiJ_G0029465	Ndnf (MGP_SPRETEiJ_G0029466)	Prdm5 (MGP_SPRETEiJ_G0029467)	4930544G11Rik (MGP_SPRETEiJ_G0029468)	Mad2l1 (MGP_SPRETEiJ_G0029469)	MGP_SPRETEiJ_G0029470	MGP_SPRETEiJ_G0029471	MGP_SPRETEiJ_G0029472	MGP_SPRETEiJ_G0029473	Vmn1r38 (MGP_SPRETEiJ_G0029474)	Gng12 (MGP_SPRETEiJ_G0029475) #20	Gadd45a (MGP_SPRETEiJ_G0029476) #21	Serbp1 (MGP_SPRETEiJ_G0029477) #22	Il12rb2 (MGP_SPRETEiJ_G0029478) #23	Il23r (MGP_SPRETEiJ_G0029479) #24	Tacstd2 (MGP_SPRETEiJ_G0029480)	Igkv14-130 (MGP_SPRETEiJ_G0000074)	MGP_SPRETEiJ_G0000075	Igkv14-126 (MGP_SPRETEiJ_G0000076)	Igkv14-111 (MGP_SPRETEiJ_G0000077)	Igkv11-125 (MGP_SPRETEiJ_G0000078)	Igkv9-123 (MGP_SPRETEiJ_G0000079)	Igkv2-112 (MGP_SPRETEiJ_G0000080)	Igkv16-104 (MGP_SPRETEiJ_G0000081)	Igkv15-103 (MGP_SPRETEiJ_G0000082)	Igkv20-101-2 (MGP_SPRETEiJ_G0000083)	MGP_SPRETEiJ_G0000030	MGP_SPRETEiJ_G0000084
Steppe mouse	MODERN SPECIES	2536													Gng12 (ENSMSIG00000023111) #20	Gadd45a (ENSMSIG00000023082) #21	ENSMSIG00000023072	Serbp1 (ENSMSIG00000022810) #22	Il12rb2 (ENSMSIG00000022681) #23	ENSMSIG00000022647 #24	Tacstd2 (ENSMSIG00000022639)
Ryukyu mouse	MODERN SPECIES	15	Atoh1 (MGP_CAROLIEiJ_G0028457)	MGP_CAROLIEiJ_G0028458	Hpgds (MGP_CAROLIEiJ_G0028459)	Qrfprl (MGP_CAROLIEiJ_G0028460)	Tnip3 (MGP_CAROLIEiJ_G0028461)	Ndnf (MGP_CAROLIEiJ_G0028462)	Prdm5 (MGP_CAROLIEiJ_G0028463)	4930544G11Rik (MGP_CAROLIEiJ_G0028464)	Mad2l1 (MGP_CAROLIEiJ_G0028465)	Vmn1r32 (MGP_CAROLIEiJ_G0028466)	Vmn1r38 (MGP_CAROLIEiJ_G0028467)	MGP_CAROLIEiJ_G0028468	MGP_CAROLIEiJ_G0028469	Gng12 (MGP_CAROLIEiJ_G0028470) #20	Gadd45a (MGP_CAROLIEiJ_G0028471) #21	Serbp1 (MGP_CAROLIEiJ_G0028472) #22	Il12rb2 (MGP_CAROLIEiJ_G0028473) #23	Il23r (MGP_CAROLIEiJ_G0028474) #24	Tacstd2 (MGP_CAROLIEiJ_G0028475)	MGP_CAROLIEiJ_G0000066	MGP_CAROLIEiJ_G0000067	Igkv11-125 (MGP_CAROLIEiJ_G0000068)	Igkv12-89 (MGP_CAROLIEiJ_G0000069)	Gm42543 (MGP_CAROLIEiJ_G0000070)	MGP_CAROLIEiJ_G0000071	MGP_CAROLIEiJ_G0000072	Igkv5-48 (MGP_CAROLIEiJ_G0000073)	Igkv5-39 (MGP_CAROLIEiJ_G0000074)	MGP_CAROLIEiJ_G0000075	Igkv18-36 (MGP_CAROLIEiJ_G0000076)	Igkv1-35 (MGP_CAROLIEiJ_G0000077)
Shrew mouse	MODERN SPECIES	11	Snca (MGP_PahariEiJ_G0022193)	Mmrn1 (MGP_PahariEiJ_G0022194)	Ccser1 (MGP_PahariEiJ_G0022195)	Grid2 (MGP_PahariEiJ_G0022196)	Atoh1 (MGP_PahariEiJ_G0022197)	Smarcad1 (MGP_PahariEiJ_G0022198)	Hpgds (MGP_PahariEiJ_G0022199)	Qrfprl (MGP_PahariEiJ_G0022200)	MGP_PahariEiJ_G0022201	Ndnf (MGP_PahariEiJ_G0022202)	Prdm5 (MGP_PahariEiJ_G0022203)	4930544G11Rik (MGP_PahariEiJ_G0022204)	Mad2l1 (MGP_PahariEiJ_G0022205)	Gng12 (MGP_PahariEiJ_G0022206) #20	Gadd45a (MGP_PahariEiJ_G0022207) #21	Serbp1 (MGP_PahariEiJ_G0022208) #22	Il12rb2 (MGP_PahariEiJ_G0022209) #23	Il23r (MGP_PahariEiJ_G0022210) #24	Tacstd2 (MGP_PahariEiJ_G0022211)	Igkj1 (MGP_PahariEiJ_G0000020)	Igkj2 (MGP_PahariEiJ_G0000021)	MGP_PahariEiJ_G0000022	Igkj4 (MGP_PahariEiJ_G0000023)	MGP_PahariEiJ_G0000024	Igkc (MGP_PahariEiJ_G0000005)	Rpia (MGP_PahariEiJ_G0022212)	MGP_PahariEiJ_G0022213	Tex37 (MGP_PahariEiJ_G0022214)	Foxi3 (MGP_PahariEiJ_G0022215)	Thnsl2 (MGP_PahariEiJ_G0022216)	Fabp1 (MGP_PahariEiJ_G0022217)
Rat	MODERN SPECIES	14	ENSRNOG00000066686	Grid2 (ENSRNOG00000006174)	Atoh1 (ENSRNOG00000006383)	Smarcad1 (ENSRNOG00000006391)	Hpgds (ENSRNOG00000006583)	Qrfprl (ENSRNOG00000006782)	Tnip3 (ENSRNOG00000064111)	Ndnf (ENSRNOG00000006857)	Prdm5 (ENSRNOG00000023679)	RSA-14-44 (ENSRNOG00000042954)	ENSRNOG00000069727	Mad2l1 (ENSRNOG00000005376)	Vom1r89 (ENSRNOG00000070369)	Gng12 (ENSRNOG00000050231) #20	Gadd45a (ENSRNOG00000005615) #21	Serbp1 (ENSRNOG00000005890) #22	Il12rb2 (ENSRNOG00000007270) #23	Il23r (ENSRNOG00000007544) #24	Tacstd2 (ENSRNOG00000007740)	ENSRNOG00000064041	ENSRNOG00000068649	ENSRNOG00000063859	ENSRNOG00000071049	ENSRNOG00000062475	ENSRNOG00000066643	ENSRNOG00000068441	ENSRNOG00000070169	ENSRNOG00000068221	ENSRNOG00000070192	ENSRNOG00000068648	ENSRNOG00000070412
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	1276	ENSNGAG00000014274	ENSNGAG00000012453	Grid2 (ENSNGAG00000018830)	Atoh1 (ENSNGAG00000017323)	Smarcad1 (ENSNGAG00000000810)	Hpgds (ENSNGAG00000012687)	Qrfprl (ENSNGAG00000010835)	Tnip3 (ENSNGAG00000013422)	Ndnf (ENSNGAG00000012166)	Prdm5 (ENSNGAG00000018317)	ENSNGAG00000020137	Mad2l1 (ENSNGAG00000019258)	ENSNGAG00000011475	Gng12 (ENSNGAG00000004651) #20	Gadd45a (ENSNGAG00000010577) #21	ENSNGAG00000019203 #22	ENSNGAG00000014083 #23	Il23r (ENSNGAG00000017497) #24
Upper Galilee mountains blind mole rat	MODERN SPECIES	1527																ENSNGAG00000012928 #22	ENSNGAG00000007862	Eeig2 (ENSNGAG00000000645)	ENSNGAG00000019065	Henmt1 (ENSNGAG00000016442)	Prpf38b (ENSNGAG00000011476)	Fndc7 (ENSNGAG00000017706)	Stxbp3 (ENSNGAG00000010143)	ENSNGAG00000000145	ENSNGAG00000011912	ENSNGAG00000010890	Wdr47 (ENSNGAG00000019275)	ENSNGAG00000010727	ENSNGAG00000010620	Cfap276 (ENSNGAG00000009506)	Elapor1 (ENSNGAG00000000218)
Lesser Egyptian jerboa	MODERN SPECIES	98	ENSJJAG00000014086	Dmrta2 (ENSJJAG00000021824)	Faf1 (ENSJJAG00000021352)	Cdkn2c (ENSJJAG00000020524)	Alg10b (ENSJJAG00000019582)	Syt10 (ENSJJAG00000019374)	Pkp2 (ENSJJAG00000014586)	Yars2 (ENSJJAG00000000641)	Dnm1l (ENSJJAG00000023169)	ENSJJAG00000013851	Fgd4 (ENSJJAG00000018423)	Gng12 (ENSJJAG00000017730) #20	Gadd45a (ENSJJAG00000016764) #21	ENSJJAG00000016243	ENSJJAG00000016153	Serbp1 (ENSJJAG00000023871) #22	Il12rb2 (ENSJJAG00000019502) #23	Tacstd2 (ENSJJAG00000014125)	Mysm1 (ENSJJAG00000016612)	ENSJJAG00000016007	Jun (ENSJJAG00000001078)	ENSJJAG00000022820	Fggy (ENSJJAG00000021024)	Hook1 (ENSJJAG00000017805)	ENSJJAG00000016631	ENSJJAG00000016230	ENSJJAG00000016141	ENSJJAG00000013782	Nfia (ENSJJAG00000012495)	ENSJJAG00000010329	Tm2d1 (ENSJJAG00000008343)
Kangaroo rat	MODERN SPECIES	370	ENSDORG00000027114	ENSDORG00000024342	Negr1 (ENSDORG00000007902) #8	Zranb2 (ENSDORG00000016348) #9	Ptger3 (ENSDORG00000016347) #10	Cth (ENSDORG00000009184) #11	Ankrd13c (ENSDORG00000000672) #12	Srsf11 (ENSDORG00000000669) #13	Lrrc40 (ENSDORG00000000667) #14	Lrrc7 (ENSDORG00000000664) #16	Rpe65 (ENSDORG00000004476) #18	Wls (ENSDORG00000007449) #19	Gng12 (ENSDORG00000027722) #20	Gadd45a (ENSDORG00000011668) #21	ENSDORG00000023240	Serbp1 (ENSDORG00000002189) #22	Slc35d1 (ENSDORG00000002120) #26	Mier1 (ENSDORG00000002114) #27	Sgip1 (ENSDORG00000001885) #30	Pde4b (ENSDORG00000010712) #31	Leprot (ENSDORG00000005691) #33	Dnajc6 (ENSDORG00000005685) #34	Ak4 (ENSDORG00000023966) #35	Jak1 (ENSDORG00000013462) #37	Raver2 (ENSDORG00000002498)	Cachd1 (ENSDORG00000011104)	Ror1 (ENSDORG00000014715)	Pgm1 (ENSDORG00000006501)	Efcab7 (ENSDORG00000013731)	Alg6 (ENSDORG00000013729)	Atg4c (ENSDORG00000027209)
Rodentia_A	ANCESTRAL SPECIES		ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Hystricomorpha	ANCESTRAL SPECIES	44	ENSGT00780000122095	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Hystricomorpha_a	ANCESTRAL SPECIES	14	ENSGT00780000122095	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Hystricomorpha_b	DUPLICATION
Hystricomorpha_b	ANCESTRAL SPECIES																	ENSGT00520000055591.a.bb #22
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	98	NEGR1 (ENSODEG00000005896) #8	ENSODEG00000006491 #9	PTGER3 (ENSODEG00000005473) #10	CTH (ENSODEG00000006417) #11	ANKRD13C (ENSODEG00000005392) #12	SRSF11 (ENSODEG00000006289) #13	LRRC40 (ENSODEG00000005601) #14	LRRC7 (ENSODEG00000006670) #16	ENSODEG00000005510	DEPDC1 (ENSODEG00000005384) #17	RPE65 (ENSODEG00000005046) #18	WLS (ENSODEG00000006216) #19	GNG12 (ENSODEG00000005519) #20	GADD45A (ENSODEG00000007377) #21	ENSODEG00000005146	ENSODEG00000006835 #22	ENSODEG00000006396	SLC35D1 (ENSODEG00000005492) #26	ENSODEG00000004802 #27	DNAI4 (ENSODEG00000005891) #28	ENSODEG00000005348	DYNLT5 (ENSODEG00000006520) #29	SGIP1 (ENSODEG00000005002) #30	ENSODEG00000005863	PDE4B (ENSODEG00000004887) #31	LEPR (ENSODEG00000005568) #32	ENSODEG00000019195	LEPROT (ENSODEG00000006321) #33	ENSODEG00000006173 #34	ENSODEG00000006986	ENSODEG00000006541 #35
Degu	MODERN SPECIES	160	RIPOR2 (ENSODEG00000013706)	GMNN (ENSODEG00000015221)	C6orf62 (ENSODEG00000014107)	ENSODEG00000015001	TDP2 (ENSODEG00000014018)	ENSODEG00000013792	ALDH5A1 (ENSODEG00000014169)	ENSODEG00000014139	ENSODEG00000014365	MRS2 (ENSODEG00000013755)	DCDC2 (ENSODEG00000014362)	ENSODEG00000020139	NRSN1 (ENSODEG00000014353)	ENSODEG00000014552	PRL (ENSODEG00000014667)	ENSODEG00000015433 #22	ENSODEG00000014569	SOX4 (ENSODEG00000014118)	ENSODEG00000016012	ENSODEG00000014548	ENSODEG00000015137	E2F3 (ENSODEG00000014766)	MBOAT1 (ENSODEG00000013888)	ID4 (ENSODEG00000013997)
Degu	MODERN SPECIES	122	ENSODEG00000005535	ADGRG7 (ENSODEG00000005676)	TMEM45A (ENSODEG00000005098)	ENSODEG00000006299	ENSODEG00000019267	ENSODEG00000005682	LNP1 (ENSODEG00000005232)	ENSODEG00000007594	TOMM70 (ENSODEG00000005476)	ENSODEG00000005041	TBC1D23 (ENSODEG00000005180)	ENSODEG00000006664	FILIP1L (ENSODEG00000006295)	ENSODEG00000005226	COL8A1 (ENSODEG00000004998)	ENSODEG00000006867 #22	DCBLD2 (ENSODEG00000005751)	ENSODEG00000005393	ENSODEG00000019181	ENSODEG00000019164	ENSODEG00000005746	CPOX (ENSODEG00000004750)	GPR15 (ENSODEG00000019236)	ENSODEG00000005283	ENSODEG00000005152	ENSODEG00000019229	NPSR1 (ENSODEG00000005018)	ENSODEG00000005414	ENSODEG00000004808	ENSODEG00000005165	ENSODEG00000004827
Hystricomorpha_b	ANCESTRAL SPECIES	6	ENSGT00780000122095	ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a.cb #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT01030000235815	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Long-tailed chinchilla	MODERN SPECIES	130	FPGT (ENSCLAG00000005973)	LRRIQ3 (ENSCLAG00000006032)	NEGR1 (ENSCLAG00000007364) #8	ZRANB2 (ENSCLAG00000004404) #9	PTGER3 (ENSCLAG00000005105) #10	CTH (ENSCLAG00000005393) #11	ANKRD13C (ENSCLAG00000011373) #12	SRSF11 (ENSCLAG00000013309) #13	LRRC40 (ENSCLAG00000014047) #14	LRRC7 (ENSCLAG00000008949) #16	DEPDC1 (ENSCLAG00000006344) #17	RPE65 (ENSCLAG00000006679) #18	WLS (ENSCLAG00000006873) #19	GNG12 (ENSCLAG00000007040) #20	GADD45A (ENSCLAG00000007279) #21	SERBP1 (ENSCLAG00000007459) #22	ENSCLAG00000008496 #23	IL23R (ENSCLAG00000008594) #24	ENSCLAG00000005867 #25	SLC35D1 (ENSCLAG00000006519) #26	MIER1 (ENSCLAG00000006851) #27	ENSCLAG00000007749 #28	ENSCLAG00000004621	ENSCLAG00000004647	SGIP1 (ENSCLAG00000005269) #30	PDE4B (ENSCLAG00000006409) #31	LEPR (ENSCLAG00000016236) #32	LEPROT (ENSCLAG00000008136) #33	DNAJC6 (ENSCLAG00000008413) #34	ENSCLAG00000005491 #35	JAK1 (ENSCLAG00000006227) #37
Degu	MODERN SPECIES	179																ENSODEG00000003498 #22	ENSODEG00000003509	LCN2 (ENSODEG00000003527)	PTGES2 (ENSODEG00000003544)	SLC25A25 (ENSODEG00000003576)	ENSODEG00000018972	NAIF1 (ENSODEG00000003624)	EEIG1 (ENSODEG00000003648)	DPM2 (ENSODEG00000003688)	PIP5KL1 (ENSODEG00000003703)	ST6GALNAC4 (ENSODEG00000003727)	ENSODEG00000003757	AK1 (ENSODEG00000003768)	ENG (ENSODEG00000003811)	FPGS (ENSODEG00000003915)	CDK9 (ENSODEG00000003962)
Guinea pig	MODERN SPECIES	2	ENSCPOG00000012014	NEGR1 (ENSCPOG00000004501) #8	ZRANB2 (ENSCPOG00000007829) #9	PTGER3 (ENSCPOG00000002783) #10	CTH (ENSCPOG00000020205) #11	ANKRD13C (ENSCPOG00000009559) #12	SRSF11 (ENSCPOG00000009554) #13	LRRC40 (ENSCPOG00000009536) #14	LRRC7 (ENSCPOG00000009529) #16	ENSCPOG00000024331	DEPDC1 (ENSCPOG00000013839) #17	RPE65 (ENSCPOG00000013831) #18	WLS (ENSCPOG00000012423) #19	GNG12 (ENSCPOG00000036301) #20	GADD45A (ENSCPOG00000005810) #21	SERBP1 (ENSCPOG00000020069) #22	ENSCPOG00000027017 #25	SLC35D1 (ENSCPOG00000030853) #26	MIER1 (ENSCPOG00000014165) #27	ENSCPOG00000014157 #28	INSL5 (ENSCPOG00000011735)	DYNLT5 (ENSCPOG00000014156) #29	SGIP1 (ENSCPOG00000012044) #30	PDE4B (ENSCPOG00000011698) #31	LEPR (ENSCPOG00000015030) #32	LEPROT (ENSCPOG00000033712) #33	DNAJC6 (ENSCPOG00000008733) #34	ENSCPOG00000037978 #35	JAK1 (ENSCPOG00000005991) #37	RAVER2 (ENSCPOG00000005986)	CACHD1 (ENSCPOG00000011700)
Sciuridae	ANCESTRAL SPECIES	3	ENSGT00940000159289 #8	ENSGT00730000111078 #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT01010000228719	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Marmotini	ANCESTRAL SPECIES		ENSGT00390000004404	ENSGT00940000159289 #8	ENSGT00730000111078.w.a #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32	ENSGT00390000006503.a #33	ENSGT00940000158755 #34	ENSGT00940000154568 #35	ENSGT00940000157092 #37
Marmotini_b	ANCESTRAL SPECIES	105	ENSGT00940000159289 #8	ENSGT00730000111078.w.a #9	ENSGT01030000234559.b #10	ENSGT00390000000312 #11	ENSGT00940000154222.d.b.d.b.n	ENSGT00950000182928.B.d.b #12	ENSGT00730000110872.b #13	ENSGT00940000156968 #14	ENSGT00940000156262 #16	ENSGT00950000182976.b.a #17	ENSGT00950000182913.B #18	ENSGT00390000005897 #19	ENSGT00940000164094	ENSGT01100000263497.E.b #20	ENSGT00950000182964.a.a #21	ENSGT00520000055591.a #22	ENSGT00940000159829 #23	ENSGT00530000064198 #24	ENSGT00390000010146 #25	ENSGT00940000155665.j #26	ENSGT01030000234573.A.b.a #27	ENSGT00940000156209 #28	ENSGT00940000154396.b.b	ENSGT00940000160185 #29	ENSGT00940000156301 #30	ENSGT00940000155190 #31	ENSGT00730000111209 #32
Squirrel	MODERN SPECIES	191	ENSSTOG00000000890 #9	PTGER3 (ENSSTOG00000000886) #10	CTH (ENSSTOG00000000202) #11	ENSSTOG00000034931	ENSSTOG00000032029	ANKRD13C (ENSSTOG00000008687) #12	SRSF11 (ENSSTOG00000008675) #13	LRRC40 (ENSSTOG00000008649) #14	LRRC7 (ENSSTOG00000008618) #16	ENSSTOG00000032513	DEPDC1 (ENSSTOG00000001673) #17	RPE65 (ENSSTOG00000001659) #18	WLS (ENSSTOG00000008145) #19	GNG12 (ENSSTOG00000004502) #20	GADD45A (ENSSTOG00000024503) #21	SERBP1 (ENSSTOG00000026587) #22	ENSSTOG00000016126 #23	IL23R (ENSSTOG00000005238) #24	SLC35D1 (ENSSTOG00000010086) #26	MIER1 (ENSSTOG00000011394) #27	ENSSTOG00000011383 #28	ENSSTOG00000031556	INSL5 (ENSSTOG00000016330)	ENSSTOG00000016329	SGIP1 (ENSSTOG00000016322) #30	PDE4B (ENSSTOG00000028938) #31	LEPR (ENSSTOG00000022005) #32
Arctic ground squirrel	MODERN SPECIES	14	ZRANB2 (ENSUPAG00010014577) #9	ENSUPAG00010014568 #10	ENSUPAG00010014565	CTH (ENSUPAG00010014528) #11	ENSUPAG00010014512	ANKRD13C (ENSUPAG00010014475) #12	SRSF11 (ENSUPAG00010014456) #13	LRRC40 (ENSUPAG00010014436) #14	LRRC7 (ENSUPAG00010014242) #16	DEPDC1 (ENSUPAG00010014188) #17	RPE65 (ENSUPAG00010014157) #18	WLS (ENSUPAG00010014142) #19	ENSUPAG00010014133	GNG12 (ENSUPAG00010014121) #20	GADD45A (ENSUPAG00010014109) #21	SERBP1 (ENSUPAG00010013929) #22	IL12RB2 (ENSUPAG00010013900) #23	IL23R (ENSUPAG00010013875) #24	ENSUPAG00010013858 #25	SLC35D1 (ENSUPAG00010013821) #26	MIER1 (ENSUPAG00010013780) #27	ENSUPAG00010013759 #28	ENSUPAG00010013745 #28	INSL5 (ENSUPAG00010013736)	DYNLT5 (ENSUPAG00010013722) #29	SGIP1 (ENSUPAG00010013307) #30	PDE4B (ENSUPAG00010013188) #31
Alpin marmot	MODERN SPECIES	27	PTGER3 (ENSMMMG00000000262) #10	ENSMMMG00000000250	ENSMMMG00000000236	ENSMMMG00000000219	CTH (ENSMMMG00000000175) #11	ANKRD13C (ENSMMMG00000000111) #12	SRSF11 (ENSMMMG00000018369) #13	LRRC40 (ENSMMMG00000018339) #14	LRRC7 (ENSMMMG00000018169) #16	DEPDC1 (ENSMMMG00000018082) #17	RPE65 (ENSMMMG00000018066) #18	WLS (ENSMMMG00000018053) #19	DIRAS3 (ENSMMMG00000018034)	GNG12 (ENSMMMG00000018008) #20	GADD45A (ENSMMMG00000017997) #21	SERBP1 (ENSMMMG00000017849) #22	ENSMMMG00000017835	PTGER4 (ENSMMMG00000017826)	TTC33 (ENSMMMG00000017819)	PRKAA1 (ENSMMMG00000017787)	RPL37 (ENSMMMG00000017779)	CARD6 (ENSMMMG00000017776)	C7 (ENSMMMG00000017398)	ENSMMMG00000017396	MROH2B (ENSMMMG00000017369)	C6 (ENSMMMG00000017358)	PLCXD3 (ENSMMMG00000017352)	ENSMMMG00000017300	RIMOC1 (ENSMMMG00000017296)	FBXO4 (ENSMMMG00000017291)	GHR (ENSMMMG00000017240)
Eurasian red squirrel	MODERN SPECIES		ENSSVLG00005017607	ENSSVLG00005017591	CTH (ENSSVLG00005017161) #11	ENSSVLG00005017080	ANKRD13C (ENSSVLG00005016963) #12	SRSF11 (ENSSVLG00005016775) #13	ENSSVLG00005016746	ENSSVLG00005016639 #14	LRRC7 (ENSSVLG00005016053) #16	DEPDC1 (ENSSVLG00005015797) #17	RPE65 (ENSSVLG00005015624) #18	WLS (ENSSVLG00005015479) #19	DIRAS3 (ENSSVLG00005015456)	GNG12 (ENSSVLG00005015424) #20	GADD45A (ENSSVLG00005015298) #21	SERBP1 (ENSSVLG00005015184) #22	IL12RB2 (ENSSVLG00005014564) #23	IL23R (ENSSVLG00005014294) #24	ENSSVLG00005014261	C1orf141 (ENSSVLG00005014047) #25	ENSSVLG00005013884	ENSSVLG00005013815 #26	ENSSVLG00005013677 #27	DNAI4 (ENSSVLG00005013339) #28	INSL5 (ENSSVLG00005013170)	DYNLT5 (ENSSVLG00005013092) #29	SGIP1 (ENSSVLG00005012998) #30	PDE4B (ENSSVLG00005012364) #31	LEPR (ENSSVLG00005011511) #32	ENSSVLG00005011368	ENSSVLG00005011213 #33