Amniota	ANCESTRAL SPECIES	7	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Mammalia	ANCESTRAL SPECIES	4	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Theria	ANCESTRAL SPECIES		ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Eutheria	ANCESTRAL SPECIES	1	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Boreoeutheria	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Euarchontoglires	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Euarchontoglires_A	ANCESTRAL SPECIES	23	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Glires	ANCESTRAL SPECIES	24	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Rodentia	ANCESTRAL SPECIES	12	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a
Rodentia_A	ANCESTRAL SPECIES	12	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Hystricomorpha	ANCESTRAL SPECIES	14	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Naked mole-rat female	MODERN SPECIES	5	ENSHGLG00000016313 #7	ENSHGLG00000016355 #8	ENSHGLG00000045090 #9	TOMM7 (ENSHGLG00000006840) #10	ENSHGLG00000007816 #11	ENSHGLG00000020842 #12	ENSHGLG00000020692 #13	RAPGEF5 (ENSHGLG00000013551) #14	CDCA7L (ENSHGLG00000005237) #15	ENSHGLG00000043520 #16	DNAH11 (ENSHGLG00000014062) #17	SP4 (ENSHGLG00000014842) #18	SP8 (ENSHGLG00000041939) #19	ENSHGLG00000007430 #20	ITGB8 (ENSHGLG00000009109) #21	MACC1 (ENSHGLG00000005625) #22	ENSHGLG00000040956 #23	TMEM196 (ENSHGLG00000035074) #24	POLR1F (ENSHGLG00000010976) #25	FERD3L (ENSHGLG00000036051) #26	ENSHGLG00000033404 #27	HDAC9 (ENSHGLG00000019023) #28	PRPS1L1 (ENSHGLG00000021217) #29	SNX13 (ENSHGLG00000018267) #30	ENSHGLG00000035349 #31	AHR (ENSHGLG00000006373) #32	TSPAN13 (ENSHGLG00000010631) #33	AGR2 (ENSHGLG00000042591) #34	BZW2 (ENSHGLG00000011038) #35	ANKMY2 (ENSHGLG00000037184) #36	ENSHGLG00000009473 #37
Hystricomorpha_a	ANCESTRAL SPECIES	41	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000166044	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Hystricomorpha_b	ANCESTRAL SPECIES	39	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000166044	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Long-tailed chinchilla	MODERN SPECIES	117	IGF2BP3 (ENSCLAG00000009835)	MALSU1 (ENSCLAG00000008469)	GPNMB (ENSCLAG00000004706)	NUP42 (ENSCLAG00000007547)	KLHL7 (ENSCLAG00000007077)	HYCC1 (ENSCLAG00000008734) #8	TOMM7 (ENSCLAG00000009880) #10	ENSCLAG00000009385	RAPGEF5 (ENSCLAG00000009347) #14	CDCA7L (ENSCLAG00000007779) #15	DNAH11 (ENSCLAG00000007590) #17	SP4 (ENSCLAG00000013285) #18	SP8 (ENSCLAG00000013238) #19	ABCB5 (ENSCLAG00000012805) #20	ITGB8 (ENSCLAG00000006980) #21	MACC1 (ENSCLAG00000005944) #22	TMEM196 (ENSCLAG00000013947) #24	POLR1F (ENSCLAG00000012696) #25	FERD3L (ENSCLAG00000017792) #26	HDAC9 (ENSCLAG00000007911) #28	SNX13 (ENSCLAG00000005253) #30	AHR (ENSCLAG00000005612) #32	AGR2 (ENSCLAG00000005464) #34	TSPAN13 (ENSCLAG00000012606) #33	BZW2 (ENSCLAG00000011809) #35	ANKMY2 (ENSCLAG00000010313) #36	ENSCLAG00000010495 #37	SOSTDC1 (ENSCLAG00000009096)	CRPPA (ENSCLAG00000008000)	MEOX2 (ENSCLAG00000007831)	DGKB (ENSCLAG00000011522)
Degu	MODERN SPECIES	56	CCDC126 (ENSODEG00000009592)	ENSODEG00000009301	TRA2A (ENSODEG00000008335)	ENSODEG00000011195	MALSU1 (ENSODEG00000008210)	GPNMB (ENSODEG00000007447)	KLHL7 (ENSODEG00000007276)	HYCC1 (ENSODEG00000008398) #8	RAPGEF5 (ENSODEG00000007375) #14	CDCA7L (ENSODEG00000006644) #15	DNAH11 (ENSODEG00000010213) #17	SP4 (ENSODEG00000007953) #18	SP8 (ENSODEG00000007393) #19	ABCB5 (ENSODEG00000009297) #20	ITGB8 (ENSODEG00000006123) #21	MACC1 (ENSODEG00000006372) #22	ENSODEG00000006740	POLR1F (ENSODEG00000007222) #25	FERD3L (ENSODEG00000019445) #26	TWIST1 (ENSODEG00000008450) #27	ENSODEG00000007765	PRPS1L1 (ENSODEG00000019429) #29	ENSODEG00000007366	SNX13 (ENSODEG00000007084) #30	ENSODEG00000019583	AHR (ENSODEG00000006823) #32	ENSODEG00000008143	AGR2 (ENSODEG00000006586) #34	ENSODEG00000007541 #33	BZW2 (ENSODEG00000007505) #35	ANKMY2 (ENSODEG00000008716) #36
Guinea pig	MODERN SPECIES	31								RAPGEF5 (ENSCPOG00000003046) #14	CDCA7L (ENSCPOG00000003655) #15	DNAH11 (ENSCPOG00000003632) #17	SP4 (ENSCPOG00000015154) #18	ENSCPOG00000007612	SP8 (ENSCPOG00000026910) #19	ABCB5 (ENSCPOG00000002896) #20	ITGB8 (ENSCPOG00000009110) #21	MACC1 (ENSCPOG00000003007) #22	TMEM196 (ENSCPOG00000013556) #24	POLR1F (ENSCPOG00000031651) #25	HDAC9 (ENSCPOG00000005468) #28	PRPS1L1 (ENSCPOG00000008036) #29	SNX13 (ENSCPOG00000009570) #30	AHR (ENSCPOG00000005481) #32	AGR2 (ENSCPOG00000000018) #34	TSPAN13 (ENSCPOG00000034690) #33	BZW2 (ENSCPOG00000011515) #35	ANKMY2 (ENSCPOG00000011512) #36	ENSCPOG00000011510 #37	SOSTDC1 (ENSCPOG00000034288)	ENSCPOG00000000910	CRPPA (ENSCPOG00000023248)	MEOX2 (ENSCPOG00000026227)
Sciuridae	ANCESTRAL SPECIES	7	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Marmotini	ANCESTRAL SPECIES	84									ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Marmotini_b	ANCESTRAL SPECIES	125									ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Arctic ground squirrel	MODERN SPECIES	13									RAPGEF5 (ENSUPAG00010013100) #14	CDCA7L (ENSUPAG00010013062) #15	DNAH11 (ENSUPAG00010012960) #17	SP4 (ENSUPAG00010012934) #18	SP8 (ENSUPAG00010012923) #19	ABCB5 (ENSUPAG00010012875) #20	ITGB8 (ENSUPAG00010012852) #21	MACC1 (ENSUPAG00010012815) #22	ENSUPAG00010012807	POLR1F (ENSUPAG00010012802) #25	FERD3L (ENSUPAG00010012798) #26	TWIST1 (ENSUPAG00010012792) #27	HDAC9 (ENSUPAG00010012420) #28	PRPS1L1 (ENSUPAG00010012410) #29	SNX13 (ENSUPAG00010012364) #30	AHR (ENSUPAG00010012350) #32	AGR3 (ENSUPAG00010012339) ##34	AGR2 (ENSUPAG00010012328) #34	TSPAN13 (ENSUPAG00010012320) #33	BZW2 (ENSUPAG00010012281) #35	ANKMY2 (ENSUPAG00010012270) #36	ENSUPAG00010012260 #37	SOSTDC1 (ENSUPAG00010012255)
Squirrel	MODERN SPECIES	146									RAPGEF5 (ENSSTOG00000026745) #14	CDCA7L (ENSSTOG00000010398) #15	DNAH11 (ENSSTOG00000010333) #17	SP4 (ENSSTOG00000010326) #18	SP8 (ENSSTOG00000028058) #19	ABCB5 (ENSSTOG00000027737) #20	ITGB8 (ENSSTOG00000016396) #21	MACC1 (ENSSTOG00000015506) #22	ENSSTOG00000031600	ENSSTOG00000032072	TMEM196 (ENSSTOG00000027635) #24	POLR1F (ENSSTOG00000022702) #25	FERD3L (ENSSTOG00000025739) #26	TWIST1 (ENSSTOG00000032264) #27	HDAC9 (ENSSTOG00000001518) #28	SNX13 (ENSSTOG00000001983) #30	AHR (ENSSTOG00000003086) #32	AGR3 (ENSSTOG00000028440) ##34	AGR2 (ENSSTOG00000008843) #34	TSPAN13 (ENSSTOG00000008833) #33	BZW2 (ENSSTOG00000002506) #35	ANKMY2 (ENSSTOG00000002497) #36	LRRC72 (ENSSTOG00000027999)
Alpin marmot	MODERN SPECIES	51									RAPGEF5 (ENSMMMG00000015646) #14	CDCA7L (ENSMMMG00000015620) #15	DNAH11 (ENSMMMG00000015540) #17	SP4 (ENSMMMG00000015532) #18	SP8 (ENSMMMG00000015521) #19	ENSMMMG00000015513 #20	ITGB8 (ENSMMMG00000015498) #21	MACC1 (ENSMMMG00000015478) #22	ENSMMMG00000015455	POLR1F (ENSMMMG00000015448) #25	FERD3L (ENSMMMG00000015442) #26	TWIST1 (ENSMMMG00000015432) #27	HDAC9 (ENSMMMG00000015175) #28	PRPS1L1 (ENSMMMG00000015155) #29	SNX13 (ENSMMMG00000015118) #30	AHR (ENSMMMG00000015102) #32	AGR3 (ENSMMMG00000015096) ##34	AGR2 (ENSMMMG00000015076) #34	TSPAN13 (ENSMMMG00000015067) #33	BZW2 (ENSMMMG00000015053) #35	ANKMY2 (ENSMMMG00000015031) #36	ENSMMMG00000015026	ENSMMMG00000015021
Eurasian red squirrel	MODERN SPECIES	17	NUP42 (ENSSVLG00005019028)	ENSSVLG00005018885	ENSSVLG00005018849	HYCC1 (ENSSVLG00005018797) #8	ENSSVLG00005018594 #9	TOMM7 (ENSSVLG00005018533) #10	ENSSVLG00005018453 #11	RAPGEF5 (ENSSVLG00005017502) #14	CDCA7L (ENSSVLG00005017354) #15	ENSSVLG00005017283	DNAH11 (ENSSVLG00005015034) #17	SP4 (ENSSVLG00005014734) #18	SP8 (ENSSVLG00005014678) #19	ABCB5 (ENSSVLG00005014277) #20	ITGB8 (ENSSVLG00005013971) #21	MACC1 (ENSSVLG00005013888) #22	ENSSVLG00005013765	TMEM196 (ENSSVLG00005013673) #24	POLR1F (ENSSVLG00005013559) #25	ENSSVLG00005013439	FERD3L (ENSSVLG00005013395) #26	TWIST1 (ENSSVLG00005013248) #27	ENSSVLG00005013183	HDAC9 (ENSSVLG00005012221) #28	PRPS1L1 (ENSSVLG00005012063) #29	ENSSVLG00005011929 #30	ENSSVLG00005011888	ENSSVLG00005011843	AHR (ENSSVLG00005011696) #32	AGR3 (ENSSVLG00005011538) ##34	AGR2 (ENSSVLG00005011419) #34
Rodentia_B	ANCESTRAL SPECIES	9	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Myomorpha	ANCESTRAL SPECIES	8	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00940000154486.a.a.b ##32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a
Muroidea	ANCESTRAL SPECIES	8	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00940000154486.a.a.b ##32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a
Muroidea_A	ANCESTRAL SPECIES	15	ENSGT01030000234536.b.b.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b	ENSGT00940000154411.`b.i.f.jc.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Cricetidae	ANCESTRAL SPECIES	17	ENSGT01050000244871.a.a.c.b.a.a.a.s	ENSGT01030000234536.b.b.b.m.b	ENSGT00940000154411.`b.i.f.jc.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Cricetinae	ANCESTRAL SPECIES	62			ENSGT00940000154411.`b.i.f.jc.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Chinese hamster chok1gshd	MODERN SPECIES	251	Serpina11 (ENSCGRG00001017752)	ENSCGRG00001016854	ENSCGRG00001013015	Serpina6 (ENSCGRG00001011122)	Serpina10 (ENSCGRG00001010214)	Ppp4r4 (ENSCGRG00001011779)	ENSCGRG00001008114	ENSCGRG00001022623	Rapgef5 (ENSCGRG00001019381) #14	Cdca7l (ENSCGRG00001014444) #15	Dnah11 (ENSCGRG00001020590) #17	Sp4 (ENSCGRG00001021046) #18	Sp8 (ENSCGRG00001016188) #19	Abcb5 (ENSCGRG00001017932) #20	Itgb8 (ENSCGRG00001010627) #21	Macc1 (ENSCGRG00001006694) #22	Tmem196 (ENSCGRG00001024227)
Golden Hamster	MODERN SPECIES	786			ENSMAUG00000006032	Vipr2 (ENSMAUG00000006692)	Dync2i1 (ENSMAUG00000007405)	Esyt2 (ENSMAUG00000009011)	Ncapg2 (ENSMAUG00000009370)	ENSMAUG00000009615 #14	Cdca7l (ENSMAUG00000010583) #15	Dnah11 (ENSMAUG00000010352) #17	Sp4 (ENSMAUG00000016400) #18	Sp8 (ENSMAUG00000016898) #19	Abcb5 (ENSMAUG00000013511) #20	ENSMAUG00000018272	Itgb8 (ENSMAUG00000000108) #21	Macc1 (ENSMAUG00000014905) #22	Tmem196 (ENSMAUG00000015322)
Cricetidae_B	ANCESTRAL SPECIES	18	ENSGT00940000166360	ENSGT00940000161491.d	ENSGT00940000153165.a.a.c.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Northern American deer mouse	MODERN SPECIES	5	Zfp386 (ENSPEMG00000024076)	Vipr2 (ENSPEMG00000023142)	Dync2i1 (ENSPEMG00000023457)	Esyt2 (ENSPEMG00000023634)	Ncapg2 (ENSPEMG00000022912)	Ptprn2 (ENSPEMG00000021727)	ENSPEMG00000025190	Rapgef5 (ENSPEMG00000021786) #14	Cdca7l (ENSPEMG00000014266) #15	Dnah11 (ENSPEMG00000022658) #17	Sp4 (ENSPEMG00000021781) #18	Sp8 (ENSPEMG00000022432) #19	Abcb5 (ENSPEMG00000022832) #20	ENSPEMG00000025194	Itgb8 (ENSPEMG00000021722) #21	Macc1 (ENSPEMG00000021443) #22	ENSPEMG00000024099	Tmem196 (ENSPEMG00000026386)
Prairie vole	MODERN SPECIES		ENSMOCG00000016119	Vipr2 (ENSMOCG00000018122)	Dync2i1 (ENSMOCG00000017481)	Esyt2 (ENSMOCG00000000676)	Ncapg2 (ENSMOCG00000022899)	Ptprn2 (ENSMOCG00000015064)	ENSMOCG00000001797	Rapgef5 (ENSMOCG00000008682) #14	Cdca7l (ENSMOCG00000017529) #15	Dnah11 (ENSMOCG00000015979) #17	Sp4 (ENSMOCG00000016482) #18	ENSMOCG00000022665	Sp8 (ENSMOCG00000004492) #19	ENSMOCG00000005454	Itgb8 (ENSMOCG00000005666) #21	Macc1 (ENSMOCG00000010286) #22	Tmem196 (ENSMOCG00000014000)	Pnn (ENSMOCG00000004573)	ENSMOCG00000003083	Gemin2 (ENSMOCG00000023031)	Sec23a (ENSMOCG00000004697)	ENSMOCG00000015761	Clec14a (ENSMOCG00000001508)	Sstr1 (ENSMOCG00000018730)	ENSMOCG00000008283	ENSMOCG00000013226	Foxa1 (ENSMOCG00000012361)	Mipol1 (ENSMOCG00000016950)	Slc25a21 (ENSMOCG00000013167)	Pax9 (ENSMOCG00000008657)	Nkx2-9 (ENSMOCG00000017035)
Murinae	ANCESTRAL SPECIES	8	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b	ENSGT01030000234536.b.b.b.o.b	ENSGT00940000154411.`b.i.f.jc.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Mus	ANCESTRAL SPECIES	10	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b.a	ENSGT00940000153165.a.a.c.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Mus_A	ANCESTRAL SPECIES	17	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.b.b	ENSGT01030000234536.b.b.b.o.b	ENSGT00940000154411.`b.i.f.jc.a	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Mus_B	ANCESTRAL SPECIES	17	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.a.b.a.b.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b.d.b.a.a	ENSGT00940000153165.a.a.c.a.g	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
Mus_C	ANCESTRAL SPECIES	11	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.b.b.b.b.a.b.a.b.a	ENSGT00950000183013.e.a.c.a.b.b.h.b.a.a.b.b.d.b.a.a	ENSGT00940000153165.a.a.c.a.g	ENSGT00940000158089	ENSGT00390000013743	ENSGT00940000156086	ENSGT00490000043432	ENSGT00940000154095.b.a	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281
spretus	MODERN SPECIES	3	MGP_SPRETEiJ_G0019027	MGP_SPRETEiJ_G0000071	Zfp386 (MGP_SPRETEiJ_G0019028)	Vipr2 (MGP_SPRETEiJ_G0019029)	Dync2i1 (MGP_SPRETEiJ_G0019030)	Esyt2 (MGP_SPRETEiJ_G0019031)	Ncapg2 (MGP_SPRETEiJ_G0019032)	Ptprn2 (MGP_SPRETEiJ_G0019033)	Rapgef5 (MGP_SPRETEiJ_G0019034) #14	Cdca7l (MGP_SPRETEiJ_G0019035) #15	Dnah11 (MGP_SPRETEiJ_G0019036) #17	Sp4 (MGP_SPRETEiJ_G0019037) #18	Sp8 (MGP_SPRETEiJ_G0019038) #19	Abcb5 (MGP_SPRETEiJ_G0019039) #20	Itgb8 (MGP_SPRETEiJ_G0019040) #21	Macc1 (MGP_SPRETEiJ_G0019041) #22	Tmem196 (MGP_SPRETEiJ_G0019042)
Steppe mouse	MODERN SPECIES	3319	Stk31 (ENSMSIG00000018180)	Fam221a (ENSMSIG00000018134)	Ccdc126 (ENSMSIG00000018128)	Esyt2 (ENSMSIG00000017925)	ENSMSIG00000017915	Ncapg2 (ENSMSIG00000017853)	Ptprn2 (ENSMSIG00000017766)	ENSMSIG00000017759	Rapgef5 (ENSMSIG00000017670) #14	Cdca7l (ENSMSIG00000017635) #15	Dnah11 (ENSMSIG00000017415) #17	Sp4 (ENSMSIG00000017320) #18	Sp8 (ENSMSIG00000017284) #19	Abcb5 (ENSMSIG00000017217) #20	Itgb8 (ENSMSIG00000017155) #21	Macc1 (ENSMSIG00000017123) #22
Mouse	MODERN SPECIES	3	Ighv1-84 (ENSMUSG00000094940)	Ighv1-85 (ENSMUSG00000096150)	Zfp386 (ENSMUSG00000042063)	Vipr2 (ENSMUSG00000011171)	Dync2i1 (ENSMUSG00000042050)	Esyt2 (ENSMUSG00000021171)	Ncapg2 (ENSMUSG00000042029)	Ptprn2 (ENSMUSG00000056553)	Rapgef5 (ENSMUSG00000041992) #14	Cdca7l (ENSMUSG00000021175) #15	Dnah11 (ENSMUSG00000018581) #17	Sp4 (ENSMUSG00000025323) #18	Sp8 (ENSMUSG00000048562) #19	Abcb5 (ENSMUSG00000072791) #20	Itgb8 (ENSMUSG00000025321) #21	Macc1 (ENSMUSG00000041886) #22	Tmem196 (ENSMUSG00000048004)
Ryukyu mouse	MODERN SPECIES	3	Ighv1-47 (MGP_CAROLIEiJ_G0000064)	Ighv8-4 (MGP_CAROLIEiJ_G0000065)	Zfp386 (MGP_CAROLIEiJ_G0018176)	Vipr2 (MGP_CAROLIEiJ_G0018177)	Dync2i1 (MGP_CAROLIEiJ_G0018178)	Esyt2 (MGP_CAROLIEiJ_G0018179)	Ncapg2 (MGP_CAROLIEiJ_G0018180)	Ptprn2 (MGP_CAROLIEiJ_G0018181)	Rapgef5 (MGP_CAROLIEiJ_G0018182) #14	Cdca7l (MGP_CAROLIEiJ_G0018183) #15	Dnah11 (MGP_CAROLIEiJ_G0018184) #17	Sp4 (MGP_CAROLIEiJ_G0018185) #18	Sp8 (MGP_CAROLIEiJ_G0018186) #19	Abcb5 (MGP_CAROLIEiJ_G0018187) #20	Itgb8 (MGP_CAROLIEiJ_G0018188) #21	Macc1 (MGP_CAROLIEiJ_G0018189) #22	Tmem196 (MGP_CAROLIEiJ_G0018190)
Shrew mouse	MODERN SPECIES	20	Ighv1-47 (MGP_PahariEiJ_G0000052)	Ighv8-4 (MGP_PahariEiJ_G0000053)	Zfp386 (MGP_PahariEiJ_G0029936)	Vipr2 (MGP_PahariEiJ_G0029937)	Dync2i1 (MGP_PahariEiJ_G0029938)	Esyt2 (MGP_PahariEiJ_G0029939)	Ncapg2 (MGP_PahariEiJ_G0029940)	Ptprn2 (MGP_PahariEiJ_G0029941)	Rapgef5 (MGP_PahariEiJ_G0029942) #14	Cdca7l (MGP_PahariEiJ_G0029943) #15	Dnah11 (MGP_PahariEiJ_G0029944) #17	Sp4 (MGP_PahariEiJ_G0029945) #18	Sp8 (MGP_PahariEiJ_G0029946) #19	Abcb5 (MGP_PahariEiJ_G0029947) #20	Itgb8 (MGP_PahariEiJ_G0029948) #21	Macc1 (MGP_PahariEiJ_G0029949) #22	Tmem196 (MGP_PahariEiJ_G0029950)
Rat	MODERN SPECIES	16	ENSRNOG00000064569	Zfp386 (ENSRNOG00000004268)	Vipr2 (ENSRNOG00000004317)	Dync2i1 (ENSRNOG00000004520)	Esyt2 (ENSRNOG00000032391)	Ncapg2 (ENSRNOG00000004968)	Ptprn2 (ENSRNOG00000005003)	Rapgef5 (ENSRNOG00000005271) #14	Cdca7l (ENSRNOG00000005410) #15	Dnah11 (ENSRNOG00000005451) #17	Sp4 (ENSRNOG00000005472) #18	RGD1562420 (ENSRNOG00000005826)	Sp8 (ENSRNOG00000068174) #19	Abcb5 (ENSRNOG00000006398) #20	Itgb8 (ENSRNOG00000006569) #21	Macc1 (ENSRNOG00000037436) #22	Tmem196 (ENSRNOG00000037435)	ENSRNOG00000071153
Upper Galilee mountains blind mole rat	MODERN SPECIES	413															Itgb8 (ENSNGAG00000008122) #21	Macc1 (ENSNGAG00000022757) #22	Tmem196 (ENSNGAG00000021516)	Polr1f (ENSNGAG00000022455) #25	Ferd3l (ENSNGAG00000012141) #26	Hdac9 (ENSNGAG00000023208) #28	Snx13 (ENSNGAG00000017668) #30	ENSNGAG00000009505 #32
Lesser Egyptian jerboa	MODERN SPECIES	49	ENSJJAG00000024157	Gpnmb (ENSJJAG00000016316)	Nupl2 (ENSJJAG00000016370)	Klhl7 (ENSJJAG00000020404)	Hycc1 (ENSJJAG00000010769) #8	Tomm7 (ENSJJAG00000015481) #10	ENSJJAG00000012041 #11	Rapgef5 (ENSJJAG00000011120) #14	Cdca7l (ENSJJAG00000019084) #15	Dnah11 (ENSJJAG00000016436) #17	Sp4 (ENSJJAG00000005918) #18	ENSJJAG00000007215 #19	Abcb5 (ENSJJAG00000012546) #20	Itgb8 (ENSJJAG00000010258) #21	ENSJJAG00000022523	Macc1 (ENSJJAG00000011164) #22	ENSJJAG00000018343	Tmem196 (ENSJJAG00000016048)	Polr1f (ENSJJAG00000015887) #25	ENSJJAG00000002041	ENSJJAG00000007778	ENSJJAG00000022475 ##29	Snx13 (ENSJJAG00000023704) #30	ENSJJAG00000008319 ##32	Agr3 (ENSJJAG00000017440) ##34	Agr2 (ENSJJAG00000008799) #34	Tspan13 (ENSJJAG00000009446) #33	Bzw2 (ENSJJAG00000016668) #35	Ankmy2 (ENSJJAG00000021161) #36	ENSJJAG00000023577 #37	Sostdc1 (ENSJJAG00000010091)
Kangaroo rat	MODERN SPECIES	391								ENSDORG00000023585 #14	Rapgef5 (ENSDORG00000007969) #14	Cdca7l (ENSDORG00000005901) #15	Dnah11 (ENSDORG00000005890) #17	Sp4 (ENSDORG00000029615) #18	Sp8 (ENSDORG00000024994) #19	Abcb5 (ENSDORG00000000201) #20	Itgb8 (ENSDORG00000000272) #21	Macc1 (ENSDORG00000010765) #22	ENSDORG00000029943	ENSDORG00000027869	Tmem196 (ENSDORG00000007796)	Polr1f (ENSDORG00000007795) #25	Ferd3l (ENSDORG00000012867) #26	ENSDORG00000023238	Snx13 (ENSDORG00000005766) #30	Ahr (ENSDORG00000007750) #32	ENSDORG00000029209	Agr3 (ENSDORG00000007740) ##34	Agr2 (ENSDORG00000007734) #34	Tspan13 (ENSDORG00000030021) #33	Bzw2 (ENSDORG00000010878) #35	Ankmy2 (ENSDORG00000010876) #36	ENSDORG00000010873 #37
Lagomorpha	ANCESTRAL SPECIES	39	ENSGT00910000147494	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878.e #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30
Rabbit	MODERN SPECIES	1	NUP42 (ENSOCUG00000014808)	KLHL7 (ENSOCUG00000014780)	HYCC1 (ENSOCUG00000006565) #8	ENSOCUG00000036787	ENSOCUG00000029441	ENSOCUG00000037710 #10	ENSOCUG00000027471 #11	RAPGEF5 (ENSOCUG00000015115) #14	ENSOCUG00000030459	ENSOCUG00000023674	CDCA7L (ENSOCUG00000014023) #15	SP4 (ENSOCUG00000015345) #18	ENSOCUG00000036529	ABCB5 (ENSOCUG00000010857) #20	ITGB8 (ENSOCUG00000002197) #21	MACC1 (ENSOCUG00000003618) #22	TMEM196 (ENSOCUG00000015153) #24	ENSOCUG00000015156 #25	HDAC9 (ENSOCUG00000014444) #28	SNX13 (ENSOCUG00000001142) #30
Pika	MODERN SPECIES	3969																MACC1 (ENSOPRG00000017076) #22
Tree shrew	MODERN SPECIES	4464																MACC1 (ENSTBEG00000003089) #22
Primates	ANCESTRAL SPECIES	12	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Haplorrhini	ANCESTRAL SPECIES	8	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Simiiformes	ANCESTRAL SPECIES	12	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Catarrhini	ANCESTRAL SPECIES	6	ENSGT00950000183188.B	ENSGT00940000163505.a.b	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Hominoidea	ANCESTRAL SPECIES	6	ENSGT00940000163505.a.b	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00910000148420	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000157795.b	ENSGT00940000153289.a.b
Hominidae	ANCESTRAL SPECIES	11	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00910000148420	ENSGT00940000157827 #18	ENSGT00390000004524.c.a.a.b.b	ENSGT00390000012691.c.a.b	ENSGT00390000004690.a.b.h	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000157795.b	ENSGT00940000153289.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	25	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00390000008042.A.a.b.d	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00910000148420	ENSGT00940000157827 #18	ENSGT00390000004524.c.a.a.b.b	ENSGT00390000012691.c.a.b	ENSGT00390000004690.a.b.h	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155142.i.a.b	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00440000039046.b	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820.b #36	ENSGT00940000157795.b
Homo/Pan group	ANCESTRAL SPECIES	24	ENSGT00390000002517.b	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00390000008042.A.a.b.d	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00910000148420	ENSGT00940000157827 #18	ENSGT00390000012691.c.a.b	ENSGT00390000004690.a.b.h	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155142.i.a.b	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00440000039046.b	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820.b #36	ENSGT00940000157795.b
Pan	ANCESTRAL SPECIES	25	ENSGT00390000002517.b	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00390000008042.A.a.b.d	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00910000148420	ENSGT00940000157827 #18	ENSGT00390000012691.c.a.b	ENSGT00390000004690.a.b.h	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155142.i.a.b	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00440000039046.b	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820.a #36	ENSGT00390000016820.b #36	ENSGT00940000157795.b
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	20	TOMM7 (ENSPTRG00000018980) #10	ENSPTRG00000052763	ENSPTRG00000047418	IL6 (ENSPTRG00000018979) #11	ENSPTRG00000051768	ENSPTRG00000052284	RAPGEF5 (ENSPTRG00000018976) #14	ENSPTRG00000050953	CDCA7L (ENSPTRG00000018975) #15	DNAH11 (ENSPTRG00000049017) #17	SP4 (ENSPTRG00000018970) #18	ENSPTRG00000051657	SP8 (ENSPTRG00000018968) #19	ABCB5 (ENSPTRG00000018966) #20	ITGB8 (ENSPTRG00000018965) #21	MACC1 (ENSPTRG00000018964) #22	TMEM196 (ENSPTRG00000018963) #24	POLR1F (ENSPTRG00000018962) #25	FERD3L (ENSPTRG00000018961) #26	TWIST1 (ENSPTRG00000018960) #27	HDAC9 (ENSPTRG00000018959) #28	SNX13 (ENSPTRG00000018957) #30	AHR (ENSPTRG00000018955) #32	ENSPTRG00000050595	AGR3 (ENSPTRG00000018954) ##34	AGR2 (ENSPTRG00000018953) #34	TSPAN13 (ENSPTRG00000018952) #33	BZW2 (ENSPTRG00000018951) #35	ANKMY2 (ENSPTRG00000018950) #36	ENSPTRG00000000567	LRRC72 (ENSPTRG00000028653)
Chimpanzee	MODERN SPECIES	583															ENSPTRG00000052863 #21	ENSPTRG00000051620 #22
Bonobo	MODERN SPECIES	20	ENSPPAG00000022918	ENSPPAG00000035732 #11	ENSPPAG00000034348	ENSPPAG00000041225 #14	ENSPPAG00000041457	CDCA7L (ENSPPAG00000037358) #15	DNAH11 (ENSPPAG00000043198) #17	ENSPPAG00000029065	SP4 (ENSPPAG00000035736) #18	ENSPPAG00000030781	ENSPPAG00000029131	ENSPPAG00000036145 #19	ABCB5 (ENSPPAG00000039922) #20	ENSPPAG00000028502	ITGB8 (ENSPPAG00000043938) #21	MACC1 (ENSPPAG00000030497) #22	TMEM196 (ENSPPAG00000028334) #24	POLR1F (ENSPPAG00000034623) #25	FERD3L (ENSPPAG00000010360) #26	ENSPPAG00000041192 #27	HDAC9 (ENSPPAG00000043202) #28	SNX13 (ENSPPAG00000028500) #30	AHR (ENSPPAG00000030245) #32	ENSPPAG00000038575	AGR3 (ENSPPAG00000031582) ##34	AGR2 (ENSPPAG00000037458) #34	TSPAN13 (ENSPPAG00000013639) #33	BZW2 (ENSPPAG00000029762) #35	ANKMY2 (ENSPPAG00000043278) #36	ENSPPAG00000036236	LRRC72 (ENSPPAG00000033885)
Human	MODERN SPECIES	19	MALSU1 (ENSG00000156928)	GPNMB (ENSG00000136235)	NUP42 (ENSG00000136243)	KLHL7 (ENSG00000122550)	HYCC1 (ENSG00000122591) #8	TOMM7 (ENSG00000196683) #10	IL6 (ENSG00000136244) #11	STEAP1B (ENSG00000105889)	RAPGEF5 (ENSG00000136237) #14	CDCA7L (ENSG00000164649) #15	DNAH11 (ENSG00000105877) #17	SP4 (ENSG00000105866) #18	SP8 (ENSG00000164651) #19	ABCB5 (ENSG00000004846) #20	ITGB8 (ENSG00000105855) #21	MACC1 (ENSG00000183742) #22	TMEM196 (ENSG00000173452) #24	POLR1F (ENSG00000105849) #25	FERD3L (ENSG00000146618) #26	TWIST1 (ENSG00000122691) #27	HDAC9 (ENSG00000048052) #28	PRPS1L1 (ENSG00000229937) #29	SNX13 (ENSG00000071189) #30	ENSG00000283321	AHR (ENSG00000106546) #32	AGR3 (ENSG00000173467) ##34	AGR2 (ENSG00000106541) #34	TSPAN13 (ENSG00000106537) #33	BZW2 (ENSG00000136261) #35	ANKMY2 (ENSG00000106524) #36	LRRC72 (ENSG00000205858)
Gorilla	MODERN SPECIES	20	ENSGGOG00000025021 #10	ENSGGOG00000028092	ENSGGOG00000036649	IL6 (ENSGGOG00000005335) #11	ENSGGOG00000001859	RAPGEF5 (ENSGGOG00000017128) #14	CDCA7L (ENSGGOG00000004782) #15	DNAH11 (ENSGGOG00000004748) #17	SP4 (ENSGGOG00000001332) #18	ENSGGOG00000025012	ENSGGOG00000025589	ENSGGOG00000001311	ABCB5 (ENSGGOG00000008618) #20	ENSGGOG00000039456	ITGB8 (ENSGGOG00000002471) #21	MACC1 (ENSGGOG00000005884) #22	TMEM196 (ENSGGOG00000005711) #24	TWISTNB (ENSGGOG00000026888) #25	FERD3L (ENSGGOG00000021943) #26	HDAC9 (ENSGGOG00000013656) #28	PRPS1L1 (ENSGGOG00000025809) #29	SNX13 (ENSGGOG00000010291) #30	AHR (ENSGGOG00000011367) #32	ENSGGOG00000038771	AGR3 (ENSGGOG00000003470) ##34	AGR2 (ENSGGOG00000012859) #34	TSPAN13 (ENSGGOG00000011165) #33	BZW2 (ENSGGOG00000022223) #35	ANKMY2 (ENSGGOG00000007522) #36	ENSGGOG00000036669	LRRC72 (ENSGGOG00000005060)
Orangutan	MODERN SPECIES	20	NUP42 (ENSPPYG00000031100)	ENSPPYG00000029950	KLHL7 (ENSPPYG00000017736)	HYCC1 (ENSPPYG00000017738) #8	ENSPPYG00000017739 #10	IL6 (ENSPPYG00000017740) #11	ENSPPYG00000017741	RAPGEF5 (ENSPPYG00000017742) #14	CDCA7L (ENSPPYG00000017744) #15	DNAH11 (ENSPPYG00000017745) #17	SP4 (ENSPPYG00000017746) #18	ENSPPYG00000039103	SP8 (ENSPPYG00000039855) #19	ABCB5 (ENSPPYG00000017748) #20	ITGB8 (ENSPPYG00000017749) #21	MACC1 (ENSPPYG00000017750) #22	TMEM196 (ENSPPYG00000017751) #24	POLR1F (ENSPPYG00000032278) #25	FERD3L (ENSPPYG00000017753) #26	TWIST1 (ENSPPYG00000017754) #27	HDAC9 (ENSPPYG00000017755) #28	SNX13 (ENSPPYG00000017757) #30	AHR (ENSPPYG00000017758) #32	AGR3 (ENSPPYG00000017760) ##34	AGR2 (ENSPPYG00000017761) #34	TSPAN13 (ENSPPYG00000017762) #33	BZW2 (ENSPPYG00000017763) #35	ANKMY2 (ENSPPYG00000017764) #36	LRRC72 (ENSPPYG00000035210)	SOSTDC1 (ENSPPYG00000017767)	CRPPA (ENSPPYG00000017768)
Gibbon	MODERN SPECIES	1	ENSNLEG00000016798	HYCC1 (ENSNLEG00000016785) #8	ENSNLEG00000032170 #10	ENSNLEG00000016777 #11	RAPGEF5 (ENSNLEG00000016769) #14	CDCA7L (ENSNLEG00000016758) #15	DNAH11 (ENSNLEG00000016739) #17	ENSNLEG00000029437	SP4 (ENSNLEG00000016733) #18	ENSNLEG00000026698	ENSNLEG00000032580	ENSNLEG00000032986	SP8 (ENSNLEG00000016729) #19	ABCB5 (ENSNLEG00000016694) #20	ITGB8 (ENSNLEG00000016686) #21	MACC1 (ENSNLEG00000016683) #22	TMEM196 (ENSNLEG00000016677) #24	POLR1F (ENSNLEG00000035755) #25	FERD3L (ENSNLEG00000019265) #26	ENSNLEG00000019263	HDAC9 (ENSNLEG00000016612) #28	SNX13 (ENSNLEG00000016555) #30	AHR (ENSNLEG00000016550) #32	AGR3 (ENSNLEG00000016546) ##34	AGR2 (ENSNLEG00000016530) #34	TSPAN13 (ENSNLEG00000016510) #33	BZW2 (ENSNLEG00000016417) #35	ANKMY2 (ENSNLEG00000016394) #36	ENSNLEG00000033414	LRRC72 (ENSNLEG00000016389)	SOSTDC1 (ENSNLEG00000016384)
Cercopithecidae	ANCESTRAL SPECIES	11	ENSGT00950000183188.B	ENSGT00940000163505.a.b	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Cercopithecinae	ANCESTRAL SPECIES	8	ENSGT00940000163505.a.b	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	8	ENSGT00940000163505.a.b.a.a	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Macaca	ANCESTRAL SPECIES	3	ENSGT00950000183188.B	ENSGT00940000163505.a.b.a.a	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00390000006548.b.j.a.d	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Macaca_a	ANCESTRAL SPECIES	7	ENSGT00950000183188.B	ENSGT00940000163505.a.b.a.a	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00390000006548.b.j.a.d	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Rhesus	MODERN SPECIES	13	MALSU1 (ENSMMUG00000061041)	GPNMB (ENSMMUG00000012648)	ENSMMUG00000064876	NUP42 (ENSMMUG00000001560)	KLHL7 (ENSMMUG00000001562)	HYCC1 (ENSMMUG00000000517) #8	TOMM7 (ENSMMUG00000065311) #10	IL6 (ENSMMUG00000019983) #11	ENSMMUG00000056674	RAPGEF5 (ENSMMUG00000002987) #14	CDCA7L (ENSMMUG00000022766) #15	SP4 (ENSMMUG00000021684) #18	SP8 (ENSMMUG00000003722) #19	ABCB5 (ENSMMUG00000007821) #20	ITGB8 (ENSMMUG00000006898) #21	MACC1 (ENSMMUG00000022683) #22	TMEM196 (ENSMMUG00000009610) #24	POLR1F (ENSMMUG00000009609) #25	HDAC9 (ENSMMUG00000011170) #28	ENSMMUG00000053098	PRPS1L1 (ENSMMUG00000009748) #29	SNX13 (ENSMMUG00000021915) #30	ENSMMUG00000062260	AHR (ENSMMUG00000012203) #32	ENSMMUG00000031775	ENSMMUG00000051849	AGR3 (ENSMMUG00000016017) ##34	AGR2 (ENSMMUG00000017050) #34	TSPAN13 (ENSMMUG00000017049) #33	BZW2 (ENSMMUG00000017045) #35	ANKMY2 (ENSMMUG00000017041) #36
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000035836 #10	IL6 (ENSMFAG00000000229) #11	ENSMFAG00000054566	ENSMFAG00000051658	RAPGEF5 (ENSMFAG00000002425) #14	CDCA7L (ENSMFAG00000001391) #15	DNAH11 (ENSMFAG00000044423) #17	SP4 (ENSMFAG00000002740) #18	SP8 (ENSMFAG00000055927) #19	ABCB5 (ENSMFAG00000020450) #20	ENSMFAG00000054030	ENSMFAG00000062991	ENSMFAG00000065699	ENSMFAG00000034604	ITGB8 (ENSMFAG00000000217) #21	MACC1 (ENSMFAG00000031393) #22	TMEM196 (ENSMFAG00000049094) #24	POLR1F (ENSMFAG00000045328) #25	ENSMFAG00000029127	FERD3L (ENSMFAG00000019773) #26	TWIST1 (ENSMFAG00000045982) #27	ENSMFAG00000051581	HDAC9 (ENSMFAG00000008589) #28	PRPS1L1 (ENSMFAG00000039072) #29	SNX13 (ENSMFAG00000039975) #30	ENSMFAG00000053612	AHR (ENSMFAG00000035664) #32	AGR3 (ENSMFAG00000035722) ##34	AGR2 (ENSMFAG00000035645) #34	ENSMFAG00000003639 #33	BZW2 (ENSMFAG00000002705) #35
Pig-tailed macaque	MODERN SPECIES	534	MALSU1 (ENSMNEG00000035724)	GPNMB (ENSMNEG00000036790)	NUP42 (ENSMNEG00000006026)	KLHL7 (ENSMNEG00000036449)	HYCC1 (ENSMNEG00000024817) #8	ENSMNEG00000036770 #10	IL6 (ENSMNEG00000003406) #11	RAPGEF5 (ENSMNEG00000032992) #14	CDCA7L (ENSMNEG00000038917) #15	DNAH11 (ENSMNEG00000037208) #17	SP4 (ENSMNEG00000038124) #18	ENSMNEG00000030054	SP8 (ENSMNEG00000028781) #19	ABCB5 (ENSMNEG00000043301) #20	ITGB8 (ENSMNEG00000037384) #21	MACC1 (ENSMNEG00000040192) #22	TMEM196 (ENSMNEG00000028154) #24	POLR1F (ENSMNEG00000041159) #25	ENSMNEG00000029122	FERD3L (ENSMNEG00000000812) #26	ENSMNEG00000003361	HDAC9 (ENSMNEG00000043567) #28	SNX13 (ENSMNEG00000040568) #30	AHR (ENSMNEG00000037051) #32	AGR3 (ENSMNEG00000030796) ##34	AGR2 (ENSMNEG00000040536) #34	TSPAN13 (ENSMNEG00000035525) #33	BZW2 (ENSMNEG00000002080) #35	ANKMY2 (ENSMNEG00000029729) #36	LRRC72 (ENSMNEG00000040980)	SOSTDC1 (ENSMNEG00000042644)
Cercopithecinae_b	ANCESTRAL SPECIES	11	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000007456	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Cercopithecinae_d	ANCESTRAL SPECIES	10	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000017606.a.a.i.a.b.a.a.c.b	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Drill	MODERN SPECIES	420	MALSU1 (ENSMLEG00000041736)	GPNMB (ENSMLEG00000042619)	NUP42 (ENSMLEG00000036917)	KLHL7 (ENSMLEG00000034863)	HYCC1 (ENSMLEG00000029209) #8	ENSMLEG00000026554 #10	IL6 (ENSMLEG00000034011) #11	RAPGEF5 (ENSMLEG00000042037) #14	CDCA7L (ENSMLEG00000044429) #15	DNAH11 (ENSMLEG00000021317) #17	SP4 (ENSMLEG00000042211) #18	ENSMLEG00000035908	ENSMLEG00000041341	ABCB5 (ENSMLEG00000034697) #20	ITGB8 (ENSMLEG00000037210) #21	MACC1 (ENSMLEG00000044226) #22	ENSMLEG00000033513	TMEM196 (ENSMLEG00000044198) #24	POLR1F (ENSMLEG00000042783) #25	ENSMLEG00000034959	FERD3L (ENSMLEG00000018020) #26	TWIST1 (ENSMLEG00000036035) #27	ENSMLEG00000008070	HDAC9 (ENSMLEG00000035193) #28	SNX13 (ENSMLEG00000041046) #30	AHR (ENSMLEG00000029744) #32
Sooty mangabey	MODERN SPECIES	147								CDCA7L (ENSCATG00000032002) #15	DNAH11 (ENSCATG00000022060) #17	SP4 (ENSCATG00000017624) #18	ENSCATG00000008206	SP8 (ENSCATG00000036724) #19	ABCB5 (ENSCATG00000044646) #20	ITGB8 (ENSCATG00000040735) #21	ENSCATG00000015015	MACC1 (ENSCATG00000030512) #22	ENSCATG00000035531	TMEM196 (ENSCATG00000038942) #24	POLR1F (ENSCATG00000035621) #25	FERD3L (ENSCATG00000018900) #26	ENSCATG00000018918	HDAC9 (ENSCATG00000037558) #28	SNX13 (ENSCATG00000042039) #30	AHR (ENSCATG00000044976) #32	AGR3 (ENSCATG00000035431) ##34	AGR2 (ENSCATG00000037807) #34	TSPAN13 (ENSCATG00000035412) #33	BZW2 (ENSCATG00000040929) #35	ANKMY2 (ENSCATG00000034081) #36	LRRC72 (ENSCATG00000013629)	SOSTDC1 (ENSCATG00000038465)
Olive baboon	MODERN SPECIES	14	NUP42 (ENSPANG00000005682)	KLHL7 (ENSPANG00000025374)	HYCC1 (ENSPANG00000022515) #8	ENSPANG00000008241 #10	IL6 (ENSPANG00000000700) #11	ENSPANG00000046282	RAPGEF5 (ENSPANG00000000701) #14	CDCA7L (ENSPANG00000012840) #15	DNAH11 (ENSPANG00000021596) #17	SP4 (ENSPANG00000006251) #18	SP8 (ENSPANG00000023061) #19	ENSPANG00000046908	ABCB5 (ENSPANG00000011492) #20	ENSPANG00000050246	ITGB8 (ENSPANG00000006887) #21	MACC1 (ENSPANG00000006404) #22	TMEM196 (ENSPANG00000045812) #24	POLR1F (ENSPANG00000015736) #25	ENSPANG00000029384	FERD3L (ENSPANG00000010936) #26	TWIST1 (ENSPANG00000041053) #27	ENSPANG00000038169 #28	ENSPANG00000022056 #28	ENSPANG00000045769	PRPS1L1 (ENSPANG00000015919) #29	SNX13 (ENSPANG00000004971) #30	AHR (ENSPANG00000002444) #32	AGR3 (ENSPANG00000013000) ##34	ENSPANG00000025373 #35	ANKMY2 (ENSPANG00000024070) #36	LRRC72 (ENSPANG00000015803)
Vervet Monkey	MODERN SPECIES	13	MALSU1 (ENSCSAG00000013969)	GPNMB (ENSCSAG00000013965)	NUP42 (ENSCSAG00000013956)	KLHL7 (ENSCSAG00000013950)	HYCC1 (ENSCSAG00000013945) #8	TOMM7 (ENSCSAG00000013939) #10	IL6 (ENSCSAG00000013925) #11	RAPGEF5 (ENSCSAG00000013898) #14	CDCA7L (ENSCSAG00000013887) #15	DNAH11 (ENSCSAG00000013803) #17	SP4 (ENSCSAG00000013609) #18	SP8 (ENSCSAG00000013600) #19	ABCB5 (ENSCSAG00000013593) #20	ITGB8 (ENSCSAG00000013574) #21	ENSCSAG00000019608	MACC1 (ENSCSAG00000013560) #22	ENSCSAG00000013550	ENSCSAG00000013547	POLR1F (ENSCSAG00000013544) #25	FERD3L (ENSCSAG00000019609) #26	TWIST1 (ENSCSAG00000019610) #27	ENSCSAG00000013542 #28	ENSCSAG00000013539 #28	ENSCSAG00000013537 #28	PRPS1L1 (ENSCSAG00000019611) #29	SNX13 (ENSCSAG00000013523) #30	AHR (ENSCSAG00000013508) #32	AGR3 (ENSCSAG00000013496) ##34	AGR2 (ENSCSAG00000013491) #34	TSPAN13 (ENSCSAG00000013482) #33	BZW2 (ENSCSAG00000013474) #35
Rhinopithecus	ANCESTRAL SPECIES	263				ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00390000002062.h	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00390000004524.c.a.a.b.b	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000162047.h	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30
Golden snub-nosed monkey	MODERN SPECIES	3303															ITGB8 (ENSRROG00000002836) #21	MACC1 (ENSRROG00000006887) #22	ENSRROG00000037451	TMEM196 (ENSRROG00000043909) #24	POLR1F (ENSRROG00000040155) #25	ENSRROG00000018167	FERD3L (ENSRROG00000012883) #26	TWIST1 (ENSRROG00000038605) #27	ENSRROG00000017726	HDAC9 (ENSRROG00000031560) #28	ENSRROG00000030725	ENSRROG00000031273 #30
Black snub-nosed monkey	MODERN SPECIES	378		HYCC1 (ENSRBIG00000041875) #8	ENSRBIG00000043074 #10	IL6 (ENSRBIG00000044039) #11	ENSRBIG00000022043	ENSRBIG00000029815	RAPGEF5 (ENSRBIG00000020324) #14	CDCA7L (ENSRBIG00000000806) #15	DNAH11 (ENSRBIG00000034224) #17	SP4 (ENSRBIG00000039879) #18	ENSRBIG00000003508	ENSRBIG00000034971	SP8 (ENSRBIG00000028482) #19	ABCB5 (ENSRBIG00000042594) #20	ITGB8 (ENSRBIG00000040861) #21	MACC1 (ENSRBIG00000033021) #22	ENSRBIG00000024429
Platyrrhini	ANCESTRAL SPECIES	10	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118.n	ENSGT00940000155602.a	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Cebidae	ANCESTRAL SPECIES	9	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118.n	ENSGT00940000155602.a	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a.fb.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Cebidae_a	ANCESTRAL SPECIES	7	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118.n	ENSGT00940000155602.a	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a.fb.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Bolivian squirrel monkey	MODERN SPECIES	109	CCNJL (ENSSBOG00000022971)	C1QTNF2 (ENSSBOG00000032053)	FAM200C (ENSSBOG00000018847)	SLU7 (ENSSBOG00000003225)	ENSSBOG00000012956	ATP10B (ENSSBOG00000031861)	ENSSBOG00000021032	GABRB2 (ENSSBOG00000006216)	GABRA6 (ENSSBOG00000028112)	GABRA1 (ENSSBOG00000029701)	GABRG2 (ENSSBOG00000027465)	NUDCD2 (ENSSBOG00000028393)	ENSSBOG00000027545	MAT2B (ENSSBOG00000035087)	ITGB8 (ENSSBOG00000028143) #21	MACC1 (ENSSBOG00000026938) #22	TMEM196 (ENSSBOG00000023617) #24	POLR1F (ENSSBOG00000023188) #25
Capuchin	MODERN SPECIES	45	KLHL7 (ENSCCAG00000031111)	ENSCCAG00000032424	FAM126A (ENSCCAG00000027272) #8	TOMM7 (ENSCCAG00000033041) #10	IL6 (ENSCCAG00000023712) #11	RAPGEF5 (ENSCCAG00000019957) #14	CDCA7L (ENSCCAG00000021172) #15	ENSCCAG00000037585	DNAH11 (ENSCCAG00000035150) #17	ENSCCAG00000035249	SP4 (ENSCCAG00000030472) #18	ENSCCAG00000033872	SP8 (ENSCCAG00000030995) #19	ABCB5 (ENSCCAG00000031192) #20	ITGB8 (ENSCCAG00000037918) #21	MACC1 (ENSCCAG00000013469) #22	TMEM196 (ENSCCAG00000030192) #24	POLR1F (ENSCCAG00000026416) #25	ENSCCAG00000020115	ENSCCAG00000019905	HDAC9 (ENSCCAG00000020834) #28	ENSCCAG00000027532	SNX13 (ENSCCAG00000030831) #30	ENSCCAG00000013414	AHR (ENSCCAG00000027846) #32	AGR3 (ENSCCAG00000035875) ##34	AGR2 (ENSCCAG00000037867) #34	TSPAN13 (ENSCCAG00000020472) #33	BZW2 (ENSCCAG00000028749) #35	ANKMY2 (ENSCCAG00000038043) #36	LRRC72 (ENSCCAG00000031114)
Marmoset	MODERN SPECIES	20	ENSCJAG00000086172	NUP42 (ENSCJAG00000001466)	KLHL7 (ENSCJAG00000001422)	ENSCJAG00000072766	HYCC1 (ENSCJAG00000001415) #8	ENSCJAG00000077464	ENSCJAG00000047185 #10	IL6 (ENSCJAG00000001400) #11	RAPGEF5 (ENSCJAG00000036784) #14	CDCA7L (ENSCJAG00000001351) #15	DNAH11 (ENSCJAG00000001301) #17	SP4 (ENSCJAG00000001282) #18	SP8 (ENSCJAG00000001245) #19	ABCB5 (ENSCJAG00000001194) #20	ITGB8 (ENSCJAG00000001171) #21	MACC1 (ENSCJAG00000001164) #22	TMEM196 (ENSCJAG00000001161) #24	POLR1F (ENSCJAG00000001148) #25	FERD3L (ENSCJAG00000038997) #26	TWIST1 (ENSCJAG00000048476) #27	HDAC9 (ENSCJAG00000001076) #28	ENSCJAG00000055908	ENSCJAG00000084748	ENSCJAG00000078064	PRPS1L1 (ENSCJAG00000084763) #29	SNX13 (ENSCJAG00000001040) #30	ENSCJAG00000072238	ENSCJAG00000080286	AHR (ENSCJAG00000001029) #32	AGR3 (ENSCJAG00000001020) ##34	AGR2 (ENSCJAG00000000997) #34
Mas night monkey	MODERN SPECIES	1246															ENSANAG00000020388	MACC1 (ENSANAG00000025893) #22	TMEM196 (ENSANAG00000020365) #24	POLR1F (ENSANAG00000026418) #25
Tarsier	MODERN SPECIES	6203													ENSTSYG00000035852 #20	ENSTSYG00000030857	ITGB8 (ENSTSYG00000005437) #21	MACC1 (ENSTSYG00000009061) #22
Strepsirrhini	ANCESTRAL SPECIES	9	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Lemuriformes	ANCESTRAL SPECIES	4	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Lemuriformes_a	ANCESTRAL SPECIES	109	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833.k #10	ENSGT00390000014833.l #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Coquerels sifaka	MODERN SPECIES	770	MALSU1 (ENSPCOG00000023462)	GPNMB (ENSPCOG00000018874)	ENSPCOG00000026578	KLHL7 (ENSPCOG00000019482)	HYCC1 (ENSPCOG00000027753) #8	TOMM7 (ENSPCOG00000025812) #10	ENSPCOG00000015406 #11	RAPGEF5 (ENSPCOG00000024208) #14	CDCA7L (ENSPCOG00000006365) #15	ENSPCOG00000006256	DNAH11 (ENSPCOG00000015545) #17	SP4 (ENSPCOG00000014034) #18	SP8 (ENSPCOG00000010150) #19	ABCB5 (ENSPCOG00000019076) #20	ITGB8 (ENSPCOG00000020325) #21	MACC1 (ENSPCOG00000015984) #22	ENSPCOG00000013796	ENSPCOG00000004583	TMEM196 (ENSPCOG00000018528) #24	POLR1F (ENSPCOG00000017601) #25	HDAC9 (ENSPCOG00000022707) #28	ENSPCOG00000007173	SNX13 (ENSPCOG00000025896) #30	AHR (ENSPCOG00000027017) #32	AGR2 (ENSPCOG00000020586) #34	TSPAN13 (ENSPCOG00000000668) #33	BZW2 (ENSPCOG00000014275) #35	ANKMY2 (ENSPCOG00000017740) #36	LRRC72 (ENSPCOG00000025114)	SOSTDC1 (ENSPCOG00000015087)	ENSPCOG00000000682
Greater bamboo lemur	MODERN SPECIES	513																MACC1 (ENSPSMG00000016327) #22	TMEM196 (ENSPSMG00000016348) #24	ENSPSMG00000016354	POLR1F (ENSPSMG00000016361) #25	FERD3L (ENSPSMG00000016366) #26	ENSPSMG00000016380	HDAC9 (ENSPSMG00000016568) #28	SNX13 (ENSPSMG00000016751) #30	ENSPSMG00000016770	AHR (ENSPSMG00000016802) #32	AGR3 (ENSPSMG00000016834) ##34	AGR2 (ENSPSMG00000016851) #34	TSPAN13 (ENSPSMG00000016888) #33	BZW2 (ENSPSMG00000016967) #35	ANKMY2 (ENSPSMG00000017011) #36	LRRC72 (ENSPSMG00000017047)
Mouse lemur	MODERN SPECIES	2	IGF2BP3 (ENSMICG00000013683)	MALSU1 (ENSMICG00000033474)	GPNMB (ENSMICG00000013667)	NUP42 (ENSMICG00000046211)	KLHL7 (ENSMICG00000013635)	HYCC1 (ENSMICG00000006711) #8	TOMM7 (ENSMICG00000006709) #10	ENSMICG00000006701 #11	RAPGEF5 (ENSMICG00000006685) #14	CDCA7L (ENSMICG00000008539) #15	DNAH11 (ENSMICG00000008480) #17	SP4 (ENSMICG00000034088) #18	SP8 (ENSMICG00000037978) #19	ABCB5 (ENSMICG00000013242) #20	ITGB8 (ENSMICG00000009239) #21	MACC1 (ENSMICG00000027329) #22	TMEM196 (ENSMICG00000028950) #24	POLR1F (ENSMICG00000036489) #25	ENSMICG00000033981	HDAC9 (ENSMICG00000000850) #28	SNX13 (ENSMICG00000014067) #30	ENSMICG00000045138	AHR (ENSMICG00000011723) #32	AGR3 (ENSMICG00000013575) ##34	AGR2 (ENSMICG00000015349) #34	TSPAN13 (ENSMICG00000015312) #33	BZW2 (ENSMICG00000015293) #35	ANKMY2 (ENSMICG00000009932) #36	ENSMICG00000036491 #37	SOSTDC1 (ENSMICG00000015715)	CRPPA (ENSMICG00000047544)
Bushbaby	MODERN SPECIES	143	MALSU1 (ENSOGAG00000017157)	GPNMB (ENSOGAG00000017155)	NUP42 (ENSOGAG00000017153)	KLHL7 (ENSOGAG00000017098)	HYCC1 (ENSOGAG00000002456) #8	ENSOGAG00000029286 #9	ENSOGAG00000004177 #11	RAPGEF5 (ENSOGAG00000013911) #14	CDCA7L (ENSOGAG00000009860) #15	DNAH11 (ENSOGAG00000009835) #17	SP4 (ENSOGAG00000007284) #18	ENSOGAG00000026884	ENSOGAG00000025614	ABCB5 (ENSOGAG00000009068) #20	ITGB8 (ENSOGAG00000003839) #21	MACC1 (ENSOGAG00000006910) #22	TMEM196 (ENSOGAG00000009193) #24	POLR1F (ENSOGAG00000009189) #25	FERD3L (ENSOGAG00000014773) #26	HDAC9 (ENSOGAG00000007864) #28	SNX13 (ENSOGAG00000001781) #30	AHR (ENSOGAG00000012656) #32
Laurasiatheria	ANCESTRAL SPECIES	22	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000013151.a.b #22
Hedgehog	MODERN SPECIES	7552																MACC1 (ENSEEUG00000004232) #22
Common shrew	MODERN SPECIES	5922																ENSSARG00000008285 #22
Laurasiatheria_a	ANCESTRAL SPECIES	14	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Artiodactyla	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Suina	ANCESTRAL SPECIES	15	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Pig	MODERN SPECIES	17	TOMM7 (ENSSSCG00000015384) #10	IL6 (ENSSSCG00000020970) #11	ENSSSCG00000015383 #14	ENSSSCG00000054384 #14	ENSSSCG00000035257	CDCA7L (ENSSSCG00000015380) #15	ENSSSCG00000042226	ENSSSCG00000042690	DNAH11 (ENSSSCG00000015379) #17	SP4 (ENSSSCG00000015378) #18	ENSSSCG00000052264	SP8 (ENSSSCG00000031078) #19	ENSSSCG00000053532	ABCB5 (ENSSSCG00000015377) #20	ITGB8 (ENSSSCG00000015375) #21	MACC1 (ENSSSCG00000024802) #22	TMEM196 (ENSSSCG00000015373) #24	POLR1F (ENSSSCG00000025298) #25	FERD3L (ENSSSCG00000015371) #26	TWIST1 (ENSSSCG00000058909) #27	HDAC9 (ENSSSCG00000015368) #28	SNX13 (ENSSSCG00000024761) #30	AHR (ENSSSCG00000030484) #32	AGR2 (ENSSSCG00000015363) #34	TSPAN13 (ENSSSCG00000015362) #33	BZW2 (ENSSSCG00000023118) #35	ANKMY2 (ENSSSCG00000015360) #36	LRRC72 (ENSSSCG00000015361)	SOSTDC1 (ENSSSCG00000021126)	ENSSSCG00000032864	CRPPA (ENSSSCG00000015358)
Chacoan peccary	MODERN SPECIES	100	IGF2BP3 (ENSCWAG00000001238)	MALSU1 (ENSCWAG00000001279)	GPNMB (ENSCWAG00000001294)	NUP42 (ENSCWAG00000001329)	KLHL7 (ENSCWAG00000001386)	HYCC1 (ENSCWAG00000001425) #8	TOMM7 (ENSCWAG00000001462) #10	IL6 (ENSCWAG00000001472) #11	RAPGEF5 (ENSCWAG00000001550) #14	CDCA7L (ENSCWAG00000001771) #15	DNAH11 (ENSCWAG00000001922) #17	SP4 (ENSCWAG00000002318) #18	SP8 (ENSCWAG00000002346) #19	ABCB5 (ENSCWAG00000002372) #20	ITGB8 (ENSCWAG00000002423) #21	MACC1 (ENSCWAG00000002457) #22	TMEM196 (ENSCWAG00000002480) #24	POLR1F (ENSCWAG00000002503) #25	FERD3L (ENSCWAG00000002512) #26	TWIST1 (ENSCWAG00000002519) #27	HDAC9 (ENSCWAG00000002543) #28	ENSCWAG00000002602 ##29	SNX13 (ENSCWAG00000002619) #30	AHR (ENSCWAG00000002645) #32	AGR3 (ENSCWAG00000002657) ##34	AGR2 (ENSCWAG00000002684) #34	TSPAN13 (ENSCWAG00000002711) #33	BZW2 (ENSCWAG00000002731) #35	ENSCWAG00000002763	ANKMY2 (ENSCWAG00000002772) #36	LRRC72 (ENSCWAG00000002793)
Artiodactyla_a	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Artiodactyla_b	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Cetacea	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000166333	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Odontoceti	ANCESTRAL SPECIES	12	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000166333	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01000000221772	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Odontoceti_a	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000166333	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01000000221772	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Odontoceti_b	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000166333	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01000000221772	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Vaquita	MODERN SPECIES	20	NUP42 (ENSPSNG00000009532)	KLHL7 (ENSPSNG00000009482)	HYCC1 (ENSPSNG00000009328) #8	IL6 (ENSPSNG00000009204) #11	RAPGEF5 (ENSPSNG00000008908) #14	CDCA7L (ENSPSNG00000008676) #15	DNAH11 (ENSPSNG00000007306) #17	ENSPSNG00000007110	SP4 (ENSPSNG00000007062) #18	ENSPSNG00000006887	SP8 (ENSPSNG00000006838) #19	ENSPSNG00000009873 #20	ENSPSNG00000009781 #20	ENSPSNG00000009751	ITGB8 (ENSPSNG00000009703) #21	MACC1 (ENSPSNG00000009595) #22	TMEM196 (ENSPSNG00000009438) #24	POLR1F (ENSPSNG00000009354) #25	ENSPSNG00000009323	FERD3L (ENSPSNG00000009256) #26	TWIST1 (ENSPSNG00000009224) #27	ENSPSNG00000009173	HDAC9 (ENSPSNG00000009029) #28	SNX13 (ENSPSNG00000008877) #30	AHR (ENSPSNG00000008778) #32	AGR3 (ENSPSNG00000008700) ##34	AGR2 (ENSPSNG00000008587) #34	TSPAN13 (ENSPSNG00000008556) #33	BZW2 (ENSPSNG00000008447) #35	ANKMY2 (ENSPSNG00000008375) #36	LRRC72 (ENSPSNG00000008276)
Monodontidae	ANCESTRAL SPECIES	12	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01000000221772	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Narwhal	MODERN SPECIES	306	NUP42 (ENSMMNG00015013671)	KLHL7 (ENSMMNG00015013694)	HYCC1 (ENSMMNG00015013717) #8	ENSMMNG00015013758 #10	IL6 (ENSMMNG00015013785) #11	RAPGEF5 (ENSMMNG00015013835) #14	CDCA7L (ENSMMNG00015013916) #15	DNAH11 (ENSMMNG00015014124) #17	SP4 (ENSMMNG00015014456) #18	ENSMMNG00015014468	ENSMMNG00015014481	SP8 (ENSMMNG00015014490) #19	ENSMMNG00015014504 #20	ENSMMNG00015014524 #20	ITGB8 (ENSMMNG00015014541) #21	MACC1 (ENSMMNG00015014571) #22	TMEM196 (ENSMMNG00015014600) #24	POLR1F (ENSMMNG00015005418) #25	FERD3L (ENSMMNG00015005424) #26	TWIST1 (ENSMMNG00015005433) #27	ENSMMNG00015005446	HDAC9 (ENSMMNG00015005496) #28	ENSMMNG00015005627	SNX13 (ENSMMNG00015005684) #30	AHR (ENSMMNG00015005766) #32	AGR3 (ENSMMNG00015005889) ##34	AGR2 (ENSMMNG00015005919) #34	TSPAN13 (ENSMMNG00015005939) #33	BZW2 (ENSMMNG00015005981) #35	ANKMY2 (ENSMMNG00015006034) #36	LRRC72 (ENSMMNG00015006074)
Dolphin	MODERN SPECIES	2305															ITGB8 (ENSTTRG00000015182) #21	MACC1 (ENSTTRG00000015174) #22
Blue whale	MODERN SPECIES	20	MALSU1 (ENSBMSG00010007370)	GPNMB (ENSBMSG00010007358)	NUP42 (ENSBMSG00010007347)	KLHL7 (ENSBMSG00010007329)	HYCC1 (ENSBMSG00010007306) #8	ENSBMSG00010007284 #10	IL6 (ENSBMSG00010007260) #11	RAPGEF5 (ENSBMSG00010007194) #14	CDCA7L (ENSBMSG00010007132) #15	DNAH11 (ENSBMSG00010006886) #17	ENSBMSG00010006798	SP4 (ENSBMSG00010006784) #18	SP8 (ENSBMSG00010006762) #19	ABCB5 (ENSBMSG00010006722) #20	ITGB8 (ENSBMSG00010006675) #21	MACC1 (ENSBMSG00010006649) #22	ENSBMSG00010006634	TMEM196 (ENSBMSG00010006606) #24	POLR1F (ENSBMSG00010006586) #25	FERD3L (ENSBMSG00010006572) #26	TWIST1 (ENSBMSG00010006562) #27	ENSBMSG00010006554	HDAC9 (ENSBMSG00010006273) #28	ENSBMSG00010006178 ##29	SNX13 (ENSBMSG00010006158) #30	AHR (ENSBMSG00010006134) #32	AGR3 (ENSBMSG00010006105) ##34	AGR2 (ENSBMSG00010006058) #34	TSPAN13 (ENSBMSG00010006035) #33	BZW2 (ENSBMSG00010006018) #35	ANKMY2 (ENSBMSG00010005991) #36
Pecora	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Percora_a	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Bovidae	ANCESTRAL SPECIES	12	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Caprinae	ANCESTRAL SPECIES	10	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Rambouillet Sheep	MODERN SPECIES	20	IGF2BP3 (ENSOARG00020006907)	MALSU1 (ENSOARG00020006835)	GPNMB (ENSOARG00020006751)	NUP42 (ENSOARG00020006652)	KLHL7 (ENSOARG00020006541)	FAM126A (ENSOARG00020006243) #8	TOMM7 (ENSOARG00020006206) #10	IL6 (ENSOARG00020006183) #11	RAPGEF5 (ENSOARG00020005723) #14	CDCA7L (ENSOARG00020005494) #15	DNAH11 (ENSOARG00020003395) #17	SP4 (ENSOARG00020003087) #18	SP8 (ENSOARG00020003038) #19	ABCB5 (ENSOARG00020002948) #20	ITGB8 (ENSOARG00020002879) #21	MACC1 (ENSOARG00020002851) #22	TMEM196 (ENSOARG00020002822) #24	POLR1F (ENSOARG00020002814) #25	FERD3L (ENSOARG00020002801) #26	TWIST1 (ENSOARG00020002796) #27	ENSOARG00020002790	HDAC9 (ENSOARG00020002586) #28	PRPS1L1 (ENSOARG00020002500) #29	SNX13 (ENSOARG00020002353) #30	AHR (ENSOARG00020002260) #32	AGR3 (ENSOARG00020002223) ##34	AGR2 (ENSOARG00020002209) #34	TSPAN13 (ENSOARG00020002191) #33	BZW2 (ENSOARG00020002131) #35	ANKMY2 (ENSOARG00020002090) #36	LRRC72 (ENSOARG00020002072)
Goat	MODERN SPECIES	23	ENSCHIG00000002492	GPNMB (ENSCHIG00000022609)	NUP42 (ENSCHIG00000009608)	ENSCHIG00000026932	HYCC1 (ENSCHIG00000014509) #8	TOMM7 (ENSCHIG00000023448) #10	IL6 (ENSCHIG00000012291) #11	RAPGEF5 (ENSCHIG00000003129) #14	CDCA7L (ENSCHIG00000012867) #15	DNAH11 (ENSCHIG00000011401) #17	SP4 (ENSCHIG00000009631) #18	SP8 (ENSCHIG00000010739) #19	ABCB5 (ENSCHIG00000012373) #20	ENSCHIG00000008550	ITGB8 (ENSCHIG00000019429) #21	MACC1 (ENSCHIG00000015533) #22	TMEM196 (ENSCHIG00000024424) #24	POLR1F (ENSCHIG00000024078) #25	FERD3L (ENSCHIG00000010496) #26	ENSCHIG00000012294	HDAC9 (ENSCHIG00000025824) #28	ENSCHIG00000020379	PRPS1L1 (ENSCHIG00000008267) #29	SNX13 (ENSCHIG00000014483) #30	AHR (ENSCHIG00000019440) #32	ENSCHIG00000022015	ENSCHIG00000025779	AGR3 (ENSCHIG00000018002) ##34	AGR2 (ENSCHIG00000011890) #34	ENSCHIG00000014624 #33	BZW2 (ENSCHIG00000020691) #35
Bovinae	ANCESTRAL SPECIES	8	ENSGT00390000000118	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
American bison	MODERN SPECIES	2746															ITGB8 (ENSBBBG00000014566) #21	MACC1 (ENSBBBG00000009133) #22	ENSBBBG00000008586
Bos	ANCESTRAL SPECIES	8	ENSGT00390000000118	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000000118	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000014833.c #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT01100000263504.a.b.b.a.b	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00940000164207	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Cow	MODERN SPECIES	23	NUP42 (ENSBTAG00000016014)	ENSBTAG00000049132	KLHL7 (ENSBTAG00000016010)	HYCC1 (ENSBTAG00000004575) #8	ENSBTAG00000033806	TOMM7 (ENSBTAG00000051150) #10	IL6 (ENSBTAG00000014921) #11	RAPGEF5 (ENSBTAG00000015539) #14	CDCA7L (ENSBTAG00000004976) #15	DNAH11 (ENSBTAG00000013078) #17	SP4 (ENSBTAG00000014389) #18	ENSBTAG00000045673	SP8 (ENSBTAG00000002604) #19	ABCB5 (ENSBTAG00000002595) #20	ITGB8 (ENSBTAG00000003709) #21	MACC1 (ENSBTAG00000003751) #22	TMEM196 (ENSBTAG00000044012) #24	POLR1F (ENSBTAG00000006721) #25	FERD3L (ENSBTAG00000039955) #26	TWIST1 (ENSBTAG00000046922) #27	HDAC9 (ENSBTAG00000003808) #28	PRPS1L1 (ENSBTAG00000033954) #29	SNX13 (ENSBTAG00000014074) #30	AHR (ENSBTAG00000007746) #32	ENSBTAG00000054646	AGR3 (ENSBTAG00000045578) ##34	AGR2 (ENSBTAG00000024406) #34	TSPAN13 (ENSBTAG00000012805) #33	BZW2 (ENSBTAG00000014262) #35	ANKMY2 (ENSBTAG00000010980) #36	LRRC72 (ENSBTAG00000034091)
Hybrid Bos Indicus	MODERN SPECIES	23	GPNMB (ENSBIXG00005020528)	NUP42 (ENSBIXG00005020467)	ENSBIXG00005020450	HYCC1 (ENSBIXG00005020386) #8	ENSBIXG00005020345	ENSBIXG00005003415 #10	IL6 (ENSBIXG00005003399) #11	RAPGEF5 (ENSBIXG00005003316) #14	CDCA7L (ENSBIXG00005019995) #15	DNAH11 (ENSBIXG00005005738) #17	SP4 (ENSBIXG00005003251) #18	ENSBIXG00005019802	SP8 (ENSBIXG00005003233) #19	ABCB5 (ENSBIXG00005007058) #20	ITGB8 (ENSBIXG00005019604) #21	MACC1 (ENSBIXG00005003175) #22	POLR1F (ENSBIXG00005019440) #25	FERD3L (ENSBIXG00005019410) #26	TWIST1 (ENSBIXG00005003158) #27	HDAC9 (ENSBIXG00005003141) #28	PRPS1L1 (ENSBIXG00005019014) #29	SNX13 (ENSBIXG00005018950) #30	AHR (ENSBIXG00005018791) #32	ENSBIXG00005003040	AGR3 (ENSBIXG00005018725) ##34	AGR2 (ENSBIXG00005018693) #34	TSPAN13 (ENSBIXG00005018680) #33	ENSBIXG00005018651	BZW2 (ENSBIXG00005018638) #35	ANKMY2 (ENSBIXG00005018589) #36	LRRC72 (ENSBIXG00005018544)
Bos_a	ANCESTRAL SPECIES	12	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00510000046985.h.b.a.a.a	ENSGT00940000155602.j	ENSGT00390000011295.b #8	ENSGT00950000183087.A.a.a.a.a.a.a	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Domestic yak	MODERN SPECIES	23	ENSBGRG00000000725	HYCC1 (ENSBGRG00000000758) #8	ENSBGRG00000000814	ENSBGRG00000000842	ENSBGRG00000000852	TOMM7 (ENSBGRG00000000858) #10	IL6 (ENSBGRG00000000868) #11	RAPGEF5 (ENSBGRG00000000895) #14	CDCA7L (ENSBGRG00000000922) #15	DNAH11 (ENSBGRG00000001054) #17	SP4 (ENSBGRG00000001146) #18	ENSBGRG00000001176	SP8 (ENSBGRG00000001195) #19	ABCB5 (ENSBGRG00000001233) #20	ITGB8 (ENSBGRG00000001411) #21	MACC1 (ENSBGRG00000001496) #22	POLR1F (ENSBGRG00000001608) #25	ENSBGRG00000001639 #26	ENSBGRG00000001648 #26	TWIST1 (ENSBGRG00000001656) #27	HDAC9 (ENSBGRG00000001751) #28	ENSBGRG00000002126	PRPS1L1 (ENSBGRG00000002154) #29	SNX13 (ENSBGRG00000002167) #30	AHR (ENSBGRG00000002193) #32	AGR3 (ENSBGRG00000002262) ##34	TSPAN13 (ENSBGRG00000002298) #33	AGR2 (ENSBGRG00000002340) #34	BZW2 (ENSBGRG00000002382) #35	ANKMY2 (ENSBGRG00000002430) #36	LRRC72 (ENSBGRG00000002501)
Wild yak	MODERN SPECIES	2238														ENSBMUG00000017078	ITGB8 (ENSBMUG00000017068) #21	MACC1 (ENSBMUG00000017054) #22
Siberian musk deer	MODERN SPECIES	88	IGF2BP3 (ENSMMSG00000024420)	MALSU1 (ENSMMSG00000024421)	GPNMB (ENSMMSG00000024422)	NUP42 (ENSMMSG00000024423)	ENSMMSG00000024424	HYCC1 (ENSMMSG00000024425) #8	TOMM7 (ENSMMSG00000024427) #10	ENSMMSG00000024428 #11	RAPGEF5 (ENSMMSG00000024430) #14	CDCA7L (ENSMMSG00000024433) #15	DNAH11 (ENSMMSG00000024436) #17	SP4 (ENSMMSG00000024444) #18	SP8 (ENSMMSG00000024446) #19	ABCB5 (ENSMMSG00000024447) #20	ITGB8 (ENSMMSG00000024452) #21	MACC1 (ENSMMSG00000024454) #22	TMEM196 (ENSMMSG00000024455) #24	POLR1F (ENSMMSG00000024457) #25	FERD3L (ENSMMSG00000024458) #26	TWIST1 (ENSMMSG00000024459) #27	HDAC9 (ENSMMSG00000024464) #28	PRPS1L1 (ENSMMSG00000024467) #29	SNX13 (ENSMMSG00000024469) #30	AHR (ENSMMSG00000024470) #32	AGR3 (ENSMMSG00000024472) ##34	AGR2 (ENSMMSG00000024474) #34	TSPAN13 (ENSMMSG00000024475) #33	BZW2 (ENSMMSG00000024478) #35	ANKMY2 (ENSMMSG00000024481) #36	LRRC72 (ENSMMSG00000024485)	SOSTDC1 (ENSMMSG00000024487)
Yarkand deer	MODERN SPECIES	9	ENSCHYG00000012174	ENSCHYG00000012166	ENSCHYG00000012138	HYCC1 (ENSCHYG00000011929) #8	ENSCHYG00000011839 #10	ENSCHYG00000011799 #11	RAPGEF5 (ENSCHYG00000011187) #14	CDCA7L (ENSCHYG00000010925) #15	DNAH11 (ENSCHYG00000010690) #17	SP4 (ENSCHYG00000010584) #18	ENSCHYG00000010564	ENSCHYG00000010545	SP8 (ENSCHYG00000010508) #19	ABCB5 (ENSCHYG00000010073) #20	ITGB8 (ENSCHYG00000009946) #21	MACC1 (ENSCHYG00000009890) #22	ENSCHYG00000009866	TMEM196 (ENSCHYG00000009756) #24	POLR1F (ENSCHYG00000009700) #25	FERD3L (ENSCHYG00000009629) #26	ENSCHYG00000009595	ENSCHYG00000009538	HDAC9 (ENSCHYG00000008905) #28	PRPS1L1 (ENSCHYG00000008702) #29	SNX13 (ENSCHYG00000008391) #30	AHR (ENSCHYG00000008314) #32	ENSCHYG00000008294	AGR3 (ENSCHYG00000008239) ##34	AGR2 (ENSCHYG00000008193) #34	TSPAN13 (ENSCHYG00000008162) #33	ENSCHYG00000008119 #35
Camelidae	ANCESTRAL SPECIES	2	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Arabian camel	MODERN SPECIES	33	IGF2BP3 (ENSCDRG00005000158)	MALSU1 (ENSCDRG00005000140)	GPNMB (ENSCDRG00005000107)	KLHL7 (ENSCDRG00005007279)	ENSCDRG00005007248	HYCC1 (ENSCDRG00005007124) #8	IL6 (ENSCDRG00005006980) #11	TOMM7 (ENSCDRG00005006889) #10	RAPGEF5 (ENSCDRG00005006590) #14	CDCA7L (ENSCDRG00005006381) #15	DNAH11 (ENSCDRG00005006248) #17	SP4 (ENSCDRG00005006199) #18	SP8 (ENSCDRG00005006175) #19	ABCB5 (ENSCDRG00005006056) #20	ITGB8 (ENSCDRG00005006022) #21	MACC1 (ENSCDRG00005005995) #22	TMEM196 (ENSCDRG00005005947) #24	POLR1F (ENSCDRG00005005934) #25	ENSCDRG00005005921	FERD3L (ENSCDRG00005005910) #26	TWIST1 (ENSCDRG00005005895) #27	ENSCDRG00005005889	HDAC9 (ENSCDRG00005005657) #28	PRPS1L1 (ENSCDRG00005005612) #29	SNX13 (ENSCDRG00005005525) #30	AHR (ENSCDRG00005005491) #32	AGR3 (ENSCDRG00005005423) ##34	AGR2 (ENSCDRG00005005382) #34	TSPAN13 (ENSCDRG00005005346) #33	BZW2 (ENSCDRG00005005277) #35	ANKMY2 (ENSCDRG00005005234) #36
Alpaca	MODERN SPECIES	991											CDCA7L (ENSVPAG00000002091) #15	DNAH11 (ENSVPAG00000002089) #17	SP8 (ENSVPAG00000002087) #19	ABCB5 (ENSVPAG00000002086) #20	ITGB8 (ENSVPAG00000002085) #21	MACC1 (ENSVPAG00000002084) #22	TMEM196 (ENSVPAG00000002082) #24	POLR1F (ENSVPAG00000002079) #25
Laurasiatheria_b	ANCESTRAL SPECIES	14	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Carnivora	ANCESTRAL SPECIES	15	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Caniformia	ANCESTRAL SPECIES	11	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Caniformia_b	ANCESTRAL SPECIES	9	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Ursidae	ANCESTRAL SPECIES	12	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B.f	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01020000230346.C.f	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b.t #34	ENSGT00940000157010 #33	ENSGT00390000012561.a.k #35	ENSGT00390000016820 #36
Ursus	ANCESTRAL SPECIES	31	ENSGT00390000015035	ENSGT00950000183188.B.f	ENSGT00940000165902.c	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT01020000230346.C.f	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b.t #34	ENSGT00940000157010 #33	ENSGT00390000012561.a.k #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
American black bear	MODERN SPECIES	2192															ITGB8 (ENSUAMG00000001425) #21	MACC1 (ENSUAMG00000001498) #22
Polar bear	MODERN SPECIES	133	MALSU1 (ENSUMAG00000000343)	GPNMB (ENSUMAG00000000319)	ENSUMAG00000000307	NUP42 (ENSUMAG00000000302)	KLHL7 (ENSUMAG00000000283)	HYCC1 (ENSUMAG00000000269) #8	ENSUMAG00000000168 #10	IL6 (ENSUMAG00000000079) #11	RAPGEF5 (ENSUMAG00000022363) #14	CDCA7L (ENSUMAG00000022358) #15	DNAH11 (ENSUMAG00000022264) #17	SP4 (ENSUMAG00000022248) #18	ENSUMAG00000022244	ABCB5 (ENSUMAG00000022237) #20	ITGB8 (ENSUMAG00000022227) #21	MACC1 (ENSUMAG00000022210) #22	ENSUMAG00000022206	POLR1F (ENSUMAG00000022203) #25	FERD3L (ENSUMAG00000022200) #26	ENSUMAG00000022199 #27	ENSUMAG00000022197	ENSUMAG00000022196	ENSUMAG00000022191	HDAC9 (ENSUMAG00000022181) #28	SNX13 (ENSUMAG00000022159) #30	AHR (ENSUMAG00000022084) #32	AGR2 (ENSUMAG00000022071) #34	TSPAN13 (ENSUMAG00000022069) #33	BZW2 (ENSUMAG00000022044) #35	ANKMY2 (ENSUMAG00000022038) #36	LRRC72 (ENSUMAG00000022035)
Giant Panda	MODERN SPECIES		MALSU1 (ENSAMEG00000003483)	IGF2BP3 (ENSAMEG00000003485)	GPNMB (ENSAMEG00000003423)	NUP42 (ENSAMEG00000003404)	KLHL7 (ENSAMEG00000003365)	HYCC1 (ENSAMEG00000003342) #8	IL6 (ENSAMEG00000003313) #11	ENSAMEG00000030960 #10	RAPGEF5 (ENSAMEG00000004037) #14	CDCA7L (ENSAMEG00000004021) #15	DNAH11 (ENSAMEG00000003851) #17	SP4 (ENSAMEG00000016154) #18	ENSAMEG00000031017	ABCB5 (ENSAMEG00000008608) #20	ITGB8 (ENSAMEG00000008573) #21	MACC1 (ENSAMEG00000008564) #22	TMEM196 (ENSAMEG00000029520) #24	POLR1F (ENSAMEG00000008558) #25	FERD3L (ENSAMEG00000019030) #26	ENSAMEG00000029364	ENSAMEG00000024869	HDAC9 (ENSAMEG00000008517) #28	PRPS1L1 (ENSAMEG00000018989) #29	SNX13 (ENSAMEG00000010639) #30	AHR (ENSAMEG00000010559) #32	AGR2 (ENSAMEG00000010541) #34	TSPAN13 (ENSAMEG00000010524) #33	ENSAMEG00000010473 #35	ANKMY2 (ENSAMEG00000010451) #36	LRRC72 (ENSAMEG00000010446)	SOSTDC1 (ENSAMEG00000025181)
Mustelinae	ANCESTRAL SPECIES	9	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Ferret	MODERN SPECIES	171	MALSU1 (ENSMPUG00000013534)	GPNMB (ENSMPUG00000013540)	NUP42 (ENSMPUG00000013548)	KLHL7 (ENSMPUG00000013580)	HYCC1 (ENSMPUG00000013583) #8	TOMM7 (ENSMPUG00000013589) #10	IL6 (ENSMPUG00000013592) #11	RAPGEF5 (ENSMPUG00000013597) #14	CDCA7L (ENSMPUG00000013603) #15	DNAH11 (ENSMPUG00000013607) #17	SP4 (ENSMPUG00000013911) #18	ENSMPUG00000013913	SP8 (ENSMPUG00000013919) #19	ABCB5 (ENSMPUG00000013926) #20	ITGB8 (ENSMPUG00000013932) #21	MACC1 (ENSMPUG00000013939) #22	TMEM196 (ENSMPUG00000013945) #24	POLR1F (ENSMPUG00000013948) #25	HDAC9 (ENSMPUG00000013952) #28	ENSMPUG00000013956	PRPS1L1 (ENSMPUG00000019297) #29	SNX13 (ENSMPUG00000013958) #30	ENSMPUG00000019299	AHR (ENSMPUG00000013964) #32	ENSMPUG00000013969	ENSMPUG00000013972	AGR2 (ENSMPUG00000013980) #34	TSPAN13 (ENSMPUG00000013982) #33	BZW2 (ENSMPUG00000014004) #35	ANKMY2 (ENSMPUG00000014010) #36	ENSMPUG00000014014 #37
American mink	MODERN SPECIES	24	MALSU1 (ENSNVIG00000013104)	GPNMB (ENSNVIG00000013107)	NUP42 (ENSNVIG00000013146)	KLHL7 (ENSNVIG00000013165)	HYCC1 (ENSNVIG00000013205) #8	ENSNVIG00000013324	IL6 (ENSNVIG00000013327) #11	RAPGEF5 (ENSNVIG00000013339) #14	CDCA7L (ENSNVIG00000013461) #15	DNAH11 (ENSNVIG00000013532) #17	SP4 (ENSNVIG00000013987) #18	ENSNVIG00000014010	SP8 (ENSNVIG00000014018) #19	ABCB5 (ENSNVIG00000014039) #20	ITGB8 (ENSNVIG00000014094) #21	MACC1 (ENSNVIG00000014137) #22	TMEM196 (ENSNVIG00000014172) #24	POLR1F (ENSNVIG00000014208) #25	FERD3L (ENSNVIG00000014221) #26	TWIST1 (ENSNVIG00000014227) #27	ENSNVIG00000014234	HDAC9 (ENSNVIG00000014244) #28	PRPS1L1 (ENSNVIG00000014716) #29	SNX13 (ENSNVIG00000014729) #30	AHR (ENSNVIG00000014868) #32	ENSNVIG00000014908	AGR2 (ENSNVIG00000014918) #34	TSN13 (ENSNVIG00000014934) #33	BZW2 (ENSNVIG00000014944) #35	ANKMY2 (ENSNVIG00000015020) #36	LRRC72 (ENSNVIG00000015048)
Canidae	ANCESTRAL SPECIES	22	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00990000204321.a	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182803.B.d.a.i.a #29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Canis_lupus	ANCESTRAL SPECIES	24	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00990000204321.a	ENSGT00390000000076.i	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00910000147441
Dog	MODERN SPECIES	5	KLHL7 (ENSCAFG00845009174)	ENSCAFG00845009158	ENSCAFG00845009143	FAM126A (ENSCAFG00845008950) #8	TOMM7 (ENSCAFG00845008876) #10	IL6 (ENSCAFG00845008825) #11	ENSCAFG00845008800	RAPGEF5 (ENSCAFG00845008384) #14	CDCA7L (ENSCAFG00845008168) #15	DNAH11 (ENSCAFG00845007920) #17	SP4 (ENSCAFG00845007811) #18	SP8 (ENSCAFG00845007758) #19	ABCB5 (ENSCAFG00845007641) #20	ENSCAFG00845007578	ITGB8 (ENSCAFG00845007494) #21	MACC1 (ENSCAFG00845007266) #22	TMEM196 (ENSCAFG00845007184) #24	POLR1F (ENSCAFG00845007146) #25	FERD3L (ENSCAFG00845007118) #26	TWIST1 (ENSCAFG00845007076) #27	HDAC9 (ENSCAFG00845006703) #28	PRPS1L1 (ENSCAFG00845006516) #29	SNX13 (ENSCAFG00845006012) #30	ENSCAFG00845005897	AHR (ENSCAFG00845005867) #32	AGR2 (ENSCAFG00845005787) #34	TSPAN13 (ENSCAFG00845005750) #33	BZW2 (ENSCAFG00845005705) #35	ANKMY2 (ENSCAFG00845005664) #36	LRRC72 (ENSCAFG00845005626)	SOSTDC1 (ENSCAFG00845005605)
Dingo	MODERN SPECIES	288	GPNMB (ENSCAFG00020002698)	NUP42 (ENSCAFG00020002692)	KLHL7 (ENSCAFG00020002690)	ENSCAFG00020002686	ENSCAFG00020002684	ENSCAFG00020002679 #8	ENSCAFG00020002667 #10	IL6 (ENSCAFG00020002653) #11	RAPGEF5 (ENSCAFG00020002605) #14	CDCA7L (ENSCAFG00020002598) #15	DNAH11 (ENSCAFG00020002292) #17	SP4 (ENSCAFG00020002253) #18	ABCB5 (ENSCAFG00020002187) #20	ENSCAFG00020002172	ITGB8 (ENSCAFG00020002163) #21	MACC1 (ENSCAFG00020002157) #22	ENSCAFG00020002143	POLR1F (ENSCAFG00020002140) #25	FERD3L (ENSCAFG00020002139) #26	TWIST1 (ENSCAFG00020002135) #27	HDAC9 (ENSCAFG00020001908) #28	PRPS1L1 (ENSCAFG00020001874) #29	SNX13 (ENSCAFG00020001653) #30	AHR (ENSCAFG00020001575) #32	AGR2 (ENSCAFG00020001560) #34	TSPAN13 (ENSCAFG00020001556) #33	BZW2 (ENSCAFG00020001541) #35	ANKMY2 (ENSCAFG00020001533) #36	LRRC72 (ENSCAFG00020001514)	SOSTDC1 (ENSCAFG00020001510)	ENSCAFG00020001504
Red fox	MODERN SPECIES	12	TRA2A (ENSVVUG00000001045)	IGF2BP3 (ENSVVUG00000001063)	GPNMB (ENSVVUG00000001105)	KLHL7 (ENSVVUG00000001128)	ENSVVUG00000001178	FAM126A (ENSVVUG00000001204) #8	ENSVVUG00000001303 #10	IL6 (ENSVVUG00000001319) #11	RAPGEF5 (ENSVVUG00000001380) #14	CDCA7L (ENSVVUG00000001402) #15	DNAH11 (ENSVVUG00000002278) #17	SP4 (ENSVVUG00000008046) #18	SP8 (ENSVVUG00000008108) #19	ABCB5 (ENSVVUG00000008164) #20	ITGB8 (ENSVVUG00000008336) #21	MACC1 (ENSVVUG00000008370) #22	TMEM196 (ENSVVUG00000008383)	TWISTNB (ENSVVUG00000008386) #25	FERD3L (ENSVVUG00000008413) #26	ENSVVUG00000008415	HDAC9 (ENSVVUG00000008429) #28	ENSVVUG00000008515	PRPS1L1 (ENSVVUG00000008539) #29	SNX13 (ENSVVUG00000008580) #30	ENSVVUG00000008596	AHR (ENSVVUG00000008606) #32	AGR2 (ENSVVUG00000008636) #34	TSPAN13 (ENSVVUG00000008663) #33	BZW2 (ENSVVUG00000008686) #35	ANKMY2 (ENSVVUG00000008716) #36	LRRC72 (ENSVVUG00000008740)
Felidae	ANCESTRAL SPECIES	13	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00990000212408	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010.c #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Panthera	ANCESTRAL SPECIES	1	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00990000212408	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010.c #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Tiger	MODERN SPECIES	293	ENSPTIG00000005612	IGF2BP3 (ENSPTIG00000006021)	MALSU1 (ENSPTIG00000007567)	GPNMB (ENSPTIG00000008247)	NUP42 (ENSPTIG00000009583)	KLHL7 (ENSPTIG00000010367)	HYCC1 (ENSPTIG00000015096) #8	TOMM7 (ENSPTIG00000015954) #10	IL6 (ENSPTIG00000016661) #11	RAPGEF5 (ENSPTIG00000018422) #14	CDCA7L (ENSPTIG00000006990) #15	ENSPTIG00000007171	SP4 (ENSPTIG00000016118) #18	ABCB5 (ENSPTIG00000016699) #20	ITGB8 (ENSPTIG00000018464) #21	MACC1 (ENSPTIG00000019121) #22	TMEM196 (ENSPTIG00000019937) #24	POLR1F (ENSPTIG00000021539) #25	FERD3L (ENSPTIG00000007267) #26	HDAC9 (ENSPTIG00000007997) #28	PRPS1L1 (ENSPTIG00000007401) #29	SNX13 (ENSPTIG00000021589) #30	AHR (ENSPTIG00000008421) #32	AGR2 (ENSPTIG00000010330) #34	TSPAN13 (ENSPTIG00000012079) #33	BZW2 (ENSPTIG00000013171) #35	ANKMY2 (ENSPTIG00000020367) #36	LRRC72 (ENSPTIG00000006972)	SOSTDC1 (ENSPTIG00000007605)	CRPPA (ENSPTIG00000009298)	MEOX2 (ENSPTIG00000010758)
Panthera_a	ANCESTRAL SPECIES		ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00990000212408	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010.c #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
lion	MODERN SPECIES	2	MALSU1 (ENSPLOG00000006242)	GPNMB (ENSPLOG00000006176)	NUP42 (ENSPLOG00000006139)	KLHL7 (ENSPLOG00000006071)	HYCC1 (ENSPLOG00000005987) #8	TOMM7 (ENSPLOG00000005923) #10	IL6 (ENSPLOG00000005885) #11	RAPGEF5 (ENSPLOG00000005752) #14	CDCA7L (ENSPLOG00000005663) #15	ENSPLOG00000005631	DNAH11 (ENSPLOG00000005484) #17	SP4 (ENSPLOG00000005405) #18	SP8 (ENSPLOG00000005374) #19	ABCB5 (ENSPLOG00000005325) #20	ITGB8 (ENSPLOG00000005294) #21	MACC1 (ENSPLOG00000005282) #22	TMEM196 (ENSPLOG00000005271) #24	POLR1F (ENSPLOG00000005258) #25	FERD3L (ENSPLOG00000005253) #26	TWIST1 (ENSPLOG00000005248) #27	ENSPLOG00000005242	ENSPLOG00000005234	HDAC9 (ENSPLOG00000005066) #28	PRPS1L1 (ENSPLOG00000004870) #29	SNX13 (ENSPLOG00000004829) #30	AHR (ENSPLOG00000004789) #32	AGR2 (ENSPLOG00000004751) #34	ENSPLOG00000004728 #33	BZW2 (ENSPLOG00000004703) #35	ANKMY2 (ENSPLOG00000021257) #36	LRRC72 (ENSPLOG00000021220)
leopard	MODERN SPECIES	9	MALSU1 (ENSPPRG00000019365)	GPNMB (ENSPPRG00000022277)	NUP42 (ENSPPRG00000024188)	KLHL7 (ENSPPRG00000023124)	HYCC1 (ENSPPRG00000000882) #8	TOMM7 (ENSPPRG00000001184) #10	IL6 (ENSPPRG00000001365) #11	ENSPPRG00000002217 #14	ENSPPRG00000004234 #14	CDCA7L (ENSPPRG00000005070) #15	DNAH11 (ENSPPRG00000001981) #17	SP4 (ENSPPRG00000002366) #18	SP8 (ENSPPRG00000002787) #19	ABCB5 (ENSPPRG00000003288) #20	ITGB8 (ENSPPRG00000003937) #21	MACC1 (ENSPPRG00000004920) #22	TMEM196 (ENSPPRG00000005829) #24	POLR1F (ENSPPRG00000005877) #25	FERD3L (ENSPPRG00000021108) #26	TWIST1 (ENSPPRG00000021134) #27	ENSPPRG00000008154	HDAC9 (ENSPPRG00000016351) #28	PRPS1L1 (ENSPPRG00000021597) #29	SNX13 (ENSPPRG00000024953) #30	AHR (ENSPPRG00000024905) #32	AGR2 (ENSPPRG00000024722) #34	TSPAN13 (ENSPPRG00000024563) #33	BZW2 (ENSPPRG00000023909) #35	ANKMY2 (ENSPPRG00000023052) #36	LRRC72 (ENSPPRG00000022927)	SOSTDC1 (ENSPPRG00000022631)
Cat	MODERN SPECIES	1	IGF2BP3 (ENSFCAG00000030786)	MALSU1 (ENSFCAG00000029829)	GPNMB (ENSFCAG00000026148)	KLHL7 (ENSFCAG00000005805)	HYCC1 (ENSFCAG00000011016) #8	TOMM7 (ENSFCAG00000032204) #10	IL6 (ENSFCAG00000009165) #11	ENSFCAG00000047404	RAPGEF5 (ENSFCAG00000046261) #14	CDCA7L (ENSFCAG00000014417) #15	DNAH11 (ENSFCAG00000014410) #17	SP4 (ENSFCAG00000028758) #18	SP8 (ENSFCAG00000044413) #19	ABCB5 (ENSFCAG00000022127) #20	ITGB8 (ENSFCAG00000006893) #21	MACC1 (ENSFCAG00000022683) #22	TMEM196 (ENSFCAG00000036423) #24	POLR1F (ENSFCAG00000025987) #25	FERD3L (ENSFCAG00000010289) #26	TWIST1 (ENSFCAG00000039287) #27	ENSFCAG00000050205	ENSFCAG00000037065	HDAC9 (ENSFCAG00000025113) #28	ENSFCAG00000048315 ##29	SNX13 (ENSFCAG00000024117) #30	AHR (ENSFCAG00000005018) #32	AGR2 (ENSFCAG00000005428) #34	TSPAN13 (ENSFCAG00000030597) #33	BZW2 (ENSFCAG00000009109) #35	ANKMY2 (ENSFCAG00000009108) #36	LRRC72 (ENSFCAG00000022872)
Laurasiatheria_c	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Equus	ANCESTRAL SPECIES	13	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000162831 #27	ENSGT00910000147712	ENSGT00940000160307 #28	ENSGT00550000074801.g.a.s	ENSGT00950000182803.B.d.a.j ##29	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36
Donkey	MODERN SPECIES		MALSU1 (ENSEASG00005021994)	GPNMB (ENSEASG00005021992)	NUP42 (ENSEASG00005035025)	KLHL7 (ENSEASG00005021979)	HYCC1 (ENSEASG00005021974) #8	TOMM7 (ENSEASG00005036304) #10	IL6 (ENSEASG00005021965) #11	ENSEASG00005021963 #14	ENSEASG00005035034 #14	CDCA7L (ENSEASG00005021958) #15	DNAH11 (ENSEASG00005021871) #17	SP4 (ENSEASG00005021731) #18	SP8 (ENSEASG00005021726) #19	ABCB5 (ENSEASG00005021722) #20	ITGB8 (ENSEASG00005021716) #21	MACC1 (ENSEASG00005021710) #22	TMEM196 (ENSEASG00005021706) #24	POLR1F (ENSEASG00005021702) #25	TWIST1 (ENSEASG00005021693) #27	ENSEASG00005021690	HDAC9 (ENSEASG00005021674) #28	ENSEASG00005030024	SNX13 (ENSEASG00005021639) #30	AHR (ENSEASG00005021632) #32	AGR3 (ENSEASG00005021631) ##34	AGR2 (ENSEASG00005038028) #34	TSPAN13 (ENSEASG00005021628) #33	ENSEASG00005021624 #35	ANKMY2 (ENSEASG00005021618) #36	LRRC72 (ENSEASG00005036050)	SOSTDC1 (ENSEASG00005038104)
Horse	MODERN SPECIES	25	HYCC1 (ENSECAG00000023479) #8	ENSECAG00000043335 #9	IL6 (ENSECAG00000016482) #11	ENSECAG00000055291	TOMM7 (ENSECAG00000021807) #10	RAPGEF5 (ENSECAG00000000395) #14	CDCA7L (ENSECAG00000022400) #15	DNAH11 (ENSECAG00000004819) #17	SP4 (ENSECAG00000023324) #18	ENSECAG00000043394	SP8 (ENSECAG00000040341) #19	ENSECAG00000054779 #20	ABCB5 (ENSECAG00000011338)	ENSECAG00000048959	ITGB8 (ENSECAG00000019215) #21	MACC1 (ENSECAG00000017364) #22	TMEM196 (ENSECAG00000015956)	POLR1F (ENSECAG00000014563) #25	ENSECAG00000029412	ENSECAG00000059503	TWIST1 (ENSECAG00000033207) #27	ENSECAG00000018100	ENSECAG00000002478 ##29	HDAC9 (ENSECAG00000018816) #28	SNX13 (ENSECAG00000021498) #30	AHR (ENSECAG00000013393) #32	AGR3 (ENSECAG00000012283) ##34	AGR2 (ENSECAG00000043283) #34	TSPAN13 (ENSECAG00000010623) #33	BZW2 (ENSECAG00000022038) #35	ANKMY2 (ENSECAG00000014046) #36
Chiroptera	ANCESTRAL SPECIES	24	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880.a #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Microchiroptera	ANCESTRAL SPECIES	24	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880.a #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Greater horseshoe bat	MODERN SPECIES	12	IGF2BP3 (ENSRFEG00010009439)	MALSU1 (ENSRFEG00010009519)	GPNMB (ENSRFEG00010009561)	KLHL7 (ENSRFEG00010009639)	HYCC1 (ENSRFEG00010009822) #8	ENSRFEG00010009909	TOMM7 (ENSRFEG00010009939) #10	IL6 (ENSRFEG00010009963) #11	RAPGEF5 (ENSRFEG00010010064) #14	CDCA7L (ENSRFEG00010010429) #15	DNAH11 (ENSRFEG00010010810) #17	SP4 (ENSRFEG00010014331) #18	SP8 (ENSRFEG00010014425) #19	ABCB5 (ENSRFEG00010014506) #20	ITGB8 (ENSRFEG00010015208) #21	MACC1 (ENSRFEG00010015272) #22	TMEM196 (ENSRFEG00010015350) #24	POLR1F (ENSRFEG00010015486) #25	FERD3L (ENSRFEG00010015525) #26	TWIST1 (ENSRFEG00010015542) #27	HDAC9 (ENSRFEG00010015571) #28	PRPS1L1 (ENSRFEG00010015977) #29	SNX13 (ENSRFEG00010016005) #30	AHR (ENSRFEG00010016099) #32	AGR3 (ENSRFEG00010016282) ##34	AGR2 (ENSRFEG00010016349) #34	TSPAN13 (ENSRFEG00010016399) #33	BZW2 (ENSRFEG00010016448) #35	ANKMY2 (ENSRFEG00010016575) #36	LRRC72 (ENSRFEG00010016613)	SOSTDC1 (ENSRFEG00010016782)
Microbat	MODERN SPECIES	952											ENSMLUG00000013142 #17	SP4 (ENSMLUG00000013137) #18	ENSMLUG00000027283	ABCB5 (ENSMLUG00000002224) #20	ITGB8 (ENSMLUG00000008896) #21	MACC1 (ENSMLUG00000008877) #22	ENSMLUG00000008871	POLR1F (ENSMLUG00000008848) #25	ENSMLUG00000006930 #26	TWIST1 (ENSMLUG00000007047) #27	HDAC9 (ENSMLUG00000006585) #28	SNX13 (ENSMLUG00000014405) #30	AHR (ENSMLUG00000000097) #32	ENSMLUG00000014948 #34	TSPAN13 (ENSMLUG00000014946) #33	BZW2 (ENSMLUG00000014943) #35	ANKMY2 (ENSMLUG00000014935) #36	LRRC72 (ENSMLUG00000014931)	SOSTDC1 (ENSMLUG00000014930)	CRPPA (ENSMLUG00000027807)	MEOX2 (ENSMLUG00000022218)
Megabat	MODERN SPECIES	7837																MACC1 (ENSPVAG00000009971) #22
Atlantogenata	ANCESTRAL SPECIES	7	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Xenarthra	ANCESTRAL SPECIES																	ENSGT00390000013151.a.b #22
Sloth	MODERN SPECIES	6670																MACC1 (ENSCHOG00000002055) #22
Afrotheria	ANCESTRAL SPECIES	5	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a	ENSGT00390000006412	ENSGT00940000154018.b
Afrotheria_a	ANCESTRAL SPECIES	5	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000161340 #20	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000164009 #37	ENSGT00390000014900.b.b.a	ENSGT00390000006412	ENSGT00940000154018.b
Elephant	MODERN SPECIES	428	IGF2BP3 (ENSLAFG00000011924)	MALSU1 (ENSLAFG00000011921)	GPNMB (ENSLAFG00000022142)	NUP42 (ENSLAFG00000007523)	KLHL7 (ENSLAFG00000007517)	HYCC1 (ENSLAFG00000007515) #8	TOMM7 (ENSLAFG00000027187) #10	IL6 (ENSLAFG00000015573) #11	RAPGEF5 (ENSLAFG00000014919) #14	CDCA7L (ENSLAFG00000017695) #15	DNAH11 (ENSLAFG00000017652) #17	SP4 (ENSLAFG00000022398) #18	ENSLAFG00000026096	ABCB5 (ENSLAFG00000011833) #20	ITGB8 (ENSLAFG00000001226) #21	MACC1 (ENSLAFG00000004099) #22	ENSLAFG00000015261	POLR1F (ENSLAFG00000008755) #25	FERD3L (ENSLAFG00000012782) #26	HDAC9 (ENSLAFG00000015187) #28	ENSLAFG00000026856 #29	SNX13 (ENSLAFG00000010912) #30	AHR (ENSLAFG00000015328) #32	AGR3 (ENSLAFG00000005961) ##34	AGR2 (ENSLAFG00000005959) #34	TSPAN13 (ENSLAFG00000005956) #33	BZW2 (ENSLAFG00000003942) #35	ANKMY2 (ENSLAFG00000003941) #36	ENSLAFG00000003939 #37	SOSTDC1 (ENSLAFG00000028775)	CRPPA (ENSLAFG00000020849)
Hyrax	MODERN SPECIES	6255																MACC1 (ENSPCAG00000010456) #22
Tenrec	MODERN SPECIES	7440																MACC1 (ENSETEG00000002394) #22
Marsupialia	ANCESTRAL SPECIES	4	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650.b #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b
Marsupialia_b	ANCESTRAL SPECIES	10	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650.b #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Diprotodontia	ANCESTRAL SPECIES	18	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650.b #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Diprotodontia_a	ANCESTRAL SPECIES	20	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650.b #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000153289.a.b	ENSGT00390000014900.b.b.a
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1036	ENSVURG00010020085	ENSVURG00010020101	ENSVURG00010020118	ENSVURG00010020126	ENSVURG00010020134	ENSVURG00010020142	ENSVURG00010020152 #8	ENSVURG00010020166 #9	ENSVURG00010020187 #10	ENSVURG00010020191 #11	ENSVURG00010020207 #14	ENSVURG00010020237 #15	ENSVURG00010020526 #17	ENSVURG00010021047 #18	ENSVURG00010021058 #21	ENSVURG00010021067 #22	ENSVURG00010021074	ENSVURG00010021077 #25	FERD3L (ENSVURG00010021081) #26	TWIST1 (ENSVURG00010021085) #27	HDAC9 (ENSVURG00010021093) #28	SNX13 (ENSVURG00010021118) #30	AHR (ENSVURG00010021144) #32	AGR3 (ENSVURG00010021154) ##34	AGR2 (ENSVURG00010021158) #34	TSPAN13 (ENSVURG00010021163) #33	BZW2 (ENSVURG00010021169) #35	ANKMY2 (ENSVURG00010021174) #36	SOSTDC1 (ENSVURG00010021178)	CRPPA (ENSVURG00010021184)	MEOX2 (ENSVURG00010021194)
Common wonbat	MODERN SPECIES	1036	ENSVURG00010001736	ENSVURG00010001806	ENSVURG00010001822	ENSVURG00010001853	ENSVURG00010001941	ENSVURG00010002036 #8	ENSVURG00010002069 #9	ENSVURG00010002145 #10	ENSVURG00010002178 #11	ENSVURG00010002211 #14	ENSVURG00010002266 #15	ENSVURG00010002508 #17	ENSVURG00010004193 #18	SP8 (ENSVURG00010004207) #19	ENSVURG00010004234 #21	ENSVURG00010004276 #22	ENSVURG00010004300	ENSVURG00010004313	ENSVURG00010004342 #25
koala	MODERN SPECIES	50	IGF2BP3 (ENSPCIG00000007929)	MALSU1 (ENSPCIG00000007943)	GPNMB (ENSPCIG00000007948)	NUP42 (ENSPCIG00000007959)	KLHL7 (ENSPCIG00000007966)	HYCC1 (ENSPCIG00000007972) #8	ENSPCIG00000033766 #9	ENSPCIG00000019076 #10	ENSPCIG00000033317 #11	RAPGEF5 (ENSPCIG00000013311) #14	CDCA7L (ENSPCIG00000007736) #15	DNAH11 (ENSPCIG00000007819) #17	SP4 (ENSPCIG00000008061) #18	SP8 (ENSPCIG00000037309) #19	ITGB8 (ENSPCIG00000025095) #21	MACC1 (ENSPCIG00000025096) #22
Wallaby	MODERN SPECIES	8978																MACC1 (ENSMEUG00000008248) #22
Tasmanian devil	MODERN SPECIES	4	IGF2BP3 (ENSSHAG00000007163)	MALSU1 (ENSSHAG00000032001)	GPNMB (ENSSHAG00000007975)	ENSSHAG00000024414	KLHL7 (ENSSHAG00000029498)	HYCC1 (ENSSHAG00000010233) #8	ENSSHAG00000030782 #9	ENSSHAG00000010703 #9	TOMM7 (ENSSHAG00000030253) #10	ENSSHAG00000011246 #11	RAPGEF5 (ENSSHAG00000013368) #14	DNAH11 (ENSSHAG00000015005) #17	CDCA7L (ENSSHAG00000014132) #15	SP8 (ENSSHAG00000023840) #19	ITGB8 (ENSSHAG00000000868) #21	MACC1 (ENSSHAG00000006812) #22	ENSSHAG00000031277	POLR1F (ENSSHAG00000024738) #25	FERD3L (ENSSHAG00000024736) #26	TWIST1 (ENSSHAG00000022750) #27	HDAC9 (ENSSHAG00000022066) #28	SNX13 (ENSSHAG00000005996) #30	ENSSHAG00000021588 #32	AGR3 (ENSSHAG00000000417) ##34	AGR2 (ENSSHAG00000002137) #34	TSPAN13 (ENSSHAG00000031045) #33	BZW2 (ENSSHAG00000004361) #35	ANKMY2 (ENSSHAG00000005439) #36	ENSSHAG00000005836	SOSTDC1 (ENSSHAG00000028251)	CRPPA (ENSSHAG00000026457)
Opossum	MODERN SPECIES	7	ENSMODG00000001030	GPNMB (ENSMODG00000001046)	NUP42 (ENSMODG00000025473)	KLHL7 (ENSMODG00000001075)	HYCC1 (ENSMODG00000001096) #8	ENSMODG00000001253 #9	ENSMODG00000023928	ENSMODG00000001265 #11	ENSMODG00000001277 #14	CDCA7L (ENSMODG00000001287) #15	DNAH11 (ENSMODG00000001356) #17	SP4 (ENSMODG00000001368) #18	ENSMODG00000046311	SP8 (ENSMODG00000001375) #19	ITGB8 (ENSMODG00000001388) #21	MACC1 (ENSMODG00000001394) #22	TMEM196 (ENSMODG00000001396) #24	ENSMODG00000001402 #25	FERD3L (ENSMODG00000001405) #26	TWIST1 (ENSMODG00000023924) #27	HDAC9 (ENSMODG00000001442) #28	SNX13 (ENSMODG00000001464) #30	ENSMODG00000001503	AHR (ENSMODG00000001528) #32	AGR3 (ENSMODG00000043280) ##34	ENSMODG00000001544 #34	ENSMODG00000001551 #33	BZW2 (ENSMODG00000001582) #35	ANKMY2 (ENSMODG00000001600) #36	ENSMODG00000027605	SOSTDC1 (ENSMODG00000001607)
Platypus	MODERN SPECIES	19	TRA2A (ENSOANG00000014202)	IGF2BP3 (ENSOANG00000014203)	MALSU1 (ENSOANG00000037543)	GPNMB (ENSOANG00000014205)	NUP42 (ENSOANG00000014206)	KLHL7 (ENSOANG00000014207)	HYCC1 (ENSOANG00000014208) #8	TOMM7 (ENSOANG00000014210) #10	ENSOANG00000022300 #11	RAPGEF5 (ENSOANG00000011808) #14	CDCA7L (ENSOANG00000011809) #15	DNAH11 (ENSOANG00000011810) #17	SP4 (ENSOANG00000045448) #18	SP8 (ENSOANG00000044983) #19	ITGB8 (ENSOANG00000031649) #21	MACC1 (ENSOANG00000009618) #22	ENSOANG00000048362	POLR1F (ENSOANG00000009616) #25	FERD3L (ENSOANG00000009615) #26	TWIST1 (ENSOANG00000009614) #27	ENSOANG00000009613 #28	SNX13 (ENSOANG00000009612) #30	AHR (ENSOANG00000009611) #32	AGR2 (ENSOANG00000013496) #34	TSPAN13 (ENSOANG00000013497) #33	BZW2 (ENSOANG00000020501) #35	ANKMY2 (ENSOANG00000012340) #36	ENSOANG00000028622	SOSTDC1 (ENSOANG00000007457)	CRPPA (ENSOANG00000050636)	MEOX2 (ENSOANG00000050568)
Sauria	ANCESTRAL SPECIES	15	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Archelosauria	ANCESTRAL SPECIES	6	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Archosauria	ANCESTRAL SPECIES		ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Aves	ANCESTRAL SPECIES	5	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Neognathae	ANCESTRAL SPECIES		ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Neognathae_b	ANCESTRAL SPECIES	9	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Neognathae_c	ANCESTRAL SPECIES	12	ENSGT01030000235027	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Kakapo	MODERN SPECIES		TRA2A (ENSSHBG00005006071)	IGF2BP3 (ENSSHBG00005006060)	MALSU1 (ENSSHBG00005006036)	GPNMB (ENSSHBG00005006015)	NUP42 (ENSSHBG00005005997)	KLHL7 (ENSSHBG00005005988)	HYCC1 (ENSSHBG00005005975) #8	TOMM7 (ENSSHBG00005005949) #10	IL6 (ENSSHBG00005005927) #11	RAPGEF5 (ENSSHBG00005005638) #14	CDCA7L (ENSSHBG00005005553) #15	SP4 (ENSSHBG00005005518) #18	SP8 (ENSSHBG00005005491) #19	ENSSHBG00005004496	ITGB8 (ENSSHBG00005003476) #21	MACC1 (ENSSHBG00005003317) #22	TMEM196 (ENSSHBG00005003293) #24	POLR1F (ENSSHBG00005003281) #25	FERD3L (ENSSHBG00005003272) #26	TWIST1 (ENSSHBG00005003266) #27	ENSSHBG00005003257 #28	SNX13 (ENSSHBG00005002909) #30	AHR (ENSSHBG00005002815) #32	AGR2 (ENSSHBG00005002734) #34	AGR3 (ENSSHBG00005002767) ##34	TSPAN13 (ENSSHBG00005002714) #33	BZW2 (ENSSHBG00005002692) #35	ANKMY2 (ENSSHBG00005002661) #36	SOSTDC1 (ENSSHBG00005002650)	CRPPA (ENSSHBG00005002643)	MEOX2 (ENSSHBG00005002628)
Golden eagle	MODERN SPECIES	19	TRA2A (ENSACCG00020008788)	ENSACCG00020008808	IGF2BP3 (ENSACCG00020008839)	GPNMB (ENSACCG00020008876)	NUP42 (ENSACCG00020008899)	KLHL7 (ENSACCG00020008923)	HYCC1 (ENSACCG00020008963) #8	TOMM7 (ENSACCG00020008997) #10	IL6 (ENSACCG00020009008) #11	RAPGEF5 (ENSACCG00020009095) #14	CDCA7L (ENSACCG00020009154) #15	SP4 (ENSACCG00020009172) #18	SP8 (ENSACCG00020009193) #19	ENSACCG00020009247	ITGB8 (ENSACCG00020009279) #21	MACC1 (ENSACCG00020009314) #22	TMEM196 (ENSACCG00020009335) #24	POLR1F (ENSACCG00020009344) #25	FERD3L (ENSACCG00020009353) #26	TWIST1 (ENSACCG00020009360) #27	ENSACCG00020009371 #28	ENSACCG00020009408 #28	SNX13 (ENSACCG00020009466) #30	AHR (ENSACCG00020009532) #32	AGR3 (ENSACCG00020009548) ##34	AGR2 (ENSACCG00020009559) #34	TSPAN13 (ENSACCG00020009580) #33	BZW2 (ENSACCG00020009594) #35	ANKMY2 (ENSACCG00020009615) #36	ENSACCG00020009649	SOSTDC1 (ENSACCG00020009676)
Passeriformes	ANCESTRAL SPECIES		ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000155287	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307.q.a #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Great tit	MODERN SPECIES	11	ENSPMJG00000000878	TRA2A (ENSPMJG00000000864)	IGF2BP3 (ENSPMJG00000000724)	MALSU1 (ENSPMJG00000000709)	GPNMB (ENSPMJG00000000706)	ENSPMJG00000000696	KLHL7 (ENSPMJG00000000681)	HYCC1 (ENSPMJG00000000633) #8	TOMM7 (ENSPMJG00000000595) #10	IL6 (ENSPMJG00000000569) #11	RAPGEF5 (ENSPMJG00000000453) #14	CDCA7L (ENSPMJG00000000396) #15	SP4 (ENSPMJG00000000293) #18	ENSPMJG00000000174	ITGB8 (ENSPMJG00000000149) #21	MACC1 (ENSPMJG00000000121) #22	TMEM196 (ENSPMJG00000000110) #24	POLR1F (ENSPMJG00000000090) #25	FERD3L (ENSPMJG00000000080) #26	TWIST1 (ENSPMJG00000011228) #27	HDAC9 (ENSPMJG00000011218) #28	SNX13 (ENSPMJG00000011205) #30	AHR (ENSPMJG00000011049) #32	AGR3 (ENSPMJG00000011045) ##34	AGR2 (ENSPMJG00000011035) #34	TSPAN13 (ENSPMJG00000011032) #33	BZW2 (ENSPMJG00000011023) #35	ANKMY2 (ENSPMJG00000011018) #36	ENSPMJG00000011015	SOSTDC1 (ENSPMJG00000011014)	CRPPA (ENSPMJG00000011012)
Passeriformes_d	ANCESTRAL SPECIES		ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307.r #28	ENSGT00940000160307.q.a #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Passeriformes_g	ANCESTRAL SPECIES	6	ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307.r #28	ENSGT00940000160307.q.a #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Passeroidea	ANCESTRAL SPECIES	6	ENSGT01030000235027	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307.q.a #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412	ENSGT00940000154018.b
Common canary	MODERN SPECIES	5	ENSSCAG00000014927	TRA2A (ENSSCAG00000014922)	IGF2BP3 (ENSSCAG00000014858)	MALSU1 (ENSSCAG00000014831)	GPNMB (ENSSCAG00000014821)	ENSSCAG00000014813	KLHL7 (ENSSCAG00000014800)	HYCC1 (ENSSCAG00000014781) #8	TOMM7 (ENSSCAG00000014766) #10	IL6 (ENSSCAG00000014761) #11	RAPGEF5 (ENSSCAG00000014692) #14	CDCA7L (ENSSCAG00000014674) #15	SP4 (ENSSCAG00000014662) #18	ENSSCAG00000013986	ITGB8 (ENSSCAG00000013803) #21	MACC1 (ENSSCAG00000013796) #22	TMEM196 (ENSSCAG00000013793) #24	POLR1F (ENSSCAG00000013787) #25	FERD3L (ENSSCAG00000013784) #26	ENSSCAG00000013779 #28	ENSSCAG00000013753 #28	SNX13 (ENSSCAG00000013738) #30	AHR (ENSSCAG00000013729) #32	AGR3 (ENSSCAG00000013713) ##34	AGR2 (ENSSCAG00000013706) #34	TSPAN13 (ENSSCAG00000013701) #33	BZW2 (ENSSCAG00000013699) #35	ANKMY2 (ENSSCAG00000013696) #36	ENSSCAG00000013686	SOSTDC1 (ENSSCAG00000013682)	CRPPA (ENSSCAG00000013677)
Zebra finch	MODERN SPECIES	12	TRA2A (ENSTGUG00000002795)	IGF2BP3 (ENSTGUG00000002773)	MALSU1 (ENSTGUG00000002770)	GPNMB (ENSTGUG00000002763)	NUP42 (ENSTGUG00000002757)	ENSTGUG00000023098	KLHL7 (ENSTGUG00000002740)	HYCC1 (ENSTGUG00000002729) #8	ENSTGUG00000028291 #10	IL6 (ENSTGUG00000002725) #11	RAPGEF5 (ENSTGUG00000002700) #14	CDCA7L (ENSTGUG00000002689) #15	SP8 (ENSTGUG00000023526) #19	ENSTGUG00000002657	ITGB8 (ENSTGUG00000002650) #21	MACC1 (ENSTGUG00000002649) #22	TMEM196 (ENSTGUG00000002647) #24	POLR1F (ENSTGUG00000002645) #25	FERD3L (ENSTGUG00000002644) #26	TWIST1 (ENSTGUG00000002643) #27	ENSTGUG00000002613 #28	ENSTGUG00000027596 #28	SNX13 (ENSTGUG00000002596) #30	AHR (ENSTGUG00000002585) #32	AGR3 (ENSTGUG00000002580) ##34	AGR2 (ENSTGUG00000002578) #34	TSPAN13 (ENSTGUG00000021415) #33	BZW2 (ENSTGUG00000002567) #35	ANKMY2 (ENSTGUG00000002557) #36	ENSTGUG00000002553	SOSTDC1 (ENSTGUG00000026528)
Medium ground finch	MODERN SPECIES	36	CCDC126 (ENSGFOG00000010360)	TRA2A (ENSGFOG00000010363)	IGF2BP3 (ENSGFOG00000010371)	MALSU1 (ENSGFOG00000010388)	GPNMB (ENSGFOG00000006901)	NUP42 (ENSGFOG00000006947)	KLHL7 (ENSGFOG00000006962)	HYCC1 (ENSGFOG00000007016) #8	ENSGFOG00000007033	IL6 (ENSGFOG00000007038) #11	RAPGEF5 (ENSGFOG00000007060) #14	CDCA7L (ENSGFOG00000007343) #15	SP4 (ENSGFOG00000007656) #18	ENSGFOG00000007681	ITGB8 (ENSGFOG00000007817) #21	MACC1 (ENSGFOG00000007835) #22	TMEM196 (ENSGFOG00000007851) #24
Flycatcher	MODERN SPECIES	11	ENSFALG00000028399	TRA2A (ENSFALG00000009605)	IGF2BP3 (ENSFALG00000009615)	MALSU1 (ENSFALG00000027606)	GPNMB (ENSFALG00000009646)	NUP42 (ENSFALG00000009653)	KLHL7 (ENSFALG00000009689)	FAM126A (ENSFALG00000026843) #8	ENSFALG00000024168	IL6 (ENSFALG00000025945) #11	RAPGEF5 (ENSFALG00000009738) #14	CDCA7L (ENSFALG00000009744) #15	SP4 (ENSFALG00000009748) #18	ENSFALG00000009749	ITGB8 (ENSFALG00000009752) #21	MACC1 (ENSFALG00000009756) #22	TMEM196 (ENSFALG00000009758) #24	POLR1F (ENSFALG00000009761) #25	FERD3L (ENSFALG00000014487) #26	TWIST1 (ENSFALG00000009781) #27	ENSFALG00000009805 #28	ENSFALG00000027289 #28	SNX13 (ENSFALG00000009859) #30	AHR (ENSFALG00000009904) #32	AGR3 (ENSFALG00000009910) ##34	AGR2 (ENSFALG00000023140) #34	TSPAN13 (ENSFALG00000009925) #33	BZW2 (ENSFALG00000009931) #35	ANKMY2 (ENSFALG00000026739) #36	ENSFALG00000009961	SOSTDC1 (ENSFALG00000009968)
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118.f	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a
Chicken	MODERN SPECIES	11	MALSU1 (ENSGALG00010001460)	GPNMB (ENSGALG00010001409)	ENSGALG00010001404	NUP42 (ENSGALG00010001402)	KLHL7 (ENSGALG00010001397)	FAM126A (ENSGALG00010002046) #8	TOMM7 (ENSGALG00010001991) #10	IL6 (ENSGALG00010001941) #11	RAPGEF5 (ENSGALG00010001923) #14	CDCA7L (ENSGALG00010001440) #15	ENSGALG00010001436	SP4 (ENSGALG00010003824) #18	SP8 (ENSGALG00010003079) #19	ABCB5 (ENSGALG00010003061)	ITGB8 (ENSGALG00010003791) #21	MACC1 (ENSGALG00010003698) #22	TMEM196 (ENSGALG00010002701) #24	TWISTNB (ENSGALG00010003087) #25	FERD3L (ENSGALG00010005018) #26	TWIST1 (ENSGALG00010003808) #27	HDAC9 (ENSGALG00010003764) #28	SNX13 (ENSGALG00010003595) #30	AHR1A (ENSGALG00010004433) #32	AGR3 (ENSGALG00010004391) ##34	AGR2 (ENSGALG00010004377) #34	TSPAN13 (ENSGALG00010004367) #33	BZW2 (ENSGALG00010005255) #35	ANKMY2 (ENSGALG00010004355) #36	ENSGALG00010004336	SOSTDC1 (ENSGALG00010004344)	CRPPA (ENSGALG00010004302)
Turkey	MODERN SPECIES	26	TRA2A (ENSMGAG00000010514)	IGF2BP3 (ENSMGAG00000010497)	MALSU1 (ENSMGAG00000010496)	GPNMB (ENSMGAG00000010478)	ENSMGAG00000012197	KLHL7 (ENSMGAG00000010450)	HYCC1 (ENSMGAG00000010430) #8	ENSMGAG00000021520	IL6 (ENSMGAG00000016678) #11	ENSMGAG00000022071 #14	RAPGEF5 (ENSMGAG00000010394) #14	CDCA7L (ENSMGAG00000010378) #15	SP4 (ENSMGAG00000010367) #18	ENSMGAG00000010305	ITGB8 (ENSMGAG00000011297) #21	MACC1 (ENSMGAG00000011308) #22	ENSMGAG00000010300	POLR1F (ENSMGAG00000010296) #25	FERD3L (ENSMGAG00000015843) #26	HDAC9 (ENSMGAG00000010234) #28	SNX13 (ENSMGAG00000010193) #30	AHR (ENSMGAG00000010174) #32	AGR3 (ENSMGAG00000010167) ##34	AGR2 (ENSMGAG00000010157) #34	BZW2 (ENSMGAG00000010129) #35	ANKMY2 (ENSMGAG00000010117) #36	ENSMGAG00000010114	SOSTDC1 (ENSMGAG00000010106)	CRPPA (ENSMGAG00000010099)	AGMO (ENSMGAG00000010089)	DGKB (ENSMGAG00000010034)
Japanese quail	MODERN SPECIES	11	TRA2A (ENSCJPG00005012500)	IGF2BP3 (ENSCJPG00005012087)	MALSU1 (ENSCJPG00005012072)	GPNMB (ENSCJPG00005012071)	NUP42 (ENSCJPG00005012070)	KLHL7 (ENSCJPG00005012069)	HYCC1 (ENSCJPG00005012067) #8	TOMM7 (ENSCJPG00005012064) #10	ENSCJPG00005012063 #11	RAPGEF5 (ENSCJPG00005012022) #14	CDCA7L (ENSCJPG00005012021) #15	SP4 (ENSCJPG00005012018) #18	SP8 (ENSCJPG00005012005) #19	ENSCJPG00005012000	ITGB8 (ENSCJPG00005011999) #21	MACC1 (ENSCJPG00005011998) #22	ENSCJPG00005011986	POLR1F (ENSCJPG00005011963) #25	FERD3L (ENSCJPG00005011927) #26	TWIST1 (ENSCJPG00005011925) #27	HDAC9 (ENSCJPG00005011923) #28	SNX13 (ENSCJPG00005011883) #30	AHR (ENSCJPG00005011879) #32	AGR3 (ENSCJPG00005011876) ##34	TSPAN13 (ENSCJPG00005011875) #33	AGR2 (ENSCJPG00005011874) #34	BZW2 (ENSCJPG00005011870) #35	ANKMY2 (ENSCJPG00005011860) #36	ENSCJPG00005011857	SOSTDC1 (ENSCJPG00005011854)	CRPPA (ENSCJPG00005011853)
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000157167	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000163428.b.a	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412
Pink-footed goose	MODERN SPECIES		IGF2BP3 (ENSABRG00000010526)	MALSU1 (ENSABRG00000010548)	GPNMB (ENSABRG00000010565)	NUP42 (ENSABRG00000010578)	KLHL7 (ENSABRG00000010586)	HYCC1 (ENSABRG00000010607) #8	TOMM7 (ENSABRG00000010642) #10	IL6 (ENSABRG00000010652) #11	ENSABRG00000010657 #14	RAPGEF5 (ENSABRG00000010669) #14	CDCA7L (ENSABRG00000010706) #15	SP4 (ENSABRG00000010746) #18	SP8 (ENSABRG00000010759) #19	ENSABRG00000010773	ITGB8 (ENSABRG00000010793) #21	MACC1 (ENSABRG00000010829) #22	TMEM196 (ENSABRG00000010845) #24	POLR1F (ENSABRG00000010855) #25	FERD3L (ENSABRG00000010860) #26	ENSABRG00000010863	HDAC9 (ENSABRG00000010874) #28	SNX13 (ENSABRG00000010973) #30	AHR (ENSABRG00000010992) #32	AGR3 (ENSABRG00000011007) ##34	AGR2 (ENSABRG00000011025) #34	TSPAN13 (ENSABRG00000011056) #33	BZW2 (ENSABRG00000011066) #35	ANKMY2 (ENSABRG00000011077) #36	ENSABRG00000011091	SOSTDC1 (ENSABRG00000011094)	CRPPA (ENSABRG00000011103)
African ostrich	MODERN SPECIES	815														ENSSCUG00000010543	ITGB8 (ENSSCUG00000010554) #21	MACC1 (ENSSCUG00000010555) #22	TMEM196 (ENSSCUG00000010557) #24	FERD3L (ENSSCUG00000010559) #26	HDAC9 (ENSSCUG00000010574) #28	SNX13 (ENSSCUG00000010594) #30	AHR (ENSSCUG00000010601) #32	AGR3 (ENSSCUG00000010605) ##34	AGR2 (ENSSCUG00000010609) #34	TSPAN13 (ENSSCUG00000010610) #33	BZW2 (ENSSCUG00000010613) #35	ANKMY2 (ENSSCUG00000010618) #36	ENSSCUG00000010621	SOSTDC1 (ENSSCUG00000010623)	ENSSCUG00000010624	CRPPA (ENSSCUG00000010629)	MEOX2 (ENSSCUG00000010637)
Australian saltwater crocodile	MODERN SPECIES		MALSU1 (ENSCPRG00005015969)	GPNMB (ENSCPRG00005015967)	NUP42 (ENSCPRG00005015964)	IGF2BP3 (ENSCPRG00005015954)	KLHL7 (ENSCPRG00005015951)	HYCC1 (ENSCPRG00005015946) #8	TOMM7 (ENSCPRG00005015944) #10	IL6 (ENSCPRG00005015943) #11	RAPGEF5 (ENSCPRG00005015927) #14	CDCA7L (ENSCPRG00005015926) #15	DNAH11 (ENSCPRG00005015597) #17	SP4 (ENSCPRG00005015532) #18	ABCB5 (ENSCPRG00005015506) #20	ENSCPRG00005015412	ITGB8 (ENSCPRG00005015376) #21	MACC1 (ENSCPRG00005015373) #22	ENSCPRG00005015353	POLR1F (ENSCPRG00005015351) #25	FERD3L (ENSCPRG00005015338) #26	TWIST1 (ENSCPRG00005015335) #27	ENSCPRG00005015331 #28	ENSCPRG00005015321 #28	SNX13 (ENSCPRG00005015318) #30	AHR (ENSCPRG00005015276) #32	AGR3 (ENSCPRG00005015251) ##34	AGR2 (ENSCPRG00005015225) #34	TSPAN13 (ENSCPRG00005015218) #33	BZW2 (ENSCPRG00005015204) #35	ANKMY2 (ENSCPRG00005015197) #36	ENSCPRG00005015193	ENSCPRG00005015189
Cryptodira	ANCESTRAL SPECIES	4	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155287	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Testudinoidea	ANCESTRAL SPECIES	8	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155287	ENSGT00940000166052.a.a.b	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Emydidae	ANCESTRAL SPECIES	34	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000155287	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a
painted turtle	MODERN SPECIES	767															ITGB8 (ENSCPBG00000000238) #21	MACC1 (ENSCPBG00000000275) #22	TMEM196 (ENSCPBG00000000325) #24	POLR1F (ENSCPBG00000000367) #25	FERD3L (ENSCPBG00000000383) #26	HDAC9 (ENSCPBG00000000454) #28	TAFA2 (ENSCPBG00000000525)	USP15 (ENSCPBG00000000584)	MON2 (ENSCPBG00000000681)	PPM1H (ENSCPBG00000000753)	AVPR1A (ENSCPBG00000000790)	RXYLT1 (ENSCPBG00000000837)	SRGAP1 (ENSCPBG00000000874)	KICS2 (ENSCPBG00000000939)	ENSCPBG00000000963	RPL18A (ENSCPBG00000000983)	XPOT (ENSCPBG00000001003)
Three-toed box turtle	MODERN SPECIES	30	NUP42 (ENSTMTG00000000062)	KLHL7 (ENSTMTG00000000092)	HYCC1 (ENSTMTG00000000129) #8	ENSTMTG00000000184 #9	IL6 (ENSTMTG00000000298) #11	ENSTMTG00000000340 #14	RAPGEF5 (ENSTMTG00000000391) #14	CDCA7L (ENSTMTG00000000428) #15	ENSTMTG00000000457	DNAH11 (ENSTMTG00000001073) #17	SP4 (ENSTMTG00000002767) #18	SP8 (ENSTMTG00000002773) #19	ABCB5 (ENSTMTG00000002813) #20	ENSTMTG00000003044	ITGB8 (ENSTMTG00000003419) #21	MACC1 (ENSTMTG00000003541) #22	ENSTMTG00000003612	ENSTMTG00000003626	POLR1F (ENSTMTG00000003642) #25	FERD3L (ENSTMTG00000003656) #26	HDAC9 (ENSTMTG00000003728) #28	SNX13 (ENSTMTG00000004244) #30	AHR (ENSTMTG00000004344) #32	AGR3 (ENSTMTG00000004366) ##34	AGR2 (ENSTMTG00000004394) #34	TSPAN13 (ENSTMTG00000004427) #33	BZW2 (ENSTMTG00000004461) #35	ANKMY2 (ENSTMTG00000004634) #36	ENSTMTG00000004665	SOSTDC1 (ENSTMTG00000004694)	CRPPA (ENSTMTG00000004712)
Testudinidae	ANCESTRAL SPECIES	1	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00940000164650 #9	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000161340 #20	ENSGT00940000166052.a.a.b	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a.r #35	ENSGT00390000012561.a.q #35	ENSGT00390000016820 #36	ENSGT00390000014900.b.b.a
Abingdon island giant tortoise	MODERN SPECIES	212												ENSCABG00000000615	ENSCABG00000000463	ENSCABG00000000316	ITGB8 (ENSCABG00000000271) #21	MACC1 (ENSCABG00000000257) #22
Goode s thornscrub tortoise	MODERN SPECIES	11	NUP42 (ENSGEVG00005018404)	KLHL7 (ENSGEVG00005018379)	HYCC1 (ENSGEVG00005018341) #8	ENSGEVG00005018258 #9	TOMM7 (ENSGEVG00005018229) #10	IL6 (ENSGEVG00005018173) #11	RAPGEF5 (ENSGEVG00005018050) #14	CDCA7L (ENSGEVG00005017998) #15	DNAH11 (ENSGEVG00005015389) #17	SP4 (ENSGEVG00005014942) #18	SP8 (ENSGEVG00005014907) #19	ABCB5 (ENSGEVG00005014091) #20	ENSGEVG00005013240	ENSGEVG00005013142	ITGB8 (ENSGEVG00005012960) #21	MACC1 (ENSGEVG00005012771) #22	ENSGEVG00005012739	ENSGEVG00005012707	POLR1F (ENSGEVG00005012571) #25	FERD3L (ENSGEVG00005012548) #26	TWIST1 (ENSGEVG00005012530) #27	HDAC9 (ENSGEVG00005012001) #28	SNX13 (ENSGEVG00005011797) #30	AHR (ENSGEVG00005011706) #32	AGR3 (ENSGEVG00005011646) ##34	AGR2 (ENSGEVG00005011579) #34	TSPAN13 (ENSGEVG00005011518) #33	ENSGEVG00005011416 #35	ENSGEVG00005011387 #35	ANKMY2 (ENSGEVG00005011366) #36	SOSTDC1 (ENSGEVG00005011342)
Chinese turtle	MODERN SPECIES	2225	NUP42 (ENSPSIG00000013521)	KLHL7 (ENSPSIG00000012005)	HYCC1 (ENSPSIG00000011903) #8	ENSPSIG00000010849 #9	ENSPSIG00000010835	IL6 (ENSPSIG00000009973) #11	RAPGEF5 (ENSPSIG00000008835) #14	CDCA7L (ENSPSIG00000007953) #15	ENSPSIG00000009884 #17	ENSPSIG00000009872 #17	SP4 (ENSPSIG00000009131) #18	ABCB5 (ENSPSIG00000005929) #20	ENSPSIG00000005884	ENSPSIG00000000705	ITGB8 (ENSPSIG00000004844) #21	MACC1 (ENSPSIG00000004544) #22	TMEM196 (ENSPSIG00000004454) #24	POLR1F (ENSPSIG00000004395) #25	FERD3L (ENSPSIG00000000691) #26	HDAC9 (ENSPSIG00000011707) #28	SNX13 (ENSPSIG00000010516) #30	AHR (ENSPSIG00000010051) #32	AGR3 (ENSPSIG00000009745) ##34	AGR2 (ENSPSIG00000009717) #34	TSPAN13 (ENSPSIG00000009127) #33	BZW2 (ENSPSIG00000008748) #35	ANKMY2 (ENSPSIG00000008255) #36	ENSPSIG00000008230	SOSTDC1 (ENSPSIG00000008202)	CRPPA (ENSPSIG00000007955)	MEOX2 (ENSPSIG00000007948)
Lepidosauria	ANCESTRAL SPECIES	5	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Episquamata	ANCESTRAL SPECIES	5	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642
Toxicofera	ANCESTRAL SPECIES	4	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT01030000237867
Elapidae	ANCESTRAL SPECIES	5	ENSGT00940000157167.y	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000158880 #17	ENSGT00940000157827.e #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a.e #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT01030000237867	ENSGT00390000014900.b.b.a
Elapidae_a	ANCESTRAL SPECIES	19	ENSGT00940000157167.y	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000158880 #17	ENSGT00940000157827.e #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a.e #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT01030000237867	ENSGT00390000014900.b.b.a
Acanthophiinae	ANCESTRAL SPECIES	19	ENSGT00940000157167.y	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000158880 #17	ENSGT00940000157827.e.a #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000176107	ENSGT00940000163281	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307 #28	ENSGT00950000182856.a.a.a.e #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00940000157010 #33	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT01030000237867	ENSGT00390000014900.b.b.a
Mainland tiger snake	MODERN SPECIES	96	GPNMB (ENSNSUG00000015189)	NUP42 (ENSNSUG00000015190)	KLHL7 (ENSNSUG00000015191)	HYCC1 (ENSNSUG00000015192) #8	TOMM7 (ENSNSUG00000015194) #10	IL6 (ENSNSUG00000015195) #11	ENSNSUG00000015196 #14	RAPGEF5 (ENSNSUG00000015197) #14	DNAH11 (ENSNSUG00000015198) #17	ENSNSUG00000015298 #18	ENSNSUG00000015299 #18	SP8 (ENSNSUG00000015300) #19	ENSNSUG00000015301	ITGB8 (ENSNSUG00000015304) #21	ENSNSUG00000015307	MACC1 (ENSNSUG00000015308) #22	ENSNSUG00000015309	POLR1F (ENSNSUG00000015310) #25	TWIST1 (ENSNSUG00000015311) #27	ENSNSUG00000015312 #28	ENSNSUG00000015314 #28	ENSNSUG00000015317	SNX13 (ENSNSUG00000015318) #30	AHR (ENSNSUG00000015321) #32	AGR3 (ENSNSUG00000015322) ##34	AGR2 (ENSNSUG00000015323) #34	TSPAN13 (ENSNSUG00000015326) #33	BZW2 (ENSNSUG00000015329) #35	ANKMY2 (ENSNSUG00000015330) #36	ENSNSUG00000015333	SOSTDC1 (ENSNSUG00000015335)
Eastern brown snake	MODERN SPECIES	31	GPNMB (ENSPTXG00000013975)	NUP42 (ENSPTXG00000013972)	KLHL7 (ENSPTXG00000013969)	HYCC1 (ENSPTXG00000013968) #8	TOMM7 (ENSPTXG00000013967) #10	ENSPTXG00000013965 #11	ENSPTXG00000013964 #14	RAPGEF5 (ENSPTXG00000013963) #14	DNAH11 (ENSPTXG00000013806) #17	ENSPTXG00000013777 #18	SP8 (ENSPTXG00000013775) #19	ENSPTXG00000013773	ENSPTXG00000013771	ENSPTXG00000013769	ITGB8 (ENSPTXG00000013766) #21	MACC1 (ENSPTXG00000013764) #22	ENSPTXG00000013763	ENSPTXG00000013762	POLR1F (ENSPTXG00000013761) #25	FERD3L (ENSPTXG00000013759) #26	TWIST1 (ENSPTXG00000013757) #27	ENSPTXG00000013755 #28	ENSPTXG00000013748 #28	SNX13 (ENSPTXG00000013739) #30	AHR (ENSPTXG00000013738) #32	AGR3 (ENSPTXG00000013736) ##34	AGR2 (ENSPTXG00000013735) #34	TSPAN13 (ENSPTXG00000013733) #33	BZW2 (ENSPTXG00000013730) #35	ANKMY2 (ENSPTXG00000013728) #36	SOSTDC1 (ENSPTXG00000013727)
Blue-lipped sea krait	MODERN SPECIES	1640																MACC1 (ENSLLTG00000002390) #22
Indian cobra	MODERN SPECIES	337	ENSNNAG00000013824	IGF2BP3 (ENSNNAG00000013753)	MALSU1 (ENSNNAG00000013741)	GPNMB (ENSNNAG00000013648)	NUP42 (ENSNNAG00000013600)	KLHL7 (ENSNNAG00000013544)	HYCC1 (ENSNNAG00000013425) #8	TOMM7 (ENSNNAG00000013408) #10	ENSNNAG00000013394	RAPGEF5 (ENSNNAG00000013329) #14	DNAH11 (ENSNNAG00000009701) #17	ENSNNAG00000009446 #18	SP8 (ENSNNAG00000009420) #19	ENSNNAG00000008577	ITGB8 (ENSNNAG00000008483) #21	MACC1 (ENSNNAG00000008401) #22	ENSNNAG00000008385	ENSNNAG00000008374	POLR1F (ENSNNAG00000008362) #25	FERD3L (ENSNNAG00000008342) #26	TWIST1 (ENSNNAG00000008335) #27	ENSNNAG00000008312	ENSNNAG00000008268 #28	ENSNNAG00000008127 #28	SNX13 (ENSNNAG00000007803) #30	AHR (ENSNNAG00000007694) #32	AGR3 (ENSNNAG00000017489) ##34	AGR2 (ENSNNAG00000017482) #34	TSPAN13 (ENSNNAG00000017475) #33	BZW2 (ENSNNAG00000017464) #35	SOSTDC1 (ENSNNAG00000017457)
Lizard	MODERN SPECIES	5	GPNMB (ENSACAG00000013625)	NUP42 (ENSACAG00000040314)	KLHL7 (ENSACAG00000013755)	HYCC1 (ENSACAG00000013949) #8	ENSACAG00000043261	TOMM7 (ENSACAG00000014032) #10	IL6 (ENSACAG00000029018) #11	RAPGEF5 (ENSACAG00000014038) #14	CDCA7L (ENSACAG00000014127) #15	DNAH11 (ENSACAG00000024709) #17	SP4 (ENSACAG00000014193) #18	ENSACAG00000041413	ENSACAG00000011331	ITGB8 (ENSACAG00000011506) #21	ENSACAG00000043443	MACC1 (ENSACAG00000011775) #22	TMEM196 (ENSACAG00000011804) #24	POLR1F (ENSACAG00000011817) #25	FERD3L (ENSACAG00000011821) #26	twist1 (ENSACAG00000011825) #27	ENSACAG00000025814 #28	ENSACAG00000012095 #28	SNX13 (ENSACAG00000012199) #30	AHR (ENSACAG00000023372) #32	AGR3 (ENSACAG00000012579) ##34	agr2 (ENSACAG00000012587) #34	TSPAN13 (ENSACAG00000012640) #33	BZW2 (ENSACAG00000012646) #35	ANKMY2 (ENSACAG00000012769) #36	ENSACAG00000012804	SOSTDC1 (ENSACAG00000037311)
Laterata	ANCESTRAL SPECIES	10	ENSGT00940000154957.B	ENSGT00390000015035	ENSGT00950000183188.B	ENSGT00390000000118	ENSGT00940000155602	ENSGT00390000011295.b #8	ENSGT00390000014833 #10	ENSGT00390000000878 #11	ENSGT00940000155137 #14	ENSGT00940000159108 #15	ENSGT00940000158880 #17	ENSGT00940000157827 #18	ENSGT00940000162033.a.a #19	ENSGT00940000166052	ENSGT01090000259987.b.a #21	ENSGT00390000013151.a.b #22	ENSGT00940000163002 #24	ENSGT00390000005553 #25	ENSGT00940000161409 #26	ENSGT00940000162831 #27	ENSGT00940000160307.cb #28	ENSGT00950000182856.a.a.a #30	ENSGT00940000154486.b.a.b #32	ENSGT00530000063273.b.a.b.a.a ##34	ENSGT00530000063273.b.a.b.a.b #34	ENSGT00390000012561.a #35	ENSGT00390000016820 #36	ENSGT00940000165642	ENSGT00390000014900.b.b.a	ENSGT00390000006412	ENSGT00940000154018.b
Common wall lizard	MODERN SPECIES	3	MALSU1 (ENSPMRG00000017403)	GPNMB (ENSPMRG00000017398)	NUP42 (ENSPMRG00000017384)	KLHL7 (ENSPMRG00000017351)	HYCC1 (ENSPMRG00000017338) #8	TOMM7 (ENSPMRG00000017328) #10	IL6 (ENSPMRG00000017322) #11	RAPGEF5 (ENSPMRG00000017301) #14	CDCA7L (ENSPMRG00000017287) #15	DNAH11 (ENSPMRG00000016097) #17	SP4 (ENSPMRG00000015846) #18	ENSPMRG00000015841	SP8 (ENSPMRG00000015834) #19	ENSPMRG00000015816	ITGB8 (ENSPMRG00000015810) #21	MACC1 (ENSPMRG00000015797) #22	TMEM196 (ENSPMRG00000015791) #24	POLR1F (ENSPMRG00000015787) #25	FERD3L (ENSPMRG00000015775) #26	TWIST1 (ENSPMRG00000015772) #27	HDAC9 (ENSPMRG00000015702) #28	SNX13 (ENSPMRG00000015679) #30	AHR (ENSPMRG00000015668) #32	AGR3 (ENSPMRG00000015660) ##34	AGR2 (ENSPMRG00000015651) #34	BZW2 (ENSPMRG00000015636) #35	ANKMY2 (ENSPMRG00000015630) #36	TSPAN13 (ENSPMRG00000015628) #33	SOSTDC1 (ENSPMRG00000015624)	CRPPA (ENSPMRG00000015617)	ENSPMRG00000015612
Argentine black and white tegu	MODERN SPECIES	5	ENSSMRG00000003455	MALSU1 (ENSSMRG00000003463)	GPNMB (ENSSMRG00000003470)	NUP42 (ENSSMRG00000003509)	KLHL7 (ENSSMRG00000003538)	HYCC1 (ENSSMRG00000003546) #8	TOMM7 (ENSSMRG00000003554) #10	ENSSMRG00000003556 #11	RAPGEF5 (ENSSMRG00000003576) #14	CDCA7L (ENSSMRG00000003590) #15	DNAH11 (ENSSMRG00000003615) #17	SP4 (ENSSMRG00000005181) #18	SP8 (ENSSMRG00000005210) #19	ENSSMRG00000005214	ITGB8 (ENSSMRG00000007645) #21	MACC1 (ENSSMRG00000007651) #22	TMEM196 (ENSSMRG00000007653) #24	POLR1F (ENSSMRG00000007656) #25	FERD3L (ENSSMRG00000007660) #26	TWIST1 (ENSSMRG00000007669) #27	ENSSMRG00000007698 #28	ENSSMRG00000007714 #28	SNX13 (ENSSMRG00000007718) #30	AHR (ENSSMRG00000007757) #32	AGR3 (ENSSMRG00000007837) ##34	AGR2 (ENSSMRG00000007838) #34	BZW2 (ENSSMRG00000007841) #35	ANKMY2 (ENSSMRG00000007843) #36	ENSSMRG00000007844	SOSTDC1 (ENSSMRG00000007929)	CRPPA (ENSSMRG00000007934)
tuatara	MODERN SPECIES	1878	IGF2BP3 (ENSSPUG00000006162)	MALSU1 (ENSSPUG00000006180)	GPNMB (ENSSPUG00000006192)	NUP42 (ENSSPUG00000006209)	KLHL7 (ENSSPUG00000006222)	HYCC1 (ENSSPUG00000006252) #8	TOMM7 (ENSSPUG00000006271) #10	ENSSPUG00000006284 #14	RAPGEF5 (ENSSPUG00000006313) #14	CDCA7L (ENSSPUG00000006361) #15	DNAH11 (ENSSPUG00000006480) #17	SP4 (ENSSPUG00000006899) #18	ABCB5 (ENSSPUG00000007032) #20	ENSSPUG00000007506	ITGB8 (ENSSPUG00000007535) #21	MACC1 (ENSSPUG00000007564) #22	ENSSPUG00000007578	ENSSPUG00000007583	POLR1F (ENSSPUG00000007595) #25	HDAC9 (ENSSPUG00000007631) #28	ENSSPUG00000007649	ENSSPUG00000007655 #30	ENSSPUG00000007676 #30