Vertebrata	ANCESTRAL SPECIES	336															ENSGT00940000155133 #21	ENSGT00940000153692.A #22
Gnathostomata	ANCESTRAL SPECIES	57					ENSGT00940000153372.A.e.a.a	ENSGT00390000013620	ENSGT00940000157870	ENSGT00530000063548.A	ENSGT00390000010355	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00390000012574	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680 #24	ENSGT00940000158223 #26	ENSGT00390000015667	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000163761	ENSGT00940000162130	ENSGT00940000162168	ENSGT00940000157298
Euteleostomi	ANCESTRAL SPECIES	57	ENSGT00950000183003.a.a.a.a.a	ENSGT00940000157778	ENSGT00390000013339	ENSGT00390000007731	ENSGT00940000165114	ENSGT00940000153372.A.e.a.a	ENSGT00390000013620	ENSGT00940000157870	ENSGT00530000063548.A	ENSGT00390000010355	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00390000015667	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00940000155291	ENSGT00940000157548	ENSGT00940000159174	ENSGT00940000163761
Sarcopterygii	ANCESTRAL SPECIES	412											ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26
Tetrapoda	ANCESTRAL SPECIES	25										ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Amniota	ANCESTRAL SPECIES	2	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT01030000235152
Mammalia	ANCESTRAL SPECIES	1	ENSGT00940000156633	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00940000165877	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Theria	ANCESTRAL SPECIES	6	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Eutheria	ANCESTRAL SPECIES	2	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Primates	ANCESTRAL SPECIES	10	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00940000159025	ENSGT00390000002509.a	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b.f	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Lemuriformes	ANCESTRAL SPECIES	52	ENSGT00390000002509.a	ENSGT00390000002509.b	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b.f	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Mouse lemur	MODERN SPECIES	21															ENSMICG00000043784 #21	MAPK10 (ENSMICG00000014359) #22	ARHGAP24 (ENSMICG00000028999) #23	WDFY3 (ENSMICG00000004962) #24	ENSMICG00000047148 #25	ENSMICG00000000970 #26	NKX6-1 (ENSMICG00000042480) #27	ENSMICG00000005904 #28	ENSMICG00000047779 #29	TAFA4 (ENSMICG00000042440) #30	EOGT (ENSMICG00000047274) #31	TMF1 (ENSMICG00000035913) #32	ENSMICG00000003407 #33	ENSMICG00000042511 #34	ENSMICG00000046450 #35	FRMD4B (ENSMICG00000045910) #36	PROP1 (ENSMICG00000027568) #37
Lemuriformes_a	ANCESTRAL SPECIES	64	ENSGT00390000002509.a	ENSGT00390000002509.b	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b.f	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Coquerels sifaka	MODERN SPECIES	371	SPP1 (ENSPCOG00000006026)	MEPE (ENSPCOG00000028720)	IBSP (ENSPCOG00000018630)	DMP1 (ENSPCOG00000023727)	SPARCL1 (ENSPCOG00000023448)	NUDT9 (ENSPCOG00000028049)	HSD17B11 (ENSPCOG00000024521)	ENSPCOG00000003550	HSD17B13 (ENSPCOG00000016156)	KLHL8 (ENSPCOG00000018983)	AFF1 (ENSPCOG00000027339)	C4orf36 (ENSPCOG00000023888)	SLC10A6 (ENSPCOG00000026098)	PTPN13 (ENSPCOG00000023990) #21	ENSPCOG00000017982	MAPK10 (ENSPCOG00000023059) #22	ARHGAP24 (ENSPCOG00000000502) #23	WDFY3 (ENSPCOG00000022708) #24	CDS1 (ENSPCOG00000017585) #26	NKX6-1 (ENSPCOG00000026560) #27	GPAT3 (ENSPCOG00000015710)	ABRAXAS1 (ENSPCOG00000024017)	MRPS18C (ENSPCOG00000017634)	HELQ (ENSPCOG00000001114)	HPSE (ENSPCOG00000028547)	COQ2 (ENSPCOG00000016807)	ENSPCOG00000024594	COPS4 (ENSPCOG00000019543)	LIN54 (ENSPCOG00000016222)	THAP9 (ENSPCOG00000019315)	ENSPCOG00000025847
Greater bamboo lemur	MODERN SPECIES	64	ENSPSMG00000016478	MEPE (ENSPSMG00000016484)	ENSPSMG00000016488	IBSP (ENSPSMG00000016491)	DMP1 (ENSPSMG00000016501)	DSPP (ENSPSMG00000016539)	SPARCL1 (ENSPSMG00000016553)	NUDT9 (ENSPSMG00000016567)	HSD17B11 (ENSPSMG00000016611)	HSD17B13 (ENSPSMG00000016633)	KLHL8 (ENSPSMG00000016695)	AFF1 (ENSPSMG00000016833)	C4orf36 (ENSPSMG00000016893)	SLC10A6 (ENSPSMG00000016898)	PTPN13 (ENSPSMG00000017328) #21	MAPK10 (ENSPSMG00000017774) #22	ENSPSMG00000017824	ARHGAP24 (ENSPSMG00000017866) #23	ENSPSMG00000017913	WDFY3 (ENSPSMG00000018028) #24	CDS1 (ENSPSMG00000018082) #26	NKX6-1 (ENSPSMG00000018100) #27	GPAT3 (ENSPSMG00000018113)	ABRAXAS1 (ENSPSMG00000018130)	MRPS18C (ENSPSMG00000018158)	HELQ (ENSPSMG00000018202)	HPSE (ENSPSMG00000018251)	COQ2 (ENSPSMG00000018286)	ENSPSMG00000018300	PLAC8 (ENSPSMG00000018310)	COPS4 (ENSPSMG00000018382)
Bushbaby	MODERN SPECIES	154	SPP1 (ENSOGAG00000011188)	MEPE (ENSOGAG00000011187)	IBSP (ENSOGAG00000011181)	DMP1 (ENSOGAG00000032756)	DSPP (ENSOGAG00000030776)	SPARCL1 (ENSOGAG00000009645)	NUDT9 (ENSOGAG00000009642)	HSD17B11 (ENSOGAG00000009636)	HSD17B13 (ENSOGAG00000009634)	KLHL8 (ENSOGAG00000009630)	ENSOGAG00000031299	ENSOGAG00000009622	SLC10A6 (ENSOGAG00000004425)	ENSOGAG00000030382 #21	ENSOGAG00000027610	MAPK10 (ENSOGAG00000014897) #22	ARHGAP24 (ENSOGAG00000014895) #23	ENSOGAG00000015396 #24	CDS1 (ENSOGAG00000032846) #26	NKX6-1 (ENSOGAG00000000028) #27	GPAT3 (ENSOGAG00000003516)	ABRAXAS1 (ENSOGAG00000014197)	HELQ (ENSOGAG00000014188)	HPSE (ENSOGAG00000017234)	COQ2 (ENSOGAG00000002235)	ENSOGAG00000032382	PLAC8 (ENSOGAG00000017232)	COPS4 (ENSOGAG00000027198)	LIN54 (ENSOGAG00000002512)	THAP9 (ENSOGAG00000002510)	SEC31A (ENSOGAG00000002506)
Haplorrhini	ANCESTRAL SPECIES	20	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Tarsier	MODERN SPECIES	3229																MAPK10 (ENSTSYG00000005950) #22	ARHGAP24 (ENSTSYG00000012353) #23
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00910000147838	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000153675.a.a.b.e.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00910000147838	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.g.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Mas night monkey	MODERN SPECIES	674	DMP1 (ENSANAG00000035613)	DSPP (ENSANAG00000038291)	SPARCL1 (ENSANAG00000037502)	NUDT9 (ENSANAG00000027203)	ENSANAG00000019492	HSD17B11 (ENSANAG00000032652)	HSD17B13 (ENSANAG00000038096)	KLHL8 (ENSANAG00000028175)	ENSANAG00000034267	AFF1 (ENSANAG00000017095)	C4orf36 (ENSANAG00000015388)	ENSANAG00000011451	SLC10A6 (ENSANAG00000019632)	PTPN13 (ENSANAG00000033639) #21	ENSANAG00000026989	MAPK10 (ENSANAG00000016888) #22	ENSANAG00000022867	ENSANAG00000028685	ARHGAP24 (ENSANAG00000026839) #23	WDFY3 (ENSANAG00000027479) #24	ENSANAG00000019158	CDS1 (ENSANAG00000023006) #26
Cebidae	ANCESTRAL SPECIES	4	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000153675.a.a.b.e.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.g.a.a.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Marmoset	MODERN SPECIES	15	DSPP (ENSCJAG00000040393)	SPARCL1 (ENSCJAG00000006192)	NUDT9 (ENSCJAG00000006159)	HSD17B11 (ENSCJAG00000006150)	HSD17B13 (ENSCJAG00000006120)	ENSCJAG00000070202	KLHL8 (ENSCJAG00000006088)	AFF1 (ENSCJAG00000006047)	ENSCJAG00000083232	ENSCJAG00000078087	ENSCJAG00000075317	C4orf36 (ENSCJAG00000070848)	SLC10A6 (ENSCJAG00000006010)	ENSCJAG00000077823	PTPN13 (ENSCJAG00000005723) #21	MAPK10 (ENSCJAG00000005621) #22	ARHGAP24 (ENSCJAG00000005600) #23	ENSCJAG00000080521	WDFY3 (ENSCJAG00000005382) #24	CDS1 (ENSCJAG00000044197) #26	NKX6-1 (ENSCJAG00000005335) #27	ENSCJAG00000082079	GPAT3 (ENSCJAG00000005314)	ABRAXAS1 (ENSCJAG00000005294)	ENSCJAG00000042247	HELQ (ENSCJAG00000005247)	HPSE (ENSCJAG00000005194)	ENSCJAG00000053040	COQ2 (ENSCJAG00000005180)	ENSCJAG00000072222	ENSCJAG00000000640
Cebidae_a	ANCESTRAL SPECIES	21	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000153675.a.a.b.e.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.g.a.a.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Capuchin	MODERN SPECIES	177	SPP1 (ENSCCAG00000033672)	MEPE (ENSCCAG00000036917)	IBSP (ENSCCAG00000029190)	DMP1 (ENSCCAG00000021738)	DSPP (ENSCCAG00000026109)	SPARCL1 (ENSCCAG00000028187)	NUDT9 (ENSCCAG00000030376)	ENSCCAG00000005825	HSD17B11 (ENSCCAG00000016570)	HSD17B13 (ENSCCAG00000027281)	KLHL8 (ENSCCAG00000019808)	AFF1 (ENSCCAG00000027623)	C4orf36 (ENSCCAG00000029092)	SLC10A6 (ENSCCAG00000034275)	PTPN13 (ENSCCAG00000028694) #21	MAPK10 (ENSCCAG00000020883) #22	ARHGAP24 (ENSCCAG00000024836) #23
Bolivian squirrel monkey	MODERN SPECIES	51	ENSSBOG00000012030	MEPE (ENSSBOG00000031405)	IBSP (ENSSBOG00000031488)	DMP1 (ENSSBOG00000027395)	DSPP (ENSSBOG00000025289)	SPARCL1 (ENSSBOG00000027855)	HSD17B11 (ENSSBOG00000034492)	HSD17B13 (ENSSBOG00000023206)	KLHL8 (ENSSBOG00000021069)	AFF1 (ENSSBOG00000035401)	C4orf36 (ENSSBOG00000035411)	SLC10A6 (ENSSBOG00000035397)	ENSSBOG00000025416	PTPN13 (ENSSBOG00000034136) #21	ENSSBOG00000021152	MAPK10 (ENSSBOG00000029248) #22	ARHGAP24 (ENSSBOG00000036059) #23	WDFY3 (ENSSBOG00000026656) #24	CDS1 (ENSSBOG00000025353) #26	NKX6-1 (ENSSBOG00000032034) #27	GPAT3 (ENSSBOG00000033661)	ABRAXAS1 (ENSSBOG00000021068)	ENSSBOG00000027568	HELQ (ENSSBOG00000034314)	HPSE (ENSSBOG00000025706)	COQ2 (ENSSBOG00000025382)	PLAC8 (ENSSBOG00000028760)	COPS4 (ENSSBOG00000033315)	ENSSBOG00000033305	ENSSBOG00000032347	LIN54 (ENSSBOG00000030273)
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00910000147838	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00910000147934	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000183183.b.a.y.b	ENSGT00390000015549	ENSGT00940000169357	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00910000147934	ENSGT00530000063424.b.d	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000183183.b.a.y.b	ENSGT00390000015549	ENSGT00940000169357	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00910000147934	ENSGT00530000063424.b.d	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000153112.A	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000183183.b.a.y.b	ENSGT00390000015549	ENSGT00940000169357	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00910000147934	ENSGT00530000063424.b.d	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b
Gorilla	MODERN SPECIES	17	MEPE (ENSGGOG00000009745)	IBSP (ENSGGOG00000007024)	DMP1 (ENSGGOG00000026902)	DSPP (ENSGGOG00000024325)	SPARCL1 (ENSGGOG00000015425)	NUDT9 (ENSGGOG00000014777)	HSD17B11 (ENSGGOG00000014710)	HSD17B13 (ENSGGOG00000002954)	ENSGGOG00000022570	KLHL8 (ENSGGOG00000014648)	AFF1 (ENSGGOG00000008497)	ENSGGOG00000037353	C4orf36 (ENSGGOG00000005547)	SLC10A6 (ENSGGOG00000007512)	PTPN13 (ENSGGOG00000025765) #21	MAPK10 (ENSGGOG00000003141) #22	ARHGAP24 (ENSGGOG00000006266) #23	WDFY3 (ENSGGOG00000006370) #24	CDS1 (ENSGGOG00000002418) #26	NKX6-1 (ENSGGOG00000008459) #27	ENSGGOG00000028145	ENSGGOG00000026515	GPAT3 (ENSGGOG00000004211)	ENSGGOG00000024919	ABRAXAS1 (ENSGGOG00000005818)	MRPS18C (ENSGGOG00000008603)	HELQ (ENSGGOG00000008598)	HPSE (ENSGGOG00000002800)	COQ2 (ENSGGOG00000003610)	PLAC8 (ENSGGOG00000007464)	ENSGGOG00000039030
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000153112.A	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000183183.b.a.y.b	ENSGT00390000015549	ENSGT00940000169357	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00910000147934	ENSGT00530000063424.b.d	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b
Pan	ANCESTRAL SPECIES	7	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000153112.A	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000183183.b.a.y.b	ENSGT00390000015549	ENSGT00940000169357	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000160193	ENSGT00940000157266	ENSGT00390000012178.h	ENSGT00940000159024	ENSGT00940000154245.B	ENSGT00390000018121	ENSGT00940000156728	ENSGT00910000144184.q.b.b.a.a	ENSGT00940000157103	ENSGT00940000157059	ENSGT00940000156074	ENSGT00940000160022	ENSGT00940000160857	ENSGT00940000155951.b.m
Chimpanzee	MODERN SPECIES	17	IBSP (ENSPTRG00000016263)	DMP1 (ENSPTRG00000016262)	DSPP (ENSPTRG00000016261)	SPARCL1 (ENSPTRG00000016260)	NUDT9 (ENSPTRG00000016259)	HSD17B11 (ENSPTRG00000022658)	HSD17B13 (ENSPTRG00000016258)	ENSPTRG00000046435	KLHL8 (ENSPTRG00000016256)	AFF1 (ENSPTRG00000016255)	ENSPTRG00000050251	C4H4orf36 (ENSPTRG00000016254)	ENSPTRG00000043177	SLC10A6 (ENSPTRG00000016253)	PTPN13 (ENSPTRG00000016249) #21	MAPK10 (ENSPTRG00000016244) #22	ARHGAP24 (ENSPTRG00000016243) #23	GABRG1 (ENSPTRG00000016024)	GABRA2 (ENSPTRG00000016026)	COX7B2 (ENSPTRG00000016027)	GABRA4 (ENSPTRG00000016029)	GABRB1 (ENSPTRG00000016030)	COMMD8 (ENSPTRG00000016031)	ATP10D (ENSPTRG00000016032)	ENSPTRG00000052754	CORIN (ENSPTRG00000016034)	NFXL1 (ENSPTRG00000016035)	CNGA1 (ENSPTRG00000016036)	ENSPTRG00000039556	NIPAL1 (ENSPTRG00000016038)	TXK (ENSPTRG00000016040)
Bonobo	MODERN SPECIES	17	ENSPPAG00000031090	MEPE (ENSPPAG00000041299)	IBSP (ENSPPAG00000038769)	DMP1 (ENSPPAG00000040896)	SPARCL1 (ENSPPAG00000033615)	NUDT9 (ENSPPAG00000042541)	HSD17B11 (ENSPPAG00000013061)	HSD17B13 (ENSPPAG00000042548)	KLHL8 (ENSPPAG00000030051)	AFF1 (ENSPPAG00000029196)	ENSPPAG00000028030	C4orf36 (ENSPPAG00000043538)	ENSPPAG00000037218	SLC10A6 (ENSPPAG00000007271)	PTPN13 (ENSPPAG00000037012) #21	MAPK10 (ENSPPAG00000042829) #22	ARHGAP24 (ENSPPAG00000036857) #23	GABRG1 (ENSPPAG00000027800)	GABRA2 (ENSPPAG00000028343)	COX7B2 (ENSPPAG00000017844)	GABRA4 (ENSPPAG00000041491)	GABRB1 (ENSPPAG00000041178)	COMMD8 (ENSPPAG00000033705)	ATP10D (ENSPPAG00000012322)	ENSPPAG00000030943	CORIN (ENSPPAG00000032757)	NFXL1 (ENSPPAG00000043425)	CNGA1 (ENSPPAG00000021167)	ENSPPAG00000043420	NIPAL1 (ENSPPAG00000031664)	TXK (ENSPPAG00000037522)
Human	MODERN SPECIES	16	SPP1 (ENSG00000118785)	MEPE (ENSG00000152595)	IBSP (ENSG00000029559)	DMP1 (ENSG00000152592)	DSPP (ENSG00000152591)	SPARCL1 (ENSG00000152583)	NUDT9 (ENSG00000170502)	HSD17B11 (ENSG00000198189)	HSD17B13 (ENSG00000170509)	KLHL8 (ENSG00000145332)	AFF1 (ENSG00000172493)	ENSG00000285458	C4orf36 (ENSG00000163633)	SLC10A6 (ENSG00000145283)	PTPN13 (ENSG00000163629) #21	MAPK10 (ENSG00000109339) #22	ARHGAP24 (ENSG00000138639) #23	WDFY3 (ENSG00000163625) #24	CDS1 (ENSG00000163624) #26	NKX6-1 (ENSG00000163623) #27	GPAT3 (ENSG00000138678)	ABRAXAS1 (ENSG00000163322)	MRPS18C (ENSG00000163319)	HELQ (ENSG00000163312)	HPSE (ENSG00000173083)	COQ2 (ENSG00000173085)	PLAC8 (ENSG00000145287)	COPS4 (ENSG00000138663)	LIN54 (ENSG00000189308)	THAP9 (ENSG00000168152)	SEC31A (ENSG00000138674)
Orangutan	MODERN SPECIES	17	PKD2 (ENSPPYG00000014921)	SPP1 (ENSPPYG00000037006)	MEPE (ENSPPYG00000014919)	IBSP (ENSPPYG00000014918)	DMP1 (ENSPPYG00000014917)	SPARCL1 (ENSPPYG00000014915)	NUDT9 (ENSPPYG00000014914)	HSD17B11 (ENSPPYG00000014913)	HSD17B13 (ENSPPYG00000014912)	ENSPPYG00000039765	KLHL8 (ENSPPYG00000014911)	AFF1 (ENSPPYG00000014910)	C4orf36 (ENSPPYG00000014909)	SLC10A6 (ENSPPYG00000040769)	PTPN13 (ENSPPYG00000014908) #21	MAPK10 (ENSPPYG00000014907) #22	ARHGAP24 (ENSPPYG00000014906) #23	WDFY3 (ENSPPYG00000014903) #24	CDS1 (ENSPPYG00000014902) #26	NKX6-1 (ENSPPYG00000014901) #27	GPAT3 (ENSPPYG00000014900)	ABRAXAS1 (ENSPPYG00000036982)	MRPS18C (ENSPPYG00000025867)	HELQ (ENSPPYG00000014897)	HPSE (ENSPPYG00000014896)	COQ2 (ENSPPYG00000014895)	PLAC8 (ENSPPYG00000014894)	ENSPPYG00000035037	LIN54 (ENSPPYG00000014892)	THAP9 (ENSPPYG00000014891)	SEC31A (ENSPPYG00000014890)
Gibbon	MODERN SPECIES	24	MEPE (ENSNLEG00000009593)	IBSP (ENSNLEG00000009587)	DMP1 (ENSNLEG00000009581)	DSPP (ENSNLEG00000009572)	SPARCL1 (ENSNLEG00000009544)	NUDT9 (ENSNLEG00000032434)	HSD17B11 (ENSNLEG00000033296)	HSD17B13 (ENSNLEG00000009489)	KLHL8 (ENSNLEG00000009463)	AFF1 (ENSNLEG00000009429)	ENSNLEG00000027926	C4orf36 (ENSNLEG00000030589)	ENSNLEG00000033518	SLC10A6 (ENSNLEG00000009412)	PTPN13 (ENSNLEG00000009323) #21	MAPK10 (ENSNLEG00000009285) #22	ARHGAP24 (ENSNLEG00000009269) #23	WDFY3 (ENSNLEG00000009171) #24	CDS1 (ENSNLEG00000009160) #26	ENSNLEG00000028024	NKX6-1 (ENSNLEG00000009157) #27	GPAT3 (ENSNLEG00000034519)	ABRAXAS1 (ENSNLEG00000009133)	MRPS18C (ENSNLEG00000009119)	HELQ (ENSNLEG00000009088)	HPSE (ENSNLEG00000009047)	COQ2 (ENSNLEG00000009024)	PLAC8 (ENSNLEG00000009010)	COPS4 (ENSNLEG00000008953)	LIN54 (ENSNLEG00000008934)	THAP9 (ENSNLEG00000008931)
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00910000147838	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.c	ENSGT00910000147934	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329
Rhinopithecus	ANCESTRAL SPECIES	882																ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Golden snub-nosed monkey	MODERN SPECIES	1526															ENSRROG00000024347	MAPK10 (ENSRROG00000038181) #22	ARHGAP24 (ENSRROG00000035044) #23
Black snub-nosed monkey	MODERN SPECIES	2137																MAPK10 (ENSRBIG00000013381) #22	ARHGAP24 (ENSRBIG00000028047) #23
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.c	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Vervet Monkey	MODERN SPECIES	26	PKD2 (ENSCSAG00000004305)	SPP1 (ENSCSAG00000004308)	MEPE (ENSCSAG00000004309)	IBSP (ENSCSAG00000004313)	DMP1 (ENSCSAG00000004318)	SPARCL1 (ENSCSAG00000004320)	NUDT9 (ENSCSAG00000004323)	HSD17B11 (ENSCSAG00000004327)	HSD17B13 (ENSCSAG00000004328)	KLHL8 (ENSCSAG00000004331)	AFF1 (ENSCSAG00000004333)	C4orf36 (ENSCSAG00000004334)	SLC10A6 (ENSCSAG00000004337)	PTPN13 (ENSCSAG00000004340) #21	ENSCSAG00000000413	MAPK10 (ENSCSAG00000004343) #22	ARHGAP24 (ENSCSAG00000004344) #23	ENSCSAG00000004347 #23	WDFY3 (ENSCSAG00000004361) #24	CDS1 (ENSCSAG00000004368) #26	NKX6-1 (ENSCSAG00000004373) #27	GPAT3 (ENSCSAG00000004383)	ABRAXAS1 (ENSCSAG00000004398)	HELQ (ENSCSAG00000004405)	HPSE (ENSCSAG00000004411)	COQ2 (ENSCSAG00000004424)	PLAC8 (ENSCSAG00000004430)	COPS4 (ENSCSAG00000004434)	LIN54 (ENSCSAG00000004440)	ENSCSAG00000004444	SEC31A (ENSCSAG00000004450)
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.c	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Macaca	ANCESTRAL SPECIES	18	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Pig-tailed macaque	MODERN SPECIES	560	PKD2 (ENSMNEG00000029251)	SPP1 (ENSMNEG00000043112)	MEPE (ENSMNEG00000025404)	IBSP (ENSMNEG00000041631)	DMP1 (ENSMNEG00000031482)	DSPP (ENSMNEG00000028809)	SPARCL1 (ENSMNEG00000028043)	NUDT9 (ENSMNEG00000033450)	HSD17B11 (ENSMNEG00000029758)	HSD17B13 (ENSMNEG00000043671)	KLHL8 (ENSMNEG00000030082)	AFF1 (ENSMNEG00000031536)	C4orf36 (ENSMNEG00000029673)	SLC10A6 (ENSMNEG00000040873)	PTPN13 (ENSMNEG00000030866) #21	MAPK10 (ENSMNEG00000043177) #22	ARHGAP24 (ENSMNEG00000007102) #23
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00390000002509	ENSGT01100000263539.b.b.b.b.a.a.b.a.a.a	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000155133.b.i #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000156935	ENSGT00390000014817	ENSGT00390000008110	ENSGT00390000013532	ENSGT00940000153284.b	ENSGT00870000136875	ENSGT00980000202055.A.b.a	ENSGT00940000158643	ENSGT00390000011192	ENSGT01080000257472	ENSGT00940000158757	ENSGT00390000003601.b	ENSGT00940000156043	ENSGT00940000156021
Crab-eating macaque	MODERN SPECIES	15	ENSMFAG00000063129	MEPE (ENSMFAG00000042632)	IBSP (ENSMFAG00000029098)	DMP1 (ENSMFAG00000002413)	SPARCL1 (ENSMFAG00000031337)	NUDT9 (ENSMFAG00000002084)	HSD17B11 (ENSMFAG00000038343)	HSD17B13 (ENSMFAG00000040860)	KLHL8 (ENSMFAG00000041071)	AFF1 (ENSMFAG00000037700)	ENSMFAG00000061398	C4orf36 (ENSMFAG00000049033)	SLC10A6 (ENSMFAG00000003336)	PTPN13 (ENSMFAG00000001116) #21	ENSMFAG00000057457 #21	MAPK10 (ENSMFAG00000001537) #22	ENSMFAG00000065494	ARHGAP24 (ENSMFAG00000032831) #23	DCUN1D4 (ENSMFAG00000003049)	LRRC66 (ENSMFAG00000035332)	SGCB (ENSMFAG00000061360)	ENSMFAG00000050881	SPATA18 (ENSMFAG00000043327)	ENSMFAG00000063621	USP46 (ENSMFAG00000041158)	ERVMER34-1 (ENSMFAG00000047188)	ENSMFAG00000047996	RASL11B (ENSMFAG00000037233)	ENSMFAG00000059603	ENSMFAG00000058674	SCFD2 (ENSMFAG00000042186)
Rhesus	MODERN SPECIES	15	ENSMMUG00000058934	MEPE (ENSMMUG00000011110)	IBSP (ENSMMUG00000011111)	DMP1 (ENSMMUG00000011114)	SPARCL1 (ENSMMUG00000019047)	NUDT9 (ENSMMUG00000019043)	HSD17B11 (ENSMMUG00000019041)	HSD17B13 (ENSMMUG00000019040)	KLHL8 (ENSMMUG00000014080)	ENSMMUG00000051677	AFF1 (ENSMMUG00000014076)	C5H4orf36 (ENSMMUG00000059657)	SLC10A6 (ENSMMUG00000003734)	PTPN13 (ENSMMUG00000003726) #21	ENSMMUG00000063428	MAPK10 (ENSMMUG00000008342) #22	ARHGAP24 (ENSMMUG00000008341) #23	ENSMMUG00000051109	DCUN1D4 (ENSMMUG00000008579)	LRRC66 (ENSMMUG00000018939)	SPATA18 (ENSMMUG00000018943)	USP46 (ENSMMUG00000023333)	ERVMER34-1 (ENSMMUG00000007951)	ENSMMUG00000059074	RASL11B (ENSMMUG00000052882)	SCFD2 (ENSMMUG00000017393)	LNX1 (ENSMMUG00000017401)	CHIC2 (ENSMMUG00000050730)	GSX2 (ENSMMUG00000048263)	PDGFRA (ENSMMUG00000017395)	ENSMMUG00000059659
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223.o #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.c	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Olive baboon	MODERN SPECIES	13	SPP1 (ENSPANG00000017630)	MEPE (ENSPANG00000019861)	IBSP (ENSPANG00000008567)	DMP1 (ENSPANG00000014206)	SPARCL1 (ENSPANG00000014207)	NUDT9 (ENSPANG00000012884)	ENSPANG00000050649	ENSPANG00000050843	HSD17B11 (ENSPANG00000011210)	HSD17B13 (ENSPANG00000007692)	KLHL8 (ENSPANG00000011211)	AFF1 (ENSPANG00000016722)	C4orf36 (ENSPANG00000047799)	SLC10A6 (ENSPANG00000008483)	PTPN13 (ENSPANG00000016948) #21	MAPK10 (ENSPANG00000021440) #22	ARHGAP24 (ENSPANG00000008484) #23	ENSPANG00000038403	WDFY3 (ENSPANG00000022290) #24	ENSPANG00000020530 #26	NKX6-1 (ENSPANG00000025577) #27	ENSPANG00000044091	GPAT3 (ENSPANG00000034933)	ENSPANG00000033931	HELQ (ENSPANG00000005130)	HPSE (ENSPANG00000017276)	ENSPANG00000037682	COQ2 (ENSPANG00000009980)	ENSPANG00000004762	COPS4 (ENSPANG00000021637)	LIN54 (ENSPANG00000009917)
Cercopithecinae_d	ANCESTRAL SPECIES	38	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.j #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223.o #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.c	ENSGT00530000063424.b	ENSGT00940000159471.c.b	ENSGT00390000003791.g.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00980000202311	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Sooty mangabey	MODERN SPECIES	507	PKD2 (ENSCATG00000043739)	SPP1 (ENSCATG00000036269)	MEPE (ENSCATG00000042357)	IBSP (ENSCATG00000040962)	DMP1 (ENSCATG00000035040)	DSPP (ENSCATG00000039736)	SPARCL1 (ENSCATG00000045171)	NUDT9 (ENSCATG00000040205)	HSD17B11 (ENSCATG00000040665)	HSD17B13 (ENSCATG00000025627)	KLHL8 (ENSCATG00000039730)	AFF1 (ENSCATG00000039501)	C4orf36 (ENSCATG00000036591)	SLC10A6 (ENSCATG00000032176)	PTPN13 (ENSCATG00000017113) #21	MAPK10 (ENSCATG00000043627) #22	ARHGAP24 (ENSCATG00000038010) #23	ENSCATG00000004763	WDFY3 (ENSCATG00000028669) #24	CDS1 (ENSCATG00000037354) #26	NKX6-1 (ENSCATG00000020976) #27	GPAT3 (ENSCATG00000031129)	ABRAXAS1 (ENSCATG00000035244)	ENSCATG00000045101	MRPS18C (ENSCATG00000040697)	HELQ (ENSCATG00000034442)	HPSE (ENSCATG00000007349)	COQ2 (ENSCATG00000030044)	PLAC8 (ENSCATG00000039322)	COPS4 (ENSCATG00000030109)	LIN54 (ENSCATG00000040443)
Drill	MODERN SPECIES	1382															ENSMLEG00000037971 #21	MAPK10 (ENSMLEG00000025936) #22	ARHGAP24 (ENSMLEG00000039721) #23	ENSMLEG00000026242	NPVF (ENSMLEG00000040253)	C7orf31 (ENSMLEG00000036577)
Euarchontoglires_A	ANCESTRAL SPECIES	9	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Tree shrew	MODERN SPECIES	1863																MAPK10 (ENSTBEG00000011507) #22	ENSTBEG00000011504	ARHGAP24 (ENSTBEG00000010943) #23
Glires	ANCESTRAL SPECIES	8	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Lagomorpha	ANCESTRAL SPECIES	129											ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00940000161743	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111489	ENSGT00730000111375	ENSGT00390000002485
Rabbit	MODERN SPECIES	6	SEC31A (ENSOCUG00000014918)	THAP9 (ENSOCUG00000000333)	LIN54 (ENSOCUG00000012516)	COPS4 (ENSOCUG00000003409)	PLAC8 (ENSOCUG00000029190)	COQ2 (ENSOCUG00000011119)	HPSE (ENSOCUG00000011126)	KLHL8 (ENSOCUG00000002115)	AFF1 (ENSOCUG00000002105)	ENSOCUG00000024043	C4orf36 (ENSOCUG00000014900)	SLC10A6 (ENSOCUG00000014905)	PTPN13 (ENSOCUG00000012421) #21	ENSOCUG00000035426	ENSOCUG00000038885	MAPK10 (ENSOCUG00000010663) #22	ARHGAP24 (ENSOCUG00000010654) #23	ENSOCUG00000025897	WDFY3 (ENSOCUG00000017155) #24	CDS1 (ENSOCUG00000017147) #26	NKX6-1 (ENSOCUG00000028183) #27	ENSOCUG00000034961	ENSOCUG00000027309	ENSOCUG00000030881	GPAT3 (ENSOCUG00000012071)	ENSOCUG00000034356	ABRAXAS1 (ENSOCUG00000013327)	ENSOCUG00000031430	HELQ (ENSOCUG00000013294)	ENSOCUG00000035440	HSD17B13 (ENSOCUG00000007232)
Pika	MODERN SPECIES	1583																MAPK10 (ENSOPRG00000009834) #22	ARHGAP24 (ENSOPRG00000009814) #23
Rodentia	ANCESTRAL SPECIES	13	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Rodentia_A	ANCESTRAL SPECIES	20	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Hystricomorpha	ANCESTRAL SPECIES	61	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.p	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Hystricomorpha_a	ANCESTRAL SPECIES	68	ENSGT00940000157870	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.p	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000158682	ENSGT00940000154837.f
Hystricomorpha_b	ANCESTRAL SPECIES	45	ENSGT00390000017018.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.p	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000158682	ENSGT00940000154837.f
Long-tailed chinchilla	MODERN SPECIES	181	ENSCLAG00000003868	PKD2 (ENSCLAG00000003929)	SPP1 (ENSCLAG00000004133)	IBSP (ENSCLAG00000004300)	DMP1 (ENSCLAG00000004368)	SPARCL1 (ENSCLAG00000004209)	ENSCLAG00000004292	NUDT9 (ENSCLAG00000004808)	HSD17B11 (ENSCLAG00000004877)	HSD17B13 (ENSCLAG00000004944)	KLHL8 (ENSCLAG00000005233)	AFF1 (ENSCLAG00000005537)	C4orf36 (ENSCLAG00000005964)	SLC10A6 (ENSCLAG00000006091)	PTPN13 (ENSCLAG00000006187) #21	MAPK10 (ENSCLAG00000007752) #22	ARHGAP24 (ENSCLAG00000004468) #23	WDFY3 (ENSCLAG00000004977) #24	CDS1 (ENSCLAG00000006900) #26	GPAT3 (ENSCLAG00000007713)	ABRAXAS1 (ENSCLAG00000008039)	ENSCLAG00000008205	HELQ (ENSCLAG00000004733)	HPSE (ENSCLAG00000004879)	ENSCLAG00000004962	PLAC8 (ENSCLAG00000005017)	COPS4 (ENSCLAG00000005060)	LIN54 (ENSCLAG00000006502)	N4BP1 (ENSCLAG00000006600)	SIAH1 (ENSCLAG00000006639)	LONP2 (ENSCLAG00000006722)
Degu	MODERN SPECIES	69	ENSODEG00000007537	ENSODEG00000019391	HSD17B11 (ENSODEG00000007389)	HSD17B13 (ENSODEG00000008266)	ENSODEG00000006945	ENSODEG00000007146	AFF1 (ENSODEG00000007407)	C4orf36 (ENSODEG00000007345)	SLC10A6 (ENSODEG00000011019)	PTPN13 (ENSODEG00000007351) #21	ENSODEG00000019627	ENSODEG00000009245	ENSODEG00000007996	ENSODEG00000008176	ENSODEG00000019462 #28	MAPK10 (ENSODEG00000007899) #22	ARHGAP24 (ENSODEG00000009471) #23	ENSODEG00000007654	WDFY3 (ENSODEG00000007240) #24	CDS1 (ENSODEG00000008599) #26	NKX6-1 (ENSODEG00000009272) #27	ENSODEG00000007028	ENSODEG00000007416	ENSODEG00000019508	ENSODEG00000008639	ENSODEG00000008636	ABRAXAS1 (ENSODEG00000009343)	ENSODEG00000007599	HELQ (ENSODEG00000008738)	HPSE (ENSODEG00000007894)	COQ2 (ENSODEG00000007764)
Guinea pig	MODERN SPECIES	33	PPEF2 (ENSCPOG00000007202)	PKD2 (ENSCPOG00000014588)	SPP1 (ENSCPOG00000014587)	IBSP (ENSCPOG00000035416)	DMP1 (ENSCPOG00000009517)	SPARCL1 (ENSCPOG00000001455)	NUDT9 (ENSCPOG00000009689)	HSD17B11 (ENSCPOG00000038248)	HSD17B13 (ENSCPOG00000014141)	KLHL8 (ENSCPOG00000001491)	AFF1 (ENSCPOG00000034568)	ENSCPOG00000024866	C4orf36 (ENSCPOG00000003504)	SLC10A6 (ENSCPOG00000010363)	PTPN13 (ENSCPOG00000007122) #21	MAPK10 (ENSCPOG00000013605) #22	ARHGAP24 (ENSCPOG00000012796) #23	WDFY3 (ENSCPOG00000006746) #24	CDS1 (ENSCPOG00000030064) #26	GPAT3 (ENSCPOG00000014802)	ABRAXAS1 (ENSCPOG00000001374)	MRPS18C (ENSCPOG00000009198)	HELQ (ENSCPOG00000009180)	HPSE (ENSCPOG00000001853)	COQ2 (ENSCPOG00000035211)	PLAC8 (ENSCPOG00000026026)	COPS4 (ENSCPOG00000020170)	LIN54 (ENSCPOG00000001139)	N4BP1 (ENSCPOG00000022635)	SIAH1 (ENSCPOG00000020708)	LONP2 (ENSCPOG00000003859)
Naked mole-rat female	MODERN SPECIES	27	NUDT9 (ENSHGLG00000010306)	HSD17B11 (ENSHGLG00000009549)	ENSHGLG00000008840	ENSHGLG00000008487	ENSHGLG00000032120	ENSHGLG00000008155	AFF1 (ENSHGLG00000001384)	ENSHGLG00000045541	ENSHGLG00000001308	SLC10A6 (ENSHGLG00000001287)	ENSHGLG00000001145 #21	ENSHGLG00000005605	ENSHGLG00000019806	ENSHGLG00000034553	ENSHGLG00000046052	ENSHGLG00000000901 #22	ENSHGLG00000001024	ENSHGLG00000019846	ENSHGLG00000000768 #23	ENSHGLG00000000796	ENSHGLG00000041678	WDFY3 (ENSHGLG00000002966) #24	CDS1 (ENSHGLG00000049384) #26	ENSHGLG00000004589 #27	ENSHGLG00000004204	ENSHGLG00000035706	ENSHGLG00000037327	ENSHGLG00000045281	ENSHGLG00000043322	Gpat3 (ENSHGLG00000003421)	ENSHGLG00000037131
Sciuridae	ANCESTRAL SPECIES	19	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Marmotini	ANCESTRAL SPECIES	47	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Marmotini_b	ANCESTRAL SPECIES	271											ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Squirrel	MODERN SPECIES	492															HSD17B13 (ENSSTOG00000015091)	MAPK10 (ENSSTOG00000001819) #22	ARHGAP24 (ENSSTOG00000001812) #23
Arctic ground squirrel	MODERN SPECIES	594													C4orf36 (ENSUPAG00010010412)	SLC10A6 (ENSUPAG00010010452)	PTPN13 (ENSUPAG00010010460) #21	MAPK10 (ENSUPAG00010010527) #22	ARHGAP24 (ENSUPAG00010010745) #23
Alpin marmot	MODERN SPECIES	59																MAPK10 (ENSMMMG00000003638) #22	ARHGAP24 (ENSMMMG00000003903) #23	WDFY3 (ENSMMMG00000004054) #24	CDS1 (ENSMMMG00000004652) #26	ENSMMMG00000004675	NKX6-1 (ENSMMMG00000004682) #27	GPAT3 (ENSMMMG00000004703)	ABRAXAS1 (ENSMMMG00000004749)	MRPS18C (ENSMMMG00000004764)	ENSMMMG00000004773	ENSMMMG00000004782	HPSE (ENSMMMG00000004794)	COQ2 (ENSMMMG00000004820)	PLAC8 (ENSMMMG00000004890)	COPS4 (ENSMMMG00000004910)	LIN54 (ENSMMMG00000004923)
Eurasian red squirrel	MODERN SPECIES	18	SPP1 (ENSSVLG00005013941)	MEPE (ENSSVLG00005014128)	IBSP (ENSSVLG00005014230)	DMP1 (ENSSVLG00005014323)	DSPP (ENSSVLG00005014439)	SPARCL1 (ENSSVLG00005014496)	NUDT9 (ENSSVLG00005014673)	HSD17B11 (ENSSVLG00005014755)	HSD17B13 (ENSSVLG00005014916)	ENSSVLG00005015085	ENSSVLG00005015156	AFF1 (ENSSVLG00005015438)	C4orf36 (ENSSVLG00005015848)	SLC10A6 (ENSSVLG00005015893)	PTPN13 (ENSSVLG00005016102) #21	MAPK10 (ENSSVLG00005018125) #22	ARHGAP24 (ENSSVLG00005018879) #23	WDFY3 (ENSSVLG00005019113) #24	CDS1 (ENSSVLG00005019388) #26	NKX6-1 (ENSSVLG00005019440) #27	ENSSVLG00005019498	GPAT3 (ENSSVLG00005019557)	ABRAXAS1 (ENSSVLG00005019610)	ENSSVLG00005019766	HELQ (ENSSVLG00005019975)	ENSSVLG00005020214	HPSE (ENSSVLG00005020319)	COQ2 (ENSSVLG00005020613)	ENSSVLG00005020728	PLAC8 (ENSSVLG00005020747)	COPS4 (ENSSVLG00005020796)
Rodentia_B	ANCESTRAL SPECIES	19	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00900000143450	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Kangaroo rat	MODERN SPECIES	368																Mapk10 (ENSDORG00000010086) #22	Arhgap24 (ENSDORG00000010084) #23	ENSDORG00000011115 ##24	Cds1 (ENSDORG00000003056) #26	Nkx6-1 (ENSDORG00000004413) #27	ENSDORG00000008939	Abraxas1 (ENSDORG00000012750)	Mrps18c (ENSDORG00000012749)	Helq (ENSDORG00000012747)	Hpse (ENSDORG00000001494)	ENSDORG00000010454	Plac8 (ENSDORG00000002455)	Cops4 (ENSDORG00000027841)	Lin54 (ENSDORG00000002968)	ENSDORG00000010518	ENSDORG00000015366
Myomorpha	ANCESTRAL SPECIES	19	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Muroidea	ANCESTRAL SPECIES	17	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Muroidea_A	ANCESTRAL SPECIES	13	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Cricetidae	ANCESTRAL SPECIES	14	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Cricetinae	ANCESTRAL SPECIES	9	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Chinese hamster chok1gshd	MODERN SPECIES	76	Ibsp (ENSCGRG00001016273)	Dmp1 (ENSCGRG00001013845)	Sparcl1 (ENSCGRG00001009590)	Gm17660 (ENSCGRG00001013296)	Nudt9 (ENSCGRG00001011849)	Hsd17b11 (ENSCGRG00001007844)	Hsd17b13 (ENSCGRG00001005914)	ENSCGRG00001023510	Klhl8 (ENSCGRG00001018481)	Aff1 (ENSCGRG00001015769)	1700016H13Rik (ENSCGRG00001009503)	Slc10a6 (ENSCGRG00001004482)	Ptpn13 (ENSCGRG00001022752) #21	ENSCGRG00001000851	ENSCGRG00001000121	Mapk10 (ENSCGRG00001014731) #22	Arhgap24 (ENSCGRG00001022938) #23	Wdfy3 (ENSCGRG00001020063) #24	Cds1 (ENSCGRG00001009233) #26	Nkx6-1 (ENSCGRG00001015708) #27	ENSCGRG00001010629	Gpat3 (ENSCGRG00001017757)	Abraxas1 (ENSCGRG00001009765)	Mrps18c (ENSCGRG00001000103)	Helq (ENSCGRG00001024451)	Hpse (ENSCGRG00001015338)	Coq2 (ENSCGRG00001019305)	ENSCGRG00001016525	Plac8 (ENSCGRG00001015032)	Cops4 (ENSCGRG00001000211)	Lin54 (ENSCGRG00001018316)
Golden Hamster	MODERN SPECIES	679	Spp1 (ENSMAUG00000018138)	Mepe (ENSMAUG00000017270)	Ibsp (ENSMAUG00000016877)	Dmp1 (ENSMAUG00000005904)	Dspp (ENSMAUG00000003984)	Sparcl1 (ENSMAUG00000001180)	Gm17660 (ENSMAUG00000000460)	Nudt9 (ENSMAUG00000008475)	Hsd17b11 (ENSMAUG00000008255)	Hsd17b13 (ENSMAUG00000000594)	Klhl8 (ENSMAUG00000018112)	Aff1 (ENSMAUG00000010241)	1700016H13Rik (ENSMAUG00000008304)	Slc10a6 (ENSMAUG00000006807)	Ptpn13 (ENSMAUG00000000699) #21	Mapk10 (ENSMAUG00000017023) #22	Arhgap24 (ENSMAUG00000014737) #23	Wdfy3 (ENSMAUG00000008899) #24	Cds1 (ENSMAUG00000000198) #26	Nkx6-1 (ENSMAUG00000019458) #27	ENSMAUG00000015928	Abraxas1 (ENSMAUG00000004180)	ENSMAUG00000001167	Helq (ENSMAUG00000000249)	Hpse (ENSMAUG00000014670)	ENSMAUG00000013830	Lin54 (ENSMAUG00000012291)	ENSMAUG00000013778
Cricetidae_B	ANCESTRAL SPECIES	9	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Northern American deer mouse	MODERN SPECIES	1	Spp1 (ENSPEMG00000009651)	Mepe (ENSPEMG00000009010)	Ibsp (ENSPEMG00000025223)	Dmp1 (ENSPEMG00000006834)	Dspp (ENSPEMG00000025899)	ENSPEMG00000004426	Gm17660 (ENSPEMG00000000070)	Nudt9 (ENSPEMG00000018648)	Hsd17b11 (ENSPEMG00000016965)	Hsd17b13 (ENSPEMG00000014885)	Klhl8 (ENSPEMG00000011568)	Aff1 (ENSPEMG00000000785)	1700016H13Rik (ENSPEMG00000026458)	Slc10a6 (ENSPEMG00000016611)	Ptpn13 (ENSPEMG00000016673) #21	Mapk10 (ENSPEMG00000011205) #22	Arhgap24 (ENSPEMG00000007830) #23	Wdfy3 (ENSPEMG00000016957) #24	ENSPEMG00000025914	Cds1 (ENSPEMG00000017042) #26	Nkx6-1 (ENSPEMG00000015701) #27	ENSPEMG00000031139	Gpat3 (ENSPEMG00000014850)	Abraxas1 (ENSPEMG00000009827)	Mrps18c (ENSPEMG00000008390)	Helq (ENSPEMG00000007325)	Hpse (ENSPEMG00000005247)	Coq2 (ENSPEMG00000002210)	ENSPEMG00000013839	ENSPEMG00000014517	Cops4 (ENSPEMG00000013213)
Prairie vole	MODERN SPECIES	349	Mepe (ENSMOCG00000013370)	Ibsp (ENSMOCG00000004131)	Dmp1 (ENSMOCG00000010313)	ENSMOCG00000005741	Sparcl1 (ENSMOCG00000020685)	Gm17660 (ENSMOCG00000000931)	Nudt9 (ENSMOCG00000013057)	Hsd17b11 (ENSMOCG00000010971)	Hsd17b13 (ENSMOCG00000022291)	Klhl8 (ENSMOCG00000010742)	Aff1 (ENSMOCG00000017389)	1700016H13Rik (ENSMOCG00000015080)	Slc10a6 (ENSMOCG00000003945)	Ptpn13 (ENSMOCG00000021839) #21	ENSMOCG00000018036	Mapk10 (ENSMOCG00000014375) #22	Arhgap24 (ENSMOCG00000002718) #23	Wdfy3 (ENSMOCG00000001865) #24	Cds1 (ENSMOCG00000003586) #26	Nkx6-1 (ENSMOCG00000001725) #27	ENSMOCG00000000258	Abraxas1 (ENSMOCG00000022766)	ENSMOCG00000015591	Helq (ENSMOCG00000014354)	Hpse (ENSMOCG00000018235)	ENSMOCG00000015925	Plac8 (ENSMOCG00000013684)	ENSMOCG00000009783	Cops4 (ENSMOCG00000021257)	Lin54 (ENSMOCG00000022873)	ENSMOCG00000019564
Murinae	ANCESTRAL SPECIES	12	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Mus	ANCESTRAL SPECIES	14	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Mus_A	ANCESTRAL SPECIES	6	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.t	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.j	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT01030000234578.A.a
Mus_B	ANCESTRAL SPECIES	4	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.t	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.j	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Mouse	MODERN SPECIES	14	Spp1 (ENSMUSG00000029304)	Mepe (ENSMUSG00000053863)	Ibsp (ENSMUSG00000029306)	Dmp1 (ENSMUSG00000029307)	Dspp (ENSMUSG00000053268)	Sparcl1 (ENSMUSG00000029309)	Gm17660 (ENSMUSG00000091034)	Nudt9 (ENSMUSG00000029310)	Hsd17b11 (ENSMUSG00000029311)	Hsd17b13 (ENSMUSG00000034528)	Klhl8 (ENSMUSG00000029312)	Aff1 (ENSMUSG00000029313)	1700016H13Rik (ENSMUSG00000029320)	Slc10a6 (ENSMUSG00000029321)	Ptpn13 (ENSMUSG00000034573) #21	Mapk10 (ENSMUSG00000046709) #22	Arhgap24 (ENSMUSG00000057315) #23	Wdfy3 (ENSMUSG00000043940) #24	Cds1 (ENSMUSG00000029330) #26	Nkx6-1 (ENSMUSG00000035187) #27	Gpat3 (ENSMUSG00000029314)	Abraxas1 (ENSMUSG00000035234)	Mrps18c (ENSMUSG00000016833)	Helq (ENSMUSG00000035266)	Hpse (ENSMUSG00000035273)	Coq2 (ENSMUSG00000029319)	Plac8 (ENSMUSG00000029322)	Cops4 (ENSMUSG00000035297)	Lin54 (ENSMUSG00000118665)	Sec31a (ENSMUSG00000035325)	Tmem150c (ENSMUSG00000050640)
Mus_C	ANCESTRAL SPECIES	4	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00700000106112	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.t.b	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.j	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00390000003175.a.b	ENSGT00940000162090
Steppe mouse	MODERN SPECIES	3359																Mapk10 (ENSMSIG00000000530) #22	Arhgap24 (ENSMSIG00000001047) #23	ENSMSIG00000001116	Wdfy3 (ENSMSIG00000001158) #24	Cds1 (ENSMSIG00000001600) #26	Nkx6-1 (ENSMSIG00000001674) #27	Gpat3 (ENSMSIG00000001712)	Abraxas1 (ENSMSIG00000001786)	ENSMSIG00000001831	Helq (ENSMSIG00000001906)	Hpse (ENSMSIG00000002003)	ENSMSIG00000002040	Plac8 (ENSMSIG00000002072)	Cops4 (ENSMSIG00000002210)	Lin54 (ENSMSIG00000002294)	Sec31a (ENSMSIG00000002575)
spretus	MODERN SPECIES	14	Spp1 (MGP_SPRETEiJ_G0028477)	Mepe (MGP_SPRETEiJ_G0028476)	Ibsp (MGP_SPRETEiJ_G0028475)	Dmp1 (MGP_SPRETEiJ_G0028474)	Dspp (MGP_SPRETEiJ_G0028473)	Sparcl1 (MGP_SPRETEiJ_G0028472)	Gm17660 (MGP_SPRETEiJ_G0028471)	Nudt9 (MGP_SPRETEiJ_G0028470)	Hsd17b11 (MGP_SPRETEiJ_G0028469)	Hsd17b13 (MGP_SPRETEiJ_G0028468)	Klhl8 (MGP_SPRETEiJ_G0028467)	Aff1 (MGP_SPRETEiJ_G0028466)	1700016H13Rik (MGP_SPRETEiJ_G0028465)	Slc10a6 (MGP_SPRETEiJ_G0028464)	Ptpn13 (MGP_SPRETEiJ_G0028463) #21	Mapk10 (MGP_SPRETEiJ_G0028462) #22	Arhgap24 (MGP_SPRETEiJ_G0028461) #23	Wdfy3 (MGP_SPRETEiJ_G0028460) #24	Cds1 (MGP_SPRETEiJ_G0028459) #26	Nkx6-1 (MGP_SPRETEiJ_G0028458) #27	Gpat3 (MGP_SPRETEiJ_G0028457)	Abraxas1 (MGP_SPRETEiJ_G0028456)	Mrps18c (MGP_SPRETEiJ_G0028455)	Helq (MGP_SPRETEiJ_G0028454)	Hpse (MGP_SPRETEiJ_G0028453)	Coq2 (MGP_SPRETEiJ_G0028452)	Plac8 (MGP_SPRETEiJ_G0028451)	Cops4 (MGP_SPRETEiJ_G0028450)	Lin54 (MGP_SPRETEiJ_G0028449)	Sec31a (MGP_SPRETEiJ_G0028448)	Tmem150c (MGP_SPRETEiJ_G0028447)
Ryukyu mouse	MODERN SPECIES	14	Spp1 (MGP_CAROLIEiJ_G0027480)	Mepe (MGP_CAROLIEiJ_G0027479)	Ibsp (MGP_CAROLIEiJ_G0027478)	Dmp1 (MGP_CAROLIEiJ_G0027477)	Dspp (MGP_CAROLIEiJ_G0027476)	Sparcl1 (MGP_CAROLIEiJ_G0027475)	Gm17660 (MGP_CAROLIEiJ_G0027474)	Nudt9 (MGP_CAROLIEiJ_G0027473)	Hsd17b11 (MGP_CAROLIEiJ_G0027472)	Hsd17b13 (MGP_CAROLIEiJ_G0027471)	Klhl8 (MGP_CAROLIEiJ_G0027470)	Aff1 (MGP_CAROLIEiJ_G0027469)	1700016H13Rik (MGP_CAROLIEiJ_G0027468)	Slc10a6 (MGP_CAROLIEiJ_G0027467)	Ptpn13 (MGP_CAROLIEiJ_G0027466) #21	Mapk10 (MGP_CAROLIEiJ_G0027465) #22	Arhgap24 (MGP_CAROLIEiJ_G0027464) #23	Wdfy3 (MGP_CAROLIEiJ_G0027463) #24	Cds1 (MGP_CAROLIEiJ_G0027462) #26	Nkx6-1 (MGP_CAROLIEiJ_G0027461) #27	Gpat3 (MGP_CAROLIEiJ_G0027460)	Abraxas1 (MGP_CAROLIEiJ_G0027459)	MGP_CAROLIEiJ_G0027458	Helq (MGP_CAROLIEiJ_G0027457)	Hpse (MGP_CAROLIEiJ_G0027456)	Coq2 (MGP_CAROLIEiJ_G0027455)	Plac8 (MGP_CAROLIEiJ_G0027454)	Cops4 (MGP_CAROLIEiJ_G0027453)	Lin54 (MGP_CAROLIEiJ_G0027452)	Sec31a (MGP_CAROLIEiJ_G0027451)	Tmem150c (MGP_CAROLIEiJ_G0027450)
Shrew mouse	MODERN SPECIES	4	Spp1 (MGP_PahariEiJ_G0017258)	Mepe (MGP_PahariEiJ_G0017257)	Ibsp (MGP_PahariEiJ_G0017256)	Dmp1 (MGP_PahariEiJ_G0017255)	Dspp (MGP_PahariEiJ_G0017254)	Sparcl1 (MGP_PahariEiJ_G0017253)	Gm17660 (MGP_PahariEiJ_G0017252)	Nudt9 (MGP_PahariEiJ_G0017251)	MGP_PahariEiJ_G0017250	Hsd17b13 (MGP_PahariEiJ_G0017249)	Klhl8 (MGP_PahariEiJ_G0017248)	Aff1 (MGP_PahariEiJ_G0017247)	1700016H13Rik (MGP_PahariEiJ_G0017246)	Slc10a6 (MGP_PahariEiJ_G0017245)	Ptpn13 (MGP_PahariEiJ_G0017244) #21	Mapk10 (MGP_PahariEiJ_G0017243) #22	Arhgap24 (MGP_PahariEiJ_G0017242) #23	MGP_PahariEiJ_G0017241 ##24	Cds1 (MGP_PahariEiJ_G0017240) #26	Nkx6-1 (MGP_PahariEiJ_G0017239) #27	Gpat3 (MGP_PahariEiJ_G0017238)	Abraxas1 (MGP_PahariEiJ_G0017237)	Mrps18c (MGP_PahariEiJ_G0017236)	Helq (MGP_PahariEiJ_G0017235)	Hpse (MGP_PahariEiJ_G0017234)	Coq2 (MGP_PahariEiJ_G0017233)	Plac8 (MGP_PahariEiJ_G0017232)	Cops4 (MGP_PahariEiJ_G0017231)	Lin54 (MGP_PahariEiJ_G0017230)	Sec31a (MGP_PahariEiJ_G0017229)	Tmem150c (MGP_PahariEiJ_G0017228)
Rat	MODERN SPECIES	5	Ibsp (ENSRNOG00000002158)	Dmp1 (ENSRNOG00000002167)	Dspp (ENSRNOG00000002168)	Sparcl1 (ENSRNOG00000015093)	Scpppq1 (ENSRNOG00000050047)	Nudt9 (ENSRNOG00000002186)	Hsd17b11 (ENSRNOG00000002210)	Hsd17b13 (ENSRNOG00000002212)	Klhl8 (ENSRNOG00000002214)	ENSRNOG00000066604	Aff1 (ENSRNOG00000002232)	Aff1-as1 (ENSRNOG00000060245)	Slc10a6 (ENSRNOG00000002057)	Ptpn13 (ENSRNOG00000002061) #21	Ndufb4l1 (ENSRNOG00000034289)	Mapk10 (ENSRNOG00000002079) #22	LOC120096563 (ENSRNOG00000050982)	ENSRNOG00000068459	Arhgap24 (ENSRNOG00000056944) #23	Wdfy3 (ENSRNOG00000061121) #24	Cds1 (ENSRNOG00000002142) #26	Nkx6-1 (ENSRNOG00000002149) #27	Gpat3 (ENSRNOG00000002159)	Mrps18c (ENSRNOG00000002178)	Abraxas1 (ENSRNOG00000002165)	Helq (ENSRNOG00000002181)	ENSRNOG00000071057	Hpse (ENSRNOG00000002188)	ENSRNOG00000070232	Coq2 (ENSRNOG00000002194)	LOC100363472 (ENSRNOG00000002200)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1601				Dmp1 (ENSNGAG00000009719)	Dspp (ENSNGAG00000012207)	Sparcl1 (ENSNGAG00000013980)	Gm17660 (ENSNGAG00000017913)	Nudt9 (ENSNGAG00000019950)	Hsd17b11 (ENSNGAG00000006813)	Hsd17b13 (ENSNGAG00000011798)	ENSNGAG00000018962	ENSNGAG00000014096	1700016H13Rik (ENSNGAG00000019259)	Slc10a6 (ENSNGAG00000000716)	Ptpn13 (ENSNGAG00000011185) #21	Mapk10 (ENSNGAG00000009045) #22	Arhgap24 (ENSNGAG00000000035) #23	ENSNGAG00000017344	Wdfy3 (ENSNGAG00000010212) #24	Cds1 (ENSNGAG00000006898) #26	ENSNGAG00000012142	ENSNGAG00000012409	Nkx6-1 (ENSNGAG00000003700) #27	ENSNGAG00000000196	ENSNGAG00000002747	Abraxas1 (ENSNGAG00000013249)	Mrps18c (ENSNGAG00000015980)	Helq (ENSNGAG00000013230)
Lesser Egyptian jerboa	MODERN SPECIES	85	Pkd2 (ENSJJAG00000023331)	Spp1 (ENSJJAG00000018568)	Ibsp (ENSJJAG00000000975)	Dmp1 (ENSJJAG00000014935)	ENSJJAG00000009966	Sparcl1 (ENSJJAG00000000660)	Gm17660 (ENSJJAG00000010984)	Nudt9 (ENSJJAG00000011040)	Hsd17b11 (ENSJJAG00000017142)	Hsd17b13 (ENSJJAG00000006835)	ENSJJAG00000011705	Aff1 (ENSJJAG00000022877)	1700016H13Rik (ENSJJAG00000007723)	Slc10a6 (ENSJJAG00000011681)	Ptpn13 (ENSJJAG00000011075) #21	Mapk10 (ENSJJAG00000022409) #22	Arhgap24 (ENSJJAG00000013242) #23	ENSJJAG00000016275	Wdfy3 (ENSJJAG00000016637) #24	Cds1 (ENSJJAG00000019458) #26	ENSJJAG00000008039	Nkx6-1 (ENSJJAG00000021951) #27
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Suina	ANCESTRAL SPECIES	22	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Chacoan peccary	MODERN SPECIES	142	MEPE (ENSCWAG00000018384)	IBSP (ENSCWAG00000018436)	DMP1 (ENSCWAG00000018475)	ENSCWAG00000018555	SPARCL1 (ENSCWAG00000018606)	NUDT9 (ENSCWAG00000018721)	HSD17B11 (ENSCWAG00000018762)	HSD17B13 (ENSCWAG00000018808)	KLHL8 (ENSCWAG00000018874)	AFF1 (ENSCWAG00000019010)	ENSCWAG00000020279	C4orf36 (ENSCWAG00000020284)	ENSCWAG00000020289	SLC10A6 (ENSCWAG00000020294)	PTPN13 (ENSCWAG00000007867) #21	MAPK10 (ENSCWAG00000008717) #22	ARHGAP24 (ENSCWAG00000009694) #23	ENSCWAG00000009954	WDFY3 (ENSCWAG00000010017) #24	CDS1 (ENSCWAG00000010940) #26	NKX6-1 (ENSCWAG00000011063) #27	GPAT3 (ENSCWAG00000011111)	ABRAXAS1 (ENSCWAG00000011227)	MRPS18C (ENSCWAG00000011387)	HELQ (ENSCWAG00000011518)	HPSE (ENSCWAG00000011728)	COQ2 (ENSCWAG00000011816)	ENSCWAG00000011843	ENSCWAG00000011874	COPS4 (ENSCWAG00000011915)	LIN54 (ENSCWAG00000011977)
Pig	MODERN SPECIES	16	SPP1 (ENSSSCG00000009216)	MEPE (ENSSSCG00000028730)	IBSP (ENSSSCG00000009219)	DMP1 (ENSSSCG00000009220)	ENSSSCG00000009221	SPARCL1 (ENSSSCG00000009222)	NUDT9 (ENSSSCG00000053724)	HSD17B11 (ENSSSCG00000009225)	HSD17B13 (ENSSSCG00000057393)	KLHL8 (ENSSSCG00000009226)	AFF1 (ENSSSCG00000023593)	ENSSSCG00000043871	C4orf36 (ENSSSCG00000032190)	SLC10A6 (ENSSSCG00000028952)	PTPN13 (ENSSSCG00000026655) #21	MAPK10 (ENSSSCG00000009228) #22	ENSSSCG00000058771	ARHGAP24 (ENSSSCG00000009229) #23	WDFY3 (ENSSSCG00000009230) #24	CDS1 (ENSSSCG00000009231) #26	NKX6-1 (ENSSSCG00000009232) #27	GPAT3 (ENSSSCG00000009233)	ABRAXAS1 (ENSSSCG00000009234)	MRPS18C (ENSSSCG00000038042)	HELQ (ENSSSCG00000009236)	ENSSSCG00000051849	HPSE (ENSSSCG00000009237)	COQ2 (ENSSSCG00000009238)	ENSSSCG00000009239	ENSSSCG00000009240	COPS4 (ENSSSCG00000009241)
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Camelidae	ANCESTRAL SPECIES	44	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Arabian camel	MODERN SPECIES	11	SPP1 (ENSCDRG00005007782)	MEPE (ENSCDRG00005007644)	IBSP (ENSCDRG00005007598)	DMP1 (ENSCDRG00005007545)	ENSCDRG00005007492	SPARCL1 (ENSCDRG00005007410)	NUDT9 (ENSCDRG00005007374)	HSD17B11 (ENSCDRG00005007280)	HSD17B13 (ENSCDRG00005007167)	KLHL8 (ENSCDRG00005006939)	AFF1 (ENSCDRG00005006432)	C4orf36 (ENSCDRG00005006366)	SLC10A6 (ENSCDRG00005006339)	ENSCDRG00005006322	PTPN13 (ENSCDRG00005005955) #21	MAPK10 (ENSCDRG00005005394) #22	ARHGAP24 (ENSCDRG00005005261) #23	ENSCDRG00005005241	WDFY3 (ENSCDRG00005004624) #24	CDS1 (ENSCDRG00005004562) #26	ENSCDRG00005004541 #27	ENSCDRG00005004525	GPAT3 (ENSCDRG00005004508)	ABRAXAS1 (ENSCDRG00005004488)	MRPS18C (ENSCDRG00005004460)	HELQ (ENSCDRG00005004047)	HPSE (ENSCDRG00005003833)	COQ2 (ENSCDRG00005003800)	ENSCDRG00005003781	ENSCDRG00005003768	PLAC8 (ENSCDRG00005003743)
Alpaca	MODERN SPECIES	705																MAPK10 (ENSVPAG00000002744) #22	ARHGAP24 (ENSVPAG00000002743) #23
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Cetacea	ANCESTRAL SPECIES	12	ENSGT00390000009194.b	ENSGT00940000157158.d	ENSGT00670000098059.k.b	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT00940000162839.a	ENSGT00940000155329.a	ENSGT00990000211293	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.f	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000157158.d	ENSGT00670000098059.k.b	ENSGT00940000158012	ENSGT00940000156434	ENSGT00390000013749	ENSGT00940000162839.a	ENSGT00940000155329.a.m	ENSGT00990000211293.a	ENSGT00940000157376.ub	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.f	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Odontoceti_a	ANCESTRAL SPECIES	23										ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.f.a	ENSGT01050000244986.b.b.b.a	ENSGT00940000153064.b.d.g.a.a.b.b	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b
Dolphin	MODERN SPECIES	593																MAPK10 (ENSTTRG00000016082) #22	ARHGAP24 (ENSTTRG00000016079) #23
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00390000009194.b	ENSGT00940000157158.d	ENSGT00670000098059.k.b	ENSGT00940000158012.b	ENSGT00940000156434	ENSGT00390000013749	ENSGT00940000162839.a	ENSGT00940000155329.a.m	ENSGT00990000211293.a	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b.g	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00730000111184.b	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.c	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.f.a	ENSGT01050000244986.b.b.b.a.c.b.a.a.a.a.b	ENSGT00940000153064.b.d.g.a.a.b.b	ENSGT00940000165276	ENSGT00940000157329
Vaquita	MODERN SPECIES	16	ENSPSNG00000005833	CPE (ENSPSNG00000005768)	MSMO1 (ENSPSNG00000005743)	KLHL2 (ENSPSNG00000005586)	ENSPSNG00000005531	TMEM192 (ENSPSNG00000005518)	ENSPSNG00000005502	ENSPSNG00000005484	ENSPSNG00000005468	HSD17B13 (ENSPSNG00000005413)	ENSPSNG00000005321	AFF1 (ENSPSNG00000005255)	C4orf36 (ENSPSNG00000005211)	SLC10A6 (ENSPSNG00000005183)	PTPN13 (ENSPSNG00000004803) #21	MAPK10 (ENSPSNG00000003815) #22	ARHGAP24 (ENSPSNG00000003397) #23	WDFY3 (ENSPSNG00000003315) #24	CDS1 (ENSPSNG00000003244) #26	ENSPSNG00000003212	NKX6-1 (ENSPSNG00000003189) #27	GPAT3 (ENSPSNG00000003169)	ABRAXAS1 (ENSPSNG00000003150)	ENSPSNG00000003127	HELQ (ENSPSNG00000003097)	HPSE (ENSPSNG00000003060)	ENSPSNG00000003043	PLAC8 (ENSPSNG00000003027)	COPS4 (ENSPSNG00000002984)	LIN54 (ENSPSNG00000002941)	THAP9 (ENSPSNG00000002893)
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000009194.b	ENSGT00940000157158.d	ENSGT00670000098059.k.b	ENSGT00940000158012.b	ENSGT00940000156434	ENSGT00390000013749	ENSGT00940000162839.a	ENSGT00940000155329.a.m	ENSGT00990000211293.a	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b.g	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00730000111184.b	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.c	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.f.a	ENSGT01050000244986.b.b.b.a.c.b.a.a.a.a.b.c	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b
Narwhal	MODERN SPECIES	307	MSMO1 (ENSMMNG00015020022)	KLHL2 (ENSMMNG00015020081)	TMEM192 (ENSMMNG00015020171)	ENSMMNG00015020185	ENSMMNG00015020208	ENSMMNG00015020225	ENSMMNG00015020235	ENSMMNG00015020247	HSD17B13 (ENSMMNG00015020266)	ENSMMNG00015020309	AFF1 (ENSMMNG00015020355)	C4orf36 (ENSMMNG00015020430)	ENSMMNG00015020444	PTPN13 (ENSMMNG00015020602) #21	ENSMMNG00015020980	MAPK10 (ENSMMNG00015021086) #22	ENSMMNG00015021212	ARHGAP24 (ENSMMNG00015021223) #23	WDFY3 (ENSMMNG00015021267) #24	CDS1 (ENSMMNG00015021330) #26	MAP9 (ENSMMNG00015021363)	NKX6-1 (ENSMMNG00015021370) #27	GPAT3 (ENSMMNG00015021395)	ABRAXAS1 (ENSMMNG00015021418)	ENSMMNG00015021433	HELQ (ENSMMNG00015021461)	HPSE (ENSMMNG00015015014)	ENSMMNG00015015039	ENSMMNG00015015052	PLAC8 (ENSMMNG00015015064)	COPS4 (ENSMMNG00015015091)
Beluga whale	MODERN SPECIES	82	TLL1 (ENSDLEG00000017176)	ENSDLEG00000017161	ENSDLEG00000017146	CPE (ENSDLEG00000017126)	MSMO1 (ENSDLEG00000017106)	KLHL2 (ENSDLEG00000017065)	ENSDLEG00000017050	TMEM192 (ENSDLEG00000017043)	ENSDLEG00000017033	HSD17B13 (ENSDLEG00000017020)	AFF1 (ENSDLEG00000016951)	C4orf36 (ENSDLEG00000016944)	SLC10A6 (ENSDLEG00000016941)	ENSDLEG00000016931	PTPN13 (ENSDLEG00000016284) #21	MAPK10 (ENSDLEG00000014759) #22	ARHGAP24 (ENSDLEG00000014621) #23	ENSDLEG00000014603	WDFY3 (ENSDLEG00000013480) #24	CDS1 (ENSDLEG00000013256) #26	MAP9 (ENSDLEG00000013197)	NPY2R (ENSDLEG00000013166)
Sperm whale	MODERN SPECIES	18	GUF1 (ENSPCTG00005000657)	ENSPCTG00005000696	TLL1 (ENSPCTG00005000720)	CPE (ENSPCTG00005000793)	MSMO1 (ENSPCTG00005000817)	KLHL2 (ENSPCTG00005000844)	TMEM192 (ENSPCTG00005000934)	ENSPCTG00005000991	HSD17B13 (ENSPCTG00005001010)	KLHL8 (ENSPCTG00005001049)	AFF1 (ENSPCTG00005001103)	C7H4orf36 (ENSPCTG00005001168)	SLC10A6 (ENSPCTG00005001180)	PTPN13 (ENSPCTG00005001290) #21	ENSPCTG00005001550	MAPK10 (ENSPCTG00005001640) #22	ARHGAP24 (ENSPCTG00005001841) #23	ENSPCTG00005001889	ENSPCTG00005001903	AMTN (ENSPCTG00005001915)	AMBN (ENSPCTG00005001932)	ENAM (ENSPCTG00005001966)	JCHAIN (ENSPCTG00005001989)	RUFY3 (ENSPCTG00005002063)	GRSF1 (ENSPCTG00005002336)	MOB1B (ENSPCTG00005002357)	DCK (ENSPCTG00005002373)	SLC4A4 (ENSPCTG00005002476)	GC (ENSPCTG00005002928)	NPFFR2 (ENSPCTG00005002984)	ADAMTS3 (ENSPCTG00005003003)
Blue whale	MODERN SPECIES	16	CPE (ENSBMSG00010001524)	ENSBMSG00010001535	MSMO1 (ENSBMSG00010001541)	KLHL2 (ENSBMSG00010001582)	TMEM192 (ENSBMSG00010001694)	ENSBMSG00010001708	ENSBMSG00010001734	ENSBMSG00010001779	ENSBMSG00010001790	HSD17B13 (ENSBMSG00010001808)	KLHL8 (ENSBMSG00010001848)	AFF1 (ENSBMSG00010001892)	C4orf36 (ENSBMSG00010001908)	SLC10A6 (ENSBMSG00010001920)	PTPN13 (ENSBMSG00010001970) #21	MAPK10 (ENSBMSG00010002157) #22	ARHGAP24 (ENSBMSG00010002391) #23	ENSBMSG00010002445	ENSBMSG00010002461	ENSBMSG00010002473 #24	CDS1 (ENSBMSG00010002491) #26	NKX6-1 (ENSBMSG00010002515) #27	GPAT3 (ENSBMSG00010002532)	ABRAXAS1 (ENSBMSG00010002554)	MRPS18C (ENSBMSG00010002580)	HELQ (ENSBMSG00010002636)	HPSE (ENSBMSG00010002695)	COQ2 (ENSBMSG00010002720)	ENSBMSG00010002728	PLAC8 (ENSBMSG00010002739)	COPS4 (ENSBMSG00010002752)
Pecora	ANCESTRAL SPECIES	15	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT01030000234638.b.a.b.q.a.b	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Yarkand deer	MODERN SPECIES	29	ENSCHYG00000015331	SPARCL1 (ENSCHYG00000015173)	ENSCHYG00000014882	ENSCHYG00000014859	HSD17B11 (ENSCHYG00000014635)	HSD17B13 (ENSCHYG00000014556)	KLHL8 (ENSCHYG00000014019)	AFF1 (ENSCHYG00000013429)	C4orf36 (ENSCHYG00000013363)	SLC10A6 (ENSCHYG00000013255)	PTPN13 (ENSCHYG00000011843) #21	ENSCHYG00000011708	ENSCHYG00000011686	ENSCHYG00000011591	ENSCHYG00000011569	MAPK10 (ENSCHYG00000010214) #22	ARHGAP24 (ENSCHYG00000009997) #23	WDFY3 (ENSCHYG00000009657) #24	CDS1 (ENSCHYG00000009516) #26	NKX6-1 (ENSCHYG00000009447) #27	ENSCHYG00000009381	GPAT3 (ENSCHYG00000009277)	ABRAXAS1 (ENSCHYG00000009158)	ENSCHYG00000009068	HELQ (ENSCHYG00000008723)	HPSE (ENSCHYG00000008412)	COQ2 (ENSCHYG00000008350)	ENSCHYG00000008321	ENSCHYG00000008307	PLAC8 (ENSCHYG00000008274)	COPS4 (ENSCHYG00000008113)
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT01030000234638.b.a.b.q.a.b	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Siberian musk deer	MODERN SPECIES	1273	JAKMIP1 (ENSMMSG00000014962)	WFS1 (ENSMMSG00000015467)	PPP2R2C (ENSMMSG00000015500)	ENSMMSG00000015548	DMP1 (ENSMMSG00000015722)	ENSMMSG00000015791	SPARCL1 (ENSMMSG00000015840)	NUDT9 (ENSMMSG00000015898)	HSD17B11 (ENSMMSG00000015946)	HSD17B13 (ENSMMSG00000016012)	KLHL8 (ENSMMSG00000016116)	AFF1 (ENSMMSG00000016294)	C4orf36 (ENSMMSG00000016405)	SLC10A6 (ENSMMSG00000016456)	PTPN13 (ENSMMSG00000016540) #21	MAPK10 (ENSMMSG00000016767) #22	ARHGAP24 (ENSMMSG00000017490) #23	WDFY3 (ENSMMSG00000017648) #24	CDS1 (ENSMMSG00000018080) #26	NKX6-1 (ENSMMSG00000018122) #27
Bovidae	ANCESTRAL SPECIES	18	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT01030000234638.b.a.b.q.a.b	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00390000006247.e.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Bovinae	ANCESTRAL SPECIES	15	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT01030000234638.b.a.b.q.a.b	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00390000006247.e.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Bos	ANCESTRAL SPECIES	15	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n #21	ENSGT00550000075088.a.a.ob.b	ENSGT00390000006247.e.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Bos_a	ANCESTRAL SPECIES	21	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n #21	ENSGT00550000075088.a.a.ob.b	ENSGT00390000006247.e.a	ENSGT00940000154222.d.b.d.g.a.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00390000002398.f.b.b	ENSGT00390000005197.a	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b
Wild yak	MODERN SPECIES	2139										C4orf36 (ENSBMUG00000022376)	SLC10A6 (ENSBMUG00000022366)	PTPN13 (ENSBMUG00000022207) #21	ENSBMUG00000021951	ENSBMUG00000021948	ENSBMUG00000021916	MAPK10 (ENSBMUG00000021832) #22
Domestic yak	MODERN SPECIES	25	ENSBGRG00000013414	ENSBGRG00000013725	DMP1 (ENSBGRG00000014603)	ENSBGRG00000014783	SPARCL1 (ENSBGRG00000014840)	NUDT9 (ENSBGRG00000014966)	HSD17B11 (ENSBGRG00000015134)	ENSBGRG00000015430	KLHL8 (ENSBGRG00000015486)	AFF1 (ENSBGRG00000015861)	C4orf36 (ENSBGRG00000016444)	SLC10A6 (ENSBGRG00000016493)	PTPN13 (ENSBGRG00000016575) #21	ENSBGRG00000016870	ENSBGRG00000016888	MAPK10 (ENSBGRG00000017007) #22	ARHGAP24 (ENSBGRG00000018148) #23	ENSBGRG00000018396	WDFY3 (ENSBGRG00000018444) #24	ENSBGRG00000020638	CDS1 (ENSBGRG00000020658) #26	NKX6-1 (ENSBGRG00000020754) #27	ENSBGRG00000020797	ABRAXAS1 (ENSBGRG00000020830)	MRPS18C (ENSBGRG00000020952)	ENSBGRG00000021080	ENSBGRG00000021100	HPSE (ENSBGRG00000021245)	COQ2 (ENSBGRG00000021631)	ENSBGRG00000021702	ENSBGRG00000021746
Bos_b	ANCESTRAL SPECIES	14	ENSGT01030000234638.b.a.b.q.a.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT01100000263481.n.a.b.a.b.b.a.a.a.b.a.a.a.b.b	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b.n.a #21	ENSGT00550000075088.a.a.ob.b	ENSGT00390000006247.e.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Cow	MODERN SPECIES	25	DSPP (ENSBTAG00000045714)	SPARCL1 (ENSBTAG00000004094)	NUDT9 (ENSBTAG00000011354)	ENSBTAG00000052418	HSD17B11 (ENSBTAG00000006307)	HSD17B13 (ENSBTAG00000031679)	ENSBTAG00000047432	KLHL8 (ENSBTAG00000002455)	AFF1 (ENSBTAG00000018488)	C4orf36 (ENSBTAG00000051915)	ENSBTAG00000050963	ENSBTAG00000047514	PTPN13 (ENSBTAG00000014947) #21	ENSBTAG00000050276	ENSBTAG00000045839	MAPK10 (ENSBTAG00000020048) #22	ARHGAP24 (ENSBTAG00000003959) #23	WDFY3 (ENSBTAG00000013495) #24	CDS1 (ENSBTAG00000045787) #26	NKX6-1 (ENSBTAG00000002518) #27	GPAT3 (ENSBTAG00000017592)	ABRAXAS1 (ENSBTAG00000014076)	MRPS18C (ENSBTAG00000018155)	HELQ (ENSBTAG00000018151)	HPSE (ENSBTAG00000005745)	ENSBTAG00000046700	COQ2 (ENSBTAG00000005744)	PLAC8A (ENSBTAG00000009849)	PLAC8B (ENSBTAG00000031750)	COPS4 (ENSBTAG00000006950)	LIN54 (ENSBTAG00000010546)
Hybrid Bos Indicus	MODERN SPECIES	25	SPARCL1 (ENSBIXG00005007329)	NUDT9 (ENSBIXG00005016830)	ENSBIXG00005016839	HSD17B11 (ENSBIXG00005005731)	ENSBIXG00005016946	KLHL8 (ENSBIXG00005017118)	AFF1 (ENSBIXG00005017161)	C4orf36 (ENSBIXG00005017196)	ENSBIXG00005017214	ENSBIXG00005002799	SLC10A6 (ENSBIXG00005017247)	ENSBIXG00005017276	ENSBIXG00005017372 #21	ENSBIXG00005002829	ENSBIXG00005005513	MAPK10 (ENSBIXG00005018360) #22	ARHGAP24 (ENSBIXG00005018506) #23	WDFY3 (ENSBIXG00005018815) #24	CDS1 (ENSBIXG00005000063) #26	NKX6-1 (ENSBIXG00005003082) #27	ENSBIXG00005018974	ABRAXAS1 (ENSBIXG00005019067)	ENSBIXG00005019139	HELQ (ENSBIXG00005019158)	ENSBIXG00005019178	HPSE (ENSBIXG00005019430)	ENSBIXG00005003170	COQ2 (ENSBIXG00005019522)	ENSBIXG00005019535	ENSBIXG00005019584	COPS4 (ENSBIXG00005019645)
American bison	MODERN SPECIES	3145															ENSBBBG00000019073	MAPK10 (ENSBBBG00000021242) #22	ENSBBBG00000021405	ARHGAP24 (ENSBBBG00000021449) #23	WDFY3 (ENSBBBG00000021530) #24	CDS1 (ENSBBBG00000021561) #26	NKX6-1 (ENSBBBG00000021568) #27	GPAT3 (ENSBBBG00000021607)	ABRAXAS1 (ENSBBBG00000021618)	ENSBBBG00000007196	HELQ (ENSBBBG00000005762)	HPSE (ENSBBBG00000021800)	ENSBBBG00000021819	COQ2 (ENSBBBG00000021841)	ENSBBBG00000005784	PLAC8 (ENSBBBG00000021864)	COPS4 (ENSBBBG00000021925)
Caprinae	ANCESTRAL SPECIES	13	ENSGT00390000016928	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT01030000234638.b.a.b.q.a.b.a	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00390000006247.e.a	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000153112.D.c.a	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791.a.a.a	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B.g	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881
Rambouillet Sheep	MODERN SPECIES	22	WFS1 (ENSOARG00020023129)	PPP2R2C (ENSOARG00020023090)	ENSOARG00020022932	ENSOARG00020022892	DMP1 (ENSOARG00020022854)	DSPP (ENSOARG00020022784)	SPARCL1 (ENSOARG00020022579)	NUDT9 (ENSOARG00020022482)	ENSOARG00020022244	ENSOARG00020021968	AFF1 (ENSOARG00020021386)	C4orf36 (ENSOARG00020021226)	SLC10A6 (ENSOARG00020021292)	PTPN13 (ENSOARG00020019325) #21	ENSOARG00020019244	MAPK10 (ENSOARG00020018223) #22	ARHGAP24 (ENSOARG00020017927) #23	ENSOARG00020017855	WDFY3 (ENSOARG00020015498) #24	CDS1 (ENSOARG00020015132) #26	NKX6-1 (ENSOARG00020015056) #27	GPAT3 (ENSOARG00020014882)	ABRAXAS1 (ENSOARG00020014754)	MRPS18C (ENSOARG00020014621)	HELQ (ENSOARG00020014284)	HPSE (ENSOARG00020013610)	COQ2 (ENSOARG00020013352)	ENSOARG00020013289	PLAC8 (ENSOARG00020013230)	COPS4 (ENSOARG00020013112)	LIN54 (ENSOARG00020012720)
Goat	MODERN SPECIES	25	DMP1 (ENSCHIG00000024137)	DSPP (ENSCHIG00000016631)	SPARCL1 (ENSCHIG00000007139)	NUDT9 (ENSCHIG00000020346)	HSD17B11 (ENSCHIG00000011780)	HSD17B13 (ENSCHIG00000020775)	KLHL8 (ENSCHIG00000015495)	AFF1 (ENSCHIG00000008450)	C4orf36 (ENSCHIG00000020322)	SLC10A6 (ENSCHIG00000014126)	ENSCHIG00000001076	PTPN13 (ENSCHIG00000021006) #21	ENSCHIG00000013818	ENSCHIG00000003527	ENSCHIG00000018060	MAPK10 (ENSCHIG00000012374) #22	ARHGAP24 (ENSCHIG00000022792) #23	ENSCHIG00000024192	ENSCHIG00000012928	WDFY3 (ENSCHIG00000023077) #24	CDS1 (ENSCHIG00000012002) #26	NKX6-1 (ENSCHIG00000023774) #27	GPAT3 (ENSCHIG00000025469)	ABRAXAS1 (ENSCHIG00000016630)	ENSCHIG00000004461	HELQ (ENSCHIG00000020128)	HPSE (ENSCHIG00000009216)	ENSCHIG00000021767	ENSCHIG00000012923	PLAC8 (ENSCHIG00000022219)	COPS4 (ENSCHIG00000014728)
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Laurasiatheria_c	ANCESTRAL SPECIES	8	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Chiroptera	ANCESTRAL SPECIES	9	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Microchiroptera	ANCESTRAL SPECIES	10	ENSGT00940000160729	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Greater horseshoe bat	MODERN SPECIES	23	PKD2 (ENSRFEG00010004160)	SPP1 (ENSRFEG00010004130)	MEPE (ENSRFEG00010004107)	IBSP (ENSRFEG00010004083)	DMP1 (ENSRFEG00010004052)	DSPP (ENSRFEG00010004032)	SPARCL1 (ENSRFEG00010004013)	NUDT9 (ENSRFEG00010003996)	HSD17B11 (ENSRFEG00010003976)	KLHL8 (ENSRFEG00010003941)	AFF1 (ENSRFEG00010003846)	C4orf36 (ENSRFEG00010003812)	SLC10A6 (ENSRFEG00010003798)	PTPN13 (ENSRFEG00010003712) #21	ENSRFEG00010003614	MAPK10 (ENSRFEG00010003450) #22	ENSRFEG00010003378	ARHGAP24 (ENSRFEG00010003345) #23	ENSRFEG00010003308	WDFY3 (ENSRFEG00010003045) #24	CDS1 (ENSRFEG00010002893) #26	NKX6-1 (ENSRFEG00010002866) #27	ENSRFEG00010002849	ENSRFEG00010002829	GPAT3 (ENSRFEG00010002804)	ABRAXAS1 (ENSRFEG00010002770)	ENSRFEG00010002735	HELQ (ENSRFEG00010002668)	HPSE (ENSRFEG00010002595)	COQ2 (ENSRFEG00010002560)	ENSRFEG00010002549
Microbat	MODERN SPECIES	949	ENSMLUG00000028011	PKD2 (ENSMLUG00000010300)	SPP1 (ENSMLUG00000010286)	MEPE (ENSMLUG00000010133)	IBSP (ENSMLUG00000010116)	DMP1 (ENSMLUG00000005713)	ENSMLUG00000029911	DSPP (ENSMLUG00000022580)	SPARCL1 (ENSMLUG00000007646)	NUDT9 (ENSMLUG00000007624)	HSD17B11 (ENSMLUG00000007606)	KLHL8 (ENSMLUG00000016977)	AFF1 (ENSMLUG00000000293)	SLC10A6 (ENSMLUG00000002142)	PTPN13 (ENSMLUG00000002103) #21	MAPK10 (ENSMLUG00000014822) #22	ARHGAP24 (ENSMLUG00000014817) #23	WDFY3 (ENSMLUG00000011620) #24	CDS1 (ENSMLUG00000011596) #26	NKX6-1 (ENSMLUG00000012584) #27	ENSMLUG00000023867	GPAT3 (ENSMLUG00000017070)	ABRAXAS1 (ENSMLUG00000017061)	MRPS18C (ENSMLUG00000017057)	HELQ (ENSMLUG00000017053)	HPSE (ENSMLUG00000015271)	COQ2 (ENSMLUG00000015267)	ENSMLUG00000003019	ENSMLUG00000028471	COPS4 (ENSMLUG00000003011)	ENSMLUG00000008504
Megabat	MODERN SPECIES	859																MAPK10 (ENSPVAG00000002803) #22	ARHGAP24 (ENSPVAG00000002801) #23
Equus	ANCESTRAL SPECIES	12	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Donkey	MODERN SPECIES	22	MEPE (ENSEASG00005012732)	IBSP (ENSEASG00005012734)	DMP1 (ENSEASG00005012738)	DSPP (ENSEASG00005012740)	SPARCL1 (ENSEASG00005012743)	NUDT9 (ENSEASG00005012745)	HSD17B11 (ENSEASG00005012747)	HSD17B13 (ENSEASG00005012750)	ENSEASG00005012752	KLHL8 (ENSEASG00005012755)	AFF1 (ENSEASG00005012760)	C4orf36 (ENSEASG00005038157)	SLC10A6 (ENSEASG00005029221)	PTPN13 (ENSEASG00005012776) #21	ENSEASG00005034628	MAPK10 (ENSEASG00005012811) #22	ARHGAP24 (ENSEASG00005013101) #23	WDFY3 (ENSEASG00005013124) #24	CDS1 (ENSEASG00005013203) #26	NKX6-1 (ENSEASG00005031030) #27	ENSEASG00005031620	GPAT3 (ENSEASG00005013215)	ABRAXAS1 (ENSEASG00005030592)	ENSEASG00005013234	HELQ (ENSEASG00005013248)	HPSE (ENSEASG00005013314)	COQ2 (ENSEASG00005013339)	ENSEASG00005013341	ENSEASG00005038183	PLAC8 (ENSEASG00005013345)	COPS4 (ENSEASG00005013351)
Horse	MODERN SPECIES	22	IBSP (ENSECAG00000024478)	DMP1 (ENSECAG00000004158)	DSPP (ENSECAG00000007608)	SPARCL1 (ENSECAG00000009280)	NUDT9 (ENSECAG00000019556)	HSD17B11 (ENSECAG00000008173)	ENSECAG00000049673	ENSECAG00000053823	HSD17B13 (ENSECAG00000012765)	KLHL8 (ENSECAG00000017829)	ENSECAG00000050121	AFF1 (ENSECAG00000003619)	C3H4orf36 (ENSECAG00000012119)	SLC10A6 (ENSECAG00000012685)	PTPN13 (ENSECAG00000015663) #21	MAPK10 (ENSECAG00000017280) #22	ARHGAP24 (ENSECAG00000012825) #23	ENSECAG00000033662 #23	ENSECAG00000046931	WDFY3 (ENSECAG00000016702) #24	CDS1 (ENSECAG00000011962) #26	NKX6-1 (ENSECAG00000021703) #27	ENSECAG00000023481	ENSECAG00000002057	GPAT3 (ENSECAG00000023828)	ABRAXAS1 (ENSECAG00000055802)	MRPS18C (ENSECAG00000020387)	HELQ (ENSECAG00000020717)	HPSE (ENSECAG00000023599)	COQ2 (ENSECAG00000012542)	PLAC8A (ENSECAG00000014585)
Carnivora	ANCESTRAL SPECIES	5	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Felidae	ANCESTRAL SPECIES	4	ENSGT00940000159025	ENSGT00390000002509.c	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Panthera	ANCESTRAL SPECIES	5	ENSGT00390000002509.c	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000009819.a.b.a.a.a.a.a	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00390000002509.c	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000009819.a.b.a.a.a.a.a	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
leopard	MODERN SPECIES	2	PKD2 (ENSPPRG00000007565)	ENSPPRG00000006977	MEPE (ENSPPRG00000004532)	IBSP (ENSPPRG00000003951)	DMP1 (ENSPPRG00000003749)	DSPP (ENSPPRG00000003345)	SPARCL1 (ENSPPRG00000002980)	NUDT9 (ENSPPRG00000001877)	HSD17B11 (ENSPPRG00000001352)	HSD17B13 (ENSPPRG00000000914)	KLHL8 (ENSPPRG00000022636)	AFF1 (ENSPPRG00000023590)	C4orf36 (ENSPPRG00000020551)	SLC10A6 (ENSPPRG00000018990)	PTPN13 (ENSPPRG00000017293) #21	MAPK10 (ENSPPRG00000004716) #22	ENSPPRG00000003351	ARHGAP24 (ENSPPRG00000003142) #23	WDFY3 (ENSPPRG00000022861) #24	CDS1 (ENSPPRG00000014316) #26	NKX6-1 (ENSPPRG00000013390) #27	GPAT3 (ENSPPRG00000013201)	ABRAXAS1 (ENSPPRG00000012121)	ENSPPRG00000011504	MRPS18C (ENSPPRG00000011089)	HELQ (ENSPPRG00000010520)	HPSE (ENSPPRG00000008623)	COQ2 (ENSPPRG00000006603)	ENSPPRG00000006145	PLAC8 (ENSPPRG00000005643)	COPS4 (ENSPPRG00000004927)
lion	MODERN SPECIES	4	SPP1 (ENSPLOG00000006547)	MEPE (ENSPLOG00000006654)	IBSP (ENSPLOG00000006687)	DMP1 (ENSPLOG00000006728)	ENSPLOG00000006784	SPARCL1 (ENSPLOG00000006828)	NUDT9 (ENSPLOG00000006898)	HSD17B11 (ENSPLOG00000006951)	HSD17B13 (ENSPLOG00000006994)	KLHL8 (ENSPLOG00000007059)	AFF1 (ENSPLOG00000007207)	ENSPLOG00000007406	C4orf36 (ENSPLOG00000007423)	SLC10A6 (ENSPLOG00000007456)	PTPN13 (ENSPLOG00000007651) #21	MAPK10 (ENSPLOG00000008731) #22	ARHGAP24 (ENSPLOG00000009317) #23	WDFY3 (ENSPLOG00000009473) #24	CDS1 (ENSPLOG00000009762) #26	NKX6-1 (ENSPLOG00000009814) #27	GPAT3 (ENSPLOG00000009847)	ABRAXAS1 (ENSPLOG00000009906)	ENSPLOG00000009986	MRPS18C (ENSPLOG00000010023)	HELQ (ENSPLOG00000010078)	HPSE (ENSPLOG00000010262)	COQ2 (ENSPLOG00000010472)	ENSPLOG00000010500	PLAC8 (ENSPLOG00000010531)	COPS4 (ENSPLOG00000010576)	LIN54 (ENSPLOG00000010731)
Tiger	MODERN SPECIES	44	SPP1 (ENSPTIG00000021399)	MEPE (ENSPTIG00000021972)	IBSP (ENSPTIG00000022053)	DMP1 (ENSPTIG00000022087)	DSPP (ENSPTIG00000022109)	SPARCL1 (ENSPTIG00000001327)	NUDT9 (ENSPTIG00000006560)	HSD17B11 (ENSPTIG00000007742)	HSD17B13 (ENSPTIG00000009196)	KLHL8 (ENSPTIG00000010495)	AFF1 (ENSPTIG00000011838)	ENSPTIG00000015329	C4orf36 (ENSPTIG00000015620)	SLC10A6 (ENSPTIG00000016093)	PTPN13 (ENSPTIG00000016360) #21	MAPK10 (ENSPTIG00000019645) #22	ARHGAP24 (ENSPTIG00000005664) #23	WDFY3 (ENSPTIG00000008434) #24	CDS1 (ENSPTIG00000018182) #26	ENSPTIG00000018677 #27	GPAT3 (ENSPTIG00000018848)	ABRAXAS1 (ENSPTIG00000020808)	MRPS18C (ENSPTIG00000021242)	HELQ (ENSPTIG00000021394)	HPSE (ENSPTIG00000021909)	COQ2 (ENSPTIG00000005683)	ENSPTIG00000007169	PLAC8 (ENSPTIG00000007562)	COPS4 (ENSPTIG00000008611)	LIN54 (ENSPTIG00000009415)	THAP9 (ENSPTIG00000010295)
Cat	MODERN SPECIES	235	ABCG2 (ENSFCAG00000002841)	PKD2 (ENSFCAG00000002839)	SPP1 (ENSFCAG00000044995)	MEPE (ENSFCAG00000009103)	IBSP (ENSFCAG00000036214)	DMP1 (ENSFCAG00000046729)	DSPP (ENSFCAG00000025835)	SPARCL1 (ENSFCAG00000013900)	NUDT9 (ENSFCAG00000003315)	HSD17B11 (ENSFCAG00000030181)	KLHL8 (ENSFCAG00000013928)	AFF1 (ENSFCAG00000029806)	C4orf36 (ENSFCAG00000036309)	SLC10A6 (ENSFCAG00000031386)	PTPN13 (ENSFCAG00000018332) #21	MAPK10 (ENSFCAG00000002234) #22	ARHGAP24 (ENSFCAG00000028582) #23	ENSFCAG00000022178	WDFY3 (ENSFCAG00000002946) #24	CDS1 (ENSFCAG00000028459) #26	NKX6-1 (ENSFCAG00000028918) #27	GPAT3 (ENSFCAG00000019375)	ENSFCAG00000049574	ABRAXAS1 (ENSFCAG00000018503)	ENSFCAG00000036842	HELQ (ENSFCAG00000009921)	MRPS18C (ENSFCAG00000042464)	ENSFCAG00000032162	HPSE (ENSFCAG00000031098)	COQ2 (ENSFCAG00000014620)	ENSFCAG00000043039
Caniformia	ANCESTRAL SPECIES	7	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Ursidae	ANCESTRAL SPECIES	17	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Giant Panda	MODERN SPECIES	2	MEPE (ENSAMEG00000003176)	IBSP (ENSAMEG00000003185)	DMP1 (ENSAMEG00000003211)	DSPP (ENSAMEG00000030550)	SPARCL1 (ENSAMEG00000003222)	NUDT9 (ENSAMEG00000003244)	HSD17B11 (ENSAMEG00000003269)	HSD17B13 (ENSAMEG00000003284)	KLHL8 (ENSAMEG00000003314)	AFF1 (ENSAMEG00000003337)	C4orf36 (ENSAMEG00000029259)	SLC10A6 (ENSAMEG00000003408)	PTPN13 (ENSAMEG00000003426) #21	ENSAMEG00000020112	ENSAMEG00000024509	MAPK10 (ENSAMEG00000003514) #22	ARHGAP24 (ENSAMEG00000003558) #23	ENSAMEG00000029199	WDFY3 (ENSAMEG00000003579) #24	CDS1 (ENSAMEG00000003633) #26	NKX6-1 (ENSAMEG00000028116) #27	GPAT3 (ENSAMEG00000004856)	ABRAXAS1 (ENSAMEG00000023567)	MRPS18C (ENSAMEG00000026135)	HELQ (ENSAMEG00000004921)	HPSE (ENSAMEG00000004938)	COQ2 (ENSAMEG00000005006)	ENSAMEG00000005018	PLAC8 (ENSAMEG00000005020)	COPS4 (ENSAMEG00000005021)	LIN54 (ENSAMEG00000005042)
Ursus	ANCESTRAL SPECIES	78	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
American black bear	MODERN SPECIES	206																MAPK10 (ENSUAMG00000017893) #22	ARHGAP24 (ENSUAMG00000017895) #23	ENSUAMG00000017896
Polar bear	MODERN SPECIES	285			MEPE (ENSUMAG00000025453)	IBSP (ENSUMAG00000025452)	DMP1 (ENSUMAG00000025451)	DSPP (ENSUMAG00000025449)	SPARCL1 (ENSUMAG00000025448)	NUDT9 (ENSUMAG00000025447)	HSD17B11 (ENSUMAG00000025445)	HSD17B13 (ENSUMAG00000025444)	KLHL8 (ENSUMAG00000025441)	AFF1 (ENSUMAG00000025433)	C4orf36 (ENSUMAG00000025430)	SLC10A6 (ENSUMAG00000025429)	PTPN13 (ENSUMAG00000024943) #21	MAPK10 (ENSUMAG00000024932) #22	ENSUMAG00000024931	ARHGAP24 (ENSUMAG00000024930) #23	ENSUMAG00000024929
Mustelinae	ANCESTRAL SPECIES	50	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Ferret	MODERN SPECIES	214	ENSMPUG00000002193	PKD2 (ENSMPUG00000002232)	SPP1 (ENSMPUG00000002233)	MEPE (ENSMPUG00000002234)	IBSP (ENSMPUG00000002238)	DMP1 (ENSMPUG00000002241)	DSPP (ENSMPUG00000002243)	SPARCL1 (ENSMPUG00000002250)	NUDT9 (ENSMPUG00000002258)	HSD17B11 (ENSMPUG00000002261)	KLHL8 (ENSMPUG00000002266)	AFF1 (ENSMPUG00000002270)	C4orf36 (ENSMPUG00000002275)	SLC10A6 (ENSMPUG00000002278)	PTPN13 (ENSMPUG00000002281) #21	MAPK10 (ENSMPUG00000002290) #22	ARHGAP24 (ENSMPUG00000002295) #23
American mink	MODERN SPECIES	268															ENSNVIG00000011131	MAPK10 (ENSNVIG00000010737) #22	ARHGAP24 (ENSNVIG00000010647) #23	SERTAD2 (ENSNVIG00000010622)	AFTPH (ENSNVIG00000010584)	LGALSL (ENSNVIG00000010559)	PELI1 (ENSNVIG00000010542)	VPS54 (ENSNVIG00000010360)	UGP2 (ENSNVIG00000010305)	ENSNVIG00000010282	MDH1 (ENSNVIG00000010261)	WDPCP (ENSNVIG00000010207)
Canidae	ANCESTRAL SPECIES	40	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Red fox	MODERN SPECIES	27	SPP1 (ENSVVUG00000009167)	MEPE (ENSVVUG00000009185)	IBSP (ENSVVUG00000009187)	DMP1 (ENSVVUG00000009195)	ENSVVUG00000009196	SPARCL1 (ENSVVUG00000009202)	NUDT9 (ENSVVUG00000009210)	HSD17B11 (ENSVVUG00000009214)	HSD17B13 (ENSVVUG00000009228)	KLHL8 (ENSVVUG00000009232)	AFF1 (ENSVVUG00000009263)	C4orf36 (ENSVVUG00000009294)	SLC10A6 (ENSVVUG00000009303)	PTPN13 (ENSVVUG00000009481) #21	ENSVVUG00000013206	MAPK10 (ENSVVUG00000013277) #22	ARHGAP24 (ENSVVUG00000013997) #23	ENSVVUG00000014011	ENSVVUG00000014016	WDFY3 (ENSVVUG00000014061) #24	CDS1 (ENSVVUG00000014709) #26	NKX6-1 (ENSVVUG00000015641) #27	ENSVVUG00000015643	GPAT3 (ENSVVUG00000015664)	ABRAXAS1 (ENSVVUG00000015669)	MRPS18C (ENSVVUG00000015672)	HELQ (ENSVVUG00000015676)	HPSE (ENSVVUG00000015683)	ENSVVUG00000015815	ENSVVUG00000015827	PLAC8 (ENSVVUG00000015842)
Canis_lupus	ANCESTRAL SPECIES	30	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00950000182922.a.a.a.b.a.b.a.b.a.c	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT00940000155440.d.j	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000156240.f	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000160325.b.d
Dingo	MODERN SPECIES	342	SPP1 (ENSCAFG00020008078)	MEPE (ENSCAFG00020008084)	IBSP (ENSCAFG00020008106)	DMP1 (ENSCAFG00020008108)	DSPP (ENSCAFG00020008112)	SPARCL1 (ENSCAFG00020008125)	NUDT9 (ENSCAFG00020008135)	HSD17B11 (ENSCAFG00020008138)	HSD17B13 (ENSCAFG00020008141)	ENSCAFG00020008146	KLHL8 (ENSCAFG00020008159)	AFF1 (ENSCAFG00020008224)	SLC10A6 (ENSCAFG00020008242)	PTPN13 (ENSCAFG00020008350) #21	ENSCAFG00020009916	MAPK10 (ENSCAFG00020009946) #22	ARHGAP24 (ENSCAFG00020010087) #23	WDFY3 (ENSCAFG00020010121) #24	CDS1 (ENSCAFG00020010454) #26	NKX6-1 (ENSCAFG00020010474) #27	ENSCAFG00020010476	GPAT3 (ENSCAFG00020010481)	ABRAXAS1 (ENSCAFG00020010484)	MRPS18C (ENSCAFG00020010491)	HELQ (ENSCAFG00020010495)	HPSE (ENSCAFG00020010498)	COQ2 (ENSCAFG00020010543)	ENSCAFG00020010561	ENSCAFG00020010564	PLAC8 (ENSCAFG00020010575)	ENSCAFG00020010578
Dog	MODERN SPECIES	25	IBSP (ENSCAFG00845015862)	ENSCAFG00845015806	DMP1 (ENSCAFG00845015764)	DSPP (ENSCAFG00845015696)	SPARCL1 (ENSCAFG00845015583)	NUDT9 (ENSCAFG00845015495)	HSD17B13 (ENSCAFG00845015328)	ENSCAFG00845015190	KLHL8 (ENSCAFG00845015090)	AFF1 (ENSCAFG00845014804)	C4orf36 (ENSCAFG00845024944)	SLC10A6 (ENSCAFG00845024905)	PTPN13 (ENSCAFG00845024290) #21	ENSCAFG00845024181	ENSCAFG00845024149	MAPK10 (ENSCAFG00845023201) #22	ENSCAFG00845022736	ARHGAP24 (ENSCAFG00845022578) #23	WDFY3 (ENSCAFG00845022217) #24	CDS1 (ENSCAFG00845022114) #26	ENSCAFG00845022070	NKX6-1 (ENSCAFG00845022031) #27	ENSCAFG00845022001	GPAT3 (ENSCAFG00845021887)	ABRAXAS1 (ENSCAFG00845021759)	MRPS18C (ENSCAFG00845021626)	ENSCAFG00845021572	ENSCAFG00845021505	HPSE (ENSCAFG00845021381)	COQ2 (ENSCAFG00845021322)	ENSCAFG00845021294
Eulipotyphla	ANCESTRAL SPECIES	930																ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Common shrew	MODERN SPECIES	2735																MAPK10 (ENSSARG00000007367) #22	ENSSARG00000007327 #23
Hedgehog	MODERN SPECIES	3631																MAPK10 (ENSEEUG00000014380) #22	ARHGAP24 (ENSEEUG00000014219) #23
Atlantogenata	ANCESTRAL SPECIES	25	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Xenarthra	ANCESTRAL SPECIES	91												ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000165276	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b
Armadillo	MODERN SPECIES	2968												ENSDNOG00000040256	ENSDNOG00000045775	SLC10A6 (ENSDNOG00000017717)	PTPN13 (ENSDNOG00000004143) #21	MAPK10 (ENSDNOG00000002388) #22	ARHGAP24 (ENSDNOG00000031230) #23	ENSDNOG00000038463	ENSDNOG00000046902	ENSDNOG00000044539	ENSDNOG00000003411 #24	ENSDNOG00000044912 #24	ENSDNOG00000031734 #24	CDS1 (ENSDNOG00000035416) #26	NKX6-1 (ENSDNOG00000014879) #27	ENSDNOG00000035699	GPAT3 (ENSDNOG00000008716)	ABRAXAS1 (ENSDNOG00000018328)	ENSDNOG00000043482	ENSDNOG00000045279	ENSDNOG00000042765
Sloth	MODERN SPECIES	952																MAPK10 (ENSCHOG00000001128) #22
Afrotheria	ANCESTRAL SPECIES	35	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Tenrec	MODERN SPECIES	3486																MAPK10 (ENSETEG00000001333) #22
Afrotheria_a	ANCESTRAL SPECIES	35	ENSGT00940000160729	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00390000003791	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b	ENSGT00390000003175.a.b
Elephant	MODERN SPECIES	302	SPP1 (ENSLAFG00000006514)	MEPE (ENSLAFG00000022668)	IBSP (ENSLAFG00000015238)	DMP1 (ENSLAFG00000004781)	SPARCL1 (ENSLAFG00000011395)	NUDT9 (ENSLAFG00000011391)	HSD17B11 (ENSLAFG00000026758)	HSD17B13 (ENSLAFG00000004869)	KLHL8 (ENSLAFG00000015896)	ENSLAFG00000025818	ENSLAFG00000015880	ENSLAFG00000027149	C4orf36 (ENSLAFG00000014505)	SLC10A6 (ENSLAFG00000014503)	PTPN13 (ENSLAFG00000014491) #21	MAPK10 (ENSLAFG00000012079) #22	ARHGAP24 (ENSLAFG00000012071) #23	WDFY3 (ENSLAFG00000013162) #24	CDS1 (ENSLAFG00000013159) #26	ENSLAFG00000030127 #27	ENSLAFG00000031975	GPAT3 (ENSLAFG00000001064)	ABRAXAS1 (ENSLAFG00000001062)	MRPS18C (ENSLAFG00000001059)	HELQ (ENSLAFG00000001056)	HPSE (ENSLAFG00000000288)	COQ2 (ENSLAFG00000001174)	PLAC8 (ENSLAFG00000010674)	COPS4 (ENSLAFG00000003147)	LIN54 (ENSLAFG00000006640)	THAP9 (ENSLAFG00000016726)
Hyrax	MODERN SPECIES	2861																MAPK10 (ENSPCAG00000014365) #22	ARHGAP24 (ENSPCAG00000014221) #23
Marsupialia	ANCESTRAL SPECIES	21	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00390000017405.i	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000157350	ENSGT00390000003791	ENSGT00530000063424.b	ENSGT01030000234574.B.c.a	ENSGT00940000160897 #27	ENSGT00940000158223 #26	ENSGT00940000155680.d #24	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000166264	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320
Marsupialia_b	ANCESTRAL SPECIES	22	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00390000017405.i	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000157350	ENSGT00390000003791	ENSGT00530000063424.b.a	ENSGT01030000234574.B.c.a	ENSGT00940000160897 #27	ENSGT00940000158223 #26	ENSGT00940000155680.d #24	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00940000155291
Diprotodontia	ANCESTRAL SPECIES	25	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00390000017405.i	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000157350	ENSGT00390000003791	ENSGT00530000063424.b.a	ENSGT01030000234574.B.c.a	ENSGT00940000160897 #27	ENSGT00940000158223 #26	ENSGT00940000155680.d #24	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00940000155291
Diprotodontia_a	ANCESTRAL SPECIES	26	ENSGT00940000162658.a.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00730000111489	ENSGT00390000017405.i	ENSGT00940000160856	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00390000015549	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000157350	ENSGT00390000003791.u.a	ENSGT00530000063424.b.a	ENSGT01030000234574.B.c.a	ENSGT00940000160897 #27	ENSGT00940000158223 #26	ENSGT00940000155680.d #24	ENSGT00940000159393	ENSGT00940000159775	ENSGT00390000016547	ENSGT00940000158449	ENSGT00890000139463.b.b.b	ENSGT00940000156320	ENSGT00940000155291
Common wonbat	MODERN SPECIES	636	ABCG2 (ENSVURG00010021278)	PKD2 (ENSVURG00010021285)	SPP1 (ENSVURG00010021292)	ENSVURG00010021293	IBSP (ENSVURG00010021299)	ENSVURG00010021303	ENSVURG00010021305	HSD17B11 (ENSVURG00010021308)	HSD17B13 (ENSVURG00010021316)	KLHL8 (ENSVURG00010021319)	AFF1 (ENSVURG00010021325)	ENSVURG00010021343	SLC10A6 (ENSVURG00010021352)	PTPN13 (ENSVURG00010021373) #21	ENSVURG00010021483	MAPK10 (ENSVURG00010021558) #22	ARHGAP24 (ENSVURG00010022420) #23	HELQ (ENSVURG00010022432)	ENSVURG00010022440	GPAT3 (ENSVURG00010022446)	ENSVURG00010022456	ENSVURG00010022457	NKX6-1 (ENSVURG00010022462) #27	CDS1 (ENSVURG00010022469) #26	WDFY3 (ENSVURG00010022480) #24	PRKG2 (ENSVURG00010022522)	BMP3 (ENSVURG00010022555)
koala	MODERN SPECIES	31	ABCG2 (ENSPCIG00000011533)	PKD2 (ENSPCIG00000011516)	SPP1 (ENSPCIG00000016675)	ENSPCIG00000016677	IBSP (ENSPCIG00000020569)	ENSPCIG00000011385	ENSPCIG00000036113	ENSPCIG00000011387	HSD17B11 (ENSPCIG00000011390)	KLHL8 (ENSPCIG00000011392)	ENSPCIG00000032362	ENSPCIG00000011395	ENSPCIG00000011404	SLC10A6 (ENSPCIG00000011405)	ENSPCIG00000012380 #21	MAPK10 (ENSPCIG00000030585) #22	ARHGAP24 (ENSPCIG00000023709) #23	HELQ (ENSPCIG00000019746)	ENSPCIG00000019737	ENSPCIG00000019736	GPAT3 (ENSPCIG00000031909)	ENSPCIG00000037118	NKX6-1 (ENSPCIG00000019277) #27	CDS1 (ENSPCIG00000024379) #26	WDFY3 (ENSPCIG00000024383) #24	PRKG2 (ENSPCIG00000020110)	BMP3 (ENSPCIG00000007894)	CFAP299 (ENSPCIG00000007903)	ENSPCIG00000007911	PRDM8 (ENSPCIG00000037036)	ANTXR2 (ENSPCIG00000007919)
Wallaby	MODERN SPECIES	1841																ENSMEUG00000000947 #22
Tasmanian devil	MODERN SPECIES	5	ABCG2 (ENSSHAG00000002427)	PKD2 (ENSSHAG00000004518)	ENSSHAG00000001448	ENSSHAG00000004071	IBSP (ENSSHAG00000004585)	ENSSHAG00000026907	ENSSHAG00000029165	ENSSHAG00000032053	HSD17B11 (ENSSHAG00000028816)	HSD17B13 (ENSSHAG00000001174)	KLHL8 (ENSSHAG00000002097)	AFF1 (ENSSHAG00000004203)	ENSSHAG00000026069	SLC10A6 (ENSSHAG00000008093)	ENSSHAG00000008547 #21	ENSSHAG00000002029 #22	ENSSHAG00000006446	ENSSHAG00000007084	ENSSHAG00000007154	GPAT3 (ENSSHAG00000007521)	NKX6-1 (ENSSHAG00000024406) #27	ENSSHAG00000027228	CDS1 (ENSSHAG00000015378) #26	ENSSHAG00000015550 #24	ENSSHAG00000016791	BMP3 (ENSSHAG00000017046)	CFAP299 (ENSSHAG00000025271)	ENSSHAG00000017421	FGF5 (ENSSHAG00000023688)	PRDM8 (ENSSHAG00000028441)	ANTXR2 (ENSSHAG00000018339)
Opossum	MODERN SPECIES	4	TSPAN5 (ENSMODG00000020718)	RAP1GDS1 (ENSMODG00000020720)	ENSMODG00000020723	PKD2 (ENSMODG00000020725)	SPP1 (ENSMODG00000037234)	ENSMODG00000020729	IBSP (ENSMODG00000049814)	ENSMODG00000020734	ENSMODG00000020738	HSD17B11 (ENSMODG00000020739)	KLHL8 (ENSMODG00000020741)	AFF1 (ENSMODG00000020745)	C4orf36 (ENSMODG00000020747)	SLC10A6 (ENSMODG00000020748)	PTPN13 (ENSMODG00000020762) #21	MAPK10 (ENSMODG00000020770) #22	HELQ (ENSMODG00000020774)	ENSMODG00000020773	ENSMODG00000045788	GPAT3 (ENSMODG00000020776)	ENSMODG00000039714	NKX6-1 (ENSMODG00000020778) #27	CDS1 (ENSMODG00000020781) #26	WDFY3 (ENSMODG00000020782) #24	PRKG2 (ENSMODG00000020783)	BMP3 (ENSMODG00000020784)	ENSMODG00000044211	ENSMODG00000020786	ENSMODG00000020788	PRDM8 (ENSMODG00000048981)	ANTXR2 (ENSMODG00000020794)
Platypus	MODERN SPECIES	3	BBS12 (ENSOANG00000013636)	FGF2 (ENSOANG00000048457)	ABCG2 (ENSOANG00000013633)	PKD2 (ENSOANG00000013631)	SPP1 (ENSOANG00000042157)	IBSP (ENSOANG00000043554)	ENSOANG00000013628	ENSOANG00000015354	NUDT9 (ENSOANG00000009493)	HSD17B11 (ENSOANG00000013627)	KLHL8 (ENSOANG00000013625)	AFF1 (ENSOANG00000013624)	ENSOANG00000029338	PTPN13 (ENSOANG00000006229) #21	SLC10A6 (ENSOANG00000037189)	MAPK10 (ENSOANG00000006227) #22	ARHGAP24 (ENSOANG00000006226) #23	WDFY3 (ENSOANG00000006219) #24	CDS1 (ENSOANG00000006213) #26	NKX6-1 (ENSOANG00000049849) #27	ERGIC3 (ENSOANG00000044234)	GPAT3 (ENSOANG00000015003)	MSR1 (ENSOANG00000015004)	TUSC3 (ENSOANG00000015005)	SGCZ (ENSOANG00000037581)	DLC1 (ENSOANG00000040351)	ENSOANG00000002169	LONRF1 (ENSOANG00000003079)	ENSOANG00000036209	PPAT (ENSOANG00000007832)	ENSOANG00000007833
Sauria	ANCESTRAL SPECIES	6	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00940000160856	ENSGT00390000017405	ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00970000194080	ENSGT00940000157329.u.b	ENSGT00940000153510.b	ENSGT00940000155881
Archelosauria	ANCESTRAL SPECIES	4	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00390000014810.b	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT01030000234574.B.c.a.h	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00970000194080	ENSGT00940000157329.u.b	ENSGT00940000153510.b
Cryptodira	ANCESTRAL SPECIES	2	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00390000014810.b	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b.e	ENSGT00940000157329.u.b.f	ENSGT00940000153510.b	ENSGT00940000155881
Testudinoidea	ANCESTRAL SPECIES	34	ENSGT00610000087446	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223.m #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b.e	ENSGT00940000157329.u.b.f	ENSGT00940000153510.b	ENSGT00940000155881
Testudinidae	ANCESTRAL SPECIES	39	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT01000000220672	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000161743	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223.m #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b.f	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b.a
Goode s thornscrub tortoise	MODERN SPECIES	19	PPM1K (ENSGEVG00005011360)	ENSGEVG00005011425	ENSGEVG00005011501	PKD2 (ENSGEVG00005000452)	ENSGEVG00005000695	DMP1 (ENSGEVG00005000699)	SPARCL1 (ENSGEVG00005000722)	NUDT9 (ENSGEVG00005000747)	HSD17B11 (ENSGEVG00005000766)	ENSGEVG00005000782	KLHL8 (ENSGEVG00005000828)	AFF1 (ENSGEVG00005000895)	ENSGEVG00005000968	ENSGEVG00005000978	PTPN13 (ENSGEVG00005001136) #21	MAPK10 (ENSGEVG00005001905) #22	ARHGAP24 (ENSGEVG00005002926) #23	WDFY3 (ENSGEVG00005003027) #24	ENSGEVG00005003099	CDS1 (ENSGEVG00005003115) #26	ENSGEVG00005003134 #27	GPAT3 (ENSGEVG00005003150)	ABRAXAS1 (ENSGEVG00005003177)	ENSGEVG00005003191	HELQ (ENSGEVG00005003205)	HPSE (ENSGEVG00005003228)	COQ2 (ENSGEVG00005003245)	ENSGEVG00005003256	PLAC8 (ENSGEVG00005003279)	COPS4 (ENSGEVG00005003304)	LIN54 (ENSGEVG00005003325)
Abingdon island giant tortoise	MODERN SPECIES	2140	ENSCABG00000003465	PPM1K (ENSCABG00000003469)	ENSCABG00000003470	ENSCABG00000003473	PKD2 (ENSCABG00000003483)	ENSCABG00000003652	SPARCL1 (ENSCABG00000003668)	NUDT9 (ENSCABG00000003753)	HSD17B13 (ENSCABG00000003755)	KLHL8 (ENSCABG00000003756)	AFF1 (ENSCABG00000003762)	ENSCABG00000003789	ENSCABG00000003796	ENSCABG00000003798 #21	ENSCABG00000003802 #21	MAPK10 (ENSCABG00000003904) #22	ARHGAP24 (ENSCABG00000005865) #23
Emydidae	ANCESTRAL SPECIES	27	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223.m #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b.f	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b.a
painted turtle	MODERN SPECIES	2431	ENSCPBG00000005087	PPM1K (ENSCPBG00000005094)	ENSCPBG00000005107	ENSCPBG00000005114	PKD2 (ENSCPBG00000005129)	SPP1 (ENSCPBG00000005175)	ENSCPBG00000005183	SPARCL1 (ENSCPBG00000005198)	NUDT9 (ENSCPBG00000005216)	HSD17B11 (ENSCPBG00000005232)	ENSCPBG00000005364	KLHL8 (ENSCPBG00000005370)	AFF1 (ENSCPBG00000005382)	ENSCPBG00000005400	PTPN13 (ENSCPBG00000005412) #21	MAPK10 (ENSCPBG00000005448) #22	ARHGAP24 (ENSCPBG00000005490) #23	ENSCPBG00000005522	WDFY3 (ENSCPBG00000005618) #24	ENSCPBG00000005949 #26	NKX6-1 (ENSCPBG00000007754) #27	GPAT3 (ENSCPBG00000007766)	ABRAXAS1 (ENSCPBG00000007774)	ENSCPBG00000007783	HELQ (ENSCPBG00000007787)	HPSE (ENSCPBG00000007796)	COQ2 (ENSCPBG00000007807)	ENSCPBG00000007819	PLAC8 (ENSCPBG00000007824)	COPS4 (ENSCPBG00000007835)	LIN54 (ENSCPBG00000007858)
Three-toed box turtle	MODERN SPECIES	377	ENSTMTG00000007829	PPM1K (ENSTMTG00000007860)	ENSTMTG00000007889	ENSTMTG00000008085	PKD2 (ENSTMTG00000008154)	ENSTMTG00000008471	ENSTMTG00000008479	ENSTMTG00000008510	SPARCL1 (ENSTMTG00000003385)	NUDT9 (ENSTMTG00000003447)	HSD17B11 (ENSTMTG00000003476)	ENSTMTG00000003528	KLHL8 (ENSTMTG00000003551)	AFF1 (ENSTMTG00000003589)	PTPN13 (ENSTMTG00000004005) #21	MAPK10 (ENSTMTG00000008092) #22	ARHGAP24 (ENSTMTG00000011532) #23	WDFY3 (ENSTMTG00000011583) #24	CDS1 (ENSTMTG00000011826) #26	ENSTMTG00000011867 #27	GPAT3 (ENSTMTG00000011880)	ABRAXAS1 (ENSTMTG00000011906)	ENSTMTG00000011934	HELQ (ENSTMTG00000011954)	HPSE (ENSTMTG00000011996)	COQ2 (ENSTMTG00000012017)	ENSTMTG00000012059	ENSTMTG00000012082
Chinese turtle	MODERN SPECIES	483													KLHL8 (ENSPSIG00000013743)	AFF1 (ENSPSIG00000003759)	PTPN13 (ENSPSIG00000004467) #21	MAPK10 (ENSPSIG00000005233) #22	ENSPSIG00000006682 #23	ENSPSIG00000001754 #23	ENSPSIG00000007998	ENSPSIG00000008104	ASXL3 (ENSPSIG00000008190)	NOL4 (ENSPSIG00000008596)	ENSPSIG00000001758	DTNA (ENSPSIG00000006495)	ENSPSIG00000007992	ENSPSIG00000001760	MAPRE2 (ENSPSIG00000008817)	SPIDR (ENSPSIG00000008910)
Archosauria	ANCESTRAL SPECIES	1	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000010702	ENSGT00390000002485	ENSGT00730000111375	ENSGT00510000046787.e.a	ENSGT00390000017405	ENSGT00940000160856	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00960000189615	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000153510.b	ENSGT00940000155881	ENSGT00940000161474.b.a	ENSGT00390000003175.a.b	ENSGT00940000162090	ENSGT01030000234578.A.a	ENSGT00440000039914	ENSGT00940000154426	ENSGT00940000158010	ENSGT00940000160325.a	ENSGT00940000157329.u.b	ENSGT00940000153771.B	ENSGT00390000004874.a.b	ENSGT00940000157350
Australian saltwater crocodile	MODERN SPECIES	65	HERC6 (ENSCPRG00005013075)	PPM1K (ENSCPRG00005013096)	ENSCPRG00005013100	ENSCPRG00005013114	PKD2 (ENSCPRG00005013148)	SPP1 (ENSCPRG00005013275)	IBSP (ENSCPRG00005013280)	DMP1 (ENSCPRG00005013287)	SPARCL1 (ENSCPRG00005013294)	NUDT9 (ENSCPRG00005013342)	HSD17B11 (ENSCPRG00005013349)	ENSCPRG00005013353	KLHL8 (ENSCPRG00005013360)	AFF1 (ENSCPRG00005013372)	PTPN13 (ENSCPRG00005013391) #21	MAPK10 (ENSCPRG00005013428) #22	ARHGAP24 (ENSCPRG00005013430) #23	ENSCPRG00005013431	ENSCPRG00005013439	ENSCPRG00005013441	LIN54 (ENSCPRG00005013448)	THAP9 (ENSCPRG00005013454)	SEC31A (ENSCPRG00005013624)	SCD5 (ENSCPRG00005014907)	TMEM150C (ENSCPRG00005014944)	ENOPH1 (ENSCPRG00005014954)	HNRNPDL (ENSCPRG00005014959)	HNRNPD (ENSCPRG00005014961)	ENSCPRG00005014966	ENSCPRG00005014969	HPSE (ENSCPRG00005014984)
Aves	ANCESTRAL SPECIES	51						ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00960000189615	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b
African ostrich	MODERN SPECIES	662	ENSSCUG00000007192	ENSSCUG00000007187	CDS1 (ENSSCUG00000007163) #26	WDFY3 (ENSSCUG00000007148) #24	PPM1K (ENSSCUG00000007144)	HNRNPD (ENSSCUG00000007142)	HNRNPDL (ENSSCUG00000007141)	ENOPH1 (ENSSCUG00000007140)	TMEM150C (ENSSCUG00000007139)	SCD5 (ENSSCUG00000007138)	SEC31A (ENSSCUG00000007129)	THAP9 (ENSSCUG00000007127)	LIN54 (ENSSCUG00000007125)	COPS4 (ENSSCUG00000007121)	ARHGAP24 (ENSSCUG00000007112) #23	MAPK10 (ENSSCUG00000007107) #22	PTPN13 (ENSSCUG00000007090) #21	ENSSCUG00000007087	AFF1 (ENSSCUG00000007080)	KLHL8 (ENSSCUG00000007076)	HSD17B11 (ENSSCUG00000007073)	NUDT9 (ENSSCUG00000007070)	SPARCL1 (ENSSCUG00000007063)	DMP1 (ENSSCUG00000007060)	ENSSCUG00000007059	PKD2 (ENSSCUG00000007052)	ABCG2 (ENSSCUG00000007033)
Neognathae	ANCESTRAL SPECIES	41						ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00960000189615	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b
Neognathae_b	ANCESTRAL SPECIES	4	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT01030000235152.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00390000010702	ENSGT00940000173410	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b
Neognathae_c	ANCESTRAL SPECIES	3	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT01030000235152.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00940000173410	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000157329.u.a	ENSGT00940000157329.u.b	ENSGT00940000153771.B
Golden eagle	MODERN SPECIES		EPHA5 (ENSACCG00020007129)	TECRL (ENSACCG00020007181)	ADGRL3 (ENSACCG00020007900)	RASGEF1B (ENSACCG00020008416)	PRKG2 (ENSACCG00020008438)	HNRNPD (ENSACCG00020000280)	HNRNPDL (ENSACCG00020000282)	ENOPH1 (ENSACCG00020000285)	TMEM150C (ENSACCG00020000287)	SCD5 (ENSACCG00020000289)	SEC31A (ENSACCG00020000311)	THAP9 (ENSACCG00020000344)	LIN54 (ENSACCG00020000408)	COPS4 (ENSACCG00020000442)	ARHGAP24 (ENSACCG00020000481) #23	MAPK10 (ENSACCG00020000508) #22	PTPN13 (ENSACCG00020000760) #21	AFF1 (ENSACCG00020000855)	KLHL8 (ENSACCG00020000913)	HSD17B11 (ENSACCG00020001036)	NUDT9 (ENSACCG00020001102)	SPARCL1 (ENSACCG00020001124)	ENSACCG00020001144	IBSP (ENSACCG00020001159)	SPP1 (ENSACCG00020001167)	PKD2 (ENSACCG00020001186)	ABCG2 (ENSACCG00020001203)	MKS1 (ENSACCG00020001222)	PLAC8 (ENSACCG00020001242)	COQ2 (ENSACCG00020001262)	HPSE (ENSACCG00020001279)
Kakapo	MODERN SPECIES	24	TECRL (ENSSHBG00005015184)	ADGRL3 (ENSSHBG00005015214)	RASGEF1B (ENSSHBG00005015237)	PRKG2 (ENSSHBG00005015246)	HNRNPD (ENSSHBG00005015257)	HNRNPDL (ENSSHBG00005015265)	ENOPH1 (ENSSHBG00005015270)	TMEM150C (ENSSHBG00005015275)	SCD5 (ENSSHBG00005015283)	SEC31A (ENSSHBG00005015303)	THAP9 (ENSSHBG00005015342)	ENSSHBG00005015348	LIN54 (ENSSHBG00005015363)	COPS4 (ENSSHBG00005015370)	ARHGAP24 (ENSSHBG00005015377) #23	MAPK10 (ENSSHBG00005015385) #22	PTPN13 (ENSSHBG00005015414) #21	AFF1 (ENSSHBG00005015467)	KLHL8 (ENSSHBG00005015480)	ENSSHBG00005015484	ENSSHBG00005015489	NUDT9 (ENSSHBG00005015494)	SPARCL1 (ENSSHBG00005015499)	DMP1 (ENSSHBG00005015505)	IBSP (ENSSHBG00005000684)	ENSSHBG00005000710	SPP1 (ENSSHBG00005000720)	PKD2 (ENSSHBG00005010402)	ABCG2 (ENSSHBG00005011359)	ENSSHBG00005011399	PLAC8 (ENSSHBG00005011413)
Passeriformes	ANCESTRAL SPECIES	4	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT01030000235152.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000158660	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000160512	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063	ENSGT00940000154978	ENSGT00940000163277	ENSGT00940000162777.a.a.b.b	ENSGT00390000011932	ENSGT00940000160339	ENSGT00390000008611
Great tit	MODERN SPECIES	23	TECRL (ENSPMJG00000008928)	ADGRL3 (ENSPMJG00000008911)	RASGEF1B (ENSPMJG00000008900)	PRKG2 (ENSPMJG00000008895)	HNRNPD (ENSPMJG00000008894)	HNRNPDL (ENSPMJG00000008893)	ENOPH1 (ENSPMJG00000008892)	TMEM150C (ENSPMJG00000008891)	SCD5 (ENSPMJG00000008889)	SEC31A (ENSPMJG00000008886)	THAP9 (ENSPMJG00000008885)	ENSPMJG00000008884	LIN54 (ENSPMJG00000008881)	COPS4 (ENSPMJG00000008880)	ARHGAP24 (ENSPMJG00000008878) #23	MAPK10 (ENSPMJG00000008874) #22	PTPN13 (ENSPMJG00000008868) #21	AFF1 (ENSPMJG00000008852)	HHIP (ENSPMJG00000008846)	ANAPC10 (ENSPMJG00000008845)	ABCE1 (ENSPMJG00000008844)	OTUD4 (ENSPMJG00000008843)	SMAD1 (ENSPMJG00000008837)	MMAA (ENSPMJG00000008834)	ZNF827 (ENSPMJG00000008829)	LSM6 (ENSPMJG00000008810)	REELD1 (ENSPMJG00000008809)	ENSPMJG00000008807	SLC10A7 (ENSPMJG00000008803)	POU4F2 (ENSPMJG00000008802)	TTC29 (ENSPMJG00000008798)
Passeriformes_d	ANCESTRAL SPECIES	4	ENSGT00390000001695	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000158660	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000160512	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063	ENSGT00940000154978	ENSGT00940000163277	ENSGT00940000162777.a.a.b.b	ENSGT00390000011932.j	ENSGT00940000160339	ENSGT00390000008611
Flycatcher	MODERN SPECIES	22	ENSFALG00000005821	ENSFALG00000005794	ENSFALG00000005750	HNRNPD (ENSFALG00000005716)	HNRNPDL (ENSFALG00000005709)	ENOPH1 (ENSFALG00000023501)	TMEM150C (ENSFALG00000025686)	ENSFALG00000026606	SCD5 (ENSFALG00000027094)	SEC31A (ENSFALG00000005662)	THAP9 (ENSFALG00000005646)	LIN54 (ENSFALG00000005636)	COPS4 (ENSFALG00000005615)	ENSFALG00000027555	ENSFALG00000005594 #23	ENSFALG00000026078 #22	PTPN13 (ENSFALG00000005571) #21	ENSFALG00000005554	HHIP (ENSFALG00000005543)	ANAPC10 (ENSFALG00000005540)	ABCE1 (ENSFALG00000005539)	OTUD4 (ENSFALG00000005538)	SMAD1 (ENSFALG00000005536)	MMAA (ENSFALG00000027548)	ZNF827 (ENSFALG00000005516)	LSM6 (ENSFALG00000023575)	REELD1 (ENSFALG00000005507)	ENSFALG00000028756	ENSFALG00000028234	SLC10A7 (ENSFALG00000005478)	POU4F2 (ENSFALG00000014805)
Passeriformes_g	ANCESTRAL SPECIES	5	ENSGT00390000001695	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000158660	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000160512	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063	ENSGT00940000154978	ENSGT00940000163277	ENSGT00940000162777.a.a.b.b	ENSGT00390000011932.j	ENSGT00940000160339	ENSGT00390000008611
Passeroidea	ANCESTRAL SPECIES	4	ENSGT00390000001695	ENSGT00950000182886.a.b	ENSGT00940000155527	ENSGT00940000155816.b	ENSGT00940000159393	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000158660	ENSGT00390000013722	ENSGT00390000015089	ENSGT00940000160512	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063	ENSGT00940000154978	ENSGT00940000163277	ENSGT00940000162777.a.a.b.b	ENSGT00390000011932.j	ENSGT00940000160339	ENSGT00390000008611
Zebra finch	MODERN SPECIES	25	TECRL (ENSTGUG00000002909)	ADGRL3 (ENSTGUG00000002891)	RASGEF1B (ENSTGUG00000002879)	PRKG2 (ENSTGUG00000002872)	HNRNPD (ENSTGUG00000002858)	HNRNPDL (ENSTGUG00000002850)	ENOPH1 (ENSTGUG00000002842)	TMEM150C (ENSTGUG00000002839)	SCD5 (ENSTGUG00000002833)	SEC31A (ENSTGUG00000002804)	THAP9 (ENSTGUG00000002802)	LIN54 (ENSTGUG00000002794)	COPS4 (ENSTGUG00000002775)	ENSTGUG00000019709	ARHGAP24 (ENSTGUG00000002761) #23	MAPK10 (ENSTGUG00000002750) #22	PTPN13 (ENSTGUG00000002745) #21	AFF1 (ENSTGUG00000002726)	HHIP (ENSTGUG00000002714)	ANAPC10 (ENSTGUG00000019150)	ABCE1 (ENSTGUG00000002697)	OTUD4 (ENSTGUG00000002684)	SMAD1 (ENSTGUG00000002675)	MMAA (ENSTGUG00000024082)	ZNF827 (ENSTGUG00000002665)	LSM6 (ENSTGUG00000021492)	REELD1 (ENSTGUG00000023530)	ENSTGUG00000002651	SLC10A7 (ENSTGUG00000002640)	POU4F2 (ENSTGUG00000002637)	TTC29 (ENSTGUG00000002636)
Common canary	MODERN SPECIES	2	ADGRL3 (ENSSCAG00000014607)	ENSSCAG00000014728	RASGEF1B (ENSSCAG00000014735)	PRKG2 (ENSSCAG00000014755)	HNRNPD (ENSSCAG00000014795)	HNRNPDL (ENSSCAG00000014805)	ENOPH1 (ENSSCAG00000014815)	TMEM150C (ENSSCAG00000014818)	SCD5 (ENSSCAG00000014829)	SEC31A (ENSSCAG00000014849)	THAP9 (ENSSCAG00000014880)	LIN54 (ENSSCAG00000014887)	COPS4 (ENSSCAG00000014904)	ARHGAP24 (ENSSCAG00000014921) #23	ENSSCAG00000014936	MAPK10 (ENSSCAG00000014944) #22	PTPN13 (ENSSCAG00000014947) #21	AFF1 (ENSSCAG00000014966)	HHIP (ENSSCAG00000014976)	ANAPC10 (ENSSCAG00000014991)	ABCE1 (ENSSCAG00000014996)	OTUD4 (ENSSCAG00000015006)	SMAD1 (ENSSCAG00000015017)	MMAA (ENSSCAG00000015027)	ZNF827 (ENSSCAG00000015040)	LSM6 (ENSSCAG00000015060)	REELD1 (ENSSCAG00000015067)	ENSSCAG00000015077	ENSSCAG00000015084	ENSSCAG00000015088	ENSSCAG00000015094
Medium ground finch	DUPLICATION
Medium ground finch	MODERN SPECIES	7	TECRL (ENSGFOG00000004225)	ENSGFOG00000004217	ADGRL3 (ENSGFOG00000003862)	RASGEF1B (ENSGFOG00000003809)	PRKG2 (ENSGFOG00000003750)	HNRNPD (ENSGFOG00000003725)	HNRNPDL (ENSGFOG00000003691)	ENOPH1 (ENSGFOG00000003680)	TMEM150C (ENSGFOG00000003664)	SCD5 (ENSGFOG00000003653)	SEC31A (ENSGFOG00000003559)	THAP9 (ENSGFOG00000003529)	LIN54 (ENSGFOG00000003503)	COPS4 (ENSGFOG00000003436)	ARHGAP24 (ENSGFOG00000003395) #23	ENSGFOG00000002492 #22	MAPK10 (ENSGFOG00000009107) #22	PTPN13 (ENSGFOG00000009062) #21	AFF1 (ENSGFOG00000009040)	HHIP (ENSGFOG00000009002)	ANAPC10 (ENSGFOG00000008993)	ABCE1 (ENSGFOG00000008965)	OTUD4 (ENSGFOG00000008940)	SMAD1 (ENSGFOG00000008925)	MMAA (ENSGFOG00000008911)	ZNF827 (ENSGFOG00000008898)	LSM6 (ENSGFOG00000008892)	REELD1 (ENSGFOG00000008886)	ENSGFOG00000008879	SLC10A7 (ENSGFOG00000008868)	TTC29 (ENSGFOG00000008854)
Medium ground finch	MODERN SPECIES	7	ENSGFOG00000004217	ADGRL3 (ENSGFOG00000003862)	RASGEF1B (ENSGFOG00000003809)	PRKG2 (ENSGFOG00000003750)	HNRNPD (ENSGFOG00000003725)	HNRNPDL (ENSGFOG00000003691)	ENOPH1 (ENSGFOG00000003680)	TMEM150C (ENSGFOG00000003664)	SCD5 (ENSGFOG00000003653)	SEC31A (ENSGFOG00000003559)	THAP9 (ENSGFOG00000003529)	LIN54 (ENSGFOG00000003503)	COPS4 (ENSGFOG00000003436)	ARHGAP24 (ENSGFOG00000003395) #23	ENSGFOG00000002492 #22	MAPK10 (ENSGFOG00000009107) #22	PTPN13 (ENSGFOG00000009062) #21	AFF1 (ENSGFOG00000009040)	HHIP (ENSGFOG00000009002)	ANAPC10 (ENSGFOG00000008993)	ABCE1 (ENSGFOG00000008965)	OTUD4 (ENSGFOG00000008940)	SMAD1 (ENSGFOG00000008925)	MMAA (ENSGFOG00000008911)	ZNF827 (ENSGFOG00000008898)	LSM6 (ENSGFOG00000008892)	REELD1 (ENSGFOG00000008886)	ENSGFOG00000008879	SLC10A7 (ENSGFOG00000008868)	TTC29 (ENSGFOG00000008854)	EDNRA (ENSGFOG00000008848)
Galloanserae	ANCESTRAL SPECIES	34	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.b	ENSGT00940000157329.u.a	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00960000189615	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000159393	ENSGT00940000155816.b
Phasianidae	ANCESTRAL SPECIES	2	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.b	ENSGT00940000157329.u.a	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856.g	ENSGT00940000160856.h	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00940000173785	ENSGT00390000002485	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000159393	ENSGT00940000155816.b
Phasianidae_b	ANCESTRAL SPECIES	4	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.b	ENSGT00940000157329.u.a	ENSGT00940000158010	ENSGT00940000154426	ENSGT00440000039914	ENSGT01030000234578.A.a	ENSGT00940000162090	ENSGT00390000003175.a.b	ENSGT00940000161474.b.a	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856.g	ENSGT00940000160856.h	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00940000173410	ENSGT00390000010702	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000159393	ENSGT00940000155816.b
Chicken	MODERN SPECIES	33	MRPS18C (ENSGALG00010002565)	HPSE (ENSGALG00010002522)	COQ2 (ENSGALG00010002483)	PLACL2 (ENSGALG00010003240)	PLAC8L1 (ENSGALG00010003227)	HNRNPD (ENSGALG00010004018)	HNRNPDL (ENSGALG00010004003)	ENOPH1 (ENSGALG00010003988)	TMEM150C (ENSGALG00010003981)	SCD5 (ENSGALG00010003948)	SEC31A (ENSGALG00010003925)	THAP9 (ENSGALG00010003910)	LIN54 (ENSGALG00010003899)	COPS4 (ENSGALG00010003894)	ARHGAP24 (ENSGALG00010003878) #23	MAPK10 (ENSGALG00010003834) #22	PTPN13 (ENSGALG00010003823) #21	ENSGALG00010004505	KLHL8 (ENSGALG00010003816)	ENSGALG00010003797	ENSGALG00010004976	NUDT9 (ENSGALG00010003788)	SPARCL1 (ENSGALG00010003771)	IBSP (ENSGALG00010002428)	MEPE (ENSGALG00010002469)	SPP1 (ENSGALG00010003220)	PKD2 (ENSGALG00010003204)	PRKG2 (ENSGALG00010003198)	RASGEF1B (ENSGALG00010002880)	BMP3 (ENSGALG00010002819)	FGF5 (ENSGALG00010002801)
Turkey	MODERN SPECIES	24	PKD2 (ENSMGAG00000007470)	ENSMGAG00000007522	ENSMGAG00000007518	ENSMGAG00000007496	ENSMGAG00000019649	ENSMGAG00000022528	ENSMGAG00000007547	ENSMGAG00000007541	ENSMGAG00000022067	AFF1 (ENSMGAG00000007646)	ENSMGAG00000007610	ENSMGAG00000007557	ENSMGAG00000022999	ENSMGAG00000007675 #21	ENSMGAG00000017609 #21	ENSMGAG00000007800 #22	ENSMGAG00000007859 #23	COPS4 (ENSMGAG00000007890)	ENSMGAG00000016550	ENSMGAG00000007913	ENSMGAG00000007943	ENSMGAG00000022538	SCD5 (ENSMGAG00000008016)	ENSMGAG00000008026	ENSMGAG00000008019	ENSMGAG00000008033	ENSMGAG00000008051	ENSMGAG00000008069	ENSMGAG00000008068	ENSMGAG00000019128	ABRAXAS1 (ENSMGAG00000008138)
Japanese quail	MODERN SPECIES	22	ENSCJPG00005010174	HELQ (ENSCJPG00005010173)	HPSE (ENSCJPG00005010053)	COQ2 (ENSCJPG00005010052)	PLAC8 (ENSCJPG00005010051)	HNRNPD (ENSCJPG00005010050)	HNRNPDL (ENSCJPG00005010049)	ENOPH1 (ENSCJPG00005010048)	TMEM150C (ENSCJPG00005010047)	SCD5 (ENSCJPG00005010044)	SEC31A (ENSCJPG00005010043)	THAP9 (ENSCJPG00005010042)	LIN54 (ENSCJPG00005010041)	COPS4 (ENSCJPG00005010040)	ARHGAP24 (ENSCJPG00005010039) #23	MAPK10 (ENSCJPG00005010037) #22	PTPN13 (ENSCJPG00005010036) #21	AFF1 (ENSCJPG00005010035)	KLHL8 (ENSCJPG00005010034)	ENSCJPG00005010028	ENSCJPG00005010009	NUDT9 (ENSCJPG00005010008)	SPARCL1 (ENSCJPG00005010007)	ENSCJPG00005010006	IBSP (ENSCJPG00005010005)	ENSCJPG00005010004	SPP1 (ENSCJPG00005010001)	PKD2 (ENSCJPG00005010000)	PRKG2 (ENSCJPG00005009999)	RASGEF1B (ENSCJPG00005009993)	BMP3 (ENSCJPG00005009992)
Anatidae	ANCESTRAL SPECIES	2	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.b	ENSGT00940000157329.u.a	ENSGT00940000158010	ENSGT00440000039914	ENSGT00940000154426	ENSGT01030000234578.A.a	ENSGT00940000162090.a	ENSGT00390000003175.a.b	ENSGT00940000155881	ENSGT00940000153510.b	ENSGT00950000183015.D #23	ENSGT00940000153692.A #22	ENSGT00940000155133.b #21	ENSGT00960000189615	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT00940000160856	ENSGT00390000017405	ENSGT00510000046787.e.a	ENSGT00730000111375	ENSGT00390000002485	ENSGT00940000173410	ENSGT00390000002509	ENSGT00940000159025	ENSGT00940000162658.a.b.a	ENSGT00940000159393	ENSGT00940000155816.b
Pink-footed goose	MODERN SPECIES	163	HELQ (ENSABRG00000015348)	HPSE (ENSABRG00000015309)	COQ2 (ENSABRG00000015300)	PLAC8 (ENSABRG00000015295)	ENSABRG00000015290	HNRNPD (ENSABRG00000015285)	ENSABRG00000015284	ENOPH1 (ENSABRG00000015281)	HNRNPDL (ENSABRG00000015277)	TMEM150C (ENSABRG00000015267)	SCD5 (ENSABRG00000015261)	SEC31A (ENSABRG00000008982)	LIN54 (ENSABRG00000007914)	COPS4 (ENSABRG00000007715)	ARHGAP24 (ENSABRG00000007687) #23	MAPK10 (ENSABRG00000007217) #22	PTPN13 (ENSABRG00000004250) #21	ENSABRG00000003876	AFF1 (ENSABRG00000003764)	KLHL8 (ENSABRG00000003514)
Duck	MODERN SPECIES	22	ABRAXAS1 (ENSAPLG00000012556)	ENSAPLG00000012544	HELQ (ENSAPLG00000012292)	HPSE (ENSAPLG00000012084)	COQ2 (ENSAPLG00000012017)	PLAC8 (ENSAPLG00000020439)	ENSAPLG00000011950	HNRNPD (ENSAPLG00000031205)	HNRNPDL (ENSAPLG00000011774)	SEC31A (ENSAPLG00000010192)	ENSAPLG00000027320	LIN54 (ENSAPLG00000009904)	ENSAPLG00000029432	COPS4 (ENSAPLG00000009737)	ARHGAP24 (ENSAPLG00000006223) #23	MAPK10 (ENSAPLG00000005856) #22	ENSAPLG00000028936 #21	ENSAPLG00000020567 #21	AFF1 (ENSAPLG00000004059)	KLHL8 (ENSAPLG00000003622)	ENSAPLG00000029297	ENSAPLG00000029063	ENSAPLG00000021509	SPARCL1 (ENSAPLG00000003209)	ENSAPLG00000028651	ENSAPLG00000003038	PKD2 (ENSAPLG00000002737)	PRKG2 (ENSAPLG00000015473)	RASGEF1B (ENSAPLG00000015111)	BMP3 (ENSAPLG00000015075)	CFAP299 (ENSAPLG00000015021)
Lepidosauria	ANCESTRAL SPECIES	25	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00970000194080	ENSGT00940000157329.u.b	ENSGT00940000153510.b	ENSGT00940000155881
tuatara	MODERN SPECIES	1328							ENSSPUG00000004372	TSPAN15 (ENSSPUG00000004301)	TACR2 (ENSSPUG00000004290)	HK1 (ENSSPUG00000004260)	HKDC1 (ENSSPUG00000004238)	SUPV3L1 (ENSSPUG00000004216)	VPS26A (ENSSPUG00000004203)	KIFBP (ENSSPUG00000004193)	DDX21 (ENSSPUG00000004088)	MAPK10 (ENSSPUG00000003136) #22	ENSSPUG00000002959 #23	ENSSPUG00000002947 #23
Episquamata	ANCESTRAL SPECIES	3	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.v	ENSGT00940000157329.u.b	ENSGT00940000153510.b	ENSGT00940000155881
Laterata	ANCESTRAL SPECIES	9	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00390000017405	ENSGT00940000160856.k.b	ENSGT00940000160856.k.a	ENSGT00940000160856.l	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.v	ENSGT00940000157329.u.b	ENSGT00940000153510.b	ENSGT00940000155881
Common wall lizard	MODERN SPECIES	17	ENSPMRG00000020288	PKD2 (ENSPMRG00000020319)	SPP1 (ENSPMRG00000020339)	IBSP (ENSPMRG00000020349)	ENSPMRG00000020356	NUDT9 (ENSPMRG00000020374)	ENSPMRG00000020381	ENSPMRG00000020386	ENSPMRG00000020390	ENSPMRG00000020398	KLHL8 (ENSPMRG00000020411)	ENSPMRG00000020436	ENSPMRG00000020446	SLC10A6 (ENSPMRG00000020457)	PTPN13 (ENSPMRG00000020746) #21	MAPK10 (ENSPMRG00000022109) #22	ARHGAP24 (ENSPMRG00000022126) #23	WDFY3 (ENSPMRG00000022307) #24	CDS1 (ENSPMRG00000022811) #26	NKX6-1 (ENSPMRG00000022848) #27	ENSPMRG00000022850 #27	GPAT3 (ENSPMRG00000022855)	ABRAXAS1 (ENSPMRG00000022861)	ENSPMRG00000022864	HELQ (ENSPMRG00000022889)	HPSE (ENSPMRG00000022968)	COQ2 (ENSPMRG00000022974)	ENSPMRG00000022978	ENSPMRG00000022982	PLAC8 (ENSPMRG00000022988)	COPS4 (ENSPMRG00000022993)
Argentine black and white tegu	MODERN SPECIES	11	ENSSMRG00000012945	ENSSMRG00000012942	PKD2 (ENSSMRG00000012941)	SPP1 (ENSSMRG00000012940)	ENSSMRG00000012939	ENSSMRG00000012938	NUDT9 (ENSSMRG00000012937)	ENSSMRG00000012935	ENSSMRG00000012934	HSD17B13 (ENSSMRG00000012933)	ENSSMRG00000012932	KLHL8 (ENSSMRG00000012931)	AFF1 (ENSSMRG00000012930)	SLC10A6 (ENSSMRG00000012929)	PTPN13 (ENSSMRG00000012928) #21	MAPK10 (ENSSMRG00000012926) #22	ARHGAP24 (ENSSMRG00000012925) #23	WDFY3 (ENSSMRG00000012924) #24	CDS1 (ENSSMRG00000012923) #26	NKX6-1 (ENSSMRG00000012922) #27	GPAT3 (ENSSMRG00000012919)	ABRAXAS1 (ENSSMRG00000012918)	ENSSMRG00000012917	HELQ (ENSSMRG00000012916)	HPSE (ENSSMRG00000012915)	COQ2 (ENSSMRG00000012914)	ENSSMRG00000012913	ENSSMRG00000012912	ENSSMRG00000012911	ENSSMRG00000012910	COPS4 (ENSSMRG00000012909)
Toxicofera	ANCESTRAL SPECIES	12	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000160856.k.a	ENSGT00940000160856.l	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.u.a	ENSGT00940000157329.v.a	ENSGT00970000194080	ENSGT00940000157329.u.b	ENSGT00940000153510.b
Elapidae	ANCESTRAL SPECIES	11	ENSGT00390000015889	ENSGT00940000162703	ENSGT00940000162279	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00390000002485	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00940000155133.b.h #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b.o	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000157329.v.a	ENSGT00940000157329.u.b.c.b	ENSGT00970000194080	ENSGT00940000157329.u.b.d	ENSGT00940000153510.b
Elapidae_a	ANCESTRAL SPECIES	13	ENSGT00940000165755	ENSGT00390000015889	ENSGT00940000163989.a.a	ENSGT00940000175002	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00940000155133.b.h #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b.o	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00970000194080
Acanthophiinae	ANCESTRAL SPECIES	4	ENSGT01000000215706	ENSGT00390000015889	ENSGT00940000163989.a.a	ENSGT00940000175002	ENSGT00940000156633	ENSGT00940000162658.a.b.a	ENSGT00940000162658.a.b.b	ENSGT00940000159025	ENSGT00390000002509	ENSGT00730000111375	ENSGT00390000017405	ENSGT00960000189796	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00940000155133.b.h #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a.g	ENSGT00530000063424.b.o	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00970000194080	ENSGT00940000157329.v.a
Mainland tiger snake	MODERN SPECIES	201																MAPK10 (ENSNSUG00000015856) #22	ARHGAP24 (ENSNSUG00000016043) #23	ENSNSUG00000016090 #24	CDS1 (ENSNSUG00000016092) #26	NKX6-1 (ENSNSUG00000016094) #27
Eastern brown snake	MODERN SPECIES	9	ENSPTXG00000010685	PYURF (ENSPTXG00000010688)	ENSPTXG00000010689	PPM1K (ENSPTXG00000010691)	ENSPTXG00000010693	ENSPTXG00000010716	PKD2 (ENSPTXG00000011925)	ENSPTXG00000011932	ENSPTXG00000011933	NUDT9 (ENSPTXG00000011935)	ENSPTXG00000011937	ENSPTXG00000011939	KLHL8 (ENSPTXG00000011940)	AFF1 (ENSPTXG00000011943)	PTPN13 (ENSPTXG00000011947) #21	MAPK10 (ENSPTXG00000011959) #22	ARHGAP24 (ENSPTXG00000014492) #23	WDFY3 (ENSPTXG00000014495) #24	CDS1 (ENSPTXG00000014496) #26	ENSPTXG00000014497 #27	GPAT3 (ENSPTXG00000014498)	ABRAXAS1 (ENSPTXG00000014500)	ENSPTXG00000014501	HELQ (ENSPTXG00000014502)	HPSE (ENSPTXG00000014585)	COQ2 (ENSPTXG00000014588)	ENSPTXG00000014589	ENSPTXG00000014591
Blue-lipped sea krait	MODERN SPECIES	62																MAPK10 (ENSLLTG00000012169) #22
Indian cobra	MODERN SPECIES	3	ENSNNAG00000006695	HERC6 (ENSNNAG00000006614)	PPM1K (ENSNNAG00000006584)	ENSNNAG00000006432	ENSNNAG00000006380	PKD2 (ENSNNAG00000006357)	ENSNNAG00000006302	IBSP (ENSNNAG00000006288)	ENSNNAG00000006270	NUDT9 (ENSNNAG00000006252)	HSD17B11 (ENSNNAG00000006204)	ENSNNAG00000006173	KLHL8 (ENSNNAG00000006133)	ENSNNAG00000006105	PTPN13 (ENSNNAG00000005903) #21	MAPK10 (ENSNNAG00000005385) #22	ARHGAP24 (ENSNNAG00000005314) #23	WDFY3 (ENSNNAG00000005015) #24	CDS1 (ENSNNAG00000004940) #26	NKX6-1 (ENSNNAG00000004926) #27	GPAT3 (ENSNNAG00000004882)	ENSNNAG00000004870	ENSNNAG00000004847	ENSNNAG00000004837	HELQ (ENSNNAG00000004810)	HPSE (ENSNNAG00000004794)	COQ2 (ENSNNAG00000004748)	ENSNNAG00000004720	ENSNNAG00000004701	ENSNNAG00000004691	ENSNNAG00000004626
Lizard	MODERN SPECIES	4	ENSACAG00000012928	PPM1K (ENSACAG00000012908)	ENSACAG00000012812	ENSACAG00000028261	PKD2 (ENSACAG00000012695)	SPP1 (ENSACAG00000012670)	IBSP (ENSACAG00000012637)	ENSACAG00000024417	ENSACAG00000023103	HSD17B13 (ENSACAG00000012491)	ENSACAG00000043483	ENSACAG00000012360	ENSACAG00000012372	KLHL8 (ENSACAG00000012252)	PTPN13 (ENSACAG00000012072) #21	MAPK10 (ENSACAG00000011795) #22	ARHGAP24 (ENSACAG00000011711) #23	ENSACAG00000045031	ENSACAG00000040352	ENSACAG00000045426	ENSACAG00000037692	WDFY3 (ENSACAG00000011422) #24	CDS1 (ENSACAG00000011274) #26	ENSACAG00000005787 #27	GPAT3 (ENSACAG00000011022)	ABRAXAS1 (ENSACAG00000042829)	HELQ (ENSACAG00000010842)	HPSE (ENSACAG00000010731)	ENSACAG00000040785	COQ2 (ENSACAG00000010708)	PLAC8 (ENSACAG00000036343)
Anura	ANCESTRAL SPECIES	196											ENSGT00940000161743	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00940000155680.d #24	ENSGT00940000158223 #26	ENSGT00940000160897 #27	ENSGT01030000234574.B.c.a	ENSGT00530000063424.b	ENSGT00940000165965	ENSGT00940000157350	ENSGT00390000004874.a.b	ENSGT00940000153771.B	ENSGT00940000153510.b
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000002557	ADGRL3 (ENSLLEG00000001945)	ENSLLEG00000001848	EPHA5 (ENSLLEG00000001539)	ENSLLEG00000001447	ENSLLEG00000001443	ENSLLEG00000001061	STAP1 (ENSLLEG00000000918)	UBA6 (ENSLLEG00000000836)	ENSLLEG00000000820	ENSLLEG00000000812	KLHL8 (ENSLLEG00000000777)	AFF1 (ENSLLEG00000000695)	ENSLLEG00000000677	PTPN13 (ENSLLEG00000000491) #21	MAPK10 (ENSLLEG00000000421) #22	ARHGAP24 (ENSLLEG00000000396) #23	ENSLLEG00000000390	ENSLLEG00000000385	WDFY3 (ENSLLEG00000000278) #24	CDS1 (ENSLLEG00000000239) #26	NKX6-1 (ENSLLEG00000000217) #27	ENSLLEG00000000211	ENSLLEG00000000205	PRAG1 (ENSLLEG00000000188)	ENSLLEG00000000182	MBOAT4 (ENSLLEG00000000177)	DCTN6 (ENSLLEG00000000144)	ENSLLEG00000000135	RBPMS (ENSLLEG00000000095)	ENSLLEG00000000039
Frog	MODERN SPECIES		ENSXETG00000038949	ENSXETG00000044175	ENSXETG00000047628	ENSXETG00000043162	shroom3 (ENSXETG00000019941)	ENSXETG00000037200	ENSXETG00000041600	ENSXETG00000046019	stbd1 (ENSXETG00000034408)	ENSXETG00000042300	aff1 (ENSXETG00000019955)	ENSXETG00000042742	klhl8 (ENSXETG00000006419)	ENSXETG00000032693	hsd17b13 (ENSXETG00000006425)	mapk10 (ENSXETG00000006199) #22	arhgap24 (ENSXETG00000006200) #23	ENSXETG00000045894	ENSXETG00000042903	wdfy3 (ENSXETG00000006279) #24	ENSXETG00000039142	cds1 (ENSXETG00000006275) #26	nkx6-1 (ENSXETG00000013227) #27	ENSXETG00000042061	gpat3 (ENSXETG00000001828)	helq (ENSXETG00000001831)	ENSXETG00000049292	sec31a (ENSXETG00000000368)	lin54 (ENSXETG00000000369)	ENSXETG00000046575	cldn23 (ENSXETG00000045814)
Coelacanth	MODERN SPECIES	823															ENSLACG00000004949	MAPK10 (ENSLACG00000008912) #22	ARHGAP24 (ENSLACG00000010235) #23
Actinopterygii	ANCESTRAL SPECIES	28	ENSGT00390000013339	ENSGT00390000007731	ENSGT00940000165114	ENSGT00940000153372.A.e.a.a	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b	ENSGT00390000013620	ENSGT00940000157870	ENSGT00530000063548.A	ENSGT00390000010355	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT00950000182974.a.b	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Reedfish	MODERN SPECIES	13	BTC (ENSECRG00000012350)	ENSECRG00000012366	EREG (ENSECRG00000012385)	ENSECRG00000012458	ENSECRG00000012626	ENSECRG00000012635	rassf6 (ENSECRG00000012649)	ENSECRG00000012667	klhl8 (ENSECRG00000012687)	ENSECRG00000012743	ENSECRG00000012809	ENSECRG00000012824	AFF1 (ENSECRG00000012843)	SLC10A6 (ENSECRG00000012874)	ptpn13 (ENSECRG00000012948) #21	mapk10 (ENSECRG00000013179) #22	ENSECRG00000013283	ARHGAP24 (ENSECRG00000000840) #23	ENSECRG00000000957	ak3 (ENSECRG00000001017)	ENSECRG00000001075	ENSECRG00000001104	ENSECRG00000001123	EPHA5 (ENSECRG00000001178)	sdad1 (ENSECRG00000001334)	NAAA (ENSECRG00000001389)	ENSECRG00000001412	PPEF2 (ENSECRG00000001469)	NUP54 (ENSECRG00000001549)	scarb2a (ENSECRG00000001620)	ENSECRG00000001663
Neopterygii	ANCESTRAL SPECIES	36	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b	ENSGT00390000013620	ENSGT00940000157870	ENSGT00530000063548.A	ENSGT00390000010355	ENSGT00390000014810.b	ENSGT00940000157583	ENSGT01100000263473.a.b.h	ENSGT00940000166846	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b	ENSGT00400000024763	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000175984	ENSGT00940000166813	ENSGT00940000155332.B	ENSGT00940000157905	ENSGT00390000001442	ENSGT00940000158207	ENSGT00940000158944	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437
Spotted gar	MODERN SPECIES	658	MFHAS1 (ENSLOCG00000012154)	rpl17 (ENSLOCG00000012148)	nkx6.1 (ENSLOCG00000012142) #27	GPAT3 (ENSLOCG00000012133)	abraxas1 (ENSLOCG00000012124)	mrps18c (ENSLOCG00000012115)	HELQ (ENSLOCG00000012099)	MYL5 (ENSLOCG00000012090)	hpse (ENSLOCG00000012076)	btc (ENSLOCG00000012070)	ENSLOCG00000012063	EREG (ENSLOCG00000012059)	EPGN (ENSLOCG00000012056)	mthfd2l (ENSLOCG00000012052)	ptpn13 (ENSLOCG00000012036) #21	mapk10 (ENSLOCG00000012028) #22	ARHGAP24 (ENSLOCG00000012018) #23	esm1 (ENSLOCG00000012017)	ENSLOCG00000011999	ENSLOCG00000011989	hint2 (ENSLOCG00000011981)	mrps30 (ENSLOCG00000011976)	HCN1 (ENSLOCG00000011966)	EMB (ENSLOCG00000011959)	ccbe1 (ENSLOCG00000011947)	lman1 (ENSLOCG00000011935)	ENSLOCG00000011928	cplx4b (ENSLOCG00000011926)	rx3 (ENSLOCG00000011917)	ENSLOCG00000011909	ZNF532 (ENSLOCG00000011902)
Osteoglossocephalai	ANCESTRAL SPECIES	125							ENSGT00390000010355	ENSGT00940000157583	ENSGT00940000177679	ENSGT01100000263473.a.b.h.b	ENSGT00940000166846	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00950000182974.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00390000018044.b.a	ENSGT00940000154851.B.a	ENSGT00530000063340	ENSGT00940000160524
Clupeocephala	ANCESTRAL SPECIES	8	ENSGT00940000162033.a.a	ENSGT00940000158880	ENSGT00940000155137.a.a	ENSGT00940000164650	ENSGT00940000158906.i	ENSGT00940000154896.l	ENSGT00940000154807.a.a	ENSGT00940000159208.B	ENSGT01100000263473.b.a.a.a	ENSGT01100000263473.a.b.h.b	ENSGT00940000166846	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00950000182974.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00390000018044.b.a	ENSGT00940000154851.B.a	ENSGT00490000043356.b
Euteleosteomorpha	ANCESTRAL SPECIES	27	ENSGT00390000007731	ENSGT00940000153372.A.e.a.a	ENSGT01030000235124	ENSGT00390000010355	ENSGT00980000198774	ENSGT00950000182808.a.a.a.a.b	ENSGT00940000157583	ENSGT01030000234575.c.b	ENSGT01100000263473.a.b.h.b	ENSGT00940000166846	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000177777	ENSGT00950000182974.a.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00390000018044.b.a	ENSGT00940000154851.B.a	ENSGT00490000043356.b
Protacanthopterygii	ANCESTRAL SPECIES	26									ENSGT00390000010355	ENSGT00940000157583	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b	ENSGT00400000024763.s	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00390000018044.b.a	ENSGT00940000154851.B.a	ENSGT00490000043356.b	ENSGT00830000128422	ENSGT00940000153771.B
Northern pike	MODERN SPECIES	13	ENSELUG00000031045	SCARB2 (ENSELUG00000022549)	ENSELUG00000026766	PPEF2 (ENSELUG00000022304)	NUP54 (ENSELUG00000022151)	ENSELUG00000031248	ENSELUG00000007044	ENSELUG00000019953	ENSELUG00000015132	klhl8 (ENSELUG00000015173)	ENSELUG00000015508	ENSELUG00000001701	sdad1 (ENSELUG00000001699)	ptpn13 (ENSELUG00000020594) #21	ENSELUG00000029970	mapk10 (ENSELUG00000030357) #22	ARHGAP24 (ENSELUG00000001657) #23	esm1 (ENSELUG00000005834)	ENSELUG00000031169	HCN1 (ENSELUG00000023788)	ENSELUG00000025210	ccbe1 (ENSELUG00000023738)	lman1 (ENSELUG00000023663)	cplx4a (ENSELUG00000033227)	rx3 (ENSELUG00000009868)	ENSELUG00000009847	ZNF532 (ENSELUG00000009808)	ENSELUG00000009741	ENSELUG00000001312	NEDD4L (ENSELUG00000009580)	prlra (ENSELUG00000009331)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153692.A.a.a #22
Salmoninae_a	ANCESTRAL SPECIES	24	ENSGT00940000157157.b.a.b	ENSGT00950000182975.a.a.b.l	ENSGT01030000234573.A.b.b.b.l	ENSGT00390000001437	ENSGT00940000162045.n	ENSGT00390000017443.ob	ENSGT00940000159569	ENSGT00390000008732.b.a.b	ENSGT00390000011509	ENSGT00940000159324	ENSGT00950000182974.a.b.g	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00940000153372.A.e.a.b.b.b	ENSGT00940000157583.k	ENSGT00940000153692.A.a.a #22
Salmo	ANCESTRAL SPECIES	142	ENSGT00950000182975.a.a.b.l	ENSGT01030000234573.A.b.b.b.l	ENSGT00390000001437	ENSGT00940000162045.n	ENSGT00390000017443.ob	ENSGT00940000159569	ENSGT00390000008732.b.a.b	ENSGT00390000011509	ENSGT00940000159324	ENSGT00950000182974.a.b.g	ENSGT00400000024763.s.a	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00940000153372.A.e.a.b.b.b	ENSGT00940000157583.k	ENSGT00940000153692.A.a.a #22
Atlantic salmon	MODERN SPECIES		mier3a (ENSSSAG00000018538)	ENSSSAG00000025146	ENSSSAG00000083287	pdxp (ENSSSAG00000025400)	pdcl (ENSSSAG00000025848)	ENSSSAG00000026076	ENSSSAG00000094674	ENSSSAG00000103536	ENSSSAG00000031178	ENSSSAG00000031281	ENSSSAG00000031542	ENSSSAG00000033265	ENSSSAG00000000130	ENSSSAG00000098473	ENSSSAG00000000145	ENSSSAG00000000600 #22	ENSSSAG00000040023	ENSSSAG00000121509	ENSSSAG00000117214	ENSSSAG00000093603	ENSSSAG00000094559	mtr (ENSSSAG00000088743)	ENSSSAG00000107457	ENSSSAG00000113300	ENSSSAG00000105738	ENSSSAG00000087513	PSTK (ENSSSAG00000068978)	IKZF5 (ENSSSAG00000068982)	ACADSB (ENSSSAG00000068986)	HMX3 (ENSSSAG00000069042)	HMX2 (ENSSSAG00000104322)
River trout	MODERN SPECIES	15	ENSSTUG00000035329	ENSSTUG00000035319	psmd5 (ENSSTUG00000035301)	B3GALT9 (ENSSTUG00000035297)	ENSSTUG00000035289	rx3 (ENSSTUG00000035264)	cplx4a (ENSSTUG00000035246)	lman1 (ENSSTUG00000035094)	ENSSTUG00000035081	HCN1 (ENSSTUG00000035042)	ENSSTUG00000035019	ENSSTUG00000035018	NUP54 (ENSSTUG00000034911)	PPEF2 (ENSSTUG00000034838)	ENSSTUG00000034817	mapk10 (ENSSTUG00000034312) #22
Oncorhynchus	ANCESTRAL SPECIES	21	ENSGT00940000163466	ENSGT00940000157157.b.a.b	ENSGT00950000182975.a.a.b.l	ENSGT01030000234573.A.b.b.b.l	ENSGT00390000001437	ENSGT00940000162045.n	ENSGT00940000159569	ENSGT00390000008732.b.a.b	ENSGT00390000011509	ENSGT00940000159324	ENSGT00950000182974.a.b.g	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00940000153372.A.e.a.b.b.b	ENSGT00940000157583.k	ENSGT00940000153692.A.a.a #22	ENSGT00940000159814.j	ENSGT00940000153432.A.b.a	ENSGT00940000159872.a	ENSGT00390000008772.k	ENSGT00390000018741.b	ENSGT00940000158581.i	ENSGT00390000017459	ENSGT00940000166449.m.a	ENSGT00950000183175.B.b.g	ENSGT00940000156229.cb	ENSGT00390000012078.b.jb	ENSGT00940000156411.od.a.a	ENSGT00390000018845.e.g	ENSGT00940000157066.p.c	ENSGT00940000166601.g
Oncorhynchus_a	ANCESTRAL SPECIES	73											ENSGT00950000182974.a.b.g	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00940000153372.A.e.a.b.b.b	ENSGT00940000157583.k	ENSGT00940000153692.A.a.a #22	ENSGT00940000159814.j	ENSGT00940000153432.A.b.a	ENSGT00940000159872.a	ENSGT00390000008772.k	ENSGT00940000170114	ENSGT00940000158581.i	ENSGT00390000017459	ENSGT00940000166449.m.a	ENSGT00950000183175.B.b.g	ENSGT00940000156229.cb	ENSGT00390000012078.b.jb	ENSGT00940000156411.od.a.a	ENSGT00390000018845.e.g	ENSGT00940000157066.p.c	ENSGT00940000166601.g
Chinook salmon	MODERN SPECIES	12	kmt5aa (ENSOTSG00005040273)	RILPL1 (ENSOTSG00005040268)	HIP1R (ENSOTSG00005038206)	ENSOTSG00005038197	denr (ENSOTSG00005038179)	ENSOTSG00005038177	ENSOTSG00005038174	denr (ENSOTSG00005038097)	ENSOTSG00005038096	BCL7A (ENSOTSG00005038095)	ENSOTSG00005038094	PPEF2 (ENSOTSG00005037834)	NUP54 (ENSOTSG00005037824)	ENSOTSG00005037819	klhl8 (ENSOTSG00005037690)	mapk10 (ENSOTSG00005035107) #22	ENSOTSG00005035069	ZBTB7C (ENSOTSG00005035064)	CTIF (ENSOTSG00005035061)	smad7 (ENSOTSG00005035057)	DYM (ENSOTSG00005034949)	ENSOTSG00005034946	add1 (ENSOTSG00005034797)	nop14 (ENSOTSG00005034672)	ENSOTSG00005034667	ENSOTSG00005034666	klf4 (ENSOTSG00005022892)	rad23b (ENSOTSG00005022884)	ZNF462 (ENSOTSG00005022883)	TMEM38B (ENSOTSG00005022880)	PRAG1 (ENSOTSG00005022878)
Coho salmon	MODERN SPECIES	15	prune2 (ENSOKIG00005010672)	ENSOKIG00005010487	ENSOKIG00005010462	ENSOKIG00005010451	THBS4 (ENSOKIG00005009058)	ENSOKIG00005008962	fbp1b (ENSOKIG00005008909)	ENSOKIG00005008900	ENSOKIG00005008876	ENSOKIG00005008833	ENSOKIG00005008780	NUP54 (ENSOKIG00005008734)	PPEF2 (ENSOKIG00005008386)	ENSOKIG00005008336	KLHL8 (ENSOKIG00005008274)	mapk10 (ENSOKIG00005007381) #22	ENSOKIG00005007320	ENSOKIG00005007316	ZBTB7C (ENSOKIG00005007314)	CTIF (ENSOKIG00005007305)	smad7 (ENSOKIG00005007281)	DYM (ENSOKIG00005007248)	ENSOKIG00005007228	ADD1 (ENSOKIG00005007032)	nop14 (ENSOKIG00005006291)	ENSOKIG00005006197	ENSOKIG00005006168	klf4 (ENSOKIG00005006137)	ENSOKIG00005006127	RAD23B (ENSOKIG00005006082)	ZNF462 (ENSOKIG00005044500)
Rainbow trout	MODERN SPECIES	26	ENSOMYG00000038402	ENSOMYG00000077806	ENSOMYG00000057956	pdxp (ENSOMYG00000038388)	ENSOMYG00000038380	ENSOMYG00000038372	ENSOMYG00000065334	ENSOMYG00000038348	ENSOMYG00000070362	ENSOMYG00000038130	ENSOMYG00000038043	ENSOMYG00000037980	ENSOMYG00000037864	ENSOMYG00000037695	ENSOMYG00000037671	ENSOMYG00000037354 #22	ZBTB7C (ENSOMYG00000037242)	CTIF (ENSOMYG00000037229)	smad7 (ENSOMYG00000037213)	DYM (ENSOMYG00000037162)	C18orf32 (ENSOMYG00000037140)	ENSOMYG00000036920	ENSOMYG00000036697	ENSOMYG00000036620	ENSOMYG00000059529	ENSOMYG00000050421	ENSOMYG00000036588	RAD23B (ENSOMYG00000036565)	ENSOMYG00000058239	ENSOMYG00000036558	ENSOMYG00000036548
Huchen	MODERN SPECIES	1563												klhl8 (ENSHHUG00000045636)	ENSHHUG00000045769	ENSHHUG00000045775 ##21	ENSHHUG00000045778	mapk10 (ENSHHUG00000045800) #22	ENSHHUG00000047110	ARHGAP24 (ENSHHUG00000047114) #23
Salmoninae	ANCESTRAL SPECIES	247							ENSGT00940000164588.f.b	ENSGT00390000010355	ENSGT00940000157583.l	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b.h	ENSGT00400000024763.s	ENSGT00940000164588.f.a	ENSGT00940000155133.b #21	ENSGT00940000153692.A.a.b #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207.w	ENSGT00390000014907.B	ENSGT00940000159146.h	ENSGT00950000182938.b.b.b.b.b.b.h.b.a	ENSGT00940000166467.c	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Salmoninae_a	ANCESTRAL SPECIES	57	ENSGT00940000157778.q.b	ENSGT00940000157778.r	ENSGT00390000007731.a	ENSGT00940000153372.A.e.a.a.d	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b.a	ENSGT00940000164588.f.b	ENSGT00390000010355	ENSGT00940000157583.l	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b.h	ENSGT00400000024763.s	ENSGT00940000164588.f.a	ENSGT00940000155133.b #21	ENSGT00940000153692.A.a.b #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207.w	ENSGT00390000014907.B	ENSGT00940000159146.h	ENSGT00950000182938.b.b.b.b.b.b.h.b.a	ENSGT00940000166467.c	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Salmo	ANCESTRAL SPECIES	13	ENSGT00950000183003.a.a.a.a.a.d	ENSGT00940000157778.q.b	ENSGT01000000218681	ENSGT00390000007731.a	ENSGT00940000153372.A.e.a.a.c.a	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b.a	ENSGT00940000164588.f.b	ENSGT00390000010355	ENSGT00940000157583.l	ENSGT01050000244842.b	ENSGT00950000182974.a.b.h	ENSGT00400000024763.s.b	ENSGT00940000164588.f.a	ENSGT00940000155133.b #21	ENSGT00940000153692.A.a.b #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207.w	ENSGT00390000014907.B	ENSGT00940000159146.h	ENSGT00950000182938.b.b.b.b.b.b.h.b.a	ENSGT00940000166467.c	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000116707	ENSSSAG00000100394	ENSSSAG00000120113	ENSSSAG00000115255	ENSSSAG00000026343	ENSSSAG00000065858	KLHL8 (ENSSSAG00000065679)	ENSSSAG00000083461	ENSSSAG00000065642	ENSSSAG00000065627	ENSSSAG00000065603	ENSSSAG00000083239	ptpn13 (ENSSSAG00000054972) #21	ENSSSAG00000104825	ENSSSAG00000115244	mapk10 (ENSSSAG00000044887) #22	ARHGAP24 (ENSSSAG00000044697) #23	esm1 (ENSSSAG00000044667)	ENSSSAG00000042878	ENSSSAG00000042789	ccbe1 (ENSSSAG00000042775)	lman1 (ENSSSAG00000039268)	cplx4a (ENSSSAG00000115711)	rax (ENSSSAG00000038944)	ENSSSAG00000059495	ENSSSAG00000059383	ENSSSAG00000059310	ENSSSAG00000111272	ENSSSAG00000105591	ENSSSAG00000059288	ENSSSAG00000117230
River trout	MODERN SPECIES	6	ENSSTUG00000013588	ENSSTUG00000013392	ENSSTUG00000013346	ENSSTUG00000013343	sdad1 (ENSSTUG00000013157)	ENSSTUG00000013123	klhl8 (ENSSTUG00000012848)	ENSSTUG00000012567	ENSSTUG00000012545	ENSSTUG00000012535	ENSSTUG00000012529	ENSSTUG00000012514	ENSSTUG00000012452	ENSSTUG00000012443	ptpn13 (ENSSTUG00000012228) #21	mapk10 (ENSSTUG00000010196) #22	ARHGAP24 (ENSSTUG00000010099) #23	esm1 (ENSSTUG00000010085)	ENSSTUG00000010080	HCN1 (ENSSTUG00000010057)	ccbe1 (ENSSTUG00000010042)	lman1 (ENSSTUG00000009758)	cplx4a (ENSSTUG00000009735)	rx3 (ENSSTUG00000009731)	ENSSTUG00000009724	ZNF532 (ENSSTUG00000009653)	ENSSTUG00000009633	ENSSTUG00000009614	NEDD4L (ENSSTUG00000015360)	prlra (ENSSTUG00000015242)	agxt2 (ENSSTUG00000015136)
Oncorhynchus	ANCESTRAL SPECIES	47	ENSGT00940000157778.q.b	ENSGT00940000157778.r	ENSGT00390000007731.a	ENSGT00940000153372.A.e.a.a.d	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b.a	ENSGT00940000164588.f.b	ENSGT00390000010355	ENSGT00940000157583.l	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b.h	ENSGT00400000024763.s	ENSGT00940000164588.f.a	ENSGT00940000155133.b #21	ENSGT00940000153692.A.a.b #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207.w.a	ENSGT00390000014907.B	ENSGT00940000159146.h	ENSGT00950000182938.b.b.b.b.b.b.h.b.a	ENSGT00940000166467.c	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Rainbow trout	MODERN SPECIES	3	LEAP-2C (ENSOMYG00000014879)	ENSOMYG00000014889	ENSOMYG00000055444	ENSOMYG00000053990	ENSOMYG00000015021	KLHL8 (ENSOMYG00000015077)	ENSOMYG00000015098	ENSOMYG00000015119	ENSOMYG00000015134	ENSOMYG00000077036	ENSOMYG00000015142	ENSOMYG00000057615	ENSOMYG00000015157	ENSOMYG00000062497	ptpn13 (ENSOMYG00000015251) #21	mapk10 (ENSOMYG00000015316) #22	ARHGAP24 (ENSOMYG00000015332) #23	esm1 (ENSOMYG00000015362)	ENSOMYG00000051406	ENSOMYG00000066734	hcn1 (ENSOMYG00000015430)	ccbe1 (ENSOMYG00000015438)	lman1 (ENSOMYG00000015539)	ENSOMYG00000050288	cplx4a (ENSOMYG00000015823)	rx3 (ENSOMYG00000015831)	ENSOMYG00000015838	ENSOMYG00000015862	ENSOMYG00000015908	ENSOMYG00000015920	ENSOMYG00000015962
Oncorhynchus_a	ANCESTRAL SPECIES	48	ENSGT00940000157778.q.b	ENSGT00940000157778.r	ENSGT00390000007731.a	ENSGT00940000153372.A.e.a.a.d	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b.a	ENSGT00940000164588.f.b	ENSGT00390000010355	ENSGT00940000157583.l	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00950000182974.a.b.h	ENSGT00400000024763.s	ENSGT00940000164588.f.a	ENSGT00940000155133.b #21	ENSGT00940000153692.A.a.b #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207.w.a	ENSGT00390000014907.B	ENSGT00940000159146.h	ENSGT00950000182938.b.b.b.b.b.b.h.b.a	ENSGT00940000166467.c	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Coho salmon	MODERN SPECIES	26	ENSOKIG00005006033	ENSOKIG00005006049	ENSOKIG00005006077	ENSOKIG00005006178	ENSOKIG00005027751	ENSOKIG00005027765	sdad1 (ENSOKIG00005027847)	klhl8 (ENSOKIG00005027986)	ENSOKIG00005028107	ENSOKIG00005028136	ENSOKIG00005028151	ENSOKIG00005028170	ENSOKIG00005028175	ENSOKIG00005028189	ptpn13 (ENSOKIG00005028246) #21	mapk10 (ENSOKIG00005028404) #22	ARHGAP24 (ENSOKIG00005028754) #23	ENSOKIG00005028795	esm1 (ENSOKIG00005028805)	ENSOKIG00005028844	HCN1 (ENSOKIG00005030883)	ccbe1 (ENSOKIG00005030933)	lman1 (ENSOKIG00005031053)	cplx4a (ENSOKIG00005031412)	rx3 (ENSOKIG00005031426)	ENSOKIG00005031439	ZNF532 (ENSOKIG00005031460)	ENSOKIG00005031568	ENSOKIG00005031578	NEDD4L (ENSOKIG00005031655)	ENSOKIG00005032365
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005003115	ENSOTSG00005003351	ENSOTSG00005003357	ENSOTSG00005003412	ENSOTSG00005003413	sdad1 (ENSOTSG00005003418)	ENSOTSG00005003625	klhl8 (ENSOTSG00005003641)	ENSOTSG00005004662	ENSOTSG00005004670	ENSOTSG00005004708	ENSOTSG00005004712	AFF1 (ENSOTSG00005004719)	ENSOTSG00005004728	ENSOTSG00005004732	mapk10 (ENSOTSG00005004813) #22	ARHGAP24 (ENSOTSG00005008554) #23	ENSOTSG00005008556	esm1 (ENSOTSG00005008558)	HCN1 (ENSOTSG00005008566)	ENSOTSG00005008567	prdm14 (ENSOTSG00005008568)	ENSOTSG00005008569	ENSOTSG00005008570	lman1 (ENSOTSG00005008572)	cplx4a (ENSOTSG00005009195)	rx3 (ENSOTSG00005009196)	ENSOTSG00005009197	ZNF532 (ENSOTSG00005009198)	ENSOTSG00005009200	ENSOTSG00005009202
Huchen	MODERN SPECIES	3816																mapk10 (ENSHHUG00000048376) #22	ARHGAP24 (ENSHHUG00000048395) #23
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000153692.A.b #22
Huchen	MODERN SPECIES	6399																MAPK10 (ENSHHUG00000024945) #22
Acanthomorphata	ANCESTRAL SPECIES	43	ENSGT00940000157870.a.a	ENSGT00940000157870.b	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125	ENSGT00510000047097
Cod	MODERN SPECIES	10	ENSGMOG00000019101	ENSGMOG00000029641	ENSGMOG00000019112	ENSGMOG00000019123	ENSGMOG00000019128	ENSGMOG00000035669	ENSGMOG00000035375	ENSGMOG00000034814	ENSGMOG00000023817	ENSGMOG00000030800	ENSGMOG00000002584	SLC10A6 (ENSGMOG00000002619)	sdad1 (ENSGMOG00000002646)	ENSGMOG00000022883	ptpn13 (ENSGMOG00000002695) #21	mapk10 (ENSGMOG00000002833) #22	ARHGAP24 (ENSGMOG00000023603) #23	esm1 (ENSGMOG00000026076)	ENSGMOG00000002922	ENSGMOG00000032204	ccbe1 (ENSGMOG00000002934)	lman1 (ENSGMOG00000002968)	cplx4a (ENSGMOG00000030743)	rx3 (ENSGMOG00000028359)	ENSGMOG00000003031	ENSGMOG00000036035	ENSGMOG00000003121	ENSGMOG00000023919	ENSGMOG00000003174	prlra (ENSGMOG00000026946)	agxt2 (ENSGMOG00000003282)
Euacanthomorphacea	ANCESTRAL SPECIES	12	ENSGT00940000157870.b	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Pinecone sodierfish	MODERN SPECIES	3	btc (ENSMMDG00005002350)	slc45a2 (ENSMMDG00005002352)	amacr (ENSMMDG00005002354)	ENSMMDG00005002356	NUP54 (ENSMMDG00005002371)	PPEF2 (ENSMMDG00005002708)	ENSMMDG00005002721	ENSMMDG00005002729	ENSMMDG00005002775	ENSMMDG00005002986	klhl8 (ENSMMDG00005003031)	SLC10A6 (ENSMMDG00005003792)	sdad1 (ENSMMDG00005003912)	ENSMMDG00005003932	ptpn13 (ENSMMDG00005003955) #21	mapk10 (ENSMMDG00005004116) #22	ARHGAP24 (ENSMMDG00005005249) #23	ENSMMDG00005005256	esm1 (ENSMMDG00005005257)	ENSMMDG00005005264	HCN1 (ENSMMDG00005005288)	ccbe1 (ENSMMDG00005005293)	lman1 (ENSMMDG00005005306)	cplx4a (ENSMMDG00005005444)	rx3 (ENSMMDG00005005448)	ENSMMDG00005005449	ZNF532 (ENSMMDG00005005450)	ENSMMDG00005005452	ENSMMDG00005005454	NEDD4L (ENSMMDG00005005530)	prlra (ENSMMDG00005012806)
Percomorphaceae	ANCESTRAL SPECIES	16	ENSGT00940000157870.a.a	ENSGT00940000157870.b	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Tiger tail seahorse	MODERN SPECIES	320	ENSHCOG00000010565	kcnip3b (ENSHCOG00000010587)	trim69 (ENSHCOG00000010609)	bmp1b (ENSHCOG00000010653)	ANTXR1 (ENSHCOG00000010687)	AAK1 (ENSHCOG00000010719)	anxa4 (ENSHCOG00000010751)	anxa4 (ENSHCOG00000010863)	brf2 (ENSHCOG00000010882)	ENSHCOG00000010886	cabp1b (ENSHCOG00000010907)	ENSHCOG00000010919	ENSHCOG00000010945	ENSHCOG00000010994 #21	ptpn13 (ENSHCOG00000011056) #21	mapk10 (ENSHCOG00000011085) #22	ARHGAP24 (ENSHCOG00000011094) #23	esm1 (ENSHCOG00000011099)	ENSHCOG00000011109	ENSHCOG00000011131	ENSHCOG00000011143	ENSHCOG00000011205	HCN1 (ENSHCOG00000011236)	ccbe1 (ENSHCOG00000011287)	lman1 (ENSHCOG00000011301)	cplx4a (ENSHCOG00000011309)	rx3 (ENSHCOG00000011317)	ZNF532 (ENSHCOG00000011338)	ENSHCOG00000011370	ENSHCOG00000011392	NEDD4L (ENSHCOG00000011529)
Percomorphaceae_B	ANCESTRAL SPECIES	16	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01050000244842.a.b.a.o	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Ovalentaria	ANCESTRAL SPECIES	16	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000177441	ENSGT00980000198667	ENSGT00940000171177	ENSGT00940000169428	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467
Ovalentaria_B	ANCESTRAL SPECIES	14	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00940000177441	ENSGT00980000198667	ENSGT00940000171177	ENSGT00940000169428	ENSGT00940000182456	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b
Cichlidae	ANCESTRAL SPECIES	10	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01100000263568.a	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT01100000263473.a.b.h.b	ENSGT00940000177679	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Pseudocrenilabrinae	ANCESTRAL SPECIES		ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01100000263568.a	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT01100000263473.a.b.h.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Pseudocrenilabrinae_A	ANCESTRAL SPECIES		ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.f	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Haplochromini	ANCESTRAL SPECIES		ENSGT00940000161260	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.f	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Burton s mouthbrooder	MODERN SPECIES	287	slc45a2 (ENSHBUG00000006027)	amacr (ENSHBUG00000006006)	ENSHBUG00000005983	NUP54 (ENSHBUG00000005941)	PPEF2 (ENSHBUG00000005907)	ENSHBUG00000005890	ENSHBUG00000005854	ENSHBUG00000005828	ENSHBUG00000005793	ENSHBUG00000005764	ENSHBUG00000005740	klhl8 (ENSHBUG00000005722)	sdad1 (ENSHBUG00000005701)	ENSHBUG00000005612	ptpn13 (ENSHBUG00000005541) #21	mapk10 (ENSHBUG00000004443) #22	ARHGAP24 (ENSHBUG00000004348) #23
Haplochromini_A	ANCESTRAL SPECIES	12	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT00940000177679	ENSGT00940000157583	ENSGT00980000199827	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.f	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Haplochromini_B	ANCESTRAL SPECIES	4	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01100000263568.b.b	ENSGT00940000180865	ENSGT00940000177679	ENSGT00940000157583	ENSGT00980000199827	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00980000198667	ENSGT00940000175984	ENSGT00940000166813.f	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Zebra mbuna	MODERN SPECIES	1110	slc45a2 (ENSMZEG00005000198)	amacr (ENSMZEG00005000134)	ENSMZEG00005000088	NUP54 (ENSMZEG00005000058)	PPEF2 (ENSMZEG00005020456)	ENSMZEG00005020450	ENSMZEG00005020442	ENSMZEG00005020437	ENSMZEG00005020433	ENSMZEG00005020429	ENSMZEG00005020401	klhl8 (ENSMZEG00005020381)	ENSMZEG00005020376	sdad1 (ENSMZEG00005020345)	ptpn13 (ENSMZEG00005020126) #21	mapk10 (ENSMZEG00005020062) #22	ENSMZEG00005020054 #23	esm1 (ENSMZEG00005020048)	ENSMZEG00005020044	ENSMZEG00005020036	ENSMZEG00005020030	ENSMZEG00005020025	ENSMZEG00005020021	HCN1 (ENSMZEG00005020010)	ccbe1 (ENSMZEG00005020003)	lman1 (ENSMZEG00005019991)	cplx4a (ENSMZEG00005019987)	rx3 (ENSMZEG00005019983)	ENSMZEG00005019981	ZNF532 (ENSMZEG00005019972)	ENSMZEG00005019951
Eastern happy	MODERN SPECIES	19	slc45a2 (ENSACLG00000002542)	ENSACLG00000002562	ENSACLG00000002567	NUP54 (ENSACLG00000002576)	PPEF2 (ENSACLG00000002631)	ENSACLG00000002883	ENSACLG00000002905	ENSACLG00000002946	ENSACLG00000002997	ENSACLG00000003014	ENSACLG00000003040	klhl8 (ENSACLG00000003084)	sdad1 (ENSACLG00000003096)	ENSACLG00000003208	ptpn13 (ENSACLG00000003270) #21	mapk10 (ENSACLG00000004065) #22	ARHGAP24 (ENSACLG00000004085) #23	esm1 (ENSACLG00000004377)	ENSACLG00000004381	ENSACLG00000004386	ENSACLG00000004395	ENSACLG00000004404	ENSACLG00000004418	HCN1 (ENSACLG00000004432)	ccbe1 (ENSACLG00000004472)	lman1 (ENSACLG00000004513)	cplx4a (ENSACLG00000004608)	ENSACLG00000004613	rx3 (ENSACLG00000004631)	ENSACLG00000004638	ZNF532 (ENSACLG00000004656)
P. nyererei	MODERN SPECIES	297	slc45a2 (ENSPNYG00000006372)	amacr (ENSPNYG00000006397)	ENSPNYG00000006406	nup54 (ENSPNYG00000006416)	PPEF2 (ENSPNYG00000006441)	ENSPNYG00000006481	ENSPNYG00000006525	ENSPNYG00000006694	ENSPNYG00000006715	ENSPNYG00000006748	ENSPNYG00000006763	klhl8 (ENSPNYG00000006780)	sdad1 (ENSPNYG00000006816)	ENSPNYG00000006884	ptpn13 (ENSPNYG00000006900) #21	mapk10 (ENSPNYG00000006997) #22	ENSPNYG00000007033 #23	esm1 (ENSPNYG00000007073)	ENSPNYG00000007077	ENSPNYG00000007089	ENSPNYG00000007103	ENSPNYG00000007123	ENSPNYG00000007134	HCN1 (ENSPNYG00000007153)	ccbe1 (ENSPNYG00000007171)	lman1 (ENSPNYG00000007203)	cplx4a (ENSPNYG00000007245)	rx3 (ENSPNYG00000007287)	ENSPNYG00000007303	ZNF532 (ENSPNYG00000007315)	ENSPNYG00000007339
Lyretail cichlid	MODERN SPECIES	304	btc (ENSNBRG00000011156)	RXFP3 (ENSNBRG00000011144)	slc45a2 (ENSNBRG00000011125)	amacr (ENSNBRG00000011115)	ENSNBRG00000011089	NUP54 (ENSNBRG00000011049)	PPEF2 (ENSNBRG00000010997)	ENSNBRG00000010914	ENSNBRG00000010888	ENSNBRG00000010644	ENSNBRG00000010577	ENSNBRG00000010378	klhl8 (ENSNBRG00000010252)	sdad1 (ENSNBRG00000010180)	ptpn13 (ENSNBRG00000009786) #21	mapk10 (ENSNBRG00000009718) #22	ARHGAP24 (ENSNBRG00000009694) #23	esm1 (ENSNBRG00000009678)	ENSNBRG00000009663	ENSNBRG00000009636	ENSNBRG00000009615	ENSNBRG00000009570	ENSNBRG00000009548	HCN1 (ENSNBRG00000009519)	ccbe1 (ENSNBRG00000009471)	lman1 (ENSNBRG00000009426)	cplx4a (ENSNBRG00000009405)	rx3 (ENSNBRG00000009380)	ENSNBRG00000009366	ZNF532 (ENSNBRG00000009339)	ENSNBRG00000009291
Nile tilapia	MODERN SPECIES	19	RXFP3 (ENSONIG00000020761)	slc45a2 (ENSONIG00000007610)	amacr (ENSONIG00000007613)	ENSONIG00000007616	NUP54 (ENSONIG00000007623)	PPEF2 (ENSONIG00000007629)	gsdf (ENSONIG00000007633)	ENSONIG00000007636	ENSONIG00000036739	ENSONIG00000041607	ENSONIG00000039491	ENSONIG00000041175	klhl8 (ENSONIG00000007641)	sdad1 (ENSONIG00000007644)	ptpn13 (ENSONIG00000007651) #21	mapk10 (ENSONIG00000007660) #22	ARHGAP24 (ENSONIG00000007670) #23	esm1 (ENSONIG00000007673)	ENSONIG00000007675	ST6GALNAC6 (ENSONIG00000039487)	HCN1 (ENSONIG00000007678)	ccbe1 (ENSONIG00000007680)	ENSONIG00000032081	lman1 (ENSONIG00000007682)	cplx4a (ENSONIG00000007687)	rx3 (ENSONIG00000007688)	ENSONIG00000042960	znf532 (ENSONIG00000007691)	ENSONIG00000007693	ENSONIG00000038245	NEDD4L (ENSONIG00000007697)
Midas cichlid	MODERN SPECIES	649	npdc1a (ENSACIG00000021379)	ENSACIG00000021342	anxa3b (ENSACIG00000021229)	rcl1 (ENSACIG00000021195)	ENSACIG00000021144	ENSACIG00000021066	ENSACIG00000021054	ENSACIG00000021038	ENSACIG00000021030	ENSACIG00000020971	ENSACIG00000020956	klhl8 (ENSACIG00000020840)	ENSACIG00000020813	sdad1 (ENSACIG00000020772)	ptpn13 (ENSACIG00000020479) #21	mapk10 (ENSACIG00000020460) #22	ARHGAP24 (ENSACIG00000020445) #23	esm1 (ENSACIG00000020438)	ENSACIG00000020432	ENSACIG00000020426	ENSACIG00000020411	ENSACIG00000020395	ENSACIG00000020383	ENSACIG00000020369	HCN1 (ENSACIG00000020348)	ccbe1 (ENSACIG00000020332)	lman1 (ENSACIG00000020305)	cplx4a (ENSACIG00000020297)	rx3 (ENSACIG00000020290)	ENSACIG00000020281	ZNF532 (ENSACIG00000020254)
Pomacentridae	ANCESTRAL SPECIES	12	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.a.b.a.o	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00980000198667.b	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Bicolor damselfish	MODERN SPECIES	1412						ENSSPAG00000014639	ENSSPAG00000014649	ENSSPAG00000014662	ENSSPAG00000014677	ENSSPAG00000014699	ENSSPAG00000014713	klhl8 (ENSSPAG00000014730)	sdad1 (ENSSPAG00000014743)	ENSSPAG00000014799	ptpn13 (ENSSPAG00000014852) #21	mapk10 (ENSSPAG00000015443) #22	ARHGAP24 (ENSSPAG00000015551) #23
Pomacentridae_A	ANCESTRAL SPECIES	10	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.a.b.a.o	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00980000198667.b	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Amphiprion	ANCESTRAL SPECIES	5	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.a.b.a.o	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00980000198667.b	ENSGT00940000175984	ENSGT00940000166813.e.a	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340
Orange clownfish	MODERN SPECIES	7	NUP54 (ENSAPEG00000019016)	ENSAPEG00000018979	ENSAPEG00000018971	ENSAPEG00000018952	ENSAPEG00000018832	ENSAPEG00000018794	ENSAPEG00000018783	ENSAPEG00000018766	ENSAPEG00000018739	ENSAPEG00000018534	ENSAPEG00000018496	klhl8 (ENSAPEG00000018365)	ENSAPEG00000018349	sdad1 (ENSAPEG00000018290)	ptpn13 (ENSAPEG00000018051) #21	mapk10 (ENSAPEG00000017981) #22	ARHGAP24 (ENSAPEG00000017909) #23	ENSAPEG00000017860	esm1 (ENSAPEG00000017848)	ENSAPEG00000017830	ENSAPEG00000017813	ENSAPEG00000017797	ENSAPEG00000017787	ENSAPEG00000017766	ENSAPEG00000017739	ENSAPEG00000017727	HCN1 (ENSAPEG00000017675)	ccbe1 (ENSAPEG00000017603)	lman1 (ENSAPEG00000017552)	cplx4a (ENSAPEG00000017497)	rx3 (ENSAPEG00000017487)
Clown anemonefish	MODERN SPECIES	1506				ENSAOCG00000020585	NUP54 (ENSAOCG00000020529)	PPEF2 (ENSAOCG00000020480)	ENSAOCG00000020307	ENSAOCG00000020283	ENSAOCG00000020238	ENSAOCG00000020025	ENSAOCG00000019946	klhl8 (ENSAOCG00000019777)	sdad1 (ENSAOCG00000019765)	ENSAOCG00000019743	ptpn13 (ENSAOCG00000001433) #21	mapk10 (ENSAOCG00000019529) #22	ARHGAP24 (ENSAOCG00000019495) #23	esm1 (ENSAOCG00000019429)	ENSAOCG00000019408	ENSAOCG00000019393	ENSAOCG00000019368	ENSAOCG00000002275
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	302											ENSAPOG00000023554	ENSAPOG00000023478	klhl8 (ENSAPOG00000023461)	sdad1 (ENSAPOG00000023411)	ptpn13 (ENSAPOG00000023266) #21	mapk10 (ENSAPOG00000022997) #22	dbnlb (ENSAPOG00000022968)	ube2d4 (ENSAPOG00000022914)	TCF7L1 (ENSAPOG00000022882)	ENSAPOG00000022834	zgc:153044 (ENSAPOG00000022817)	MN1 (ENSAPOG00000022807)	ENSAPOG00000022799
Spiny chromis	MODERN SPECIES	1066															ENSAPOG00000002686	mapk10 (ENSAPOG00000002720) #22	ARHGAP24 (ENSAPOG00000002759) #23	esm1 (ENSAPOG00000002777)	ENSAPOG00000002788	ENSAPOG00000002797	ENSAPOG00000002808	ENSAPOG00000002851	NUP54 (ENSAPOG00000002905)	PPEF2 (ENSAPOG00000002954)	ENSAPOG00000002970	ENSAPOG00000002994
Atherinomorphae	ANCESTRAL SPECIES	17	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000175984	ENSGT00940000177441	ENSGT00980000198667	ENSGT00940000171177	ENSGT00940000169428	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838
Oryzias	ANCESTRAL SPECIES	9	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01050000244842.a.b.a.o	ENSGT00940000166846	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000175984	ENSGT00940000177441	ENSGT00980000198667	ENSGT00940000171177	ENSGT00940000169428	ENSGT00940000155907.b.b	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467
Oryzias_b	ANCESTRAL SPECIES	4	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000157583	ENSGT01050000244842.a.a.b.b.b.h.b.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000166846	ENSGT00980000198774	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000175984	ENSGT00940000177441	ENSGT00980000198667	ENSGT00940000171177	ENSGT00940000169428	ENSGT00940000155907.b.b	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467
Indian medaka	MODERN SPECIES	30	amacr (ENSOMEG00000005399)	ENSOMEG00000005437	ENSOMEG00000005463	NUP54 (ENSOMEG00000005535)	PPEF2 (ENSOMEG00000005717)	ENSOMEG00000005758	ENSOMEG00000005799	ENSOMEG00000005815	ENSOMEG00000005880	ENSOMEG00000005945	ENSOMEG00000006031	ENSOMEG00000006192	ENSOMEG00000006243	sdad1 (ENSOMEG00000006303)	ptpn13 (ENSOMEG00000006701) #21	mapk10 (ENSOMEG00000006819) #22	ARHGAP24 (ENSOMEG00000006848) #23	esm1 (ENSOMEG00000006870)	ENSOMEG00000006882	ENSOMEG00000006908	ENSOMEG00000006924	ENSOMEG00000006942	HCN1 (ENSOMEG00000007011)	ccbe1 (ENSOMEG00000007041)	lman1 (ENSOMEG00000007069)	cplx4a (ENSOMEG00000007085)	rx3 (ENSOMEG00000007096)	ZNF532 (ENSOMEG00000007130)	ENSOMEG00000007194	NEDD4L (ENSOMEG00000007465)	ENSOMEG00000007554
Javanese ricefish	MODERN SPECIES	3	RXFP3 (ENSOJAG00000016945)	slc45a2 (ENSOJAG00000016967)	amacr (ENSOJAG00000016991)	ENSOJAG00000017032	NUP54 (ENSOJAG00000017468)	PPEF2 (ENSOJAG00000017551)	ENSOJAG00000017621	ENSOJAG00000017632	ENSOJAG00000017708	ENSOJAG00000017831	ENSOJAG00000017938	klhl8 (ENSOJAG00000017987)	ENSOJAG00000018058	sdad1 (ENSOJAG00000018079)	ptpn13 (ENSOJAG00000018190) #21	mapk10 (ENSOJAG00000018360) #22	ARHGAP24 (ENSOJAG00000019153) #23	esm1 (ENSOJAG00000001649)	HCN1 (ENSOJAG00000002295)	ccbe1 (ENSOJAG00000002321)	lman1 (ENSOJAG00000002404)	cplx4a (ENSOJAG00000002564)	rx3 (ENSOJAG00000002573)	ENSOJAG00000002583	ZNF532 (ENSOJAG00000002605)	ENSOJAG00000002678	NEDD4L (ENSOJAG00000002763)	ENSOJAG00000003111	PRLR (ENSOJAG00000003119)	agxt2 (ENSOJAG00000003229)	dnajc21 (ENSOJAG00000003561)
Oryzias_a	ANCESTRAL SPECIES	12	ENSGT00940000160508	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.a.b.a.o	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00980000198774	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000175984	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Chinese medaka	MODERN SPECIES	57	RXFP3 (ENSOSIG00000008446)	slc45a2 (ENSOSIG00000008448)	amacr (ENSOSIG00000008449)	ENSOSIG00000008455	NUP54 (ENSOSIG00000008460)	PPEF2 (ENSOSIG00000008530)	ENSOSIG00000008537	ENSOSIG00000008539	ENSOSIG00000008544	ENSOSIG00000008556	ENSOSIG00000008595	klhl8 (ENSOSIG00000008599)	sdad1 (ENSOSIG00000008615)	ENSOSIG00000011667	ptpn13 (ENSOSIG00000011668) #21	mapk10 (ENSOSIG00000011683) #22	ARHGAP24 (ENSOSIG00000014853) #23	esm1 (ENSOSIG00000014856)	ENSOSIG00000014865	HCN1 (ENSOSIG00000015795)	ccbe1 (ENSOSIG00000015797)	lman1 (ENSOSIG00000015799)	ENSOSIG00000015811	cplx4a (ENSOSIG00000015814)	lman1 (ENSOSIG00000015818)	rx3 (ENSOSIG00000015822)	ENSOSIG00000015825	ZNF532 (ENSOSIG00000015829)	ENSOSIG00000015935	ENSOSIG00000015937	NEDD4L (ENSOSIG00000015970)
Japanese Medaka HdrR	MODERN SPECIES	3	ENSORLG00000027997	fam78ab (ENSORLG00000029552)	PLPP7 (ENSORLG00000006551)	gng10 (ENSORLG00000025000)	btc (ENSORLG00000006542)	RXFP3 (ENSORLG00000006539)	slc45a2 (ENSORLG00000006533)	amacr (ENSORLG00000006510)	ENSORLG00000006491	NUP54 (ENSORLG00000006473)	PPEF2 (ENSORLG00000006451)	gsdf (ENSORLG00000022492)	ENSORLG00000023789	ENSORLG00000006428	ptpn13 (ENSORLG00000006294) #21	mapk10 (ENSORLG00000006276) #22	ARHGAP24 (ENSORLG00000006238) #23	esm1 (ENSORLG00000006155)	ENSORLG00000026760	ENSORLG00000030533	ENSORLG00000024824	ENSORLG00000022991	ENSORLG00000026831	HCN1 (ENSORLG00000006104)	ccbe1 (ENSORLG00000006082)	lman1 (ENSORLG00000006066)	cplx4a (ENSORLG00000021868)	rx3 (ENSORLG00000027320)	ENSORLG00000026115	ZNF532 (ENSORLG00000006018)	ENSORLG00000005993
Cyprinodontiformes	ANCESTRAL SPECIES	16	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.a
Cyprinodontoidei	ANCESTRAL SPECIES	16	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00510000047097	ENSGT00940000156125.h.a
Poeciliinae	ANCESTRAL SPECIES	12	ENSGT00950000182914.a.b	ENSGT00940000157215.g	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a.b	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b.t	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00510000047097	ENSGT00940000156125.h.a
Poecilia	ANCESTRAL SPECIES	12	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215.g	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a.b	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000177777	ENSGT01100000263568.b.b.t	ENSGT01050000244842.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00510000047097	ENSGT00940000156125.h.a
NAME_6	ANCESTRAL SPECIES	13	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215.g	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a.b	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01100000263568.a	ENSGT01100000263568.b.b.t	ENSGT01050000244842.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810.c	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00510000047097	ENSGT00940000156125.h.a
Amazon molly	MODERN SPECIES	351	gng10 (ENSPFOG00000003863)	ENSPFOG00000003878	rxfp3 (ENSPFOG00000019916)	slc45a2 (ENSPFOG00000003919)	amacr (ENSPFOG00000004080)	ENSPFOG00000021729	ENSPFOG00000004137	PPEF2 (ENSPFOG00000004332)	ENSPFOG00000004522	ENSPFOG00000019917	ENSPFOG00000004581	ENSPFOG00000004631	klhl8 (ENSPFOG00000004995)	sdad1 (ENSPFOG00000005262)	ptpn13 (ENSPFOG00000005502) #21	mapk10 (ENSPFOG00000005841) #22	ARHGAP24 (ENSPFOG00000006070) #23	esm1 (ENSPFOG00000006283)	ENSPFOG00000006327	HCN1 (ENSPFOG00000007002)	ccbe1 (ENSPFOG00000007148)	lman1 (ENSPFOG00000007261)	cplx4a (ENSPFOG00000007526)	rx3 (ENSPFOG00000007546)	ENSPFOG00000024005	ZNF532 (ENSPFOG00000007573)	ENSPFOG00000007660	ENSPFOG00000024675	NEDD4L (ENSPFOG00000007816)	dnajc21 (ENSPFOG00000008317)	agxt2 (ENSPFOG00000008397)
Sailfin molly	MODERN SPECIES	1027	cacng7a (ENSPLAG00000012696)	ENSPLAG00000012704	ENSPLAG00000012717	NUP54 (ENSPLAG00000012738)	PPEF2 (ENSPLAG00000012886)	ENSPLAG00000012903	ENSPLAG00000012910	ENSPLAG00000012921	ENSPLAG00000012947	ENSPLAG00000012955	ENSPLAG00000013013	ENSPLAG00000013035	klhl8 (ENSPLAG00000000304)	sdad1 (ENSPLAG00000013139)	ptpn13 (ENSPLAG00000013176) #21	mapk10 (ENSPLAG00000013212) #22	ARHGAP24 (ENSPLAG00000013228) #23
Guppy	MODERN SPECIES	442	BRCC3 (ENSPREG00000019635)	ENSPREG00000019622	ENSPREG00000019605	ENSPREG00000019560	ENSPREG00000019540	ENSPREG00000019478	KCNV2 (ENSPREG00000019446)	ENSPREG00000019435	ENSPREG00000019421	ENSPREG00000019410	ENSPREG00000019397	ENSPREG00000019389	ENSPREG00000019378	sdad1 (ENSPREG00000019315)	ptpn13 (ENSPREG00000018902) #21	mapk10 (ENSPREG00000018715) #22	ARHGAP24 (ENSPREG00000018670) #23	esm1 (ENSPREG00000018655)	ENSPREG00000018250	HCN1 (ENSPREG00000018137)	ccbe1 (ENSPREG00000018088)	lman1 (ENSPREG00000018048)	cplx4a (ENSPREG00000018029)	rx3 (ENSPREG00000018023)	ENSPREG00000018015	ZNF532 (ENSPREG00000017987)	ENSPREG00000017960	ENSPREG00000017934	NEDD4L (ENSPREG00000017655)	dnajc21 (ENSPREG00000017568)	agxt2 (ENSPREG00000017521)
Platyfish	MODERN SPECIES	22	amacr (ENSXMAG00000023371)	ENSXMAG00000024885	NUP54 (ENSXMAG00000004684)	PPEF2 (ENSXMAG00000004670)	ENSXMAG00000029035	ENSXMAG00000025988	ENSXMAG00000004657	ENSXMAG00000020849	ENSXMAG00000024743	ENSXMAG00000021501	ENSXMAG00000028428	klhl8 (ENSXMAG00000004597)	sdad1 (ENSXMAG00000004554)	ptpn13 (ENSXMAG00000004518) #21	ENSXMAG00000025115	mapk10 (ENSXMAG00000004480) #22	ARHGAP24 (ENSXMAG00000004469) #23	esm1 (ENSXMAG00000004465)	ENSXMAG00000025991	ENSXMAG00000028097	ENSXMAG00000029451	ENSXMAG00000022035	ENSXMAG00000027578	HCN1 (ENSXMAG00000004418)	ccbe1 (ENSXMAG00000026845)	lman1 (ENSXMAG00000004398)	cplx4a (ENSXMAG00000029481)	rx3 (ENSXMAG00000004387)	ENSXMAG00000024601	ZNF532 (ENSXMAG00000027242)	ENSXMAG00000004376
NAME_4	ANCESTRAL SPECIES		ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT01100000263568.b.b	ENSGT01100000263473.a.b.h.b	ENSGT00940000163153	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.f	ENSGT00940000175984	ENSGT00940000158207.u	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00510000047097
Sheepshead minnow	MODERN SPECIES	246	ENSCVAG00000015404	ENSCVAG00000015472	NUP54 (ENSCVAG00000015484)	PPEF2 (ENSCVAG00000015592)	ENSCVAG00000015611	ENSCVAG00000015626	ENSCVAG00000015651	ENSCVAG00000015662	ENSCVAG00000000407	ENSCVAG00000015948	ENSCVAG00000016018	klhl8 (ENSCVAG00000016052)	ENSCVAG00000016068	sdad1 (ENSCVAG00000016081)	ptpn13 (ENSCVAG00000016208) #21	mapk10 (ENSCVAG00000016276) #22	ARHGAP24 (ENSCVAG00000016301) #23	esm1 (ENSCVAG00000016309)	ENSCVAG00000016322	ENSCVAG00000016328	ENSCVAG00000016347	HCN1 (ENSCVAG00000016366)	ccbe1 (ENSCVAG00000016372)	lman1 (ENSCVAG00000016425)	cplx4a (ENSCVAG00000016437)	rx3 (ENSCVAG00000016444)	ENSCVAG00000016454	ZNF532 (ENSCVAG00000016476)	ENSCVAG00000016589	ENSCVAG00000016600	NEDD4L (ENSCVAG00000016725)
Mummichog	MODERN SPECIES	2435	slc45a2 (ENSFHEG00000003191)	amacr (ENSFHEG00000003200)	ENSFHEG00000003220	nup54 (ENSFHEG00000003258)	PPEF2 (ENSFHEG00000003461)	ENSFHEG00000003502	ENSFHEG00000003521	ENSFHEG00000003712	ENSFHEG00000003737	ENSFHEG00000003756	ENSFHEG00000003844	klhl8 (ENSFHEG00000003896)	ENSFHEG00000003913	sdad1 (ENSFHEG00000003982)	ptpn13 (ENSFHEG00000004075) #21	mapk10 (ENSFHEG00000004109) #22	ARHGAP24 (ENSFHEG00000004149) #23	esm1 (ENSFHEG00000004166)
Aplocheiloidei	ANCESTRAL SPECIES	5	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.b	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000163153	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.e.b	ENSGT00940000166813.f	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b
Turquoise killifish	MODERN SPECIES	1611	DHX29 (ENSNFUG00015003497)	SKIV2L2 (ENSNFUG00015003132)	PLPP1 (ENSNFUG00015003034)	ENSNFUG00015003017	ENSNFUG00015003008	ENSNFUG00015002996	ENSNFUG00015002984	klhl8 (ENSNFUG00015002921)	SDAD1 (ENSNFUG00015002840)	CR847950.4 (ENSNFUG00015002811)	ptpn13 (ENSNFUG00015002754) #21	ENSNFUG00015002701	SSR1 (ENSNFUG00015002672)	cavin4b (ENSNFUG00015002665)	TMEFF1A (ENSNFUG00015002655)	mapk10 (ENSNFUG00015002440) #22	ARHGAP24 (ENSNFUG00015002372) #23	esm1 (ENSNFUG00015002354)	ENSNFUG00015001989	ENSNFUG00015001885	HCN1 (ENSNFUG00015001855)	ENSNFUG00015001844	ccbe1 (ENSNFUG00015001835)	lman1 (ENSNFUG00015001681)	CPLX4 (ENSNFUG00015001628)	RX3 (ENSNFUG00015001622)	ZNF532 (ENSNFUG00015001612)	OACYL (ENSNFUG00015001601)	ENSNFUG00015001580	NEDD4L (ENSNFUG00015001291)	prlra (ENSNFUG00015001210)
Mangrove rivulus	MODERN SPECIES	9	amacr (ENSKMAG00000012862)	ENSKMAG00000012880	ENSKMAG00000012898	NUP54 (ENSKMAG00000012979)	ENSKMAG00000013067	ENSKMAG00000013092	ENSKMAG00000013113	ENSKMAG00000013189	ENSKMAG00000013282	ENSKMAG00000013318	ENSKMAG00000013388	ENSKMAG00000013521	klhl8 (ENSKMAG00000013559)	sdad1 (ENSKMAG00000013601)	ptpn13 (ENSKMAG00000013642) #21	mapk10 (ENSKMAG00000013746) #22	ARHGAP24 (ENSKMAG00000013802) #23	esm1 (ENSKMAG00000013854)	ENSKMAG00000013867	ENSKMAG00000013880	ENSKMAG00000013905	ENSKMAG00000013914	HCN1 (ENSKMAG00000013979)	ccbe1 (ENSKMAG00000014032)	lman1 (ENSKMAG00000014106)	cplx4a (ENSKMAG00000014150)	rx3 (ENSKMAG00000014163)	ENSKMAG00000014181	ZNF532 (ENSKMAG00000014212)	ENSKMAG00000014231	ENSKMAG00000014263
Percomorphaceae_C	ANCESTRAL SPECIES	17	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01050000244842.a.b.a.o	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT01100000263568.b.b	ENSGT00940000179097	ENSGT01100000263568.a	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Percomorphaceae_D	ANCESTRAL SPECIES	15	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT00940000178135	ENSGT01050000244842.a.b.a.o	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT01100000263568.b.b	ENSGT00940000179097	ENSGT01100000263568.a	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Anabantaria	ANCESTRAL SPECIES	12	ENSGT01030000234518.B.a.a.c	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT00940000179097	ENSGT01050000244842.b	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Zig-zag eel	MODERN SPECIES	3	ENSMAMG00000016660	amacr (ENSMAMG00000016638)	ENSMAMG00000016612	ENSMAMG00000016580	ENSMAMG00000016491	ENSMAMG00000016288	ENSMAMG00000016189	ENSMAMG00000016249	ENSMAMG00000016041	ENSMAMG00000027972	ENSMAMG00000024419	ENSMAMG00000015712	ENSMAMG00000015699	sdad1 (ENSMAMG00000015681)	ptpn13 (ENSMAMG00000015645) #21	mapk10 (ENSMAMG00000015614) #22	ARHGAP24 (ENSMAMG00000015576) #23	esm1 (ENSMAMG00000015564)	ENSMAMG00000025475	ENSMAMG00000015450	ccbe1 (ENSMAMG00000015420)	lman1 (ENSMAMG00000015376)	cplx4a (ENSMAMG00000015349)	rx3 (ENSMAMG00000015314)	ENSMAMG00000015310	ENSMAMG00000015278	ENSMAMG00000015212	ENSMAMG00000025369	ENSMAMG00000015119	prlra (ENSMAMG00000015095)	agxt2 (ENSMAMG00000015059)
Anabantoidei	ANCESTRAL SPECIES	16	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.a.b.a.o	ENSGT00940000166846	ENSGT01100000263473.a.b.h.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT01030000236697	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.a	ENSGT00940000169948
Climbing perch	MODERN SPECIES	3	ENSATEG00000015325	AMACR (ENSATEG00000015348)	ENSATEG00000015372	ENSATEG00000015392	ENSATEG00000015422	ENSATEG00000015530	ENSATEG00000028507	ENSATEG00000026745	ENSATEG00000026917	ENSATEG00000015584	ENSATEG00000027707	ENSATEG00000015760	ENSATEG00000015793	sdad1 (ENSATEG00000015811)	ptpn13 (ENSATEG00000015924) #21	mapk10 (ENSATEG00000016053) #22	ARHGAP24 (ENSATEG00000016079) #23	esm1 (ENSATEG00000025709)	ENSATEG00000029182	ENSATEG00000016266	ccbe1 (ENSATEG00000016304)	lman1 (ENSATEG00000016318)	cplx4a (ENSATEG00000016364)	rx3 (ENSATEG00000016399)	ENSATEG00000016420	ENSATEG00000016429	ENSATEG00000016445	ENSATEG00000027572	ENSATEG00000016482	prlra (ENSATEG00000016539)	agxt2 (ENSATEG00000016554)
Siamese fighting fish	MODERN SPECIES	3	RXFP3 (ENSBSLG00000011179)	slc45a2 (ENSBSLG00000011169)	amacr (ENSBSLG00000011156)	ENSBSLG00000011118	NUP54 (ENSBSLG00000011087)	PPEF2 (ENSBSLG00000011030)	ENSBSLG00000010891	ENSBSLG00000010794	ENSBSLG00000010552	ENSBSLG00000010549	ENSBSLG00000010543	ENSBSLG00000010542	klhl8 (ENSBSLG00000010517)	sdad1 (ENSBSLG00000010303)	ptpn13 (ENSBSLG00000010176) #21	mapk10 (ENSBSLG00000009592) #22	ARHGAP24 (ENSBSLG00000009523) #23	esm1 (ENSBSLG00000009513)	ENSBSLG00000008648	HCN1 (ENSBSLG00000008502)	ccbe1 (ENSBSLG00000008474)	lman1 (ENSBSLG00000007851)	cplx4a (ENSBSLG00000007706)	rx3 (ENSBSLG00000007705)	ENSBSLG00000007702	ZNF532 (ENSBSLG00000007692)	ENSBSLG00000007685	NEDD4L (ENSBSLG00000007267)	prlra (ENSBSLG00000007235)	agxt2 (ENSBSLG00000007207)	dnajc21 (ENSBSLG00000007194)
Carangaria	ANCESTRAL SPECIES	17	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT01100000263473.a.b.h.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Carangaria_A	ANCESTRAL SPECIES	18	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT01100000263473.a.b.h.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Seriola	ANCESTRAL SPECIES	19	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01030000234575.c.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b.a
Greater amberjack	MODERN SPECIES	140								ENSSDUG00000017743	ENSSDUG00000017734	ENSSDUG00000017727	ENSSDUG00000017612	ENSSDUG00000017584	klhl8 (ENSSDUG00000017411)	sdad1 (ENSSDUG00000017358)	ptpn13 (ENSSDUG00000016952) #21	mapk10 (ENSSDUG00000016864) #22	ARHGAP24 (ENSSDUG00000016798) #23	esm1 (ENSSDUG00000016777)	ENSSDUG00000016764	ENSSDUG00000016757	ENSSDUG00000016739	ENSSDUG00000016729	HCN1 (ENSSDUG00000016712)	ccbe1 (ENSSDUG00000016676)	lman1 (ENSSDUG00000016636)	cplx4a (ENSSDUG00000016619)	rx3 (ENSSDUG00000016611)	ENSSDUG00000016602	ZNF532 (ENSSDUG00000016581)	ENSSDUG00000016553	ENSSDUG00000016544
Yellowtail amberjack	MODERN SPECIES	2796	nxnl2 (ENSSLDG00000006558)	gng10 (ENSSLDG00000006573)	btc (ENSSLDG00000006590)	rxfp3 (ENSSLDG00000006597)	slc45a2 (ENSSLDG00000006611)	amacr (ENSSLDG00000006637)	ENSSLDG00000006654	NUP54 (ENSSLDG00000006711)	PPEF2 (ENSSLDG00000006778)	ENSSLDG00000006819	ENSSLDG00000006836	ENSSLDG00000006907	klhl8 (ENSSLDG00000007094)	sdad1 (ENSSLDG00000007157)	ptpn13 (ENSSLDG00000007337) #21	mapk10 (ENSSLDG00000007943) #22	ARHGAP24 (ENSSLDG00000008006) #23	esm1 (ENSSLDG00000008074)	ENSSLDG00000008088	ENSSLDG00000008107
Barramundi perch	MODERN SPECIES	101	gng10 (ENSLCAG00010003985)	btc (ENSLCAG00010003993)	rxfp3 (ENSLCAG00010003995)	slc45a2 (ENSLCAG00010003998)	amacr (ENSLCAG00010004001)	ENSLCAG00010004009	NUP54 (ENSLCAG00010004027)	PPEF2 (ENSLCAG00010004064)	ENSLCAG00010004070	ENSLCAG00010004072	ENSLCAG00010004079	ENSLCAG00010004088	klhl8 (ENSLCAG00010004117)	sdad1 (ENSLCAG00010004127)	ptpn13 (ENSLCAG00010004174) #21	mapk10 (ENSLCAG00010004236) #22	ARHGAP24 (ENSLCAG00010004455) #23	esm1 (ENSLCAG00010004500)	ENSLCAG00010004525	HCN1 (ENSLCAG00010004715)	ccbe1 (ENSLCAG00010004719)	lman1 (ENSLCAG00010004727)	cplx4a (ENSLCAG00010004734)	rx3 (ENSLCAG00010004736)	ENSLCAG00010004739	ZNF532 (ENSLCAG00010004748)	ENSLCAG00010004761	ENSLCAG00010004766	NEDD4L (ENSLCAG00010004815)	prlra (ENSLCAG00010004969)	agxt2 (ENSLCAG00010005028)
Pleuronectoidei	ANCESTRAL SPECIES	7	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT00940000163153	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Turbot	MODERN SPECIES	7	ENSSMAG00000007472	amacr (ENSSMAG00000023237)	ENSSMAG00000007404	ENSSMAG00000007325	ENSSMAG00000007140	ENSSMAG00000007112	ENSSMAG00000035910	ENSSMAG00000007062	ENSSMAG00000033100	ENSSMAG00000007051	ENSSMAG00000007033	ENSSMAG00000032138	ENSSMAG00000006984	sdad1 (ENSSMAG00000006936)	ptpn13 (ENSSMAG00000006723) #21	mapk10 (ENSSMAG00000006620) #22	ARHGAP24 (ENSSMAG00000006567) #23	esm1 (ENSSMAG00000006553)	ENSSMAG00000006439	ccbe1 (ENSSMAG00000006389)	lman1 (ENSSMAG00000006326)	cplx4a (ENSSMAG00000006319)	rx3 (ENSSMAG00000006310)	ENSSMAG00000006298	ENSSMAG00000006266	ENSSMAG00000006255	ENSSMAG00000006244	ENSSMAG00000006019	prlra (ENSSMAG00000005991)	agxt2 (ENSSMAG00000005959)	dnajc21 (ENSSMAG00000005935)
Tongue sole	MODERN SPECIES	5	PAX8 (ENSCSEG00000018528)	ARL3 (ENSCSEG00000018550)	wbp1 (ENSCSEG00000018558)	lman2la (ENSCSEG00000018564)	MTFP1 (ENSCSEG00000018575)	ENSCSEG00000018583	ENSCSEG00000018588	pappaa (ENSCSEG00000018594)	mtrex (ENSCSEG00000018621)	DHX29 (ENSCSEG00000018670)	ENSCSEG00000018688	sdad1 (ENSCSEG00000018706)	ENSCSEG00000018728 #21	ENSCSEG00000018738	ptpn13 (ENSCSEG00000018747) #21	mapk10 (ENSCSEG00000018779) #22	ARHGAP24 (ENSCSEG00000019542) #23	esm1 (ENSCSEG00000019558)	ENSCSEG00000019572	HCN1 (ENSCSEG00000019661)	ccbe1 (ENSCSEG00000019663)	lman1 (ENSCSEG00000019669)	cplx4a (ENSCSEG00000019682)	rx3 (ENSCSEG00000019689)	ENSCSEG00000019692	ZNF532 (ENSCSEG00000019696)	ENSCSEG00000019710	ENSCSEG00000019715	NEDD4L (ENSCSEG00000019723)	prlra (ENSCSEG00000019808)	agxt2 (ENSCSEG00000019812)
Eupercaria	ANCESTRAL SPECIES	13	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Tetraodontidae	ANCESTRAL SPECIES	19	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.g
Fugu	MODERN SPECIES	18	nxnl2 (ENSTRUG00000019822)	gng10 (ENSTRUG00000014507)	btc (ENSTRUG00000020141)	rxfp3 (ENSTRUG00000014489)	slc45a2 (ENSTRUG00000014435)	amacr (ENSTRUG00000014396)	ENSTRUG00000014301	NUP54 (ENSTRUG00000014227)	ENSTRUG00000028164	ENSTRUG00000014005	ENSTRUG00000027204	ENSTRUG00000024761	klhl8 (ENSTRUG00000013714)	sdad1 (ENSTRUG00000013494)	ptpn13 (ENSTRUG00000013202) #21	mapk10 (ENSTRUG00000013056) #22	ARHGAP24 (ENSTRUG00000012902) #23	esm1 (ENSTRUG00000012890)	ENSTRUG00000027869	HCN1 (ENSTRUG00000012625)	ccbe1 (ENSTRUG00000012531)	lman1 (ENSTRUG00000012409)	cplx4a (ENSTRUG00000025664)	rx3 (ENSTRUG00000012354)	ENSTRUG00000023822	ZNF532 (ENSTRUG00000012219)	ENSTRUG00000012177	ENSTRUG00000029859	NEDD4L (ENSTRUG00000011917)	prlra (ENSTRUG00000011821)	agxt2 (ENSTRUG00000011676)
Tetraodon	MODERN SPECIES	19	PLPP1 (ENSTNIG00000007546)	CSGALNACT1 (ENSTNIG00000007545)	nxnl2 (ENSTNIG00000007544)	btc (ENSTNIG00000007543)	slc45a2 (ENSTNIG00000007542)	amacr (ENSTNIG00000007541)	ENSTNIG00000007540	NUP54 (ENSTNIG00000007539)	PPEF2 (ENSTNIG00000007538)	ENSTNIG00000007537	ENSTNIG00000007536	ENSTNIG00000000737	klhl8 (ENSTNIG00000007535)	sdad1 (ENSTNIG00000007534)	ptpn13 (ENSTNIG00000007533) #21	mapk10 (ENSTNIG00000007532) #22	ARHGAP24 (ENSTNIG00000007531) #23	esm1 (ENSTNIG00000007530)	ENSTNIG00000007529	ENSTNIG00000001449	HCN1 (ENSTNIG00000007528)	ccbe1 (ENSTNIG00000007527)	lman1 (ENSTNIG00000007526)	rx3 (ENSTNIG00000007525)	ENSTNIG00000007524	ENSTNIG00000007523	ENSTNIG00000007522	NEDD4L (ENSTNIG00000007521)	nudt14 (ENSTNIG00000007520)	prlra (ENSTNIG00000001790)	agxt2 (ENSTNIG00000007519)
Eupecaria_A	ANCESTRAL SPECIES	14	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Ballan wrasse	MODERN SPECIES	189																mapk10 (ENSLBEG00000017081) #22	ARHGAP24 (ENSLBEG00000017197) #23	esm1 (ENSLBEG00000017238)	ENSLBEG00000017256	ENSLBEG00000017276	ENSLBEG00000017292	HCN1 (ENSLBEG00000017328)	ccbe1 (ENSLBEG00000017393)	lman1 (ENSLBEG00000017440)	cplx4a (ENSLBEG00000017489)	rx3 (ENSLBEG00000017507)	ENSLBEG00000017519	ZNF532 (ENSLBEG00000017544)	ENSLBEG00000017601	ENSLBEG00000017633	NEDD4L (ENSLBEG00000017685)
Eupecaria_B	ANCESTRAL SPECIES	14	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Eupecaria_C	ANCESTRAL SPECIES	9	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b.l	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT01030000236697	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	6	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b.l	ENSGT01050000244842.b	ENSGT00940000166846	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.b
European seabass	MODERN SPECIES	9	PLPP1 (ENSDLAG00005033711)	ENSDLAG00005029474	ENSDLAG00005012399	ENSDLAG00005012438	ENSDLAG00005033682	ENSDLAG00005012454	ENSDLAG00005012623	ENSDLAG00005012856	ENSDLAG00005013348	ENSDLAG00005013358	ENSDLAG00005013395	ENSDLAG00005013484	sdad1 (ENSDLAG00005013541)	ENSDLAG00005013613	ptpn13 (ENSDLAG00005013629) #21	mapk10 (ENSDLAG00005013846) #22	ARHGAP24 (ENSDLAG00005014135) #23	esm1 (ENSDLAG00005034902)	ENSDLAG00005014272	ENSDLAG00005015918	ccbe1 (ENSDLAG00005015956)	lman1 (ENSDLAG00005015980)	cplx4a (ENSDLAG00005016198)	rx3 (ENSDLAG00005016206)	ENSDLAG00005016222	ENSDLAG00005016226	ENSDLAG00005016255	ENSDLAG00005016313	ENSDLAG00005016377	prlra (ENSDLAG00005017496)	agxt2 (ENSDLAG00005017540)
Large yellow croaker	MODERN SPECIES	4	btc (ENSLCRG00005006500)	rxfp3 (ENSLCRG00005006499)	slc45a2 (ENSLCRG00005006497)	amacr (ENSLCRG00005006496)	ENSLCRG00005006495	NUP54 (ENSLCRG00005006332)	PPEF2 (ENSLCRG00005006322)	ENSLCRG00005006317	ENSLCRG00005006310	ENSLCRG00005006305	ENSLCRG00005006300	ENSLCRG00005006279	klhl8 (ENSLCRG00005006272)	sdad1 (ENSLCRG00005006261)	ptpn13 (ENSLCRG00005006249) #21	mapk10 (ENSLCRG00005005309) #22	ARHGAP24 (ENSLCRG00005005222) #23	esm1 (ENSLCRG00005005217)	ENSLCRG00005004960	HCN1 (ENSLCRG00005004918)	ccbe1 (ENSLCRG00005004915)	lman1 (ENSLCRG00005004893)	cplx4a (ENSLCRG00005004891)	rx3 (ENSLCRG00005004890)	ENSLCRG00005004889	ZNF532 (ENSLCRG00005004887)	ENSLCRG00005004885	ENSLCRG00005004883	NEDD4L (ENSLCRG00005004014)	prlra (ENSLCRG00005004001)	agxt2 (ENSLCRG00005003916)
Gilthead seabream	MODERN SPECIES	3	amacr (ENSSAUG00010009438)	ENSSAUG00010009440	ENSSAUG00010009442	NUP54 (ENSSAUG00010009452)	PPEF2 (ENSSAUG00010009855)	ENSSAUG00010009864	ENSSAUG00010009868	ENSSAUG00010009870	ENSSAUG00010009872	ENSSAUG00010009875	ENSSAUG00010009878	klhl8 (ENSSAUG00010009883)	sdad1 (ENSSAUG00010009962)	ENSSAUG00010009983	ptpn13 (ENSSAUG00010009995) #21	mapk10 (ENSSAUG00010010043) #22	ARHGAP24 (ENSSAUG00010010930) #23	esm1 (ENSSAUG00010010933)	ENSSAUG00010010936	HCN1 (ENSSAUG00010011253)	ccbe1 (ENSSAUG00010011262)	lman1 (ENSSAUG00010011264)	cplx4a (ENSSAUG00010011290)	rx3 (ENSSAUG00010011291)	ENSSAUG00010011292	ZNF532 (ENSSAUG00010011298)	ENSSAUG00010011398	ENSSAUG00010011402	NEDD4L (ENSSAUG00010011411)	prlra (ENSSAUG00010012906)	agxt2 (ENSSAUG00010012910)
Perciformes	ANCESTRAL SPECIES	16	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.a
Cottioidei	ANCESTRAL SPECIES	18	ENSGT01030000234518.B.a.a.c	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00390000000348	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT00940000181081	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.a
Lumpfish	MODERN SPECIES	3	slc45a2 (ENSCLMG00005022574)	amacr (ENSCLMG00005022575)	ENSCLMG00005022577	NUP54 (ENSCLMG00005022590)	PPEF2 (ENSCLMG00005022607)	ENSCLMG00005001380	ENSCLMG00005001854	ENSCLMG00005001858	ENSCLMG00005002020	ENSCLMG00005002022	ENSCLMG00005002030	ENSCLMG00005002048	klhl8 (ENSCLMG00005002054)	sdad1 (ENSCLMG00005002111)	ptpn13 (ENSCLMG00005002131) #21	mapk10 (ENSCLMG00005002363) #22	ARHGAP24 (ENSCLMG00005007974) #23	esm1 (ENSCLMG00005007977)	ENSCLMG00005007986	HCN1 (ENSCLMG00005008147)	ccbe1 (ENSCLMG00005008148)	lman1 (ENSCLMG00005008152)	cplx4a (ENSCLMG00005008360)	rx3 (ENSCLMG00005008362)	ENSCLMG00005008364	ZNF532 (ENSCLMG00005008366)	ENSCLMG00005008368	ENSCLMG00005008371	NEDD4L (ENSCLMG00005008380)	prlra (ENSCLMG00005008840)	agxt2 (ENSCLMG00005009409)
Stickleback	MODERN SPECIES	13	gng10 (ENSGACG00000016294)	rxfp3 (ENSGACG00000016296)	slc45a2 (ENSGACG00000016297)	amacr (ENSGACG00000016302)	ENSGACG00000016305	NUP54 (ENSGACG00000016308)	PPEF2 (ENSGACG00000016312)	ENSGACG00000016330	ENSGACG00000016331	ENSGACG00000016333	ENSGACG00000016345	ENSGACG00000016350	klhl8 (ENSGACG00000016351)	sdad1 (ENSGACG00000016369)	ptpn13 (ENSGACG00000016376) #21	mapk10 (ENSGACG00000016396) #22	ARHGAP24 (ENSGACG00000016403) #23	esm1 (ENSGACG00000016408)	ENSGACG00000016410	ccbe1 (ENSGACG00000016425)	lman1 (ENSGACG00000016429)	cplx4a (ENSGACG00000016445)	rx3 (ENSGACG00000016453)	ZNF532 (ENSGACG00000016456)	ENSGACG00000016460	NEDD4L (ENSGACG00000016463)	prlra (ENSGACG00000016473)	agxt2 (ENSGACG00000016477)	agxt2 (ENSGACG00000016478)	dnajc21 (ENSGACG00000016480)	C18orf32 (ENSGACG00000016486)
Perciformes_a	ANCESTRAL SPECIES	12	ENSGT01100000263525.a.a	ENSGT00940000160508	ENSGT01030000234534.B.a.a.a.b	ENSGT00950000182914.a.b	ENSGT00940000157215	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b	ENSGT00940000166467	ENSGT00650000094838	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125.h.a	ENSGT00510000047097
Channel bull blenny	MODERN SPECIES	3	mpx (ENSCGOG00000006138)	ENSCGOG00000006146	mpx (ENSCGOG00000006154)	loxa (ENSCGOG00000006286)	snx24 (ENSCGOG00000006291)	GGCX (ENSCGOG00000006332)	ENSCGOG00000006717	NUP54 (ENSCGOG00000006765)	PPEF2 (ENSCGOG00000006900)	ENSCGOG00000006904	ENSCGOG00000006908	ENSCGOG00000006916	klhl8 (ENSCGOG00000006942)	sdad1 (ENSCGOG00000007259)	ptpn13 (ENSCGOG00000007885) #21	mapk10 (ENSCGOG00000010208) #22	ARHGAP24 (ENSCGOG00000013901) #23	esm1 (ENSCGOG00000013904)	ENSCGOG00000013922	HCN1 (ENSCGOG00000014317)	ccbe1 (ENSCGOG00000014324)	lman1 (ENSCGOG00000014331)	cplx4a (ENSCGOG00000014391)	rx3 (ENSCGOG00000014396)	ENSCGOG00000014400	ZNF532 (ENSCGOG00000014409)	ENSCGOG00000014436	NEDD4L (ENSCGOG00000014460)	prlra (ENSCGOG00000014608)	aebp1a (ENSCGOG00000014813)	ddx56 (ENSCGOG00000014920)
Pike perch	MODERN SPECIES	33	amacr (ENSSLUG00000015078)	ENSSLUG00000015051	NUP54 (ENSSLUG00000014910)	PPEF2 (ENSSLUG00000014861)	ENSSLUG00000014846	ENSSLUG00000014837	ENSSLUG00000014833	ENSSLUG00000014823	ENSSLUG00000014801	ENSSLUG00000014794	ENSSLUG00000014789	klhl8 (ENSSLUG00000014502)	sdad1 (ENSSLUG00000014455)	ENSSLUG00000014446	ptpn13 (ENSSLUG00000014280) #21	mapk10 (ENSSLUG00000011456) #22	ARHGAP24 (ENSSLUG00000011295) #23	esm1 (ENSSLUG00000011281)	ENSSLUG00000010474	HCN1 (ENSSLUG00000010392)	ccbe1 (ENSSLUG00000010388)	lman1 (ENSSLUG00000010310)	cplx4a (ENSSLUG00000010295)	rx3 (ENSSLUG00000010289)	ENSSLUG00000010283	ZNF532 (ENSSLUG00000010271)	ENSSLUG00000010258	ENSSLUG00000010250	NEDD4L (ENSSLUG00000009719)	prlra (ENSSLUG00000009614)	agxt2 (ENSSLUG00000008845)
Otomorpha	ANCESTRAL SPECIES	17	ENSGT00940000153372.A.e.a.a	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00940000182167	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Clupeiformes	ANCESTRAL SPECIES	12	ENSGT01030000234618.E	ENSGT00940000156170	ENSGT00940000159129	ENSGT00940000167600	ENSGT01020000230359.E	ENSGT00940000157449	ENSGT00390000001566	ENSGT00390000008823	ENSGT00940000157321	ENSGT00940000156290.b	ENSGT01070000253744.b.b.f	ENSGT00940000154821.a.a	ENSGT00940000154886.a.b	ENSGT01050000244898.b.b.e.b	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.a.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Atlantic herring	MODERN SPECIES	3	txnl1 (ENSCHAG00000014836)	TCF4 (ENSCHAG00000014900)	ENSCHAG00000015409	acadl (ENSCHAG00000015439)	MPC2 (ENSCHAG00000015960)	RAB27B (ENSCHAG00000015976)	wdr91 (ENSCHAG00000016022)	zgc:152948 (ENSCHAG00000016082)	dck (ENSCHAG00000016094)	ENSCHAG00000016237	NPFFR2 (ENSCHAG00000018883)	ENSCHAG00000019237	ENSCHAG00000019248	mob1bb (ENSCHAG00000019337)	ptpn13 (ENSCHAG00000019401) #21	mapk10 (ENSCHAG00000020156) #22	ARHGAP24 (ENSCHAG00000021267) #23	esm1 (ENSCHAG00000021313)	ENSCHAG00000021333	HCN1 (ENSCHAG00000022418)	ccbe1 (ENSCHAG00000022450)	lman1 (ENSCHAG00000022472)	cplx4a (ENSCHAG00000022609)	rx3 (ENSCHAG00000022613)	ENSCHAG00000022622	ZNF532 (ENSCHAG00000022630)	ENSCHAG00000022637	ENSCHAG00000022649	NEDD4L (ENSCHAG00000022691)	prlra (ENSCHAG00000023363)	agxt2 (ENSCHAG00000023386)
Denticle herring	MODERN SPECIES	13	ENSDCDG00000035763	ENSDCDG00000035765	ENSDCDG00000035767	ENSDCDG00000035770	klhl8 (ENSDCDG00000035774)	RAB27B (ENSDCDG00000000191)	wdr91 (ENSDCDG00000000255)	zgc:152948 (ENSDCDG00000000319)	dck (ENSDCDG00000000331)	ENSDCDG00000000816	NPFFR2 (ENSDCDG00000002581)	ENSDCDG00000002586	ENSDCDG00000002589	mob1bb (ENSDCDG00000002594)	ptpn13 (ENSDCDG00000002672) #21	mapk10 (ENSDCDG00000004583) #22	ARHGAP24 (ENSDCDG00000007654) #23	esm1 (ENSDCDG00000007679)	HCN1 (ENSDCDG00000008944)	ccbe1 (ENSDCDG00000009103)	lman1 (ENSDCDG00000009173)	cplx4a (ENSDCDG00000009371)	rx3 (ENSDCDG00000009378)	ENSDCDG00000009386	ZNF532 (ENSDCDG00000009394)	ENSDCDG00000009408	ENSDCDG00000009425	NEDD4L (ENSDCDG00000009589)	prlra (ENSDCDG00000010864)	agxt2 (ENSDCDG00000010906)	dnajc21 (ENSDCDG00000012229)
Otophysi	ANCESTRAL SPECIES	200			ENSGT00390000014467	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00940000182167	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Cyprinoidei	ANCESTRAL SPECIES	36	ENSGT01050000244840.A.a.a.h.b	ENSGT01050000244840.A.a.a.h.a	ENSGT01050000244840.A.a.b.f	ENSGT00940000157194.d	ENSGT00940000157936	ENSGT00940000153391.c.b.a.j.a	ENSGT01060000248575.C	ENSGT00940000153391.c.b.a.j.b	ENSGT00940000157419	ENSGT00940000159990	ENSGT00940000156261	ENSGT00940000155152.e	ENSGT01060000253463	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	447	ENSGT01050000244840.A.a.a.h.b.c	ENSGT01050000244840.A.a.a.h.a.r	ENSGT01050000244840.A.a.b.f.m.b.a.a.b	ENSGT01050000244840.A.a.b.f.m.b.a.a.a	ENSGT01050000244840.A.a.b.f.n.b	ENSGT00940000157194.d.a	ENSGT00940000157936.o.b	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157419.v	ENSGT00940000159990.e	ENSGT00940000156261.gb	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000153232.b.h	ENSGT00390000010355.d	ENSGT00940000155133.b.u #21	ENSGT00940000153692.A.e #22	ENSGT00950000183015.D.k #23	ENSGT00390000018810.b
Goldfish	MODERN SPECIES	40	F2R (ENSCARG00000015381)	F2R (ENSCARG00000015385)	F2R (ENSCARG00000015398)	OLFML2A (ENSCARG00000015409)	nr6a1b (ENSCARG00000015425)	nr5a1b (ENSCARG00000015694)	psmb7 (ENSCARG00000015702)	NEK6 (ENSCARG00000015728)	DENND1A (ENSCARG00000015942)	CRB2 (ENSCARG00000016368)	ENSCARG00000016386	ENSCARG00000016392	ENSCARG00000016395	sdad1 (ENSCARG00000016405)	ptpn13 (ENSCARG00000016696) #21	mapk10 (ENSCARG00000017060) #22	ARHGAP24 (ENSCARG00000020380) #23	esm1 (ENSCARG00000020422)	ENSCARG00000020737	ENSCARG00000020811	ENSCARG00000020817	ENSCARG00000020820	rpl35 (ENSCARG00000020825)	uqcr10 (ENSCARG00000020832)	ENSCARG00000020838	CACFD1 (ENSCARG00000020842)	mob1bb (ENSCARG00000020849)	dck (ENSCARG00000020863)	SLC4A4 (ENSCARG00000021058)	fpgs (ENSCARG00000028768)	cdk9 (ENSCARG00000030843)
Cyprininae_a	ANCESTRAL SPECIES	81	ENSGT01050000244840.A.a.b.f.m.a.b.a	ENSGT01050000244840.A.a.b.f.m.b.a.a.b	ENSGT01050000244840.A.a.b.f.m.b.a.a.a	ENSGT01050000244840.A.a.b.f.n.b	ENSGT00940000157194.d.a	ENSGT00940000157936.o.b	ENSGT00940000153391.c.b.a.j.b.b	ENSGT00940000157419.v	ENSGT00940000159990.f	ENSGT00940000158821.r.b	ENSGT00940000156261.gb	ENSGT00950000183101.a.b.b.a.b	ENSGT00940000153232.b.h	ENSGT00390000010355.d	ENSGT00940000155133.b.u #21	ENSGT00940000153692.A.e #22	ENSGT00950000183015.D.k #23	ENSGT00390000018810.b	ENSGT00940000166813	ENSGT00940000158207.t	ENSGT00390000014907.B.a	ENSGT00940000159146.b	ENSGT00950000182938.b.b.b.b.b.b.i.b.b.b.a	ENSGT00940000166467.b	ENSGT00940000174898.b	ENSGT00940000154437.h.a	ENSGT00940000160524.e	ENSGT00940000156873.d	ENSGT00940000154851.B.b.a	ENSGT00940000156125.f	ENSGT00510000047097.a
Common carp reference	MODERN SPECIES	38	F2R (ENSCCRG00000077171)	F2R (ENSCCRG00000059546)	ENSCCRG00000074926	nr6a1b (ENSCCRG00000041881)	nr5a1b (ENSCCRG00000016558)	NEK6 (ENSCCRG00000046205)	psmb7 (ENSCCRG00000074098)	lhx2a (ENSCCRG00000046488)	ENSCCRG00000023193	ENSCCRG00000023239	ENSCCRG00000023244	ENSCCRG00000054544	ENSCCRG00000077647	sdad1 (ENSCCRG00000052504)	ptpn13 (ENSCCRG00000004583) #21	mapk10 (ENSCCRG00000002559) #22	ARHGAP24 (ENSCCRG00000004310) #23	esm1 (ENSCCRG00000011343)	ENSCCRG00000071047	ENSCCRG00000072830	ccbe1 (ENSCCRG00000031028)	lman1 (ENSCCRG00000013306)	CPLX4 (ENSCCRG00000013016)	rx3 (ENSCCRG00000013148)	ENSCCRG00000058820	ENSCCRG00000013052	ENSCCRG00000069165	ENSCCRG00000001203	dnajc21 (ENSCCRG00000002931)	prlra (ENSCCRG00000057475)	agxt2 (ENSCCRG00000071142)
Golden-line barbel	MODERN SPECIES	60	f2rl1.1 (ENSSGRG00000051772)	F2R (ENSSGRG00000051770)	F2R (ENSSGRG00000051769)	F2R (ENSSGRG00000051768)	OLFML2A (ENSSGRG00000051767)	nr6a1b (ENSSGRG00000051757)	nr5a1b (ENSSGRG00000051754)	psmb7 (ENSSGRG00000051638)	NEK6 (ENSSGRG00000051636)	lhx2a (ENSSGRG00000051632)	DENND1A (ENSSGRG00000051566)	CRB2 (ENSSGRG00000051557)	ENSSGRG00000051556	sdad1 (ENSSGRG00000051393)	ptpn13 (ENSSGRG00000051041) #21	mapk10 (ENSSGRG00000049430) #22	ENSSGRG00000049372	ARHGAP24 (ENSSGRG00000049340) #23	esm1 (ENSSGRG00000049337)	ENSSGRG00000049334	HCN1 (ENSSGRG00000049327)	ccbe1 (ENSSGRG00000049325)	lman1 (ENSSGRG00000049273)	cplx4a (ENSSGRG00000049272)	rx3 (ENSSGRG00000049271)	ENSSGRG00000049270	ENSSGRG00000049269	ENSSGRG00000049267	NEDD4L (ENSSGRG00000049075)	prlra (ENSSGRG00000049073)	prlra (ENSSGRG00000049072)
Cyprininae	ANCESTRAL SPECIES	138	ENSGT01050000244840.A.a.b.f.m.a.a.b	ENSGT01050000244840.A.a.b.f.n.a	ENSGT00940000157194.d.b	ENSGT00940000157936.o.a	ENSGT00940000153391.c.b.a.j.b.a	ENSGT00940000157419.u	ENSGT00940000159990.f	ENSGT00940000158821.r.b	ENSGT00940000158821.r.a	ENSGT00940000156261.fb	ENSGT00940000155152.e	ENSGT00940000160615.a.b	ENSGT00940000153232.b.g	ENSGT00390000010355.c	ENSGT00940000155133.b.v #21	ENSGT00940000153692.A.f #22	ENSGT00950000183015.D.l #23	ENSGT00390000018810.a	ENSGT00940000166813	ENSGT00940000158207.t	ENSGT00390000014907.B.a	ENSGT00940000159146.b	ENSGT00950000182938.b.b.b.b.b.b.i.b.b.b.a	ENSGT00940000158207.s	ENSGT00390000014907.B.b	ENSGT00940000159146.a	ENSGT00950000182938.b.b.b.b.b.b.i.b.b.b.b	ENSGT00940000166467.a	ENSGT00940000174898.a	ENSGT00940000154437.h.b	ENSGT00530000063340
Goldfish	MODERN SPECIES	13	lhx2a (ENSCARG00000013150)	DENND1A (ENSCARG00000013107)	ENSCARG00000013086	hm13 (ENSCARG00000012660)	ENSCARG00000012638	ENSCARG00000012631	ENSCARG00000012628	col9a3 (ENSCARG00000012611)	kcnk15 (ENSCARG00000012606)	lsm14b (ENSCARG00000012598)	ENSCARG00000012596	ENSCARG00000012594	l1camb (ENSCARG00000012503)	ENSCARG00000012481	ptpn13 (ENSCARG00000012052) #21	mapk10 (ENSCARG00000011799) #22	ARHGAP24 (ENSCARG00000011742) #23	esm1 (ENSCARG00000011735)	ENSCARG00000010532	HCN1 (ENSCARG00000010507)	ccbe1 (ENSCARG00000010501)	lman1 (ENSCARG00000010333)	cplx4a (ENSCARG00000010306)	rx3 (ENSCARG00000010293)	ENSCARG00000010277	ENSCARG00000010258	ENSCARG00000010243	ENSCARG00000010224	NEDD4L (ENSCARG00000009894)	prlra (ENSCARG00000009848)	agxt2 (ENSCARG00000009603)
Cyprininae_a	ANCESTRAL SPECIES	44												ENSGT00940000160615.a.b	ENSGT00940000153232.b.g	ENSGT00390000010355.c	ENSGT00940000155133.b.v #21	ENSGT00940000153692.A.f #22	ENSGT00950000183015.D.l #23	ENSGT00390000018810.a	ENSGT00940000158207.s	ENSGT00390000014907.B.b	ENSGT00940000159146.a	ENSGT00950000182938.b.b.b.b.b.b.i.b.b.a	ENSGT00940000166467.a	ENSGT00940000174898.a	ENSGT00940000154437.h.b	ENSGT00530000063340	ENSGT00940000160524.f	ENSGT00940000156873.c	ENSGT00940000154851.B.b.b	ENSGT00940000156125.e	ENSGT00510000047097.b
Common carp reference	MODERN SPECIES	45	ENSCCRG00000066924	ENSCCRG00000046911	ENSCCRG00000043469	ENSCCRG00000016518	ENSCCRG00000050743	nr6a1b (ENSCCRG00000051533)	nr5a1b (ENSCCRG00000025089)	psmb7 (ENSCCRG00000046505)	NEK6 (ENSCCRG00000054124)	lhx2a (ENSCCRG00000042585)	DENND1A (ENSCCRG00000068812)	crb2a (ENSCCRG00000023226)	ENSCCRG00000034735	sdad1 (ENSCCRG00000011377)	ptpn13 (ENSCCRG00000011159) #21	mapk10 (ENSCCRG00000057165) #22	ARHGAP24 (ENSCCRG00000004528) #23	esm1 (ENSCCRG00000004302)	ENSCCRG00000080667	ENSCCRG00000057838	ccbe1 (ENSCCRG00000049368)	lman1 (ENSCCRG00000037303)	cplx4a (ENSCCRG00000079292)	rx3 (ENSCCRG00000013023)	ENSCCRG00000013032	ENSCCRG00000054549	ENSCCRG00000058190	ENSCCRG00000074082	ENSCCRG00000009828	prlra (ENSCCRG00000032938)	agxt2 (ENSCCRG00000032948)
Golden-line barbel	MODERN SPECIES	997														sdad1 (ENSSGRG00000034026)	ptpn13 (ENSSGRG00000034139) #21	mapk10 (ENSSGRG00000035788) #22	ARHGAP24 (ENSSGRG00000035925) #23	esm1 (ENSSGRG00000035932)
Zebrafish	MODERN SPECIES	13	F2R (ENSDARG00000086236)	F2R (ENSDARG00000090041)	F2R (ENSDARG00000087469)	F2R (ENSDARG00000059507)	OLFML2A (ENSDARG00000113533)	nr6a1b (ENSDARG00000014480)	nr5a1b (ENSDARG00000023362)	psmb7 (ENSDARG00000037962)	NEK6 (ENSDARG00000037963)	lhx2a (ENSDARG00000037964)	DENND1A (ENSDARG00000014592)	crb2a (ENSDARG00000060106)	ENSDARG00000055550	sdad1 (ENSDARG00000105117)	ptpn13 (ENSDARG00000103699) #21	mapk10 (ENSDARG00000102730) #22	ARHGAP24 (ENSDARG00000100973) #23	esm1 (ENSDARG00000104370)	ENSDARG00000098906	ENSDARG00000115806	HCN1 (ENSDARG00000104480)	ccbe1 (ENSDARG00000086158)	lman1 (ENSDARG00000069980)	cplx4a (ENSDARG00000059978)	rx3 (ENSDARG00000052893)	grp (ENSDARG00000043074)	ZNF532 (ENSDARG00000052894)	ENSDARG00000075191	ENSDARG00000079637	ENSDARG00000094879	NEDD4L (ENSDARG00000060006)
Characiphysae	ANCESTRAL SPECIES	79	ENSGT00950000183103.d.a.b	ENSGT00390000016258	ENSGT00390000014467	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00940000182167	ENSGT00390000010355	ENSGT00940000155133.b.w #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437.f	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Channel catfish	MODERN SPECIES	9	fech (ENSIPUG00000015077)	brix1 (ENSIPUG00000015099)	nup54 (ENSIPUG00000015139)	PPEF2 (ENSIPUG00000015185)	ENSIPUG00000015244	ENSIPUG00000015250	ENSIPUG00000015259	ENSIPUG00000015277	ENSIPUG00000015303	KLHL8 (ENSIPUG00000015328)	SLC10A6 (ENSIPUG00000015412)	sdad1 (ENSIPUG00000015428)	ENSIPUG00000015567	ptpn13 (ENSIPUG00000015592) #21	ENSIPUG00000015767	mapk10 (ENSIPUG00000015786) #22	Arhgap24 (ENSIPUG00000015997) #23	esm1 (ENSIPUG00000016080)	ENSIPUG00000016089	ENSIPUG00000016094	ENSIPUG00000016108	ENSIPUG00000016121	ENSIPUG00000016143	prlr (ENSIPUG00000016149)	agxt2 (ENSIPUG00000016201)	ENSIPUG00000016344	znf532 (ENSIPUG00000016408)	ENSIPUG00000016464	rx3 (ENSIPUG00000016474)	CPLX4 (ENSIPUG00000016489)	lman1 (ENSIPUG00000016515)
Characiphysae_b	ANCESTRAL SPECIES	86	ENSGT00390000016258	ENSGT00390000014467	ENSGT00390000013620	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01050000244842.b	ENSGT01100000263568.b.b	ENSGT00940000180865	ENSGT00940000157583	ENSGT00950000182808.a.a.a.a.b	ENSGT00980000198774	ENSGT00940000182167	ENSGT00390000010355	ENSGT00940000155133.b.w #21	ENSGT00940000153692.A #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813	ENSGT00940000175984	ENSGT00940000179017	ENSGT00940000158207	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00950000182938.b.b.b.b.b.b.i.b.b	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437.f	ENSGT00530000063340	ENSGT00940000160524	ENSGT00940000156873
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	490	st8sia3 (ENSEEEG00000016250)	ONECUT2 (ENSEEEG00000016251)	fech (ENSEEEG00000016253)	bxdc2 (ENSEEEG00000016262)	NUP54 (ENSEEEG00000016279)	PPEF2 (ENSEEEG00000016377)	ENSEEEG00000016379	ENSEEEG00000016382	ENSEEEG00000016391	ENSEEEG00000016394	klhl8 (ENSEEEG00000016398)	ENSEEEG00000016400	sdad1 (ENSEEEG00000016408)	ENSEEEG00000016468	ptpn13 (ENSEEEG00000016469) #21	ENSEEEG00000016475 #22
Electric eel	MODERN SPECIES	492																mapk10 (ENSEEEG00000016536) #22	ARHGAP24 (ENSEEEG00000016533) #23	esm1 (ENSEEEG00000016532)	ENSEEEG00000016531	ENSEEEG00000016526	ENSEEEG00000016516	ENSEEEG00000016515
Characoidei	ANCESTRAL SPECIES	513																ENSGT00940000153692.A #22	ENSGT00950000183015.D #23
Red-bellied piranha	MODERN SPECIES	1746																mapk10 (ENSPNAG00000020204) #22
Mexicana tetra	MODERN SPECIES	954															ENSAMXG00000029869	mapk10 (ENSAMXG00000030412) #22	ARHGAP24 (ENSAMXG00000011516) #23
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000153692.A.i #22
Asian bonytongue	MODERN SPECIES	8	poli (ENSSFOG00015000697)	dcc (ENSSFOG00015000706)	june (ENSSFOG00015032765)	NARS1 (ENSSFOG00015001094)	st8sia3 (ENSSFOG00015032419)	CCNG2 (ENSSFOG00015001163)	ENSSFOG00015031050	ENSSFOG00015024491	ENSSFOG00015026851	scarb2a (ENSSFOG00015001222)	PPEF2 (ENSSFOG00015001251)	NAAA (ENSSFOG00015001444)	ENSSFOG00015026163	ENSSFOG00015026913	ENSSFOG00015001522	ENSSFOG00015001533 #22	hint2 (ENSSFOG00015001540)	mrps30 (ENSSFOG00015024954)	ENSSFOG00015024521	EMB (ENSSFOG00015001833)	cplx4a (ENSSFOG00015001837)	ENSSFOG00015001860	tmem230b (ENSSFOG00015002001)	adra1aa (ENSSFOG00015002035)	DPYSL2 (ENSSFOG00015002065)	bnip3la (ENSSFOG00015002111)	ENSSFOG00015030619	LRRTM4 (ENSSFOG00015002241)	LRRTM4 (ENSSFOG00015002259)	vsig8b (ENSSFOG00015002310)	ENSSFOG00015026363
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	80	ENSGT00940000175255	ENSGT00940000153372.A.e.a.a	ENSGT01030000235124	ENSGT00940000153372.A.e.a.b.b	ENSGT00390000013620	ENSGT00940000165029	ENSGT00940000157870.a.a	ENSGT00400000024763	ENSGT00950000182974.a.b	ENSGT01100000263568.b.b	ENSGT01050000244842.b	ENSGT00940000177679	ENSGT00940000157583	ENSGT00390000010355	ENSGT00940000155133.b #21	ENSGT00940000153692.A.j.a #22	ENSGT00950000183015.D #23	ENSGT00390000018810	ENSGT00940000166813.c	ENSGT00940000158207.y	ENSGT00390000014907.B	ENSGT00940000159146	ENSGT00940000166467	ENSGT00940000174898	ENSGT00940000154437	ENSGT00530000063340	ENSGT00940000160524.d	ENSGT00940000156873	ENSGT00940000154851.B.b	ENSGT00940000156125	ENSGT00510000047097
Asian bonytongue	MODERN SPECIES	21	SCARB2 (ENSSFOG00015021550)	ENSSFOG00015032900	ENSSFOG00015031653	NUP54 (ENSSFOG00015021598)	PPEF2 (ENSSFOG00015021658)	ENSSFOG00015021728	AFF1 (ENSSFOG00015021743)	ENSSFOG00015021772	ENSSFOG00015021836	ENSSFOG00015021789	ENSSFOG00015024640	klhl8 (ENSSFOG00015021915)	ENSSFOG00015021943	sdad1 (ENSSFOG00015021925)	ptpn13 (ENSSFOG00015021966) #21	mapk10 (ENSSFOG00015022045) #22	ARHGAP24 (ENSSFOG00015022084) #23	esm1 (ENSSFOG00015029052)	ENSSFOG00015028941	HCN1 (ENSSFOG00015022126)	ccbe1 (ENSSFOG00015022132)	lman1 (ENSSFOG00015022141)	rx3 (ENSSFOG00015022166)	ENSSFOG00015022171	ZNF532 (ENSSFOG00015022177)	ENSSFOG00015022206	ENSSFOG00015032706	NEDD4L (ENSSFOG00015022266)	prlra (ENSSFOG00015022377)	agxt2 (ENSSFOG00015022392)	dnajc21 (ENSSFOG00015022418)
P. kingsleyae	MODERN SPECIES	241	SHROOM3 (ENSPKIG00000008146)	ENSPKIG00000008064	ENSPKIG00000008049	SCARB2 (ENSPKIG00000008021)	ENSPKIG00000008008	ENSPKIG00000007973	nup54 (ENSPKIG00000007952)	PPEF2 (ENSPKIG00000007922)	ENSPKIG00000007885	ENSPKIG00000007777	ENSPKIG00000007729	ENSPKIG00000007717	klhl8 (ENSPKIG00000007668)	sdad1 (ENSPKIG00000007518)	ptpn13 (ENSPKIG00000007155) #21	mapk10 (ENSPKIG00000006972) #22	ARHGAP24 (ENSPKIG00000006887) #23	esm1 (ENSPKIG00000006852)	ENSPKIG00000006832	ENSPKIG00000006808	ENSPKIG00000006793	ENSPKIG00000006767	ENSPKIG00000006750	HCN1 (ENSPKIG00000006735)	lman1 (ENSPKIG00000006686)	rx3 (ENSPKIG00000006655)	ENSPKIG00000006645	ZNF532 (ENSPKIG00000006603)	ENSPKIG00000006526	NEDD4L (ENSPKIG00000006137)	prlra (ENSPKIG00000005991)
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00940000153692.A.j.b #22
P. kingsleyae	MODERN SPECIES	70	ONECUT2 (ENSPKIG00000024479)	st8sia3 (ENSPKIG00000024471)	CCNG2 (ENSPKIG00000024457)	ENSPKIG00000024385	ENSPKIG00000024449	ENSPKIG00000024351	ENSPKIG00000024342	scarb2a (ENSPKIG00000024324)	NAAA (ENSPKIG00000024306)	ENSPKIG00000024282	PPEF2 (ENSPKIG00000024236)	ENSPKIG00000024213	NAAA (ENSPKIG00000024203)	ENSPKIG00000024190	ENSPKIG00000024181	mapk10 (ENSPKIG00000024133) #22	ENSPKIG00000024090	hint2 (ENSPKIG00000024049)	mrps30 (ENSPKIG00000024011)	ENSPKIG00000024003	emb (ENSPKIG00000023980)	cplx4a (ENSPKIG00000023970)	ENSPKIG00000023948	tmem230b (ENSPKIG00000023927)	adra1aa (ENSPKIG00000023915)	DPYSL2 (ENSPKIG00000023890)	bnip3la (ENSPKIG00000023867)	ppp2r2ab (ENSPKIG00000023844)	LRRTM4 (ENSPKIG00000023825)
Elephant shark	MODERN SPECIES	1535				SCARB2 (ENSCMIG00000006348)	ENSCMIG00000006353	NUP54 (ENSCMIG00000006364)	PPEF2 (ENSCMIG00000006373)	NAAA (ENSCMIG00000006383)	sdad1 (ENSCMIG00000006463)	ENSCMIG00000006680	klhl8 (ENSCMIG00000006700)	AFF1 (ENSCMIG00000006724)	ENSCMIG00000006731	tmem144a (ENSCMIG00000006735)	PTPN13 (ENSCMIG00000006761) #21	mapk10 (ENSCMIG00000006833) #22	ARHGAP24 (ENSCMIG00000006879) #23	WDFY3 (ENSCMIG00000006939) #24	CDS1 (ENSCMIG00000007022) #26	tmem175 (ENSCMIG00000007174)	rasgef1ba (ENSCMIG00000007211)	prkg2 (ENSCMIG00000007237)	bmp3 (ENSCMIG00000007269)	cfap299 (ENSCMIG00000007273)	ENSCMIG00000007277	fgf5 (ENSCMIG00000007279)	prdm8b (ENSCMIG00000007284)	ENSCMIG00000007289	ENSCMIG00000007296	paqr3b (ENSCMIG00000007299)	bmp2k (ENSCMIG00000007305)
Cyclostomata	ANCESTRAL SPECIES	355															ENSGT00940000155133 #21	ENSGT00940000153692.A #22
Lamprey	MODERN SPECIES	933																mapk10 (ENSPMAG00000000656) #22	ENSPMAG00000000652 ##23
Hagfish	MODERN SPECIES	1286									ENSEBUG00000010843	ENSEBUG00000005879	gfpt1 (ENSEBUG00000011807)	ENSEBUG00000002276	ENSEBUG00000008769	ENSEBUG00000008232	ENSEBUG00000006931 #21	mapk10 (ENSEBUG00000007037) #22