Mammalia	ANCESTRAL SPECIES	46	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.a.a.a ##34	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000161969	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802 #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00940000165180
Theria	ANCESTRAL SPECIES	46	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00390000016224.j.a	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000161969	ENSGT00940000154471.a.a	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802 #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a
Eutheria	ANCESTRAL SPECIES	16	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j
Boreoeutheria	ANCESTRAL SPECIES	11	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Euarchontoglires	ANCESTRAL SPECIES	11	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Primates	ANCESTRAL SPECIES	23	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Haplorrhini	ANCESTRAL SPECIES	33	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Simiiformes	ANCESTRAL SPECIES	9	ENSGT00410000025802.h.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b
Catarrhini	ANCESTRAL SPECIES	12	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a.m #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000003897.s.b.a.a.b.e.a #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b
Cercopithecidae	ANCESTRAL SPECIES	19															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b
Cercopithecinae	ANCESTRAL SPECIES	13															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	11	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.m #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00910000147580	ENSGT00530000063808.a	ENSGT00390000002566
Cercopithecinae_b	ANCESTRAL SPECIES	51	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.m #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00910000147580	ENSGT00530000063808.a	ENSGT00390000002566	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b
Olive baboon	MODERN SPECIES	792	VAMP7 (ENSPANG00000015780) #7	VBP1 (ENSPANG00000029954) #8	CLIC2 (ENSPANG00000008414) #9	TMLHE (ENSPANG00000024415) #10	RAB39B (ENSPANG00000008960) #11	BRCC3 (ENSPANG00000010904) #12	MTCP1 (ENSPANG00000012244) #13	CMC4 (ENSPANG00000017783) #14	FUNDC2 (ENSPANG00000004381) #15	F8 (ENSPANG00000010602) #16	GAB3 (ENSPANG00000004006) #17	DKC1 (ENSPANG00000011978) #18	MPP1 (ENSPANG00000013144) #19	SMIM9 (ENSPANG00000014914) #20	ENSPANG00000046902 #21	FLNA (ENSPANG00000025614) #22	RPL10 (ENSPANG00000008309) #23	DNASE1L1 (ENSPANG00000026075) #24	TAFAZZIN (ENSPANG00000023866) #25	ATP6AP1 (ENSPANG00000012092) #26	GDI1 (ENSPANG00000023322) #27	PLXNA3 (ENSPANG00000022718) #28	LAGE3 (ENSPANG00000021408) #29	UBL4A (ENSPANG00000010838) #30	SLC10A3 (ENSPANG00000014876) #31	TKTL1 (ENSPANG00000011938) #32	TEX28 (ENSPANG00000041590) #33	OPN1LW (ENSPANG00000011135) #34	MECP2 (ENSPANG00000011691) #35	IRAK1 (ENSPANG00000015781) #36	TMEM187 (ENSPANG00000050796) #37
Cercopithecinae_d	ANCESTRAL SPECIES	141															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Sooty mangabey	MODERN SPECIES	286															EMD (ENSCATG00000030421)	FLNA (ENSCATG00000041295) #22	TKTL1 (ENSCATG00000033495) #32	TEX28 (ENSCATG00000040472) #33	ENSCATG00000040717 #34	MECP2 (ENSCATG00000017038) #35	ENSCATG00000018741	ENSCATG00000020302	IRAK1 (ENSCATG00000044264) #36	HCFC1 (ENSCATG00000022004)	RENBP (ENSCATG00000037009)	NAA10 (ENSCATG00000038709)	ARHGAP4 (ENSCATG00000042499)	AVPR2 (ENSCATG00000036647)	L1CAM (ENSCATG00000041515)	PDZD4 (ENSCATG00000043997)	SSR4 (ENSCATG00000006344)
Drill	MODERN SPECIES	1411															EMD (ENSMLEG00000038835)	FLNA (ENSMLEG00000037979) #22	TKTL1 (ENSMLEG00000031544) #32	ENSMLEG00000035487 #33	ENSMLEG00000028186 #33	ENSMLEG00000033448 #34	MECP2 (ENSMLEG00000032763) #35	ENSMLEG00000027410	ENSMLEG00000009357	IRAK1 (ENSMLEG00000029062) #36	HCFC1 (ENSMLEG00000042451)	RENBP (ENSMLEG00000038487)	NAA10 (ENSMLEG00000032424)	ARHGAP4 (ENSMLEG00000038659)	AVPR2 (ENSMLEG00000042889)	L1CAM (ENSMLEG00000036326)	PDZD4 (ENSMLEG00000004595)
Macaca	ANCESTRAL SPECIES	13	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.m #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000002566	ENSGT00410000025802.h.a.a ##29
Macaca_a	ANCESTRAL SPECIES	11	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.m #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.b.b.b	ENSGT00530000063808.a	ENSGT00410000025802.h.a.a ##29
Rhesus	MODERN SPECIES	327	L1CAM (ENSMMUG00000003379)	AVPR2 (ENSMMUG00000064945)	ARHGAP4 (ENSMMUG00000000323)	NAA10 (ENSMMUG00000000322)	RENBP (ENSMMUG00000000320)	HCFC1 (ENSMMUG00000000319)	TMEM187 (ENSMMUG00000005132) #37	IRAK1 (ENSMMUG00000018703) #36	MECP2 (ENSMMUG00000018704) #35	ENSMMUG00000006166 #34	ENSMMUG00000055487 #33	ENSMMUG00000054361 #34	ENSMMUG00000050314 #33	TKTL1 (ENSMMUG00000013667) #32	EMD (ENSMMUG00000013678)	FLNA (ENSMMUG00000013668) #22	RPL10 (ENSMMUG00000005494) ##23	DNASE1L1 (ENSMMUG00000050873) #24	TAFAZZIN (ENSMMUG00000005498) #25	ATP6AP1 (ENSMMUG00000005501) #26	GDI1 (ENSMMUG00000005502) #27	FAM50A (ENSMMUG00000005505)	PLXNA3 (ENSMMUG00000005507) #28	LAGE3 (ENSMMUG00000040340) #29	UBL4A (ENSMMUG00000009015) #31	ENSMMUG00000063935	FAM3A (ENSMMUG00000009012)	G6PD (ENSMMUG00000017409)	ENSMMUG00000052573 ##29	ENSMMUG00000017405 ##29	ENSMMUG00000051483
Crab-eating macaque	MODERN SPECIES	175	PDZD4 (ENSMFAG00000031705)	L1CAM (ENSMFAG00000030653)	AVPR2 (ENSMFAG00000043716)	ARHGAP4 (ENSMFAG00000038733)	NAA10 (ENSMFAG00000044161)	RENBP (ENSMFAG00000044051)	HCFC1 (ENSMFAG00000035763)	IRAK1 (ENSMFAG00000042818) #36	MECP2 (ENSMFAG00000033178) #35	ENSMFAG00000049901	ENSMFAG00000043960 #34	ENSMFAG00000039596 #33	ENSMFAG00000059786 #33	TKTL1 (ENSMFAG00000031072) #32	EMD (ENSMFAG00000045316)	FLNA (ENSMFAG00000035790) #22	ENSMFAG00000040824 #23	DNASE1L1 (ENSMFAG00000038787) #24	TAFAZZIN (ENSMFAG00000028691) #25	ATP6AP1 (ENSMFAG00000003619) #26	GDI1 (ENSMFAG00000037198) #27	FAM50A (ENSMFAG00000021581)	PLXNA3 (ENSMFAG00000040837) #28	LAGE3 (ENSMFAG00000004038) #29	UBL4A (ENSMFAG00000000884) #30	SLC10A3 (ENSMFAG00000035989) #31	FAM3A (ENSMFAG00000041814)	G6PD (ENSMFAG00000043207)	IKBKG (ENSMFAG00000032230)	ENSMFAG00000060522	F8 (ENSMFAG00000039948) #21
Pig-tailed macaque	MODERN SPECIES	403													TEX28 (ENSMNEG00000032132) #33	TKTL1 (ENSMNEG00000045070) #32	EMD (ENSMNEG00000042917)	FLNA (ENSMNEG00000040468) #22	ENSMNEG00000038094 ##23	DNASE1L1 (ENSMNEG00000032874) #24	TAFAZZIN (ENSMNEG00000038446) #25	ATP6AP1 (ENSMNEG00000040534) #26	GDI1 (ENSMNEG00000029142) #27	FAM50A (ENSMNEG00000033378)	PLXNA3 (ENSMNEG00000029520) #28	LAGE3 (ENSMNEG00000044542) #29	UBL4A (ENSMNEG00000039513) #30	SLC10A3 (ENSMNEG00000042913) #31	FAM3A (ENSMNEG00000034258)	G6PD (ENSMNEG00000031229)
Vervet Monkey	MODERN SPECIES	203	ENSCSAG00000000521	F8 (ENSCSAG00000006668) #21	SMIM9 (ENSCSAG00000006693) #20	MPP1 (ENSCSAG00000006698) #19	DKC1 (ENSCSAG00000006706) #18	GAB3 (ENSCSAG00000006717) #17	ENSCSAG00000006721 ##29	IKBKG (ENSCSAG00000006727)	G6PD (ENSCSAG00000006732)	FAM3A (ENSCSAG00000006738)	SLC10A3 (ENSCSAG00000000522) #31	UBL4A (ENSCSAG00000006742) #30	ENSCSAG00000006746	PLXNA3 (ENSCSAG00000006756) #28	EMD (ENSCSAG00000006760)	FLNA (ENSCSAG00000006772) #22	TKTL1 (ENSCSAG00000006779) #32	TEX28 (ENSCSAG00000006786) #33	ENSCSAG00000006792 #34	MECP2 (ENSCSAG00000006798) #35	IRAK1 (ENSCSAG00000006804) #36	TMEM187 (ENSCSAG00000000523) #37	HCFC1 (ENSCSAG00000006809)	RENBP (ENSCSAG00000006814)	NAA10 (ENSCSAG00000006823)	ARHGAP4 (ENSCSAG00000006854)	AVPR2 (ENSCSAG00000006857)	L1CAM (ENSCSAG00000006864)	PDZD4 (ENSCSAG00000006871)	SSR4 (ENSCSAG00000006874)	IDH3G (ENSCSAG00000006879)
Rhinopithecus	ANCESTRAL SPECIES	825														ENSGT00940000155223.b	ENSGT00390000002034.b	ENSGT00940000153588.b #22
Golden snub-nosed monkey	MODERN SPECIES	1184															ENSRROG00000030056	FLNA (ENSRROG00000041445) #22
Black snub-nosed monkey	MODERN SPECIES	1888															ENSRBIG00000037040	ENSRBIG00000039019 #22	ENSRBIG00000042996 ##23	DNASE1L1 (ENSRBIG00000030074) #24	TAFAZZIN (ENSRBIG00000035066) #25	ATP6AP1 (ENSRBIG00000036700) #26	GDI1 (ENSRBIG00000042799) #27	FAM50A (ENSRBIG00000037965)	PLXNA3 (ENSRBIG00000035203) #28	ENSRBIG00000034128	UBL4A (ENSRBIG00000023877) #30	SLC10A3 (ENSRBIG00000034698) #31	FAM3A (ENSRBIG00000025198)	ENSRBIG00000028634	G6PD (ENSRBIG00000030157)	ENSRBIG00000029055	IKBKG (ENSRBIG00000031684)
Hominoidea	ANCESTRAL SPECIES	29	ENSGT00390000002566	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a.m #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.e.a #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000167437	ENSGT00940000157506
Gibbon	MODERN SPECIES	449	GAB3 (ENSNLEG00000014318) #17	ENSNLEG00000014311	ENSNLEG00000014300	FAM3A (ENSNLEG00000030950)	SLC10A3 (ENSNLEG00000014293) #31	ENSNLEG00000014292 #30	LAGE3 (ENSNLEG00000028687) #29	PLXNA3 (ENSNLEG00000014273) #28	FAM50A (ENSNLEG00000014266)	GDI1 (ENSNLEG00000014222) #27	ATP6AP1 (ENSNLEG00000014184) #26	ENSNLEG00000014176 #25	DNASE1L1 (ENSNLEG00000014149) #24	ENSNLEG00000028143 #23	EMD (ENSNLEG00000014117)	FLNA (ENSNLEG00000013842) #22	TKTL1 (ENSNLEG00000013813) #32	TEX28 (ENSNLEG00000013808) #33	ENSNLEG00000013787 #34	ENSNLEG00000013783 #35	ENSNLEG00000013767 #36	TMEM187 (ENSNLEG00000013763) #37	HCFC1 (ENSNLEG00000026624)	ENSNLEG00000013753	NAA10 (ENSNLEG00000013724)	ARHGAP4 (ENSNLEG00000013678)	AVPR2 (ENSNLEG00000013671)	ENSNLEG00000031864	L1CAM (ENSNLEG00000013647)	ENSNLEG00000034251	PDZD4 (ENSNLEG00000013626)
Hominidae	ANCESTRAL SPECIES	8	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a.m #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b.f #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000167437	ENSGT00940000157506
Orangutan	MODERN SPECIES	242	ENSPPYG00000020888 ##29	ENSPPYG00000020887	IKBKG (ENSPPYG00000020886)	G6PD (ENSPPYG00000020885)	FAM3A (ENSPPYG00000020884)	SLC10A3 (ENSPPYG00000020883) #31	UBL4A (ENSPPYG00000020882) #30	LAGE3 (ENSPPYG00000033247) #29	FAM50A (ENSPPYG00000020879)	GDI1 (ENSPPYG00000020878) #27	ATP6AP1 (ENSPPYG00000020877) #26	TAFAZZIN (ENSPPYG00000020876) #25	DNASE1L1 (ENSPPYG00000020875) #24	RPL10 (ENSPPYG00000020874) ##23	EMD (ENSPPYG00000020873)	FLNA (ENSPPYG00000020871) #22	TKTL1 (ENSPPYG00000020870) #32	TEX28 (ENSPPYG00000020869) #33	ENSPPYG00000020867 #34	MECP2 (ENSPPYG00000020866) #35	IRAK1 (ENSPPYG00000020865) #36	TMEM187 (ENSPPYG00000020864) #37	HCFC1 (ENSPPYG00000020863)	RENBP (ENSPPYG00000020862)	NAA10 (ENSPPYG00000020861)	ARHGAP4 (ENSPPYG00000020860)	ENSPPYG00000020859	L1CAM (ENSPPYG00000020858)	ENSPPYG00000031511	PDZD4 (ENSPPYG00000020857)	SSR4 (ENSPPYG00000020856)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	9	ENSGT00530000063435.a.i	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a.m #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00530000063687.b.b.b.f #35	ENSGT00390000003897.s.b.a.a.b.e.a #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b.f #34	ENSGT00530000063687.b.b.b.e #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000167437.b	ENSGT00940000157506
Gorilla	MODERN SPECIES	523	ENSGGOG00000025927	IKBKG (ENSGGOG00000004896)	G6PD (ENSGGOG00000004890)	ENSGGOG00000005270	SLC10A3 (ENSGGOG00000013520) #31	ENSGGOG00000013509 #30	LAGE3 (ENSGGOG00000013507) #29	PLXNA3 (ENSGGOG00000013493) #28	ENSGGOG00000013484	GDI1 (ENSGGOG00000013474) #27	ATP6AP1 (ENSGGOG00000013466) #26	TAZ (ENSGGOG00000011947) #25	DNASE1L1 (ENSGGOG00000000132) #24	ENSGGOG00000000131 #23	EMD (ENSGGOG00000009388)	FLNA (ENSGGOG00000004199) #22	TKTL1 (ENSGGOG00000004191) #32	TEX28 (ENSGGOG00000004188) #33	ENSGGOG00000004184 #34	MECP2 (ENSGGOG00000042467) #35	ENSGGOG00000041822	ENSGGOG00000040298	IRAK1 (ENSGGOG00000000220) #36	TMEM187 (ENSGGOG00000008146) #37	HCFC1 (ENSGGOG00000009800)	RENBP (ENSGGOG00000009791)	NAA10 (ENSGGOG00000009788)	ARHGAP4 (ENSGGOG00000009770)	AVPR2 (ENSGGOG00000027387)	PDZD4 (ENSGGOG00000007937)	SSR4 (ENSGGOG00000024329)
Homo/Pan group	ANCESTRAL SPECIES	9	ENSGT00530000063435.a.i	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a.m #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00530000063687.b.b.b.f #35	ENSGT00390000003897.s.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b.f #34	ENSGT00530000063687.b.b.b.e #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000167437.b	ENSGT00940000157506
Human	MODERN SPECIES	1827	CTAG1A (ENSG00000268651) ##29	IKBKG (ENSG00000269335)	G6PD (ENSG00000160211)	FAM3A (ENSG00000071889)	SLC10A3 (ENSG00000126903) #31	UBL4A (ENSG00000102178) #30	LAGE3 (ENSG00000196976) #29	PLXNA3 (ENSG00000130827) #28	FAM50A (ENSG00000071859)	GDI1 (ENSG00000203879) #27	ATP6AP1 (ENSG00000071553) #26	TAFAZZIN (ENSG00000102125) #25	DNASE1L1 (ENSG00000013563) #24	RPL10 (ENSG00000147403) ##23	EMD (ENSG00000102119)	FLNA (ENSG00000196924) #22	TKTL1 (ENSG00000007350) #32	TEX28 (ENSG00000278057) #33	OPN1MW3 (ENSG00000269433) #34	OPN1MW2 (ENSG00000166160) #34	OPN1MW (ENSG00000268221) #34	OPN1LW (ENSG00000102076) #34	MECP2 (ENSG00000169057) #35	IRAK1 (ENSG00000184216) #36	TMEM187 (ENSG00000177854) #37	HCFC1 (ENSG00000172534)	RENBP (ENSG00000102032)	NAA10 (ENSG00000102030)	ARHGAP4 (ENSG00000089820)	AVPR2 (ENSG00000126895)	L1CAM (ENSG00000198910)
Pan	ANCESTRAL SPECIES	6	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00910000146917	ENSGT00910000147052	ENSGT00530000063687.b.b.b.f #35	ENSGT00390000003897.s.b.a.a.b.f ##23	ENSGT00530000063687.b.b.b.e #35	ENSGT01030000234549.a.a.a.b.f #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22
Bonobo	MODERN SPECIES	299														ENSPPAG00000027923 #32	EMD (ENSPPAG00000027507)	ENSPPAG00000016208 #22
Chimpanzee	MODERN SPECIES	361															EMD (ENSPTRG00000049057)	FLNA (ENSPTRG00000047682) #22
Platyrrhini	ANCESTRAL SPECIES	42	ENSGT00410000025802.h.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b.n ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426.a #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	233															EMD (ENSANAG00000027129)	ENSANAG00000029089 #22
Mas night monkey	MODERN SPECIES	1312															TKTL1 (ENSANAG00000030105) #32	ENSANAG00000030933 #22	ENSANAG00000034691 #34	MECP2 (ENSANAG00000019603) #35	ENSANAG00000019708	IRAK1 (ENSANAG00000030752) #36	HCFC1 (ENSANAG00000030898)	RENBP (ENSANAG00000034421)	NAA10 (ENSANAG00000019745)	ARHGAP4 (ENSANAG00000023680)	AVPR2 (ENSANAG00000022496)	L1CAM (ENSANAG00000035752)	PDZD4 (ENSANAG00000026191)	SSR4 (ENSANAG00000035059)	ENSANAG00000024077	SRPK3 (ENSANAG00000037077)	PLXNB3 (ENSANAG00000036384)
Cebidae	ANCESTRAL SPECIES	27	ENSGT00410000025802.h.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b.n ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426.a #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Marmoset	MODERN SPECIES	78	GAB3 (ENSCJAG00000016753) #17	IKBKG (ENSCJAG00000016764)	G6PD (ENSCJAG00000016775)	FAM3A (ENSCJAG00000016787)	SLC10A3 (ENSCJAG00000077479) #31	UBL4A (ENSCJAG00000074416) #30	LAGE3 (ENSCJAG00000041329) #29	PLXNA3 (ENSCJAG00000016816) #28	FAM50A (ENSCJAG00000063509)	GDI1 (ENSCJAG00000016910) #27	ATP6AP1 (ENSCJAG00000040642) #26	ENSCJAG00000016995 #25	DNASE1L1 (ENSCJAG00000011800) #24	ENSCJAG00000011822 ##23	EMD (ENSCJAG00000011853)	FLNA (ENSCJAG00000034881) #22	TKTL1 (ENSCJAG00000014368) #32	TEX28 (ENSCJAG00000042631) #33	ENSCJAG00000014412 #34	MECP2 (ENSCJAG00000016796) #35	IRAK1 (ENSCJAG00000014452) #36	RENBP (ENSCJAG00000014500)	NAA10 (ENSCJAG00000014506)	AVPR2 (ENSCJAG00000011022)	ARHGAP4 (ENSCJAG00000011008)	L1CAM (ENSCJAG00000011023)	ENSCJAG00000022809	ENSCJAG00000074256	SSR4 (ENSCJAG00000011167)	PDZD4 (ENSCJAG00000011185)	SRPK3 (ENSCJAG00000011233)
Cebidae_a	ANCESTRAL SPECIES	78	ENSGT00410000025802.h.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b.n ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426.a #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000147052	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Bolivian squirrel monkey	MODERN SPECIES	236	IKBKG (ENSSBOG00000033453)	G6PD (ENSSBOG00000003239)	FAM3A (ENSSBOG00000030279)	SLC10A3 (ENSSBOG00000027728) #31	UBL4A (ENSSBOG00000030369) #30	LAGE3 (ENSSBOG00000024470) #29	PLXNA3 (ENSSBOG00000034877) #28	FAM50A (ENSSBOG00000029861)	GDI1 (ENSSBOG00000021247) #27	ATP6AP1 (ENSSBOG00000027327) #26	TAFAZZIN (ENSSBOG00000029961) #25	ENSSBOG00000033124	DNASE1L1 (ENSSBOG00000028977) #24	ENSSBOG00000025724 ##23	EMD (ENSSBOG00000027560)	FLNA (ENSSBOG00000035541) #22	TKTL1 (ENSSBOG00000020176) #32	TEX28 (ENSSBOG00000035728) #33	ENSSBOG00000022236 #34	ENSSBOG00000025722	MECP2 (ENSSBOG00000024999) #35	ENSSBOG00000017747	IRAK1 (ENSSBOG00000018599) #36	HCFC1 (ENSSBOG00000034222)	RENBP (ENSSBOG00000034728)	ENSSBOG00000020071	ARHGAP4 (ENSSBOG00000023946)	AVPR2 (ENSSBOG00000031595)	L1CAM (ENSSBOG00000033301)	PDZD4 (ENSSBOG00000033217)	SSR4 (ENSSBOG00000022316)
Capuchin	MODERN SPECIES	996															EMD (ENSCCAG00000025612)	FLNA (ENSCCAG00000027099) #22
Tarsier	MODERN SPECIES	4908																FLNA (ENSTSYG00000035928) #22
Strepsirrhini	ANCESTRAL SPECIES	45		ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Lemuriformes	ANCESTRAL SPECIES	60		ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Mouse lemur	MODERN SPECIES	169	ENSMICG00000041505 ##29	ENSMICG00000031449	IKBKG (ENSMICG00000035937)	G6PD (ENSMICG00000016481)	FAM3A (ENSMICG00000016470)	SLC10A3 (ENSMICG00000016468) #31	UBL4A (ENSMICG00000016459) #30	PLXNA3 (ENSMICG00000016439) #28	FAM50A (ENSMICG00000016428)	GDI1 (ENSMICG00000016418) #27	ATP6AP1 (ENSMICG00000016405) #26	TAFAZZIN (ENSMICG00000030766) #25	DNASE1L1 (ENSMICG00000035242) #24	ENSMICG00000033705 ##23	EMD (ENSMICG00000004682)	FLNA (ENSMICG00000004663) #22	GAB3 (ENSMICG00000000264) #17	ENSMICG00000002818 #18	MPP1 (ENSMICG00000002828) #19	SMIM9 (ENSMICG00000043321) #20	ENSMICG00000048060	ENSMICG00000009653	ENSMICG00000037635	F8 (ENSMICG00000029671) #21	ENSMICG00000007052	ENSMICG00000046481	ENSMICG00000036428	ENSMICG00000047033	ENSMICG00000028940 ##15	CMC4 (ENSMICG00000046262) #14	MTCP1 (ENSMICG00000037190) #13
Lemuriformes_a	ANCESTRAL SPECIES	110		ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Coquerels sifaka	MODERN SPECIES	882		IKBKG (ENSPCOG00000026138)	G6PD (ENSPCOG00000028512)	FAM3A (ENSPCOG00000016869)	SLC10A3 (ENSPCOG00000025772) #31	UBL4A (ENSPCOG00000022735) #30	LAGE3 (ENSPCOG00000027993) #29	PLXNA3 (ENSPCOG00000015843) #28	ENSPCOG00000024061	GDI1 (ENSPCOG00000015358) #27	ATP6AP1 (ENSPCOG00000015508) #26	TAFAZZIN (ENSPCOG00000023186) #25	DNASE1L1 (ENSPCOG00000022635) #24	ENSPCOG00000027122 ##23	EMD (ENSPCOG00000015697)	FLNA (ENSPCOG00000011059) #22	TKTL1 (ENSPCOG00000023105) #32	ENSPCOG00000015866 #34	MECP2 (ENSPCOG00000024848) #35	IRAK1 (ENSPCOG00000027349) #36	TMEM187 (ENSPCOG00000024026) #37	HCFC1 (ENSPCOG00000028065)	RENBP (ENSPCOG00000013414)	ENSPCOG00000027024	ARHGAP4 (ENSPCOG00000009927)	AVPR2 (ENSPCOG00000008409)	L1CAM (ENSPCOG00000010437)	PDZD4 (ENSPCOG00000025180)	SSR4 (ENSPCOG00000028866)	IDH3G (ENSPCOG00000023374)	SRPK3 (ENSPCOG00000018569)
Greater bamboo lemur	MODERN SPECIES	1118															ENSPSMG00000013348	FLNA (ENSPSMG00000014201) #22	ENSPSMG00000015404 #23	DNASE1L1 (ENSPSMG00000015470) #24	TAFAZZIN (ENSPSMG00000015567) #25	ATP6AP1 (ENSPSMG00000015674) #26
Bushbaby	MODERN SPECIES	364	ENSOGAG00000027129	ENSOGAG00000031211	IKBKG (ENSOGAG00000024983)	G6PD (ENSOGAG00000033296)	FAM3A (ENSOGAG00000016669)	SLC10A3 (ENSOGAG00000002637) #31	UBL4A (ENSOGAG00000030091) #30	PLXNA3 (ENSOGAG00000008330) #28	FAM50A (ENSOGAG00000008322)	GDI1 (ENSOGAG00000008317) #27	ATP6AP1 (ENSOGAG00000008310) #26	TAFAZZIN (ENSOGAG00000008304) #25	DNASE1L1 (ENSOGAG00000000100) #24	ENSOGAG00000000099 ##23	EMD (ENSOGAG00000029264)	FLNA (ENSOGAG00000015265) #22	ENSOGAG00000017264	ENSOGAG00000027452	TKTL1 (ENSOGAG00000000901) #32	TEX28 (ENSOGAG00000000900) #33	ENSOGAG00000000897 #34	MECP2 (ENSOGAG00000015115) #35	IRAK1 (ENSOGAG00000015108) #36	TMEM187 (ENSOGAG00000026922) #37	HCFC1 (ENSOGAG00000015100)	RENBP (ENSOGAG00000032778)	NAA10 (ENSOGAG00000013263)	ARHGAP4 (ENSOGAG00000015087)	AVPR2 (ENSOGAG00000030887)	L1CAM (ENSOGAG00000015077)	PDZD4 (ENSOGAG00000006741)
Euarchontoglires_A	ANCESTRAL SPECIES	11	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Tree shrew	MODERN SPECIES	5111															EMD (ENSTBEG00000012614)	FLNA (ENSTBEG00000011283) #22	ENSTBEG00000011020 #32
Glires	ANCESTRAL SPECIES	10	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Lagomorpha	ANCESTRAL SPECIES	103					ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Pika	MODERN SPECIES	4354																FLNA (ENSOPRG00000013720) #22
Rabbit	DUPLICATION
Rabbit	MODERN SPECIES	549	PDZD4 (ENSOCUG00000017200)	L1CAM (ENSOCUG00000001102)	AVPR2 (ENSOCUG00000015695)	ARHGAP4 (ENSOCUG00000001107)	NAA10 (ENSOCUG00000001111)	RENBP (ENSOCUG00000025840)	HCFC1 (ENSOCUG00000001113)	TMEM187 (ENSOCUG00000001116) #37	IRAK1 (ENSOCUG00000025860) #36	MECP2 (ENSOCUG00000013147) #35	OPN1MW (ENSOCUG00000011466) #34	TEX28 (ENSOCUG00000021000) #33	TKTL1 (ENSOCUG00000000883) #32	FLNA (ENSOCUG00000000880) #22	EMD (ENSOCUG00000000882)	RA_m006_jsm7BED4f (ENSOCUG00000024511) #22	TAFAZZIN (ENSOCUG00000000885) #25	ENSOCUG00000017631 #26	GDI1 (ENSOCUG00000017639) #27	FAM50A (ENSOCUG00000017644)	PLXNA3 (ENSOCUG00000015623) #28	LAGE3 (ENSOCUG00000028990) #29	SLC10A3 (ENSOCUG00000022433) #31	FAM3A (ENSOCUG00000015663)	G6PD (ENSOCUG00000007866)	IKBKG (ENSOCUG00000007873)
Rabbit	MODERN SPECIES	549				IKBKG (ENSOCUG00000007873)	G6PD (ENSOCUG00000007866)	FAM3A (ENSOCUG00000015663)	SLC10A3 (ENSOCUG00000022433) #31	LAGE3 (ENSOCUG00000028990) #29	PLXNA3 (ENSOCUG00000015623) #28	FAM50A (ENSOCUG00000017644)	GDI1 (ENSOCUG00000017639) #27	ENSOCUG00000017631 #26	TAFAZZIN (ENSOCUG00000000885) #25	RA_m006_jsm7BED4f (ENSOCUG00000024511) #22	EMD (ENSOCUG00000000882)	FLNA (ENSOCUG00000000880) #22	TKTL1 (ENSOCUG00000000883) #32	TEX28 (ENSOCUG00000021000) #33	OPN1MW (ENSOCUG00000011466) #34	MECP2 (ENSOCUG00000013147) #35	IRAK1 (ENSOCUG00000025860) #36	TMEM187 (ENSOCUG00000001116) #37	HCFC1 (ENSOCUG00000001113)	RENBP (ENSOCUG00000025840)	NAA10 (ENSOCUG00000001111)	ARHGAP4 (ENSOCUG00000001107)	AVPR2 (ENSOCUG00000015695)	L1CAM (ENSOCUG00000001102)	PDZD4 (ENSOCUG00000017200)	ENSOCUG00000026260	SSR4 (ENSOCUG00000027360)
Rodentia	ANCESTRAL SPECIES	10	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Rodentia_B	ANCESTRAL SPECIES	16	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Myomorpha	ANCESTRAL SPECIES	6	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Muroidea	ANCESTRAL SPECIES	13	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Muroidea_A	ANCESTRAL SPECIES	7	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Cricetidae	ANCESTRAL SPECIES	8	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Cricetidae_B	ANCESTRAL SPECIES	28	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Northern American deer mouse	MODERN SPECIES	475	ENSPEMG00000027888 ##29	ENSPEMG00000029875 ##29	Ikbkg (ENSPEMG00000031110)	ENSPEMG00000017532	Fam3a (ENSPEMG00000004757)	Ubl4a (ENSPEMG00000027881) #30	Lage3 (ENSPEMG00000011229) #29	Plxna3 (ENSPEMG00000012781) #28	Fam50a (ENSPEMG00000001727)	Gdi1 (ENSPEMG00000010952) #27	Atp6ap1 (ENSPEMG00000009724) #26	Tafazzin (ENSPEMG00000007822) #25	Dnase1l1 (ENSPEMG00000013008) #24	ENSPEMG00000015703 ##23	Emd (ENSPEMG00000012081)	Flna (ENSPEMG00000009562) #22	Tktl1 (ENSPEMG00000012644) #32	Tex28 (ENSPEMG00000009005) #33	Opn1mw (ENSPEMG00000010994) #34	Mecp2 (ENSPEMG00000015115) #35	ENSPEMG00000025112	Irak1 (ENSPEMG00000001469) #36	Hcfc1 (ENSPEMG00000011837)	ENSPEMG00000010870	Arhgap4 (ENSPEMG00000019112)	Avpr2 (ENSPEMG00000008325)	L1cam (ENSPEMG00000011592)	Pdzd4 (ENSPEMG00000008494)	Ssr4 (ENSPEMG00000008760)	Idh3g (ENSPEMG00000011232)	Srpk3 (ENSPEMG00000012149)
Prairie vole	MODERN SPECIES	168	ENSMOCG00000017711 ##29	Ikbkg (ENSMOCG00000011244)	ENSMOCG00000015421	Fam3a (ENSMOCG00000016025)	Slc10a3 (ENSMOCG00000008789) #31	Ubl4a (ENSMOCG00000000785) #30	ENSMOCG00000002473 #29	Plxna3 (ENSMOCG00000002375) #28	Fam50a (ENSMOCG00000015890)	Gdi1 (ENSMOCG00000006575) #27	Atp6ap1 (ENSMOCG00000001026) #26	Tafazzin (ENSMOCG00000010108) #25	Dnase1l1 (ENSMOCG00000017402) #24	ENSMOCG00000013831 ##23	Emd (ENSMOCG00000003977)	Flna (ENSMOCG00000007826) #22	Tex28 (ENSMOCG00000011491) #33	ENSMOCG00000017630 #34
Cricetinae	ANCESTRAL SPECIES	46	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b	ENSGT00950000182955.a.b.a
Chinese hamster chok1gshd	MODERN SPECIES	16	ENSCGRG00001018213	Or7r1 (ENSCGRG00001002331)	Ikbkg (ENSCGRG00001023852)	G6PDH (ENSCGRG00001009805)	Fam3a (ENSCGRG00001017590)	Ubl4a (ENSCGRG00001024649) #30	Lage3 (ENSCGRG00001006943) #29	Plxna3 (ENSCGRG00001018950) #28	Fam50a (ENSCGRG00001022147)	Gdi1 (ENSCGRG00001020747) #27	Atp6ap1 (ENSCGRG00001015351) #26	TAZ (ENSCGRG00001016189) #25	DNASE1L1 (ENSCGRG00001019882) #24	ENSCGRG00001008387 ##23	Emd (ENSCGRG00001023962)	Flna (ENSCGRG00001013154) #22	ENSCGRG00001010950	Tex28 (ENSCGRG00001014288) #33	Opn1mw (ENSCGRG00001024157) #34	Mecp2 (ENSCGRG00001017650) #35	ENSCGRG00001022957	Irak1 (ENSCGRG00001013928) #36	Hcfc1 (ENSCGRG00001019535)	Naa10 (ENSCGRG00001012595)	Arhgap4 (ENSCGRG00001023232)	Avpr2 (ENSCGRG00001010799)	L1cam (ENSCGRG00001020541)	Pdzd4 (ENSCGRG00001012732)	Ssr4 (ENSCGRG00001019369)	Idh3g (ENSCGRG00001012756)	Srpk3 (ENSCGRG00001005920)
Golden Hamster	MODERN SPECIES	161																ENSMAUG00000013774 #22
Murinae	ANCESTRAL SPECIES	14	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Mus	ANCESTRAL SPECIES	9	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Mus_A	ANCESTRAL SPECIES	15	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Mus_B	ANCESTRAL SPECIES	14	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Mus_C	ANCESTRAL SPECIES	27	ENSGT00410000025802.g.b.q.a ##29	ENSGT00530000063808.a	ENSGT00530000063435.a.o	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
spretus	MODERN SPECIES	19	MGP_SPRETEiJ_G0034344 ##29	G6pdx (MGP_SPRETEiJ_G0034343)	Ikbkg (MGP_SPRETEiJ_G0034342)	Fam3a (MGP_SPRETEiJ_G0034341)	Slc10a3 (MGP_SPRETEiJ_G0034340) #31	Ubl4a (MGP_SPRETEiJ_G0034339) #30	Lage3 (MGP_SPRETEiJ_G0034338) #29	Plxna3 (MGP_SPRETEiJ_G0034337) #28	Fam50a (MGP_SPRETEiJ_G0034336)	Gdi1 (MGP_SPRETEiJ_G0034335) #27	Atp6ap1 (MGP_SPRETEiJ_G0034334) #26	Tafazzin (MGP_SPRETEiJ_G0034333) #25	Dnase1l1 (MGP_SPRETEiJ_G0034332) #24	MGP_SPRETEiJ_G0034331 ##23	Emd (MGP_SPRETEiJ_G0034330)	Flna (MGP_SPRETEiJ_G0034329) #22	Tktl1 (MGP_SPRETEiJ_G0034328) #32	Tex28 (MGP_SPRETEiJ_G0034327) #33	Opn1mw (MGP_SPRETEiJ_G0034326) #34	Mecp2 (MGP_SPRETEiJ_G0034325) #35	Irak1 (MGP_SPRETEiJ_G0034324) #36	Hcfc1 (MGP_SPRETEiJ_G0034323)	Renbp (MGP_SPRETEiJ_G0034322)	Naa10 (MGP_SPRETEiJ_G0034321)	Avpr2 (MGP_SPRETEiJ_G0034320)	Arhgap4 (MGP_SPRETEiJ_G0034319)	L1cam (MGP_SPRETEiJ_G0034318)	Pdzd4 (MGP_SPRETEiJ_G0034317)	Ssr4 (MGP_SPRETEiJ_G0034316)	Idh3g (MGP_SPRETEiJ_G0034315)	Srpk3 (MGP_SPRETEiJ_G0034314)
Steppe mouse	MODERN SPECIES	2038												ENSMSIG00000014223	Opn1mw (ENSMSIG00000014183) #34	Tex28 (ENSMSIG00000014172) #33	Tktl1 (ENSMSIG00000014148) #32	ENSMSIG00000014127 #22	Emd (ENSMSIG00000013919)
Mouse	MODERN SPECIES	37	Ctag2l1 (ENSMUSG00000079536) ##29	G6pdx (ENSMUSG00000031400)	Ikbkg (ENSMUSG00000004221)	Fam3a (ENSMUSG00000031399)	Slc10a3 (ENSMUSG00000032806) #31	Ubl4a (ENSMUSG00000015290) #30	Lage3 (ENSMUSG00000015289) #29	Plxna3 (ENSMUSG00000031398) #28	Fam50a (ENSMUSG00000001962)	Gdi1 (ENSMUSG00000015291) #27	Atp6ap1 (ENSMUSG00000019087) #26	Tafazzin (ENSMUSG00000009995) #25	Dnase1l1 (ENSMUSG00000019088) #24	Rpl10 (ENSMUSG00000008682) #23	Emd (ENSMUSG00000001964)	Flna (ENSMUSG00000031328) #22	Tktl1 (ENSMUSG00000031397) #32	Tex28 (ENSMUSG00000062564) #33	Opn1mw (ENSMUSG00000031394) #34	Mecp2 (ENSMUSG00000031393) #35	Irak1 (ENSMUSG00000031392) #36	Hcfc1 (ENSMUSG00000031386)	Renbp (ENSMUSG00000031387)	Naa10 (ENSMUSG00000031388)	Avpr2 (ENSMUSG00000031390)	Arhgap4 (ENSMUSG00000031389)	L1cam (ENSMUSG00000031391)	Pdzd4 (ENSMUSG00000002006)	Ssr4 (ENSMUSG00000002014)	Idh3g (ENSMUSG00000002010)	Srpk3 (ENSMUSG00000002007)
Ryukyu mouse	MODERN SPECIES	19	Or7r1 (MGP_CAROLIEiJ_G0033189)	G6pdx (MGP_CAROLIEiJ_G0033188)	Ikbkg (MGP_CAROLIEiJ_G0033187)	Fam3a (MGP_CAROLIEiJ_G0033186)	Slc10a3 (MGP_CAROLIEiJ_G0033185) #31	Ubl4a (MGP_CAROLIEiJ_G0033184) #30	Lage3 (MGP_CAROLIEiJ_G0033183) #29	Plxna3 (MGP_CAROLIEiJ_G0033182) #28	Fam50a (MGP_CAROLIEiJ_G0033181)	Gdi1 (MGP_CAROLIEiJ_G0033180) #27	Atp6ap1 (MGP_CAROLIEiJ_G0033179) #26	Tafazzin (MGP_CAROLIEiJ_G0033178) #25	Dnase1l1 (MGP_CAROLIEiJ_G0033177) #24	MGP_CAROLIEiJ_G0033176 #23	Emd (MGP_CAROLIEiJ_G0033175)	Flna (MGP_CAROLIEiJ_G0033174) #22	Tktl1 (MGP_CAROLIEiJ_G0033173) #32	Tex28 (MGP_CAROLIEiJ_G0033172) #33	Opn1mw (MGP_CAROLIEiJ_G0033171) #34	Mecp2 (MGP_CAROLIEiJ_G0033170) #35	Irak1 (MGP_CAROLIEiJ_G0033169) #36	Hcfc1 (MGP_CAROLIEiJ_G0033168)	Renbp (MGP_CAROLIEiJ_G0033167)	Naa10 (MGP_CAROLIEiJ_G0033166)	Avpr2 (MGP_CAROLIEiJ_G0033165)	Arhgap4 (MGP_CAROLIEiJ_G0033164)	L1cam (MGP_CAROLIEiJ_G0033163)	Pdzd4 (MGP_CAROLIEiJ_G0033162)	Ssr4 (MGP_CAROLIEiJ_G0033161)	Idh3g (MGP_CAROLIEiJ_G0033160)	Srpk3 (MGP_CAROLIEiJ_G0033159)
Shrew mouse	MODERN SPECIES	23	Or7r1 (MGP_PahariEiJ_G0031732)	G6pdx (MGP_PahariEiJ_G0031731)	Ikbkg (MGP_PahariEiJ_G0031730)	Fam3a (MGP_PahariEiJ_G0031729)	Slc10a3 (MGP_PahariEiJ_G0031728) #31	Ubl4a (MGP_PahariEiJ_G0031727) #30	Lage3 (MGP_PahariEiJ_G0031726) #29	Plxna3 (MGP_PahariEiJ_G0031725) #28	Fam50a (MGP_PahariEiJ_G0031724)	Gdi1 (MGP_PahariEiJ_G0031723) #27	Atp6ap1 (MGP_PahariEiJ_G0031722) #26	Tafazzin (MGP_PahariEiJ_G0031721) #25	Dnase1l1 (MGP_PahariEiJ_G0031720) #24	MGP_PahariEiJ_G0031719 #23	Emd (MGP_PahariEiJ_G0031718)	Flna (MGP_PahariEiJ_G0031717) #22	MGP_PahariEiJ_G0031716 #32	Tex28 (MGP_PahariEiJ_G0031715) #33	Opn1mw (MGP_PahariEiJ_G0031714) #34	Mecp2 (MGP_PahariEiJ_G0031713) #35	Irak1 (MGP_PahariEiJ_G0031712) #36	Hcfc1 (MGP_PahariEiJ_G0031711)	Renbp (MGP_PahariEiJ_G0031710)	Naa10 (MGP_PahariEiJ_G0031709)	Avpr2 (MGP_PahariEiJ_G0031708)	Arhgap4 (MGP_PahariEiJ_G0031707)	L1cam (MGP_PahariEiJ_G0031706)	Pdzd4 (MGP_PahariEiJ_G0031705)	Ssr4 (MGP_PahariEiJ_G0031704)	Idh3g (MGP_PahariEiJ_G0031703)	Srpk3 (MGP_PahariEiJ_G0031702)
Rat	MODERN SPECIES	46	Ikbkg (ENSRNOG00000060936)	G6pd (ENSRNOG00000056728)	Fam3a (ENSRNOG00000060623)	Ubl4a (ENSRNOG00000053061) #30	Slc10a3 (ENSRNOG00000060580) #31	Lage3 (ENSRNOG00000053456)	Plxna3 (ENSRNOG00000060464) #28	Fam50a (ENSRNOG00000058439)	Gdi1 (ENSRNOG00000056870) #27	Atp6ap1 (ENSRNOG00000054352) #26	Tafazzin (ENSRNOG00000053023) #25	ENSRNOG00000063225	Dnase1l1 (ENSRNOG00000055641) #24	Rpl10 (ENSRNOG00000056765) ##23	Emd (ENSRNOG00000058882)	Flna (ENSRNOG00000054890) #22	Tktl1 (ENSRNOG00000055557) #32	Tex28 (ENSRNOG00000051438) #33	Opn1mw (ENSRNOG00000051529) #34	Mecp2 (ENSRNOG00000056659) #35	Irak1 (ENSRNOG00000060869) #36	Hcfc1 (ENSRNOG00000051948)	Renbp (ENSRNOG00000054765)	Naa10 (ENSRNOG00000060063)	Avpr2 (ENSRNOG00000059862)	Arhgap4 (ENSRNOG00000058545)	L1cam (ENSRNOG00000061230)	Pdzd4 (ENSRNOG00000056174)	Ssr4 (ENSRNOG00000053172)	Idh3g (ENSRNOG00000055572)	Srpk3 (ENSRNOG00000054548)
Upper Galilee mountains blind mole rat	MODERN SPECIES	660	Ikbkg (ENSNGAG00000019535)	ENSNGAG00000020668	Fam3a (ENSNGAG00000016683)	Slc10a3 (ENSNGAG00000007975) #31	Ubl4a (ENSNGAG00000023782) #30	Lage3 (ENSNGAG00000023293) #29	Plxna3 (ENSNGAG00000022548) #28	ENSNGAG00000012608	Fam50a (ENSNGAG00000021495)	Gdi1 (ENSNGAG00000023333) #27	Atp6ap1 (ENSNGAG00000021512) #26	Tafazzin (ENSNGAG00000008680) #25	Dnase1l1 (ENSNGAG00000024155) #24	ENSNGAG00000023746 ##23	Emd (ENSNGAG00000018770)	Flna (ENSNGAG00000013524) #22	Tex28 (ENSNGAG00000023701) #33	Opn1mw (ENSNGAG00000011604) #34	Mecp2 (ENSNGAG00000009171) #35	Irak1 (ENSNGAG00000011647) #36	Hcfc1 (ENSNGAG00000013083)	Renbp (ENSNGAG00000021686)	Naa10 (ENSNGAG00000020303)	Arhgap4 (ENSNGAG00000015413)	Avpr2 (ENSNGAG00000009849)	L1cam (ENSNGAG00000013550)	Pdzd4 (ENSNGAG00000009443)	ENSNGAG00000015787	Idh3g (ENSNGAG00000017889)	Srpk3 (ENSNGAG00000021121)	Plxnb3 (ENSNGAG00000023368)
Lesser Egyptian jerboa	MODERN SPECIES	224			Ikbkg (ENSJJAG00000023964)	ENSJJAG00000023806	Fam3a (ENSJJAG00000023156)	Slc10a3 (ENSJJAG00000022929) #31	ENSJJAG00000022788 #30	Lage3 (ENSJJAG00000022478) #29	Plxna3 (ENSJJAG00000020257) #28	Fam50a (ENSJJAG00000010389)	Gdi1 (ENSJJAG00000008815) #27	ENSJJAG00000019557 #26	Tafazzin (ENSJJAG00000015233) #25	ENSJJAG00000014235 ##23	Emd (ENSJJAG00000019656)	Flna (ENSJJAG00000015450) #22	Tktl1 (ENSJJAG00000010328) #32	Tex28 (ENSJJAG00000019769) #33	Opn1mw (ENSJJAG00000022699) #34	ENSJJAG00000022596	Mecp2 (ENSJJAG00000022463) #35	Irak1 (ENSJJAG00000013849) #36	Hcfc1 (ENSJJAG00000012815)	Renbp (ENSJJAG00000010739)	Naa10 (ENSJJAG00000023398)	Arhgap4 (ENSJJAG00000021798)	Avpr2 (ENSJJAG00000018314)	L1cam (ENSJJAG00000021077)	Pdzd4 (ENSJJAG00000018534)	Ssr4 (ENSJJAG00000017842)	Idh3g (ENSJJAG00000015962)
Kangaroo rat	MODERN SPECIES	526	Idh3g (ENSDORG00000006029)	Ssr4 (ENSDORG00000006030)	Pdzd4 (ENSDORG00000028112)	L1cam (ENSDORG00000014093)	Avpr2 (ENSDORG00000002747)	Arhgap4 (ENSDORG00000002750)	Naa10 (ENSDORG00000002753)	Renbp (ENSDORG00000002755)	Hcfc1 (ENSDORG00000002756)	Irak1 (ENSDORG00000013876) #36	Mecp2 (ENSDORG00000014978) #35	Opn1mw (ENSDORG00000026454) #34	Tex28 (ENSDORG00000010136) #33	Tktl1 (ENSDORG00000013785) #32	Emd (ENSDORG00000004375)	Flna (ENSDORG00000004370) #22	ENSDORG00000004369 ##23	Tafazzin (ENSDORG00000029677) #25	Atp6ap1 (ENSDORG00000008847) #26	Gdi1 (ENSDORG00000008848) #27	Fam50a (ENSDORG00000008851)	Plxna3 (ENSDORG00000000853) #28	Lage3 (ENSDORG00000029875) #29	Ubl4a (ENSDORG00000005196) #30	Slc10a3 (ENSDORG00000005197) #31	Fam3a (ENSDORG00000025173)	ENSDORG00000012731	Ikbkg (ENSDORG00000028140)	ENSDORG00000000625 ##29	Gab3 (ENSDORG00000006809) #17	ENSDORG00000013566 #18
Rodentia_A	ANCESTRAL SPECIES	9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Hystricomorpha	ANCESTRAL SPECIES	54	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Hystricomorpha_a	ANCESTRAL SPECIES	61	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Hystricomorpha_b	ANCESTRAL SPECIES	84		ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.B.a.a	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b
Long-tailed chinchilla	MODERN SPECIES	287	SRPK3 (ENSCLAG00000001932)	IDH3G (ENSCLAG00000002456)	SSR4 (ENSCLAG00000002670)	PDZD4 (ENSCLAG00000002707)	L1CAM (ENSCLAG00000001453)	AVPR2 (ENSCLAG00000002650)	ENSCLAG00000001334	NAA10 (ENSCLAG00000001427)	RENBP (ENSCLAG00000003810)	HCFC1 (ENSCLAG00000004175)	IRAK1 (ENSCLAG00000006192) #36	MECP2 (ENSCLAG00000001648) #35	ENSCLAG00000001715 #34	TKTL1 (ENSCLAG00000001825) #32	EMD (ENSCLAG00000002874)	FLNA (ENSCLAG00000003106) #22	ENSCLAG00000003108 ##23	DNASE1L1 (ENSCLAG00000003494) #24	TAFAZZIN (ENSCLAG00000010970) #25	ATP6AP1 (ENSCLAG00000002132) #26	GDI1 (ENSCLAG00000002425) #27	ENSCLAG00000002733	PLXNA3 (ENSCLAG00000001910) #28	LAGE3 (ENSCLAG00000002127) #29	UBL4A (ENSCLAG00000002161) #30	SLC10A3 (ENSCLAG00000002307) #31	FAM3A (ENSCLAG00000002528)	G6PD (ENSCLAG00000003284)	IKBKG (ENSCLAG00000003721)	ENSCLAG00000017457	ENSCLAG00000017603
Degu	MODERN SPECIES	259			IKBKG (ENSODEG00000005911)	ENSODEG00000006077	FAM3A (ENSODEG00000006189)	UBL4A (ENSODEG00000006287) #30	ENSODEG00000006315 #29	PLXNA3 (ENSODEG00000006368) #28	ENSODEG00000006510	GDI1 (ENSODEG00000006550) #27	ATP6AP1 (ENSODEG00000003643) #26	TAFAZZIN (ENSODEG00000003758) #25	DNASE1L1 (ENSODEG00000003830) #24	ENSODEG00000003868 ##23	EMD (ENSODEG00000003890)	FLNA (ENSODEG00000004055) #22	TKTL1 (ENSODEG00000004431) #32	ENSODEG00000004454	ENSODEG00000004473 #34	ENSODEG00000004516	MECP2 (ENSODEG00000004523) #35	IRAK1 (ENSODEG00000004583) #36	HCFC1 (ENSODEG00000004823)	RENBP (ENSODEG00000005065)	ENSODEG00000005100	ARHGAP4 (ENSODEG00000005124)	AVPR2 (ENSODEG00000005166)	ENSODEG00000005204	L1CAM (ENSODEG00000005259)	PDZD4 (ENSODEG00000005482)	SSR4 (ENSODEG00000002732)
Guinea pig	MODERN SPECIES	148	ENSCPOG00000026136	IKBKG (ENSCPOG00000021550)	G6PD (ENSCPOG00000021395)	FAM3A (ENSCPOG00000019367)	SLC10A3 (ENSCPOG00000007289) #31	UBL4A (ENSCPOG00000040690) #30	ENSCPOG00000034445 #29	PLXNA3 (ENSCPOG00000011493) #28	ENSCPOG00000005974	GDI1 (ENSCPOG00000032738) #27	ATP6AP1 (ENSCPOG00000005972) #26	TAFAZZIN (ENSCPOG00000020454) #25	DNASE1L1 (ENSCPOG00000005648) #24	ENSCPOG00000002355 ##23	EMD (ENSCPOG00000002642)	FLNA (ENSCPOG00000002672) #22	TKTL1 (ENSCPOG00000011767) #32	ENSCPOG00000021789 #33	ENSCPOG00000011198 #34	MECP2 (ENSCPOG00000012579) #35	IRAK1 (ENSCPOG00000039151) #36	ENSCPOG00000024784	NAA10 (ENSCPOG00000011495)	ENSCPOG00000026143	AVPR2 (ENSCPOG00000012697)	L1CAM (ENSCPOG00000005519)	PDZD4 (ENSCPOG00000019482)	SSR4 (ENSCPOG00000006898)	IDH3G (ENSCPOG00000006890)	SRPK3 (ENSCPOG00000006881)	PLXNB3 (ENSCPOG00000006868)
Sciuridae	ANCESTRAL SPECIES	27	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Eurasian red squirrel	MODERN SPECIES	156	SSR4 (ENSSVLG00005019816)	PDZD4 (ENSSVLG00005019686)	AVPR2 (ENSSVLG00005019578)	ENSSVLG00005019536	ARHGAP4 (ENSSVLG00005019458)	NAA10 (ENSSVLG00005019123)	RENBP (ENSSVLG00005019023)	HCFC1 (ENSSVLG00005018524)	ENSSVLG00005018093 #36	MECP2 (ENSSVLG00005017899) #35	ENSSVLG00005017793 #34	ENSSVLG00005017738	TEX28 (ENSSVLG00005017596) #33	TKTL1 (ENSSVLG00005017318) #32	EMD (ENSSVLG00005019520)	FLNA (ENSSVLG00005018546) #22	ENSSVLG00005018375 ##23	DNASE1L1 (ENSSVLG00005018343) #24	TAFAZZIN (ENSSVLG00005018196) #25	ATP6AP1 (ENSSVLG00005018016) #26	GDI1 (ENSSVLG00005017962) #27	FAM50A (ENSSVLG00005017921)	PLXNA3 (ENSSVLG00005017881) #28	LAGE3 (ENSSVLG00005017858) #29	UBL4A (ENSSVLG00005017819) #30	SLC10A3 (ENSSVLG00005017774) #31	FAM3A (ENSSVLG00005017584)	G6PD (ENSSVLG00005017520)	IKBKG (ENSSVLG00005017293)	ENSSVLG00005017218	ENSSVLG00005017166
Marmotini	ANCESTRAL SPECIES	83		ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.e	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Marmotini_b	ANCESTRAL SPECIES	124		ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.e	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b
Arctic ground squirrel	MODERN SPECIES	823	ENSUPAG00010010804	ENSUPAG00010010808	IKBKG (ENSUPAG00010010819)	FAM3A (ENSUPAG00010010917)	SLC10A3 (ENSUPAG00010010974) #31	ENSUPAG00010010991 #29	ENSUPAG00010010993	PLXNA3 (ENSUPAG00010011001) #28	ENSUPAG00010011078	GDI1 (ENSUPAG00010011085) #27	ATP6AP1 (ENSUPAG00010011086) #26	TAFAZZIN (ENSUPAG00010000055) #25	DNASE1L1 (ENSUPAG00010000232) #24	ENSUPAG00010000252 #23	EMD (ENSUPAG00010000276)	FLNA (ENSUPAG00010000336) #22
Squirrel	MODERN SPECIES	409		ENSSTOG00000027400	G6PD (ENSSTOG00000021077)	IKBKG (ENSSTOG00000011082)	FAM3A (ENSSTOG00000022234)	SLC10A3 (ENSSTOG00000026515) #31	UBL4A (ENSSTOG00000022150) #30	PLXNA3 (ENSSTOG00000003432) #28	ENSSTOG00000004448	GDI1 (ENSSTOG00000004429) #27	ATP6AP1 (ENSSTOG00000004401) #26	TAFAZZIN (ENSSTOG00000011873) #25	DNASE1L1 (ENSSTOG00000011867) #24	ENSSTOG00000011857 ##23	EMD (ENSSTOG00000014689)	FLNA (ENSSTOG00000005036) #22	TKTL1 (ENSSTOG00000005014) #32	TEX28 (ENSSTOG00000022078) #33	ENSSTOG00000024701 #34	MECP2 (ENSSTOG00000006094) #35	IRAK1 (ENSSTOG00000007991) #36	HCFC1 (ENSSTOG00000029220)	RENBP (ENSSTOG00000010247)	NAA10 (ENSSTOG00000010237)	ARHGAP4 (ENSSTOG00000022503)	AVPR2 (ENSSTOG00000008352)	L1CAM (ENSSTOG00000008316)	PDZD4 (ENSSTOG00000021423)	SSR4 (ENSSTOG00000008278)	IDH3G (ENSSTOG00000008261)	SRPK3 (ENSSTOG00000008233)
Alpin marmot	MODERN SPECIES	136			ENSMMMG00000014778	IKBKG (ENSMMMG00000014671)	G6PD (ENSMMMG00000014645)	FAM3A (ENSMMMG00000014550)	SLC10A3 (ENSMMMG00000014545) #31	UBL4A (ENSMMMG00000014537) #30	PLXNA3 (ENSMMMG00000014513) #28	FAM50A (ENSMMMG00000014490)	GDI1 (ENSMMMG00000014475) #27	TAFAZZIN (ENSMMMG00000014302) #25	DNASE1L1 (ENSMMMG00000014299) #24	ENSMMMG00000014279 ##23	EMD (ENSMMMG00000014270)	FLNA (ENSMMMG00000010080) #22	TKTL1 (ENSMMMG00000010036) #32	TEX28 (ENSMMMG00000010023) #33	ENSMMMG00000010010 #34	MECP2 (ENSMMMG00000009970) #35	IRAK1 (ENSMMMG00000009239) #36	HCFC1 (ENSMMMG00000009171)	RENBP (ENSMMMG00000009149)	ENSMMMG00000009143	ARHGAP4 (ENSMMMG00000008497)	AVPR2 (ENSMMMG00000008488)	L1CAM (ENSMMMG00000008292)	PDZD4 (ENSMMMG00000008247)	SSR4 (ENSMMMG00000008221)	IDH3G (ENSMMMG00000008193)	PLXNB3 (ENSMMMG00000008113)
Laurasiatheria	ANCESTRAL SPECIES	26	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Eulipotyphla	ANCESTRAL SPECIES	1880															ENSGT00390000002034	ENSGT00940000153588.b #22
Common shrew	MODERN SPECIES	7189																FLNA (ENSSARG00000003799) #22
Hedgehog	MODERN SPECIES	8155															EMD (ENSEEUG00000006555)	FLNA (ENSEEUG00000005817) #22
Laurasiatheria_a	ANCESTRAL SPECIES	10	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b
Laurasiatheria_b	ANCESTRAL SPECIES	10	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Carnivora	ANCESTRAL SPECIES	11	ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Felidae	ANCESTRAL SPECIES	29	ENSGT00940000159803 #17	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Panthera	ANCESTRAL SPECIES	56															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Panthera_a	ANCESTRAL SPECIES	65															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
lion	MODERN SPECIES	50	SSR4 (ENSPLOG00000014154)	PDZD4 (ENSPLOG00000013907)	L1CAM (ENSPLOG00000013396)	AVPR2 (ENSPLOG00000013280)	ARHGAP4 (ENSPLOG00000012775)	NAA10 (ENSPLOG00000012684)	RENBP (ENSPLOG00000012442)	HCFC1 (ENSPLOG00000011916)	TMEM187 (ENSPLOG00000011845) #37	IRAK1 (ENSPLOG00000011465) #36	MECP2 (ENSPLOG00000011316) #35	ENSPLOG00000011231 #34	TEX28 (ENSPLOG00000011170) #33	TKTL1 (ENSPLOG00000010974) #32	EMD (ENSPLOG00000010914)	FLNA (ENSPLOG00000010685) #22
leopard	MODERN SPECIES	214															EMD (ENSPPRG00000008705)	FLNA (ENSPPRG00000008614) #22	TKTL1 (ENSPPRG00000005619) #32	ENSPPRG00000005526 #34	MECP2 (ENSPPRG00000004602) #35	IRAK1 (ENSPPRG00000002790) #36	HCFC1 (ENSPPRG00000001673)	RENBP (ENSPPRG00000000874)	NAA10 (ENSPPRG00000021297)	ARHGAP4 (ENSPPRG00000019046)	AVPR2 (ENSPPRG00000011559)	ENSPPRG00000011145	L1CAM (ENSPPRG00000010911)	PDZD4 (ENSPPRG00000007757)	SSR4 (ENSPPRG00000007302)	IDH3G (ENSPPRG00000007090)	SRPK3 (ENSPPRG00000006472)
Cat	MODERN SPECIES	252	ENSFCAG00000048808	IKBKG (ENSFCAG00000029840)	G6PD (ENSFCAG00000043880)	FAM3A (ENSFCAG00000035237)	SLC10A3 (ENSFCAG00000022989) #31	UBL4A (ENSFCAG00000025607) #30	LAGE3 (ENSFCAG00000038204) #29	PLXNA3 (ENSFCAG00000011400) #28	FAM50A (ENSFCAG00000011399)	GDI1 (ENSFCAG00000011398) #27	ATP6AP1 (ENSFCAG00000011397) #26	TAFAZZIN (ENSFCAG00000023652) #25	DNASE1L1 (ENSFCAG00000011396) #24	ENSFCAG00000011395 ##23	EMD (ENSFCAG00000011394)	FLNA (ENSFCAG00000011393) #22	TKTL1 (ENSFCAG00000011392) #32	TEX28 (ENSFCAG00000044525) #33	OPN1LW (ENSFCAG00000011390) #34	MECP2 (ENSFCAG00000011389) #35	IRAK1 (ENSFCAG00000010847) #36	TMEM187 (ENSFCAG00000011388) #37	HCFC1 (ENSFCAG00000011387)	RENBP (ENSFCAG00000018690)	NAA10 (ENSFCAG00000028705)	AVPR2 (ENSFCAG00000011384)	L1CAM (ENSFCAG00000008614)	ARHGAP4 (ENSFCAG00000011385)	SSR4 (ENSFCAG00000004040)	IDH3G (ENSFCAG00000033410)	SRPK3 (ENSFCAG00000043991)
Caniformia	ANCESTRAL SPECIES	22	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00410000025802.h ##29	ENSGT00410000025802.g.b ##29
Canidae	ANCESTRAL SPECIES	50	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT00410000025802.h ##29
Canis_lupus	ANCESTRAL SPECIES	22	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.g #29	ENSGT00410000025802.g.a.h #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a
Dog	MODERN SPECIES	144	IDH3G (ENSCAFG00845025145)	SSR4 (ENSCAFG00845025375)	PDZD4 (ENSCAFG00845025486)	L1CAM (ENSCAFG00845025647)	AVPR2 (ENSCAFG00845026015)	ARHGAP4 (ENSCAFG00845026108)	RENBP (ENSCAFG00845026554)	HCFC1 (ENSCAFG00845026790)	TMEM187 (ENSCAFG00845027090) #37	IRAK1 (ENSCAFG00845027126) #36	MECP2 (ENSCAFG00845027255) #35	OPN1LW (ENSCAFG00845027363) #34	TEX28 (ENSCAFG00845027400) #33	TKTL1 (ENSCAFG00845027442) #32	EMD (ENSCAFG00845027618)	FLNA (ENSCAFG00845027901) #22	RPL10 (ENSCAFG00845028627) ##23	DNASE1L1 (ENSCAFG00845028675) #24	TAZ (ENSCAFG00845028739) #25	GDI1 (ENSCAFG00845028921) #27	ATP6AP1 (ENSCAFG00845029004) #26	FAM50A (ENSCAFG00845029041)	PLXNA3 (ENSCAFG00845029121) #28	ENSCAFG00845029273 #29	UBL4A (ENSCAFG00845029287) #30	SLC10A3 (ENSCAFG00845029316) #31	ENSCAFG00845029578	G6PD (ENSCAFG00845029388)	IKBKG (ENSCAFG00845029634)	cOR7R1 (ENSCAFG00845029673)	ENSCAFG00845029686 ##29
Dingo	MODERN SPECIES	383	SSR4 (ENSCAFG00020022930)	PDZD4 (ENSCAFG00020022928)	L1CAM (ENSCAFG00020022925)	AVPR2 (ENSCAFG00020022923)	ARHGAP4 (ENSCAFG00020022156)	NAA10 (ENSCAFG00020022123)	RENBP (ENSCAFG00020022111)	HCFC1 (ENSCAFG00020022091)	IRAK1 (ENSCAFG00020022089) #36	MECP2 (ENSCAFG00020022079) #35	ENSCAFG00020022061 #34	TEX28 (ENSCAFG00020022059) #33	ENSCAFG00020022055	TKTL1 (ENSCAFG00020022053) #32	EMD (ENSCAFG00020022046)	FLNA (ENSCAFG00020009434) #22	ENSCAFG00020009114 ##23	DNASE1L1 (ENSCAFG00020009104) #24	TAFAZZIN (ENSCAFG00020009089) #25	ATP6AP1 (ENSCAFG00020009077) #26	GDI1 (ENSCAFG00020009070) #27	FAM50A (ENSCAFG00020009064)	PLXNA3 (ENSCAFG00020009040) #28	ENSCAFG00020009037 #29	UBL4A (ENSCAFG00020009032) #30	SLC10A3 (ENSCAFG00020009027) #31	FAM3A (ENSCAFG00020009021)	G6PD (ENSCAFG00020008999)	IKBKG (ENSCAFG00020008992)	ENSCAFG00020008988	ENSCAFG00020008985
Red fox	MODERN SPECIES	263	ENSVVUG00000029621	PDZD4 (ENSVVUG00000029620)	L1CAM (ENSVVUG00000029611)	AVPR2 (ENSVVUG00000029607)	ARHGAP4 (ENSVVUG00000029605)	NAA10 (ENSVVUG00000029603)	RENBP (ENSVVUG00000029602)	HCFC1 (ENSVVUG00000029596)	TMEM187 (ENSVVUG00000029595) #37	IRAK1 (ENSVVUG00000029594) #36	MECP2 (ENSVVUG00000029591) #35	ENSVVUG00000029585 #34	TKTL1 (ENSVVUG00000029580) #32	TEX28 (ENSVVUG00000029579) #33	EMD (ENSVVUG00000029577)	FLNA (ENSVVUG00000029569) #22	RPL10 (ENSVVUG00000029559) ##23	DNASE1L1 (ENSVVUG00000029556) #24	TAZ (ENSVVUG00000029551) #25	ATP6AP1 (ENSVVUG00000029548) #26	GDI1 (ENSVVUG00000029546) #27	ENSVVUG00000029545	PLXNA3 (ENSVVUG00000029541) #28	SLC10A3 (ENSVVUG00000029540) #31	FAM3A (ENSVVUG00000029538)	G6PD (ENSVVUG00000029537)	IKBKG (ENSVVUG00000029536)
Caniformia_b	ANCESTRAL SPECIES	27	ENSGT01030000235238.c	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.h ##29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Mustelinae	ANCESTRAL SPECIES	108		ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
American mink	MODERN SPECIES	402				ENSNVIG00000023588 #21	SMIM9 (ENSNVIG00000023589) #20	MPP1 (ENSNVIG00000023597) #19	DKC1 (ENSNVIG00000023613) #18	GAB3 (ENSNVIG00000023627) #17	PLXNA3 (ENSNVIG00000023655) #28	GDI1 (ENSNVIG00000023807) #27	ATP6AP1 (ENSNVIG00000023809) #26	ENSNVIG00000023810 #25	DNASE1L1 (ENSNVIG00000023816) #24	ENSNVIG00000023818 ##23	EMD (ENSNVIG00000023823)	FLNA (ENSNVIG00000023832) #22	TKTL1 (ENSNVIG00000023854) #32	TEX28 (ENSNVIG00000023857) #33	ENSNVIG00000023859 #34	MECP2 (ENSNVIG00000023863) #35	IRAK1 (ENSNVIG00000023867) #36	ENSNVIG00000023868 #37	HCFC1 (ENSNVIG00000023869)	RENBP (ENSNVIG00000023874)	NAA10 (ENSNVIG00000023879)	ARHGAP4 (ENSNVIG00000023893)	AVPR2 (ENSNVIG00000023918)	L1CAM (ENSNVIG00000023921)	PDZD4 (ENSNVIG00000023958)	SSR4 (ENSNVIG00000023964)	IDH3G (ENSNVIG00000023966)
Ferret	MODERN SPECIES	531	ENSMPUG00000008803	PDZD4 (ENSMPUG00000008855)	L1CAM (ENSMPUG00000008943)	ARHGAP4 (ENSMPUG00000008967)	AVPR2 (ENSMPUG00000008979)	NAA10 (ENSMPUG00000008989)	HCFC1 (ENSMPUG00000009029)	ENSMPUG00000009052	IRAK1 (ENSMPUG00000009059) #36	MECP2 (ENSMPUG00000009072) #35	ENSMPUG00000009081 #34	TEX28 (ENSMPUG00000009202) #33	TKTL1 (ENSMPUG00000009214) #32	ENSMPUG00000019510	EMD (ENSMPUG00000009232)	FLNA (ENSMPUG00000009293) #22	ENSMPUG00000009320 ##23	DNASE1L1 (ENSMPUG00000009354) #24	TAFAZZIN (ENSMPUG00000009363) #25	ATP6AP1 (ENSMPUG00000009450) #26	GDI1 (ENSMPUG00000009461) #27	ENSMPUG00000009476	PLXNA3 (ENSMPUG00000009629) #28	UBL4A (ENSMPUG00000009650) #30	SLC10A3 (ENSMPUG00000019511) #31	FAM3A (ENSMPUG00000009671)	G6PD (ENSMPUG00000009722)	IKBKG (ENSMPUG00000009835)	ENSMPUG00000009840	ENSMPUG00000019515
Ursidae	ANCESTRAL SPECIES	45	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.h ##29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00410000025802.g.b ##29	ENSGT00940000159803 #17
Giant Panda	MODERN SPECIES	2288	PDZD4 (ENSAMEG00000018464)	ENSAMEG00000009528	L1CAM (ENSAMEG00000018461)	AVPR2 (ENSAMEG00000018460)	ARHGAP4 (ENSAMEG00000018458)	NAA10 (ENSAMEG00000018457)	RENBP (ENSAMEG00000018452)	HCFC1 (ENSAMEG00000018450)	TMEM187 (ENSAMEG00000019206) #37	IRAK1 (ENSAMEG00000018449) #36	MECP2 (ENSAMEG00000029148) #35	ENSAMEG00000018445 #34	TEX28 (ENSAMEG00000018444) #33	ENSAMEG00000018441 #32	ENSAMEG00000007222	ENSAMEG00000007261 #22	ENSAMEG00000030923	RPL10 (ENSAMEG00000000227) ##23	ENSAMEG00000000229 #24	ENSAMEG00000000230 #25	ATP6AP1 (ENSAMEG00000000239) #26	GDI1 (ENSAMEG00000000265) #27	FAM50A (ENSAMEG00000000273)	PLXNA3 (ENSAMEG00000000281) #28	ENSAMEG00000026988 ##29	UBL4A (ENSAMEG00000026286) #30	SLC10A3 (ENSAMEG00000000359) #31	FAM3A (ENSAMEG00000000362)	G6PD (ENSAMEG00000000366)	IKBKG (ENSAMEG00000000410)	ENSAMEG00000019272
Ursus	ANCESTRAL SPECIES	220		ENSGT00410000025802.h ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22
Polar bear	MODERN SPECIES	330	DUSP9 (ENSUMAG00000020891)	ENSUMAG00000020857	BCAP31 (ENSUMAG00000020844)	SRPK3 (ENSUMAG00000020820)	IDH3G (ENSUMAG00000020814)	SSR4 (ENSUMAG00000020804)	NAA10 (ENSUMAG00000020773)	RENBP (ENSUMAG00000020768)	ENSUMAG00000020761	TMEM187 (ENSUMAG00000020759) #37	ENSUMAG00000020747 #35	ENSUMAG00000020714 #34	TEX28 (ENSUMAG00000020707) #33	TKTL1 (ENSUMAG00000020693) #32	EMD (ENSUMAG00000020684)	FLNA (ENSUMAG00000019645) #22	ENSUMAG00000019583 #23	DNASE1L1 (ENSUMAG00000019505) #24	ENSUMAG00000019531 #25	ATP6AP1 (ENSUMAG00000019476) #26	GDI1 (ENSUMAG00000019473) #27	FAM50A (ENSUMAG00000019470)	SLC10A3 (ENSUMAG00000019457) #31	FAM3A (ENSUMAG00000019452)	G6PD (ENSUMAG00000019300)	IKBKG (ENSUMAG00000019273)	ENSUMAG00000019269 ##29	ENSUMAG00000019262
American black bear	MODERN SPECIES	8253																FLNA (ENSUAMG00000001528) #22
Laurasiatheria_c	ANCESTRAL SPECIES	10	ENSGT00940000159803 #17	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Equus	ANCESTRAL SPECIES	52	ENSGT00410000025802.g.b.n ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Donkey	MODERN SPECIES	36	ENSEASG00005027434	ENSEASG00005032016 ##29	ENSEASG00005032513	G6PD (ENSEASG00005018430)	FAM3A (ENSEASG00005018431)	SLC10A3 (ENSEASG00005018434) #31	UBL4A (ENSEASG00005018436) #30	PLXNA3 (ENSEASG00005018440) #28	FAM50A (ENSEASG00005018449)	GDI1 (ENSEASG00005018454) #27	ATP6AP1 (ENSEASG00005034458) #26	TAFAZZIN (ENSEASG00005025100) #25	DNASE1L1 (ENSEASG00005028299) #24	ENSEASG00005025120 ##23	EMD (ENSEASG00005019177)	FLNA (ENSEASG00005018577) #22	TKTL1 (ENSEASG00005019179) #32	TEX28 (ENSEASG00005019182) #33	ENSEASG00005019183 #34	MECP2 (ENSEASG00005019188) #35	IRAK1 (ENSEASG00005019196) #36	TMEM187 (ENSEASG00005038494) #37	HCFC1 (ENSEASG00005019244)	RENBP (ENSEASG00005019286)	NAA10 (ENSEASG00005030165)	ARHGAP4 (ENSEASG00005019296)	AVPR2 (ENSEASG00005027808)	L1CAM (ENSEASG00005019353)	PDZD4 (ENSEASG00005028120)	SSR4 (ENSEASG00005019363)	IDH3G (ENSEASG00005019382)
Horse	MODERN SPECIES	480	ENSECAG00000029643 ##29	ENSECAG00000033189	IKBKG (ENSECAG00000020595)	G6PD (ENSECAG00000014994)	FAM3A (ENSECAG00000013840)	SLC10A3 (ENSECAG00000013796) #31	UBL4A (ENSECAG00000013506) #30	LAGE3 (ENSECAG00000038130) #29	PLXNA3 (ENSECAG00000025088) #28	FAM50A (ENSECAG00000023594)	GDI1 (ENSECAG00000017687) #27	ATP6AP1 (ENSECAG00000014216) #26	TAFAZZIN (ENSECAG00000010872) #25	DNASE1L1 (ENSECAG00000003758) #24	RPL10 (ENSECAG00000017154) #23	FLNA (ENSECAG00000009550) #22	EMD (ENSECAG00000013908)	TKTL1 (ENSECAG00000021992) #32	TEX28 (ENSECAG00000021904) #33	OPN1LW (ENSECAG00000018684) #34	MECP2 (ENSECAG00000018208) #35	IRAK1 (ENSECAG00000009585) #36	TMEM187 (ENSECAG00000001086) #37	HCFC1 (ENSECAG00000022440)	RENBP (ENSECAG00000018888)	NAA10 (ENSECAG00000015203)	ARHGAP4 (ENSECAG00000023201)	AVPR2 (ENSECAG00000022974)	L1CAM (ENSECAG00000002810)	PDZD4 (ENSECAG00000024310)	SSR4 (ENSECAG00000023150)
Chiroptera	ANCESTRAL SPECIES	48	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.a ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Microchiroptera	ANCESTRAL SPECIES	45	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.a ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Greater horseshoe bat	MODERN SPECIES		ENSRFEG00010002995 ##29	IKBKG (ENSRFEG00010003030)	G6PD (ENSRFEG00010003111)	FAM3A (ENSRFEG00010003196)	SLC10A3 (ENSRFEG00010003285) #31	UBL4A (ENSRFEG00010003315) #30	LAGE3 (ENSRFEG00010003340) #29	PLXNA3 (ENSRFEG00010003374) #28	FAM50A (ENSRFEG00010003417)	GDI1 (ENSRFEG00010003480) #27	ATP6AP1 (ENSRFEG00010003617) #26	TAZ (ENSRFEG00010003720) #25	BT_m006_jsm59FD5r (ENSRFEG00010003791) #24	RPL10 (ENSRFEG00010003909) ##23	EMD (ENSRFEG00010004008)	FLNA (ENSRFEG00010004101) #22	TKTL1 (ENSRFEG00010004159) #32	TEX28 (ENSRFEG00010004212) #33	ENSRFEG00010004230 #34	MECP2 (ENSRFEG00010004285) #35	IRAK1 (ENSRFEG00010004369) #36	TMEM187 (ENSRFEG00010004460) #37	HCFC1 (ENSRFEG00010004542)	RENBP (ENSRFEG00010004689)	ARD1A (ENSRFEG00010004730)	ARHGAP4 (ENSRFEG00010004760)	AVPR2 (ENSRFEG00010004785)	ENSRFEG00010004798	L1CAM (ENSRFEG00010004838)	PDZD4 (ENSRFEG00010004912)	SSR4 (ENSRFEG00010004934)
Microbat	MODERN SPECIES	977	PDZD4 (ENSMLUG00000004464)	L1CAM (ENSMLUG00000014234)	AVPR2 (ENSMLUG00000014253)	ARHGAP4 (ENSMLUG00000014257)	NAA10 (ENSMLUG00000014267)	RENBP (ENSMLUG00000014271)	HCFC1 (ENSMLUG00000014275)	TMEM187 (ENSMLUG00000014286) #37	IRAK1 (ENSMLUG00000014288) #36	MECP2 (ENSMLUG00000014297) #35	ENSMLUG00000024727	ENSMLUG00000014299 #34	TEX28 (ENSMLUG00000014304) #33	TKTL1 (ENSMLUG00000014306) #32	EMD (ENSMLUG00000005200)	FLNA (ENSMLUG00000014316) #22	ENSMLUG00000014337 #23	DNASE1L1 (ENSMLUG00000014342) #24	TAFAZZIN (ENSMLUG00000024037) #25	ATP6AP1 (ENSMLUG00000003493) #26	ENSMLUG00000022234	GDI1 (ENSMLUG00000003501) #27	PLXNA3 (ENSMLUG00000010006) #28	ENSMLUG00000030030 #29	UBL4A (ENSMLUG00000027145) #30	SLC10A3 (ENSMLUG00000008199) #31	FAM3A (ENSMLUG00000005226)	G6PD (ENSMLUG00000008210)	IKBKG (ENSMLUG00000027075)	ENSMLUG00000025335
Megabat	MODERN SPECIES	3437															EMD (ENSPVAG00000003741)	FLNA (ENSPVAG00000003735) #22	ENSPVAG00000003734
Artiodactyla	ANCESTRAL SPECIES	9	ENSGT01050000244815.B.a.a	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b
Suina	ANCESTRAL SPECIES	7	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00910000146917	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.A	ENSGT01050000244850.A.a #28	ENSGT00410000025802.g.a.f #29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT00410000025802.g.b ##29
Pig	MODERN SPECIES	300	PDZD4 (ENSSSCG00000012785)	L1CAM (ENSSSCG00000012787)	AVPR2 (ENSSSCG00000012789)	ARHGAP4 (ENSSSCG00000012790)	NAA10 (ENSSSCG00000012791)	RENBP (ENSSSCG00000012792)	HCFC1 (ENSSSCG00000012793)	ENSSSCG00000050581 #37	IRAK1 (ENSSSCG00000012795) #36	ENSSSCG00000059337	MECP2 (ENSSSCG00000034742) #35	ENSSSCG00000029523 #34	TEX28 (ENSSSCG00000029513) #33	TKTL1 (ENSSSCG00000029443) #32	EMD (ENSSSCG00000037777)	FLNA (ENSSSCG00000033299) #22	RPL10 (ENSSSCG00000035997) #23	DNASE1L1 (ENSSSCG00000037032) #24	TAFAZZIN (ENSSSCG00000039655) #25	ATP6AP1 (ENSSSCG00000037310) #26	GDI1 (ENSSSCG00000030421) #27	FAM50A (ENSSSCG00000025303)	PLXNA3 (ENSSSCG00000023483) #28	ENSSSCG00000032959 #29	ENSSSCG00000057536 #30	SLC10A3 (ENSSSCG00000025766) #31	FAM3A (ENSSSCG00000028934)	G6PD (ENSSSCG00000025108)	IKBKG (ENSSSCG00000012825)	ENSSSCG00000012827	ENSSSCG00000049540 ##29
Artiodactyla_a	ANCESTRAL SPECIES	9	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b
Camelidae	ANCESTRAL SPECIES	80					ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00910000146917	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Arabian camel	MODERN SPECIES	204	ENSCDRG00005016563 ##29	ENSCDRG00005016521 ##29	ENSCDRG00005016489	IKBKG (ENSCDRG00005016363)	G6PD (ENSCDRG00005016281)	FAM3A (ENSCDRG00005016065)	SLC10A3 (ENSCDRG00005016014) #31	LAGE3 (ENSCDRG00005015984) #29	FAM50A (ENSCDRG00005012822)	GDI1 (ENSCDRG00005012702) #27	ATP6AP1 (ENSCDRG00005012618) #26	TAZ (ENSCDRG00005012375) #25	DNASE1L1 (ENSCDRG00005012179) #24	ENSCDRG00005012077 #23	ENSCDRG00005011914	FLNA (ENSCDRG00005011684) #22	TKTL1 (ENSCDRG00005011584) #32	TEX28 (ENSCDRG00005011542) #33	ENSCDRG00005011483 #34	MECP2 (ENSCDRG00005011374) #35	ENSCDRG00005011350	IRAK1 (ENSCDRG00005011306) #36	TMEM187 (ENSCDRG00005011270) #37	HCFC1 (ENSCDRG00005010537)	RENBP (ENSCDRG00005010267)	NAA10 (ENSCDRG00005010090)	ARHGAP4 (ENSCDRG00005009571)	AVPR2 (ENSCDRG00005009433)	L1CAM (ENSCDRG00005008678)	PDZD4 (ENSCDRG00005008529)	SSR4 (ENSCDRG00005008385)
Artiodactyla_b	ANCESTRAL SPECIES	19	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Cetacea	ANCESTRAL SPECIES	19	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.n	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Odontoceti	ANCESTRAL SPECIES	19	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Odontoceti_a	ANCESTRAL SPECIES	21	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034.i	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00910000146500	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992
Odontoceti_b	ANCESTRAL SPECIES	17	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034.i	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Monodontidae	ANCESTRAL SPECIES	19	ENSGT00960000186859	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A.m	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b #23	ENSGT00390000002034.i	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a	ENSGT00940000157877.b	ENSGT01020000230394.e.a.a.b.a.b
Beluga whale	MODERN SPECIES	139	ENSDLEG00000011545	ENSDLEG00000011523	IKBKG (ENSDLEG00000011500)	G6PD (ENSDLEG00000011468)	FAM3A (ENSDLEG00000011447)	UBL4A (ENSDLEG00000011413) #31	LAGE3 (ENSDLEG00000011398) #29	PLXNA3 (ENSDLEG00000011331) #28	FAM50A (ENSDLEG00000011270)	GDI1 (ENSDLEG00000011245) #27	ATP6AP1 (ENSDLEG00000011212) #26	TAZ (ENSDLEG00000011183) #25	DNASE1L1 (ENSDLEG00000011154) #24	ENSDLEG00000011125 #23	EMD (ENSDLEG00000011102)	FLNA (ENSDLEG00000010999) #22	TKTL1 (ENSDLEG00000010974) #32	ENSDLEG00000010916 #34	MECP2 (ENSDLEG00000010908) #35	IRAK1 (ENSDLEG00000010892) #36	TMEM187 (ENSDLEG00000010884) #37	HCFC1 (ENSDLEG00000010826)	RENBP (ENSDLEG00000010782)	ARHGAP4 (ENSDLEG00000010745)	AVPR2 (ENSDLEG00000010715)	L1CAM (ENSDLEG00000010633)	PDZD4 (ENSDLEG00000010618)	SSR4 (ENSDLEG00000010578)	IDH3G (ENSDLEG00000010539)	SRPK3 (ENSDLEG00000009748)	PLXNB3 (ENSDLEG00000009548)
Narwhal	MODERN SPECIES	309	IKBKG (ENSMMNG00015013582)	G6PD (ENSMMNG00015013556)	FAM3A (ENSMMNG00015013509)	SLC10A3 (ENSMMNG00015013481) #31	UBL4A (ENSMMNG00015013467) #30	LAGE3 (ENSMMNG00015013456) #29	PLXNA3 (ENSMMNG00015013425) #28	ENSMMNG00015013390	GDI1 (ENSMMNG00015013359) #27	ATP6AP1 (ENSMMNG00015013337) #26	ENSMMNG00015013329	ENSMMNG00015013313 #25	DNASE1L1 (ENSMMNG00015013295) #24	ENSMMNG00015013277 #23	ENSMMNG00015013213	FLNA (ENSMMNG00015013139) #22	TKTL1 (ENSMMNG00015013076) #32	ENSMMNG00015013056	ENSMMNG00015013048	ENSMMNG00015013034 #34	MECP2 (ENSMMNG00015012982) #35	IRAK1 (ENSMMNG00015012947) #36	TMEM187 (ENSMMNG00015012935) #37	HCFC1 (ENSMMNG00015012895)	RENBP (ENSMMNG00015012853)	ARHGAP4 (ENSMMNG00015012794)	AVPR2 (ENSMMNG00015012757)	L1CAM (ENSMMNG00015012599)	PDZD4 (ENSMMNG00015012532)	SSR4 (ENSMMNG00015012518)	IDH3G (ENSMMNG00015012488)
Vaquita	MODERN SPECIES	34	ENSPSNG00000022414	ENSPSNG00000022407	IKBKG (ENSPSNG00000022395)	G6PD (ENSPSNG00000022382)	FAM3A (ENSPSNG00000022374)	SLC10A3 (ENSPSNG00000022364) #31	ENSPSNG00000022354 #29	PLXNA3 (ENSPSNG00000022341) #28	ENSPSNG00000022331	GDI1 (ENSPSNG00000022323) #27	ATP6AP1 (ENSPSNG00000022314) #26	TAFAZZIN (ENSPSNG00000022306) #25	DNASE1L1 (ENSPSNG00000022297) #24	ENSPSNG00000022280 #23	ENSPSNG00000022266	FLNA (ENSPSNG00000022089) #22	TKTL1 (ENSPSNG00000021994) #32	ENSPSNG00000021965	ENSPSNG00000021951	ENSPSNG00000021942	ENSPSNG00000021927	TEX28 (ENSPSNG00000021914) #33	ENSPSNG00000021893 #34	MECP2 (ENSPSNG00000021858) #35	IRAK1 (ENSPSNG00000021819) #36	TMEM187 (ENSPSNG00000021804) #37	HCFC1 (ENSPSNG00000021713)	ENSPSNG00000021660	NAA10 (ENSPSNG00000021621)	ARHGAP4 (ENSPSNG00000021560)	AVPR2 (ENSPSNG00000021500)
Dolphin	MODERN SPECIES	2778															EMD (ENSTTRG00000013924)	FLNA (ENSTTRG00000013919) #22	TKTL1 (ENSTTRG00000013914) #32
Sperm whale	MODERN SPECIES	13	MPP1 (ENSPCTG00005014958) #19	DKC1 (ENSPCTG00005014862) #18	GAB3 (ENSPCTG00005014727) #17	ENSPCTG00005014674 ##29	IKBKG (ENSPCTG00005014430)	GDI1 (ENSPCTG00005014385) #27	FAM50A (ENSPCTG00005014324)	PLXNA3 (ENSPCTG00005014209) #28	ENSPCTG00005014136 #29	UBL4A (ENSPCTG00005014090) #30	SLC10A3 (ENSPCTG00005014048) #31	FAM3A (ENSPCTG00005013803)	DNASE1L1 (ENSPCTG00005013759) #24	RPL10 (ENSPCTG00005013674) #23	EMD (ENSPCTG00005013517)	FLNA (ENSPCTG00005012993) #22	TKTL1 (ENSPCTG00005012476) #32	ENSPCTG00005022081	TEX28 (ENSPCTG00005022073) #33	ENSPCTG00005022067 #34	MECP2 (ENSPCTG00005022045) #35	ENSPCTG00005022009 #36	HCFC1 (ENSPCTG00005021915)	RENBP (ENSPCTG00005021884)	NAA10 (ENSPCTG00005021859)	ARHGAP4 (ENSPCTG00005021658)	AVPR2 (ENSPCTG00005021602)	L1CAM (ENSPCTG00005021438)	PDZD4 (ENSPCTG00005021324)	SSR4 (ENSPCTG00005021260)	IDH3G (ENSPCTG00005021222)
Blue whale	MODERN SPECIES	40	G6PD (ENSBMSG00010021326)	FAM3A (ENSBMSG00010021308)	SLC10A3 (ENSBMSG00010021301) #31	UBL4A (ENSBMSG00010021291) #30	LAGE3 (ENSBMSG00010021278) #29	PLXNA3 (ENSBMSG00010021267) #28	ENSBMSG00010021250	GDI1 (ENSBMSG00010021239) #27	ATP6AP1 (ENSBMSG00010021220) #26	TAFAZZIN (ENSBMSG00010021182) #25	DNASE1L1 (ENSBMSG00010021173) #24	ENSBMSG00010021148 #23	ENSBMSG00010021119 #32	ENSBMSG00010021096 #32	EMD (ENSBMSG00010021072)	FLNA (ENSBMSG00010020850) #22	ENSBMSG00010020592 #32	TEX28 (ENSBMSG00010020541) #33	ENSBMSG00010020090 #34	MECP2 (ENSBMSG00010019964) #35	IRAK1 (ENSBMSG00010019854) #36	TMEM187 (ENSBMSG00010019836) #37	HCFC1 (ENSBMSG00010019528)	RENBP (ENSBMSG00010019364)	NAA10 (ENSBMSG00010019439)	ARHGAP4 (ENSBMSG00010018853)	AVPR2 (ENSBMSG00010018770)	L1CAM (ENSBMSG00010018510)	PDZD4 (ENSBMSG00010018349)	SSR4 (ENSBMSG00010018296)	IDH3G (ENSBMSG00010018140)
Pecora	ANCESTRAL SPECIES	38	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.a.a #23	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Yarkand deer	MODERN SPECIES	1323	ENSCHYG00000018338	ENSCHYG00000018655 ##12	MTCP1 (ENSCHYG00000018801) #13	CMC4 (ENSCHYG00000018917) #14	FUNDC2 (ENSCHYG00000018987) ##15	F8 (ENSCHYG00000019104) #21	ENSCHYG00000020059	MPP1 (ENSCHYG00000020123) #19	DKC1 (ENSCHYG00000020555) #18	GAB3 (ENSCHYG00000020865) #17	ENSCHYG00000021132 ##29	ENSCHYG00000021194	ENSCHYG00000021240 ##29	ENSCHYG00000021269	ENSCHYG00000021292	FLNA (ENSCHYG00000021422) #22	ENSCHYG00000022474 #23	DNASE1L1 (ENSCHYG00000022608) #24	TAFAZZIN (ENSCHYG00000022770) #25	ATP6AP1 (ENSCHYG00000023535) #26	GDI1 (ENSCHYG00000023645) #27	PLXNA3 (ENSCHYG00000023890) #28	LAGE3 (ENSCHYG00000024139) #29	ENSCHYG00000024202	G6PD (ENSCHYG00000024413)	IKBKG (ENSCHYG00000024518)	EMD (ENSCHYG00000024666)	TKTL1 (ENSCHYG00000024748) #32	TEX28 (ENSCHYG00000024783) #33	ENSCHYG00000024807 #34	MECP2 (ENSCHYG00000024843) #35
Percora_a	ANCESTRAL SPECIES	35	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.a.a #23	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Bovidae	ANCESTRAL SPECIES	33	ENSGT01030000235238.f	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Bovinae	ANCESTRAL SPECIES	46	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Bos	ANCESTRAL SPECIES	36	ENSGT00530000063808.a	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Bos_b	ANCESTRAL SPECIES	31	ENSGT00530000063808.a	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.b #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Cow	MODERN SPECIES	177	IKBKG (ENSBTAG00000006268)	ENSBTAG00000053534	G6PD (ENSBTAG00000019512)	FAM3A (ENSBTAG00000012747)	SLC10A3 (ENSBTAG00000014333) #31	UBL4A (ENSBTAG00000014331) #30	LAGE3 (ENSBTAG00000054868) #29	PLXNA3 (ENSBTAG00000008552) #28	FAM50A (ENSBTAG00000033032)	GDI1 (ENSBTAG00000012125) #27	ATP6AP1 (ENSBTAG00000012117) #26	TAFAZZIN (ENSBTAG00000007456) #25	DNASE1L1 (ENSBTAG00000007455) #24	RPL10 (ENSBTAG00000007454) ##23	EMD (ENSBTAG00000022314)	FLNA (ENSBTAG00000011190) #22	TKTL1 (ENSBTAG00000020127) #32	TEX28 (ENSBTAG00000020300) #33	OPN1LW (ENSBTAG00000020299) #34	ENSBTAG00000052492	MECP2 (ENSBTAG00000047855) #35	IRAK1 (ENSBTAG00000016085) #36	TMEM187 (ENSBTAG00000008278) #37	HCFC1 (ENSBTAG00000011904)	RENBP (ENSBTAG00000047827)	NAA10 (ENSBTAG00000047702)	ARHGAP4 (ENSBTAG00000047531)	AVPR2 (ENSBTAG00000047138)	L1CAM (ENSBTAG00000013462)	ENSBTAG00000038379	PDZD4 (ENSBTAG00000021422)
Hybrid Bos Indicus	MODERN SPECIES	315	ENSBIXG00005000250	IKBKG (ENSBIXG00005014233)	G6PD (ENSBIXG00005014158)	ENSBIXG00005014028	SLC10A3 (ENSBIXG00005013999) #31	ENSBIXG00005013979 #30	LAGE3 (ENSBIXG00005006122) #29	PLXNA3 (ENSBIXG00005013935) #28	FAM50A (ENSBIXG00005013872)	GDI1 (ENSBIXG00005001727) #27	ATP6AP1 (ENSBIXG00005001714) #26	ENSBIXG00005013746 #25	DNASE1L1 (ENSBIXG00005005490) #24	ENSBIXG00005001627 #23	EMD (ENSBIXG00005013423)	FLNA (ENSBIXG00005013367) #22	TKTL1 (ENSBIXG00005013244) #32	TEX28 (ENSBIXG00005013213) #33	ENSBIXG00005013198 #34	MECP2 (ENSBIXG00005013169) #35	ENSBIXG00005013100	IRAK1 (ENSBIXG00005013081) #36	TMEM187 (ENSBIXG00005013053) #37	HCFC1 (ENSBIXG00005013025)	RENBP (ENSBIXG00005007005)	NAA10 (ENSBIXG00005012916)	ARHGAP4 (ENSBIXG00005001429)	AVPR2 (ENSBIXG00005012700)	L1CAM (ENSBIXG00005012618)	ENSBIXG00005012493	PDZD4 (ENSBIXG00005012442)
Bos_a	ANCESTRAL SPECIES	39	ENSGT00410000025802.g.b ##29	ENSGT00530000063808.a	ENSGT01100000263481.n.a.b.b.a.a.b.b	ENSGT00530000063435.a	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.a ##23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Wild yak	MODERN SPECIES	1752															EMD (ENSBMUG00000013856)	FLNA (ENSBMUG00000013711) #22
Domestic yak	MODERN SPECIES	69	ENSBGRG00000026304 ##29	IKBKG (ENSBGRG00000026284)	ENSBGRG00000026272	G6PD (ENSBGRG00000026248)	SLC10A3 (ENSBGRG00000026237) #31	UBL4A (ENSBGRG00000026234) #30	ENSBGRG00000026228 #29	PLXNA3 (ENSBGRG00000024820) #28	FAM50A (ENSBGRG00000024395)	ATP6AP1 (ENSBGRG00000024299) #26	TAFAZZIN (ENSBGRG00000024079) #25	DNASE1L1 (ENSBGRG00000024010) #24	ENSBGRG00000023896 ##23	EMD (ENSBGRG00000023778)	GDI1 (ENSBGRG00000023696) #27	FLNA (ENSBGRG00000023487) #22	TKTL1 (ENSBGRG00000023403) #32	ENSBGRG00000023305 #34	MECP2 (ENSBGRG00000023220) #35	IRAK1 (ENSBGRG00000023042) #36	TMEM187 (ENSBGRG00000023012) #37	HCFC1 (ENSBGRG00000021965)	RENBP (ENSBGRG00000021852)	NAA10 (ENSBGRG00000021764)	ARHGAP4 (ENSBGRG00000021595)	AVPR2 (ENSBGRG00000021537)	L1CAM (ENSBGRG00000020974)	ENSBGRG00000020944	PDZD4 (ENSBGRG00000020897)	ENSBGRG00000020770	IDH3G (ENSBGRG00000020629)
American bison	MODERN SPECIES	2029																ENSBBBG00000007833 #22
Caprinae	ANCESTRAL SPECIES	45		ENSGT00530000063808.a	ENSGT00530000063435.a	ENSGT00950000183004.a.a.a.b	ENSGT00950000182808.b.b #31	ENSGT00730000111022 #30	ENSGT00410000025802.g.a #29	ENSGT01050000244850.A.a #28	ENSGT00390000004735.A	ENSGT00950000182994.B.a.a.a #27	ENSGT00940000156650 #26	ENSGT00390000018621 #25	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000003897.s.b.a.a.b.a.a #23	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00940000162426 #32	ENSGT00940000162843 #33	ENSGT01030000234549.a.a.a.b #34	ENSGT00530000063687.b.b.b #35	ENSGT00940000160502 #36	ENSGT00390000011272 #37	ENSGT00940000161383	ENSGT00390000013740	ENSGT00550000074803	ENSGT00950000182824.a.b.b	ENSGT01050000244882.b.c.b	ENSGT00940000157506	ENSGT00950000183062.a.b	ENSGT00390000008992	ENSGT00950000182989.D.a.a.g.a
Rambouillet Sheep	MODERN SPECIES	205	ENSOARG00020018703	ENSOARG00020018745 ##29	ENSOARG00020018798 #29	IKBKG (ENSOARG00020018901)	G6PD (ENSOARG00020019292)	SLC10A3 (ENSOARG00020019833) #31	UBL4A (ENSOARG00020019884) #30	PLXNA3 (ENSOARG00020019933) #28	FAM50A (ENSOARG00020020129)	GDI1 (ENSOARG00020020178) #27	ATP6AP1 (ENSOARG00020020475) #26	TAFAZZIN (ENSOARG00020020574) #25	DNASE1L1 (ENSOARG00020021378) #24	RPL10 (ENSOARG00020021458) #23	EMD (ENSOARG00020021549)	FLNA (ENSOARG00020021631) #22	TKTL1 (ENSOARG00020021994) #32	OPN1LW (ENSOARG00020022140) #34	MECP2 (ENSOARG00020022209) #35	IRAK1 (ENSOARG00020022349) #36	TMEM187 (ENSOARG00020022375) #37	HCFC1 (ENSOARG00020022415)	RENBP (ENSOARG00020023053)	NAA10 (ENSOARG00020023246)	ARHGAP4 (ENSOARG00020023326)	AVPR2 (ENSOARG00020023848)	L1CAM (ENSOARG00020023921)	PDZD4 (ENSOARG00020024315)	SSR4 (ENSOARG00020024383)	IDH3G (ENSOARG00020024407)	PLXNB3 (ENSOARG00020024564)
Goat	MODERN SPECIES	94															EMD (ENSCHIG00000022498)	FLNA (ENSCHIG00000011282) #22	ENSCHIG00000020606 #33	TKTL1 (ENSCHIG00000006118) #32	ENSCHIG00000015283 #34
Siberian musk deer	MODERN SPECIES	14	IDH3G (ENSMMSG00000016400)	SSR4 (ENSMMSG00000016336)	PDZD4 (ENSMMSG00000016210)	L1CAM (ENSMMSG00000015717)	AVPR2 (ENSMMSG00000015654)	ARHGAP4 (ENSMMSG00000015607)	NAA10 (ENSMMSG00000015542)	RENBP (ENSMMSG00000015497)	HCFC1 (ENSMMSG00000015453)	TMEM187 (ENSMMSG00000015428) #37	IRAK1 (ENSMMSG00000015351) #36	ENSMMSG00000015287 #35	ENSMMSG00000015261 #34	TEX28 (ENSMMSG00000015249) #33	TKTL1 (ENSMMSG00000015211) #32	FLNA (ENSMMSG00000014357) #22	EMD (ENSMMSG00000014247)	ENSMMSG00000014213 #23	ENSMMSG00000014152 #24	TAFAZZIN (ENSMMSG00000014064) #25	ATP6AP1 (ENSMMSG00000014033) #26	GDI1 (ENSMMSG00000013993) #27	ENSMMSG00000013933	PLXNA3 (ENSMMSG00000013876) #28	LAGE3 (ENSMMSG00000013858) #29	UBL4A (ENSMMSG00000013839) #30	SLC10A3 (ENSMMSG00000013825) #31	ENSMMSG00000013656	G6PD (ENSMMSG00000013593)	IKBKG (ENSMMSG00000013522)	ENSMMSG00000013493 ##29
Atlantogenata	ANCESTRAL SPECIES	70	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802.h ##29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j
Xenarthra	ANCESTRAL SPECIES	103					ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT00940000162843 #33	ENSGT00940000162426 #32	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.a.b.b ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a
Armadillo	MODERN SPECIES	4500					ARHGAP4 (ENSDNOG00000048684)	NAA10 (ENSDNOG00000030734)	RENBP (ENSDNOG00000024828)	ENSDNOG00000043559	HCFC1 (ENSDNOG00000047555)	TMEM187 (ENSDNOG00000003232) #37	IRAK1 (ENSDNOG00000014412) #36	MECP2 (ENSDNOG00000013419) #35	TEX28 (ENSDNOG00000018401) #33	TKTL1 (ENSDNOG00000024515) #32	EMD (ENSDNOG00000048541)	FLNA (ENSDNOG00000037289) #22	ENSDNOG00000037062 ##23	DNASE1L1 (ENSDNOG00000045597) #24	TAFAZZIN (ENSDNOG00000049167) #25	ATP6AP1 (ENSDNOG00000015526) #26	GDI1 (ENSDNOG00000040963) #27	ENSDNOG00000041781	PLXNA3 (ENSDNOG00000025707) #28	UBL4A (ENSDNOG00000002769) #30	SLC10A3 (ENSDNOG00000035600) #31	FAM3A (ENSDNOG00000006532)	G6PD (ENSDNOG00000010727)	IKBKG (ENSDNOG00000010758)
Afrotheria	ANCESTRAL SPECIES	82	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT00940000162426 #32	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802.h ##29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j
Tenrec	MODERN SPECIES	6112																FLNA (ENSETEG00000014621) #22
Afrotheria_a	ANCESTRAL SPECIES	81	ENSGT00390000008992	ENSGT00950000183062.a.b	ENSGT00940000157506	ENSGT01050000244882.b.c.b	ENSGT00950000182824.a.b.b	ENSGT00550000074803	ENSGT00390000013740	ENSGT00940000166196	ENSGT00940000161383	ENSGT00390000011272 #37	ENSGT00940000160502 #36	ENSGT00530000063687.b.b.b #35	ENSGT01030000234549.a.a.a.b #34	ENSGT00940000162843 #33	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.a ##23	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650 #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00410000025802.h ##29	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT01050000244815.B.a.a	ENSGT01100000263574.b.j
Hyrax	MODERN SPECIES	6806															EMD (ENSPCAG00000013274)	FLNA (ENSPCAG00000012976) #22
Elephant	MODERN SPECIES	50	L1CAM (ENSLAFG00000021925)	AVPR2 (ENSLAFG00000027738)	ARHGAP4 (ENSLAFG00000014809)	NAA10 (ENSLAFG00000007025)	RENBP (ENSLAFG00000007027)	ENSLAFG00000028984	HCFC1 (ENSLAFG00000004418)	TMEM187 (ENSLAFG00000003455) #37	IRAK1 (ENSLAFG00000016212) #36	MECP2 (ENSLAFG00000016292) #35	ENSLAFG00000027266	ENSLAFG00000010311 #34	ENSLAFG00000005142 #33	ENSLAFG00000005145	EMD (ENSLAFG00000005993)	FLNA (ENSLAFG00000006359) #22	ENSLAFG00000031860 ##23	DNASE1L1 (ENSLAFG00000003498) #24	TAFAZZIN (ENSLAFG00000003502) #25	ATP6AP1 (ENSLAFG00000008757) #26	GDI1 (ENSLAFG00000008761) #27	ENSLAFG00000008766	PLXNA3 (ENSLAFG00000031276) #28	ENSLAFG00000016044 ##29	UBL4A (ENSLAFG00000022192) #30	SLC10A3 (ENSLAFG00000011108) #31	FAM3A (ENSLAFG00000032131)	G6PD (ENSLAFG00000010694)	IKBKG (ENSLAFG00000026529)	ENSLAFG00000010146	ENSLAFG00000028603
Marsupialia	ANCESTRAL SPECIES	39															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650.g.b #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C	ENSGT01050000244850.A.a #28	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00940000165180	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a.g
Marsupialia_b	ANCESTRAL SPECIES	35															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.d.b #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650.g.b #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C.e.a	ENSGT01050000244850.A.a #28	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00940000165180	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a.g
Diprotodontia	ANCESTRAL SPECIES	79															ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.d.b #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650.g.b.a #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C.e.a	ENSGT01050000244850.A.a #28	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00940000165180	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a.g
Diprotodontia_a	ANCESTRAL SPECIES	74												ENSGT00390000013558.f	ENSGT00940000164911	ENSGT00950000182965.a.b.b.a.a.a.b.a.b.a.b	ENSGT00390000002034	ENSGT00940000153588.b #22	ENSGT00390000003897.s.b.d.b.a #23	ENSGT00950000182846.a.a.a.a.b ##24	ENSGT00950000182846.a.a.a.a.a #24	ENSGT00390000018621 #25	ENSGT00940000156650.g.b.a #26	ENSGT00950000182994.B.a.a.a #27	ENSGT00390000004735.C.e.a.b	ENSGT01050000244850.A.a #28	ENSGT00730000111022 #30	ENSGT00950000182808.b.b #31	ENSGT00950000183004.a.a.a.b	ENSGT00940000165180	ENSGT00530000063435.a	ENSGT00530000063808.a	ENSGT00390000000950.c.a.g
Common wonbat	MODERN SPECIES	1065										ENSVURG00010018460	ENSVURG00010018501	ENSVURG00010018504	ENSVURG00010018533	ENSVURG00010018641	ENSVURG00010018644	FLNA (ENSVURG00010018669) #22	ENSVURG00010018760	ENSVURG00010018778 #23	DNASE1L1 (ENSVURG00010018801) #24	TAFAZZIN (ENSVURG00010018809) #25	ENSVURG00010018815 #26	GDI1 (ENSVURG00010018825) #27	ENSVURG00010018834	PLXNA3 (ENSVURG00010018841) #28	UBL4A (ENSVURG00010018854) #30	SLC10A3 (ENSVURG00010018859) #31	FAM3A (ENSVURG00010018864)	ENSVURG00010018900	G6PD (ENSVURG00010019009)	IKBKG (ENSVURG00010019077)	ENSVURG00010019093
koala	MODERN SPECIES	275											ENSPCIG00000034683	ENSPCIG00000001851	ENSPCIG00000022856	ENSPCIG00000022816	ENSPCIG00000010081	FLNA (ENSPCIG00000026358) #22	ENSPCIG00000026904 #23	ENSPCIG00000026917 ##24	ENSPCIG00000026928 #24	ENSPCIG00000026938	TAFAZZIN (ENSPCIG00000026941) #25	ENSPCIG00000026944 #26	GDI1 (ENSPCIG00000026947) #27	ENSPCIG00000027040	ENSPCIG00000036166 #28	ENSPCIG00000036040 #28	ENSPCIG00000027128 #30	SLC10A3 (ENSPCIG00000027130) #31	FAM3A (ENSPCIG00000027132)	ENSPCIG00000009019	G6PD (ENSPCIG00000003610)
Wallaby	MODERN SPECIES	9684																FLNA (ENSMEUG00000004236) #22
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000000292	ENSSHAG00000000566	ENSSHAG00000027267	ENSSHAG00000030188	ENSSHAG00000027722	ENSSHAG00000029117	ENSSHAG00000003075	ENSSHAG00000002186	ENSSHAG00000027640	ENSSHAG00000002700	ENSSHAG00000029755	ENSSHAG00000024707	ENSSHAG00000001750	ENSSHAG00000024989	ENSSHAG00000003040	ENSSHAG00000001055 #22	ENSSHAG00000022273 ##23	ENSSHAG00000004015 ##24	ENSSHAG00000001595 #24	ENSSHAG00000030741 #25	ENSSHAG00000005317 #26	GDI1 (ENSSHAG00000023206) #27	ENSSHAG00000005773	PLXNA3 (ENSSHAG00000006328) #28	ENSSHAG00000032311 #30	SLC10A3 (ENSSHAG00000027798) #31	FAM3A (ENSSHAG00000021982)	G6PD (ENSSHAG00000002307)	IKBKG (ENSSHAG00000003200)	ENSSHAG00000004297	ENSSHAG00000004769
Opossum	MODERN SPECIES	627															ENSMODG00000025437	FLNA (ENSMODG00000008710) #22	ENSMODG00000008731 ##23	ENSMODG00000008752 ##24	ENSMODG00000008763 #24	TAFAZZIN (ENSMODG00000008851) #25	ENSMODG00000008869 #26	GDI1 (ENSMODG00000008798) #27	PLXNA3 (ENSMODG00000008980) #28	ENSMODG00000008997 #30	SLC10A3 (ENSMODG00000009006) #31	FAM3A (ENSMODG00000009016)	ENSMODG00000009130	G6PD (ENSMODG00000009154)	IKBKG (ENSMODG00000009175)	ENSMODG00000039236	ENSMODG00000009196
Platypus	MODERN SPECIES	17	ARHGAP4 (ENSOANG00000005180)	NAA10 (ENSOANG00000002893)	RENBP (ENSOANG00000002892)	ENSOANG00000041748	HCFC1 (ENSOANG00000005871)	TMEM187 (ENSOANG00000016003) #37	IRAK1 (ENSOANG00000011027) #36	ENSOANG00000040139 #35	ENSOANG00000037077 ##34	OPN1LW (ENSOANG00000011023) #34	ENSOANG00000045052 #33	TKTL2 (ENSOANG00000045224)	ENSOANG00000011020	ENSOANG00000011019	ENSOANG00000036188	FLNA (ENSOANG00000011016) #22	ENSOANG00000011015 ##23	ENSOANG00000011014 ##24	ENSOANG00000049949 #24	TAFAZZIN (ENSOANG00000012765) #25	ENSOANG00000050800 #26	GDI1 (ENSOANG00000042523) #27	ENSOANG00000004116	PLXNA3 (ENSOANG00000007979) #28	UBL4A (ENSOANG00000048880) #30	SLC10A3 (ENSOANG00000043297) #31	FAM3A (ENSOANG00000047703)	ENSOANG00000011544	ENSOANG00000000366	G6PD (ENSOANG00000000365)	IKBKG (ENSOANG00000000364)