Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000163742 #10	ENSGT00940000159751 #11	ENSGT00940000162506 #12	ENSGT00940000165137 #13	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00690000103941 #19	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00940000160667	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
Perciformes	ANCESTRAL SPECIES	10	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000163742 #10	ENSGT00940000159751 #11	ENSGT00940000162506 #12	ENSGT00940000165137 #13	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00690000103941 #19	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00970000198420 #25	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00990000203749	ENSGT00940000162428.g.a	ENSGT01030000234627.a.a.c	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000159751 #11	ENSGT00940000162506 #12	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00970000198420 #25	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
Pike perch	MODERN SPECIES	133	caspa (ENSSLUG00000008712)	STX1A (ENSSLUG00000008723)	bud23 (ENSSLUG00000008853) #7	dnajc30b (ENSSLUG00000008934) #8	SH2B2 (ENSSLUG00000008943) #9	CUX1 (ENSSLUG00000008986) #11	FUT4 (ENSSLUG00000009473) #12	ENSSLUG00000009476	srprb (ENSSLUG00000009483) #14	WDR53 (ENSSLUG00000009490) #15	neu4 (ENSSLUG00000009497) #16	gfm1 (ENSSLUG00000009543) #18	lxn (ENSSLUG00000010832) #17	itpkcb (ENSSLUG00000010835) #20	zgc:153119 (ENSSLUG00000010839) #21	snrpa (ENSSLUG00000010843) #22	clasrp (ENSSLUG00000010852) #24	ENSSLUG00000010871 #26	fosb (ENSSLUG00000010881) #27	si:ch211-160d20.3 (ENSSLUG00000010883) #28	ttc9b (ENSSLUG00000010887) #29	MAP3K10 (ENSSLUG00000010889) #30	SIPA1L3 (ENSSLUG00000010903) #31	rrm1 (ENSSLUG00000010952) #32	qpctla (ENSSLUG00000010967) #33	six9 (ENSSLUG00000010982) #34	six5 (ENSSLUG00000010996) #35	tbcb (ENSSLUG00000011003) #36	clptm1 (ENSSLUG00000011013) #37	RELB (ENSSLUG00000011027)	mrpl28 (ENSSLUG00000011031)
Channel bull blenny	MODERN SPECIES	4	caspa (ENSCGOG00000011627)	STX1A (ENSCGOG00000011471)	bud23 (ENSCGOG00000011438) #7	DNAJC30 (ENSCGOG00000011433) #8	SH2B2 (ENSCGOG00000011426) #9	CUX1 (ENSCGOG00000010330) #11	FUT4 (ENSCGOG00000010288) #12	COL26A1 (ENSCGOG00000010283)	srprb (ENSCGOG00000010258) #14	WDR53 (ENSCGOG00000010253) #15	neu4 (ENSCGOG00000010251) #16	lxn (ENSCGOG00000010250) #17	gfm1 (ENSCGOG00000009848) #18	itpkcb (ENSCGOG00000009819) #20	zgc:153119 (ENSCGOG00000009814) #21	snrpa (ENSCGOG00000009785) #22	ENSCGOG00000009782 #23	clasrp (ENSCGOG00000009636) #24	ENSCGOG00000009633 #25	ENSCGOG00000009605 #26	fosb (ENSCGOG00000009598) #27	si:ch211-160d20.3 (ENSCGOG00000009586) #28	ttc9b (ENSCGOG00000009584) #29	MAP3K10 (ENSCGOG00000009579) #30	SIPA1L3 (ENSCGOG00000009564) #31	rrm1 (ENSCGOG00000009549) #32	qpctla (ENSCGOG00000009543) #33	six9 (ENSCGOG00000009534) #34	six5 (ENSCGOG00000009530) #35	tbcb (ENSCGOG00000009526) #36	clptm1 (ENSCGOG00000009254) #37
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000163742 #10	ENSGT00940000159751 #11	ENSGT00940000162506 #12	ENSGT00940000165137 #13	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00690000103941 #19	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00970000198420 #25	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
Lumpfish	MODERN SPECIES	4	caspa (ENSCLMG00005016240)	STX1A (ENSCLMG00005016238)	bud23 (ENSCLMG00005016236) #7	dnajc30b (ENSCLMG00005016233) #8	SH2B2 (ENSCLMG00005016230) #9	cux1b (ENSCLMG00005016222) #10	FUT4 (ENSCLMG00005016214) #12	ENSCLMG00005016211 #13	WDR53 (ENSCLMG00005016209) #15	srprb (ENSCLMG00005016208) #14	neu4 (ENSCLMG00005016205) #16	lxn (ENSCLMG00005016203) #17	gfm1 (ENSCLMG00005016027) #18	itpkcb (ENSCLMG00005016026) #20	zgc:153119 (ENSCLMG00005016025) #21	snrpa (ENSCLMG00005016024) #22	ENSCLMG00005016023 #23	ENSCLMG00005016022	clasrp (ENSCLMG00005016015) #24	ENSCLMG00005016012 #25	ENSCLMG00005016007 #26	fosb (ENSCLMG00005016005) #27	si:ch211-160d20.3 (ENSCLMG00005016003) #28	ttc9b (ENSCLMG00005016001) #29	MAP3K10 (ENSCLMG00005015779) #30	ENSCLMG00005015757 #31	ENSCLMG00005015756 #31	RRM1 (ENSCLMG00005015755) #32	qpctla (ENSCLMG00005015754) #33	six9 (ENSCLMG00005015753) #34	six5 (ENSCLMG00005015752) #35
Stickleback	MODERN SPECIES		caspa (ENSGACG00000009989)	STX1A (ENSGACG00000009957)	bud23 (ENSGACG00000009951) #7	dnajc30b (ENSGACG00000009948) #8	SH2B2 (ENSGACG00000009944) #9	cux1b (ENSGACG00000009936) #10	CUX1 (ENSGACG00000009915) #11	FUT4 (ENSGACG00000009912) #12	srprb (ENSGACG00000009891) #14	WDR53 (ENSGACG00000009884) #15	neu4 (ENSGACG00000009879) #16	gfm1 (ENSGACG00000009864) #18	ENSGACG00000009863 #19	itpkcb (ENSGACG00000009859) #20	zgc:153119 (ENSGACG00000009856) #21	snrpa (ENSGACG00000009838) #22	ENSGACG00000009835 #23	ENSGACG00000009834 #23	clasrp (ENSGACG00000009826) #24	ENSGACG00000009801 #26	fosb (ENSGACG00000009792) #27	si:ch211-160d20.3 (ENSGACG00000009786) #28	ttc9b (ENSGACG00000009784) #29	MAP3K10 (ENSGACG00000009773) #30	SIPA1L3 (ENSGACG00000009761) #31	rrm1 (ENSGACG00000009741) #32	qpctla (ENSGACG00000009732) #33	six9 (ENSGACG00000009726) #34	six5 (ENSGACG00000009721) #35	tbcb (ENSGACG00000009693) #36	clptm1 (ENSGACG00000009668) #37
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT01030000234627.a.a.c	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000163742 #10	ENSGT00940000159751 #11	ENSGT00940000161811.d	ENSGT00940000162506 #12	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00940000160667	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT01030000234627.a.a.c	ENSGT00390000014737 #7	ENSGT00510000048685.g.a #8	ENSGT00950000183191.a.b #9	ENSGT00940000159751 #11	ENSGT00940000161811.d	ENSGT00940000163742 #10	ENSGT00940000162506 #12	ENSGT00940000166703 #14	ENSGT00390000011073 #15	ENSGT00950000182944.B.a #16	ENSGT00530000063813.b #17	ENSGT00550000074911 #18	ENSGT00940000160033.c #20	ENSGT00390000012368 #21	ENSGT00390000007046.b.a.b #22	ENSGT00940000166445 #23	ENSGT00940000153892.A #24	ENSGT00940000160667	ENSGT00940000166395 #26	ENSGT00940000160358 #27	ENSGT00390000005773 #28	ENSGT00940000161494 #29	ENSGT00940000160518 #30	ENSGT00940000159183 #31	ENSGT00910000144246.b.c.a #32	ENSGT00390000003107.b.j #33	ENSGT00940000158292.b #34	ENSGT00940000166238.a #35	ENSGT00940000156119 #36	ENSGT00530000063461.B #37
European seabass	MODERN SPECIES	3	ENSDLAG00005003007	ENSDLAG00005026840	bud23 (ENSDLAG00005002705) #7	ENSDLAG00005026973 #8	ENSDLAG00005002615 #9	ENSDLAG00005029077 #11	cux1b (ENSDLAG00005001943) #10	ENSDLAG00005033884 #12	ENSDLAG00005030178	ENSDLAG00005001911 #15	neu4 (ENSDLAG00005033317) #16	ENSDLAG00005001856 #17	ENSDLAG00005001159 #18	itpkcb (ENSDLAG00005001116) #20	ENSDLAG00005035057 #21	snrpa (ENSDLAG00005001109) #22	clasrp (ENSDLAG00005000998) #24	znf296 (ENSDLAG00005000969)	ENSDLAG00005000961 #26	fosb (ENSDLAG00005000957) #27	si:ch211-160d20.3 (ENSDLAG00005000954) #28	ttc9b (ENSDLAG00005034348) #29	ENSDLAG00005000951 #30	ENSDLAG00005000900 #31	ENSDLAG00005000877 #32	six9 (ENSDLAG00005000868) #34	ENSDLAG00005030159 #35	ENSDLAG00005029683 #33	clptm1 (ENSDLAG00005000842) #37	ENSDLAG00005000830	mrpl28 (ENSDLAG00005000825)
Large yellow croaker	MODERN SPECIES	479	STX1A (ENSLCRG00005004159)	bud23 (ENSLCRG00005004158) #7	dnajc30b (ENSLCRG00005004157) #8	SH2B2 (ENSLCRG00005004156) #9	cfap45 (ENSLCRG00005004154)	CUX1 (ENSLCRG00005004078) #11	myl10 (ENSLCRG00005004070)	COL26A1 (ENSLCRG00005004064)	srprb (ENSLCRG00005004057) #14	WDR53 (ENSLCRG00005004056) #15	neu4 (ENSLCRG00005004054) #16	lxn (ENSLCRG00005004053) #17	gfm1 (ENSLCRG00005003672) #18	itpkcb (ENSLCRG00005003665) #20	zgc:153119 (ENSLCRG00005003664) #21	snrpa (ENSLCRG00005003660) #22	ENSLCRG00005003659 #23	clasrp (ENSLCRG00005003647) #24	znf296 (ENSLCRG00005003645)	ENSLCRG00005003641 #26	fosb (ENSLCRG00005003639) #27	si:ch211-160d20.3 (ENSLCRG00005003638) #28	ttc9b (ENSLCRG00005003637) #29	MAP3K10 (ENSLCRG00005003626) #30	SIPA1L3 (ENSLCRG00005003625) #31	rrm1 (ENSLCRG00005003624) #32	qpctla (ENSLCRG00005003621) #33	six9 (ENSLCRG00005003617) #34	six5 (ENSLCRG00005003615) #35	tbcb (ENSLCRG00005003612) #36	clptm1 (ENSLCRG00005002992) #37
Gilthead seabream	MODERN SPECIES	11	STX1A (ENSSAUG00010008506)	bud23 (ENSSAUG00010008932) #7	dnajc30b (ENSSAUG00010008985) #8	SH2B2 (ENSSAUG00010008989) #9	cux1b (ENSSAUG00010009009) #10	ENSSAUG00010011166 #11	FUT4 (ENSSAUG00010011167) #12	ENSSAUG00010011168	srprb (ENSSAUG00010011170) #14	WDR53 (ENSSAUG00010011173) #15	neu4 (ENSSAUG00010011177) #16	gfm1 (ENSSAUG00010011206) #18	ENSSAUG00010013319	itpkcb (ENSSAUG00010013321) #20	zgc:153119 (ENSSAUG00010013323) #21	snrpa (ENSSAUG00010013326) #22	ENSSAUG00010013328 #23	clasrp (ENSSAUG00010013334) #24	znf296 (ENSSAUG00010013335)	ENSSAUG00010013339 #26	fosb (ENSSAUG00010013351) #27	si:ch211-160d20.3 (ENSSAUG00010013355) #28	ttc9b (ENSSAUG00010013357) #29	MAP3K10 (ENSSAUG00010013359) #30	SIPA1L3 (ENSSAUG00010013365) #31	rrm1 (ENSSAUG00010013384) #32	qpctla (ENSSAUG00010013389) #33	six9 (ENSSAUG00010013391) #34	six5 (ENSSAUG00010013392) #35	tbcb (ENSSAUG00010013393) #36	clptm1 (ENSSAUG00010013398) #37