Mus	ANCESTRAL SPECIES	2	ENSGT00940000160724	ENSGT00940000159523 #7	ENSGT00940000161812 #9	ENSGT00390000003267 #10	ENSGT00390000015009 #11	ENSGT00940000159790 #12	ENSGT01090000260005.a.a.a.b.a.a.b #13	ENSGT00940000161778 #14	ENSGT00940000155685 #15	ENSGT00390000004038 #16	ENSGT00530000063991.a #17	ENSGT00940000159539 #18	ENSGT00940000161200 #19	ENSGT00940000162478 #20	ENSGT00550000075038 #21	ENSGT00390000017837.a #22	ENSGT00940000156993 #23	ENSGT00940000160739 #24	ENSGT00390000002808.a #25	ENSGT00390000002808.b #26	ENSGT00940000156292 #27	ENSGT00940000163904 #28	ENSGT00390000006879 #29	ENSGT00940000156497 #30	ENSGT00950000182860.a.a.a #31	ENSGT00940000155111 #32	ENSGT00530000063282.t.t.a ##33	ENSGT00530000063282.t.t.b #33	ENSGT00940000161690 #34	ENSGT00390000010523.c.a #35	ENSGT00950000183192.a.b #36
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000159523 #7	ENSGT00860000135945 #8	ENSGT00940000161812 #9	ENSGT00390000003267 #10	ENSGT00390000015009 #11	ENSGT00940000159790 #12	ENSGT01090000260005.a.a.a.b.a.a.b #13	ENSGT00940000161778 #14	ENSGT00940000155685 #15	ENSGT00390000004038 #16	ENSGT00530000063991.a #17	ENSGT00940000159539 #18	ENSGT00940000161200 #19	ENSGT00940000162478 #20	ENSGT00550000075038 #21	ENSGT00390000017837.a #22	ENSGT00940000156993 #23	ENSGT00940000160739 #24	ENSGT00390000002808.a #25	ENSGT00390000002808.b #26	ENSGT00940000156292 #27	ENSGT00940000163904 #28	ENSGT00390000006879 #29	ENSGT00940000156497 #30	ENSGT00950000182860.a.a.a #31	ENSGT00940000155111 #32	ENSGT00530000063282.t.t.a ##33	ENSGT00530000063282.t.t.b #33	ENSGT00940000161690 #34	ENSGT00390000010523.c.a #35	ENSGT00950000183192.a.b #36
Ryukyu mouse	MODERN SPECIES	2	Gpatch8 (MGP_CAROLIEiJ_G0017255) #7	MGP_CAROLIEiJ_G0017256 #8	Fzd2 (MGP_CAROLIEiJ_G0017257) #9	Meioc (MGP_CAROLIEiJ_G0017258) #10	Ccdc43 (MGP_CAROLIEiJ_G0017259) #11	Adam11 (MGP_CAROLIEiJ_G0017260) #12	Gjc1 (MGP_CAROLIEiJ_G0017261) #13	Higd1b (MGP_CAROLIEiJ_G0017262) #14	Eftud2 (MGP_CAROLIEiJ_G0017263) #15	Ccdc103 (MGP_CAROLIEiJ_G0017264) #16	Fam187a (MGP_CAROLIEiJ_G0017265) #17	Gfap (MGP_CAROLIEiJ_G0017266) #18	Kif18b (MGP_CAROLIEiJ_G0017267) #19	C1ql1 (MGP_CAROLIEiJ_G0017268) #20	Dcakd (MGP_CAROLIEiJ_G0017269) #21	Nmt1 (MGP_CAROLIEiJ_G0017270) #22	Plcd3 (MGP_CAROLIEiJ_G0017271) #23	MGP_CAROLIEiJ_G0017272 #24	Hexim1 (MGP_CAROLIEiJ_G0017273) #25	Hexim2 (MGP_CAROLIEiJ_G0017274) #26	Fmnl1 (MGP_CAROLIEiJ_G0017275) #27	Efcab15 (MGP_CAROLIEiJ_G0017276) #28	Spata32 (MGP_CAROLIEiJ_G0017277) #29	Map3k14 (MGP_CAROLIEiJ_G0017278) #30	Arhgap27 (MGP_CAROLIEiJ_G0017279) #31	Plekhm1 (MGP_CAROLIEiJ_G0017280) #32	MGP_CAROLIEiJ_G0017281 #33	Lyzl6 (MGP_CAROLIEiJ_G0017282) #34	Rprml (MGP_CAROLIEiJ_G0017283) #35	Gosr2 (MGP_CAROLIEiJ_G0017284) #36	Wnt9b (MGP_CAROLIEiJ_G0017285) #37
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000159523 #7	ENSGT00860000135945 #8	ENSGT00940000161812 #9	ENSGT00390000003267 #10	ENSGT00390000015009 #11	ENSGT00940000159790 #12	ENSGT01090000260005.a.a.a.b.a.a.b #13	ENSGT00940000161778 #14	ENSGT00940000155685 #15	ENSGT00390000004038 #16	ENSGT00530000063991.a #17	ENSGT00940000159539 #18	ENSGT00940000161200 #19	ENSGT00940000162478 #20	ENSGT00550000075038 #21	ENSGT00390000017837.a #22	ENSGT00940000156993 #23	ENSGT00940000160739 #24	ENSGT00390000002808.a #25	ENSGT00390000002808.b #26	ENSGT00940000156292 #27	ENSGT00940000163904 #28	ENSGT00390000006879 #29	ENSGT00940000156497 #30	ENSGT00950000182860.a.a.a #31	ENSGT00940000155111 #32	ENSGT00530000063282.t.t.a ##33	ENSGT00530000063282.t.t.b #33	ENSGT00940000161690 #34	ENSGT00390000010523.c.a #35	ENSGT00950000183192.a.b #36
Mouse	MODERN SPECIES	2	Itga2b (ENSMUSG00000034664)	Gpatch8 (ENSMUSG00000034621) #7	Fzd2 (ENSMUSG00000050288) #9	Meioc (ENSMUSG00000051455) #10	Ccdc43 (ENSMUSG00000020925) #11	Adam11 (ENSMUSG00000020926) #12	Gjc1 (ENSMUSG00000034520) #13	Higd1b (ENSMUSG00000020928) #14	Eftud2 (ENSMUSG00000020929) #15	Ccdc103 (ENSMUSG00000020930) #16	Fam187a (ENSMUSG00000075510) #17	Gfap (ENSMUSG00000020932) #18	Kif18b (ENSMUSG00000051378) #19	C1ql1 (ENSMUSG00000045532) #20	Dcakd (ENSMUSG00000020935) #21	Nmt1 (ENSMUSG00000020936) #22	Plcd3 (ENSMUSG00000020937) #23	Acbd4 (ENSMUSG00000056938) #24	Hexim1 (ENSMUSG00000048878) #25	Hexim2 (ENSMUSG00000043372) #26	Fmnl1 (ENSMUSG00000055805) #27	Efcab15 (ENSMUSG00000020940) #28	Spata32 (ENSMUSG00000044787) #29	Map3k14 (ENSMUSG00000020941) #30	Arhgap27 (ENSMUSG00000034255) #31	Plekhm1 (ENSMUSG00000034247) #32	Lrrc37a (ENSMUSG00000078632) ##33	Gm884 (ENSMUSG00000034239) #33	Lyzl6 (ENSMUSG00000020945) #34	Rprml (ENSMUSG00000046215) #35	Gosr2 (ENSMUSG00000020946) #36
Mus_C	ANCESTRAL SPECIES	21	ENSGT00940000159523 #7	ENSGT00860000135945 #8	ENSGT00940000161812 #9	ENSGT00390000003267 #10	ENSGT00390000015009 #11	ENSGT00940000159790 #12	ENSGT01090000260005.a.a.a.b.a.a.b #13	ENSGT00940000161778 #14	ENSGT00940000155685 #15	ENSGT00390000004038 #16	ENSGT00530000063991.a #17	ENSGT00940000159539 #18	ENSGT00940000161200 #19	ENSGT00940000162478 #20	ENSGT00550000075038 #21	ENSGT00390000017837.a #22	ENSGT00940000156993 #23	ENSGT00940000160739 #24	ENSGT00390000002808.a #25	ENSGT00390000002808.b #26	ENSGT00940000156292 #27	ENSGT00940000163904 #28	ENSGT00390000006879 #29	ENSGT00940000156497 #30	ENSGT00950000182860.a.a.a #31	ENSGT00940000155111 #32	ENSGT00530000063282.t.t.b #33	ENSGT00940000161690 #34	ENSGT00390000010523.c.a #35	ENSGT00950000183192.a.b #36	ENSGT00940000158599 #37
Steppe mouse	MODERN SPECIES	3424	Gpatch8 (ENSMSIG00000027905) #7	ENSMSIG00000027901 #8	Fzd2 (ENSMSIG00000027898) #9	Meioc (ENSMSIG00000027890) #10	Ccdc43 (ENSMSIG00000027887) #11	Adam11 (ENSMSIG00000027868) #12	Gjc1 (ENSMSIG00000027865) #13	Higd1b (ENSMSIG00000027857) #14	Eftud2 (ENSMSIG00000027830) #15	Ccdc103 (ENSMSIG00000027823) #16	Fam187a (ENSMSIG00000027821) #17	Gfap (ENSMSIG00000027794) #18	Kif18b (ENSMSIG00000027759) #19	C1ql1 (ENSMSIG00000027753) #20	Dcakd (ENSMSIG00000027739) #21	Nmt1 (ENSMSIG00000027729) #22	Plcd3 (ENSMSIG00000027724) #23	ENSMSIG00000027718 #24	Hexim1 (ENSMSIG00000027717) #25	Hexim2 (ENSMSIG00000027714) #26	Fmnl1 (ENSMSIG00000027647) #27	Efcab15 (ENSMSIG00000027599) #28	Map3k14 (ENSMSIG00000027576) #30	ENSMSIG00000027573	Arhgap27 (ENSMSIG00000027528) #31	Plekhm1 (ENSMSIG00000027518) #32	Gm884 (ENSMSIG00000027443) #33	Lyzl6 (ENSMSIG00000027426) #34	Rprml (ENSMSIG00000027425) #35	Gosr2 (ENSMSIG00000027403) #36	Wnt9b (ENSMSIG00000027395) #37
spretus	MODERN SPECIES	2	Gpatch8 (MGP_SPRETEiJ_G0018098) #7	MGP_SPRETEiJ_G0018099 #8	Fzd2 (MGP_SPRETEiJ_G0018100) #9	Meioc (MGP_SPRETEiJ_G0018101) #10	Ccdc43 (MGP_SPRETEiJ_G0018102) #11	Adam11 (MGP_SPRETEiJ_G0018103) #12	Gjc1 (MGP_SPRETEiJ_G0018104) #13	Higd1b (MGP_SPRETEiJ_G0018105) #14	Eftud2 (MGP_SPRETEiJ_G0018106) #15	Ccdc103 (MGP_SPRETEiJ_G0018107) #16	Fam187a (MGP_SPRETEiJ_G0018108) #17	Gfap (MGP_SPRETEiJ_G0018109) #18	Kif18b (MGP_SPRETEiJ_G0018110) #19	C1ql1 (MGP_SPRETEiJ_G0018111) #20	Dcakd (MGP_SPRETEiJ_G0018112) #21	Nmt1 (MGP_SPRETEiJ_G0018113) #22	Plcd3 (MGP_SPRETEiJ_G0018114) #23	Acbd4 (MGP_SPRETEiJ_G0018115) #24	Hexim1 (MGP_SPRETEiJ_G0018116) #25	Hexim2 (MGP_SPRETEiJ_G0018117) #26	Fmnl1 (MGP_SPRETEiJ_G0018118) #27	Efcab15 (MGP_SPRETEiJ_G0018119) #28	Spata32 (MGP_SPRETEiJ_G0018120) #29	Map3k14 (MGP_SPRETEiJ_G0018121) #30	Arhgap27 (MGP_SPRETEiJ_G0018122) #31	Plekhm1 (MGP_SPRETEiJ_G0018123) #32	MGP_SPRETEiJ_G0018124 #33	Lyzl6 (MGP_SPRETEiJ_G0018125) #34	Rprml (MGP_SPRETEiJ_G0018126) #35	Gosr2 (MGP_SPRETEiJ_G0018127) #36	Wnt9b (MGP_SPRETEiJ_G0018128) #37
Shrew mouse	MODERN SPECIES	5	Gpatch8 (MGP_PahariEiJ_G0018385) #7	MGP_PahariEiJ_G0018386	Fzd2 (MGP_PahariEiJ_G0018387) #9	Meioc (MGP_PahariEiJ_G0018388) #10	Ccdc43 (MGP_PahariEiJ_G0018389) #11	Adam11 (MGP_PahariEiJ_G0018390) #12	Gjc1 (MGP_PahariEiJ_G0018391) #13	Higd1b (MGP_PahariEiJ_G0018392) #14	Eftud2 (MGP_PahariEiJ_G0018393) #15	MGP_PahariEiJ_G0018394 #16	Fam187a (MGP_PahariEiJ_G0018395) #17	Gfap (MGP_PahariEiJ_G0018396) #18	Kif18b (MGP_PahariEiJ_G0018397) #19	C1ql1 (MGP_PahariEiJ_G0018398) #20	Dcakd (MGP_PahariEiJ_G0018399) #21	Nmt1 (MGP_PahariEiJ_G0018400) #22	Plcd3 (MGP_PahariEiJ_G0018401) #23	MGP_PahariEiJ_G0018402 #24	Hexim1 (MGP_PahariEiJ_G0018403) #25	Hexim2 (MGP_PahariEiJ_G0018404) #26	Fmnl1 (MGP_PahariEiJ_G0018405) #27	Efcab15 (MGP_PahariEiJ_G0018406) #28	Spata32 (MGP_PahariEiJ_G0018407) #29	Map3k14 (MGP_PahariEiJ_G0018408) #30	Arhgap27 (MGP_PahariEiJ_G0018409) #31	Plekhm1 (MGP_PahariEiJ_G0018410) #32	MGP_PahariEiJ_G0018411 #33	Lyzl6 (MGP_PahariEiJ_G0018412) #34	Rprml (MGP_PahariEiJ_G0018413) #35	Gosr2 (MGP_PahariEiJ_G0018414) #36	Wnt9b (MGP_PahariEiJ_G0018415) #37