Amniota	ANCESTRAL SPECIES	23	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.b	ENSGT00390000018044.b.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34
Mammalia	ANCESTRAL SPECIES	61	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.B ##36	ENSGT01030000234559.a.a.a #37
Theria	ANCESTRAL SPECIES	41	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.B ##36	ENSGT01030000234559.a.a.a #37
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Primates	ANCESTRAL SPECIES	18	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Mouse lemur	MODERN SPECIES	16	PLIN4 (ENSMICG00000028930) #7	HDGFL2 (ENSMICG00000000325) #8	UBXN6 (ENSMICG00000033666) #9	CHAF1A (ENSMICG00000000323) #10	SH3GL1 (ENSMICG00000000322) #11	MPND (ENSMICG00000038621) #12	STAP2 (ENSMICG00000028853) #13	FSD1 (ENSMICG00000000316) #14	TMIGD2 (ENSMICG00000045375) #15	SHD (ENSMICG00000000315) #16	YJU2 (ENSMICG00000030928) #17	EBI3 (ENSMICG00000042883) #18	ANKRD24 (ENSMICG00000001612) #19	SIRT6 (ENSMICG00000003439) #20	CREB3L3 (ENSMICG00000034622) #21	MAP2K2 (ENSMICG00000028081) #22	ZBTB7A (ENSMICG00000030503) #23	PIAS4 (ENSMICG00000012799) #24	EEF2 (ENSMICG00000012772) #25	DAPK3 (ENSMICG00000046071) #26	NMRK2 (ENSMICG00000037967) #27	ATCAY (ENSMICG00000004504) #28	ZFR2 (ENSMICG00000045224) #29	MATK (ENSMICG00000014774) #30	RAX2 (ENSMICG00000014768) #31	MRPL54 (ENSMICG00000034581) #32	APBA3 (ENSMICG00000014756) #33	TJP3 (ENSMICG00000014731) #34	PIP5K1C (ENSMICG00000028246) #35	CACTIN (ENSMICG00000008291) #36	TBXA2R (ENSMICG00000031426) #37
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Coquerels sifaka	MODERN SPECIES	348	ENSPCOG00000021711 #7	HDGFL2 (ENSPCOG00000009336) #8	UBXN6 (ENSPCOG00000027732) #9	CHAF1A (ENSPCOG00000024961) #10	SH3GL1 (ENSPCOG00000025140) #11	MPND (ENSPCOG00000014436) #12	STAP2 (ENSPCOG00000021854) #13	FSD1 (ENSPCOG00000023842) #14	TMIGD2 (ENSPCOG00000022704) #15	SHD (ENSPCOG00000023655) #16	YJU2 (ENSPCOG00000017988) #17	EBI3 (ENSPCOG00000022898) #18	ANKRD24 (ENSPCOG00000012089) #19	SIRT6 (ENSPCOG00000028709) #20	CREB3L3 (ENSPCOG00000017862) #21	MAP2K2 (ENSPCOG00000004497) #22	ZBTB7A (ENSPCOG00000027776) #23	PIAS4 (ENSPCOG00000004662) #24	EEF2 (ENSPCOG00000023522) #25	DAPK3 (ENSPCOG00000023275) #26	NMRK2 (ENSPCOG00000022831) #27	ATCAY (ENSPCOG00000027482) #28	ZFR2 (ENSPCOG00000016923) #29	MATK (ENSPCOG00000018010) #30	RAX2 (ENSPCOG00000022891) #31	MRPL54 (ENSPCOG00000027550) #32	APBA3 (ENSPCOG00000026721) #33	TJP3 (ENSPCOG00000020238) #34	PIP5K1C (ENSPCOG00000021588) #35	CACTIN (ENSPCOG00000015989) #36	TBXA2R (ENSPCOG00000015698) #37
Greater bamboo lemur	MODERN SPECIES	916	HDGFL2 (ENSPSMG00000019994) #8	UBXN6 (ENSPSMG00000019891) #9	CHAF1A (ENSPSMG00000019830) #10	SH3GL1 (ENSPSMG00000019735) #11	MPND (ENSPSMG00000019676) #12	STAP2 (ENSPSMG00000019657) #13	FSD1 (ENSPSMG00000019636) #14	ENSPSMG00000019578	SHD (ENSPSMG00000019570) #16	ENSPSMG00000019546 #16	YJU2 (ENSPSMG00000019539) #17	EBI3 (ENSPSMG00000019525) #18	ANKRD24 (ENSPSMG00000019514) #19	SIRT6 (ENSPSMG00000019501) #20	CREB3L3 (ENSPSMG00000019448) #21	MAP2K2 (ENSPSMG00000019412) #22	ZBTB7A (ENSPSMG00000019360) #23	PIAS4 (ENSPSMG00000019356) #24	EEF2 (ENSPSMG00000019307) #25	DAPK3 (ENSPSMG00000019258) #26	NMRK2 (ENSPSMG00000019248) #27	ATCAY (ENSPSMG00000019230) #28	ZFR2 (ENSPSMG00000019220) #29	MATK (ENSPSMG00000019201) #30	RAX2 (ENSPSMG00000019159) #31	MRPL54 (ENSPSMG00000019157) #32	APBA3 (ENSPSMG00000019152) #33	TJP3 (ENSPSMG00000019146) #34	PIP5K1C (ENSPSMG00000019141) #35	CACTIN (ENSPSMG00000019114) #36	TBXA2R (ENSPSMG00000019078) #37
Bushbaby	MODERN SPECIES	144	ENSOGAG00000025449 #7	HDGFL2 (ENSOGAG00000007380) #8	ENSOGAG00000002199 #9	CHAF1A (ENSOGAG00000002196) #10	SH3GL1 (ENSOGAG00000002193) #11	MPND (ENSOGAG00000014780) #12	STAP2 (ENSOGAG00000001668) #13	FSD1 (ENSOGAG00000001666) #14	TMIGD2 (ENSOGAG00000001665) #15	SHD (ENSOGAG00000001664) #16	ENSOGAG00000001662 #17	EBI3 (ENSOGAG00000001661) #18	ANKRD24 (ENSOGAG00000024109) #19	SIRT6 (ENSOGAG00000001660) #20	CREB3L3 (ENSOGAG00000001659) #21	MAP2K2 (ENSOGAG00000001658) #22	ZBTB7A (ENSOGAG00000033963) #23	PIAS4 (ENSOGAG00000001656) #24	EEF2 (ENSOGAG00000010298) #25	DAPK3 (ENSOGAG00000010293) #26	NMRK2 (ENSOGAG00000017158) #27	ATCAY (ENSOGAG00000017156) #28	ZFR2 (ENSOGAG00000017150) #29	MATK (ENSOGAG00000004396) #30	RAX2 (ENSOGAG00000010138) #31	ENSOGAG00000033519 #32	APBA3 (ENSOGAG00000017147) #33	TJP3 (ENSOGAG00000017146) #34	PIP5K1C (ENSOGAG00000010393) #35	CACTIN (ENSOGAG00000010382) #36	TBXA2R (ENSOGAG00000026948) #37
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Tarsier	MODERN SPECIES	2381																MAP2K2 (ENSTSYG00000028430) #22
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.c #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Cebidae	ANCESTRAL SPECIES	20	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.c #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Marmoset	MODERN SPECIES	14	PLIN5 (ENSCJAG00000017538) ##7	PLIN4 (ENSCJAG00000086686) #7	HDGFL2 (ENSCJAG00000017556) #8	UBXN6 (ENSCJAG00000007418) #9	CHAF1A (ENSCJAG00000007402) #10	SH3GL1 (ENSCJAG00000007394) #11	MPND (ENSCJAG00000007387) #12	STAP2 (ENSCJAG00000003656) #13	FSD1 (ENSCJAG00000014650) #14	SHD (ENSCJAG00000008444) #16	YJU2 (ENSCJAG00000038170) #17	EBI3 (ENSCJAG00000013202) #18	ANKRD24 (ENSCJAG00000015134) #19	SIRT6 (ENSCJAG00000015120) #20	CREB3L3 (ENSCJAG00000015105) #21	MAP2K2 (ENSCJAG00000015084) #22	ZBTB7A (ENSCJAG00000036210) #23	PIAS4 (ENSCJAG00000015065) #24	EEF2 (ENSCJAG00000015045) #25	DAPK3 (ENSCJAG00000015041) #26	NMRK2 (ENSCJAG00000015033) #27	ATCAY (ENSCJAG00000015022) #28	ENSCJAG00000045089	MATK (ENSCJAG00000015004) #30	ENSCJAG00000079224	RAX2 (ENSCJAG00000015003) #31	MRPL54 (ENSCJAG00000014998) #32	APBA3 (ENSCJAG00000014981) #33	TJP3 (ENSCJAG00000014958) #34	PIP5K1C (ENSCJAG00000014951) #35	CACTIN (ENSCJAG00000014929) #36
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.c #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Capuchin	MODERN SPECIES	375											YJU2 (ENSCCAG00000015752) #17	EBI3 (ENSCCAG00000016244) #18	ANKRD24 (ENSCCAG00000019424) #19	SIRT6 (ENSCCAG00000021654) #20	CREB3L3 (ENSCCAG00000009229) #21	ENSCCAG00000020186 #22	ZBTB7A (ENSCCAG00000031015) #23	PIAS4 (ENSCCAG00000031276) #24	EEF2 (ENSCCAG00000034379) #25	DAPK3 (ENSCCAG00000036778) #26	NMRK2 (ENSCCAG00000027666) #27	ATCAY (ENSCCAG00000030577) #28	ZFR2 (ENSCCAG00000025541) #29	MATK (ENSCCAG00000027658) #30	RAX2 (ENSCCAG00000027035) #31	MRPL54 (ENSCCAG00000000138) #32	APBA3 (ENSCCAG00000033704) #33	TJP3 (ENSCCAG00000020120) #34	PIP5K1C (ENSCCAG00000019560) #35	CACTIN (ENSCCAG00000028723) #36	TBXA2R (ENSCCAG00000028722) #37
Bolivian squirrel monkey	MODERN SPECIES	150	PLIN4 (ENSSBOG00000020299) #7	HDGFL2 (ENSSBOG00000000080) #8	UBXN6 (ENSSBOG00000032557) #9	CHAF1A (ENSSBOG00000027727) #10	SH3GL1 (ENSSBOG00000019572) #11	MPND (ENSSBOG00000027720) #12	STAP2 (ENSSBOG00000025131) #13	FSD1 (ENSSBOG00000023601) #14	TMIGD2 (ENSSBOG00000035295) #15	SHD (ENSSBOG00000022737) #16	YJU2 (ENSSBOG00000023748) #17	EBI3 (ENSSBOG00000024178) #18	ANKRD24 (ENSSBOG00000029618) #19	SIRT6 (ENSSBOG00000029532) #20	CREB3L3 (ENSSBOG00000022378) #21	MAP2K2 (ENSSBOG00000033682) #22	ZBTB7A (ENSSBOG00000015331) #23	PIAS4 (ENSSBOG00000028685) #24	ENSSBOG00000006731 #25	DAPK3 (ENSSBOG00000032686) #26	NMRK2 (ENSSBOG00000016720) #27	ATCAY (ENSSBOG00000031021) #28	MATK (ENSSBOG00000030884) #30	MRPL54 (ENSSBOG00000028081) #32	APBA3 (ENSSBOG00000030975) #33	TJP3 (ENSSBOG00000035488) #34	PIP5K1C (ENSSBOG00000027787) #35	CACTIN (ENSSBOG00000034076) #36	GIPC3 (ENSSBOG00000021391)	HMG20B (ENSSBOG00000034086)	MFSD12 (ENSSBOG00000022502)
Mas night monkey	MODERN SPECIES	937	PLIN4 (ENSANAG00000034697) #7	HDGFL2 (ENSANAG00000032673) #8	UBXN6 (ENSANAG00000032835) #9	CHAF1A (ENSANAG00000025401) #10	SH3GL1 (ENSANAG00000035579) #11	MPND (ENSANAG00000020972) #12	STAP2 (ENSANAG00000036194) #13	FSD1 (ENSANAG00000027398) #14	ENSANAG00000022976	SHD (ENSANAG00000034629) #16	YJU2 (ENSANAG00000034742) #17	EBI3 (ENSANAG00000024033) #18	ANKRD24 (ENSANAG00000036761) #19	SIRT6 (ENSANAG00000037174) #20	CREB3L3 (ENSANAG00000029114) #21	MAP2K2 (ENSANAG00000036150) #22	ZBTB7A (ENSANAG00000022927) #23	PIAS4 (ENSANAG00000023065) #24	EEF2 (ENSANAG00000037323) #25	DAPK3 (ENSANAG00000029830) #26	ENSANAG00000037878 #27	ATCAY (ENSANAG00000029633) #28	ZFR2 (ENSANAG00000028699) #29	MATK (ENSANAG00000036207) #30	RAX2 (ENSANAG00000029699) #31	MRPL54 (ENSANAG00000028692) #32	APBA3 (ENSANAG00000034636) #33	TJP3 (ENSANAG00000028837) #34	PIP5K1C (ENSANAG00000036860) #35	CACTIN (ENSANAG00000034680) #36	TBXA2R (ENSANAG00000009361) #37
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.d #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.d #22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.d #22
Capuchin	MODERN SPECIES	30	TM4SF1 (ENSCCAG00000033032)	TM4SF4 (ENSCCAG00000028225)	WWTR1 (ENSCCAG00000033257)	COMMD2 (ENSCCAG00000030153)	ENSCCAG00000024462	ANKUB1 (ENSCCAG00000032570)	ENSCCAG00000020698	SLC38A5 (ENSCCAG00000032976)	FTSJ1 (ENSCCAG00000027731)	PORCN (ENSCCAG00000035069)	EBP (ENSCCAG00000027079)	TBC1D25 (ENSCCAG00000033507)	RBM3 (ENSCCAG00000038019)	WDR13 (ENSCCAG00000038091)	WAS (ENSCCAG00000036792)	ENSCCAG00000001345 #22	SUV39H1 (ENSCCAG00000004739)	GLOD5 (ENSCCAG00000033598)	GATA1 (ENSCCAG00000032671)	ENSCCAG00000037521	PCSK1N (ENSCCAG00000032016)	TIMM17B (ENSCCAG00000030275)	PQBP1 (ENSCCAG00000034951) ##36	SLC35A2 (ENSCCAG00000025257)	PIM2 (ENSCCAG00000024329)	OTUD5 (ENSCCAG00000033387)	KCND1 (ENSCCAG00000037150)	GRIPAP1 (ENSCCAG00000003776)
Catarrhini	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33
Vervet Monkey	MODERN SPECIES	25	PLIN4 (ENSCSAG00000010532) #7	HDGFL2 (ENSCSAG00000010539) #8	UBXN6 (ENSCSAG00000010549) #9	CHAF1A (ENSCSAG00000010557) #10	SH3GL1 (ENSCSAG00000010564) #11	MPND (ENSCSAG00000010574) #12	STAP2 (ENSCSAG00000010602) #13	FSD1 (ENSCSAG00000010620) #14	TMIGD2 (ENSCSAG00000010627) #15	SHD (ENSCSAG00000010649) #16	YJU2 (ENSCSAG00000010670) #17	EBI3 (ENSCSAG00000010684) #18	ANKRD24 (ENSCSAG00000010711) #19	SIRT6 (ENSCSAG00000010757) #20	CREB3L3 (ENSCSAG00000010762) #21	MAP2K2 (ENSCSAG00000010771) #22	ZBTB7A (ENSCSAG00000010775) #23	ENSCSAG00000018816	PIAS4 (ENSCSAG00000010838) #24	EEF2 (ENSCSAG00000010865) #25	DAPK3 (ENSCSAG00000010873) #26	NMRK2 (ENSCSAG00000010882) #27	ATCAY (ENSCSAG00000010889) #28	ZFR2 (ENSCSAG00000010914) #29	MATK (ENSCSAG00000010938) #30	RAX2 (ENSCSAG00000010944) #31	MRPL54 (ENSCSAG00000010950) #32	APBA3 (ENSCSAG00000010973) #33	TJP3 (ENSCSAG00000011066) #34	PIP5K1C (ENSCSAG00000011108) #35	CACTIN (ENSCSAG00000011116) #36
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33
Macaca	ANCESTRAL SPECIES	24	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36
Pig-tailed macaque	MODERN SPECIES	76	PLIN5 (ENSMNEG00000033253) ##7	HDGFL2 (ENSMNEG00000034980) #8	UBXN6 (ENSMNEG00000030532) #9	CHAF1A (ENSMNEG00000039177) #10	SH3GL1 (ENSMNEG00000003775) #11	MPND (ENSMNEG00000014406) #12	STAP2 (ENSMNEG00000033310) #13	FSD1 (ENSMNEG00000026815) #14	TMIGD2 (ENSMNEG00000041785) #15	SHD (ENSMNEG00000032816) #16	YJU2 (ENSMNEG00000036028) #17	EBI3 (ENSMNEG00000044798) #18	ANKRD24 (ENSMNEG00000044905) #19	SIRT6 (ENSMNEG00000029466) #20	CREB3L3 (ENSMNEG00000039631) #21	MAP2K2 (ENSMNEG00000044105) #22	ZBTB7A (ENSMNEG00000033804) #23	PIAS4 (ENSMNEG00000030027) #24	EEF2 (ENSMNEG00000021403) #25	DAPK3 (ENSMNEG00000034480) #26	NMRK2 (ENSMNEG00000033367) #27	ENSMNEG00000018044	ENSMNEG00000016763	ATCAY (ENSMNEG00000027990) #28	ZFR2 (ENSMNEG00000043770) #29	MATK (ENSMNEG00000042873) #30	RAX2 (ENSMNEG00000034075) #31	MRPL54 (ENSMNEG00000039499) #32	APBA3 (ENSMNEG00000028714) #33	TJP3 (ENSMNEG00000029063) #34	PIP5K1C (ENSMNEG00000023721) #35
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.a.d.a.a.a.a	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Rhesus	MODERN SPECIES	10	HDGFL2 (ENSMMUG00000028925) #8	UBXN6 (ENSMMUG00000016709) #9	CHAF1A (ENSMMUG00000016706) #10	SH3GL1 (ENSMMUG00000000273) #11	MPND (ENSMMUG00000028926) #12	ENSMMUG00000059812	STAP2 (ENSMMUG00000000271) #13	FSD1 (ENSMMUG00000000268) #14	TMIGD2 (ENSMMUG00000045860) #15	SHD (ENSMMUG00000028927) #16	YJU2 (ENSMMUG00000010100) #17	ANKRD24 (ENSMMUG00000028928) #19	SIRT6 (ENSMMUG00000019955) #20	CREB3L3 (ENSMMUG00000019954) #21	ENSMMUG00000063002	MAP2K2 (ENSMMUG00000019564) #22	ZBTB7A (ENSMMUG00000063320) #23	PIAS4 (ENSMMUG00000011018) #24	EEF2 (ENSMMUG00000022767) #25	ENSMMUG00000065079	DAPK3 (ENSMMUG00000022765)	NMRK2 (ENSMMUG00000015273) #27	ENSMMUG00000056147	ENSMMUG00000064233	ATCAY (ENSMMUG00000039195) #28	ZFR2 (ENSMMUG00000054579) #29	MATK (ENSMMUG00000001917) #30	RAX2 (ENSMMUG00000056802) #31	MRPL54 (ENSMMUG00000044080) #32	APBA3 (ENSMMUG00000009672) #33	TJP3 (ENSMMUG00000028930) #34
Crab-eating macaque	MODERN SPECIES	10	PLIN5 (ENSMFAG00000000248) ##7	PLIN4 (ENSMFAG00000000239) #7	HDGFL2 (ENSMFAG00000000309) #8	SH3GL1 (ENSMFAG00000044037) #11	MPND (ENSMFAG00000033303) #12	STAP2 (ENSMFAG00000030521) #13	FSD1 (ENSMFAG00000041951) #14	SHD (ENSMFAG00000033388) #16	YJU2 (ENSMFAG00000059349) #17	TMIGD2 (ENSMFAG00000031969) #15	EBI3 (ENSMFAG00000038770) #18	ANKRD24 (ENSMFAG00000038641) #19	SIRT6 (ENSMFAG00000001546) #20	CREB3L3 (ENSMFAG00000040065) #21	ENSMFAG00000053986	MAP2K2 (ENSMFAG00000039192) #22	PIAS4 (ENSMFAG00000046119) #24	NMRK2 (ENSMFAG00000033332) #27	ENSMFAG00000028991	ENSMFAG00000052942	ENSMFAG00000040276 #25	ATCAY (ENSMFAG00000002982) #28	ZFR2 (ENSMFAG00000031215) #29	RAX2 (ENSMFAG00000065615) #31	MATK (ENSMFAG00000030470) #30	MRPL54 (ENSMFAG00000003311) #32	APBA3 (ENSMFAG00000044015) #33	MFSD12 (ENSMFAG00000039649)	TEKTIP1 (ENSMFAG00000036699)	FZR1 (ENSMFAG00000003458)	SMIM24 (ENSMFAG00000037612)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33
Olive baboon	MODERN SPECIES	12	SEMA6B (ENSPANG00000014342)	LRG1 (ENSPANG00000038034)	PLIN5 (ENSPANG00000019798) ##7	PLIN4 (ENSPANG00000018994) #7	ENSPANG00000041390 #8	UBXN6 (ENSPANG00000014343) #9	SH3GL1 (ENSPANG00000030582) #11	MPND (ENSPANG00000008881) #12	FSD1 (ENSPANG00000019255) #14	TMIGD2 (ENSPANG00000019801) #15	YJU2 (ENSPANG00000009046) #17	EBI3 (ENSPANG00000011050) #18	ANKRD24 (ENSPANG00000007947) #19	SIRT6 (ENSPANG00000004922) #20	CREB3L3 (ENSPANG00000003567) #21	MAP2K2 (ENSPANG00000008882) #22	ZBTB7A (ENSPANG00000010574) #23	PIAS4 (ENSPANG00000003087) #24	EEF2 (ENSPANG00000007589) #25	NMRK2 (ENSPANG00000013229) #27	ATCAY (ENSPANG00000000280) #28	ZFR2 (ENSPANG00000003088) #29	MATK (ENSPANG00000017163) #30	RAX2 (ENSPANG00000013783) #31	MRPL54 (ENSPANG00000033944) #32	APBA3 (ENSPANG00000003568) #33	TJP3 (ENSPANG00000013784) #34	NFIC (ENSPANG00000004923)	SMIM44 (ENSPANG00000029842)	DOHH (ENSPANG00000032446)	FZR1 (ENSPANG00000004724)
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.gb.a #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33
Sooty mangabey	MODERN SPECIES	177	PLIN4 (ENSCATG00000032467) #7	HDGFL2 (ENSCATG00000040769) #8	UBXN6 (ENSCATG00000039313) #9	CHAF1A (ENSCATG00000037940) #10	SH3GL1 (ENSCATG00000038128) #11	MPND (ENSCATG00000004001) #12	STAP2 (ENSCATG00000036308) #13	FSD1 (ENSCATG00000016062) #14	TMIGD2 (ENSCATG00000031952) #15	SHD (ENSCATG00000036509) #16	YJU2 (ENSCATG00000041597) #17	EBI3 (ENSCATG00000037867) #18	ANKRD24 (ENSCATG00000044887) #19	SIRT6 (ENSCATG00000039436) #20	CREB3L3 (ENSCATG00000040399) #21	MAP2K2 (ENSCATG00000030991) #22	ZBTB7A (ENSCATG00000042184) #23	ENSCATG00000041220	PIAS4 (ENSCATG00000038579) #24	ENSCATG00000039972 #25	DAPK3 (ENSCATG00000041841) #26	NMRK2 (ENSCATG00000039387) #27	ENSCATG00000034164	ATCAY (ENSCATG00000038400) #28	ENSCATG00000024725	ZFR2 (ENSCATG00000028559) #29	MATK (ENSCATG00000037452) #30	RAX2 (ENSCATG00000038515) #31	MRPL54 (ENSCATG00000014066) #32	APBA3 (ENSCATG00000040664) #33	TJP3 (ENSCATG00000038428) #34
Drill	MODERN SPECIES	1534	PLIN5 (ENSMLEG00000033803) ##7	PLIN4 (ENSMLEG00000037632) #7	HDGFL2 (ENSMLEG00000040813) #8	UBXN6 (ENSMLEG00000038954) #9	CHAF1A (ENSMLEG00000037211) #10	SH3GL1 (ENSMLEG00000024076) #11	MPND (ENSMLEG00000035802) #12	STAP2 (ENSMLEG00000028740) #13	FSD1 (ENSMLEG00000039314) #14	ENSMLEG00000013785	YJU2 (ENSMLEG00000017413) #17	EBI3 (ENSMLEG00000032602) #18	ANKRD24 (ENSMLEG00000022250) #19	SIRT6 (ENSMLEG00000031246) #20	CREB3L3 (ENSMLEG00000026233) #21	MAP2K2 (ENSMLEG00000031781) #22	ZBTB7A (ENSMLEG00000044096) #23	ENSMLEG00000027287	ENSMLEG00000035883	PIAS4 (ENSMLEG00000036604) #24	EEF2 (ENSMLEG00000031184) #25	DAPK3 (ENSMLEG00000028735) #26	NMRK2 (ENSMLEG00000040462) #27	ENSMLEG00000015044	ATCAY (ENSMLEG00000036887) #28	ENSMLEG00000044258	ZFR2 (ENSMLEG00000004713) #29	MATK (ENSMLEG00000030543) #30	RAX2 (ENSMLEG00000032619) #31	ENSMLEG00000039241 #32	APBA3 (ENSMLEG00000038059) #33
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00910000147666	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35
Golden snub-nosed monkey	MODERN SPECIES	1318	PLIN4 (ENSRROG00000041408) #7	HDGFL2 (ENSRROG00000037992) #8	UBXN6 (ENSRROG00000030534) #9	CHAF1A (ENSRROG00000029710) #10	SH3GL1 (ENSRROG00000040183) #11	MPND (ENSRROG00000029655) #12	STAP2 (ENSRROG00000031412) #13	FSD1 (ENSRROG00000042651) #14	TMIGD2 (ENSRROG00000039740) #15	SHD (ENSRROG00000016590) #16	YJU2 (ENSRROG00000020167) #17	EBI3 (ENSRROG00000032150) #18	ANKRD24 (ENSRROG00000024500) #19	SIRT6 (ENSRROG00000000693) #20	CREB3L3 (ENSRROG00000044737) #21	MAP2K2 (ENSRROG00000031471) #22	ZBTB7A (ENSRROG00000026824) #23	ENSRROG00000031290	PIAS4 (ENSRROG00000032682) #24	EEF2 (ENSRROG00000019319) #25	DAPK3 (ENSRROG00000045681) #26	NMRK2 (ENSRROG00000044574) #27	ATCAY (ENSRROG00000042086) #28	ZFR2 (ENSRROG00000039340) #29	ENSRROG00000031786	MATK (ENSRROG00000038991) #30	RAX2 (ENSRROG00000029798) #31	MRPL54 (ENSRROG00000018776) #32	APBA3 (ENSRROG00000033516) #33	TJP3 (ENSRROG00000024434) #34	PIP5K1C (ENSRROG00000032134) #35
Black snub-nosed monkey	MODERN SPECIES	1317	PLIN4 (ENSRBIG00000040411) #7	HDGFL2 (ENSRBIG00000028930) #8	UBXN6 (ENSRBIG00000029192) #9	CHAF1A (ENSRBIG00000016297) #10	SH3GL1 (ENSRBIG00000034946) #11	MPND (ENSRBIG00000038275) #12	STAP2 (ENSRBIG00000043595) #13	FSD1 (ENSRBIG00000037917) #14	TMIGD2 (ENSRBIG00000042843) #15	SHD (ENSRBIG00000041984) #16	YJU2 (ENSRBIG00000038718) #17	EBI3 (ENSRBIG00000036125) #18	ENSRBIG00000029412	SIRT6 (ENSRBIG00000029575) #20	CREB3L3 (ENSRBIG00000043806) #21	MAP2K2 (ENSRBIG00000029645) #22	ZBTB7A (ENSRBIG00000032186) #23	ENSRBIG00000034476	PIAS4 (ENSRBIG00000042254) #24	EEF2 (ENSRBIG00000044754) #25	DAPK3 (ENSRBIG00000042224) #26	NMRK2 (ENSRBIG00000042328) #27	ATCAY (ENSRBIG00000039841) #28	ENSRBIG00000044760	ZFR2 (ENSRBIG00000038095) #29	MATK (ENSRBIG00000002775) #30	RAX2 (ENSRBIG00000038716) #31	MRPL54 (ENSRBIG00000027038) #32	APBA3 (ENSRBIG00000033828) #33	TJP3 (ENSRBIG00000031586) #34	PIP5K1C (ENSRBIG00000044337) #35
Hominoidea	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34
Hominidae	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34
Homo/Pan/Gorilla group	DUPLICATION
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.e #22	ENSGT00940000162053 #23	ENSGT00910000147341	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34
Gorilla	MODERN SPECIES	10	PLIN4 (ENSGGOG00000016988) #7	HDGFL2 (ENSGGOG00000022122) #8	UBXN6 (ENSGGOG00000009243) #9	ENSGGOG00000040557 #10	SH3GL1 (ENSGGOG00000008198) #11	MPND (ENSGGOG00000008189) #12	STAP2 (ENSGGOG00000012964) #13	FSD1 (ENSGGOG00000012955) #14	TMIGD2 (ENSGGOG00000040045) #15	SHD (ENSGGOG00000010231) #16	YJU2 (ENSGGOG00000000335) #17	EBI3 (ENSGGOG00000011932) #18	ANKRD24 (ENSGGOG00000013418) #19	SIRT6 (ENSGGOG00000008838) #20	CREB3L3 (ENSGGOG00000008831) #21	MAP2K2 (ENSGGOG00000008832) #22	ENSGGOG00000009097 #23	ENSGGOG00000043433	ENSGGOG00000005124	PIAS4 (ENSGGOG00000007895) #24	EEF2 (ENSGGOG00000012869) #25	DAPK3 (ENSGGOG00000002018) #26	NMRK2 (ENSGGOG00000004857) #27	ENSGGOG00000038336	ATCAY (ENSGGOG00000006826) #28	ZFR2 (ENSGGOG00000002866) #29	MATK (ENSGGOG00000014700) #30	RAX2 (ENSGGOG00000014727) #31	MRPL54 (ENSGGOG00000014722) #32	APBA3 (ENSGGOG00000004637) #33	TJP3 (ENSGGOG00000004626) #34
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.e #22	ENSGT00940000162053 #23	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35
Pan	ANCESTRAL SPECIES	14	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c.a #11	ENSGT00940000160191 #12	ENSGT00530000063841.b.d #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.e #22	ENSGT00940000162053 #23	ENSGT00390000017269	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00910000147218	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35
Chimpanzee	MODERN SPECIES	10	PLIN4 (ENSPTRG00000010313) #7	HDGFL2 (ENSPTRG00000010311) #8	UBXN6 (ENSPTRG00000010310) #9	CHAF1A (ENSPTRG00000010309) #10	SH3GL1 (ENSPTRG00000010308) #11	MPND (ENSPTRG00000010307) #12	STAP2 (ENSPTRG00000051487) #13	FSD1 (ENSPTRG00000010302) #14	TMIGD2 (ENSPTRG00000010301) #15	SHD (ENSPTRG00000010300) #16	YJU2 (ENSPTRG00000010299) #17	EBI3 (ENSPTRG00000010298) #18	ANKRD24 (ENSPTRG00000010297) #19	SIRT6 (ENSPTRG00000010296) #20	CREB3L3 (ENSPTRG00000010295) #21	MAP2K2 (ENSPTRG00000010294) #22	ZBTB7A (ENSPTRG00000010292) #23	ENSPTRG00000010291	PIAS4 (ENSPTRG00000010290) #24	EEF2 (ENSPTRG00000010288) #25	DAPK3 (ENSPTRG00000010286) #26	ENSPTRG00000045925	ATCAY (ENSPTRG00000023462) #28	ZFR2 (ENSPTRG00000010279) #29	MATK (ENSPTRG00000010278) #30	RAX2 (ENSPTRG00000010277) #31	MRPL54 (ENSPTRG00000010276) #32	APBA3 (ENSPTRG00000010275) #33	TJP3 (ENSPTRG00000010274) #34	PIP5K1C (ENSPTRG00000010273) #35	CACTIN (ENSPTRG00000010272) #36
Bonobo	MODERN SPECIES	10	ENSPPAG00000031326 #7	HDGFL2 (ENSPPAG00000043341) #8	UBXN6 (ENSPPAG00000034216) #9	CHAF1A (ENSPPAG00000033194) #10	SH3GL1 (ENSPPAG00000028433) #11	MPND (ENSPPAG00000032201) #12	STAP2 (ENSPPAG00000013672) #13	FSD1 (ENSPPAG00000039445) #14	TMIGD2 (ENSPPAG00000033327) #15	SHD (ENSPPAG00000027454) #16	YJU2 (ENSPPAG00000003797) #17	EBI3 (ENSPPAG00000041603) #18	ENSPPAG00000043742 #19	SIRT6 (ENSPPAG00000034387) #20	CREB3L3 (ENSPPAG00000034576) #21	MAP2K2 (ENSPPAG00000029228) #22	ENSPPAG00000041020 #23	PIAS4 (ENSPPAG00000032474) #24	EEF2 (ENSPPAG00000042319) #25	DAPK3 (ENSPPAG00000029008) #26	ENSPPAG00000043330 #27	ENSPPAG00000043971	ATCAY (ENSPPAG00000041506) #28	ZFR2 (ENSPPAG00000031541) #29	MATK (ENSPPAG00000008704) #30	RAX2 (ENSPPAG00000039142) #31	MRPL54 (ENSPPAG00000042418) #32	APBA3 (ENSPPAG00000026188) #33	TJP3 (ENSPPAG00000040704) #34	PIP5K1C (ENSPPAG00000029984) #35	CACTIN (ENSPPAG00000028205) #36
Human	MODERN SPECIES	10	PLIN4 (ENSG00000167676) #7	HDGFL2 (ENSG00000167674) #8	UBXN6 (ENSG00000167671) #9	CHAF1A (ENSG00000167670) #10	SH3GL1 (ENSG00000141985) #11	MPND (ENSG00000008382) #12	STAP2 (ENSG00000178078) #13	FSD1 (ENSG00000105255) #14	TMIGD2 (ENSG00000167664) #15	SHD (ENSG00000105251) #16	YJU2 (ENSG00000105248) #17	EBI3 (ENSG00000105246) #18	ANKRD24 (ENSG00000089847) #19	SIRT6 (ENSG00000077463) #20	CREB3L3 (ENSG00000060566) #21	MAP2K2 (ENSG00000126934) #22	ZBTB7A (ENSG00000178951) #23	PIAS4 (ENSG00000105229) #24	EEF2 (ENSG00000167658) #25	DAPK3 (ENSG00000167657) #26	NMRK2 (ENSG00000077009) #27	ATCAY (ENSG00000167654) #28	ZFR2 (ENSG00000105278) #29	MATK (ENSG00000007264) #30	RAX2 (ENSG00000173976) #31	MRPL54 (ENSG00000183617) #32	APBA3 (ENSG00000011132) #33	TJP3 (ENSG00000105289) #34	PIP5K1C (ENSG00000186111) #35	CACTIN (ENSG00000105298) #36	TBXA2R (ENSG00000006638) #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	15	ENSGT00940000156059.k	ENSGT00910000147243	ENSGT00940000162027	ENSGT00940000161477	ENSGT01010000222360.E.c	ENSGT01030000234549.a.a.a.a.b	ENSGT00940000159122	ENSGT00940000153588.a.b	ENSGT00390000013208.y.a	ENSGT00390000003224.B	ENSGT00940000160243	ENSGT00940000159926	ENSGT00530000063347.B	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f #22	ENSGT00940000159484	ENSGT00940000157206	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f	ENSGT00400000022095.a	ENSGT00510000046985.h.b.a.a.a	ENSGT00640000091917	ENSGT00390000006835	ENSGT00390000004852.a.b	ENSGT00910000147710	ENSGT00390000006086	ENSGT00940000155977	ENSGT00390000013963	ENSGT00390000015907	ENSGT00940000160121
Homo/Pan group	ANCESTRAL SPECIES	15	ENSGT00940000161358.c.a	ENSGT00940000156059.l.b	ENSGT00940000162027	ENSGT00940000161477	ENSGT01010000222360.E.c	ENSGT01030000234549.a.a.a.a.b	ENSGT00940000159122	ENSGT00940000153588.a.b	ENSGT00390000013208.y.a.a	ENSGT00390000003224.B	ENSGT00940000160243	ENSGT00940000159926	ENSGT00530000063347.B	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f #22	ENSGT00940000159484	ENSGT00940000157206	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f	ENSGT00400000022095.a	ENSGT00640000091917	ENSGT00390000006835	ENSGT00390000004852.a.b	ENSGT00910000147710	ENSGT00390000006086	ENSGT00940000155977	ENSGT00390000013963	ENSGT00390000015907	ENSGT00940000160121	ENSGT00940000161774
Pan	ANCESTRAL SPECIES	13	ENSGT00940000161358.c.a	ENSGT00940000156059.l.b	ENSGT00940000162027	ENSGT00940000161477	ENSGT01010000222360.E.c	ENSGT01030000234549.a.a.a.a.b	ENSGT00940000159122	ENSGT00940000153588.a.b	ENSGT00390000013208.y.a.a	ENSGT00390000003224.B	ENSGT00940000160243	ENSGT00940000159926	ENSGT00530000063347.B	ENSGT00390000013354.d.a.a.a.a	ENSGT00390000003721.d.a.d	ENSGT00940000153487.b.a.f #22	ENSGT00940000159484	ENSGT00940000157206	ENSGT01030000235325	ENSGT00950000182981.b.f.a.f	ENSGT00400000022095.a	ENSGT00640000091917	ENSGT00390000006835	ENSGT00390000004852.a.b	ENSGT00910000147710	ENSGT00390000006086	ENSGT00940000155977	ENSGT00390000013963	ENSGT00390000015907	ENSGT00940000160121	ENSGT00940000161774
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	ENSPTRG00000049622	ENSPTRG00000019664	GARIN1A (ENSPTRG00000028396)	GARIN1B (ENSPTRG00000019667)	CALU (ENSPTRG00000050961)	OPN1SW (ENSPTRG00000019669)	CCDC136 (ENSPTRG00000019670)	FLNC (ENSPTRG00000019671)	ATP6V1F (ENSPTRG00000019672)	ATP6V1FNB (ENSPTRG00000050196)	KCP (ENSPTRG00000045199)	IRF5 (ENSPTRG00000019675)	TNPO3 (ENSPTRG00000019676)	ENSPTRG00000050813	ENSPTRG00000043840	ENSPTRG00000042432 #22	TSPAN33 (ENSPTRG00000019678)	SMO (ENSPTRG00000019680)	AHCYL2 (ENSPTRG00000019681)	STRIP2 (ENSPTRG00000019682)	ENSPTRG00000048623	NRF1 (ENSPTRG00000019683)	UBE2H (ENSPTRG00000041671)	ENSPTRG00000050994	ZC3HC1 (ENSPTRG00000019685)	KLHDC10 (ENSPTRG00000019687)	TMEM209 (ENSPTRG00000019691)	SSMEM1 (ENSPTRG00000019692)	CPA2 (ENSPTRG00000019693)	CPA4 (ENSPTRG00000019694)	CPA5 (ENSPTRG00000019695)
Chimpanzee	MODERN SPECIES	571															ENSPTRG00000048391	ENSPTRG00000050269 #22	ENSPTRG00000047489	ENSPTRG00000047167	ENSPTRG00000052110	ENSPTRG00000051713	ENSPTRG00000046573	ENSPTRG00000052315
Bonobo	MODERN SPECIES	20	IMPDH1 (ENSPPAG00000037421)	HILPDA (ENSPPAG00000022117)	ENSPPAG00000041977	GARIN1A (ENSPPAG00000036357)	ENSPPAG00000041706	CALU (ENSPPAG00000028481)	OPN1SW (ENSPPAG00000040601)	CCDC136 (ENSPPAG00000038709)	FLNC (ENSPPAG00000035541)	ENSPPAG00000027671	ATP6V1FNB (ENSPPAG00000034113)	KCP (ENSPPAG00000001412)	IRF5 (ENSPPAG00000031382)	TNPO3 (ENSPPAG00000034975)	ENSPPAG00000010380	ENSPPAG00000026536 #22	TSPAN33 (ENSPPAG00000029860)	SMO (ENSPPAG00000032237)	AHCYL2 (ENSPPAG00000039508)	STRIP2 (ENSPPAG00000036173)	NRF1 (ENSPPAG00000040353)	UBE2H (ENSPPAG00000040966)	ENSPPAG00000043329	ZC3HC1 (ENSPPAG00000043172)	KLHDC10 (ENSPPAG00000035194)	TMEM209 (ENSPPAG00000029839)	SSMEM1 (ENSPPAG00000029778)	CPA2 (ENSPPAG00000042610)	CPA4 (ENSPPAG00000024844)	CPA5 (ENSPPAG00000028093)	CPA1 (ENSPPAG00000038156)
Gorilla	MODERN SPECIES	20	ENSGGOG00000040589	ENSGGOG00000039433	GARIN1A (ENSGGOG00000026799)	ENSGGOG00000004895	CALU (ENSGGOG00000005817)	OPN1SW (ENSGGOG00000005822)	CCDC136 (ENSGGOG00000005828)	FLNC (ENSGGOG00000002420)	ATP6V1F (ENSGGOG00000023527)	ATP6V1FNB (ENSGGOG00000038602)	KCP (ENSGGOG00000015103)	IRF5 (ENSGGOG00000012013)	TNPO3 (ENSGGOG00000008339)	ENSGGOG00000023221	ENSGGOG00000036972	ENSGGOG00000027737 #22	TSPAN33 (ENSGGOG00000007835)	SMO (ENSGGOG00000003227)	AHCYL2 (ENSGGOG00000025074)	STRIP2 (ENSGGOG00000016807)	ENSGGOG00000022169	SMKR1 (ENSGGOG00000038256)	NRF1 (ENSGGOG00000010726)	UBE2H (ENSGGOG00000042613)	ENSGGOG00000039406	ZC3HC1 (ENSGGOG00000015504)	KLHDC10 (ENSGGOG00000000677)	TMEM209 (ENSGGOG00000034882)	SSMEM1 (ENSGGOG00000038460)	CPA2 (ENSGGOG00000002408)	CPA4 (ENSGGOG00000040989)
Orangutan	MODERN SPECIES	10	HDGFL2 (ENSPPYG00000009408) #8	UBXN6 (ENSPPYG00000009407) #9	CHAF1A (ENSPPYG00000009406) #10	SH3GL1 (ENSPPYG00000009405) #11	MPND (ENSPPYG00000009404) #12	STAP2 (ENSPPYG00000009403) #13	FSD1 (ENSPPYG00000009402) #14	TMIGD2 (ENSPPYG00000009401) #15	SHD (ENSPPYG00000009400) #16	YJU2 (ENSPPYG00000009399) #17	EBI3 (ENSPPYG00000009398) #18	ANKRD24 (ENSPPYG00000009397) #19	SIRT6 (ENSPPYG00000009396) #20	CREB3L3 (ENSPPYG00000009395) #21	ENSPPYG00000041684	ENSPPYG00000033737 #22	ZBTB7A (ENSPPYG00000010584) #23	PIAS4 (ENSPPYG00000009394) #24	EEF2 (ENSPPYG00000009393) #25	DAPK3 (ENSPPYG00000009392) #26	NMRK2 (ENSPPYG00000009391) #27	ATCAY (ENSPPYG00000009390) #28	ZFR2 (ENSPPYG00000009389) #29	MATK (ENSPPYG00000009388) #30	RAX2 (ENSPPYG00000009387) #31	MRPL54 (ENSPPYG00000040130) #32	APBA3 (ENSPPYG00000009385) #33	TJP3 (ENSPPYG00000009384) #34	PIP5K1C (ENSPPYG00000009383) #35	CACTIN (ENSPPYG00000009382) #36	TBXA2R (ENSPPYG00000009381) #37
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	7	PLIN5 (ENSNLEG00000013304) ##7	ENSNLEG00000029998 #7	ENSNLEG00000013287 #8	UBXN6 (ENSNLEG00000003179) #9	CHAF1A (ENSNLEG00000003132) #10	SH3GL1 (ENSNLEG00000003122) #11	ENSNLEG00000003118 #14	TMIGD2 (ENSNLEG00000003114) #15	SHD (ENSNLEG00000003109) #16	ENSNLEG00000003106 #17	ENSNLEG00000031416	EBI3 (ENSNLEG00000003102) #18	ANKRD24 (ENSNLEG00000002891) #19	ENSNLEG00000003083 #20	ENSNLEG00000002909 #21	MAP2K2 (ENSNLEG00000003013) #22	ENSNLEG00000029515	ENSNLEG00000019024	ENSNLEG00000002981 #25	DAPK3 (ENSNLEG00000002973) #26	NMRK2 (ENSNLEG00000002935) #27	ENSNLEG00000027774	ATCAY (ENSNLEG00000002928) #28	ZFR2 (ENSNLEG00000002912) #29	MATK (ENSNLEG00000002816) #30	RAX2 (ENSNLEG00000002811) #31	ENSNLEG00000002809 #32	APBA3 (ENSNLEG00000002776) #33	TJP3 (ENSNLEG00000002720) #34	ENSNLEG00000031233 #35	ENSNLEG00000002565 #36
Gibbon	MODERN SPECIES	3	HILPDA (ENSNLEG00000028127)	ENSNLEG00000012368	ENSNLEG00000012374	CALU (ENSNLEG00000012380)	OPN1SW (ENSNLEG00000012417)	CCDC136 (ENSNLEG00000012424)	FLNC (ENSNLEG00000012428)	ATP6V1F (ENSNLEG00000012442)	ATP6V1FNB (ENSNLEG00000012447)	KCP (ENSNLEG00000012449)	IRF5 (ENSNLEG00000012454)	TNPO3 (ENSNLEG00000012491)	ENSNLEG00000027686	ENSNLEG00000031882	ENSNLEG00000028436	ENSNLEG00000012555 #22	TSPAN33 (ENSNLEG00000012558)	SMO (ENSNLEG00000012575)	AHCYL2 (ENSNLEG00000012581)	STRIP2 (ENSNLEG00000012629)	ENSNLEG00000031314	SMKR1 (ENSNLEG00000018605)	NRF1 (ENSNLEG00000012659)	UBE2H (ENSNLEG00000012685)	ZC3HC1 (ENSNLEG00000012698)	KLHDC10 (ENSNLEG00000012718)	ENSNLEG00000029386	TMEM209 (ENSNLEG00000012732)	SSMEM1 (ENSNLEG00000012746)	CPA2 (ENSNLEG00000012753)	CPA4 (ENSNLEG00000012761)
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Glires	ANCESTRAL SPECIES	25	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a #22
Pika	DUPLICATION
Pika	MODERN SPECIES	1679																ENSOPRG00000011096 #22
Pika	MODERN SPECIES	8706																ENSOPRG00000019099 #22
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957	ENSGT00390000003403	ENSGT00940000154660.a	ENSGT00950000182916.a.a
Naked mole-rat female	MODERN SPECIES	21	HDGFL2 (ENSHGLG00000010821) #8	UBXN6 (ENSHGLG00000011971) #9	ENSHGLG00000035324	CHAF1A (ENSHGLG00000005439) #10	SH3GL1 (ENSHGLG00000005623) #11	MPND (ENSHGLG00000006669) #12	STAP2 (ENSHGLG00000008727) #13	FSD1 (ENSHGLG00000006238) #14	TMIGD2 (ENSHGLG00000036449) #15	SHD (ENSHGLG00000007108) #16	YJU2 (ENSHGLG00000008096) #17	ENSHGLG00000005526	ANKRD24 (ENSHGLG00000010865) #19	SIRT6 (ENSHGLG00000006696) #20	CREB3L3 (ENSHGLG00000050546) #21	MAP2K2 (ENSHGLG00000009089) #22	ZBTB7A (ENSHGLG00000011811) #23	PIAS4 (ENSHGLG00000006172) #24	ENSHGLG00000007881 #25	DAPK3 (ENSHGLG00000009769) #26	ENSHGLG00000015025	GADD45B (ENSHGLG00000044805)	GNG7 (ENSHGLG00000017287)	DIRAS1 (ENSHGLG00000013381)	SLC39A3 (ENSHGLG00000033652)	SGTA (ENSHGLG00000018547)	ENSHGLG00000040783	ENSHGLG00000019144	DOHH (ENSHGLG00000039512)	SMIM44 (ENSHGLG00000040448)	ENSHGLG00000036870
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957	ENSGT00940000154660.a	ENSGT00950000182916.a.a	ENSGT00940000154201.a.a.b.d
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957	ENSGT00940000154660.a	ENSGT00950000182916.a.a	ENSGT00940000154201.a.a.b.d
Long-tailed chinchilla	MODERN SPECIES	202	PLIN5 (ENSCLAG00000015835) ##7	HDGFL2 (ENSCLAG00000008598) #8	UBXN6 (ENSCLAG00000010885) #9	CHAF1A (ENSCLAG00000008702) #10	SH3GL1 (ENSCLAG00000006871) #11	MPND (ENSCLAG00000007417) #12	STAP2 (ENSCLAG00000008850) #13	FSD1 (ENSCLAG00000013151) #14	TMIGD2 (ENSCLAG00000016455) #15	SHD (ENSCLAG00000009664) #16	YJU2 (ENSCLAG00000010329) #17	EBI3 (ENSCLAG00000013574) #18	ENSCLAG00000011806 #19	SIRT6 (ENSCLAG00000008888) #20	CREB3L3 (ENSCLAG00000011297) #21	MAP2K2 (ENSCLAG00000011717) #22	ZBTB7A (ENSCLAG00000012947) #23	PIAS4 (ENSCLAG00000014404) #24	EEF2 (ENSCLAG00000014112) #25	DAPK3 (ENSCLAG00000009010) #26	LMNB2 (ENSCLAG00000007920)	GADD45B (ENSCLAG00000008923)	GNG7 (ENSCLAG00000009115)	DIRAS1 (ENSCLAG00000017925)	SGTA (ENSCLAG00000010647)	THOP1 (ENSCLAG00000015063)	DOHH (ENSCLAG00000007817)	SMIM24 (ENSCLAG00000007177)	NFIC (ENSCLAG00000007526)	CELF5 (ENSCLAG00000009940)	NCLN (ENSCLAG00000008645)
Degu	MODERN SPECIES	91	PLIN5 (ENSODEG00000014740) ##7	PLIN4 (ENSODEG00000015715) #7	ENSODEG00000015495 #8	UBXN6 (ENSODEG00000015912) #9	CHAF1A (ENSODEG00000015861) #10	SH3GL1 (ENSODEG00000015344) #11	MPND (ENSODEG00000014317) #12	STAP2 (ENSODEG00000015068) #13	FSD1 (ENSODEG00000014478) #14	SHD (ENSODEG00000014897) #16	YJU2 (ENSODEG00000014993) #17	ENSODEG00000020237	EBI3 (ENSODEG00000014290) #18	ENSODEG00000014163 #19	SIRT6 (ENSODEG00000015363) #20	MAP2K2 (ENSODEG00000014670) #22	ZBTB7A (ENSODEG00000014027) #23	PIAS4 (ENSODEG00000015061) #24	ENSODEG00000014175 #25	DAPK3 (ENSODEG00000014160) #26	ENSODEG00000014763	GADD45B (ENSODEG00000014386)	GNG7 (ENSODEG00000014141)	DIRAS1 (ENSODEG00000020412)	SLC39A3 (ENSODEG00000014274)	SGTA (ENSODEG00000014332)	THOP1 (ENSODEG00000013736)	ENSODEG00000013996	DOHH (ENSODEG00000014181)	ENSODEG00000015846	NFIC (ENSODEG00000015267)
Guinea pig	MODERN SPECIES	253									STAP2 (ENSCPOG00000025858) #13	FSD1 (ENSCPOG00000019419) #14	SHD (ENSCPOG00000008098) #16	YJU2 (ENSCPOG00000000707) #17	EBI3 (ENSCPOG00000000706) #18	ENSCPOG00000006206 #19	CREB3L3 (ENSCPOG00000010134) #21	MAP2K2 (ENSCPOG00000025428) #22	ZBTB7A (ENSCPOG00000035268) #23	PIAS4 (ENSCPOG00000002364) #24	EEF2 (ENSCPOG00000015697) #25	DAPK3 (ENSCPOG00000031679) #26	ENSCPOG00000037980	GADD45B (ENSCPOG00000034176)	GNG7 (ENSCPOG00000033946)	SLC39A3 (ENSCPOG00000034643)	SGTA (ENSCPOG00000030366)	THOP1 (ENSCPOG00000021762)	DOHH (ENSCPOG00000035221)
Sciuridae	DUPLICATION
Sciuridae	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.k #22
Eurasian red squirrel	MODERN SPECIES	156	ENSSVLG00005015416	ENSSVLG00005015384	NAP1L2 (ENSSVLG00005015352)	CDX4 (ENSSVLG00005015316)	ENSSVLG00005015182	ZCCHC13 (ENSSVLG00005015163)	SLC16A2 (ENSSVLG00005015129)	RLIM (ENSSVLG00005015096)	NEXMIF (ENSSVLG00005015017)	ABCB7 (ENSSVLG00005014285)	UPRT (ENSSVLG00005014152)	ZDHHC15 (ENSSVLG00005014065)	MAGEE2 (ENSSVLG00005014015)	ENSSVLG00005013933	PBDC1 (ENSSVLG00005013885)	ENSSVLG00005013840 #22	MAGEE1 (ENSSVLG00005013812)	ENSSVLG00005013720	ENSSVLG00005013671	ENSSVLG00005013604	ENSSVLG00005013555	FGF16 (ENSSVLG00005013490)	ATRX (ENSSVLG00005013376)	ENSSVLG00005012812	ENSSVLG00005012706	ENSSVLG00005012657	ENSSVLG00005012574	ENSSVLG00005012533	ATP7A (ENSSVLG00005012051)	ENSSVLG00005011999	ENSSVLG00005011883
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.l #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	7	HDGFL2 (ENSSVLG00005018647) #8	UBXN6 (ENSSVLG00005018509) #9	CHAF1A (ENSSVLG00005018270) #10	SH3GL1 (ENSSVLG00005018172) #11	MPND (ENSSVLG00005017709) #12	ENSSVLG00005017600	STAP2 (ENSSVLG00005017361) #13	FSD1 (ENSSVLG00005017052) #14	ENSSVLG00005017014	SHD (ENSSVLG00005016880) #16	YJU2 (ENSSVLG00005016793) #17	EBI3 (ENSSVLG00005024929) #18	ANKRD24 (ENSSVLG00005024883) #19	SIRT6 (ENSSVLG00005024827) #20	CREB3L3 (ENSSVLG00005024770) #21	ENSSVLG00005024698 #22	ZBTB7A (ENSSVLG00005024657) #23	PIAS4 (ENSSVLG00005024634) #24	ENSSVLG00005024605 #25	DAPK3 (ENSSVLG00005024571) #26	ENSSVLG00005024541 #27	ATCAY (ENSSVLG00005024510) #28	ZFR2 (ENSSVLG00005024341) #29	MATK (ENSSVLG00005024229) #30	RAX2 (ENSSVLG00005024207) #31	MRPL54 (ENSSVLG00005024184) #32	TJP3 (ENSSVLG00005023962) #34	PIP5K1C (ENSSVLG00005023887) #35	CACTIN (ENSSVLG00005023836) #36	TBXA2R (ENSSVLG00005023817) #37	GIPC3 (ENSSVLG00005023804)
Eurasian red squirrel	MODERN SPECIES	13	FAM170B (ENSSVLG00005002335)	VSTM4 (ENSSVLG00005002356)	WDFY4 (ENSSVLG00005002424)	LRRC18 (ENSSVLG00005002547)	ARHGAP22 (ENSSVLG00005002587)	ENSSVLG00005002634	MAPK8 (ENSSVLG00005002686)	FRMPD2 (ENSSVLG00005002807)	ENSSVLG00005003026	PTPN20 (ENSSVLG00005003065)	GDF10 (ENSSVLG00005003156)	GDF2 (ENSSVLG00005003178)	RBP3 (ENSSVLG00005003192)	ENSSVLG00005003212	ENSSVLG00005003224	ENSSVLG00005003322 #22	ENSSVLG00005003335	ENSSVLG00005003349	ENSSVLG00005003360	ENSSVLG00005003375	ENSSVLG00005003408	ENSSVLG00005003415	ENSSVLG00005003421	ENSSVLG00005003435	ENSSVLG00005003459	ENSSVLG00005003469	ENSSVLG00005003498	ENSSVLG00005003511	ENSSVLG00005003522	ENSSVLG00005003534	ENSSVLG00005003579
Marmotini	ANCESTRAL SPECIES	24	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.l #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Alpin marmot	MODERN SPECIES	88	MYDGF (ENSMMMG00000018460)	ENSMMMG00000018426	LRG1 (ENSMMMG00000018424)	ENSMMMG00000018410 ##7	HDGFL2 (ENSMMMG00000018325) #8	UBXN6 (ENSMMMG00000018303) #9	CHAF1A (ENSMMMG00000018263) #10	SH3GL1 (ENSMMMG00000018246) #11	MPND (ENSMMMG00000018208) #12	STAP2 (ENSMMMG00000018200) #13	FSD1 (ENSMMMG00000018181) #14	SHD (ENSMMMG00000018157) #16	YJU2 (ENSMMMG00000018139) #17	ENSMMMG00000018130 #18	ANKRD24 (ENSMMMG00000018078) #19	MAP2K2 (ENSMMMG00000017211) #22	PIAS4 (ENSMMMG00000017032) #24	EEF2 (ENSMMMG00000017019) #25	DAPK3 (ENSMMMG00000017015) #26	NMRK2 (ENSMMMG00000017009) #27	ZFR2 (ENSMMMG00000016959) #29	APBA3 (ENSMMMG00000016885) #33	TJP3 (ENSMMMG00000016855) #34	CACTIN (ENSMMMG00000016832) #36	ENSMMMG00000016827	GIPC3 (ENSMMMG00000016813)	HMG20B (ENSMMMG00000016794)	ENSMMMG00000016792	ENSMMMG00000016780	DOHH (ENSMMMG00000016778)	ENSMMMG00000016774
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.l #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Squirrel	MODERN SPECIES	188	ENSSTOG00000030331	HDGFL2 (ENSSTOG00000007383) #8	UBXN6 (ENSSTOG00000014906) #9	CHAF1A (ENSSTOG00000014889) #10	SH3GL1 (ENSSTOG00000008579) #11	MPND (ENSSTOG00000008666) #12	STAP2 (ENSSTOG00000022594) #13	FSD1 (ENSSTOG00000008010) #14	SHD (ENSSTOG00000024753) #16	YJU2 (ENSSTOG00000014684) #17	EBI3 (ENSSTOG00000024345) #18	ENSSTOG00000024418	ENSSTOG00000032271 #19	SIRT6 (ENSSTOG00000022298) #20	CREB3L3 (ENSSTOG00000028871) #21	MAP2K2 (ENSSTOG00000002366) #22	ZBTB7A (ENSSTOG00000026956) #23	PIAS4 (ENSSTOG00000012472) #24	EEF2 (ENSSTOG00000005050) #25	DAPK3 (ENSSTOG00000005038) #26	NMRK2 (ENSSTOG00000021661) #27	ATCAY (ENSSTOG00000026376) #28	ZFR2 (ENSSTOG00000025821) #29	MATK (ENSSTOG00000011892) #30	RAX2 (ENSSTOG00000024315) #31	MRPL54 (ENSSTOG00000022378) #32	APBA3 (ENSSTOG00000000352) #33	TJP3 (ENSSTOG00000024962) #34	PIP5K1C (ENSSTOG00000023021) #35	CACTIN (ENSSTOG00000001235) #36	TBXA2R (ENSSTOG00000028290) #37
Arctic ground squirrel	MODERN SPECIES	301	PLIN5 (ENSUPAG00010009919) ##7	ENSUPAG00010009913 #7	HDGFL2 (ENSUPAG00010009901) #8	UBXN6 (ENSUPAG00010009881) #9	CHAF1A (ENSUPAG00010009868) #10	SH3GL1 (ENSUPAG00010009851) #11	MPND (ENSUPAG00010009625) #12	STAP2 (ENSUPAG00010009594) #13	FSD1 (ENSUPAG00010009576) #14	SHD (ENSUPAG00010009570) #16	YJU2 (ENSUPAG00010009548) #17	EBI3 (ENSUPAG00010009541) #18	ANKRD24 (ENSUPAG00010009488) #19	SIRT6 (ENSUPAG00010009478) #20	CREB3L3 (ENSUPAG00010009456) #21	MAP2K2 (ENSUPAG00010009423) #22	ZBTB7A (ENSUPAG00010009414) #23	PIAS4 (ENSUPAG00010009393) #24	EEF2 (ENSUPAG00010009366) #25	DAPK3 (ENSUPAG00010009346) #26	NMRK2 (ENSUPAG00010009304) #27	ATCAY (ENSUPAG00010009286) #28	ZFR2 (ENSUPAG00010009277) #29	MATK (ENSUPAG00010008858) #30	RAX2 (ENSUPAG00010008848) #31	MRPL54 (ENSUPAG00010008838) #32	APBA3 (ENSUPAG00010008831) #33	TJP3 (ENSUPAG00010008756) #34	PIP5K1C (ENSUPAG00010008552) #35	CACTIN (ENSUPAG00010008542) #36	TBXA2R (ENSUPAG00010008535) #37
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Muroidea	ANCESTRAL SPECIES	32	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753.j	ENSGT00940000159993	ENSGT00390000014000.l	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753.j	ENSGT00940000159993	ENSGT00390000014000.l	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Northern American deer mouse	MODERN SPECIES	14	Sf3a2 (ENSPEMG00000021288)	Amh (ENSPEMG00000022697)	Lingo3 (ENSPEMG00000013558)	Lsm7 (ENSPEMG00000027858)	ENSPEMG00000031069	ENSPEMG00000022141	Tmprss9 (ENSPEMG00000017231)	Timm13 (ENSPEMG00000011224)	Lmnb2 (ENSPEMG00000021474)	Gadd45b (ENSPEMG00000021504)	Diras1 (ENSPEMG00000015735)	Slc39a3 (ENSPEMG00000020829)	Sgta (ENSPEMG00000020795)	Thop1 (ENSPEMG00000023842)	Creb3l3 (ENSPEMG00000008823) #21	Map2k2 (ENSPEMG00000021952) #22	Zbtb7a (ENSPEMG00000025614) #23	Pias4 (ENSPEMG00000021214) #24	Eef2 (ENSPEMG00000021167) #25	ENSPEMG00000020977	Nmrk2 (ENSPEMG00000021630) #27	Atcay (ENSPEMG00000021027) #28	Zfr2 (ENSPEMG00000020763) #29	Matk (ENSPEMG00000020804) #30	Mrpl54 (ENSPEMG00000022929) #32	Apba3 (ENSPEMG00000021227) #33	Tjp3 (ENSPEMG00000021396) #34	Pip5k1c (ENSPEMG00000020543) #35	Cactin (ENSPEMG00000021732) #36	Tbxa2r (ENSPEMG00000015376) #37	Gipc3 (ENSPEMG00000014161)
Prairie vole	MODERN SPECIES	349	ENSMOCG00000010141	ENSMOCG00000022351	Lingo3 (ENSMOCG00000020965)	Lsm7 (ENSMOCG00000016925)	Sppl2b (ENSMOCG00000021520)	Tmprss9 (ENSMOCG00000018694)	Timm13 (ENSMOCG00000010859)	Lmnb2 (ENSMOCG00000002928)	Gadd45b (ENSMOCG00000019277)	Gng7 (ENSMOCG00000016990)	Diras1 (ENSMOCG00000000231)	Slc39a3 (ENSMOCG00000013732)	Sgta (ENSMOCG00000001498)	Thop1 (ENSMOCG00000001107)	Creb3l3 (ENSMOCG00000013966) #21	Map2k2 (ENSMOCG00000022138) #22	Zbtb7a (ENSMOCG00000010291) #23	Pias4 (ENSMOCG00000022430) #24	ENSMOCG00000019369 #25	Dapk3 (ENSMOCG00000019017) #26	Nmrk2 (ENSMOCG00000003146) #27	Atcay (ENSMOCG00000011102) #28	Zfr2 (ENSMOCG00000010727) #29	Matk (ENSMOCG00000001438) #30	Mrpl54 (ENSMOCG00000017895) #32	Apba3 (ENSMOCG00000015694) #33	Tjp3 (ENSMOCG00000013578) #34	Pip5k1c (ENSMOCG00000008488) #35	Cactin (ENSMOCG00000011992) #36	Tbxa2r (ENSMOCG00000005701) #37	Gipc3 (ENSMOCG00000002475)
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753.j	ENSGT00940000159993	ENSGT00390000014000.l	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Golden Hamster	MODERN SPECIES	764	Jsrp1 (ENSMAUG00000013914)	Oaz1 (ENSMAUG00000011178)	Lingo3 (ENSMAUG00000009853)	Lsm7 (ENSMAUG00000009276)	Sppl2b (ENSMAUG00000020905)	Tmprss9 (ENSMAUG00000008320)	Timm13 (ENSMAUG00000013865)	Lmnb2 (ENSMAUG00000019979)	Gadd45b (ENSMAUG00000015240)	Gng7 (ENSMAUG00000009781)	Diras1 (ENSMAUG00000021227)	Slc39a3 (ENSMAUG00000021542)	Sgta (ENSMAUG00000004385)	Thop1 (ENSMAUG00000016713)	Creb3l3 (ENSMAUG00000020928) #21	Map2k2 (ENSMAUG00000011695) #22	Zbtb7a (ENSMAUG00000019026) #23	Pias4 (ENSMAUG00000012696) #24	Eef2 (ENSMAUG00000007062) #25	Dapk3 (ENSMAUG00000021234) #26	Nmrk2 (ENSMAUG00000003333) #27	Atcay (ENSMAUG00000017532) #28	Zfr2 (ENSMAUG00000016438) #29	Matk (ENSMAUG00000019712) #30	Mrpl54 (ENSMAUG00000009543) #32	Apba3 (ENSMAUG00000007859) #33	Tjp3 (ENSMAUG00000010092) #34	Pip5k1c (ENSMAUG00000014134) #35	Cactin (ENSMAUG00000011643) #36	Tbxa2r (ENSMAUG00000015276) #37	Gipc3 (ENSMAUG00000021524)
Chinese hamster chok1gshd	MODERN SPECIES	2	Jsrp1 (ENSCGRG00001012783)	Oaz1 (ENSCGRG00001013579)	Lingo3 (ENSCGRG00001011202)	ENSCGRG00001000807	Sppl2b (ENSCGRG00001001858)	Tmprss9 (ENSCGRG00001004422)	Timm13 (ENSCGRG00001013045)	Lmnb2 (ENSCGRG00001006502)	Gadd45b (ENSCGRG00001024479)	Gng7 (ENSCGRG00001003146)	Diras1 (ENSCGRG00001010873)	Slc39a3 (ENSCGRG00001010295)	Sgta (ENSCGRG00001008900)	Thop1 (ENSCGRG00001024327)	Creb3l3 (ENSCGRG00001004276) #21	Map2k2 (ENSCGRG00001013300) #22	Zbtb7a (ENSCGRG00001019218) #23	Pias4 (ENSCGRG00001019465) #24	Eef2 (ENSCGRG00001021031) #25	Dapk3 (ENSCGRG00001006998) #26	Nmrk2 (ENSCGRG00001016553) #27	Atcay (ENSCGRG00001017209) #28	Zfr2 (ENSCGRG00001019870) #29	Matk (ENSCGRG00001015278) #30	Mrpl54 (ENSCGRG00001019482) #32	Apba3 (ENSCGRG00001019836) #33	Tjp3 (ENSCGRG00001001459) #34	Pip5k1c (ENSCGRG00001017002) #35	Cactin (ENSCGRG00001021287) #36	Tbxa2r (ENSCGRG00001014446) #37	Gipc3 (ENSCGRG00001016082)
Murinae	ANCESTRAL SPECIES	25	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Mus	ANCESTRAL SPECIES	15	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a.c.b #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a.c.b #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Mouse	MODERN SPECIES	1	Jsrp1 (ENSMUSG00000020216)	Oaz1 (ENSMUSG00000035242)	Lingo3 (ENSMUSG00000051067)	Lsm7 (ENSMUSG00000035215)	Sppl2b (ENSMUSG00000035206)	Tmprss9 (ENSMUSG00000059406)	Timm13 (ENSMUSG00000020219)	Lmnb2 (ENSMUSG00000062075)	Gadd45b (ENSMUSG00000015312)	Gng7 (ENSMUSG00000048240)	Diras1 (ENSMUSG00000043670)	Slc39a3 (ENSMUSG00000046822)	Sgta (ENSMUSG00000004937)	Thop1 (ENSMUSG00000004929)	Creb3l3 (ENSMUSG00000035041) #21	Map2k2 (ENSMUSG00000035027) #22	Zbtb7a (ENSMUSG00000035011) #23	Pias4 (ENSMUSG00000004934) #24	Eef2 (ENSMUSG00000034994) #25	Dapk3 (ENSMUSG00000034974) #26	Nmrk2 (ENSMUSG00000004939) #27	Atcay (ENSMUSG00000034958) #28	Zfr2 (ENSMUSG00000034949) #29	Matk (ENSMUSG00000004933) #30	Mrpl54 (ENSMUSG00000034932) #32	Apba3 (ENSMUSG00000004931) #33	Tjp3 (ENSMUSG00000034917) #34	Pip5k1c (ENSMUSG00000034902) #35	Cactin (ENSMUSG00000034889) #36	Tbxa2r (ENSMUSG00000034881) #37	Gipc3 (ENSMUSG00000034872)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a.c.b #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
spretus	MODERN SPECIES	1	Jsrp1 (MGP_SPRETEiJ_G0016422)	MGP_SPRETEiJ_G0016423	Lingo3 (MGP_SPRETEiJ_G0016424)	Lsm7 (MGP_SPRETEiJ_G0016425)	Sppl2b (MGP_SPRETEiJ_G0016426)	Tmprss9 (MGP_SPRETEiJ_G0016427)	Timm13 (MGP_SPRETEiJ_G0016428)	Lmnb2 (MGP_SPRETEiJ_G0016429)	Gadd45b (MGP_SPRETEiJ_G0016430)	Gng7 (MGP_SPRETEiJ_G0016431)	Diras1 (MGP_SPRETEiJ_G0016432)	Slc39a3 (MGP_SPRETEiJ_G0016433)	Sgta (MGP_SPRETEiJ_G0016434)	Thop1 (MGP_SPRETEiJ_G0016435)	Creb3l3 (MGP_SPRETEiJ_G0016436) #21	Map2k2 (MGP_SPRETEiJ_G0016437) #22	Zbtb7a (MGP_SPRETEiJ_G0016438) #23	Pias4 (MGP_SPRETEiJ_G0016439) #24	Eef2 (MGP_SPRETEiJ_G0016440) #25	MGP_SPRETEiJ_G0016441	Dapk3 (MGP_SPRETEiJ_G0016442) #26	Nmrk2 (MGP_SPRETEiJ_G0016443) #27	Atcay (MGP_SPRETEiJ_G0016444) #28	Zfr2 (MGP_SPRETEiJ_G0016445) #29	Matk (MGP_SPRETEiJ_G0016446) #30	Mrpl54 (MGP_SPRETEiJ_G0016447) #32	Apba3 (MGP_SPRETEiJ_G0016448) #33	Tjp3 (MGP_SPRETEiJ_G0016449) #34	Pip5k1c (MGP_SPRETEiJ_G0016450) #35	Cactin (MGP_SPRETEiJ_G0016451) #36	Tbxa2r (MGP_SPRETEiJ_G0016452) #37
Steppe mouse	MODERN SPECIES	2590									Gadd45b (ENSMSIG00000024681)	Gng7 (ENSMSIG00000024661)	Diras1 (ENSMSIG00000024655)	Slc39a3 (ENSMSIG00000024644)	Sgta (ENSMSIG00000024618)	Thop1 (ENSMSIG00000024603)	Creb3l3 (ENSMSIG00000024590) #21	Map2k2 (ENSMSIG00000024534) #22	ENSMSIG00000024524 #23	Pias4 (ENSMSIG00000024505) #24	ENSMSIG00000024474 #25	Dapk3 (ENSMSIG00000024443) #26	Nmrk2 (ENSMSIG00000024431) #27	Atcay (ENSMSIG00000024422) #28	Zfr2 (ENSMSIG00000024392) #29	Matk (ENSMSIG00000024338) #30	ENSMSIG00000024325 #32	Apba3 (ENSMSIG00000024307) #33	Tjp3 (ENSMSIG00000024242) #34	Pip5k1c (ENSMSIG00000024074) #35	Cactin (ENSMSIG00000024042) #36	Tbxa2r (ENSMSIG00000024021) #37	Gipc3 (ENSMSIG00000024007)
Ryukyu mouse	MODERN SPECIES	1	Jsrp1 (MGP_CAROLIEiJ_G0015604)	MGP_CAROLIEiJ_G0015605	Lingo3 (MGP_CAROLIEiJ_G0015606)	Lsm7 (MGP_CAROLIEiJ_G0015607)	Sppl2b (MGP_CAROLIEiJ_G0015608)	Tmprss9 (MGP_CAROLIEiJ_G0015609)	Timm13 (MGP_CAROLIEiJ_G0015610)	Lmnb2 (MGP_CAROLIEiJ_G0015611)	Gadd45b (MGP_CAROLIEiJ_G0015612)	Gng7 (MGP_CAROLIEiJ_G0015613)	Diras1 (MGP_CAROLIEiJ_G0015614)	Slc39a3 (MGP_CAROLIEiJ_G0015615)	Sgta (MGP_CAROLIEiJ_G0015616)	Thop1 (MGP_CAROLIEiJ_G0015617)	Creb3l3 (MGP_CAROLIEiJ_G0015618) #21	Map2k2 (MGP_CAROLIEiJ_G0015619) #22	Zbtb7a (MGP_CAROLIEiJ_G0015620) #23	Pias4 (MGP_CAROLIEiJ_G0015621) #24	Eef2 (MGP_CAROLIEiJ_G0015622) #25	MGP_CAROLIEiJ_G0015623	Dapk3 (MGP_CAROLIEiJ_G0015624) #26	Nmrk2 (MGP_CAROLIEiJ_G0015625) #27	Atcay (MGP_CAROLIEiJ_G0015626) #28	Zfr2 (MGP_CAROLIEiJ_G0015627) #29	Matk (MGP_CAROLIEiJ_G0015628) #30	Mrpl54 (MGP_CAROLIEiJ_G0015629) #32	Apba3 (MGP_CAROLIEiJ_G0015630) #33	Tjp3 (MGP_CAROLIEiJ_G0015631) #34	Pip5k1c (MGP_CAROLIEiJ_G0015632) #35	Cactin (MGP_CAROLIEiJ_G0015633) #36	Tbxa2r (MGP_CAROLIEiJ_G0015634) #37
Shrew mouse	MODERN SPECIES	22	Jsrp1 (MGP_PahariEiJ_G0031017)	MGP_PahariEiJ_G0031018	Lingo3 (MGP_PahariEiJ_G0031019)	Lsm7 (MGP_PahariEiJ_G0031020)	Sppl2b (MGP_PahariEiJ_G0031021)	Tmprss9 (MGP_PahariEiJ_G0031022)	Timm13 (MGP_PahariEiJ_G0031023)	Lmnb2 (MGP_PahariEiJ_G0031024)	Gadd45b (MGP_PahariEiJ_G0031025)	Gng7 (MGP_PahariEiJ_G0031026)	Diras1 (MGP_PahariEiJ_G0031027)	Slc39a3 (MGP_PahariEiJ_G0031028)	Sgta (MGP_PahariEiJ_G0031029)	Thop1 (MGP_PahariEiJ_G0031030)	Creb3l3 (MGP_PahariEiJ_G0031031) #21	Map2k2 (MGP_PahariEiJ_G0031032) #22	Zbtb7a (MGP_PahariEiJ_G0031033) #23	Pias4 (MGP_PahariEiJ_G0031034) #24	Eef2 (MGP_PahariEiJ_G0031035) #25	MGP_PahariEiJ_G0031036	Dapk3 (MGP_PahariEiJ_G0031037) #26	Nmrk2 (MGP_PahariEiJ_G0031038) #27	Atcay (MGP_PahariEiJ_G0031039) #28	Zfr2 (MGP_PahariEiJ_G0031040) #29	Matk (MGP_PahariEiJ_G0031041) #30	Mrpl54 (MGP_PahariEiJ_G0031042) #32	Apba3 (MGP_PahariEiJ_G0031043) #33	Tjp3 (MGP_PahariEiJ_G0031044) #34	Pip5k1c (MGP_PahariEiJ_G0031045) #35	Cactin (MGP_PahariEiJ_G0031046) #36	Tbxa2r (MGP_PahariEiJ_G0031047) #37
Rat	MODERN SPECIES	17	Sf3a2 (ENSRNOG00000019349)	Amh (ENSRNOG00000019377)	Jsrp1 (ENSRNOG00000032951)	Oaz1 (ENSRNOG00000019459)	Lingo3 (ENSRNOG00000032569)	Lsm7 (ENSRNOG00000019552)	Sppl2b (ENSRNOG00000057881)	Tmprss9 (ENSRNOG00000032429)	Lmnb2 (ENSRNOG00000025742)	Gadd45b (ENSRNOG00000019822)	Diras1 (ENSRNOG00000029738)	Slc39a3 (ENSRNOG00000045524)	Sgta (ENSRNOG00000019891)	Thop1 (ENSRNOG00000019924)	Creb3l3 (ENSRNOG00000032202) #21	Map2k2 (ENSRNOG00000020005) #22	Zbtb7a (ENSRNOG00000020161) #23	Pias4 (ENSRNOG00000020230) #24	Eef2 (ENSRNOG00000020266) #25	Dapk3 (ENSRNOG00000020383) #26	Nmrk2 (ENSRNOG00000042897) #27	Atcay (ENSRNOG00000020407) #28	Zfr2 (ENSRNOG00000020416) #29	Matk (ENSRNOG00000020431) #30	Mrpl54 (ENSRNOG00000020464) #32	Apba3 (ENSRNOG00000020466) #33	Tjp3 (ENSRNOG00000020501) #34	Pip5k1c (ENSRNOG00000020577) #35	Cactin (ENSRNOG00000039852) #36	Tbxa2r (ENSRNOG00000020585) #37	Hmg20b (ENSRNOG00000020601)
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Jsrp1 (ENSNGAG00000023304)	ENSNGAG00000021735	Lingo3 (ENSNGAG00000021849)	Lsm7 (ENSNGAG00000021637)	Sppl2b (ENSNGAG00000004736)	Tmprss9 (ENSNGAG00000022790)	Timm13 (ENSNGAG00000023249)	Lmnb2 (ENSNGAG00000021462)	Gadd45b (ENSNGAG00000021952)	Gng7 (ENSNGAG00000020927)	Diras1 (ENSNGAG00000023268)	Slc39a3 (ENSNGAG00000021304)	Sgta (ENSNGAG00000014219)	Thop1 (ENSNGAG00000022879)	Creb3l3 (ENSNGAG00000021009) #21	Map2k2 (ENSNGAG00000023259) #22	Zbtb7a (ENSNGAG00000021628) #23	Pias4 (ENSNGAG00000023389) #24	Eef2 (ENSNGAG00000001879) #25	Dapk3 (ENSNGAG00000020954) #26	Nmrk2 (ENSNGAG00000020749) #27	Atcay (ENSNGAG00000022622) #28	Zfr2 (ENSNGAG00000021831) #29	Matk (ENSNGAG00000021707) #30	Mrpl54 (ENSNGAG00000021044) #32	Apba3 (ENSNGAG00000022342) #33	Tjp3 (ENSNGAG00000001234) #34	Pip5k1c (ENSNGAG00000021521) #35	Cactin (ENSNGAG00000020699) #36	Tbxa2r (ENSNGAG00000023199) #37	Gipc3 (ENSNGAG00000022438)
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	55	ENSJJAG00000022160	Oaz1 (ENSJJAG00000005334)	Lingo3 (ENSJJAG00000012763)	Lsm7 (ENSJJAG00000001936)	Sppl2b (ENSJJAG00000014592)	Tmprss9 (ENSJJAG00000022597)	Timm13 (ENSJJAG00000021811)	Lmnb2 (ENSJJAG00000023416)	Gadd45b (ENSJJAG00000020166)	Gng7 (ENSJJAG00000022350)	Diras1 (ENSJJAG00000012843)	Slc39a3 (ENSJJAG00000014409)	ENSJJAG00000018418	Thop1 (ENSJJAG00000007816)	Creb3l3 (ENSJJAG00000019067) #21	ENSJJAG00000016736 #22	Zbtb7a (ENSJJAG00000006307) #23	Pias4 (ENSJJAG00000012061) #24	Eef2 (ENSJJAG00000017122) #25	Nmrk2 (ENSJJAG00000000373) #27	Atcay (ENSJJAG00000007757) #28	Zfr2 (ENSJJAG00000014635) #29	Matk (ENSJJAG00000017018) #30	Mrpl54 (ENSJJAG00000020405) #32	Apba3 (ENSJJAG00000013868) #33	Tjp3 (ENSJJAG00000020883) #34	Pip5k1c (ENSJJAG00000014211) #35	Cactin (ENSJJAG00000021015) #36	Tbxa2r (ENSJJAG00000015378) #37	Hmg20b (ENSJJAG00000014863)	Mfsd12 (ENSJJAG00000023170)
Lesser Egyptian jerboa	MODERN SPECIES	80	ENSJJAG00000021614	Pja1 (ENSJJAG00000013566)	Nalf2 (ENSJJAG00000015886)	ENSJJAG00000018615	Eda (ENSJJAG00000022345)	Awat2 (ENSJJAG00000012159)	Igbp1 (ENSJJAG00000012275)	Dgat2l6 (ENSJJAG00000008254)	Awat1 (ENSJJAG00000023743)	P2ry4 (ENSJJAG00000019687)	ENSJJAG00000023597	Pdzd11 (ENSJJAG00000020264)	Kif4 (ENSJJAG00000000294)	Gdpd2 (ENSJJAG00000014781)	Dlg3 (ENSJJAG00000014971)	ENSJJAG00000016532 #22	Tex11 (ENSJJAG00000018454)	Slc7a3 (ENSJJAG00000019367)	ENSJJAG00000022270	Snx12 (ENSJJAG00000018084)	Foxo4 (ENSJJAG00000013280)	Gm614 (ENSJJAG00000019595)	Il2rg (ENSJJAG00000013180)	Med12 (ENSJJAG00000011766)	Nlgn3 (ENSJJAG00000022749)	Gjb1 (ENSJJAG00000015275)	Zmym3 (ENSJJAG00000017423)	ENSJJAG00000017151	Itgb1bp2 (ENSJJAG00000022114)	Taf1 (ENSJJAG00000016231)	ENSJJAG00000016438
Kangaroo rat	MODERN SPECIES	383	Lrg1 (ENSDORG00000024968)	ENSDORG00000024106 #7	ENSDORG00000014228 #8	Ubxn6 (ENSDORG00000014226) #9	Sh3gl1 (ENSDORG00000012390) #11	Mpnd (ENSDORG00000012389) #12	Stap2 (ENSDORG00000012387) #13	Fsd1 (ENSDORG00000012386) #14	Shd (ENSDORG00000006647) #16	Yju2 (ENSDORG00000006645) #17	Ebi3 (ENSDORG00000006642) #18	ENSDORG00000006638 #19	ENSDORG00000027304	Sirt6 (ENSDORG00000003338) #20	Creb3l3 (ENSDORG00000003335) #21	Map2k2 (ENSDORG00000001269) #22	Zbtb7a (ENSDORG00000002712) #23	Pias4 (ENSDORG00000002710) #24	Eef2 (ENSDORG00000012229) #25	ENSDORG00000012226	Atcay (ENSDORG00000000661) #28	Lsm7 (ENSDORG00000024460)	Sppl2b (ENSDORG00000004034)	Tmprss9 (ENSDORG00000002599)	Timm13 (ENSDORG00000015661)	Lmnb2 (ENSDORG00000002602)	Gadd45b (ENSDORG00000025421)	Gng7 (ENSDORG00000001766)	Diras1 (ENSDORG00000006599)	Slc39a3 (ENSDORG00000029412)	Sgta (ENSDORG00000009907)
Tree shrew	MODERN SPECIES	1177																ENSTBEG00000014036 #22
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Carnivora	ANCESTRAL SPECIES	6	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Felidae	ANCESTRAL SPECIES	21	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Panthera	ANCESTRAL SPECIES	15	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Tiger	MODERN SPECIES	54	MYDGF (ENSPTIG00000011948)	ENSPTIG00000013782	LRG1 (ENSPTIG00000014671)	PLIN5 (ENSPTIG00000015119) ##7	ENSPTIG00000016159 #8	CHAF1A (ENSPTIG00000017273) #10	ENSPTIG00000018467 #11	MPND (ENSPTIG00000018724) #12	STAP2 (ENSPTIG00000020894) #13	SHD (ENSPTIG00000021704) #16	YJU2 (ENSPTIG00000021858) #17	EBI3 (ENSPTIG00000021918) #18	ANKRD24 (ENSPTIG00000021988) #19	SIRT6 (ENSPTIG00000006083) #20	CREB3L3 (ENSPTIG00000008650) #21	MAP2K2 (ENSPTIG00000010880) #22	PIAS4 (ENSPTIG00000012378) #24	EEF2 (ENSPTIG00000012837) #25	ATCAY (ENSPTIG00000013063) #28	ENSPTIG00000015790 #30	MRPL54 (ENSPTIG00000017727) #32	PIP5K1C (ENSPTIG00000018042) #35	GIPC3 (ENSPTIG00000020400)	HMG20B (ENSPTIG00000021062)	FZR1 (ENSPTIG00000021304)	SMIM24 (ENSPTIG00000021624)	NFIC (ENSPTIG00000021743)	CELF5 (ENSPTIG00000005338)	GNA15 (ENSPTIG00000006851)	ENSPTIG00000007808	ENSPTIG00000008105
Panthera_a	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
lion	MODERN SPECIES	236	LRG1 (ENSPLOG00000020688)	PLIN5 (ENSPLOG00000020711) ##7	HDGFL2 (ENSPLOG00000020735) #8	UBXN6 (ENSPLOG00000020762) #9	CHAF1A (ENSPLOG00000020794) #10	SH3GL1 (ENSPLOG00000020865) #11	MPND (ENSPLOG00000020952) #12	STAP2 (ENSPLOG00000021151) #13	FSD1 (ENSPLOG00000021212) #14	SHD (ENSPLOG00000021324) #16	YJU2 (ENSPLOG00000021362) #17	EBI3 (ENSPLOG00000021391) #18	ANKRD24 (ENSPLOG00000021414) #19	SIRT6 (ENSPLOG00000021479) #20	CREB3L3 (ENSPLOG00000021514) #21	MAP2K2 (ENSPLOG00000021607) #22
leopard	MODERN SPECIES	134	PLIN5 (ENSPPRG00000018474) ##7	PLIN4 (ENSPPRG00000016994) #7	HDGFL2 (ENSPPRG00000016137) #8	UBXN6 (ENSPPRG00000013698) #9	CHAF1A (ENSPPRG00000013271) #10	SH3GL1 (ENSPPRG00000012445) #11	MPND (ENSPPRG00000010341) #12	STAP2 (ENSPPRG00000008724) #13	FSD1 (ENSPPRG00000007977) #14	SHD (ENSPPRG00000007526) #16	YJU2 (ENSPPRG00000007225) #17	EBI3 (ENSPPRG00000007004) #18	ANKRD24 (ENSPPRG00000006734) #19	ENSPPRG00000005149 #20	CREB3L3 (ENSPPRG00000004717) #21	MAP2K2 (ENSPPRG00000003088) #22	ZBTB7A (ENSPPRG00000002971) #23	PIAS4 (ENSPPRG00000002907) #24	EEF2 (ENSPPRG00000002841) #25	DAPK3 (ENSPPRG00000002025) #26	ATCAY (ENSPPRG00000001356) #28	ZFR2 (ENSPPRG00000000527) #29	MATK (ENSPPRG00000017992) #30	RAX2 (ENSPPRG00000012460) #31	MRPL54 (ENSPPRG00000012325) #32	APBA3 (ENSPPRG00000012058) #33	TJP3 (ENSPPRG00000011837) #34	PIP5K1C (ENSPPRG00000010065) #35	CACTIN (ENSPPRG00000007007) #36	TBXA2R (ENSPPRG00000006108) #37	GIPC3 (ENSPPRG00000006047)
Cat	MODERN SPECIES	1	LRG1 (ENSFCAG00000045420)	PLIN5 (ENSFCAG00000018948) ##7	HDGFL2 (ENSFCAG00000006283) #8	UBXN6 (ENSFCAG00000027049) #9	CHAF1A (ENSFCAG00000014158) #10	SH3GL1 (ENSFCAG00000025662) #11	MPND (ENSFCAG00000019038) #12	STAP2 (ENSFCAG00000021949) #13	FSD1 (ENSFCAG00000014156) #14	SHD (ENSFCAG00000014152) #16	YJU2 (ENSFCAG00000014150) #17	EBI3 (ENSFCAG00000014148) #18	ANKRD24 (ENSFCAG00000029510) #19	SIRT6 (ENSFCAG00000014140) #20	CREB3L3 (ENSFCAG00000014139) #21	MAP2K2 (ENSFCAG00000014137) #22	ZBTB7A (ENSFCAG00000045801) #23	PIAS4 (ENSFCAG00000018666) #24	EEF2 (ENSFCAG00000000909) #25	DAPK3 (ENSFCAG00000013501) #26	ATCAY (ENSFCAG00000013498) #28	ZFR2 (ENSFCAG00000007145) #29	MATK (ENSFCAG00000026653) #30	RAX2 (ENSFCAG00000040863) #31	MRPL54 (ENSFCAG00000007144) #32	APBA3 (ENSFCAG00000019172) #33	TJP3 (ENSFCAG00000007142) #34	PIP5K1C (ENSFCAG00000007139) #35	CACTIN (ENSFCAG00000023235) #36	TBXA2R (ENSFCAG00000012120) #37	ENSFCAG00000051232
Caniformia	ANCESTRAL SPECIES	4	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Canidae	ANCESTRAL SPECIES		ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Red fox	MODERN SPECIES	163	PLIN4 (ENSVVUG00000008610) #7	HDGFL2 (ENSVVUG00000008590) #8	UBXN6 (ENSVVUG00000008372) #9	CHAF1A (ENSVVUG00000008352) #10	SH3GL1 (ENSVVUG00000008332) #11	MPND (ENSVVUG00000008330) #12	STAP2 (ENSVVUG00000008284) #13	FSD1 (ENSVVUG00000008262) #14	ENSVVUG00000008258 #15	SHD (ENSVVUG00000008254) #16	YJU2 (ENSVVUG00000008249) #17	EBI3 (ENSVVUG00000008242) #18	ANKRD24 (ENSVVUG00000008223) #19	SIRT6 (ENSVVUG00000008210) #20	CREB3L3 (ENSVVUG00000008198) #21	MAP2K2 (ENSVVUG00000008089) #22	PIAS4 (ENSVVUG00000008067) #24	EEF2 (ENSVVUG00000004661) #25	DAPK3 (ENSVVUG00000004576) #26	ATCAY (ENSVVUG00000004561) #28	ZFR2 (ENSVVUG00000004526) #29	MATK (ENSVVUG00000004432) #30	RAX2 (ENSVVUG00000004425) #31	MRPL54 (ENSVVUG00000004420) #32	APBA3 (ENSVVUG00000004405) #33	TJP3 (ENSVVUG00000003419) #34	PIP5K1C (ENSVVUG00000003369) #35	CACTIN (ENSVVUG00000003362) #36	TBXA2R (ENSVVUG00000003357) #37	GIPC3 (ENSVVUG00000003327)	HMG20B (ENSVVUG00000003300)
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662.y #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Dingo	MODERN SPECIES	112	PLIN5 (ENSCAFG00020018636) ##7	PLIN4 (ENSCAFG00020018631) #7	HDGFL2 (ENSCAFG00020018626) #8	UBXN6 (ENSCAFG00020018624) #9	CHAF1A (ENSCAFG00020018600) #10	SH3GL1 (ENSCAFG00020018591) #11	MPND (ENSCAFG00020018538) #12	STAP2 (ENSCAFG00020018528) #13	FSD1 (ENSCAFG00020018523) #14	SHD (ENSCAFG00020018520) #16	YJU2 (ENSCAFG00020018512) #17	EBI3 (ENSCAFG00020018510) #18	ANKRD24 (ENSCAFG00020018503) #19	SIRT6 (ENSCAFG00020018493) #20	CREB3L3 (ENSCAFG00020018486) #21	MAP2K2 (ENSCAFG00020018484) #22	ZBTB7A (ENSCAFG00020018481) #23	PIAS4 (ENSCAFG00020018476) #24	ENSCAFG00020018386 #25	DAPK3 (ENSCAFG00020018374) #26	ENSCAFG00020018372	ATCAY (ENSCAFG00020018366) #28	ZFR2 (ENSCAFG00020018341) #29	MATK (ENSCAFG00020018336) #30	RAX2 (ENSCAFG00020018334) #31	MRPL54 (ENSCAFG00020018333) #32	APBA3 (ENSCAFG00020018330) #33	TJP3 (ENSCAFG00020018326) #34	PIP5K1C (ENSCAFG00020018324) #35	CACTIN (ENSCAFG00020018320) #36	TBXA2R (ENSCAFG00020018318) #37
Dog	MODERN SPECIES	12	PLIN4 (ENSCAFG00845014617) #7	UBXN6 (ENSCAFG00845014671) #9	CHAF1A (ENSCAFG00845014711) #10	SH3GL1 (ENSCAFG00845014754) #11	MPND (ENSCAFG00845014863) #12	STAP2 (ENSCAFG00845015051) #13	FSD1 (ENSCAFG00845015189) #14	ENSCAFG00845006126	ENSCAFG00845006143	SHD (ENSCAFG00845006173) #16	YJU2 (ENSCAFG00845006213) #17	EBI3 (ENSCAFG00845006245) #18	ANKRD24 (ENSCAFG00845006318) #19	SIRT6 (ENSCAFG00845006500) #20	CREB3L3 (ENSCAFG00845006598) #21	MAP2K2 (ENSCAFG00845006651) #22	ZBTB7A (ENSCAFG00845006749) #23	PIAS4 (ENSCAFG00845006856) #24	EEF2 (ENSCAFG00845007003) #25	DAPK3 (ENSCAFG00845007165) #26	ATCAY (ENSCAFG00845007239) #28	ENSCAFG00845007313	ZFR2 (ENSCAFG00845007434) #29	MATK (ENSCAFG00845007724) #30	RAX2 (ENSCAFG00845008002) #31	MRPL54 (ENSCAFG00845008032) #32	APBA3 (ENSCAFG00845008066) #33	TJP3 (ENSCAFG00845008169) #34	PIP5K1C (ENSCAFG00845008444) #35	CACTIN (ENSCAFG00845008863) #36	TBXA2R (ENSCAFG00845008905) #37
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148.w #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00390000003420.b
Ferret	MODERN SPECIES	326	ENSMPUG00000005096 ##7	HDGFL2 (ENSMPUG00000005082) #8	UBXN6 (ENSMPUG00000005027) #9	CHAF1A (ENSMPUG00000005021) #10	SH3GL1 (ENSMPUG00000005005) #11	MPND (ENSMPUG00000004955) #12	STAP2 (ENSMPUG00000004944) #13	FSD1 (ENSMPUG00000004929) #14	ENSMPUG00000004926 #15	SHD (ENSMPUG00000004914) #16	YJU2 (ENSMPUG00000004906) #17	EBI3 (ENSMPUG00000004891) #18	ANKRD24 (ENSMPUG00000004751) #19	SIRT6 (ENSMPUG00000004740) #20	CREB3L3 (ENSMPUG00000004723) #21	MAP2K2 (ENSMPUG00000004715) #22	ZBTB7A (ENSMPUG00000004703) #23	PIAS4 (ENSMPUG00000004495) #24	EEF2 (ENSMPUG00000004478) #25	DAPK3 (ENSMPUG00000004467) #26	ATCAY (ENSMPUG00000004453) #28	ENSMPUG00000004305 #29	MATK (ENSMPUG00000004170) #30	MRPL54 (ENSMPUG00000004155) #32	APBA3 (ENSMPUG00000004145) #33	TJP3 (ENSMPUG00000004062) #34	PIP5K1C (ENSMPUG00000004050) #35	CACTIN (ENSMPUG00000004036) #36	TBXA2R (ENSMPUG00000004032) #37	GIPC3 (ENSMPUG00000003985)	HMG20B (ENSMPUG00000003925)
American mink	MODERN SPECIES	175	A2GL (ENSNVIG00000008012)	PLIN5 (ENSNVIG00000007989) ##7	HDGFL2 (ENSNVIG00000007923) #8	UBXN6 (ENSNVIG00000007893) #9	CHAF1A (ENSNVIG00000007855) #10	SH3GL1 (ENSNVIG00000007791) #11	MPND (ENSNVIG00000007709) #12	STAP2 (ENSNVIG00000007652) #13	FSD1 (ENSNVIG00000007558) #14	SHD (ENSNVIG00000007523) #16	YJU2 (ENSNVIG00000007508) #17	EBI3 (ENSNVIG00000007465) #18	ANKRD24 (ENSNVIG00000007410) #19	SIRT6 (ENSNVIG00000007366) #20	CREB3L3 (ENSNVIG00000007350) #21	MAP2K2 (ENSNVIG00000007322) #22	ZBTB7A (ENSNVIG00000007312) #23	PIAS4 (ENSNVIG00000007291) #24	EEF2 (ENSNVIG00000007264) #25	DAPK3 (ENSNVIG00000007242) #26	ATCAY (ENSNVIG00000007200) #28	ZFR2 (ENSNVIG00000007143) #29	MATK (ENSNVIG00000006982) #30	RAX2 (ENSNVIG00000006966) #31	MRPL54 (ENSNVIG00000006941) #32	APBA3 (ENSNVIG00000006915) #33	TJP3 (ENSNVIG00000006858) #34	PIP5K1C (ENSNVIG00000006640) #35	CACTIN (ENSNVIG00000006539) #36	TBXA2R (ENSNVIG00000006523) #37	GIPC3 (ENSNVIG00000006504)
Ursidae	ANCESTRAL SPECIES	20	ENSGT00950000182920.b.a.a.c.a.b.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37	ENSGT00730000111899
Giant Panda	MODERN SPECIES	14	PLIN5 (ENSAMEG00000001928) ##7	PLIN4 (ENSAMEG00000001943) #7	HDGFL2 (ENSAMEG00000001946) #8	UBXN6 (ENSAMEG00000001974) #9	CHAF1A (ENSAMEG00000002002) #10	SH3GL1 (ENSAMEG00000002020) #11	MPND (ENSAMEG00000002047) #12	FSD1 (ENSAMEG00000002072) #14	TMIGD2 (ENSAMEG00000002105) #15	SHD (ENSAMEG00000002106) #16	YJU2 (ENSAMEG00000002124) #17	ENSAMEG00000028708 #18	ANKRD24 (ENSAMEG00000002152) #19	SIRT6 (ENSAMEG00000002180) #20	CREB3L3 (ENSAMEG00000002199) #21	MAP2K2 (ENSAMEG00000002212) #22	ZBTB7A (ENSAMEG00000026266) #23	PIAS4 (ENSAMEG00000002251) #24	EEF2 (ENSAMEG00000002286) #25	DAPK3 (ENSAMEG00000006056) #26	ATCAY (ENSAMEG00000006007) #28	ZFR2 (ENSAMEG00000005974) #29	MATK (ENSAMEG00000005916) #30	RAX2 (ENSAMEG00000005914) #31	MRPL54 (ENSAMEG00000028994) #32	APBA3 (ENSAMEG00000005876) #33	TJP3 (ENSAMEG00000005786) #34	PIP5K1C (ENSAMEG00000005756) #35	CACTIN (ENSAMEG00000005743) #36	TBXA2R (ENSAMEG00000005733) #37	ENSAMEG00000028252
Ursus	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000158364 #28	ENSGT00940000167684	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
American black bear	MODERN SPECIES	1206																MAP2K2 (ENSUAMG00000022381) #22	ZBTB7A (ENSUAMG00000022382) #23	PIAS4 (ENSUAMG00000022383) #24	EEF2 (ENSUAMG00000022409) #25	DAPK3 (ENSUAMG00000023932) #26	ATCAY (ENSUAMG00000023933) #28	ENSUAMG00000023935
Polar bear	MODERN SPECIES	455	HDGFL2 (ENSUMAG00000007753) #8	UBXN6 (ENSUMAG00000007739) #9	CHAF1A (ENSUMAG00000007691) #10	SH3GL1 (ENSUMAG00000007676) #11	MPND (ENSUMAG00000007663) #12	STAP2 (ENSUMAG00000007652) #13	FSD1 (ENSUMAG00000007632) #14	ENSUMAG00000007621 #15	SHD (ENSUMAG00000007615) #16	ENSUMAG00000007611	YJU2 (ENSUMAG00000007607) #17	ENSUMAG00000007603 #18	ENSUMAG00000007602 #19	SIRT6 (ENSUMAG00000007575) #20	CREB3L3 (ENSUMAG00000007566) #21	ENSUMAG00000007513 #22	PIAS4 (ENSUMAG00000007484) #24	EEF2 (ENSUMAG00000007474) #25	ENSUMAG00000007459	ATCAY (ENSUMAG00000007452) #28	ENSUMAG00000007447	ENSUMAG00000007440 #29	MATK (ENSUMAG00000007427) #30	ENSUMAG00000007421	MRPL54 (ENSUMAG00000007416) #32	PIP5K1C (ENSUMAG00000007390) #35	ENSUMAG00000007385 #36	ENSUMAG00000007383	ENSUMAG00000007381	MFSD12 (ENSUMAG00000007358)	TEKTIP1 (ENSUMAG00000007354)
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00960000192381	ENSGT00940000159004 #16	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Greater horseshoe bat	MODERN SPECIES	9	PLIN4 (ENSRFEG00010018695) #7	HDGFL2 (ENSRFEG00010018715) #8	ENSRFEG00010018772	UBXN6 (ENSRFEG00010018790) #9	CHAF1A (ENSRFEG00010018850) #10	SH3GL1 (ENSRFEG00010018888) #11	MPND (ENSRFEG00010018966) #12	STAP2 (ENSRFEG00010019155) #13	FSD1 (ENSRFEG00010019207) #14	ENSRFEG00010019258	SHD (ENSRFEG00010019283) #16	EBI3 (ENSRFEG00010019381) #18	ANKRD24 (ENSRFEG00010019433) #19	SIRT6 (ENSRFEG00010019622) #20	CREB3L3 (ENSRFEG00010019660) #21	MAP2K2 (ENSRFEG00010019724) #22	ENSRFEG00010019770	ZBTB7A (ENSRFEG00010019791) #23	PIAS4 (ENSRFEG00010019828) #24	EEF2 (ENSRFEG00010019895) #25	DAPK3 (ENSRFEG00010020027) #26	NMRK2 (ENSRFEG00010020068) #27	ATCAY (ENSRFEG00010020101) #28	ZFR2 (ENSRFEG00010020171) #29	MATK (ENSRFEG00010020199) #30	RAX2 (ENSRFEG00010020350) #31	MRPL54 (ENSRFEG00010020373) #32	APBA3 (ENSRFEG00010020395) #33	TJP3 (ENSRFEG00010020437) #34	PIP5K1C (ENSRFEG00010020492) #35	CACTIN (ENSRFEG00010020557) #36
Microbat	MODERN SPECIES	1657												EBI3 (ENSMLUG00000008782) #18	ANKRD24 (ENSMLUG00000008742) #19	SIRT6 (ENSMLUG00000008726) #20	CREB3L3 (ENSMLUG00000008703) #21	MAP2K2 (ENSMLUG00000008679) #22	ZBTB7A (ENSMLUG00000008667) #23	PIAS4 (ENSMLUG00000008650) #24	ENSMLUG00000014241 #25	DAPK3 (ENSMLUG00000006239) #26	NMRK2 (ENSMLUG00000016715) #27	ATCAY (ENSMLUG00000003760) #28
Megabat	MODERN SPECIES	387																MAP2K2 (ENSPVAG00000002678) #22
Equus	ANCESTRAL SPECIES	34	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Horse	MODERN SPECIES	28	PLIN4 (ENSECAG00000035223) #7	HDGFL2 (ENSECAG00000028686) #8	UBXN6 (ENSECAG00000021994) #9	CHAF1A (ENSECAG00000014377) #10	SH3GL1 (ENSECAG00000024773) #11	MPND (ENSECAG00000029898) #12	STAP2 (ENSECAG00000030351) #13	FSD1 (ENSECAG00000046915) #14	TMIGD2 (ENSECAG00000011606) #15	SHD (ENSECAG00000005602) #16	YJU2 (ENSECAG00000022785) #17	EBI3 (ENSECAG00000018667) #18	ANKRD24 (ENSECAG00000016048) #19	SIRT6 (ENSECAG00000015304) #20	CREB3L3 (ENSECAG00000015101) #21	MAP2K2 (ENSECAG00000009157) #22	ZBTB7A (ENSECAG00000040226) #23	PIAS4 (ENSECAG00000018697) #24	EEF2 (ENSECAG00000020547) #25	DAPK3 (ENSECAG00000012570) #26	NMRK2 (ENSECAG00000022841) #27	ATCAY (ENSECAG00000015094) #28	ZFR2 (ENSECAG00000007090) #29	MATK (ENSECAG00000057591) #30	RAX2 (ENSECAG00000027953) #31	TJP3 (ENSECAG00000011885) #34	APBA3 (ENSECAG00000021308) #33	PIP5K1C (ENSECAG00000033728) #35	CACTIN (ENSECAG00000039454) #36	ENSECAG00000051988	TBXA2R (ENSECAG00000038039) #37
Donkey	MODERN SPECIES	12	ENSEASG00005024727 #7	HDGFL2 (ENSEASG00005022459) #8	UBXN6 (ENSEASG00005022450) #9	CHAF1A (ENSEASG00005022431) #10	SH3GL1 (ENSEASG00005022411) #11	MPND (ENSEASG00005022406) #12	STAP2 (ENSEASG00005024518) #13	FSD1 (ENSEASG00005022397) #14	ENSEASG00005025910	SHD (ENSEASG00005022388) #16	YJU2 (ENSEASG00005022383) #17	EBI3 (ENSEASG00005022379) #18	ANKRD24 (ENSEASG00005038678) #19	SIRT6 (ENSEASG00005022360) #20	CREB3L3 (ENSEASG00005022352) #21	ENSEASG00005025779 #22	ZBTB7A (ENSEASG00005032317) #23	PIAS4 (ENSEASG00005022327) #24	EEF2 (ENSEASG00005022311) #25	DAPK3 (ENSEASG00005022305) #26	NMRK2 (ENSEASG00005031157) #27	ATCAY (ENSEASG00005028112) #28	ZFR2 (ENSEASG00005022296) #29	MATK (ENSEASG00005022288) #30	RAX2 (ENSEASG00005026320) #31	MRPL54 (ENSEASG00005022283) #32	APBA3 (ENSEASG00005022276) #33	TJP3 (ENSEASG00005022268) #34	PIP5K1C (ENSEASG00005022261) #35	CACTIN (ENSEASG00005030573) #36	TBXA2R (ENSEASG00005022250) #37
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Suina	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Pig	MODERN SPECIES	10	PLIN4 (ENSSSCG00000013512) #7	HDGFL2 (ENSSSCG00000013511) #8	UBXN6 (ENSSSCG00000013510) #9	CHAF1A (ENSSSCG00000013509) #10	SH3GL1 (ENSSSCG00000013508) #11	MPND (ENSSSCG00000013507) #12	STAP2 (ENSSSCG00000013506) #13	FSD1 (ENSSSCG00000013505) #14	TMIGD2 (ENSSSCG00000052810) #15	SHD (ENSSSCG00000013503) #16	YJU2 (ENSSSCG00000013499) #17	EBI3 (ENSSSCG00000013498) #18	ANKRD24 (ENSSSCG00000013497) #19	SIRT6 (ENSSSCG00000013496) #20	CREB3L3 (ENSSSCG00000013501) #21	MAP2K2 (ENSSSCG00000027127) #22	ZBTB7A (ENSSSCG00000029236) #23	PIAS4 (ENSSSCG00000022066) #24	ENSSSCG00000050591	EEF2 (ENSSSCG00000025675) #25	DAPK3 (ENSSSCG00000032170) #26	NMRK2 (ENSSSCG00000040860) #27	ATCAY (ENSSSCG00000026754) #28	ZFR2 (ENSSSCG00000013495) #29	MATK (ENSSSCG00000013494) #30	RAX2 (ENSSSCG00000032429) #31	MRPL54 (ENSSSCG00000024242) #32	APBA3 (ENSSSCG00000013492) #33	TJP3 (ENSSSCG00000013491) #34	PIP5K1C (ENSSSCG00000013490) #35	ENSSSCG00000050486
Chacoan peccary	MODERN SPECIES	770	HDGFL2 (ENSCWAG00000014443) #8	UBXN6 (ENSCWAG00000014385) #9	ENSCWAG00000014343	CHAF1A (ENSCWAG00000014211) #10	SH3GL1 (ENSCWAG00000014104) #11	MPND (ENSCWAG00000014062) #12	STAP2 (ENSCWAG00000013947) #13	FSD1 (ENSCWAG00000013697) #14	ENSCWAG00000013636	SHD (ENSCWAG00000013499) #16	YJU2 (ENSCWAG00000013462) #17	EBI3 (ENSCWAG00000013400) #18	ANKRD24 (ENSCWAG00000013213) #19	SIRT6 (ENSCWAG00000013156) #20	CREB3L3 (ENSCWAG00000012936) #21	MAP2K2 (ENSCWAG00000012847) #22	ZBTB7A (ENSCWAG00000012798) #23	PIAS4 (ENSCWAG00000012745) #24	EEF2 (ENSCWAG00000012682) #25	DAPK3 (ENSCWAG00000012640) #26	ENSCWAG00000012584 #27	ATCAY (ENSCWAG00000012401) #28	ZFR2 (ENSCWAG00000012053) #29	MATK (ENSCWAG00000011572) #30	RAX2 (ENSCWAG00000011537) #31	MRPL54 (ENSCWAG00000011519) #32	APBA3 (ENSCWAG00000011492) #33	TJP3 (ENSCWAG00000011084) #34	PIP5K1C (ENSCWAG00000011001) #35	CACTIN (ENSCWAG00000010950) #36	TBXA2R (ENSCWAG00000010917) #37
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Camelidae	ANCESTRAL SPECIES	36	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00960000192381	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Arabian camel	MODERN SPECIES	14	PLIN5 (ENSCDRG00005003696) ##7	HDGFL2 (ENSCDRG00005003845) #8	UBXN6 (ENSCDRG00005003901) #9	CHAF1A (ENSCDRG00005003943) #10	SH3GL1 (ENSCDRG00005004008) #11	MPND (ENSCDRG00005004145) #12	STAP2 (ENSCDRG00005004207) #13	FSD1 (ENSCDRG00005004266) #14	ENSCDRG00005004340	SHD (ENSCDRG00005004404) #16	YJU2 (ENSCDRG00005004442) #17	EBI3 (ENSCDRG00005004472) #18	ANKRD24 (ENSCDRG00005004507) #19	ENSCDRG00005004643 #20	CREB3L3 (ENSCDRG00005004679) #21	MAP2K2 (ENSCDRG00005004746) #22	ZBTB7A (ENSCDRG00005004798) #23	PIAS4 (ENSCDRG00005004818) #24	EEF2 (ENSCDRG00005004859) #25	DAPK3 (ENSCDRG00005004913) #26	NMRK2 (ENSCDRG00005004939) #27	ATCAY (ENSCDRG00005005006) #28	ZFR2 (ENSCDRG00005005063) #29	MATK (ENSCDRG00005005153) #30	RAX2 (ENSCDRG00005005226) #31	MRPL54 (ENSCDRG00005005240) #32	APBA3 (ENSCDRG00005005256) #33	TJP3 (ENSCDRG00005005310) #34	PIP5K1C (ENSCDRG00005005583) #35	CACTIN (ENSCDRG00005005904) #36	TBXA2R (ENSCDRG00005005933) #37
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Cetacea	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00940000163425	ENSGT00940000162830.a.a.a	ENSGT00940000162830.a.b.a	ENSGT00940000162830.a.b.b	ENSGT01030000234519.e.a.a.b.a.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m
Narwhal	MODERN SPECIES	298	PLIN5 (ENSMMNG00015003463) ##7	PLIN4 (ENSMMNG00015003425) #7	HDGFL2 (ENSMMNG00015003357) #8	UBXN6 (ENSMMNG00015003306) #9	CHAF1A (ENSMMNG00015003273) #10	SH3GL1 (ENSMMNG00015003205) #11	MPND (ENSMMNG00015003120) #12	STAP2 (ENSMMNG00015003049) #13	FSD1 (ENSMMNG00015002986) #14	SHD (ENSMMNG00015002893) #16	YJU2 (ENSMMNG00015002868) #17	EBI3 (ENSMMNG00015002848) #18	ANKRD24 (ENSMMNG00015002746) #19	SIRT6 (ENSMMNG00015002692) #20	CREB3L3 (ENSMMNG00015002644) #21	MAP2K2 (ENSMMNG00015002569) #22	ZBTB7A (ENSMMNG00015002508) #23	PIAS4 (ENSMMNG00015002478) #24	EEF2 (ENSMMNG00015002426) #25	DAPK3 (ENSMMNG00015002394) #26	ENSMMNG00015002371 #27	ATCAY (ENSMMNG00015002321) #28	ZFR2 (ENSMMNG00015002202) #29	MATK (ENSMMNG00015002087) #30	RAX2 (ENSMMNG00015002052) #31	ZNF555 (ENSMMNG00015002028)	ENSMMNG00015002004	ENSMMNG00015001988	ENSMMNG00015001966	ENSMMNG00015001925	TLE2 (ENSMMNG00015001829)
Beluga whale	MODERN SPECIES	62	PLIN5 (ENSDLEG00000020074) ##7	PLIN4 (ENSDLEG00000020078) #7	HDGFL2 (ENSDLEG00000020084) #8	UBXN6 (ENSDLEG00000020093) #9	CHAF1A (ENSDLEG00000020099) #10	SH3GL1 (ENSDLEG00000020106) #11	MPND (ENSDLEG00000020118) #12	STAP2 (ENSDLEG00000020176) #13	FSD1 (ENSDLEG00000020184) #14	SHD (ENSDLEG00000020188) #16	YJU2 (ENSDLEG00000020194) #17	EBI3 (ENSDLEG00000020198) #18	ANKRD24 (ENSDLEG00000020203) #19	SIRT6 (ENSDLEG00000020222) #20	CREB3L3 (ENSDLEG00000020225) #21	MAP2K2 (ENSDLEG00000020230) #22	ZBTB7A (ENSDLEG00000020233) #23	PIAS4 (ENSDLEG00000020241) #24	EEF2 (ENSDLEG00000020260) #25	DAPK3 (ENSDLEG00000020266) #26	NMRK2 (ENSDLEG00000020268) #27	ATCAY (ENSDLEG00000020274) #28	ZFR2 (ENSDLEG00000020297) #29	MATK (ENSDLEG00000020319) #30	RAX2 (ENSDLEG00000020322) #31	ZNF555 (ENSDLEG00000020325)	ENSDLEG00000020329	ENSDLEG00000020333	ENSDLEG00000020335	ENSDLEG00000020339	ENSDLEG00000020344
Vaquita	MODERN SPECIES	14	PLIN4 (ENSPSNG00000015258) #7	HDGFL2 (ENSPSNG00000015186) #8	UBXN6 (ENSPSNG00000015109) #9	CHAF1A (ENSPSNG00000015062) #10	SH3GL1 (ENSPSNG00000014938) #11	MPND (ENSPSNG00000014379) #12	STAP2 (ENSPSNG00000014302) #13	FSD1 (ENSPSNG00000014190) #14	TMIGD2 (ENSPSNG00000014081) #15	SHD (ENSPSNG00000013903) #16	YJU2 (ENSPSNG00000013829) #17	EBI3 (ENSPSNG00000013792) #18	ANKRD24 (ENSPSNG00000013426) #19	SIRT6 (ENSPSNG00000013319) #20	CREB3L3 (ENSPSNG00000013239) #21	MAP2K2 (ENSPSNG00000013148) #22	ZBTB7A (ENSPSNG00000013107) #23	PIAS4 (ENSPSNG00000013054) #24	EEF2 (ENSPSNG00000012974) #25	DAPK3 (ENSPSNG00000012917) #26	ENSPSNG00000012851 #27	ATCAY (ENSPSNG00000012627) #28	ZFR2 (ENSPSNG00000012279) #29	MATK (ENSPSNG00000011874) #30	RAX2 (ENSPSNG00000011818) #31	ZNF555 (ENSPSNG00000011767)	ENSPSNG00000011752	ENSPSNG00000011739	ENSPSNG00000011716	ENSPSNG00000011693	TLE6 (ENSPSNG00000011672)
Dolphin	MODERN SPECIES	1999																MAP2K2 (ENSTTRG00000006781) #22	ZBTB7A (ENSTTRG00000006780) #23	PIAS4 (ENSTTRG00000006779) #24	EEF2 (ENSTTRG00000006776) #25	DAPK3 (ENSTTRG00000006774) #26	NMRK2 (ENSTTRG00000006772) #27	ATCAY (ENSTTRG00000006771) #28	ZFR2 (ENSTTRG00000006762) #29	MATK (ENSTTRG00000006758) #30	RAX2 (ENSTTRG00000006753) #31
Sperm whale	MODERN SPECIES	245																MAP2K2 (ENSPCTG00005022340) #22	ZBTB7A (ENSPCTG00005022348) #23
Blue whale	MODERN SPECIES	14	PLIN4 (ENSBMSG00010003769) #7	HDGFL2 (ENSBMSG00010003814) #8	UBXN6 (ENSBMSG00010003834) #9	CHAF1A (ENSBMSG00010003859) #10	SH3GL1 (ENSBMSG00010003891) #11	MPND (ENSBMSG00010003950) #12	STAP2 (ENSBMSG00010004012) #13	FSD1 (ENSBMSG00010004028) #14	TMIGD2 (ENSBMSG00010004047) #15	SHD (ENSBMSG00010004056) #16	YJU2 (ENSBMSG00010004085) #17	EBI3 (ENSBMSG00010004101) #18	ANKRD24 (ENSBMSG00010004125) #19	SIRT6 (ENSBMSG00010004161) #20	CREB3L3 (ENSBMSG00010004181) #21	MAP2K2 (ENSBMSG00010004206) #22	PIAS4 (ENSBMSG00010004230) #24	EEF2 (ENSBMSG00010006690) #25	ENSBMSG00010006760 #27	ATCAY (ENSBMSG00010006778) #28	ZFR2 (ENSBMSG00010006830) #29	ZNF555 (ENSBMSG00010007047)	ENSBMSG00010007074	ENSBMSG00010007090	ENSBMSG00010007121	ENSBMSG00010007140	ENSBMSG00010007156	ENSBMSG00010007176	TLE2 (ENSBMSG00010007244)	TLE5 (ENSBMSG00010007577)	GNA11 (ENSBMSG00010007614)
Pecora	ANCESTRAL SPECIES		ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Percora_a	ANCESTRAL SPECIES		ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT00520000060565
Bovidae	ANCESTRAL SPECIES		ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00960000192381	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Rambouillet Sheep	MODERN SPECIES	21	PLIN4 (ENSOARG00020014173) #7	HDGFL2 (ENSOARG00020014218) #8	UBXN6 (ENSOARG00020014307) #9	CHAF1A (ENSOARG00020014361) #10	SH3GL1 (ENSOARG00020014536) #11	MPND (ENSOARG00020014684) #12	STAP2 (ENSOARG00020015409) #13	FSD1 (ENSOARG00020015484) #14	ENSOARG00020015717	SHD (ENSOARG00020015785) #16	YJU2 (ENSOARG00020015953) #17	EBI3 (ENSOARG00020016010) #18	ANKRD24 (ENSOARG00020016056) #19	SIRT6 (ENSOARG00020016205) #20	CREB3L3 (ENSOARG00020016282) #21	MAP2K2 (ENSOARG00020016331) #22	ZBTB7A (ENSOARG00020016414) #23	PIAS4 (ENSOARG00020016478) #24	EEF2 (ENSOARG00020016508) #25	DAPK3 (ENSOARG00020016591) #26	ENSOARG00020016636 #27	ATCAY (ENSOARG00020016696) #28	ZFR2 (ENSOARG00020016870) #29	MATK (ENSOARG00020017085) #30	RAX2 (ENSOARG00020017140) #31	MRPL54 (ENSOARG00020017174) #32	APBA3 (ENSOARG00020017206) #33	TJP3 (ENSOARG00020017288) #34	PIP5K1C (ENSOARG00020017829) #35	CACTIN (ENSOARG00020018654) #36	TBXA2R (ENSOARG00020018783) #37
Goat	MODERN SPECIES	26	PLIN5 (ENSCHIG00000020436) ##7	ENSCHIG00000010326 #7	HDGFL2 (ENSCHIG00000019288) #8	UBXN6 (ENSCHIG00000004865) #9	CHAF1A (ENSCHIG00000013105) #10	SH3GL1 (ENSCHIG00000027242) #11	MPND (ENSCHIG00000015132) #12	STAP2 (ENSCHIG00000010686) #13	FSD1 (ENSCHIG00000020728) #14	SHD (ENSCHIG00000016892) #16	ENSCHIG00000016966 #17	EBI3 (ENSCHIG00000026597) #18	ANKRD24 (ENSCHIG00000022948) #19	SIRT6 (ENSCHIG00000025871) #20	CREB3L3 (ENSCHIG00000026228) #21	MAP2K2 (ENSCHIG00000014919) #22	ZBTB7A (ENSCHIG00000022661) #23	PIAS4 (ENSCHIG00000015352) #24	ENSCHIG00000013910 #25	DAPK3 (ENSCHIG00000018026) #26	NMRK2 (ENSCHIG00000008917) #27	ATCAY (ENSCHIG00000026683) #28	ZFR2 (ENSCHIG00000024368) #29	MATK (ENSCHIG00000014576) #30	RAX2 (ENSCHIG00000020868) #31	MRPL54 (ENSCHIG00000026538) #32	APBA3 (ENSCHIG00000014574) #33	TJP3 (ENSCHIG00000017841) #34	PIP5K1C (ENSCHIG00000022491) #35	CACTIN (ENSCHIG00000026750) #36	TBXA2R (ENSCHIG00000012747) #37
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36
Bos	ANCESTRAL SPECIES	3	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36
Cow	MODERN SPECIES	26	UBXN6 (ENSBTAG00000008186) #9	CHAF1A (ENSBTAG00000008181) #10	SH3GL1 (ENSBTAG00000006007) #11	MPND (ENSBTAG00000006005) #12	STAP2 (ENSBTAG00000006001) #13	ENSBTAG00000054165	FSD1 (ENSBTAG00000005999) #14	TMIGD2 (ENSBTAG00000004936) #15	SHD (ENSBTAG00000039696) #16	YJU2 (ENSBTAG00000012830) #17	EBI3 (ENSBTAG00000012829) #18	ENSBTAG00000054046 #19	ENSBTAG00000052694	SIRT6 (ENSBTAG00000019909) #20	CREB3L3 (ENSBTAG00000010215) #21	MAP2K2 (ENSBTAG00000024450) #22	ZBTB7A (ENSBTAG00000020117) #23	PIAS4 (ENSBTAG00000000753) #24	ENSBTAG00000045914	EEF2 (ENSBTAG00000004258) #25	DAPK3 (ENSBTAG00000020417) #26	NMRK2 (ENSBTAG00000031573) #27	ATCAY (ENSBTAG00000018375) #28	ZFR2 (ENSBTAG00000000755) #29	MATK (ENSBTAG00000006619) #30	RAX2 (ENSBTAG00000009750) #31	MRPL54 (ENSBTAG00000008396) #32	APBA3 (ENSBTAG00000008395) #33	TJP3 (ENSBTAG00000018342) #34	PIP5K1C (ENSBTAG00000000710) #35	CACTIN (ENSBTAG00000010373) #36
Hybrid Bos Indicus	MODERN SPECIES	26	UBXN6 (ENSBIXG00005013594) #9	CHAF1A (ENSBIXG00005001662) #10	SH3GL1 (ENSBIXG00005013675) #11	MPND (ENSBIXG00005013751) #12	ENSBIXG00005013788	STAP2 (ENSBIXG00005013835) #13	FSD1 (ENSBIXG00005013884) #14	ENSBIXG00005013897 #15	SHD (ENSBIXG00005013953) #16	YJU2 (ENSBIXG00005013975) #17	EBI3 (ENSBIXG00005007490) #18	ENSBIXG00005014008	ANKRD24 (ENSBIXG00005014095) #19	SIRT6 (ENSBIXG00005014147) #20	CREB3L3 (ENSBIXG00005014171) #21	MAP2K2 (ENSBIXG00005014227) #22	ZBTB7A (ENSBIXG00005007496) #23	PIAS4 (ENSBIXG00005014272) #24	ENSBIXG00005001922 #25	NMRK2 (ENSBIXG00005014431) #27	ATCAY (ENSBIXG00005006129) #28	ZFR2 (ENSBIXG00005007010) #29	MATK (ENSBIXG00005014627) #30	RAX2 (ENSBIXG00005014658) #31	MRPL54 (ENSBIXG00005014674) #32	APBA3 (ENSBIXG00005005496) #33	TJP3 (ENSBIXG00005002143) #34	PIP5K1C (ENSBIXG00005014985) #35	CACTIN (ENSBIXG00005002202) #36	TBXA2R (ENSBIXG00005015046) #37	GIPC3 (ENSBIXG00005002213)
Bos_a	ANCESTRAL SPECIES	2	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT01100000263504.a.b.a.b.a.b.ib	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36
Domestic yak	MODERN SPECIES	27	PLIN4 (ENSBGRG00000014527) #7	HDGFL2 (ENSBGRG00000014602) #8	UBXN6 (ENSBGRG00000014883) #9	CHAF1A (ENSBGRG00000015141) #10	SH3GL1 (ENSBGRG00000015300) #11	MPND (ENSBGRG00000015810) #12	STAP2 (ENSBGRG00000016477) #13	FSD1 (ENSBGRG00000016795) #14	ENSBGRG00000017038 #15	SHD (ENSBGRG00000017098) #16	ENSBGRG00000017328 #16	EBI3 (ENSBGRG00000017377) #18	ANKRD24 (ENSBGRG00000017470) #19	SIRT6 (ENSBGRG00000017784) #20	CREB3L3 (ENSBGRG00000017902) #21	MAP2K2 (ENSBGRG00000018429) #22	ZBTB7A (ENSBGRG00000018478) #23	PIAS4 (ENSBGRG00000018519) #24	ENSBGRG00000018795	EEF2 (ENSBGRG00000018816) #25	DAPK3 (ENSBGRG00000019101) #26	NMRK2 (ENSBGRG00000019172) #27	ATCAY (ENSBGRG00000019249) #28	ZFR2 (ENSBGRG00000019327) #29	MATK (ENSBGRG00000019523) #30	RAX2 (ENSBGRG00000019785) #31	MRPL54 (ENSBGRG00000019811) #32	APBA3 (ENSBGRG00000019857) #33	TJP3 (ENSBGRG00000019950) #34	PIP5K1C (ENSBGRG00000020521) #35	CACTIN (ENSBGRG00000020942) #36
Wild yak	MODERN SPECIES	763	PLIN4 (ENSBMUG00000019070) #7	HDGFL2 (ENSBMUG00000019044) #8	UBXN6 (ENSBMUG00000019018) #9	CHAF1A (ENSBMUG00000018995) #10	SH3GL1 (ENSBMUG00000018967) #11	MPND (ENSBMUG00000018908) #12	STAP2 (ENSBMUG00000018840) #13	FSD1 (ENSBMUG00000018781) #14	TMIGD2 (ENSBMUG00000018751) #15	SHD (ENSBMUG00000018741) #16	YJU2 (ENSBMUG00000018705) #17	EBI3 (ENSBMUG00000018691) #18	ANKRD24 (ENSBMUG00000018653) #19	SIRT6 (ENSBMUG00000018589) #20	CREB3L3 (ENSBMUG00000018566) #21	MAP2K2 (ENSBMUG00000018543) #22	ZBTB7A (ENSBMUG00000018531) #23	PIAS4 (ENSBMUG00000018518) #24	ENSBMUG00000018505 #25	DAPK3 (ENSBMUG00000018482) #26	NMRK2 (ENSBMUG00000018462) #27	ATCAY (ENSBMUG00000018411) #28	ZFR2 (ENSBMUG00000018402) #29	MATK (ENSBMUG00000018375) #30	RAX2 (ENSBMUG00000018362) #31	MRPL54 (ENSBMUG00000018345) #32	APBA3 (ENSBMUG00000018325) #33	TJP3 (ENSBMUG00000018288) #34	PIP5K1C (ENSBMUG00000018181) #35	CACTIN (ENSBMUG00000018104) #36	TBXA2R (ENSBMUG00000018072) #37
American bison	MODERN SPECIES	3349	PLIN5 (ENSBBBG00000022303) ##7	HDGFL2 (ENSBBBG00000022373) #8	UBXN6 (ENSBBBG00000022409) #9	CHAF1A (ENSBBBG00000022444) #10	SH3GL1 (ENSBBBG00000022500) #11	MPND (ENSBBBG00000022616) #12	STAP2 (ENSBBBG00000008960) #13	FSD1 (ENSBBBG00000022701) #14	TMIGD2 (ENSBBBG00000022717) #15	SHD (ENSBBBG00000022746) #16	YJU2 (ENSBBBG00000022764) #17	EBI3 (ENSBBBG00000022773) #18	ENSBBBG00000008311 #19	SIRT6 (ENSBBBG00000022808) #20	CREB3L3 (ENSBBBG00000022831) #21	MAP2K2 (ENSBBBG00000022851) #22	ZBTB7A (ENSBBBG00000022852) #23	PIAS4 (ENSBBBG00000022869) #24	ENSBBBG00000022877	EEF2 (ENSBBBG00000022915) #25	DAPK3 (ENSBBBG00000022951) #26	ENSBBBG00000006028 #27	ATCAY (ENSBBBG00000022991) #28	ENSBBBG00000023003 #29	MATK (ENSBBBG00000023026) #30	RAX2 (ENSBBBG00000008182) #31	MRPL54 (ENSBBBG00000023057) #32	APBA3 (ENSBBBG00000006868) #33	TJP3 (ENSBBBG00000023169) #34	PIP5K1C (ENSBBBG00000000451) #35	CACTIN (ENSBBBG00000000388) #36
Siberian musk deer	MODERN SPECIES	99	ENSMMSG00000022530 #7	HDGFL2 (ENSMMSG00000022535) #8	ENSMMSG00000022557 #9	CHAF1A (ENSMMSG00000022582) #10	SH3GL1 (ENSMMSG00000022602) #11	MPND (ENSMMSG00000022624) #12	STAP2 (ENSMMSG00000022651) #13	FSD1 (ENSMMSG00000022670) #14	ENSMMSG00000022677	SHD (ENSMMSG00000022694) #16	YJU2 (ENSMMSG00000022712) #17	EBI3 (ENSMMSG00000022725) #18	ANKRD24 (ENSMMSG00000022747) #19	SIRT6 (ENSMMSG00000022789) #20	CREB3L3 (ENSMMSG00000022814) #21	MAP2K2 (ENSMMSG00000022835) #22	ZBTB7A (ENSMMSG00000022860) #23	PIAS4 (ENSMMSG00000022871) #24	EEF2 (ENSMMSG00000022885) #25	DAPK3 (ENSMMSG00000022904) #26	NMRK2 (ENSMMSG00000022912) #27	ATCAY (ENSMMSG00000022923) #28	ZFR2 (ENSMMSG00000022940) #29	MATK (ENSMMSG00000022958) #30	RAX2 (ENSMMSG00000022983) #31	MRPL54 (ENSMMSG00000022990) #32	APBA3 (ENSMMSG00000023004) #33	TJP3 (ENSMMSG00000023025) #34	PIP5K1C (ENSMMSG00000023101) #35	CACTIN (ENSMMSG00000023129) #36	ENSMMSG00000023139
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000006294	CUTC (ENSCHYG00000006242)	COX15 (ENSCHYG00000006179)	ENTPD7 (ENSCHYG00000006056)	SLC25A28 (ENSCHYG00000006008)	NKX2-3 (ENSCHYG00000005991)	ENSCHYG00000005946	CNNM1 (ENSCHYG00000005721)	HPSE2 (ENSCHYG00000005569)	HPS1 (ENSCHYG00000005361)	PYROXD2 (ENSCHYG00000005123)	ENSCHYG00000005075	LOXL4 (ENSCHYG00000005041)	R3HCC1L (ENSCHYG00000004994)	CRTAC1 (ENSCHYG00000004903)	ENSCHYG00000004880 #22	SFRP5 (ENSCHYG00000004868)	ZFYVE27 (ENSCHYG00000004712)	MARVELD1 (ENSCHYG00000004459)	AVPI1 (ENSCHYG00000004424)	PI4K2A (ENSCHYG00000021371)	MORN4 (ENSCHYG00000021303)	HOGA1 (ENSCHYG00000021197)	ANKRD2 (ENSCHYG00000020741)	UBTD1 (ENSCHYG00000020651)	MMS19 (ENSCHYG00000020307)	ZDHHC16 (ENSCHYG00000019968)	ENSCHYG00000019703	PGAM1 (ENSCHYG00000019647)	RRP12 (ENSCHYG00000018769)	ENSCHYG00000018643
Yarkand deer	MODERN SPECIES	32	PLIN4 (ENSCHYG00000001804) #7	HDGFL2 (ENSCHYG00000001844) #8	UBXN6 (ENSCHYG00000001896) #9	CHAF1A (ENSCHYG00000001952) #10	SH3GL1 (ENSCHYG00000002051) #11	MPND (ENSCHYG00000002106) #12	STAP2 (ENSCHYG00000002168) #13	FSD1 (ENSCHYG00000002221) #14	ENSCHYG00000002245	SHD (ENSCHYG00000002265) #16	YJU2 (ENSCHYG00000002292) #17	EBI3 (ENSCHYG00000002313) #18	ANKRD24 (ENSCHYG00000002425) #19	SIRT6 (ENSCHYG00000002658) #20	CREB3L3 (ENSCHYG00000002681) #21	ENSCHYG00000002715 #22	ZBTB7A (ENSCHYG00000002749) #23	PIAS4 (ENSCHYG00000002769) #24	ENSCHYG00000002813 #25	DAPK3 (ENSCHYG00000002848) #26	NMRK2 (ENSCHYG00000002878) #27	ATCAY (ENSCHYG00000002905) #28	ZFR2 (ENSCHYG00000002949) #29	MRPL54 (ENSCHYG00000002977) #32	MATK (ENSCHYG00000003016) #30	RAX2 (ENSCHYG00000003107) #31	APBA3 (ENSCHYG00000003126) #33	TJP3 (ENSCHYG00000003169) #34	PIP5K1C (ENSCHYG00000003264) #35	CACTIN (ENSCHYG00000003483) #36	TBXA2R (ENSCHYG00000003508) #37
Atlantogenata	ANCESTRAL SPECIES	79	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a #22
Armadillo	MODERN SPECIES	2220																MAP2K2 (ENSDNOG00000013548) #22
Afrotheria	ANCESTRAL SPECIES	97	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Afrotheria_a	ANCESTRAL SPECIES	101	ENSGT00950000182920.b.a.a.c.b ##7	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163572 #31	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00940000159258 #35	ENSGT00950000183102.A.a #36	ENSGT01030000234559.a.a.a #37
Hyrax	MODERN SPECIES	11406																MAP2K2 (ENSPCAG00000012529) #22
Elephant	MODERN SPECIES	60	PLIN5 (ENSLAFG00000020616) ##7	PLIN4 (ENSLAFG00000000789) #7	HDGFL2 (ENSLAFG00000029578) #8	UBXN6 (ENSLAFG00000028613) #9	CHAF1A (ENSLAFG00000000293) #10	SH3GL1 (ENSLAFG00000023065) #11	MPND (ENSLAFG00000029255) #12	STAP2 (ENSLAFG00000026115) #13	FSD1 (ENSLAFG00000030096) #14	SHD (ENSLAFG00000009357) #16	YJU2 (ENSLAFG00000007891) #17	EBI3 (ENSLAFG00000022621) #18	ANKRD24 (ENSLAFG00000009676) #19	SIRT6 (ENSLAFG00000026522) #20	ENSLAFG00000010510 #21	MAP2K2 (ENSLAFG00000015636) #22	PIAS4 (ENSLAFG00000009166) #24	EEF2 (ENSLAFG00000009159) #25	DAPK3 (ENSLAFG00000029621) #26	NMRK2 (ENSLAFG00000031525) #27	ATCAY (ENSLAFG00000012399) #28	ZFR2 (ENSLAFG00000020813) #29	MATK (ENSLAFG00000022360) #30	MRPL54 (ENSLAFG00000029657) #32	APBA3 (ENSLAFG00000015080) #33	TJP3 (ENSLAFG00000027222) #34	PIP5K1C (ENSLAFG00000022484) #35	ENSLAFG00000031774 #36	TBXA2R (ENSLAFG00000027874) #37	ENSLAFG00000030325	GIPC3 (ENSLAFG00000007849)
Tenrec	MODERN SPECIES	2472																ENSETEG00000016447 #22
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00390000001450.h.a.b.b	ENSGT00940000159258 #35	ENSGT00950000183102.B ##36
Opossum	MODERN SPECIES	2	ENSMODG00000001022	PLIN5 (ENSMODG00000001016) ##7	ENSMODG00000000998 #7	HDGFL2 (ENSMODG00000000988) #8	ENSMODG00000000967 #9	CHAF1A (ENSMODG00000000950) #10	SH3GL1 (ENSMODG00000000931) #11	MPND (ENSMODG00000000907) #12	STAP2 (ENSMODG00000000895) #13	FSD1 (ENSMODG00000000881) #14	ENSMODG00000027838 #15	SHD (ENSMODG00000000858) #16	YJU2 (ENSMODG00000000841) #17	ENSMODG00000024036 #18	CREB3L3 (ENSMODG00000000817) #21	MAP2K2 (ENSMODG00000000809) #22	ZBTB7A (ENSMODG00000000778) #23	ENSMODG00000045895	PIAS4 (ENSMODG00000000765) #24	EEF2 (ENSMODG00000000750) #25	DAPK3 (ENSMODG00000043143) #26	NMRK2 (ENSMODG00000000709) #27	ATCAY (ENSMODG00000000696) #28	ZFR2 (ENSMODG00000000675) #29	MATK (ENSMODG00000000637) #30	ENSMODG00000000607	ENSMODG00000000602 #32	APBA3 (ENSMODG00000000598) #33	TJP3 (ENSMODG00000000580) #34	VN2R501 (ENSMODG00000037853)	monDomV1R1215 (ENSMODG00000039829)
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000154650.d.f.d.a.a	ENSGT00390000001450.h.a.b.b
Diprotodontia	ANCESTRAL SPECIES	20	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000154650.d.f.d.a.a	ENSGT00390000001450.h.a.b.b
Diprotodontia_a	ANCESTRAL SPECIES	16	ENSGT00950000182920.b.a.a.c.a.b.b #7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00390000007100 #15	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000162148 #29	ENSGT00940000160775 #30	ENSGT00940000163917.b	ENSGT00390000001201 #32	ENSGT00940000160384 #33	ENSGT00940000160036 #34	ENSGT00950000182890.D.c.b.a.a.b.a.a.a	ENSGT00940000154650.d.f.d.a.a	ENSGT00390000001450.h.a.b.b
koala	MODERN SPECIES	214	ENSPCIG00000012395 ##7	ENSPCIG00000003958 #7	HDGFL2 (ENSPCIG00000003977) #8	UBXN6 (ENSPCIG00000006287) #9	CHAF1A (ENSPCIG00000006291) #10	SH3GL1 (ENSPCIG00000006316) #11	MPND (ENSPCIG00000006318) #12	STAP2 (ENSPCIG00000006321) #13	FSD1 (ENSPCIG00000006329) #14	SHD (ENSPCIG00000006337) #16	YJU2 (ENSPCIG00000006341) #17	EBI3 (ENSPCIG00000036381) #18	ENSPCIG00000035510 #19	SIRT6 (ENSPCIG00000006432) #20	CREB3L3 (ENSPCIG00000006434) #21	MAP2K2 (ENSPCIG00000006438) #22	ZBTB7A (ENSPCIG00000025417) #23	PIAS4 (ENSPCIG00000025412) #24	EEF2 (ENSPCIG00000025403) #25	DAPK3 (ENSPCIG00000025399) #26	NMRK2 (ENSPCIG00000025398) #27	ATCAY (ENSPCIG00000025395) #28	ZFR2 (ENSPCIG00000025388) #29	MATK (ENSPCIG00000025386) #30	ENSPCIG00000025384	MRPL54 (ENSPCIG00000025383) #32	APBA3 (ENSPCIG00000025381) #33	TJP3 (ENSPCIG00000025374) #34
Common wonbat	MODERN SPECIES	580	HDGFL2 (ENSVURG00010024626) #8	UBXN6 (ENSVURG00010024630) #9	ENSVURG00010024633 #10	SH3GL1 (ENSVURG00010024635) #11	MPND (ENSVURG00010024637) #12	STAP2 (ENSVURG00010024642) #13	FSD1 (ENSVURG00010024652) #14	ENSVURG00010024655 #15	SHD (ENSVURG00010024657) #16	ENSVURG00010024660	YJU2 (ENSVURG00010024661) #17	EBI3 (ENSVURG00010024663) #18	ANKRD24 (ENSVURG00010024667) #19	SIRT6 (ENSVURG00010024673) #20	CREB3L3 (ENSVURG00010024676) #21	MAP2K2 (ENSVURG00010024677) #22	ZBTB7A (ENSVURG00010024681) #23	PIAS4 (ENSVURG00010024683) #24	EEF2 (ENSVURG00010024687) #25	DAPK3 (ENSVURG00010024691) #26	ATCAY (ENSVURG00010024696) #28	ZFR2 (ENSVURG00010024701) #29	MATK (ENSVURG00010024711) #30	ENSVURG00010024713	MRPL54 (ENSVURG00010024716) #32	APBA3 (ENSVURG00010024720) #33	TJP3 (ENSVURG00010024727) #34	ENSVURG00010024737	ENSVURG00010024739	ENSVURG00010024741	ENSVURG00010024743
Wallaby	MODERN SPECIES	3377																ENSMEUG00000012103 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000002056 #8	PLIN5 (ENSSHAG00000003441) ##7	ENSSHAG00000027707 #7	UBXN6 (ENSSHAG00000029235) #9	CHAF1A (ENSSHAG00000000307) #10	ENSSHAG00000000851 #11	MPND (ENSSHAG00000000206) #12	STAP2 (ENSSHAG00000023692) #13	FSD1 (ENSSHAG00000030022) #14	SHD (ENSSHAG00000010563) #16	YJU2 (ENSSHAG00000010428) #17	EBI3 (ENSSHAG00000027537) #18	ANKRD24 (ENSSHAG00000010216) #19	SIRT6 (ENSSHAG00000009965) #20	CREB3L3 (ENSSHAG00000009874) #21	MAP2K2 (ENSSHAG00000009251) #22	ZBTB7A (ENSSHAG00000027505) #23	PIAS4 (ENSSHAG00000024821) #24	EEF2 (ENSSHAG00000007539) #25	DAPK3 (ENSSHAG00000030421) #26	ENSSHAG00000030604 #27	ATCAY (ENSSHAG00000006184) #28	ENSSHAG00000004724 #29	MATK (ENSSHAG00000003362) #30	ENSSHAG00000003118	MRPL54 (ENSSHAG00000002557) #32	APBA3 (ENSSHAG00000002223) #33	TJP3 (ENSSHAG00000001439) #34	ENSSHAG00000024272	ENSSHAG00000030563	ENSSHAG00000030933
Platypus	MODERN SPECIES	85	SMARCA4 (ENSOANG00000004355)	TIMM29 (ENSOANG00000036642)	YIPF2 (ENSOANG00000050867)	CARM1 (ENSOANG00000045313)	ENSOANG00000009834	TMED1 (ENSOANG00000037520)	DNM2 (ENSOANG00000013365)	ENSOANG00000006439 #13	FSD1 (ENSOANG00000006431) #14	SHD (ENSOANG00000014374) #16	YJU2 (ENSOANG00000008914) #17	EBI3 (ENSOANG00000028577) #18	ANKRD24 (ENSOANG00000048879) #19	SIRT6 (ENSOANG00000008787) #20	CREB3L3 (ENSOANG00000013246) #21	MAP2K2 (ENSOANG00000045918) #22	ZBTB7A (ENSOANG00000045647) #23	PIAS4 (ENSOANG00000031620) #24	ENSOANG00000014032 #25	DAPK3 (ENSOANG00000003319) #26	NMRK2 (ENSOANG00000035130) #27	ATCAY (ENSOANG00000006292) #28	ENSOANG00000011220 #29	MATK (ENSOANG00000010674) #30	ENSOANG00000037708 #32	APBA3 (ENSOANG00000006293) #33	TJP3 (ENSOANG00000006294) #34	PIP5K1C (ENSOANG00000006295) #35	TBXA2R (ENSOANG00000037569) #37	HMG20B (ENSOANG00000013515)	ENSOANG00000014325
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000153424.a.a.d	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00960000189486	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000153424.a.a.d	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A
Archosauria	ANCESTRAL SPECIES	16	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00960000189486	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000153424.a.a.d	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A
Aves	ANCESTRAL SPECIES	20	ENSGT00950000182920.b.a.a.d.d.a ##7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Neognathae	ANCESTRAL SPECIES	21	ENSGT00950000182920.b.a.a.d.d.a ##7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00950000182920.b.a.a.d.d.a ##7	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050.k #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00960000189545	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT01030000234573.A.b.b.a	ENSGT00940000154737.c #11	ENSGT00440000034888 #10	ENSGT00940000157273 #9	ENSGT00940000153942.a.f #8	ENSGT00950000182920.b.a.a.d.d.a ##7	ENSGT00950000182920.b.a.a.d.d.b ##7	ENSGT00940000165355	ENSGT00940000159170	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162457	ENSGT00940000160580	ENSGT00940000154739.B
Japanese quail	MODERN SPECIES	20	TCF3 (ENSCJPG00005010314)	UQCR11 (ENSCJPG00005010315)	ENSCJPG00005010316	MEX3D (ENSCJPG00005010317)	MIER2 (ENSCJPG00005010318)	SH3GL1 (ENSCJPG00005010319) #11	CHAF1A (ENSCJPG00005010320) #10	UBXN6 (ENSCJPG00005010321) #9	HDGFL2 (ENSCJPG00005010322) #8	ENSCJPG00005010323 ##7	ENSCJPG00005010324 ##7	ENSCJPG00005010325	SEMA6B (ENSCJPG00005010326)	SIRT6 (ENSCJPG00005010328) #20	CREB3L3 (ENSCJPG00005010329) #21	MAP2K2 (ENSCJPG00005010330) #22	C2CD4C (ENSCJPG00005010331)	ENSCJPG00005010332	ENSCJPG00005010333	ENSCJPG00005010334	TPGS1 (ENSCJPG00005010335)	CDC34 (ENSCJPG00005010336)	BSG (ENSCJPG00005010337)	HCN2 (ENSCJPG00005010338)	POLRMT (ENSCJPG00005010339)	FGF22 (ENSCJPG00005010340)	RNF126 (ENSCJPG00005010341)	FSTL3 (ENSCJPG00005010342)	PRSS57 (ENSCJPG00005010343)	PALM (ENSCJPG00005010344)	ENSCJPG00005010345
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00390000018299	ENSGT00950000183005.b.c	ENSGT00940000162613	ENSGT01030000234573.A.b.b.a	ENSGT00940000154737.c #11	ENSGT00440000034888 #10	ENSGT00940000157273 #9	ENSGT00940000153942.a.f #8	ENSGT00950000182920.b.a.a.d.d.a ##7	ENSGT00950000182920.b.a.a.d.d.b ##7	ENSGT00940000165355	ENSGT00940000159170	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162457	ENSGT00940000160580	ENSGT00940000154739.B
Turkey	MODERN SPECIES	23	ENSMGAG00000019264	ENSMGAG00000018004	FSTL3 (ENSMGAG00000003378)	ENSMGAG00000003385	FGF22 (ENSMGAG00000021556)	ENSMGAG00000003312	HCN2 (ENSMGAG00000003181)	ENSMGAG00000003243	BSG (ENSMGAG00000003132)	ENSMGAG00000019149	ENSMGAG00000003104	ENSMGAG00000002676	ENSMGAG00000003095	ENSMGAG00000013112	ENSMGAG00000002308	ENSMGAG00000002951 #22	ANKRD24 (ENSMGAG00000002898) #19	ENSMGAG00000002932 #20	CREB3L3 (ENSMGAG00000002752) #21	ENSMGAG00000002886	ENSMGAG00000020137	ENSMGAG00000019508 ##7	ENSMGAG00000021893 #8	ENSMGAG00000002817 #8	ENSMGAG00000002850 ##7	ENSMGAG00000002708 #10	ENSMGAG00000002775 #9	SH3GL1 (ENSMGAG00000002570) #11	ENSMGAG00000002532	ENSMGAG00000002325	ENSMGAG00000002493
Chicken	MODERN SPECIES	20	UQCR11 (ENSGALG00010027746)	MBD3 (ENSGALG00010027801)	MEX3D (ENSGALG00010027811)	MIER2 (ENSGALG00010027100)	SH3GL1 (ENSGALG00010027192) #11	CHAF1A (ENSGALG00010027202) #10	UBXN6 (ENSGALG00010027208) #9	HDGFRP2 (ENSGALG00010027211) #8	PLIN4 (ENSGALG00010027214) ##7	ENSGALG00010028734 ##7	ENSGALG00010027216	SEMA6B (ENSGALG00010027217)	ANKRD24 (ENSGALG00010027220) #19	SIRT6 (ENSGALG00010027223) #20	CREB3L3 (ENSGALG00010027225) #21	MAP2K2 (ENSGALG00010027230) #22	C2CD4C (ENSGALG00010027249)	ENSGALG00010027258	ENSGALG00010028453	ENSGALG00010028467	TPGS1 (ENSGALG00010028471)	CDC34 (ENSGALG00010028473)	BSG (ENSGALG00010027468)	HCN2 (ENSGALG00010027479)	POLRMT (ENSGALG00010027511)	FGF22 (ENSGALG00010027553)	RNF126 (ENSGALG00010027358)	FSTL3 (ENSGALG00010027364)	PRSS57 (ENSGALG00010027371)	PALM (ENSGALG00010027382)	ENSGALG00010027401
Anatidae	ANCESTRAL SPECIES	57										ENSGT00940000159440 #14	ENSGT00530000063615.a #17	ENSGT00940000160050.k #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000154595	ENSGT00390000000051	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT01030000234515.a.b.b.c	ENSGT01030000234515.a.b.b.d	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000
Pink-footed goose	MODERN SPECIES	328									FSD1 (ENSABRG00000013237) #14	ENSABRG00000013221	YJU2 (ENSABRG00000013209) #17	EBI3 (ENSABRG00000013200) #18	ANKRD24 (ENSABRG00000013170) #19	SIRT6 (ENSABRG00000013168) #20	CREB3L3 (ENSABRG00000013162) #21	MAP2K2 (ENSABRG00000013052) #22	ZBTB7A (ENSABRG00000013020) #23	PIAS4 (ENSABRG00000013013) #24	EEF2 (ENSABRG00000012999) #25	DAPK3 (ENSABRG00000012994) #26	NMRK2 (ENSABRG00000012985) #27	HNRNPM (ENSABRG00000012911)	TIMM44 (ENSABRG00000012895)	CTXN1 (ENSABRG00000012885)	FBN3 (ENSABRG00000012106)	ENSABRG00000011913	ENSABRG00000011894
Duck	MODERN SPECIES	171																MAP2K2 (ENSAPLG00000011045) #22
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000154595	ENSGT00390000000051	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Passeriformes	ANCESTRAL SPECIES	34	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000154595	ENSGT00390000000051	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237.jb #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000162285	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872
Passeriformes_d	ANCESTRAL SPECIES	35	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000154595	ENSGT00390000000051.l	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237.jb #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000162285	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872	ENSGT00950000185433
Flycatcher	MODERN SPECIES	20	CHAF1A (ENSFALG00000001107) #10	SH3GL1 (ENSFALG00000025015) #11	MPND (ENSFALG00000024578) #12	FSD1 (ENSFALG00000001075) #14	ENSFALG00000025364	YJU2 (ENSFALG00000001069) #17	ENSFALG00000001059	ENSFALG00000028285	ENSFALG00000001036	ENSFALG00000000957	EBI3 (ENSFALG00000000935) #18	ENSFALG00000000929 #19	ENSFALG00000026801 #19	SIRT6 (ENSFALG00000000913) #20	CREB3L3 (ENSFALG00000000900) #21	MAP2K2 (ENSFALG00000000885) #22	ZBTB7A (ENSFALG00000000874) #23	PIAS4 (ENSFALG00000000872) #24	DAPK3 (ENSFALG00000000853) #26	NMRK2 (ENSFALG00000000845) #27	ATCAY (ENSFALG00000000839) #28	ENSFALG00000015092	EEF2 (ENSFALG00000000859) #25	ENSFALG00000001343	MPV17L2 (ENSFALG00000001340)	RAB3A (ENSFALG00000026129)	ENSFALG00000001336	ENSFALG00000028883	ENSFALG00000009478	PGPEP1 (ENSFALG00000009462)	ENSFALG00000009453
Passeriformes_g	ANCESTRAL SPECIES	39			ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a.a #17	ENSGT00530000063615.a.b #17	ENSGT00940000154595	ENSGT00390000000051.l	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237.jb #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000162285	ENSGT00940000162806	ENSGT00940000166941	ENSGT00610000086173	ENSGT00390000015368.a.a
Medium ground finch	MODERN SPECIES	317								ENSGFOG00000009063 #17	HNRNPM (ENSGFOG00000009068)	TIMM44 (ENSGFOG00000009101)	ENSGFOG00000009346	ENSGFOG00000009362	EBI3 (ENSGFOG00000009371) #18	SIRT6 (ENSGFOG00000009393) #20	CREB3L3 (ENSGFOG00000009442) #21	MAP2K2 (ENSGFOG00000009488) #22	ENSGFOG00000009528 #23	PIAS4 (ENSGFOG00000009535) #24	EEF2 (ENSGFOG00000009554) #25	DAPK3 (ENSGFOG00000009572) #26	NMRK2 (ENSGFOG00000009580) #27	ATCAY (ENSGFOG00000009591) #28	DUS3L (ENSGFOG00000009604)	MPV17L2 (ENSGFOG00000009615)	RAB3A (ENSGFOG00000009622)	ENSGFOG00000009627	ENSGFOG00000009640	LSM4 (ENSGFOG00000009643)	PGPEP1 (ENSGFOG00000009646)	ENSGFOG00000009650
Passeroidea	ANCESTRAL SPECIES	38			ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a.a #17	ENSGT00530000063615.a.b #17	ENSGT00940000154595	ENSGT00390000000051.l	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237.jb #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000162285	ENSGT00940000162806	ENSGT00940000166941	ENSGT00610000086173	ENSGT00390000015368.a.a
Zebra finch	MODERN SPECIES	21	ENSTGUG00000025953 #14	ENSTGUG00000023253	ENSTGUG00000029047 #16	ENSTGUG00000000935 #17	HNRNPM (ENSTGUG00000000938)	ATP5F1D (ENSTGUG00000000895)	TIMM44 (ENSTGUG00000013849)	ENSTGUG00000022997	ENSTGUG00000025566	ENSTGUG00000023585	ENSTGUG00000000946	EBI3 (ENSTGUG00000024855) #18	ANKRD24 (ENSTGUG00000000981) #19	SIRT6 (ENSTGUG00000000987) #20	CREB3L3 (ENSTGUG00000000991) #21	MAP2K2 (ENSTGUG00000000994) #22	ZBTB7A (ENSTGUG00000022308) #23	PIAS4 (ENSTGUG00000001000) #24	EEF2 (ENSTGUG00000001004) #25	DAPK3 (ENSTGUG00000001010) #26	NMRK2 (ENSTGUG00000001014) #27	ATCAY (ENSTGUG00000001016) #28	NRTN (ENSTGUG00000001018)	ENSTGUG00000023469	ENSTGUG00000028884	ENSTGUG00000026529	PDE4C (ENSTGUG00000024006)	JUND (ENSTGUG00000023330)	ENSTGUG00000001030	ENSTGUG00000022771	ENSTGUG00000022040
Common canary	MODERN SPECIES	109	CRTC1 (ENSSCAG00000011818)	ENSSCAG00000011873	KLHL26 (ENSSCAG00000011874)	TMEM59L (ENSSCAG00000011880)	CRLF1 (ENSSCAG00000011886)	ENSSCAG00000011890	UBA52 (ENSSCAG00000011895)	KXD1 (ENSSCAG00000011900)	FKBP8 (ENSSCAG00000011929)	ELL (ENSSCAG00000012011)	ENSSCAG00000012020	EBI3 (ENSSCAG00000012039) #18	ENSSCAG00000012041	SIRT6 (ENSSCAG00000012043) #20	CREB3L3 (ENSSCAG00000012049) #21	MAP2K2 (ENSSCAG00000012101) #22	ZBTB7A (ENSSCAG00000012113) #23	PIAS4 (ENSSCAG00000012119) #24	EEF2 (ENSSCAG00000012124) #25	DAPK3 (ENSSCAG00000012137) #26	NMRK2 (ENSSCAG00000012140) #27	CTXN1 (ENSSCAG00000012543)	ENSSCAG00000012552	HNRNPM (ENSSCAG00000012564)	ENSSCAG00000012572 #17
Great tit	MODERN SPECIES	21	HDGFL2 (ENSPMJG00000012872) #8	UBXN6 (ENSPMJG00000012871) #9	CHAF1A (ENSPMJG00000012870) #10	SH3GL1 (ENSPMJG00000012869) #11	MPND (ENSPMJG00000012868) #12	FSD1 (ENSPMJG00000012867) #14	SHD (ENSPMJG00000012866) #16	YJU2 (ENSPMJG00000012865) #17	HNRNPM (ENSPMJG00000012864)	TIMM44 (ENSPMJG00000012863)	CTXN1 (ENSPMJG00000012862)	FBN3 (ENSPMJG00000011752)	ANKRD24 (ENSPMJG00000011751) #19	SIRT6 (ENSPMJG00000011750) #20	CREB3L3 (ENSPMJG00000011749) #21	MAP2K2 (ENSPMJG00000011748) #22	ZBTB7A (ENSPMJG00000011747) #23	PIAS4 (ENSPMJG00000011744) #24	EEF2 (ENSPMJG00000011741) #25	DAPK3 (ENSPMJG00000011740) #26	NMRK2 (ENSPMJG00000011739) #27	ATCAY (ENSPMJG00000011738) #28	NRTN (ENSPMJG00000011737)	ENSPMJG00000011736	DUS3L (ENSPMJG00000011735)	MPV17L2 (ENSPMJG00000011734)	RAB3A (ENSPMJG00000011732)	ENSPMJG00000011731	ENSPMJG00000011730	LSM4 (ENSPMJG00000011729)	PGPEP1 (ENSPMJG00000011728)
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000154595	ENSGT00390000000051	ENSGT00940000154412.C	ENSGT00950000183158.B.b	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Kakapo	MODERN SPECIES	13	ZAP70 (ENSSHBG00005014385)	ADAMTS10 (ENSSHBG00005014419)	MYO1F (ENSSHBG00005014552)	ZNF414 (ENSSHBG00005016095)	ENSSHBG00005016097	ACER1 (ENSSHBG00005016101)	MLLT1 (ENSSHBG00005016105)	ACSBG2 (ENSSHBG00005016127)	RFX2 (ENSSHBG00005016885)	ENSSHBG00005016968	FBN3 (ENSSHBG00005017003)	EBI3 (ENSSHBG00005017066) #18	ANKRD24 (ENSSHBG00005017072) #19	SIRT6 (ENSSHBG00005017080) #20	CREB3L3 (ENSSHBG00005017085) #21	MAP2K2 (ENSSHBG00005017092) #22	ZBTB7A (ENSSHBG00005017095) #23	ENSSHBG00005017098	PIAS4 (ENSSHBG00005017101) #24	EEF2 (ENSSHBG00005017109) #25	ENSSHBG00005017116	ENSSHBG00005017120 #27	ATCAY (ENSSHBG00005017123) #28	ENSSHBG00005017126	DUS3L (ENSSHBG00005017130)	TIMM44 (ENSSHBG00005017134)	HNRNPM (ENSSHBG00005017146)	LMNB2 (ENSSHBG00005017159)	TIMM13 (ENSSHBG00005017163)	ENSSHBG00005017170	ENSSHBG00005017173
Golden eagle	MODERN SPECIES	3	CHAF1A (ENSACCG00020015292) #10	SH3GL1 (ENSACCG00020015308) #11	MPND (ENSACCG00020015358) #12	STAP2 (ENSACCG00020015392) #13	FSD1 (ENSACCG00020015405) #14	ENSACCG00020015425	SHD (ENSACCG00020015436) #16	YJU2 (ENSACCG00020015454) #17	TIMM44 (ENSACCG00020015520)	CTXN1 (ENSACCG00020015575)	FBN3 (ENSACCG00020015604)	EBI3 (ENSACCG00020015642) #18	ANKRD24 (ENSACCG00020015679) #19	SIRT6 (ENSACCG00020015712) #20	CREB3L3 (ENSACCG00020015724) #21	MAP2K2 (ENSACCG00020015740) #22	ZBTB7A (ENSACCG00020015748) #23	PIAS4 (ENSACCG00020015756) #24	EEF2 (ENSACCG00020015772) #25	DAPK3 (ENSACCG00020015793) #26	NMRK2 (ENSACCG00020015806) #27	ATCAY (ENSACCG00020015815) #28	ENSACCG00020015834	NRTN (ENSACCG00020015844)	DUS3L (ENSACCG00020015859)	ENSACCG00020015877	RFX2 (ENSACCG00020015906)	ACSBG2 (ENSACCG00020015951)	MLLT1 (ENSACCG00020015972)	ACER1 (ENSACCG00020015987)	ENSACCG00020015996
African ostrich	MODERN SPECIES	700							ENSSCUG00000014917 ##7	ENSSCUG00000014937 #8	ENSSCUG00000014946 #8	UBXN6 (ENSSCUG00000014948) #9	CHAF1A (ENSSCUG00000014953) #10	SH3GL1 (ENSSCUG00000014955) #11	YJU2 (ENSSCUG00000014959) #17	SIRT6 (ENSSCUG00000014962) #20	CREB3L3 (ENSSCUG00000014966) #21	MAP2K2 (ENSSCUG00000014972) #22	ZBTB7A (ENSSCUG00000014977) #23	PIAS4 (ENSSCUG00000014980) #24	EEF2 (ENSSCUG00000014985) #25	DAPK3 (ENSSCUG00000014989) #26	NMRK2 (ENSSCUG00000014992) #27	ATCAY (ENSSCUG00000014996) #28	ENSSCUG00000015004
Australian saltwater crocodile	MODERN SPECIES	26	UBXN6 (ENSCPRG00005008794) #9	ENSCPRG00005008792	HDGFL2 (ENSCPRG00005008789) #8	ENSCPRG00005008788 ##7	ENSCPRG00005008785 #7	ENSCPRG00005008783	SHD (ENSCPRG00005008780) #16	ENSCPRG00005008778	YJU2 (ENSCPRG00005008776) #17	EBI3 (ENSCPRG00005008773) #18	ENSCPRG00005008771	ENSCPRG00005008770 #19	SIRT6 (ENSCPRG00005008769) #20	ENSCPRG00005008768	CREB3L3 (ENSCPRG00005008766) #21	MAP2K2 (ENSCPRG00005008753) #22	ZBTB7A (ENSCPRG00005008750) #23	PIAS4 (ENSCPRG00005008740) #24	EEF2 (ENSCPRG00005008734) #25	DAPK3 (ENSCPRG00005008729) #26	ENSCPRG00005008720	NMRK2 (ENSCPRG00005008704) #27	ATCAY (ENSCPRG00005008680) #28
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00960000189486	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00960000189486	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
Goode s thornscrub tortoise	MODERN SPECIES	14	SH3GL1 (ENSGEVG00005007078) #11	MPND (ENSGEVG00005007164) #12	STAP2 (ENSGEVG00005007367) #13	FSD1 (ENSGEVG00005007416) #14	ENSGEVG00005007514	ENSGEVG00005007532	SHD (ENSGEVG00005007552) #16	YJU2 (ENSGEVG00005007572) #17	EBI3 (ENSGEVG00005007616) #18	ENSGEVG00005007658	ENSGEVG00005007684	ENSGEVG00005007710 #19	SIRT6 (ENSGEVG00005007810) #20	ENSGEVG00005007845	CREB3L3 (ENSGEVG00005007896) #21	MAP2K2 (ENSGEVG00005008031) #22	ZBTB7A (ENSGEVG00005008063) #23	PIAS4 (ENSGEVG00005008086) #24	EEF2 (ENSGEVG00005008117) #25	DAPK3 (ENSGEVG00005008155) #26	NMRK2 (ENSGEVG00005008195) #27	ATCAY (ENSGEVG00005008280) #28	ENSGEVG00005008323	NRTN (ENSGEVG00005008340)	DUS3L (ENSGEVG00005008360)	PRR22 (ENSGEVG00005008381)	ENSGEVG00005008408	ENSGEVG00005008437	RFX2 (ENSGEVG00005008484)	ACSBG2 (ENSGEVG00005008719)	MLLT1 (ENSGEVG00005008772)
Abingdon island giant tortoise	MODERN SPECIES		UBXN6 (ENSCABG00000001808) #9	CHAF1A (ENSCABG00000001784) #10	SH3GL1 (ENSCABG00000001777) #11	MPND (ENSCABG00000001772) #12	STAP2 (ENSCABG00000001769) #13	FSD1 (ENSCABG00000001768) #14	ENSCABG00000001765	SHD (ENSCABG00000001762) #16	YJU2 (ENSCABG00000001760) #17	EBI3 (ENSCABG00000001755) #18	ENSCABG00000001754 #19	ENSCABG00000001752 #19	SIRT6 (ENSCABG00000001750) #20	ENSCABG00000001748	CREB3L3 (ENSCABG00000001744) #21	MAP2K2 (ENSCABG00000001574) #22	ZBTB7A (ENSCABG00000001566) #23	PIAS4 (ENSCABG00000001521) #24	EEF2 (ENSCABG00000001509) #25	ENSCABG00000001506	ENSCABG00000001505 #27	ATCAY (ENSCABG00000001480) #28	ENSCABG00000001475	NRTN (ENSCABG00000001472)	DUS3L (ENSCABG00000001466)	PRR22 (ENSCABG00000001462)	ENSCABG00000001457	RFX2 (ENSCABG00000000813)	ACSBG2 (ENSCABG00000000769)	MLLT1 (ENSCABG00000000749)	ACER1 (ENSCABG00000000748)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00950000186319	ENSGT00940000159004 #16	ENSGT00960000189486	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00990000205656	ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
Three-toed box turtle	MODERN SPECIES	92	UBXN6 (ENSTMTG00000022422) #9	CHAF1A (ENSTMTG00000022431) #10	SH3GL1 (ENSTMTG00000022441) #11	MPND (ENSTMTG00000022449) #12	STAP2 (ENSTMTG00000022455) #13	FSD1 (ENSTMTG00000022465) #14	ENSTMTG00000022479	SHD (ENSTMTG00000022481) #16	ENSTMTG00000022484	YJU2 (ENSTMTG00000022488) #17	EBI3 (ENSTMTG00000022491) #18	ENSTMTG00000022494	SIRT6 (ENSTMTG00000022496) #20	ENSTMTG00000022498	CREB3L3 (ENSTMTG00000022502) #21	MAP2K2 (ENSTMTG00000022510) #22	ZBTB7A (ENSTMTG00000022512) #23	PIAS4 (ENSTMTG00000022514) #24	EEF2 (ENSTMTG00000022520) #25	DAPK3 (ENSTMTG00000022524) #26	NMRK2 (ENSTMTG00000022527) #27	ATCAY (ENSTMTG00000022532) #28	ENSTMTG00000022536	NRTN (ENSTMTG00000022537)	DUS3L (ENSTMTG00000022539)	PRR22 (ENSTMTG00000022541)	ENSTMTG00000022546	RFX2 (ENSTMTG00000022549)	ACSBG2 (ENSTMTG00000022558)	MLLT1 (ENSTMTG00000022560)	ACER1 (ENSTMTG00000022566)
painted turtle	MODERN SPECIES	712	HDGFL2 (ENSCPBG00000011057) #8	UBXN6 (ENSCPBG00000011061) #9	CHAF1A (ENSCPBG00000011068) #10	SH3GL1 (ENSCPBG00000011072) #11	MPND (ENSCPBG00000011078) #12	STAP2 (ENSCPBG00000011081) #13	FSD1 (ENSCPBG00000011083) #14	SHD (ENSCPBG00000011087) #16	YJU2 (ENSCPBG00000011090) #17	EBI3 (ENSCPBG00000011093) #18	ENSCPBG00000011094	ENSCPBG00000011099 #19	SIRT6 (ENSCPBG00000011103) #20	ENSCPBG00000011105	CREB3L3 (ENSCPBG00000011108) #21	MAP2K2 (ENSCPBG00000011109) #22	ZBTB7A (ENSCPBG00000011111) #23	PIAS4 (ENSCPBG00000011114) #24	EEF2 (ENSCPBG00000011117) #25	DAPK3 (ENSCPBG00000011124) #26	NMRK2 (ENSCPBG00000011129) #27	ATCAY (ENSCPBG00000011131) #28	ENSCPBG00000011134	NRTN (ENSCPBG00000011135)	DUS3L (ENSCPBG00000011136)	PRR22 (ENSCPBG00000011140)	ENSCPBG00000011144	RFX2 (ENSCPBG00000011147)	ACSBG2 (ENSCPBG00000011150)	MLLT1 (ENSCPBG00000011153)	ACER1 (ENSCPBG00000011158)
Chinese turtle	MODERN SPECIES	2055							SH3GL1 (ENSPSIG00000016203) #11	MPND (ENSPSIG00000015123) #12	FSD1 (ENSPSIG00000013953) #14	YJU2 (ENSPSIG00000012936) #17	EBI3 (ENSPSIG00000012065) #18	ANKRD24 (ENSPSIG00000010410) #19	SIRT6 (ENSPSIG00000008609) #20	ENSPSIG00000008323	CREB3L3 (ENSPSIG00000007295) #21	MAP2K2 (ENSPSIG00000005835) #22	ZBTB7A (ENSPSIG00000017106) #23	PIAS4 (ENSPSIG00000015561) #24	EEF2 (ENSPSIG00000011176) #25	DAPK3 (ENSPSIG00000010970) #26	NMRK2 (ENSPSIG00000010794) #27	ATCAY (ENSPSIG00000008108) #28	ENSPSIG00000000175
Lepidosauria	ANCESTRAL SPECIES	33	ENSGT00940000153942.a.f #8	ENSGT00940000157273 #9	ENSGT00440000034888 #10	ENSGT00940000154737.c #11	ENSGT00940000160191 #12	ENSGT00530000063841.b #13	ENSGT00940000159440 #14	ENSGT00940000159004 #16	ENSGT00530000063615.a #17	ENSGT00940000160050 #18	ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT01030000234534.B.a.a.a.a	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000159842 #27	ENSGT00940000158364 #28	ENSGT00940000163125	ENSGT00950000182993.A.a	ENSGT00550000075134	ENSGT00390000016128	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a
tuatara	MODERN SPECIES	1127	ENSSPUG00000010425 ##7	HDGFL2 (ENSSPUG00000010448) #8	UBXN6 (ENSSPUG00000010482) #9	CHAF1A (ENSSPUG00000010528) #10	SH3GL1 (ENSSPUG00000010563) #11	ENSSPUG00000010644 #12	STAP2 (ENSSPUG00000010751) #13	FSD1 (ENSSPUG00000010821) #14	SHD (ENSSPUG00000010859) #16	YJU2 (ENSSPUG00000010883) #17	EBI3 (ENSSPUG00000010892) #18	ENSSPUG00000010907 #19	SIRT6 (ENSSPUG00000010923) #20	ENSSPUG00000010936	CREB3L3 (ENSSPUG00000010942) #21	MAP2K2 (ENSSPUG00000010956) #22	ZBTB7A (ENSSPUG00000010974) #23	PIAS4 (ENSSPUG00000010985) #24	EEF2 (ENSSPUG00000011003) #25	DAPK3 (ENSSPUG00000011029) #26	ENSSPUG00000011042	NMRK2 (ENSSPUG00000011060) #27	ENSSPUG00000011066 #27	ATCAY (ENSSPUG00000011081) #28	ENSSPUG00000011097	NRTN (ENSSPUG00000011111)	DUS3L (ENSSPUG00000011128)	ENSSPUG00000011156	RFX2 (ENSSPUG00000011275)	ENSSPUG00000011809	MLLT1 (ENSSPUG00000011834)
Episquamata	ANCESTRAL SPECIES	50												ENSGT00940000159237 #19	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00940000166634	ENSGT01030000234539.a.a.a #24
Laterata	ANCESTRAL SPECIES	56															ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000154779.a.a	ENSGT00940000164644	ENSGT00940000160888	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000164521	ENSGT00390000006553	ENSGT00910000144227.s.a	ENSGT00940000161178	ENSGT00940000158364 #28	ENSGT00390000004172.s
Common wall lizard	MODERN SPECIES	9	ENSPMRG00000021679	ENSPMRG00000021687	PPP1R18 (ENSPMRG00000021692)	DHX16 (ENSPMRG00000021700)	C6orf136 (ENSPMRG00000021718)	ATAT1 (ENSPMRG00000021725)	MRPS18B (ENSPMRG00000021734)	ENSPMRG00000021739	PPP1R10 (ENSPMRG00000021748)	ABCF1 (ENSPMRG00000021774)	POLE4 (ENSPMRG00000021791)	ENSPMRG00000021796	GNL1 (ENSPMRG00000021811)	ENSPMRG00000021828	CREB3L3 (ENSPMRG00000021853) #21	MAP2K2 (ENSPMRG00000021863) #22	ZBTB7A (ENSPMRG00000021873) #23	PIAS4 (ENSPMRG00000021877) #24	EEF2 (ENSPMRG00000021887) #25	DAPK3 (ENSPMRG00000021899) #26	ENSPMRG00000021924	ENSPMRG00000021941	ENSPMRG00000021954	ENSPMRG00000021964	ENSPMRG00000022044	ENSPMRG00000022243	FEM1A (ENSPMRG00000022251)	TICAM1 (ENSPMRG00000022253)	ENSPMRG00000022261 ##7	ARRDC5 (ENSPMRG00000022267)	UHRF1 (ENSPMRG00000022277)
Argentine black and white tegu	MODERN SPECIES	94	GAMT (ENSSMRG00000016343)	NDUFS7 (ENSSMRG00000016344)	HCN2 (ENSSMRG00000016345)	POLRMT (ENSSMRG00000016346)	ENSSMRG00000016347	SBNO2 (ENSSMRG00000016348)	STK11 (ENSSMRG00000016349)	CBARP (ENSSMRG00000016350)	CIRBP (ENSSMRG00000016351)	MIDN (ENSSMRG00000016352)	ATP5F1D (ENSSMRG00000016353)	ENSSMRG00000016354	EFNA2 (ENSSMRG00000016355)	ENSSMRG00000016357	ENSSMRG00000016358	MAP2K2 (ENSSMRG00000016359) #22	ZBTB7A (ENSSMRG00000016360) #23	PIAS4 (ENSSMRG00000016361) #24	EEF2 (ENSSMRG00000016362) #25	ENSSMRG00000016364	ENSSMRG00000016365
Toxicofera	ANCESTRAL SPECIES	99													ENSGT00940000159237 #19	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a #22	ENSGT00940000162053 #23	ENSGT00940000166634	ENSGT01030000234539.a.a.a #24
Lizard	MODERN SPECIES	374																ENSACAG00000000286 #22
Elapidae	DUPLICATION
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	71									ENSGT00390000003488.a.b.a	ENSGT00390000000777	ENSGT00940000153321.b.a.t	ENSGT00940000153321.b.a.u	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.q.a #22	ENSGT00940000162053 #23	ENSGT00940000166634	ENSGT01030000234539.a.a.a #24
Indian cobra	MODERN SPECIES		FSD1 (ENSNNAG00000002240) #14	STAP2 (ENSNNAG00000002270) #13	MPND (ENSNNAG00000002302) #12	SH3GL1 (ENSNNAG00000002334) #11	CHAF1A (ENSNNAG00000002363) #10	UBXN6 (ENSNNAG00000002377) #9	ENSNNAG00000002386 #8	ENSNNAG00000002391	ENSNNAG00000002397	ENSNNAG00000002405	ENSNNAG00000002413	ENSNNAG00000002417	ANKRD24 (ENSNNAG00000002428) #19	SIRT6 (ENSNNAG00000002440) #20	CREB3L3 (ENSNNAG00000002452) #21	ENSNNAG00000002482 #22	ZBTB7A (ENSNNAG00000002492) #23	PIAS4 (ENSNNAG00000002501) #24	EEF2 (ENSNNAG00000002519) #25	DAPK3 (ENSNNAG00000002558) #26	ENSNNAG00000002566	ENSNNAG00000002577	ENSNNAG00000002600	ENSNNAG00000002674	ENSNNAG00000002684	ENSNNAG00000002692	ENSNNAG00000002708	ENSNNAG00000002720	ENSNNAG00000002731	ENSNNAG00000002741	ENSNNAG00000002753
Elapidae_a	ANCESTRAL SPECIES	135								ENSGT00390000003488.a.b.a	ENSGT00390000000777	ENSGT00940000153321.b.a.t	ENSGT00940000153321.b.a.u	ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159237 #19	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.q.a #22	ENSGT00940000162053 #23	ENSGT00940000166634	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000153424.a.a.d	ENSGT00940000154779.a.a
Acanthophiinae	ANCESTRAL SPECIES	142												ENSGT01000000215054	ENSGT00940000160088 #20	ENSGT00940000159237 #19	ENSGT00940000159261 #21	ENSGT00940000153487.b.a.q.a #22	ENSGT00940000162053 #23	ENSGT00940000166634	ENSGT01030000234539.a.a.a #24	ENSGT00940000154662 #25	ENSGT00940000161753 #26	ENSGT00940000153424.a.a.d	ENSGT00940000154779.a.a
Mainland tiger snake	MODERN SPECIES	364														ENSNSUG00000010144	SIRT6 (ENSNSUG00000010142) #20	ENSNSUG00000010141 #22	ZBTB7A (ENSNSUG00000010140) #23	PIAS4 (ENSNSUG00000010139) #24	EEF2 (ENSNSUG00000010137) #25	DAPK3 (ENSNSUG00000010086) #26
Eastern brown snake	MODERN SPECIES	171									TNFAIP8L1 (ENSPTXG00000017715)	MYDGF (ENSPTXG00000017716)	ENSPTXG00000017717	ENSPTXG00000017718	ENSPTXG00000017719	ANKRD24 (ENSPTXG00000017721) #19	CREB3L3 (ENSPTXG00000017722) #21	MAP2K2 (ENSPTXG00000017723) #22	ENSPTXG00000017724 #23	ENSPTXG00000011168	PIAS4 (ENSPTXG00000011170) #24	ENSPTXG00000011171	ENSPTXG00000011174
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.q.b #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.q.b #22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.q.b #22
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	125			ENSNSUG00000007548	ENSNSUG00000007554	ENSNSUG00000007555	ENSNSUG00000007556	ENSNSUG00000007557	ENSNSUG00000007562	ENSNSUG00000007567	ENSNSUG00000007578	ENSNSUG00000007601	ENSNSUG00000007603	ENSNSUG00000008487	ENSNSUG00000008491	PRPF40A (ENSNSUG00000008493)	ENSNSUG00000008494 #22	ENSNSUG00000008495	ENSNSUG00000008496	ENSNSUG00000008519	ENSNSUG00000008520
Mainland tiger snake	MODERN SPECIES	124	ENSNSUG00000006991	ENSNSUG00000006993	ENSNSUG00000006995	ENSNSUG00000006996	ENSNSUG00000006997	ENSNSUG00000007000	ENSNSUG00000007012	ENSNSUG00000007030	ENSNSUG00000007037	ENSNSUG00000007038	ENSNSUG00000007040	ENSNSUG00000007393	ENSNSUG00000007412	ENSNSUG00000007421	ARL6IP6 (ENSNSUG00000007422)	ENSNSUG00000007423 #22	ENSNSUG00000007424	ENSNSUG00000007426	ENSNSUG00000007544
Indian cobra	MODERN SPECIES		ENSNNAG00000006910	LYPD6B (ENSNNAG00000006750)	LYPD6 (ENSNNAG00000006713)	MMADHC (ENSNNAG00000019078)	ENSNNAG00000019076	RND3 (ENSNNAG00000019074)	NMI (ENSNNAG00000019069)	TNFAIP6 (ENSNNAG00000019067)	NEB (ENSNNAG00000018647)	ARL5A (ENSNNAG00000018385)	CACNB4 (ENSNNAG00000018360)	STAM2 (ENSNNAG00000018344)	FMNL2 (ENSNNAG00000018336)	ARL6IP6 (ENSNNAG00000018331)	ENSNNAG00000018328	ENSNNAG00000018325 #22	ENSNNAG00000018324	ENSNNAG00000018322	GALNT13 (ENSNNAG00000018312)	KCNJ3 (ENSNNAG00000018307)	NR4A2 (ENSNNAG00000018303)	GPD2 (ENSNNAG00000018298)	ENSNNAG00000018296	CYTIP (ENSNNAG00000018295)	ACVR1C (ENSNNAG00000018291)	ACVR1 (ENSNNAG00000018290)	UPP2 (ENSNNAG00000018288)	CCDC148 (ENSNNAG00000018282)	PKP4 (ENSNNAG00000018276)	DAPL1 (ENSNNAG00000018273)	TANC1 (ENSNNAG00000018263)
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.r #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000153487.b.a.r #22
Blue-lipped sea krait	MODERN SPECIES	9104																MAP2K2 (ENSLLTG00000010579) #22