Euteleostomi	ANCESTRAL SPECIES	1	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000178278	ENSGT01030000234551	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Sarcopterygii	ANCESTRAL SPECIES	1	ENSGT00390000014771.b.b	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Tetrapoda	ANCESTRAL SPECIES	2	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Amniota	ANCESTRAL SPECIES	4	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Mammalia	ANCESTRAL SPECIES	10	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00940000159371 #24	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Theria	ANCESTRAL SPECIES	11	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Glires	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.l #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.l #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Guinea pig	MODERN SPECIES	29	GPBP1 (ENSCPOG00000012341) #7	ENSCPOG00000015027 #8	SETD9 (ENSCPOG00000015025) #9	MAP3K1 (ENSCPOG00000015017) #10	ANKRD55 (ENSCPOG00000007787) #11	IL6ST (ENSCPOG00000013354) #12	IL31RA (ENSCPOG00000006477) #13	DDX4 (ENSCPOG00000004327) #14	ENSCPOG00000006916 #15	ENSCPOG00000033206 #16	SLC38A9 (ENSCPOG00000011733) #17	Plpp1 (ENSCPOG00000009814) #18	MTREX (ENSCPOG00000009797) #19	DHX29 (ENSCPOG00000040097) #20	CCNO (ENSCPOG00000033518) #21	MCIDAS (ENSCPOG00000024511) #22	CDC20B (ENSCPOG00000022417) #23	GPX8 (ENSCPOG00000037462) #24	GZMA (ENSCPOG00000039826) #25	GZMK (ENSCPOG00000008069) #26	ESM1 (ENSCPOG00000032085) #27	SNX18 (ENSCPOG00000031271) #28	HSPB3 (ENSCPOG00000004246) #29	ARL15 (ENSCPOG00000020833) #30	ENSCPOG00000034374 #31	FST (ENSCPOG00000000969) #32	MOCS2 (ENSCPOG00000015752) #33	ITGA2 (ENSCPOG00000015751) #34	ITGA1 (ENSCPOG00000013675) #35	PELO (ENSCPOG00000027406) #36	ISL1 (ENSCPOG00000005782) #37
Hystricomorpha_b	ANCESTRAL SPECIES	68	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.l #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Long-tailed chinchilla	MODERN SPECIES	153	PLK2 (ENSCLAG00000007849)	ACTBL2 (ENSCLAG00000017702)	GPBP1 (ENSCLAG00000007663) #7	MIER3 (ENSCLAG00000007895) #8	SETD9 (ENSCLAG00000008198) #9	MAP3K1 (ENSCLAG00000008338) #10	ANKRD55 (ENSCLAG00000006105) #11	IL6ST (ENSCLAG00000006431) #12	IL31RA (ENSCLAG00000006696) #13	DDX4 (ENSCLAG00000005386) #14	SLC38A9 (ENSCLAG00000006483) #17	PLPP1 (ENSCLAG00000006554) #18	MTREX (ENSCLAG00000006622) #19	DHX29 (ENSCLAG00000007178) #20	CCNO (ENSCLAG00000007264) #21	MCIDAS (ENSCLAG00000007584) #22	CDC20B (ENSCLAG00000007688) #23	GPX8 (ENSCLAG00000008093) #24	GZMA (ENSCLAG00000004932) #25	GZMK (ENSCLAG00000005131) #26	ESM1 (ENSCLAG00000005198) #27	ENSCLAG00000005399	SNX18 (ENSCLAG00000005795) #28	HSPB3 (ENSCLAG00000017635) #29	ARL15 (ENSCLAG00000005872) #30	NDUFS4 (ENSCLAG00000006010) #31	FST (ENSCLAG00000006300) #32	ENSCLAG00000003525	MOCS2 (ENSCLAG00000003598) #33	ITGA2 (ENSCLAG00000003990) #34	ITGA1 (ENSCLAG00000004284) #35
Degu	MODERN SPECIES	42	MIER3 (ENSODEG00000017718) #8	SETD9 (ENSODEG00000016730) #9	MAP3K1 (ENSODEG00000017328) #10	ANKRD55 (ENSODEG00000017209) #11	ENSODEG00000016853	IL6ST (ENSODEG00000016916) #12	IL31RA (ENSODEG00000017222) #13	ENSODEG00000016951 #14	ENSODEG00000017023 #17	ENSODEG00000017001	PLPP1 (ENSODEG00000017162) #18	MTREX (ENSODEG00000017234) #19	ENSODEG00000017015	DHX29 (ENSODEG00000017600) #20	CCNO (ENSODEG00000017316) #21	MCIDAS (ENSODEG00000017218) #22	ENSODEG00000017028	ENSODEG00000017436	ENSODEG00000017117	GPX8 (ENSODEG00000017190) #24	GZMA (ENSODEG00000017144) #25	GZMK (ENSODEG00000017261) #26	ESM1 (ENSODEG00000017112) #27	ENSODEG00000017166 #28	HSPB3 (ENSODEG00000020433) #29	ENSODEG00000017228 #30	ENSODEG00000017434	ENSODEG00000017242	NDUFS4 (ENSODEG00000017447) #31	FST (ENSODEG00000018012) #32	MOCS2 (ENSODEG00000017456) #33
Naked mole-rat female	MODERN SPECIES	7	ENSHGLG00000019923	ANKRD55 (ENSHGLG00000002248) #11	ENSHGLG00000017887	IL6ST (ENSHGLG00000002605) #12	IL31RA (ENSHGLG00000003029) #13	ENSHGLG00000050818	DDX4 (ENSHGLG00000003594) #14	ENSHGLG00000018740 #17	PLPP1 (ENSHGLG00000019302) #18	MTREX (ENSHGLG00000019445) #19	ENSHGLG00000001037	ENSHGLG00000042328	DHX29 (ENSHGLG00000015591) #20	ENSHGLG00000045901	CCNO (ENSHGLG00000003307) #21	MCIDAS (ENSHGLG00000003661) #22	ENSHGLG00000032255	ENSHGLG00000042265	CDC20B (ENSHGLG00000044236) #23	GPX8 (ENSHGLG00000036623) #24	GZMA (ENSHGLG00000004882) #25	GZMK (ENSHGLG00000005273) #26	ENSHGLG00000044478 #27	ENSHGLG00000045228	ENSHGLG00000006304	ENSHGLG00000006664	ENSHGLG00000003360	ENSHGLG00000020188	ENSHGLG00000003526 #28	ENSHGLG00000045713	HSPB3 (ENSHGLG00000035734) #29
Sciuridae	ANCESTRAL SPECIES	32	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.n #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Marmotini	ANCESTRAL SPECIES	54	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.n #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Marmotini_b	ANCESTRAL SPECIES	55	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a.n #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Squirrel	MODERN SPECIES	80	PLK2 (ENSSTOG00000000137)	GPBP1 (ENSSTOG00000003057) #7	MIER3 (ENSSTOG00000007231) #8	SETD9 (ENSSTOG00000007222) #9	MAP3K1 (ENSSTOG00000007184) #10	ENSSTOG00000011940	ANKRD55 (ENSSTOG00000003033) #11	IL6ST (ENSSTOG00000005009) #12	IL31RA (ENSSTOG00000004966) #13	DDX4 (ENSSTOG00000021044) #14	SLC38A9 (ENSSTOG00000024679) #17	PLPP1 (ENSSTOG00000023013) #18	MTREX (ENSSTOG00000010802) #19	DHX29 (ENSSTOG00000010789) #20	CCNO (ENSSTOG00000010783) #21	MCIDAS (ENSSTOG00000020163) #22	CDC20B (ENSSTOG00000032638) #23	GPX8 (ENSSTOG00000010781) #24	GZMA (ENSSTOG00000010768) #25	ENSSTOG00000028224	GZMK (ENSSTOG00000015201) #26	ESM1 (ENSSTOG00000021001) #27	ENSSTOG00000019515	ENSSTOG00000025844 #28	HSPB3 (ENSSTOG00000002196) #29	ARL15 (ENSSTOG00000029588) #30	ENSSTOG00000033600	NDUFS4 (ENSSTOG00000005327) #31	FST (ENSSTOG00000013273) #32	ENSSTOG00000030819	ENSSTOG00000010607 #33
Arctic ground squirrel	MODERN SPECIES	41	PLK2 (ENSUPAG00010004497)	ACTBL2 (ENSUPAG00010004520)	ENSUPAG00010004552 #7	MIER3 (ENSUPAG00010004567) #8	SETD9 (ENSUPAG00010004601) #9	MAP3K1 (ENSUPAG00010004623) #10	ANKRD55 (ENSUPAG00010004664) #11	IL6ST (ENSUPAG00010004692) #12	IL31RA (ENSUPAG00010004767) #13	DDX4 (ENSUPAG00010004791) #14	SLC38A9 (ENSUPAG00010004843) #17	PLPP1 (ENSUPAG00010004851) #18	MTREX (ENSUPAG00010004859) #19	DHX29 (ENSUPAG00010004963) #20	CCNO (ENSUPAG00010004974) #21	MCIDAS (ENSUPAG00010004982) #22	CDC20B (ENSUPAG00010004988) #23	GPX8 (ENSUPAG00010005041) #24	GZMA (ENSUPAG00010005045) #25	ENSUPAG00010005050	GZMK (ENSUPAG00010005054) #26	ESM1 (ENSUPAG00010005059) #27	ENSUPAG00010005064	ENSUPAG00010005077	SNX18 (ENSUPAG00010005081) #28	HSPB3 (ENSUPAG00010005091) #29	ARL15 (ENSUPAG00010005094) #30	NDUFS4 (ENSUPAG00010005134) #31	FST (ENSUPAG00010005146) #32	MOCS2 (ENSUPAG00010005171) #33	ITGA2 (ENSUPAG00010005187) #34
Alpin marmot	MODERN SPECIES	46	ENSMMMG00000008389	ACTBL2 (ENSMMMG00000008397)	GPBP1 (ENSMMMG00000008405) #7	MIER3 (ENSMMMG00000008455) #8	SETD9 (ENSMMMG00000008494) #9	MAP3K1 (ENSMMMG00000008498) #10	ANKRD55 (ENSMMMG00000008634) #11	IL6ST (ENSMMMG00000008666) #12	IL31RA (ENSMMMG00000008944) #13	DDX4 (ENSMMMG00000008971) #14	SLC38A9 (ENSMMMG00000009039) #17	PLPP1 (ENSMMMG00000009061) #18	MTREX (ENSMMMG00000009158) #19	DHX29 (ENSMMMG00000009209) #20	CCNO (ENSMMMG00000009246) #21	MCIDAS (ENSMMMG00000009257) #22	ENSMMMG00000009275	CDC20B (ENSMMMG00000009279) #23	GPX8 (ENSMMMG00000009378) #24	GZMA (ENSMMMG00000009387) #25	ENSMMMG00000009395	GZMK (ENSMMMG00000009433) #26	ESM1 (ENSMMMG00000009444) #27	ENSMMMG00000009448	ENSMMMG00000009450	ENSMMMG00000009464	HSPB3 (ENSMMMG00000009472) #29	ARL15 (ENSMMMG00000009482) #30	NDUFS4 (ENSMMMG00000009503) #31	FST (ENSMMMG00000009517) #32	ENSMMMG00000009548
Eurasian red squirrel	MODERN SPECIES	15	ENSSVLG00005006401	MIER3 (ENSSVLG00005006429) #8	SETD9 (ENSSVLG00005006657) #9	MAP3K1 (ENSSVLG00005006689) #10	ANKRD55 (ENSSVLG00005006848) #11	IL6ST (ENSSVLG00005007036) #12	IL31RA (ENSSVLG00005007167) #13	ENSSVLG00005007316	ENSSVLG00005007344	DDX4 (ENSSVLG00005007457) #14	SLC38A9 (ENSSVLG00005007887) #17	PLPP1 (ENSSVLG00005008180) #18	MTREX (ENSSVLG00005008234) #19	DHX29 (ENSSVLG00005008305) #20	CCNO (ENSSVLG00005008344) #21	MCIDAS (ENSSVLG00005008380) #22	ENSSVLG00005008427	CDC20B (ENSSVLG00005008464) #23	GPX8 (ENSSVLG00005008660) #24	GZMA (ENSSVLG00005008704) #25	GZMK (ENSSVLG00005008745) #26	ESM1 (ENSSVLG00005008786) #27	ENSSVLG00005008805	ENSSVLG00005008821 #28	HSPB3 (ENSSVLG00005008839) #29	ARL15 (ENSSVLG00005008865) #30	ENSSVLG00005008898	ENSSVLG00005008918 #31	FST (ENSSVLG00005008975) #32	MOCS2 (ENSSVLG00005009062) #33	ITGA2 (ENSSVLG00005009124) #34
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Muroidea	ANCESTRAL SPECIES	4	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Cricetidae_B	ANCESTRAL SPECIES	48	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Northern American deer mouse	MODERN SPECIES	6	Plk2 (ENSPEMG00000021774)	Actbl2 (ENSPEMG00000003637)	Gpbp1 (ENSPEMG00000021461) #7	ENSPEMG00000030317	Mier3 (ENSPEMG00000025934) #8	Map3k1 (ENSPEMG00000023508) #10	Ankrd55 (ENSPEMG00000031313) #11	ENSPEMG00000020374 #12	Il31ra (ENSPEMG00000021837) #13	Ddx4 (ENSPEMG00000010086) #14	Slc38a9 (ENSPEMG00000020596) #17	ENSPEMG00000001203 #18	ENSPEMG00000028279	ENSPEMG00000030342 #19	Dhx29 (ENSPEMG00000004741) #20	Mcidas (ENSPEMG00000020819) #22	Gpx8 (ENSPEMG00000030085) #24	Gzma (ENSPEMG00000021019) #25	ENSPEMG00000024735	Gzmk (ENSPEMG00000022178) #26	Esm1 (ENSPEMG00000029485) #27	Cspg4b (ENSPEMG00000020860)	Snx18 (ENSPEMG00000027584) #28	Hspb3 (ENSPEMG00000014777) #29	ENSPEMG00000030184	Arl15 (ENSPEMG00000006719) #30	Ndufs4 (ENSPEMG00000001791) #31	Fst (ENSPEMG00000000790) #32	Mocs2 (ENSPEMG00000018879) #33	Itga2 (ENSPEMG00000017698) #34	Pelo (ENSPEMG00000015584) #36
Prairie vole	MODERN SPECIES	6	Plk2 (ENSMOCG00000012781)	Actbl2 (ENSMOCG00000010587)	Gpbp1 (ENSMOCG00000001834) #7	Mier3 (ENSMOCG00000014665) #8	Map3k1 (ENSMOCG00000003771) #10	Ankrd55 (ENSMOCG00000016220) #11	Il6st (ENSMOCG00000000386) #12	ENSMOCG00000000345	Il31ra (ENSMOCG00000003280) #13	Ddx4 (ENSMOCG00000013250) #14	Slc38a9 (ENSMOCG00000020830) #17	Plpp1 (ENSMOCG00000012696) #18	Mtrex (ENSMOCG00000019886) #19	Dhx29 (ENSMOCG00000010302) #20	Ccno (ENSMOCG00000003116) #21	Mcidas (ENSMOCG00000000303) #22	ENSMOCG00000019278	Gpx8 (ENSMOCG00000012524) #24	Gzma (ENSMOCG00000016354) #25	Gzmk (ENSMOCG00000004745) #26	Esm1 (ENSMOCG00000017512) #27	ENSMOCG00000001468	Snx18 (ENSMOCG00000007685) #28	Hspb3 (ENSMOCG00000008919) #29	ENSMOCG00000017721	Arl15 (ENSMOCG00000021567) #30	Ndufs4 (ENSMOCG00000002566) #31	Fst (ENSMOCG00000018211) #32	Mocs2 (ENSMOCG00000000506) #33	Itga2 (ENSMOCG00000007589) #34	Itga1 (ENSMOCG00000011870) #35
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a #37
Golden Hamster	MODERN SPECIES	620	Rab3c (ENSMAUG00000012132)	Plk2 (ENSMAUG00000009118)	Actbl2 (ENSMAUG00000007066)	Gpbp1 (ENSMAUG00000008647) #7	Mier3 (ENSMAUG00000018815) #8	Map3k1 (ENSMAUG00000007590) #10	ENSMAUG00000012026 #11	ENSMAUG00000016443 #12	Il31ra (ENSMAUG00000014393) #13	Ddx4 (ENSMAUG00000019873) #14	Slc38a9 (ENSMAUG00000018959) #17	Plpp1 (ENSMAUG00000016864) #18	Mtrex (ENSMAUG00000010727) #19	Dhx29 (ENSMAUG00000009094) #20	Ccno (ENSMAUG00000020298) #21	Mcidas (ENSMAUG00000012630) #22	Gpx8 (ENSMAUG00000009131) #24	Gzma (ENSMAUG00000018182) #25	Gzmk (ENSMAUG00000020659) #26	Esm1 (ENSMAUG00000015773) #27	ENSMAUG00000015384	Snx18 (ENSMAUG00000002868) #28	Hspb3 (ENSMAUG00000005583) #29
Chinese hamster chok1gshd	MODERN SPECIES	1	Actbl2 (ENSCGRG00001008182)	Gpbp1 (ENSCGRG00001016805) #7	ENSCGRG00001007110	Mier3 (ENSCGRG00001018250) #8	Map3k1 (ENSCGRG00001018288) #10	Ankrd55 (ENSCGRG00001017453) #11	ENSCGRG00001018890	Il6st (ENSCGRG00001019513) #12	Il31ra (ENSCGRG00001012419) #13	Ddx4 (ENSCGRG00001014961) #14	Slc38a9 (ENSCGRG00001022941) #17	Plpp1 (ENSCGRG00001024401) #18	Mtrex (ENSCGRG00001024680) #19	Dhx29 (ENSCGRG00001002444) #20	Ccno (ENSCGRG00001005803) #21	Mcidas (ENSCGRG00001018268) #22	Gpx8 (ENSCGRG00001019190) #24	Gzma (ENSCGRG00001020359) #25	ENSCGRG00001020661	Gzmk (ENSCGRG00001021019) #26	Esm1 (ENSCGRG00001020964) #27	ENSCGRG00001022309	Snx18 (ENSCGRG00001019947) #28	Hspb3 (ENSCGRG00001007597) #29	ENSCGRG00001020992 #30	ENSCGRG00001007705	Ndufs4 (ENSCGRG00001024001) #31	Fst (ENSCGRG00001024535) #32	MOCS2 (ENSCGRG00001021273) #33	Itga2 (ENSCGRG00001021951) #34	Itga1 (ENSCGRG00001020614) #35
Murinae	ANCESTRAL SPECIES	24	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Mus	ANCESTRAL SPECIES	22	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00900000143743	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00900000143743	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Mouse	MODERN SPECIES	4	Plk2 (ENSMUSG00000021701)	Actbl2 (ENSMUSG00000055194)	Gpbp1 (ENSMUSG00000032745) #7	Gm49496 (ENSMUSG00000116016)	Mier3 (ENSMUSG00000032727) #8	Map3k1 (ENSMUSG00000021754) #10	Ankrd55 (ENSMUSG00000049985) #11	Il6st (ENSMUSG00000021756) #12	Il31ra (ENSMUSG00000050377) #13	Ddx4 (ENSMUSG00000021758) #14	Slc38a9 (ENSMUSG00000047789) #17	Plpp1 (ENSMUSG00000021759) #18	Mtrex (ENSMUSG00000016018) #19	Dhx29 (ENSMUSG00000042426) #20	Ccno (ENSMUSG00000042417) #21	Mcidas (ENSMUSG00000074651) #22	Cdc20b (ENSMUSG00000078926) #23	Gpx8 (ENSMUSG00000021760) #24	Gzma (ENSMUSG00000023132) #25	Gzmk (ENSMUSG00000042385) #26	Esm1 (ENSMUSG00000042379) #27	Cspg4b (ENSMUSG00000021763)	Snx18 (ENSMUSG00000042364) #28	Hspb3 (ENSMUSG00000051456) #29	Arl15 (ENSMUSG00000042348) #30	Ndufs4 (ENSMUSG00000021764) #31	Fst (ENSMUSG00000021765) #32	Mocs2 (ENSMUSG00000015536) #33	Itga2 (ENSMUSG00000015533) #34	Itga1 (ENSMUSG00000042284) #35	Gm49395 (ENSMUSG00000114470)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000011255	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00900000143743	ENSGT00940000159371 #24	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Steppe mouse	MODERN SPECIES	2948						Ankrd55 (ENSMSIG00000012896) #11	Il6st (ENSMSIG00000012997) #12	ENSMSIG00000013272 #14	Slc38a9 (ENSMSIG00000017060) #17	ENSMSIG00000017198	Plpp1 (ENSMSIG00000017203) #18	Mtrex (ENSMSIG00000017236) #19	Dhx29 (ENSMSIG00000017322) #20	ENSMSIG00000017363	Ccno (ENSMSIG00000017380) #21	Mcidas (ENSMSIG00000017390) #22	Cdc20b (ENSMSIG00000017420) #23	Gpx8 (ENSMSIG00000017543) #24
spretus	MODERN SPECIES	4	Plk2 (MGP_SPRETEiJ_G0019763)	Actbl2 (MGP_SPRETEiJ_G0019764)	Gpbp1 (MGP_SPRETEiJ_G0019765) #7	MGP_SPRETEiJ_G0019766	Mier3 (MGP_SPRETEiJ_G0019767) #8	Map3k1 (MGP_SPRETEiJ_G0019768) #10	Ankrd55 (MGP_SPRETEiJ_G0019769) #11	Il6st (MGP_SPRETEiJ_G0019770) #12	Il31ra (MGP_SPRETEiJ_G0019771) #13	Ddx4 (MGP_SPRETEiJ_G0019772) #14	Slc38a9 (MGP_SPRETEiJ_G0019773) #17	Plpp1 (MGP_SPRETEiJ_G0019774) #18	Mtrex (MGP_SPRETEiJ_G0019775) #19	Dhx29 (MGP_SPRETEiJ_G0019776) #20	Ccno (MGP_SPRETEiJ_G0019777) #21	Mcidas (MGP_SPRETEiJ_G0019778) #22	Cdc20b (MGP_SPRETEiJ_G0019779) #23	MGP_SPRETEiJ_G0019780	Gpx8 (MGP_SPRETEiJ_G0019781) #24	Gzmk (MGP_SPRETEiJ_G0019782) #26	Esm1 (MGP_SPRETEiJ_G0019783) #27	Cspg4b (MGP_SPRETEiJ_G0019784)	Snx18 (MGP_SPRETEiJ_G0019785) #28	Hspb3 (MGP_SPRETEiJ_G0019786) #29	Arl15 (MGP_SPRETEiJ_G0019787) #30	Ndufs4 (MGP_SPRETEiJ_G0019788) #31	Fst (MGP_SPRETEiJ_G0019789) #32	Mocs2 (MGP_SPRETEiJ_G0019790) #33	Itga2 (MGP_SPRETEiJ_G0019791) #34	MGP_SPRETEiJ_G0019792 #35	Pelo (MGP_SPRETEiJ_G0019793) #36
Ryukyu mouse	MODERN SPECIES	4	Plk2 (MGP_CAROLIEiJ_G0018884)	Actbl2 (MGP_CAROLIEiJ_G0018885)	Gpbp1 (MGP_CAROLIEiJ_G0018886) #7	MGP_CAROLIEiJ_G0018887	Mier3 (MGP_CAROLIEiJ_G0018888) #8	Map3k1 (MGP_CAROLIEiJ_G0018889) #10	Ankrd55 (MGP_CAROLIEiJ_G0018890) #11	Il6st (MGP_CAROLIEiJ_G0018891) #12	Il31ra (MGP_CAROLIEiJ_G0018892) #13	Ddx4 (MGP_CAROLIEiJ_G0018893) #14	Slc38a9 (MGP_CAROLIEiJ_G0018894) #17	Plpp1 (MGP_CAROLIEiJ_G0018895) #18	Mtrex (MGP_CAROLIEiJ_G0018896) #19	Dhx29 (MGP_CAROLIEiJ_G0018897) #20	Ccno (MGP_CAROLIEiJ_G0018898) #21	Mcidas (MGP_CAROLIEiJ_G0018899) #22	Cdc20b (MGP_CAROLIEiJ_G0018900) #23	MGP_CAROLIEiJ_G0018901	Gpx8 (MGP_CAROLIEiJ_G0018902) #24	MGP_CAROLIEiJ_G0018903 #25	Gzmk (MGP_CAROLIEiJ_G0018904) #26	Esm1 (MGP_CAROLIEiJ_G0018905) #27	Cspg4b (MGP_CAROLIEiJ_G0018906)	MGP_CAROLIEiJ_G0018907 #28	Hspb3 (MGP_CAROLIEiJ_G0018908) #29	Arl15 (MGP_CAROLIEiJ_G0018909) #30	Ndufs4 (MGP_CAROLIEiJ_G0018910) #31	Fst (MGP_CAROLIEiJ_G0018911) #32	Mocs2 (MGP_CAROLIEiJ_G0018912) #33	Itga2 (MGP_CAROLIEiJ_G0018913) #34	Itga1 (MGP_CAROLIEiJ_G0018914) #35
Shrew mouse	MODERN SPECIES	2	Plk2 (MGP_PahariEiJ_G0015955)	Actbl2 (MGP_PahariEiJ_G0015956)	Gpbp1 (MGP_PahariEiJ_G0015957) #7	MGP_PahariEiJ_G0015958	Mier3 (MGP_PahariEiJ_G0015959) #8	Map3k1 (MGP_PahariEiJ_G0015960) #10	Ankrd55 (MGP_PahariEiJ_G0015961) #11	MGP_PahariEiJ_G0015962	Il31ra (MGP_PahariEiJ_G0015963) #13	Ddx4 (MGP_PahariEiJ_G0015964) #14	Slc38a9 (MGP_PahariEiJ_G0015965) #17	Plpp1 (MGP_PahariEiJ_G0015966) #18	Mtrex (MGP_PahariEiJ_G0015967) #19	Dhx29 (MGP_PahariEiJ_G0015968) #20	Ccno (MGP_PahariEiJ_G0015969) #21	Mcidas (MGP_PahariEiJ_G0015970) #22	Cdc20b (MGP_PahariEiJ_G0015971) #23	MGP_PahariEiJ_G0015972	Gpx8 (MGP_PahariEiJ_G0015973) #24	Gzmk (MGP_PahariEiJ_G0015974) #26	Esm1 (MGP_PahariEiJ_G0015975) #27	Cspg4b (MGP_PahariEiJ_G0015976)	Snx18 (MGP_PahariEiJ_G0015977) #28	Hspb3 (MGP_PahariEiJ_G0015978) #29	Arl15 (MGP_PahariEiJ_G0015979) #30	Ndufs4 (MGP_PahariEiJ_G0015980) #31	Fst (MGP_PahariEiJ_G0015981) #32	Mocs2 (MGP_PahariEiJ_G0015982) #33	Itga2 (MGP_PahariEiJ_G0015983) #34	Itga1 (MGP_PahariEiJ_G0015984) #35	Pelo (MGP_PahariEiJ_G0015985) #36
Rat	MODERN SPECIES	11	RGD1560402 (ENSRNOG00000026928)	Actbl2 (ENSRNOG00000043292)	Gpbp1 (ENSRNOG00000013002) #7	Mier3 (ENSRNOG00000013121) #8	Sub1 (ENSRNOG00000050563)	Map3k1 (ENSRNOG00000013177) #10	Ankrd55 (ENSRNOG00000013555) #11	Il6st (ENSRNOG00000013963) #12	Il31ra (ENSRNOG00000042080) #13	Ddx4 (ENSRNOG00000026686) #14	Slc38a9 (ENSRNOG00000009851) #17	Plpp1 (ENSRNOG00000009980) #18	Mtrex (ENSRNOG00000010125) #19	Dhx29 (ENSRNOG00000010369) #20	Ccno (ENSRNOG00000010454) #21	Mcidas (ENSRNOG00000039588) #22	Gpx8 (ENSRNOG00000010461) #24	Gzma (ENSRNOG00000010603) #25	Gzmk (ENSRNOG00000010661) #26	Esm1 (ENSRNOG00000010797) #27	Cspg4b (ENSRNOG00000039582)	Snx18 (ENSRNOG00000010971) #28	Hspb3 (ENSRNOG00000010992) #29	LOC100359700 (ENSRNOG00000067576)	ENSRNOG00000066826	Arl15 (ENSRNOG00000068448) #30	Ndufs4 (ENSRNOG00000011383) #31	Fst (ENSRNOG00000011631) #32	Mocs2 (ENSRNOG00000056325) #33	Itga2 (ENSRNOG00000058111) #34	Itga1 (ENSRNOG00000053550) #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	1104		Gpbp1 (ENSNGAG00000013481) #7	ENSNGAG00000001623	Mier3 (ENSNGAG00000005883) #8	ENSNGAG00000014309 #9	Map3k1 (ENSNGAG00000021146) #10	ENSNGAG00000020926 #11	Il6st (ENSNGAG00000002301) #12	Il31ra (ENSNGAG00000001498) #13	Ddx4 (ENSNGAG00000013259) #14	Slc38a9 (ENSNGAG00000001933) #17	Plpp1 (ENSNGAG00000021095) #18	Mtrex (ENSNGAG00000011938) #19	Dhx29 (ENSNGAG00000018322) #20	Ccno (ENSNGAG00000008766) #21	Mcidas (ENSNGAG00000020437) #22	ENSNGAG00000021161	Cdc20b (ENSNGAG00000020923) #23	Gpx8 (ENSNGAG00000019883) #24	Gzma (ENSNGAG00000020331) #25	Esm1 (ENSNGAG00000021087) #27	ENSNGAG00000022456	Snx18 (ENSNGAG00000011972) #28
Lesser Egyptian jerboa	MODERN SPECIES	115	Actbl2 (ENSJJAG00000014745)	Gpbp1 (ENSJJAG00000006354) #7	Mier3 (ENSJJAG00000009889) #8	ENSJJAG00000011528 #9	Map3k1 (ENSJJAG00000013490) #10	Ankrd55 (ENSJJAG00000016938) #11	Il6st (ENSJJAG00000013997) #12	Il31ra (ENSJJAG00000014278) #13	Ddx4 (ENSJJAG00000015867) #14	Slc38a9 (ENSJJAG00000019191) #17	Plpp1 (ENSJJAG00000020140) #18	Mtrex (ENSJJAG00000020975) #19	Dhx29 (ENSJJAG00000024034) #20	ENSJJAG00000019260	Ccno (ENSJJAG00000019572) #21	Mcidas (ENSJJAG00000023811) #22	Gpx8 (ENSJJAG00000023966) #24	Gzmk (ENSJJAG00000024241) #26	Esm1 (ENSJJAG00000000510) #27	ENSJJAG00000002712	Snx18 (ENSJJAG00000007684) #28	Hspb3 (ENSJJAG00000014004) #29	Arl15 (ENSJJAG00000012052) #30	Ndufs4 (ENSJJAG00000013703) #31	Fst (ENSJJAG00000014889) #32	ENSJJAG00000015304	Itga2 (ENSJJAG00000018880) #34	Itga1 (ENSJJAG00000021426) #35	Pelo (ENSJJAG00000015032) #36	Isl1 (ENSJJAG00000016415) #37	ENSJJAG00000017685
Kangaroo rat	MODERN SPECIES	360			Gpbp1 (ENSDORG00000006390) #7	Mier3 (ENSDORG00000009065) #8	ENSDORG00000009063 #9	Map3k1 (ENSDORG00000009060) #10	Ankrd55 (ENSDORG00000013232) #11	Il6st (ENSDORG00000001454) #12	Il31ra (ENSDORG00000001445) #13	Ddx4 (ENSDORG00000012201) #14	Slc38a9 (ENSDORG00000006129) #17	Plpp1 (ENSDORG00000006787) #18	Mtrex (ENSDORG00000006782) #19	Dhx29 (ENSDORG00000006778) #20	Ccno (ENSDORG00000006777) #21	Mcidas (ENSDORG00000029640) #22	Cdc20b (ENSDORG00000007992) #23	Gpx8 (ENSDORG00000007995) #24	Gzma (ENSDORG00000007482) #25	Gzmk (ENSDORG00000012851) #26	Esm1 (ENSDORG00000024808) #27	ENSDORG00000025199	Hspb3 (ENSDORG00000003165) #29	Arl15 (ENSDORG00000001836) #30	Ndufs4 (ENSDORG00000002429) #31	Fst (ENSDORG00000002373) #32	Mocs2 (ENSDORG00000001600) #33	Itga2 (ENSDORG00000001595) #34	Itga1 (ENSDORG00000016688) #35	Pelo (ENSDORG00000016689) #36	Isl1 (ENSDORG00000016645) #37
Lagomorpha	ANCESTRAL SPECIES	28	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00390000016326 #36
Rabbit	MODERN SPECIES	2	MIER3 (ENSOCUG00000003134) #8	SETD9 (ENSOCUG00000003131) #9	MAP3K1 (ENSOCUG00000009155) #10	ENSOCUG00000025862	ANKRD55 (ENSOCUG00000022079) #11	IL6ST (ENSOCUG00000007839) #12	IL31RA (ENSOCUG00000007830) #13	ENSOCUG00000032940	ENSOCUG00000029858	DDX4 (ENSOCUG00000008597) #14	SLC38A9 (ENSOCUG00000004479) #17	PLPP1 (ENSOCUG00000004472) #18	MTREX (ENSOCUG00000004463) #19	DHX29 (ENSOCUG00000004454) #20	CCNO (ENSOCUG00000006413) #21	MCIDAS (ENSOCUG00000026885) #22	GPX8 (ENSOCUG00000015267) #24	CDC20B (ENSOCUG00000015246) #23	ENSOCUG00000015236 #25	ENSOCUG00000026674	GZMK (ENSOCUG00000008873) #26	ESM1 (ENSOCUG00000011604) #27	ENSOCUG00000027987	ENSOCUG00000034064	ENSOCUG00000025549	SNX18 (ENSOCUG00000009831) #28	HSPB3 (ENSOCUG00000024729) #29	ARL15 (ENSOCUG00000008448) #30	NDUFS4 (ENSOCUG00000000790) #31	FST (ENSOCUG00000004687) #32	ENSOCUG00000011406 #33
Primates	ANCESTRAL SPECIES	8	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Lemuriformes	ANCESTRAL SPECIES	37	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Lemuriformes_a	ANCESTRAL SPECIES	105	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Coquerels sifaka	MODERN SPECIES	622		ACTBL2 (ENSPCOG00000009038)	GPBP1 (ENSPCOG00000022403) #7	MIER3 (ENSPCOG00000006690) #8	SETD9 (ENSPCOG00000018057) #9	MAP3K1 (ENSPCOG00000016534) #10	ENSPCOG00000017057	ENSPCOG00000009130 #11	IL6ST (ENSPCOG00000017494) #12	IL31RA (ENSPCOG00000025169) #13	SLC38A9 (ENSPCOG00000017545) #17	PLPP1 (ENSPCOG00000015324) #18	MTREX (ENSPCOG00000018092) #19	DHX29 (ENSPCOG00000021937) #20	CCNO (ENSPCOG00000019372) #21	MCIDAS (ENSPCOG00000014916) #22	GPX8 (ENSPCOG00000022987) #24	CDC20B (ENSPCOG00000018503) #23	GZMA (ENSPCOG00000020570) #25	GZMK (ENSPCOG00000016960) #26	ESM1 (ENSPCOG00000022229) #27	SNX18 (ENSPCOG00000022470) #28	ARL15 (ENSPCOG00000015650) #30	ENSPCOG00000018244	NDUFS4 (ENSPCOG00000004473) #31	FST (ENSPCOG00000014569) #32	MOCS2 (ENSPCOG00000025989) #33	ITGA2 (ENSPCOG00000025975) #34	PELO (ENSPCOG00000021178) #36	ITGA1 (ENSPCOG00000013155) #35	ENSPCOG00000026002
Greater bamboo lemur	MODERN SPECIES	1193	ACTBL2 (ENSPSMG00000015672)	GPBP1 (ENSPSMG00000015739) #7	ENSPSMG00000015767	MIER3 (ENSPSMG00000015797) #8	SETD9 (ENSPSMG00000015850) #9	MAP3K1 (ENSPSMG00000015876) #10	ANKRD55 (ENSPSMG00000015915) #11	IL6ST (ENSPSMG00000016142) #12	IL31RA (ENSPSMG00000016299) #13	DDX4 (ENSPSMG00000016498) #14	SLC38A9 (ENSPSMG00000016581) #17	PLPP1 (ENSPSMG00000016648) #18	MTREX (ENSPSMG00000016700) #19	DHX29 (ENSPSMG00000016779) #20	CCNO (ENSPSMG00000016815) #21	MCIDAS (ENSPSMG00000016821) #22	CDC20B (ENSPSMG00000016849) #23	GPX8 (ENSPSMG00000016860) #24	GZMA (ENSPSMG00000016865) #25	GZMK (ENSPSMG00000016872) #26	ESM1 (ENSPSMG00000016886) #27	ENSPSMG00000016896	SNX18 (ENSPSMG00000016910) #28	HSPB3 (ENSPSMG00000016921) #29
Mouse lemur	MODERN SPECIES	3	ENSMICG00000014678 #7	MIER3 (ENSMICG00000032965) #8	SETD9 (ENSMICG00000000429) #9	MAP3K1 (ENSMICG00000000427) #10	ENSMICG00000011549 #11	IL6ST (ENSMICG00000011533) #12	IL31RA (ENSMICG00000011557) #13	ENSMICG00000041548	ENSMICG00000029795	ENSMICG00000008994 #14	SLC38A9 (ENSMICG00000012849) #17	PLPP1 (ENSMICG00000044869) #18	MTREX (ENSMICG00000012779) #19	DHX29 (ENSMICG00000012740) #20	CCNO (ENSMICG00000012726) #21	MCIDAS (ENSMICG00000033324) #22	GPX8 (ENSMICG00000037805) #24	CDC20B (ENSMICG00000012704) #23	GZMA (ENSMICG00000012698) #25	GZMK (ENSMICG00000031808) #26	ESM1 (ENSMICG00000011973) #27	ENSMICG00000026874	ENSMICG00000003500 #28	ENSMICG00000033364 #30	NDUFS4 (ENSMICG00000041801) #31	FST (ENSMICG00000028545) #32	MOCS2 (ENSMICG00000004714) #33	ITGA2 (ENSMICG00000004699) #34	PELO (ENSMICG00000044040) #36	ITGA1 (ENSMICG00000004683) #35	ISL1 (ENSMICG00000001868) #37
Bushbaby	MODERN SPECIES	120	MIER3 (ENSOGAG00000002702) #8	SETD9 (ENSOGAG00000002699) #9	MAP3K1 (ENSOGAG00000002694) #10	ENSOGAG00000031677	ENSOGAG00000034660	ANKRD55 (ENSOGAG00000007609) #11	IL6ST (ENSOGAG00000007603) #12	IL31RA (ENSOGAG00000007597) #13	DDX4 (ENSOGAG00000007588) #14	SLC38A9 (ENSOGAG00000007583) #17	ENSOGAG00000030919	PLPP1 (ENSOGAG00000002887) #18	MTREX (ENSOGAG00000002886) #19	DHX29 (ENSOGAG00000002880) #20	CCNO (ENSOGAG00000007131) #21	MCIDAS (ENSOGAG00000034851) #22	GPX8 (ENSOGAG00000007129) #24	CDC20B (ENSOGAG00000007120) #23	GZMA (ENSOGAG00000007119) #25	GZMK (ENSOGAG00000007116) #26	ESM1 (ENSOGAG00000026369) #27	ENSOGAG00000026791	ENSOGAG00000031260	ENSOGAG00000028955	SNX18 (ENSOGAG00000028588) #28	HSPB3 (ENSOGAG00000000802) #29	ENSOGAG00000033282	ARL15 (ENSOGAG00000016980) #30	FST (ENSOGAG00000002121) #32	MOCS2 (ENSOGAG00000011108) #33	ITGA2 (ENSOGAG00000006905) #34
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Tarsier	MODERN SPECIES	5821						IL31RA (ENSTSYG00000012097) #13	ENSTSYG00000032242	DDX4 (ENSTSYG00000011848) #14	SLC38A9 (ENSTSYG00000013023) #17	ENSTSYG00000026368	PLPP1 (ENSTSYG00000007409) #18	MTREX (ENSTSYG00000007389) #19	ENSTSYG00000035878	DHX29 (ENSTSYG00000003651) #20	CCNO (ENSTSYG00000031767) #21	MCIDAS (ENSTSYG00000027244) #22	GPX8 (ENSTSYG00000012413) #24	CDC20B (ENSTSYG00000012407) #23	GZMA (ENSTSYG00000012394) #25	GZMK (ENSTSYG00000003824) #26	ESM1 (ENSTSYG00000033793) #27
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a.a #37
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a.a #37
Marmoset	MODERN SPECIES	11	ANKRD55 (ENSCJAG00000002120) #11	ENSCJAG00000070211	ENSCJAG00000075763	ENSCJAG00000051749	IL6ST (ENSCJAG00000002068) #12	IL31RA (ENSCJAG00000002043) #13	ENSCJAG00000086167	ENSCJAG00000084118	DDX4 (ENSCJAG00000001951) #14	ENSCJAG00000072615	SLC38A9 (ENSCJAG00000001907) #17	PLPP1 (ENSCJAG00000001879) #18	MTREX (ENSCJAG00000001773) #19	DHX29 (ENSCJAG00000001692) #20	CCNO (ENSCJAG00000001680) #21	MCIDAS (ENSCJAG00000001678) #22	ENSCJAG00000082354	CDC20B (ENSCJAG00000001654) #23	GPX8 (ENSCJAG00000052197) #24	GZMA (ENSCJAG00000001650) #25	GZMK (ENSCJAG00000001646) #26	ESM1 (ENSCJAG00000064617) #27	ENSCJAG00000078596	ENSCJAG00000074646	ENSCJAG00000052777	SNX18 (ENSCJAG00000001635) #28	HSPB3 (ENSCJAG00000021806) #29	ARL15 (ENSCJAG00000042706) #30	NDUFS4 (ENSCJAG00000001607) #31	FST (ENSCJAG00000001590) #32	MOCS2 (ENSCJAG00000001568) #33
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000012691.c.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Bolivian squirrel monkey	MODERN SPECIES	57	ACTBL2 (ENSSBOG00000013271)	GPBP1 (ENSSBOG00000027213) #7	MIER3 (ENSSBOG00000027030) #8	SETD9 (ENSSBOG00000023839) #9	MAP3K1 (ENSSBOG00000025580) #10	ENSSBOG00000027187	ANKRD55 (ENSSBOG00000026754) #11	IL6ST (ENSSBOG00000033826) #12	IL31RA (ENSSBOG00000034457) #13	DDX4 (ENSSBOG00000035231) #14	SLC38A9 (ENSSBOG00000026976) #17	PLPP1 (ENSSBOG00000021185) #18	MTREX (ENSSBOG00000026693) #19	DHX29 (ENSSBOG00000026450) #20	CCNO (ENSSBOG00000024858) #21	MCIDAS (ENSSBOG00000027678) #22	CDC20B (ENSSBOG00000021532) #23	GPX8 (ENSSBOG00000033612) #24	GZMA (ENSSBOG00000031268) #25	ENSSBOG00000032720	GZMK (ENSSBOG00000023762) #26	ESM1 (ENSSBOG00000026605) #27	SNX18 (ENSSBOG00000021385) #28	HSPB3 (ENSSBOG00000019511) #29	ARL15 (ENSSBOG00000031209) #30	ENSSBOG00000035211	ENSSBOG00000035792	NDUFS4 (ENSSBOG00000014595) #31	ENSSBOG00000020828	FST (ENSSBOG00000024064) #32	ENSSBOG00000012144
Capuchin	MODERN SPECIES	213	MAP3K1 (ENSCCAG00000017106) #10	ENSCCAG00000033534	ENSCCAG00000029755	ANKRD55 (ENSCCAG00000004168) #11	IL6ST (ENSCCAG00000007359) #12	IL31RA (ENSCCAG00000028273) #13	ENSCCAG00000036548	DDX4 (ENSCCAG00000028725) #14	ENSCCAG00000000304	SLC38A9 (ENSCCAG00000007742) #17	ENSCCAG00000021204	PLPP1 (ENSCCAG00000036760) #18	MTREX (ENSCCAG00000014177) #19	DHX29 (ENSCCAG00000026726) #20	CCNO (ENSCCAG00000032201) #21	MCIDAS (ENSCCAG00000024349) #22	GPX8 (ENSCCAG00000029932) #24	CDC20B (ENSCCAG00000034841) #23	GZMA (ENSCCAG00000000575) #25
Mas night monkey	MODERN SPECIES	454	MIER3 (ENSANAG00000020585) #8	SETD9 (ENSANAG00000034009) #9	MAP3K1 (ENSANAG00000027994) #10	ENSANAG00000033167	ENSANAG00000012283	ANKRD55 (ENSANAG00000036712) #11	ENSANAG00000029312	IL6ST (ENSANAG00000021125) #12	IL31RA (ENSANAG00000024402) #13	DDX4 (ENSANAG00000029060) #14	SLC38A9 (ENSANAG00000025892) #17	PLPP1 (ENSANAG00000038436) #18	MTREX (ENSANAG00000023095) #19	DHX29 (ENSANAG00000005482) #20	CCNO (ENSANAG00000037719) #21	MCIDAS (ENSANAG00000018714) #22	ENSANAG00000037541	CDC20B (ENSANAG00000021252) #23	GPX8 (ENSANAG00000037233) #24	GZMA (ENSANAG00000019557) #25
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Hominidae	ANCESTRAL SPECIES	7	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Pan	ANCESTRAL SPECIES	21	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000158194.d	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00940000164207.h	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Chimpanzee	MODERN SPECIES	18	ENSPTRG00000047789	ANKRD55 (ENSPTRG00000016888) #11	ENSPTRG00000018925	IL6ST (ENSPTRG00000016887) #12	IL31RA (ENSPTRG00000016886) #13	ENSPTRG00000048965	ENSPTRG00000047738	DDX4 (ENSPTRG00000016884) #14	SLC38A9 (ENSPTRG00000016883) #17	ENSPTRG00000047963	PLPP1 (ENSPTRG00000016880) #18	ENSPTRG00000041703	MTREX (ENSPTRG00000016878) #19	DHX29 (ENSPTRG00000016875) #20	CCNO (ENSPTRG00000016874) #21	MCIDAS (ENSPTRG00000040660) #22	CDC20B (ENSPTRG00000016872) #23	GPX8 (ENSPTRG00000016873) #24	GZMA (ENSPTRG00000016871) #25	GZMK (ENSPTRG00000016870) #26	ESM1 (ENSPTRG00000016869) #27	ENSPTRG00000049136	SNX18 (ENSPTRG00000016868) #28	HSPB3 (ENSPTRG00000016867) #29	ARL15 (ENSPTRG00000016866) #30	ENSPTRG00000047028	NDUFS4 (ENSPTRG00000016864) #31	FST (ENSPTRG00000016863) #32	ENSPTRG00000048083	MOCS2 (ENSPTRG00000016862) #33	ITGA2 (ENSPTRG00000016860) #34
Bonobo	MODERN SPECIES	18	MAP3K1 (ENSPPAG00000036823) #10	ANKRD55 (ENSPPAG00000043099) #11	ENSPPAG00000030322	IL6ST (ENSPPAG00000019428) #12	IL31RA (ENSPPAG00000031467) #13	ENSPPAG00000037145	ENSPPAG00000029811	DDX4 (ENSPPAG00000033915) #14	SLC38A9 (ENSPPAG00000032086) #17	ENSPPAG00000032097	ENSPPAG00000039501	PLPP1 (ENSPPAG00000041332) #18	MTREX (ENSPPAG00000039291) #19	DHX29 (ENSPPAG00000041713) #20	CCNO (ENSPPAG00000027960) #21	MCIDAS (ENSPPAG00000034025) #22	CDC20B (ENSPPAG00000040090) #23	GPX8 (ENSPPAG00000035163) #24	GZMA (ENSPPAG00000011827) #25	GZMK (ENSPPAG00000027302) #26	ESM1 (ENSPPAG00000027788) #27	ENSPPAG00000031233	SNX18 (ENSPPAG00000034027) #28	HSPB3 (ENSPPAG00000014568) #29	ARL15 (ENSPPAG00000038417) #30	ENSPPAG00000042317	NDUFS4 (ENSPPAG00000031693) #31	ENSPPAG00000026546 #32	ENSPPAG00000031505	MOCS2 (ENSPPAG00000034014) #33	ITGA2 (ENSPPAG00000044028) #34
Human	MODERN SPECIES	17	PLK2 (ENSG00000145632)	ACTBL2 (ENSG00000169067)	GPBP1 (ENSG00000062194) #7	MIER3 (ENSG00000155545) #8	SETD9 (ENSG00000155542) #9	MAP3K1 (ENSG00000095015) #10	ANKRD55 (ENSG00000164512) #11	IL6ST (ENSG00000134352) #12	IL31RA (ENSG00000164509) #13	DDX4 (ENSG00000152670) #14	SLC38A9 (ENSG00000177058) #17	PLPP1 (ENSG00000067113) #18	MTREX (ENSG00000039123) #19	DHX29 (ENSG00000067248) #20	CCNO (ENSG00000152669) #21	MCIDAS (ENSG00000234602) #22	GPX8 (ENSG00000164294) #24	CDC20B (ENSG00000164287) #23	GZMA (ENSG00000145649) #25	GZMK (ENSG00000113088) #26	ESM1 (ENSG00000164283) #27	SNX18 (ENSG00000178996) #28	HSPB3 (ENSG00000169271) #29	ARL15 (ENSG00000185305) #30	NDUFS4 (ENSG00000164258) #31	FST (ENSG00000134363) #32	MOCS2 (ENSG00000164172) #33	ITGA2 (ENSG00000164171) #34	ITGA1 (ENSG00000213949) #35	PELO (ENSG00000152684) #36	ISL1 (ENSG00000016082) #37
Gorilla	MODERN SPECIES	8	C5orf67 (ENSGGOG00000024041)	ENSGGOG00000037848	ANKRD55 (ENSGGOG00000016033) #11	ENSGGOG00000006588	ENSGGOG00000003727 #12	IL31RA (ENSGGOG00000002985) #13	ENSGGOG00000040613	DDX4 (ENSGGOG00000002439) #14	SLC38A9 (ENSGGOG00000013482) #17	ENSGGOG00000001103	PLPP1 (ENSGGOG00000001872) #18	ENSGGOG00000000661	MTREX (ENSGGOG00000001867) #19	DHX29 (ENSGGOG00000001862) #20	CCNO (ENSGGOG00000009166) #21	MCIDAS (ENSGGOG00000026647) #22	CDC20B (ENSGGOG00000025526) #23	GPX8 (ENSGGOG00000012680) #24	GZMA (ENSGGOG00000017031) #25	GZMK (ENSGGOG00000026032) #26	ESM1 (ENSGGOG00000008658) #27	ENSGGOG00000026474	ENSGGOG00000042382 #28	HSPB3 (ENSGGOG00000006205) #29	ARL15 (ENSGGOG00000012436) #30	ENSGGOG00000023473	NDUFS4 (ENSGGOG00000001243) #31	FST (ENSGGOG00000002978) #32	MOCS2 (ENSGGOG00000001290) #33	ITGA2 (ENSGGOG00000001285) #34	ITGA1 (ENSGGOG00000022320) #35
Orangutan	MODERN SPECIES	18	PLK2 (ENSPPYG00000015483)	ACTBL2 (ENSPPYG00000015482)	GPBP1 (ENSPPYG00000015481) #7	MIER3 (ENSPPYG00000015480) #8	SETD9 (ENSPPYG00000015479) #9	MAP3K1 (ENSPPYG00000015478) #10	ANKRD55 (ENSPPYG00000015476) #11	IL6ST (ENSPPYG00000015475) #12	IL31RA (ENSPPYG00000015473) #13	DDX4 (ENSPPYG00000015472) #14	SLC38A9 (ENSPPYG00000015471) #17	PLPP1 (ENSPPYG00000015470) #18	MTREX (ENSPPYG00000015469) #19	DHX29 (ENSPPYG00000015468) #20	ENSPPYG00000035186 #21	MCIDAS (ENSPPYG00000040237) #22	ENSPPYG00000033724 #24	CDC20B (ENSPPYG00000015466) #23	GZMA (ENSPPYG00000015465) #25	GZMK (ENSPPYG00000015464) #26	ESM1 (ENSPPYG00000037791) #27	SNX18 (ENSPPYG00000015460) #28	ARL15 (ENSPPYG00000015457) #30	NDUFS4 (ENSPPYG00000015455) #31	FST (ENSPPYG00000015454) #32	MOCS2 (ENSPPYG00000015453) #33	ITGA2 (ENSPPYG00000015452) #34	PELO (ENSPPYG00000015451) #36	ITGA1 (ENSPPYG00000015450) #35	ISL1 (ENSPPYG00000015449) #37	ENSPPYG00000035805
Gibbon	MODERN SPECIES	8	ENSNLEG00000031541	ENSNLEG00000035446	ANKRD55 (ENSNLEG00000002215) #11	IL6ST (ENSNLEG00000002075) #12	IL31RA (ENSNLEG00000001947) #13	ENSNLEG00000033964	ENSNLEG00000033054	DDX4 (ENSNLEG00000001662) #14	SLC38A9 (ENSNLEG00000001529) #17	ENSNLEG00000033338	ENSNLEG00000001526	PLPP1 (ENSNLEG00000001513) #18	MTREX (ENSNLEG00000001494) #19	DHX29 (ENSNLEG00000001232) #20	CCNO (ENSNLEG00000001224) #21	MCIDAS (ENSNLEG00000001216) #22	GPX8 (ENSNLEG00000001206) #24	CDC20B (ENSNLEG00000001187) #23	GZMA (ENSNLEG00000001174) #25	GZMK (ENSNLEG00000001158) #26	ESM1 (ENSNLEG00000001154) #27	NDST4 (ENSNLEG00000016194)	UGT8 (ENSNLEG00000016209)	ARSJ (ENSNLEG00000016215)	CAMK2D (ENSNLEG00000016216)	ANK2 (ENSNLEG00000016262)	ENSNLEG00000033262	LARP7 (ENSNLEG00000016354)	ZGRF1 (ENSNLEG00000016387)	NEUROG2 (ENSNLEG00000031074)	ENSNLEG00000033860
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00950000182908.A #11	ENSGT00940000155000.v	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00390000018086.o.a.a.b.b.b.a.a.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34
Rhinopithecus	ANCESTRAL SPECIES	183	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00390000008631.a.d.b	ENSGT00940000153503.a.a.r	ENSGT00940000157507 #14	ENSGT01090000260115.e.a	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00390000018086.o.a.a.b.b.b.a.a.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b
Golden snub-nosed monkey	MODERN SPECIES	2579		ANKRD55 (ENSRROG00000002431) #11	ENSRROG00000038415	IL6ST (ENSRROG00000040172) #12	IL31RA (ENSRROG00000043638) #13	ENSRROG00000036184	ENSRROG00000040571	DDX4 (ENSRROG00000045392) #14	ENSRROG00000042659	SLC38A9 (ENSRROG00000010881) #17	PLPP1 (ENSRROG00000040017) #18	ENSRROG00000022761	MTREX (ENSRROG00000039895) #19	DHX29 (ENSRROG00000044066) #20	CCNO (ENSRROG00000039368) #21	MCIDAS (ENSRROG00000037437) #22	CDC20B (ENSRROG00000039120) #23	GPX8 (ENSRROG00000040497) #24	GZMA (ENSRROG00000042970) #25	GZMK (ENSRROG00000038560) #26	ESM1 (ENSRROG00000033295) #27	ENSRROG00000043856
Black snub-nosed monkey	MODERN SPECIES	474	ENSRBIG00000039375	ANKRD55 (ENSRBIG00000026624) #11	ENSRBIG00000039163 #12	ENSRBIG00000036601	IL31RA (ENSRBIG00000015386) #13	ENSRBIG00000015941	DDX4 (ENSRBIG00000028795) #14	ENSRBIG00000033979	SLC38A9 (ENSRBIG00000028044) #17	ENSRBIG00000028686	ENSRBIG00000003521	PLPP1 (ENSRBIG00000036266) #18	MTREX (ENSRBIG00000034930) #19	DHX29 (ENSRBIG00000032473) #20	CCNO (ENSRBIG00000044665) #21	MCIDAS (ENSRBIG00000017306) #22	GPX8 (ENSRBIG00000036084) #24	CDC20B (ENSRBIG00000033672) #23	GZMA (ENSRBIG00000044865) #25
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00940000155000.v	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00390000018086.o.a.a.b.b.b.a.a.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34
Vervet Monkey	MODERN SPECIES	23	PLK2 (ENSCSAG00000016152)	GPBP1 (ENSCSAG00000016158) #7	MIER3 (ENSCSAG00000016165) #8	SETD9 (ENSCSAG00000016168) #9	MAP3K1 (ENSCSAG00000016180) #10	ENSCSAG00000016189	ANKRD55 (ENSCSAG00000016206) #11	IL6ST (ENSCSAG00000016226) #12	IL31RA (ENSCSAG00000016243) #13	DDX4 (ENSCSAG00000016336) #14	SLC38A9 (ENSCSAG00000016371) #17	PLPP1 (ENSCSAG00000016379) #18	MTREX (ENSCSAG00000016445) #19	DHX29 (ENSCSAG00000016510) #20	CCNO (ENSCSAG00000016535) #21	MCIDAS (ENSCSAG00000016549) #22	GPX8 (ENSCSAG00000016558) #24	CDC20B (ENSCSAG00000016579) #23	GZMA (ENSCSAG00000016590) #25	GZMK (ENSCSAG00000016596) #26	ESM1 (ENSCSAG00000016603) #27	SNX18 (ENSCSAG00000016605) #28	HSPB3 (ENSCSAG00000019001) #29	ARL15 (ENSCSAG00000016613) #30	ENSCSAG00000016619	NDUFS4 (ENSCSAG00000016625) #31	FST (ENSCSAG00000016631) #32	MOCS2 (ENSCSAG00000016637) #33	ITGA2 (ENSCSAG00000016671) #34	PELO (ENSCSAG00000016692) #36	ITGA1 (ENSCSAG00000016702) #35
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00940000155000.v	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00940000154319.u.b.a.a	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00390000018086.o.a.a.b.b.b.a.a.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00940000154319.u.b.a.a	ENSGT00390000005646 #17	ENSGT00940000154568.q.b	ENSGT00390000018086.o.a.a.b.b.b.a.a.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Pig-tailed macaque	MODERN SPECIES	283	MAP3K1 (ENSMNEG00000039290) #10	ENSMNEG00000038876	ANKRD55 (ENSMNEG00000041799) #11	IL6ST (ENSMNEG00000034978) #12	IL31RA (ENSMNEG00000037032) #13	ENSMNEG00000030544	DDX4 (ENSMNEG00000033343) #14	ENSMNEG00000014372	SLC38A9 (ENSMNEG00000041247) #17	ENSMNEG00000035647	ENSMNEG00000038316	PLPP1 (ENSMNEG00000041812) #18	MTREX (ENSMNEG00000032746) #19	DHX29 (ENSMNEG00000027210) #20	CCNO (ENSMNEG00000031398) #21	MCIDAS (ENSMNEG00000035730) #22	GPX8 (ENSMNEG00000042517) #24	CDC20B (ENSMNEG00000019411) #23	GZMA (ENSMNEG00000037573) #25	GZMK (ENSMNEG00000042303) #26	ESM1 (ENSMNEG00000042537) #27	SNX18 (ENSMNEG00000016588) #28	HSPB3 (ENSMNEG00000007681) #29	ARL15 (ENSMNEG00000040099) #30	ENSMNEG00000029862	NDUFS4 (ENSMNEG00000031455) #31	FST (ENSMNEG00000030087) #32	ENSMNEG00000030592 #33	ITGA2 (ENSMNEG00000044468) #34	PELO (ENSMNEG00000035538) #36	ITGA1 (ENSMNEG00000039760) #35
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00420000029753.a #7	ENSGT00940000155541.C.j	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00940000154319.u.b.a.a	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Rhesus	MODERN SPECIES	16	MAP3K1 (ENSMMUG00000012387) #10	ENSMMUG00000041620	ENSMMUG00000049885	ENSMMUG00000050786	ANKRD55 (ENSMMUG00000009729) #11	IL6ST (ENSMMUG00000001893) #12	IL31RA (ENSMMUG00000017394) #13	DDX4 (ENSMMUG00000017386) #14	SLC38A9 (ENSMMUG00000010466) #17	ENSMMUG00000061973	ENSMMUG00000060908	PLPP1 (ENSMMUG00000030099) #18	MTREX (ENSMMUG00000010379) #19	DHX29 (ENSMMUG00000010376) #20	CCNO (ENSMMUG00000010372) #21	MCIDAS (ENSMMUG00000030102) #22	GPX8 (ENSMMUG00000051451) #24	CDC20B (ENSMMUG00000001600) #23	GZMA (ENSMMUG00000001597) #25	GZMK (ENSMMUG00000020171) #26	ESM1 (ENSMMUG00000020169) #27	CSPG4BP (ENSMMUG00000059591)	SNX18 (ENSMMUG00000023157) #28	HSPB3 (ENSMMUG00000018488) #29	ARL15 (ENSMMUG00000011995) #30	ENSMMUG00000053428	NDUFS4 (ENSMMUG00000004861) #31	FST (ENSMMUG00000004860) #32	MOCS2 (ENSMMUG00000020449) #33	ITGA2 (ENSMMUG00000020448) #34	PELO (ENSMMUG00000039101) #36
Crab-eating macaque	MODERN SPECIES	16	GPBP1 (ENSMFAG00000000066) #7	ENSMFAG00000048112	ENSMFAG00000064383	MIER3 (ENSMFAG00000042794) #8	SETD9 (ENSMFAG00000036063) #9	MAP3K1 (ENSMFAG00000014401) #10	ANKRD55 (ENSMFAG00000031576) #11	IL31RA (ENSMFAG00000031804) #13	DDX4 (ENSMFAG00000040186) #14	ENSMFAG00000045335	SLC38A9 (ENSMFAG00000042280) #17	PLPP1 (ENSMFAG00000030691) #18	MTREX (ENSMFAG00000031610) #19	DHX29 (ENSMFAG00000003740) #20	CCNO (ENSMFAG00000031385) #21	MCIDAS (ENSMFAG00000063476) #22	GPX8 (ENSMFAG00000049212) #24	CDC20B (ENSMFAG00000043474) #23	GZMA (ENSMFAG00000057990) #25	ENSMFAG00000050934	GZMK (ENSMFAG00000033984) #26	ESM1 (ENSMFAG00000045186) #27	ENSMFAG00000060394	ENSMFAG00000047709	HSPB3 (ENSMFAG00000030683) #29	ENSMFAG00000056887	ARL15 (ENSMFAG00000028679) #30	ENSMFAG00000054690	NDUFS4 (ENSMFAG00000033089) #31	FST (ENSMFAG00000030825) #32	MOCS2 (ENSMFAG00000037730) #33
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00940000155000.v	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00940000154319.u.b.a.a	ENSGT00390000005646 #17	ENSGT00390000018086.o.a.a.b.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886.c #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Olive baboon	MODERN SPECIES	15	ENSPANG00000046705	IL31RA (ENSPANG00000018897) #13	ENSPANG00000042973	ENSPANG00000042003	DDX4 (ENSPANG00000010945) #14	ENSPANG00000045081	SLC38A9 (ENSPANG00000004000) #17	ENSPANG00000046125	ENSPANG00000044951	ENSPANG00000050719	ENSPANG00000041241	PLPP1 (ENSPANG00000021430) #18	MTREX (ENSPANG00000009697) #19	DHX29 (ENSPANG00000013603) #20	CCNO (ENSPANG00000007971) #21	MCIDAS (ENSPANG00000006590) #22	ENSPANG00000040598	GPX8 (ENSPANG00000038979) #24	CDC20B (ENSPANG00000011301) #23	GZMA (ENSPANG00000013604) #25	ENSPANG00000049490	ENSPANG00000029782	GZMK (ENSPANG00000008457) #26	ESM1 (ENSPANG00000016712) #27	SNX18 (ENSPANG00000013387) #28	HSPB3 (ENSPANG00000014063) #29	ENSPANG00000051304	ARL15 (ENSPANG00000001779) #30	NDUFS4 (ENSPANG00000041545) #31	FST (ENSPANG00000023915) #32	MOCS2 (ENSPANG00000024798) #33
Cercopithecinae_d	ANCESTRAL SPECIES	114	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00520000060104	ENSGT01020000230346.C.c.a.a.a.b	ENSGT00940000155000.v	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00390000018086.o.a.a.b.a	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886.c #26	ENSGT00390000018810 #27	ENSGT00940000162984.b.b	ENSGT00940000154091.b	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000004524.c.a.a.a.a.b	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669.i #33	ENSGT00940000156303 #34
Sooty mangabey	MODERN SPECIES	604															ENSCATG00000003651 #21	MCIDAS (ENSCATG00000023244) #22	CDC20B (ENSCATG00000029321) #23	GPX8 (ENSCATG00000014555) #24	GZMA (ENSCATG00000036876) #25	GZMK (ENSCATG00000029444) #26
Drill	MODERN SPECIES	1218					IL6ST (ENSMLEG00000034857) #12	IL31RA (ENSMLEG00000026602) #13	ENSMLEG00000027448	DDX4 (ENSMLEG00000038233) #14	ENSMLEG00000039509	SLC38A9 (ENSMLEG00000034584) #17	PLPP1 (ENSMLEG00000029478) #18	ENSMLEG00000024622	MTREX (ENSMLEG00000041051) #19	DHX29 (ENSMLEG00000032837) #20	CCNO (ENSMLEG00000036886) #21	MCIDAS (ENSMLEG00000033943) #22	GPX8 (ENSMLEG00000034464) #24	CDC20B (ENSMLEG00000038674) #23	GZMA (ENSMLEG00000040793) #25	CCNA2 (ENSMLEG00000041387)	EXOSC9 (ENSMLEG00000042316)	ENSMLEG00000036961	ANXA5 (ENSMLEG00000001710)	ENSMLEG00000000209	QRFPR (ENSMLEG00000034740)	TNIP3 (ENSMLEG00000029119)	NDNF (ENSMLEG00000040140)	PRDM5 (ENSMLEG00000023145)
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Suina	ANCESTRAL SPECIES	25	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Chacoan peccary	MODERN SPECIES	98	PLK2 (ENSCWAG00000003584)	ACTBL2 (ENSCWAG00000003609)	GPBP1 (ENSCWAG00000003618) #7	MIER3 (ENSCWAG00000003642) #8	SETD9 (ENSCWAG00000003704) #9	MAP3K1 (ENSCWAG00000003748) #10	ANKRD55 (ENSCWAG00000003831) #11	IL6ST (ENSCWAG00000004021) #12	IL31RA (ENSCWAG00000000020) #13	DDX4 (ENSCWAG00000000161) #14	SLC38A9 (ENSCWAG00000000430) #17	PLPP1 (ENSCWAG00000000526) #18	MTREX (ENSCWAG00000000555) #19	DHX29 (ENSCWAG00000000659) #20	CCNO (ENSCWAG00000000746) #21	MCIDAS (ENSCWAG00000000761) #22	CDC20B (ENSCWAG00000000806) #23	GPX8 (ENSCWAG00000000975) #24	ENSCWAG00000000992	GZMA (ENSCWAG00000001001) #25	ENSCWAG00000001020	GZMK (ENSCWAG00000001047) #26	ESM1 (ENSCWAG00000001069) #27	ENSCWAG00000001089	SNX18 (ENSCWAG00000001101) #28	HSPB3 (ENSCWAG00000001117) #29	ARL15 (ENSCWAG00000001125) #30	ENSCWAG00000001138	ENSCWAG00000001155 #31	ENSCWAG00000001173	FST (ENSCWAG00000001191) #32
Pig	MODERN SPECIES	7	MIER3 (ENSSSCG00000016920) #8	SETD9 (ENSSSCG00000016919) #9	MAP3K1 (ENSSSCG00000016918) #10	ENSSSCG00000038692	ANKRD55 (ENSSSCG00000016917) #11	IL6ST (ENSSSCG00000016916) #12	IL31RA (ENSSSCG00000016915) #13	DDX4 (ENSSSCG00000016913) #14	SLC38A9 (ENSSSCG00000030343) #17	ENSSSCG00000047477	PLPP1 (ENSSSCG00000016912) #18	ENSSSCG00000062846	MTREX (ENSSSCG00000016911) #19	DHX29 (ENSSSCG00000016907) #20	CCNO (ENSSSCG00000026849) #21	MCIDAS (ENSSSCG00000036183) #22	GPX8 (ENSSSCG00000021973) #24	CDC20B (ENSSSCG00000048484) #23	GZMA (ENSSSCG00000016903) #25	GZMA (ENSSSCG00000016902)	GZMK (ENSSSCG00000016901) #26	ESM1 (ENSSSCG00000016900) #27	ENSSSCG00000016898	ENSSSCG00000056604	SNX18 (ENSSSCG00000031337) #28	HSPB3 (ENSSSCG00000036059) #29	ARL15 (ENSSSCG00000016894) #30	ENSSSCG00000041656	NDUFS4 (ENSSSCG00000016893) #31	FST (ENSSSCG00000016892) #32	MOCS2 (ENSSSCG00000016888) #33
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Camelidae	ANCESTRAL SPECIES	1	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Arabian camel	MODERN SPECIES	22	PLK2 (ENSCDRG00005005540)	ACTBL2 (ENSCDRG00005005638)	GPBP1 (ENSCDRG00005005650) #7	MIER3 (ENSCDRG00005005727) #8	SETD9 (ENSCDRG00005005837) #9	MAP3K1 (ENSCDRG00005005939) #10	ANKRD55 (ENSCDRG00005006260) #11	IL6ST (ENSCDRG00005006461) #12	IL31RA (ENSCDRG00005006643) #13	DDX4 (ENSCDRG00005006799) #14	SLC38A9 (ENSCDRG00005008293) #17	PLPP1 (ENSCDRG00005008478) #18	MTREX (ENSCDRG00005008649) #19	DHX29 (ENSCDRG00005008793) #20	CCNO (ENSCDRG00005009386) #21	MCIDAS (ENSCDRG00005009437) #22	CDC20B (ENSCDRG00005009553) #23	GPX8 (ENSCDRG00005010172) #24	GZMA (ENSCDRG00005010264) #25	ENSCDRG00005010328	GZMK (ENSCDRG00005010472) #26	ESM1 (ENSCDRG00005010518) #27	ENSCDRG00005010562	SNX18 (ENSCDRG00005010603) #28	HSPB3 (ENSCDRG00005010636) #29	ARL15 (ENSCDRG00005010655) #30	NDUFS4 (ENSCDRG00005010718) #31	FST (ENSCDRG00005010829) #32	MOCS2 (ENSCDRG00005011057) #33	ITGA2 (ENSCDRG00005011170) #34	ITGA1 (ENSCDRG00005011314) #35
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000014845.j.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000155541.C.eb.a	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000014845.j.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000155541.C.eb.a	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00910000148205	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000014845.j.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055.f	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000155541.C.eb.a	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00910000148205	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000016972.a.a.b.b.b.b.b	ENSGT00390000014845.j.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055.f	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000157507 #14	ENSGT00940000155541.C.eb.a	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000162741.j.u.s	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00910000148205	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00390000016972.a.a.b.b.b.b.b	ENSGT00390000014845.j.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00390000001055.f	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000157507 #14	ENSGT00940000155541.C.eb.a	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000162741.j.u.s	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00910000148205	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00950000183029.B.c.b.b.b.b
Narwhal	MODERN SPECIES	298	ENSMMNG00015002005	MIER3 (ENSMMNG00015001839) #8	SETD9 (ENSMMNG00015001788) #9	MAP3K1 (ENSMMNG00015001694) #10	ENSMMNG00015001652	ANKRD55 (ENSMMNG00015001575) #11	IL6ST (ENSMMNG00015001457) #12	ENSMMNG00015001383	DDX4 (ENSMMNG00015001342) #14	SLC38A9 (ENSMMNG00015001219) #17	PLPP1 (ENSMMNG00015001177) #18	ENSMMNG00015001146	MTREX (ENSMMNG00015001080) #19	DHX29 (ENSMMNG00015000933) #20	CCNO (ENSMMNG00015000878) #21	MCIDAS (ENSMMNG00015000848) #22	GPX8 (ENSMMNG00015000825) #24	CDC20B (ENSMMNG00015000730) #23	GZMA (ENSMMNG00015000678) #25	ENSMMNG00015000656	GZMK (ENSMMNG00015000622) #26	ESM1 (ENSMMNG00015000601) #27	ENSMMNG00015000591	ENSMMNG00015000584	SNX18 (ENSMMNG00015000568) #28	ENSMMNG00015000543	HSPB3 (ENSMMNG00015000523) #29	ENSMMNG00015000518	ARL15 (ENSMMNG00015000469) #30	NDUFS4 (ENSMMNG00015000413) #31	ENSMMNG00015000397
Beluga whale	MODERN SPECIES	71	ENSDLEG00000008483	ENSDLEG00000008493	MIER3 (ENSDLEG00000008535) #8	SETD9 (ENSDLEG00000008578) #9	MAP3K1 (ENSDLEG00000008628) #10	ANKRD55 (ENSDLEG00000008801) #11	IL6ST (ENSDLEG00000009072) #12	DDX4 (ENSDLEG00000009164) #14	ENSDLEG00000009260	SLC38A9 (ENSDLEG00000009277) #17	PLPP1 (ENSDLEG00000009350) #18	SKIV2L2 (ENSDLEG00000009383) #19	ENSDLEG00000009445	DHX29 (ENSDLEG00000009482) #20	CCNO (ENSDLEG00000009538) #21	MCIDAS (ENSDLEG00000009551) #22	GPX8 (ENSDLEG00000009596) #24	GZMA (ENSDLEG00000009603) #25	ENSDLEG00000009627	GZMK (ENSDLEG00000009688) #26	ESM1 (ENSDLEG00000009703) #27	ENSDLEG00000009723	SNX18 (ENSDLEG00000009741) #28	HSPB3 (ENSDLEG00000009775) #29	ARL15 (ENSDLEG00000009798) #30	NDUFS4 (ENSDLEG00000009844) #31	FST (ENSDLEG00000009866) #32	ENSDLEG00000009877	MOCS2 (ENSDLEG00000009900) #33	ITGA2 (ENSDLEG00000009923) #34	ITGA1 (ENSDLEG00000009983) #35
Vaquita	MODERN SPECIES	14	GPBP1 (ENSPSNG00000007173) #7	ENSPSNG00000007254	MIER3 (ENSPSNG00000007302) #8	SETD9 (ENSPSNG00000007390) #9	MAP3K1 (ENSPSNG00000007497) #10	ANKRD55 (ENSPSNG00000007659) #11	ENSPSNG00000007865	IL6ST (ENSPSNG00000007919) #12	DDX4 (ENSPSNG00000008161) #14	ENSPSNG00000008609	SLC38A9 (ENSPSNG00000008670) #17	PLPP1 (ENSPSNG00000008897) #18	MTREX (ENSPSNG00000008960) #19	DHX29 (ENSPSNG00000009012) #20	CCNO (ENSPSNG00000009072) #21	MCIDAS (ENSPSNG00000009107) #22	CDC20B (ENSPSNG00000009260) #23	GPX8 (ENSPSNG00000009376) #24	GZMA (ENSPSNG00000009403) #25	ENSPSNG00000009465	GZMK (ENSPSNG00000009523) #26	ESM1 (ENSPSNG00000009562) #27	ENSPSNG00000009610	SNX18 (ENSPSNG00000009657) #28	ENSPSNG00000009694	HSPB3 (ENSPSNG00000009713) #29	ARL15 (ENSPSNG00000009733) #30	ENSPSNG00000009804	NDUFS4 (ENSPSNG00000009851) #31	FST (ENSPSNG00000009907) #32	ENSPSNG00000009964
Sperm whale	MODERN SPECIES	19	PLK2 (ENSPCTG00005008711)	ENSPCTG00005008643	GPBP1 (ENSPCTG00005008461) #7	ENSPCTG00005008417	MIER3 (ENSPCTG00005008372) #8	SETD9 (ENSPCTG00005008333) #9	MAP3K1 (ENSPCTG00005008180) #10	ANKRD55 (ENSPCTG00005008012) #11	IL6ST (ENSPCTG00005007883) #12	DDX4 (ENSPCTG00005007231) #14	SLC38A9 (ENSPCTG00005007077) #17	PLPP1 (ENSPCTG00005006991) #18	MTREX (ENSPCTG00005006859) #19	DHX29 (ENSPCTG00005006618) #20	CCNO (ENSPCTG00005006575) #21	MCIDAS (ENSPCTG00005006552) #22	GPX8 (ENSPCTG00005006513) #24	CDC20B (ENSPCTG00005006273) #23	GZMA (ENSPCTG00005006218) #25	ENSPCTG00005006135	GZMK (ENSPCTG00005006097) #26	ESM1 (ENSPCTG00005006083) #27	ENSPCTG00005006068	SNX18 (ENSPCTG00005006054) #28	HSPB3 (ENSPCTG00005006034) #29	ENSPCTG00005006021	ARL15 (ENSPCTG00005005999) #30	NDUFS4 (ENSPCTG00005005967) #31	FST (ENSPCTG00005005919) #32	ENSPCTG00005005887	MOCS2 (ENSPCTG00005005839) #33
Blue whale	MODERN SPECIES	14	ENSBMSG00010006086	ENSBMSG00010006071	MIER3 (ENSBMSG00010006049) #8	SETD9 (ENSBMSG00010006020) #9	MAP3K1 (ENSBMSG00010005939) #10	ANKRD55 (ENSBMSG00010005861) #11	ENSBMSG00010005820 #12	ENSBMSG00010005786	ENSBMSG00010005776	DDX4 (ENSBMSG00010005616) #14	SLC38A9 (ENSBMSG00010005443) #17	PLPP1 (ENSBMSG00010005419) #18	ENSBMSG00010005373 #19	DHX29 (ENSBMSG00010005343) #20	CCNO (ENSBMSG00010005327) #21	MCIDAS (ENSBMSG00010005310) #22	GPX8 (ENSBMSG00010005290) #24	CDC20B (ENSBMSG00010005217) #23	GZMA (ENSBMSG00010005128) #25	ENSBMSG00010005115	GZMK (ENSBMSG00010005097) #26	ESM1 (ENSBMSG00010003212) #27	ENSBMSG00010003197	SNX18 (ENSBMSG00010003192) #28	HSPB3 (ENSBMSG00010003181) #29	ARL15 (ENSBMSG00010003168) #30	NDUFS4 (ENSBMSG00010003160) #31	FST (ENSBMSG00010003132) #32	ENSBMSG00010003123	MOCS2 (ENSBMSG00010003109) #33	ITGA2 (ENSBMSG00010003072) #34
Pecora	ANCESTRAL SPECIES	25	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Percora_a	ANCESTRAL SPECIES	26	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00960000192181	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Bovidae	ANCESTRAL SPECIES	26	ENSGT01030000234597.a.a.i.a.c	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00960000192181	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Caprinae	ANCESTRAL SPECIES	24	ENSGT01030000234597.a.a.i.a.c	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00960000192181	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286.c #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Goat	MODERN SPECIES	12	ENSCHIG00000023745	GPBP1 (ENSCHIG00000009727) #7	MIER3 (ENSCHIG00000018553) #8	SETD9 (ENSCHIG00000012396) #9	MAP3K1 (ENSCHIG00000026351) #10	ANKRD55 (ENSCHIG00000008524) #11	IL6ST (ENSCHIG00000008069) #12	IL31RA (ENSCHIG00000012832) #13	DDX4 (ENSCHIG00000015567) #14	SLC38A9 (ENSCHIG00000018284) #17	PLPP1 (ENSCHIG00000020725) #18	MTREX (ENSCHIG00000024413) #19	ENSCHIG00000008951	ENSCHIG00000013568 #20	CCNO (ENSCHIG00000017129) #21	MCIDAS (ENSCHIG00000020342) #22	GPX8 (ENSCHIG00000022755) #24	GZMA (ENSCHIG00000007230) #25	ENSCHIG00000013164	GZMK (ENSCHIG00000017343) #26	ENSCHIG00000021601	ESM1 (ENSCHIG00000003279) #27	ENSCHIG00000012660	ENSCHIG00000016742	SNX18 (ENSCHIG00000021028) #28	HSPB3 (ENSCHIG00000002665) #29	ENSCHIG00000027018 #30	NDUFS4 (ENSCHIG00000025172) #31	ENSCHIG00000026360	FST (ENSCHIG00000016855) #32	ENSCHIG00000007720
Rambouillet Sheep	MODERN SPECIES	7	ACTBL2 (ENSOARG00020009217)	GPBP1 (ENSOARG00020009240) #7	MIER3 (ENSOARG00020009384) #8	SETD9 (ENSOARG00020009529) #9	MAP3K1 (ENSOARG00020009639) #10	ENSOARG00020009949 #11	ENSOARG00020010060	IL6ST (ENSOARG00020010171) #12	IL31RA (ENSOARG00020010588) #13	DDX4 (ENSOARG00020011498) #14	SLC38A9 (ENSOARG00020011663) #17	PLPP1 (ENSOARG00020011909) #18	MTREX (ENSOARG00020011982) #19	DHX29 (ENSOARG00020012396) #20	CCNO (ENSOARG00020012617) #21	MCIDAS (ENSOARG00020012677) #22	CDC20B (ENSOARG00020012773) #23	GPX8 (ENSOARG00020012946) #24	GZMA (ENSOARG00020013055) #25	ENSOARG00020013122	GZMK (ENSOARG00020013183) #26	ESM1 (ENSOARG00020013293) #27	ENSOARG00020013333	ENSOARG00020013365	SNX18 (ENSOARG00020013467) #28	HSPB3 (ENSOARG00020013509) #29	ARL15 (ENSOARG00020003211) #30	NDUFS4 (ENSOARG00020003246) #31	FST (ENSOARG00020003280) #32	RPS12 (ENSOARG00020003307)	MOCS2 (ENSOARG00020003333) #33
Bovinae	ANCESTRAL SPECIES	25	ENSGT00940000162627	ENSGT01030000234597.a.a.i.a.c	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Bos	ANCESTRAL SPECIES	26	ENSGT01030000234597.a.a.i.a.c	ENSGT00420000029753.a #7	ENSGT00950000183198.c.a.b.b	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Bos_b	ANCESTRAL SPECIES	29	ENSGT01030000234597.a.a.i.a.c	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT01100000263481.n.a.a.b.b.b.b.a.a.b.b	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00390000006255.b.b.e	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Cow	MODERN SPECIES	12	GPBP1 (ENSBTAG00000012124) #7	ENSBTAG00000053164	MIER3 (ENSBTAG00000014248) #8	SETD9 (ENSBTAG00000013426) #9	MAP3K1 (ENSBTAG00000013790) #10	ANKRD55 (ENSBTAG00000001001) #11	IL6ST (ENSBTAG00000017745) #12	IL31RA (ENSBTAG00000004351) #13	DDX4 (ENSBTAG00000008871) #14	SLC38A9 (ENSBTAG00000033313) #17	PLPP1 (ENSBTAG00000010526) #18	MTREX (ENSBTAG00000010518) #19	DHX29 (ENSBTAG00000010510) #20	ENSBTAG00000048821	CCNO (ENSBTAG00000047594) #21	MCIDAS (ENSBTAG00000047087) #22	CDC20B (ENSBTAG00000021959) #23	GPX8 (ENSBTAG00000021960) #24	GZMA (ENSBTAG00000021958) #25	gzmA (ENSBTAG00000027865)	GZMK (ENSBTAG00000005164) #26	ESM1 (ENSBTAG00000004221) #27	CSPG4B (ENSBTAG00000003200)	ENSBTAG00000004920	SNX18 (ENSBTAG00000027924) #28	HSPB3 (ENSBTAG00000022714) #29	ARL15 (ENSBTAG00000019834) #30	NDUFS4 (ENSBTAG00000003728) #31	FST (ENSBTAG00000003329) #32	MOCS2 (ENSBTAG00000005380) #33	ITGA2 (ENSBTAG00000019289) #34
Hybrid Bos Indicus	MODERN SPECIES	12	ENSBIXG00005012815	MIER3 (ENSBIXG00005012800) #8	SETD9 (ENSBIXG00005012763) #9	MAP3K1 (ENSBIXG00005000296) #10	ANKRD55 (ENSBIXG00005012491) #11	IL6ST (ENSBIXG00005001329) #12	IL31RA (ENSBIXG00005012353) #13	DDX4 (ENSBIXG00005001293) #14	SLC38A9 (ENSBIXG00005012214) #17	ENSBIXG00005011978	PLPP1 (ENSBIXG00005011965) #18	MTREX (ENSBIXG00005011914) #19	DHX29 (ENSBIXG00005001183) #20	ENSBIXG00005011769	CCNO (ENSBIXG00005011751) #21	MCIDAS (ENSBIXG00005011738) #22	CDC20B (ENSBIXG00005011710) #23	GPX8 (ENSBIXG00005011672) #24	GZMA (ENSBIXG00005011634) #25	ENSBIXG00005011627	GZMK (ENSBIXG00005011605) #26	ESM1 (ENSBIXG00005011585) #27	ENSBIXG00005011543	ENSBIXG00005011507	ENSBIXG00005011482	SNX18 (ENSBIXG00005001110) #28	HSPB3 (ENSBIXG00005011429) #29	ARL15 (ENSBIXG00005001098) #30	ENSBIXG00005011371	ENSBIXG00005011365	NDUFS4 (ENSBIXG00005001086) #31
Bos_a	ANCESTRAL SPECIES	86								ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Wild yak	MODERN SPECIES	79								IL6ST (ENSBMUG00000023583) #12	IL31RA (ENSBMUG00000023518) #13	DDX4 (ENSBMUG00000023470) #14	SLC38A9 (ENSBMUG00000023382) #17	PLPP1 (ENSBMUG00000023336) #18	MTREX (ENSBMUG00000023304) #19	DHX29 (ENSBMUG00000023266) #20	CCNO (ENSBMUG00000023234) #21	MCIDAS (ENSBMUG00000023230) #22	GPX8 (ENSBMUG00000023181) #24	CDC20B (ENSBMUG00000023160) #23	GZMA (ENSBMUG00000023119) #25	ENSBMUG00000023111	ENSBMUG00000023107	GZMK (ENSBMUG00000023098) #26	ESM1 (ENSBMUG00000023090) #27	ENSBMUG00000023075	SNX18 (ENSBMUG00000023053) #28	HSPB3 (ENSBMUG00000023038) #29	ARL15 (ENSBMUG00000023029) #30	NDUFS4 (ENSBMUG00000023018) #31	FST (ENSBMUG00000022999) #32	MOCS2 (ENSBMUG00000022979) #33
Domestic yak	MODERN SPECIES	15												PLPP1 (ENSBGRG00000022429) #18	MTREX (ENSBGRG00000022289) #19	DHX29 (ENSBGRG00000021604) #20	CCNO (ENSBGRG00000021545) #21	MCIDAS (ENSBGRG00000021503) #22	GPX8 (ENSBGRG00000021439) #24	CDC20B (ENSBGRG00000021354) #23	GZMA (ENSBGRG00000021322) #25	ENSBGRG00000021299	GZMK (ENSBGRG00000021243) #26	ESM1 (ENSBGRG00000021214) #27	ENSBGRG00000021089	ENSBGRG00000021060	SNX18 (ENSBGRG00000021046) #28	HSPB3 (ENSBGRG00000021023) #29	ARL15 (ENSBGRG00000020951) #30	ENSBGRG00000020940	NDUFS4 (ENSBGRG00000020781) #31	FST (ENSBGRG00000020668) #32	MOCS2 (ENSBGRG00000020522) #33
American bison	MODERN SPECIES	3292										ENSBBBG00000016388	ENSBBBG00000016377	PLPP1 (ENSBBBG00000016367) #18	MTREX (ENSBBBG00000016351) #19	DHX29 (ENSBBBG00000016323) #20	CCNO (ENSBBBG00000016256) #21	MCIDAS (ENSBBBG00000004031) #22	CDC20B (ENSBBBG00000016236) #23	GPX8 (ENSBBBG00000016165) #24	GZMA (ENSBBBG00000016158) #25	ENSBBBG00000016149	GZMK (ENSBBBG00000016130) #26	ESM1 (ENSBBBG00000016127) #27	ENSBBBG00000004006	SNX18 (ENSBBBG00000016120) #28	HSPB3 (ENSBBBG00000016114) #29	ARL15 (ENSBBBG00000002554) #30	NDUFS4 (ENSBBBG00000016099) #31	FST (ENSBBBG00000016088) #32	ENSBBBG00000016058 #33	ITGA2 (ENSBBBG00000016020) #34	ITGA1 (ENSBBBG00000015980) #35
Siberian musk deer	MODERN SPECIES	22	GPBP1 (ENSMMSG00000001371) #7	MIER3 (ENSMMSG00000001337) #8	SETD9 (ENSMMSG00000001315) #9	MAP3K1 (ENSMMSG00000001225) #10	ENSMMSG00000001194	ENSMMSG00000001179 #11	ENSMMSG00000001170	IL6ST (ENSMMSG00000001065) #12	IL31RA (ENSMMSG00000000927) #13	DDX4 (ENSMMSG00000000604) #14	SLC38A9 (ENSMMSG00000000513) #17	PLPP1 (ENSMMSG00000000470) #18	MTREX (ENSMMSG00000000381) #19	DHX29 (ENSMMSG00000000314) #20	CCNO (ENSMMSG00000000293) #21	MCIDAS (ENSMMSG00000000277) #22	GPX8 (ENSMMSG00000000238) #24	GZMA (ENSMMSG00000000213) #25	ENSMMSG00000000193	GZMK (ENSMMSG00000000166) #26	ESM1 (ENSMMSG00000000146) #27	ENSMMSG00000000135	ENSMMSG00000000124	SNX18 (ENSMMSG00000000112) #28	HSPB3 (ENSMMSG00000000102) #29	ARL15 (ENSMMSG00000000089) #30	NDUFS4 (ENSMMSG00000000076) #31	FST (ENSMMSG00000000042) #32	ENSMMSG00000000019	MOCS2 (ENSMMSG00000000007) #33	ITGA2 (ENSMMSG00000004263) #34
Yarkand deer	MODERN SPECIES	17	ENSCHYG00000020266 #7	MIER3 (ENSCHYG00000020709) #8	SETD9 (ENSCHYG00000021190) #9	MAP3K1 (ENSCHYG00000021347) #10	ENSCHYG00000021592	ANKRD55 (ENSCHYG00000021687) #11	IL6ST (ENSCHYG00000021849) #12	IL31RA (ENSCHYG00000022153) #13	DDX4 (ENSCHYG00000022343) #14	ENSCHYG00000022385	SLC38A9 (ENSCHYG00000022437) #17	PLPP1 (ENSCHYG00000022811) #18	MTREX (ENSCHYG00000022902) #19	DHX29 (ENSCHYG00000023078) #20	CCNO (ENSCHYG00000023862) #21	MCIDAS (ENSCHYG00000023898) #22	CDC20B (ENSCHYG00000023941) #23	GPX8 (ENSCHYG00000024127) #24	GZMA (ENSCHYG00000024172) #25	ENSCHYG00000024197	ENSCHYG00000024225	GZMK (ENSCHYG00000024238) #26	ESM1 (ENSCHYG00000024268) #27	ENSCHYG00000024293 #28	HSPB3 (ENSCHYG00000024317) #29	ARL15 (ENSCHYG00000024342) #30	ENSCHYG00000024359	NDUFS4 (ENSCHYG00000024374) #31	FST (ENSCHYG00000024403) #32	MOCS2 (ENSCHYG00000024499) #33	ITGA2 (ENSCHYG00000024553) #34
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Carnivora	ANCESTRAL SPECIES	8	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00900000141664	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185
Caniformia	ANCESTRAL SPECIES	5	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00900000141664	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00900000141664	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185
Ursidae	ANCESTRAL SPECIES	16	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00940000157838.jb.b	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00900000141664	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185
Ursus	ANCESTRAL SPECIES	3	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00940000157838.jb.b	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00900000141664	ENSGT00530000064225	ENSGT01090000262396	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b	ENSGT00940000157770
American black bear	MODERN SPECIES	522															CCNO (ENSUAMG00000027599) #21	MCIDAS (ENSUAMG00000027600) #22	GPX8 (ENSUAMG00000027601) #24	GZMA (ENSUAMG00000027602) #25	ENSUAMG00000027603	ENSUAMG00000027605	ENSUAMG00000027606	SPINK5 (ENSUAMG00000027608)	C5orf46 (ENSUAMG00000000041)	SCGB3A2 (ENSUAMG00000000124)	SPINK1 (ENSUAMG00000000163)	ENSUAMG00000000173	ENSUAMG00000000310
Polar bear	MODERN SPECIES	173	ACTBL2 (ENSUMAG00000009043)	GPBP1 (ENSUMAG00000009045) #7	MIER3 (ENSUMAG00000009049) #8	SETD9 (ENSUMAG00000009051) #9	MAP3K1 (ENSUMAG00000009059) #10	ENSUMAG00000009135	ANKRD55 (ENSUMAG00000009149) #11	IL6ST (ENSUMAG00000009177) #12	IL31RA (ENSUMAG00000009184) #13	DDX4 (ENSUMAG00000009291) #14	SLC38A9 (ENSUMAG00000009309) #17	ENSUMAG00000009320	PLPP1 (ENSUMAG00000009322) #18	MTREX (ENSUMAG00000009373) #19	DHX29 (ENSUMAG00000009971) #20	MCIDAS (ENSUMAG00000009979) #22	GPX8 (ENSUMAG00000009983) #24	GZMA (ENSUMAG00000009994) #25	ENSUMAG00000010001	ENSUMAG00000010005	ENSUMAG00000010006	SPINK5 (ENSUMAG00000010011)	C5orf46 (ENSUMAG00000010023)	SCGB3A2 (ENSUMAG00000010025)	ENSUMAG00000010026	JAKMIP2 (ENSUMAG00000010033)	DPYSL3 (ENSUMAG00000010043)	STK32A (ENSUMAG00000010054)	PPP2R2B (ENSUMAG00000010087)	GPR151 (ENSUMAG00000010178)	TCERG1 (ENSUMAG00000010213)
Giant Panda	MODERN SPECIES	13	GPBP1 (ENSAMEG00000003700) #7	MIER3 (ENSAMEG00000003653) #8	SETD9 (ENSAMEG00000003650) #9	MAP3K1 (ENSAMEG00000003644) #10	ENSAMEG00000024978	ANKRD55 (ENSAMEG00000003651) #11	IL6ST (ENSAMEG00000003582) #12	IL31RA (ENSAMEG00000003578) #13	DDX4 (ENSAMEG00000013960) #14	SLC38A9 (ENSAMEG00000013926) #17	PLPP1 (ENSAMEG00000013923) #18	MTREX (ENSAMEG00000013856) #19	DHX29 (ENSAMEG00000013838) #20	ENSAMEG00000029744	CCNO (ENSAMEG00000009442) #21	MCIDAS (ENSAMEG00000009445) #22	GPX8 (ENSAMEG00000009459) #24	ENSAMEG00000009452 #23	ENSAMEG00000009461 #25	ENSAMEG00000026559	SPINK6 (ENSAMEG00000009490)	SPINK14 (ENSAMEG00000019415)	ENSAMEG00000009493	SPINK5 (ENSAMEG00000009497)	C5orf46 (ENSAMEG00000027635)	SCGB3A2 (ENSAMEG00000000437)	SPINK1 (ENSAMEG00000026454)	JAKMIP2 (ENSAMEG00000002980)	DPYSL3 (ENSAMEG00000003024)	STK32A (ENSAMEG00000003153)	PPP2R2B (ENSAMEG00000017620)
Mustelinae	ANCESTRAL SPECIES	17	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b
Ferret	MODERN SPECIES	175	ENSMPUG00000007431	GPBP1 (ENSMPUG00000007439) #7	ENSMPUG00000007449	MIER3 (ENSMPUG00000007453) #8	SETD9 (ENSMPUG00000007469) #9	MAP3K1 (ENSMPUG00000007493) #10	ANKRD55 (ENSMPUG00000007513) #11	ENSMPUG00000007526	IL6ST (ENSMPUG00000007532) #12	IL31RA (ENSMPUG00000007550) #13	DDX4 (ENSMPUG00000007596) #14	SLC38A9 (ENSMPUG00000007611) #17	MTREX (ENSMPUG00000007619) #19	DHX29 (ENSMPUG00000007636) #20	CCNO (ENSMPUG00000007657) #21	MCIDAS (ENSMPUG00000007663) #22	GPX8 (ENSMPUG00000007679) #24	ENSMPUG00000007686 #23	ENSMPUG00000007695 #23	GZMA (ENSMPUG00000007703) #25	ENSMPUG00000007707	ENSMPUG00000007717	SPINK5 (ENSMPUG00000007719)	C5orf46 (ENSMPUG00000007744)	SPINK1 (ENSMPUG00000007762)	JAKMIP2 (ENSMPUG00000007772)	DPYSL3 (ENSMPUG00000007786)	STK32A (ENSMPUG00000007797)	ENSMPUG00000007807	PPP2R2B (ENSMPUG00000007809)	GPR151 (ENSMPUG00000020043)
American mink	MODERN SPECIES	16	ENSNVIG00000008711	GPBP1 (ENSNVIG00000008720) #7	MIER3 (ENSNVIG00000008815) #8	SETD9 (ENSNVIG00000008874) #9	MAP3K1 (ENSNVIG00000008906) #10	ENSNVIG00000008948	ANKRD55 (ENSNVIG00000008977) #11	IL6ST (ENSNVIG00000009064) #12	IL31RA (ENSNVIG00000009213) #13	DDX4 (ENSNVIG00000009319) #14	SLC38A9 (ENSNVIG00000009590) #17	PLPP1 (ENSNVIG00000009623) #18	SK2L2 (ENSNVIG00000009655) #19	DHX29 (ENSNVIG00000009770) #20	CCNO (ENSNVIG00000009827) #21	MCIDAS (ENSNVIG00000009842) #22	CDC20B (ENSNVIG00000009857) #23	GPX8 (ENSNVIG00000009910) #24	GRAA (ENSNVIG00000009924) #25	ENSNVIG00000009937	ENSNVIG00000009941	SPINK6 (ENSNVIG00000009945)	SPINK14 (ENSNVIG00000009971)	ENSNVIG00000009982	SPINK5 (ENSNVIG00000010018)	C5orf46 (ENSNVIG00000010083)	SCGB3A2 (ENSNVIG00000010090)	SPINK1 (ENSNVIG00000010095)	JKIP2 (ENSNVIG00000010129)	DPYSL3 (ENSNVIG00000010499)	STK32A (ENSNVIG00000010548)
Canidae	ANCESTRAL SPECIES	29	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT01050000245142.b	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00900000141664	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00990000204698	ENSGT00940000153713.B.d	ENSGT00940000156204.eb	ENSGT01030000234527.A.a.b.b.a
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT01050000245142.b	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT01030000235945	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00390000011067.A.ib.a	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00950000183030.m.a.a.b.a.a.b.g	ENSGT00940000153713.B.d
Dingo	MODERN SPECIES	41	MIER3 (ENSCAFG00020023939) #8	SETD9 (ENSCAFG00020023949) #9	MAP3K1 (ENSCAFG00020023953) #10	ANKRD55 (ENSCAFG00020023981) #11	IL6ST (ENSCAFG00020024000) #12	ENSCAFG00020024263	IL31RA (ENSCAFG00020024266) #13	DDX4 (ENSCAFG00020024295) #14	SLC38A9 (ENSCAFG00020024304) #17	ENSCAFG00020024343	PLPP1 (ENSCAFG00020024348) #18	ENSCAFG00020024350	MTREX (ENSCAFG00020024352) #19	DHX29 (ENSCAFG00020024395) #20	CCNO (ENSCAFG00020024748) #21	MCIDAS (ENSCAFG00020024749) #22	ENSCAFG00020024756 #24	ENSCAFG00020024758	GZMA (ENSCAFG00020024759) #25	ENSCAFG00020024761	SPINK14 (ENSCAFG00020024762)	ENSCAFG00020024763	ENSCAFG00020024766	ENSCAFG00020024767	ENSCAFG00020024769	C5orf46 (ENSCAFG00020024771)	ENSCAFG00020024774	SPINK1 (ENSCAFG00020024776)	ENSCAFG00020024779	JAKMIP2 (ENSCAFG00020024782)	ENSCAFG00020024786
Dog	MODERN SPECIES	11	GPBP1 (ENSCAFG00845029009) #7	MIER3 (ENSCAFG00845028806) #8	SETD9 (ENSCAFG00845028740) #9	MAP3K1 (ENSCAFG00845028679) #10	ANKRD55 (ENSCAFG00845028592) #11	IL6ST (ENSCAFG00845028368) #12	ENSCAFG00845028281	IL31RA (ENSCAFG00845027862) #13	ENSCAFG00845027734	SLC38A9 (ENSCAFG00845027599) #17	ENSCAFG00845027553	PLPP1 (ENSCAFG00845027433) #18	MTREX (ENSCAFG00845027076) #19	DHX29 (ENSCAFG00845026675) #20	CCNO (ENSCAFG00845026622) #21	MCIDAS (ENSCAFG00845026568) #22	GPX8 (ENSCAFG00845026365) #24	ENSCAFG00845026319	CDC20B (ENSCAFG00845025892) #23	GZMA (ENSCAFG00845025798) #25	ENSCAFG00845025759	SPINK6 (ENSCAFG00845025666)	SPINK14 (ENSCAFG00845025604)	ENSCAFG00845025474	SPINK5 (ENSCAFG00845025212)	C2H5orf46 (ENSCAFG00845025146)	ENSCAFG00845025111	SCGB3A2 (ENSCAFG00845025063)	SPINK1 (ENSCAFG00845025025)	ENSCAFG00845025006	JAKMIP2 (ENSCAFG00845024023)
Red fox	MODERN SPECIES	4	SETD9 (ENSVVUG00000021441) #9	MAP3K1 (ENSVVUG00000021439) #10	ENSVVUG00000021432	ANKRD55 (ENSVVUG00000021427) #11	IL6ST (ENSVVUG00000021415) #12	ENSVVUG00000021408	ENSVVUG00000021400 #13	DDX4 (ENSVVUG00000021369) #14	ENSVVUG00000021361	SLC38A9 (ENSVVUG00000021357) #17	PLPP1 (ENSVVUG00000021353) #18	ENSVVUG00000021349	MTREX (ENSVVUG00000021337) #19	DHX29 (ENSVVUG00000021328) #20	CCNO (ENSVVUG00000021324) #21	MCIDAS (ENSVVUG00000021322) #22	GPX8 (ENSVVUG00000021318) #24	GZMA (ENSVVUG00000021314) #25	CDC20B (ENSVVUG00000021307) #23	MARCOL (ENSVVUG00000021298)	ENSVVUG00000021295	SPINK6 (ENSVVUG00000021292)	ENSVVUG00000021290	ENSVVUG00000021286	SPINK5 (ENSVVUG00000021278)	ENSVVUG00000021277	CUNH5orf46 (ENSVVUG00000021274)	ENSVVUG00000021271	JAKMIP2 (ENSVVUG00000021244)	ENSVVUG00000021237	DPYSL3 (ENSVVUG00000021224)
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00950000184991	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00950000184991	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00740000116871	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00950000184991	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00530000064225	ENSGT00940000162856	ENSGT00520000060726.a	ENSGT00510000048608	ENSGT00390000011484	ENSGT00420000029848.B	ENSGT00530000064228	ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT01030000234518.A.a.b
lion	MODERN SPECIES		ENSPLOG00000006987	MIER3 (ENSPLOG00000007021) #8	SETD9 (ENSPLOG00000007094) #9	MAP3K1 (ENSPLOG00000007149) #10	ENSPLOG00000007232	ANKRD55 (ENSPLOG00000007267) #11	ENSPLOG00000007349	IL6ST (ENSPLOG00000007395) #12	IL31RA (ENSPLOG00000007473) #13	DDX4 (ENSPLOG00000007635) #14	SLC38A9 (ENSPLOG00000007994) #17	PLPP1 (ENSPLOG00000008169) #18	MTREX (ENSPLOG00000008258) #19	DHX29 (ENSPLOG00000008419) #20	CCNO (ENSPLOG00000008806) #21	MCIDAS (ENSPLOG00000008839) #22	CDC20B (ENSPLOG00000008907) #23	GPX8 (ENSPLOG00000009120) #24	GZMA (ENSPLOG00000009168) #25	ENSPLOG00000009189	SPINK6 (ENSPLOG00000009215)	ENSPLOG00000009257	ENSPLOG00000009297	ENSPLOG00000009328	SPINK5 (ENSPLOG00000009383)	C5orf46 (ENSPLOG00000009751)	SCGB3A2 (ENSPLOG00000009780)	SPINK1 (ENSPLOG00000009794)	JAKMIP2 (ENSPLOG00000009909)	DPYSL3 (ENSPLOG00000010354)	STK32A (ENSPLOG00000010529)
leopard	MODERN SPECIES	63	ACTBL2 (ENSPPRG00000021605)	GPBP1 (ENSPPRG00000024025) #7	MIER3 (ENSPPRG00000000817) #8	SETD9 (ENSPPRG00000001377) #9	MAP3K1 (ENSPPRG00000001640) #10	ANKRD55 (ENSPPRG00000003671) #11	ENSPPRG00000003754	IL6ST (ENSPPRG00000005507) #12	IL31RA (ENSPPRG00000006813) #13	DDX4 (ENSPPRG00000011417) #14	SLC38A9 (ENSPPRG00000013047) #17	PLPP1 (ENSPPRG00000016093) #18	MTREX (ENSPPRG00000019701) #19	DHX29 (ENSPPRG00000024000) #20	CCNO (ENSPPRG00000023872) #21	MCIDAS (ENSPPRG00000023741) #22	GPX8 (ENSPPRG00000023333) #24	CDC20B (ENSPPRG00000022638) #23	GZMA (ENSPPRG00000000180) #25	SPINK6 (ENSPPRG00000000485)	SPINK14 (ENSPPRG00000000754)	ENSPPRG00000001637	SPINK5 (ENSPPRG00000005348)	ENSPPRG00000006211	C5orf46 (ENSPPRG00000006516)	SCGB3A2 (ENSPPRG00000006574)	SPINK1 (ENSPPRG00000006808)	JAKMIP2 (ENSPPRG00000008408)	DPYSL3 (ENSPPRG00000009159)	STK32A (ENSPPRG00000011494)	PPP2R2B (ENSPPRG00000014994)
Tiger	MODERN SPECIES	134	ACTBL2 (ENSPTIG00000006438)	GPBP1 (ENSPTIG00000020914) #7	MIER3 (ENSPTIG00000021104) #8	SETD9 (ENSPTIG00000021291) #9	MAP3K1 (ENSPTIG00000002958) #10	ANKRD55 (ENSPTIG00000004515) #11	ENSPTIG00000005369	IL6ST (ENSPTIG00000005695) #12	IL31RA (ENSPTIG00000006791) #13	DDX4 (ENSPTIG00000007748) #14	SLC38A9 (ENSPTIG00000008862) #17	PLPP1 (ENSPTIG00000009167) #18	MTREX (ENSPTIG00000009313) #19	DHX29 (ENSPTIG00000009977) #20	CCNO (ENSPTIG00000010029) #21	MCIDAS (ENSPTIG00000010130) #22	CDC20B (ENSPTIG00000010212) #23	GPX8 (ENSPTIG00000010489) #24	GZMA (ENSPTIG00000010522) #25	ENSPTIG00000010567	SPINK6 (ENSPTIG00000010680)	SPINK14 (ENSPTIG00000010914)	ENSPTIG00000011009	SPINK5 (ENSPTIG00000011162)	C5orf46 (ENSPTIG00000012037)	SCGB3A2 (ENSPTIG00000012051)	SPINK1 (ENSPTIG00000012063)	JAKMIP2 (ENSPTIG00000012244)	DPYSL3 (ENSPTIG00000012511)	STK32A (ENSPTIG00000012579)	PPP2R2B (ENSPTIG00000012896)
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Equus	ANCESTRAL SPECIES	23	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000154950.x	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00910000148656	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Horse	MODERN SPECIES	13	PLK2 (ENSECAG00000000354)	ACTBL2 (ENSECAG00000004482)	GPBP1 (ENSECAG00000021610) #7	MIER3 (ENSECAG00000012867) #8	SETD9 (ENSECAG00000006497) #9	MAP3K1 (ENSECAG00000006890) #10	ANKRD55 (ENSECAG00000015842) #11	IL6ST (ENSECAG00000019750) #12	IL31RA (ENSECAG00000016934) #13	DDX4 (ENSECAG00000023616) #14	SLC38A9 (ENSECAG00000014116) #17	PLPP1 (ENSECAG00000023296) #18	MTREX (ENSECAG00000023723) #19	DHX29 (ENSECAG00000024365) #20	CCNO (ENSECAG00000016023) #21	MCIDAS (ENSECAG00000016538) #22	CDC20B (ENSECAG00000016777) #23	GPX8 (ENSECAG00000023301) #24	GZMA (ENSECAG00000023330) #25	ENSECAG00000035511	GZMK (ENSECAG00000008606) #26	ESM1 (ENSECAG00000013106) #27	SNX18 (ENSECAG00000014364) #28	HSPB3 (ENSECAG00000004498) #29	ENSECAG00000001942	ARL15 (ENSECAG00000014970) #30	NDUFS4 (ENSECAG00000017188) #31	FST (ENSECAG00000017783) #32	MOCS2 (ENSECAG00000005243) #33	ITGA2 (ENSECAG00000010739) #34	ITGA1 (ENSECAG00000017386) #35
Donkey	MODERN SPECIES		ENSEASG00005029617	ACTBL2 (ENSEASG00005030475)	GPBP1 (ENSEASG00005011946) #7	MIER3 (ENSEASG00005011951) #8	SETD9 (ENSEASG00005011953) #9	MAP3K1 (ENSEASG00005011958) #10	ANKRD55 (ENSEASG00005012015) #11	IL6ST (ENSEASG00005012022) #12	IL31RA (ENSEASG00005012038) #13	DDX4 (ENSEASG00005012143) #14	SLC38A9 (ENSEASG00005013258) #17	PLPP1 (ENSEASG00005013261) #18	MTREX (ENSEASG00005013270) #19	DHX29 (ENSEASG00005013287) #20	CCNO (ENSEASG00005025483) #21	MCIDAS (ENSEASG00005013298) #22	GPX8 (ENSEASG00005034141) #24	CDC20B (ENSEASG00005033033) #23	GZMA (ENSEASG00005013309) #25	ENSEASG00005030700	GZMK (ENSEASG00005013311) #26	ESM1 (ENSEASG00005013315) #27	SNX18 (ENSEASG00005013319) #28	HSPB3 (ENSEASG00005037524) #29	ENSEASG00005013322	ARL15 (ENSEASG00005013324) #30	NDUFS4 (ENSEASG00005013326) #31	FST (ENSEASG00005013329) #32	ENSEASG00005013332	MOCS2 (ENSEASG00005013334) #33	ITGA2 (ENSEASG00005013338) #34
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000153731.a.a #37	ENSGT00950000183129.b.a
Greater horseshoe bat	MODERN SPECIES	25	PLK2 (ENSRFEG00010015198)	ACTBL2 (ENSRFEG00010015171)	GPBP1 (ENSRFEG00010014775) #7	MIER3 (ENSRFEG00010014589) #8	SETD9 (ENSRFEG00010014496) #9	MAP3K1 (ENSRFEG00010014430) #10	ANKRD55 (ENSRFEG00010013992) #11	IL6ST (ENSRFEG00010013742) #12	IL31RA (ENSRFEG00010013055) #13	DDX4 (ENSRFEG00010011980) #14	SLC38A9 (ENSRFEG00010011664) #17	PLPP1 (ENSRFEG00010011593) #18	MTREX (ENSRFEG00010011497) #19	DHX29 (ENSRFEG00010011420) #20	CCNO (ENSRFEG00010011344) #21	MCIDAS (ENSRFEG00010011223) #22	GPX8 (ENSRFEG00010011132) #24	CDC20B (ENSRFEG00010010612) #23	GZMA (ENSRFEG00010010541) #25	GZMK (ENSRFEG00010010484) #26	ESM1 (ENSRFEG00010010430) #27	ENSRFEG00010010404	SNX18 (ENSRFEG00010010352) #28	HSPB3 (ENSRFEG00010010325) #29	ARL15 (ENSRFEG00010020721) #30	ENSRFEG00010020701	NDUFS4 (ENSRFEG00010020688) #31	FST (ENSRFEG00010020647) #32	MOCS2 (ENSRFEG00010020604) #33	ITGA2 (ENSRFEG00010020568) #34	PELO (ENSRFEG00010020545) #36
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT01050000248387	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Xenarthra	ANCESTRAL SPECIES	181								ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29
Armadillo	MODERN SPECIES	4592														DHX29 (ENSDNOG00000015364) #20	CCNO (ENSDNOG00000037688) #21	MCIDAS (ENSDNOG00000033139) #22	ENSDNOG00000035355	GPX8 (ENSDNOG00000045396) #24	CDC20B (ENSDNOG00000015988) #23	GZMA (ENSDNOG00000015987) #25	ENSDNOG00000040181	GZMK (ENSDNOG00000043171) #26	ESM1 (ENSDNOG00000038992) #27	ENSDNOG00000033741	ENSDNOG00000044853	SNX18 (ENSDNOG00000003254) #28	HSPB3 (ENSDNOG00000003947) #29
Afrotheria	ANCESTRAL SPECIES	12	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT01050000248387	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Afrotheria_a	ANCESTRAL SPECIES	12	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00940000167010	ENSGT00940000161886 #26	ENSGT00390000018810 #27	ENSGT01050000248387	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Elephant	MODERN SPECIES	526	PLK2 (ENSLAFG00000003636)	ACTBL2 (ENSLAFG00000013026)	GPBP1 (ENSLAFG00000007190) #7	MIER3 (ENSLAFG00000000991) #8	SETD9 (ENSLAFG00000000989) #9	MAP3K1 (ENSLAFG00000000985) #10	ANKRD55 (ENSLAFG00000015557) #11	IL6ST (ENSLAFG00000017078) #12	IL31RA (ENSLAFG00000017071) #13	DDX4 (ENSLAFG00000005900) #14	SLC38A9 (ENSLAFG00000017511) #17	PLPP1 (ENSLAFG00000026280) #18	MTREX (ENSLAFG00000010497) #19	DHX29 (ENSLAFG00000010492) #20	CCNO (ENSLAFG00000029197) #21	MCIDAS (ENSLAFG00000026782) #22	GPX8 (ENSLAFG00000012118) #24	CDC20B (ENSLAFG00000008320) #23	GZMA (ENSLAFG00000002378) #25	ENSLAFG00000027700	GZMK (ENSLAFG00000002376) #26	ESM1 (ENSLAFG00000016539) #27	ENSLAFG00000027421	SNX18 (ENSLAFG00000009231) #28	HSPB3 (ENSLAFG00000031465) #29	ENSLAFG00000015151 #31	FST (ENSLAFG00000010749) #32	MOCS2 (ENSLAFG00000022830) #33	ITGA2 (ENSLAFG00000018218) #34	ITGA1 (ENSLAFG00000015039) #35	PELO (ENSLAFG00000020551) #36
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a #37
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a #37
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000158739	ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a #37
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000162627	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00940000157209.jb.b	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36	ENSGT00940000153731.a.a #37
koala	MODERN SPECIES	3	ACTBL2 (ENSPCIG00000036711)	GPBP1 (ENSPCIG00000024724) #7	MIER3 (ENSPCIG00000013512) #8	SETD9 (ENSPCIG00000013507) #9	MAP3K1 (ENSPCIG00000013501) #10	ENSPCIG00000013500	ENSPCIG00000010377 #11	IL6ST (ENSPCIG00000024769) #12	ENSPCIG00000024763 #13	DDX4 (ENSPCIG00000024758) #14	SLC38A9 (ENSPCIG00000024744) #17	PLPP1 (ENSPCIG00000024736) #18	MTREX (ENSPCIG00000024730) #19	DHX29 (ENSPCIG00000024988) #20	CCNO (ENSPCIG00000037284) #21	MCIDAS (ENSPCIG00000025289) #22	GPX8 (ENSPCIG00000025291) #24	ENSPCIG00000025290 #23	GZMA (ENSPCIG00000025293) #25	ENSPCIG00000025294 #27	ENSPCIG00000019866	ENSPCIG00000037382	SNX18 (ENSPCIG00000019867) #28	HSPB3 (ENSPCIG00000019868) #29	ARL15 (ENSPCIG00000033856) #30	ENSPCIG00000022539	NDUFS4 (ENSPCIG00000019873) #31	FST (ENSPCIG00000009564) #32	MOCS2 (ENSPCIG00000019875) #33	ITGA2 (ENSPCIG00000019877) #34	ENSPCIG00000004871
Common wonbat	MODERN SPECIES	1011	ACTBL2 (ENSVURG00010021048)	GPBP1 (ENSVURG00010021055) #7	MIER3 (ENSVURG00010021075) #8	SETD9 (ENSVURG00010021083) #9	MAP3K1 (ENSVURG00010021096) #10	ENSVURG00010021121 #11	ENSVURG00010021128 #11	IL6ST (ENSVURG00010021136) #12	ENSVURG00010021146 #13	DDX4 (ENSVURG00010021159) #14	SLC38A9 (ENSVURG00010021175) #17	PLPP1 (ENSVURG00010021183) #18	MTREX (ENSVURG00010021191) #19	DHX29 (ENSVURG00010021207) #20	CCNO (ENSVURG00010021215) #21	MCIDAS (ENSVURG00010021226) #22	GPX8 (ENSVURG00010021241) #24	GZMA (ENSVURG00010021243) #25	ESM1 (ENSVURG00010021246) #27	ENSVURG00010021252	SNX18 (ENSVURG00010021264) #28	HSPB3 (ENSVURG00010021267) #29	ARL15 (ENSVURG00010021280) #30	NDUFS4 (ENSVURG00010021284) #31	FST (ENSVURG00010021290) #32	MOCS2 (ENSVURG00010021300) #33	ITGA2 (ENSVURG00010021309) #34	ITGA1 (ENSVURG00010021334) #35	PELO (ENSVURG00010021350) #36	ISL1 (ENSVURG00010000400) #37	PARP8 (ENSVURG00010000482)
Tasmanian devil	MODERN SPECIES		PLK2 (ENSSHAG00000015439)	ACTBL2 (ENSSHAG00000009237)	GPBP1 (ENSSHAG00000007122) #7	MIER3 (ENSSHAG00000002760) #8	SETD9 (ENSSHAG00000026669) #9	MAP3K1 (ENSSHAG00000010967) #10	ANKRD55 (ENSSHAG00000003251) #11	IL6ST (ENSSHAG00000010473) #12	ENSSHAG00000009936 #13	DDX4 (ENSSHAG00000009132) #14	SLC38A9 (ENSSHAG00000008259) #17	PLPP1 (ENSSHAG00000006148) #18	MTREX (ENSSHAG00000004600) #19	DHX29 (ENSSHAG00000003003) #20	CCNO (ENSSHAG00000001661) #21	MCIDAS (ENSSHAG00000029667) #22	GPX8 (ENSSHAG00000004608) #24	GZMA (ENSSHAG00000025496) #25	ESM1 (ENSSHAG00000027860) #27	ENSSHAG00000007308	SNX18 (ENSSHAG00000025261) #28	ARL15 (ENSSHAG00000012629) #30	NDUFS4 (ENSSHAG00000009761) #31	FST (ENSSHAG00000008999) #32	MOCS2 (ENSSHAG00000002698) #33	ITGA2 (ENSSHAG00000022055) #34	PELO (ENSSHAG00000023814) #36	ITGA1 (ENSSHAG00000011048) #35	ISL1 (ENSSHAG00000010608) #37	PARP8 (ENSSHAG00000001512)	ENSSHAG00000024218
Opossum	MODERN SPECIES	2	ENSMODG00000019540 #7	MIER3 (ENSMODG00000019529) #8	SETD9 (ENSMODG00000019525) #9	MAP3K1 (ENSMODG00000019524) #10	ENSMODG00000025382	ENSMODG00000048659	ANKRD55 (ENSMODG00000019520) #11	IL6ST (ENSMODG00000019517) #12	ENSMODG00000019515 #13	DDX4 (ENSMODG00000019511) #14	SLC38A9 (ENSMODG00000019505) #17	PLPP1 (ENSMODG00000019499) #18	MTREX (ENSMODG00000019494) #19	DHX29 (ENSMODG00000019487) #20	CCNO (ENSMODG00000019481) #21	MCIDAS (ENSMODG00000049862) #22	GPX8 (ENSMODG00000045617) #24	CDC20B (ENSMODG00000019478) #23	GZMA (ENSMODG00000019475) #25	ESM1 (ENSMODG00000019473) #27	ENSMODG00000019472	SNX18 (ENSMODG00000019470) #28	ENSMODG00000043169	HSPB3 (ENSMODG00000040935) #29	ARL15 (ENSMODG00000019467) #30	NDUFS4 (ENSMODG00000044297) #31	ENSMODG00000038652	FST (ENSMODG00000019463) #32	MOCS2 (ENSMODG00000019459) #33	ITGA2 (ENSMODG00000019454) #34	ITGA1 (ENSMODG00000019448) #35
Sauria	ANCESTRAL SPECIES	5	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Archelosauria	ANCESTRAL SPECIES	7	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Archosauria	ANCESTRAL SPECIES	1	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Aves	ANCESTRAL SPECIES	4	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT01030000234551.k.e	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Neognathae	ANCESTRAL SPECIES	12	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT01030000234551.k.e	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Galloanserae	ANCESTRAL SPECIES	11	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT01030000234551.k.e	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Phasianidae	ANCESTRAL SPECIES	5	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT01030000234551.k.e	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646.e #35	ENSGT00390000016326 #36
Phasianidae_b	ANCESTRAL SPECIES	5	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT01030000234551.k.e	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646.e #35	ENSGT00390000016326 #36
Chicken	MODERN SPECIES	131	PLK2 (ENSGALG00010015163)	ENSGALG00010015148 #7	MIER3 (ENSGALG00010013487) #8	SETD9 (ENSGALG00010013106) #9	MAP3K1 (ENSGALG00010013033) #10	ANKRD55 (ENSGALG00010012961) #11	IL6ST (ENSGALG00010012930) #12	ENSGALG00010015204	IL31RA (ENSGALG00010014218) #13	DDX4 (ENSGALG00010014189) #14	SLC38A9 (ENSGALG00010014167) #17	PLPP1 (ENSGALG00010014125) #18	SKIV2L2 (ENSGALG00010014041) #19	DHX29 (ENSGALG00010013953) #20	CCNO (ENSGALG00010013928) #21	MCIDAS (ENSGALG00010013421) #22	GPX8 (ENSGALG00010015118) #24	CDC20B (ENSGALG00010015114) #23	ENSGALG00010015105	GZMA (ENSGALG00010015090) #25	ESM1 (ENSGALG00010015068) #27	ENSGALG00010015054	SNX18 (ENSGALG00010015013) #28	HSPB3 (ENSGALG00010015006) #29	ARL15 (ENSGALG00010014992) #30	NDUFS4 (ENSGALG00010012578) #31	FST (ENSGALG00010012441) #32	MOCS2 (ENSGALG00010012796) #33	ITGA2 (ENSGALG00010012771) #34	ITGA1 (ENSGALG00010015624) #35	PELO (ENSGALG00010013771) #36
Japanese quail	MODERN SPECIES	699	PLK2 (ENSCJPG00005001516)	GPBP1 (ENSCJPG00005001500) #7	MIER3 (ENSCJPG00005001409) #8	SETD9 (ENSCJPG00005001402) #9	MAP3K1 (ENSCJPG00005001395) #10	ENSCJPG00005001384	ANKRD55 (ENSCJPG00005001372) #11	IL6ST (ENSCJPG00005001351) #12	IL31RA (ENSCJPG00005001341) #13	DDX4 (ENSCJPG00005001336) #14	SLC38A9 (ENSCJPG00005001322) #17	PLPP1 (ENSCJPG00005001309) #18	ENSCJPG00005001299	MTREX (ENSCJPG00005001261) #19	DHX29 (ENSCJPG00005001224) #20	MCIDAS (ENSCJPG00005001211) #22	CCNO (ENSCJPG00005001200) #21	GPX8 (ENSCJPG00005001195) #24	CDC20B (ENSCJPG00005001094) #23	GZMA (ENSCJPG00005001073) #25	ENSCJPG00005001063	ESM1 (ENSCJPG00005001058) #27	ENSCJPG00005001024	SNX18 (ENSCJPG00005000997) #28	HSPB3 (ENSCJPG00005000996) #29	ARL15 (ENSCJPG00005000935) #30	NDUFS4 (ENSCJPG00005000889) #31	FST (ENSCJPG00005011042) #32	MOCS2 (ENSCJPG00005011040) #33	ITGA2 (ENSCJPG00005011035) #34	PELO (ENSCJPG00005011033) #36
Neognathae_b	ANCESTRAL SPECIES	5	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00990000204138	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00990000211302	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Passeriformes	ANCESTRAL SPECIES	7	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a.w #7	ENSGT01030000234573.A.b.b.b.a.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928 #25	ENSGT00990000211302	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724.n #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Great tit	MODERN SPECIES	642	RAB3C (ENSPMJG00000016080)	PLK2 (ENSPMJG00000016079)	GPBP1 (ENSPMJG00000016075) #7	MIER3 (ENSPMJG00000016073) #8	SETD9 (ENSPMJG00000016072) #9	MAP3K1 (ENSPMJG00000016071) #10	ANKRD55 (ENSPMJG00000016066) #11	IL6ST (ENSPMJG00000016064) #12	IL31RA (ENSPMJG00000016063) #13	DDX4 (ENSPMJG00000015906) #14	SLC38A9 (ENSPMJG00000015904) #17	PLPP1 (ENSPMJG00000015903) #18	MTREX (ENSPMJG00000015902) #19	DHX29 (ENSPMJG00000015901) #20	CCNO (ENSPMJG00000015900) #21	MCIDAS (ENSPMJG00000015899) #22	GPX8 (ENSPMJG00000015898) #24	GZMA (ENSPMJG00000015897) #25	ESM1 (ENSPMJG00000015895) #27	ENSPMJG00000015894	SNX18 (ENSPMJG00000015891) #28	HSPB3 (ENSPMJG00000015890) #29	ARL15 (ENSPMJG00000015889) #30	NDUFS4 (ENSPMJG00000015888) #31	FST (ENSPMJG00000015887) #32	ENSPMJG00000015885	MOCS2 (ENSPMJG00000015884) #33	ITGA2 (ENSPMJG00000015883) #34	PELO (ENSPMJG00000015882) #36	ITGA1 (ENSPMJG00000015881) #35	ISL1 (ENSPMJG00000015877) #37
Australian saltwater crocodile	MODERN SPECIES	29	PLK2 (ENSCPRG00005017044)	ENSCPRG00005017038	GPBP1 (ENSCPRG00005017036) #7	MIER3 (ENSCPRG00005017032) #8	SETD9 (ENSCPRG00005017031) #9	MAP3K1 (ENSCPRG00005017015) #10	ANKRD55 (ENSCPRG00005017007) #11	IL6ST (ENSCPRG00005017002) #12	IL31RA (ENSCPRG00005016990) #13	DDX4 (ENSCPRG00005016968) #14	SLC38A9 (ENSCPRG00005016954) #17	PLPP1 (ENSCPRG00005016939) #18	MTREX (ENSCPRG00005016884) #19	DHX29 (ENSCPRG00005016856) #20	CCNO (ENSCPRG00005016853) #21	MCIDAS (ENSCPRG00005016846) #22	GPX8 (ENSCPRG00005016841) #24	CDC20B (ENSCPRG00005016828) #23	GZMA (ENSCPRG00005016805) #25	ENSCPRG00005016795 #26	ESM1 (ENSCPRG00005016789) #27	ENSCPRG00005016783	SNX18 (ENSCPRG00005016778) #28	HSPB3 (ENSCPRG00005016773) #29	ARL15 (ENSCPRG00005016769) #30	NDUFS4 (ENSCPRG00005016759) #31	FST (ENSCPRG00005016752) #32	ENSCPRG00005016743	MOCS2 (ENSCPRG00005016741) #33	ITGA2 (ENSCPRG00005016727) #34	PELO (ENSCPRG00005016719) #36
Cryptodira	ANCESTRAL SPECIES	9	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Testudinoidea	ANCESTRAL SPECIES	7	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Emydidae	ANCESTRAL SPECIES	7	ENSGT00940000158739	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Three-toed box turtle	MODERN SPECIES	29	PLK2 (ENSTMTG00000016308)	ENSTMTG00000016294	GPBP1 (ENSTMTG00000016275) #7	MIER3 (ENSTMTG00000016248) #8	SETD9 (ENSTMTG00000016230) #9	MAP3K1 (ENSTMTG00000016186) #10	ANKRD55 (ENSTMTG00000016159) #11	IL6ST (ENSTMTG00000015929) #12	IL31RA (ENSTMTG00000015868) #13	DDX4 (ENSTMTG00000015832) #14	SLC38A9 (ENSTMTG00000015807) #17	PLPP1 (ENSTMTG00000015784) #18	MTREX (ENSTMTG00000015682) #19	DHX29 (ENSTMTG00000015619) #20	CCNO (ENSTMTG00000015584) #21	MCIDAS (ENSTMTG00000015562) #22	GPX8 (ENSTMTG00000015545) #24	CDC20B (ENSTMTG00000015526) #23	GZMA (ENSTMTG00000015490) #25	ESM1 (ENSTMTG00000015468) #27	ENSTMTG00000015453	HSPB3 (ENSTMTG00000015445) #29	ARL15 (ENSTMTG00000015433) #30	NDUFS4 (ENSTMTG00000015419) #31	FST (ENSTMTG00000015410) #32	ENSTMTG00000015386	MOCS2 (ENSTMTG00000015373) #33	ITGA2 (ENSTMTG00000015168) #34	PELO (ENSTMTG00000015138) #36	ITGA1 (ENSTMTG00000015089) #35	ENSTMTG00000015079
painted turtle	MODERN SPECIES	745										DDX4 (ENSCPBG00000026547) #14	SLC38A9 (ENSCPBG00000026548) #17	PLPP1 (ENSCPBG00000026550) #18	MTREX (ENSCPBG00000026551) #19	DHX29 (ENSCPBG00000026552) #20	CCNO (ENSCPBG00000026557) #21	MCIDAS (ENSCPBG00000026558) #22	GPX8 (ENSCPBG00000026563) #24	GZMA (ENSCPBG00000026568) #25	ESM1 (ENSCPBG00000026569) #27	ENSCPBG00000026570	SNX18 (ENSCPBG00000026574) #28	SERPINB11 (ENSCPBG00000026577)	SERPINB5 (ENSCPBG00000026578)	VPS4B (ENSCPBG00000026580)	KDSR (ENSCPBG00000026581)	BCL2 (ENSCPBG00000026582)	ENSCPBG00000026584	PHLPP1 (ENSCPBG00000026585)	ZCCHC2 (ENSCPBG00000026588)	ENSCPBG00000026592	RELCH (ENSCPBG00000026599)
Testudinidae	ANCESTRAL SPECIES	30	ENSGT00950000182960.b.e.a	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00960000189528	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485.b	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Goode s thornscrub tortoise	MODERN SPECIES	20	ENSGEVG00005006316	GPBP1 (ENSGEVG00005006348) #7	MIER3 (ENSGEVG00005006390) #8	SETD9 (ENSGEVG00005006421) #9	MAP3K1 (ENSGEVG00005006502) #10	ANKRD55 (ENSGEVG00005006680) #11	ENSGEVG00005006719	IL6ST (ENSGEVG00005006744) #12	ENSGEVG00005006812 #13	DDX4 (ENSGEVG00005006846) #14	SLC38A9 (ENSGEVG00005006887) #17	PLPP1 (ENSGEVG00005006966) #18	MTREX (ENSGEVG00005007009) #19	DHX29 (ENSGEVG00005007059) #20	CCNO (ENSGEVG00005007109) #21	MCIDAS (ENSGEVG00005007134) #22	GPX8 (ENSGEVG00005007173) #24	GZMA (ENSGEVG00005007187) #25	ESM1 (ENSGEVG00005007227) #27	ENSGEVG00005007273	SNX18 (ENSGEVG00005007303) #28	HSPB3 (ENSGEVG00005007319) #29	ARL15 (ENSGEVG00005007342) #30	NDUFS4 (ENSGEVG00005007380) #31	FST (ENSGEVG00005007421) #32	ENSGEVG00005007480	MOCS2 (ENSGEVG00005007499) #33	ITGA2 (ENSGEVG00005007554) #34	ITGA1 (ENSGEVG00005007974) #35	PELO (ENSGEVG00005008056) #36	ENSGEVG00005008072
Abingdon island giant tortoise	MODERN SPECIES	2681							IL6ST (ENSCABG00000007979) #12	IL31RA (ENSCABG00000008429) #13	ENSCABG00000008435	DDX4 (ENSCABG00000008439) #14	SLC38A9 (ENSCABG00000008443) #17	PLPP1 (ENSCABG00000008448) #18	MTREX (ENSCABG00000008460) #19	DHX29 (ENSCABG00000008506) #20	CCNO (ENSCABG00000009514) #21	MCIDAS (ENSCABG00000009517) #22	GPX8 (ENSCABG00000009520) #24	CDC20B (ENSCABG00000009523) #23	GZMA (ENSCABG00000009525) #25	ESM1 (ENSCABG00000009528) #27	ENSCABG00000009531
Chinese turtle	MODERN SPECIES	2253				ENSPSIG00000007766 #10	ENSPSIG00000001661	ANKRD55 (ENSPSIG00000007227) #11	IL6ST (ENSPSIG00000017821) #12	IL31RA (ENSPSIG00000017689) #13	DDX4 (ENSPSIG00000017179) #14	SLC38A9 (ENSPSIG00000015895) #17	ENSPSIG00000015870	PLPP1 (ENSPSIG00000015862) #18	MTREX (ENSPSIG00000012150) #19	DHX29 (ENSPSIG00000011702) #20	CCNO (ENSPSIG00000011617) #21	MCIDAS (ENSPSIG00000010448) #22	GPX8 (ENSPSIG00000010421) #24	CDC20B (ENSPSIG00000009347) #23	GZMA (ENSPSIG00000008944) #25	ESM1 (ENSPSIG00000008557) #27	ENSPSIG00000006865	SNX18 (ENSPSIG00000006543) #28	HSPB3 (ENSPSIG00000001656) #29	ARL15 (ENSPSIG00000010777) #30	NDUFS4 (ENSPSIG00000010504) #31	FST (ENSPSIG00000009658) #32	MOCS2 (ENSPSIG00000008636) #33	ENSPSIG00000007843 #34	ENSPSIG00000006995 #34	ITGA1 (ENSPSIG00000005028) #35	PELO (ENSPSIG00000004971) #36
Lepidosauria	ANCESTRAL SPECIES	1	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928 #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Episquamata	ANCESTRAL SPECIES	6	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928.m.b #25	ENSGT00940000159928.m.a #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35
Toxicofera	ANCESTRAL SPECIES	18	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928.m.b #25	ENSGT00940000159928.m.a #25	ENSGT00940000159928.n #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34
Elapidae	ANCESTRAL SPECIES	19	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928.m.b #25	ENSGT00940000159928.n #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303.n.a #34	ENSGT00940000156303.m #34	ENSGT00940000157646.a #35
Elapidae_a	ANCESTRAL SPECIES	24	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A.i #11	ENSGT00950000182908.A.j #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928.m.b #25	ENSGT00940000159928.n #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303.m #34	ENSGT00940000157646.a #35	ENSGT00390000016326 #36
Acanthophiinae	ANCESTRAL SPECIES	24	ENSGT00940000155674	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A.j #11	ENSGT00940000159608 #12	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000159928.m.b #25	ENSGT00940000159928.n #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303.m #34	ENSGT00940000157646.a #35	ENSGT00390000016326 #36
Mainland tiger snake	MODERN SPECIES	33	PDE4D (ENSNSUG00000003196)	RAB3C (ENSNSUG00000003194)	PLK2 (ENSNSUG00000003144)	GPBP1 (ENSNSUG00000003139) #7	MIER3 (ENSNSUG00000003034) #8	SETD9 (ENSNSUG00000003030) #9	MAP3K1 (ENSNSUG00000003026) #10	ANKRD55 (ENSNSUG00000003003) #11	IL6ST (ENSNSUG00000002931) #12	ENSNSUG00000002929 #14	SLC38A9 (ENSNSUG00000002915) #17	PLPP1 (ENSNSUG00000002914) #18	MTREX (ENSNSUG00000002530) #19	DHX29 (ENSNSUG00000001110) #20	CCNO (ENSNSUG00000001108) #21	MCIDAS (ENSNSUG00000001106) #22	GPX8 (ENSNSUG00000001105) #24
Eastern brown snake	MODERN SPECIES	2	PDE4D (ENSPTXG00000000043)	RAB3C (ENSPTXG00000009571)	PLK2 (ENSPTXG00000009569)	GPBP1 (ENSPTXG00000009568) #7	MIER3 (ENSPTXG00000009567) #8	SETD9 (ENSPTXG00000009566) #9	MAP3K1 (ENSPTXG00000009565) #10	ANKRD55 (ENSPTXG00000009564) #11	IL6ST (ENSPTXG00000009561) #12	DDX4 (ENSPTXG00000009494) #14	SLC38A9 (ENSPTXG00000009491) #17	PLPP1 (ENSPTXG00000009490) #18	MTREX (ENSPTXG00000009489) #19	DHX29 (ENSPTXG00000009235) #20	CCNO (ENSPTXG00000009225) #21	MCIDAS (ENSPTXG00000009224) #22	GPX8 (ENSPTXG00000009223) #24	ENSPTXG00000009219 #25	ENSPTXG00000009211 #25	ESM1 (ENSPTXG00000009209) #27	ENSPTXG00000009208	SNX18 (ENSPTXG00000009207) #28	HSPB3 (ENSPTXG00000009206) #29	ARL15 (ENSPTXG00000009205) #30	NDUFS4 (ENSPTXG00000009204) #31	FST (ENSPTXG00000009203) #32	ENSPTXG00000009202	MOCS2 (ENSPTXG00000009201) #33	ITGA2 (ENSPTXG00000009069) #34	ITGA1 (ENSPTXG00000009016) #35	PELO (ENSPTXG00000009012) #36
Blue-lipped sea krait	MODERN SPECIES	5107														ENSLLTG00000009192	CCNO (ENSLLTG00000009208) #21	MCIDAS (ENSLLTG00000009213) #22
Indian cobra	MODERN SPECIES	1	ENSNNAG00000012140	PLK2 (ENSNNAG00000012193)	GPBP1 (ENSNNAG00000012245) #7	MIER3 (ENSNNAG00000012284) #8	SETD9 (ENSNNAG00000012355) #9	MAP3K1 (ENSNNAG00000012384) #10	ANKRD55 (ENSNNAG00000012479) #11	IL6ST (ENSNNAG00000012569) #12	ENSNNAG00000012854 #13	DDX4 (ENSNNAG00000012869) #14	SLC38A9 (ENSNNAG00000012884) #17	PLPP1 (ENSNNAG00000012908) #18	MTREX (ENSNNAG00000012964) #19	DHX29 (ENSNNAG00000013144) #20	CCNO (ENSNNAG00000013870) #21	MCIDAS (ENSNNAG00000013895) #22	GPX8 (ENSNNAG00000013906) #24	ENSNNAG00000013920 #25	ENSNNAG00000013946 #25	ESM1 (ENSNNAG00000013969) #27	ENSNNAG00000013983	SNX18 (ENSNNAG00000014015) #28	HSPB3 (ENSNNAG00000014044) #29	ARL15 (ENSNNAG00000014049) #30	NDUFS4 (ENSNNAG00000014068) #31	FST (ENSNNAG00000014144) #32	ENSNNAG00000014213	MOCS2 (ENSNNAG00000003667) #33	ENSNNAG00000003704 #34	ENSNNAG00000004043 #34	ITGA1 (ENSNNAG00000004098) #35
Lizard	MODERN SPECIES	1	ZBTB7C (ENSACAG00000018007)	SMAD2 (ENSACAG00000018008)	GPBP1 (ENSACAG00000014605) #7	MIER3 (ENSACAG00000028478) #8	SETD9 (ENSACAG00000014688) #9	MAP3K1 (ENSACAG00000014703) #10	ANKRD55 (ENSACAG00000014766) #11	IL6ST (ENSACAG00000014810) #12	IL31RA (ENSACAG00000014938) #13	DDX4 (ENSACAG00000014951) #14	SLC38A9 (ENSACAG00000015025) #17	PLPP1 (ENSACAG00000015109) #18	MTREX (ENSACAG00000015200) #19	DHX29 (ENSACAG00000015328) #20	CCNO (ENSACAG00000015399) #21	MCIDAS (ENSACAG00000015405) #22	CDC20B (ENSACAG00000015417) #23	GPX8 (ENSACAG00000015412) #24	ENSACAG00000015449 #25	ENSACAG00000015452 #25	ESM1 (ENSACAG00000036923) #27	SNX18 (ENSACAG00000015508) #28	HSPB3 (ENSACAG00000015513) #29	ARL15 (ENSACAG00000015517) #30	ENSACAG00000037838	NDUFS4 (ENSACAG00000015523) #31	FST (ENSACAG00000015537) #32	ENSACAG00000043812	ENSACAG00000003945	MOCS2 (ENSACAG00000008027) #33	ITGA2 (ENSACAG00000003947) #34
Laterata	ANCESTRAL SPECIES	8	ENSGT00940000157368	ENSGT00940000158739	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159928.m.a #25	ENSGT00390000018810 #27	ENSGT00940000154091.a.a	ENSGT00940000157724 #28	ENSGT00940000161247 #29	ENSGT00940000156244 #30	ENSGT00390000013835 #31	ENSGT00940000157072 #32	ENSGT00530000066485	ENSGT00510000047669 #33	ENSGT00940000156303 #34	ENSGT00940000157646 #35	ENSGT00390000016326 #36
Common wall lizard	MODERN SPECIES	2	GPBP1 (ENSPMRG00000017248) #7	MIER3 (ENSPMRG00000017238) #8	SETD9 (ENSPMRG00000017228) #9	MAP3K1 (ENSPMRG00000017217) #10	ANKRD55 (ENSPMRG00000017206) #11	IL6ST (ENSPMRG00000017199) #12	IL31RA (ENSPMRG00000017186) #13	DDX4 (ENSPMRG00000017153) #14	ENSPMRG00000017144	SLC38A9 (ENSPMRG00000017135) #17	ENSPMRG00000017084 #25	PLPP1 (ENSPMRG00000017070) #18	MTREX (ENSPMRG00000017057) #19	DHX29 (ENSPMRG00000017053) #20	CCNO (ENSPMRG00000017051) #21	MCIDAS (ENSPMRG00000017048) #22	ENSPMRG00000017045 #25	GPX8 (ENSPMRG00000017037) #24	ENSPMRG00000017026 #25	ENSPMRG00000017020 #25	ESM1 (ENSPMRG00000017014) #27	ENSPMRG00000017011	SNX18 (ENSPMRG00000017006) #28	HSPB3 (ENSPMRG00000017002) #29	ARL15 (ENSPMRG00000017000) #30	NDUFS4 (ENSPMRG00000016996) #31	FST (ENSPMRG00000016993) #32	ENSPMRG00000016985	MOCS2 (ENSPMRG00000016989) #33	ITGA2 (ENSPMRG00000016975) #34	PELO (ENSPMRG00000016968) #36
Argentine black and white tegu	MODERN SPECIES	10	PLK2 (ENSSMRG00000018948)	GPBP1 (ENSSMRG00000018947) #7	MIER3 (ENSSMRG00000018946) #8	SETD9 (ENSSMRG00000018945) #9	MAP3K1 (ENSSMRG00000018944) #10	ANKRD55 (ENSSMRG00000018943) #11	ENSSMRG00000018942	IL6ST (ENSSMRG00000018941) #12	IL31RA (ENSSMRG00000018940) #13	DDX4 (ENSSMRG00000018939) #14	SLC38A9 (ENSSMRG00000018938) #17	PLPP1 (ENSSMRG00000018937) #18	MTREX (ENSSMRG00000018936) #19	DHX29 (ENSSMRG00000018935) #20	CCNO (ENSSMRG00000018934) #21	MCIDAS (ENSSMRG00000018933) #22	GPX8 (ENSSMRG00000018932) #24	CDC20B (ENSSMRG00000018931) #23	ENSSMRG00000018930 #25	ENSSMRG00000018929 #25	ENSSMRG00000018928 #25	ENSSMRG00000018927 #25	ENSSMRG00000018926 #25	ENSSMRG00000018925 #25	ENSSMRG00000018924 #25	ESM1 (ENSSMRG00000018923) #27	ENSSMRG00000018922	SNX18 (ENSSMRG00000018920) #28	HSPB3 (ENSSMRG00000018919) #29	ARL15 (ENSSMRG00000018918) #30	NDUFS4 (ENSSMRG00000018917) #31
tuatara	MODERN SPECIES	1513	ENSSPUG00000007511	BMP6 (ENSSPUG00000007442)	TXNDC5 (ENSSPUG00000007429)	BLOC1S5 (ENSSPUG00000007421)	EEF1E1 (ENSSPUG00000007416)	SLC35B3 (ENSSPUG00000007398)	ENSSPUG00000007373 #11	ENSSPUG00000007320 #11	IL6ST (ENSSPUG00000007294) #12	IL31RA (ENSSPUG00000007279) #13	DDX4 (ENSSPUG00000007260) #14	SLC38A9 (ENSSPUG00000007124) #17	PLPP1 (ENSSPUG00000007100) #18	MTREX (ENSSPUG00000007071) #19	DHX29 (ENSSPUG00000006458) #20	MCIDAS (ENSSPUG00000006290) #22	GPX8 (ENSSPUG00000006269) #24	GZMA (ENSSPUG00000006139) #25	ESM1 (ENSSPUG00000006115) #27	SNX18 (ENSSPUG00000006109) #28	ARL15 (ENSSPUG00000006040) #30	NDUFS4 (ENSSPUG00000006012) #31	FST (ENSSPUG00000005983) #32	ENSSPUG00000005949	MOCS2 (ENSSPUG00000005936) #33	ITGA2 (ENSSPUG00000005647) #34	ITGA1 (ENSSPUG00000005560) #35	PELO (ENSSPUG00000005545) #36
Anura	ANCESTRAL SPECIES	9	ENSGT00940000165045	ENSGT00390000002743	ENSGT00420000029753.a #7	ENSGT01030000234573.A.b.b.b #8	ENSGT00390000001437 #9	ENSGT00940000159154 #10	ENSGT00950000182908.A #11	ENSGT00940000159608 #12	ENSGT00940000155603.A.b #13	ENSGT00940000157507 #14	ENSGT00390000005646 #17	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000163484
Frog	MODERN SPECIES		ENSXETG00000045262	ENSXETG00000047127	gpbp1 (ENSXETG00000015527) #7	mier3 (ENSXETG00000015520) #8	setd9 (ENSXETG00000015517) #9	map3k1 (ENSXETG00000015513) #10	ankrd55 (ENSXETG00000015510) #11	il6st (ENSXETG00000015503) #12	ddx4 (ENSXETG00000030832) #14	ENSXETG00000048995	ENSXETG00000046862	slc38a9 (ENSXETG00000028090) #17	mtrex (ENSXETG00000032798) #19	dhx29 (ENSXETG00000000367) #20	ccno (ENSXETG00000028091) #21	mcidas (ENSXETG00000033274) #22	cdc20b (ENSXETG00000031301) #23	gpx8 (ENSXETG00000028092) #24	XB5962685 [provisional:gzma] (ENSXETG00000031829)	esm1 (ENSXETG00000000364) #27	gzma (ENSXETG00000000362) #25	cspg4b (ENSXETG00000000363)	snx18 (ENSXETG00000023376) #28	HSPB3 (ENSXETG00000023377) #29	arl15 (ENSXETG00000040432) #30	ENSXETG00000041489	ENSXETG00000045735	ndufs4 (ENSXETG00000023384) #31	fst (ENSXETG00000023385) #32	ENSXETG00000046412	ENSXETG00000048200
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000007387	ENSLLEG00000007376	ENSLLEG00000007367	PDE4D (ENSLLEG00000007152)	ENSLLEG00000007106	ENSLLEG00000007093	ENSLLEG00000007060	ENSLLEG00000007040	ENSLLEG00000007032	DEPDC1B (ENSLLEG00000006877)	SLC38A9 (ENSLLEG00000006582) #17	PLPP1 (ENSLLEG00000006437) #18	MTREX (ENSLLEG00000005998) #19	ENSLLEG00000005961	DHX29 (ENSLLEG00000005665) #20	MCIDAS (ENSLLEG00000005629) #22	GPX8 (ENSLLEG00000005589) #24	CDC20B (ENSLLEG00000005547) #23	ENSLLEG00000005456	ENSLLEG00000005262 #25	ESM1 (ENSLLEG00000005223) #27	ENSLLEG00000005190	SNX18 (ENSLLEG00000005164) #28	HSPB3 (ENSLLEG00000005151) #29	ARL15 (ENSLLEG00000005040) #30	NDUFS4 (ENSLLEG00000005006) #31	FST (ENSLLEG00000004903) #32	ENSLLEG00000004886	ENSLLEG00000004884	ENSLLEG00000004874	MOCS2 (ENSLLEG00000004853) #33
Coelacanth	MODERN SPECIES	672											SLC38A9 (ENSLACG00000005509) #17	PLPP1 (ENSLACG00000008498) #18	MTREX (ENSLACG00000009075) #19	DHX29 (ENSLACG00000011195) #20	CCNO (ENSLACG00000012104) #21	MCIDAS (ENSLACG00000012171) #22	GPX8 (ENSLACG00000012964) #24	CDC20B (ENSLACG00000022348) #23	GNRHR (ENSLACG00000013490)	UBA6 (ENSLACG00000013859)	ENSLACG00000014411	ENSLACG00000014831
Actinopterygii	ANCESTRAL SPECIES	352										ENSGT01050000244968.c	ENSGT00940000156730 #18	ENSGT00940000156183 #19	ENSGT00940000157286 #20	ENSGT00990000204138	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25
Neopterygii	ANCESTRAL SPECIES	16	ENSGT00940000156437	ENSGT00390000008742	ENSGT00940000157487	ENSGT00390000002374	ENSGT00940000153434	ENSGT00940000161055	ENSGT00390000016025.a	ENSGT00940000155181	ENSGT00940000157707	ENSGT00390000002445	ENSGT00530000063675.b	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000159928 #25
Osteoglossocephalai	ANCESTRAL SPECIES	33	ENSGT00390000008742	ENSGT00940000157487	ENSGT00390000002374	ENSGT00940000153434.c.a	ENSGT00940000161055	ENSGT00390000016025.a	ENSGT00940000155181.c.a	ENSGT00940000157707	ENSGT00390000002445	ENSGT00530000063675.b	ENSGT00940000157825.b	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00510000048748	ENSGT00940000181451	ENSGT00940000166353
Osteoglossiformes	ANCESTRAL SPECIES	38	ENSGT00940000156437	ENSGT00390000008742	ENSGT00940000157487	ENSGT00390000002374	ENSGT00940000153434.c.a	ENSGT00940000161055	ENSGT00390000016025.a	ENSGT00940000155181.c.a	ENSGT00940000157707	ENSGT00390000002445	ENSGT00530000063675.b	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000156901.B	ENSGT00940000169510
Asian bonytongue	MODERN SPECIES	8	IDNK (ENSSFOG00015009211)	UBQLN2 (ENSSFOG00015027552)	gkap1 (ENSSFOG00015009231)	ENSSFOG00015009335	zgc:136564 (ENSSFOG00015028369)	hnrnpk (ENSSFOG00015009351)	rmi1 (ENSSFOG00015009426)	NTRK2 (ENSSFOG00015009438)	agtpbp1 (ENSSFOG00015009546)	naa35 (ENSSFOG00015009676)	GOLM1 (ENSSFOG00015009762)	ENSSFOG00015031575	isca1 (ENSSFOG00015009800)	TUT7 (ENSSFOG00015009813)	CCNO (ENSSFOG00015009857) #21	MCIDAS (ENSSFOG00015009885) #22	gpx8 (ENSSFOG00015030320) #24	ENSSFOG00015009922 #23	ENSSFOG00015009940	GZMA (ENSSFOG00015009953) #25	ENSSFOG00015009963	ENSSFOG00015009978	ENSSFOG00015009989	ENSSFOG00015029924	mthfd2l (ENSSFOG00015010034)	sppl3 (ENSSFOG00015010086)	GNAZ (ENSSFOG00015010124)	rsph14 (ENSSFOG00015027892)	endog (ENSSFOG00015024995)	ENSSFOG00015010146	PRRX2 (ENSSFOG00015024987)
P. kingsleyae	MODERN SPECIES	7	UBQLN1 (ENSPKIG00000021604)	gkap1 (ENSPKIG00000021632)	KIF27 (ENSPKIG00000021661)	zgc:136564 (ENSPKIG00000021683)	hnrnpk (ENSPKIG00000021705)	rmi1 (ENSPKIG00000021735)	SLC28A3 (ENSPKIG00000021746)	NTRK2 (ENSPKIG00000021781)	agtpbp1 (ENSPKIG00000021899)	naa35 (ENSPKIG00000022177)	GOLM1 (ENSPKIG00000022264)	ENSPKIG00000022284	isca1 (ENSPKIG00000022298)	TUT7 (ENSPKIG00000022326)	CCNO (ENSPKIG00000022371) #21	MCIDAS (ENSPKIG00000022388) #22	CDC20B (ENSPKIG00000022398) #23	gpx8 (ENSPKIG00000022420) #24	ENSPKIG00000022437	ENSPKIG00000022453	ENSPKIG00000022481	ENSPKIG00000022513	ncor2 (ENSPKIG00000022565)	rflna (ENSPKIG00000022634)	ccdc92 (ENSPKIG00000022660)	DTX1 (ENSPKIG00000022703)	RASAL1 (ENSPKIG00000022763)	dgcr6 (ENSPKIG00000022804)	slc7a4 (ENSPKIG00000022848)	ENSPKIG00000022869	ENSPKIG00000022872
Clupeocephala	ANCESTRAL SPECIES	404													ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00730000113053	ENSGT00940000166353	ENSGT00940000156901.B	ENSGT00940000169510
Euteleosteomorpha	ANCESTRAL SPECIES	105	ENSGT00940000156489	ENSGT00940000154886.b	ENSGT00390000015513.a.b.a	ENSGT00390000015513.a.a.b	ENSGT00940000153321.b.b	ENSGT00940000153424.a.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177226	ENSGT00940000159928 #25	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000000113.A	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28
Acanthomorphata	ANCESTRAL SPECIES	13	ENSGT00940000156489	ENSGT00940000154886.b	ENSGT00390000015513.a.b.a	ENSGT00390000015513.a.a.b	ENSGT00940000153321.b.b	ENSGT00940000153424.a.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00510000048748	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000000113.A	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Euacanthomorphacea	ANCESTRAL SPECIES	14	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a	ENSGT01100000263495.D.b.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000000113.A	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Percomorphaceae	ANCESTRAL SPECIES	2	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a	ENSGT01100000263495.D.b.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30	ENSGT00390000013835 #31
Percomorphaceae_B	ANCESTRAL SPECIES	7	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.a.a.a.b.a	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a	ENSGT01030000234576.D.a.b.a.a.a.a.a	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Ovalentaria	ANCESTRAL SPECIES	4	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Ovalentaria_B	ANCESTRAL SPECIES	9	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.s	ENSGT00940000177226	ENSGT00940000163484.t.b	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469
Cichlidae	ANCESTRAL SPECIES	6	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28
Pseudocrenilabrinae	ANCESTRAL SPECIES	11	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	8	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00940000176095.a	ENSGT00490000043385	ENSGT00940000156859.cc.a	ENSGT00940000156859.cc.b	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000163484.t.b.a	ENSGT00940000163484.t.b.b.b.b	ENSGT00940000177226.e.a.a	ENSGT00940000163484.t.b.b.b.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z
Haplochromini	ANCESTRAL SPECIES	4	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859.cc.a	ENSGT00940000156859.cc.b	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000163484.t.b.a	ENSGT00940000163484.t.b.b.b.b	ENSGT00940000177226.e.a.a	ENSGT00940000163484.t.b.b.b.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z
Burton s mouthbrooder	MODERN SPECIES	334	cenatac (ENSHBUG00000000299)	ENSHBUG00000011194	ENSHBUG00000011204	gas1a (ENSHBUG00000011217)	tars1 (ENSHBUG00000011236)	TMEM8B (ENSHBUG00000011245)	mccc2 (ENSHBUG00000000304)	ENSHBUG00000011356	psat1 (ENSHBUG00000011404)	ENSHBUG00000000313	isca1 (ENSHBUG00000011484)	ENSHBUG00000011514	ENSHBUG00000011520	ENSHBUG00000011534	CCNO (ENSHBUG00000011547) #21	MCIDAS (ENSHBUG00000011553) #22	gpx8 (ENSHBUG00000011576) #24	ENSHBUG00000011582 #23	ENSHBUG00000011642	ENSHBUG00000011704	ENSHBUG00000011741	ENSHBUG00000011766	ENSHBUG00000000323	ENSHBUG00000011821	ENSHBUG00000011834	ENSHBUG00000011839	ENSHBUG00000011849	mthfd2l (ENSHBUG00000011857)	slc20a2 (ENSHBUG00000011867)	KCMF1 (ENSHBUG00000011915)	lipg (ENSHBUG00000011980)
Haplochromini_A	ANCESTRAL SPECIES	4	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859.cc.a	ENSGT00940000156859.cc.b	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000163484.t.b.a	ENSGT00940000163484.t.b.b.b.b	ENSGT00940000177226.e.a.a	ENSGT00940000163484.t.b.b.b.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394
Haplochromini_B	ANCESTRAL SPECIES	2	ENSGT00940000159834	ENSGT00390000007799	ENSGT01100000263556.a.b.a.a.b	ENSGT01100000263495.D.b.b.c.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859.cc.a	ENSGT00940000156859.cc.b	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484.t.a	ENSGT00940000163484.t.b.b.a.a.a	ENSGT00940000163484.t.b.a	ENSGT00940000163484.t.b.b.b.b	ENSGT00940000177226.e.a.a	ENSGT00940000163484.t.b.b.b.a	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394
Eastern happy	MODERN SPECIES	3	cenatac (ENSACLG00000018726)	ENSACLG00000018707	ENSACLG00000018700	gas1a (ENSACLG00000018662)	tars1 (ENSACLG00000018603)	TMEM8B (ENSACLG00000018572)	mccc2 (ENSACLG00000018505)	ENSACLG00000018348	psat1 (ENSACLG00000018302)	ENSACLG00000018266	isca1 (ENSACLG00000018250)	ENSACLG00000018198	ENSACLG00000018179	ENSACLG00000018162	CCNO (ENSACLG00000018151) #21	ENSACLG00000018142 #22	gpx8 (ENSACLG00000018093) #24	ENSACLG00000018046	ENSACLG00000017913	ENSACLG00000017895	ENSACLG00000017832	ENSACLG00000017780	ENSACLG00000017767	ENSACLG00000017750	cacna1ba (ENSACLG00000017628)	ENSACLG00000017520	ENSACLG00000017496	ENSACLG00000017481	ENSACLG00000017469	ggt5a (ENSACLG00000017441)	ENSACLG00000017432
Nile tilapia	MODERN SPECIES	3	erap1b (ENSONIG00000016958)	naaladl1 (ENSONIG00000016966)	ENSONIG00000016973	cenatac (ENSONIG00000016975)	ENSONIG00000016979	ENSONIG00000038556	gas1a (ENSONIG00000021162)	tars1 (ENSONIG00000016982)	TMEM8B (ENSONIG00000016991)	ENSONIG00000016994	psat1 (ENSONIG00000016998)	kiss1rb (ENSONIG00000035764)	isca1 (ENSONIG00000033078)	TUT7 (ENSONIG00000017001)	CCNO (ENSONIG00000031053) #21	MCIDAS (ENSONIG00000017006) #22	ENSONIG00000039659 #23	gpx8 (ENSONIG00000017007) #24	ENSONIG00000017008	ENSONIG00000041914	ENSONIG00000017010	ENSONIG00000029334	ENSONIG00000028001	ENSONIG00000030939	ENSONIG00000014244	ENSONIG00000031917	ENSONIG00000029823	mthfd2l (ENSONIG00000014247)	slc20a2 (ENSONIG00000033863)	KCMF1 (ENSONIG00000014257)	lipg (ENSONIG00000014262)
Percomorphaceae_C	ANCESTRAL SPECIES	7	ENSGT00390000007799	ENSGT01030000234576.D.a.b.a.a.a.a.a	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.a.a.a	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.b.b	ENSGT01100000263507.E.a.b.a.a.a.a.b.a.a.a.a.a.b.a	ENSGT01100000263495.D.b.b	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Eupercaria	ANCESTRAL SPECIES	5	ENSGT00730000113167	ENSGT00650000094908	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Eupecaria_A	ANCESTRAL SPECIES	6	ENSGT00730000113167	ENSGT00650000094908	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Eupecaria_B	ANCESTRAL SPECIES	6	ENSGT00730000113167	ENSGT00650000094908	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Eupecaria_C	ANCESTRAL SPECIES	3	ENSGT00940000156044	ENSGT00940000159527	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	9	ENSGT00940000156044	ENSGT00940000159527	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00510000048748	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30	ENSGT00940000156244.b #30
European seabass	MODERN SPECIES	13	ENSDLAG00005018254	ENSDLAG00005018259	ENSDLAG00005017630	ENSDLAG00005027277	ENSDLAG00005028162	gas1a (ENSDLAG00005033220)	ENSDLAG00005016622	ENSDLAG00005016591	ENSDLAG00005015950	ENSDLAG00005014899	psat1 (ENSDLAG00005014860)	ENSDLAG00005014822	ENSDLAG00005014815	ENSDLAG00005014712	CCNO (ENSDLAG00005030683) #21	MCIDAS (ENSDLAG00005014682) #22	CDC20B (ENSDLAG00005014628) #23	ENSDLAG00005014607	GPX8 (ENSDLAG00005034782) #24	ENSDLAG00005014599	ENSDLAG00005031303	ENSDLAG00005014587	ENSDLAG00005014518	ENSDLAG00005014495	ENSDLAG00005014441	ENSDLAG00005029999	ENSDLAG00005014382	SNX18 (ENSDLAG00005014359) #28	ARL15 (ENSDLAG00005014340) #30	fsta (ENSDLAG00005026789) #32	ITGA2 (ENSDLAG00005013706) #34
Large yellow croaker	MODERN SPECIES	2	naaladl1 (ENSLCRG00005003548)	ENSLCRG00005003568	cenatac (ENSLCRG00005003570)	ENSLCRG00005003572	ENSLCRG00005003608	gas1a (ENSLCRG00005003610)	tars1 (ENSLCRG00005003633)	TMEM8B (ENSLCRG00005004005)	mccc2 (ENSLCRG00005004007)	ENSLCRG00005004126	psat1 (ENSLCRG00005009609)	kiss1rb (ENSLCRG00005009611)	isca1 (ENSLCRG00005009612)	TUT7 (ENSLCRG00005009613)	CCNO (ENSLCRG00005009678) #21	ENSLCRG00005009679 #22	gpx8 (ENSLCRG00005009681) #24	ENSLCRG00005009683	ENSLCRG00005009685	ENSLCRG00005009687	ENSLCRG00005009689	ENSLCRG00005009690	mthfd2l (ENSLCRG00005009695)	slc20a2 (ENSLCRG00005009698)	KCMF1 (ENSLCRG00005009709)	lipg (ENSLCRG00005009711)	si:dkey-193c22.1 (ENSLCRG00005009813)	ENSLCRG00005009816	SNX18 (ENSLCRG00005009817) #28	arl15a (ENSLCRG00005009818) #30	ENSLCRG00005009821
Perciformes	ANCESTRAL SPECIES	6	ENSGT00730000113167	ENSGT00650000094908	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30
Perciformes_a	ANCESTRAL SPECIES	4	ENSGT00940000156044	ENSGT00940000159527	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00510000048748	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28	ENSGT00940000156244.a.a #30	ENSGT00390000013835 #31
Channel bull blenny	MODERN SPECIES	23	cenatac (ENSCGOG00000003701)	ENSCGOG00000003694	ENSCGOG00000003691	ENSCGOG00000003674	gas1a (ENSCGOG00000003669)	tars1 (ENSCGOG00000002462)	TMEM8B (ENSCGOG00000002410)	mccc2 (ENSCGOG00000002274)	ENSCGOG00000000960	psat1 (ENSCGOG00000000900)	ENSCGOG00000000898	kiss1rb (ENSCGOG00000000894)	isca1 (ENSCGOG00000000893)	TUT7 (ENSCGOG00000000836)	CCNO (ENSCGOG00000000789) #21	MCIDAS (ENSCGOG00000000780) #22	gpx8 (ENSCGOG00000000778) #24	ENSCGOG00000000776 #23	ENSCGOG00000000774	ENSCGOG00000000773	ENSCGOG00000000772	ENSCGOG00000000771	mthfd2l (ENSCGOG00000000770)	slc20a2 (ENSCGOG00000000714)	KCMF1 (ENSCGOG00000000700)	lipg (ENSCGOG00000000621)	ENSCGOG00000000585	ENSCGOG00000000578	SNX18 (ENSCGOG00000000576) #28	arl15a (ENSCGOG00000000572) #30	ndufs4 (ENSCGOG00000000567) #31
Percomorphaceae_D	ANCESTRAL SPECIES	7	ENSGT00940000159527	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01030000234576.D.a.b.a.a.a.a.a	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00990000204138	ENSGT00940000159371 #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28
Carangaria	ANCESTRAL SPECIES	9	ENSGT00940000159527	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01030000234576.D.a.b.a.a.a.a.a	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00510000048748	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.a.a #28
Pleuronectoidei	ANCESTRAL SPECIES	34	ENSGT00940000159086	ENSGT01030000234598.b.b	ENSGT00940000159834	ENSGT00390000007799	ENSGT01030000234576.D.a.b.a.a.a.a.a	ENSGT00390000001195.a.a	ENSGT00940000154969.b	ENSGT00940000157861	ENSGT00940000155949	ENSGT01030000234519.e.a.a.a.b.f	ENSGT00940000153241.A	ENSGT01070000253744.a.a.a.a	ENSGT00490000043385	ENSGT00940000156859	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177186	ENSGT00940000163484	ENSGT00940000156724	ENSGT00940000158199	ENSGT00940000163149.a.b.c.b	ENSGT00940000157157.b.a.a	ENSGT00390000014658	ENSGT00950000182975.a.a.b.k	ENSGT00940000156880.c.b	ENSGT00940000162727.a.a	ENSGT00940000164473	ENSGT00940000153189.B	ENSGT00940000154043.A.j.a
Turbot	MODERN SPECIES	21	ENSSMAG00000008896	ENSSMAG00000008938	ENSSMAG00000008994	ENSSMAG00000009070	ENSSMAG00000009080	ENSSMAG00000009115	gas1a (ENSSMAG00000009708)	ENSSMAG00000009718	ENSSMAG00000009764	ENSSMAG00000009826	ENSSMAG00000009903	psat1 (ENSSMAG00000009987)	ENSSMAG00000010030	ENSSMAG00000010045	CCNO (ENSSMAG00000010071) #21	MCIDAS (ENSSMAG00000010075) #22	CDC20B (ENSSMAG00000010086) #23	GPX8 (ENSSMAG00000010103) #24	ENSSMAG00000010124	ENSSMAG00000010141	ENSSMAG00000010152	ENSSMAG00000010218	ENSSMAG00000010244	notch1b (ENSSMAG00000010263)	UBAC1 (ENSSMAG00000010580)	ENSSMAG00000010639	camsap1b (ENSSMAG00000010651)	KCNT1 (ENSSMAG00000010757)	ENSSMAG00000011180	ENSSMAG00000011191	ENSSMAG00000025930
Cod	MODERN SPECIES	2	etsrp (ENSGMOG00000037126)	ENSGMOG00000023368	ENSGMOG00000026402	pycard (ENSGMOG00000031731)	pycard (ENSGMOG00000022505)	ENSGMOG00000029056	si:ch211-225p5.8 (ENSGMOG00000006740)	ENSGMOG00000029447	scn1ba (ENSGMOG00000017290)	psmc4 (ENSGMOG00000017297)	ENSGMOG00000035070	ENSGMOG00000017469	ENSGMOG00000017557	ENSGMOG00000022641	CCNO (ENSGMOG00000029582) #21	MCIDAS (ENSGMOG00000001405) #22	CDC20B (ENSGMOG00000026554) #23	GPX8 (ENSGMOG00000002624) #24	ENSGMOG00000002591	ENSGMOG00000022529	ENSGMOG00000025132	ENSGMOG00000005510	ENSGMOG00000029955	ENSGMOG00000002537	ENSGMOG00000025026	ENSGMOG00000034529	ENSGMOG00000004609	ENSGMOG00000028895	ENSGMOG00000007459	lipg (ENSGMOG00000007449)	ENSGMOG00000007426
Protacanthopterygii	ANCESTRAL SPECIES	97					ENSGT01000000214878	ENSGT00940000157298	ENSGT00940000162168	ENSGT00940000163761	ENSGT00940000159174.f	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320.c	ENSGT00940000155291.a	ENSGT00940000157548	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00950000183104.A.a.b #23	ENSGT00940000159371 #24	ENSGT00940000177226	ENSGT00940000159928 #25	ENSGT00940000156901.B	ENSGT00940000169510	ENSGT00730000113053	ENSGT00940000166353	ENSGT00390000000113.A.a.a	ENSGT00390000014879.c.b	ENSGT00510000047171.z	ENSGT00940000159394	ENSGT00500000045469	ENSGT00940000154091.a.a.s.a	ENSGT00940000157724.b #28
Salmoninae	ANCESTRAL SPECIES	965													ENSGT00940000156320.c.c.a	ENSGT00940000157548.q.a	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371.m #24	ENSGT00950000183104.A.a.b #23
Salmoninae_a	ANCESTRAL SPECIES	113	ENSGT00390000002575	ENSGT00940000160018.n	ENSGT00990000204357	ENSGT00940000156516	ENSGT00940000158884	ENSGT01060000253410	ENSGT01000000214878.e.b	ENSGT00940000157298.n	ENSGT00940000162168	ENSGT00940000163761.i	ENSGT00940000158449.e.b	ENSGT00890000139463.b.b.b.f.b	ENSGT00940000156320.c.d	ENSGT00940000157548.q.a	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371.m #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159394.h	ENSGT00510000047171.z.d	ENSGT00390000014879.c.b.d.a.b.a	ENSGT00940000155816.b.g.a	ENSGT00940000158223.i	ENSGT00940000155680.d.`b.b	ENSGT00940000154091.a.a.s.a.c	ENSGT00940000157724.b.b.b #28	ENSGT00940000161247 #29	ENSGT00940000157072.b.a.b #32	ENSGT00940000153731.a.a.k.b #37	ENSGT00950000183129.b.a.c	ENSGT00940000157749.w.a
Salmo	ANCESTRAL SPECIES	85	ENSGT00390000002575	ENSGT00940000160018.n	ENSGT00940000156516	ENSGT00990000204357	ENSGT00940000158884	ENSGT01060000253410	ENSGT01000000214878.e.b.b	ENSGT00940000157298.n	ENSGT00940000162168.q	ENSGT00940000163761.i	ENSGT00940000158449.e.b	ENSGT00890000139463.b.b.b.f.b	ENSGT00940000156320.c.d	ENSGT00940000157548.q.a	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371.m #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159394.h	ENSGT00510000047171.z.d	ENSGT00390000014879.c.b.c	ENSGT00730000113053.a	ENSGT00940000169510	ENSGT00940000156901.B.a	ENSGT00940000157845.f	ENSGT01090000260468.a	ENSGT00940000155816.b.g.a	ENSGT00940000158223.i	ENSGT00940000155680.d.`b.b	ENSGT00940000154091.a.a.s.a.c	ENSGT00940000157724.b.b.b #28
River trout	MODERN SPECIES	19	ENSSTUG00000004235	ENSSTUG00000004243	ENSSTUG00000004265	ENSSTUG00000004297	ENSSTUG00000004302	ENSSTUG00000004311	cnot6l (ENSSTUG00000004336)	ENSSTUG00000004395	mrpl1 (ENSSTUG00000004402)	fras1 (ENSSTUG00000004652)	fgf5 (ENSSTUG00000006553)	prdm8b (ENSSTUG00000006568)	antxr2a (ENSSTUG00000006579)	bmp2k (ENSSTUG00000006623)	CCNO (ENSSTUG00000006653) #21	ENSSTUG00000006736 #22	gpx8 (ENSSTUG00000006748) #24	CDC20B (ENSSTUG00000006767) #23	lipg (ENSSTUG00000006832)	ENSSTUG00000007107	KCMF1 (ENSSTUG00000007115)	slc20a2 (ENSSTUG00000007136)	ENSSTUG00000007142	ENSSTUG00000007147	ENSSTUG00000007157	ENSSTUG00000007175	ENSSTUG00000007184	NOD1 (ENSSTUG00000007192)	ENSSTUG00000007233	ENSSTUG00000007243	WDFY3 (ENSSTUG00000007475)
Atlantic salmon	MODERN SPECIES	16	ENSSSAG00000115022	ENSSSAG00000087881	ENSSSAG00000071584	ENSSSAG00000103305	cnot6l (ENSSSAG00000092108)	ENSSSAG00000071567	fras1 (ENSSSAG00000053053)	ENSSSAG00000088603	ENSSSAG00000105033	fgf5 (ENSSSAG00000096652)	prdm8b (ENSSSAG00000053004)	antxr2a (ENSSSAG00000116038)	ENSSSAG00000120097	bmp2k (ENSSSAG00000053206)	ENSSSAG00000103697 #21	MCIDAS (ENSSSAG00000098117) #22	CDC20B (ENSSSAG00000053336) #23	GPX8 (ENSSSAG00000090378) #24	ENSSSAG00000053486	ENSSSAG00000116569	ENSSSAG00000086471	ENSSSAG00000117621	ENSSSAG00000104894	ENSSSAG00000053589	ENSSSAG00000053429	ENSSSAG00000099408	ENSSSAG00000053392	ENSSSAG00000118933	ENSSSAG00000053614	ENSSSAG00000113405	ENSSSAG00000084816
Oncorhynchus	ANCESTRAL SPECIES	77	ENSGT00940000160018.n	ENSGT00990000204357	ENSGT00940000156516	ENSGT00940000158884	ENSGT01060000253410	ENSGT01000000214878.e.b	ENSGT00940000157298.n	ENSGT00940000162168	ENSGT00940000163761.i	ENSGT00940000158449.e.b	ENSGT00890000139463.b.b.b.f.b	ENSGT00940000156320.c.d	ENSGT00940000156320.c.c.a	ENSGT00940000157548.q.a	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371.m #24	ENSGT00950000183104.A.a.b #23	ENSGT00940000159394.h	ENSGT00510000047171.z.d	ENSGT00390000014879.c.b.d.a.b.a	ENSGT00940000156901.B.a	ENSGT00940000155816.b.g.a	ENSGT00940000158223.i	ENSGT00940000154091.a.a.s.a.c	ENSGT00940000157724.b.b.b #28	ENSGT00940000161247 #29	ENSGT00940000157072.b.a.b #32	ENSGT00940000153731.a.a.k.b #37	ENSGT00950000183129.b.a.c	ENSGT00940000157749.w.a
Oncorhynchus_a	ANCESTRAL SPECIES	87	ENSGT00940000153654.`f.a.b.a	ENSGT00390000002575	ENSGT00940000160018.n	ENSGT00990000204357	ENSGT00940000156516	ENSGT00940000158884	ENSGT01000000214878.e.b	ENSGT00940000157298.n	ENSGT00940000162168	ENSGT00940000163761.i	ENSGT00940000158449.e.b	ENSGT00890000139463.b.b.b.f.b	ENSGT00940000156320.c.c.a	ENSGT00940000157548.q.a	ENSGT00940000155998 #21	ENSGT00940000153270.b.a #22	ENSGT00940000159371.m #24	ENSGT00940000159394.h	ENSGT00510000047171.z.d	ENSGT00390000014879.c.b.d.a.b.a	ENSGT00730000113053.a	ENSGT00510000048748	ENSGT00940000156901.B.a	ENSGT00940000155816.b.g.a	ENSGT00940000158223.i	ENSGT00940000154091.a.a.s.a.c	ENSGT00940000157724.b.b.b #28	ENSGT00940000161247 #29	ENSGT00950000183129.b.a.c	ENSGT00940000157749.w.a	ENSGT00390000007153.a.a.a.o.a
Coho salmon	MODERN SPECIES	22	ENSOKIG00005001613	ENSOKIG00005001611	ENSOKIG00005001605	ENSOKIG00005001600	ENSOKIG00005001593	cnot6l (ENSOKIG00005001580)	ENSOKIG00005001575	mrpl1 (ENSOKIG00005001570)	fras1 (ENSOKIG00005001406)	fgf5 (ENSOKIG00005001366)	prdm8b (ENSOKIG00005001364)	ENSOKIG00005001360	antxr2a (ENSOKIG00005001351)	bmp2k (ENSOKIG00005001340)	CCNO (ENSOKIG00005001336) #21	ENSOKIG00005001334 #22	gpx8 (ENSOKIG00005001327) #24	ENSOKIG00005001286	ENSOKIG00005001250	ENSOKIG00005001241	lipg (ENSOKIG00005001220)	KCMF1 (ENSOKIG00005001209)	ENSOKIG00005001171	ENSOKIG00005001153	ENSOKIG00005001147	ENSOKIG00005001142	ENSOKIG00005001129	ENSOKIG00005001120	RASGEF1B (ENSOKIG00005001074)	ENSOKIG00005000960	ENSOKIG00005000915
Rainbow trout	MODERN SPECIES	27	ENSOMYG00000039860	ENSOMYG00000001262	ENSOMYG00000072096	ENSOMYG00000050245	ENSOMYG00000074516	ENSOMYG00000072498	ENSOMYG00000069185	fgf5 (ENSOMYG00000053332)	prdm8b (ENSOMYG00000001176)	antxr2a (ENSOMYG00000061375)	ENSOMYG00000073003	ENSOMYG00000050219	ENSOMYG00000028091	bmp2k (ENSOMYG00000032591)	CCNO (ENSOMYG00000032626) #21	ENSOMYG00000032652 #22	GPX8 (ENSOMYG00000032660) #24	CDC20B (ENSOMYG00000055342) #23	ENSOMYG00000055213	ENSOMYG00000032145	ENSOMYG00000063869	ENSOMYG00000048447	ENSOMYG00000074126	ENSOMYG00000032562	ENSOMYG00000057745	ENSOMYG00000032574	ENSOMYG00000057194	ENSOMYG00000032068	ENSOMYG00000032059	ENSOMYG00000057583	ENSOMYG00000071072
Huchen	MODERN SPECIES	4552															CCNO (ENSHHUG00000039959) #21	ENSHHUG00000039948 #22	gpx8 (ENSHHUG00000039941) #24	ENSHHUG00000039938	CDC20B (ENSHHUG00000039933) #23	ENSHHUG00000039930
Northern pike	MODERN SPECIES	12	cfap299 (ENSELUG00000013164)	ENSELUG00000013150	EEF2 (ENSELUG00000013203)	pias2 (ENSELUG00000013232)	ENSELUG00000001269	cnot6l (ENSELUG00000013353)	mrpl1 (ENSELUG00000013391)	ENSELUG00000025556	anxa3 (ENSELUG00000013648)	fgf5 (ENSELUG00000013670)	prdm8b (ENSELUG00000013680)	antxr2a (ENSELUG00000013774)	paqr3a (ENSELUG00000013818)	bmp2k (ENSELUG00000013888)	CCNO (ENSELUG00000013902) #21	MCIDAS (ENSELUG00000013917) #22	CDC20B (ENSELUG00000025013) #23	gpx8 (ENSELUG00000013928) #24	ENSELUG00000032932	ENSELUG00000013958	ENSELUG00000013977	ENSELUG00000014082	ENSELUG00000014178	tal2 (ENSELUG00000001638)	zgc:152968 (ENSELUG00000014272)	RAB27B (ENSELUG00000031156)	ST8SIA3 (ENSELUG00000014364)	ENSELUG00000014400	zgc:158260 (ENSELUG00000014435)	scarb2a (ENSELUG00000014501)	PPEF2 (ENSELUG00000014522)
Spotted gar	MODERN SPECIES	658	IDNK (ENSLOCG00000002152)	UBQLN1 (ENSLOCG00000002171)	gkap1 (ENSLOCG00000002195)	KIF27 (ENSLOCG00000002225)	zgc:136564 (ENSLOCG00000002249)	hnrpkl (ENSLOCG00000002262)	rmi1 (ENSLOCG00000017966)	ntrk2b (ENSLOCG00000002294)	agtpbp1 (ENSLOCG00000002341)	naa35 (ENSLOCG00000002381)	GOLM1 (ENSLOCG00000002400)	ENSLOCG00000002431	isca1 (ENSLOCG00000002455)	TUT7 (ENSLOCG00000002472)	CCNO (ENSLOCG00000002485) #21	MCIDAS (ENSLOCG00000002514) #22	CDC20B (ENSLOCG00000002543) #23	gpx8 (ENSLOCG00000002554) #24	ENSLOCG00000002567 #25	si:busm1-57f23.1 (ENSLOCG00000002595)	rassf6 (ENSLOCG00000002613)	MUSK (ENSLOCG00000002642)	lpar1 (ENSLOCG00000002675)	EPHA5 (ENSLOCG00000002688)	ENSLOCG00000002724	GRIN3A (ENSLOCG00000002735)	PLPPR1 (ENSLOCG00000002781)	ENSLOCG00000002806	ENSLOCG00000002822	palm2akap2 (ENSLOCG00000002841)	SLC46A2 (ENSLOCG00000002855)
Reedfish	MODERN SPECIES	13	slc26a1 (ENSECRG00000001008)	zgc:86764 (ENSECRG00000001213)	ENSECRG00000001655	dusp4 (ENSECRG00000001681)	tnksb (ENSECRG00000001723)	ppp1r3b (ENSECRG00000001881)	eri1 (ENSECRG00000001891)	MFHAS1 (ENSECRG00000001905)	slc20a2 (ENSECRG00000001951)	kcmf1 (ENSECRG00000002037)	CSGALNACT1 (ENSECRG00000002074)	PLPP1 (ENSECRG00000002140) #18	mtrex (ENSECRG00000002216) #19	DHX29 (ENSECRG00000002278) #20	CCNO (ENSECRG00000002313) #21	MCIDAS (ENSECRG00000002321) #22	gpx8 (ENSECRG00000002335) #24	CDC20B (ENSECRG00000002403) #23	ENSECRG00000002945	ENSECRG00000002965	ENSECRG00000002977	ENSECRG00000002988	ENSECRG00000003026	ENSECRG00000003089	ENSECRG00000003195	GZMA (ENSECRG00000003924) #25	ENSECRG00000003944	GZMA (ENSECRG00000003963) #25	GZMA (ENSECRG00000003969) #25	GZMA (ENSECRG00000003979) #25	ENSECRG00000003989