Vertebrata DUPLICATION Vertebrata ANCESTRAL SPECIES 986 ENSGT00390000008812.b #22 ENSGT00940000168666 Gnathostomata DUPLICATION Gnathostomata ANCESTRAL SPECIES 168 ENSGT01100000263473.a.b ENSGT00950000182984.b.a.a ENSGT00940000156059 ENSGT01090000259987.b.b.a.a ENSGT00390000010523.c.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000163949 ENSGT00940000156292 Euteleostomi ANCESTRAL SPECIES 212 ENSGT01100000263473.a.b ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a ENSGT00940000165895 ENSGT00940000156059 ENSGT01090000259987.b.b.a.a.b ENSGT01090000259987.b.b.a.a.a.a ENSGT00390000010523.c.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 Sarcopterygii ANCESTRAL SPECIES 270 ENSGT00530000063836.b ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a ENSGT00940000165895 ENSGT00940000156059 ENSGT01090000259987.b.b.a.a.b ENSGT00390000010523.c.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 Tetrapoda ANCESTRAL SPECIES 46 ENSGT00940000156447.b ENSGT00530000063836.b ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a ENSGT00940000165895 ENSGT00940000156059 ENSGT01090000259987.b.b.a.a.b ENSGT00390000010523.c.a ENSGT00940000164674 ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000163949 ENSGT00940000156292 ENSGT00390000002808 ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 ENSGT00940000161778 Amniota ANCESTRAL SPECIES 14 ENSGT00940000156193 ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00390000013973.B ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a Mammalia ANCESTRAL SPECIES 12 ENSGT00940000156193 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 Theria ANCESTRAL SPECIES 25 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 Eutheria ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Boreoeutheria ANCESTRAL SPECIES 4 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 Euarchontoglires ANCESTRAL SPECIES 4 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 Primates ANCESTRAL SPECIES 3 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Strepsirrhini ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Lemuriformes ANCESTRAL SPECIES 2 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Mouse lemur MODERN SPECIES 7 RAB11FIP4 (ENSMICG00000002885) #7 COPRS (ENSMICG00000029453) #8 UTP6 (ENSMICG00000002632) #9 SUZ12 (ENSMICG00000002637) #10 CRLF3 (ENSMICG00000033044) #11 ATAD5 (ENSMICG00000003613) #12 TEFM (ENSMICG00000009936) #13 ADAP2 (ENSMICG00000003621) #14 RNF135 (ENSMICG00000005151) #15 RHOT1 (ENSMICG00000007771) #16 RHBDL3 (ENSMICG00000007783) #17 C17orf75 (ENSMICG00000007788) #18 ZNF207 (ENSMICG00000002395) #19 ENSMICG00000026860 #20 PSMD11 (ENSMICG00000011849) #21 CDK5R1 (ENSMICG00000042797) #22 MYO1D (ENSMICG00000011863) #23 TMEM98 (ENSMICG00000011888) #24 SPACA3 (ENSMICG00000043535) #25 ASIC2 (ENSMICG00000035781) #26 CCL2 (ENSMICG00000034682) #27 CCL8 (ENSMICG00000037888) #28 CCL13 (ENSMICG00000036035) #29 CCL1 (ENSMICG00000042374) #30 TMEM132E (ENSMICG00000003085) #31 CCT6B (ENSMICG00000035976) #32 LIG3 (ENSMICG00000006814) #33 RFFL (ENSMICG00000006829) #34 RAD51D (ENSMICG00000043657) #35 FNDC8 (ENSMICG00000044023) #36 NLE1 (ENSMICG00000001256) #37 Lemuriformes_a ANCESTRAL SPECIES ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Greater bamboo lemur MODERN SPECIES 167 ENSPSMG00000015918 COPRS (ENSPSMG00000015946) #8 UTP6 (ENSPSMG00000016038) #9 SUZ12 (ENSPSMG00000016122) #10 CRLF3 (ENSPSMG00000016147) #11 ATAD5 (ENSPSMG00000016178) #12 TEFM (ENSPSMG00000016197) #13 ADAP2 (ENSPSMG00000016226) #14 RNF135 (ENSPSMG00000016233) #15 RHOT1 (ENSPSMG00000016604) #16 RHBDL3 (ENSPSMG00000016749) #17 ENSPSMG00000016756 C17orf75 (ENSPSMG00000016774) #18 ZNF207 (ENSPSMG00000016931) #19 PSMD11 (ENSPSMG00000016979) #21 CDK5R1 (ENSPSMG00000016985) #22 MYO1D (ENSPSMG00000017027) #23 TMEM98 (ENSPSMG00000017093) #24 SPACA3 (ENSPSMG00000017102) #25 ASIC2 (ENSPSMG00000017117) #26 CCL2 (ENSPSMG00000017119) #27 ENSPSMG00000017122 ##30 CCL11 (ENSPSMG00000017132) ##30 CCL8 (ENSPSMG00000017139) #28 CCL13 (ENSPSMG00000017153) #29 TMEM132E (ENSPSMG00000017176) #31 ENSPSMG00000017180 CCT6B (ENSPSMG00000017271) #32 ZNF830 (ENSPSMG00000017386) LIG3 (ENSPSMG00000017498) #33 RFFL (ENSPSMG00000017643) #34 Coquerels sifaka MODERN SPECIES 400 RAB11FIP4 (ENSPCOG00000027596) #7 ENSPCOG00000017944 COPRS (ENSPCOG00000016471) #8 UTP6 (ENSPCOG00000010224) #9 SUZ12 (ENSPCOG00000014564) #10 CRLF3 (ENSPCOG00000015459) #11 ATAD5 (ENSPCOG00000017323) #12 TEFM (ENSPCOG00000022322) #13 ADAP2 (ENSPCOG00000020468) #14 RNF135 (ENSPCOG00000022621) #15 ENSPCOG00000014537 #16 RHBDL3 (ENSPCOG00000027181) #17 C17orf75 (ENSPCOG00000028496) #18 ZNF207 (ENSPCOG00000020744) #19 PSMD11 (ENSPCOG00000020989) #21 CDK5R1 (ENSPCOG00000002073) #22 MYO1D (ENSPCOG00000015762) #23 TMEM98 (ENSPCOG00000020899) #24 SPACA3 (ENSPCOG00000018597) #25 ASIC2 (ENSPCOG00000025881) #26 CCL2 (ENSPCOG00000015709) #27 ENSPCOG00000009890 CCL11 (ENSPCOG00000013678) ##30 CCL8 (ENSPCOG00000003413) #28 CCL13 (ENSPCOG00000020576) #29 CCL1 (ENSPCOG00000027470) #30 TMEM132E (ENSPCOG00000014193) #31 Bushbaby MODERN SPECIES 227 ENSOGAG00000032163 RAB11FIP4 (ENSOGAG00000016294) #7 COPRS (ENSOGAG00000004510) #8 UTP6 (ENSOGAG00000004511) #9 SUZ12 (ENSOGAG00000016923) #10 CRLF3 (ENSOGAG00000001185) #11 ATAD5 (ENSOGAG00000001186) #12 TEFM (ENSOGAG00000001190) #13 ADAP2 (ENSOGAG00000001192) #14 RNF135 (ENSOGAG00000001193) #15 RHOT1 (ENSOGAG00000001194) #16 RHBDL3 (ENSOGAG00000001197) #17 C17orf75 (ENSOGAG00000001198) #18 ENSOGAG00000001200 #19 PSMD11 (ENSOGAG00000015456) #21 CDK5R1 (ENSOGAG00000034547) #22 MYO1D (ENSOGAG00000015457) #23 TMEM98 (ENSOGAG00000015459) #24 SPACA3 (ENSOGAG00000025382) #25 ASIC2 (ENSOGAG00000015461) #26 CCL7 (ENSOGAG00000003894) ##30 CCL11 (ENSOGAG00000003893) ##30 ENSOGAG00000028610 ##30 CCL13 (ENSOGAG00000003892) #29 ENSOGAG00000003889 #30 TMEM132E (ENSOGAG00000008267) #31 CCT6B (ENSOGAG00000009862) #32 ZNF830 (ENSOGAG00000009870) LIG3 (ENSOGAG00000009871) #33 RFFL (ENSOGAG00000024777) #34 RAD51D (ENSOGAG00000009880) #35 Haplorrhini ANCESTRAL SPECIES 6 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Tarsier MODERN SPECIES 2201 ZNF207 (ENSTSYG00000003620) #19 PSMD11 (ENSTSYG00000012073) #21 CDK5R1 (ENSTSYG00000011930) #22 MYO1D (ENSTSYG00000011934) #23 Simiiformes ANCESTRAL SPECIES 7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Platyrrhini ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.i #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Cebidae ANCESTRAL SPECIES 10 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.b.a #9 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.i #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Marmoset MODERN SPECIES 17 ENSCJAG00000014106 COPRS (ENSCJAG00000014110) #8 UTP6 (ENSCJAG00000014115) #9 SUZ12 (ENSCJAG00000014133) #10 ENSCJAG00000085031 CRLF3 (ENSCJAG00000039568) #11 ENSCJAG00000078212 ATAD5 (ENSCJAG00000014179) #12 TEFM (ENSCJAG00000014201) #13 RNF135 (ENSCJAG00000014210) #15 RHOT1 (ENSCJAG00000014248) #16 RHBDL3 (ENSCJAG00000014342) #17 C17orf75 (ENSCJAG00000014362) #18 ZNF207 (ENSCJAG00000014376) #19 PSMD11 (ENSCJAG00000014450) #21 CDK5R1 (ENSCJAG00000047608) #22 MYO1D (ENSCJAG00000014516) #23 TMEM98 (ENSCJAG00000014550) #24 SPACA3 (ENSCJAG00000014561) #25 ENSCJAG00000051816 #26 ASIC2 (ENSCJAG00000014568) #26 CCL7 (ENSCJAG00000062725) ##30 CCL2 (ENSCJAG00000057655) #27 CCL8 (ENSCJAG00000038352) #28 CCL13 (ENSCJAG00000042890) #29 ENSCJAG00000076401 TMEM132E (ENSCJAG00000014632) #31 CCT6B (ENSCJAG00000014646) #32 ZNF830 (ENSCJAG00000058086) LIG3 (ENSCJAG00000014668) #33 RFFL (ENSCJAG00000014721) #34 Cebidae_a ANCESTRAL SPECIES 1 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.b.a #9 ENSGT00390000008040.t ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.i #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01060000248892 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Bolivian squirrel monkey MODERN SPECIES 95 TEFM (ENSSBOG00000019565) #13 ADAP2 (ENSSBOG00000030389) #14 RNF135 (ENSSBOG00000030138) #15 RHOT1 (ENSSBOG00000031085) #16 RHBDL3 (ENSSBOG00000028127) #17 C17orf75 (ENSSBOG00000023876) #18 ZNF207 (ENSSBOG00000026038) #19 ENSSBOG00000035683 PSMD11 (ENSSBOG00000027961) #21 ENSSBOG00000016899 CDK5R1 (ENSSBOG00000021952) #22 MYO1D (ENSSBOG00000005563) #23 TMEM98 (ENSSBOG00000029612) #24 SPACA3 (ENSSBOG00000031184) #25 ASIC2 (ENSSBOG00000032279) #26 CCL2 (ENSSBOG00000035114) #27 CCL7 (ENSSBOG00000033930) ##30 CCL11 (ENSSBOG00000028311) ##30 CCL8 (ENSSBOG00000018317) #28 ENSSBOG00000032338 CCL1 (ENSSBOG00000014955) #30 TMEM132E (ENSSBOG00000029140) #31 CCT6B (ENSSBOG00000025684) #32 LIG3 (ENSSBOG00000030290) #33 RFFL (ENSSBOG00000028909) #34 RAD51D (ENSSBOG00000033587) #35 Capuchin MODERN SPECIES 140 RAB11FIP4 (ENSCCAG00000027489) #7 COPRS (ENSCCAG00000010505) #8 ENSCCAG00000033318 #9 ENSCCAG00000032928 SUZ12 (ENSCCAG00000037725) #10 CRLF3 (ENSCCAG00000020821) #11 ATAD5 (ENSCCAG00000023275) #12 TEFM (ENSCCAG00000031597) #13 ADAP2 (ENSCCAG00000019010) #14 RNF135 (ENSCCAG00000034866) #15 RHOT1 (ENSCCAG00000024157) #16 RHBDL3 (ENSCCAG00000028200) #17 C17orf75 (ENSCCAG00000031556) #18 ZNF207 (ENSCCAG00000030971) #19 ENSCCAG00000030507 #21 CDK5R1 (ENSCCAG00000001118) #22 MYO1D (ENSCCAG00000035418) #23 TMEM98 (ENSCCAG00000025493) #24 SPACA3 (ENSCCAG00000036668) #25 ASIC2 (ENSCCAG00000037205) #26 Mas night monkey MODERN SPECIES 416 UTP6 (ENSANAG00000034603) #9 ENSANAG00000019084 ENSANAG00000035949 SUZ12 (ENSANAG00000025936) #10 CRLF3 (ENSANAG00000026772) #11 ATAD5 (ENSANAG00000038293) #12 ENSANAG00000030251 TEFM (ENSANAG00000037987) #13 ADAP2 (ENSANAG00000020704) #14 RNF135 (ENSANAG00000020022) #15 ENSANAG00000029584 #16 RHBDL3 (ENSANAG00000027744) #17 C17orf75 (ENSANAG00000032338) #18 ZNF207 (ENSANAG00000033773) #19 PSMD11 (ENSANAG00000021703) #21 CDK5R1 (ENSANAG00000012728) #22 MYO1D (ENSANAG00000036261) #23 ENSANAG00000037868 TMEM98 (ENSANAG00000038126) #24 SPACA3 (ENSANAG00000035068) #25 ASIC2 (ENSANAG00000001281) #26 CCL2 (ENSANAG00000037893) #27 CCL7 (ENSANAG00000022972) ##30 CCL11 (ENSANAG00000025265) ##30 CCL8 (ENSANAG00000023316) #28 ENSANAG00000034079 CCL1 (ENSANAG00000023858) #30 TMEM132E (ENSANAG00000029169) #31 ENSANAG00000006396 ENSANAG00000034074 CCT6B (ENSANAG00000036626) #32 Catarrhini ANCESTRAL SPECIES 8 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Hominoidea ANCESTRAL SPECIES 27 ENSGT00440000033742.a.b #7 ENSGT00390000007384.c.a #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Hominidae ANCESTRAL SPECIES 20 ENSGT00440000033742.a.b #7 ENSGT00390000007384.d #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Homo/Pan/Gorilla group ANCESTRAL SPECIES 1 ENSGT00390000007384.d #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b.g.a #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00910000148183 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Gorilla MODERN SPECIES 18 EVI2A (ENSGGOG00000024807) NF1 (ENSGGOG00000006983) RAB11FIP4 (ENSGGOG00000001071) #7 COPRS (ENSGGOG00000007292) #8 UTP6 (ENSGGOG00000013569) #9 SUZ12 (ENSGGOG00000010352) #10 ENSGGOG00000026947 ENSGGOG00000043944 ENSGGOG00000037185 RHOT1 (ENSGGOG00000006643) #16 ENSGGOG00000037024 RHBDL3 (ENSGGOG00000010876) #17 C17orf75 (ENSGGOG00000002514) #18 ENSGGOG00000024003 #19 PSMD11 (ENSGGOG00000001054) #21 CDK5R1 (ENSGGOG00000040028) #22 MYO1D (ENSGGOG00000000276) #23 TMEM98 (ENSGGOG00000013333) #24 SPACA3 (ENSGGOG00000001125) #25 ENSGGOG00000040939 #26 ENSGGOG00000041068 ##26 CCL2 (ENSGGOG00000016211) #27 CCL7 (ENSGGOG00000004500) ##30 ENSGGOG00000044068 ##30 ENSGGOG00000044171 ##30 CCL8 (ENSGGOG00000004504) #28 CCL13 (ENSGGOG00000002887) #29 CCL1 (ENSGGOG00000028387) #30 TMEM132E (ENSGGOG00000015325) #31 CCT6B (ENSGGOG00000022453) #32 ZNF830 (ENSGGOG00000021990) Homo/Pan group ANCESTRAL SPECIES 2 ENSGT00390000007384.c.a #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b.g.a #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00910000148183 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Pan ANCESTRAL SPECIES 3 ENSGT00390000007384.d #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b.g.a #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00910000148183 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Chimpanzee MODERN SPECIES 8 COPRS (ENSPTRG00000008976) #8 UTP6 (ENSPTRG00000008977) #9 SUZ12 (ENSPTRG00000008980) #10 CRLF3 (ENSPTRG00000008963) #11 ATAD5 (ENSPTRG00000008964) #12 TEFM (ENSPTRG00000008965) #13 ADAP2 (ENSPTRG00000008966) #14 RNF135 (ENSPTRG00000008967) #15 ENSPTRG00000050077 RHOT1 (ENSPTRG00000008986) #16 ENSPTRG00000051245 RHBDL3 (ENSPTRG00000008987) #17 C17H17orf75 (ENSPTRG00000008988) #18 ZNF207 (ENSPTRG00000008989) #19 PSMD11 (ENSPTRG00000008990) #21 CDK5R1 (ENSPTRG00000030892) #22 MYO1D (ENSPTRG00000008991) #23 TMEM98 (ENSPTRG00000008993) #24 SPACA3 (ENSPTRG00000049269) #25 ASIC2 (ENSPTRG00000008996) #26 CCL2 (ENSPTRG00000008999) #27 CCL7 (ENSPTRG00000009000) ##30 CCL11 (ENSPTRG00000048230) ##30 CCL8 (ENSPTRG00000009002) #28 CCL13 (ENSPTRG00000043899) #29 CCL1 (ENSPTRG00000009004) #30 TMEM132E (ENSPTRG00000009005) #31 CCT6B (ENSPTRG00000023221) #32 ZNF830 (ENSPTRG00000009007) LIG3 (ENSPTRG00000009008) #33 RFFL (ENSPTRG00000051761) #34 Bonobo MODERN SPECIES 8 ENSPPAG00000039082 #8 UTP6 (ENSPPAG00000038089) #9 CRLF3 (ENSPPAG00000037920) #11 ATAD5 (ENSPPAG00000030438) #12 TEFM (ENSPPAG00000039403) #13 ADAP2 (ENSPPAG00000027684) #14 ENSPPAG00000031531 #15 ENSPPAG00000022296 ENSPPAG00000012149 RHOT1 (ENSPPAG00000027700) #16 ENSPPAG00000034448 RHBDL3 (ENSPPAG00000027407) #17 C17orf75 (ENSPPAG00000028763) #18 ENSPPAG00000032098 #19 PSMD11 (ENSPPAG00000044105) #21 CDK5R1 (ENSPPAG00000030747) #22 MYO1D (ENSPPAG00000036175) #23 TMEM98 (ENSPPAG00000037372) #24 SPACA3 (ENSPPAG00000039834) #25 ENSPPAG00000038474 ENSPPAG00000035274 #26 CCL2 (ENSPPAG00000033176) #27 CCL7 (ENSPPAG00000029310) ##30 CCL11 (ENSPPAG00000041920) ##30 CCL8 (ENSPPAG00000039853) #28 CCL13 (ENSPPAG00000041440) #29 CCL1 (ENSPPAG00000004362) #30 ENSPPAG00000041711 TMEM132E (ENSPPAG00000034783) #31 CCT6B (ENSPPAG00000037136) #32 ZNF830 (ENSPPAG00000016768) Human MODERN SPECIES 8 NF1 (ENSG00000196712) OMG (ENSG00000126861) EVI2B (ENSG00000185862) ENSG00000265118 EVI2A (ENSG00000126860) RAB11FIP4 (ENSG00000131242) #7 COPRS (ENSG00000172301) #8 UTP6 (ENSG00000108651) #9 SUZ12 (ENSG00000178691) #10 LRRC37B (ENSG00000185158) RHOT1 (ENSG00000126858) #16 RHBDL3 (ENSG00000141314) #17 C17orf75 (ENSG00000108666) #18 ZNF207 (ENSG00000010244) #19 PSMD11 (ENSG00000108671) #21 CDK5R1 (ENSG00000176749) #22 MYO1D (ENSG00000176658) #23 H2BN1 (ENSG00000290320) TMEM98 (ENSG00000006042) #24 SPACA3 (ENSG00000141316) #25 ASIC2 (ENSG00000108684) #26 CCL2 (ENSG00000108691) #27 CCL7 (ENSG00000108688) ##30 CCL11 (ENSG00000172156) ##30 CCL8 (ENSG00000108700) #28 CCL13 (ENSG00000181374) #29 CCL1 (ENSG00000108702) #30 TMEM132E (ENSG00000181291) #31 CCT6B (ENSG00000132141) #32 ZNF830 (ENSG00000198783) LIG3 (ENSG00000005156) #33 Orangutan MODERN SPECIES 8 OMG (ENSPPYG00000008148) ENSPPYG00000008146 RNF135 (ENSPPYG00000008145) #15 ADAP2 (ENSPPYG00000008144) #14 TEFM (ENSPPYG00000008143) #13 ATAD5 (ENSPPYG00000039479) #12 CRLF3 (ENSPPYG00000008142) #11 ENSPPYG00000040619 ENSPPYG00000008155 RHOT1 (ENSPPYG00000008157) #16 ENSPPYG00000008158 RHBDL3 (ENSPPYG00000008159) #17 C17H17orf75 (ENSPPYG00000008160) #18 ZNF207 (ENSPPYG00000008161) #19 PSMD11 (ENSPPYG00000008162) #21 CDK5R1 (ENSPPYG00000008163) #22 MYO1D (ENSPPYG00000008164) #23 TMEM98 (ENSPPYG00000008166) #24 SPACA3 (ENSPPYG00000008867) #25 ASIC2 (ENSPPYG00000008167) #26 CCL2 (ENSPPYG00000008169) #27 CCL7 (ENSPPYG00000008170) ##30 CCL11 (ENSPPYG00000008171) ##30 CCL8 (ENSPPYG00000029480) #28 CCL13 (ENSPPYG00000036667) #29 CCL1 (ENSPPYG00000041084) #30 TMEM132E (ENSPPYG00000008862) #31 CCT6B (ENSPPYG00000008174) #32 ZNF830 (ENSPPYG00000008175) LIG3 (ENSPPYG00000008176) #33 RFFL (ENSPPYG00000008177) #34 Cercopithecidae ANCESTRAL SPECIES 6 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Rhinopithecus ANCESTRAL SPECIES 125 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00390000006922.m.b.a.c.a ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00730000111572.b ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Golden snub-nosed monkey MODERN SPECIES 1659 ENSRROG00000039704 ATAD5 (ENSRROG00000040978) #12 TEFM (ENSRROG00000030422) #13 ADAP2 (ENSRROG00000033024) #14 RNF135 (ENSRROG00000043224) #15 ENSRROG00000043873 RHOT1 (ENSRROG00000041054) #16 ENSRROG00000009075 RHBDL3 (ENSRROG00000032686) #17 C17orf75 (ENSRROG00000035975) #18 ENSRROG00000037743 #19 PSMD11 (ENSRROG00000032071) #21 CDK5R1 (ENSRROG00000026898) #22 MYO1D (ENSRROG00000036278) #23 TMEM98 (ENSRROG00000044185) #24 SPACA3 (ENSRROG00000036513) #25 ASIC2 (ENSRROG00000036757) #26 Black snub-nosed monkey MODERN SPECIES 1024 UTP6 (ENSRBIG00000020822) #9 SUZ12 (ENSRBIG00000035000) #10 CRLF3 (ENSRBIG00000040685) #11 ENSRBIG00000043638 ATAD5 (ENSRBIG00000028803) #12 TEFM (ENSRBIG00000044300) #13 ADAP2 (ENSRBIG00000031583) #14 RNF135 (ENSRBIG00000032245) #15 ENSRBIG00000037919 RHOT1 (ENSRBIG00000028432) #16 ENSRBIG00000010676 RHBDL3 (ENSRBIG00000037522) #17 C17orf75 (ENSRBIG00000036493) #18 ZNF207 (ENSRBIG00000030664) #19 PSMD11 (ENSRBIG00000031642) #21 CDK5R1 (ENSRBIG00000029772) #22 MYO1D (ENSRBIG00000030384) #23 TMEM98 (ENSRBIG00000033509) #24 SPACA3 (ENSRBIG00000031083) #25 ENSRBIG00000011050 ASIC2 (ENSRBIG00000039882) #26 CCL2 (ENSRBIG00000039932) #27 CCL7 (ENSRBIG00000035832) ##30 CCL11 (ENSRBIG00000043002) ##30 CCL8 (ENSRBIG00000040497) #28 CCL13 (ENSRBIG00000037720) #29 CCL1 (ENSRBIG00000032049) #30 TMEM132E (ENSRBIG00000034726) #31 ZNF830 (ENSRBIG00000029713) CCT6B (ENSRBIG00000043772) #32 LIG3 (ENSRBIG00000029183) #33 Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Vervet Monkey MODERN SPECIES 7 UTP6 (ENSCSAG00000006595) #9 SUZ12 (ENSCSAG00000006586) #10 CRLF3 (ENSCSAG00000006577) #11 ATAD5 (ENSCSAG00000006541) #12 TEFM (ENSCSAG00000006512) #13 ADAP2 (ENSCSAG00000006503) #14 RNF135 (ENSCSAG00000006495) #15 ENSCSAG00000000559 RHOT1 (ENSCSAG00000006465) #16 RHBDL3 (ENSCSAG00000006421) #17 ENSCSAG00000000558 C17orf75 (ENSCSAG00000006408) #18 ZNF207 (ENSCSAG00000006379) #19 PSMD11 (ENSCSAG00000006373) #21 ENSCSAG00000000557 CDK5R1 (ENSCSAG00000006370) #22 MYO1D (ENSCSAG00000006369) #23 TMEM98 (ENSCSAG00000006365) #24 SPACA3 (ENSCSAG00000006362) #25 ASIC2 (ENSCSAG00000006357) #26 CCL2 (ENSCSAG00000006354) #27 CCL11 (ENSCSAG00000006352) ##30 CCL8 (ENSCSAG00000006350) #28 CCL13 (ENSCSAG00000006348) #29 CCL1 (ENSCSAG00000006347) #30 ENSCSAG00000006343 TMEM132E (ENSCSAG00000006340) #31 CCT6B (ENSCSAG00000006334) #32 ZNF830 (ENSCSAG00000000556) LIG3 (ENSCSAG00000006328) #33 RFFL (ENSCSAG00000006321) #34 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Macaca ANCESTRAL SPECIES 4 ENSGT00910000148586 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481.m #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Pig-tailed macaque MODERN SPECIES 116 COPRS (ENSMNEG00000042239) #8 UTP6 (ENSMNEG00000039480) #9 SUZ12 (ENSMNEG00000030008) #10 ENSMNEG00000032660 #11 ATAD5 (ENSMNEG00000041128) #12 TEFM (ENSMNEG00000037622) #13 ENSMNEG00000010597 ADAP2 (ENSMNEG00000033418) #14 RNF135 (ENSMNEG00000037190) #15 RHOT1 (ENSMNEG00000043417) #16 RHBDL3 (ENSMNEG00000024854) #17 C17orf75 (ENSMNEG00000043612) #18 ENSMNEG00000041308 #19 ENSMNEG00000044062 PSMD11 (ENSMNEG00000032399) #21 CDK5R1 (ENSMNEG00000024350) #22 MYO1D (ENSMNEG00000043394) #23 TMEM98 (ENSMNEG00000041204) #24 SPACA3 (ENSMNEG00000033069) #25 ENSMNEG00000045019 #26 ENSMNEG00000026560 ENSMNEG00000030615 ENSMNEG00000012290 ENSMNEG00000006241 ##26 CCL2 (ENSMNEG00000038921) #27 CCL7 (ENSMNEG00000036187) ##30 CCL11 (ENSMNEG00000028877) ##30 CCL8 (ENSMNEG00000040396) #28 CCL13 (ENSMNEG00000041760) #29 CCL1 (ENSMNEG00000043966) #30 TMEM132E (ENSMNEG00000029646) #31 Macaca_a ANCESTRAL SPECIES 4 ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.a.a.b.c.b ENSGT01040000240755.A.b.a.a ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481.m #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Rhesus MODERN SPECIES 7 COPRS (ENSMMUG00000057946) #8 UTP6 (ENSMMUG00000020403) #9 SUZ12 (ENSMMUG00000001116) #10 CRLF3 (ENSMMUG00000009069) #11 ATAD5 (ENSMMUG00000040177) #12 TEFM (ENSMMUG00000052827) #13 ADAP2 (ENSMMUG00000009077) #14 RNF135 (ENSMMUG00000007967) #15 RHOT1 (ENSMMUG00000018222) #16 RHBDL3 (ENSMMUG00000003158) #17 ENSMMUG00000054531 ENSMMUG00000058431 C16H17orf75 (ENSMMUG00000022379) #18 ZNF207 (ENSMMUG00000016875) #19 PSMD11 (ENSMMUG00000018962) #21 CDK5R1 (ENSMMUG00000009548) #22 MYO1D (ENSMMUG00000014689) #23 ENSMMUG00000059292 TMEM98 (ENSMMUG00000022356) #24 SPACA3 (ENSMMUG00000011411) #25 ASIC2 (ENSMMUG00000011413) #26 ENSMMUG00000002324 ENSMMUG00000062894 CCL2 (ENSMMUG00000000288) #27 CCL7 (ENSMMUG00000009782) ##30 CCL11 (ENSMMUG00000064793) ##30 ENSMMUG00000058490 CCL8 (ENSMMUG00000009784) #28 CCL13 (ENSMMUG00000009785) #29 CCL1 (ENSMMUG00000009786) #30 TMEM132E (ENSMMUG00000012977) #31 Crab-eating macaque MODERN SPECIES 7 UTP6 (ENSMFAG00000038842) #9 SUZ12 (ENSMFAG00000040091) #10 CRLF3 (ENSMFAG00000044393) #11 ATAD5 (ENSMFAG00000039082) #12 ENSMFAG00000063937 TEFM (ENSMFAG00000001938) #13 ENSMFAG00000059379 #14 RNF135 (ENSMFAG00000002510) #15 RHOT1 (ENSMFAG00000034504) #16 C17orf75 (ENSMFAG00000000431) #18 ENSMFAG00000048628 #18 ZNF207 (ENSMFAG00000001904) #19 RHBDL3 (ENSMFAG00000041020) #17 ENSMFAG00000057242 PSMD11 (ENSMFAG00000039747) #21 ENSMFAG00000048750 #22 MYO1D (ENSMFAG00000033021) #23 ENSMFAG00000055833 TMEM98 (ENSMFAG00000000693) #24 SPACA3 (ENSMFAG00000001727) #25 ASIC2 (ENSMFAG00000007668) #26 ENSMFAG00000059870 ENSMFAG00000053189 CCL2 (ENSMFAG00000053406) #27 CCL7 (ENSMFAG00000031903) ##30 CCL11 (ENSMFAG00000060137) ##30 CCL8 (ENSMFAG00000041874) #28 CCL13 (ENSMFAG00000002834) #29 CCL1 (ENSMFAG00000036643) #30 TMEM132E (ENSMFAG00000002538) #31 CCT6B (ENSMFAG00000038145) #32 Cercopithecinae_b ANCESTRAL SPECIES 33 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Olive baboon MODERN SPECIES 8 UTP6 (ENSPANG00000023113) #9 SUZ12 (ENSPANG00000023097) #10 CRLF3 (ENSPANG00000023099) #11 ATAD5 (ENSPANG00000023096) #12 TEFM (ENSPANG00000023094) #13 ADAP2 (ENSPANG00000023090) #14 ENSPANG00000035965 RNF135 (ENSPANG00000023083) #15 RHOT1 (ENSPANG00000023084) #16 RHBDL3 (ENSPANG00000023087) #17 ENSPANG00000016500 C17orf75 (ENSPANG00000023088) #18 ZNF207 (ENSPANG00000023027) #19 PSMD11 (ENSPANG00000023029) #21 ENSPANG00000013718 CDK5R1 (ENSPANG00000016542) #22 MYO1D (ENSPANG00000023030) #23 TMEM98 (ENSPANG00000023031) #24 SPACA3 (ENSPANG00000023033) #25 ASIC2 (ENSPANG00000023034) #26 CCL2 (ENSPANG00000051132) #27 CCL7 (ENSPANG00000038856) ##30 CCL11 (ENSPANG00000023037) ##30 CCL8 (ENSPANG00000044922) #28 CCL13 (ENSPANG00000023023) #29 CCL1 (ENSPANG00000045394) #30 TMEM132E (ENSPANG00000023021) #31 CCT6B (ENSPANG00000023018) #32 ZNF830 (ENSPANG00000023017) LIG3 (ENSPANG00000022999) #33 RFFL (ENSPANG00000023003) #34 Cercopithecinae_d ANCESTRAL SPECIES 98 ENSGT00390000007384 #8 ENSGT00390000016493.b.b #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00390000006548.b.k.lb ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000017697.a.m.b ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062.m #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Sooty mangabey MODERN SPECIES 145 ENSCATG00000017519 COPRS (ENSCATG00000034499) #8 UTP6 (ENSCATG00000034868) #9 SUZ12 (ENSCATG00000045058) #10 CRLF3 (ENSCATG00000033888) #11 ATAD5 (ENSCATG00000044730) #12 TEFM (ENSCATG00000044869) #13 ADAP2 (ENSCATG00000032362) #14 RNF135 (ENSCATG00000010095) #15 RHOT1 (ENSCATG00000036450) #16 ENSCATG00000038442 RHBDL3 (ENSCATG00000038200) #17 C17orf75 (ENSCATG00000016130) #18 ENSCATG00000031958 #19 PSMD11 (ENSCATG00000043638) #21 CDK5R1 (ENSCATG00000019620) #22 MYO1D (ENSCATG00000040334) #23 TMEM98 (ENSCATG00000039721) #24 SPACA3 (ENSCATG00000029915) #25 ASIC2 (ENSCATG00000035584) #26 CCL2 (ENSCATG00000043802) #27 CCL7 (ENSCATG00000038886) ##30 CCL11 (ENSCATG00000037948) ##30 CCL8 (ENSCATG00000039815) #28 CCL13 (ENSCATG00000037447) #29 CCL1 (ENSCATG00000043758) #30 TMEM132E (ENSCATG00000035833) #31 ZNF830 (ENSCATG00000002410) CCT6B (ENSCATG00000039984) #32 LIG3 (ENSCATG00000044619) #33 RFFL (ENSCATG00000037355) #34 Drill MODERN SPECIES 1098 ATAD5 (ENSMLEG00000000078) #12 TEFM (ENSMLEG00000042473) #13 ADAP2 (ENSMLEG00000034044) #14 ENSMLEG00000017585 RNF135 (ENSMLEG00000036696) #15 RHOT1 (ENSMLEG00000035757) #16 RHBDL3 (ENSMLEG00000032731) #17 ENSMLEG00000029859 ENSMLEG00000020349 ENSMLEG00000018149 #19 C17orf75 (ENSMLEG00000041614) #18 PSMD11 (ENSMLEG00000034425) #21 ENSMLEG00000026829 CDK5R1 (ENSMLEG00000008724) #22 MYO1D (ENSMLEG00000033057) #23 TMEM98 (ENSMLEG00000043246) #24 SPACA3 (ENSMLEG00000020226) #25 ASIC2 (ENSMLEG00000027675) #26 ENSMLEG00000023408 Euarchontoglires_A ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Glires ANCESTRAL SPECIES 3 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Rodentia ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Rodentia_B ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b.d ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Myomorpha ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01100000263482.F #30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b.d ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Muroidea ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b.d ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Muroidea_A ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Cricetidae ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Cricetinae ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Chinese hamster chok1gshd MODERN SPECIES 374 Evi2a (ENSCGRG00001001421) Nf1 (ENSCGRG00001015811) Rab11fip4 (ENSCGRG00001011772) #7 Utp6 (ENSCGRG00001000046) #9 Suz12 (ENSCGRG00001012460) #10 ENSCGRG00001008689 #11 Atad5 (ENSCGRG00001015531) #12 Tefm (ENSCGRG00001014415) #13 Adap2 (ENSCGRG00001013794) #14 ENSCGRG00001013219 #15 Rhot1 (ENSCGRG00001018128) #16 Rhbdl3 (ENSCGRG00001011616) #17 5730455P16Rik (ENSCGRG00001011069) #18 Zfp207 (ENSCGRG00001018133) #19 Psmd11 (ENSCGRG00001014740) #21 Cdk5r1 (ENSCGRG00001014057) #22 Myo1d (ENSCGRG00001020403) #23 Golden Hamster MODERN SPECIES 684 Evi2a (ENSMAUG00000011179) Nf1 (ENSMAUG00000021534) Rab11fip4 (ENSMAUG00000012204) #7 Utp6 (ENSMAUG00000021895) #9 Suz12 (ENSMAUG00000001677) #10 Crlf3 (ENSMAUG00000001238) #11 Atad5 (ENSMAUG00000019548) #12 Tefm (ENSMAUG00000006565) #13 Adap2 (ENSMAUG00000001797) #14 ENSMAUG00000022173 #15 Rhot1 (ENSMAUG00000021776) #16 Rhbdl3 (ENSMAUG00000020013) #17 5730455P16Rik (ENSMAUG00000007002) #18 Zfp207 (ENSMAUG00000008892) #19 Psmd11 (ENSMAUG00000019073) #21 Cdk5r1 (ENSMAUG00000021140) #22 ENSMAUG00000009545 Myo1d (ENSMAUG00000013009) #23 Tmem98 (ENSMAUG00000012837) #24 Spaca3 (ENSMAUG00000018445) #25 Asic2 (ENSMAUG00000010967) #26 Ccl2 (ENSMAUG00000020623) #27 ENSMAUG00000012536 Ccl7 (ENSMAUG00000011314) ##30 Ccl11 (ENSMAUG00000015725) ##30 Ccl12 (ENSMAUG00000013327) ##30 Ccl8 (ENSMAUG00000018176) ##30 ENSMAUG00000013646 #30 Tmem132e (ENSMAUG00000016009) #31 Cct6b (ENSMAUG00000001673) #32 Zfp830 (ENSMAUG00000012194) Cricetidae_B ANCESTRAL SPECIES ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Northern American deer mouse MODERN SPECIES 21 Evi2a (ENSPEMG00000009997) Rab11fip4 (ENSPEMG00000017840) #7 Utp6 (ENSPEMG00000014081) #9 Suz12 (ENSPEMG00000019235) #10 Crlf3 (ENSPEMG00000018811) #11 Atad5 (ENSPEMG00000012850) #12 Tefm (ENSPEMG00000016212) #13 Adap2 (ENSPEMG00000002187) #14 ENSPEMG00000018511 #15 Rhot1 (ENSPEMG00000015998) #16 Rhbdl3 (ENSPEMG00000017609) #17 5730455P16Rik (ENSPEMG00000007661) #18 ENSPEMG00000031231 Zfp207 (ENSPEMG00000009110) #19 Psmd11 (ENSPEMG00000015029) #21 Cdk5r1 (ENSPEMG00000004672) #22 Myo1d (ENSPEMG00000021437) #23 Tmem98 (ENSPEMG00000015639) #24 Spaca3 (ENSPEMG00000008847) #25 Asic2 (ENSPEMG00000022612) #26 ENSPEMG00000021078 Ccl2 (ENSPEMG00000024087) #27 Ccl7 (ENSPEMG00000022329) ##30 Ccl11 (ENSPEMG00000031393) ##30 Ccl12 (ENSPEMG00000018710) ##30 Ccl8 (ENSPEMG00000024303) ##30 ENSPEMG00000022558 Tmem132e (ENSPEMG00000016046) #31 Cct6b (ENSPEMG00000022000) #32 Zfp830 (ENSPEMG00000024107) Lig3 (ENSPEMG00000021826) #33 Prairie vole MODERN SPECIES 15 Nf1 (ENSMOCG00000013672) Rab11fip4 (ENSMOCG00000016866) #7 Utp6 (ENSMOCG00000014163) #9 Suz12 (ENSMOCG00000019023) #10 Crlf3 (ENSMOCG00000012869) #11 Atad5 (ENSMOCG00000003812) #12 Tefm (ENSMOCG00000000789) #13 Adap2 (ENSMOCG00000012833) #14 ENSMOCG00000008236 #15 Rhot1 (ENSMOCG00000018397) #16 Rhbdl3 (ENSMOCG00000018973) #17 5730455P16Rik (ENSMOCG00000020781) #18 Zfp207 (ENSMOCG00000017262) #19 ENSMOCG00000010820 #21 ENSMOCG00000012529 #21 Cdk5r1 (ENSMOCG00000001690) #22 Myo1d (ENSMOCG00000018702) #23 Tmem98 (ENSMOCG00000019650) #24 Spaca3 (ENSMOCG00000019356) #25 Asic2 (ENSMOCG00000011922) #26 Ccl2 (ENSMOCG00000017496) #27 Ccl7 (ENSMOCG00000014487) ##30 Ccl11 (ENSMOCG00000003156) ##30 Ccl12 (ENSMOCG00000009094) ##30 Ccl8 (ENSMOCG00000006845) ##30 Ccl1 (ENSMOCG00000005819) Tmem132e (ENSMOCG00000017883) #31 Cct6b (ENSMOCG00000015382) #32 Zfp830 (ENSMOCG00000002661) Lig3 (ENSMOCG00000013887) #33 Rffl (ENSMOCG00000005235) #34 Murinae ANCESTRAL SPECIES 6 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Mus ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Mus_A ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.q #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Mus_B ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.q #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Mus_C ANCESTRAL SPECIES 3 ENSGT00390000003004 ENSGT00550000074797.b ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a.q #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00900000143320 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.c.b ##30 ENSGT01100000263482.A.a.a.d.a.a.a.a.a ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 spretus MODERN SPECIES 2 MGP_SPRETEiJ_G0017669 Evi2a (MGP_SPRETEiJ_G0017670) Rab11fip4 (MGP_SPRETEiJ_G0017671) #7 Utp6 (MGP_SPRETEiJ_G0017672) #9 Suz12 (MGP_SPRETEiJ_G0017673) #10 Crlf3 (MGP_SPRETEiJ_G0017674) #11 Atad5 (MGP_SPRETEiJ_G0017675) #12 Tefm (MGP_SPRETEiJ_G0017676) #13 Adap2 (MGP_SPRETEiJ_G0017677) #14 Rnf135 (MGP_SPRETEiJ_G0017678) Rhot1 (MGP_SPRETEiJ_G0017679) #16 Rhbdl3 (MGP_SPRETEiJ_G0017680) #17 5730455P16Rik (MGP_SPRETEiJ_G0017681) #18 Zfp207 (MGP_SPRETEiJ_G0017682) #19 Psmd11 (MGP_SPRETEiJ_G0017683) #21 Cdk5r1 (MGP_SPRETEiJ_G0017684) #22 Myo1d (MGP_SPRETEiJ_G0017685) #23 Tmem98 (MGP_SPRETEiJ_G0017686) #24 Spaca3 (MGP_SPRETEiJ_G0017687) #25 Asic2 (MGP_SPRETEiJ_G0017688) #26 MGP_SPRETEiJ_G0017689 MGP_SPRETEiJ_G0017690 Ccl2 (MGP_SPRETEiJ_G0017691) #27 Ccl7 (MGP_SPRETEiJ_G0017692) ##30 Ccl11 (MGP_SPRETEiJ_G0017693) ##30 Ccl12 (MGP_SPRETEiJ_G0017694) ##30 Ccl8 (MGP_SPRETEiJ_G0017695) ##30 Ccl1 (MGP_SPRETEiJ_G0017696) Tmem132e (MGP_SPRETEiJ_G0017697) #31 Cct6b (MGP_SPRETEiJ_G0017698) #32 Zfp830 (MGP_SPRETEiJ_G0017699) Steppe mouse MODERN SPECIES 3351 Nf1 (ENSMSIG00000008704) Rab11fip4 (ENSMSIG00000008628) #7 ENSMSIG00000008597 Utp6 (ENSMSIG00000008510) #9 Suz12 (ENSMSIG00000008361) #10 Crlf3 (ENSMSIG00000008282) #11 Atad5 (ENSMSIG00000008129) #12 Tefm (ENSMSIG00000008088) #13 Adap2 (ENSMSIG00000008061) #14 Rnf135 (ENSMSIG00000008044) Rhot1 (ENSMSIG00000007800) #16 Rhbdl3 (ENSMSIG00000007754) #17 5730455P16Rik (ENSMSIG00000007744) #18 Zfp207 (ENSMSIG00000007459) #19 Psmd11 (ENSMSIG00000007357) #21 Cdk5r1 (ENSMSIG00000007341) #22 ENSMSIG00000007320 Myo1d (ENSMSIG00000007194) #23 Tmem98 (ENSMSIG00000007161) #24 Spaca3 (ENSMSIG00000007147) #25 ENSMSIG00000007120 Asic2 (ENSMSIG00000007029) #26 Ccl2 (ENSMSIG00000007015) #27 ENSMSIG00000006998 Ccl7 (ENSMSIG00000006992) ##30 Ccl11 (ENSMSIG00000006983) ##30 Ccl12 (ENSMSIG00000006962) ##30 Ccl8 (ENSMSIG00000006943) ##30 Ccl1 (ENSMSIG00000006904) Tmem132e (ENSMSIG00000006801) #31 ENSMSIG00000006783 Mouse MODERN SPECIES 2 Evi2b (ENSMUSG00000093938) Evi2a (ENSMUSG00000078771) Rab11fip4 (ENSMUSG00000017639) #7 Utp6 (ENSMUSG00000035575) #9 Suz12 (ENSMUSG00000017548) #10 Crlf3 (ENSMUSG00000017561) #11 Atad5 (ENSMUSG00000017550) #12 Tefm (ENSMUSG00000046909) #13 Adap2 (ENSMUSG00000020709) #14 Rnf135 (ENSMUSG00000020707) Rhot1 (ENSMUSG00000017686) #16 Rhbdl3 (ENSMUSG00000017692) #17 5730455P16Rik (ENSMUSG00000057181) #18 Zfp207 (ENSMUSG00000017421) #19 Psmd11 (ENSMUSG00000017428) #21 Cdk5r1 (ENSMUSG00000048895) #22 Myo1d (ENSMUSG00000035441) #23 Tmem98 (ENSMUSG00000035413) #24 Spaca3 (ENSMUSG00000053184) #25 Asic2 (ENSMUSG00000020704) #26 Ccl2 (ENSMUSG00000035385) #27 Ccl7 (ENSMUSG00000035373) ##30 Ccl11 (ENSMUSG00000020676) ##30 Ccl12 (ENSMUSG00000035352) ##30 Ccl8 (ENSMUSG00000009185) ##30 Ccl1 (ENSMUSG00000020702) Tmem132e (ENSMUSG00000020701) #31 Cct6b (ENSMUSG00000020698) #32 Zfp830 (ENSMUSG00000046010) Lig3 (ENSMUSG00000020697) #33 Rffl (ENSMUSG00000020696) #34 Ryukyu mouse MODERN SPECIES 2 MGP_CAROLIEiJ_G0016825 Evi2a (MGP_CAROLIEiJ_G0016826) Rab11fip4 (MGP_CAROLIEiJ_G0016827) #7 Utp6 (MGP_CAROLIEiJ_G0016828) #9 Suz12 (MGP_CAROLIEiJ_G0016829) #10 Crlf3 (MGP_CAROLIEiJ_G0016830) #11 Atad5 (MGP_CAROLIEiJ_G0016831) #12 Tefm (MGP_CAROLIEiJ_G0016832) #13 Adap2 (MGP_CAROLIEiJ_G0016833) #14 Rnf135 (MGP_CAROLIEiJ_G0016834) Rhot1 (MGP_CAROLIEiJ_G0016835) #16 Rhbdl3 (MGP_CAROLIEiJ_G0016836) #17 5730455P16Rik (MGP_CAROLIEiJ_G0016837) #18 Zfp207 (MGP_CAROLIEiJ_G0016838) #19 Psmd11 (MGP_CAROLIEiJ_G0016839) #21 Cdk5r1 (MGP_CAROLIEiJ_G0016840) #22 Myo1d (MGP_CAROLIEiJ_G0016841) #23 Tmem98 (MGP_CAROLIEiJ_G0016842) #24 Spaca3 (MGP_CAROLIEiJ_G0016843) #25 Asic2 (MGP_CAROLIEiJ_G0016844) #26 MGP_CAROLIEiJ_G0016845 MGP_CAROLIEiJ_G0016846 Ccl2 (MGP_CAROLIEiJ_G0016847) #27 Ccl7 (MGP_CAROLIEiJ_G0016848) ##30 Ccl11 (MGP_CAROLIEiJ_G0016849) ##30 Ccl12 (MGP_CAROLIEiJ_G0016850) ##30 Ccl8 (MGP_CAROLIEiJ_G0016851) ##30 Ccl1 (MGP_CAROLIEiJ_G0016852) Tmem132e (MGP_CAROLIEiJ_G0016853) #31 Cct6b (MGP_CAROLIEiJ_G0016854) #32 Zfp830 (MGP_CAROLIEiJ_G0016855) Shrew mouse MODERN SPECIES 5 MGP_PahariEiJ_G0017962 Evi2a (MGP_PahariEiJ_G0017963) Rab11fip4 (MGP_PahariEiJ_G0017964) #7 Utp6 (MGP_PahariEiJ_G0017965) #9 Suz12 (MGP_PahariEiJ_G0017966) #10 Crlf3 (MGP_PahariEiJ_G0017967) #11 Atad5 (MGP_PahariEiJ_G0017968) #12 Tefm (MGP_PahariEiJ_G0017969) #13 Adap2 (MGP_PahariEiJ_G0017970) #14 Rnf135 (MGP_PahariEiJ_G0017971) Rhot1 (MGP_PahariEiJ_G0017972) #16 MGP_PahariEiJ_G0017973 #17 5730455P16Rik (MGP_PahariEiJ_G0017974) #18 Zfp207 (MGP_PahariEiJ_G0017975) #19 Psmd11 (MGP_PahariEiJ_G0017976) #21 Cdk5r1 (MGP_PahariEiJ_G0017977) #22 Myo1d (MGP_PahariEiJ_G0017978) #23 Tmem98 (MGP_PahariEiJ_G0017979) #24 Spaca3 (MGP_PahariEiJ_G0017980) #25 Asic2 (MGP_PahariEiJ_G0017981) #26 MGP_PahariEiJ_G0017982 MGP_PahariEiJ_G0017983 Ccl2 (MGP_PahariEiJ_G0017984) #27 Ccl7 (MGP_PahariEiJ_G0017985) ##30 Ccl11 (MGP_PahariEiJ_G0017986) ##30 MGP_PahariEiJ_G0017987 ##30 MGP_PahariEiJ_G0017988 ##30 Ccl1 (MGP_PahariEiJ_G0017989) Tmem132e (MGP_PahariEiJ_G0017990) #31 Cct6b (MGP_PahariEiJ_G0017991) #32 Zfp830 (MGP_PahariEiJ_G0017992) Rat MODERN SPECIES 1 Evi2a (ENSRNOG00000022764) Rab11fip4 (ENSRNOG00000014135) #7 ENSRNOG00000069468 Utp6 (ENSRNOG00000014209) #9 LOC120095270 (ENSRNOG00000029115) ENSRNOG00000069932 Suz12 (ENSRNOG00000058663) #10 Crlf3 (ENSRNOG00000050657) #11 Atad5 (ENSRNOG00000021903) #12 Tefm (ENSRNOG00000004000) #13 Adap2 (ENSRNOG00000037148) #14 Rhot1 (ENSRNOG00000004093) #16 Rhbdl3 (ENSRNOG00000005515) #17 RGD1310429 (ENSRNOG00000000237) #18 Psmd11 (ENSRNOG00000005538) #21 Cdk5r1 (ENSRNOG00000068243) #22 Myo1d (ENSRNOG00000003276) #23 Tmem98 (ENSRNOG00000021316) #24 Spaca3 (ENSRNOG00000006994) #25 Asic2 (ENSRNOG00000058308) #26 AABR07030122.1 (ENSRNOG00000030217) ENSRNOG00000063667 ENSRNOG00000068272 Ccl2 (ENSRNOG00000007159) #27 Ccl7 (ENSRNOG00000000239) ##30 Ccl11 (ENSRNOG00000007335) ##30 Ccl12 (ENSRNOG00000029768) ##30 Ccl1 (ENSRNOG00000021851) Tmem132e (ENSRNOG00000007455) #31 Cct6b (ENSRNOG00000007523) #32 AC095947.1 (ENSRNOG00000030291) Upper Galilee mountains blind mole rat MODERN SPECIES 1422 Rhot1 (ENSNGAG00000002156) #16 Rhbdl3 (ENSNGAG00000011451) #17 5730455P16Rik (ENSNGAG00000008162) #18 ENSNGAG00000018144 #19 Psmd11 (ENSNGAG00000007349) #21 Cdk5r1 (ENSNGAG00000015681) #22 Myo1d (ENSNGAG00000014753) #23 Tmem98 (ENSNGAG00000000432) #24 Spaca3 (ENSNGAG00000019287) #25 Asic2 (ENSNGAG00000017605) #26 Ccl2 (ENSNGAG00000013703) #27 Ccl7 (ENSNGAG00000012785) ##30 ENSNGAG00000010601 ##30 Ccl12 (ENSNGAG00000015220) ##30 ENSNGAG00000008109 ##30 Ccl1 (ENSNGAG00000003526) Tmem132e (ENSNGAG00000014402) #31 ENSNGAG00000017447 Cct6b (ENSNGAG00000011636) #32 Zfp830 (ENSNGAG00000014849) Lig3 (ENSNGAG00000019767) #33 Lesser Egyptian jerboa MODERN SPECIES 112 ENSJJAG00000017336 ENSJJAG00000024274 Omg (ENSJJAG00000007985) Nf1 (ENSJJAG00000013929) Rab11fip4 (ENSJJAG00000019657) #7 Utp6 (ENSJJAG00000013572) #9 Suz12 (ENSJJAG00000018934) #10 Atad5 (ENSJJAG00000015228) #12 Adap2 (ENSJJAG00000015864) #14 ENSJJAG00000023784 #15 Rhot1 (ENSJJAG00000010112) #16 Rhbdl3 (ENSJJAG00000010070) #17 ENSJJAG00000023980 #18 ENSJJAG00000017956 Psmd11 (ENSJJAG00000015236) #21 Cdk5r1 (ENSJJAG00000010662) #22 Myo1d (ENSJJAG00000015684) #23 Tmem98 (ENSJJAG00000017013) #24 Spaca3 (ENSJJAG00000023074) #25 ENSJJAG00000022033 Asic2 (ENSJJAG00000016957) #26 Ccl12 (ENSJJAG00000003016) ##30 ENSJJAG00000016181 ##30 Tmem132e (ENSJJAG00000018290) #31 Cct6b (ENSJJAG00000014826) #32 Zfp830 (ENSJJAG00000010210) Lig3 (ENSJJAG00000003848) #33 Rffl (ENSJJAG00000020929) #34 Rad51d (ENSJJAG00000014931) #35 Fndc8 (ENSJJAG00000018336) #36 Nle1 (ENSJJAG00000008356) #37 Kangaroo rat MODERN SPECIES 350 Evi2a (ENSDORG00000026168) Nf1 (ENSDORG00000011467) Rab11fip4 (ENSDORG00000011807) #7 Utp6 (ENSDORG00000003843) #9 Suz12 (ENSDORG00000000460) #10 Crlf3 (ENSDORG00000015909) #11 Atad5 (ENSDORG00000000344) #12 Tefm (ENSDORG00000000352) #13 Adap2 (ENSDORG00000006678) #14 ENSDORG00000025558 #15 Rhot1 (ENSDORG00000001407) #16 Rhbdl3 (ENSDORG00000024743) #17 5730455P16Rik (ENSDORG00000007133) #18 Zfp207 (ENSDORG00000007139) #19 Psmd11 (ENSDORG00000011438) #21 Cdk5r1 (ENSDORG00000011445) #22 Myo1d (ENSDORG00000011446) #23 Tmem98 (ENSDORG00000026828) #24 Spaca3 (ENSDORG00000015899) #25 Asic2 (ENSDORG00000015901) #26 Ccl7 (ENSDORG00000003289) ##30 ENSDORG00000007302 ##30 Tmem132e (ENSDORG00000006863) #31 Rodentia_A ANCESTRAL SPECIES 3 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Hystricomorpha ANCESTRAL SPECIES 3 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.c.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a.b ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Naked mole-rat female MODERN SPECIES 12 LPO (ENSHGLG00000018067) MKS1 (ENSHGLG00000012631) ENSHGLG00000037944 ENSHGLG00000045253 ##30 ENSHGLG00000010660 #13 ENSHGLG00000009908 #12 ENSHGLG00000010534 ENSHGLG00000010961 #14 ENSHGLG00000041636 #15 RHOT1 (ENSHGLG00000011785) #16 ENSHGLG00000049011 #17 C17orf75 (ENSHGLG00000019463) #18 ENSHGLG00000002460 ZNF207 (ENSHGLG00000019501) #19 PSMD11 (ENSHGLG00000019505) #21 CDK5R1 (ENSHGLG00000037917) #22 MYO1D (ENSHGLG00000015796) #23 TMEM98 (ENSHGLG00000015858) #24 SPACA3 (ENSHGLG00000015911) #25 ASIC2 (ENSHGLG00000000958) #26 CCL2 (ENSHGLG00000034308) ##30 CCL11 (ENSHGLG00000001015) ##30 ENSHGLG00000001025 ##30 ENSHGLG00000042122 Lig3 (ENSHGLG00000001349) #33 ENSHGLG00000001734 #34 RAD51D (ENSHGLG00000001857) #35 FNDC8 (ENSHGLG00000001963) #36 NLE1 (ENSHGLG00000002006) #37 UNC45B (ENSHGLG00000002117) ENSHGLG00000039133 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.c.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a.b ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Guinea pig MODERN SPECIES 32 RAB11FIP4 (ENSCPOG00000011634) #7 COPRS (ENSCPOG00000006018) #8 UTP6 (ENSCPOG00000014294) #9 ENSCPOG00000034287 SUZ12 (ENSCPOG00000024628) #10 CRLF3 (ENSCPOG00000008693) #11 ATAD5 (ENSCPOG00000011900) #12 TEFM (ENSCPOG00000011909) #13 ADAP2 (ENSCPOG00000004369) #14 RNF135 (ENSCPOG00000004880) #15 RHOT1 (ENSCPOG00000007927) #16 RHBDL3 (ENSCPOG00000022880) #17 C17orf75 (ENSCPOG00000013162) #18 ZNF207 (ENSCPOG00000001728) #19 PSMD11 (ENSCPOG00000009798) #21 CDK5R1 (ENSCPOG00000020676) #22 MYO1D (ENSCPOG00000000149) #23 TMEM98 (ENSCPOG00000000153) #24 SPACA3 (ENSCPOG00000027605) #25 ASIC2 (ENSCPOG00000025132) #26 ENSCPOG00000033808 ##30 ENSCPOG00000013468 ##30 CCL7 (ENSCPOG00000013035) ##30 CCL11 (ENSCPOG00000032138) ##30 ENSCPOG00000033402 ##30 TMEM132E (ENSCPOG00000001908) #31 CCT6B (ENSCPOG00000002794) #32 ZNF830 (ENSCPOG00000031218) LIG3 (ENSCPOG00000013032) #33 RFFL (ENSCPOG00000022966) #34 RAD51D (ENSCPOG00000025259) #35 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.c.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a.b ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Long-tailed chinchilla MODERN SPECIES 188 EVI2A (ENSCLAG00000013303) RAB11FIP4 (ENSCLAG00000012724) #7 COPRS (ENSCLAG00000013385) #8 UTP6 (ENSCLAG00000007274) #9 SUZ12 (ENSCLAG00000008281) #10 CRLF3 (ENSCLAG00000009651) #11 ATAD5 (ENSCLAG00000009928) #12 TEFM (ENSCLAG00000006597) #13 ADAP2 (ENSCLAG00000005862) #14 ENSCLAG00000007154 #15 RHOT1 (ENSCLAG00000007856) #16 RHBDL3 (ENSCLAG00000008877) #17 C17orf75 (ENSCLAG00000007683) #18 ZNF207 (ENSCLAG00000006441) #19 PSMD11 (ENSCLAG00000009489) #21 CDK5R1 (ENSCLAG00000017838) #22 MYO1D (ENSCLAG00000009101) #23 TMEM98 (ENSCLAG00000007965) #24 SPACA3 (ENSCLAG00000008459) #25 ASIC2 (ENSCLAG00000004876) #26 ENSCLAG00000005731 ##30 ENSCLAG00000006066 ##30 CCL11 (ENSCLAG00000004752) ##30 ENSCLAG00000005107 ##30 ENSCLAG00000006411 TMEM132E (ENSCLAG00000006946) #31 CCT6B (ENSCLAG00000014724) #32 ZNF830 (ENSCLAG00000017672) LIG3 (ENSCLAG00000009138) #33 RFFL (ENSCLAG00000010681) #34 RAD51D (ENSCLAG00000004975) #35 Degu MODERN SPECIES 113 RAB11FIP4 (ENSODEG00000015676) #7 ENSODEG00000012209 COPRS (ENSODEG00000011871) #8 UTP6 (ENSODEG00000011971) #9 SUZ12 (ENSODEG00000013459) #10 ENSODEG00000013349 #11 ATAD5 (ENSODEG00000014008) #12 ADAP2 (ENSODEG00000011944) #14 ENSODEG00000013107 #15 RHOT1 (ENSODEG00000012674) #16 RHBDL3 (ENSODEG00000012800) #17 C17orf75 (ENSODEG00000012638) #18 ZNF207 (ENSODEG00000012683) #19 ENSODEG00000013615 #21 ENSODEG00000014487 #21 CDK5R1 (ENSODEG00000020159) #22 MYO1D (ENSODEG00000012420) #23 TMEM98 (ENSODEG00000012273) #24 ENSODEG00000012654 #25 ASIC2 (ENSODEG00000012964) #26 CCL11 (ENSODEG00000013280) ##30 ENSODEG00000013352 TMEM132E (ENSODEG00000013225) #31 CCT6B (ENSODEG00000013365) #32 ENSODEG00000020133 ZNF830 (ENSODEG00000012121) LIG3 (ENSODEG00000014335) #33 RFFL (ENSODEG00000013992) #34 RAD51D (ENSODEG00000014400) #35 NLE1 (ENSODEG00000015154) #37 UNC45B (ENSODEG00000013654) Sciuridae ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Marmotini ANCESTRAL SPECIES 39 ENSGT00440000033742.a.b #7 ENSGT01000000215472 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Alpin marmot MODERN SPECIES 71 ENSMMMG00000012772 RAB11FIP4 (ENSMMMG00000012781) #7 ENSMMMG00000012799 COPRS (ENSMMMG00000012825) #8 UTP6 (ENSMMMG00000012830) #9 SUZ12 (ENSMMMG00000012866) #10 CRLF3 (ENSMMMG00000012930) #11 TEFM (ENSMMMG00000012960) #13 ADAP2 (ENSMMMG00000012962) #14 RNF135 (ENSMMMG00000012984) #15 RHOT1 (ENSMMMG00000013006) #16 RHBDL3 (ENSMMMG00000013354) #17 C17orf75 (ENSMMMG00000013368) #18 ZNF207 (ENSMMMG00000013387) #19 PSMD11 (ENSMMMG00000013441) #21 CDK5R1 (ENSMMMG00000013447) #22 MYO1D (ENSMMMG00000013449) #23 ENSMMMG00000013474 #24 SPACA3 (ENSMMMG00000013483) #25 ASIC2 (ENSMMMG00000013492) #26 ENSMMMG00000013509 #27 CCL7 (ENSMMMG00000013514) ##30 CCL11 (ENSMMMG00000013522) ##30 ENSMMMG00000013534 ##30 ENSMMMG00000013542 ENSMMMG00000013547 #31 CCT6B (ENSMMMG00000013567) #32 ZNF830 (ENSMMMG00000013592) LIG3 (ENSMMMG00000013596) #33 RFFL (ENSMMMG00000013887) #34 RAD51D (ENSMMMG00000013919) #35 Marmotini_b ANCESTRAL SPECIES 34 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057.q #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.c.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Squirrel MODERN SPECIES 138 NF1 (ENSSTOG00000034066) RAB11FIP4 (ENSSTOG00000010883) #7 COPRS (ENSSTOG00000025397) #8 UTP6 (ENSSTOG00000015875) #9 SUZ12 (ENSSTOG00000022754) #10 CRLF3 (ENSSTOG00000012342) #11 ATAD5 (ENSSTOG00000025411) #12 TEFM (ENSSTOG00000012367) #13 ADAP2 (ENSSTOG00000025811) #14 RNF135 (ENSSTOG00000027338) #15 RHOT1 (ENSSTOG00000011738) #16 RHBDL3 (ENSSTOG00000000698) #17 C17orf75 (ENSSTOG00000000705) #18 ENSSTOG00000000712 #19 PSMD11 (ENSSTOG00000009686) #21 CDK5R1 (ENSSTOG00000009703) #22 MYO1D (ENSSTOG00000000438) #23 TMEM98 (ENSSTOG00000011945) #24 ASIC2 (ENSSTOG00000027185) #26 ENSSTOG00000028166 #27 CCL7 (ENSSTOG00000032557) ##30 CCL11 (ENSSTOG00000012718) ##30 ENSSTOG00000023292 ##30 CCL1 (ENSSTOG00000007409) #30 TMEM132E (ENSSTOG00000024193) #31 CCT6B (ENSSTOG00000027687) #32 ZNF830 (ENSSTOG00000006057) LIG3 (ENSSTOG00000006065) #33 RFFL (ENSSTOG00000006115) #34 RAD51D (ENSSTOG00000006142) #35 FNDC8 (ENSSTOG00000006165) #36 Arctic ground squirrel MODERN SPECIES 63 RAB11FIP4 (ENSUPAG00010022484) #7 ENSUPAG00010022485 COPRS (ENSUPAG00010022492) #8 ENSUPAG00010022494 #9 SUZ12 (ENSUPAG00010022503) #10 CRLF3 (ENSUPAG00010022508) #11 ATAD5 (ENSUPAG00010022514) #12 TEFM (ENSUPAG00010022537) #13 ADAP2 (ENSUPAG00010022538) #14 RNF135 (ENSUPAG00010022541) #15 RHOT1 (ENSUPAG00010022548) #16 RHBDL3 (ENSUPAG00010023045) #17 C17orf75 (ENSUPAG00010023047) #18 ZNF207 (ENSUPAG00010023051) #19 PSMD11 (ENSUPAG00010023057) #21 CDK5R1 (ENSUPAG00010023059) #22 MYO1D (ENSUPAG00010023060) #23 TMEM98 (ENSUPAG00010023062) #24 SPACA3 (ENSUPAG00010023063) #25 ASIC2 (ENSUPAG00010023064) #26 Eurasian red squirrel MODERN SPECIES 12 EVI2A (ENSSVLG00005015311) RAB11FIP4 (ENSSVLG00005015383) #7 COPRS (ENSSVLG00005015650) #8 UTP6 (ENSSVLG00005015715) #9 SUZ12 (ENSSVLG00005015781) #10 CRLF3 (ENSSVLG00005016089) #11 ATAD5 (ENSSVLG00005016127) #12 TEFM (ENSSVLG00005016323) #13 ADAP2 (ENSSVLG00005016368) #14 RNF135 (ENSSVLG00005016571) #15 RHOT1 (ENSSVLG00005016781) #16 RHBDL3 (ENSSVLG00005016946) #17 C17orf75 (ENSSVLG00005017088) #18 ZNF207 (ENSSVLG00005017171) #19 ENSSVLG00005017498 #21 CDK5R1 (ENSSVLG00005017534) #22 MYO1D (ENSSVLG00005017566) #23 ENSSVLG00005017677 TMEM98 (ENSSVLG00005017715) #24 ENSSVLG00005017765 #25 ASIC2 (ENSSVLG00005017834) #26 ENSSVLG00005018047 ENSSVLG00005018082 ENSSVLG00005018128 ENSSVLG00005018180 ENSSVLG00005018242 ENSSVLG00005018284 ENSSVLG00005018440 ENSSVLG00005018536 ENSSVLG00005018675 ENSSVLG00005018739 Laurasiatheria ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 Eulipotyphla ANCESTRAL SPECIES 1494 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 Common shrew MODERN SPECIES 5547 CDK5R1 (ENSSARG00000009514) #22 ENSSARG00000009534 MYO1D (ENSSARG00000009547) #23 Laurasiatheria_a ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Artiodactyla ANCESTRAL SPECIES 4 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Suina ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Chacoan peccary MODERN SPECIES 144 C17orf75 (ENSCWAG00000013929) #18 ZNF207 (ENSCWAG00000013991) #19 PSMD11 (ENSCWAG00000014200) #21 CDK5R1 (ENSCWAG00000014253) #22 MYO1D (ENSCWAG00000014304) #23 TMEM98 (ENSCWAG00000014817) #24 SPACA3 (ENSCWAG00000014931) #25 ASIC2 (ENSCWAG00000015037) #26 CCL2 (ENSCWAG00000015205) #27 CCL11 (ENSCWAG00000015240) ##30 CCL8 (ENSCWAG00000015268) #28 ENSCWAG00000015299 TMEM132E (ENSCWAG00000015350) #31 CCT6B (ENSCWAG00000015565) #32 ZNF830 (ENSCWAG00000015919) LIG3 (ENSCWAG00000015948) #33 RFFL (ENSCWAG00000016017) #34 RAD51D (ENSCWAG00000016105) #35 FNDC8 (ENSCWAG00000016272) #36 Pig MODERN SPECIES 3 NF1 (ENSSSCG00000017748) RAB11FIP4 (ENSSSCG00000017747) #7 COPRS (ENSSSCG00000061452) #8 UTP6 (ENSSSCG00000017745) #9 SUZ12 (ENSSSCG00000017744) #10 CRLF3 (ENSSSCG00000017743) #11 ATAD5 (ENSSSCG00000035954) #12 TEFM (ENSSSCG00000017741) #13 ADAP2 (ENSSSCG00000017738) #14 RNF135 (ENSSSCG00000017737) #15 RHOT1 (ENSSSCG00000017735) #16 RHBDL3 (ENSSSCG00000017734) #17 C17orf75 (ENSSSCG00000017733) #18 ZNF207 (ENSSSCG00000017732) #19 PSMD11 (ENSSSCG00000017731) #21 CDK5R1 (ENSSSCG00000017730) #22 MYO1D (ENSSSCG00000017728) #23 TMEM98 (ENSSSCG00000017727) #24 SPACA3 (ENSSSCG00000017726) #25 ASIC2 (ENSSSCG00000040177) #26 ENSSSCG00000058804 ENSSSCG00000034396 ENSSSCG00000031620 CCL2 (ENSSSCG00000017723) #27 CCL11 (ENSSSCG00000044762) ##30 CCL8 (ENSSSCG00000040648) #28 CCL1 (ENSSSCG00000017720) TMEM132E (ENSSSCG00000022987) #31 CCT6B (ENSSSCG00000022196) #32 ZNF830 (ENSSSCG00000056119) LIG3 (ENSSSCG00000024770) #33 Artiodactyla_a ANCESTRAL SPECIES 3 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Camelidae ANCESTRAL SPECIES 46 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Arabian camel MODERN SPECIES 7 EVI2A (ENSCDRG00005016797) ENSCDRG00005016822 #7 COPRS (ENSCDRG00005016899) #8 UTP6 (ENSCDRG00005016986) #9 SUZ12 (ENSCDRG00005017103) #10 CRLF3 (ENSCDRG00005017225) #11 ENSCDRG00005017338 ATAD5 (ENSCDRG00005017353) #12 TEFM (ENSCDRG00005017496) #13 ADAP2 (ENSCDRG00005017539) #14 RHOT1 (ENSCDRG00005017659) #16 RHBDL3 (ENSCDRG00005017971) #17 C17orf75 (ENSCDRG00005018024) #18 ENSCDRG00005018176 #19 PSMD11 (ENSCDRG00005018315) #21 CDK5R1 (ENSCDRG00005018360) #22 MYO1D (ENSCDRG00005018383) #23 TMEM98 (ENSCDRG00005018566) #24 ENSCDRG00005018607 #25 ENSCDRG00005018651 #25 ASIC2 (ENSCDRG00005018676) #26 CCL2 (ENSCDRG00005018730) #27 ENSCDRG00005018754 ##30 CCL8 (ENSCDRG00005018771) #28 ENSCDRG00005018782 TMEM132E (ENSCDRG00005018809) #31 CCT6B (ENSCDRG00005018987) #32 ZNF830 (ENSCDRG00005019235) LIG3 (ENSCDRG00005019260) #33 RFFL (ENSCDRG00005019298) #34 RAD51D (ENSCDRG00005008720) #35 Artiodactyla_b ANCESTRAL SPECIES 3 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Pecora ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Yarkand deer MODERN SPECIES 28 NF1 (ENSCHYG00000007674) RAB11FIP4 (ENSCHYG00000007539) #7 ENSCHYG00000007474 COPRS (ENSCHYG00000007434) #8 ENSCHYG00000007381 #9 SUZ12 (ENSCHYG00000006992) #10 CRLF3 (ENSCHYG00000006890) #11 ATAD5 (ENSCHYG00000006843) #12 TEFM (ENSCHYG00000006805) #13 RNF135 (ENSCHYG00000006620) #15 RHOT1 (ENSCHYG00000006284) #16 RHBDL3 (ENSCHYG00000006168) #17 C17orf75 (ENSCHYG00000006089) #18 ZNF207 (ENSCHYG00000005793) #19 PSMD11 (ENSCHYG00000005685) #21 CDK5R1 (ENSCHYG00000005666) #22 MYO1D (ENSCHYG00000005522) #23 TMEM98 (ENSCHYG00000005448) #24 SPACA3 (ENSCHYG00000005400) #25 ENSCHYG00000005385 ENSCHYG00000005365 ASIC2 (ENSCHYG00000005233) #26 CCL2 (ENSCHYG00000004987) #27 CCL11 (ENSCHYG00000004959) ##30 ENSCHYG00000004663 #28 ENSCHYG00000004652 TMEM132E (ENSCHYG00000004615) #31 CCT6B (ENSCHYG00000004528) #32 ZNF830 (ENSCHYG00000004488) LIG3 (ENSCHYG00000004420) #33 ENSCHYG00000004295 #35 Percora_a ANCESTRAL SPECIES 2 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 Siberian musk deer MODERN SPECIES 1135 RAB11FIP4 (ENSMMSG00000014971) #7 COPRS (ENSMMSG00000014900) #8 ENSMMSG00000014848 #9 SUZ12 (ENSMMSG00000014732) #10 ENSMMSG00000014703 CRLF3 (ENSMMSG00000014680) #11 ATAD5 (ENSMMSG00000014589) #12 TEFM (ENSMMSG00000014559) #13 ADAP2 (ENSMMSG00000014535) #14 RNF135 (ENSMMSG00000014522) #15 RHOT1 (ENSMMSG00000014399) #16 RHBDL3 (ENSMMSG00000014303) #17 C17orf75 (ENSMMSG00000014275) #18 ZNF207 (ENSMMSG00000014169) #19 PSMD11 (ENSMMSG00000014125) #21 CDK5R1 (ENSMMSG00000014112) #22 MYO1D (ENSMMSG00000014045) #23 TMEM98 (ENSMMSG00000013992) #24 SPACA3 (ENSMMSG00000013944) #25 ASIC2 (ENSMMSG00000013849) #26 CCL2 (ENSMMSG00000013816) #27 CCL11 (ENSMMSG00000013803) ##30 CCL8 (ENSMMSG00000013783) #28 CCL1 (ENSMMSG00000013764) #30 ENSMMSG00000013748 TMEM132E (ENSMMSG00000013674) #31 CCT6B (ENSMMSG00000013474) #32 ZNF830 (ENSMMSG00000013439) LIG3 (ENSMMSG00000013344) #33 RFFL (ENSMMSG00000013303) #34 ENSMMSG00000013244 #35 Bovidae ANCESTRAL SPECIES 2 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 Caprinae ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 Goat MODERN SPECIES 10 RAB11FIP4 (ENSCHIG00000019966) #7 ENSCHIG00000012864 COPRS (ENSCHIG00000018532) #8 ENSCHIG00000017954 #9 SUZ12 (ENSCHIG00000026246) #10 CRLF3 (ENSCHIG00000021351) #11 ATAD5 (ENSCHIG00000016940) #12 TEFM (ENSCHIG00000024685) #13 ADAP2 (ENSCHIG00000011945) #14 RNF135 (ENSCHIG00000022049) #15 RHOT1 (ENSCHIG00000015707) #16 RHBDL3 (ENSCHIG00000025504) #17 C17orf75 (ENSCHIG00000024915) #18 ZNF207 (ENSCHIG00000013026) #19 PSMD11 (ENSCHIG00000008139) #21 CDK5R1 (ENSCHIG00000004376) #22 MYO1D (ENSCHIG00000014922) #23 TMEM98 (ENSCHIG00000027044) #24 SPACA3 (ENSCHIG00000014732) #25 ASIC2 (ENSCHIG00000026032) #26 ENSCHIG00000014289 ##26 CCL2 (ENSCHIG00000023567) #27 CCL11 (ENSCHIG00000012968) ##30 CCL8 (ENSCHIG00000020074) #28 ENSCHIG00000002408 TMEM132E (ENSCHIG00000015468) #31 CCT6B (ENSCHIG00000023739) #32 ZNF830 (ENSCHIG00000012740) LIG3 (ENSCHIG00000023884) #33 RFFL (ENSCHIG00000012667) #34 ENSCHIG00000019605 #35 Rambouillet Sheep MODERN SPECIES 2 RAB11FIP4 (ENSOARG00020010743) #7 ENSOARG00020011158 #8 ENSOARG00020011224 #8 UTP6 (ENSOARG00020011367) #9 SUZ12 (ENSOARG00020011487) #10 CRLF3 (ENSOARG00020011795) #11 ENSOARG00020011916 TEFM (ENSOARG00020011981) #13 ADAP2 (ENSOARG00020012053) #14 RNF135 (ENSOARG00020012111) #15 RHOT1 (ENSOARG00020012187) #16 RHBDL3 (ENSOARG00020012523) #17 C17orf75 (ENSOARG00020012947) #18 ZNF207 (ENSOARG00020013074) #19 PSMD11 (ENSOARG00020013882) #21 CDK5R1 (ENSOARG00020014060) #22 MYO1D (ENSOARG00020014169) #23 RPS26 (ENSOARG00020016985) TMEM98 (ENSOARG00020017022) #24 SPACA3 (ENSOARG00020017184) #25 ASIC2 (ENSOARG00020017317) #26 CCL2 (ENSOARG00020017573) #27 CCL11 (ENSOARG00020017624) ##30 CCL8 (ENSOARG00020017661) #28 CCL1 (ENSOARG00020017691) #30 TMEM132E (ENSOARG00020017730) #31 CCT6B (ENSOARG00020018028) #32 ZNF830 (ENSOARG00020018540) LIG3 (ENSOARG00020018561) #33 RFFL (ENSOARG00020018710) #34 ENSOARG00020018814 #35 Bovinae ANCESTRAL SPECIES ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 ENSGT00390000006458 #36 American bison MODERN SPECIES 3331 ENSBBBG00000016891 COPRS (ENSBBBG00000016861) #8 ENSBBBG00000004167 #9 SUZ12 (ENSBBBG00000004153) #10 CRLF3 (ENSBBBG00000007423) #11 ENSBBBG00000016709 ATAD5 (ENSBBBG00000016688) #12 TEFM (ENSBBBG00000016527) #13 ADAP2 (ENSBBBG00000016491) #14 RNF135 (ENSBBBG00000008504) #15 RHOT1 (ENSBBBG00000004063) #16 RHBDL3 (ENSBBBG00000016033) #17 C17orf75 (ENSBBBG00000016016) #18 ZNF207 (ENSBBBG00000003982) #19 PSMD11 (ENSBBBG00000015842) #21 CDK5R1 (ENSBBBG00000015765) #22 MYO1D (ENSBBBG00000015737) #23 TMEM98 (ENSBBBG00000015612) #24 SPACA3 (ENSBBBG00000003890) #25 ASIC2 (ENSBBBG00000000789) #26 CCL2 (ENSBBBG00000015537) #27 CCL11 (ENSBBBG00000015529) ##30 ENSBBBG00000015515 #28 TMEM132E (ENSBBBG00000003856) #31 CCT6B (ENSBBBG00000015432) #32 ZNF830 (ENSBBBG00000003814) LIG3 (ENSBBBG00000003485) #33 RFFL (ENSBBBG00000001330) #34 RAD51D (ENSBBBG00000015308) #35 FNDC8 (ENSBBBG00000015233) #36 NLE1 (ENSBBBG00000003521) #37 Bos ANCESTRAL SPECIES 1 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 ENSGT00390000006458 #36 Bos_a ANCESTRAL SPECIES ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 ENSGT00390000006458 #36 Domestic yak MODERN SPECIES 10 RAB11FIP4 (ENSBGRG00000015654) #7 UTP6 (ENSBGRG00000016004) #9 SUZ12 (ENSBGRG00000016989) #10 CRLF3 (ENSBGRG00000017273) #11 ENSBGRG00000017421 ATAD5 (ENSBGRG00000017486) #12 TEFM (ENSBGRG00000018181) #13 ADAP2 (ENSBGRG00000018321) #14 RNF135 (ENSBGRG00000018378) #15 RHOT1 (ENSBGRG00000018417) #16 RHBDL3 (ENSBGRG00000018758) #17 C17orf75 (ENSBGRG00000018880) #18 ZNF207 (ENSBGRG00000018994) #19 ENSBGRG00000019374 PSMD11 (ENSBGRG00000019390) #21 CDK5R1 (ENSBGRG00000019524) #22 MYO1D (ENSBGRG00000019568) #23 TMEM98 (ENSBGRG00000019780) #24 ENSBGRG00000019895 #25 ASIC2 (ENSBGRG00000019964) #26 ENSBGRG00000020251 #27 CCL11 (ENSBGRG00000020299) ##30 ENSBGRG00000020373 #28 ENSBGRG00000020420 TMEM132E (ENSBGRG00000020451) #31 CCT6B (ENSBGRG00000020692) #32 ZNF830 (ENSBGRG00000021136) LIG3 (ENSBGRG00000021180) #33 RFFL (ENSBGRG00000021399) #34 ENSBGRG00000021490 #35 FNDC8 (ENSBGRG00000021652) #36 Wild yak MODERN SPECIES 829 NF1 (ENSBMUG00000011111) RAB11FIP4 (ENSBMUG00000010684) #7 COPRS (ENSBMUG00000010623) #8 UTP6 (ENSBMUG00000010588) #9 SUZ12 (ENSBMUG00000010551) #10 ENSBMUG00000010522 #11 ATAD5 (ENSBMUG00000010450) #12 TEFM (ENSBMUG00000010384) #13 ADAP2 (ENSBMUG00000010349) #14 ENSBMUG00000010324 #15 RHOT1 (ENSBMUG00000010283) #16 RHBDL3 (ENSBMUG00000010162) #17 ENSBMUG00000010140 #18 ZNF207 (ENSBMUG00000010122) #19 PSMD11 (ENSBMUG00000010031) #21 CDK5R1 (ENSBMUG00000010012) #22 MYO1D (ENSBMUG00000009987) #23 TMEM98 (ENSBMUG00000009909) #24 SPACA3 (ENSBMUG00000009900) #25 ASIC2 (ENSBMUG00000009872) #26 Bos_b ANCESTRAL SPECIES 38 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493.i #9 ENSGT00390000012364 #10 ENSGT00390000010799.u.a.j ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095.c.a #35 ENSGT00390000006458 #36 Cow MODERN SPECIES 10 COPRS (ENSBTAG00000049483) #8 UTP6 (ENSBTAG00000015612) #9 SUZ12 (ENSBTAG00000018752) #10 ENSBTAG00000025202 CRLF3 (ENSBTAG00000018381) #11 ATAD5 (ENSBTAG00000018383) #12 ENSBTAG00000051813 TEFM (ENSBTAG00000018386) #13 ADAP2 (ENSBTAG00000003334) #14 RNF135 (ENSBTAG00000017225) #15 RHOT1 (ENSBTAG00000010001) #16 RHBDL3 (ENSBTAG00000020992) #17 C19H17orf75 (ENSBTAG00000020994) #18 ZNF207 (ENSBTAG00000008883) #19 PSMD11 (ENSBTAG00000018897) #21 CDK5R1 (ENSBTAG00000004475) #22 MYO1D (ENSBTAG00000015527) #23 TMEM98 (ENSBTAG00000008913) #24 SPACA3 (ENSBTAG00000000344) #25 ASIC2 (ENSBTAG00000025200) #26 CCL2 (ENSBTAG00000037811) #27 CCL11 (ENSBTAG00000004129) ##30 CCL8 (ENSBTAG00000014113) #28 CCL1 (ENSBTAG00000008832) TMEM132E (ENSBTAG00000002680) #31 CCT6B (ENSBTAG00000020338) #32 ZNF830 (ENSBTAG00000020340) LIG3 (ENSBTAG00000018689) #33 RFFL (ENSBTAG00000013645) #34 RAD51D (ENSBTAG00000019082) #35 FNDC8 (ENSBTAG00000019092) #36 Hybrid Bos Indicus MODERN SPECIES 10 NF1 (ENSBIXG00005018607) RAB11FIP4 (ENSBIXG00005018731) #7 COPRS (ENSBIXG00005018823) #8 UTP6 (ENSBIXG00005018868) #9 SUZ12 (ENSBIXG00005000054) #10 CRLF3 (ENSBIXG00005003096) #11 ATAD5 (ENSBIXG00005002643) #12 TEFM (ENSBIXG00005019077) #13 ADAP2 (ENSBIXG00005006808) #14 RNF135 (ENSBIXG00005019124) #15 RHOT1 (ENSBIXG00005019289) #16 C17orf75 (ENSBIXG00005006030) #18 ZNF207 (ENSBIXG00005019493) #19 ENSBIXG00005019526 PSMD11 (ENSBIXG00005019559) #21 CDK5R1 (ENSBIXG00005019571) #22 MYO1D (ENSBIXG00005019665) #23 TMEM98 (ENSBIXG00005019737) #24 ENSBIXG00005019792 #25 ASIC2 (ENSBIXG00005006881) #26 CCL2 (ENSBIXG00005006654) #27 CCL11 (ENSBIXG00005003267) ##30 ENSBIXG00005019984 #28 ENSBIXG00005003275 TMEM132E (ENSBIXG00005003295) #31 CCT6B (ENSBIXG00005020356) #32 ZNF830 (ENSBIXG00005000019) LIG3 (ENSBIXG00005020425) #33 RFFL (ENSBIXG00005020511) #34 RAD51D (ENSBIXG00005007727) #35 FNDC8 (ENSBIXG00005020624) #36 Cetacea ANCESTRAL SPECIES 5 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Blue whale MODERN SPECIES 12 EVI2A (ENSBMSG00010017340) NF1 (ENSBMSG00010016830) RAB11FIP4 (ENSBMSG00010016704) #7 COPRS (ENSBMSG00010016604) #8 UTP6 (ENSBMSG00010016566) #9 SUZ12 (ENSBMSG00010016507) #10 CRLF3 (ENSBMSG00010016451) #11 ATAD5 (ENSBMSG00010016293) #12 TEFM (ENSBMSG00010016257) #13 ADAP2 (ENSBMSG00010016222) #14 RHOT1 (ENSBMSG00010016141) #16 RHBDL3 (ENSBMSG00010016026) #17 C17orf75 (ENSBMSG00010015998) #18 ZNF207 (ENSBMSG00010015813) #19 PSMD11 (ENSBMSG00010015716) #21 CDK5R1 (ENSBMSG00010015699) #22 MYO1D (ENSBMSG00010015533) #23 TMEM98 (ENSBMSG00010015458) #24 SPACA3 (ENSBMSG00010015398) #25 ASIC2 (ENSBMSG00010015290) #26 CCL2 (ENSBMSG00010015239) #27 CCL7 (ENSBMSG00010015213) ##30 CCL11 (ENSBMSG00010015194) ##30 CCL8 (ENSBMSG00010015171) #28 CCL1 (ENSBMSG00010015132) #30 TMEM132E (ENSBMSG00010015019) #31 ENSBMSG00010014985 ZNF830 (ENSBMSG00010014976) LIG3 (ENSBMSG00010014942) #33 RFFL (ENSBMSG00010014852) #34 RAD51D (ENSBMSG00010014782) #35 Odontoceti ANCESTRAL SPECIES 17 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Sperm whale MODERN SPECIES 5 OMG (ENSPCTG00005011629) EVI2B (ENSPCTG00005011656) EVI2A (ENSPCTG00005011675) COPRS (ENSPCTG00005011708) #8 UTP6 (ENSPCTG00005011804) #9 SUZ12 (ENSPCTG00005011878) #10 ENSPCTG00005011995 #11 ENSPCTG00005012096 ATAD5 (ENSPCTG00005012141) #12 TEFM (ENSPCTG00005012188) #13 RHOT1 (ENSPCTG00005008991) #16 RHBDL3 (ENSPCTG00005011112) #17 C14H17orf75 (ENSPCTG00005011314) #18 ZNF207 (ENSPCTG00005011440) PSMD11 (ENSPCTG00005011616) #21 CDK5R1 (ENSPCTG00005011765) #22 MYO1D (ENSPCTG00005011821) #23 TMEM98 (ENSPCTG00005012148) #24 SPACA3 (ENSPCTG00005012213) #25 ASIC2 (ENSPCTG00005012341) #26 CCL2 (ENSPCTG00005012569) #27 CCL11 (ENSPCTG00005012625) ##30 ENSPCTG00005012666 CCL13 (ENSPCTG00005012690) #29 CCL1 (ENSPCTG00005012728) TMEM132E (ENSPCTG00005012754) #31 ENSPCTG00005012970 ENSPCTG00005013032 ENSPCTG00005013042 #32 LIG3 (ENSPCTG00005013330) #33 RFFL (ENSPCTG00005013449) #34 Odontoceti_a ANCESTRAL SPECIES 18 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00490000044407 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Odontoceti_b ANCESTRAL SPECIES 20 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT01010000228931 ENSGT00390000012151 ENSGT00940000156492 #33 Monodontidae ANCESTRAL SPECIES 21 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT01010000228931 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Narwhal MODERN SPECIES 316 EVI2A (ENSMMNG00015020315) RAB11FIP4 (ENSMMNG00015020333) #7 COPRS (ENSMMNG00015020405) #8 UTP6 (ENSMMNG00015020445) #9 SUZ12 (ENSMMNG00015020516) #10 CRLF3 (ENSMMNG00015020564) #11 ATAD5 (ENSMMNG00015020618) #12 ENSMMNG00015020651 TEFM (ENSMMNG00015020658) #13 ADAP2 (ENSMMNG00015020674) #14 RHOT1 (ENSMMNG00015020743) #16 RHBDL3 (ENSMMNG00015020871) #17 C17orf75 (ENSMMNG00015020915) #18 ZNF207 (ENSMMNG00015021000) #19 PSMD11 (ENSMMNG00015021150) #21 CDK5R1 (ENSMMNG00015021171) #22 MYO1D (ENSMMNG00015021191) #23 TMEM98 (ENSMMNG00015021221) #24 SPACA3 (ENSMMNG00015021243) #25 ASIC2 (ENSMMNG00015021265) #26 CCL2 (ENSMMNG00015021287) #27 ENSMMNG00015021298 CCL11 (ENSMMNG00015021303) ##30 CCL8 (ENSMMNG00015021312) #28 ENSMMNG00015021318 #29 CCL1 (ENSMMNG00015021332) #30 TMEM132E (ENSMMNG00015021348) #31 ENSMMNG00015021366 ENSMMNG00015015650 ZNF830 (ENSMMNG00015015663) LIG3 (ENSMMNG00015015691) #33 Beluga whale MODERN SPECIES 43 RAB11FIP4 (ENSDLEG00000004705) #7 ENSDLEG00000004673 #8 UTP6 (ENSDLEG00000004635) #9 SUZ12 (ENSDLEG00000004558) #10 ENSDLEG00000004529 CRLF3 (ENSDLEG00000004508) #11 ENSDLEG00000004497 ATAD5 (ENSDLEG00000004353) #12 TEFM (ENSDLEG00000004305) #13 ADAP2 (ENSDLEG00000020513) #14 RHOT1 (ENSDLEG00000019806) #16 RHBDL3 (ENSDLEG00000019728) #17 C17orf75 (ENSDLEG00000019724) #18 ZNF207 (ENSDLEG00000019706) #19 PSMD11 (ENSDLEG00000019694) #21 CDK5R1 (ENSDLEG00000019689) #22 MYO1D (ENSDLEG00000019656) #23 TMEM98 (ENSDLEG00000019652) #24 SPACA3 (ENSDLEG00000019645) #25 ASIC2 (ENSDLEG00000019639) #26 ENSDLEG00000019633 ##26 CCL2 (ENSDLEG00000019628) #27 CCL11 (ENSDLEG00000019618) ##30 ENSDLEG00000019603 #28 ENSDLEG00000019587 ENSDLEG00000019583 SPEM2 (ENSDLEG00000019571) ENSDLEG00000019561 ENSDLEG00000019553 ENSDLEG00000019548 Laurasiatheria_b ANCESTRAL SPECIES 4 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Carnivora ANCESTRAL SPECIES 9 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Caniformia ANCESTRAL SPECIES 6 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Caniformia_b ANCESTRAL SPECIES 21 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 Ursidae ANCESTRAL SPECIES 18 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Ursus ANCESTRAL SPECIES 8 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000153112.E.f.b.c.b ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 American black bear MODERN SPECIES 134 PSMD11 (ENSUAMG00000002168) #21 CDK5R1 (ENSUAMG00000002161) #22 MYO1D (ENSUAMG00000002155) #23 ENSUAMG00000002151 TMEM98 (ENSUAMG00000002145) #24 ENSUAMG00000002139 #25 ASIC2 (ENSUAMG00000002120) #26 Polar bear MODERN SPECIES 192 EVI2A (ENSUMAG00000015109) RAB11FIP4 (ENSUMAG00000015115) #7 COPRS (ENSUMAG00000015132) #8 UTP6 (ENSUMAG00000015139) #9 SUZ12 (ENSUMAG00000015161) #10 CRLF3 (ENSUMAG00000015224) #11 ATAD5 (ENSUMAG00000015244) #12 TEFM (ENSUMAG00000015276) #13 ADAP2 (ENSUMAG00000015291) #14 ENSUMAG00000015298 #15 RHOT1 (ENSUMAG00000015308) #16 RHBDL3 (ENSUMAG00000015318) #17 C17orf75 (ENSUMAG00000015332) #18 ZNF207 (ENSUMAG00000015371) #19 PSMD11 (ENSUMAG00000015400) #21 CDK5R1 (ENSUMAG00000015534) #22 MYO1D (ENSUMAG00000015550) #23 ENSUMAG00000015571 TMEM98 (ENSUMAG00000015573) #24 ENSUMAG00000015581 #25 ASIC2 (ENSUMAG00000015591) #26 ENSUMAG00000015601 ##26 CCL2 (ENSUMAG00000015604) #27 CCL7 (ENSUMAG00000015608) ##30 CCL8 (ENSUMAG00000015612) #28 CCL13 (ENSUMAG00000015615) #29 ENSUMAG00000015623 CCT6B (ENSUMAG00000015641) #32 ZNF830 (ENSUMAG00000015731) LIG3 (ENSUMAG00000015895) #33 RFFL (ENSUMAG00000016713) #34 Giant Panda MODERN SPECIES 4 EVI2B (ENSAMEG00000019814) EVI2A (ENSAMEG00000005406) RAB11FIP4 (ENSAMEG00000005409) #7 COPRS (ENSAMEG00000005439) #8 UTP6 (ENSAMEG00000005443) #9 ENSAMEG00000005490 #10 ENSAMEG00000005514 #11 ENSAMEG00000005534 #12 TEFM (ENSAMEG00000005559) #13 ENSAMEG00000005566 #14 ENSAMEG00000005578 #16 ENSAMEG00000005643 #17 C17orf75 (ENSAMEG00000005662) #18 ZNF207 (ENSAMEG00000005671) #19 PSMD11 (ENSAMEG00000005693) #21 CDK5R1 (ENSAMEG00000019817) #22 MYO1D (ENSAMEG00000005735) #23 TMEM98 (ENSAMEG00000026035) #24 SPACA3 (ENSAMEG00000005761) #25 ASIC2 (ENSAMEG00000005774) #26 ENSAMEG00000025929 #27 CCL7 (ENSAMEG00000028962) ##30 CCL8 (ENSAMEG00000029965) #28 CCL13 (ENSAMEG00000023685) #29 CCL1 (ENSAMEG00000005795) #30 TMEM132E (ENSAMEG00000014409) #31 CCT6B (ENSAMEG00000014473) #32 ZNF830 (ENSAMEG00000019495) LIG3 (ENSAMEG00000014509) #33 RFFL (ENSAMEG00000014564) #34 RAD51D (ENSAMEG00000014577) #35 Mustelinae ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492.c #33 Ferret MODERN SPECIES 181 ENSMPUG00000014576 COPRS (ENSMPUG00000014579) #8 UTP6 (ENSMPUG00000014581) #9 ENSMPUG00000014639 SUZ12 (ENSMPUG00000014641) #10 CRLF3 (ENSMPUG00000014670) #11 ATAD5 (ENSMPUG00000014687) #12 TEFM (ENSMPUG00000014690) #13 ADAP2 (ENSMPUG00000014694) #14 RNF135 (ENSMPUG00000014696) #15 RHOT1 (ENSMPUG00000014703) #16 RHBDL3 (ENSMPUG00000014711) #17 C17orf75 (ENSMPUG00000014757) #18 ZNF207 (ENSMPUG00000014761) #19 PSMD11 (ENSMPUG00000014767) #21 CDK5R1 (ENSMPUG00000019514) #22 MYO1D (ENSMPUG00000014772) #23 ENSMPUG00000014779 TMEM98 (ENSMPUG00000014780) #24 SPACA3 (ENSMPUG00000014796) #25 ASIC2 (ENSMPUG00000014834) #26 ENSMPUG00000014838 ENSMPUG00000014840 CCL2 (ENSMPUG00000014841) #27 CCL7 (ENSMPUG00000014843) ##30 CCL8 (ENSMPUG00000014845) #28 CCL13 (ENSMPUG00000014846) #29 ENSMPUG00000014849 TMEM132E (ENSMPUG00000014852) #31 ENSMPUG00000014853 CCT6B (ENSMPUG00000014856) #32 American mink MODERN SPECIES 37 EVI2A (ENSNVIG00000018714) ENSNVIG00000018723 #7 COPRS (ENSNVIG00000018741) #8 UTP6 (ENSNVIG00000018745) #9 SUZ12 (ENSNVIG00000018784) #10 CRLF3 (ENSNVIG00000018811) #11 ATAD5 (ENSNVIG00000018837) #12 ENSNVIG00000018890 #13 ADAP2 (ENSNVIG00000018896) #14 ENSNVIG00000018939 #15 RHOT1 (ENSNVIG00000018960) #16 RHBDL3 (ENSNVIG00000019290) #17 NJMU (ENSNVIG00000019347) #18 ZNF207 (ENSNVIG00000019388) #19 PSMD11 (ENSNVIG00000019522) #21 CD5R1 (ENSNVIG00000019539) #22 MYO1D (ENSNVIG00000019549) #23 TMM98 (ENSNVIG00000019571) #24 SPACA3 (ENSNVIG00000019598) #25 ASIC2 (ENSNVIG00000019610) #26 CCL2 (ENSNVIG00000019643) #27 ENSNVIG00000019653 CCL8 (ENSNVIG00000019665) #28 CCL13 (ENSNVIG00000019676) #29 CCL1 (ENSNVIG00000019684) #30 TMEM132E (ENSNVIG00000019694) #31 CCT6B (ENSNVIG00000019712) #32 ZNF830 (ENSNVIG00000019817) LIG3 (ENSNVIG00000019831) #33 RFFL (ENSNVIG00000019960) #34 RAD51D (ENSNVIG00000020004) #35 Canidae ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449.a #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Canis_lupus ANCESTRAL SPECIES 3 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449.a #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01100000263482.F #30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Dog MODERN SPECIES 37 RAB11FIP4 (ENSCAFG00845014090) #7 COPRS (ENSCAFG00845014015) #8 UTP6 (ENSCAFG00845013931) #9 SUZ12 (ENSCAFG00845013827) #10 ENSCAFG00845013766 #11 ATAD5 (ENSCAFG00845013608) #12 TEFM (ENSCAFG00845013524) #13 ADAP2 (ENSCAFG00845013471) #14 RNF135 (ENSCAFG00845013351) #15 ENSCAFG00845013335 RHOT1 (ENSCAFG00845012939) #16 RHBDL3 (ENSCAFG00845012661) #17 C17orf75 (ENSCAFG00845012586) #18 ZNF207 (ENSCAFG00845012267) #19 PSMD11 (ENSCAFG00845012106) #21 CDK5R1 (ENSCAFG00845012076) #22 MYO1D (ENSCAFG00845011784) #23 TMEM98 (ENSCAFG00845011666) #24 SPACA3 (ENSCAFG00845011594) #25 ASIC2 (ENSCAFG00845011475) #26 CCL2 (ENSCAFG00845011375) #27 CCL8 (ENSCAFG00845011338) #28 CCL1 (ENSCAFG00845011240) CCL13 (ENSCAFG00845011162) #29 TMEM132E (ENSCAFG00845011068) #31 ENSCAFG00845011012 CCT6B (ENSCAFG00845010909) #32 ZNF830 (ENSCAFG00845010855) LIG3 (ENSCAFG00845010737) #33 RFFL (ENSCAFG00845010579) #35 FNDC8 (ENSCAFG00845010495) #36 Dingo MODERN SPECIES 150 ENSCAFG00020014255 #18 ENSCAFG00020014254 #18 ENSCAFG00020014249 #19 PSMD11 (ENSCAFG00020014246) #21 CDK5R1 (ENSCAFG00020014244) #22 MYO1D (ENSCAFG00020014232) #23 TMEM98 (ENSCAFG00020014224) #24 ENSCAFG00020014220 #25 ASIC2 (ENSCAFG00020014212) #26 ENSCAFG00020014208 ENSCAFG00020014206 #27 CCL7 (ENSCAFG00020014205) ##30 CCL8 (ENSCAFG00020014202) #28 CCL13 (ENSCAFG00020014200) #29 ENSCAFG00020014197 #30 TMEM132E (ENSCAFG00020014170) #31 ENSCAFG00020014164 ENSCAFG00020014162 CCT6B (ENSCAFG00020014065) #32 ZNF830 (ENSCAFG00020014057) Red fox MODERN SPECIES 20 F8 (ENSVVUG00000020717) FUNDC2 (ENSVVUG00000020713) CMC4 (ENSVVUG00000020710) MTCP1 (ENSVVUG00000020711) ENSVVUG00000020709 ENSVVUG00000020707 ENSVVUG00000020703 ADAP2 (ENSVVUG00000020701) #14 RNF135 (ENSVVUG00000020698) #15 ENSVVUG00000020695 RHOT1 (ENSVVUG00000020640) #16 RHBDL3 (ENSVVUG00000020629) #17 CUNH17orf75 (ENSVVUG00000020625) #18 ZNF207 (ENSVVUG00000020618) #19 PSMD11 (ENSVVUG00000020613) #21 CDK5R1 (ENSVVUG00000020611) #22 MYO1D (ENSVVUG00000020589) #23 TMEM98 (ENSVVUG00000020587) #24 SPACA3 (ENSVVUG00000020586) #25 ASIC2 (ENSVVUG00000020562) #26 ENSVVUG00000020545 ##26 CCL2 (ENSVVUG00000020543) #27 CCL8 (ENSVVUG00000020542) #28 ENSVVUG00000020541 #29 CCL1 (ENSVVUG00000020540) #30 TMEM132E (ENSVVUG00000020524) #31 CCT6B (ENSVVUG00000020499) #32 ZNF830 (ENSVVUG00000020495) LIG3 (ENSVVUG00000020483) #33 RFFL (ENSVVUG00000020476) #34 RAD51D (ENSVVUG00000020463) #35 Felidae ANCESTRAL SPECIES 8 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479.i #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Panthera ANCESTRAL SPECIES 14 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479.i #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Tiger MODERN SPECIES 76 NF1 (ENSPTIG00000019194) RAB11FIP4 (ENSPTIG00000016907) #7 COPRS (ENSPTIG00000016317) #8 UTP6 (ENSPTIG00000013913) #9 SUZ12 (ENSPTIG00000010329) #10 CRLF3 (ENSPTIG00000009626) #11 ATAD5 (ENSPTIG00000006424) #12 TEFM (ENSPTIG00000004505) #13 ADAP2 (ENSPTIG00000021798) #14 ENSPTIG00000021371 #15 RHOT1 (ENSPTIG00000010535) #16 RHBDL3 (ENSPTIG00000006273) #17 C17orf75 (ENSPTIG00000001419) #18 ZNF207 (ENSPTIG00000016631) #19 PSMD11 (ENSPTIG00000014305) #21 CDK5R1 (ENSPTIG00000000341) #22 MYO1D (ENSPTIG00000007889) #23 TMEM98 (ENSPTIG00000004532) #24 SPACA3 (ENSPTIG00000000021) #25 ASIC2 (ENSPTIG00000021857) #26 Panthera_a ANCESTRAL SPECIES 13 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01060000248892 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01040000242096 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479.i #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 leopard MODERN SPECIES 96 RAB11FIP4 (ENSPPRG00000003276) #7 COPRS (ENSPPRG00000001459) #8 UTP6 (ENSPPRG00000001010) #9 SUZ12 (ENSPPRG00000021306) #10 CRLF3 (ENSPPRG00000020201) #11 ATAD5 (ENSPPRG00000018417) #12 TEFM (ENSPPRG00000015099) #13 ADAP2 (ENSPPRG00000014777) #14 ENSPPRG00000011923 RNF135 (ENSPPRG00000011481) #15 RHOT1 (ENSPPRG00000010338) #16 RHBDL3 (ENSPPRG00000006776) #17 C17orf75 (ENSPPRG00000002407) #18 ZNF207 (ENSPPRG00000001689) #19 PSMD11 (ENSPPRG00000023389) #21 CDK5R1 (ENSPPRG00000017589) #22 MYO1D (ENSPPRG00000024181) #23 TMEM98 (ENSPPRG00000014217) #24 SPACA3 (ENSPPRG00000013306) #25 ASIC2 (ENSPPRG00000011981) #26 ENSPPRG00000009983 ENSPPRG00000009828 CCL8 (ENSPPRG00000009741) #28 CCL13 (ENSPPRG00000009433) #29 ENSPPRG00000008979 TMEM132E (ENSPPRG00000008656) #31 CCT6B (ENSPPRG00000007926) #32 ZNF830 (ENSPPRG00000017044) LIG3 (ENSPPRG00000005157) #33 RFFL (ENSPPRG00000003045) #34 RAD51D (ENSPPRG00000001417) #35 lion MODERN SPECIES 14 RAB11FIP4 (ENSPLOG00000013242) #7 COPRS (ENSPLOG00000013486) #8 UTP6 (ENSPLOG00000013575) #9 SUZ12 (ENSPLOG00000013650) #10 CRLF3 (ENSPLOG00000013965) #11 ATAD5 (ENSPLOG00000014072) #12 TEFM (ENSPLOG00000014129) #13 ADAP2 (ENSPLOG00000014207) #14 ENSPLOG00000014267 #15 RHOT1 (ENSPLOG00000014449) #16 RHBDL3 (ENSPLOG00000014660) #17 C17orf75 (ENSPLOG00000014757) #18 ZNF207 (ENSPLOG00000014967) #19 ENSPLOG00000015470 PSMD11 (ENSPLOG00000015536) #21 CDK5R1 (ENSPLOG00000015588) #22 MYO1D (ENSPLOG00000015637) #23 TMEM98 (ENSPLOG00000015789) #24 SPACA3 (ENSPLOG00000015896) #25 ASIC2 (ENSPLOG00000015956) #26 ENSPLOG00000016136 CCL2 (ENSPLOG00000016154) #27 ENSPLOG00000016184 CCL8 (ENSPLOG00000008313) #28 CCL13 (ENSPLOG00000008357) #29 ENSPLOG00000008391 TMEM132E (ENSPLOG00000008445) #31 CCT6B (ENSPLOG00000008659) #32 ZNF830 (ENSPLOG00000009023) LIG3 (ENSPLOG00000009223) #33 RFFL (ENSPLOG00000009495) #34 Cat MODERN SPECIES 245 RAB11FIP4 (ENSFCAG00000006068) #7 COPRS (ENSFCAG00000015794) #8 UTP6 (ENSFCAG00000015795) #9 SUZ12 (ENSFCAG00000023797) #10 CRLF3 (ENSFCAG00000025986) #11 ATAD5 (ENSFCAG00000006895) #12 TEFM (ENSFCAG00000022086) #13 ADAP2 (ENSFCAG00000012459) #14 ENSFCAG00000009132 #15 RHOT1 (ENSFCAG00000015378) #16 RHBDL3 (ENSFCAG00000015381) #17 CE1H17orf75 (ENSFCAG00000025653) #18 ZNF207 (ENSFCAG00000015387) #19 ENSFCAG00000028860 PSMD11 (ENSFCAG00000002060) #21 CDK5R1 (ENSFCAG00000008545) #22 MYO1D (ENSFCAG00000012420) #23 TMEM98 (ENSFCAG00000000912) #24 SPACA3 (ENSFCAG00000000913) #25 ASIC2 (ENSFCAG00000018329) #26 CCL2 (ENSFCAG00000038488) #27 CCL7 (ENSFCAG00000045217) ##30 CCL8 (ENSFCAG00000013594) #28 CCL13 (ENSFCAG00000026454) #29 ENSFCAG00000032743 TMEM132E (ENSFCAG00000022991) #31 CCT6B (ENSFCAG00000022789) #32 LIG3 (ENSFCAG00000000249) #33 RFFL (ENSFCAG00000000250) #34 RAD51D (ENSFCAG00000027426) #35 FNDC8 (ENSFCAG00000000252) #36 Laurasiatheria_c ANCESTRAL SPECIES 3 ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00390000003008 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b Chiroptera ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b Microchiroptera ANCESTRAL SPECIES ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 ENSGT00410000025651.A.b.a.a.a.b Microbat MODERN SPECIES 1224 CA10 (ENSMLUG00000016229) ENSMLUG00000028702 RHOT1 (ENSMLUG00000012605) #16 RHBDL3 (ENSMLUG00000007115) #17 C17orf75 (ENSMLUG00000007126) #18 ENSMLUG00000016085 #19 PSMD11 (ENSMLUG00000003874) #21 CDK5R1 (ENSMLUG00000025930) #22 MYO1D (ENSMLUG00000003887) #23 ENSMLUG00000001191 #24 SPACA3 (ENSMLUG00000001197) #25 ASIC2 (ENSMLUG00000001207) #26 Greater horseshoe bat MODERN SPECIES 13 COPRS (ENSRFEG00010017903) #8 UTP6 (ENSRFEG00010017972) #9 SUZ12 (ENSRFEG00010018041) #10 CRLF3 (ENSRFEG00010018133) #11 ATAD5 (ENSRFEG00010018233) #12 TEFM (ENSRFEG00010018619) #13 ADAP2 (ENSRFEG00010018637) #14 RNF135 (ENSRFEG00010018686) #15 RHOT1 (ENSRFEG00010018815) #16 RHBDL3 (ENSRFEG00010019014) #17 C17orf75 (ENSRFEG00010019104) #18 ENSRFEG00010019127 ZNF207 (ENSRFEG00010019158) #19 ENSRFEG00010019307 PSMD11 (ENSRFEG00010019338) #21 CDK5R1 (ENSRFEG00010019423) #22 MYO1D (ENSRFEG00010019451) #23 ENSRFEG00010019534 TMEM98 (ENSRFEG00010019564) #24 SPACA3 (ENSRFEG00010019589) #25 ASIC2 (ENSRFEG00010019642) #26 ENSRFEG00010019773 CCL2 (ENSRFEG00010019809) #27 CCL8 (ENSRFEG00010019872) #28 TMEM132E (ENSRFEG00010019902) #31 CCT6B (ENSRFEG00010020082) #32 ZNF830 (ENSRFEG00010020329) LIG3 (ENSRFEG00010020352) #33 RFFL (ENSRFEG00010020407) #34 RAD51D (ENSRFEG00010020450) #35 FNDC8 (ENSRFEG00010020501) #36 Equus ANCESTRAL SPECIES ENSGT00390000009142 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.a.b #28 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 Donkey MODERN SPECIES 4 EVI2A (ENSEASG00005010859) RAB11FIP4 (ENSEASG00005010862) #7 UTP6 (ENSEASG00005010870) #9 ENSEASG00005010872 #10 ENSEASG00005010875 #11 ENSEASG00005010880 #12 TEFM (ENSEASG00005010887) #13 ADAP2 (ENSEASG00005010891) #14 ENSEASG00005029034 ENSEASG00005033664 #15 ENSEASG00005010897 #16 ENSEASG00005010901 #17 C17orf75 (ENSEASG00005010904) #18 ZNF207 (ENSEASG00005010907) #19 PSMD11 (ENSEASG00005010909) #21 CDK5R1 (ENSEASG00005010912) #22 MYO1D (ENSEASG00005010913) #23 TMEM98 (ENSEASG00005010917) #24 SPACA3 (ENSEASG00005010921) #25 ASIC2 (ENSEASG00005010930) #26 ENSEASG00005001865 ENSEASG00005035074 CCL2 (ENSEASG00005026206) #27 CCL7 (ENSEASG00005028946) ##30 CCL11 (ENSEASG00005029284) ##30 CCL8 (ENSEASG00005028357) #28 ENSEASG00005033288 #29 ENSEASG00005036948 TMEM132E (ENSEASG00005010955) #31 CCT6B (ENSEASG00005010982) #32 ZNF830 (ENSEASG00005011187) Horse MODERN SPECIES 2 EVI2B (ENSECAG00000004162) EVI2A (ENSECAG00000004031) NF1 (ENSECAG00000008317) RAB11FIP4 (ENSECAG00000006337) #7 UTP6 (ENSECAG00000022217) #9 SUZ12 (ENSECAG00000019997) #10 CRLF3 (ENSECAG00000019822) #11 ATAD5 (ENSECAG00000018443) #12 TEFM (ENSECAG00000058199) #13 ADAP2 (ENSECAG00000015333) #14 RNF135 (ENSECAG00000014806) #15 RHOT1 (ENSECAG00000009478) #16 C11H17orf75 (ENSECAG00000001756) #18 ZNF207 (ENSECAG00000017464) #19 PSMD11 (ENSECAG00000014306) #21 CDK5R1 (ENSECAG00000004006) #22 MYO1D (ENSECAG00000009709) #23 TMEM98 (ENSECAG00000007610) #24 SPACA3 (ENSECAG00000005842) #25 ASIC2 (ENSECAG00000000922) #26 CCL8 (ENSECAG00000034282) #29 ENSECAG00000036873 TMEM132E (ENSECAG00000023816) #31 ZNF830 (ENSECAG00000003872) CCT6B (ENSECAG00000021342) #32 LIG3 (ENSECAG00000016416) #33 RFFL (ENSECAG00000015502) #34 RAD51D (ENSECAG00000014139) #35 FNDC8 (ENSECAG00000014023) #36 NLE1 (ENSECAG00000011072) #37 UNC45B (ENSECAG00000001034) Atlantogenata ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.d.a.a.a.b #27 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01100000263482.A.a.a.d.a.a.b ##30 ENSGT01100000263482.A.a.a.d.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 Afrotheria ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 Afrotheria_a ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 ENSGT01100000263482.A.a.a.d.a.a.a.a ##30 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339 #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 ENSGT00940000157654 Elephant MODERN SPECIES 310 EVI2A (ENSLAFG00000000268) RAB11FIP4 (ENSLAFG00000027367) #7 COPRS (ENSLAFG00000029887) #8 UTP6 (ENSLAFG00000013008) #9 SUZ12 (ENSLAFG00000003833) #10 CRLF3 (ENSLAFG00000008331) #11 ATAD5 (ENSLAFG00000016351) #12 TEFM (ENSLAFG00000022039) #13 ADAP2 (ENSLAFG00000004931) #14 RNF135 (ENSLAFG00000004933) #15 RHOT1 (ENSLAFG00000017808) #16 RHBDL3 (ENSLAFG00000005280) #17 C17orf75 (ENSLAFG00000005282) #18 ZNF207 (ENSLAFG00000004317) #19 PSMD11 (ENSLAFG00000003739) #21 CDK5R1 (ENSLAFG00000026055) #22 MYO1D (ENSLAFG00000004973) #23 TMEM98 (ENSLAFG00000011131) #24 SPACA3 (ENSLAFG00000028131) #25 ASIC2 (ENSLAFG00000022330) #26 ENSLAFG00000004719 ##30 CCL8 (ENSLAFG00000013122) #28 ENSLAFG00000002372 TMEM132E (ENSLAFG00000006799) #31 CCT6B (ENSLAFG00000018317) #32 ZNF830 (ENSLAFG00000030751) LIG3 (ENSLAFG00000001574) #33 RFFL (ENSLAFG00000018323) #34 RAD51D (ENSLAFG00000018328) #35 FNDC8 (ENSLAFG00000018333) #36 NLE1 (ENSLAFG00000018338) #37 Hyrax MODERN SPECIES 840 PSMD11 (ENSPCAG00000006858) #21 CDK5R1 (ENSPCAG00000006931) #22 MYO1D (ENSPCAG00000006940) #23 Xenarthra ANCESTRAL SPECIES 176 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00830000128449 #15 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00940000171223 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00740000117022 ENSGT00390000012062 #24 ENSGT00940000161810 #25 ENSGT00940000154991.b #26 Sloth MODERN SPECIES 909 PSMD11 (ENSCHOG00000008562) #21 CDK5R1 (ENSCHOG00000008577) #22 MYO1D (ENSCHOG00000008580) #23 Armadillo MODERN SPECIES 1208 COPRS (ENSDNOG00000049759) #8 UTP6 (ENSDNOG00000037018) #9 SUZ12 (ENSDNOG00000048792) #10 CRLF3 (ENSDNOG00000002817) #11 ATAD5 (ENSDNOG00000043121) #12 TEFM (ENSDNOG00000037500) #13 ADAP2 (ENSDNOG00000004393) #14 RNF135 (ENSDNOG00000036014) #15 ENSDNOG00000024556 RHOT1 (ENSDNOG00000010168) #16 RHBDL3 (ENSDNOG00000010220) #17 C17orf75 (ENSDNOG00000003358) #18 ENSDNOG00000003368 ENSDNOG00000042894 PSMD11 (ENSDNOG00000011264) #21 CDK5R1 (ENSDNOG00000012933) #22 MYO1D (ENSDNOG00000012936) #23 TMEM98 (ENSDNOG00000046654) #24 H2BN1 (ENSDNOG00000043487) SPACA3 (ENSDNOG00000005381) #25 ASIC2 (ENSDNOG00000044027) #26 Marsupialia ANCESTRAL SPECIES 2 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.a.a #29 ENSGT01100000263482.A.a.a.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339.l #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 ENSGT00940000157881 #37 Opossum MODERN SPECIES 1 NF1 (ENSMODG00000019215) RAB11FIP4 (ENSMODG00000019209) #7 ENSMODG00000025696 #8 UTP6 (ENSMODG00000019206) #9 SUZ12 (ENSMODG00000019204) #10 CRLF3 (ENSMODG00000019203) #11 ATAD5 (ENSMODG00000019200) #12 ENSMODG00000019199 #13 ADAP2 (ENSMODG00000019196) #14 ENSMODG00000046147 RHOT1 (ENSMODG00000019189) #16 RHBDL3 (ENSMODG00000019180) #17 C17orf75 (ENSMODG00000019187) #18 ZNF207 (ENSMODG00000019185) #19 PSMD11 (ENSMODG00000019183) #21 CDK5R1 (ENSMODG00000023193) #22 MYO1D (ENSMODG00000019177) #23 TMEM98 (ENSMODG00000049184) #24 ENSMODG00000019169 ENSMODG00000040234 ASIC2 (ENSMODG00000019166) #26 ENSMODG00000019163 ##26 ENSMODG00000019162 #29 ENSMODG00000019159 #29 ENSMODG00000019157 #29 ENSMODG00000019155 #31 ZNF830 (ENSMODG00000019150) CCT6B (ENSMODG00000019152) #32 LIG3 (ENSMODG00000019147) #33 RFFL (ENSMODG00000019143) #34 RAD51D (ENSMODG00000019141) #35 Marsupialia_b ANCESTRAL SPECIES 1 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.a.a #29 ENSGT01100000263482.A.a.a.a.b.b #29 ENSGT01100000263482.A.a.a.a.b.a #29 ENSGT01100000263482.A.a.a.b #29 ENSGT01030000234760 ENSGT00940000158479 #31 ENSGT00940000156339.l #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 Diprotodontia ANCESTRAL SPECIES 5 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.a.a #29 ENSGT01100000263482.A.a.a.a.b.b #29 ENSGT01100000263482.A.a.a.a.b.a #29 ENSGT01100000263482.A.a.a.b #29 ENSGT00940000158479 #31 ENSGT00940000156339.l #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 Diprotodontia_a ANCESTRAL SPECIES 6 ENSGT00390000003004 ENSGT00440000033742.a.b #7 ENSGT00390000007384 #8 ENSGT00390000016493 #9 ENSGT00390000012364 #10 ENSGT00940000153469.a.b #11 ENSGT00940000153469.a.a #12 ENSGT00390000010581 #13 ENSGT00940000156498 #14 ENSGT00940000164538 ENSGT00940000155641 #16 ENSGT00940000158838 #17 ENSGT00390000005481 #18 ENSGT00730000111057 #19 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00390000012062 #24 ENSGT00940000154991.b #26 ENSGT00940000154991.a.b ##26 ENSGT01100000263482.A.a.a.a.a #29 ENSGT01100000263482.A.a.a.a.b.b #29 ENSGT01100000263482.A.a.a.a.b.a #29 ENSGT01100000263482.A.a.a.b #29 ENSGT00940000158479 #31 ENSGT00940000156339.l #32 ENSGT00390000012151 ENSGT00940000156492 #33 ENSGT00390000012719.a #34 ENSGT00940000159095 #35 ENSGT00390000006458 #36 koala MODERN SPECIES 144 NF1 (ENSPCIG00000026862) RAB11FIP4 (ENSPCIG00000022917) #7 ENSPCIG00000029964 #8 UTP6 (ENSPCIG00000029968) #9 SUZ12 (ENSPCIG00000029986) #10 CRLF3 (ENSPCIG00000030058) #11 ATAD5 (ENSPCIG00000030062) #12 TEFM (ENSPCIG00000030066) #13 ADAP2 (ENSPCIG00000030068) #14 ENSPCIG00000030073 RHOT1 (ENSPCIG00000030079) #16 RHBDL3 (ENSPCIG00000030090) #17 C17orf75 (ENSPCIG00000030093) #18 ZNF207 (ENSPCIG00000030098) #19 PSMD11 (ENSPCIG00000030100) #21 CDK5R1 (ENSPCIG00000030101) #22 ENSPCIG00000032294 MYO1D (ENSPCIG00000030103) #23 TMEM98 (ENSPCIG00000032225) #24 ASIC2 (ENSPCIG00000030110) #26 ENSPCIG00000029656 ##26 ENSPCIG00000029662 #29 ENSPCIG00000029663 #29 ENSPCIG00000029664 #29 ENSPCIG00000029665 #29 TMEM132E (ENSPCIG00000027454) #31 Common wonbat MODERN SPECIES 122 CDK5R1 (ENSVURG00010000512) #22 Wallaby MODERN SPECIES 8484 CDK5R1 (ENSMEUG00000016765) #22 ENSMEUG00000016766 #23 Tasmanian devil MODERN SPECIES 3 ENSSHAG00000022202 ENSSHAG00000025266 ENSSHAG00000018926 RAB11FIP4 (ENSSHAG00000018893) #7 UTP6 (ENSSHAG00000026340) #9 ENSSHAG00000018761 #10 ENSSHAG00000018745 #11 ATAD5 (ENSSHAG00000018727) #12 TEFM (ENSSHAG00000018720) #13 ENSSHAG00000018704 #14 ENSSHAG00000018633 #16 RHBDL3 (ENSSHAG00000022769) #17 C17orf75 (ENSSHAG00000029544) #18 ZNF207 (ENSSHAG00000018513) #19 PSMD11 (ENSSHAG00000018453) #21 CDK5R1 (ENSSHAG00000025844) #22 MYO1D (ENSSHAG00000018189) #23 TMEM98 (ENSSHAG00000017941) #24 ASIC2 (ENSSHAG00000017657) #26 ENSSHAG00000014395 ##26 ENSSHAG00000027751 ENSSHAG00000023113 #29 ENSSHAG00000013961 #29 ENSSHAG00000013914 #29 ENSSHAG00000013669 #29 ENSSHAG00000013613 TMEM132E (ENSSHAG00000011259) #31 ZNF830 (ENSSHAG00000030733) CCT6B (ENSSHAG00000022288) #32 LIG3 (ENSSHAG00000006134) #33 RFFL (ENSSHAG00000005858) #34 Platypus MODERN SPECIES 2 TANC2 (ENSOANG00000001877) CYB561 (ENSOANG00000037186) ACE (ENSOANG00000003975) KCNH6 (ENSOANG00000044338) DCAF7 (ENSOANG00000049902) TACO1 (ENSOANG00000040249) MAP3K3 (ENSOANG00000037416) STRADA (ENSOANG00000044390) CCDC47 (ENSOANG00000049366) DDX42 (ENSOANG00000000265) FTSJ3 (ENSOANG00000044242) PSMC5 (ENSOANG00000036065) SMARCD2 (ENSOANG00000006178) ENSOANG00000051242 PSMD11 (ENSOANG00000036241) #21 CDK5R1 (ENSOANG00000048451) #22 MYO1D (ENSOANG00000044349) #23 MAP3K14 (ENSOANG00000036858) ENSOANG00000032108 FMNL1 (ENSOANG00000012364) HEXIM1 (ENSOANG00000036664) ACBD4 (ENSOANG00000048249) PLCD3 (ENSOANG00000044708) NMT1 (ENSOANG00000043012) DCAKD (ENSOANG00000045874) ENSOANG00000039542 KIF18B (ENSOANG00000010540) ENSOANG00000037388 FAM187A (ENSOANG00000043685) ENSOANG00000036607 EFTUD2 (ENSOANG00000048763) Sauria ANCESTRAL SPECIES 29 ENSGT00530000063836.b ENSGT01050000244842.a.b.b.b ENSGT00950000182984.b.a.a ENSGT00940000165895 ENSGT00940000156059 ENSGT00940000161358 ENSGT01090000259987.b.b.a.a.b ENSGT00390000010523.c.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.a.a ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a Lepidosauria ANCESTRAL SPECIES 72 ENSGT00940000156447.b ENSGT00530000063836.b ENSGT01050000244842.a.b.b.b.n ENSGT00950000182984.b.a.a ENSGT00940000165895 ENSGT00940000156059 ENSGT00940000161358 ENSGT01090000259987.b.b.a.a.b ENSGT00390000010523.c.a ENSGT00950000183192.a.b ENSGT00940000158599 ENSGT00940000157854 ENSGT00530000064085 ENSGT00950000183080.a.b.b ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.b ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 Episquamata ANCESTRAL SPECIES 5 ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000161778 ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000162478 ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993 ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00530000063301.a.a #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00940000166580 ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.a ENSGT00940000161358 ENSGT00940000156059 ENSGT00940000165895 ENSGT00950000182984.b.a.a Laterata ANCESTRAL SPECIES 11 ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000161778 ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000162478 ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993 ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00530000063301.a.a #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00940000166580 ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.a ENSGT00940000161358 ENSGT00940000156059 ENSGT00950000182984.b.a.a ENSGT00390000016694 Argentine black and white tegu MODERN SPECIES 32 GRN (ENSSMRG00000007548) GJC1 (ENSSMRG00000007547) HIGD1B (ENSSMRG00000007544) EFTUD2 (ENSSMRG00000007533) CCDC103 (ENSSMRG00000007518) FAM187A (ENSSMRG00000007517) ENSSMRG00000007515 ENSSMRG00000007514 KIF18B (ENSSMRG00000007494) ENSSMRG00000007490 DCAKD (ENSSMRG00000007484) NMT1 (ENSSMRG00000007478) PLCD3 (ENSSMRG00000007473) ACBD4 (ENSSMRG00000007467) HEXIM1 (ENSSMRG00000007463) CDK5R1 (ENSSMRG00000007462) #22 MYO1D (ENSSMRG00000007445) #23 ENSSMRG00000007441 MAP3K14 (ENSSMRG00000007427) ENSSMRG00000007413 ENSSMRG00000007401 PSMD11 (ENSSMRG00000007369) #21 NSF (ENSSMRG00000007363) WNT3 (ENSSMRG00000007358) WNT9B (ENSSMRG00000007354) GOSR2 (ENSSMRG00000007344) ENSSMRG00000007343 RPRML (ENSSMRG00000007341) ITGB3 (ENSSMRG00000007328) EFCAB3 (ENSSMRG00000007283) ENSSMRG00000007278 Common wall lizard MODERN SPECIES 4 GRN (ENSPMRG00000014893) GJC1 (ENSPMRG00000014902) HIGD1B (ENSPMRG00000014907) EFTUD2 (ENSPMRG00000014919) CCDC103 (ENSPMRG00000014949) FAM187A (ENSPMRG00000014953) GFAP (ENSPMRG00000010853) KIF18B (ENSPMRG00000010858) C1QL1 (ENSPMRG00000010866) DCAKD (ENSPMRG00000010869) ENSPMRG00000010874 ENSPMRG00000010880 PLCD3 (ENSPMRG00000010884) ACBD4 (ENSPMRG00000010890) HEXIM1 (ENSPMRG00000010892) CDK5R1 (ENSPMRG00000010893) #22 MYO1D (ENSPMRG00000010899) #23 ENSPMRG00000010908 FMNL1 (ENSPMRG00000011022) PSMD11 (ENSPMRG00000011418) #21 NSF (ENSPMRG00000011432) WNT3 (ENSPMRG00000011447) ENSPMRG00000011451 WNT9B (ENSPMRG00000011459) GOSR2 (ENSPMRG00000011484) ENSPMRG00000011488 RPRML (ENSPMRG00000011491) ITGB3 (ENSPMRG00000011496) EFCAB3 (ENSPMRG00000011506) ENSPMRG00000011511 TLK2 (ENSPMRG00000011520) Toxicofera ANCESTRAL SPECIES 4 ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000161778 ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000156913.a ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993 ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00530000063301.a.a #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00940000166580 ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.b ENSGT00940000161358 ENSGT00940000156059 ENSGT00940000165895 ENSGT00950000182984.b.a.a Elapidae ANCESTRAL SPECIES 5 ENSGT00940000160724 ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000156913.a ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993.a ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00960000189239 ENSGT00940000156292 ENSGT00530000063301.a.a.g #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.b ENSGT00940000161358 ENSGT00940000156059 ENSGT00940000165895 ENSGT00950000182984.b.a.a ENSGT00390000016694 Elapidae_a ANCESTRAL SPECIES 81 ENSGT00940000160724.f ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000156913.a ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993.a ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00960000189239 ENSGT00940000156292 ENSGT00530000063301.a.a.g #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.b ENSGT00940000161358 ENSGT00940000156059 ENSGT00940000165895 ENSGT00950000182984.b.a.a ENSGT00390000016694 Acanthophiinae ANCESTRAL SPECIES 80 ENSGT00940000160724.f ENSGT00950000183184.b ENSGT00470000042293.a.b ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000155685 ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000159539 ENSGT00940000161200 ENSGT00940000156913.a ENSGT00550000075038 ENSGT00390000017837.a ENSGT00940000156993.a ENSGT00940000160739 ENSGT00390000002808.a ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00960000189239 ENSGT00940000156292 ENSGT00530000063301.a.a.g #21 ENSGT00530000064085 ENSGT00940000157854 ENSGT00940000158599 ENSGT00950000183192.a.b ENSGT00390000010523.c.a ENSGT01090000259987.b.b.a.a.b.b ENSGT00940000161358 ENSGT00940000156059 ENSGT00940000165895 ENSGT00950000182984.b.a.a ENSGT00390000016694 Mainland tiger snake MODERN SPECIES 200 ENSNSUG00000015591 FAM171A2 (ENSNSUG00000015592) GRN (ENSNSUG00000015594) GJC1 (ENSNSUG00000015595) EFTUD2 (ENSNSUG00000015598) CCDC103 (ENSNSUG00000015799) FAM187A (ENSNSUG00000015800) GFAP (ENSNSUG00000015801) KIF18B (ENSNSUG00000015831) ENSNSUG00000015833 DCAKD (ENSNSUG00000015834) NMT1 (ENSNSUG00000015850) ENSNSUG00000015851 ACBD4 (ENSNSUG00000015852) HEXIM1 (ENSNSUG00000015853) CDK5R1 (ENSNSUG00000015854) #22 MYO1D (ENSNSUG00000015855) #23 Eastern brown snake MODERN SPECIES 103 ITGA2B (ENSPTXG00000009737) FAM171A2 (ENSPTXG00000009734) GRN (ENSPTXG00000009733) GJC1 (ENSPTXG00000009732) EFTUD2 (ENSPTXG00000009731) CCDC103 (ENSPTXG00000009730) FAM187A (ENSPTXG00000009729) GFAP (ENSPTXG00000009728) KIF18B (ENSPTXG00000009726) ENSPTXG00000009725 DCAKD (ENSPTXG00000009724) NMT1 (ENSPTXG00000009723) PLCD3 (ENSPTXG00000009350) ACBD4 (ENSPTXG00000009348) HEXIM1 (ENSPTXG00000009347) CDK5R1 (ENSPTXG00000009346) #22 MYO1D (ENSPTXG00000009322) #23 ENSPTXG00000009261 ENSPTXG00000009259 FMNL1 (ENSPTXG00000009247) ENSPTXG00000009246 #21 NSF (ENSPTXG00000009243) WNT3 (ENSPTXG00000009242) WNT9B (ENSPTXG00000009178) GOSR2 (ENSPTXG00000009177) RPRML (ENSPTXG00000009176) ITGB3 (ENSPTXG00000009150) EFCAB3 (ENSPTXG00000009148) ENSPTXG00000009147 TLK2 (ENSPTXG00000009145) METTL16 (ENSPTXG00000009143) Blue-lipped sea krait MODERN SPECIES 1350 CDK5R1 (ENSLLTG00000004455) #22 Indian cobra MODERN SPECIES 337 FAM171A2 (ENSNNAG00000011549) GRN (ENSNNAG00000011605) GJC1 (ENSNNAG00000011678) EFTUD2 (ENSNNAG00000011703) CCDC103 (ENSNNAG00000011772) FAM187A (ENSNNAG00000011784) GFAP (ENSNNAG00000011806) KIF18B (ENSNNAG00000011935) ENSNNAG00000011994 DCAKD (ENSNNAG00000012007) NMT1 (ENSNNAG00000012060) PLCD3 (ENSNNAG00000007730) ENSNNAG00000008203 ACBD4 (ENSNNAG00000008234) ENSNNAG00000008283 CDK5R1 (ENSNNAG00000008303) #22 MYO1D (ENSNNAG00000008313) #23 ENSNNAG00000008365 ENSNNAG00000008379 ENSNNAG00000008444 ENSNNAG00000008564 FMNL1 (ENSNNAG00000008635) ENSNNAG00000009114 #21 NSF (ENSNNAG00000009234) WNT3 (ENSNNAG00000010341) WNT9B (ENSNNAG00000010402) GOSR2 (ENSNNAG00000010650) RPRML (ENSNNAG00000010669) ITGB3 (ENSNNAG00000010705) EFCAB3 (ENSNNAG00000011313) ENSNNAG00000011374 tuatara MODERN SPECIES 886 ENSSPUG00000010943 WNT9B (ENSSPUG00000010932) WNT3 (ENSSPUG00000010921) NSF (ENSSPUG00000010869) ENSSPUG00000010849 PSMD11 (ENSSPUG00000010781) #21 CDK5R1 (ENSSPUG00000010761) #22 MYO1D (ENSSPUG00000010727) #23 MAP3K14 (ENSSPUG00000010700) FMNL1 (ENSSPUG00000010606) ENSSPUG00000010577 HEXIM2 (ENSSPUG00000010568) HEXIM1 (ENSSPUG00000010560) ACBD4 (ENSSPUG00000010548) NMT1 (ENSSPUG00000010483) DCAKD (ENSSPUG00000010455) C1QL1 (ENSSPUG00000010445) KIF18B (ENSSPUG00000010421) GFAP (ENSSPUG00000010392) CCDC103 (ENSSPUG00000010273) EFTUD2 (ENSSPUG00000010249) HIGD1B (ENSSPUG00000010237) Archelosauria ANCESTRAL SPECIES 21 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 Cryptodira ANCESTRAL SPECIES 55 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000161200 ENSGT00940000159539.d ENSGT00530000063991.a ENSGT00390000004038 Testudinoidea ANCESTRAL SPECIES 46 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000161200 ENSGT00940000159539.d ENSGT00530000063991.a ENSGT00390000004038 Emydidae ANCESTRAL SPECIES 65 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000161200 ENSGT00940000159539.d ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Three-toed box turtle MODERN SPECIES 239 ENSTMTG00000018090 ENSTMTG00000018078 ARHGAP27 (ENSTMTG00000018033) TMEM98 (ENSTMTG00000018019) #24 GRN (ENSTMTG00000017982) FAM171A2 (ENSTMTG00000017971) ITGA2B (ENSTMTG00000017628) GPATCH8 (ENSTMTG00000017573) FZD2 (ENSTMTG00000017557) PSMD11 (ENSTMTG00000017539) #21 CDK5R1 (ENSTMTG00000017526) #22 MYO1D (ENSTMTG00000017486) #23 MAP3K14 (ENSTMTG00000017460) ENSTMTG00000017451 FMNL1 (ENSTMTG00000017164) ENSTMTG00000017114 HEXIM1 (ENSTMTG00000017110) PLCD3 (ENSTMTG00000017051) NMT1 (ENSTMTG00000017020) DCAKD (ENSTMTG00000017001) KIF18B (ENSTMTG00000016588) ENSTMTG00000016493 FAM187A (ENSTMTG00000016478) CCDC103 (ENSTMTG00000016469) EFTUD2 (ENSTMTG00000016401) HIGD1B (ENSTMTG00000016381) painted turtle MODERN SPECIES 696 SCPEP1 (ENSCPBG00000004573) RAB11FIP4 (ENSCPBG00000004593) #7 ENSCPBG00000004640 UTP6 (ENSCPBG00000004652) #9 SUZ12 (ENSCPBG00000004675) #10 CRLF3 (ENSCPBG00000004701) #11 ATAD5 (ENSCPBG00000004712) #12 TEFM (ENSCPBG00000004727) #13 ADAP2 (ENSCPBG00000004739) #14 ENSCPBG00000004765 RHOT1 (ENSCPBG00000004783) #16 RHBDL3 (ENSCPBG00000004814) #17 C17orf75 (ENSCPBG00000004828) #18 ZNF207 (ENSCPBG00000004840) #19 PSMD11 (ENSCPBG00000004859) #21 CDK5R1 (ENSCPBG00000004869) #22 MYO1D (ENSCPBG00000004886) #23 MAP3K14 (ENSCPBG00000004936) FMNL1 (ENSCPBG00000005140) ENSCPBG00000008845 ENSCPBG00000008849 HEXIM1 (ENSCPBG00000008858) ACBD4 (ENSCPBG00000008864) PLCD3 (ENSCPBG00000008873) NMT1 (ENSCPBG00000008881) DCAKD (ENSCPBG00000008885) KIF18B (ENSCPBG00000008886) GFAP (ENSCPBG00000008893) FAM187A (ENSCPBG00000008897) CCDC103 (ENSCPBG00000008902) EFTUD2 (ENSCPBG00000008904) Testudinidae ANCESTRAL SPECIES 57 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT01020000230794 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000161200 ENSGT00940000159539.d ENSGT00940000159539.c ENSGT00530000063991.a Abingdon island giant tortoise MODERN SPECIES 1927 TMEM98 (ENSCABG00000008314) #24 GRN (ENSCABG00000008307) FAM171A2 (ENSCABG00000008302) GPATCH8 (ENSCABG00000008300) FZD2 (ENSCABG00000008299) PSMD11 (ENSCABG00000008298) #21 CDK5R1 (ENSCABG00000008297) #22 Goode s thornscrub tortoise MODERN SPECIES 15 SCN4A (ENSGEVG00005005711) ENSGEVG00005005670 ENSGEVG00005005622 ENSGEVG00005005605 ENSGEVG00005005486 PLEKHM1 (ENSGEVG00005005403) ARHGAP27 (ENSGEVG00005005326) TMEM98 (ENSGEVG00005005248) #24 GRN (ENSGEVG00005005211) FAM171A2 (ENSGEVG00005004721) ITGA2B (ENSGEVG00005004398) GPATCH8 (ENSGEVG00005019861) FZD2 (ENSGEVG00005019857) ENSGEVG00005019854 PSMD11 (ENSGEVG00005019848) #21 CDK5R1 (ENSGEVG00005019842) #22 MYO1D (ENSGEVG00005019810) #23 MAP3K14 (ENSGEVG00005019787) ENSGEVG00005019779 FMNL1 (ENSGEVG00005019750) ENSGEVG00005019738 HEXIM1 (ENSGEVG00005019730) ACBD4 (ENSGEVG00005019719) PLCD3 (ENSGEVG00005019703) NMT1 (ENSGEVG00005019692) DCAKD (ENSGEVG00005019684) ENSGEVG00005019673 KIF18B (ENSGEVG00005019658) GFAP (ENSGEVG00005019558) FAM187A (ENSGEVG00005019532) CCDC103 (ENSGEVG00005019527) Archosauria ANCESTRAL SPECIES 20 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Australian saltwater crocodile MODERN SPECIES 66 SCN4A (ENSCPRG00005000803) CD79B (ENSCPRG00005000788) ENSCPRG00005000783 RDM1 (ENSCPRG00005000779) ENSCPRG00005000775 PLEKHM1 (ENSCPRG00005000768) ARHGAP27 (ENSCPRG00005000655) TMEM98 (ENSCPRG00005000628) #24 GRN (ENSCPRG00005000621) FAM171A2 (ENSCPRG00005000590) ENSCPRG00005000568 ENSCPRG00005000550 GPATCH8 (ENSCPRG00005000545) FZD2 (ENSCPRG00005000517) PSMD11 (ENSCPRG00005000377) #21 CDK5R1 (ENSCPRG00005000361) #22 MYO1D (ENSCPRG00005000311) #23 MAP3K14 (ENSCPRG00005000161) FMNL1 (ENSCPRG00005000131) ENSCPRG00005015508 HEXIM1 (ENSCPRG00005015504) ACBD4 (ENSCPRG00005015499) PLCD3 (ENSCPRG00005015493) NMT1 (ENSCPRG00005015490) DCAKD (ENSCPRG00005015489) OPA3 (ENSCPRG00005015485) ENSCPRG00005015481 RTN2 (ENSCPRG00005015475) FOSB (ENSCPRG00005015469) ENSCPRG00005015467 ENSCPRG00005015464 Aves ANCESTRAL SPECIES 26 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Neognathae ANCESTRAL SPECIES 23 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Galloanserae ANCESTRAL SPECIES 23 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Anatidae ANCESTRAL SPECIES 72 ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Duck MODERN SPECIES 19 ENSAPLG00000025296 ENSAPLG00000010362 ENSAPLG00000010630 ENSAPLG00000028589 ENSAPLG00000006324 SCN4A (ENSAPLG00000004906) CD79B (ENSAPLG00000004879) ENSAPLG00000004550 RDM1 (ENSAPLG00000004384) ENSAPLG00000016599 ENSAPLG00000004111 ITGA2B (ENSAPLG00000003235) GPATCH8 (ENSAPLG00000003095) FZD2 (ENSAPLG00000002180) PSMD11 (ENSAPLG00000002804) #21 CDK5R1 (ENSAPLG00000020487) #22 MYO1D (ENSAPLG00000005131) #23 MAP3K14 (ENSAPLG00000004431) FMNL1 (ENSAPLG00000003619) ENSAPLG00000030282 ENSAPLG00000020177 NMT1 (ENSAPLG00000009872) DCAKD (ENSAPLG00000026366) ENSAPLG00000010363 FAM187A (ENSAPLG00000021615) ENSAPLG00000010875 EFTUD2 (ENSAPLG00000011036) GJC1 (ENSAPLG00000001944) MEIOC (ENSAPLG00000003270) CCDC43 (ENSAPLG00000003028) ENSAPLG00000022397 Pink-footed goose MODERN SPECIES 267 PSMD11 (ENSABRG00000011795) #21 CDK5R1 (ENSABRG00000011835) #22 MYO1D (ENSABRG00000011918) #23 MAP3K14 (ENSABRG00000011977) FMNL1 (ENSABRG00000012062) ENSABRG00000012152 HEXIM1 (ENSABRG00000012173) ACBD4 (ENSABRG00000012188) PLCD3 (ENSABRG00000012232) NMT1 (ENSABRG00000012294) DCAKD (ENSABRG00000012329) C1QL1 (ENSABRG00000012377) KIF18B (ENSABRG00000012401) GFAP (ENSABRG00000012431) FAM187A (ENSABRG00000012438) CCDC103 (ENSABRG00000012442) ENSABRG00000012453 Phasianidae ANCESTRAL SPECIES 21 ENSGT00940000168169 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Japanese quail MODERN SPECIES 19 CD79B (ENSCJPG00005019126) ENSCJPG00005019125 ENSCJPG00005019124 RDM1 (ENSCJPG00005019123) PLEKHM1 (ENSCJPG00005019122) ENSCJPG00005019121 ARHGAP27 (ENSCJPG00005019119) ENSCJPG00005019118 TMEM98 (ENSCJPG00005019117) #24 OPA3 (ENSCJPG00005019116) ENSCJPG00005019114 ENSCJPG00005019113 GPATCH8 (ENSCJPG00005019110) FZD2 (ENSCJPG00005019108) PSMD11 (ENSCJPG00005019081) #21 CDK5R1 (ENSCJPG00005019075) #22 MYO1D (ENSCJPG00005019070) #23 MAP3K14 (ENSCJPG00005019066) FMNL1 (ENSCJPG00005019038) ENSCJPG00005019035 HEXIM1 (ENSCJPG00005019034) ACBD4 (ENSCJPG00005019033) PLCD3 (ENSCJPG00005019032) ENSCJPG00005019031 NMT1 (ENSCJPG00005019030) DCAKD (ENSCJPG00005019029) ENSCJPG00005019028 KIF18B (ENSCJPG00005019027) FAM187A (ENSCJPG00005019026) GFAP (ENSCJPG00005019025) CCDC103 (ENSCJPG00005019024) Phasianidae_b ANCESTRAL SPECIES 21 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00960000191738 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000162478 ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Turkey MODERN SPECIES 580 ENSMGAG00000022248 #22 Chicken MODERN SPECIES 19 CD79B (ENSGALG00010023621) GH (ENSGALG00010023602) RDM1 (ENSGALG00010023580) ENSGALG00010023565 ENSGALG00010026786 PLEKHM1 (ENSGALG00010026017) ENSGALG00010023469 ARHGAP27 (ENSGALG00010023551) TMEM98 (ENSGALG00010023527) #24 ENSGALG00010023487 ENSGALG00010026041 ITGA2B (ENSGALG00010026006) GPATCH8 (ENSGALG00010021148) FZD2 (ENSGALG00010026346) PSMD11 (ENSGALG00010024133) #21 CDK5R1 (ENSGALG00010024126) #22 MYO1D (ENSGALG00010024096) #23 MAP3K14 (ENSGALG00010024019) FMNL1 (ENSGALG00010023984) ENSGALG00010023891 HEXIM1 (ENSGALG00010023874) ACBD4 (ENSGALG00010023857) PLCD3 (ENSGALG00010023815) NMT1 (ENSGALG00010023799) DCAKD (ENSGALG00010026796) C1QL1 (ENSGALG00010023752) KIF18B (ENSGALG00010022002) GFAP (ENSGALG00010021974) FAM187A (ENSGALG00010026363) CCDC103 (ENSGALG00010021969) EFTUD2 (ENSGALG00010021934) Neognathae_b ANCESTRAL SPECIES 23 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.b ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 Passeriformes ANCESTRAL SPECIES 40 ENSGT00940000154904.b.m.a.a ENSGT00390000008726.h.b.f.b ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.b ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000159539 ENSGT00390000004038 ENSGT00940000155685 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000159790 Passeriformes_d ANCESTRAL SPECIES 25 ENSGT00390000008726.h.b.f.b ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.b ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT01100000263998 ENSGT00940000156497 ENSGT00940000156292.f ENSGT00940000163949 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000159539 ENSGT00390000004038 ENSGT00940000155685 ENSGT01090000260005.a.a.a.b.a.a.b Flycatcher MODERN SPECIES 19 ENSFALG00000013665 ENSFALG00000026972 ENSFALG00000023624 SCN4A (ENSFALG00000013700) ENSFALG00000024588 ENSFALG00000023956 ENSFALG00000028362 ENSFALG00000009436 ENSFALG00000009448 ENSFALG00000009465 #24 ENSFALG00000024514 ENSFALG00000028999 ENSFALG00000009554 FZD2 (ENSFALG00000015116) PSMD11 (ENSFALG00000009563) #21 ENSFALG00000025483 #22 MYO1D (ENSFALG00000009572) #23 ENSFALG00000026636 ENSFALG00000023593 ENSFALG00000009590 ENSFALG00000009596 ENSFALG00000009606 GFAP (ENSFALG00000007541) CCDC103 (ENSFALG00000007548) EFTUD2 (ENSFALG00000007551) GJC1 (ENSFALG00000014315) ADAM11 (ENSFALG00000007556) ENSFALG00000007562 CCDC43 (ENSFALG00000023360) MEIOC (ENSFALG00000007575) NSF (ENSFALG00000007579) Passeriformes_g ANCESTRAL SPECIES 26 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT01100000263998 ENSGT00940000156497 ENSGT00940000156292.f ENSGT00940000163949 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000159539 ENSGT00390000004038 ENSGT00940000155685 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000159790 ENSGT00530000063909.a ENSGT00390000015009 Passeroidea ANCESTRAL SPECIES 51 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT01100000263998 ENSGT00940000156497 ENSGT00940000156292.f ENSGT00940000163949 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000159539 ENSGT00390000004038 ENSGT00940000155685 ENSGT01090000260005.a.a.a.b.a.a.b ENSGT00940000159790 ENSGT00530000063909.a ENSGT00390000015009 Zebra finch MODERN SPECIES 20 CACNB1 (ENSTGUG00000019323) PLXDC1 (ENSTGUG00000028549) FBXO47 (ENSTGUG00000002179) LASP1NB (ENSTGUG00000029706) LASP1 (ENSTGUG00000002172) RPL23 (ENSTGUG00000002167) ENSTGUG00000020998 PLEKHM1 (ENSTGUG00000003309) ARHGAP27 (ENSTGUG00000027504) TMEM98 (ENSTGUG00000022473) #24 GRN (ENSTGUG00000013758) FAM171A2 (ENSTGUG00000023513) ITGA2B (ENSTGUG00000020445) GPATCH8 (ENSTGUG00000029123) PSMD11 (ENSTGUG00000002139) #21 CDK5R1 (ENSTGUG00000021551) #22 MYO1D (ENSTGUG00000002110) #23 ENSTGUG00000027823 MAP3K14 (ENSTGUG00000002094) ENSTGUG00000023075 ENSTGUG00000019085 ENSTGUG00000023005 ENSTGUG00000025981 ENSTGUG00000028058 PLCD3 (ENSTGUG00000014417) HEXIM1 (ENSTGUG00000020843) ENSTGUG00000019907 DCAKD (ENSTGUG00000002089) ENSTGUG00000021772 KIF18B (ENSTGUG00000029338) ENSTGUG00000002087 Common canary MODERN SPECIES 42 STARD3 (ENSSCAG00000008196) CDK12 (ENSSCAG00000008202) MED1 (ENSSCAG00000008212) FBXL20 (ENSSCAG00000008215) ENSSCAG00000008230 RPL19 (ENSSCAG00000008237) PLEKHM1 (ENSSCAG00000008258) ENSSCAG00000008279 ARHGAP27 (ENSSCAG00000008308) TMEM98 (ENSSCAG00000008325) #24 ENSSCAG00000008337 ITGA2B (ENSSCAG00000008388) GPATCH8 (ENSSCAG00000008436) FZD2 (ENSSCAG00000008440) PSMD11 (ENSSCAG00000008447) #21 ENSSCAG00000008457 #22 MYO1D (ENSSCAG00000008461) #23 ENSSCAG00000008470 MAP3K14 (ENSSCAG00000008474) FMNL1 (ENSSCAG00000008478) ENSSCAG00000008480 PLCD3 (ENSSCAG00000008489) NMT1 (ENSSCAG00000008503) DCAKD (ENSSCAG00000008511) GFAP (ENSSCAG00000008514) CCDC103 (ENSSCAG00000008517) EFTUD2 (ENSSCAG00000008521) GJC1 (ENSSCAG00000008531) ENSSCAG00000008590 CCDC43 (ENSSCAG00000008597) MEIOC (ENSSCAG00000008604) Medium ground finch MODERN SPECIES 220 PLEKHM1 (ENSGFOG00000005972) ARHGAP27 (ENSGFOG00000005955) ENSGFOG00000005948 GRN (ENSGFOG00000005927) ENSGFOG00000005912 GPATCH8 (ENSGFOG00000005908) FZD2 (ENSGFOG00000005896) PSMD11 (ENSGFOG00000005870) #21 ENSGFOG00000005862 #22 MYO1D (ENSGFOG00000005225) #23 MAP3K14 (ENSGFOG00000005076) FMNL1 (ENSGFOG00000004913) PLCD3 (ENSGFOG00000004843) NMT1 (ENSGFOG00000004817) DCAKD (ENSGFOG00000004803) FAM187A (ENSGFOG00000004789) CCDC103 (ENSGFOG00000004758) EFTUD2 (ENSGFOG00000004725) GJC1 (ENSGFOG00000004720) ENSGFOG00000004707 CCDC43 (ENSGFOG00000004676) MEIOC (ENSGFOG00000004626) NSF (ENSGFOG00000004590) WNT3 (ENSGFOG00000004580) Neognathae_c ANCESTRAL SPECIES 26 ENSGT00940000166534 ENSGT00940000159417 ENSGT00940000154363.B ENSGT00950000182818.D.a ENSGT00390000018397 ENSGT00530000063282 ENSGT00940000155111 ENSGT00950000182860.a.a.a ENSGT00390000012062 #24 ENSGT00470000042293.a.b ENSGT00950000183184.b ENSGT00940000160724 ENSGT00940000159523 ENSGT00940000161812 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000156292 ENSGT00390000002808.a ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00940000161200 ENSGT00940000159539 ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 ENSGT01090000260005.a.a.a.b.a.a.b Kakapo MODERN SPECIES 12 ENSSHBG00005014189 ENSSHBG00005014182 ENSSHBG00005014173 ENSSHBG00005014160 ENSSHBG00005014149 ENSSHBG00005014139 PLEKHM1 (ENSSHBG00005014119) ARHGAP27 (ENSSHBG00005013698) TMEM98 (ENSSHBG00005013674) #24 GRN (ENSSHBG00005013657) FAM171A2 (ENSSHBG00005013640) ITGA2B (ENSSHBG00005013548) GPATCH8 (ENSSHBG00005013505) FZD2 (ENSSHBG00005013494) PSMD11 (ENSSHBG00005013471) #21 CDK5R1 (ENSSHBG00005013454) #22 MYO1D (ENSSHBG00005012941) #23 MAP3K14 (ENSSHBG00005012754) FMNL1 (ENSSHBG00005012698) HEXIM1 (ENSSHBG00005012679) ACBD4 (ENSSHBG00005012665) PLCD3 (ENSSHBG00005012635) NMT1 (ENSSHBG00005012610) DCAKD (ENSSHBG00005012603) ENSSHBG00005012591 KIF18B (ENSSHBG00005012447) GFAP (ENSSHBG00005012401) FAM187A (ENSSHBG00005012388) CCDC103 (ENSSHBG00005012381) EFTUD2 (ENSSHBG00005012361) GJC1 (ENSSHBG00005012344) Golden eagle MODERN SPECIES 24 SCN4A (ENSACCG00020016022) CD79B (ENSACCG00020016046) ENSACCG00020016073 RDM1 (ENSACCG00020016090) ENSACCG00020016101 PLEKHM1 (ENSACCG00020016111) ENSACCG00020016122 ARHGAP27 (ENSACCG00020016149) TMEM98 (ENSACCG00020016177) #24 ENSACCG00020016207 FAM171A2 (ENSACCG00020016232) ITGA2B (ENSACCG00020016242) GPATCH8 (ENSACCG00020016255) FZD2 (ENSACCG00020016265) PSMD11 (ENSACCG00020016270) #21 CDK5R1 (ENSACCG00020016275) #22 MYO1D (ENSACCG00020016306) #23 MAP3K14 (ENSACCG00020016346) FMNL1 (ENSACCG00020016360) HEXIM1 (ENSACCG00020016371) ACBD4 (ENSACCG00020016374) PLCD3 (ENSACCG00020016397) NMT1 (ENSACCG00020016412) DCAKD (ENSACCG00020016417) ENSACCG00020016422 KIF18B (ENSACCG00020016425) GFAP (ENSACCG00020016439) FAM187A (ENSACCG00020016444) CCDC103 (ENSACCG00020016446) EFTUD2 (ENSACCG00020016459) GJC1 (ENSACCG00020016464) African ostrich MODERN SPECIES 990 SCN4A (ENSSCUG00000018414) CD79B (ENSSCUG00000018410) ENSSCUG00000018406 RDM1 (ENSSCUG00000018402) ENSSCUG00000018398 PLEKHM1 (ENSSCUG00000018396) ARHGAP27 (ENSSCUG00000018394) TMEM98 (ENSSCUG00000018390) #24 ENSSCUG00000018387 ENSSCUG00000018383 GPATCH8 (ENSSCUG00000018381) FZD2 (ENSSCUG00000018379) PSMD11 (ENSSCUG00000018371) #21 ENSSCUG00000018369 #22 MYO1D (ENSSCUG00000018368) #23 MAP3K14 (ENSSCUG00000018367) FMNL1 (ENSSCUG00000018366) ENSSCUG00000018365 ENSSCUG00000018363 PLCD3 (ENSSCUG00000018362) NMT1 (ENSSCUG00000018360) DCAKD (ENSSCUG00000018359) KIF18B (ENSSCUG00000018358) GFAP (ENSSCUG00000018357) FAM187A (ENSSCUG00000018356) CCDC103 (ENSSCUG00000018355) EFTUD2 (ENSSCUG00000018354) GJC1 (ENSSCUG00000018353) ENSSCUG00000018352 Anura ANCESTRAL SPECIES 77 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 ENSGT00940000156497 ENSGT00940000163949 ENSGT00940000156292 ENSGT00390000002808 ENSGT00940000160739 ENSGT00940000156993 ENSGT00390000017837.a ENSGT00550000075038 ENSGT00940000156913.a ENSGT00530000063991.a ENSGT00390000004038 ENSGT00940000155685 ENSGT00940000161778 ENSGT01090000260005.a.a.a.b.a.a.b Frog MODERN SPECIES 1 ENSXETG00000034840 nags (ENSXETG00000003384) tmem101 (ENSXETG00000003382) ccdc43 (ENSXETG00000003386) dbf4b (ENSXETG00000003387) adam11 (ENSXETG00000003388) ENSXETG00000036591 gjc1 (ENSXETG00000043536) higd1b (ENSXETG00000003392) eftud2 (ENSXETG00000003394) ccdc103 (ENSXETG00000003402) ENSXETG00000046307 usf3 (ENSXETG00000003175) dcakd (ENSXETG00000003179) psmd11 (ENSXETG00000029937) #21 cdk5r1 (ENSXETG00000044833) #22 myo1d (ENSXETG00000003194) #23 map3k14 (ENSXETG00000027243) ENSXETG00000035184 mylkl (ENSXETG00000003217) fmnl1 (ENSXETG00000003221) ENSXETG00000036785 hexim1 (ENSXETG00000047472) ENSXETG00000040348 acbd4 (ENSXETG00000033522) plcd3 (ENSXETG00000003234) nmt1 (ENSXETG00000003237) cdc27 (ENSXETG00000003238) ENSXETG00000048843 kansl1 (ENSXETG00000003239) mapt (ENSXETG00000003240) Leishan spiny toad MODERN SPECIES 3 ENSLLEG00000019929 ENSLLEG00000019967 ENSLLEG00000020010 ENSLLEG00000020032 ENSLLEG00000020051 ENSLLEG00000020065 ENSLLEG00000020086 ENSLLEG00000020107 ENSLLEG00000020139 ENSLLEG00000020162 ENSLLEG00000020196 ENSLLEG00000020260 ENSLLEG00000020291 ENSLLEG00000020316 PSMD11 (ENSLLEG00000020400) #21 ENSLLEG00000020859 #22 MYO1D (ENSLLEG00000020914) #23 ENSLLEG00000021494 ENSLLEG00000021626 ENSLLEG00000021652 ENSLLEG00000021773 ENSLLEG00000022039 ACBD4 (ENSLLEG00000022082) ENSLLEG00000022354 PLCD3 (ENSLLEG00000022382) NMT1 (ENSLLEG00000022651) ENSLLEG00000023022 DCAKD (ENSLLEG00000023038) C1QL1 (ENSLLEG00000023093) FAM187A (ENSLLEG00000023133) CCDC103 (ENSLLEG00000023227) Coelacanth MODERN SPECIES 683 GOSR2 (ENSLACG00000003069) ENSLACG00000022344 WNT9B (ENSLACG00000005608) WNT3 (ENSLACG00000007767) NSF (ENSLACG00000008120) ENSLACG00000009882 PSMD11 (ENSLACG00000010294) #21 CDK5R1 (ENSLACG00000010746) #22 MYO1D (ENSLACG00000011465) #23 ENSLACG00000011794 ENSLACG00000012780 VDAC3 (ENSLACG00000014148) DKK4 (ENSLACG00000014455) POLB (ENSLACG00000014637) ENKD1 (ENSLACG00000015037) ENSLACG00000015177 ENSLACG00000015410 ENSLACG00000015438 Actinopterygii ANCESTRAL SPECIES 536 ENSGT00940000157854 ENSGT00530000064085 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 Neopterygii ANCESTRAL SPECIES 391 ENSGT00940000157917.a.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085 ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b #22 ENSGT00940000157411 #23 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 41 ENSGT00940000157744 ENSGT00940000163448 ENSGT00940000156241 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00940000162682.B ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00940000160113 ENSGT00940000154152.a ENSGT00390000017856.b ENSGT00940000166856 ENSGT00940000155029.c.b Clupeocephala ANCESTRAL SPECIES 43 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a ENSGT00940000160113 ENSGT00390000017856.b Euteleosteomorpha ANCESTRAL SPECIES 101 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 100 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.a.a ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 299 ENSGT00530000063301.a.a.c.a.e #21 ENSGT00390000008812.b.b.a.a.a #22 ENSGT00940000157411.i #23 ENSGT00940000153704.B.c.d ENSGT00940000166447.d ENSGT00940000157439.b.c ENSGT00940000172406 ENSGT00390000011219.m.b ENSGT00950000182892.a.b.a.b.a.c ENSGT00940000154152.a.a.a ENSGT00940000160113.k ENSGT00390000017856.b.c ENSGT01000000220463 ENSGT00940000158354.c.a.c ENSGT00940000165065.b.c ENSGT00940000161434 ENSGT00950000183025.a.db Salmoninae_a ANCESTRAL SPECIES 45 ENSGT00950000183098.a.b.d ENSGT00390000016335.h.h ENSGT00940000166248.a.c ENSGT00940000161341.a.a.e ENSGT00940000162682.B.a.b ENSGT00390000014900.b.b.b.a ENSGT00940000154018.a.a ENSGT00940000158142.f ENSGT00940000155510.u.a.b ENSGT00940000155510.u.a.a ENSGT00940000157917.a.a.a.b ENSGT00950000183178.b.b.b.c.b ENSGT00940000157854.w.a ENSGT00530000064085.c.c ENSGT00530000063301.a.a.c.a.e #21 ENSGT00390000008812.b.b.a.a.a #22 ENSGT00940000157411.i #23 ENSGT00940000153704.B.c.d ENSGT00940000166447.d ENSGT00940000157439.b.c ENSGT00940000172406 ENSGT00390000011219.m.b ENSGT00950000182892.a.b.a.b.a.c ENSGT00940000154152.a.a.a ENSGT00940000160113.k ENSGT00390000017856.b.c ENSGT01000000221647 ENSGT00940000159774.d.b ENSGT00940000158354.c.a.c ENSGT00940000165065.b.c ENSGT00950000183025.a.db Oncorhynchus ANCESTRAL SPECIES 63 ENSGT01000000220396 ENSGT00940000160651.b ENSGT00810000125570.c ENSGT00940000158109.b ENSGT00530000066748.d ENSGT00940000154852.a.e ENSGT00940000154018.a.a ENSGT00940000158142.f ENSGT00940000155510.u.a.b ENSGT00940000155510.u.a.a ENSGT00940000157917.a.a.a.b ENSGT00950000183178.b.b.b.c.b ENSGT00940000157854.w.a ENSGT00530000064085.c.c ENSGT00530000063301.a.a.c.a.e #21 ENSGT00390000008812.b.b.a.a.a #22 ENSGT00940000157411.i #23 ENSGT00940000153704.B.c.d ENSGT00940000166447.d ENSGT00940000157439.b.c ENSGT00940000172406 ENSGT00390000011219.m.b ENSGT00940000154534.b.b.d ENSGT00950000182892.a.b.a.b.a.c ENSGT00940000154152.a.a.a ENSGT00940000160113.k ENSGT00390000017856.b.c ENSGT01000000221647 ENSGT01000000220463 ENSGT00940000158354.c.a.c ENSGT00940000165065.b.c Oncorhynchus_a ANCESTRAL SPECIES 69 ENSGT01000000220396 ENSGT00940000160651.b.b ENSGT00810000125570.c ENSGT00940000158109.b ENSGT00530000066748.d ENSGT00940000154852.a.e ENSGT00940000154018.a.a ENSGT00940000158142.f ENSGT00940000155510.u.a.b ENSGT00940000155510.u.a.a ENSGT00940000157917.a.a.a.b ENSGT00950000183178.b.b.b.c.b ENSGT00940000157854.w.a ENSGT00530000064085.c.c ENSGT00530000063301.a.a.c.a.e #21 ENSGT00390000008812.b.b.a.a.a #22 ENSGT00940000157411.i #23 ENSGT00940000153704.B.c.d ENSGT00940000166447.d ENSGT00940000157439.b.c ENSGT00390000011219.m.b ENSGT00940000154534.b.b.d ENSGT00950000182892.a.b.a.b.a.c ENSGT00940000154152.a.a.a ENSGT00940000160113.k ENSGT00390000017856.b.c ENSGT01000000221647 ENSGT01000000220463 ENSGT00940000158354.c.a.c ENSGT00940000165065.b.c ENSGT00950000183025.a.db Coho salmon MODERN SPECIES 17 wdr24 (ENSOKIG00005048857) zgc:112496 (ENSOKIG00005048872) rhbdl1 (ENSOKIG00005048890) h1-0 (ENSOKIG00005048906) ENSOKIG00005048910 SBK1 (ENSOKIG00005048921) meox1 (ENSOKIG00005048924) ETV4 (ENSOKIG00005048930) DHX8 (ENSOKIG00005049000) DHX8 (ENSOKIG00005049419) THRA (ENSOKIG00005049611) ENSOKIG00005049837 wnt3 (ENSOKIG00005049842) nsfb (ENSOKIG00005049879) psmd11b (ENSOKIG00005050034) #21 cdk5r1b (ENSOKIG00005050039) #22 MYO1D (ENSOKIG00005050047) #23 ENSOKIG00005050071 TBKBP1 (ENSOKIG00005050075) tbx21 (ENSOKIG00005050077) osbpl7 (ENSOKIG00005050087) pnpo (ENSOKIG00005050105) NFE2L1 (ENSOKIG00005050115) ENSOKIG00005050118 ENSOKIG00005050124 skap1 (ENSOKIG00005050132) ENSOKIG00005050142 HOXB5 (ENSOKIG00005006126) hoxb6b (ENSOKIG00005006134) ENSOKIG00005006149 ENSOKIG00005006204 Chinook salmon MODERN SPECIES 17 tmem106a (ENSOTSG00005047409) arl4d (ENSOTSG00005047408) SOST (ENSOTSG00005047407) ENSOTSG00005047406 ENSOTSG00005047405 ##7 telo2 (ENSOTSG00005047386) meox1 (ENSOTSG00005047384) etv4 (ENSOTSG00005047383) DHX8 (ENSOTSG00005047117) THRA (ENSOTSG00005047067) ormdl3 (ENSOTSG00005047066) ENSOTSG00005047065 wnt3 (ENSOTSG00005047064) nsfb (ENSOTSG00005046544) psmd11b (ENSOTSG00005046532) #21 cdk5r1b (ENSOTSG00005046528) #22 MYO1D (ENSOTSG00005046497) #23 ENSOTSG00005046496 tbx21 (ENSOTSG00005046495) osbpl7 (ENSOTSG00005046312) pnpo (ENSOTSG00005046298) prr15lb (ENSOTSG00005046292) NFE2L1 (ENSOTSG00005046289) ENSOTSG00005046288 ENSOTSG00005046283 skap1 (ENSOTSG00005046281) ENSOTSG00005046264 ENSOTSG00005046262 hoxb5b (ENSOTSG00005046260) hoxb6b (ENSOTSG00005046258) ENSOTSG00005046252 Rainbow trout MODERN SPECIES 12 ENSOMYG00000017414 ENSOMYG00000017552 ENSOMYG00000017828 ENSOMYG00000063210 ENSOMYG00000017846 ENSOMYG00000053297 meox1 (ENSOMYG00000017853) ENSOMYG00000017863 DHX8 (ENSOMYG00000020305) ENSOMYG00000061952 ENSOMYG00000020950 ENSOMYG00000022331 ENSOMYG00000022370 nsfb (ENSOMYG00000023007) psmd11b (ENSOMYG00000026111) #21 ENSOMYG00000026236 #22 ENSOMYG00000027153 #23 ENSOMYG00000031829 tbx21 (ENSOMYG00000031836) osbpl7 (ENSOMYG00000031874) ENSOMYG00000028974 pnpo (ENSOMYG00000029098) ENSOMYG00000029122 NFE2L1 (ENSOMYG00000029147) ENSOMYG00000029159 ENSOMYG00000029187 skap1 (ENSOMYG00000029211) ENSOMYG00000029235 ENSOMYG00000029271 ENSOMYG00000029279 hoxb6b (ENSOMYG00000029292) Salmo ANCESTRAL SPECIES 31 ENSGT00950000183098.a.b.d ENSGT00390000016335.h.h ENSGT00940000166248.a.c ENSGT00940000161341.a.a.e ENSGT00940000162682.B.a.b ENSGT00390000014900.b.b.b.a ENSGT00940000154018.a.a ENSGT00940000158142.f ENSGT00940000155510.u.a.b ENSGT00940000155510.u.a.a ENSGT00940000157917.a.a.a.b ENSGT00950000183178.b.b.b.c.b ENSGT00940000157854.w.a ENSGT00530000064085.c.c ENSGT00530000063301.a.a.c.a.e #21 ENSGT00390000008812.b.b.a.a.a #22 ENSGT00940000157411.i #23 ENSGT00940000153704.B.c.d ENSGT00940000166447.d ENSGT00940000157439.b.c ENSGT00940000172406 ENSGT00390000011219.m.b ENSGT00950000182892.a.b.a.b.a.c ENSGT00940000154152.a.a.a ENSGT00940000160113.k ENSGT00390000017856.b.c ENSGT01000000221647 ENSGT00940000158354.c.a.c ENSGT00940000165065.b.c ENSGT00950000183025.a.db ENSGT00390000007843.d Atlantic salmon MODERN SPECIES 20 tmem106a (ENSSSAG00000076078) arl4d (ENSSSAG00000076073) ENSSSAG00000108015 SOST (ENSSSAG00000088726) meox1 (ENSSSAG00000076066) DHX8 (ENSSSAG00000113538) etv4 (ENSSSAG00000076063) DHX8 (ENSSSAG00000075492) ENSSSAG00000093701 ENSSSAG00000107678 ormdl3 (ENSSSAG00000098798) ENSSSAG00000074396 wnt3 (ENSSSAG00000105288) nsfb (ENSSSAG00000072516) psmd11b (ENSSSAG00000072465) #21 cdk5r1b (ENSSSAG00000102378) #22 ENSSSAG00000096896 ENSSSAG00000067488 #23 TBKBP1 (ENSSSAG00000015313) tbx21 (ENSSSAG00000067359) osbpl7 (ENSSSAG00000066660) ENSSSAG00000066622 pnpo (ENSSSAG00000066572) NFE2L1 (ENSSSAG00000095440) ENSSSAG00000066552 ENSSSAG00000066541 SKAP1 (ENSSSAG00000066533) ENSSSAG00000085163 ENSSSAG00000066515 ENSSSAG00000101753 Hampin (ENSSSAG00000066494) River trout MODERN SPECIES 1 psme3 (ENSSTUG00000007920) nbr1a (ENSSTUG00000007897) tmem106a (ENSSTUG00000007891) arl4d (ENSSTUG00000007873) ENSSTUG00000007862 SOST (ENSSTUG00000007854) ENSSTUG00000007847 meox1 (ENSSTUG00000007839) etv4 (ENSSTUG00000007794) DHX8 (ENSSTUG00000006798) THRA (ENSSTUG00000005628) ormdl3 (ENSSTUG00000005562) wnt3 (ENSSTUG00000005517) nsfb (ENSSTUG00000001411) psmd11b (ENSSTUG00000000973) #21 cdk5r1b (ENSSTUG00000013467) #22 MYO1D (ENSSTUG00000013020) #23 TBKBP1 (ENSSTUG00000012972) tbx21 (ENSSTUG00000012960) osbpl7 (ENSSTUG00000012941) ENSSTUG00000012884 pnpo (ENSSTUG00000012768) ENSSTUG00000012752 ENSSTUG00000012748 NFE2L1 (ENSSTUG00000012743) ENSSTUG00000012731 ENSSTUG00000012696 skap1 (ENSSTUG00000012671) ENSSTUG00000012597 HOXB5 (ENSSTUG00000012584) hoxb6b (ENSSTUG00000012576) Huchen MODERN SPECIES 160 psmd11b (ENSHHUG00000000673) #21 cdk5r1b (ENSHHUG00000000788) #22 MYO1D (ENSHHUG00000000794) #23 ENSHHUG00000000857 TBKBP1 (ENSHHUG00000000833) tbx21 (ENSHHUG00000000861) osbpl7 (ENSHHUG00000000872) pnpo (ENSHHUG00000000895) ENSHHUG00000001031 NFE2L1 (ENSHHUG00000001149) ENSHHUG00000001160 ENSHHUG00000001172 skap1 (ENSHHUG00000001182) hoxb1b (ENSHHUG00000001260) ENSHHUG00000001390 hoxb5b (ENSHHUG00000001414) hoxb6b (ENSHHUG00000001425) Salmoninae ANCESTRAL SPECIES 23 ENSGT00950000183150.a.a.b.f ENSGT00950000183098.a.b.c ENSGT00390000016335.h.g ENSGT00940000166248.a.d ENSGT00940000161341.a.a.f ENSGT00940000162682.B.a.a ENSGT00390000014900.b.b.b.b ENSGT00940000154018.a.b ENSGT00940000158142.e ENSGT00940000155510.u.b ENSGT00940000157917.a.a.a.a ENSGT00950000183178.b.b.b.c.a ENSGT00940000157854.w.b ENSGT00530000064085.c.d ENSGT00530000063301.a.a.c.a.f #21 ENSGT00390000008812.b.b.a.a.b #22 ENSGT00940000157411.j #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c.c ENSGT00940000166447.c ENSGT00940000157439.b.d ENSGT00390000000603 ENSGT00390000011219.m.a ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.d ENSGT00940000154152.a.a.b ENSGT00940000160113.l ENSGT00390000017856.b.d Salmoninae_a ANCESTRAL SPECIES 17 ENSGT00950000183150.a.a.b.f ENSGT00950000183098.a.b.c ENSGT00390000016335.h.g ENSGT00940000166248.a.d ENSGT00940000161341.a.a.f ENSGT00940000162682.B.a.a ENSGT00390000014900.b.b.b.b.a ENSGT00940000154018.a.b ENSGT00940000158142.e ENSGT00940000155510.u.b ENSGT00940000157917.a.a.a.a ENSGT00950000183178.b.b.b.c.a ENSGT00940000157854.w.b ENSGT00530000064085.c.d ENSGT00530000063301.a.a.c.a.f #21 ENSGT00390000008812.b.b.a.a.b #22 ENSGT00940000157411.j #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c.c ENSGT00940000166447.c ENSGT00940000157439.b.d ENSGT00390000000603 ENSGT00390000011219.m.a ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.d ENSGT00940000154152.a.a.b ENSGT00940000160113.l ENSGT00390000017856.b.d Salmo ANCESTRAL SPECIES 3 ENSGT00950000183150.a.a.b.f ENSGT00950000183098.a.b.c ENSGT00390000016335.h.g ENSGT00940000166248.a.d ENSGT00940000161341.a.a.f ENSGT00940000162682.B.a.a ENSGT00390000014900.b.b.b.b.a ENSGT00940000154018.a.b ENSGT00940000158142.e ENSGT00940000155510.u.b ENSGT00940000157917.a.a.a.a ENSGT00950000183178.b.b.b.c.a ENSGT00940000157854.w.b ENSGT00530000064085.c.d ENSGT00530000063301.a.a.c.a.f #21 ENSGT00390000008812.b.b.a.a.b #22 ENSGT00940000157411.j #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c.c ENSGT00940000166447.c ENSGT00940000157439.b.d ENSGT00390000000603 ENSGT00390000011219.m.a ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a.d ENSGT00940000154152.a.a.b ENSGT00940000160113.l ENSGT00390000017856.b.d ENSGT00940000159503 Atlantic salmon MODERN SPECIES 10 nbr1a (ENSSSAG00000075301) psme3 (ENSSSAG00000075257) ENSSSAG00000092613 tmem106a (ENSSSAG00000075308) ARL4D (ENSSSAG00000116077) ENSSSAG00000075323 SOST (ENSSSAG00000086336) meox1 (ENSSSAG00000093864) etv4 (ENSSSAG00000075346) DHX8 (ENSSSAG00000075459) ENSSSAG00000076909 ormdl3 (ENSSSAG00000105314) wnt3 (ENSSSAG00000077501) nsfb (ENSSSAG00000077571) psmd11b (ENSSSAG00000078688) #21 cdk5r1b (ENSSSAG00000101629) #22 ENSSSAG00000006495 #23 ENSSSAG00000100824 ENSSSAG00000083346 TBKBP1 (ENSSSAG00000096340) tbx21 (ENSSSAG00000015324) osbpl7 (ENSSSAG00000015453) pnpo (ENSSSAG00000029666) mrpl10 (ENSSSAG00000104339) prr15lb (ENSSSAG00000106114) cdk5rap3 (ENSSSAG00000030149) NFE2L1 (ENSSSAG00000114824) ENSSSAG00000030773 snx11 (ENSSSAG00000031221) skap1 (ENSSSAG00000031353) HoxB1ba (ENSSSAG00000109797) River trout MODERN SPECIES 11 g6pc1a.2 (ENSSTUG00000032524) g6pc1a.1 (ENSSTUG00000032560) psme3 (ENSSTUG00000032585) nbr1a (ENSSTUG00000033026) tmem106a (ENSSTUG00000033048) arl4d (ENSSTUG00000033064) SOST (ENSSTUG00000033079) meox1 (ENSSTUG00000033095) etv4 (ENSSTUG00000033108) DHX8 (ENSSTUG00000033181) THRA (ENSSTUG00000034118) ormdl3 (ENSSTUG00000035643) wnt3 (ENSSTUG00000035650) nsfb (ENSSTUG00000035705) psmd11b (ENSSTUG00000035992) #21 cdk5r1b (ENSSTUG00000036065) #22 ENSSTUG00000036115 #23 ENSSTUG00000037229 PDK2 (ENSSTUG00000037271) TBKBP1 (ENSSTUG00000037653) tbx21 (ENSSTUG00000037670) osbpl7 (ENSSTUG00000037693) mrpl10 (ENSSTUG00000037910) pnpo (ENSSTUG00000037917) prr15lb (ENSSTUG00000037963) cdk5rap3 (ENSSTUG00000037968) NFE2L1 (ENSSTUG00000038035) ENSSTUG00000038049 SNX11 (ENSSTUG00000038070) skap1 (ENSSTUG00000038088) hoxb1b (ENSSTUG00000038136) Oncorhynchus ANCESTRAL SPECIES 26 ENSGT00950000183150.a.a.b.f ENSGT00950000183098.a.b.c ENSGT00390000016335.h.g ENSGT00940000166248.a.d ENSGT00940000161341.a.a.f ENSGT00940000162682.B.a.a ENSGT00390000014900.b.b.b.b.a ENSGT00940000154018.a.b ENSGT00940000158142.e ENSGT00940000155510.u.b ENSGT00940000157917.a.a.a.a ENSGT00950000183178.b.b.b.c.a ENSGT00940000157854.w.b ENSGT00530000064085.c.d ENSGT00530000063301.a.a.c.a.f #21 ENSGT00390000008812.b.b.a.a.b #22 ENSGT00940000157411.j #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c.c ENSGT00940000166447.c ENSGT00940000157439.b.d ENSGT00390000000603 ENSGT00390000011219.m.a ENSGT00940000154534.b.b.c ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.d ENSGT00940000154152.a.a.b ENSGT00940000160113.l ENSGT00390000017856.b.d ENSGT00940000159503 Oncorhynchus_a ANCESTRAL SPECIES 21 ENSGT00950000183150.a.a.b.f ENSGT00950000183098.a.b.c ENSGT00390000016335.h.g ENSGT00940000166248.a.d ENSGT00940000161341.a.a.f ENSGT00940000162682.B.a.a ENSGT00390000014900.b.b.b.b.a ENSGT00940000154018.a.b ENSGT00940000158142.e ENSGT00940000155510.u.b ENSGT00940000157917.a.a.a.a ENSGT00950000183178.b.b.b.c.a ENSGT00940000157854.w.b ENSGT00530000064085.c.d ENSGT00530000063301.a.a.c.a.f #21 ENSGT00390000008812.b.b.a.a.b #22 ENSGT00940000157411.j #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c.c ENSGT00940000166447.c ENSGT00940000157439.b.d ENSGT00390000000603 ENSGT00390000011219.m.a ENSGT00940000154534.b.b.c ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.d ENSGT00940000154152.a.a.b ENSGT00940000160113.l ENSGT00390000017856.b.d ENSGT00940000159503 Chinook salmon MODERN SPECIES 16 g6pc1a.2 (ENSOTSG00005038979) g6pc1a.1 (ENSOTSG00005038981) psme3 (ENSOTSG00005039008) nbr1a (ENSOTSG00005040069) tmem106a (ENSOTSG00005040070) arl4d (ENSOTSG00005040072) SOST (ENSOTSG00005040073) meox1 (ENSOTSG00005040076) etv4 (ENSOTSG00005040079) DHX8 (ENSOTSG00005040085) THRA (ENSOTSG00005040233) ormdl3 (ENSOTSG00005041562) wnt3 (ENSOTSG00005041563) nsfb (ENSOTSG00005041578) psmd11b (ENSOTSG00005043324) #21 cdk5r1b (ENSOTSG00005043357) #22 MYO1D (ENSOTSG00005043361) #23 PDK2 (ENSOTSG00005045506) TBKBP1 (ENSOTSG00005045541) GBP2 (ENSOTSG00005045542) wdfy2 (ENSOTSG00005045546) mab21l3 (ENSOTSG00005035115) ENSOTSG00005035116 ENSOTSG00005035117 ARSD (ENSOTSG00005035118) ENSOTSG00005035120 akap17a (ENSOTSG00005035121) ENSOTSG00005035123 ENSOTSG00005035124 ENSOTSG00005035125 tbx21 (ENSOTSG00005035126) Coho salmon MODERN SPECIES 12 nbr1a (ENSOKIG00005007605) tmem106a (ENSOKIG00005007624) arl4d (ENSOKIG00005007645) ENSOKIG00005007656 SOST (ENSOKIG00005007662) meox1 (ENSOKIG00005007673) etv4 (ENSOKIG00005007686) ENSOKIG00005007695 DHX8 (ENSOKIG00005007738) THRA (ENSOKIG00005008207) ENSOKIG00005008540 ormdl3 (ENSOKIG00005008553) wnt3 (ENSOKIG00005008567) nsfb (ENSOKIG00005008716) psmd11b (ENSOKIG00005010937) #21 cdk5r1b (ENSOKIG00005011007) #22 ENSOKIG00005011062 #23 PDK2 (ENSOKIG00005012119) TBKBP1 (ENSOKIG00005012307) tbx21 (ENSOKIG00005012316) osbpl7 (ENSOKIG00005012334) mrpl10 (ENSOKIG00005012380) pnpo (ENSOKIG00005012392) prr15lb (ENSOKIG00005012462) cdk5rap3 (ENSOKIG00005012472) NFE2L1 (ENSOKIG00005012519) ENSOKIG00005012530 SNX11 (ENSOKIG00005012548) skap1 (ENSOKIG00005012565) hoxb1b (ENSOKIG00005012579) ENSOKIG00005012606 Rainbow trout MODERN SPECIES 7 psme3 (ENSOMYG00000038921) nbr1a (ENSOMYG00000039260) tmem106a (ENSOMYG00000039279) arl4d (ENSOMYG00000039302) ENSOMYG00000039350 SOST (ENSOMYG00000075023) meox1 (ENSOMYG00000054849) etv4 (ENSOMYG00000039467) DHX8 (ENSOMYG00000040006) ENSOMYG00000064442 ENSOMYG00000041692 ormdl3 (ENSOMYG00000042161) wnt3 (ENSOMYG00000042177) nsfb (ENSOMYG00000042291) psmd11b (ENSOMYG00000042895) #21 cdk5r1b (ENSOMYG00000042908) #22 ENSOMYG00000042956 #23 ENSOMYG00000065805 ENSOMYG00000043223 ENSOMYG00000043255 TBKBP1 (ENSOMYG00000043446) tbx21 (ENSOMYG00000043454) osbpl7 (ENSOMYG00000043504) mrpl10 (ENSOMYG00000043590) pnpo (ENSOMYG00000043606) prr15lb (ENSOMYG00000043621) cdk5rap3 (ENSOMYG00000043627) ENSOMYG00000043634 NFE2L1 (ENSOMYG00000043639) ENSOMYG00000043649 SNX11 (ENSOMYG00000043658) Huchen MODERN SPECIES 15 ENSHHUG00000038269 psmd11b (ENSHHUG00000038586) #21 cdk5r1b (ENSHHUG00000038736) #22 ENSHHUG00000038746 #23 ENSHHUG00000038905 PDK2 (ENSHHUG00000038929) TBKBP1 (ENSHHUG00000039100) tbx21 (ENSHHUG00000039104) osbpl7 (ENSHHUG00000039118) mrpl10 (ENSHHUG00000039277) pnpo (ENSHHUG00000039280) prr15lb (ENSHHUG00000039309) cdk5rap3 (ENSHHUG00000039313) NFE2L1 (ENSHHUG00000039332) ENSHHUG00000039337 SNX11 (ENSHHUG00000039351) skap1 (ENSHHUG00000039362) hoxb1b (ENSHHUG00000039377) Northern pike MODERN SPECIES 4 g6pc1a.1 (ENSELUG00000007630) psme3 (ENSELUG00000000273) nbr1a (ENSELUG00000007695) tmem106a (ENSELUG00000007708) arl4d (ENSELUG00000007727) ENSELUG00000007740 SOST (ENSELUG00000000284) meox1 (ENSELUG00000030379) etv4 (ENSELUG00000007861) DHX8 (ENSELUG00000007955) THRA (ENSELUG00000008043) ormdl3 (ENSELUG00000008099) wnt3 (ENSELUG00000008126) nsfb (ENSELUG00000008162) psmd11b (ENSELUG00000008204) #21 cdk5r1b (ENSELUG00000008224) #22 MYO1D (ENSELUG00000008245) #23 ENSELUG00000008271 PDK2 (ENSELUG00000008326) TBKBP1 (ENSELUG00000008379) ENSELUG00000027949 tbx21 (ENSELUG00000001384) osbpl7 (ENSELUG00000008527) pnpo (ENSELUG00000008568) mrpl10 (ENSELUG00000008599) cdk5rap3 (ENSELUG00000008635) NFE2L1 (ENSELUG00000008672) ENSELUG00000000330 ENSELUG00000008701 skap1 (ENSELUG00000001494) ENSELUG00000008758 Protacanthopterygii ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b #22 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b.a #22 Salmo ANCESTRAL SPECIES 78 ENSGT00530000064671.d ENSGT00940000159396.f ENSGT00990000214316 ENSGT01030000235280 ENSGT00940000155267.y.b ENSGT00940000160374.q.a.a ENSGT00550000075088.a.a.e.b ENSGT00390000002866.a.h ENSGT00940000164729.a.b.c ENSGT00940000153561.b.a.b.a.b.a ENSGT00940000159110.a.j.a ENSGT00940000163157.a.a ENSGT00940000158125.a.g ENSGT00950000183213.a.a.b.c ENSGT00390000004566.f ENSGT00390000008812.b.b.a.b.a #22 ENSGT00940000154944.x ENSGT00390000006695.m ENSGT01030000234586.A.a.a.a.d ENSGT00390000016438.jb.a ENSGT00940000164208.c ENSGT00940000163149.a.a.b.c.b.b ENSGT00940000165576.a.b.f.a.a ENSGT00940000160643.j.a ENSGT00940000155348.B.d.d ENSGT00940000163600.o ENSGT00940000158951.e.c ENSGT00940000165079.a.b ENSGT00650000094974.b.c ENSGT00940000157744.d.e ENSGT00940000155111.vb.b River trout MODERN SPECIES 1 ENSSTUG00000011480 ENSSTUG00000011490 ENSSTUG00000011500 pdpk1b (ENSSTUG00000011522) KCTD5 (ENSSTUG00000011740) ENSSTUG00000011750 RNF40 (ENSSTUG00000011795) ENSSTUG00000012292 ENSSTUG00000012295 SHANK1 (ENSSTUG00000012304) SLC17A7 (ENSSTUG00000012367) slc6a16b (ENSSTUG00000013145) ENSSTUG00000013153 luc7l (ENSSTUG00000013161) ENSSTUG00000013180 cdk5r1b (ENSSTUG00000013293) #22 dcun1d3 (ENSSTUG00000013301) lyrm1 (ENSSTUG00000013308) ENSSTUG00000013320 med24 (ENSSTUG00000013342) ENSSTUG00000013592 ENSSTUG00000013596 ENSSTUG00000013606 ENSSTUG00000013658 mpp2b (ENSSTUG00000013668) ENSSTUG00000013957 dlx3b (ENSSTUG00000014516) dlx4b (ENSSTUG00000014526) kat7b (ENSSTUG00000002061) ENSSTUG00000004356 plekhm1 (ENSSTUG00000004373) Atlantic salmon MODERN SPECIES 10 ENSSSAG00000086106 ENSSSAG00000042015 ENSSSAG00000054472 ENSSSAG00000042879 ENSSSAG00000043048 ENSSSAG00000051349 ENSSSAG00000084683 ENSSSAG00000083553 ENSSSAG00000051354 ENSSSAG00000106070 ENSSSAG00000051442 ENSSSAG00000072237 ENSSSAG00000055104 ENSSSAG00000055128 ENSSSAG00000055144 ENSSSAG00000055169 #22 lyrm1 (ENSSSAG00000055177) ENSSSAG00000110482 ENSSSAG00000055207 ENSSSAG00000055333 ENSSSAG00000055336 ENSSSAG00000066193 ENSSSAG00000102730 ENSSSAG00000115984 ENSSSAG00000056126 dlx3b (ENSSSAG00000060327) dlx4b (ENSSSAG00000105630) KAT7 (ENSSSAG00000115485) ENSSSAG00000060862 ENSSSAG00000060911 mfsd13a (ENSSSAG00000060936) Huchen MODERN SPECIES 152 ENSHHUG00000046440 ENSHHUG00000046444 ENSHHUG00000046448 ENSHHUG00000046452 SLC17A7 (ENSHHUG00000046459) ENSHHUG00000046665 ENSHHUG00000046673 luc7l (ENSHHUG00000046675) KATNIP (ENSHHUG00000046676) ENSHHUG00000046786 #22 dcun1d3 (ENSHHUG00000046788) lyrm1 (ENSHHUG00000046793) ENSHHUG00000046803 med24 (ENSHHUG00000046812) ENSHHUG00000046951 ENSHHUG00000046955 ENSHHUG00000046984 mki67 (ENSHHUG00000047117) ENSHHUG00000047129 MPP2 (ENSHHUG00000047134) ENSHHUG00000047302 ENSHHUG00000047349 ENSHHUG00000047352 Salmoninae ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b.b #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b.b #22 Salmo ANCESTRAL SPECIES ENSGT00390000008812.b.b.a.b.b #22 Atlantic salmon DUPLICATION Atlantic salmon DUPLICATION Atlantic salmon DUPLICATION Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 22 ENSSSAG00000073246 ENSSSAG00000100489 gad1b (ENSSSAG00000109931) gorasp2 (ENSSSAG00000073061) tlk1b (ENSSSAG00000072879) DYNC1I2 (ENSSSAG00000071527) slc25a12 (ENSSSAG00000067281) metap1d (ENSSSAG00000067171) dlx2b (ENSSSAG00000110714) ENSSSAG00000084628 itga6b (ENSSSAG00000066104) ENSSSAG00000098169 ENSSSAG00000086109 ENSSSAG00000065089 ENSSSAG00000064930 ENSSSAG00000099576 #22 ENSSSAG00000017324 #22 ENSSSAG00000118064 #22 ENSSSAG00000108828 ENSSSAG00000051667 ENSSSAG00000116694 ENSSSAG00000051405 ENSSSAG00000051350 ENSSSAG00000048232 ENSSSAG00000042360 ENSSSAG00000092790 ENSSSAG00000042058 ENSSSAG00000110036 ENSSSAG00000102393 SUGT1 (ENSSSAG00000041917) lect1 (ENSSSAG00000041909) Atlantic salmon MODERN SPECIES 22 ENSSSAG00000100489 gad1b (ENSSSAG00000109931) gorasp2 (ENSSSAG00000073061) tlk1b (ENSSSAG00000072879) DYNC1I2 (ENSSSAG00000071527) slc25a12 (ENSSSAG00000067281) metap1d (ENSSSAG00000067171) dlx2b (ENSSSAG00000110714) ENSSSAG00000084628 itga6b (ENSSSAG00000066104) ENSSSAG00000098169 ENSSSAG00000086109 ENSSSAG00000065089 ENSSSAG00000064930 ENSSSAG00000099576 #22 ENSSSAG00000017324 #22 ENSSSAG00000118064 #22 ENSSSAG00000108828 ENSSSAG00000051667 ENSSSAG00000116694 ENSSSAG00000051405 ENSSSAG00000051350 ENSSSAG00000048232 ENSSSAG00000042360 ENSSSAG00000092790 ENSSSAG00000042058 ENSSSAG00000110036 ENSSSAG00000102393 SUGT1 (ENSSSAG00000041917) lect1 (ENSSSAG00000041909) PCDH8 (ENSSSAG00000041902) Atlantic salmon MODERN SPECIES 22 ENSSSAG00000110838 ENSSSAG00000041857 ENSSSAG00000041831 ENSSSAG00000094775 ENSSSAG00000041624 ENSSSAG00000111204 ENSSSAG00000118192 ENSSSAG00000039471 ENSSSAG00000039329 rem2 (ENSSSAG00000049275) ENSSSAG00000039292 carmil3 (ENSSSAG00000037707) ENSSSAG00000037434 psmb5 (ENSSSAG00000071636) ENSSSAG00000071634 #22 ENSSSAG00000064913 #22 ENSSSAG00000071632 prmt5 (ENSSSAG00000071581) ENSSSAG00000071560 ap1g2 (ENSSSAG00000067945) ENSSSAG00000067816 zp3f.1 (ENSSSAG00000067805) homeza (ENSSSAG00000067787) ENSSSAG00000105028 dhrs1 (ENSSSAG00000067779) ENSSSAG00000120731 ENSSSAG00000086736 ENSSSAG00000120516 mmp14b (ENSSSAG00000067758) ENSSSAG00000067752 ENSSSAG00000067750 Atlantic salmon MODERN SPECIES 22 gad1b (ENSSSAG00000109931) gorasp2 (ENSSSAG00000073061) tlk1b (ENSSSAG00000072879) DYNC1I2 (ENSSSAG00000071527) slc25a12 (ENSSSAG00000067281) metap1d (ENSSSAG00000067171) dlx2b (ENSSSAG00000110714) ENSSSAG00000084628 itga6b (ENSSSAG00000066104) ENSSSAG00000098169 ENSSSAG00000086109 ENSSSAG00000065089 ENSSSAG00000064930 ENSSSAG00000099576 #22 ENSSSAG00000017324 #22 ENSSSAG00000118064 #22 ENSSSAG00000108828 ENSSSAG00000051667 ENSSSAG00000116694 ENSSSAG00000051405 ENSSSAG00000051350 ENSSSAG00000048232 ENSSSAG00000042360 ENSSSAG00000092790 ENSSSAG00000042058 ENSSSAG00000110036 ENSSSAG00000102393 SUGT1 (ENSSSAG00000041917) lect1 (ENSSSAG00000041909) PCDH8 (ENSSSAG00000041902) ENSSSAG00000041897 Atlantic salmon MODERN SPECIES 22 ENSSSAG00000041881 ENSSSAG00000110838 ENSSSAG00000041857 ENSSSAG00000041831 ENSSSAG00000094775 ENSSSAG00000041624 ENSSSAG00000111204 ENSSSAG00000118192 ENSSSAG00000039471 ENSSSAG00000039329 rem2 (ENSSSAG00000049275) ENSSSAG00000039292 carmil3 (ENSSSAG00000037707) ENSSSAG00000037434 psmb5 (ENSSSAG00000071636) ENSSSAG00000071634 #22 ENSSSAG00000064913 #22 ENSSSAG00000071632 prmt5 (ENSSSAG00000071581) ENSSSAG00000071560 ap1g2 (ENSSSAG00000067945) ENSSSAG00000067816 zp3f.1 (ENSSSAG00000067805) homeza (ENSSSAG00000067787) ENSSSAG00000105028 dhrs1 (ENSSSAG00000067779) ENSSSAG00000120731 ENSSSAG00000086736 ENSSSAG00000120516 mmp14b (ENSSSAG00000067758) ENSSSAG00000067752 River trout MODERN SPECIES 24 ENSSTUG00000031843 ENSSTUG00000031874 C2CD4C (ENSSTUG00000031878) gad1b (ENSSTUG00000031948) gorasp2 (ENSSTUG00000035509) tlk1b (ENSSTUG00000035554) DYNC1I2 (ENSSTUG00000036552) slc25a12 (ENSSTUG00000036726) metap1d (ENSSTUG00000037725) dlx2b (ENSSTUG00000037760) itga6b (ENSSTUG00000037802) ENSSTUG00000038525 rapgef4b (ENSSTUG00000038615) ENSSTUG00000039916 ENSSTUG00000040151 ENSSTUG00000040177 #22 ENSSTUG00000040199 ENSSTUG00000040226 epha4b (ENSSTUG00000040275) ENSSTUG00000041667 ENSSTUG00000041693 ENSSTUG00000041703 ENSSTUG00000003258 ENSSTUG00000003464 EPHA4 (ENSSTUG00000003673) ENSSTUG00000004101 ENSSTUG00000006323 ENSSTUG00000006329 ednrba (ENSSTUG00000006342) ENSSTUG00000006378 sugt1 (ENSSTUG00000006391) Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00940000161210.k ENSGT00940000154716.hc.e.a ENSGT00940000161259.B.b.h ENSGT00940000155526.i.b.b.a ENSGT00940000155526.i.b.b.b.a.b ENSGT00390000008686.d.a.g ENSGT00950000182984.b.a.b.f.a ENSGT00940000155442.o.c ENSGT00940000155963.e.h.b ENSGT00940000157735.d ENSGT00940000160127.i.b ENSGT00940000155353.a.a.b.e.a ENSGT00940000164127.b.c ENSGT00940000156075.a.b.e ENSGT00940000161352.f.b.d ENSGT00390000008812.b.b.a.b.b #22 ENSGT00940000165265.f.a ENSGT01000000215891.b ENSGT00980000200268.a ENSGT00990000205697.a ENSGT01030000235105.c ENSGT00940000156948.i.a.c ENSGT00940000159258.c.c ENSGT00400000022326.b.a.b.b.b ENSGT01100000263512.a.a.a.b.a.a.b ENSGT00940000157039.b.c ENSGT00390000013700.bb ENSGT00480000042679.b.b.e ENSGT00940000155219.hb.a.c ENSGT00390000006290 ENSGT00940000164225.e.b Rainbow trout MODERN SPECIES 20 ENSOMYG00000028921 ENSOMYG00000033055 ENSOMYG00000033196 ENSOMYG00000033342 gad1b (ENSOMYG00000033434) gorasp2 (ENSOMYG00000033624) tlk1b (ENSOMYG00000033688) DYNC1I2 (ENSOMYG00000033966) slc25a12 (ENSOMYG00000038053) metap1d (ENSOMYG00000039319) ENSOMYG00000072272 itga6b (ENSOMYG00000039830) ENSOMYG00000077805 ENSOMYG00000040659 ENSOMYG00000040923 ENSOMYG00000030913 #22 ENSOMYG00000062537 ENSOMYG00000041407 ENSOMYG00000041410 ENSOMYG00000065691 ENSOMYG00000041418 ENSOMYG00000041448 ENSOMYG00000041494 ENSOMYG00000041832 ENSOMYG00000041843 ENSOMYG00000041847 SUGT1 (ENSOMYG00000041852) ENSOMYG00000041862 PCDH8 (ENSOMYG00000041865) ENSOMYG00000069266 ENSOMYG00000047891 Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00940000165115.b.a ENSGT00940000153617.A.a.b.i ENSGT00940000161210.k ENSGT00940000154716.hc.e.a ENSGT00940000155526.i.b.b.b.a.b ENSGT00390000008686.d.a.g ENSGT00950000182984.b.a.b.f.a ENSGT00940000155442.o.c ENSGT00940000155963.e.h.b ENSGT00940000157735.d ENSGT00940000160127.i.b ENSGT00940000155353.a.a.b.e.a ENSGT00940000164127.b.c ENSGT00940000156075.a.b.e ENSGT00940000161352.f.b.d ENSGT00390000008812.b.b.a.b.b #22 ENSGT00940000165265.f.a ENSGT01000000215891.b ENSGT00980000200268.a ENSGT00990000205697.a ENSGT01030000235105.c ENSGT00940000156948.i.a.c ENSGT00940000159258.c.c ENSGT00400000022326.b.a.b.b.b ENSGT01100000263512.a.a.a.b.a.a.b ENSGT00940000157039.b.c ENSGT00390000013700.bb ENSGT00480000042679.b.b.e ENSGT00940000155219.hb.a.c ENSGT00390000006290 ENSGT00940000164225.e.b Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 20 ENSOTSG00005035945 PTPRS (ENSOTSG00005036019) FEM1A (ENSOTSG00005046805) ENSOTSG00005046816 gad1b (ENSOTSG00005046840) gorasp2 (ENSOTSG00005046845) tlk1b (ENSOTSG00005046846) DYNC1I2 (ENSOTSG00005046882) slc25a12 (ENSOTSG00005046955) metap1d (ENSOTSG00005046975) dlx2b (ENSOTSG00005046976) itga6b (ENSOTSG00005046977) ENSOTSG00005046985 rapgef4b (ENSOTSG00005046996) ENSOTSG00005047333 ENSOTSG00005047334 #22 ENSOTSG00005047337 BTBD2 (ENSOTSG00005047339) ENSOTSG00005047344 ENSOTSG00005047346 sirt6 (ENSOTSG00005047347) ENSOTSG00005047363 cactin (ENSOTSG00005047364) stap2a (ENSOTSG00005047369) sh3gl1a (ENSOTSG00005047370) rorcb (ENSOTSG00005047372) ENSOTSG00005047374 SEMA6B (ENSOTSG00005047375) ABHD17A (ENSOTSG00005047379) ENSOTSG00005047381 PTPRS (ENSOTSG00005047393) Chinook salmon MODERN SPECIES 20 ENSOTSG00005047381 PTPRS (ENSOTSG00005047393) FEM1A (ENSOTSG00005047800) ENSOTSG00005047801 gad1b (ENSOTSG00005047803) gorasp2 (ENSOTSG00005047804) tlk1b (ENSOTSG00005047805) DYNC1I2 (ENSOTSG00005047811) slc25a12 (ENSOTSG00005047813) metap1d (ENSOTSG00005047814) dlx2b (ENSOTSG00005047815) itga6b (ENSOTSG00005047816) ENSOTSG00005047819 rapgef4b (ENSOTSG00005047821) ENSOTSG00005047856 ENSOTSG00005047858 #22 dnajb11 (ENSOTSG00005047859) tbccd1 (ENSOTSG00005047861) epha4b (ENSOTSG00005047862) ENSOTSG00005047864 ENSOTSG00005047866 ENSOTSG00005047867 ENSOTSG00005047869 EPHA4 (ENSOTSG00005047874) pxylp1 (ENSOTSG00005047879) ENSOTSG00005047880 ENSOTSG00005047883 ednrba (ENSOTSG00005047885) ENSOTSG00005047888 sugt1 (ENSOTSG00005047889) CNMD (ENSOTSG00005047890) Coho salmon MODERN SPECIES 19 FEM1A (ENSOKIG00005049162) ENSOKIG00005049164 C2CD4C (ENSOKIG00005049172) ENSOKIG00005049178 gad1b (ENSOKIG00005049323) gorasp2 (ENSOKIG00005049884) tlk1b (ENSOKIG00005049899) DYNC1I2 (ENSOKIG00005049944) slc25a12 (ENSOKIG00005050107) metap1d (ENSOKIG00005050282) dlx2b (ENSOKIG00005050309) itga6b (ENSOKIG00005050343) ENSOKIG00005050432 rapgef4b (ENSOKIG00005050487) ENSOKIG00005050573 CDK5R1 (ENSOKIG00005050640) #22 epha4b (ENSOKIG00005050646) ENSOKIG00005050653 ENSOKIG00005050656 ENSOKIG00005050657 ENSOKIG00005050658 EPHA4 (ENSOKIG00005050663) ENSOKIG00005050676 ENSOKIG00005050703 EDNRB (ENSOKIG00005050709) ENSOKIG00005050711 sugt1 (ENSOKIG00005050715) CNMD (ENSOKIG00005050718) PCDH8 (ENSOKIG00005050720) CXorf38 (ENSOKIG00005050723) ENSOKIG00005050725 Huchen DUPLICATION Huchen MODERN SPECIES 284 FEM1A (ENSHHUG00000037913) ENSHHUG00000037916 C2CD4C (ENSHHUG00000038222) ENSHHUG00000038248 gorasp2 (ENSHHUG00000038594) tlk1b (ENSHHUG00000038656) DYNC1I2 (ENSHHUG00000039064) slc25a12 (ENSHHUG00000039997) metap1d (ENSHHUG00000040221) dlx2b (ENSHHUG00000040229) itga6b (ENSHHUG00000040247) ENSHHUG00000040554 rapgef4b (ENSHHUG00000040586) ENSHHUG00000040763 ENSHHUG00000040801 cdk5r1b (ENSHHUG00000040811) #22 Huchen MODERN SPECIES 4308 cdk5r1b (ENSHHUG00000049312) #22 ENSHHUG00000049308 ENSHHUG00000049301 Acanthomorphata ANCESTRAL SPECIES 12 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Cod MODERN SPECIES 94 ENSGMOG00000019220 ENSGMOG00000019234 #21 ENSGMOG00000033441 #22 Euacanthomorphacea ANCESTRAL SPECIES 21 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Pinecone sodierfish MODERN SPECIES 10 g6pc1a.1 (ENSMMDG00005017428) psme3 (ENSMMDG00005017276) nbr1a (ENSMMDG00005017271) tmem106a (ENSMMDG00005017269) arl4d (ENSMMDG00005017268) ENSMMDG00005017266 SOST (ENSMMDG00005017264) meox1 (ENSMMDG00005017259) etv4 (ENSMMDG00005017257) DHX8 (ENSMMDG00005016578) THRA (ENSMMDG00005013831) ormdl3 (ENSMMDG00005013793) wnt3 (ENSMMDG00005013783) nsfb (ENSMMDG00005010010) psmd11b (ENSMMDG00005009924) #21 cdk5r1b (ENSMMDG00005009918) #22 MYO1D (ENSMMDG00005006560) #23 ENSMMDG00005006517 PDK2 (ENSMMDG00005005899) ENSMMDG00005005852 tbx21 (ENSMMDG00005005843) osbpl7 (ENSMMDG00005005835) mrpl10 (ENSMMDG00005005826) pnpo (ENSMMDG00005005812) prr15lb (ENSMMDG00005005803) cdk5rap3 (ENSMMDG00005005179) NFE2L1 (ENSMMDG00005005166) CBX1 (ENSMMDG00005005163) ENSMMDG00005005159 skap1 (ENSMMDG00005005155) hoxb1b (ENSMMDG00005005153) Percomorphaceae ANCESTRAL SPECIES 21 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Tiger tail seahorse MODERN SPECIES 435 mta3 (ENSHCOG00000016374) KCNG3 (ENSHCOG00000016325) cox7a2l (ENSHCOG00000016293) cript (ENSHCOG00000016281) pigf (ENSHCOG00000016260) gch2 (ENSHCOG00000016251) msh2 (ENSHCOG00000016233) ENSHCOG00000016197 DHX8 (ENSHCOG00000016177) ENSHCOG00000016125 ENSHCOG00000016111 ormdl3 (ENSHCOG00000016104) wnt3 (ENSHCOG00000016086) nsfb (ENSHCOG00000016071) psmd11b (ENSHCOG00000016049) #21 cdk5r1b (ENSHCOG00000016046) #22 MYO1D (ENSHCOG00000016034) #23 PDK2 (ENSHCOG00000015994) TBKBP1 (ENSHCOG00000015975) tbx21 (ENSHCOG00000015961) osbpl7 (ENSHCOG00000015840) mrpl10 (ENSHCOG00000015812) pnpo (ENSHCOG00000015796) GCGR (ENSHCOG00000015787) WDR90 (ENSHCOG00000015717) rhot2 (ENSHCOG00000015642) h1-0 (ENSHCOG00000000434) rhbdl1 (ENSHCOG00000015572) zgc:112496 (ENSHCOG00000015559) wdr24 (ENSHCOG00000015542) anks3 (ENSHCOG00000015518) Percomorphaceae_B ANCESTRAL SPECIES 23 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Percomorphaceae_C ANCESTRAL SPECIES 14 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Percomorphaceae_D ANCESTRAL SPECIES 13 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Carangaria ANCESTRAL SPECIES 13 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Carangaria_A ANCESTRAL SPECIES 5 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Seriola ANCESTRAL SPECIES 1 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000159842.pc.a.a.b.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Yellowtail amberjack MODERN SPECIES 2745 etv4 (ENSSLDG00000023235) ENSSLDG00000023277 DHX8 (ENSSLDG00000023594) ENSSLDG00000023623 ormdl3 (ENSSLDG00000023647) wnt3 (ENSSLDG00000023653) nsfb (ENSSLDG00000023659) psmd11b (ENSSLDG00000023708) #21 cdk5r1b (ENSSLDG00000023731) #22 MYO1D (ENSSLDG00000023744) #23 PDK2 (ENSSLDG00000023784) mibp2 (ENSSLDG00000023804) TBKBP1 (ENSSLDG00000023814) tbx21 (ENSSLDG00000023842) osbpl7 (ENSSLDG00000023859) mrpl10 (ENSSLDG00000023900) pnpo (ENSSLDG00000023906) prr15lb (ENSSLDG00000023922) cdk5rap3 (ENSSLDG00000023933) NFE2L1 (ENSSLDG00000023957) CBX1 (ENSSLDG00000023975) ENSSLDG00000023984 skap1 (ENSSLDG00000023996) ENSSLDG00000024036 Greater amberjack MODERN SPECIES 27 psme3 (ENSSDUG00000011048) nbr1a (ENSSDUG00000010995) tmem106a (ENSSDUG00000010957) arl4d (ENSSDUG00000010935) ENSSDUG00000010917 SOST (ENSSDUG00000010910) meox1 (ENSSDUG00000010898) etv4 (ENSSDUG00000010855) ENSSDUG00000010822 DHX8 (ENSSDUG00000010774) ENSSDUG00000010747 ormdl3 (ENSSDUG00000010734) wnt3 (ENSSDUG00000010720) nsfb (ENSSDUG00000010622) psmd11b (ENSSDUG00000010564) #21 cdk5r1b (ENSSDUG00000010547) #22 MYO1D (ENSSDUG00000010486) #23 PDK2 (ENSSDUG00000010444) ENSSDUG00000010427 TBKBP1 (ENSSDUG00000010348) tbx21 (ENSSDUG00000010318) osbpl7 (ENSSDUG00000010251) mrpl10 (ENSSDUG00000010218) pnpo (ENSSDUG00000010163) prr15lb (ENSSDUG00000010143) cdk5rap3 (ENSSDUG00000010099) NFE2L1 (ENSSDUG00000010077) CBX1 (ENSSDUG00000009538) ENSSDUG00000009484 skap1 (ENSSDUG00000009365) hoxb1b (ENSSDUG00000009350) Barramundi perch MODERN SPECIES 143 ormdl3 (ENSLCAG00010013074) wnt3 (ENSLCAG00010013080) nsfb (ENSLCAG00010013227) psmd11b (ENSLCAG00010013998) #21 cdk5r1b (ENSLCAG00010014014) #22 MYO1D (ENSLCAG00010014023) #23 ENSLCAG00010014039 PDK2 (ENSLCAG00010014074) ENSLCAG00010014321 tbx21 (ENSLCAG00010014324) osbpl7 (ENSLCAG00010014350) mrpl10 (ENSLCAG00010014459) pnpo (ENSLCAG00010014463) prr15lb (ENSLCAG00010014473) cdk5rap3 (ENSLCAG00010014478) NFE2L1 (ENSLCAG00010014488) CBX1 (ENSLCAG00010014494) ENSLCAG00010014509 skap1 (ENSLCAG00010014518) hoxb1b (ENSLCAG00010014523) Pleuronectoidei ANCESTRAL SPECIES 6 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Turbot MODERN SPECIES 9 PPP1R9B (ENSSMAG00000022444) ENSSMAG00000008308 nbr1a (ENSSMAG00000008345) tmem106a (ENSSMAG00000008371) arl4d (ENSSMAG00000008394) ENSSMAG00000008410 SOST (ENSSMAG00000008429) meox1 (ENSSMAG00000035663) etv4 (ENSSMAG00000008436) DHX8 (ENSSMAG00000008607) ENSSMAG00000008835 ormdl3 (ENSSMAG00000030550) ENSSMAG00000008939 nsfb (ENSSMAG00000008968) psmd11b (ENSSMAG00000009060) #21 cdk5r1b (ENSSMAG00000009091) #22 ENSSMAG00000009096 #23 ENSSMAG00000035920 ENSSMAG00000009144 ENSSMAG00000034152 ENSSMAG00000009151 TBKBP1 (ENSSMAG00000009169) tbx21 (ENSSMAG00000009189) osbpl7 (ENSSMAG00000009287) mrpl10 (ENSSMAG00000009358) pnpo (ENSSMAG00000009382) prr15lb (ENSSMAG00000009371) cdk5rap3 (ENSSMAG00000009389) NFE2L1 (ENSSMAG00000009430) CBX1 (ENSSMAG00000009453) ENSSMAG00000009467 Tongue sole MODERN SPECIES 18 g6pc1a.2 (ENSCSEG00000015324) g6pc1a.1 (ENSCSEG00000015317) psme3 (ENSCSEG00000015299) nbr1a (ENSCSEG00000015239) tmem106a (ENSCSEG00000015221) ENSCSEG00000015196 SOST (ENSCSEG00000015193) meox1 (ENSCSEG00000015167) etv4 (ENSCSEG00000015152) DHX8 (ENSCSEG00000015029) ENSCSEG00000014988 ormdl3 (ENSCSEG00000014961) wnt3 (ENSCSEG00000014940) nsfb (ENSCSEG00000014912) psmd11b (ENSCSEG00000014884) #21 cdk5r1b (ENSCSEG00000014872) #22 MYO1D (ENSCSEG00000014827) #23 PDK2 (ENSCSEG00000014796) TBKBP1 (ENSCSEG00000014783) tbx21 (ENSCSEG00000014775) osbpl7 (ENSCSEG00000014747) mrpl10 (ENSCSEG00000014726) pnpo (ENSCSEG00000014722) prr15lb (ENSCSEG00000014716) cdk5rap3 (ENSCSEG00000014710) NFE2L1 (ENSCSEG00000014705) CBX1 (ENSCSEG00000014701) ENSCSEG00000014692 ENSCSEG00000014685 skap1 (ENSCSEG00000014680) hoxb1b (ENSCSEG00000014673) Anabantaria ANCESTRAL SPECIES 18 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Zig-zag eel MODERN SPECIES 10 ENSMAMG00000005894 psme3 (ENSMAMG00000025815) nbr1a (ENSMAMG00000005959) tmem106a (ENSMAMG00000005987) arl4d (ENSMAMG00000006033) ENSMAMG00000006064 SOST (ENSMAMG00000006089) meox1 (ENSMAMG00000026178) etv4 (ENSMAMG00000006127) DHX8 (ENSMAMG00000006195) ENSMAMG00000006296 ormdl3 (ENSMAMG00000025248) ENSMAMG00000006359 nsfb (ENSMAMG00000006372) psmd11b (ENSMAMG00000006403) #21 cdk5r1b (ENSMAMG00000006430) #22 ENSMAMG00000006436 #23 ENSMAMG00000006476 TBKBP1 (ENSMAMG00000027920) tbx21 (ENSMAMG00000024359) osbpl7 (ENSMAMG00000006572) mrpl10 (ENSMAMG00000028052) pnpo (ENSMAMG00000006642) prr15lb (ENSMAMG00000006652) cdk5rap3 (ENSMAMG00000006672) NFE2L1 (ENSMAMG00000006690) CBX1 (ENSMAMG00000006734) ENSMAMG00000026591 skap1 (ENSMAMG00000006775) hoxb1b (ENSMAMG00000006840) ENSMAMG00000006846 Anabantoidei ANCESTRAL SPECIES 10 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Siamese fighting fish MODERN SPECIES 9 g6pc1a.2 (ENSBSLG00000014043) ENSBSLG00000014125 nbr1a (ENSBSLG00000014140) tmem106a (ENSBSLG00000014181) ENSBSLG00000014204 ENSBSLG00000014215 ENSBSLG00000014265 SOST (ENSBSLG00000014728) meox1 (ENSBSLG00000014735) etv4 (ENSBSLG00000014750) DHX8 (ENSBSLG00000014811) ormdl3 (ENSBSLG00000015492) wnt3 (ENSBSLG00000015504) nsfb (ENSBSLG00000015626) psmd11b (ENSBSLG00000016762) #21 cdk5r1b (ENSBSLG00000017180) #22 MYO1D (ENSBSLG00000017279) #23 TBKBP1 (ENSBSLG00000019065) tbx21 (ENSBSLG00000019081) osbpl7 (ENSBSLG00000019101) mrpl10 (ENSBSLG00000019251) pnpo (ENSBSLG00000019268) prr15lb (ENSBSLG00000019277) cdk5rap3 (ENSBSLG00000019290) NFE2L1 (ENSBSLG00000019484) CBX1 (ENSBSLG00000019498) SNX11 (ENSBSLG00000019527) skap1 (ENSBSLG00000019797) ENSBSLG00000019868 ENSBSLG00000019883 hoxb5b (ENSBSLG00000019889) Climbing perch MODERN SPECIES 10 ENSATEG00000007358 psme3 (ENSATEG00000007386) nbr1a (ENSATEG00000007424) tmem106a (ENSATEG00000007432) arl4d (ENSATEG00000026533) ENSATEG00000007522 SOST (ENSATEG00000007558) meox1 (ENSATEG00000026435) etv4 (ENSATEG00000007590) DHX8 (ENSATEG00000007660) ENSATEG00000007751 ormdl3 (ENSATEG00000026887) ENSATEG00000007808 nsfb (ENSATEG00000007835) psmd11b (ENSATEG00000007920) #21 cdk5r1b (ENSATEG00000007987) #22 ENSATEG00000008024 #23 ENSATEG00000008138 TBKBP1 (ENSATEG00000008182) tbx21 (ENSATEG00000026567) osbpl7 (ENSATEG00000008218) mrpl10 (ENSATEG00000008279) pnpo (ENSATEG00000008296) prr15lb (ENSATEG00000008355) cdk5rap3 (ENSATEG00000008382) NFE2L1 (ENSATEG00000008441) CBX1 (ENSATEG00000027720) ENSATEG00000028495 skap1 (ENSATEG00000008510) hoxb1b (ENSATEG00000008518) hoxb5b (ENSATEG00000008526) Eupercaria ANCESTRAL SPECIES 10 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Tetraodontidae ANCESTRAL SPECIES 23 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510.g.b ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Tetraodon MODERN SPECIES 13 pnpo (ENSTNIG00000010100) mrpl10 (ENSTNIG00000010101) osbpl7 (ENSTNIG00000010102) tbx21 (ENSTNIG00000010103) TBKBP1 (ENSTNIG00000016965) PDK2 (ENSTNIG00000016966) ENSTNIG00000016967 ENSTNIG00000019512 #23 MYO1D (ENSTNIG00000019513) #23 psmd11b (ENSTNIG00000006061) #21 nsfb (ENSTNIG00000006062) wnt3 (ENSTNIG00000006063) ENSTNIG00000003353 ENSTNIG00000006979 psmd11b (ENSTNIG00000004136) #21 cdk5r1b (ENSTNIG00000004135) #22 etv4 (ENSTNIG00000004134) meox1 (ENSTNIG00000014406) SOST (ENSTNIG00000014407) ENSTNIG00000014408 tmem106a (ENSTNIG00000014409) nbr1a (ENSTNIG00000014410) psme3 (ENSTNIG00000014411) g6pc1a.1 (ENSTNIG00000014412) g6pc1a.2 (ENSTNIG00000014413) ENSTNIG00000014414 MFAP4 (ENSTNIG00000001172) acsl5 (ENSTNIG00000014415) ENSTNIG00000014416 tectb (ENSTNIG00000014417) plxdc1 (ENSTNIG00000000704) Fugu MODERN SPECIES g6pc (ENSTRUG00000006732) g6pc1a.1 (ENSTRUG00000006412) psme3 (ENSTRUG00000006170) nbr1a (ENSTRUG00000024001) tmem106a (ENSTRUG00000005530) arl4d (ENSTRUG00000020118) ENSTRUG00000005294 ENSTRUG00000003867 meox1 (ENSTRUG00000005193) etv4 (ENSTRUG00000004727) ENSTRUG00000004063 ormdl3 (ENSTRUG00000033478) nsfb (ENSTRUG00000002989) wnt3 (ENSTRUG00000003564) psmd11b (ENSTRUG00000002031) #21 cdk5r1b (ENSTRUG00000001984) #22 MYO1D (ENSTRUG00000013296) #23 ENSTRUG00000013295 PDK2 (ENSTRUG00000013086) TBKBP1 (ENSTRUG00000013045) tbx21 (ENSTRUG00000012995) osbpl7 (ENSTRUG00000012593) Mrpl10 (ENSTRUG00000020176) pnpo (ENSTRUG00000012477) prr15lb (ENSTRUG00000012473) cdk5rap3 (ENSTRUG00000012311) NFE2L1 (ENSTRUG00000012259) ENSTRUG00000012171 CBX1 (ENSTRUG00000012203) skap1 (ENSTRUG00000026027) ENSTRUG00000012061 Eupecaria_A ANCESTRAL SPECIES 22 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 229 nbr1a (ENSLBEG00000010972) ENSLBEG00000011111 tmem106a (ENSLBEG00000011127) arl4d (ENSLBEG00000011152) ENSLBEG00000011201 SOST (ENSLBEG00000011225) meox1 (ENSLBEG00000011244) etv4 (ENSLBEG00000011272) ENSLBEG00000011490 DHX8 (ENSLBEG00000012048) ENSLBEG00000012113 ormdl3 (ENSLBEG00000012141) wnt3 (ENSLBEG00000012155) nsfb (ENSLBEG00000012216) psmd11b (ENSLBEG00000012351) #21 cdk5r1b (ENSLBEG00000012401) #22 MYO1D (ENSLBEG00000012431) #23 Ballan wrasse MODERN SPECIES 4308 ENSLBEG00000014308 cdk5r1b (ENSLBEG00000014346) #22 Eupecaria_B ANCESTRAL SPECIES 22 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Eupecaria_C ANCESTRAL SPECIES 23 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 27 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a European seabass MODERN SPECIES 11 ENSDLAG00005031549 psme3 (ENSDLAG00005020891) nbr1a (ENSDLAG00005020930) tmem106a (ENSDLAG00005020957) arl4d (ENSDLAG00005031914) ENSDLAG00005033736 SOST (ENSDLAG00005033789) meox1 (ENSDLAG00005020975) etv4 (ENSDLAG00005020978) DHX8 (ENSDLAG00005021007) ENSDLAG00005021583 ORMDL3 (ENSDLAG00005028232) ENSDLAG00005022067 nsfb (ENSDLAG00005022119) psmd11b (ENSDLAG00005023007) #21 cdk5r1b (ENSDLAG00005033472) #22 ENSDLAG00005023075 #23 PDK2 (ENSDLAG00005023763) TBKBP1 (ENSDLAG00005023823) tbx21 (ENSDLAG00005028790) osbpl7 (ENSDLAG00005023883) mrpl10 (ENSDLAG00005024317) PNPO (ENSDLAG00005028589) prr15lb (ENSDLAG00005024323) cdk5rap3 (ENSDLAG00005024327) NFE2L1 (ENSDLAG00005024374) CBX1 (ENSDLAG00005032953) ENSDLAG00005024382 skap1 (ENSDLAG00005024386) HOXB1B (ENSDLAG00005027264) hoxb5b (ENSDLAG00005024397) Large yellow croaker MODERN SPECIES 488 ENSLCRG00005019677 ENSLCRG00005019678 ENSLCRG00005019679 ENSLCRG00005019680 ENSLCRG00005019681 ENSLCRG00005019683 SOST (ENSLCRG00005019685) meox1 (ENSLCRG00005019689) etv4 (ENSLCRG00005019691) DHX8 (ENSLCRG00005019699) ENSLCRG00005019915 ormdl3 (ENSLCRG00005019976) wnt3 (ENSLCRG00005019977) nsfb (ENSLCRG00005019982) psmd11b (ENSLCRG00005020186) #21 cdk5r1b (ENSLCRG00005020192) #22 MYO1D (ENSLCRG00005020222) #23 PDK2 (ENSLCRG00005021308) TBKBP1 (ENSLCRG00005021562) tbx21 (ENSLCRG00005021564) osbpl7 (ENSLCRG00005021566) mrpl10 (ENSLCRG00005021573) pnpo (ENSLCRG00005021575) prr15lb (ENSLCRG00005021577) cdk5rap3 (ENSLCRG00005021579) ENSLCRG00005021596 NFE2L1 (ENSLCRG00005021600) CBX1 (ENSLCRG00005021602) ENSLCRG00005021604 skap1 (ENSLCRG00005021605) ENSLCRG00005021608 Perciformes ANCESTRAL SPECIES 9 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Cottioidei ANCESTRAL SPECIES 12 ENSGT01100000263491.a.a.d ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Lumpfish MODERN SPECIES 10 g6pc1a.2 (ENSCLMG00005022609) g6pc1a.1 (ENSCLMG00005022610) psme3 (ENSCLMG00005022614) nbr1a (ENSCLMG00005022618) tmem106a (ENSCLMG00005022623) arl4d (ENSCLMG00005022626) DUSP3 (ENSCLMG00005022628) SOST (ENSCLMG00005022630) meox1 (ENSCLMG00005022631) DHX8 (ENSCLMG00005022652) ENSCLMG00005022848 ormdl3 (ENSCLMG00005022850) wnt3 (ENSCLMG00005022851) nsfb (ENSCLMG00005022864) psmd11b (ENSCLMG00005022930) #21 cdk5r1b (ENSCLMG00005022932) #22 MYO1D (ENSCLMG00005022935) #23 PDK2 (ENSCLMG00005022960) tbx21 (ENSCLMG00005022975) osbpl7 (ENSCLMG00005022976) mrpl10 (ENSCLMG00005022979) pnpo (ENSCLMG00005022981) prr15lb (ENSCLMG00005022983) cdk5rap3 (ENSCLMG00005022988) NFE2L1 (ENSCLMG00005022992) CBX1 (ENSCLMG00005022995) ENSCLMG00005022996 skap1 (ENSCLMG00005022997) hoxb1b (ENSCLMG00005022999) hoxb5b (ENSCLMG00005023000) hoxb6b (ENSCLMG00005023001) Stickleback MODERN SPECIES 5 g6pc1a.1 (ENSGACG00000003660) psme3 (ENSGACG00000003681) nbr1a (ENSGACG00000003702) tmem106a (ENSGACG00000003707) arl4d (ENSGACG00000003710) SOST (ENSGACG00000003719) meox1 (ENSGACG00000003722) etv4 (ENSGACG00000003724) ENSGACG00000003736 DHX8 (ENSGACG00000003750) ENSGACG00000003766 ormdl3 (ENSGACG00000003772) wnt3 (ENSGACG00000003779) nsfb (ENSGACG00000003786) psmd11b (ENSGACG00000003795) #21 cdk5r1b (ENSGACG00000003801) #22 ENSGACG00000003806 MYO1D (ENSGACG00000003807) #23 PDK2 (ENSGACG00000003817) TBKBP1 (ENSGACG00000003822) tbx21 (ENSGACG00000003829) osbpl7 (ENSGACG00000003833) mrpl10 (ENSGACG00000003841) pnpo (ENSGACG00000003855) prr15lb (ENSGACG00000003873) cdk5rap3 (ENSGACG00000003875) NFE2L1 (ENSGACG00000003904) CBX1 (ENSGACG00000003918) SNX11 (ENSGACG00000003925) skap1 (ENSGACG00000003929) ENSGACG00000003939 Perciformes_a ANCESTRAL SPECIES 8 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Pike perch MODERN SPECIES 3 psme3 (ENSSLUG00000011825) nbr1a (ENSSLUG00000011802) tmem106a (ENSSLUG00000011790) arl4d (ENSSLUG00000011786) DUSP3 (ENSSLUG00000011781) SOST (ENSSLUG00000011779) meox1 (ENSSLUG00000011772) etv4 (ENSSLUG00000011765) ENSSLUG00000011530 DHX8 (ENSSLUG00000010748) ENSSLUG00000010297 ormdl3 (ENSSLUG00000010244) wnt3 (ENSSLUG00000010232) nsfb (ENSSLUG00000008134) psmd11b (ENSSLUG00000007981) #21 cdk5r1b (ENSSLUG00000007967) #22 MYO1D (ENSSLUG00000007767) #23 PDK2 (ENSSLUG00000007518) TBKBP1 (ENSSLUG00000007453) tbx21 (ENSSLUG00000007445) osbpl7 (ENSSLUG00000007402) mrpl10 (ENSSLUG00000007379) pnpo (ENSSLUG00000007364) prr15lb (ENSSLUG00000007352) cdk5rap3 (ENSSLUG00000006108) NFE2L1 (ENSSLUG00000006038) CBX1 (ENSSLUG00000006036) ENSSLUG00000006030 skap1 (ENSSLUG00000006020) hoxb1b (ENSSLUG00000006012) hoxb6b (ENSSLUG00000005997) Channel bull blenny MODERN SPECIES 10 g6pc1a.2 (ENSCGOG00000022618) g6pc1a.1 (ENSCGOG00000022613) psme3 (ENSCGOG00000022490) nbr1a (ENSCGOG00000022484) tmem106a (ENSCGOG00000022477) ENSCGOG00000022475 SOST (ENSCGOG00000022474) meox1 (ENSCGOG00000022473) etv4 (ENSCGOG00000022471) DHX8 (ENSCGOG00000021929) ENSCGOG00000021848 ormdl3 (ENSCGOG00000021821) wnt3 (ENSCGOG00000021819) nsfb (ENSCGOG00000021447) psmd11b (ENSCGOG00000021286) #21 cdk5r1b (ENSCGOG00000021276) #22 MYO1D (ENSCGOG00000020276) #23 PDK2 (ENSCGOG00000019925) ENSCGOG00000019917 TBKBP1 (ENSCGOG00000019915) tbx21 (ENSCGOG00000019907) osbpl7 (ENSCGOG00000019665) mrpl10 (ENSCGOG00000019660) pnpo (ENSCGOG00000019656) prr15lb (ENSCGOG00000019655) cdk5rap3 (ENSCGOG00000019441) NFE2L1 (ENSCGOG00000019422) cbx1b (ENSCGOG00000019414) SNX11 (ENSCGOG00000019387) ENSCGOG00000019386 skap1 (ENSCGOG00000019383) Ovalentaria ANCESTRAL SPECIES 13 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Atherinomorphae ANCESTRAL SPECIES 10 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Oryzias ANCESTRAL SPECIES 11 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Oryzias_b ANCESTRAL SPECIES 9 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Indian medaka MODERN SPECIES 17 psme3 (ENSOMEG00000004369) nbr1a (ENSOMEG00000004347) tmem106a (ENSOMEG00000004329) arl4d (ENSOMEG00000004308) ENSOMEG00000004296 SOST (ENSOMEG00000004291) ENSOMEG00000004286 meox1 (ENSOMEG00000004270) etv4 (ENSOMEG00000004264) DHX8 (ENSOMEG00000004222) ENSOMEG00000004168 ormdl3 (ENSOMEG00000004147) wnt3 (ENSOMEG00000004139) nsfb (ENSOMEG00000004128) psmd11b (ENSOMEG00000004102) #21 cdk5r1b (ENSOMEG00000004056) #22 MYO1D (ENSOMEG00000004037) #23 PDK2 (ENSOMEG00000004011) TBKBP1 (ENSOMEG00000003994) tbx21 (ENSOMEG00000003983) osbpl7 (ENSOMEG00000003960) mrpl10 (ENSOMEG00000000741) pnpo (ENSOMEG00000003897) prr15lb (ENSOMEG00000003886) cdk5rap3 (ENSOMEG00000003828) NFE2L1 (ENSOMEG00000003764) CBX1 (ENSOMEG00000003749) ENSOMEG00000003715 skap1 (ENSOMEG00000003668) ENSOMEG00000003640 hoxb1b (ENSOMEG00000003629) Javanese ricefish MODERN SPECIES 10 sult2st2 (ENSOJAG00000020951) bsk146 (ENSOJAG00000021026) ENSOJAG00000021049 ENSOJAG00000021082 dhrs7cb (ENSOJAG00000021177) hs3st3l (ENSOJAG00000021185) ENSOJAG00000021191 ccdc57 (ENSOJAG00000021204) ENSOJAG00000021267 arg1 (ENSOJAG00000021333) ENSOJAG00000021568 ormdl3 (ENSOJAG00000012215) wnt3 (ENSOJAG00000012236) nsfb (ENSOJAG00000012430) psmd11b (ENSOJAG00000014369) #21 cdk5r1b (ENSOJAG00000014476) #22 MYO1D (ENSOJAG00000014526) #23 PDK2 (ENSOJAG00000014953) tbx21 (ENSOJAG00000015381) osbpl7 (ENSOJAG00000015460) mrpl10 (ENSOJAG00000016212) pnpo (ENSOJAG00000016222) prr15lb (ENSOJAG00000016240) cdk5rap3 (ENSOJAG00000016281) NFE2L1 (ENSOJAG00000016786) CBX1 (ENSOJAG00000016801) ENSOJAG00000016824 skap1 (ENSOJAG00000016831) hoxb1b (ENSOJAG00000016844) ENSOJAG00000016852 hoxb5b (ENSOJAG00000016856) Oryzias_a ANCESTRAL SPECIES 52 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Japanese Medaka HdrR MODERN SPECIES 10 g6pc1a.1 (ENSORLG00000018731) psme3 (ENSORLG00000018778) nbr1a (ENSORLG00000018851) tmem106a (ENSORLG00000018866) ENSORLG00000025889 SOST (ENSORLG00000028572) meox1 (ENSORLG00000011858) etv4 (ENSORLG00000011909) DHX8 (ENSORLG00000011951) thra (ENSORLG00000012005) ENSORLG00000025859 ormdl3 (ENSORLG00000027713) wnt3 (ENSORLG00000012027) nsfb (ENSORLG00000012044) psmd11b (ENSORLG00000012079) #21 cdk5r1b (ENSORLG00000012086) #22 MYO1D (ENSORLG00000012150) #23 ENSORLG00000023453 PDK2 (ENSORLG00000012173) ENSORLG00000030262 ENSORLG00000024271 tbx21 (ENSORLG00000026554) osbpl7 (ENSORLG00000012241) mrpl10 (ENSORLG00000025561) pnpo (ENSORLG00000029321) prr15lb (ENSORLG00000012296) cdk5rap3 (ENSORLG00000012325) NFE2L1 (ENSORLG00000028161) CBX1 (ENSORLG00000022226) ENSORLG00000022773 skap1 (ENSORLG00000026407) Chinese medaka MODERN SPECIES 216 ENSOSIG00000016927 g6pc1a.2 (ENSOSIG00000016925) g6pc1a.1 (ENSOSIG00000016924) psme3 (ENSOSIG00000016905) nbr1a (ENSOSIG00000016900) tmem106a (ENSOSIG00000016897) SOST (ENSOSIG00000016896) meox1 (ENSOSIG00000016895) etv4 (ENSOSIG00000016890) DHX8 (ENSOSIG00000016591) ENSOSIG00000015794 ormdl3 (ENSOSIG00000015780) wnt3 (ENSOSIG00000015776) nsfb (ENSOSIG00000011846) psmd11b (ENSOSIG00000011793) #21 cdk5r1b (ENSOSIG00000011787) #22 MYO1D (ENSOSIG00000011781) #23 PDK2 (ENSOSIG00000010337) TBKBP1 (ENSOSIG00000010325) tbx21 (ENSOSIG00000010324) osbpl7 (ENSOSIG00000009389) mrpl10 (ENSOSIG00000009376) pnpo (ENSOSIG00000009375) prr15lb (ENSOSIG00000009374) cdk5rap3 (ENSOSIG00000008635) NFE2L1 (ENSOSIG00000008612) cbx1b (ENSOSIG00000008611) ENSOSIG00000008606 skap1 (ENSOSIG00000008602) hoxb1b (ENSOSIG00000008590) ENSOSIG00000008588 Cyprinodontiformes ANCESTRAL SPECIES 13 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Cyprinodontoidei ANCESTRAL SPECIES 17 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Poeciliinae ANCESTRAL SPECIES 10 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Poecilia ANCESTRAL SPECIES 15 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 NAME_6 ANCESTRAL SPECIES ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Amazon molly MODERN SPECIES 259 g6pc1a.1 (ENSPFOG00000017437) psme3 (ENSPFOG00000017453) nbr1a (ENSPFOG00000017490) tmem106a (ENSPFOG00000017566) arl4d (ENSPFOG00000020447) DUSP3 (ENSPFOG00000017577) SOST (ENSPFOG00000017584) meox1 (ENSPFOG00000017586) etv4 (ENSPFOG00000017603) DHX8 (ENSPFOG00000017661) ENSPFOG00000017739 ormdl3 (ENSPFOG00000017787) wnt3 (ENSPFOG00000017788) nsfb (ENSPFOG00000017806) psmd11b (ENSPFOG00000017872) #21 cdk5r1b (ENSPFOG00000017899) #22 MYO1D (ENSPFOG00000017911) #23 PDK2 (ENSPFOG00000017978) TBKBP1 (ENSPFOG00000017995) tbx21 (ENSPFOG00000018019) osbpl7 (ENSPFOG00000018036) mrpl10 (ENSPFOG00000018077) pnpo (ENSPFOG00000018080) prr15lb (ENSPFOG00000020448) cdk5rap3 (ENSPFOG00000018092) NFE2L1 (ENSPFOG00000018108) CBX1 (ENSPFOG00000018123) CBX1 (ENSPFOG00000023882) SNX11 (ENSPFOG00000018135) skap1 (ENSPFOG00000018142) hoxb1b (ENSPFOG00000018156) Sailfin molly MODERN SPECIES 128 meox1 (ENSPLAG00000011588) etv4 (ENSPLAG00000011570) DHX8 (ENSPLAG00000011548) ENSPLAG00000011498 ormdl3 (ENSPLAG00000011471) wnt3 (ENSPLAG00000011456) nsfb (ENSPLAG00000011437) psmd11b (ENSPLAG00000011378) #21 cdk5r1b (ENSPLAG00000011351) #22 MYO1D (ENSPLAG00000011334) #23 Guppy MODERN SPECIES 449 g6pc1a.1 (ENSPREG00000011476) psme3 (ENSPREG00000011536) nbr1a (ENSPREG00000011556) tmem106a (ENSPREG00000011582) arl4d (ENSPREG00000011615) DUSP3 (ENSPREG00000011638) SOST (ENSPREG00000011706) meox1 (ENSPREG00000011721) etv4 (ENSPREG00000011732) DHX8 (ENSPREG00000011752) ENSPREG00000011800 ormdl3 (ENSPREG00000011837) wnt3 (ENSPREG00000011860) nsfb (ENSPREG00000011963) psmd11b (ENSPREG00000012686) #21 cdk5r1b (ENSPREG00000012729) #22 MYO1D (ENSPREG00000012763) #23 PDK2 (ENSPREG00000012826) TBKBP1 (ENSPREG00000012841) tbx21 (ENSPREG00000012858) osbpl7 (ENSPREG00000012881) mrpl10 (ENSPREG00000012907) pnpo (ENSPREG00000012911) prr15lb (ENSPREG00000012924) cdk5rap3 (ENSPREG00000012945) NFE2L1 (ENSPREG00000012983) CBX1 (ENSPREG00000013005) SNX11 (ENSPREG00000013016) skap1 (ENSPREG00000013030) ENSPREG00000013048 hoxb5b (ENSPREG00000013058) Platyfish MODERN SPECIES 1 psme3 (ENSXMAG00000027968) nbr1a (ENSXMAG00000017876) tmem106a (ENSXMAG00000017892) arl4d (ENSXMAG00000019874) DUSP3 (ENSXMAG00000017895) ENSXMAG00000022066 SOST (ENSXMAG00000017896) meox1 (ENSXMAG00000017899) etv4 (ENSXMAG00000021568) DHX8 (ENSXMAG00000017907) ENSXMAG00000017922 ormdl3 (ENSXMAG00000026826) wnt3 (ENSXMAG00000023933) nsfb (ENSXMAG00000017938) psmd11b (ENSXMAG00000017949) #21 cdk5r1b (ENSXMAG00000017963) #22 MYO1D (ENSXMAG00000017964) #23 PDK2 (ENSXMAG00000014954) TBKBP1 (ENSXMAG00000013648) tbx21 (ENSXMAG00000023411) osbpl7 (ENSXMAG00000013669) mrpl10 (ENSXMAG00000013700) pnpo (ENSXMAG00000013703) prr15lb (ENSXMAG00000019768) cdk5rap3 (ENSXMAG00000013715) NFE2L1 (ENSXMAG00000029109) CBX1 (ENSXMAG00000025560) ENSXMAG00000029233 skap1 (ENSXMAG00000013728) hoxb1b (ENSXMAG00000025601) hoxb5b (ENSXMAG00000000077) NAME_4 ANCESTRAL SPECIES 22 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000158354.c.a ENSGT00940000161108 Mummichog MODERN SPECIES 2379 ormdl3 (ENSFHEG00000006451) wnt3 (ENSFHEG00000006433) nsfb (ENSFHEG00000000666) psmd11b (ENSFHEG00000006315) #21 cdk5r1b (ENSFHEG00000006302) #22 MYO1D (ENSFHEG00000006274) #23 PDK2 (ENSFHEG00000006204) ENSFHEG00000006116 ENSFHEG00000006109 tbx21 (ENSFHEG00000006090) osbpl7 (ENSFHEG00000006051) mrpl10 (ENSFHEG00000005890) pnpo (ENSFHEG00000005883) prr15lb (ENSFHEG00000005875) cdk5rap3 (ENSFHEG00000005854) NFE2L1 (ENSFHEG00000005838) CBX1 (ENSFHEG00000005820) ENSFHEG00000005801 skap1 (ENSFHEG00000005784) hoxb1b (ENSFHEG00000005746) Sheepshead minnow MODERN SPECIES 130 g6pc1a.1 (ENSCVAG00000006361) psme3 (ENSCVAG00000006355) nbr1a (ENSCVAG00000006315) tmem106a (ENSCVAG00000006291) arl4d (ENSCVAG00000006282) ENSCVAG00000006236 SOST (ENSCVAG00000006221) meox1 (ENSCVAG00000006212) etv4 (ENSCVAG00000006202) DHX8 (ENSCVAG00000006188) ENSCVAG00000006123 ormdl3 (ENSCVAG00000006093) wnt3 (ENSCVAG00000006089) nsfb (ENSCVAG00000006072) psmd11b (ENSCVAG00000005990) #21 cdk5r1b (ENSCVAG00000005938) #22 MYO1D (ENSCVAG00000005932) #23 ENSCVAG00000005879 PDK2 (ENSCVAG00000005874) Aplocheiloidei ANCESTRAL SPECIES 4 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Mangrove rivulus MODERN SPECIES 4 g6pc1a.2 (ENSKMAG00000005966) g6pc1a.1 (ENSKMAG00000005942) psme3 (ENSKMAG00000005888) nbr1a (ENSKMAG00000005838) tmem106a (ENSKMAG00000005818) DUSP3 (ENSKMAG00000005769) SOST (ENSKMAG00000005745) meox1 (ENSKMAG00000005734) etv4 (ENSKMAG00000005670) DHX8 (ENSKMAG00000005568) ENSKMAG00000005517 ormdl3 (ENSKMAG00000005488) wnt3 (ENSKMAG00000005459) nsfb (ENSKMAG00000005387) psmd11b (ENSKMAG00000005315) #21 cdk5r1b (ENSKMAG00000005288) #22 MYO1D (ENSKMAG00000005199) #23 PDK2 (ENSKMAG00000005105) Turquoise killifish MODERN SPECIES 1621 ENSNFUG00015018613 tmem106a (ENSNFUG00015018609) arl4d (ENSNFUG00015018601) ENSNFUG00015018598 SOST (ENSNFUG00015018593) meox1 (ENSNFUG00015018591) ENSNFUG00015018589 etv4 (ENSNFUG00015018587) DHX8 (ENSNFUG00015014267) ENSNFUG00015013421 ENSNFUG00015013394 ORMDL3 (ENSNFUG00015013386) WNT3 (ENSNFUG00015013372) nsfb (ENSNFUG00015013189) PSMD11B (ENSNFUG00015013143) #21 CDK5R1B (ENSNFUG00015013133) #22 ENSNFUG00015013131 MYO1D (ENSNFUG00015013217) #23 PDK2 (ENSNFUG00015012628) tbx21 (ENSNFUG00015012575) osbpl7 (ENSNFUG00015011718) MRPL10 (ENSNFUG00015011631) PNPO (ENSNFUG00015011618) PRR15LB (ENSNFUG00015011613) cdk5rap3 (ENSNFUG00015011585) NFE2L1 (ENSNFUG00015011571) CBX1 (ENSNFUG00015011548) ENSNFUG00015011541 SNX11 (ENSNFUG00015011535) skap1 (ENSNFUG00015011524) hoxb1b (ENSNFUG00015011511) Ovalentaria_B ANCESTRAL SPECIES 21 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Pomacentridae ANCESTRAL SPECIES 41 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000159774 Pomacentridae_A ANCESTRAL SPECIES 39 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000159774 Amphiprion ANCESTRAL SPECIES 59 ENSGT00950000183150.a.a.a.c ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 ENSGT00940000158354.c.a Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 735 ormdl3 (ENSAOCG00000023620) wnt3 (ENSAOCG00000001695) nsfb (ENSAOCG00000023589) psmd11b (ENSAOCG00000023556) #21 cdk5r1b (ENSAOCG00000023525) #22 Clown anemonefish MODERN SPECIES 1994 cdk5r1b (ENSAOCG00000018259) #22 MYO1D (ENSAOCG00000001302) #23 PDK2 (ENSAOCG00000018176) TBKBP1 (ENSAOCG00000001287) Orange clownfish MODERN SPECIES 10 psme3 (ENSAPEG00000005989) ENSAPEG00000005969 nbr1a (ENSAPEG00000005951) tmem106a (ENSAPEG00000005942) ENSAPEG00000005889 SOST (ENSAPEG00000005879) meox1 (ENSAPEG00000005786) etv4 (ENSAPEG00000005761) ENSAPEG00000005739 DHX8 (ENSAPEG00000005641) ENSAPEG00000005621 ormdl3 (ENSAPEG00000005565) wnt3 (ENSAPEG00000005543) nsfb (ENSAPEG00000005478) psmd11b (ENSAPEG00000005372) #21 cdk5r1b (ENSAPEG00000005355) #22 ENSAPEG00000005336 MYO1D (ENSAPEG00000005253) #23 PDK2 (ENSAPEG00000005179) TBKBP1 (ENSAPEG00000005081) tbx21 (ENSAPEG00000005065) osbpl7 (ENSAPEG00000004960) mrpl10 (ENSAPEG00000004939) pnpo (ENSAPEG00000004906) prr15lb (ENSAPEG00000004875) cdk5rap3 (ENSAPEG00000004768) NFE2L1 (ENSAPEG00000004752) CBX1 (ENSAPEG00000004728) ENSAPEG00000004721 skap1 (ENSAPEG00000004678) hoxb1b (ENSAPEG00000004664) Spiny chromis MODERN SPECIES 2970 psmd11b (ENSAPOG00000019796) #21 cdk5r1b (ENSAPOG00000019816) #22 Cichlidae ANCESTRAL SPECIES 15 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Pseudocrenilabrinae ANCESTRAL SPECIES 9 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Pseudocrenilabrinae_A ANCESTRAL SPECIES 7 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Haplochromini ANCESTRAL SPECIES 17 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b.a ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Burton s mouthbrooder MODERN SPECIES 274 g6pc1a.1 (ENSHBUG00000005914) psme3 (ENSHBUG00000005878) nbr1a (ENSHBUG00000005825) tmem106a (ENSHBUG00000005810) arl4d (ENSHBUG00000005802) ENSHBUG00000005769 SOST (ENSHBUG00000005750) meox1 (ENSHBUG00000005729) etv4 (ENSHBUG00000005707) DHX8 (ENSHBUG00000005644) ENSHBUG00000005555 ormdl3 (ENSHBUG00000005502) nsfb (ENSHBUG00000005476) wnt3 (ENSHBUG00000000764) psmd11b (ENSHBUG00000005413) #21 cdk5r1b (ENSHBUG00000005346) #22 MYO1D (ENSHBUG00000005330) #23 ENSHBUG00000005271 PDK2 (ENSHBUG00000005261) TBKBP1 (ENSHBUG00000005232) tbx21 (ENSHBUG00000005168) osbpl7 (ENSHBUG00000005121) mrpl10 (ENSHBUG00000004903) pnpo (ENSHBUG00000004889) prr15lb (ENSHBUG00000004866) cdk5rap3 (ENSHBUG00000004839) NFE2L1 (ENSHBUG00000004784) CBX1 (ENSHBUG00000004762) ENSHBUG00000004737 skap1 (ENSHBUG00000004728) hoxb1b (ENSHBUG00000004719) Haplochromini_A ANCESTRAL SPECIES 16 ENSGT00950000183150.a.a.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b.a ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 P. nyererei MODERN SPECIES 312 g6pc1a.1 (ENSPNYG00000001674) psme3 (ENSPNYG00000001636) nbr1a (ENSPNYG00000001625) tmem106a (ENSPNYG00000001555) arl4d (ENSPNYG00000001516) ENSPNYG00000001494 SOST (ENSPNYG00000001488) meox1 (ENSPNYG00000001478) etv4 (ENSPNYG00000001425) DHX8 (ENSPNYG00000001365) ENSPNYG00000001343 ormdl3 (ENSPNYG00000001323) wnt3 (ENSPNYG00000001306) nsfb (ENSPNYG00000001221) psmd11b (ENSPNYG00000001168) #21 cdk5r1b (ENSPNYG00000001138) #22 MYO1D (ENSPNYG00000001082) #23 ENSPNYG00000001065 PDK2 (ENSPNYG00000001017) TBKBP1 (ENSPNYG00000000967) tbx21 (ENSPNYG00000000934) osbpl7 (ENSPNYG00000000854) mrpl10 (ENSPNYG00000000847) pnpo (ENSPNYG00000000822) prr15lb (ENSPNYG00000000803) cdk5rap3 (ENSPNYG00000000768) NFE2L1 (ENSPNYG00000000746) CBX1 (ENSPNYG00000000724) ENSPNYG00000000701 skap1 (ENSPNYG00000000665) hoxb1b (ENSPNYG00000000656) Haplochromini_B ANCESTRAL SPECIES 15 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b.j ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b.a ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.a.a ENSGT00940000160113 ENSGT00390000017856.b ENSGT00940000159503 Eastern happy MODERN SPECIES 20 g6pc1a.1 (ENSACLG00000025091) psme3 (ENSACLG00000025057) nbr1a (ENSACLG00000025016) tmem106a (ENSACLG00000025007) arl4d (ENSACLG00000024991) ENSACLG00000024978 SOST (ENSACLG00000024850) meox1 (ENSACLG00000024838) etv4 (ENSACLG00000024826) DHX8 (ENSACLG00000024759) ENSACLG00000024723 ormdl3 (ENSACLG00000024712) wnt3 (ENSACLG00000024697) nsfb (ENSACLG00000024545) psmd11b (ENSACLG00000024496) #21 cdk5r1b (ENSACLG00000024490) #22 MYO1D (ENSACLG00000024433) #23 ENSACLG00000024421 PDK2 (ENSACLG00000024391) TBKBP1 (ENSACLG00000024327) tbx21 (ENSACLG00000024135) osbpl7 (ENSACLG00000024111) mrpl10 (ENSACLG00000024106) pnpo (ENSACLG00000024083) prr15lb (ENSACLG00000024070) cdk5rap3 (ENSACLG00000024017) NFE2L1 (ENSACLG00000023997) CBX1 (ENSACLG00000023967) ENSACLG00000023959 skap1 (ENSACLG00000023934) hoxb1b (ENSACLG00000023912) Zebra mbuna MODERN SPECIES 1111 g6pc1a.1 (ENSMZEG00005007323) psme3 (ENSMZEG00005007339) nbr1a (ENSMZEG00005007368) tmem106a (ENSMZEG00005007383) arl4d (ENSMZEG00005007392) DUSP3 (ENSMZEG00005007412) SOST (ENSMZEG00005007434) meox1 (ENSMZEG00005007440) etv4 (ENSMZEG00005007459) DHX8 (ENSMZEG00005007559) ENSMZEG00005007617 ormdl3 (ENSMZEG00005007633) wnt3 (ENSMZEG00005007648) nsfb (ENSMZEG00005007665) psmd11b (ENSMZEG00005007703) #21 cdk5r1b (ENSMZEG00005007741) #22 MYO1D (ENSMZEG00005007763) #23 ENSMZEG00005007822 PDK2 (ENSMZEG00005007834) TBKBP1 (ENSMZEG00005007868) ENSMZEG00005007896 tbx21 (ENSMZEG00005007904) osbpl7 (ENSMZEG00005007937) mrpl10 (ENSMZEG00005008005) pnpo (ENSMZEG00005008023) prr15lb (ENSMZEG00005008031) pnpo (ENSMZEG00005008034) prr15lb (ENSMZEG00005008046) cdk5rap3 (ENSMZEG00005008062) NFE2L1 (ENSMZEG00005008081) CBX1 (ENSMZEG00005008108) Lyretail cichlid MODERN SPECIES 317 ANK3 (ENSNBRG00000022983) g6pc1a.2 (ENSNBRG00000023016) g6pc1a.1 (ENSNBRG00000023025) psme3 (ENSNBRG00000023031) nbr1a (ENSNBRG00000023045) tmem106a (ENSNBRG00000023055) ENSNBRG00000023080 meox1 (ENSNBRG00000023086) etv4 (ENSNBRG00000023116) DHX8 (ENSNBRG00000023205) ENSNBRG00000023244 ormdl3 (ENSNBRG00000023254) wnt3 (ENSNBRG00000023262) nsfb (ENSNBRG00000023269) psmd11b (ENSNBRG00000023279) #21 cdk5r1b (ENSNBRG00000023289) #22 MYO1D (ENSNBRG00000023297) #23 ENSNBRG00000023304 PDK2 (ENSNBRG00000023313) TBKBP1 (ENSNBRG00000023332) tbx21 (ENSNBRG00000023348) osbpl7 (ENSNBRG00000023360) mrpl10 (ENSNBRG00000023367) pnpo (ENSNBRG00000023371) prr15lb (ENSNBRG00000023383) cdk5rap3 (ENSNBRG00000023398) NFE2L1 (ENSNBRG00000023442) CBX1 (ENSNBRG00000023447) ENSNBRG00000023453 skap1 (ENSNBRG00000023467) hoxb1b (ENSNBRG00000023474) Nile tilapia MODERN SPECIES 20 g6pc1a.1 (ENSONIG00000018270) psme3 (ENSONIG00000018267) nbr1a (ENSONIG00000018263) tmem106a (ENSONIG00000018261) arl4d (ENSONIG00000043081) ENSONIG00000018260 sost (ENSONIG00000036894) meox1 (ENSONIG00000018256) etv4 (ENSONIG00000018249) DHX8 (ENSONIG00000018248) ENSONIG00000018247 ormdl3 (ENSONIG00000041840) wnt3 (ENSONIG00000027851) nsfb (ENSONIG00000018240) psmd11b (ENSONIG00000018238) #21 cdk5r1b (ENSONIG00000018237) #22 ENSONIG00000032662 MYO1D (ENSONIG00000018232) #23 PDK2 (ENSONIG00000018225) tbx21 (ENSONIG00000018223) osbpl7 (ENSONIG00000018222) mrpl10 (ENSONIG00000038469) pnpo (ENSONIG00000018219) prr15lb (ENSONIG00000021237) cdk5rap3 (ENSONIG00000018216) NFE2L1 (ENSONIG00000018214) cbx1 (ENSONIG00000032457) ENSONIG00000027588 skap1 (ENSONIG00000018210) hoxb1b (ENSONIG00000018209) ENSONIG00000032613 Midas cichlid MODERN SPECIES 113 g6pc1a.1 (ENSACIG00000013554) psme3 (ENSACIG00000013533) nbr1a (ENSACIG00000013439) tmem106a (ENSACIG00000013382) arl4d (ENSACIG00000013359) ENSACIG00000013348 SOST (ENSACIG00000013335) meox1 (ENSACIG00000013325) etv4 (ENSACIG00000013230) DHX8 (ENSACIG00000013170) ENSACIG00000013155 ormdl3 (ENSACIG00000013146) wnt3 (ENSACIG00000013133) nsfb (ENSACIG00000013096) psmd11b (ENSACIG00000013064) #21 cdk5r1b (ENSACIG00000013056) #22 MYO1D (ENSACIG00000013002) #23 PDK2 (ENSACIG00000012967) TBKBP1 (ENSACIG00000012942) tbx21 (ENSACIG00000012923) osbpl7 (ENSACIG00000012891) mrpl10 (ENSACIG00000012855) pnpo (ENSACIG00000012840) prr15lb (ENSACIG00000012821) cdk5rap3 (ENSACIG00000012797) NFE2L1 (ENSACIG00000012781) CBX1 (ENSACIG00000012511) ENSACIG00000012501 SNX11 (ENSACIG00000012442) skap1 (ENSACIG00000012394) hoxb1b (ENSACIG00000012377) Otomorpha ANCESTRAL SPECIES 1 ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.b ENSGT00940000162682.B.b ENSGT00940000157917.a.a ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Otophysi ANCESTRAL SPECIES ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00390000004836 ENSGT00960000186809 ENSGT00940000159664 ENSGT01090000260051.b.a.b ENSGT00940000156819.a.b ENSGT00390000005895 ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Characiphysae ANCESTRAL SPECIES 1 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00390000004836 ENSGT00940000159664 ENSGT01090000260051.b.a.b ENSGT00940000156819.a.b ENSGT00390000005895 ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Channel catfish MODERN SPECIES 4 nbr1a (ENSIPUG00000019375) tmem106a (ENSIPUG00000019345) Arl4d (ENSIPUG00000019342) Dusp3 (ENSIPUG00000019320) Sost (ENSIPUG00000019306) meox1 (ENSIPUG00000019300) etv4 (ENSIPUG00000019283) dhx8 (ENSIPUG00000019179) SPATA20 (ENSIPUG00000019141) ENSIPUG00000019134 CACNA1G (ENSIPUG00000018742) ENSIPUG00000018713 ENSIPUG00000018711 ogfod3 (ENSIPUG00000018706) psmd11b (ENSIPUG00000018634) #21 cdk5r1b (ENSIPUG00000018623) #22 MYO1D (ENSIPUG00000018549) #23 ENSIPUG00000018539 ENSIPUG00000018536 PDK2 (ENSIPUG00000018521) tbkbp1 (ENSIPUG00000018504) tbx21 (ENSIPUG00000018470) osbpl7 (ENSIPUG00000018363) mrpl10 (ENSIPUG00000018330) pnpo (ENSIPUG00000018311) prr15lb (ENSIPUG00000018303) cdk5rap3 (ENSIPUG00000018270) ENSIPUG00000018255 NFE2L1 (ENSIPUG00000018201) cbx1 (ENSIPUG00000018189) ccdc189 (ENSIPUG00000018176) Characiphysae_b ANCESTRAL SPECIES 3 ENSGT00390000017856.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00390000004836 ENSGT00940000159664 ENSGT01090000260051.b.a.b ENSGT00940000156819.a.b ENSGT00390000005895 ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Characoidei ANCESTRAL SPECIES 6 ENSGT00390000017856.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00390000004836 ENSGT00940000159664 ENSGT01090000260051.b.a.b ENSGT00940000156819.a.b ENSGT00390000005895 ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Red-bellied piranha MODERN SPECIES 42 meox1 (ENSPNAG00000008452) etv4 (ENSPNAG00000001016) DHX8 (ENSPNAG00000008427) SPATA20 (ENSPNAG00000000974) CACNA1G (ENSPNAG00000008398) ENSPNAG00000000942 ENSPNAG00000008363 ENSPNAG00000000932 ogfod3 (ENSPNAG00000000928) psmd11b (ENSPNAG00000000922) #21 cdk5r1b (ENSPNAG00000000911) #22 MYO1D (ENSPNAG00000000903) #23 ENSPNAG00000008311 PDK2 (ENSPNAG00000008307) TBKBP1 (ENSPNAG00000008294) tbx21 (ENSPNAG00000008289) osbpl7 (ENSPNAG00000000854) mrpl10 (ENSPNAG00000000847) pnpo (ENSPNAG00000000845) prr15lb (ENSPNAG00000008267) cdk5rap3 (ENSPNAG00000008263) ENSPNAG00000008256 NFE2L1 (ENSPNAG00000008250) cbx1b (ENSPNAG00000000806) phkg2 (ENSPNAG00000008236) ccdc189 (ENSPNAG00000000790) Mexicana tetra MODERN SPECIES 19 nbr1a (ENSAMXG00000009187) tmem106a (ENSAMXG00000009256) DUSP3 (ENSAMXG00000009289) SOST (ENSAMXG00000009315) meox1 (ENSAMXG00000036063) etv4 (ENSAMXG00000009346) DHX8 (ENSAMXG00000009430) SPATA20 (ENSAMXG00000009466) ENSAMXG00000029856 ENSAMXG00000036030 ENSAMXG00000030293 ENSAMXG00000035321 ENSAMXG00000025203 ogfod3 (ENSAMXG00000036703) psmd11b (ENSAMXG00000010395) #21 cdk5r1b (ENSAMXG00000010409) #22 MYO1D (ENSAMXG00000010422) #23 PDK2 (ENSAMXG00000010438) TBKBP1 (ENSAMXG00000010457) tbx21 (ENSAMXG00000010492) osbpl7 (ENSAMXG00000010519) mrpl10 (ENSAMXG00000040331) pnpo (ENSAMXG00000010544) prr15lb (ENSAMXG00000025204) cdk5rap3 (ENSAMXG00000010548) ENSAMXG00000041328 NFE2L1 (ENSAMXG00000030120) ENSAMXG00000041124 cbx1b (ENSAMXG00000036601) phkg2 (ENSAMXG00000040543) RNF40 (ENSAMXG00000010694) Electric eel MODERN SPECIES 757 ENSEEEG00000015080 ogfod3 (ENSEEEG00000015078) psmd11b (ENSEEEG00000015072) #21 cdk5r1b (ENSEEEG00000015069) #22 MYO1D (ENSEEEG00000015062) #23 ENSEEEG00000015061 PDK2 (ENSEEEG00000014910) Cyprinoidei ANCESTRAL SPECIES 18 ENSGT00940000166248.a ENSGT00940000162682.B.a ENSGT01060000253506 ENSGT00940000161341.a.a ENSGT00940000163612 ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00390000004836 ENSGT00960000186809 ENSGT00940000159664 ENSGT00940000156819.a.b ENSGT00390000005895 ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.b ENSGT00390000000713 ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a ENSGT00940000154152.b.b ENSGT00940000160435 ENSGT00940000154323.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 64 ENSGT00390000016335.h.j ENSGT00940000166248.a.b ENSGT01060000253506 ENSGT00940000161341.a.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b.c ENSGT00940000154018.a.c.a ENSGT00940000158142.c ENSGT00940000155510 ENSGT00390000004836.a ENSGT00940000159664.d ENSGT00940000156819.a.b.d.a ENSGT00940000156819.a.b.c.b ENSGT00390000005895.a ENSGT00530000063301.a.a.c.a.j #21 ENSGT00390000008812.b.b.a.g #22 ENSGT00940000157411.a #23 ENSGT00940000156038.a.b.b ENSGT01030000234646.B.a.a.a.a.a.b ENSGT00940000153704.B.c.a ENSGT00940000166447.b ENSGT00940000157439.b.a ENSGT00390000011219.e.b ENSGT00940000154534.b.b.f ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a.f ENSGT00940000154152.b.b.b ENSGT00940000160435.c ENSGT00390000002866.a.b ENSGT00940000164729.a.b.h ENSGT00940000165156.f Goldfish MODERN SPECIES 3 skap1 (ENSCARG00000015074) psme3 (ENSCARG00000014694) nbr1a (ENSCARG00000014661) tmem106a (ENSCARG00000014654) arl4d (ENSCARG00000014648) ENSCARG00000014643 SOST (ENSCARG00000014639) meox1 (ENSCARG00000014631) etv4 (ENSCARG00000014605) DHX8 (ENSCARG00000009308) CACNA1G (ENSCARG00000005904) ENSCARG00000005702 ENSCARG00000005695 ogfod3 (ENSCARG00000005679) psmd11b (ENSCARG00000005665) #21 cdk5r1b (ENSCARG00000005645) #22 MYO1D (ENSCARG00000003148) #23 PDK2 (ENSCARG00000002696) TBKBP1 (ENSCARG00000002654) tbx21 (ENSCARG00000002646) osbpl7 (ENSCARG00000002627) mrpl10 (ENSCARG00000002611) pnpo (ENSCARG00000002600) prr15lb (ENSCARG00000002595) cdk5rap3 (ENSCARG00000002583) NFE2L1 (ENSCARG00000002569) cbx1b (ENSCARG00000002543) ENSCARG00000002537 phkg2 (ENSCARG00000002488) RNF40 (ENSCARG00000002345) ENSCARG00000002279 Cyprininae_a ANCESTRAL SPECIES 18 ENSGT00390000016335.h.j ENSGT00940000166248.a.b ENSGT01060000253506 ENSGT00940000161341.a.a.a ENSGT00940000162682.B.a.c ENSGT00390000014900.b.b.b.c ENSGT00940000154018.a.c.a ENSGT00940000158142.c ENSGT00940000155510.v ENSGT00390000004836.a ENSGT00940000159664.d ENSGT00940000156819.a.b.d.a ENSGT00940000156819.a.b.c.b ENSGT00390000005895.a ENSGT00530000063301.a.a.c.a.j #21 ENSGT00390000008812.b.b.a.g #22 ENSGT00940000157411.a #23 ENSGT00940000156038.a.b.b.c ENSGT01030000234646.B.a.a.a.a.a.b ENSGT00940000153704.B.c.a ENSGT00940000166447.b ENSGT00940000157439.b.a ENSGT00390000011219.e.b ENSGT00940000154534.b.b.f ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a.f ENSGT00940000154152.b.b.b ENSGT00940000160435.c ENSGT00390000002866.a.b ENSGT00940000164729.a.b.h ENSGT00940000165156.f Common carp reference MODERN SPECIES 25 tmem106a (ENSCCRG00000023144) ENSCCRG00000064812 arl4d (ENSCCRG00000067749) ENSCCRG00000076696 ENSCCRG00000081681 SOST (ENSCCRG00000010772) meox1 (ENSCCRG00000059426) etv4 (ENSCCRG00000021484) DHX8 (ENSCCRG00000065848) ENSCCRG00000023174 ENSCCRG00000078541 ENSCCRG00000053281 ENSCCRG00000026002 ogfod3 (ENSCCRG00000070519) psmd11b (ENSCCRG00000024625) #21 cdk5r1b (ENSCCRG00000068741) #22 ENSCCRG00000076292 #23 ENSCCRG00000027898 ENSCCRG00000063984 TBKBP1 (ENSCCRG00000077031) tbx21 (ENSCCRG00000027877) osbpl7 (ENSCCRG00000027864) cdk5rap3 (ENSCCRG00000027849) prr15lb (ENSCCRG00000058633) NFE2L1 (ENSCCRG00000027844) phkg2 (ENSCCRG00000070942) cbx1b (ENSCCRG00000030872) ccdc189 (ENSCCRG00000030884) RNF40 (ENSCCRG00000030970) znf668 (ENSCCRG00000031067) ENSCCRG00000058890 Golden-line barbel MODERN SPECIES 25 ENSSGRG00000015895 ogfod3 (ENSSGRG00000015896) psmd11b (ENSSGRG00000015897) #21 cdk5r1b (ENSSGRG00000015939) #22 MYO1D (ENSSGRG00000015949) #23 ENSSGRG00000016909 PDK2 (ENSSGRG00000016914) ENSSGRG00000017466 tbx21 (ENSSGRG00000017468) osbpl7 (ENSSGRG00000017476) pnpo (ENSSGRG00000017907) prr15lb (ENSSGRG00000017916) nfe2l1b (ENSSGRG00000017919) cbx1b (ENSSGRG00000017920) phkg2 (ENSSGRG00000017924) RNF40 (ENSSGRG00000017954) ENSSGRG00000018862 znf668 (ENSSGRG00000018864) cd37 (ENSSGRG00000018868) Cyprininae ANCESTRAL SPECIES 172 ENSGT00940000156819.a.b.c.a ENSGT00390000005895.b ENSGT00530000063301.a.a.c.a.i #21 ENSGT00390000008812.b.b.a.h #22 ENSGT00940000157411.b #23 ENSGT01030000234646.B.a.a.a.a.a.a ENSGT00940000153704.B.c.b.a ENSGT00940000166447.a ENSGT00940000157439.b.b ENSGT00390000000603 ENSGT00390000011219.e.a ENSGT00940000154534.b.b.e ENSGT00390000011219.f ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.e ENSGT00940000154152.b.b.a ENSGT00940000160435.d ENSGT00940000154323.a ENSGT00390000002866.a.a Goldfish MODERN SPECIES 2288 ENSCARG00000066307 ogfod3 (ENSCARG00000066289) psmd11b (ENSCARG00000066262) #21 cdk5r1b (ENSCARG00000066257) #22 ENSCARG00000060553 #23 PDK2 (ENSCARG00000058980) TBKBP1 (ENSCARG00000058853) tbx21 (ENSCARG00000058837) osbpl7 (ENSCARG00000058721) ENSCARG00000058662 prr15lb (ENSCARG00000058654) NFE2L1 (ENSCARG00000058638) cbx1b (ENSCARG00000058530) phkg2 (ENSCARG00000058370) RNF40 (ENSCARG00000058123) ENSCARG00000058046 znf668 (ENSCARG00000058027) gall (ENSCARG00000058003) valopb (ENSCARG00000057974) Cyprininae_a ANCESTRAL SPECIES 8 ENSGT00390000016335.h.i ENSGT00940000166248.a.a ENSGT00940000161341.a.a.b ENSGT00940000162682.B.a.d ENSGT00390000014900.b.b.b.d ENSGT00940000154018.a.c.b ENSGT00940000158142.d ENSGT00940000155510.w ENSGT00390000004836.b ENSGT00960000186809 ENSGT00940000159664.c ENSGT00940000159286.a.b.d.b ENSGT00940000156819.a.b.c.a ENSGT00390000005895.b ENSGT00530000063301.a.a.c.a.i #21 ENSGT00390000008812.b.b.a.h #22 ENSGT00940000157411.b #23 ENSGT01030000234646.B.a.a.a.a.a.a ENSGT00940000153704.B.c.b.a ENSGT00940000153704.B.c.b.b ENSGT00940000166447.a ENSGT00940000157439.b.b ENSGT00390000000603 ENSGT00390000011219.e.a ENSGT00940000154534.b.b.e ENSGT00390000011219.f ENSGT00750000118756.a ENSGT00950000182892.a.b.a.b.a.e ENSGT00940000154152.b.b.a ENSGT00940000160435.d ENSGT00940000154323.a Common carp reference MODERN SPECIES 44 skap1 (ENSCCRG00000067435) psme3 (ENSCCRG00000026630) nbr1a (ENSCCRG00000026638) tmem106a (ENSCCRG00000026645) arl4d (ENSCCRG00000066519) ENSCCRG00000021459 SOST (ENSCCRG00000021463) meox1 (ENSCCRG00000056846) etv4 (ENSCCRG00000075759) DHX8 (ENSCCRG00000021564) ENSCCRG00000023145 ENSCCRG00000082564 ENSCCRG00000027283 ogfod3 (ENSCCRG00000027554) psmd11b (ENSCCRG00000027594) #21 cdk5r1b (ENSCCRG00000069469) #22 ENSCCRG00000066588 #23 ENSCCRG00000027552 ENSCCRG00000043201 TBKBP1 (ENSCCRG00000082246) tbx21 (ENSCCRG00000054449) osbpl7 (ENSCCRG00000027561) prr15lb (ENSCCRG00000055334) pnpo (ENSCCRG00000073591) ENSCCRG00000062559 ENSCCRG00000027591 phkg2 (ENSCCRG00000031070) cbx1b (ENSCCRG00000027598) ENSCCRG00000030924 ENSCCRG00000038032 znf668 (ENSCCRG00000038033) Golden-line barbel MODERN SPECIES 1292 ENSSGRG00000007895 ogfod3 (ENSSGRG00000007891) psmd11b (ENSSGRG00000007870) #21 cdk5r1b (ENSSGRG00000007867) #22 ENSSGRG00000002993 #23 PDK2 (ENSSGRG00000002763) Zebrafish MODERN SPECIES 3 nbr1a (ENSDARG00000077297) tmem106a (ENSDARG00000045075) ENSDARG00000096637 arl4d (ENSDARG00000045074) ENSDARG00000061255 SOST (ENSDARG00000061259) meox1 (ENSDARG00000007891) etv4 (ENSDARG00000018303) DHX8 (ENSDARG00000054707) SPATA20 (ENSDARG00000013880) CACNA1G (ENSDARG00000089913) ENSDARG00000009624 ENSDARG00000115189 ogfod3 (ENSDARG00000078481) psmd11b (ENSDARG00000005134) #21 cdk5r1b (ENSDARG00000045087) #22 MYO1D (ENSDARG00000036863) #23 ENSDARG00000088794 PDK2 (ENSDARG00000020876) TBKBP1 (ENSDARG00000061473) tbx21 (ENSDARG00000004473) osbpl7 (ENSDARG00000012981) mrpl10 (ENSDARG00000045091) pnpo (ENSDARG00000017612) prr15lb (ENSDARG00000029308) cdk5rap3 (ENSDARG00000045092) ENSDARG00000096711 nfe2l1b (ENSDARG00000076533) cbx1b (ENSDARG00000054442) phkg2 (ENSDARG00000054208) ccdc189 (ENSDARG00000096777) Clupeiformes ANCESTRAL SPECIES 5 ENSGT00390000017856.b ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000162682.B.a ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a.c.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00390000000713 ENSGT00950000182892.a.b.a.b.a ENSGT00940000160435 ENSGT00940000154323.a ENSGT01060000248591.a.a.a.a.a ENSGT00390000017961 ENSGT00950000182951.A.a.a.c.a.a ENSGT00940000162800 Atlantic herring MODERN SPECIES 15 nbr1a (ENSCHAG00000015020) tmem106a (ENSCHAG00000015026) arl4d (ENSCHAG00000015038) ENSCHAG00000015066 ENSCHAG00000015090 thraa (ENSCHAG00000015123) SOST (ENSCHAG00000015693) meox1 (ENSCHAG00000015699) etv4 (ENSCHAG00000015717) DHX8 (ENSCHAG00000015803) ENSCHAG00000018519 ormdl3 (ENSCHAG00000018526) wnt3 (ENSCHAG00000018541) nsfb (ENSCHAG00000018607) psmd11b (ENSCHAG00000019372) #21 cdk5r1b (ENSCHAG00000019504) #22 MYO1D (ENSCHAG00000019547) #23 PDK2 (ENSCHAG00000020213) TBKBP1 (ENSCHAG00000020823) tbx21 (ENSCHAG00000020835) osbpl7 (ENSCHAG00000020861) mrpl10 (ENSCHAG00000021277) pnpo (ENSCHAG00000021317) ENSCHAG00000021332 cdk5rap3 (ENSCHAG00000021352) NFE2L1 (ENSCHAG00000021868) phkg2 (ENSCHAG00000021900) ccdc189 (ENSCHAG00000021976) tmem130 (ENSCHAG00000021985) ENSCHAG00000021994 nptx2b (ENSCHAG00000022009) Denticle herring MODERN SPECIES 18 ENSDCDG00000017739 HOXB5 (ENSDCDG00000017717) skap1 (ENSDCDG00000017706) PSME3 (ENSDCDG00000017700) tmem106a (ENSDCDG00000017695) arl4d (ENSDCDG00000017691) ENSDCDG00000017684 SOST (ENSDCDG00000017681) meox1 (ENSDCDG00000017678) etv4 (ENSDCDG00000017668) DHX8 (ENSDCDG00000017361) thraa (ENSDCDG00000015512) ormdl3 (ENSDCDG00000015446) wnt3 (ENSDCDG00000015438) nsfb (ENSDCDG00000013146) cdk5r1b (ENSDCDG00000013097) #22 MYO1D (ENSDCDG00000013011) #23 PDK2 (ENSDCDG00000011078) TBKBP1 (ENSDCDG00000010966) tbx21 (ENSDCDG00000010837) osbpl7 (ENSDCDG00000010329) mrpl10 (ENSDCDG00000010282) pnpo (ENSDCDG00000010278) ENSDCDG00000010275 cdk5rap3 (ENSDCDG00000010004) NFE2L1 (ENSDCDG00000009981) phkg2 (ENSDCDG00000009965) nptx2b (ENSDCDG00000009961) trrap (ENSDCDG00000007651) FAM20C (ENSDCDG00000005588) foxl3 (ENSDCDG00000029403) Osteoglossiformes ANCESTRAL SPECIES 43 ENSGT00950000183098.a.b ENSGT00390000016335.h ENSGT00940000166248.a ENSGT00940000161341.a.a ENSGT00940000154152.b.b ENSGT00940000162682.B ENSGT00390000014900.b.b.b ENSGT00940000154018.a ENSGT00940000158142 ENSGT00940000155510 ENSGT00940000157917.a.b ENSGT00950000183178.b.b.b ENSGT00940000157854 ENSGT00530000064085.c ENSGT00530000063301.a.a #21 ENSGT00390000008812.b.b.a #22 ENSGT00940000157411 #23 ENSGT01030000234646.B.a.a.a.a.a ENSGT00940000153704.B.c ENSGT00940000166447 ENSGT00940000157439.b ENSGT00390000000603 ENSGT00390000011219 ENSGT00940000154534.b.a ENSGT00390000000713 ENSGT00750000118756.a ENSGT00940000157439.a ENSGT00390000004405.b ENSGT00950000182892.a.b.a.b.a ENSGT00940000160113 ENSGT00390000017856.b Asian bonytongue MODERN SPECIES 13 ENSSFOG00015000166 sat2b (ENSSFOG00015027230) cldn15a (ENSSFOG00015000205) fis1 (ENSSFOG00015000211) ENSSFOG00015000241 ENSSFOG00015032597 grk1b (ENSSFOG00015000349) rangrf (ENSSFOG00015000389) slc25a35 (ENSSFOG00015000398) ENSSFOG00015000434 ormdl3 (ENSSFOG00015000476) wnt3 (ENSSFOG00015000492) nsfb (ENSSFOG00015000512) ENSSFOG00015025854 psmd11b (ENSSFOG00015000603) #21 cdk5r1b (ENSSFOG00015030884) #22 MYO1D (ENSSFOG00015000681) #23 PDK2 (ENSSFOG00015000764) TBKBP1 (ENSSFOG00015000820) tbx21 (ENSSFOG00015028517) osbpl7 (ENSSFOG00015001331) mrpl10 (ENSSFOG00015001414) pnpo (ENSSFOG00015029234) prr15la (ENSSFOG00015001431) cdk5rap3 (ENSSFOG00015001461) ENSSFOG00015001531 COPZ2 (ENSSFOG00015001561) NFE2L1 (ENSSFOG00015001617) snx11 (ENSSFOG00015001657) skap1 (ENSSFOG00015001828) hoxb1a (ENSSFOG00015001903) P. kingsleyae MODERN SPECIES 140 ENSPKIG00000001637 tmem106a (ENSPKIG00000001622) arl4d (ENSPKIG00000001594) ENSPKIG00000001572 cbx1b (ENSPKIG00000001532) dusp3b (ENSPKIG00000001501) SOST (ENSPKIG00000001485) meox1 (ENSPKIG00000001445) etv4 (ENSPKIG00000001383) DHX8 (ENSPKIG00000001290) thraa (ENSPKIG00000001202) ormdl3 (ENSPKIG00000001166) wnt3 (ENSPKIG00000001145) nsfb (ENSPKIG00000001091) psmd11b (ENSPKIG00000001035) #21 cdk5r1b (ENSPKIG00000001019) #22 MYO1D (ENSPKIG00000000999) #23 ENSPKIG00000000976 PDK2 (ENSPKIG00000000931) ENSPKIG00000000901 tbx21 (ENSPKIG00000000866) osbpl7 (ENSPKIG00000000792) mrpl10 (ENSPKIG00000000749) pnpo (ENSPKIG00000000733) prr15la (ENSPKIG00000000717) cdk5rap3 (ENSPKIG00000000684) ENSPKIG00000000651 copz2 (ENSPKIG00000000610) NFE2L1 (ENSPKIG00000000547) skap1 (ENSPKIG00000000481) hoxb1a (ENSPKIG00000000454) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00390000008812.b.b.b #22 Clupeocephala ANCESTRAL SPECIES 812 ENSGT00530000063301.a.a.c.b #21 ENSGT00390000008812.b.b.b #22 Euteleosteomorpha ANCESTRAL SPECIES 159 ENSGT00990000207765 ENSGT00940000158693.A ENSGT00950000183205.b.a.b.a.a ENSGT00390000014700.b.a.b.b.a ENSGT00440000037417.B.a ENSGT00940000158268.b ENSGT00940000160972 ENSGT00940000167194 ENSGT00950000182838.A.a.a ENSGT00940000154700 ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000157917.a.a ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT01100000263614 Protacanthopterygii ANCESTRAL SPECIES 54 ENSGT00940000154664.h.j ENSGT00940000159275.b ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000157917.a.a.b ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.b ENSGT00940000160609.e ENSGT00390000002069 ENSGT00940000166481 ENSGT00940000167630 ENSGT00940000165368 ENSGT00940000167839 ENSGT00940000164903.a.e ENSGT00940000164717.a ENSGT00940000167425 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 25 ENSGT00940000162790.a.u.b.a ENSGT00390000016884 ENSGT00940000160045.w ENSGT00940000154308.A.a.b.a.b.a.b.a ENSGT00550000075140.e ENSGT00980000198723 ENSGT00950000182975.a.b.a.b.e ENSGT00950000182975.a.b.b ENSGT00950000182975.a.b.a.a.h ENSGT00940000153391.c.a ENSGT00940000163377.a.b.b.a.a.b ENSGT00940000163377.a.b.b.a.a.a ENSGT00940000165079.b.a ENSGT00940000158951.f.d ENSGT00530000063301.a.a.c.b.a.a #21 ENSGT00390000008812.b.b.b.a #22 ENSGT00530000064085.d.a ENSGT00940000157917.a.a.b.a ENSGT00990000212733 ENSGT00950000182818.A.p ENSGT00940000164511.C.k.b.a ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f.f ENSGT00940000166981.f ENSGT00950000182841.a.n.a.b ENSGT00940000160609.f.e ENSGT00940000166981.e ENSGT00950000182841.a.n.b ENSGT00940000161135 ENSGT01100000263614.g Salmoninae_a ANCESTRAL SPECIES 60 ENSGT00940000162790.a.u.b.a ENSGT00390000016884 ENSGT00940000160045.w ENSGT01000000220576 ENSGT00940000154308.A.a.b.a.b.a.b.a ENSGT00550000075140.e ENSGT00980000198723 ENSGT00950000182975.a.b.a.b.e ENSGT00950000182975.a.b.b ENSGT00950000182975.a.b.a.a.h ENSGT00940000153391.c.a ENSGT00940000163377.a.b.b.a.a.a ENSGT00940000165079.b.a ENSGT00940000158951.f.d ENSGT00530000063301.a.a.c.b.a.a #21 ENSGT00390000008812.b.b.b.a #22 ENSGT00530000064085.d.a ENSGT00940000157917.a.a.b.a ENSGT00990000212733 ENSGT00950000182818.A.p ENSGT00940000164511.C.k.b.a ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f.f ENSGT00940000166981.f ENSGT00950000182841.a.n.b.a.a ENSGT00940000166981.e.b ENSGT00950000182841.a.n.b.a.b ENSGT00940000161135 ENSGT01100000263614.g ENSGT00940000164903.a.f.a Oncorhynchus ANCESTRAL SPECIES 33 ENSGT00940000165175.b.c ENSGT01050000244941.B.c.b.b ENSGT00940000156233.yb ENSGT00940000162790.a.u.b.a ENSGT00390000016884 ENSGT00940000160045.w ENSGT01000000220576 ENSGT00940000154308.A.a.b.a.b.a.b.a ENSGT00550000075140.e ENSGT00950000182975.a.b.a.a.h ENSGT00940000153391.c.a ENSGT00940000163377.a.b.b.a.a.a ENSGT00940000165079.b.a ENSGT00940000158951.f.d ENSGT00530000063301.a.a.c.b.a.a #21 ENSGT00390000008812.b.b.b.a #22 ENSGT00530000064085.d.a ENSGT00940000157917.a.a.b.a ENSGT00990000212733 ENSGT00950000182818.A.p ENSGT00940000164511.C.k.b.a ENSGT00940000164511.C.l ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f.e ENSGT00940000166981.e.b ENSGT00950000182841.a.n.b.a.b.f ENSGT00950000182841.a.n.b.a.a ENSGT00940000166981.f ENSGT00940000160609.f.f ENSGT00940000161135 Rainbow trout MODERN SPECIES 3 ENSOMYG00000038877 ENSOMYG00000055948 ENSOMYG00000038780 pet100 (ENSOMYG00000038679) stxbp2 (ENSOMYG00000033039) ENSOMYG00000032228 ENSOMYG00000032223 xab2 (ENSOMYG00000030311) ENSOMYG00000026157 nr5a5 (ENSOMYG00000026132) ENSOMYG00000026050 ENSOMYG00000025942 ENSOMYG00000025935 ENSOMYG00000075080 ENSOMYG00000025835 #21 ENSOMYG00000025792 #22 ENSOMYG00000025536 ENSOMYG00000055042 ENSOMYG00000024631 ENSOMYG00000024354 prl (ENSOMYG00000024343) ENSOMYG00000074647 ENSOMYG00000071965 ENSOMYG00000021870 pih1d1 (ENSOMYG00000021516) ENSOMYG00000051568 tnnt1 (ENSOMYG00000021446) syt5a (ENSOMYG00000060679) ENSOMYG00000059960 FRIM (ENSOMYG00000021368) ENSOMYG00000070331 Oncorhynchus_a ANCESTRAL SPECIES 49 ENSGT00940000165175.b.c ENSGT01050000244941.B.c.b.b ENSGT00940000156233.yb ENSGT00940000162790.a.u.b.a ENSGT00390000016884 ENSGT00940000160045.w ENSGT01000000220576 ENSGT00940000154308.A.a.b.a.b.a.b.a ENSGT00550000075140.e ENSGT00950000182975.a.b.a.a.h ENSGT00940000153391.c.a ENSGT00940000163377.a.b.b.a.a.a ENSGT00940000165079.b.a ENSGT00940000158951.f.d ENSGT00530000063301.a.a.c.b.a.a #21 ENSGT00390000008812.b.b.b.a #22 ENSGT00530000064085.d.a ENSGT00940000157917.a.a.b.a ENSGT00990000212733 ENSGT00950000182818.A.p ENSGT00940000164511.C.l ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f.f ENSGT00940000166981.f ENSGT00950000182841.a.n.b.a.a ENSGT00940000161135 ENSGT00940000166981.e.b ENSGT00950000182841.a.n.b.a.b.f ENSGT01100000263614.g ENSGT00940000164903.a.f.a Chinook salmon MODERN SPECIES 33 brd4 (ENSOTSG00005043452) pet100 (ENSOTSG00005043451) stxbp2 (ENSOTSG00005042891) ENSOTSG00005042881 ENSOTSG00005042880 ENSOTSG00005042878 ENSOTSG00005042877 xab2 (ENSOTSG00005042085) ENSOTSG00005042081 ENSOTSG00005042080 nr5a5 (ENSOTSG00005042079) ENSOTSG00005042078 dlx4a (ENSOTSG00005042074) DLX3 (ENSOTSG00005042072) PSMD11 (ENSOTSG00005042061) #21 cdk5r1a (ENSOTSG00005042060) #22 nsfa (ENSOTSG00005034995) THRA (ENSOTSG00005033500) ENSOTSG00005033497 prl (ENSOTSG00005033496) ENSOTSG00005033495 ENSOTSG00005032848 pih1d1 (ENSOTSG00005032825) tnnt1 (ENSOTSG00005032818) syt5a (ENSOTSG00005032817) ENSOTSG00005032816 ENSOTSG00005032788 ENSOTSG00005032787 ENSOTSG00005032786 zgc:193811 (ENSOTSG00005032785) ENSOTSG00005032784 Coho salmon MODERN SPECIES 26 pbx4 (ENSOKIG00005008487) lpar2a (ENSOKIG00005008465) ENSOKIG00005008451 brd4 (ENSOKIG00005008414) pet100 (ENSOKIG00005008401) stxbp2 (ENSOKIG00005003822) ENSOKIG00005003603 ENSOKIG00005003600 xab2 (ENSOKIG00005002776) CAMSAP3 (ENSOKIG00005002620) nr5a5 (ENSOKIG00005002608) ENSOKIG00005002529 dlx4a (ENSOKIG00005002496) DLX3 (ENSOKIG00005002490) PSMD11 (ENSOKIG00005002435) #21 CDK5R1 (ENSOKIG00005002417) #22 nsfa (ENSOKIG00005002310) THRA (ENSOKIG00005001841) ENSOKIG00005001753 prl (ENSOKIG00005001744) ENSOKIG00005001733 ENSOKIG00005001704 ENSOKIG00005036532 ENSOKIG00005036283 ENSOKIG00005036256 pih1d1 (ENSOKIG00005036210) tnnt1 (ENSOKIG00005036186) syt5a (ENSOKIG00005036166) ENSOKIG00005036066 ENSOKIG00005035970 aldh16a1 (ENSOKIG00005035759) Salmo ANCESTRAL SPECIES 28 ENSGT00940000156233.yb ENSGT00940000162790.a.u.b.a ENSGT00390000016884 ENSGT00940000160045.w ENSGT01000000220576 ENSGT00940000154308.A.a.b.a.b.a.b.a ENSGT00550000075140.e ENSGT00980000198723 ENSGT00950000182975.a.b.b ENSGT00950000182975.a.b.a.a.h ENSGT00940000153391.c.a ENSGT00940000163377.a.b.b.a.a.b ENSGT00940000165079.b.a ENSGT00940000158951.f.d ENSGT00530000063301.a.a.c.b.a.a #21 ENSGT00390000008812.b.b.b.a #22 ENSGT00530000064085.d.a ENSGT00940000157917.a.a.b.a ENSGT00990000212733 ENSGT00950000182818.A.o.b ENSGT00950000182818.A.p ENSGT00940000164511.C.k.b.a ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f.f ENSGT00940000166981.e.b ENSGT00950000182841.a.n.b.a.b ENSGT00940000161135 ENSGT01100000263614.g ENSGT00940000164903.a.f.a ENSGT00940000178247.a River trout MODERN SPECIES 25 ENSSTUG00000012408 ENSSTUG00000012399 ENSSTUG00000012319 xab2 (ENSSTUG00000011057) ENSSTUG00000011027 ENSSTUG00000011020 nr5a5 (ENSSTUG00000011016) ENSSTUG00000010924 ENSSTUG00000010740 ENSSTUG00000010551 ENSSTUG00000009433 ENSSTUG00000009294 dlx4a (ENSSTUG00000009283) DLX3 (ENSSTUG00000009275) PSMD11 (ENSSTUG00000009233) #21 cdk5r1a (ENSSTUG00000009230) #22 nsfa (ENSSTUG00000008361) prl (ENSSTUG00000008325) THRA (ENSSTUG00000008217) ENSSTUG00000007993 ENSSTUG00000006113 pih1d1 (ENSSTUG00000006019) tnnt1 (ENSSTUG00000006007) syt5a (ENSSTUG00000005998) ENSSTUG00000005938 ENSSTUG00000005875 ENSSTUG00000005804 aldh16a1 (ENSSTUG00000005636) ENSSTUG00000005608 ENSSTUG00000005602 ENSSTUG00000005580 Atlantic salmon MODERN SPECIES 22 lpar2a (ENSSSAG00000109865) ENSSSAG00000043262 ENSSSAG00000118646 ENSSSAG00000117411 stxbp2 (ENSSSAG00000042439) ENSSSAG00000113439 ENSSSAG00000106818 xab2 (ENSSSAG00000038320) ENSSSAG00000037099 nr5a5 (ENSSSAG00000062963) ENSSSAG00000062926 ENSSSAG00000113207 ENSSSAG00000107946 ENSSSAG00000062915 ENSSSAG00000084100 #21 ENSSSAG00000121832 #22 nsf (ENSSSAG00000058975) tr-alpha (ENSSSAG00000102595) ENSSSAG00000057732 prl (ENSSSAG00000057719) ENSSSAG00000057340 ENSSSAG00000009307 pih1d1 (ENSSSAG00000008498) tnnt1 (ENSSSAG00000008475) syt5a (ENSSSAG00000008464) ENSSSAG00000008219 ENSSSAG00000004738 ENSSSAG00000008351 ENSSSAG00000090829 ENSSSAG00000115391 ENSSSAG00000008263 Huchen MODERN SPECIES 470 pbx4 (ENSHHUG00000050215) lpar2a (ENSHHUG00000050208) ENSHHUG00000050190 brd4 (ENSHHUG00000050176) pet100 (ENSHHUG00000050171) stxbp2 (ENSHHUG00000050124) ENSHHUG00000050120 xab2 (ENSHHUG00000050042) CAMSAP3 (ENSHHUG00000050001) nr5a5 (ENSHHUG00000049995) ENSHHUG00000049953 ENSHHUG00000049939 dlx4a (ENSHHUG00000049934) ENSHHUG00000049931 PSMD11 (ENSHHUG00000049866) #21 cdk5r1a (ENSHHUG00000049855) #22 nsfa (ENSHHUG00000049779) THRA (ENSHHUG00000048806) ENSHHUG00000048801 prl (ENSHHUG00000048750) ENSHHUG00000048744 Salmoninae ANCESTRAL SPECIES 767 ENSGT00940000163377.a.b.b.a.b ENSGT00940000165079.b.b ENSGT00940000158951.f.c ENSGT00530000063301.a.a.c.b.a.b #21 ENSGT00390000008812.b.b.b.b #22 ENSGT00530000064085.d.b ENSGT00940000157917.a.a.b.b ENSGT00940000162682.B.b ENSGT00950000182818.A.o ENSGT00940000164511.C.k.b.b Salmoninae_a ANCESTRAL SPECIES 120 ENSGT00390000006617.f ENSGT00390000003337.f.b ENSGT00390000007652.c ENSGT00940000153496.a.a.r.a ENSGT00940000153496.a.a.r.b.a ENSGT01030000234629.E.a.b.c ENSGT00550000074873.ob.a.a.b.b ENSGT00390000002810.l ENSGT00950000183143.c.b.m ENSGT00940000160492.f ENSGT00940000159252.b.b.b ENSGT00940000163377.a.b.b.a.b ENSGT00940000165079.b.b ENSGT00940000158951.f.c ENSGT00530000063301.a.a.c.b.a.b #21 ENSGT00390000008812.b.b.b.b #22 ENSGT00530000064085.d.b ENSGT00940000157917.a.a.b.b ENSGT00940000162682.B.b ENSGT00950000182818.A.o.a ENSGT00940000164511.C.k.b.b ENSGT00940000160609.f.e ENSGT00940000166981.e.a ENSGT00950000182841.a.m.b Salmo ANCESTRAL SPECIES 64 ENSGT01030000234586.A.a.a.b.h ENSGT00390000006617.f ENSGT00390000003337.f.b ENSGT00390000007652.c ENSGT00940000153496.a.a.r.a ENSGT01030000234629.E.a.b.c ENSGT00550000074873.ob.a.a.b.b ENSGT00390000002810.l ENSGT00950000183143.c.b.m ENSGT00940000160492.f ENSGT00940000159252.b.b.b ENSGT00940000163377.a.b.b.a.b ENSGT00940000165079.b.b ENSGT00940000158951.f.c ENSGT00530000063301.a.a.c.b.a.b #21 ENSGT00390000008812.b.b.b.b #22 ENSGT00530000064085.d.b ENSGT00940000157917.a.a.b.b ENSGT00940000162682.B.b ENSGT00950000182818.A.o.a ENSGT00940000164511.C.k.b.b ENSGT00940000160609.f.e ENSGT00940000166981.e.a Atlantic salmon MODERN SPECIES 15 ENSSSAG00000105245 tmem11 (ENSSSAG00000000270) ENSSSAG00000061415 jpt2 (ENSSSAG00000095240) mapk8ip3 (ENSSSAG00000053437) ENSSSAG00000114586 ENSSSAG00000095306 ENSSSAG00000106267 ENSSSAG00000102969 ENSSSAG00000052647 ENSSSAG00000045889 ENSSSAG00000045730 HEBP2 (ENSSSAG00000045682) ENSSSAG00000082098 ENSSSAG00000120584 #21 ENSSSAG00000083996 #22 ENSSSAG00000041588 ENSSSAG00000102800 ENSSSAG00000057762 ENSSSAG00000088009 ENSSSAG00000031162 ENSSSAG00000034084 ENSSSAG00000065652 ENSSSAG00000015328 ENSSSAG00000031377 River trout MODERN SPECIES 33 CRAMP1 (ENSSTUG00000029545) jpt2 (ENSSTUG00000029523) mapk8ip3 (ENSSTUG00000029202) spsb3a (ENSSTUG00000029182) ATP6V0C (ENSSTUG00000029160) ENSSTUG00000029153 xpo6 (ENSSTUG00000027955) kctd13 (ENSSTUG00000027924) SEZ6L2 (ENSSTUG00000027824) ENSSTUG00000027813 ENSSTUG00000027796 ENSSTUG00000027742 dlx4a (ENSSTUG00000027729) DLX3 (ENSSTUG00000027720) PSMD11 (ENSSTUG00000027628) #21 cdk5r1a (ENSSTUG00000027621) #22 nsfa (ENSSTUG00000025460) THRA (ENSSTUG00000025312) dusp3b (ENSSTUG00000025300) prl (ENSSTUG00000025286) ENSSTUG00000024119 ENSSTUG00000024016 tnnt1 (ENSSTUG00000023957) syt5a (ENSSTUG00000023918) ENSSTUG00000023865 ENSSTUG00000023852 ENSSTUG00000023848 dnaja1 (ENSSTUG00000023788) ENSSTUG00000023560 rps6 (ENSSTUG00000023472) tspan5b (ENSSTUG00000023336) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154700.f ENSGT00940000180096.a ENSGT01030000234586.A.a.a.b.h ENSGT00940000158837.g.b.b ENSGT00390000006617.f ENSGT00390000003337.f.b ENSGT00390000007652.c ENSGT00940000153496.a.a.r.b.a ENSGT01030000234629.E.a.b.c ENSGT00550000074873.ob.a.a.b.b ENSGT00940000160492.f ENSGT00940000163377.a.b.b.a.b ENSGT00940000165079.b.b ENSGT00940000158951.f.c ENSGT00530000063301.a.a.c.b.a.b #21 ENSGT00390000008812.b.b.b.b #22 ENSGT00530000064085.d.b ENSGT00940000157917.a.a.b.b ENSGT00940000162682.B.b ENSGT00950000182818.A.o.b ENSGT00950000182818.A.o.a ENSGT00940000164511.C.k.b.b ENSGT00940000166981.e.a ENSGT00950000182841.a.m.b Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154700.f ENSGT00940000180096.a ENSGT01030000234586.A.a.a.b.h ENSGT00940000158837.g.b.b ENSGT00390000006617.f ENSGT00390000003337.f.b ENSGT00390000007652.c ENSGT00940000153496.a.a.r.b.a ENSGT01030000234629.E.a.b.c ENSGT00550000074873.ob.a.a.b.b ENSGT00940000160492.f ENSGT00940000163377.a.b.b.a.b ENSGT00940000165079.b.b ENSGT00940000158951.f.c ENSGT00530000063301.a.a.c.b.a.b #21 ENSGT00390000008812.b.b.b.b #22 ENSGT00530000064085.d.b ENSGT00940000157917.a.a.b.b ENSGT00940000162682.B.b ENSGT00950000182818.A.o.a ENSGT00940000164511.C.k.b.b ENSGT00940000160609.f.e ENSGT00940000166981.e.a ENSGT00950000182841.a.m.b Coho salmon MODERN SPECIES 1 prmt1 (ENSOKIG00005026770) ENSOKIG00005029316 ENSOKIG00005029333 ENSOKIG00005029359 tmem11 (ENSOKIG00005029724) CRAMP1 (ENSOKIG00005029739) jpt2 (ENSOKIG00005029781) ENSOKIG00005029815 mapk8ip3 (ENSOKIG00005029868) SPSB3 (ENSOKIG00005030546) SEZ6L2 (ENSOKIG00005030576) ENSOKIG00005030686 ENSOKIG00005030742 DLX3 (ENSOKIG00005030773) PSMD11 (ENSOKIG00005030783) #21 CDK5R1 (ENSOKIG00005030823) #22 NSF (ENSOKIG00005030932) THRA (ENSOKIG00005032167) dusp3b (ENSOKIG00005032411) ENSOKIG00005032418 ENSOKIG00005032442 ENSOKIG00005032481 ENSOKIG00005032824 ENSOKIG00005032994 XAB2 (ENSOKIG00005033079) ENSOKIG00005034389 STXBP2 (ENSOKIG00005034430) ENSOKIG00005034693 ENSOKIG00005034731 pbx4 (ENSOKIG00005034919) atp13a1 (ENSOKIG00005035082) Chinook salmon MODERN SPECIES AP2A1 (ENSOTSG00005007807) prmt1 (ENSOTSG00005008317) ENSOTSG00005009346 ENSOTSG00005009356 ENSOTSG00005009357 tmem11 (ENSOTSG00005009371) CRAMP1 (ENSOTSG00005009373) mapk8ip3 (ENSOTSG00005009375) spsb3a (ENSOTSG00005009412) ATP6V0C (ENSOTSG00005009413) SEZ6L2 (ENSOTSG00005009418) ENSOTSG00005009594 dlx4a (ENSOTSG00005009595) DLX3 (ENSOTSG00005009596) PSMD11 (ENSOTSG00005009598) #21 cdk5r1a (ENSOTSG00005009599) #22 nsfa (ENSOTSG00005009601) THRA (ENSOTSG00005009816) dusp3b (ENSOTSG00005010730) prl2 (ENSOTSG00005010731) ENSOTSG00005010733 tnnt1 (ENSOTSG00005010747) syt5a (ENSOTSG00005010748) ENSOTSG00005010749 ENSOTSG00005010751 SRF (ENSOTSG00005010753) ENSOTSG00005010754 ENSOTSG00005010755 sprn (ENSOTSG00005010756) ENSOTSG00005010757 drgx (ENSOTSG00005010758) Rainbow trout MODERN SPECIES 22 ENSOMYG00000046434 tmem11 (ENSOMYG00000046436) ENSOMYG00000046444 jpt2 (ENSOMYG00000046462) mapk8ip3 (ENSOMYG00000046505) ENSOMYG00000057237 ENSOMYG00000046560 ENSOMYG00000046565 ENSOMYG00000046626 ENSOMYG00000046695 ENSOMYG00000046697 ENSOMYG00000046701 ENSOMYG00000046708 #21 ENSOMYG00000051375 ENSOMYG00000053810 ENSOMYG00000063379 #22 ENSOMYG00000046756 ENSOMYG00000046850 ENSOMYG00000053599 ENSOMYG00000046919 ENSOMYG00000046921 ENSOMYG00000071216 ENSOMYG00000046940 ENSOMYG00000021406 Huchen MODERN SPECIES 747 ENSHHUG00000000558 pbx4 (ENSHHUG00000000554) LPAR2 (ENSHHUG00000000521) brd4 (ENSHHUG00000000493) stxbp2 (ENSHHUG00000000034) xab2 (ENSHHUG00000030223) CAMSAP3 (ENSHHUG00000030210) ENSHHUG00000030163 dlx4a (ENSHHUG00000030161) DLX3 (ENSHHUG00000030155) PSMD11 (ENSHHUG00000030057) #21 cdk5r1a (ENSHHUG00000030043) #22 nsfa (ENSHHUG00000029008) Northern pike MODERN SPECIES 10 ENSELUG00000023127 ENSELUG00000008834 ENSELUG00000031100 ALDOA (ENSELUG00000022947) ENSELUG00000000981 ENSELUG00000026558 ENSELUG00000022853 ENSELUG00000022824 cln3 (ENSELUG00000022817) PPP4C (ENSELUG00000022771) ENSELUG00000026605 ENSELUG00000028527 dlx4a (ENSELUG00000022662) DLX3 (ENSELUG00000001505) PSMD11 (ENSELUG00000022637) #21 ENSELUG00000021322 #22 nsfa (ENSELUG00000022546) THRA (ENSELUG00000022367) DUSP3 (ENSELUG00000022276) prl (ENSELUG00000022249) ENSELUG00000001624 ENSELUG00000031307 ENSELUG00000022166 ENSELUG00000029483 ENSELUG00000026431 ENSELUG00000033764 ENSELUG00000028506 pih1d1 (ENSELUG00000000327) tnnt1 (ENSELUG00000008433) tnnt1 (ENSELUG00000025633) syt5a (ENSELUG00000008376) Acanthomorphata ANCESTRAL SPECIES 232 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 Euacanthomorphacea ANCESTRAL SPECIES 118 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 Pinecone sodierfish MODERN SPECIES 22 ENSMMDG00005002427 clcn7 (ENSMMDG00005002459) ENSMMDG00005003103 arhgdig (ENSMMDG00005003106) ENSMMDG00005003111 dnase1 (ENSMMDG00005003124) eci1 (ENSMMDG00005003170) ENSMMDG00005003202 ENSMMDG00005003508 nat15 (ENSMMDG00005003510) carhsp1 (ENSMMDG00005003511) ENSMMDG00005003513 DLX3 (ENSMMDG00005003519) PSMD11 (ENSMMDG00005003557) #21 rpain (ENSMMDG00005003583) cdk5r1a (ENSMMDG00005003592) #22 nsfa (ENSMMDG00005003684) THRA (ENSMMDG00005004347) DUSP3 (ENSMMDG00005005625) ENSMMDG00005005628 prl (ENSMMDG00005005630) ENSMMDG00005005633 ENSMMDG00005005640 ENSMMDG00005005749 pih1d1 (ENSMMDG00005009877) tnnt1 (ENSMMDG00005009881) syt5a (ENSMMDG00005009885) fthl31 (ENSMMDG00005009892) aldh16a1 (ENSMMDG00005009914) ENSMMDG00005009940 ENSMMDG00005009946 Percomorphaceae ANCESTRAL SPECIES 3 ENSGT00940000160643.i ENSGT00940000168246 ENSGT00940000159997 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000174909 ENSGT00940000156584.e.b ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Tiger tail seahorse MODERN SPECIES 338 ENSHCOG00000010355 hao1 (ENSHCOG00000010339) lin7b (ENSHCOG00000010299) snrnp70 (ENSHCOG00000010270) ENSHCOG00000010253 ABCC1 (ENSHCOG00000010243) fbxl16 (ENSHCOG00000010182) smg1 (ENSHCOG00000010132) col1a1a (ENSHCOG00000000752) ENSHCOG00000009867 nags (ENSHCOG00000009836) ENSHCOG00000000580 DLX3 (ENSHCOG00000009721) PSMD11 (ENSHCOG00000009712) #21 rpain (ENSHCOG00000009690) cdk5r1a (ENSHCOG00000009684) #22 nsfa (ENSHCOG00000009674) Percomorphaceae_B ANCESTRAL SPECIES 2 ENSGT00940000159997 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Ovalentaria ANCESTRAL SPECIES 1 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Atherinomorphae ANCESTRAL SPECIES 25 ENSGT00940000155223.a.a ENSGT00390000004690.a.a ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000160643.i ENSGT00940000168246 ENSGT00940000163460.a.a.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Cyprinodontiformes ANCESTRAL SPECIES 3 ENSGT00940000163460.a.a.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Aplocheiloidei ANCESTRAL SPECIES 272 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b Mangrove rivulus MODERN SPECIES 249 dlx4a (ENSKMAG00000013682) DLX3 (ENSKMAG00000013672) PSMD11 (ENSKMAG00000013540) #21 rpain (ENSKMAG00000013511) cdk5r1a (ENSKMAG00000013498) #22 nsfa (ENSKMAG00000013366) thraa (ENSKMAG00000013299) GAL3ST2 (ENSKMAG00000013266) ENSKMAG00000013256 ENSKMAG00000013200 dusp3b (ENSKMAG00000013170) ENSKMAG00000013158 ENSKMAG00000013145 prl (ENSKMAG00000013086) si:dkey-16p21.8 (ENSKMAG00000013074) ENSKMAG00000012989 ENSKMAG00000012959 ENSKMAG00000012947 Turquoise killifish MODERN SPECIES 1612 RPSA (ENSNFUG00015001374) slc25a38a (ENSNFUG00015001388) MYH9 (ENSNFUG00015001458) ENSNFUG00015001716 TXN2 (ENSNFUG00015001719) ENSNFUG00015001721 DDX39A (ENSNFUG00015001735) Nfu_g_1_019756 (ENSNFUG00015001794) ENSNFUG00015001798 ENG (ENSNFUG00015001805) ENSNFUG00015002027 ENSNFUG00015002031 DLX3 (ENSNFUG00015002037) PSMD11 (ENSNFUG00015002058) #21 RPAIN (ENSNFUG00015002100) CDK5R1 (ENSNFUG00015002104) #22 NSFA (ENSNFUG00015002129) thraa (ENSNFUG00015002280) dusp3b (ENSNFUG00015002412) ENSNFUG00015002413 tnnt1 (ENSNFUG00015002416) syt5a (ENSNFUG00015002424) ENSNFUG00015002428 FTL (ENSNFUG00015002448) ALDH16A1 (ENSNFUG00015002487) ENSNFUG00015002552 Nfu_g_1_019576 (ENSNFUG00015002624) ENSNFUG00015002648 eci1 (ENSNFUG00015002710) dnase1 (ENSNFUG00015002715) nat15 (ENSNFUG00015002723) Cyprinodontoidei ANCESTRAL SPECIES 22 ENSGT00940000163460.a.a.b.c.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00950000182841.a.o.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b Poeciliinae ANCESTRAL SPECIES 1 ENSGT00940000156505.t ENSGT00390000017136 ENSGT00940000171636 ENSGT00390000007164 ENSGT00940000156435 ENSGT00940000153578.B ENSGT00940000164817 ENSGT00940000163460.a.a.b.c.a ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00950000182841.a.o.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b Poecilia ANCESTRAL SPECIES 18 ENSGT00390000017136 ENSGT00940000171636 ENSGT00390000007164 ENSGT00940000156435 ENSGT00940000153578.B ENSGT00940000164817 ENSGT00940000163460.a.a.b.c.a.a ENSGT00940000163460.a.a.b.c.a.b ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00950000182841.a.o.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b NAME_6 ANCESTRAL SPECIES 146 ENSGT00940000171636 ENSGT00390000007164 ENSGT00940000156435 ENSGT00940000153578.B ENSGT00940000164817 ENSGT00940000163460.a.a.b.c.a.a ENSGT00940000163460.a.a.b.c.a.b ENSGT00940000163460.a.a.b.c.b.b ENSGT00940000177154.e ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a Amazon molly MODERN SPECIES 470 GNA13 (ENSPFOG00000015068) rgs9a (ENSPFOG00000014989) COG1 (ENSPFOG00000014872) glyr1 (ENSPFOG00000014804) ppl (ENSPFOG00000014679) ENSPFOG00000014593 ENSPFOG00000022331 ENSPFOG00000014565 ENSPFOG00000014563 ENSPFOG00000014546 nags (ENSPFOG00000014497) ENSPFOG00000014479 DLX3 (ENSPFOG00000014463) PSMD11 (ENSPFOG00000014420) #21 rpain (ENSPFOG00000014385) CDK5R1 (ENSPFOG00000014375) #22 nsfa (ENSPFOG00000014187) thraa (ENSPFOG00000014136) dusp3b (ENSPFOG00000014124) prl (ENSPFOG00000014103) ENSPFOG00000013976 ENSPFOG00000013670 ENSPFOG00000013658 Sailfin molly MODERN SPECIES 795 ENSPLAG00000016466 ENSPLAG00000016520 PSMD11 (ENSPLAG00000016554) #21 rpain (ENSPLAG00000016565) CDK5R1 (ENSPLAG00000016575) #22 nsfa (ENSPLAG00000016623) Guppy MODERN SPECIES 460 ENSPREG00000011491 rogdi (ENSPREG00000011501) glyr1 (ENSPREG00000011531) ppl (ENSPREG00000011553) ENSPREG00000011590 ENSPREG00000011637 cbln10 (ENSPREG00000011645) ENSPREG00000011660 ENSPREG00000011672 coa3b (ENSPREG00000011679) nags (ENSPREG00000011693) ENSPREG00000011713 ENSPREG00000011723 PSMD11 (ENSPREG00000011747) #21 rpain (ENSPREG00000011787) CDK5R1 (ENSPREG00000011818) #22 nsfa (ENSPREG00000011863) thraa (ENSPREG00000011986) dusp3b (ENSPREG00000012040) prl (ENSPREG00000012058) si:dkey-16p21.8 (ENSPREG00000012071) ENSPREG00000012086 ENSPREG00000012125 ENSPREG00000012140 ENSPREG00000012179 pih1d1 (ENSPREG00000012193) tnnt1 (ENSPREG00000012247) syt5a (ENSPREG00000012368) ENSPREG00000012446 aldh16a1 (ENSPREG00000012471) ENSPREG00000012532 Platyfish MODERN SPECIES 7 ENSXMAG00000021006 rogdi (ENSXMAG00000007200) glyr1 (ENSXMAG00000015002) ppl (ENSXMAG00000014943) ENSXMAG00000021747 ENSXMAG00000007211 ENSXMAG00000026028 ENSXMAG00000022744 ENSXMAG00000028747 coa3b (ENSXMAG00000025633) nags (ENSXMAG00000013316) ENSXMAG00000021845 DLX3 (ENSXMAG00000010690) PSMD11 (ENSXMAG00000010693) #21 rpain (ENSXMAG00000010808) cdk5r1a (ENSXMAG00000010811) #22 ENSXMAG00000025449 nsfa (ENSXMAG00000010812) ENSXMAG00000028514 thraa (ENSXMAG00000010829) dusp3b (ENSXMAG00000028844) prl (ENSXMAG00000010841) si:dkey-16p21.8 (ENSXMAG00000020973) ENSXMAG00000010845 ENSXMAG00000010850 pih1d1 (ENSXMAG00000008571) tnnt1 (ENSXMAG00000008583) syt5a (ENSXMAG00000018006) ENSXMAG00000028409 ENSXMAG00000022350 ENSXMAG00000008596 NAME_4 ANCESTRAL SPECIES 292 ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a Mummichog MODERN SPECIES 344 coa3b (ENSFHEG00000016626) nags (ENSFHEG00000016620) ENSFHEG00000016599 DLX3 (ENSFHEG00000016572) PSMD11 (ENSFHEG00000016537) #21 rpain (ENSFHEG00000016471) CDK5R1 (ENSFHEG00000016446) #22 nsfa (ENSFHEG00000016431) thraa (ENSFHEG00000016382) prl (ENSFHEG00000016360) si:dkey-16p21.8 (ENSFHEG00000016345) ENSFHEG00000016320 ENSFHEG00000016263 Sheepshead minnow MODERN SPECIES 1260 rpain (ENSCVAG00000011939) CDK5R1 (ENSCVAG00000011924) #22 nsfa (ENSCVAG00000011917) thraa (ENSCVAG00000011840) Oryzias ANCESTRAL SPECIES ENSGT00390000018717.b.a.a ENSGT00390000004690.a.a ENSGT01030000234606.a.b.i.a ENSGT00990000204611.c ENSGT00390000018541 ENSGT00390000010157.b ENSGT00510000048539 ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000153578.B ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d Oryzias_a ANCESTRAL SPECIES 104 ENSGT00390000018717.b.a.a ENSGT00390000004690.a.a ENSGT01030000234606.a.b.i.a ENSGT00990000204611.c ENSGT00390000018541 ENSGT00390000010157.b ENSGT00510000048539 ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000153578.B ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d Japanese Medaka HdrR MODERN SPECIES 22 timm29 (ENSORLG00000019592) yipf2 (ENSORLG00000019602) mettl22 (ENSORLG00000025302) ENSORLG00000025492 ENSORLG00000023559 ENSORLG00000023639 smarce1 (ENSORLG00000018629) ENSORLG00000018666 mpp2a (ENSORLG00000018697) ppl (ENSORLG00000018743) ENSORLG00000028318 nags (ENSORLG00000018756) ENSORLG00000022293 ENSORLG00000018831 #21 ENSORLG00000025977 ENSORLG00000018877 #22 ENSORLG00000023908 NSF (ENSORLG00000018913) pdxdc1 (ENSORLG00000018963) ENSORLG00000026353 gspt1l (ENSORLG00000026597) RRN3 (ENSORLG00000026398) ENSORLG00000029125 ENSORLG00000025514 ENSORLG00000023217 ENSORLG00000025261 actr10 (ENSORLG00000017497) aoc2 (ENSORLG00000017488) gps1 (ENSORLG00000017478) ENSORLG00000017463 ENSORLG00000017454 Chinese medaka MODERN SPECIES 4000 CDK5R1 (ENSOSIG00000013406) #22 Oryzias_b ANCESTRAL SPECIES 43 ENSGT00940000158310 ENSGT00940000159138 ENSGT00940000154776 ENSGT00390000018717.b.a.a ENSGT00390000004690.a.a ENSGT01030000234606.a.b.i.a ENSGT00990000204611.c ENSGT00390000018541 ENSGT00510000048539 ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000153578.B ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d Javanese ricefish MODERN SPECIES 11 fbxl16 (ENSOJAG00000002075) ENSOJAG00000002121 hao1 (ENSOJAG00000002416) rpl23 (ENSOJAG00000002432) ENSOJAG00000002469 ENSOJAG00000002499 ENSOJAG00000002509 timm29 (ENSOJAG00000002517) yipf2 (ENSOJAG00000002524) mettl22 (ENSOJAG00000002545) ENSOJAG00000002557 smarce1 (ENSOJAG00000002581) ENSOJAG00000002654 mpp2a (ENSOJAG00000002847) nags (ENSOJAG00000002969) CDK5R1 (ENSOJAG00000002994) #22 nsfa (ENSOJAG00000003048) SOX1 (ENSOJAG00000003234) ENSOJAG00000003544 ENSOJAG00000004002 unc50 (ENSOJAG00000004033) ENSOJAG00000004592 creb3l1 (ENSOJAG00000004635) atg13 (ENSOJAG00000004745) kpnb3 (ENSOJAG00000004960) ENSOJAG00000005024 zgc:172122 (ENSOJAG00000005034) ENSOJAG00000005053 u2af1 (ENSOJAG00000005070) cbsa (ENSOJAG00000005110) ENSOJAG00000005689 Indian medaka MODERN SPECIES 736 ENSOMEG00000011878 ENSOMEG00000011865 rpain (ENSOMEG00000011839) CDK5R1 (ENSOMEG00000011807) #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b.n ENSGT01100000263513.a.a.b.b.b.b.b.a.b.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Pomacentridae ANCESTRAL SPECIES 138 ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Pomacentridae_A ANCESTRAL SPECIES 21 ENSGT00940000158951.f ENSGT00940000165079.b ENSGT00390000005602 ENSGT00390000006679.b.m ENSGT00940000173491 ENSGT00940000156584.e.b ENSGT00940000155311.A.a ENSGT00390000016209 ENSGT00940000160534 ENSGT00950000183197.a ENSGT00940000156447.a.b ENSGT00950000182995.e.a.b ENSGT00940000165576.a.b ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Amphiprion ANCESTRAL SPECIES 25 ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Clown anemonefish MODERN SPECIES 663 PSMD11 (ENSAOCG00000017105) #21 rpain (ENSAOCG00000017141) CDK5R1 (ENSAOCG00000017165) #22 nsfa (ENSAOCG00000017242) thraa (ENSAOCG00000001207) Orange clownfish MODERN SPECIES 5 pyya (ENSAPEG00000020549) ENSAPEG00000020542 DLX3 (ENSAPEG00000020512) dlx4a (ENSAPEG00000020469) nags (ENSAPEG00000020385) col1a1a (ENSAPEG00000020275) ENSAPEG00000020252 pex12 (ENSAPEG00000020244) HDAC5 (ENSAPEG00000020144) cyb561 (ENSAPEG00000020038) TANC2 (ENSAPEG00000019908) ENSAPEG00000019752 RARA (ENSAPEG00000019710) PSMD11 (ENSAPEG00000019666) #21 rpain (ENSAPEG00000019626) CDK5R1 (ENSAPEG00000019609) #22 nsfa (ENSAPEG00000019522) ENSAPEG00000019508 thraa (ENSAPEG00000019490) DUSP3 (ENSAPEG00000019455) prl (ENSAPEG00000019442) si:dkey-16p21.8 (ENSAPEG00000019433) ENSAPEG00000019391 ENSAPEG00000019296 pih1d1 (ENSAPEG00000019265) tnnt1 (ENSAPEG00000019209) syt5a (ENSAPEG00000019178) fthl31 (ENSAPEG00000019099) aldh16a1 (ENSAPEG00000019025) ENSAPEG00000018975 ENSAPEG00000018965 Spiny chromis MODERN SPECIES 404 ENSAPOG00000020604 rarab (ENSAPOG00000020619) PSMD11 (ENSAPOG00000020650) #21 rpain (ENSAPOG00000020690) CDK5R1 (ENSAPOG00000020705) #22 nsfa (ENSAPOG00000020820) THRA (ENSAPOG00000020876) DUSP3 (ENSAPOG00000020913) prl (ENSAPOG00000020947) si:dkey-16p21.8 (ENSAPOG00000020971) ENSAPOG00000020992 Bicolor damselfish MODERN SPECIES 560 rarab (ENSSPAG00000017572) PSMD11 (ENSSPAG00000017531) #21 rpain (ENSSPAG00000017505) cdk5r1a (ENSSPAG00000017493) #22 nsfa (ENSSPAG00000017457) thraa (ENSSPAG00000017419) ENSSPAG00000017405 prl (ENSSPAG00000017391) si:dkey-16p21.8 (ENSSPAG00000017379) ENSSPAG00000017312 ENSSPAG00000017273 pih1d1 (ENSSPAG00000017242) tnnt1 (ENSSPAG00000017196) syt5a (ENSSPAG00000017166) Cichlidae ANCESTRAL SPECIES 19 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000177241 ENSGT00940000174883.h ENSGT00940000166007.c.a.a.b ENSGT00980000198722.b ENSGT00940000156584.e.b ENSGT00970000198135 ENSGT00390000006679.b.m ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.p ENSGT00950000182841.a.o.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b ENSGT00390000008314 ENSGT00390000000022.a ENSGT00940000158833.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 1 ENSGT00950000182995.e.a.b ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00940000177154.d ENSGT00390000006679.b.m.a ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00950000182818.A.s ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT01060000248575.D.c.b.b.a.l ENSGT00950000182841.a.o.a.c.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Pseudocrenilabrinae_A ANCESTRAL SPECIES 38 ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00390000006679.b.n.a.a ENSGT00940000173491 ENSGT00390000006679.b.n.b.a ENSGT00390000006679.b.n.a.b ENSGT00390000006679.b.m.a ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A.t ENSGT00950000182818.A.s ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT01060000248575.D.c.b.b.a.l ENSGT00950000182841.a.o.a.c.a ENSGT00950000182917.a.b.b ENSGT00390000013719 ENSGT00950000182916.a.b.a.a.a.b.a.b Haplochromini ANCESTRAL SPECIES 57 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00390000006679.b.n.a.a ENSGT00940000177154.c ENSGT00940000173491 ENSGT00390000006679.b.n.b.a ENSGT00390000006679.b.n.a.b ENSGT00390000006679.b.m.a ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A.t ENSGT00950000182818.A.s ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT01060000248575.D.c.b.b.a.l ENSGT00950000182841.a.o.a.c.a.a ENSGT00950000182917.a.b.b ENSGT00390000013719 ENSGT00950000182916.a.b.a.a.a.b.a.b Haplochromini_A ANCESTRAL SPECIES 43 ENSGT00940000174883.h ENSGT00940000177241 ENSGT01060000249103 ENSGT00940000156584.e.b ENSGT00390000006679.b.n.a.a ENSGT00940000177154.c ENSGT00940000173491 ENSGT00390000006679.b.n.b.a ENSGT00940000179732 ENSGT00390000006679.b.m.a ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A.t ENSGT00950000182818.A.s ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT01060000248575.D.c.b.b.a.l ENSGT00950000182917.a.b.b ENSGT00390000013719 ENSGT00950000182916.a.b.a.a.a.b.a.b ENSGT00390000012078.a.b.i P. nyererei MODERN SPECIES 589 nags (ENSPNYG00000019192) ENSPNYG00000019206 DLX3 (ENSPNYG00000019215) PSMD11 (ENSPNYG00000019232) #21 rpain (ENSPNYG00000019275) cdk5r1a (ENSPNYG00000019291) #22 nsfa (ENSPNYG00000019302) thraa (ENSPNYG00000019352) dusp3b (ENSPNYG00000019374) prl (ENSPNYG00000019398) prl (ENSPNYG00000019408) si:dkey-16p21.8 (ENSPNYG00000019417) ENSPNYG00000019432 ENSPNYG00000019485 Haplochromini_B ANCESTRAL SPECIES 31 ENSGT00940000177241 ENSGT01060000249103 ENSGT00940000156584.e.b ENSGT00390000006679.b.n.a.a ENSGT00940000177154.c ENSGT00940000173491 ENSGT00390000006679.b.n.b.a ENSGT00940000179732 ENSGT00390000006679.b.n.a.b ENSGT00390000006679.b.m.a ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A.t ENSGT00950000182818.A.s ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a.b ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT01060000248575.D.c.b.b.a.l ENSGT00950000182841.a.o.a.c.a.a.a.a ENSGT00950000182841.a.o.a.c.a.a.a.b ENSGT00950000182917.a.b.b ENSGT00390000013719 Zebra mbuna MODERN SPECIES 1107 ENSMZEG00005018710 ENSMZEG00005018714 ENSMZEG00005018716 col1a1a (ENSMZEG00005018722) ENSMZEG00005018731 ENSMZEG00005018733 coa3b (ENSMZEG00005018739) ENSMZEG00005018746 ENSMZEG00005018760 ENSMZEG00005018763 ENSMZEG00005018765 ENSMZEG00005018769 nags (ENSMZEG00005018774) ENSMZEG00005018781 DLX3 (ENSMZEG00005018784) cdk5r1a (ENSMZEG00005018790) #22 PSMD11 (ENSMZEG00005018796) #21 rpain (ENSMZEG00005018807) nsfa (ENSMZEG00005018814) thraa (ENSMZEG00005018835) dusp3b (ENSMZEG00005018840) prl (ENSMZEG00005018843) prl (ENSMZEG00005018848) si:dkey-16p21.8 (ENSMZEG00005018855) ENSMZEG00005018859 ENSMZEG00005018971 ENSMZEG00005022667 ENSMZEG00005022671 ENSMZEG00005022675 ENSMZEG00005022677 ENSMZEG00005022683 Eastern happy MODERN SPECIES 16 ENSACLG00000006468 ENSACLG00000006866 coa3b (ENSACLG00000006868) ENSACLG00000006873 ENSACLG00000006944 ENSACLG00000006948 ENSACLG00000006958 ENSACLG00000006968 ENSACLG00000006981 ENSACLG00000006986 nags (ENSACLG00000007000) ENSACLG00000007015 DLX3 (ENSACLG00000007018) PSMD11 (ENSACLG00000007023) #21 rpain (ENSACLG00000007056) cdk5r1a (ENSACLG00000007067) #22 nsfa (ENSACLG00000007069) thraa (ENSACLG00000007247) dusp3b (ENSACLG00000007299) ENSACLG00000007318 prl (ENSACLG00000007323) prl (ENSACLG00000007341) si:dkey-16p21.8 (ENSACLG00000007348) ENSACLG00000007357 ENSACLG00000007398 ENSACLG00000007402 ENSACLG00000008067 ENSACLG00000008092 ENSACLG00000008095 ENSACLG00000008105 pih1d1 (ENSACLG00000008577) Burton s mouthbrooder MODERN SPECIES 633 dlx4a (ENSHBUG00000009402) DLX3 (ENSHBUG00000009425) PSMD11 (ENSHBUG00000009457) #21 rpain (ENSHBUG00000009479) cdk5r1a (ENSHBUG00000009502) #22 nsfa (ENSHBUG00000009607) thraa (ENSHBUG00000009639) dusp3b (ENSHBUG00000009667) prl (ENSHBUG00000009682) prl (ENSHBUG00000009708) si:dkey-16p21.8 (ENSHBUG00000009726) ENSHBUG00000009782 ENSHBUG00000009891 Lyretail cichlid MODERN SPECIES 424 ENSNBRG00000015267 nags (ENSNBRG00000015229) ENSNBRG00000015209 DLX3 (ENSNBRG00000015183) PSMD11 (ENSNBRG00000015159) #21 rpain (ENSNBRG00000015144) cdk5r1a (ENSNBRG00000015130) #22 nsfa (ENSNBRG00000014850) thraa (ENSNBRG00000013365) dusp3b (ENSNBRG00000013098) prl (ENSNBRG00000012705) prl (ENSNBRG00000012633) si:dkey-16p21.8 (ENSNBRG00000012621) ENSNBRG00000012571 ENSNBRG00000012560 ENSNBRG00000012528 tnnt1 (ENSNBRG00000012511) syt5a (ENSNBRG00000012503) ENSNBRG00000012493 zgc:158403 (ENSNBRG00000012460) nfixb (ENSNBRG00000012439) ENSNBRG00000012399 Nile tilapia MODERN SPECIES 16 ENSONIG00000006420 ENSONIG00000006419 ENSONIG00000006424 ENSONIG00000031163 ENSONIG00000032145 ENSONIG00000030637 ENSONIG00000039706 ENSONIG00000035670 ENSONIG00000039339 ENSONIG00000040133 nags (ENSONIG00000006432) ENSONIG00000006433 DLX3 (ENSONIG00000041536) PSMD11 (ENSONIG00000006439) #21 rpain (ENSONIG00000006442) CDK5R1 (ENSONIG00000006445) #22 nsfa (ENSONIG00000006446) ENSONIG00000029578 thraa (ENSONIG00000006456) DUSP3 (ENSONIG00000038734) ENSONIG00000031940 prl (ENSONIG00000006467) ENSONIG00000006476 ENSONIG00000006479 ENSONIG00000038602 ENSONIG00000030610 ENSONIG00000028131 ENSONIG00000039129 pih1d1 (ENSONIG00000006500) tnnt1 (ENSONIG00000006501) syt5a (ENSONIG00000006513) Midas cichlid MODERN SPECIES 563 ENSACIG00000003999 ENSACIG00000003955 ENSACIG00000003920 ENSACIG00000003909 ENSACIG00000003895 nags (ENSACIG00000003826) ENSACIG00000003811 DLX3 (ENSACIG00000003789) PSMD11 (ENSACIG00000003753) #21 rpain (ENSACIG00000003733) cdk5r1a (ENSACIG00000003725) #22 heyl (ENSACIG00000003688) zbtb8b (ENSACIG00000003626) ENSACIG00000003610 ENSACIG00000003605 FUCA1 (ENSACIG00000003591) dlgap3 (ENSACIG00000003520) gja4 (ENSACIG00000003399) smim12 (ENSACIG00000003391) pef1 (ENSACIG00000003379) gjb9b (ENSACIG00000003352) ENSACIG00000003332 ENSACIG00000003306 ENSACIG00000003164 angpt2b (ENSACIG00000003126) col9a2 (ENSACIG00000003057) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Percomorphaceae_D ANCESTRAL SPECIES 1 ENSGT00940000159997 ENSGT00940000165576.a.b ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Anabantaria ANCESTRAL SPECIES 6 ENSGT01030000234785 ENSGT00950000183145.B.a.b.c ENSGT00940000165576.a.b ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Anabantoidei ANCESTRAL SPECIES 25 ENSGT01030000234785 ENSGT00950000183145.B.a.b.c ENSGT00940000165576.a.b ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a.v.a ENSGT00950000182841.a.u ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Climbing perch MODERN SPECIES 21 ENSATEG00000011472 ENSATEG00000011486 ENSATEG00000011514 cyb561 (ENSATEG00000011593) ENSATEG00000011624 ENSATEG00000011659 ENSATEG00000011672 ENSATEG00000011696 ENSATEG00000029173 ENSATEG00000011778 ENSATEG00000011890 ENSATEG00000011897 ENSATEG00000011914 ENSATEG00000011929 #21 ENSATEG00000011989 ENSATEG00000011996 #22 ENSATEG00000012004 ENSATEG00000012062 ENSATEG00000025272 prl (ENSATEG00000012113) ENSATEG00000012149 ENSATEG00000012219 pih1d1 (ENSATEG00000012265) tnnt1 (ENSATEG00000012281) syt5a (ENSATEG00000012334) ENSATEG00000012625 ENSATEG00000015447 ENSATEG00000015469 ENSATEG00000015531 ENSATEG00000015589 ENSATEG00000015630 Siamese fighting fish MODERN SPECIES 19 pyya (ENSBSLG00000008698) mpp2a (ENSBSLG00000008277) cyb561 (ENSBSLG00000008238) ENSBSLG00000008228 HDAC5 (ENSBSLG00000017679) ENSBSLG00000017656 pex12 (ENSBSLG00000017649) ENSBSLG00000012242 ENSBSLG00000011881 nags (ENSBSLG00000011679) ENSBSLG00000011076 dlx4a (ENSBSLG00000011067) DLX3 (ENSBSLG00000010984) PSMD11 (ENSBSLG00000010706) #21 rpain (ENSBSLG00000010417) CDK5R1 (ENSBSLG00000010409) #22 nsfa (ENSBSLG00000009092) ENSBSLG00000008926 ENSBSLG00000008900 ENSBSLG00000008818 thraa (ENSBSLG00000007938) DUSP3 (ENSBSLG00000007501) prl (ENSBSLG00000007481) ENSBSLG00000007085 ENSBSLG00000006772 pih1d1 (ENSBSLG00000006541) tnnt1 (ENSBSLG00000006475) ENSBSLG00000006454 syt5a (ENSBSLG00000006364) ENSBSLG00000006081 ENSBSLG00000006074 Zig-zag eel MODERN SPECIES 22 JMJD6 (ENSMAMG00000017683) ENSMAMG00000025844 ENSMAMG00000024527 ENSMAMG00000017633 ENSMAMG00000025220 ENSMAMG00000024437 ENSMAMG00000017598 ENSMAMG00000017590 ENSMAMG00000028217 ENSMAMG00000017579 ENSMAMG00000017557 ENSMAMG00000017550 ENSMAMG00000017542 ENSMAMG00000017532 ENSMAMG00000017496 #21 ENSMAMG00000017466 #22 ENSMAMG00000017422 ENSMAMG00000024678 ENSMAMG00000017402 ENSMAMG00000017365 prl (ENSMAMG00000017357) ENSMAMG00000017315 ENSMAMG00000017238 pih1d1 (ENSMAMG00000017192) tnnt1 (ENSMAMG00000017171) syt5a (ENSMAMG00000017152) ENSMAMG00000017104 ENSMAMG00000017076 ENSMAMG00000017008 ENSMAMG00000016988 ENSMAMG00000027373 Carangaria ANCESTRAL SPECIES 4 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.b.a.b ENSGT00980000198722 ENSGT00940000164625.o.a ENSGT00940000156584.e.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Carangaria_A ANCESTRAL SPECIES 12 ENSGT00950000183145.B.a.b.c ENSGT00940000159997 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000156584.e.b ENSGT00970000198135 ENSGT00940000177154 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Seriola ANCESTRAL SPECIES 23 ENSGT00940000159997 ENSGT00950000183145.B.a.b.c ENSGT01030000234785 ENSGT00940000168246 ENSGT00940000160643.i ENSGT00940000155348.B.c ENSGT00940000163871.b ENSGT00940000164286.j.b.a.a.a ENSGT00390000003628.a.b ENSGT00940000166711 ENSGT00390000004690.a.a ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00980000198607 ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 Yellowtail amberjack MODERN SPECIES 2955 ENSSLDG00000013393 ENSSLDG00000013406 pyya (ENSSLDG00000013426) mpp2a (ENSSLDG00000013449) ENSSLDG00000013486 ENSSLDG00000013513 smarce1 (ENSSLDG00000013531) ENSSLDG00000013555 rpl23 (ENSSLDG00000013573) ENSSLDG00000013635 ENSSLDG00000013653 ENSSLDG00000013663 DLX3 (ENSSLDG00000013683) PSMD11 (ENSSLDG00000013717) #21 rpain (ENSSLDG00000013756) cdk5r1a (ENSSLDG00000013777) #22 nsfa (ENSSLDG00000013833) thraa (ENSSLDG00000013953) dusp3b (ENSSLDG00000013974) prl (ENSSLDG00000014273) si:dkey-16p21.8 (ENSSLDG00000015459) ENSSLDG00000015474 ENSSLDG00000015534 pih1d1 (ENSSLDG00000015582) tnnt1 (ENSSLDG00000015604) syt5a (ENSSLDG00000015628) fthl31 (ENSSLDG00000015658) aldh16a1 (ENSSLDG00000015707) ENSSLDG00000015812 ENSSLDG00000015877 ENSSLDG00000015890 Greater amberjack MODERN SPECIES 50 ENSSDUG00000006537 ENSSDUG00000006550 ENSSDUG00000006557 pyya (ENSSDUG00000006560) mpp2a (ENSSDUG00000006569) ENSSDUG00000006592 ENSSDUG00000006614 smarce1 (ENSSDUG00000006627) ENSSDUG00000006658 rpl23 (ENSSDUG00000006698) ENSSDUG00000006740 ENSSDUG00000006757 DLX3 (ENSSDUG00000006765) PSMD11 (ENSSDUG00000006787) #21 rpain (ENSSDUG00000006821) cdk5r1a (ENSSDUG00000006827) #22 nsfa (ENSSDUG00000006845) thraa (ENSSDUG00000006951) dusp3b (ENSSDUG00000006978) prl (ENSSDUG00000006996) si:dkey-16p21.8 (ENSSDUG00000007015) ENSSDUG00000007024 ENSSDUG00000007071 pih1d1 (ENSSDUG00000007123) tnnt1 (ENSSDUG00000007148) syt5a (ENSSDUG00000007236) fthl31 (ENSSDUG00000007323) aldh16a1 (ENSSDUG00000007340) ENSSDUG00000007362 ENSSDUG00000007417 ENSSDUG00000007430 Barramundi perch MODERN SPECIES 435 nags (ENSLCAG00010017859) ENSLCAG00010017861 DLX3 (ENSLCAG00010017862) PSMD11 (ENSLCAG00010017874) #21 rpain (ENSLCAG00010017903) cdk5r1a (ENSLCAG00010017907) #22 nsfa (ENSLCAG00010017941) thraa (ENSLCAG00010018125) dusp3b (ENSLCAG00010018132) prl (ENSLCAG00010018133) ENSLCAG00010018168 ENSLCAG00010018294 Pleuronectoidei ANCESTRAL SPECIES 2 ENSGT00940000159997 ENSGT00940000165576.a.b ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000173491 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000163612 ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Tongue sole MODERN SPECIES 8 ENSCSEG00000016208 gcdhb (ENSCSEG00000016185) SLC44A2 (ENSCSEG00000016167) ENSCSEG00000016116 ENSCSEG00000016098 nfil3-6 (ENSCSEG00000016090) ENSCSEG00000015935 plppr2a (ENSCSEG00000015906) ENSCSEG00000015903 tlcd4b (ENSCSEG00000015899) CNN1 (ENSCSEG00000015890) elof1 (ENSCSEG00000015882) tmem205 (ENSCSEG00000015876) rab3db (ENSCSEG00000015864) epor (ENSCSEG00000015758) CDK5R1 (ENSCSEG00000015734) #22 nsfa (ENSCSEG00000015720) thraa (ENSCSEG00000015710) ENSCSEG00000015704 prl (ENSCSEG00000015691) ENSCSEG00000015655 CPT1C (ENSCSEG00000015628) pih1d1 (ENSCSEG00000015518) tnnt1 (ENSCSEG00000015502) ENSCSEG00000015487 DDX39A (ENSCSEG00000015474) ENSCSEG00000015409 ENSCSEG00000015397 txn2 (ENSCSEG00000015391) ENSCSEG00000015385 MYH9 (ENSCSEG00000015246) Turbot MODERN SPECIES 10 rarab (ENSSMAG00000017131) ENSSMAG00000017154 ENSSMAG00000034880 cyb561 (ENSSMAG00000017285) ENSSMAG00000017319 ENSSMAG00000017392 ENSSMAG00000017402 ENSSMAG00000017412 ENSSMAG00000017480 ENSSMAG00000025161 ENSSMAG00000017590 ENSSMAG00000017604 ENSSMAG00000036838 ENSSMAG00000017634 #21 ENSSMAG00000017671 ENSSMAG00000031015 #22 ENSSMAG00000017696 ENSSMAG00000017730 ENSSMAG00000037864 prl (ENSSMAG00000017763) ENSSMAG00000017780 ENSSMAG00000001103 ENSSMAG00000017839 pih1d1 (ENSSMAG00000017873) tnnt1 (ENSSMAG00000017882) syt5a (ENSSMAG00000017896) ENSSMAG00000027834 aldh16a1 (ENSSMAG00000017940) ENSSMAG00000018008 ENSSMAG00000018027 ENSSMAG00000024171 Eupercaria ANCESTRAL SPECIES 3 ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Tetraodontidae ANCESTRAL SPECIES 192 ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d Fugu DUPLICATION Fugu MODERN SPECIES 17 pdk2b (ENSTRUG00000008711) kcnc3a (ENSTRUG00000008518) ENSTRUG00000008416 ENSTRUG00000032403 aoc2 (ENSTRUG00000008235) ENSTRUG00000007901 ENSTRUG00000026727 nags (ENSTRUG00000007852) DLX3 (ENSTRUG00000032474) rpain (ENSTRUG00000032064) ENSTRUG00000026264 #22 dlx4a (ENSTRUG00000025226) DLX3 (ENSTRUG00000024182) PSMD11 (ENSTRUG00000007262) #21 rpain (ENSTRUG00000007150) cdk5r1a (ENSTRUG00000007028) #22 nsfa (ENSTRUG00000006590) thraa (ENSTRUG00000005981) ENSTRUG00000005865 prl (ENSTRUG00000005607) ENSTRUG00000032437 ENSTRUG00000027169 ENSTRUG00000030079 ENSTRUG00000028002 col1a1a (ENSTRUG00000013913) zgc:158403 (ENSTRUG00000013806) GADD45GIP1 (ENSTRUG00000013786) nfixb (ENSTRUG00000022784) rad23aa (ENSTRUG00000013485) gng13b (ENSTRUG00000020004) traf7 (ENSTRUG00000013372) Fugu MODERN SPECIES 17 TMEM184B (ENSTRUG00000009770) TMEM184B (ENSTRUG00000027470) ENSTRUG00000009294 GGA1 (ENSTRUG00000009076) ENSTRUG00000020232 pdk2b (ENSTRUG00000008711) kcnc3a (ENSTRUG00000008518) ENSTRUG00000008416 ENSTRUG00000032403 aoc2 (ENSTRUG00000008235) ENSTRUG00000007901 ENSTRUG00000026727 nags (ENSTRUG00000007852) DLX3 (ENSTRUG00000032474) rpain (ENSTRUG00000032064) ENSTRUG00000026264 #22 dlx4a (ENSTRUG00000025226) DLX3 (ENSTRUG00000024182) PSMD11 (ENSTRUG00000007262) #21 rpain (ENSTRUG00000007150) cdk5r1a (ENSTRUG00000007028) #22 nsfa (ENSTRUG00000006590) thraa (ENSTRUG00000005981) ENSTRUG00000005865 prl (ENSTRUG00000005607) ENSTRUG00000032437 ENSTRUG00000027169 ENSTRUG00000030079 ENSTRUG00000028002 col1a1a (ENSTRUG00000013913) zgc:158403 (ENSTRUG00000013806) Tetraodon MODERN SPECIES 26 rpl23 (ENSTNIG00000014011) CA10 (ENSTNIG00000014012) PPP1R9B (ENSTNIG00000014013) prpsap2 (ENSTNIG00000014014) CASKIN1 (ENSTNIG00000014015) traf7 (ENSTNIG00000014016) nfixb (ENSTNIG00000011170) zgc:158403 (ENSTNIG00000011169) col1a1a (ENSTNIG00000011168) nags (ENSTNIG00000011167) dlx4a (ENSTNIG00000011166) DLX3 (ENSTNIG00000011165) PSMD11 (ENSTNIG00000011164) #21 rpain (ENSTNIG00000011163) THRA (ENSTNIG00000011162) CDK5R1 (ENSTNIG00000011161) #22 DUSP3 (ENSTNIG00000011160) prl (ENSTNIG00000011159) nsfa (ENSTNIG00000011158) RARA (ENSTNIG00000011157) ENSTNIG00000011156 pyya (ENSTNIG00000011155) mpp2a (ENSTNIG00000011154) carhsp1 (ENSTNIG00000011153) ENSTNIG00000011152 nat15 (ENSTNIG00000011151) dnase1 (ENSTNIG00000001098) dnase1 (ENSTNIG00000001457) eci1 (ENSTNIG00000011150) dnase1 (ENSTNIG00000011149) eci1 (ENSTNIG00000011148) Eupecaria_A ANCESTRAL SPECIES 5 ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Ballan wrasse MODERN SPECIES 422 CDK5R1 (ENSLBEG00000008870) #22 ENSLBEG00000008849 nsfa (ENSLBEG00000008700) thraa (ENSLBEG00000008623) ENSLBEG00000008604 prl (ENSLBEG00000008575) ENSLBEG00000008501 ENSLBEG00000008399 pih1d1 (ENSLBEG00000008370) tnnt1 (ENSLBEG00000008309) syt5a (ENSLBEG00000008195) fthl31 (ENSLBEG00000008160) aldh16a1 (ENSLBEG00000008043) ENSLBEG00000008002 ENSLBEG00000007893 ENSLBEG00000007284 Eupecaria_B ANCESTRAL SPECIES ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Perciformes ANCESTRAL SPECIES 1 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000177154 ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Cottioidei ANCESTRAL SPECIES 1 ENSGT00940000165438.a.a ENSGT00940000164623.B ENSGT00940000164108.a.a ENSGT00940000177748 ENSGT00940000169385 ENSGT00940000158145.b ENSGT01010000222313.A.b.a.c ENSGT00940000159680 ENSGT00390000000053.b ENSGT00390000016298.a ENSGT00940000157552.s.b ENSGT00940000160315 ENSGT00940000167287 ENSGT00940000160257 ENSGT00940000164506.b.b ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000157917.b ENSGT00940000155510 ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00940000160152 ENSGT00940000161195.a.a ENSGT00950000183144.B ENSGT00940000157700.d ENSGT00530000063000.a.a.b.i Lumpfish MODERN SPECIES 23 ENSCLMG00005021248 ENSCLMG00005021249 ENSCLMG00005021250 nfil3-6 (ENSCLMG00005021251) ENSCLMG00005021252 plppr2a (ENSCLMG00005021253) tlcd4b (ENSCLMG00005021254) CNN1 (ENSCLMG00005021255) ELOF1 (ENSCLMG00005021258) tmem205 (ENSCLMG00005021265) rab3db (ENSCLMG00005021266) epor (ENSCLMG00005021267) ENSCLMG00005021268 ZNF653 (ENSCLMG00005021269) tspan35 (ENSCLMG00005021271) CDK5R1 (ENSCLMG00005004238) #22 NSF (ENSCLMG00005004256) thraa (ENSCLMG00005004517) ENSCLMG00005004765 prl (ENSCLMG00005004773) ENSCLMG00005004778 ENSCLMG00005004872 pih1d1 (ENSCLMG00005010731) tnnt1 (ENSCLMG00005010732) syt5a (ENSCLMG00005010737) hook2 (ENSCLMG00005010761) junbb (ENSCLMG00005014979) rtbdn (ENSCLMG00005014980) MAST1 (ENSCLMG00005014982) ATG4D (ENSCLMG00005015166) smarca4a (ENSCLMG00005015175) Stickleback MODERN SPECIES 10 gcdhb (ENSGACG00000006288) SLC44A2 (ENSGACG00000006342) ENSGACG00000006395 ENSGACG00000006400 ENSGACG00000006401 ENSGACG00000006406 plppr2a (ENSGACG00000006409) CNN1 (ENSGACG00000006412) elof1 (ENSGACG00000006444) tmem205 (ENSGACG00000006448) rab3db (ENSGACG00000006453) epor (ENSGACG00000006477) swsap1 (ENSGACG00000006482) ZNF653 (ENSGACG00000006483) tspan35 (ENSGACG00000006494) CDK5R1 (ENSGACG00000006504) #22 nsfa (ENSGACG00000006514) thraa (ENSGACG00000006540) ENSGACG00000006554 dusp3b (ENSGACG00000006555) prl (ENSGACG00000006561) ENSGACG00000006598 ENSGACG00000006606 pih1d1 (ENSGACG00000006615) tnnt1 (ENSGACG00000006626) syt5a (ENSGACG00000006630) hook2 (ENSGACG00000006640) junbb (ENSGACG00000006654) rtbdn (ENSGACG00000006658) MAST1 (ENSGACG00000006669) ENSGACG00000006688 Perciformes_a ANCESTRAL SPECIES 1 ENSGT00940000157593 ENSGT00940000156447.a.b ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.b.a.b ENSGT00940000156584.e.b ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Pike perch MODERN SPECIES 186 rbfox1 (ENSSLUG00000011578) JUP (ENSSLUG00000011733) CDK5R1 (ENSSLUG00000015146) #22 nsfa (ENSSLUG00000015251) thraa (ENSSLUG00000017093) dusp3b (ENSSLUG00000017833) prl (ENSSLUG00000017842) ENSSLUG00000017855 ENSSLUG00000017966 ppm1f (ENSSLUG00000019793) Channel bull blenny MODERN SPECIES 22 SLC18A2 (ENSCGOG00000021297) TANC2 (ENSCGOG00000020542) ENSCGOG00000020485 cyb561 (ENSCGOG00000020481) HDAC5 (ENSCGOG00000020048) pex12 (ENSCGOG00000020030) ENSCGOG00000020028 col1a1a (ENSCGOG00000017849) coa3b (ENSCGOG00000017788) ENSCGOG00000017783 nags (ENSCGOG00000017779) ENSCGOG00000017778 DLX3 (ENSCGOG00000017774) PSMD11 (ENSCGOG00000017742) #21 rpain (ENSCGOG00000017739) cdk5r1a (ENSCGOG00000017738) #22 nsfa (ENSCGOG00000016413) thraa (ENSCGOG00000016253) ENSCGOG00000016244 prl (ENSCGOG00000016226) ENSCGOG00000015959 ENSCGOG00000010881 pih1d1 (ENSCGOG00000010772) tnnt1 (ENSCGOG00000010716) syt5a (ENSCGOG00000010695) fthl31 (ENSCGOG00000010489) aldh16a1 (ENSCGOG00000010469) ENSCGOG00000009150 ENSCGOG00000009114 ENSCGOG00000008978 eci1 (ENSCGOG00000008964) Eupecaria_C ANCESTRAL SPECIES 17 ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000174883 ENSGT00940000177241.e ENSGT00940000156584.e.b ENSGT00940000163460.a.a.b ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b Eupercaria_incertae_sedis ANCESTRAL SPECIES 26 ENSGT00950000183197.a ENSGT00940000160534 ENSGT00390000016209 ENSGT00940000155311.A.a ENSGT00940000164625.o.a ENSGT00940000174883 ENSGT00940000156584.e.b ENSGT00940000163460.a.a.b ENSGT00940000173491 ENSGT00390000006679.b ENSGT00390000005602 ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000063301.a.a.c.b #21 ENSGT00390000006416 ENSGT00390000008812.b.b.b #22 ENSGT00530000064085.d ENSGT00940000162682.B.b ENSGT00950000182818.A ENSGT00940000164511.C ENSGT01060000248595.b.a.b.b.a.a ENSGT00510000048192 ENSGT00940000160609.f ENSGT00940000166981 ENSGT00950000182841.a ENSGT00940000161135 ENSGT00940000157744.c ENSGT00650000094974.a ENSGT01100000263484.C.b.b ENSGT00390000005678 ENSGT00950000182846.b European seabass MODERN SPECIES 21 atp5mc1 (ENSDLAG00005033252) ube2z (ENSDLAG00005024583) ENSDLAG00005024569 ENSDLAG00005024552 ENSDLAG00005033674 ENSDLAG00005024545 ENSDLAG00005015851 ENSDLAG00005033637 ENSDLAG00005030687 ENSDLAG00005033367 ENSDLAG00005033811 ENSDLAG00005032733 ENSDLAG00005017346 ENSDLAG00005032181 #21 ENSDLAG00005017138 ENSDLAG00005031697 #22 nsfa (ENSDLAG00005016019) ENSDLAG00005016002 ENSDLAG00005032908 ENSDLAG00005015185 dusp3b (ENSDLAG00005015143) prl (ENSDLAG00005021555) ENSDLAG00005021039 ENSDLAG00005020330 pih1d1 (ENSDLAG00005034590) tnnt1 (ENSDLAG00005018111) syt5a (ENSDLAG00005020187) fthl31 (ENSDLAG00005026383) aldh16a1 (ENSDLAG00005020092) ENSDLAG00005019052 ENSDLAG00005019012 Large yellow croaker MODERN SPECIES 483 pex12 (ENSLCRG00005002581) ENSLCRG00005019218 ENSLCRG00005019217 ENSLCRG00005019215 ENSLCRG00005019214 ENSLCRG00005019213 col1a1a (ENSLCRG00005017192) coa3b (ENSLCRG00005017181) ENSLCRG00005017178 ENSLCRG00005017177 nags (ENSLCRG00005017176) ENSLCRG00005017175 DLX3 (ENSLCRG00005017174) PSMD11 (ENSLCRG00005017156) #21 rpain (ENSLCRG00005017152) cdk5r1a (ENSLCRG00005017151) #22 nsfa (ENSLCRG00005015738) thraa (ENSLCRG00005015522) dusp3b (ENSLCRG00005015510) carhsp1 (ENSLCRG00005015508) nat15 (ENSLCRG00005015506) dnase1 (ENSLCRG00005015504) dnase1 (ENSLCRG00005015503) eci1 (ENSLCRG00005015495) ENSLCRG00005015492 ENSLCRG00005015490 ENSLCRG00005014300 aldh16a1 (ENSLCRG00005014294) fthl27 (ENSLCRG00005014290) syt5a (ENSLCRG00005014287) ENSLCRG00005014286 Gilthead seabream MODERN SPECIES 15 slc18a2 (ENSSAUG00010012977) TANC2 (ENSSAUG00010013053) cyb561 (ENSSAUG00010017773) HDAC5 (ENSSAUG00010017838) pex12 (ENSSAUG00010018968) ENSSAUG00010018971 col1a1a (ENSSAUG00010019190) coa3b (ENSSAUG00010026043) ENSSAUG00010026045 ENSSAUG00010026046 nags (ENSSAUG00010026047) ENSSAUG00010026048 DLX3 (ENSSAUG00010026049) PSMD11 (ENSSAUG00010026051) #21 rpain (ENSSAUG00010026054) cdk5r1a (ENSSAUG00010017277) #22 nsfa (ENSSAUG00010017283) thraa (ENSSAUG00010017310) dusp3b (ENSSAUG00010018268) prl (ENSSAUG00010018269) ENSSAUG00010018270 ENSSAUG00010018348 pih1d1 (ENSSAUG00010019855) sTnT1 (ENSSAUG00010019858) syt5a (ENSSAUG00010019859) fthl31 (ENSSAUG00010019861) aldh16a1 (ENSSAUG00010019869) ENSSAUG00010019937 ENSSAUG00010021362 ENSSAUG00010021365 ENSSAUG00010021370 Cod MODERN SPECIES 11 ENSGMOG00000035364 ENSGMOG00000030390 ENSGMOG00000010953 ENSGMOG00000009709 ENSGMOG00000009678 ENSGMOG00000009721 ENSGMOG00000036840 ENSGMOG00000003498 ENSGMOG00000007172 ENSGMOG00000026796 ENSGMOG00000029804 ENSGMOG00000033856 ENSGMOG00000018564 ENSGMOG00000018547 #21 ENSGMOG00000018536 ENSGMOG00000027036 #22 ENSGMOG00000019217 ENSGMOG00000002108 ENSGMOG00000016982 ENSGMOG00000024456 ENSGMOG00000008388 ENSGMOG00000022294 ENSGMOG00000008386 ENSGMOG00000016739 ENSGMOG00000016730 ENSGMOG00000033190 ENSGMOG00000027372 ENSGMOG00000012683 ENSGMOG00000027615 ENSGMOG00000030118 ENSGMOG00000032502 Otomorpha ANCESTRAL SPECIES 358 ENSGT00940000161341.a.b ENSGT00940000166248.b ENSGT00390000016335.g ENSGT00950000183098.a.a ENSGT00950000183207.b ENSGT00950000183150.a.a.a.d ENSGT00940000157744.c ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000166711 ENSGT00390000004690.a.a Clupeiformes ANCESTRAL SPECIES 213 ENSGT00940000154507.t ENSGT00940000161341.a.b ENSGT00940000166248.b ENSGT00390000016335.g ENSGT00950000183098.a.a.a ENSGT00950000183207.b ENSGT00950000183150.a.a.a.d ENSGT00940000157744.c ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000158951.f ENSGT00940000162682.B.b ENSGT00940000157917.a.a ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000004690.a.a ENSGT00940000166711 ENSGT00390000003628.a.b ENSGT00390000004038 ENSGT00530000063991.a ENSGT00940000154811.A ENSGT00940000163871.b ENSGT00940000155348.B.c ENSGT00940000160643.i ENSGT00670000098179.e ENSGT01050000245366 ENSGT00940000165576.a.b Denticle herring MODERN SPECIES 17 ENSDCDG00000027361 ARL4D (ENSDCDG00000027363) ENSDCDG00000027364 NBR1 (ENSDCDG00000027365) PSME3 (ENSDCDG00000027368) aoc2 (ENSDCDG00000027370) G6PC1 (ENSDCDG00000027372) KAT7 (ENSDCDG00000014057) ENSDCDG00000015082 dlx4a (ENSDCDG00000015090) ENSDCDG00000015093 dusp3b (ENSDCDG00000015097) THRA (ENSDCDG00000015154) nsfa (ENSDCDG00000015372) psmd11a (ENSDCDG00000017299) #21 cdk5r1a (ENSDCDG00000018178) #22 ENSDCDG00000018183 CA10 (ENSDCDG00000018204) rpl23 (ENSDCDG00000018328) ENSDCDG00000018333 smarce1 (ENSDCDG00000018337) ccdc103 (ENSDCDG00000018343) FAM187A (ENSDCDG00000018347) abi3a (ENSDCDG00000018353) ENSDCDG00000018360 mpp2a (ENSDCDG00000018379) ENSDCDG00000018462 pyya (ENSDCDG00000018466) hspb9 (ENSDCDG00000018469) ENSDCDG00000018482 ENSDCDG00000018507 Atlantic herring MODERN SPECIES SUN1 (ENSCHAG00000000998) ENSCHAG00000001325 DNAAF5 (ENSCHAG00000001351) prkar1b (ENSCHAG00000001567) pdgfab (ENSCHAG00000001636) ENSCHAG00000001676 trap1 (ENSCHAG00000001692) ENSCHAG00000001810 mgrn1b (ENSCHAG00000001830) ENSCHAG00000002037 aanat2 (ENSCHAG00000002055) aanat2 (ENSCHAG00000002082) rhbdf1a (ENSCHAG00000002117) mpg (ENSCHAG00000002985) ENSCHAG00000003012 cdk5r1a (ENSCHAG00000003041) #22 ENSCHAG00000003067 ENSCHAG00000003094 ENSCHAG00000003115 ENSCHAG00000003219 ENSCHAG00000003341 CA10 (ENSCHAG00000003410) rpl23 (ENSCHAG00000003462) ENSCHAG00000003686 smarce1 (ENSCHAG00000003698) kif2c (ENSCHAG00000003855) ccdc103 (ENSCHAG00000004096) FAM187A (ENSCHAG00000004112) abi3a (ENSCHAG00000004138) ENSCHAG00000004183 mpp2a (ENSCHAG00000004293) Otophysi ANCESTRAL SPECIES 89 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #19 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965 ENSGT01060000249533 ENSGT00940000159384 ENSGT00650000094974.a ENSGT00940000165079.b ENSGT00940000162682.B.b ENSGT00940000157917.a.a ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b #22 ENSGT00940000157746.f ENSGT00940000175118 ENSGT00950000183044.a.a.a.a.b ENSGT00940000163471.a ENSGT00390000004214 ENSGT00940000164514.b ENSGT00940000156895 ENSGT00390000008825.b.b ENSGT00940000161294 ENSGT00390000012918.c ENSGT00940000154883.e.b ENSGT00510000048008 ENSGT00940000156867 ENSGT01100000263687 ENSGT00940000160433 Characiphysae DUPLICATION Characiphysae ANCESTRAL SPECIES 98 ENSGT00940000157917.a.a.e ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b.e #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000155217.p ENSGT01050000244893.c.a.a.a ENSGT00940000159365.a ENSGT00940000159365.b.a.b ENSGT00940000158180 ENSGT00390000002127.a ENSGT00510000048339 ENSGT00390000015360 ENSGT00530000064157.b ENSGT00940000157022 ENSGT00940000158025.a.a.b ENSGT00940000153469.a.b #11 Channel catfish MODERN SPECIES 11 lyar (ENSIPUG00000000389) TMEM128 (ENSIPUG00000000391) OTOP1 (ENSIPUG00000000394) ENSIPUG00000000402 evc (ENSIPUG00000000408) cops6 (ENSIPUG00000000413) ENSIPUG00000000419 mcm7 (ENSIPUG00000000421) stag3 (ENSIPUG00000000431) gpc2 (ENSIPUG00000000445) stk32b (ENSIPUG00000000449) cytl1 (ENSIPUG00000000458) msx1a (ENSIPUG00000000460) stx18 (ENSIPUG00000000463) NSF (ENSIPUG00000000474) cdk5r1a (ENSIPUG00000000540) #22 ENSIPUG00000000549 CA10 (ENSIPUG00000000565) MYADML2 (ENSIPUG00000000586) tsen54 (ENSIPUG00000000590) ENSIPUG00000000601 ENSIPUG00000000612 ENSIPUG00000000627 ENSIPUG00000000633 foxj1-a (ENSIPUG00000000641) ENSIPUG00000000645 MFSD11 (ENSIPUG00000000657) mettl23 (ENSIPUG00000000688) zgc:77748 (ENSIPUG00000000689) HEATR2 (ENSIPUG00000000696) prkar1b (ENSIPUG00000000724) Characiphysae_b ANCESTRAL SPECIES 257 ENSGT00940000157917.a.a.e ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b.e #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000155217.p Characoidei ANCESTRAL SPECIES 367 ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b.e #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000155217.p Red-bellied piranha MODERN SPECIES 481 ENSPNAG00000011179 ENSPNAG00000011165 ENSPNAG00000011084 nsfa (ENSPNAG00000009726) psmd11a (ENSPNAG00000009600) #21 cdk5r1a (ENSPNAG00000009536) #22 ITGA3 (ENSPNAG00000009522) CA10 (ENSPNAG00000009493) smarce1 (ENSPNAG00000009479) ENSPNAG00000009465 Mexicana tetra MODERN SPECIES 97 ENSAMXG00000042173 proza (ENSAMXG00000037378) gprc5ba (ENSAMXG00000040204) iqck (ENSAMXG00000033749) trap1 (ENSAMXG00000019702) ENSAMXG00000038869 ENSAMXG00000039821 ENSAMXG00000037047 nsfa (ENSAMXG00000006315) psmd11a (ENSAMXG00000004856) #21 cdk5r1a (ENSAMXG00000031177) #22 ENSAMXG00000043821 ENSAMXG00000041546 ENSAMXG00000039954 ENSAMXG00000043342 ENSAMXG00000030693 ENSAMXG00000015447 ENSAMXG00000034665 Electric eel MODERN SPECIES 670 ENSEEEG00000002852 THRA (ENSEEEG00000002636) nsfa (ENSEEEG00000002402) psmd11a (ENSEEEG00000002386) #21 cdk5r1a (ENSEEEG00000002382) #22 ENSEEEG00000002381 CA10 (ENSEEEG00000002372) smarce1 (ENSEEEG00000002366) prkcbb (ENSEEEG00000002364) ENSEEEG00000002361 Characiphysae ANCESTRAL SPECIES ENSGT00390000008812.b.b.b.f #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00390000008812.b.b.b.f #22 Characoidei ANCESTRAL SPECIES ENSGT00390000008812.b.b.b.f #22 Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 16 ENSAMXG00000041385 elovl6 (ENSAMXG00000037372) pitx2 (ENSAMXG00000036432) adh5l (ENSAMXG00000043581) tmem144b (ENSAMXG00000035791) GASK1B (ENSAMXG00000015621) gria2b (ENSAMXG00000042385) glrbb (ENSAMXG00000015663) PDGFC (ENSAMXG00000043858) mrpl18 (ENSAMXG00000015697) ENSAMXG00000015718 tomm5 (ENSAMXG00000033871) grhpra (ENSAMXG00000037725) LINGO2 (ENSAMXG00000035249) gar1 (ENSAMXG00000015752) cdk5r1a (ENSAMXG00000042525) #22 adh5 (ENSAMXG00000015767) eif4ea (ENSAMXG00000038623) ENSAMXG00000038256 PCDH10 (ENSAMXG00000015801) RAPGEF2 (ENSAMXG00000013863) ENSAMXG00000013843 ENSAMXG00000013836 ENSAMXG00000030600 fstl5 (ENSAMXG00000037831) qdpra (ENSAMXG00000029100) ldb2a (ENSAMXG00000013104) TAPT1 (ENSAMXG00000038075) ENSAMXG00000040842 NTRK3 (ENSAMXG00000012174) ENSAMXG00000036244 Mexicana tetra MODERN SPECIES 15 TENT4A (ENSAMXG00000017691) srd5a1 (ENSAMXG00000030003) nsun2 (ENSAMXG00000017682) UBE2QL1 (ENSAMXG00000031785) med10 (ENSAMXG00000030808) ENSAMXG00000029613 ENSAMXG00000041123 ENSAMXG00000029253 ENSAMXG00000042979 col9a2 (ENSAMXG00000011671) smap2 (ENSAMXG00000039358) phf14 (ENSAMXG00000011710) ENSAMXG00000037545 nxph1 (ENSAMXG00000030909) thsd7aa (ENSAMXG00000011743) CDK5R1 (ENSAMXG00000030898) #22 ENSAMXG00000034891 pip4p2 (ENSAMXG00000011771) necab1 (ENSAMXG00000011773) tmem64 (ENSAMXG00000033461) tdp2b (ENSAMXG00000011775) bag6l (ENSAMXG00000011783) si:ch211-215a10.4 (ENSAMXG00000011798) abcf1 (ENSAMXG00000034626) mrps18b (ENSAMXG00000034123) ppp1r10 (ENSAMXG00000011836) agr2 (ENSAMXG00000011843) tspan13b (ENSAMXG00000031188) khdrbs1b (ENSAMXG00000011853) KPNA6 (ENSAMXG00000011854) txlna (ENSAMXG00000030690) Mexicana tetra MODERN SPECIES 19 PEMT (ENSAMXG00000040122) LMF1 (ENSAMXG00000044005) prdm9 (ENSAMXG00000033647) emc9 (ENSAMXG00000004902) irf9 (ENSAMXG00000004911) kif22 (ENSAMXG00000004917) cep55l (ENSAMXG00000038582) rbp4 (ENSAMXG00000032567) pde6c (ENSAMXG00000004926) fra10ac1 (ENSAMXG00000004929) lgi1b (ENSAMXG00000004936) SLC35G1 (ENSAMXG00000033646) plce1 (ENSAMXG00000004946) noc3l (ENSAMXG00000004967) TBC1D12 (ENSAMXG00000004972) ENSAMXG00000036689 #22 TNKS2 (ENSAMXG00000004975) ENSAMXG00000041589 ENSAMXG00000004983 itga3b (ENSAMXG00000033569) dlx3b (ENSAMXG00000029370) dlx4b (ENSAMXG00000042142) ENSAMXG00000034848 kat7b (ENSAMXG00000038714) ptges3l (ENSAMXG00000031922) g6pc1a.1 (ENSAMXG00000033979) g6pc1a.2 (ENSAMXG00000018240) aarsd1 (ENSAMXG00000031615) sgms1b (ENSAMXG00000031502) asah2 (ENSAMXG00000018196) A1CF (ENSAMXG00000018180) Mexicana tetra DUPLICATION Mexicana tetra DUPLICATION Mexicana tetra MODERN SPECIES 28 isl1a (ENSAMXG00000032758) fsta (ENSAMXG00000031165) ndufs4 (ENSAMXG00000019660) arl15a (ENSAMXG00000019670) hspb3 (ENSAMXG00000024932) snx18a (ENSAMXG00000019680) ENSAMXG00000019699 si:dkey-193c22.1 (ENSAMXG00000019724) WDFY3 (ENSAMXG00000019775) CDS1 (ENSAMXG00000041656) tmem175 (ENSAMXG00000031606) rasgef1ba (ENSAMXG00000019929) prkg2 (ENSAMXG00000019972) bmp3 (ENSAMXG00000033554) cfap299 (ENSAMXG00000020037) ENSAMXG00000031754 #22 fgf5 (ENSAMXG00000041105) prdm8b (ENSAMXG00000020060) antxr2a (ENSAMXG00000020087) ENSAMXG00000039912 paqr3a (ENSAMXG00000020133) bmp2k (ENSAMXG00000030267) fras1 (ENSAMXG00000020167) mrpl1 (ENSAMXG00000033077) cnot6l (ENSAMXG00000008943) ENSAMXG00000037467 ENSAMXG00000036528 cxcl11.1 (ENSAMXG00000008942) cxcl11.1 (ENSAMXG00000042180) ENSAMXG00000040357 ENSAMXG00000040166 Mexicana tetra MODERN SPECIES CHRNA10 (ENSAMXG00000030028) mrps23 (ENSAMXG00000011868) NOS2 (ENSAMXG00000011861) NOS2 (ENSAMXG00000010210) lyrm9 (ENSAMXG00000005229) nlk2 (ENSAMXG00000005240) ENSAMXG00000043701 ENSAMXG00000005256 ENSAMXG00000025922 ENSAMXG00000031504 WSCD1 (ENSAMXG00000041764) gucy2f (ENSAMXG00000000032) serpinh1b (ENSAMXG00000031437) GDPD5 (ENSAMXG00000000061) hspa13 (ENSAMXG00000042300) cdk5r1a (ENSAMXG00000036647) #22 samsn1a (ENSAMXG00000000068) si:ch211-207n23.2 (ENSAMXG00000038464) NRIP1 (ENSAMXG00000025365) zgc:153372 (ENSAMXG00000000075) tsku (ENSAMXG00000037547) ENSAMXG00000000079 rap1gap2a (ENSAMXG00000000087) ENSAMXG00000043891 xaf1 (ENSAMXG00000000093) lhx1a (ENSAMXG00000038705) ENSAMXG00000043616 ENSAMXG00000038970 cryba1a (ENSAMXG00000017731) dhrs13a.3 (ENSAMXG00000032589) crybb1l3 (ENSAMXG00000017742) Mexicana tetra MODERN SPECIES 4 MGAT3 (ENSAMXG00000017396) TAB1 (ENSAMXG00000017426) SYNGR1 (ENSAMXG00000017443) IFT27 (ENSAMXG00000017483) cacng2b (ENSAMXG00000029460) eif3d (ENSAMXG00000017547) CUTA (ENSAMXG00000041758) ENSAMXG00000025847 cyth4b (ENSAMXG00000042062) fam83fb (ENSAMXG00000032119) grap2b (ENSAMXG00000017612) CACNA1I (ENSAMXG00000019975) ADAP1 (ENSAMXG00000020035) ENSAMXG00000024991 lgals2b (ENSAMXG00000037007) CDK5R1 (ENSAMXG00000034091) #22 MOB4 (ENSAMXG00000029853) ENSAMXG00000044067 ENSAMXG00000020730 ENSAMXG00000020726 ENSAMXG00000019121 CAMKV (ENSAMXG00000035977) ENSAMXG00000029088 sema3fa (ENSAMXG00000001389) ENSAMXG00000001368 inka1b (ENSAMXG00000040235) gnai2b (ENSAMXG00000031460) SLC38A3 (ENSAMXG00000042501) rbm5 (ENSAMXG00000008146) ENSAMXG00000043033 ENSAMXG00000030009 Mexicana tetra MODERN SPECIES 12 si:ch73-234b20.5 (ENSAMXG00000001464) mat2al (ENSAMXG00000001449) ENSAMXG00000038469 tpm2 (ENSAMXG00000010165) tln1 (ENSAMXG00000010531) hmgcs1 (ENSAMXG00000039120) MAP3K1 (ENSAMXG00000010510) ENSAMXG00000030022 ANKRD55 (ENSAMXG00000010411) il6st (ENSAMXG00000040431) ENSAMXG00000010329 ddx4 (ENSAMXG00000010288) slc38a9 (ENSAMXG00000010243) SH2D4A (ENSAMXG00000034670) ENSAMXG00000042855 ENSAMXG00000031392 #22 ENSAMXG00000010171 fut10 (ENSAMXG00000031008) nrg1 (ENSAMXG00000032216) WRN (ENSAMXG00000010066) ENSAMXG00000010014 ppp2cb (ENSAMXG00000036859) ubxn8 (ENSAMXG00000009996) ENSAMXG00000009981 ENSAMXG00000001773 ROBO1 (ENSAMXG00000001638) ENSAMXG00000040869 APBB1 (ENSAMXG00000034207) ENSAMXG00000043593 ENSAMXG00000012743 ZNF703 (ENSAMXG00000039718) Electric eel MODERN SPECIES 2064 cdk5r1a (ENSEEEG00000000687) #22 Cyprinoidei ANCESTRAL SPECIES 1 ENSGT01100000263525.a.b.a.b.b.b ENSGT00940000160377 ENSGT00390000010157.b ENSGT00390000018541 ENSGT00940000159428.e.b ENSGT00730000111057.c #19 ENSGT00940000157598 ENSGT00940000157195.m ENSGT00390000013965.a ENSGT00940000159384 ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b ENSGT00530000064085.d ENSGT00530000063301.a.a.d #21 ENSGT00390000008812.b.b.b #22 ENSGT00940000157746.f ENSGT00940000155223.a.a ENSGT00390000003628.a.b ENSGT00940000155217.p.a ENSGT01050000244893.c.a.a.a ENSGT00940000159365.b.a.b.a ENSGT00940000158180 ENSGT00390000002127.a ENSGT00510000048339 ENSGT00390000015360 ENSGT00530000064157.b ENSGT00940000157022 ENSGT00940000158025.a.a.b ENSGT00940000153469.a.b #11 ENSGT00390000012364.a #10 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 22 ENSGT00940000157195.m.a ENSGT01060000249533.d ENSGT00940000159384.f ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b.a ENSGT00530000064085.d.g ENSGT00530000063301.a.a.d.b #21 ENSGT00390000008812.b.b.b.g.b #22 ENSGT00940000157746.f.a ENSGT00940000155223.a.a.a ENSGT00390000003628.a.b.b ENSGT00940000155217.p.a.b ENSGT01050000244893.c.a.a.a.b ENSGT00940000159365.b.a.b.a ENSGT00390000008812.b.b.b.g.a #22 ENSGT00940000157746.f.b ENSGT00940000155223.a.a.b ENSGT00390000003628.a.b.a ENSGT00940000155217.p.a.a ENSGT01050000244893.c.a.a.a.a.b ENSGT00940000159365.b.a.b.b ENSGT00940000158180.n ENSGT00390000002127.a.a ENSGT00510000048339.a ENSGT00390000015360.e ENSGT00530000064157.b.g ENSGT00940000157022.p ENSGT00940000158025.a.a.b.f ENSGT00940000153469.a.b.s.b #11 Cyprininae_a ANCESTRAL SPECIES 266 ENSGT00940000160377.j ENSGT00390000010157.b.b ENSGT00390000018541.a ENSGT00940000159428.e.b.a ENSGT00730000111057.c.b #19 ENSGT00940000157598.i ENSGT00940000157195.m.b ENSGT00390000013965.a.a ENSGT00940000159384.e ENSGT00940000166194.e.a ENSGT01060000249533.c ENSGT00940000165079.b.e ENSGT00940000157917.a.b.b ENSGT00530000064085.d.h ENSGT00530000063301.a.a.d.a #21 ENSGT00390000008812.b.b.b.g.a #22 ENSGT00940000157746.f.b ENSGT00940000155223.a.a.b ENSGT00390000003628.a.b.a ENSGT00940000155217.p.a.a ENSGT01050000244893.c.a.a.a.a.b ENSGT00940000159365.b.a.b.b ENSGT00940000158180.m ENSGT00390000002127.a.b ENSGT00510000048339.b ENSGT00390000015360.f ENSGT00530000064157.b.h ENSGT00940000157022.o ENSGT00940000158025.a.a.b.e ENSGT00940000153469.a.b.t #11 ENSGT00390000012364.a.b #10 Common carp reference MODERN SPECIES 1 yipf2 (ENSCCRG00000029459) timm29 (ENSCCRG00000029454) slc25a23b (ENSCCRG00000046495) znf207a (ENSCCRG00000029078) #19 ENSCCRG00000037021 ENSCCRG00000064115 septin9a (ENSCCRG00000045753) nmrk1 (ENSCCRG00000031301) zgc:163143 (ENSCCRG00000031303) ENSCCRG00000055002 ENSCCRG00000015407 ENSCCRG00000015409 thraa (ENSCCRG00000040077) nsfa (ENSCCRG00000045219) psmd11a (ENSCCRG00000046026) #21 cdk5r1a (ENSCCRG00000074527) #22 ENSCCRG00000022691 ENSCCRG00000052752 smarce1 (ENSCCRG00000052746) prkcbb (ENSCCRG00000016641) ENSCCRG00000066688 ENSCCRG00000016632 rbbp6 (ENSCCRG00000027226) TNRC6A (ENSCCRG00000051876) ndufab1b (ENSCCRG00000075422) rpusd1 (ENSCCRG00000074781) dctn5 (ENSCCRG00000069775) gng13b (ENSCCRG00000077704) traf7 (ENSCCRG00000051835) ENSCCRG00000051831 crlf3 (ENSCCRG00000029036) #11 Goldfish MODERN SPECIES 1400 si:ch211-165d12.4 (ENSCARG00000050492) nmrk1 (ENSCARG00000050503) zgc:163143 (ENSCARG00000050533) ENSCARG00000050546 thraa (ENSCARG00000050584) nsfa (ENSCARG00000050783) psmd11a (ENSCARG00000052623) #21 cdk5r1a (ENSCARG00000052919) #22 ENSCARG00000052940 CA10 (ENSCARG00000052992) Cyprininae ANCESTRAL SPECIES 22 ENSGT01100000263525.a.b.a.b.b.b.a ENSGT00940000160377.i ENSGT00390000010157.b.a ENSGT00390000018541.b ENSGT00940000159428.e.b.b ENSGT00730000111057.c.a #19 ENSGT00940000157598.j ENSGT00940000157195.m.a ENSGT01060000249533.d ENSGT00940000159384.f ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b.a ENSGT00530000064085.d.g ENSGT00530000063301.a.a.d.b #21 ENSGT00390000008812.b.b.b.g.b #22 ENSGT00940000157746.f.a ENSGT00940000155223.a.a.a ENSGT00390000003628.a.b.b ENSGT00940000155217.p.a.b ENSGT01050000244893.c.a.a.a.b ENSGT00940000159365.b.a.b.a ENSGT00390000008812.b.b.b.g.a #22 ENSGT00940000157746.f.b ENSGT00940000155223.a.a.b ENSGT00390000003628.a.b.a ENSGT00940000155217.p.a.a ENSGT01050000244893.c.a.a.a.a.b ENSGT00940000159365.b.a.b.b ENSGT00940000158180.n ENSGT00390000002127.a.a Cyprininae_a ANCESTRAL SPECIES 137 ENSGT01100000263525.a.b.a.b.b.b.a ENSGT00940000160377.i ENSGT00390000010157.b.a ENSGT00390000018541.b ENSGT00940000159428.e.b.b ENSGT00730000111057.c.a #19 ENSGT00940000157598.j ENSGT00940000157195.m.a ENSGT01060000249533.d ENSGT00940000159384.f ENSGT00940000165079.b.f ENSGT00940000162682.B.b ENSGT00940000157917.a.b.a ENSGT00530000064085.d.g ENSGT00530000063301.a.a.d.b #21 ENSGT00390000008812.b.b.b.g.b #22 ENSGT00940000157746.f.a ENSGT00940000155223.a.a.a ENSGT00390000003628.a.b.b ENSGT00940000155217.p.a.b ENSGT01050000244893.c.a.a.a.b ENSGT00940000159365.b.a.b.a ENSGT00940000158180.n ENSGT00390000002127.a.a ENSGT00510000048339.a ENSGT00390000015360.e ENSGT00530000064157.b.g ENSGT00940000157022.p ENSGT00940000158025.a.a.b.f ENSGT00940000153469.a.b.s.b #11 ENSGT00940000153469.a.b.s.a.a #11 Common carp reference MODERN SPECIES 3 si:dkey-204f11.64 (ENSCCRG00000066916) clpp (ENSCCRG00000077072) carm1 (ENSCCRG00000029475) yipf2 (ENSCCRG00000052734) timm29 (ENSCCRG00000052735) slc25a23b (ENSCCRG00000074490) ENSCCRG00000057995 znf207a (ENSCCRG00000055654) #19 septin9a (ENSCCRG00000046560) ENSCCRG00000068187 nmrk1 (ENSCCRG00000054757) dlx4a (ENSCCRG00000020191) dusp3b (ENSCCRG00000020194) thraa (ENSCCRG00000046962) nsfa (ENSCCRG00000045657) cdk5r1a (ENSCCRG00000063015) #22 psmd11a (ENSCCRG00000011048) #21 ENSCCRG00000052737 ENSCCRG00000052739 smarce1 (ENSCCRG00000080951) prkcbb (ENSCCRG00000076757) ENSCCRG00000071979 rbbp6 (ENSCCRG00000066900) TNRC6A (ENSCCRG00000000489) ndufab1b (ENSCCRG00000075159) rpusd1 (ENSCCRG00000062828) dctn5 (ENSCCRG00000000406) gng13b (ENSCCRG00000056562) traf7 (ENSCCRG00000000252) ENSCCRG00000000175 crlf3 (ENSCCRG00000074771) #11 Goldfish MODERN SPECIES 22 carm1 (ENSCARG00000008834) yipf2 (ENSCARG00000008755) timm29 (ENSCARG00000008750) slc25a23b (ENSCARG00000008744) znf207a (ENSCARG00000008736) #19 TNRC6C (ENSCARG00000008530) septin9a (ENSCARG00000008267) si:ch211-165d12.4 (ENSCARG00000008213) nmrk1 (ENSCARG00000008207) ENSCARG00000008197 dlx4a (ENSCARG00000008193) dusp3b (ENSCARG00000008187) thraa (ENSCARG00000007129) nsfa (ENSCARG00000006182) psmd11a (ENSCARG00000006016) #21 cdk5r1a (ENSCARG00000005995) #22 ENSCARG00000005951 CA10 (ENSCARG00000005907) smarce1 (ENSCARG00000005867) prkcbb (ENSCARG00000005071) CACNG3 (ENSCARG00000004995) ENSCARG00000004990 rbbp6 (ENSCARG00000004940) TNRC6A (ENSCARG00000004542) ndufab1b (ENSCARG00000004471) rpusd1 (ENSCARG00000004457) dctn5 (ENSCARG00000004445) gng13b (ENSCARG00000004438) traf7 (ENSCARG00000003336) CASKIN1 (ENSCARG00000002904) ENSCARG00000002813 Cyprininae ANCESTRAL SPECIES 831 ENSGT00940000159384.e ENSGT00940000166194.e.a ENSGT01060000249533.c ENSGT00940000165079.b.e ENSGT00940000157917.a.b.b ENSGT00530000064085.d.h ENSGT00530000063301.a.a.d.a #21 ENSGT00390000008812.b.b.b.h #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000008812.b.b.b.h #22 Golden-line barbel MODERN SPECIES 301 yipf2 (ENSSGRG00000032563) timm29 (ENSSGRG00000032609) slc25a23b (ENSSGRG00000032624) znf207a (ENSSGRG00000032715) #19 TNRC6C (ENSSGRG00000032716) septin9a (ENSSGRG00000032718) si:ch211-165d12.4 (ENSSGRG00000032755) nmrk1 (ENSSGRG00000032756) zgc:163143 (ENSSGRG00000032757) ENSSGRG00000032758 ENSSGRG00000032759 dusp3b (ENSSGRG00000032760) thraa (ENSSGRG00000032762) nsfa (ENSSGRG00000032903) psmd11a (ENSSGRG00000032990) #21 cdk5r1a (ENSSGRG00000033350) #22 ENSSGRG00000033352 CA10 (ENSSGRG00000033357) smarce1 (ENSSGRG00000033363) prkcbb (ENSSGRG00000033433) ENSSGRG00000033669 rbbp6 (ENSSGRG00000033671) TNRC6A (ENSSGRG00000033672) ndufab1b (ENSSGRG00000033706) rpusd1 (ENSSGRG00000033707) gng13b (ENSSGRG00000033709) traf7 (ENSSGRG00000033720) CASKIN1 (ENSSGRG00000034256) crlf3 (ENSSGRG00000034257) #11 suz12a (ENSSGRG00000034261) #10 rab11fip4a (ENSSGRG00000034381) #7 Zebrafish MODERN SPECIES 18 timm29 (ENSDARG00000037909) slc25a23b (ENSDARG00000024708) znf207a (ENSDARG00000015538) #19 TNRC6C (ENSDARG00000076847) septin9a (ENSDARG00000020235) si:ch211-165d12.4 (ENSDARG00000079353) nmrk1 (ENSDARG00000037913) zgc:163143 (ENSDARG00000076437) tac4 (ENSDARG00000096234) znfl1 (ENSDARG00000037914) dlx4a (ENSDARG00000011956) dusp3b (ENSDARG00000060130) thraa (ENSDARG00000000151) nsfa (ENSDARG00000007654) psmd11a (ENSDARG00000060150) #21 cdk5r1a (ENSDARG00000037916) #22 ENSDARG00000037917 CA10 (ENSDARG00000009568) smarce1 (ENSDARG00000016871) prkcbb (ENSDARG00000022254) CACNG3 (ENSDARG00000076401) rbbp6 (ENSDARG00000037919) TNRC6A (ENSDARG00000079688) ndufab1b (ENSDARG00000014915) rpusd1 (ENSDARG00000060192) dctn5 (ENSDARG00000003573) gng13b (ENSDARG00000037921) traf7 (ENSDARG00000060207) CASKIN1 (ENSDARG00000046107) crlf3 (ENSDARG00000070261) #11 suz12a (ENSDARG00000070256) #10 Osteoglossiformes ANCESTRAL SPECIES ENSGT00390000008812.b.b.b #22 Asian bonytongue MODERN SPECIES 23 col1a1a (ENSSFOG00015020268) PPP1R9B (ENSSFOG00015020237) psmd3 (ENSSFOG00015020181) mpp2a (ENSSFOG00015005697) FAM187A (ENSSFOG00015020122) ccdc103 (ENSSFOG00015020113) ENSSFOG00015020100 dusp3b (ENSSFOG00015020088) ENSSFOG00015020076 kpnb1 (ENSSFOG00015020000) rpl23 (ENSSFOG00015019980) ENSSFOG00015031465 THRA (ENSSFOG00015005613) nsfa (ENSSFOG00015005423) psmd11a (ENSSFOG00015005378) #21 cdk5r1a (ENSSFOG00015005367) #22 RAPGEFL1 (ENSSFOG00015005308) nr1d1 (ENSSFOG00015005263) ENSSFOG00015005236 igf2bp1 (ENSSFOG00015005197) atp5mc1 (ENSSFOG00015005177) ENSSFOG00015005153 hoxb13a (ENSSFOG00015005110) hoxb9a (ENSSFOG00015005102) hoxb8a (ENSSFOG00015005069) hoxb6a (ENSSFOG00015005084) hoxb5a (ENSSFOG00015005053) ENSSFOG00015004928 hoxb2a (ENSSFOG00015030727) cbx1a (ENSSFOG00015029174) copz2 (ENSSFOG00015004826) Spotted gar MODERN SPECIES 653 ENSLOCG00000013074 nags (ENSLOCG00000013066) TMEM101 (ENSLOCG00000013062) ENSLOCG00000013059 gngt2a (ENSLOCG00000013057) ENSLOCG00000013049 col1a1b (ENSLOCG00000013046) ENSLOCG00000013033 ENSLOCG00000013020 thraa (ENSLOCG00000013012) ENSLOCG00000013003 ormdl3 (ENSLOCG00000012999) wnt3 (ENSLOCG00000012996) nsfa (ENSLOCG00000012959) psmd11b (ENSLOCG00000012951) #21 cdk5r1b (ENSLOCG00000017971) #22 MYO1D (ENSLOCG00000012936) #23 rarab (ENSLOCG00000012917) GJD3 (ENSLOCG00000017520) top2a (ENSLOCG00000012897) ENSLOCG00000017519 psmd3 (ENSLOCG00000012886) ENSLOCG00000012877 med24 (ENSLOCG00000012864) ARHGAP23 (ENSLOCG00000012839) lasp1 (ENSLOCG00000012831) plxdc1 (ENSLOCG00000012819) ENSLOCG00000012815 cacnb1 (ENSLOCG00000012811) rpl19 (ENSLOCG00000012805) ENSLOCG00000012800 Reedfish MODERN SPECIES 5 hexim1 (ENSECRG00000012325) rnf113a (ENSECRG00000012292) strada (ENSECRG00000012248) ddx42 (ENSECRG00000012207) pth3r (ENSECRG00000012156) limd2 (ENSECRG00000012117) MAP3K3 (ENSECRG00000012085) TACO1 (ENSECRG00000012062) gfap (ENSECRG00000012011) KCNH6 (ENSECRG00000011902) dcaf7 (ENSECRG00000011863) ccdc47 (ENSECRG00000011839) nsfa (ENSECRG00000011775) wnt3 (ENSECRG00000011731) PSMD11 (ENSECRG00000011715) #21 cdk5r1b (ENSECRG00000011700) #22 MYO1D (ENSECRG00000011660) #23 ENSECRG00000011614 ENSECRG00000011562 ARF3 (ENSECRG00000011530) wnt9b (ENSECRG00000011451) gosr2 (ENSECRG00000011417) gpatch8 (ENSECRG00000011400) MAP3K14 (ENSECRG00000011365) ENSECRG00000011330 ENSECRG00000011285 ENSECRG00000020216 ENSECRG00000020178 rpl27 (ENSECRG00000020158) RUNDC1 (ENSECRG00000020139) ptges3l (ENSECRG00000020102) Elephant shark MODERN SPECIES 1670 ENSCMIG00000009582 TANC2 (ENSCMIG00000009350) ENSCMIG00000009288 ENSCMIG00000009286 ENSCMIG00000009285 tlk2 (ENSCMIG00000009257) mettl2a (ENSCMIG00000009242) itgb3b (ENSCMIG00000009240) rprml (ENSCMIG00000009237) gosr2 (ENSCMIG00000009234) wnt9b (ENSCMIG00000009220) wnt3 (ENSCMIG00000009213) nsfa (ENSCMIG00000009191) arf2b (ENSCMIG00000009181) psmd11b (ENSCMIG00000009001) #21 cdk5r1b (ENSCMIG00000008960) #22 MYO1D (ENSCMIG00000008906) #23 ENSCMIG00000008875 ENSCMIG00000008873 FMNL1 (ENSCMIG00000008778) ENSCMIG00000008741 ENSCMIG00000008737 ENSCMIG00000008734 ENSCMIG00000008731 tmem98 (ENSCMIG00000008727) #24 ENSCMIG00000008725 ENSCMIG00000008723 ENSCMIG00000008719 ENSCMIG00000008716 ENSCMIG00000008708 ENSCMIG00000008707 Gnathostomata ANCESTRAL SPECIES 1639 ENSGT00390000008812.b.a ##22 ENSGT00940000168666 Euteleostomi ANCESTRAL SPECIES 1286 ENSGT00390000008812.b.a ##22 ENSGT00940000168666 Sarcopterygii ANCESTRAL SPECIES 219 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000011619 ENSGT00940000158454 ENSGT00940000165573 ENSGT00940000160086 ENSGT00940000166800 ENSGT00940000158533 ENSGT00940000157026 Coelacanth MODERN SPECIES 1933 ENSLACG00000009827 si:dkeyp-92c9.2 (ENSLACG00000009045) ##22 myo1g (ENSLACG00000001084) Tetrapoda ANCESTRAL SPECIES 142 ENSGT00940000158279 ENSGT00940000159742 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000011619 ENSGT00940000158454 ENSGT00940000165573 ENSGT00940000160086 ENSGT00940000166800 ENSGT00940000158533 ENSGT00940000157026 Anura ANCESTRAL SPECIES 192 ENSGT00940000158279 ENSGT00940000159742 ENSGT00390000011734 ENSGT01030000234856 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00390000000938 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000003964.b ENSGT00940000166800 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 Frog MODERN SPECIES 6 myd88 (ENSXETG00000018434) gal3st4.3 (ENSXETG00000014499) slc22a13 (ENSXETG00000014497) ENSXETG00000044782 ENSXETG00000032104 smarcc1 (ENSXETG00000014492) ENSXETG00000047526 ENSXETG00000044203 ENSXETG00000047431 cspg5 (ENSXETG00000039472) ndufb10 (ENSXETG00000020351) bcas2 (ENSXETG00000044049) elp6 (ENSXETG00000013936) scap (ENSXETG00000020354) ptpn23 (ENSXETG00000020359) ENSXETG00000049029 ##22 ENSXETG00000044043 ENSXETG00000044586 ENSXETG00000039440 ENSXETG00000044735 znf852 (ENSXETG00000037850) znf250 (ENSXETG00000045242) ENSXETG00000022581 znf665l (ENSXETG00000045685) tsnare1l (ENSXETG00000002869) ENSXETG00000023928 ENSXETG00000047448 XB22065601 [provisional] (ENSXETG00000041425) trim27 (ENSXETG00000042301) ENSXETG00000023930 ENSXETG00000043563 Leishan spiny toad MODERN SPECIES 97 ENSLLEG00000023811 ##22 Amniota ANCESTRAL SPECIES 71 ENSGT00940000160737 ENSGT00940000159742 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00950000183207.a ENSGT00940000159846 ENSGT00940000161389 ENSGT00390000014839.a ENSGT00940000159126 ENSGT00940000162081 ENSGT00940000160805 ENSGT00940000158259 ENSGT01030000234607.A.a.a.b ENSGT00390000014069.a ENSGT00940000159586 Sauria ANCESTRAL SPECIES 53 ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00950000183207.a ENSGT00940000159846 ENSGT00940000161389 ENSGT00390000014839.a ENSGT00940000159126 ENSGT00940000162081 ENSGT00940000160805 ENSGT00940000158259 ENSGT01030000234607.A.a.a.b ENSGT00390000014069.a ENSGT00940000159586 Lepidosauria ANCESTRAL SPECIES 133 ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a Episquamata ANCESTRAL SPECIES 36 ENSGT00940000155153.A.a ENSGT00940000162651 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT01030000234856 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a Laterata ANCESTRAL SPECIES 70 ENSGT00940000164953 ENSGT00940000162364.b ENSGT00940000162942.g.a.b.a ENSGT00940000162942.g.b ENSGT00940000162364.a.b ENSGT00940000155153.B ENSGT00940000162942.h.a.b ENSGT00940000162651 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a Argentine black and white tegu MODERN SPECIES 5 ENSSMRG00000017279 ENSSMRG00000017278 ENSSMRG00000017277 ENSSMRG00000017251 ENSSMRG00000017250 ENSSMRG00000017249 ENSSMRG00000017248 ENSSMRG00000017246 ENSSMRG00000017245 DHX30 (ENSSMRG00000017243) SMARCC1 (ENSSMRG00000017236) CSPG5 (ENSSMRG00000017226) ELP6 (ENSSMRG00000017223) SCAP (ENSSMRG00000017220) PTPN23 (ENSSMRG00000017218) ENSSMRG00000017216 ##22 ENSSMRG00000017213 ENSSMRG00000017198 CCM2 (ENSSMRG00000017195) ENSSMRG00000017194 TBRG4 (ENSSMRG00000017193) ENSSMRG00000017190 GHITM (ENSSMRG00000017189) KCNA5 (ENSSMRG00000017181) SNRNP48 (ENSSMRG00000017177) ENSSMRG00000017140 BCDIN3D (ENSSMRG00000017138) ADIPOR1 (ENSSMRG00000017136) NDUFA4 (ENSSMRG00000017133) SDHAF4 (ENSSMRG00000017131) ENSSMRG00000017128 Common wall lizard MODERN SPECIES 3 ENSPMRG00000014341 ENSPMRG00000014350 ENSPMRG00000014357 ENSPMRG00000014362 ZNF777 (ENSPMRG00000014366) ENSPMRG00000014377 ENSPMRG00000014383 ENSPMRG00000014393 ENSPMRG00000014397 ENSPMRG00000014407 SMARCC1 (ENSPMRG00000014423) ENSPMRG00000015271 CSPG5 (ENSPMRG00000015280) SCAP (ENSPMRG00000015376) PTPN23 (ENSPMRG00000015818) ENSPMRG00000015920 ##22 MYO1G (ENSPMRG00000015935) ENSPMRG00000015987 ENSPMRG00000015989 TBRG4 (ENSPMRG00000015994) TRDMT1 (ENSPMRG00000016003) ZNF653 (ENSPMRG00000016013) ENSPMRG00000016018 ENSPMRG00000016023 CCDC13 (ENSPMRG00000016037) C5orf15 (ENSPMRG00000016073) SRI (ENSPMRG00000016078) ENSPMRG00000016086 ENSPMRG00000016089 ENSPMRG00000016095 ENSPMRG00000016104 Toxicofera ANCESTRAL SPECIES 64 ENSGT00940000162942.g.a.b.a ENSGT00940000162942.g.b ENSGT00940000155153.B.b ENSGT00940000155153.A.a ENSGT00940000162364.b ENSGT00940000155153.B.a ENSGT00940000161747.p ENSGT00940000162651 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT01030000234856 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501.ab Elapidae ANCESTRAL SPECIES 67 ENSGT00940000154420.B.e.b.a ENSGT00940000161747.o.a.a.a ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT01030000234856 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a Indian cobra MODERN SPECIES 337 GALNT4 (ENSNNAG00000008216) ENSNNAG00000008191 EHD3 (ENSNNAG00000008108) NDUFA4 (ENSNNAG00000008090) ENSNNAG00000008084 SMARCC1 (ENSNNAG00000008002) DHX30 (ENSNNAG00000007665) ENSNNAG00000007618 ENSNNAG00000007606 ENSNNAG00000018827 ENSNNAG00000018822 ENSNNAG00000018810 ENSNNAG00000018805 ELP6 (ENSNNAG00000018801) ENSNNAG00000018798 ENSNNAG00000018791 ##22 ENSNNAG00000018787 ENSNNAG00000018784 CCDC12 (ENSNNAG00000018781) ENSNNAG00000018778 KLHL18 (ENSNNAG00000018775) Elapidae_a ANCESTRAL SPECIES 149 ENSGT00940000154420.B.e.b.a ENSGT00940000161747.o.a.a.a ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT01030000234856 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a Acanthophiinae ANCESTRAL SPECIES 116 ENSGT00940000154420.B.e.b.a ENSGT00940000161747.o.a.a.a ENSGT00940000155153.C.a.b ENSGT00940000155153.B.b ENSGT00940000155153.A.a ENSGT00940000161747.p ENSGT00940000162651 ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000171891 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a Mainland tiger snake MODERN SPECIES 239 ENSNSUG00000011784 ENSNSUG00000011785 ENSNSUG00000011786 ENSNSUG00000011787 ENSNSUG00000011788 ENSNSUG00000011790 ENSNSUG00000011794 DHX30 (ENSNSUG00000011796) SMARCC1 (ENSNSUG00000011808) CSPG5 (ENSNSUG00000012605) ELP6 (ENSNSUG00000012607) SCAP (ENSNSUG00000012608) ENSNSUG00000012610 ENSNSUG00000012611 ENSNSUG00000012614 ENSNSUG00000012615 ##22 MYO1G (ENSNSUG00000012616) CCM2 (ENSNSUG00000012619) Eastern brown snake MODERN SPECIES 1049 ENSPTXG00000017036 ENSPTXG00000017038 ##22 Blue-lipped sea krait MODERN SPECIES 440 ENSLLTG00000001737 ##22 MYO1G (ENSLLTG00000001747) CCM2 (ENSLLTG00000001777) Lizard MODERN SPECIES 1897 ENSACAG00000025684 ##22 tuatara MODERN SPECIES 1912 ENSSPUG00000019123 CDC25A (ENSSPUG00000019125) ENSSPUG00000019127 ENSSPUG00000019136 DHX30 (ENSSPUG00000019160) ENSSPUG00000019165 SMARCC1 (ENSSPUG00000019170) CSPG5 (ENSSPUG00000019173) ELP6 (ENSSPUG00000019175) SCAP (ENSSPUG00000019176) ENSSPUG00000019177 ENSSPUG00000019179 ENSSPUG00000019181 ENSSPUG00000019187 ENSSPUG00000019189 ENSSPUG00000019191 ##22 ENSSPUG00000019193 ENSSPUG00000019196 Archelosauria ANCESTRAL SPECIES 6 ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410 ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000166800 ENSGT00940000160086 ENSGT00940000165573 ENSGT00390000018786 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 Archosauria ANCESTRAL SPECIES ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00960000190383 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410 ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000166800 ENSGT00940000160086 ENSGT00940000165573 ENSGT00390000018786 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 Australian saltwater crocodile MODERN SPECIES ENSCPRG00005001727 ENSCPRG00005001728 ENSCPRG00005001729 ENSCPRG00005001730 ENSCPRG00005001735 ENSCPRG00005001743 CDC25A (ENSCPRG00005001747) ENSCPRG00005001814 DHX30 (ENSCPRG00005001822) SMARCC1 (ENSCPRG00005001885) ELP6 (ENSCPRG00005001896) SCAP (ENSCPRG00005001897) ENSCPRG00005001903 PTPN23 (ENSCPRG00005001909) ENSCPRG00005001916 ENSCPRG00005001921 ##22 MYO1G (ENSCPRG00005001924) MINDY4 (ENSCPRG00005001985) AQP1 (ENSCPRG00005002003) GHRHR (ENSCPRG00005002020) ADCYAP1R1 (ENSCPRG00005002121) ENSCPRG00005002132 ENSCPRG00005002174 VIPR1 (ENSCPRG00005002258) SEC22C (ENSCPRG00005002376) NKTR (ENSCPRG00005002399) ZBTB47 (ENSCPRG00005002404) KLHL40 (ENSCPRG00005002406) HHATL (ENSCPRG00005002410) CCDC13 (ENSCPRG00005002423) HIGD1A (ENSCPRG00005002426) Cryptodira ANCESTRAL SPECIES 4 ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410.kb.a.a ENSGT01100000264012 ENSGT00390000000410.lb ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 Chinese turtle MODERN SPECIES 1397 ENSPSIG00000000054 ENSPSIG00000007912 CDC25A (ENSPSIG00000008005) ENSPSIG00000011193 DHX30 (ENSPSIG00000011740) SMARCC1 (ENSPSIG00000011793) ENSPSIG00000011838 ELP6 (ENSPSIG00000011988) SCAP (ENSPSIG00000012075) ENSPSIG00000000056 ##22 Testudinoidea ANCESTRAL SPECIES 8 ENSGT01100000263519.E.b.b.a.a.a.a.b.a ENSGT01080000257839.b ENSGT01030000235175.b.a.b ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410.kb.a.a ENSGT01100000264012 ENSGT00390000000410.lb ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 Emydidae ANCESTRAL SPECIES 35 ENSGT01100000263519.E.b.b.a.a.a.a.b.a ENSGT01080000257839.b ENSGT01030000235175.b.a.b ENSGT01100000263520.a.a.a.a.b.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT01030000234856 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410.kb.a.a ENSGT00390000000410.lb ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 ENSGT01030000234570.d.b.a.b.b.b painted turtle MODERN SPECIES 837 ENSCPBG00000015197 ENSCPBG00000015201 ENSCPBG00000015203 ENSCPBG00000015207 CDC25A (ENSCPBG00000015210) ENSCPBG00000015215 ENSCPBG00000015219 DHX30 (ENSCPBG00000015231) ENSCPBG00000015241 SMARCC1 (ENSCPBG00000015258) CSPG5 (ENSCPBG00000015265) ELP6 (ENSCPBG00000015270) SCAP (ENSCPBG00000015282) ENSCPBG00000015293 PTPN23 (ENSCPBG00000015296) ENSCPBG00000015303 ##22 MYO1G (ENSCPBG00000015309) ENSCPBG00000015321 CCM2 (ENSCPBG00000015334) ENSCPBG00000015341 TBRG4 (ENSCPBG00000015345) ENSCPBG00000015357 ENSCPBG00000015359 ENSCPBG00000015361 ENSCPBG00000015364 ENSCPBG00000015365 KLHL18 (ENSCPBG00000015366) KIF9 (ENSCPBG00000015374) SETD2 (ENSCPBG00000015402) Three-toed box turtle MODERN SPECIES 48 ENSTMTG00000019536 ENSTMTG00000019554 ENSTMTG00000019560 ENSTMTG00000019571 ENSTMTG00000019582 ENSTMTG00000019588 ENSTMTG00000019597 CDC25A (ENSTMTG00000019609) ENSTMTG00000019656 DHX30 (ENSTMTG00000019720) ENSTMTG00000019752 SMARCC1 (ENSTMTG00000019774) ELP6 (ENSTMTG00000019829) SCAP (ENSTMTG00000019851) PTPN23 (ENSTMTG00000019891) ENSTMTG00000019917 ##22 MYO1G (ENSTMTG00000019936) ENSTMTG00000020150 CCM2 (ENSTMTG00000020166) ENSTMTG00000020175 TBRG4 (ENSTMTG00000020183) ENSTMTG00000007242 ENSTMTG00000007252 ENSTMTG00000007259 KLHL18 (ENSTMTG00000007268) SETD2 (ENSTMTG00000007286) ENSTMTG00000007371 NBEAL2 (ENSTMTG00000007411) CCDC12 (ENSTMTG00000007593) PTH1R (ENSTMTG00000007606) MYL3 (ENSTMTG00000007625) Testudinidae ANCESTRAL SPECIES 1 ENSGT00940000162942.h.b.b ENSGT00940000155153.A.b ENSGT00960000189325 ENSGT00940000161603 ENSGT01100000263519.A.b.a.b.a.a ENSGT01030000234669.M.b.a.b.b ENSGT00940000160737 ENSGT00940000159742.i.b ENSGT00940000159742.j ENSGT00940000158279 ENSGT00940000156347 ENSGT00440000034270 ENSGT00390000011734 ENSGT00940000158130 ENSGT00940000157687 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00390000016168.a ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000000410.kb.a.a ENSGT01100000264012 ENSGT00950000185398 ENSGT00940000157026 ENSGT00940000158533 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 ENSGT00940000158574 ENSGT01030000234570.d.b.a.b.b.b Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005002628 ENSGEVG00005002638 ENSGEVG00005002645 ENSGEVG00005002654 CDC25A (ENSGEVG00005002669) ENSGEVG00005002699 ENSGEVG00005002721 DHX30 (ENSGEVG00005002857) ENSGEVG00005003056 SMARCC1 (ENSGEVG00005008843) ENSGEVG00005008900 CSPG5 (ENSGEVG00005008931) ELP6 (ENSGEVG00005008986) SCAP (ENSGEVG00005009022) PTPN23 (ENSGEVG00005009165) ENSGEVG00005009327 ##22 MYO1G (ENSGEVG00005009440) CCM2 (ENSGEVG00005009758) ENSGEVG00005009844 TBRG4 (ENSGEVG00005009887) ENSGEVG00005009964 ENSGEVG00005010031 ENSGEVG00005010072 ENSGEVG00005010105 ENSGEVG00005010150 ENSGEVG00005010181 KLHL18 (ENSGEVG00005010243) KIF9 (ENSGEVG00005010334) SETD2 (ENSGEVG00005010484) ENSGEVG00005010646 NBEAL2 (ENSGEVG00005010756) Abingdon island giant tortoise MODERN SPECIES 2106 ENSCABG00000012699 PTPN23 (ENSCABG00000012714) ENSCABG00000012778 ##22 MYO1G (ENSCABG00000012783) ENSCABG00000012793 CCM2 (ENSCABG00000012798) ENSCABG00000012801 TBRG4 (ENSCABG00000012804) ENSCABG00000012813 ENSCABG00000012815 Actinopterygii ANCESTRAL SPECIES 314 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000003964.b ENSGT00940000155041 ENSGT00390000017619 ENSGT00940000166800 ENSGT00940000160086 ENSGT00940000165573 ENSGT00940000158454 ENSGT00390000011619 Reedfish MODERN SPECIES 4 TGM4 (ENSECRG00000012896) tmem42a (ENSECRG00000012882) ENSECRG00000012860 ENSECRG00000012837 zgc:77056 (ENSECRG00000012826) gpd1l (ENSECRG00000012784) OSBPL10 (ENSECRG00000012739) stt3b (ENSECRG00000012705) GADL1 (ENSECRG00000012670) tgfbr2b (ENSECRG00000012647) rbms3 (ENSECRG00000012615) AZI2 (ENSECRG00000012585) CMC1 (ENSECRG00000012567) eomesb (ENSECRG00000012547) SLC4A7 (ENSECRG00000012400) si:dkeyp-92c9.2 (ENSECRG00000012311) ##22 myo1g (ENSECRG00000012271) NMRAL1 (ENSECRG00000012245) Neopterygii ANCESTRAL SPECIES 271 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000161501 ENSGT01030000234607.A.a.b.a ENSGT00390000003964.b ENSGT00390000011619 ENSGT00940000158454 ENSGT00940000165573 ENSGT00940000160086 ENSGT00940000166800 ENSGT00390000010763 ENSGT00940000159342 ENSGT00390000017352 Osteoglossocephalai ANCESTRAL SPECIES 119 ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT01050000246199 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213 ENSGT00530000063698.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT00940000156139 ENSGT00940000166598 ENSGT00390000007371.e ENSGT00940000154868.a.b.a ENSGT00390000016565.h Clupeocephala ANCESTRAL SPECIES 19 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00940000156213.r ENSGT00530000063698.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT00940000156139 ENSGT00940000157260.t ENSGT00940000166598 Otomorpha ANCESTRAL SPECIES 9 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00940000156213.r ENSGT00530000063698.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT00940000156139 ENSGT00940000157260.t ENSGT00940000166598 Clupeiformes ANCESTRAL SPECIES 42 ENSGT00390000015257.d ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b.i ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000063698.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT01000000214440.A.a.b.a.h ENSGT00940000156139 ENSGT00940000166598 ENSGT00390000007371.e Denticle herring MODERN SPECIES 12 fhl3b (ENSDCDG00000035449) meaf6 (ENSDCDG00000035448) stpg1 (ENSDCDG00000035447) map7d1b (ENSDCDG00000035444) thrap3b (ENSDCDG00000035440) eva1bb (ENSDCDG00000035438) LSM10 (ENSDCDG00000035437) oscp1a (ENSDCDG00000035436) zc3h12ab (ENSDCDG00000035435) smim13 (ENSDCDG00000035434) nedd9 (ENSDCDG00000035433) TMEM170B (ENSDCDG00000035431) HIVEP1 (ENSDCDG00000035429) edn1 (ENSDCDG00000035426) illr1 (ENSDCDG00000035425) si:dkeyp-92c9.2 (ENSDCDG00000035424) ##22 myo1g (ENSDCDG00000035308) rxrba (ENSDCDG00000035254) col11a2 (ENSDCDG00000035209) hsd17b8 (ENSDCDG00000035184) brd2a (ENSDCDG00000035175) ago4 (ENSDCDG00000034759) ENSDCDG00000034726 c19h1orf109 (ENSDCDG00000034725) cdca8 (ENSDCDG00000034722) ENSDCDG00000034717 ENSDCDG00000034716 ENSDCDG00000034693 ENSDCDG00000034673 ENSDCDG00000034660 anxa14 (ENSDCDG00000034650) Atlantic herring MODERN SPECIES 10 pithd1 (ENSCHAG00000015692) eloa (ENSCHAG00000015663) ENSCHAG00000015654 rpl11 (ENSCHAG00000015580) eef1a1l1 (ENSCHAG00000015444) ENSCHAG00000015430 ppt1 (ENSCHAG00000015280) cap1 (ENSCHAG00000014608) KIAA0319L (ENSCHAG00000013267) NCDN (ENSCHAG00000013240) tfap2e (ENSCHAG00000013149) psmb2 (ENSCHAG00000013111) ENSCHAG00000013102 CLSPN (ENSCHAG00000012798) ENSCHAG00000012782 si:dkeyp-92c9.2 (ENSCHAG00000012772) ##22 myo1g (ENSCHAG00000012249) nup88 (ENSCHAG00000012022) ENSCHAG00000011971 si:ch211-195b13.1 (ENSCHAG00000010903) ENSCHAG00000010443 ENSCHAG00000010425 ENSCHAG00000010419 xkr8.3 (ENSCHAG00000010304) xkr8.3 (ENSCHAG00000010294) ENSCHAG00000010283 srsf4 (ENSCHAG00000010267) ENSCHAG00000010260 EPB41 (ENSCHAG00000005001) ccn2b (ENSCHAG00000004779) stx12 (ENSCHAG00000004742) Otophysi ANCESTRAL SPECIES 414 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e Characiphysae ANCESTRAL SPECIES 158 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT01100000263475.f.b.g ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000164585.c.a.a.b ENSGT00940000159088.b ENSGT00940000160132 ENSGT00390000014273.b Channel catfish MODERN SPECIES 3 rpa3 (ENSIPUG00000017268) ENSIPUG00000017293 sdhaf3 (ENSIPUG00000017298) ENSIPUG00000017308 tac1 (ENSIPUG00000017395) asns (ENSIPUG00000017428) bloc1s4 (ENSIPUG00000017477) pard6gb (ENSIPUG00000017510) jarid2 (ENSIPUG00000017520) dtnbp1b (ENSIPUG00000017544) ENSIPUG00000017589 ENSIPUG00000017600 ENSIPUG00000017620 ENSIPUG00000017639 ENSIPUG00000017719 si:dkeyp-92c9.2 (ENSIPUG00000017726) ##22 myo1g (ENSIPUG00000017745) ENSIPUG00000017886 ENSIPUG00000017889 si:ch211-195b13.1 (ENSIPUG00000017905) eya3 (ENSIPUG00000017943) ENSIPUG00000017978 ENSIPUG00000018013 ENSIPUG00000018041 ENSIPUG00000018045 xkr8.3 (ENSIPUG00000018046) septin7a (ENSIPUG00000018053) eepd1 (ENSIPUG00000018422) kiaa0895 (ENSIPUG00000018456) chtop (ENSIPUG00000018468) Snapin (ENSIPUG00000018486) Characiphysae_b ANCESTRAL SPECIES 157 ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT01100000263475.f.b.g ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000164585.c.a.a.b ENSGT00940000159088.b ENSGT00940000160132 ENSGT00390000014273.b Electric eel MODERN SPECIES 319 gabpb2a (ENSEEEG00000023880) mllt11 (ENSEEEG00000023881) mindy1 (ENSEEEG00000023882) ENSEEEG00000023883 mrpl24 (ENSEEEG00000023886) prcc (ENSEEEG00000023887) mrpl9 (ENSEEEG00000023888) KLHL10 (ENSEEEG00000023890) ENSEEEG00000023894 ADAM11 (ENSEEEG00000023895) p3h4 (ENSEEEG00000023899) FKBP10 (ENSEEEG00000023908) NT5C3B (ENSEEEG00000023920) KLHL10 (ENSEEEG00000023924) ENSEEEG00000023927 si:dkeyp-92c9.2 (ENSEEEG00000023928) ##22 myo1g (ENSEEEG00000023937) si:ch211-195b13.1 (ENSEEEG00000023947) eya3 (ENSEEEG00000023971) ENSEEEG00000023972 xkr8.3 (ENSEEEG00000023974) ENSEEEG00000023975 KCNMA1 (ENSEEEG00000023977) ENSEEEG00000023985 Characoidei ANCESTRAL SPECIES 79 ENSGT00940000156479.b ENSGT00940000159220.d ENSGT00950000183211.a.b.b ENSGT00390000006790.b ENSGT00390000001994.c ENSGT00390000002457.c ENSGT00390000010029 ENSGT00940000164651.a.a.c ENSGT00940000165423.b ENSGT00940000165163 ENSGT00390000003051 ENSGT00950000183046.b.b ENSGT00940000159332 ENSGT00940000159581.b.b ENSGT01030000234575.c.a.a.a.a.a.a.b.b.a.a.b ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT01100000263475.f.b.g ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000154222.d.b ENSGT00390000009677 ENSGT00390000004417.a ENSGT00390000002869 ENSGT00390000008274 ENSGT00940000164585.c.a.a.b ENSGT00940000159088.b ENSGT00940000160132 ENSGT00390000014273.b Red-bellied piranha MODERN SPECIES 1085 ptp4a3a (ENSPNAG00000009168) ENSPNAG00000009143 ENSPNAG00000001298 ENSPNAG00000001289 si:dkeyp-92c9.2 (ENSPNAG00000009067) ##22 Mexicana tetra MODERN SPECIES 15 ENSAMXG00000042726 umad1 (ENSAMXG00000042230) ENSAMXG00000038644 glcci1a (ENSAMXG00000015807) ENSAMXG00000032606 rims3 (ENSAMXG00000015828) ptp4a3a (ENSAMXG00000038147) ENSAMXG00000013192 ENSAMXG00000015859 ENSAMXG00000030341 ENSAMXG00000031540 ENSAMXG00000001132 ENSAMXG00000037320 ENSAMXG00000037864 ENSAMXG00000033245 ENSAMXG00000042428 ##22 myo1g (ENSAMXG00000017476) ENSAMXG00000017459 ENSAMXG00000031043 ENSAMXG00000042852 si:ch211-195b13.1 (ENSAMXG00000036994) eya3 (ENSAMXG00000017407) ENSAMXG00000017391 ENSAMXG00000017381 xkr8.3 (ENSAMXG00000043627) septin7a (ENSAMXG00000017358) eepd1 (ENSAMXG00000029821) MATCAP2 (ENSAMXG00000017314) chtopa (ENSAMXG00000031344) snapin (ENSAMXG00000041247) smad10a (ENSAMXG00000017275) Cyprinoidei ANCESTRAL SPECIES 15 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000159581.b.b ENSGT01030000234863.a ENSGT00940000159332 ENSGT00950000183046.b.b ENSGT00390000003051 ENSGT00390000008029 ENSGT00940000165423.b ENSGT00940000164651.a.a.c ENSGT00390000010029 ENSGT00390000002457.c Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 416 ENSGT00390000002869.fc.a ENSGT00390000008274.d ENSGT00940000164585.c.a.a.b.b ENSGT00940000159088.b.b ENSGT00940000164158.A.b.b ENSGT00730000111394.b ENSGT00530000063725.o.j.a ENSGT00940000161854.b.a ENSGT00990000205603 ENSGT00940000154870.A.b.a.b ENSGT00400000025005.a.a ENSGT00990000204388.b ENSGT00940000158522.m ENSGT00950000182919.B.a.h ENSGT00940000159283.c.a.b ENSGT00390000008812.b.a.a.a ##22 ENSGT00940000158053.t ENSGT00940000164496.a.a.f.a ENSGT00950000182978.B.b.a.b ENSGT01090000260093.b.f.k.a.a ENSGT01090000260093.b.f.k.a.b.b ENSGT01090000260093.b.f.l.a.b ENSGT01090000260093.b.e ENSGT00940000159581.b.b.e.a ENSGT00940000159581.b.b.e.b ENSGT01030000234863.a ENSGT00940000159332.a Goldfish MODERN SPECIES 10 snapin (ENSCARG00000008536) smad10a (ENSCARG00000008543) syt11a (ENSCARG00000008579) rit1 (ENSCARG00000008584) zgc:64022 (ENSCARG00000008601) thap7 (ENSCARG00000008614) PRF1 (ENSCARG00000008627) s100v2 (ENSCARG00000008661) ENSCARG00000008684 ENSCARG00000008697 ENSCARG00000008712 polr3gla (ENSCARG00000008724) txnipa (ENSCARG00000008735) mtx1b (ENSCARG00000008746) thbs3b (ENSCARG00000008823) ENSCARG00000009130 ##22 myo1g (ENSCARG00000009325) si:ch211-195b13.1 (ENSCARG00000014814) eya3 (ENSCARG00000014884) ENSCARG00000014947 ENSCARG00000014952 ENSCARG00000014958 xkr8.3 (ENSCARG00000014969) ENSCARG00000014979 ENSCARG00000014985 ENSCARG00000015000 ENSCARG00000015023 ENSCARG00000015045 ENSCARG00000015071 ENSCARG00000015083 zgc:114119 (ENSCARG00000015102) Cyprininae_a ANCESTRAL SPECIES 147 ENSGT00390000004417.a.n ENSGT00390000002869.fc.a ENSGT00390000008274.d ENSGT00940000164585.c.a.a.b.b ENSGT00940000159088.b.b ENSGT00940000164158.A.b.b ENSGT00730000111394.b ENSGT00530000063725.o.j.b ENSGT00940000161854.b.a ENSGT00990000205603 ENSGT00940000154870.A.b.a.b ENSGT00400000025005.a.a ENSGT00990000204388.b ENSGT00950000182919.B.a.h ENSGT00940000159283.c.a.b ENSGT00390000008812.b.a.a.a ##22 ENSGT00940000158053.t ENSGT00940000164496.a.a.f.a ENSGT00950000182978.B.a ENSGT01090000260093.b.f.k.a.a ENSGT01090000260093.b.f.k.a.b.b ENSGT01090000260093.b.f.l.a.b ENSGT01090000260093.b.e ENSGT00940000159581.b.b.e.a ENSGT00940000159581.b.b.e.b ENSGT01030000234863.a ENSGT00940000159332.a ENSGT00950000183046.b.b.a ENSGT00390000003051 ENSGT00390000008029 ENSGT00940000163195.A.d Common carp reference MODERN SPECIES 12 rit1 (ENSCCRG00000041160) pex11b (ENSCCRG00000069568) zgc:64022 (ENSCCRG00000055608) thap7 (ENSCCRG00000054201) ENSCCRG00000035660 ENSCCRG00000030196 s100v2 (ENSCCRG00000069163) ENSCCRG00000031127 ENSCCRG00000006002 ENSCCRG00000075692 ENSCCRG00000055851 polr3gla (ENSCCRG00000074506) txnipa (ENSCCRG00000074922) mtx1b (ENSCCRG00000081037) thbs3b (ENSCCRG00000030623) si:dkeyp-92c9.2 (ENSCCRG00000065349) ##22 myo1g (ENSCCRG00000028621) si:ch211-195b13.1 (ENSCCRG00000059502) eya3 (ENSCCRG00000007984) ENSCCRG00000024720 ENSCCRG00000075227 ENSCCRG00000025449 xkr8.3 (ENSCCRG00000062469) ENSCCRG00000069884 ENSCCRG00000067593 ENSCCRG00000001226 ENSCCRG00000011038 ENSCCRG00000008333 ENSCCRG00000058002 ENSCCRG00000053890 ptp4a3a (ENSCCRG00000053762) Cyprininae ANCESTRAL SPECIES 112 ENSGT00390000004417.a.m ENSGT00390000002869.fc.b ENSGT00390000008274.c ENSGT00940000164585.c.a.a.b.a.b ENSGT00940000159088.b.a ENSGT00940000160132 ENSGT00390000014273.b ENSGT00940000164158.A.b.a ENSGT00730000111394.a ENSGT00530000063725.o.k ENSGT00940000161854.b.b ENSGT00940000154870.A.b.a.a ENSGT00400000025005.a.b ENSGT00990000204388.a ENSGT00940000159283.c.a.a ENSGT00390000008812.b.a.a.b ##22 ENSGT00940000158053.s ENSGT01100000263547.a.a.a.c.b.a Goldfish MODERN SPECIES 55 rit1 (ENSCARG00000031864) pex11b (ENSCARG00000031855) zgc:64022 (ENSCARG00000031849) thap7 (ENSCARG00000031845) ENSCARG00000031836 ENSCARG00000031795 s100v2 (ENSCARG00000031772) ENSCARG00000031739 s100v2 (ENSCARG00000031723) s100v2 (ENSCARG00000031713) ENSCARG00000031702 ENSCARG00000031693 polr3gla (ENSCARG00000031668) txnipa (ENSCARG00000031649) thbs3b (ENSCARG00000029783) si:dkeyp-92c9.2 (ENSCARG00000029731) ##22 myo1g (ENSCARG00000026063) ENSCARG00000025865 ENSCARG00000025848 Cyprininae_a ANCESTRAL SPECIES 122 ENSGT00390000002869.fc.b ENSGT00390000008274.c ENSGT00940000164585.c.a.a.b.a.b ENSGT00940000159088.b.a ENSGT00940000160132 ENSGT00390000014273.b ENSGT00940000164158.A.b.a ENSGT00730000111394.a ENSGT00530000063725.o.k ENSGT00990000203866 ENSGT00940000154870.A.b.b ENSGT00400000025005.a.b ENSGT00990000204388.a ENSGT00940000158522.m ENSGT00940000159283.c.a.a ENSGT00390000008812.b.a.a.b ##22 ENSGT00940000158053.s ENSGT01100000263547.a.a.a.c.b.a ENSGT00940000164496.a.a.f.b ENSGT00950000182978.B.b.a.a ENSGT01090000260093.b.f.k.b ENSGT01090000260093.b.f.k.a.b.a ENSGT00940000178710 ENSGT01090000260093.b.f.l.a.a ENSGT00940000159581.b.b.f ENSGT00940000159332.b ENSGT00950000183046.b.b.b Common carp reference MODERN SPECIES 31 rit1 (ENSCCRG00000065435) pex11b (ENSCCRG00000041169) zgc:64022 (ENSCCRG00000061002) thap7 (ENSCCRG00000041179) ENSCCRG00000041180 ENSCCRG00000062107 ENSCCRG00000030188 ENSCCRG00000030192 ENSCCRG00000043162 s100v2 (ENSCCRG00000017171) ENSCCRG00000052760 ENSCCRG00000028793 polr3gla (ENSCCRG00000063361) txnipa (ENSCCRG00000035169) thbs3b (ENSCCRG00000020222) si:dkeyp-92c9.2 (ENSCCRG00000066400) ##22 myo1g (ENSCCRG00000058923) ENSCCRG00000058078 ENSCCRG00000076637 ENSCCRG00000069835 si:ch211-195b13.1 (ENSCCRG00000025282) ENSCCRG00000024721 ENSCCRG00000040439 ENSCCRG00000076438 ENSCCRG00000080637 ENSCCRG00000040422 rims3 (ENSCCRG00000040403) glcci1a (ENSCCRG00000072157) umad1 (ENSCCRG00000061868) rpa3 (ENSCCRG00000080368) col28a1a (ENSCCRG00000039357) Cyprininae ANCESTRAL SPECIES ENSGT00390000008812.b.a.b ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00390000008812.b.a.b ##22 Golden-line barbel MODERN SPECIES 247 s100v2 (ENSSGRG00000013657) ENSSGRG00000013655 polr3gla (ENSSGRG00000013651) ENSSGRG00000013650 mtx1b (ENSSGRG00000013648) thbs3b (ENSSGRG00000010111) si:dkeyp-92c9.2 (ENSSGRG00000010065) ##22 myo1g (ENSSGRG00000009807) eya3 (ENSSGRG00000009805) ENSSGRG00000009787 ENSSGRG00000009786 ENSSGRG00000009785 xkr8.3 (ENSSGRG00000009783) ENSSGRG00000009781 ptp4a3a (ENSSGRG00000009768) ENSSGRG00000009765 rims3 (ENSSGRG00000009761) glcci1a (ENSSGRG00000009759) rpa3 (ENSSGRG00000009757) sdhaf3 (ENSSGRG00000009750) sdhaf3 (ENSSGRG00000009749) tac1 (ENSSGRG00000009748) Zebrafish MODERN SPECIES 10 pex11b (ENSDARG00000069147) zgc:64022 (ENSDARG00000070705) thap7 (ENSDARG00000070704) prf1.2 (ENSDARG00000021444) PRF1 (ENSDARG00000110781) ENSDARG00000115439 ENSDARG00000109428 s100v2 (ENSDARG00000070702) ENSDARG00000062352 si:dkey-81h8.1 (ENSDARG00000094074) thbs3b (ENSDARG00000012060) mtx1b (ENSDARG00000036109) txnipa (ENSDARG00000036107) polr3gla (ENSDARG00000012044) ENSDARG00000098950 si:dkeyp-92c9.2 (ENSDARG00000036105) ##22 myo1g (ENSDARG00000036104) ENSDARG00000057010 si:ch211-195b13.1 (ENSDARG00000016623) eya3 (ENSDARG00000036100) ENSDARG00000078841 ENSDARG00000004498 ENSDARG00000076820 xkr8.3 (ENSDARG00000039996) ptp4a3a (ENSDARG00000039997) ENSDARG00000103700 rims3 (ENSDARG00000062305) glcci1a (ENSDARG00000008503) umad1 (ENSDARG00000076008) rpa3 (ENSDARG00000002613) col28a1a (ENSDARG00000077084) Euteleosteomorpha ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000167907 ENSGT00530000063698.b ENSGT00940000157047.n ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT00940000156139 Acanthomorphata ANCESTRAL SPECIES 70 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00940000172023 ENSGT00940000162287.D ENSGT00950000182929.B.b.a ENSGT00940000175701 ENSGT00950000182929.B.a.b ENSGT00390000003308.a.b ENSGT00940000165835.b Euacanthomorphacea ANCESTRAL SPECIES 24 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00940000175701 ENSGT00950000182929.B.a.b ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00730000111056.h Pinecone sodierfish MODERN SPECIES 2 stpg1 (ENSMMDG00005019205) map7d1b (ENSMMDG00005019203) thrap3b (ENSMMDG00005019200) eva1bb (ENSMMDG00005019196) LSM10 (ENSMMDG00005019195) oscp1a (ENSMMDG00005019191) ENSMMDG00005019189 ENSMMDG00005019186 ENSMMDG00005019184 zc3h12ab (ENSMMDG00005019182) smim13 (ENSMMDG00005019180) nedd9 (ENSMMDG00005019178) TMEM170B (ENSMMDG00005019175) HIVEP1 (ENSMMDG00005019157) edn1 (ENSMMDG00005019150) ENSMMDG00005019149 ##22 myo1g (ENSMMDG00005019146) si:ch211-195b13.1 (ENSMMDG00005017403) eya3 (ENSMMDG00005017198) ENSMMDG00005017186 xkr8.3 (ENSMMDG00005017185) ENSMMDG00005017183 srsf4 (ENSMMDG00005017182) msto1 (ENSMMDG00005017177) ENSMMDG00005017166 apoa4a (ENSMMDG00005017161) apoa4a (ENSMMDG00005017159) tomm40l (ENSMMDG00005017112) ENSMMDG00005017047 ENSMMDG00005016853 lipea (ENSMMDG00005016840) Percomorphaceae ANCESTRAL SPECIES 10 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00940000175701 ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00730000111056.h Tiger tail seahorse MODERN SPECIES 128 TMEM170B (ENSHCOG00000000589) HIVEP1 (ENSHCOG00000012761) edn1 (ENSHCOG00000012731) si:dkeyp-92c9.2 (ENSHCOG00000012700) ##22 myo1g (ENSHCOG00000012690) si:ch211-195b13.1 (ENSHCOG00000012633) eya3 (ENSHCOG00000012603) ENSHCOG00000012570 xkr8.3 (ENSHCOG00000012561) srsf4 (ENSHCOG00000012540) msto1 (ENSHCOG00000012328) ENSHCOG00000012278 apoa4a (ENSHCOG00000012266) tomm40l (ENSHCOG00000012258) ENSHCOG00000012238 lipea (ENSHCOG00000012168) SLC9A3 (ENSHCOG00000012017) ENSHCOG00000011972 olah (ENSHCOG00000011885) Percomorphaceae_B ANCESTRAL SPECIES 15 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Ovalentaria ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Atherinomorphae ANCESTRAL SPECIES 12 ENSGT00950000182894.D ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 Cyprinodontiformes ANCESTRAL SPECIES 10 ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483 ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01030000235133.b ENSGT00940000160519.a.b ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00690000103882 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 Cyprinodontoidei ANCESTRAL SPECIES 31 ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483.a ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01030000235133.b ENSGT00940000160519.a.b ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00690000103882 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 NAME_4 ANCESTRAL SPECIES 83 ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483.a ENSGT00940000177483.b ENSGT00950000182929.B.b.a ENSGT00940000162287.D.k.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a ENSGT00490000043398 Mummichog MODERN SPECIES 263 apoea (ENSFHEG00000014348) ENSFHEG00000014354 nedd9 (ENSFHEG00000014373) TMEM170B (ENSFHEG00000014388) HIVEP1 (ENSFHEG00000014397) edn1 (ENSFHEG00000000349) si:dkeyp-92c9.2 (ENSFHEG00000014475) ##22 myo1g (ENSFHEG00000014591) KDM1B (ENSFHEG00000014644) ENSFHEG00000014658 slc9a1b (ENSFHEG00000014723) ENSFHEG00000014886 ENSFHEG00000000365 gja9b (ENSFHEG00000014937) mycbp (ENSFHEG00000014945) ENSFHEG00000014955 ENSFHEG00000015054 rpl11 (ENSFHEG00000015082) ENSFHEG00000015087 ENSFHEG00000015120 eloa (ENSFHEG00000015141) pithd1 (ENSFHEG00000015166) Sheepshead minnow MODERN SPECIES 2057 si:dkeyp-92c9.2 (ENSCVAG00000020868) ##22 Poeciliinae ANCESTRAL SPECIES 24 ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483.a ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01030000235133.b ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00690000103882 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00940000166197 Poecilia ANCESTRAL SPECIES 38 ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483.a ENSGT00950000182929.B.b.a ENSGT00940000164868.C.d ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00690000103882 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a NAME_6 ANCESTRAL SPECIES 109 ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483.a ENSGT00950000182929.B.b.a ENSGT00940000164868.C.d ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00690000103882 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a Sailfin molly MODERN SPECIES 211 si:dkey-211g8.6 (ENSPLAG00000017393) ago3b (ENSPLAG00000017432) olah (ENSPLAG00000017460) slc9a3.2 (ENSPLAG00000017548) lipea (ENSPLAG00000017573) ENSPLAG00000000403 tomm40l (ENSPLAG00000017633) ENSPLAG00000017649 ENSPLAG00000017658 apoea (ENSPLAG00000017693) ENSPLAG00000017700 nedd9 (ENSPLAG00000017709) TMEM170B (ENSPLAG00000017722) HIVEP1 (ENSPLAG00000017728) edn1 (ENSPLAG00000017755) si:dkeyp-92c9.2 (ENSPLAG00000017766) ##22 Amazon molly MODERN SPECIES 362 ENSPFOG00000020943 si:dkey-211g8.6 (ENSPFOG00000020942) ago3b (ENSPFOG00000006684) olah (ENSPFOG00000006539) slc9a3.2 (ENSPFOG00000006131) lipea (ENSPFOG00000005863) ENSPFOG00000005750 tomm40l (ENSPFOG00000005745) ENSPFOG00000005708 ENSPFOG00000005684 ENSPFOG00000005655 nedd9 (ENSPFOG00000005482) TMEM170B (ENSPFOG00000005459) HIVEP1 (ENSPFOG00000005423) edn1 (ENSPFOG00000005409) si:dkeyp-92c9.2 (ENSPFOG00000020941) ##22 myo1g (ENSPFOG00000004936) KDM1B (ENSPFOG00000004666) ENSPFOG00000023348 slc9a1b (ENSPFOG00000004410) ENSPFOG00000004356 srsf10b (ENSPFOG00000004318) gja9b (ENSPFOG00000020940) mycbp (ENSPFOG00000004312) ENSPFOG00000004073 ENSPFOG00000004052 ENSPFOG00000003924 ENSPFOG00000003782 ENSPFOG00000022594 rpl11 (ENSPFOG00000003710) ENSPFOG00000003601 Guppy MODERN SPECIES 441 si:dkey-211g8.6 (ENSPREG00000009108) ago3b (ENSPREG00000009084) olah (ENSPREG00000009063) slc9a3.2 (ENSPREG00000009025) lipea (ENSPREG00000008976) ENSPREG00000008948 tomm40l (ENSPREG00000008932) ENSPREG00000008921 ENSPREG00000008910 ENSPREG00000008893 ENSPREG00000008886 nedd9 (ENSPREG00000008848) TMEM170B (ENSPREG00000008823) HIVEP1 (ENSPREG00000008754) edn1 (ENSPREG00000008722) si:dkeyp-92c9.2 (ENSPREG00000008704) ##22 myo1g (ENSPREG00000008681) KDM1B (ENSPREG00000008646) ENSPREG00000008615 slc9a1b (ENSPREG00000008555) ENSPREG00000008406 srsf10b (ENSPREG00000008383) gja9b (ENSPREG00000008379) mycbp (ENSPREG00000008373) ENSPREG00000008352 ENSPREG00000008243 ENSPREG00000008217 rpl11 (ENSPREG00000008204) ENSPREG00000008155 eloa (ENSPREG00000008132) pithd1 (ENSPREG00000008105) Platyfish MODERN SPECIES 4 ago3b (ENSXMAG00000027615) olah (ENSXMAG00000027083) slc9a3.2 (ENSXMAG00000007197) lipea (ENSXMAG00000007235) ENSXMAG00000016090 tomm40l (ENSXMAG00000016106) apoa4a (ENSXMAG00000025130) ENSXMAG00000020999 ENSXMAG00000016118 ENSXMAG00000025340 nedd9 (ENSXMAG00000016120) TMEM170B (ENSXMAG00000021733) ENSXMAG00000022925 HIVEP1 (ENSXMAG00000024924) edn1 (ENSXMAG00000016147) si:dkeyp-92c9.2 (ENSXMAG00000019599) ##22 myo1g (ENSXMAG00000016150) KDM1B (ENSXMAG00000016188) ENSXMAG00000016195 slc9a1b (ENSXMAG00000016199) ENSXMAG00000004722 srsf10b (ENSXMAG00000029337) ENSXMAG00000025360 gja9b (ENSXMAG00000016245) mycbp (ENSXMAG00000027091) ENSXMAG00000016257 ENSXMAG00000016289 ENSXMAG00000016322 rpl11 (ENSXMAG00000016325) ENSXMAG00000016340 eloa (ENSXMAG00000016354) Aplocheiloidei ANCESTRAL SPECIES 42 ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00940000177483 ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000157751 ENSGT00390000014274 ENSGT00940000156338.b ENSGT00940000164147.b ENSGT00940000154450.tc ENSGT00940000160519.a.b ENSGT01090000260070.C.b ENSGT00390000017974.ob ENSGT00940000166232 ENSGT00940000164334 ENSGT00950000183029.B.j.d ENSGT00910000144211 ENSGT00940000166197 ENSGT00390000002428.a Mangrove rivulus MODERN SPECIES 302 si:dkeyp-92c9.2 (ENSKMAG00000021394) ##22 myo1g (ENSKMAG00000021405) ENSKMAG00000021419 ENSKMAG00000021423 ENSKMAG00000021435 ENSKMAG00000000151 ENSKMAG00000000228 sfpq (ENSKMAG00000000238) lypla2 (ENSKMAG00000000260) pithd1 (ENSKMAG00000000320) eloa (ENSKMAG00000000365) ENSKMAG00000000373 rpl11 (ENSKMAG00000000381) ENSKMAG00000000413 ENSKMAG00000000476 mycbp (ENSKMAG00000000569) Oryzias ANCESTRAL SPECIES 23 ENSGT00940000160704.a.b ENSGT00950000182894.D ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00950000182929.B.a.b.d ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00940000177439.a ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a Oryzias_b ANCESTRAL SPECIES 27 ENSGT00940000160704.a.b ENSGT00950000182894.D ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00950000182929.B.a.b.d ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00530000064067 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00940000177439.a ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a ENSGT00950000183163.a.a.bb Indian medaka MODERN SPECIES 3 LMNA (ENSOMEG00000021784) usf2 (ENSOMEG00000021824) tekt2 (ENSOMEG00000021938) ago3b (ENSOMEG00000022085) olah (ENSOMEG00000022108) slc9a3.2 (ENSOMEG00000022221) lipea (ENSOMEG00000000584) ENSOMEG00000022326 apoa4a (ENSOMEG00000022338) apoea (ENSOMEG00000022353) ENSOMEG00000022388 nedd9 (ENSOMEG00000022405) TMEM170B (ENSOMEG00000022416) HIVEP1 (ENSOMEG00000022437) edn1 (ENSOMEG00000022459) si:dkeyp-92c9.2 (ENSOMEG00000022471) ##22 myo1g (ENSOMEG00000000591) ENSOMEG00000022516 si:ch211-195b13.1 (ENSOMEG00000022573) eya3 (ENSOMEG00000005472) ENSOMEG00000005502 xkr8.3 (ENSOMEG00000005514) srsf4 (ENSOMEG00000005541) msto1 (ENSOMEG00000005580) smim13 (ENSOMEG00000000693) zc3h12ab (ENSOMEG00000005602) ENSOMEG00000005607 ENSOMEG00000005619 ENSOMEG00000005633 oscp1a (ENSOMEG00000005663) ENSOMEG00000005680 Javanese ricefish MODERN SPECIES 2 naxe (ENSOJAG00000007389) LMNA (ENSOJAG00000006940) usf2 (ENSOJAG00000006840) ENSOJAG00000006649 si:dkey-211g8.6 (ENSOJAG00000006606) ago3b (ENSOJAG00000004733) slc9a3.2 (ENSOJAG00000003301) ENSOJAG00000003222 ENSOJAG00000003059 apoa4a (ENSOJAG00000003038) apoea (ENSOJAG00000003033) nedd9 (ENSOJAG00000003018) TMEM170B (ENSOJAG00000003011) ENSOJAG00000003004 edn1 (ENSOJAG00000002995) si:dkeyp-92c9.2 (ENSOJAG00000002984) ##22 myo1g (ENSOJAG00000002719) si:ch211-195b13.1 (ENSOJAG00000002602) eya3 (ENSOJAG00000001877) ENSOJAG00000001723 xkr8.3 (ENSOJAG00000001703) ENSOJAG00000001693 srsf4 (ENSOJAG00000001676) msto1 (ENSOJAG00000001662) smim13 (ENSOJAG00000001654) zc3h12ab (ENSOJAG00000001643) ENSOJAG00000001634 ENSOJAG00000001622 oscp1a (ENSOJAG00000018623) LSM10 (ENSOJAG00000018606) eva1bb (ENSOJAG00000018573) Oryzias_a ANCESTRAL SPECIES 18 ENSGT00940000160704.a.b ENSGT00950000182894.D ENSGT00990000203527.b ENSGT00990000203527.a.a.a.e.b ENSGT00940000155256.d.b.b ENSGT00390000015518 ENSGT00940000158616 ENSGT00730000111056.h ENSGT00940000165835.b ENSGT00950000182929.B.a.b.d ENSGT00950000182929.B.b.a ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00560000078630 ENSGT00940000155107.a.a.b ENSGT00940000177439.b ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00940000154096.b.b.b.b.a Japanese Medaka HdrR MODERN SPECIES 2 tekt2 (ENSORLG00000009043) ENSORLG00000009048 si:dkey-211g8.6 (ENSORLG00000009062) ago3b (ENSORLG00000009091) olah (ENSORLG00000024308) slc9a3.2 (ENSORLG00000009128) lipea (ENSORLG00000009156) ENSORLG00000009178 apoa4a (ENSORLG00000009193) apoea (ENSORLG00000027981) ENSORLG00000027395 nedd9 (ENSORLG00000009253) TMEM170B (ENSORLG00000009260) HIVEP1 (ENSORLG00000009270) edn1 (ENSORLG00000009276) si:dkeyp-92c9.2 (ENSORLG00000009287) ##22 myo1g (ENSORLG00000009357) si:ch211-195b13.1 (ENSORLG00000009386) eya3 (ENSORLG00000009396) ENSORLG00000009399 xkr8.3 (ENSORLG00000009411) ENSORLG00000028783 ENSORLG00000009430 msto1 (ENSORLG00000009462) smim13 (ENSORLG00000023911) ENSORLG00000009473 ENSORLG00000027497 ENSORLG00000028537 oscp1a (ENSORLG00000009500) ENSORLG00000028326 LSM10 (ENSORLG00000009504) Chinese medaka MODERN SPECIES 659 naxe (ENSOSIG00000012769) LMNA (ENSOSIG00000012777) usf2 (ENSOSIG00000012861) si:dkey-211g8.6 (ENSOSIG00000012892) ENSOSIG00000012894 ago3b (ENSOSIG00000012962) olah (ENSOSIG00000019607) slc9a3.2 (ENSOSIG00000019646) ENSOSIG00000019669 apoa4a (ENSOSIG00000019670) apoea (ENSOSIG00000019672) nedd9 (ENSOSIG00000019673) TMEM170B (ENSOSIG00000019677) HIVEP1 (ENSOSIG00000019686) edn1 (ENSOSIG00000019690) si:dkeyp-92c9.2 (ENSOSIG00000019691) ##22 myo1g (ENSOSIG00000019767) eya3 (ENSOSIG00000021665) ENSOSIG00000021694 ENSOSIG00000021696 ENSOSIG00000021699 msto1 (ENSOSIG00000021707) smim13 (ENSOSIG00000021709) zc3h12ab (ENSOSIG00000021718) ENSOSIG00000021721 ENSOSIG00000021725 ENSOSIG00000021733 oscp1a (ENSOSIG00000021743) LSM10 (ENSOSIG00000021747) eva1bb (ENSOSIG00000021751) thrap3b (ENSOSIG00000021772) Ovalentaria_B ANCESTRAL SPECIES 15 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00730000111056.h Pomacentridae ANCESTRAL SPECIES 95 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00730000111056.h Pomacentridae_A ANCESTRAL SPECIES 199 ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00730000111056.h Amphiprion ANCESTRAL SPECIES 231 ENSGT00390000008812.b.a ##22 ENSGT00940000181624 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00730000111056.h Orange clownfish MODERN SPECIES 8 oscp1a (ENSAPEG00000021818) ENSAPEG00000021810 zc3h12ab (ENSAPEG00000021795) smim13 (ENSAPEG00000021784) nedd9 (ENSAPEG00000021755) TMEM170B (ENSAPEG00000021718) HIVEP1 (ENSAPEG00000021694) edn1 (ENSAPEG00000021668) msto1 (ENSAPEG00000021611) apoea (ENSAPEG00000021599) apoa4a (ENSAPEG00000021487) apoa4a (ENSAPEG00000021446) tomm40l (ENSAPEG00000021410) ENSAPEG00000021368 lipea (ENSAPEG00000021242) si:dkeyp-92c9.2 (ENSAPEG00000021228) ##22 ENSAPEG00000021216 myo1g (ENSAPEG00000021124) si:ch211-195b13.1 (ENSAPEG00000021040) eya3 (ENSAPEG00000020920) XKR8 (ENSAPEG00000020907) xkr8.3 (ENSAPEG00000020878) ENSAPEG00000020870 srsf4 (ENSAPEG00000020826) msto1 (ENSAPEG00000020795) apoea (ENSAPEG00000020773) ENSAPEG00000020754 ENSAPEG00000020718 tomm40l (ENSAPEG00000020695) ENSAPEG00000020642 lipea (ENSAPEG00000020612) Clown anemonefish MODERN SPECIES 3539 ccnk (ENSAOCG00000013582) ENSAOCG00000013565 si:dkeyp-92c9.2 (ENSAOCG00000013553) ##22 ENSAOCG00000013542 myo1g (ENSAOCG00000013525) ENSAOCG00000013462 Spiny chromis MODERN SPECIES 2184 si:dkeyp-92c9.2 (ENSAPOG00000011717) ##22 Bicolor damselfish MODERN SPECIES 653 ENSSPAG00000009744 si:dkeyp-92c9.2 (ENSSPAG00000009759) ##22 myo1g (ENSSPAG00000009764) lipea (ENSSPAG00000009808) ENSSPAG00000010057 ENSSPAG00000013878 tomm40l (ENSSPAG00000013943) apoa4a (ENSSPAG00000013971) apoa4a (ENSSPAG00000014010) ENSSPAG00000014433 msto1 (ENSSPAG00000014487) srsf4 (ENSSPAG00000014538) xkr8.3 (ENSSPAG00000014781) ENSSPAG00000014784 eya3 (ENSSPAG00000014797) si:ch211-195b13.1 (ENSSPAG00000014834) slc9a3.2 (ENSSPAG00000014964) Cichlidae ANCESTRAL SPECIES 7 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f.r ENSGT00940000178710 ENSGT01090000260093.b.f.q ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b Pseudocrenilabrinae ANCESTRAL SPECIES 12 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f.r ENSGT01090000260093.b.f.q.c.b ENSGT01090000260093.b.f.q.c.a ENSGT01090000260093.b.f.q.d ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 9 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000163472.e.b.e.a.b.a ENSGT00940000154393.s.b.b.a.b ENSGT01090000260093.b.f.r ENSGT01090000260093.b.f.q.c.b ENSGT01090000260093.b.f.q.c.a ENSGT01090000260093.b.f.q.d ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c Haplochromini ANCESTRAL SPECIES 5 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000154393.s.b.b.a.b ENSGT01090000260093.b.f.r ENSGT01090000260093.b.f.q.c.b ENSGT01090000260093.b.f.q.c.a ENSGT01090000260093.b.f.q.d ENSGT01090000260093.b.e ENSGT00940000156213.r.g.b ENSGT00940000156213.q.b ENSGT00940000156213.r.g.a ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c Haplochromini_A ANCESTRAL SPECIES 5 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT01100000263769.b ENSGT01070000254348 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000178420 ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000154393.s.b.b.a.b ENSGT01090000260093.b.f.r ENSGT01090000260093.b.f.q.c.b ENSGT01090000260093.b.f.q.c.a ENSGT01090000260093.b.f.q.d ENSGT01090000260093.b.e ENSGT00940000156213.r.g.a ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b Haplochromini_B ANCESTRAL SPECIES 1 ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b.j ENSGT01090000260364.b.b.a ENSGT00390000010118.c.a.b.i.a ENSGT01060000249788.a ENSGT01070000254348.a ENSGT01070000254348.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00940000178420 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT00940000154393.s.b.b.a.b ENSGT01090000260093.b.f.r ENSGT01090000260093.b.f.q.c.b ENSGT01090000260093.b.f.q.c.a ENSGT01090000260093.b.f.q.d ENSGT01090000260093.b.e ENSGT00940000156213.r.g.a ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b Zebra mbuna MODERN SPECIES 140 si:dkeyp-92c9.2 (ENSMZEG00005028100) ##22 myo1g (ENSMZEG00005028099) si:ch211-195b13.1 (ENSMZEG00005028095) eya3 (ENSMZEG00005028094) ENSMZEG00005028093 ENSMZEG00005028092 ENSMZEG00005028090 ENSMZEG00005028089 ENSMZEG00005028088 Eastern happy MODERN SPECIES 13 ENSACLG00000004674 ENSACLG00000004658 ENSACLG00000004641 ENSACLG00000004617 ENSACLG00000004607 ENSACLG00000004542 ENSACLG00000004517 ENSACLG00000004502 zc3h12ab (ENSACLG00000004488) smim13 (ENSACLG00000004481) ENSACLG00000004476 nedd9 (ENSACLG00000004452) TMEM170B (ENSACLG00000004294) HIVEP1 (ENSACLG00000004264) edn1 (ENSACLG00000004243) si:dkeyp-92c9.2 (ENSACLG00000004105) ##22 myo1g (ENSACLG00000004056) si:ch211-195b13.1 (ENSACLG00000004027) eya3 (ENSACLG00000003994) ENSACLG00000003988 ENSACLG00000003980 ENSACLG00000003966 ENSACLG00000003963 ENSACLG00000003699 xkr8.3 (ENSACLG00000003669) srsf4 (ENSACLG00000003395) msto1 (ENSACLG00000003353) apoea (ENSACLG00000003342) apoa4a (ENSACLG00000003335) apoa4a (ENSACLG00000003327) tomm40l (ENSACLG00000003295) P. nyererei MODERN SPECIES 388 thrap3b (ENSPNYG00000003062) eva1bb (ENSPNYG00000003106) LSM10 (ENSPNYG00000003138) oscp1a (ENSPNYG00000003173) ENSPNYG00000003238 ENSPNYG00000003253 ENSPNYG00000003267 ENSPNYG00000003289 zc3h12ab (ENSPNYG00000003297) smim13 (ENSPNYG00000003320) nedd9 (ENSPNYG00000003335) ENSPNYG00000003341 TMEM170B (ENSPNYG00000003350) HIVEP1 (ENSPNYG00000003371) edn1 (ENSPNYG00000003412) si:dkeyp-92c9.2 (ENSPNYG00000003471) ##22 myo1g (ENSPNYG00000003483) si:ch211-195b13.1 (ENSPNYG00000003593) eya3 (ENSPNYG00000003636) ENSPNYG00000003673 ENSPNYG00000003687 ENSPNYG00000003695 ENSPNYG00000003706 xkr8.3 (ENSPNYG00000003734) srsf4 (ENSPNYG00000003796) msto1 (ENSPNYG00000003813) apoea (ENSPNYG00000003836) apoa4a (ENSPNYG00000003848) apoa4a (ENSPNYG00000003912) tomm40l (ENSPNYG00000003936) ENSPNYG00000003986 Burton s mouthbrooder MODERN SPECIES 617 ENSHBUG00000017064 zc3h12ab (ENSHBUG00000017076) smim13 (ENSHBUG00000017088) ENSHBUG00000017097 nedd9 (ENSHBUG00000017111) TMEM170B (ENSHBUG00000017140) HIVEP1 (ENSHBUG00000017175) edn1 (ENSHBUG00000017196) si:dkeyp-92c9.2 (ENSHBUG00000017206) ##22 myo1g (ENSHBUG00000017271) si:ch211-195b13.1 (ENSHBUG00000017345) eya3 (ENSHBUG00000017380) Lyretail cichlid MODERN SPECIES 322 meaf6 (ENSNBRG00000014080) stpg1 (ENSNBRG00000014134) map7d1b (ENSNBRG00000014183) thrap3b (ENSNBRG00000014237) eva1bb (ENSNBRG00000014294) LSM10 (ENSNBRG00000014306) oscp1a (ENSNBRG00000014319) ENSNBRG00000014359 zc3h12ab (ENSNBRG00000014376) smim13 (ENSNBRG00000014425) nedd9 (ENSNBRG00000014432) ENSNBRG00000014486 TMEM170B (ENSNBRG00000014493) HIVEP1 (ENSNBRG00000014508) edn1 (ENSNBRG00000014550) si:dkeyp-92c9.2 (ENSNBRG00000014568) ##22 myo1g (ENSNBRG00000014579) si:ch211-195b13.1 (ENSNBRG00000014644) eya3 (ENSNBRG00000014682) ENSNBRG00000014701 ENSNBRG00000014712 ENSNBRG00000014719 ENSNBRG00000014739 ENSNBRG00000014792 xkr8.3 (ENSNBRG00000014803) ENSNBRG00000014840 srsf4 (ENSNBRG00000014848) msto1 (ENSNBRG00000014860) ENSNBRG00000014926 apoa4a (ENSNBRG00000015028) tomm40l (ENSNBRG00000015051) Nile tilapia MODERN SPECIES 13 LSM10 (ENSONIG00000020904) oscp1a (ENSONIG00000013682) ENSONIG00000032030 ENSONIG00000039124 ENSONIG00000013684 ENSONIG00000028012 ENSONIG00000032847 ENSONIG00000035261 zc3h12ab (ENSONIG00000013685) smim13 (ENSONIG00000042839) nedd9 (ENSONIG00000013688) ENSONIG00000027700 tmem170b (ENSONIG00000027709) HIVEP1 (ENSONIG00000013692) edn1 (ENSONIG00000033264) si:dkeyp-92c9.2 (ENSONIG00000040868) ##22 myo1g (ENSONIG00000013698) ENSONIG00000039278 si:ch211-195b13.1 (ENSONIG00000013703) eya3 (ENSONIG00000013708) ENSONIG00000038308 ENSONIG00000018048 ENSONIG00000032663 ENSONIG00000013725 ENSONIG00000033654 ENSONIG00000033056 ENSONIG00000013727 ENSONIG00000031829 ENSONIG00000028586 xkr8.3 (ENSONIG00000041635) ENSONIG00000030407 Midas cichlid MODERN SPECIES 924 zc3h12ab (ENSACIG00000004135) smim13 (ENSACIG00000004122) nedd9 (ENSACIG00000004073) TMEM170B (ENSACIG00000004056) HIVEP1 (ENSACIG00000004025) edn1 (ENSACIG00000003984) si:dkeyp-92c9.2 (ENSACIG00000003977) ##22 myo1g (ENSACIG00000003914) Percomorphaceae_C ANCESTRAL SPECIES 15 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Eupercaria ANCESTRAL SPECIES 11 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Eupecaria_A ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 Ballan wrasse MODERN SPECIES 178 stpg1 (ENSLBEG00000017959) map7d1b (ENSLBEG00000017860) thrap3b (ENSLBEG00000017803) eva1bb (ENSLBEG00000017790) LSM10 (ENSLBEG00000017764) ENSLBEG00000017744 oscp1a (ENSLBEG00000017707) ENSLBEG00000017687 ENSLBEG00000017654 zc3h12ab (ENSLBEG00000017593) smim13 (ENSLBEG00000017560) nedd9 (ENSLBEG00000017548) TMEM170B (ENSLBEG00000017533) HIVEP1 (ENSLBEG00000017512) edn1 (ENSLBEG00000017479) si:dkeyp-92c9.2 (ENSLBEG00000017467) ##22 myo1g (ENSLBEG00000017408) si:ch211-195b13.1 (ENSLBEG00000017306) eya3 (ENSLBEG00000017242) ENSLBEG00000017191 xkr8.3 (ENSLBEG00000017172) ENSLBEG00000017163 ENSLBEG00000017144 msto1 (ENSLBEG00000017083) ENSLBEG00000017038 apoa4a (ENSLBEG00000017006) ENSLBEG00000016983 tomm40l (ENSLBEG00000016955) ENSLBEG00000016890 lipea (ENSLBEG00000016855) ENSLBEG00000016376 Eupecaria_B ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Perciformes ANCESTRAL SPECIES 11 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00990000204044 Cottioidei ANCESTRAL SPECIES 16 ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00530000064067 ENSGT00940000165835.b ENSGT00390000003308.a.b ENSGT00950000182929.B.a.b.d ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.b.a ENSGT00730000111056.h ENSGT00940000158616 ENSGT00390000015518 Lumpfish MODERN SPECIES 2 meaf6 (ENSCLMG00005022124) stpg1 (ENSCLMG00005022122) map7d1b (ENSCLMG00005022121) thrap3b (ENSCLMG00005022119) eva1bb (ENSCLMG00005022118) LSM10 (ENSCLMG00005022117) oscp1a (ENSCLMG00005022114) zc3h12ab (ENSCLMG00005022113) smim13 (ENSCLMG00005022112) nedd9 (ENSCLMG00005022110) TMEM170B (ENSCLMG00005022109) HIVEP1 (ENSCLMG00005022108) ENSCLMG00005022107 ENSCLMG00005022106 edn1 (ENSCLMG00005022105) si:dkeyp-92c9.2 (ENSCLMG00005022104) ##22 myo1g (ENSCLMG00005021011) si:ch211-195b13.1 (ENSCLMG00005020929) eya3 (ENSCLMG00005020894) ENSCLMG00005020890 xkr8.3 (ENSCLMG00005020889) srsf4 (ENSCLMG00005020887) msto1 (ENSCLMG00005020886) ENSCLMG00005020871 tomm40l (ENSCLMG00005020857) ENSCLMG00005020856 apoa4a (ENSCLMG00005020850) apoea (ENSCLMG00005020828) lipea (ENSCLMG00005020825) slc9a3.2 (ENSCLMG00005019798) olah (ENSCLMG00005019788) Stickleback MODERN SPECIES 9 ENSGACG00000002285 ENSGACG00000002289 ints8 (ENSGACG00000002293) CCNE2 (ENSGACG00000002312) ENSGACG00000002315 gdf6b (ENSGACG00000002318) thrap3b (ENSGACG00000002319) eva1bb (ENSGACG00000002327) LSM10 (ENSGACG00000002329) oscp1a (ENSGACG00000002331) ENSGACG00000002336 zc3h12ab (ENSGACG00000002341) nedd9 (ENSGACG00000002344) TMEM170B (ENSGACG00000002349) HIVEP1 (ENSGACG00000002352) si:dkeyp-92c9.2 (ENSGACG00000002355) ##22 myo1g (ENSGACG00000002357) ENSGACG00000002361 si:ch211-195b13.1 (ENSGACG00000002364) eya3 (ENSGACG00000002372) ENSGACG00000002382 xkr8.3 (ENSGACG00000002383) srsf4 (ENSGACG00000002389) msto1 (ENSGACG00000002391) ENSGACG00000002413 tomm40l (ENSGACG00000002417) apoa4a (ENSGACG00000002429) ENSGACG00000002431 apoea (ENSGACG00000002433) lipea (ENSGACG00000002442) slc9a3.2 (ENSGACG00000002446) Perciformes_a ANCESTRAL SPECIES 14 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00990000204044 Pike perch MODERN SPECIES 13 stpg1 (ENSSLUG00000004518) map7d1b (ENSSLUG00000004454) thrap3b (ENSSLUG00000004422) eva1bb (ENSSLUG00000004412) LSM10 (ENSSLUG00000004403) oscp1a (ENSSLUG00000004327) ENSSLUG00000004314 ENSSLUG00000004309 ENSSLUG00000004301 zc3h12ab (ENSSLUG00000004297) smim13 (ENSSLUG00000004292) nedd9 (ENSSLUG00000004286) TMEM170B (ENSSLUG00000004281) HIVEP1 (ENSSLUG00000004271) edn1 (ENSSLUG00000004261) si:dkeyp-92c9.2 (ENSSLUG00000004255) ##22 myo1g (ENSSLUG00000004127) si:ch211-195b13.1 (ENSSLUG00000002579) eya3 (ENSSLUG00000002128) ENSSLUG00000002075 xkr8.3 (ENSSLUG00000002071) ENSSLUG00000002063 srsf4 (ENSSLUG00000002060) msto1 (ENSSLUG00000002049) ENSSLUG00000001981 apoa4a (ENSSLUG00000001940) ENSSLUG00000001935 tomm40l (ENSSLUG00000001923) ENSSLUG00000001875 lipea (ENSSLUG00000001833) ENSSLUG00000001822 Channel bull blenny MODERN SPECIES 2 ENSCGOG00000022052 SCGN (ENSCGOG00000022051) ENSCGOG00000022050 ENSCGOG00000022048 ENSCGOG00000022047 ENSCGOG00000022045 SCGN (ENSCGOG00000022040) MTSS1 (ENSCGOG00000022031) tmem65 (ENSCGOG00000022028) rnf139 (ENSCGOG00000022026) tatdn1 (ENSCGOG00000021980) ndufb9 (ENSCGOG00000021975) ENSCGOG00000021973 pomca (ENSCGOG00000021969) ENSCGOG00000021968 si:dkeyp-92c9.2 (ENSCGOG00000021966) ##22 myo1g (ENSCGOG00000021064) ENSCGOG00000021020 si:ch211-195b13.1 (ENSCGOG00000020983) ENSCGOG00000020979 eya3 (ENSCGOG00000020349) ENSCGOG00000020307 xkr8.3 (ENSCGOG00000020302) srsf4 (ENSCGOG00000020297) srsf4 (ENSCGOG00000020292) msto1 (ENSCGOG00000020289) ENSCGOG00000020282 apoa4a (ENSCGOG00000020227) apoa4a (ENSCGOG00000020226) tomm40l (ENSCGOG00000020166) ENSCGOG00000019756 Eupecaria_C ANCESTRAL SPECIES 13 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 Eupercaria_incertae_sedis ANCESTRAL SPECIES 10 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 European seabass MODERN SPECIES 22 fhl3b (ENSDLAG00005018713) meaf6 (ENSDLAG00005018732) stpg1 (ENSDLAG00005026697) map7d1b (ENSDLAG00005018751) thrap3b (ENSDLAG00005018774) eva1bb (ENSDLAG00005002280) LSM10 (ENSDLAG00005002297) oscp1a (ENSDLAG00005002331) ENSDLAG00005035131 zc3h12ab (ENSDLAG00005002900) smim13 (ENSDLAG00005002917) nedd9 (ENSDLAG00005002936) TMEM170B (ENSDLAG00005030210) HIVEP1 (ENSDLAG00005002969) edn1 (ENSDLAG00005002998) si:dkeyp-92c9.2 (ENSDLAG00005030433) ##22 myo1g (ENSDLAG00005003113) si:ch211-195b13.1 (ENSDLAG00005033105) eya3 (ENSDLAG00005005939) ENSDLAG00005032813 xkr8.3 (ENSDLAG00005032214) ENSDLAG00005016221 ENSDLAG00005007472 ENSDLAG00005013312 ENSDLAG00005007921 ENSDLAG00005031658 ENSDLAG00005029538 ENSDLAG00005014175 ENSDLAG00005005499 ENSDLAG00005026709 ENSDLAG00005007336 Large yellow croaker MODERN SPECIES 484 cox6b2 (ENSLCRG00005023904) slc2a3a (ENSLCRG00005023901) ENSLCRG00005023900 ENSLCRG00005023899 clcn1a (ENSLCRG00005023892) GAPDH (ENSLCRG00005023875) ENSLCRG00005023873 IFFO1 (ENSLCRG00005023872) vamp1a (ENSLCRG00005023871) chd4a (ENSLCRG00005022145) cdc42l (ENSLCRG00005021221) eno2 (ENSLCRG00005021112) tpi1a (ENSLCRG00005021080) gnb3b (ENSLCRG00005021061) ENSLCRG00005021055 si:dkeyp-92c9.2 (ENSLCRG00005021052) ##22 myo1g (ENSLCRG00005020898) si:ch211-195b13.1 (ENSLCRG00005019965) eya3 (ENSLCRG00005019698) ENSLCRG00005019648 xkr8.3 (ENSLCRG00005019647) ENSLCRG00005019645 srsf4 (ENSLCRG00005019641) msto1 (ENSLCRG00005019613) ENSLCRG00005019576 apoa4a (ENSLCRG00005019558) ENSLCRG00005019550 tomm40l (ENSLCRG00005019526) ENSLCRG00005019467 ENSLCRG00005019458 lipea (ENSLCRG00005019433) Gilthead seabream MODERN SPECIES 17 fhl3b (ENSSAUG00010004524) ppt1 (ENSSAUG00010004438) stpg1 (ENSSAUG00010004417) map7d1b (ENSSAUG00010004404) thrap3b (ENSSAUG00010004395) eva1bb (ENSSAUG00010004385) LSM10 (ENSSAUG00010004379) ENSSAUG00010004375 oscp1a (ENSSAUG00010004367) zc3h12ab (ENSSAUG00010004363) smim13 (ENSSAUG00010004360) nedd9 (ENSSAUG00010004355) TMEM170B (ENSSAUG00010004349) HIVEP1 (ENSSAUG00010004340) edn1 (ENSSAUG00010004330) si:dkeyp-92c9.2 (ENSSAUG00010004322) ##22 myo1g (ENSSAUG00010003283) si:ch211-195b13.1 (ENSSAUG00010027518) eya3 (ENSSAUG00010027490) ENSSAUG00010027488 xkr8.3 (ENSSAUG00010027487) ENSSAUG00010027486 msto1 (ENSSAUG00010027484) apoea (ENSSAUG00010027483) apoa4a (ENSSAUG00010027482) ENSSAUG00010027481 ENSSAUG00010027480 tomm40l (ENSSAUG00010027478) ENSSAUG00010027472 ENSSAUG00010027464 lipea (ENSSAUG00010027461) Tetraodontidae ANCESTRAL SPECIES 43 ENSGT00390000017955.c ENSGT00940000156790 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b.e ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00730000111056.h ENSGT00940000158616 ENSGT00390000015518 Tetraodon MODERN SPECIES 26 arpc1b (ENSTNIG00000019781) arpc1a (ENSTNIG00000019780) ENSTNIG00000019779 abcg2c (ENSTNIG00000019778) ENSTNIG00000019704 gpia (ENSTNIG00000019788) hsd17b2 (ENSTNIG00000019720) ENSTNIG00000019655 ENSTNIG00000019691 ENSTNIG00000019535 kctd15a (ENSTNIG00000019575) ENSTNIG00000019685 ENSTNIG00000019821 ENSTNIG00000019585 ENSTNIG00000019615 si:dkeyp-92c9.2 (ENSTNIG00000019642) ##22 ENSTNIG00000019682 ENSTNIG00000019493 ENSTNIG00000005577 ENSTNIG00000019550 itfg2 (ENSTNIG00000019706) ACSS3 (ENSTNIG00000019772) aip (ENSTNIG00000019731) ENSTNIG00000019584 ENSTNIG00000019454 ENSTNIG00000019523 ENSTNIG00000019716 ENSTNIG00000019784 ENSTNIG00000019767 gje1a (ENSTNIG00000019663) ENSTNIG00000019593 Fugu MODERN SPECIES 3 rragcb (ENSTRUG00000009884) fhl3b (ENSTRUG00000010010) meaf6 (ENSTRUG00000010159) map7d1b (ENSTRUG00000010226) thrap3b (ENSTRUG00000010336) eva1bb (ENSTRUG00000010516) LSM10 (ENSTRUG00000010531) ENSTRUG00000025207 ENSTRUG00000010565 smim13 (ENSTRUG00000020110) smim13 (ENSTRUG00000025620) nedd9 (ENSTRUG00000010644) TMEM170B (ENSTRUG00000024077) HIVEP1 (ENSTRUG00000010871) edn1 (ENSTRUG00000024552) si:dkeyp-92c9.2 (ENSTRUG00000011007) ##22 myo1g (ENSTRUG00000011023) si:ch211-195b13.1 (ENSTRUG00000011468) eya3 (ENSTRUG00000011700) ENSTRUG00000011802 xkr8 (ENSTRUG00000011807) ENSTRUG00000029730 srsf4 (ENSTRUG00000011891) msto1 (ENSTRUG00000022956) apoe1 (ENSTRUG00000011954) apoa-iv1 (ENSTRUG00000012268) tomm40l (ENSTRUG00000022433) ENSTRUG00000012432 ENSTRUG00000021411 lipea (ENSTRUG00000012533) slc9a3.2 (ENSTRUG00000012590) Percomorphaceae_D ANCESTRAL SPECIES 14 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d Carangaria ANCESTRAL SPECIES 14 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 Pleuronectoidei ANCESTRAL SPECIES 33 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00940000177439 ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00990000204044 ENSGT00730000111056.h Tongue sole MODERN SPECIES 9 rragcb (ENSCSEG00000010508) fhl3b (ENSCSEG00000010500) meaf6 (ENSCSEG00000010482) stpg1 (ENSCSEG00000010471) map7d1b (ENSCSEG00000010416) thrap3b (ENSCSEG00000010392) eva1bb (ENSCSEG00000010382) LSM10 (ENSCSEG00000010374) oscp1a (ENSCSEG00000010362) zc3h12ab (ENSCSEG00000010348) smim13 (ENSCSEG00000010342) nedd9 (ENSCSEG00000010325) TMEM170B (ENSCSEG00000010318) HIVEP1 (ENSCSEG00000010301) edn1 (ENSCSEG00000010290) si:dkeyp-92c9.2 (ENSCSEG00000010283) ##22 myo1g (ENSCSEG00000010242) si:ch211-195b13.1 (ENSCSEG00000010202) eya3 (ENSCSEG00000010177) ENSCSEG00000010138 ENSCSEG00000010127 xkr8.3 (ENSCSEG00000010119) srsf4 (ENSCSEG00000010058) msto1 (ENSCSEG00000009998) apoea (ENSCSEG00000009984) apoa4a (ENSCSEG00000009977) ENSCSEG00000009969 tomm40l (ENSCSEG00000009927) ENSCSEG00000009893 ENSCSEG00000009879 lipea (ENSCSEG00000009857) Turbot MODERN SPECIES 14 fhl3b (ENSSMAG00000001140) meaf6 (ENSSMAG00000001163) stpg1 (ENSSMAG00000035705) map7d1b (ENSSMAG00000001191) thrap3b (ENSSMAG00000001259) eva1bb (ENSSMAG00000001280) LSM10 (ENSSMAG00000001297) oscp1a (ENSSMAG00000001314) ENSSMAG00000021680 zc3h12ab (ENSSMAG00000001367) smim13 (ENSSMAG00000030110) nedd9 (ENSSMAG00000001395) TMEM170B (ENSSMAG00000030357) HIVEP1 (ENSSMAG00000001439) edn1 (ENSSMAG00000001461) si:dkeyp-92c9.2 (ENSSMAG00000001471) ##22 myo1g (ENSSMAG00000001483) si:ch211-195b13.1 (ENSSMAG00000001608) eya3 (ENSSMAG00000001662) ENSSMAG00000001691 xkr8.3 (ENSSMAG00000028110) ENSSMAG00000035150 ENSSMAG00000001707 ENSSMAG00000001722 ENSSMAG00000001740 ENSSMAG00000029931 apoa4a (ENSSMAG00000001753) tomm40l (ENSSMAG00000001770) ENSSMAG00000001793 lipea (ENSSMAG00000001823) slc9a3.2 (ENSSMAG00000001859) Carangaria_A ANCESTRAL SPECIES 16 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c ENSGT00950000182929.B.a.b.d ENSGT01100000265088 ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 Seriola ANCESTRAL SPECIES 42 ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.r ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.c.b ENSGT00950000182929.B.a.b.c.a ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT01050000244883.B.d ENSGT00990000204044 ENSGT00730000111056.h Greater amberjack MODERN SPECIES 94 meaf6 (ENSSDUG00000006968) stpg1 (ENSSDUG00000006981) map7d1b (ENSSDUG00000007025) thrap3b (ENSSDUG00000007054) eva1bb (ENSSDUG00000007086) LSM10 (ENSSDUG00000007090) oscp1a (ENSSDUG00000007103) ENSSDUG00000007130 ENSSDUG00000007152 zc3h12ab (ENSSDUG00000007162) smim13 (ENSSDUG00000007168) nedd9 (ENSSDUG00000007176) TMEM170B (ENSSDUG00000007203) HIVEP1 (ENSSDUG00000007210) edn1 (ENSSDUG00000007218) si:dkeyp-92c9.2 (ENSSDUG00000007223) ##22 myo1g (ENSSDUG00000007234) si:ch211-195b13.1 (ENSSDUG00000007289) eya3 (ENSSDUG00000007316) ENSSDUG00000007374 xkr8.3 (ENSSDUG00000007380) srsf4 (ENSSDUG00000007387) msto1 (ENSSDUG00000007402) apoea (ENSSDUG00000007440) apoa4a (ENSSDUG00000007452) ENSSDUG00000007465 tomm40l (ENSSDUG00000007488) ENSSDUG00000007530 ENSSDUG00000007599 lipea (ENSSDUG00000007955) slc9a3.2 (ENSSDUG00000007980) Yellowtail amberjack MODERN SPECIES 2726 edn1 (ENSSLDG00000009477) si:dkeyp-92c9.2 (ENSSLDG00000009490) ##22 myo1g (ENSSLDG00000009510) si:ch211-195b13.1 (ENSSLDG00000009629) eya3 (ENSSLDG00000009646) ENSSLDG00000009672 xkr8.3 (ENSSLDG00000009690) srsf4 (ENSSLDG00000009745) Barramundi perch MODERN SPECIES 26 nedd9 (ENSLCAG00010017438) TMEM170B (ENSLCAG00010017436) ENSLCAG00010017433 edn1 (ENSLCAG00010017431) si:dkeyp-92c9.2 (ENSLCAG00010017430) ##22 myo1g (ENSLCAG00010017422) si:ch211-195b13.1 (ENSLCAG00010017414) eya3 (ENSLCAG00010017361) ENSLCAG00010017344 xkr8.3 (ENSLCAG00010017338) srsf4 (ENSLCAG00010017332) msto1 (ENSLCAG00010017325) apoea (ENSLCAG00010017322) apoa4a (ENSLCAG00010017320) apoa4a (ENSLCAG00010017312) ENSLCAG00010017306 tomm40l (ENSLCAG00010017297) ENSLCAG00010017288 lipea (ENSLCAG00010017282) slc9a3.2 (ENSLCAG00010017274) Anabantaria ANCESTRAL SPECIES 16 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00730000111056.h ENSGT00990000204044 ENSGT00940000158616 Zig-zag eel MODERN SPECIES 2 meaf6 (ENSMAMG00000004214) stpg1 (ENSMAMG00000004237) map7d1b (ENSMAMG00000004292) thrap3b (ENSMAMG00000004348) eva1bb (ENSMAMG00000025345) ENSMAMG00000028468 oscp1a (ENSMAMG00000004443) ENSMAMG00000027271 ENSMAMG00000004529 zc3h12ab (ENSMAMG00000004483) smim13 (ENSMAMG00000028528) nedd9 (ENSMAMG00000004548) TMEM170B (ENSMAMG00000024794) HIVEP1 (ENSMAMG00000004590) edn1 (ENSMAMG00000004638) si:dkeyp-92c9.2 (ENSMAMG00000027420) ##22 myo1g (ENSMAMG00000004681) si:ch211-195b13.1 (ENSMAMG00000004750) ENSMAMG00000004793 eya3 (ENSMAMG00000004838) ENSMAMG00000004859 xkr8.3 (ENSMAMG00000004867) ENSMAMG00000026931 ENSMAMG00000005490 ENSMAMG00000026756 ENSMAMG00000005521 ENSMAMG00000024889 tomm40l (ENSMAMG00000005540) ENSMAMG00000005559 ENSMAMG00000005609 slc9a3.2 (ENSMAMG00000005643) Anabantoidei ANCESTRAL SPECIES 19 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000064067 ENSGT00950000182929.B.b.a ENSGT00950000182929.B.a.b.d ENSGT00390000003308.a.b ENSGT00940000165835.b ENSGT00730000111056.h ENSGT00990000204044 ENSGT00940000158616 Siamese fighting fish MODERN SPECIES 2 fhl3b (ENSBSLG00000021855) meaf6 (ENSBSLG00000021881) stpg1 (ENSBSLG00000021909) map7d1b (ENSBSLG00000021935) thrap3b (ENSBSLG00000021994) eva1bb (ENSBSLG00000022015) LSM10 (ENSBSLG00000022026) oscp1a (ENSBSLG00000022029) ENSBSLG00000022042 ENSBSLG00000022051 smim13 (ENSBSLG00000022059) nedd9 (ENSBSLG00000022070) TMEM170B (ENSBSLG00000022084) HIVEP1 (ENSBSLG00000022092) edn1 (ENSBSLG00000022107) si:dkeyp-92c9.2 (ENSBSLG00000022111) ##22 myo1g (ENSBSLG00000022131) si:ch211-195b13.1 (ENSBSLG00000022497) eya3 (ENSBSLG00000023364) ENSBSLG00000023444 xkr8.3 (ENSBSLG00000002359) ENSBSLG00000002379 srsf4 (ENSBSLG00000002398) msto1 (ENSBSLG00000002428) ENSBSLG00000002456 ENSBSLG00000002482 apoa4a (ENSBSLG00000002493) tomm40l (ENSBSLG00000002529) ENSBSLG00000002632 lipea (ENSBSLG00000002826) ENSBSLG00000002847 Climbing perch MODERN SPECIES 2 fhl3b (ENSATEG00000006513) meaf6 (ENSATEG00000006466) stpg1 (ENSATEG00000006457) map7d1b (ENSATEG00000006432) thrap3b (ENSATEG00000006350) eva1bb (ENSATEG00000006328) LSM10 (ENSATEG00000006310) oscp1a (ENSATEG00000006263) ENSATEG00000006247 zc3h12ab (ENSATEG00000006140) smim13 (ENSATEG00000006130) nedd9 (ENSATEG00000006076) TMEM170B (ENSATEG00000028130) HIVEP1 (ENSATEG00000005949) edn1 (ENSATEG00000026028) si:dkeyp-92c9.2 (ENSATEG00000005914) ##22 myo1g (ENSATEG00000005817) si:ch211-195b13.1 (ENSATEG00000028776) eya3 (ENSATEG00000005730) ENSATEG00000005722 xkr8.3 (ENSATEG00000029780) ENSATEG00000025963 ENSATEG00000028091 ENSATEG00000005668 ENSATEG00000005594 ENSATEG00000027888 apoa4a (ENSATEG00000005588) ENSATEG00000005521 tomm40l (ENSATEG00000005466) ENSATEG00000005424 ENSATEG00000027533 Protacanthopterygii ANCESTRAL SPECIES 12 ENSGT00950000183028.a.b.b ENSGT00390000015257 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00940000154096.b.b.b.b.a ENSGT00510000048364 ENSGT00390000004808.f ENSGT00390000010118.c.a.b ENSGT00940000155107.a.a.b ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D ENSGT00390000008812.b.a ##22 ENSGT00940000158053 ENSGT00940000164496.a.a ENSGT00950000182978.B ENSGT01090000260093.b.f ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b ENSGT00530000063698.b ENSGT00940000157833.h.a ENSGT00940000155019.a.a ENSGT01000000214440.A.a.b.a.g.b.a ENSGT00940000156139 ENSGT00970000193610 ENSGT00940000155579.b ENSGT00390000001153 Northern pike MODERN SPECIES 9 klhl38a (ENSELUG00000016921) FKBP14 (ENSELUG00000016947) ENSELUG00000016982 ENSELUG00000032187 smap2 (ENSELUG00000017011) rims3 (ENSELUG00000017025) rbbp4 (ENSELUG00000017073) ENSELUG00000000640 ENSELUG00000017134 yars1 (ENSELUG00000017171) mfsd2ab (ENSELUG00000017220) myclb (ENSELUG00000017228) trit1 (ENSELUG00000017278) ENSELUG00000017291 ENSELUG00000028500 si:dkeyp-92c9.2 (ENSELUG00000017305) ##22 myo1g (ENSELUG00000017330) ENSELUG00000029661 si:ch211-195b13.1 (ENSELUG00000017374) eya3 (ENSELUG00000017448) ENSELUG00000017470 ENSELUG00000017479 ENSELUG00000029226 xkr8.3 (ENSELUG00000017499) ENSELUG00000029227 srsf4 (ENSELUG00000017551) ENSELUG00000017560 ENSELUG00000030179 EPB41 (ENSELUG00000017623) ccn2b (ENSELUG00000000696) stx12 (ENSELUG00000017669) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 362 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ENSGT00950000183163.a.a.bb.c ENSGT00940000154096.b.b.b.b.a.b ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ENSGT00560000078630 ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424 ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ##22 ENSGT00940000158053.u Salmoninae_a ANCESTRAL SPECIES 5 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ENSGT00950000183163.a.a.bb.c ENSGT00940000154096.b.b.b.b.a.b ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424 ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ##22 ENSGT00940000158053.u ENSGT00940000164496.a.a.b ENSGT00950000182978.B.e ENSGT01090000260093.b.f.v ENSGT00390000001663.p ENSGT00940000155909.o.b.d ENSGT00940000154766.a.a.mb ENSGT00390000015121 ENSGT00940000156424.b.c.a ENSGT00940000157811.b.b.h ENSGT00950000182886.b.b.a ENSGT00940000153665.a.h ENSGT00940000161612.e ENSGT00390000014501.p ENSGT00940000166335 Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ENSGT00950000183163.a.a.bb.c ENSGT00940000154096.b.b.b.b.a.b ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.f ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ##22 ENSGT00940000158053.u ENSGT00940000164496.a.a.b ENSGT00950000182978.B.e ENSGT01090000260093.b.f.v ENSGT00390000001663.p ENSGT00940000155909.o.b.d ENSGT00940000154766.a.a.mb ENSGT00390000015121 ENSGT00940000156424.b.c.a.a ENSGT00940000157811.b.b.h ENSGT00940000153665.a.h ENSGT00940000161612.e ENSGT00390000014501.p ENSGT00940000160429.h.b.d ENSGT00940000158596.a.b.c Rainbow trout MODERN SPECIES 24 map7d1b (ENSOMYG00000008563) thrap3b (ENSOMYG00000008733) eva1bb (ENSOMYG00000008754) ENSOMYG00000054099 ENSOMYG00000008773 ENSOMYG00000008805 oscp1a (ENSOMYG00000008917) ENSOMYG00000008955 zc3h12ab (ENSOMYG00000058082) smim13 (ENSOMYG00000008986) nedd9 (ENSOMYG00000009014) TMEM170B (ENSOMYG00000048814) HIVEP1 (ENSOMYG00000009085) ENSOMYG00000074796 edn1 (ENSOMYG00000077425) si:dkeyp-92c9.2 (ENSOMYG00000009133) ##22 ENSOMYG00000049691 myo1g (ENSOMYG00000009396) ENSOMYG00000009659 si:ch211-195b13.1 (ENSOMYG00000009678) eya3 (ENSOMYG00000009816) ENSOMYG00000009907 ENSOMYG00000074220 ENSOMYG00000055447 ENSOMYG00000009944 ENSOMYG00000010320 ENSOMYG00000064132 ENSOMYG00000012155 ENSOMYG00000050486 CFAP90 (ENSOMYG00000022362) ENSOMYG00000022513 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ENSGT00950000183163.a.a.bb.c ENSGT00940000154096.b.b.b.b.a.b ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.f ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00990000212595 ENSGT00390000008812.b.a.c ##22 ENSGT00940000158053.u ENSGT00940000164496.a.a.b ENSGT00950000182978.B.e ENSGT01090000260093.b.f.v ENSGT00390000001663.p ENSGT00940000155909.o.b.d ENSGT00940000154766.a.a.mb ENSGT00390000015121 ENSGT00940000156424.b.c.a.a ENSGT00940000157811.b.b.h ENSGT00940000153665.a.h ENSGT00940000161612.e ENSGT00390000014501.p ENSGT00940000160429.h.b.d ENSGT00940000158596.a.b.c Coho salmon MODERN SPECIES 5 stpg1 (ENSOKIG00005022179) map7d1b (ENSOKIG00005022142) thrap3b (ENSOKIG00005022125) eva1bb (ENSOKIG00005022113) ENSOKIG00005022105 gstr (ENSOKIG00005022094) oscp1a (ENSOKIG00005022041) ENSOKIG00005022035 zc3h12ab (ENSOKIG00005022030) smim13 (ENSOKIG00005022016) nedd9 (ENSOKIG00005022006) TMEM170B (ENSOKIG00005021995) HIVEP1 (ENSOKIG00005021986) edn1 (ENSOKIG00005021979) ENSOKIG00005021969 si:dkeyp-92c9.2 (ENSOKIG00005021966) ##22 myo1g (ENSOKIG00005021794) si:ch211-195b13.1 (ENSOKIG00005021720) eya3 (ENSOKIG00005021312) ENSOKIG00005021280 ENSOKIG00005021276 ENSOKIG00005020835 ENSOKIG00005020741 TRIO (ENSOKIG00005018721) CFAP90 (ENSOKIG00005018492) adcy2b (ENSOKIG00005017553) TENT4A (ENSOKIG00005017365) UBE2QL1 (ENSOKIG00005017347) med10 (ENSOKIG00005017328) ENSOKIG00005017321 irx1b (ENSOKIG00005017315) Chinook salmon MODERN SPECIES 24 stpg1 (ENSOTSG00005006604) map7d1b (ENSOTSG00005006605) thrap3b (ENSOTSG00005006607) eva1bb (ENSOTSG00005006608) ENSOTSG00005006609 gstr (ENSOTSG00005006610) oscp1a (ENSOTSG00005006612) ENSOTSG00005006617 zc3h12ab (ENSOTSG00005006618) ENSOTSG00005006620 smim13 (ENSOTSG00005006622) nedd9 (ENSOTSG00005006624) TMEM170B (ENSOTSG00005006626) HIVEP1 (ENSOTSG00005006631) edn1 (ENSOTSG00005006634) si:dkeyp-92c9.2 (ENSOTSG00005006642) ##22 myo1g (ENSOTSG00005006644) si:ch211-195b13.1 (ENSOTSG00005006718) eya3 (ENSOTSG00005006724) ENSOTSG00005006739 ENSOTSG00005006740 ENSOTSG00005036142 CFAP90 (ENSOTSG00005036143) adcy2b (ENSOTSG00005036158) TENT4A (ENSOTSG00005036195) ENSOTSG00005036196 nsun2 (ENSOTSG00005036197) UBE2QL1 (ENSOTSG00005036198) med10 (ENSOTSG00005036199) irx4b (ENSOTSG00005036200) ndufs6 (ENSOTSG00005036201) Salmo ANCESTRAL SPECIES 2 ENSGT00390000015257.h ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b.e ENSGT00950000183163.a.a.bb.c ENSGT00940000154096.b.b.b.b.a.b ENSGT00940000181189 ENSGT00510000049601.j ENSGT00390000004808.f ENSGT00390000010118.c.a.b.c ENSGT00940000155107.a.a.b.d ENSGT00560000078630.h ENSGT00950000183008.a.a.a.b.g ENSGT00940000160424.c ENSGT00940000158242.k ENSGT00950000183053.D.g ENSGT00390000008812.b.a.c ##22 ENSGT00940000158053.u ENSGT00940000164496.a.a.b ENSGT00950000182978.B.e ENSGT01090000260093.b.f.v ENSGT00940000155909.o.b.d ENSGT00390000001663.p ENSGT00940000154766.a.a.mb ENSGT00390000015121 ENSGT00940000156424.b.c.a ENSGT00940000157811.b.b.h ENSGT00950000182886.b.b.a ENSGT00940000161612.e ENSGT00390000014501.p ENSGT00940000166335 ENSGT00940000160429.h.b.d River trout MODERN SPECIES 29 meaf6 (ENSSTUG00000039757) stpg1 (ENSSTUG00000039823) map7d1b (ENSSTUG00000039850) thrap3b (ENSSTUG00000039900) eva1bb (ENSSTUG00000039941) ENSSTUG00000039956 gstr (ENSSTUG00000039963) oscp1a (ENSSTUG00000039983) ENSSTUG00000040003 zc3h12ab (ENSSTUG00000040008) smim13 (ENSSTUG00000040014) nedd9 (ENSSTUG00000040022) TMEM170B (ENSSTUG00000040049) HIVEP1 (ENSSTUG00000040056) edn1 (ENSSTUG00000040060) si:dkeyp-92c9.2 (ENSSTUG00000040079) ##22 myo1g (ENSSTUG00000040110) si:ch211-195b13.1 (ENSSTUG00000040952) eya3 (ENSSTUG00000040997) ENSSTUG00000041130 ENSSTUG00000041155 ENSSTUG00000041163 grb10a (ENSSTUG00000041208) ENSSTUG00000041861 trioa (ENSSTUG00000042009) CFAP90 (ENSSTUG00000043315) adcy2b (ENSSTUG00000043336) TENT4A (ENSSTUG00000043907) srd5a1 (ENSSTUG00000043932) UBE2QL1 (ENSSTUG00000043938) med10 (ENSSTUG00000043944) Atlantic salmon MODERN SPECIES 5 meaf6 (ENSSSAG00000009744) stpg1 (ENSSSAG00000009729) map7d1b (ENSSSAG00000009702) thrap3b (ENSSSAG00000009695) CA078 (ENSSSAG00000009689) ENSSSAG00000106209 oscp1a (ENSSSAG00000009407) ENSSSAG00000009391 zc3h12ab (ENSSSAG00000087542) ENSSSAG00000092580 nedd9 (ENSSSAG00000009361) TMEM170B (ENSSSAG00000112888) HIVEP1 (ENSSSAG00000009332) edn1 (ENSSSAG00000119261) ENSSSAG00000119580 si:dkeyp-92c9.2 (ENSSSAG00000103119) ##22 myo1g (ENSSSAG00000008639) si:ch211-195b13.1 (ENSSSAG00000008591) ENSSSAG00000087922 eya3 (ENSSSAG00000008572) ENSSSAG00000008556 ENSSSAG00000117054 ENSSSAG00000088706 ENSSSAG00000007211 CFAP90 (ENSSSAG00000007123) adcy2b (ENSSSAG00000004802) TENT4A (ENSSSAG00000004361) ube2ql1 (ENSSSAG00000004320) MED10 (ENSSSAG00000074847) irx1 (ENSSSAG00000074846) irx4b (ENSSSAG00000074845) Huchen MODERN SPECIES 249 stpg1 (ENSHHUG00000029428) map7d1b (ENSHHUG00000029434) thrap3b (ENSHHUG00000029460) eva1bb (ENSHHUG00000029470) ENSHHUG00000029474 gstr (ENSHHUG00000029478) oscp1a (ENSHHUG00000029498) ENSHHUG00000029507 zc3h12ab (ENSHHUG00000029509) ENSHHUG00000029512 nedd9 (ENSHHUG00000029518) TMEM170B (ENSHHUG00000029522) HIVEP1 (ENSHHUG00000029527) edn1 (ENSHHUG00000029529) ENSHHUG00000029540 si:dkeyp-92c9.2 (ENSHHUG00000029553) ##22 ENSHHUG00000029556 Salmoninae ANCESTRAL SPECIES 513 ENSGT00950000182941.a.a.b.e.b.f ENSGT00950000183163.a.a.bb.d ENSGT00940000154096.b.b.b.b.a.a ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ##22 ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a ENSGT00940000156213.q.b.b ENSGT00530000063698.b.k.a ENSGT00940000157833.h.a.c.b ENSGT01000000214440.A.a.b.a.g.a Salmoninae_a ANCESTRAL SPECIES 28 ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ENSGT00950000183163.a.a.bb.d ENSGT00940000154096.b.b.b.b.a.a ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ##22 ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a.a.b ENSGT00940000156213.q.a.b ENSGT00940000156213.q.b.b ENSGT00530000063698.b.k.a ENSGT00940000157833.h.a.c.b ENSGT00940000155019.a.a.c.a.b ENSGT01000000214440.A.a.b.a.g.b.a.d ENSGT00940000156139.c.a ENSGT00940000155579.b.a ENSGT00970000193610 Salmo ANCESTRAL SPECIES 2 ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ENSGT00950000183163.a.a.bb.d ENSGT00940000154096.b.b.b.b.a.a ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000160424.d ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ##22 ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a.a.b ENSGT00530000063698.b.k.a ENSGT00940000157833.h.a.c.b ENSGT01000000214440.A.a.b.a.g.a ENSGT00940000156139.c.a ENSGT00940000155579.b.a ENSGT00970000193610 ENSGT00390000001153.kb ENSGT00940000159890 ENSGT00530000063632.B.a.e Atlantic salmon MODERN SPECIES 19 map7d1b (ENSSSAG00000065668) ENSSSAG00000120157 ENSSSAG00000107737 thrap3b (ENSSSAG00000065686) ENSSSAG00000112097 eva1bb (ENSSSAG00000065693) ENSSSAG00000097800 ENSSSAG00000082376 zc3h12ab (ENSSSAG00000065703) ENSSSAG00000065705 nedd9 (ENSSSAG00000065717) TMEM170B (ENSSSAG00000113777) HIVEP1 (ENSSSAG00000065742) edn1 (ENSSSAG00000101758) ENSSSAG00000115447 si:dkeyp-92c9.2 (ENSSSAG00000100702) ##22 myo1g (ENSSSAG00000065838) si:ch211-195b13.1 (ENSSSAG00000070370) eya3 (ENSSSAG00000070408) ENSSSAG00000092923 xkr8.3 (ENSSSAG00000070918) ENSSSAG00000092963 srsf4 (ENSSSAG00000070928) ENSSSAG00000070955 ENSSSAG00000090179 ENSSSAG00000119531 ENSSSAG00000103234 ccn2b (ENSSSAG00000044477) stx12 (ENSSSAG00000044454) ENSSSAG00000108217 trnau1apa (ENSSSAG00000071476) River trout MODERN SPECIES 27 thrap3b (ENSSTUG00000049859) eva1bb (ENSSTUG00000049862) ENSSTUG00000049864 ENSSTUG00000049865 zc3h12ab (ENSSTUG00000049867) ENSSTUG00000049870 ENSSTUG00000049873 smim13 (ENSSTUG00000049875) nedd9 (ENSSTUG00000049876) TMEM170B (ENSSTUG00000049879) ENSSTUG00000049882 ENSSTUG00000049883 HIVEP1 (ENSSTUG00000049885) edn1 (ENSSTUG00000049892) ENSSTUG00000049896 si:dkeyp-92c9.2 (ENSSTUG00000049897) ##22 myo1g (ENSSTUG00000011213) si:ch211-195b13.1 (ENSSTUG00000012532) eya3 (ENSSTUG00000012631) ENSSTUG00000012927 xkr8.3 (ENSSTUG00000012936) ENSSTUG00000012942 srsf4 (ENSSTUG00000012957) ENSSTUG00000012966 EPB41 (ENSSTUG00000013014) ENSSTUG00000013603 trnau1apa (ENSSTUG00000013643) sacm1la (ENSSTUG00000013754) ENSSTUG00000014824 ppp1r11 (ENSSTUG00000014833) vars2 (ENSSTUG00000014912) Oncorhynchus ANCESTRAL SPECIES 29 ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ENSGT00950000183163.a.a.bb.d ENSGT00940000154096.b.b.b.b.a.a ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000160424.e.a ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ##22 ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a.a.b ENSGT00940000156213.q.a.b ENSGT00940000156213.q.b.b ENSGT00530000063698.b.k.a ENSGT00940000157833.h.a.c.b ENSGT00940000155019.a.a.c.a.b.a ENSGT01000000214440.A.a.b.a.g.b.a.d ENSGT00940000156139.c.a ENSGT00940000155579.b.a ENSGT00970000193610.f Rainbow trout MODERN SPECIES 9 ENSOMYG00000038158 ENSOMYG00000038213 thrap3b (ENSOMYG00000038293) ENSOMYG00000064147 eva1bb (ENSOMYG00000065233) ENSOMYG00000038361 ENSOMYG00000038370 zc3h12ab (ENSOMYG00000038385) ENSOMYG00000061150 smim13 (ENSOMYG00000038404) nedd9 (ENSOMYG00000038414) TMEM170B (ENSOMYG00000050599) HIVEP1 (ENSOMYG00000038495) ENSOMYG00000077522 edn1 (ENSOMYG00000038507) si:dkeyp-92c9.2 (ENSOMYG00000038524) ##22 myo1g (ENSOMYG00000076588) si:ch211-195b13.1 (ENSOMYG00000038591) eya3 (ENSOMYG00000038611) ENSOMYG00000038623 xkr8.3 (ENSOMYG00000038625) ENSOMYG00000038642 srsf4 (ENSOMYG00000064017) ENSOMYG00000038656 ENSOMYG00000038681 ENSOMYG00000070751 ENSOMYG00000056732 ccn2b (ENSOMYG00000004892) stx12 (ENSOMYG00000038744) ENSOMYG00000050234 ENSOMYG00000055454 Oncorhynchus_a ANCESTRAL SPECIES 29 ENSGT00940000158787.h.b ENSGT01090000260070.C.b.c ENSGT00390000017974.ob.e ENSGT00950000183028.a.b.b.e ENSGT00390000015257.g ENSGT00950000182941.a.a.b.e.b.f ENSGT00950000183163.a.a.bb.d ENSGT00940000154096.b.b.b.b.a.a ENSGT00390000010118.c.a.b.d ENSGT00940000155107.a.a.b.c ENSGT00940000156772.b.d.a ENSGT00560000078630.g ENSGT00950000183008.a.a.a.b.h ENSGT00940000158242.l ENSGT00950000183053.D.h ENSGT00390000008812.b.a.d ##22 ENSGT00940000158053.v ENSGT00940000164496.a.a.a ENSGT00950000182978.B.f ENSGT01090000260093.b.f.u ENSGT01090000260093.b.e ENSGT00940000156213.q.a.a.b ENSGT00530000063698.b.k.a ENSGT00940000157833.h.a.c.b ENSGT00940000155019.a.a.c.a.b.a ENSGT01000000214440.A.a.b.a.g.b.a.d ENSGT00940000156139.c.a ENSGT00940000155579.b.a ENSGT00970000193610.f ENSGT00390000001153.kb ENSGT00940000159890 Coho salmon MODERN SPECIES 8 fhl3b (ENSOKIG00005008474) meaf6 (ENSOKIG00005008377) ENSOKIG00005008358 map7d1b (ENSOKIG00005008325) thrap3b (ENSOKIG00005008296) eva1bb (ENSOKIG00005008280) ENSOKIG00005008272 ENSOKIG00005008256 zc3h12ab (ENSOKIG00005008248) ENSOKIG00005008239 smim13 (ENSOKIG00005008230) nedd9 (ENSOKIG00005008220) ENSOKIG00005008209 HIVEP1 (ENSOKIG00005008183) edn1 (ENSOKIG00005008167) si:dkeyp-92c9.2 (ENSOKIG00005008159) ##22 myo1g (ENSOKIG00005008044) si:ch211-195b13.1 (ENSOKIG00005007972) eya3 (ENSOKIG00005007614) ENSOKIG00005007588 xkr8.3 (ENSOKIG00005007583) srsf4 (ENSOKIG00005007577) ENSOKIG00005007574 ENSOKIG00005007565 ENSOKIG00005007562 ENSOKIG00005007542 ENSOKIG00005004680 ccn2b (ENSOKIG00005004370) stx12 (ENSOKIG00005004326) trnau1apa (ENSOKIG00005004268) SACM1L (ENSOKIG00005033751) Chinook salmon MODERN SPECIES 81 si:dkeyp-92c9.2 (ENSOTSG00005042209) ##22 ENSOTSG00005042208 myo1g (ENSOTSG00005042207) Huchen MODERN SPECIES 3000 si:dkeyp-92c9.2 (ENSHHUG00000050021) ##22 myo1g (ENSHHUG00000049973) Osteoglossiformes ANCESTRAL SPECIES 1 ENSGT00950000182894.D ENSGT00940000156338.b ENSGT00390000017974.ob ENSGT00950000183028.a.b.b ENSGT00390000011598 ENSGT00950000182941.a.a.b.e.b ENSGT00950000183163.a.a.bb ENSGT00390000010118.c.a.b ENSGT00390000004808.f ENSGT00510000048364 ENSGT00560000078630 ENSGT00950000183008.a.a.a.b ENSGT00940000160424 ENSGT00940000158242 ENSGT00950000183053.D.b ENSGT00390000008812.b.a ##22 ENSGT00940000158053.r ENSGT01100000263475.f.b.b ENSGT00940000173852 ENSGT00940000164496.a.a.i ENSGT00950000182978.B ENSGT01090000260093.b.e ENSGT00940000156213 ENSGT00530000063698.b.a ENSGT00940000157833.h.a ENSGT01000000214440.A.a.b.a.g.a ENSGT00940000156139 ENSGT00940000166598 ENSGT00390000007371.e ENSGT00390000016565.h ENSGT00940000155361 P. kingsleyae MODERN SPECIES 13 tekt2 (ENSPKIG00000003234) slc9a1b (ENSPKIG00000003284) srsf10b (ENSPKIG00000003304) ENSPKIG00000003346 mycbp (ENSPKIG00000003459) fhl3b (ENSPKIG00000003480) stpg1 (ENSPKIG00000003521) map7d1b (ENSPKIG00000003598) thrap3b (ENSPKIG00000003697) LSM10 (ENSPKIG00000003728) smim13 (ENSPKIG00000003755) nedd9 (ENSPKIG00000003771) TMEM170B (ENSPKIG00000003794) HIVEP1 (ENSPKIG00000003860) edn1 (ENSPKIG00000003920) si:dkeyp-92c9.2 (ENSPKIG00000003949) ##22 myo1g (ENSPKIG00000003975) ENSPKIG00000004118 ENSPKIG00000004298 Asian bonytongue MODERN SPECIES 15 tekt2 (ENSSFOG00015002930) slc9a1b (ENSSFOG00015002622) thrap3b (ENSSFOG00015002576) ENSSFOG00015026830 ENSSFOG00015002542 ENSSFOG00015028838 OSCP1 (ENSSFOG00015019909) LSM10 (ENSSFOG00015019954) smim13 (ENSSFOG00015019966) nedd9 (ENSSFOG00015019973) TMEM170B (ENSSFOG00015019988) HIVEP1 (ENSSFOG00015020001) ENSSFOG00015029250 EDN1 (ENSSFOG00015020014) ENSSFOG00015029459 si:dkeyp-92c9.2 (ENSSFOG00015028986) ##22 myo1g (ENSSFOG00015020082) si:ch211-195b13.1 (ENSSFOG00015020217) eya3 (ENSSFOG00015020249) xkr8.3 (ENSSFOG00015020275) ENSSFOG00015020292 ENSSFOG00015025667 ENSSFOG00015028121 EPB41 (ENSSFOG00015020329) ENSSFOG00015020349 TMEM222 (ENSSFOG00015033128) KDF1 (ENSSFOG00015031777) ENSSFOG00015031709 ARID1A (ENSSFOG00015020409) zdhhc18b (ENSSFOG00015020442) ENSSFOG00015020468 Spotted gar MODERN SPECIES 649 btd (ENSLOCG00000006069) ANKRD28 (ENSLOCG00000006030) GALNT15 (ENSLOCG00000006018) ENSLOCG00000006002 ENSLOCG00000005972 DPY19L4 (ENSLOCG00000005956) gbp (ENSLOCG00000018330) KCNV1 (ENSLOCG00000005940) dek (ENSLOCG00000005923) KDM1B (ENSLOCG00000005898) aldh5a1 (ENSLOCG00000005880) KIAA0319 (ENSLOCG00000005830) tdp2b (ENSLOCG00000005817) tonsl (ENSLOCG00000005779) cyhr1 (ENSLOCG00000005765) si:dkeyp-92c9.2 (ENSLOCG00000018329) ##22 myo1g (ENSLOCG00000005748) ENSLOCG00000005734 TBRG4 (ENSLOCG00000005721) ENSLOCG00000005704 ccdc12 (ENSLOCG00000005683) NBEAL2 (ENSLOCG00000005650) ENSLOCG00000005615 SETD2 (ENSLOCG00000005590) ENSLOCG00000005560 ENSLOCG00000005549 IQANK1 (ENSLOCG00000005531) fam83hb (ENSLOCG00000005513) ENSLOCG00000005498 ENSLOCG00000005455 tex10 (ENSLOCG00000005439) Elephant shark MODERN SPECIES 2122 ENSCMIG00000011466 si:dkeyp-92c9.2 (ENSCMIG00000011475) ##22 Cyclostomata ANCESTRAL SPECIES 1114 ENSGT00390000008812.b #22 ENSGT00940000168666 Hagfish DUPLICATION Hagfish MODERN SPECIES 950 ENSEBUG00000013010 ENSEBUG00000002506 SF3B1 (ENSEBUG00000004325) COQ10A (ENSEBUG00000008699) CDK5R1 (ENSEBUG00000011493) #22 ENSEBUG00000000710 myo1g (ENSEBUG00000011501) ENSEBUG00000012435 ENSEBUG00000003466 ENSEBUG00000008127 ENSEBUG00000016550 ENSEBUG00000007500 ENSEBUG00000001996 ENSEBUG00000004353 ENSEBUG00000002473 ENSEBUG00000016962 Hagfish MODERN SPECIES 680 ENSEBUG00000016996 ift20 (ENSEBUG00000016655) kctd10 (ENSEBUG00000013678) ENSEBUG00000001865 USP32 (ENSEBUG00000016737) ENSEBUG00000006359 ENSEBUG00000013899 ENSEBUG00000003369 ENSEBUG00000013058 ENSEBUG00000015185 ENSEBUG00000000897 ENSEBUG00000000990 ENSEBUG00000008355 ccdc47 (ENSEBUG00000002946) ENSEBUG00000000724 ##21 ENSEBUG00000013907 #22 ENSEBUG00000009192 ENSEBUG00000016714 lsm5 (ENSEBUG00000008540) ENSEBUG00000008780 ENSEBUG00000001787 ENSEBUG00000001884 ENSEBUG00000008453 upp1 (ENSEBUG00000016113) ENSEBUG00000012387 ENSEBUG00000006979 ENSEBUG00000010183 DCLK3 (ENSEBUG00000004322) ENSEBUG00000015444 ENSEBUG00000016239 ENSEBUG00000009611 Lamprey MODERN SPECIES 1777 cdk5r1b (ENSPMAG00000009642) #22 ENSPMAG00000009643 Vertebrata ANCESTRAL SPECIES ENSGT00390000008812.a ##22 Gnathostomata ANCESTRAL SPECIES 938 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 Elephant shark MODERN SPECIES 1701 trip11 (ENSCMIG00000013012) fbln5 (ENSCMIG00000012982) tc2n (ENSCMIG00000012965) ENSCMIG00000012950 ENSCMIG00000012942 dlst (ENSCMIG00000012897) ENSCMIG00000012871 ENSCMIG00000012865 ENSCMIG00000012860 fcf1 (ENSCMIG00000012844) AREL1 (ENSCMIG00000012772) ENSCMIG00000012770 ENSCMIG00000012769 ENSCMIG00000012768 WNT6 (ENSCMIG00000012764) cdk5r2b (ENSCMIG00000012761) ##22 fev (ENSCMIG00000012760) cryba2b (ENSCMIG00000012759) Euteleostomi ANCESTRAL SPECIES 106 ENSGT00390000016794 ENSGT00940000153309 ENSGT00940000166665 ENSGT01030000234555.b ENSGT00940000153648.a ENSGT00530000065055 ENSGT01050000244890.a.b.a ENSGT00940000154101.a ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 Actinopterygii ANCESTRAL SPECIES ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000181222 ENSGT00530000065055 ENSGT01050000244890.a.b.a ENSGT00940000158887 ENSGT00940000154101.a ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000009987 ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b ENSGT00390000001718 Neopterygii ANCESTRAL SPECIES 1 ENSGT01030000234618.F ENSGT01050000244824.D.b ENSGT00940000181222 ENSGT00530000065055 ENSGT01050000244890.a.b.a ENSGT00940000158887 ENSGT00940000154101.a ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248 ENSGT00390000012731.a.b ENSGT00390000017916 ENSGT00940000156832 ENSGT00950000183570 ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000009987 ENSGT00390000010523.c.b Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 6 ENSGT00940000158887 ENSGT00940000154101.a ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155248.wb ENSGT00390000012731.a.b.j ENSGT00940000166969.a ENSGT00940000155248.vb ENSGT00390000012731.a.b.i ENSGT00390000017916 ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 104 ENSGT00530000065055 ENSGT01050000244890.a.b.a.i.a ENSGT00940000158887 ENSGT00940000154101.a ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b.b ENSGT00940000159281 ENSGT00940000160299.b ENSGT00390000008812.a.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.j ENSGT00390000001856 ENSGT00940000166969.a ENSGT00940000155248.vb.j ENSGT00390000012731.a.b.i ENSGT00390000017916 ENSGT00940000157879.y ENSGT00940000155515.a.b.b.q ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904.nb.a ENSGT00940000158904.nb.b ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q Asian bonytongue MODERN SPECIES 3 chek2 (ENSSFOG00015017747) hscb (ENSSFOG00015017691) ENSSFOG00015026844 rtn4r (ENSSFOG00015017660) ENSSFOG00015027504 ENSSFOG00015028710 hnmt (ENSSFOG00015023662) THSD7B (ENSSFOG00015023651) CXCR4 (ENSSFOG00015023648) TMBIM1 (ENSSFOG00015023638) ENSSFOG00015023636 asic4a (ENSSFOG00015023629) ENSSFOG00015023624 WNT6 (ENSSFOG00015024446) wnt10a (ENSSFOG00015023616) cdk5r2b (ENSSFOG00015023612) ##22 fev (ENSSFOG00015024628) CRYBA2 (ENSSFOG00015013272) umps (ENSSFOG00015023583) KALRN (ENSSFOG00015023487) ENSSFOG00015023442 ENSSFOG00015023438 MYLK (ENSSFOG00015023399) FMNL2 (ENSSFOG00015023356) prpf40a (ENSSFOG00015023336) rprma (ENSSFOG00015023332) GALNT13 (ENSSFOG00015032712) ENSSFOG00015033050 KCNJ3 (ENSSFOG00015026200) nr4a2a (ENSSFOG00015023308) GPD2 (ENSSFOG00015023284) P. kingsleyae MODERN SPECIES hnmt (ENSPKIG00000025650) THSD7B (ENSPKIG00000025600) CXCR4 (ENSPKIG00000025601) ENSPKIG00000025649 ENSPKIG00000025648 ASIC4 (ENSPKIG00000025609) CHPF (ENSPKIG00000025646) WNT6 (ENSPKIG00000025645) wnt10a (ENSPKIG00000025643) cdk5r2b (ENSPKIG00000025603) ##22 fev (ENSPKIG00000025641) CRYBA2 (ENSPKIG00000025672) umps (ENSPKIG00000025669) ENSPKIG00000025666 KALRN (ENSPKIG00000025626) CCDC14 (ENSPKIG00000025623) MYLK (ENSPKIG00000025683) FMNL2 (ENSPKIG00000000063) prpf40a (ENSPKIG00000000102) rprmb (ENSPKIG00000000149) GALNT13 (ENSPKIG00000000165) KCNJ3 (ENSPKIG00000000204) ATP5F1B (ENSPKIG00000000229) lrp2a (ENSPKIG00000000286) rdh1 (ENSPKIG00000000349) Osteoglossiformes ANCESTRAL SPECIES 427 ENSGT01050000244857.B.b.a ENSGT00940000160299.a ENSGT00390000008812.a.a.b ##22 ENSGT00390000008812.a.b ##22 ENSGT00940000160306.i ENSGT00940000155248.vb.i ENSGT00940000157879.z ENSGT00940000155515.a.b.b.r ENSGT00390000009987 P. kingsleyae MODERN SPECIES 35 SPOPL (ENSPKIG00000010641) THSD7B (ENSPKIG00000010687) cxcr4a (ENSPKIG00000010723) dars1 (ENSPKIG00000010740) mcm6 (ENSPKIG00000010775) si:ch73-71c20.5 (ENSPKIG00000010829) ENSPKIG00000010973 pnkd (ENSPKIG00000011208) catip (ENSPKIG00000011251) gmppaa (ENSPKIG00000011280) ENSPKIG00000011352 asic4a (ENSPKIG00000011378) CHPF (ENSPKIG00000011411) ENSPKIG00000011428 wnt10a (ENSPKIG00000011444) cdk5r2b (ENSPKIG00000011464) ##22 CRYBA2 (ENSPKIG00000011485) KALRN (ENSPKIG00000011533) MYLK (ENSPKIG00000011697) FMNL2 (ENSPKIG00000011874) ARL6IP6 (ENSPKIG00000011962) rprma (ENSPKIG00000011972) ENSPKIG00000011978 GALNT13 (ENSPKIG00000011991) KCNJ3 (ENSPKIG00000012012) NR4A2 (ENSPKIG00000012038) gpd2 (ENSPKIG00000012082) CYTIP (ENSPKIG00000012227) ENSPKIG00000012244 ENSPKIG00000012273 upp2 (ENSPKIG00000012309) Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00390000003114.e.a.a ENSGT01100000263573.b.b ENSGT00940000161090.B.c.b.b.b ENSGT00950000182846.a.a.b.b ENSGT00940000166028 ENSGT00940000164287 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155248.wb ENSGT00390000012731.a.b.j ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a Otomorpha ANCESTRAL SPECIES 39 ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT01030000234748.b ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT00940000157018.i.a ENSGT01030000234748.a ENSGT00940000157018.j ENSGT00940000154610.e.a ENSGT00940000159052.n ENSGT00940000158414 ENSGT00940000159052.m.a ENSGT01050000244857.B.b.h ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166969.a ENSGT00940000155248.wb ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00940000155515.a.a ENSGT00390000009987 ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q Otophysi ANCESTRAL SPECIES 133 ENSGT00940000159262.c ENSGT01050000244848.C.a.g ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000157018.i.a ENSGT01030000234748.a ENSGT00940000157018.j ENSGT00940000154610.e.a ENSGT00940000159052.n ENSGT00980000198631 ENSGT00940000158414 ENSGT00940000159052.m.a ENSGT01050000244857.B.b.h ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.o.b ENSGT00390000001856 ENSGT00390000017619 ENSGT00940000158361 ENSGT00390000015818 ENSGT00940000160909.f.a ENSGT00390000005923 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00510000047718.d ENSGT00950000182895.a.b.v ENSGT00390000004977.d.a Characiphysae ANCESTRAL SPECIES 115 ENSGT00940000155953.q.b ENSGT01010000225185 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262.c ENSGT01050000244848.C.a.g ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000157018.i.a ENSGT01030000234748.a ENSGT00940000154610.e.a ENSGT00940000159052.m.b.a ENSGT01050000244857.B.b.h ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.o.b ENSGT00940000175555 ENSGT00390000001856 ENSGT00390000017619 ENSGT00940000158361 ENSGT00390000015818 ENSGT00940000160909.f.a Channel catfish MODERN SPECIES 25 ugt (ENSIPUG00000009765) nxph2 (ENSIPUG00000009804) spopl (ENSIPUG00000009815) hnmt (ENSIPUG00000009871) THSD7B (ENSIPUG00000009908) cxcr4b (ENSIPUG00000010000) dars1 (ENSIPUG00000010037) ENSIPUG00000010072 GMPPA (ENSIPUG00000010119) ENSIPUG00000010304 ENSIPUG00000010315 ASIC4 (ENSIPUG00000010329) wnt6 (ENSIPUG00000010349) wnt10a (ENSIPUG00000010386) fev (ENSIPUG00000010541) cdk5r2b (ENSIPUG00000010550) ##22 cryba2b (ENSIPUG00000010561) dnajc10 (ENSIPUG00000010586) CXCR1 (ENSIPUG00000010701) ENSIPUG00000010703 arpc2 (ENSIPUG00000010711) zgc:92380 (ENSIPUG00000010795) gpbar1 (ENSIPUG00000010814) ndufb3 (ENSIPUG00000010822) ENSIPUG00000010838 DIP2A (ENSIPUG00000010931) Srpx (ENSIPUG00000011005) otc (ENSIPUG00000011057) ENSIPUG00000011102 ENSIPUG00000011141 ENSIPUG00000011251 Characiphysae_b ANCESTRAL SPECIES 247 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.o.b ENSGT00390000001856 ENSGT00390000017619 ENSGT00940000158361 ENSGT00390000015818 ENSGT00940000160909.f.a Electric eel MODERN SPECIES 940 ENSEEEG00000006053 WNT6 (ENSEEEG00000006046) wnt10a (ENSEEEG00000005863) ENSEEEG00000005862 cdk5r2b (ENSEEEG00000005860) ##22 fev (ENSEEEG00000005856) cryba2b (ENSEEEG00000005855) umps (ENSEEEG00000005854) ENSEEEG00000005852 umps (ENSEEEG00000005851) Characoidei ANCESTRAL SPECIES 216 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262.c ENSGT01050000244848.C.a.g ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT01100000263473.a.b.g.a.a.b.b.a.a.b ENSGT01030000234748.a ENSGT00940000157018.i.a ENSGT00940000154610.e.a ENSGT00940000159052.m.b.a ENSGT01050000244857.B.b.h.a ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.o.b ENSGT00390000001856 ENSGT00390000017619 ENSGT00940000158361 ENSGT00390000015818 Red-bellied piranha MODERN SPECIES 855 cdk5r2b (ENSPNAG00000012339) ##22 fev (ENSPNAG00000012344) cryba2b (ENSPNAG00000012368) umps (ENSPNAG00000012389) si:dkey-69o16.5 (ENSPNAG00000012425) Cyprinoidei ANCESTRAL SPECIES 59 ENSGT00940000159677.a.a.j ENSGT00950000182883.b.a.a ENSGT00940000155953.q.b ENSGT00390000002862.tb ENSGT00940000159262.c ENSGT01050000244848.C.a.g ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT01030000234748.a ENSGT00940000157018.j ENSGT00940000154610.e.a ENSGT00940000159052.m.a ENSGT01050000244857.B.b.h ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.o.b ENSGT00390000001856 ENSGT00390000017619 ENSGT00940000158361 ENSGT00390000015818 ENSGT00940000160909.f.a ENSGT00390000005923 ENSGT00940000157516 ENSGT00940000163412 ENSGT00940000154913 ENSGT00950000183009.db.b ENSGT00510000047718.d ENSGT00950000182895.a.b.v ENSGT00390000004977.d.a Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 232 ENSGT00940000159677.a.a.j.a ENSGT00950000182883.b.a.a.e ENSGT00940000155953.q.b.a ENSGT00390000002862.tb.f ENSGT00940000159262.c.a ENSGT01050000244848.C.a.g.b ENSGT01030000234618.F.b ENSGT01050000244890.a.b.a.i.b.a.a ENSGT01030000234748.a.a ENSGT00940000157018.j.a ENSGT00940000154610.e.a.a ENSGT00940000159052.m.a.b ENSGT01050000244857.B.b.h.c ENSGT00940000159281.i.b ENSGT00940000160299.c ENSGT00390000008812.a.a.c ##22 ENSGT00940000161562.c ENSGT00940000160306.o.b.b ENSGT01000000221414 ENSGT00940000158361.l ENSGT00390000015818.j ENSGT00940000160909.f.a.a ENSGT00390000005923.fb ENSGT00390000006618.m.a ENSGT00940000157516.b ENSGT00940000163412.d ENSGT00940000154913.bb.a ENSGT00950000183009.db.b.d ENSGT00510000047718.d.a ENSGT00950000182895.a.b.v ENSGT00390000004977.d.a Goldfish MODERN SPECIES 27 BIN1 (ENSCARG00000006506) actr5 (ENSCARG00000006789) ENSCARG00000006803 ENSCARG00000006806 ENSCARG00000006812 ENSCARG00000006818 cxcr4b (ENSCARG00000006820) dars1 (ENSCARG00000006823) TMBIM1 (ENSCARG00000006847) gmppaa (ENSCARG00000006893) ENSCARG00000006937 asic4a (ENSCARG00000006944) ENSCARG00000006956 WNT6 (ENSCARG00000006959) wnt10a (ENSCARG00000006970) cdk5r2b (ENSCARG00000006985) ##22 fev (ENSCARG00000006990) cryba2b (ENSCARG00000007008) umps (ENSCARG00000007022) ENSCARG00000007040 itgav (ENSCARG00000007174) zc3h15 (ENSCARG00000008382) ENSCARG00000008429 ENSCARG00000008431 znf804a (ENSCARG00000008433) nup35 (ENSCARG00000008446) zgc:162707 (ENSCARG00000008624) tmem41aa (ENSCARG00000008629) igf2bp2a (ENSCARG00000008723) ENSCARG00000010554 tra2b (ENSCARG00000010563) Cyprininae_a ANCESTRAL SPECIES 210 ENSGT00940000159677.a.a.j.a ENSGT00950000182883.b.a.a.e ENSGT00940000155953.q.b.a ENSGT00390000002862.tb.f ENSGT00940000159262.c.a ENSGT01050000244848.C.a.g.b ENSGT01030000234618.F.b ENSGT01050000244890.a.b.a.i.b.a.a ENSGT01030000234748.a.a ENSGT00940000157018.j.a ENSGT00940000154610.e.a.a ENSGT00940000159052.m.a.b ENSGT01050000244857.B.b.h.c ENSGT00940000159281.i.b ENSGT00940000160299.c ENSGT00390000008812.a.a.c ##22 ENSGT00940000161562.c ENSGT00940000160306.o.b.a.a ENSGT00390000001856.f ENSGT00390000017619.a ENSGT01000000221414 ENSGT00940000158361.l ENSGT00390000015818.j ENSGT00940000160909.f.a.a ENSGT00390000005923.fb ENSGT00390000006618.m.a ENSGT00940000157516.b ENSGT00940000163412.d ENSGT00940000154913.bb.a ENSGT00970000197261 ENSGT00950000183009.db.b.d Common carp reference MODERN SPECIES 41 NXPH2 (ENSCCRG00000078124) spopla (ENSCCRG00000012637) hnmt (ENSCCRG00000059985) ENSCCRG00000018451 THSD7B (ENSCCRG00000058088) cxcr4b (ENSCCRG00000042027) dars1 (ENSCCRG00000002957) ENSCCRG00000068359 ENSCCRG00000022754 gmppaa (ENSCCRG00000022742) ENSCCRG00000002626 asic4a (ENSCCRG00000045486) ENSCCRG00000082812 WNT6 (ENSCCRG00000066712) wnt10a (ENSCCRG00000011897) cdk5r2b (ENSCCRG00000062556) ##22 fev (ENSCCRG00000062040) cryba2b (ENSCCRG00000078291) umps (ENSCCRG00000000292) si:dkey-69o16.5 (ENSCCRG00000054890) itgav (ENSCCRG00000031791) zc3h15 (ENSCCRG00000054441) ENSCCRG00000057926 znf804a (ENSCCRG00000011836) zgc:162707 (ENSCCRG00000011845) tmem41aa (ENSCCRG00000043770) igf2bp2a (ENSCCRG00000082615) tra2b (ENSCCRG00000005399) ENSCCRG00000005385 ENSCCRG00000061289 ENSCCRG00000075178 Golden-line barbel MODERN SPECIES 727 asic4a (ENSSGRG00000024944) ENSSGRG00000024943 WNT6 (ENSSGRG00000024942) wnt10a (ENSSGRG00000024941) cdk5r2b (ENSSGRG00000024940) ##22 fev (ENSSGRG00000024939) cryba2b (ENSSGRG00000024935) ENSSGRG00000024933 itgav (ENSSGRG00000024640) zc3h15 (ENSSGRG00000024629) znf804a (ENSSGRG00000024628) Cyprininae ANCESTRAL SPECIES 256 ENSGT00940000155953.q.b.b ENSGT00390000002862.tb.e ENSGT00940000159262.c.b ENSGT01050000244848.C.a.g.a ENSGT01030000234618.F.a ENSGT01050000244890.a.b.a.i.b.a.b ENSGT01030000234748.a.b ENSGT00940000157018.j.b ENSGT00940000154610.e.a.b ENSGT00940000159052.n ENSGT00940000158414.i ENSGT00940000159052.m.a.a ENSGT01050000244857.B.b.h.d ENSGT00940000159281.i.a ENSGT00940000160299.d ENSGT00390000008812.a.a.d ##22 ENSGT00940000161562.d ENSGT00940000160306.o.b.a.b ENSGT00390000001856.e ENSGT00390000017619 ENSGT00940000158361.k ENSGT00390000015818.i ENSGT00940000160909.f.a.b ENSGT00390000005923.gb Goldfish MODERN SPECIES 49 ugt1a2 (ENSCARG00000008848) NXPH2 (ENSCARG00000008838) spopla (ENSCARG00000008804) hnmt (ENSCARG00000008777) THSD7B (ENSCARG00000008641) cxcr4b (ENSCARG00000008619) dars1 (ENSCARG00000008291) ENSCARG00000008250 ENSCARG00000008237 gmppaa (ENSCARG00000008196) ENSCARG00000008182 ASIC4 (ENSCARG00000008153) ENSCARG00000008149 WNT6 (ENSCARG00000008143) wnt10a (ENSCARG00000008134) cdk5r2b (ENSCARG00000008126) ##22 fev (ENSCARG00000008120) cryba2b (ENSCARG00000008111) umps (ENSCARG00000008101) si:dkey-69o16.5 (ENSCARG00000008084) itgav (ENSCARG00000003084) zc3h15 (ENSCARG00000002839) ENSCARG00000002832 znf804a (ENSCARG00000002818) ENSCARG00000002795 poglut2 (ENSCARG00000002746) ENSCARG00000002710 nepro (ENSCARG00000002692) slc10a2 (ENSCARG00000002686) ENSCARG00000002665 mid1ip1a (ENSCARG00000002657) Cyprininae_a ANCESTRAL SPECIES 95 ENSGT00950000182883.b.a.a.f ENSGT00940000155953.q.b.b ENSGT00390000002862.tb.e ENSGT00940000159262.c.b ENSGT01050000244848.C.a.g.a ENSGT01030000234618.F.a ENSGT01050000244890.a.b.a.i.b.a.b ENSGT01030000234748.a.b ENSGT00940000157018.j.b ENSGT00940000154610.e.a.b ENSGT00940000158414.i ENSGT00940000159052.m.a.a ENSGT01050000244857.B.b.h.d ENSGT00940000159281.i.a ENSGT00940000160299.d ENSGT00390000008812.a.a.d ##22 ENSGT00940000161562.d ENSGT00940000160306.o.b.a.b ENSGT00390000001856.e ENSGT00390000017619.b ENSGT00940000158361.k ENSGT00390000015818.i ENSGT00940000160909.f.a.b ENSGT00390000005923.gb ENSGT00390000006618.m.b ENSGT00940000157516.a ENSGT00940000163412.c ENSGT00940000154913.bb.b ENSGT00950000183009.db.b.c ENSGT00510000047718.d.b ENSGT00940000168354.c Common carp reference MODERN SPECIES 46 NXPH2 (ENSCCRG00000024798) spopla (ENSCCRG00000030581) hnmt (ENSCCRG00000002242) THSD7B (ENSCCRG00000080968) cxcr4b (ENSCCRG00000058981) dars1 (ENSCCRG00000022705) ENSCCRG00000077829 ENSCCRG00000033896 gmppaa (ENSCCRG00000002655) ENSCCRG00000070120 ENSCCRG00000073497 asic4a (ENSCCRG00000001540) ENSCCRG00000082513 WNT6 (ENSCCRG00000001502) wnt10a (ENSCCRG00000001485) cdk5r2b (ENSCCRG00000067815) ##22 fev (ENSCCRG00000081469) cryba2b (ENSCCRG00000026610) umps (ENSCCRG00000063159) si:dkey-69o16.5 (ENSCCRG00000059449) itgav (ENSCCRG00000075275) zc3h15 (ENSCCRG00000040561) znf804a (ENSCCRG00000065999) nup35 (ENSCCRG00000047561) zgc:162707 (ENSCCRG00000065987) ehhadh (ENSCCRG00000053679) tmem41aa (ENSCCRG00000071350) igf2bp2a (ENSCCRG00000005568) tra2b (ENSCCRG00000005547) ENSCCRG00000005578 ENSCCRG00000058730 Golden-line barbel MODERN SPECIES 805 WNT6 (ENSSGRG00000037343) wnt10a (ENSSGRG00000037342) cdk5r2b (ENSSGRG00000037341) ##22 fev (ENSSGRG00000037340) CRYBA2 (ENSSGRG00000037334) ENSSGRG00000037332 si:dkey-69o16.5 (ENSSGRG00000037331) itgav (ENSSGRG00000036698) zc3h15 (ENSSGRG00000036602) znf804a (ENSSGRG00000036598) nup35 (ENSSGRG00000036596) Zebrafish MODERN SPECIES 24 NXPH2 (ENSDARG00000063224) spopla (ENSDARG00000010563) hnmt (ENSDARG00000012796) THSD7B (ENSDARG00000095022) ENSDARG00000112156 cxcr4b (ENSDARG00000041959) dars1 (ENSDARG00000070043) ENSDARG00000109373 gmppaa (ENSDARG00000024112) ENSDARG00000116313 ENSDARG00000055934 asic4a (ENSDARG00000025162) ENSDARG00000078392 WNT6 (ENSDARG00000073935) wnt10a (ENSDARG00000017155) cdk5r2b (ENSDARG00000078671) ##22 fev (ENSDARG00000009242) cryba2b (ENSDARG00000041925) umps (ENSDARG00000012215) si:dkey-69o16.5 (ENSDARG00000070057) itgav (ENSDARG00000006314) zc3h15 (ENSDARG00000015889) znf804a (ENSDARG00000027079) nup35 (ENSDARG00000012222) C9H3orf70 (ENSDARG00000061664) ehhadh (ENSDARG00000070029) tmem41aa (ENSDARG00000070028) igf2bp2a (ENSDARG00000003421) tra2b (ENSDARG00000002168) TSPEAR (ENSDARG00000089235) sumo3b (ENSDARG00000035993) Clupeiformes ANCESTRAL SPECIES 30 ENSGT00940000155953.r ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262.c ENSGT01050000244848.C.a.g ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT01030000234748.b ENSGT00940000157018.j ENSGT01030000234748.a ENSGT00940000154610.e.a ENSGT00940000159052.m.a ENSGT01050000244857.B.b.h ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306.m ENSGT00390000001856 ENSGT00940000155248.wb ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a ENSGT00940000158842 Denticle herring MODERN SPECIES 19 ugt1a2 (ENSDCDG00000035065) ENSDCDG00000035061 NXPH2 (ENSDCDG00000035060) SPOPL (ENSDCDG00000035055) THSD7B (ENSDCDG00000035026) cxcr4b (ENSDCDG00000035005) dars1 (ENSDCDG00000035001) TMBIM1 (ENSDCDG00000034995) ENSDCDG00000034991 gmppaa (ENSDCDG00000034981) ENSDCDG00000034977 asic4a (ENSDCDG00000034973) ENSDCDG00000034968 WNT6 (ENSDCDG00000034967) wnt10a (ENSDCDG00000034953) cdk5r2b (ENSDCDG00000034948) ##22 fev (ENSDCDG00000034947) CRYBA2 (ENSDCDG00000034945) umps (ENSDCDG00000034944) KALRN (ENSDCDG00000033515) MYLK (ENSDCDG00000033418) FMNL2 (ENSDCDG00000032962) rprma (ENSDCDG00000032936) GALNT13 (ENSDCDG00000032871) prpf40a (ENSDCDG00000031823) rprma (ENSDCDG00000031741) GALNT13 (ENSDCDG00000031633) KCNJ3 (ENSDCDG00000031627) nr4a2a (ENSDCDG00000031626) ENSDCDG00000031624 GALNT5 (ENSDCDG00000031623) Atlantic herring MODERN SPECIES 11 NXPH2 (ENSCHAG00000025256) SPOPL (ENSCHAG00000025257) HNMT (ENSCHAG00000025264) hnmt (ENSCHAG00000025266) THSD7B (ENSCHAG00000025277) cxcr4b (ENSCHAG00000025343) dars1 (ENSCHAG00000025353) TMBIM1 (ENSCHAG00000025423) gmppaa (ENSCHAG00000025429) ENSCHAG00000025444 ENSCHAG00000025447 asic4a (ENSCHAG00000025459) ENSCHAG00000025469 WNT6 (ENSCHAG00000025471) wnt10a (ENSCHAG00000025473) cdk5r2b (ENSCHAG00000025475) ##22 fev (ENSCHAG00000025476) CRYBA2 (ENSCHAG00000025479) umps (ENSCHAG00000025483) ENSCHAG00000025486 KALRN (ENSCHAG00000025512) ENSCHAG00000025846 MYLK (ENSCHAG00000025851) FMNL2 (ENSCHAG00000026012) prpf40a (ENSCHAG00000026357) ENSCHAG00000026716 rprma (ENSCHAG00000026717) GALNT13 (ENSCHAG00000026719) KCNJ3 (ENSCHAG00000026736) nr4a2a (ENSCHAG00000026743) GPD2 (ENSCHAG00000026773) Euteleosteomorpha ANCESTRAL SPECIES 6 ENSGT00940000155953 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000154610.e.a ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000161753 ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00530000063734.a Acanthomorphata ANCESTRAL SPECIES 5 ENSGT00940000166954 ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.a ENSGT00950000183165.b.b.b ENSGT00940000169984 ENSGT00940000160220 ENSGT00950000183165.b.a.e.b.d.a.a.a.a ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 Euacanthomorphacea ANCESTRAL SPECIES 15 ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000160220 ENSGT00950000183165.b.a.e.b.d.a.a.a.a ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.a ENSGT00950000183165.b.b.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b Percomorphaceae ANCESTRAL SPECIES 29 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Ovalentaria ANCESTRAL SPECIES 14 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Atherinomorphae ANCESTRAL SPECIES 13 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b Aplocheiloidei ANCESTRAL SPECIES 6 ENSGT00910000144271.C.i.a.b ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b.p ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719.a ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 Mangrove rivulus MODERN SPECIES 54 ENSKMAG00000015446 rabl3 (ENSKMAG00000015464) gtf2e1 (ENSKMAG00000015502) stxbp5l (ENSKMAG00000015613) poglut2 (ENSKMAG00000015888) ENSKMAG00000015923 nepro (ENSKMAG00000015939) ENSKMAG00000015958 LRP1B (ENSKMAG00000016057) BZW1 (ENSKMAG00000016408) MYO1B (ENSKMAG00000016504) ENSKMAG00000016838 ENSKMAG00000016853 WNT6 (ENSKMAG00000016866) wnt10a (ENSKMAG00000016880) cdk5r2b (ENSKMAG00000016892) ##22 fev (ENSKMAG00000016896) cryba2b (ENSKMAG00000016906) umps (ENSKMAG00000016976) fn1a (ENSKMAG00000017093) ENSKMAG00000017534 ENSKMAG00000017559 nrp2b (ENSKMAG00000017635) epb41l5 (ENSKMAG00000017717) ptpn4a (ENSKMAG00000017779) tmem177 (ENSKMAG00000017878) mras (ENSKMAG00000017893) pth2ra (ENSKMAG00000017976) ENSKMAG00000018125 tmem163a (ENSKMAG00000018154) acmsd (ENSKMAG00000018206) Turquoise killifish MODERN SPECIES 1623 KDELC1 (ENSNFUG00015023393) nepro (ENSNFUG00015023389) LRP1B (ENSNFUG00015023175) ENSNFUG00015023153 ENSNFUG00015023152 ENSNFUG00015023150 ENSNFUG00015023148 BZW1 (ENSNFUG00015023133) MYO1B (ENSNFUG00015022959) ENSNFUG00015022925 ENSNFUG00015022917 ENSNFUG00015022884 WNT6B (ENSNFUG00015022875) wnt10a (ENSNFUG00015022870) ENSNFUG00015022866 CDK5R2B (ENSNFUG00015022863) ##22 ENSNFUG00015022860 cryba2b (ENSNFUG00015022856) umps (ENSNFUG00015022850) FN1 (ENSNFUG00015020678) ENSNFUG00015020593 ENSNFUG00015020592 ENSNFUG00015020585 ENSNFUG00015020577 nrp2b (ENSNFUG00015019291) ENSNFUG00015019259 epb41l5 (ENSNFUG00015019190) PTPN4A (ENSNFUG00015019139) TMEM177 (ENSNFUG00015019125) MRAS (ENSNFUG00015019107) pth2ra (ENSNFUG00015018783) Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b NAME_4 ANCESTRAL SPECIES 81 ENSGT00950000182906.b.b.p ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 Mummichog MODERN SPECIES 2378 stxbp5l (ENSFHEG00000007343) poglut2 (ENSFHEG00000007274) nepro (ENSFHEG00000007235) ENSFHEG00000007169 RALB (ENSFHEG00000007153) LRP1B (ENSFHEG00000007116) BZW1 (ENSFHEG00000006742) ENSFHEG00000006699 ENSFHEG00000006689 ENSFHEG00000006674 ENSFHEG00000006621 ENSFHEG00000006593 WNT6 (ENSFHEG00000006552) wnt10a (ENSFHEG00000006524) cdk5r2b (ENSFHEG00000006509) ##22 fev (ENSFHEG00000006504) cryba2b (ENSFHEG00000006489) umps (ENSFHEG00000006474) Sheepshead minnow MODERN SPECIES 500 WNT6 (ENSCVAG00000007287) wnt10a (ENSCVAG00000007307) cdk5r2b (ENSCVAG00000007323) ##22 fev (ENSCVAG00000007332) cryba2b (ENSCVAG00000007344) umps (ENSCVAG00000007359) fn1a (ENSCVAG00000011892) ENSCVAG00000011979 ENSCVAG00000011990 ENSCVAG00000012006 ENSCVAG00000012023 Poeciliinae ANCESTRAL SPECIES 25 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b Poecilia ANCESTRAL SPECIES 13 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b NAME_6 ANCESTRAL SPECIES 186 ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00900000141555 ENSGT00970000196932 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f Amazon molly MODERN SPECIES 390 stxbp5l (ENSPFOG00000000666) poglut2 (ENSPFOG00000000713) ENSPFOG00000000771 nepro (ENSPFOG00000023192) RALB (ENSPFOG00000000798) ENSPFOG00000022068 ENSPFOG00000001549 BZW1 (ENSPFOG00000003280) MYO1B (ENSPFOG00000003543) ENSPFOG00000004283 ENSPFOG00000004430 WNT6 (ENSPFOG00000004515) wnt10a (ENSPFOG00000004587) cdk5r2b (ENSPFOG00000020110) ##22 fev (ENSPFOG00000004658) cryba2b (ENSPFOG00000004669) umps (ENSPFOG00000004713) fn1a (ENSPFOG00000004906) ENSPFOG00000005693 ENSPFOG00000005714 nrp2b (ENSPFOG00000005868) epb41l5 (ENSPFOG00000006337) ptpn4a (ENSPFOG00000006586) Sailfin molly MODERN SPECIES 17 ENSPLAG00000021605 WNT6 (ENSPLAG00000021598) wnt10a (ENSPLAG00000021584) ENSPLAG00000021575 cdk5r2b (ENSPLAG00000021570) ##22 fev (ENSPLAG00000021560) cryba2b (ENSPLAG00000021553) umps (ENSPLAG00000021538) fn1a (ENSPLAG00000021511) ENSPLAG00000021418 ENSPLAG00000021402 ENSPLAG00000021390 ENSPLAG00000021379 nrp2b (ENSPLAG00000021352) ENSPLAG00000021286 Platyfish MODERN SPECIES 21 rabl3 (ENSXMAG00000003244) ENSXMAG00000027595 gtf2e1 (ENSXMAG00000011584) stxbp5l (ENSXMAG00000011580) poglut2 (ENSXMAG00000021684) ENSXMAG00000027953 nepro (ENSXMAG00000023956) RALB (ENSXMAG00000023293) LRP1B (ENSXMAG00000011528) BZW1 (ENSXMAG00000010531) MYO1B (ENSXMAG00000016513) ENSXMAG00000027035 ENSXMAG00000027986 WNT6 (ENSXMAG00000001793) wnt10a (ENSXMAG00000024708) cdk5r2b (ENSXMAG00000020059) ##22 ENSXMAG00000001805 cryba2b (ENSXMAG00000001807) umps (ENSXMAG00000001814) fn1a (ENSXMAG00000001821) ENSXMAG00000028842 ENSXMAG00000001893 nrp2b (ENSXMAG00000001898) epb41l5 (ENSXMAG00000001914) ptpn4a (ENSXMAG00000001932) tmem177 (ENSXMAG00000001961) MRAS (ENSXMAG00000001962) pth2ra (ENSXMAG00000001976) ENSXMAG00000021128 ENSXMAG00000002001 tmem163a (ENSXMAG00000007867) Oryzias ANCESTRAL SPECIES 10 ENSGT00940000155953 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 Oryzias_a ANCESTRAL SPECIES 58 ENSGT00950000182883.b.a.a ENSGT00940000155953 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00940000175678 ENSGT00940000159505 Chinese medaka MODERN SPECIES 1113 CHPF (ENSOSIG00000012568) pdxka (ENSOSIG00000012569) agpat3 (ENSOSIG00000012573) cdk5r2b (ENSOSIG00000012576) ##22 fev (ENSOSIG00000012577) cryba2b (ENSOSIG00000012579) umps (ENSOSIG00000012582) ENSOSIG00000015474 ENSOSIG00000015475 Japanese Medaka HdrR MODERN SPECIES 13 hnmt (ENSORLG00000020490) THSD7B (ENSORLG00000020495) ENSORLG00000028488 ENSORLG00000024098 cxcr4a (ENSORLG00000029079) dars1 (ENSORLG00000026356) TMBIM1 (ENSORLG00000020503) pnkd (ENSORLG00000026276) gmppaa (ENSORLG00000020513) ENSORLG00000025186 asic4a (ENSORLG00000020519) ENSORLG00000029901 CHPF (ENSORLG00000020522) pdxka (ENSORLG00000020526) agpat3 (ENSORLG00000020534) cdk5r2b (ENSORLG00000020537) ##22 fev (ENSORLG00000029519) cryba2b (ENSORLG00000020544) umps (ENSORLG00000020552) fn1a (ENSORLG00000020577) ENSORLG00000028926 ENSORLG00000029898 ENSORLG00000023693 ENSORLG00000022281 ENSORLG00000029727 ENSORLG00000026352 ENSORLG00000021788 ENSORLG00000025687 ENSORLG00000022794 ENSORLG00000028758 ENSORLG00000020849 Oryzias_b ANCESTRAL SPECIES 40 ENSGT00940000155953 ENSGT00390000002862.ub ENSGT00390000002862.tb ENSGT00940000159262 ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 Indian medaka MODERN SPECIES 18 ENSOMEG00000015657 HNMT (ENSOMEG00000015670) hnmt (ENSOMEG00000015708) THSD7B (ENSOMEG00000015867) cxcr4a (ENSOMEG00000015896) dars1 (ENSOMEG00000015997) TMBIM1 (ENSOMEG00000016060) pnkd (ENSOMEG00000016106) ENSOMEG00000016114 gmppaa (ENSOMEG00000016142) asic4a (ENSOMEG00000016180) CHPF (ENSOMEG00000016218) pdxka (ENSOMEG00000016303) agpat3 (ENSOMEG00000016351) ENSOMEG00000016384 cdk5r2b (ENSOMEG00000016402) ##22 fev (ENSOMEG00000016410) cryba2b (ENSOMEG00000016427) umps (ENSOMEG00000016459) fn1a (ENSOMEG00000016544) ENSOMEG00000016575 ENSOMEG00000016682 ENSOMEG00000016701 nrp2b (ENSOMEG00000016727) epb41l5 (ENSOMEG00000016756) ENSOMEG00000016774 ptpn4a (ENSOMEG00000016814) tmem177 (ENSOMEG00000016831) ENSOMEG00000016910 slc37a1 (ENSOMEG00000016960) wdr4 (ENSOMEG00000016985) Javanese ricefish MODERN SPECIES 13 HNMT (ENSOJAG00000023228) hnmt (ENSOJAG00000023238) THSD7B (ENSOJAG00000023324) ENSOJAG00000023450 cxcr4a (ENSOJAG00000023451) dars1 (ENSOJAG00000023468) ENSOJAG00000023512 pnkd (ENSOJAG00000023519) ENSOJAG00000023534 asic4a (ENSOJAG00000023538) ENSOJAG00000023541 CHPF (ENSOJAG00000023548) PDXK (ENSOJAG00000023552) agpat3 (ENSOJAG00000023558) ENSOJAG00000023565 ENSOJAG00000023567 ##22 fev (ENSOJAG00000023571) cryba2b (ENSOJAG00000023576) ENSOJAG00000023783 ENSOJAG00000023785 ENSOJAG00000023787 nrp2b (ENSOJAG00000023793) ENSOJAG00000023800 epb41l5 (ENSOJAG00000023802) ENSOJAG00000023812 tmem177 (ENSOJAG00000023817) ENSOJAG00000023821 slc37a1 (ENSOJAG00000023831) ENSOJAG00000023837 WDR4 (ENSOJAG00000023838) ENSOJAG00000003518 Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Pomacentridae ANCESTRAL SPECIES 17 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Pomacentridae_A ANCESTRAL SPECIES 14 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Amphiprion ANCESTRAL SPECIES 8 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Clown anemonefish MODERN SPECIES 1713 cdk5r2b (ENSAOCG00000003961) ##22 fev (ENSAOCG00000003967) cryba2b (ENSAOCG00000003976) umps (ENSAOCG00000003992) fn1a (ENSAOCG00000004018) Orange clownfish MODERN SPECIES 3 gtf2e1 (ENSAPEG00000011172) ENSAPEG00000011153 stxbp5l (ENSAPEG00000011046) poglut2 (ENSAPEG00000010995) ENSAPEG00000010982 nepro (ENSAPEG00000010942) RALB (ENSAPEG00000010927) LRP1B (ENSAPEG00000010605) BZW1 (ENSAPEG00000010528) MYO1B (ENSAPEG00000010418) ENSAPEG00000010352 ENSAPEG00000010098 ENSAPEG00000010056 WNT6 (ENSAPEG00000010032) wnt10a (ENSAPEG00000010000) cdk5r2b (ENSAPEG00000009975) ##22 fev (ENSAPEG00000009962) cryba2b (ENSAPEG00000009942) umps (ENSAPEG00000009890) ENSAPEG00000009869 fn1a (ENSAPEG00000009679) ENSAPEG00000009657 ENSAPEG00000009587 ENSAPEG00000009565 ENSAPEG00000009513 nrp2b (ENSAPEG00000009440) epb41l5 (ENSAPEG00000009152) epb41l5 (ENSAPEG00000009079) ptpn4a (ENSAPEG00000008973) tmem177 (ENSAPEG00000008953) ENSAPEG00000008948 Spiny chromis MODERN SPECIES 1867 cdk5r2b (ENSAPOG00000015841) ##22 fev (ENSAPOG00000000436) cryba2b (ENSAPOG00000015873) umps (ENSAPOG00000015926) Bicolor damselfish MODERN SPECIES 1124 ENSSPAG00000023254 ENSSPAG00000023242 WNT6 (ENSSPAG00000023236) wnt10a (ENSSPAG00000023233) cdk5r2b (ENSSPAG00000023230) ##22 fev (ENSSPAG00000023225) cryba2b (ENSSPAG00000023219) umps (ENSSPAG00000023206) fn1a (ENSSPAG00000022384) ENSSPAG00000022178 Cichlidae ANCESTRAL SPECIES 14 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a Haplochromini ANCESTRAL SPECIES 19 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a Burton s mouthbrooder MODERN SPECIES 344 ENSHBUG00000019494 rabl3 (ENSHBUG00000019478) gtf2e1 (ENSHBUG00000019436) stxbp5l (ENSHBUG00000019406) poglut2 (ENSHBUG00000019018) ENSHBUG00000018993 nepro (ENSHBUG00000018983) RALB (ENSHBUG00000018969) LRP1B (ENSHBUG00000018946) BZW1 (ENSHBUG00000018698) MYO1B (ENSHBUG00000018661) ENSHBUG00000018579 ENSHBUG00000001073 WNT6 (ENSHBUG00000018487) wnt10a (ENSHBUG00000018452) cdk5r2b (ENSHBUG00000018436) ##22 fev (ENSHBUG00000018421) cryba2b (ENSHBUG00000018405) umps (ENSHBUG00000018390) fn1a (ENSHBUG00000018377) ENSHBUG00000018248 ENSHBUG00000018232 nrp2b (ENSHBUG00000018197) epb41l5 (ENSHBUG00000018101) ptpn4a (ENSHBUG00000018046) tmem177 (ENSHBUG00000000974) MRAS (ENSHBUG00000017973) pth2ra (ENSHBUG00000017946) tmem163a (ENSHBUG00000017912) acmsd (ENSHBUG00000017896) ccnt2a (ENSHBUG00000017850) Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a P. nyererei MODERN SPECIES 430 stxbp5l (ENSPNYG00000006590) poglut2 (ENSPNYG00000006553) ENSPNYG00000006547 ENSPNYG00000006541 RALB (ENSPNYG00000006522) ENSPNYG00000006504 ENSPNYG00000006498 LRP1B (ENSPNYG00000006319) BZW1 (ENSPNYG00000006245) MYO1B (ENSPNYG00000006160) mnx2a (ENSPNYG00000006079) ENSPNYG00000006042 ENSPNYG00000006000 WNT6 (ENSPNYG00000005978) wnt10a (ENSPNYG00000005950) cdk5r2b (ENSPNYG00000005938) ##22 fev (ENSPNYG00000005923) cryba2b (ENSPNYG00000005892) umps (ENSPNYG00000005838) fn1a (ENSPNYG00000005692) ENSPNYG00000005662 ENSPNYG00000005648 nrp2b (ENSPNYG00000005599) epb41l5 (ENSPNYG00000005555) ptpn4a (ENSPNYG00000005464) tmem177 (ENSPNYG00000005436) MRAS (ENSPNYG00000005416) Haplochromini_B ANCESTRAL SPECIES 39 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00390000001170.a.a ENSGT00490000043417 Zebra mbuna MODERN SPECIES 1098 ENSMZEG00005002667 rabl3 (ENSMZEG00005002607) gtf2e1 (ENSMZEG00005002587) stxbp5l (ENSMZEG00005002546) poglut2 (ENSMZEG00005002521) ENSMZEG00005002510 nepro (ENSMZEG00005002507) RALB (ENSMZEG00005002487) LRP1B (ENSMZEG00005002258) BZW1 (ENSMZEG00005002198) MYO1B (ENSMZEG00005002144) ENSMZEG00005002024 ENSMZEG00005002006 WNT6 (ENSMZEG00005001991) wnt10a (ENSMZEG00005001979) cdk5r2b (ENSMZEG00005001970) ##22 fev (ENSMZEG00005001960) cryba2b (ENSMZEG00005001946) umps (ENSMZEG00005001923) fn1a (ENSMZEG00005001851) ENSMZEG00005001789 nrp2b (ENSMZEG00005001691) epb41l5 (ENSMZEG00005001677) ptpn4a (ENSMZEG00005001562) tmem177 (ENSMZEG00005001546) MRAS (ENSMZEG00005001534) pth2ra (ENSMZEG00005001481) ENSMZEG00005001468 tmem163a (ENSMZEG00005001445) acmsd (ENSMZEG00005001427) ccnt2a (ENSMZEG00005001394) Eastern happy MODERN SPECIES 7 stxbp5l (ENSACLG00000009045) poglut2 (ENSACLG00000009023) ENSACLG00000009019 nepro (ENSACLG00000009010) RALB (ENSACLG00000009005) ENSACLG00000008994 LRP1B (ENSACLG00000008873) BZW1 (ENSACLG00000008855) ENSACLG00000008844 ENSACLG00000008838 mnx2a (ENSACLG00000008742) ENSACLG00000008622 ENSACLG00000008619 WNT6 (ENSACLG00000008605) wnt10a (ENSACLG00000008596) cdk5r2b (ENSACLG00000008590) ##22 fev (ENSACLG00000008580) cryba2b (ENSACLG00000008557) umps (ENSACLG00000008544) fn1a (ENSACLG00000008496) ENSACLG00000008492 ENSACLG00000007943 nrp2b (ENSACLG00000007905) epb41l5 (ENSACLG00000007894) ptpn4a (ENSACLG00000007832) tmem177 (ENSACLG00000007814) MRAS (ENSACLG00000007804) pth2ra (ENSACLG00000007767) ENSACLG00000007728 tmem163a (ENSACLG00000007268) acmsd (ENSACLG00000007229) Lyretail cichlid MODERN SPECIES 319 ENSNBRG00000012444 gtf2e1 (ENSNBRG00000012453) stxbp5l (ENSNBRG00000012464) poglut2 (ENSNBRG00000012518) ENSNBRG00000012545 nepro (ENSNBRG00000012587) RALB (ENSNBRG00000012615) LRP1B (ENSNBRG00000012652) BZW1 (ENSNBRG00000012864) MYO1B (ENSNBRG00000012903) mnx2a (ENSNBRG00000012980) ENSNBRG00000013009 ENSNBRG00000013024 WNT6 (ENSNBRG00000013039) wnt10a (ENSNBRG00000013057) cdk5r2b (ENSNBRG00000013077) ##22 fev (ENSNBRG00000013088) cryba2b (ENSNBRG00000013114) umps (ENSNBRG00000013156) fn1a (ENSNBRG00000013355) ENSNBRG00000014151 ENSNBRG00000014184 nrp2b (ENSNBRG00000014391) epb41l5 (ENSNBRG00000014509) ptpn4a (ENSNBRG00000014547) tmem177 (ENSNBRG00000014602) MRAS (ENSNBRG00000014613) pth2ra (ENSNBRG00000014658) tmem163a (ENSNBRG00000014758) acmsd (ENSNBRG00000014777) ccnt2a (ENSNBRG00000014815) Nile tilapia MODERN SPECIES 7 gtf2e1 (ENSONIG00000004288) stxbp5l (ENSONIG00000004290) poglut2 (ENSONIG00000004306) ENSONIG00000004309 nepro (ENSONIG00000004312) RALB (ENSONIG00000004313) ENSONIG00000042591 LRP1B (ENSONIG00000004316) BZW1 (ENSONIG00000039517) MYO1B (ENSONIG00000004336) mnx2a (ENSONIG00000036548) ENSONIG00000035161 ENSONIG00000004359 WNT6 (ENSONIG00000004360) wnt10a (ENSONIG00000032469) cdk5r2b (ENSONIG00000021341) ##22 fev (ENSONIG00000037422) cryba2b (ENSONIG00000004364) umps (ENSONIG00000004366) fn1a (ENSONIG00000004372) ENSONIG00000026458 ENSONIG00000004391 ENSONIG00000034750 nrp2b (ENSONIG00000004396) ENSONIG00000038574 epb41l5 (ENSONIG00000004414) ptpn4a (ENSONIG00000004426) tmem177 (ENSONIG00000004446) MRAS (ENSONIG00000004448) pth2ra (ENSONIG00000004451) ENSONIG00000028529 Midas cichlid MODERN SPECIES 360 rabl3 (ENSACIG00000014343) gtf2e1 (ENSACIG00000014316) stxbp5l (ENSACIG00000014281) poglut2 (ENSACIG00000014207) ENSACIG00000014174 nepro (ENSACIG00000014142) RALB (ENSACIG00000014130) ENSACIG00000014102 LRP1B (ENSACIG00000013881) BZW1 (ENSACIG00000013845) MYO1B (ENSACIG00000013795) ENSACIG00000013756 ENSACIG00000013607 WNT6 (ENSACIG00000013585) wnt10a (ENSACIG00000013551) cdk5r2b (ENSACIG00000013535) ##22 fev (ENSACIG00000013530) cryba2b (ENSACIG00000013518) umps (ENSACIG00000013495) ENSACIG00000013487 Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Eupercaria ANCESTRAL SPECIES 25 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Eupecaria_A ANCESTRAL SPECIES 24 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Ballan wrasse MODERN SPECIES 115 ENSLBEG00000020318 rabl3 (ENSLBEG00000020595) gtf2e1 (ENSLBEG00000020632) stxbp5l (ENSLBEG00000020768) poglut2 (ENSLBEG00000021084) nepro (ENSLBEG00000021136) RALB (ENSLBEG00000021167) LRP1B (ENSLBEG00000021252) BZW1 (ENSLBEG00000021455) MYO1B (ENSLBEG00000021539) ENSLBEG00000021699 ENSLBEG00000021710 ENSLBEG00000021771 WNT6 (ENSLBEG00000021893) wnt10a (ENSLBEG00000021913) cdk5r2b (ENSLBEG00000021930) ##22 fev (ENSLBEG00000021947) cryba2b (ENSLBEG00000021959) umps (ENSLBEG00000022046) fn1a (ENSLBEG00000022253) ENSLBEG00000022373 ENSLBEG00000022395 ENSLBEG00000022413 ENSLBEG00000022424 ENSLBEG00000022443 ENSLBEG00000022475 Eupecaria_B ANCESTRAL SPECIES 24 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Perciformes ANCESTRAL SPECIES 23 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Cottioidei ANCESTRAL SPECIES 14 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000234640.a.b.a.a.a.a.a.b.a.a.a Stickleback MODERN SPECIES 16 ugt1b1 (ENSGACG00000007337) gzm3.3 (ENSGACG00000007370) rabl3 (ENSGACG00000007387) gtf2e1 (ENSGACG00000007408) stxbp5l (ENSGACG00000007424) poglut2 (ENSGACG00000007436) ENSGACG00000007472 ENSGACG00000007473 RALB (ENSGACG00000007498) LRP1B (ENSGACG00000007503) BZW1 (ENSGACG00000007556) MYO1B (ENSGACG00000007578) ENSGACG00000007589 WNT6 (ENSGACG00000007593) wnt10a (ENSGACG00000007605) cdk5r2b (ENSGACG00000007612) ##22 fev (ENSGACG00000007619) cryba2b (ENSGACG00000007624) umps (ENSGACG00000007660) fn1a (ENSGACG00000007714) ENSGACG00000007737 ENSGACG00000007739 ENSGACG00000007753 nrp2b (ENSGACG00000007758) epb41l5 (ENSGACG00000007774) ptpn4a (ENSGACG00000007798) tmem177 (ENSGACG00000007813) MRAS (ENSGACG00000007818) pth2ra (ENSGACG00000007845) ENSGACG00000007859 ENSGACG00000007864 Lumpfish MODERN SPECIES 13 rabl3 (ENSCLMG00005016317) gtf2e1 (ENSCLMG00005016318) stxbp5l (ENSCLMG00005016335) ENSCLMG00005017386 poglut2 (ENSCLMG00005017391) ENSCLMG00005017397 nepro (ENSCLMG00005017400) RALB (ENSCLMG00005017402) LRP1B (ENSCLMG00005017411) BZW1 (ENSCLMG00005017429) MYO1B (ENSCLMG00005017521) ENSCLMG00005017740 ENSCLMG00005017750 WNT6 (ENSCLMG00005017757) wnt10a (ENSCLMG00005017759) cdk5r2b (ENSCLMG00005017762) ##22 fev (ENSCLMG00005017765) cryba2b (ENSCLMG00005017766) umps (ENSCLMG00005017772) fn1a (ENSCLMG00005018201) ENSCLMG00005020690 ENSCLMG00005020714 ENSCLMG00005020715 ENSCLMG00005020718 NRP2 (ENSCLMG00005020735) epb41l5 (ENSCLMG00005020797) ptpn4a (ENSCLMG00005020800) tmem177 (ENSCLMG00005020802) ENSCLMG00005020803 MRAS (ENSCLMG00005020804) pth2ra (ENSCLMG00005020806) Perciformes_a ANCESTRAL SPECIES 23 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b Pike perch MODERN SPECIES 57 gzm3 (ENSSLUG00000002340) rabl3 (ENSSLUG00000002346) gtf2e1 (ENSSLUG00000002352) stxbp5l (ENSSLUG00000002386) poglut2 (ENSSLUG00000002562) ENSSLUG00000002666 nepro (ENSSLUG00000002669) RALB (ENSSLUG00000002676) LRP1B (ENSSLUG00000002688) BZW1 (ENSSLUG00000002722) MYO1B (ENSSLUG00000002916) ENSSLUG00000006332 ENSSLUG00000006355 WNT6 (ENSSLUG00000006365) wnt10a (ENSSLUG00000006369) cdk5r2b (ENSSLUG00000006375) ##22 fev (ENSSLUG00000006380) cryba2b (ENSSLUG00000006395) umps (ENSSLUG00000006433) fn1a (ENSSLUG00000006503) ENSSLUG00000007495 ENSSLUG00000007517 nrp2b (ENSSLUG00000007719) epb41l5 (ENSSLUG00000010910) ptpn4a (ENSSLUG00000010922) tmem177 (ENSSLUG00000010936) ENSSLUG00000010938 ENSSLUG00000010940 MRAS (ENSSLUG00000010942) pth2ra (ENSSLUG00000010943) ENSSLUG00000010948 Channel bull blenny MODERN SPECIES 13 ENSCGOG00000002786 nepro (ENSCGOG00000002733) RALB (ENSCGOG00000002607) ENSCGOG00000002600 ENSCGOG00000002587 ENSCGOG00000020603 ENSCGOG00000020597 BZW1 (ENSCGOG00000020174) MYO1B (ENSCGOG00000017546) ENSCGOG00000017473 ENSCGOG00000017471 ENSCGOG00000017464 ENSCGOG00000017461 WNT6 (ENSCGOG00000017458) wnt10a (ENSCGOG00000017451) cdk5r2b (ENSCGOG00000017449) ##22 fev (ENSCGOG00000017448) cryba2b (ENSCGOG00000017440) umps (ENSCGOG00000017423) fn1a (ENSCGOG00000016623) ENSCGOG00000016596 CPO (ENSCGOG00000016592) ENSCGOG00000016587 ENSCGOG00000016585 nrp2b (ENSCGOG00000015388) epb41l5 (ENSCGOG00000014584) ptpn4a (ENSCGOG00000014011) tmem177 (ENSCGOG00000014003) MRAS (ENSCGOG00000014001) pth2ra (ENSCGOG00000013842) ENSCGOG00000013809 Eupecaria_C ANCESTRAL SPECIES 24 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Gilthead seabream MODERN SPECIES 23 rabl3 (ENSSAUG00010021878) gtf2e1 (ENSSAUG00010021891) stxbp5l (ENSSAUG00010021901) poglut2 (ENSSAUG00010022250) ENSSAUG00010022329 nepro (ENSSAUG00010022331) RALB (ENSSAUG00010022333) LRP1B (ENSSAUG00010004236) BZW1 (ENSSAUG00010004726) MYO1B (ENSSAUG00010004914) ENSSAUG00010009001 ENSSAUG00010009005 ENSSAUG00010009018 WNT6 (ENSSAUG00010009019) wnt10a (ENSSAUG00010009021) cdk5r2b (ENSSAUG00010009022) ##22 fev (ENSSAUG00010009023) cryba2b (ENSSAUG00010009024) umps (ENSSAUG00010009026) fn1a (ENSSAUG00010009061) ENSSAUG00010010189 ENSSAUG00010010190 ENSSAUG00010010192 nrp2b (ENSSAUG00010010220) epb41l5 (ENSSAUG00010012341) ptpn4a (ENSSAUG00010012414) tmem177 (ENSSAUG00010012606) ENSSAUG00010012609 MRAS (ENSSAUG00010012612) pth2ra (ENSSAUG00010012615) ENSSAUG00010012650 Eupercaria_incertae_sedis ANCESTRAL SPECIES 24 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b European seabass MODERN SPECIES 5 ENSDLAG00005021416 ENSDLAG00005021371 RABL3 (ENSDLAG00005021351) gtf2e1 (ENSDLAG00005021341) stxbp5l (ENSDLAG00005020398) poglut2 (ENSDLAG00005020181) ENSDLAG00005026573 ENSDLAG00005020142 ENSDLAG00005018867 ENSDLAG00005018786 ENSDLAG00005016648 ENSDLAG00005033314 ENSDLAG00005016565 WNT6 (ENSDLAG00005028524) wnt10a (ENSDLAG00005016532) cdk5r2b (ENSDLAG00005016521) ##22 fev (ENSDLAG00005029495) cryba2b (ENSDLAG00005033399) umps (ENSDLAG00005016251) ENSDLAG00005014378 ENSDLAG00005034629 ENSDLAG00005014284 ENSDLAG00005014196 ENSDLAG00005035118 epb41l5 (ENSDLAG00005014094) ENSDLAG00005013780 ENSDLAG00005030809 ENSDLAG00005013762 ENSDLAG00005013612 ENSDLAG00005013553 ENSDLAG00005013344 Large yellow croaker MODERN SPECIES 490 rabl3 (ENSLCRG00005022210) gtf2e1 (ENSLCRG00005022209) ENSLCRG00005022207 stxbp5l (ENSLCRG00005020691) poglut2 (ENSLCRG00005020630) ENSLCRG00005020629 nepro (ENSLCRG00005020627) RALB (ENSLCRG00005020626) LRP1B (ENSLCRG00005020331) BZW1 (ENSLCRG00005020277) MYO1B (ENSLCRG00005020255) ENSLCRG00005020244 ENSLCRG00005020241 WNT6 (ENSLCRG00005020239) wnt10a (ENSLCRG00005020237) cdk5r2b (ENSLCRG00005020236) ##22 fev (ENSLCRG00005020233) cryba2b (ENSLCRG00005020230) umps (ENSLCRG00005020227) fn1a (ENSLCRG00005009972) ENSLCRG00005009866 ENSLCRG00005009860 ENSLCRG00005009846 nrp2b (ENSLCRG00005009196) epb41l5 (ENSLCRG00005009116) ptpn4a (ENSLCRG00005009097) tmem177 (ENSLCRG00005009093) ENSLCRG00005009091 MRAS (ENSLCRG00005009090) pth2ra (ENSLCRG00005009081) ENSLCRG00005009076 Tetraodontidae ANCESTRAL SPECIES ENSGT00910000144271.C ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00390000007644 ENSGT00940000163874 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 Tetraodon MODERN SPECIES 13 ENSTNIG00000004093 gtf2e1 (ENSTNIG00000004094) stxbp5l (ENSTNIG00000007003) poglut2 (ENSTNIG00000007004) ENSTNIG00000007005 ENSTNIG00000000340 RALB (ENSTNIG00000014250) LRP1B (ENSTNIG00000017043) BZW1 (ENSTNIG00000017044) MYO1B (ENSTNIG00000017045) ENSTNIG00000017046 ENSTNIG00000001742 ENSTNIG00000017047 WNT6 (ENSTNIG00000017048) wnt10a (ENSTNIG00000017049) cdk5r2b (ENSTNIG00000001286) ##22 fev (ENSTNIG00000017050) cryba2b (ENSTNIG00000017051) umps (ENSTNIG00000017052) fn1a (ENSTNIG00000017053) ENSTNIG00000001642 ENSTNIG00000017054 nrp2b (ENSTNIG00000007570) epb41l5 (ENSTNIG00000007569) ptpn4a (ENSTNIG00000007568) tmem177 (ENSTNIG00000007567) MRAS (ENSTNIG00000007566) pth2ra (ENSTNIG00000007565) acmsd (ENSTNIG00000007564) ccnt2a (ENSTNIG00000007563) ENSTNIG00000007562 Fugu MODERN SPECIES rabl3 (ENSTRUG00000001275) ENSTRUG00000022551 rabl3 (ENSTRUG00000007846) gtf2e1 (ENSTRUG00000007723) stxbp5l (ENSTRUG00000007289) poglut2 (ENSTRUG00000007099) ENSTRUG00000006976 nepro (ENSTRUG00000020076) RALB (ENSTRUG00000006857) BZW1 (ENSTRUG00000005576) MYO1B (ENSTRUG00000004277) ENSTRUG00000004181 ENSTRUG00000021136 WNT6 (ENSTRUG00000022464) wnt10a (ENSTRUG00000003255) ENSTRUG00000031853 ##22 fev (ENSTRUG00000003136) cryba2b (ENSTRUG00000002508) umps (ENSTRUG00000002053) fn1a (ENSTRUG00000001374) ENSTRUG00000001358 ENSTRUG00000002389 nrp2b (ENSTRUG00000003723) epb41l5 (ENSTRUG00000005009) ptpn4a (ENSTRUG00000005419) tmem177 (ENSTRUG00000023228) mras (ENSTRUG00000032019) pth2 (ENSTRUG00000006000) ENSTRUG00000008190 tmem163a (ENSTRUG00000008099) acmsd (ENSTRUG00000007957) Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Anabantaria ANCESTRAL SPECIES 14 ENSGT00910000144271.C ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b Zig-zag eel MODERN SPECIES 13 ENSMAMG00000015177 RABL3 (ENSMAMG00000025818) gtf2e1 (ENSMAMG00000015151) stxbp5l (ENSMAMG00000015101) poglut2 (ENSMAMG00000015058) ENSMAMG00000015018 nepro (ENSMAMG00000028541) ENSMAMG00000015005 ENSMAMG00000014728 ENSMAMG00000014694 ENSMAMG00000014621 ENSMAMG00000014613 ENSMAMG00000014546 WNT6 (ENSMAMG00000014507) wnt10a (ENSMAMG00000014474) cdk5r2b (ENSMAMG00000014465) ##22 fev (ENSMAMG00000014450) cryba2b (ENSMAMG00000014432) umps (ENSMAMG00000014385) ENSMAMG00000014337 ENSMAMG00000014293 ENSMAMG00000014257 ENSMAMG00000014199 ENSMAMG00000014135 ENSMAMG00000013943 ENSMAMG00000026386 epb41l5 (ENSMAMG00000013901) ptpn4a (ENSMAMG00000013766) tmem177 (ENSMAMG00000013743) MRAS (ENSMAMG00000024499) ENSMAMG00000013608 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00910000144271.C ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b Siamese fighting fish MODERN SPECIES 11 ENSBSLG00000019859 ENSBSLG00000019872 rabl3 (ENSBSLG00000019888) gtf2e1 (ENSBSLG00000020012) stxbp5l (ENSBSLG00000020114) poglut2 (ENSBSLG00000021104) ENSBSLG00000021248 nepro (ENSBSLG00000021305) RALB (ENSBSLG00000021323) BZW1 (ENSBSLG00000022377) MYO1B (ENSBSLG00000022571) ENSBSLG00000023171 ENSBSLG00000023185 WNT6 (ENSBSLG00000023206) wnt10a (ENSBSLG00000023221) cdk5r2b (ENSBSLG00000023223) ##22 fev (ENSBSLG00000023227) cryba2b (ENSBSLG00000023236) umps (ENSBSLG00000023253) fn1a (ENSBSLG00000023376) ENSBSLG00000023457 ENSBSLG00000023482 nrp2b (ENSBSLG00000023518) epb41l5 (ENSBSLG00000023669) ptpn4a (ENSBSLG00000023717) tmem177 (ENSBSLG00000023772) MRAS (ENSBSLG00000023775) pth2ra (ENSBSLG00000023777) ENSBSLG00000023785 ENSBSLG00000023793 tmem163a (ENSBSLG00000023801) Climbing perch MODERN SPECIES 12 ENSATEG00000003485 RABL3 (ENSATEG00000003503) gtf2e1 (ENSATEG00000003558) stxbp5l (ENSATEG00000003596) poglut2 (ENSATEG00000003703) ENSATEG00000003760 nepro (ENSATEG00000003766) ENSATEG00000028532 ENSATEG00000003798 ENSATEG00000004179 ENSATEG00000004304 ENSATEG00000004418 ENSATEG00000004484 WNT6 (ENSATEG00000004502) wnt10a (ENSATEG00000004511) cdk5r2b (ENSATEG00000004537) ##22 fev (ENSATEG00000004567) cryba2b (ENSATEG00000004577) umps (ENSATEG00000004607) ENSATEG00000004631 ENSATEG00000004817 ENSATEG00000004863 ENSATEG00000004886 ENSATEG00000004912 ENSATEG00000027461 ENSATEG00000004918 ENSATEG00000004925 IL10RB (ENSATEG00000025353) ENSATEG00000004984 ENSATEG00000028377 TMEM50B (ENSATEG00000005026) Carangaria ANCESTRAL SPECIES 12 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00910000144271.C ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318 ENSGT01000000216059 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b Tongue sole MODERN SPECIES 7 asb1 (ENSCSEG00000019185) fev (ENSCSEG00000019191) cryba2b (ENSCSEG00000019194) umps (ENSCSEG00000019200) fn1a (ENSCSEG00000019211) ENSCSEG00000019628 ENSCSEG00000019637 nrp2b (ENSCSEG00000019639) LRP1B (ENSCSEG00000019647) BZW1 (ENSCSEG00000019691) MYO1B (ENSCSEG00000019699) ENSCSEG00000019713 ENSCSEG00000019718 WNT6 (ENSCSEG00000019725) wnt10a (ENSCSEG00000019730) cdk5r2b (ENSCSEG00000019737) ##22 Carangaria_A ANCESTRAL SPECIES 11 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318.d ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 Seriola ANCESTRAL SPECIES 34 ENSGT00390000007467 ENSGT00390000016696 ENSGT00950000182906.b.b ENSGT00940000158318.d ENSGT00940000163874 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a ENSGT00950000183214.a.b.a.b.f.a ENSGT00940000155270.i.a ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a Greater amberjack MODERN SPECIES 21 rabl3 (ENSSDUG00000012078) gtf2e1 (ENSSDUG00000012042) stxbp5l (ENSSDUG00000011992) poglut2 (ENSSDUG00000011959) ENSSDUG00000011945 nepro (ENSSDUG00000011923) RALB (ENSSDUG00000011914) LRP1B (ENSSDUG00000011721) BZW1 (ENSSDUG00000011658) MYO1B (ENSSDUG00000011442) ENSSDUG00000011392 ENSSDUG00000011302 ENSSDUG00000011277 WNT6 (ENSSDUG00000011257) wnt10a (ENSSDUG00000011248) cdk5r2b (ENSSDUG00000011231) ##22 fev (ENSSDUG00000011221) cryba2b (ENSSDUG00000011208) umps (ENSSDUG00000011183) umps (ENSSDUG00000011174) umps (ENSSDUG00000011159) fn1a (ENSSDUG00000011068) ENSSDUG00000010992 ENSSDUG00000010939 nrp2b (ENSSDUG00000010828) epb41l5 (ENSSDUG00000010789) ptpn4a (ENSSDUG00000010750) tmem177 (ENSSDUG00000010744) ENSSDUG00000010701 MRAS (ENSSDUG00000010675) pth2ra (ENSSDUG00000010644) Yellowtail amberjack MODERN SPECIES 3086 rabl3 (ENSSLDG00000021899) gtf2e1 (ENSSLDG00000021923) stxbp5l (ENSSLDG00000021939) poglut2 (ENSSLDG00000021968) ENSSLDG00000021991 nepro (ENSSLDG00000022002) RALB (ENSSLDG00000022015) LRP1B (ENSSLDG00000022066) BZW1 (ENSSLDG00000022189) MYO1B (ENSSLDG00000022217) ENSSLDG00000022259 ENSSLDG00000022285 ENSSLDG00000022331 WNT6 (ENSSLDG00000022349) wnt10a (ENSSLDG00000022364) cdk5r2b (ENSSLDG00000022392) ##22 fev (ENSSLDG00000022400) cryba2b (ENSSLDG00000022419) umps (ENSSLDG00000022454) umps (ENSSLDG00000022559) fn1a (ENSSLDG00000022581) ENSSLDG00000022638 ENSSLDG00000022653 ENSSLDG00000022732 ENSSLDG00000022740 ENSSLDG00000022746 nrp2b (ENSSLDG00000022769) Barramundi perch MODERN SPECIES 244 ENSLCAG00010027716 LRP1B (ENSLCAG00010027696) BZW1 (ENSLCAG00010027657) MYO1B (ENSLCAG00010027636) mnx2a (ENSLCAG00010027627) ENSLCAG00010027624 ENSLCAG00010027622 ENSLCAG00010027618 ENSLCAG00010027616 WNT6 (ENSLCAG00010027615) wnt10a (ENSLCAG00010027614) cdk5r2b (ENSLCAG00010027613) ##22 fev (ENSLCAG00010027612) cryba2b (ENSLCAG00010027610) umps (ENSLCAG00010027608) fn1a (ENSLCAG00010026990) ENSLCAG00010026823 ENSLCAG00010026820 ENSLCAG00010026813 Tiger tail seahorse MODERN SPECIES 49 ENSHCOG00000000505 MYO1B (ENSHCOG00000019103) ENSHCOG00000018791 ENSHCOG00000018780 WNT6 (ENSHCOG00000018698) wnt10a (ENSHCOG00000018681) cdk5r2b (ENSHCOG00000018638) ##22 fev (ENSHCOG00000018625) cryba2b (ENSHCOG00000018604) umps (ENSHCOG00000018602) fn1a (ENSHCOG00000018586) hao2 (ENSHCOG00000018487) ENSHCOG00000018478 hsd3b2 (ENSHCOG00000018444) pla1a (ENSHCOG00000018436) popdc2 (ENSHCOG00000018409) cox17 (ENSHCOG00000018401) ENSHCOG00000018398 ska3 (ENSHCOG00000018354) ENSHCOG00000018317 lats2 (ENSHCOG00000018305) xpo4 (ENSHCOG00000018297) Pinecone sodierfish MODERN SPECIES 13 snx4 (ENSMMDG00005023926) ihha (ENSMMDG00005023915) BIN1 (ENSMMDG00005023914) TMEM198 (ENSMMDG00005023908) desma (ENSMMDG00005023872) ptprna (ENSMMDG00005023863) dnajb2 (ENSMMDG00005023858) ENSMMDG00005023848 tuba8l5 (ENSMMDG00005023844) tuba8l2 (ENSMMDG00005023841) ENSMMDG00005023838 ENSMMDG00005023837 ENSMMDG00005023835 WNT6 (ENSMMDG00005023833) wnt10a (ENSMMDG00005023832) ENSMMDG00005023829 ##22 ENSMMDG00005023828 fev (ENSMMDG00005023827) cryba2b (ENSMMDG00005023825) umps (ENSMMDG00005023818) fn1a (ENSMMDG00005016586) ENSMMDG00005016265 ENSMMDG00005016261 ENSMMDG00005016257 ENSMMDG00005016255 nrp2b (ENSMMDG00005016249) epb41l5 (ENSMMDG00005016153) ptpn4a (ENSMMDG00005015701) tmem177 (ENSMMDG00005015667) MRAS (ENSMMDG00005015654) pth2ra (ENSMMDG00005015640) Cod MODERN SPECIES 12 ENSGMOG00000036933 ENSGMOG00000018189 pknox1.1 (ENSGMOG00000018171) ENSGMOG00000032378 ENSGMOG00000034690 wdr4 (ENSGMOG00000018145) PDE9A (ENSGMOG00000018112) slc37a1 (ENSGMOG00000019504) RSPH1 (ENSGMOG00000019274) ENSGMOG00000001953 ENSGMOG00000022561 ENSGMOG00000036274 ENSGMOG00000025637 WNT6 (ENSGMOG00000033106) wnt10a (ENSGMOG00000008295) ENSGMOG00000034858 ##22 fev (ENSGMOG00000023733) cryba2b (ENSGMOG00000026086) umps (ENSGMOG00000008301) ENSGMOG00000008304 ENSGMOG00000023608 man1a2 (ENSGMOG00000004751) ENSGMOG00000004776 ENSGMOG00000004802 ENSGMOG00000024859 mnx2a (ENSGMOG00000028935) ENSGMOG00000036804 ENSGMOG00000023285 ENSGMOG00000035388 ENSGMOG00000036901 tuba8l5 (ENSGMOG00000031423) Protacanthopterygii ANCESTRAL SPECIES 18 ENSGT00390000010463.a.b.c.b ENSGT01050000244905.A.b ENSGT01050000244905.D ENSGT01050000244848.C.a ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155248.wb ENSGT00390000012731.a.b.j ENSGT00940000157879 ENSGT00940000155515.a.b.b ENSGT00930000150980.a ENSGT00390000010523.c.b ENSGT00940000158904 ENSGT01080000257365.b.a.a.b.a ENSGT00950000183038.a.b.b.b.q ENSGT00390000001718.a ENSGT00940000159241 ENSGT00940000180702 Salmoninae ANCESTRAL SPECIES 6 ENSGT00390000015143.l ENSGT00390000006303.i ENSGT00390000010463.a.b.c.b.g ENSGT01050000244905.A.b.h ENSGT01050000244905.D.f ENSGT01050000244848.C.a.e ENSGT01030000234618.F.d ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018.g ENSGT00940000154610.e.a ENSGT00940000159052.i.a ENSGT01050000244857.B.b.f ENSGT00940000159281.a ENSGT00940000160299.g ENSGT00390000008812.a.a ##22 ENSGT00940000161562.b ENSGT00940000160306.l ENSGT00390000001856.h ENSGT01100000265943 ENSGT00940000155248.wb.a ENSGT00940000157879.`b ENSGT00940000155515.a.b.b.p ENSGT00930000150980.a.h ENSGT00390000010523.c.b.f ENSGT00940000158904.cb ENSGT01080000257365.b.a.a.b.a.q ENSGT00950000183038.a.b.b.b.q.a ENSGT00940000161562.a ENSGT00940000160306.k ENSGT00390000001856.g Salmoninae_a ANCESTRAL SPECIES ENSGT00390000006303.i ENSGT00390000010463.a.b.c.b.g ENSGT01050000244905.A.b.h ENSGT01050000244905.D.f ENSGT01050000244848.C.a.e ENSGT01030000234618.F.d ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018.g ENSGT01000000218985.A ENSGT00940000154610.e.a ENSGT00940000159052.i.a ENSGT01050000244857.B.b.f ENSGT00940000159281.a ENSGT00940000160299.g ENSGT00390000008812.a.a ##22 ENSGT00940000161562.b ENSGT00940000160306.l ENSGT00390000001856.h ENSGT01100000265943 ENSGT00940000155248.wb.a ENSGT00940000157879.`b ENSGT00940000155515.a.b.b.p ENSGT00930000150980.a.h ENSGT00390000010523.c.b.f ENSGT00940000158904.cb ENSGT01080000257365.b.a.a.b.a.q ENSGT00950000183038.a.b.b.b.q.a ENSGT00390000001718.a ENSGT00940000159241.v ENSGT00530000063734.a.g Oncorhynchus ANCESTRAL SPECIES 3 ENSGT00390000006303.i ENSGT00390000010463.a.b.c.b.g ENSGT01050000244905.A.b.h ENSGT01050000244905.D.f ENSGT01050000244848.C.a.e ENSGT01030000234618.F.d ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018.g ENSGT01000000218985.A ENSGT00940000154610.e.a ENSGT00940000159052.i.a ENSGT01050000244857.B.b.f ENSGT00940000159281.a ENSGT00940000160299.g ENSGT00390000008812.a.a ##22 ENSGT00940000161562.b ENSGT00940000160306.l ENSGT00390000001856.h ENSGT00940000155248.wb.a ENSGT00940000157879.`b ENSGT00940000155515.a.b.b.p ENSGT00930000150980.a.h ENSGT00390000010523.c.b.f ENSGT00940000158904.cb ENSGT01080000257365.b.a.a.b.a.q ENSGT00950000183038.a.b.b.b.q.a ENSGT00390000001718.a ENSGT00940000159241.v ENSGT00530000063734.a.g ENSGT00940000158842.i Oncorhynchus_a ANCESTRAL SPECIES 8 ENSGT00390000006303.i ENSGT00390000010463.a.b.c.b.g ENSGT01050000244905.A.b.h ENSGT01050000244905.D.f ENSGT01050000244848.C.a.e ENSGT01030000234618.F.d ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018.g ENSGT01000000218985.A ENSGT00940000154610.e.a ENSGT00940000159052.i.a ENSGT01050000244857.B.b.f ENSGT00940000159281.a ENSGT00940000160299.g ENSGT00390000008812.a.a ##22 ENSGT00940000161562.b ENSGT00940000160306.l ENSGT00390000001856.h ENSGT00940000155248.wb.a ENSGT00940000157879.`b ENSGT00940000155515.a.b.b.p ENSGT00930000150980.a.h ENSGT00390000010523.c.b.f ENSGT00940000158904.cb ENSGT01080000257365.b.a.a.b.a.q ENSGT00950000183038.a.b.b.b.q.a ENSGT00390000001718.a ENSGT00940000159241.v ENSGT00530000063734.a.g ENSGT00940000158842.i Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 22 wdr75 (ENSOTSG00005011700) ENSOTSG00005014230 ENSOTSG00005015246 ENSOTSG00005018787 CXCR4 (ENSOTSG00005018836) dars1 (ENSOTSG00005018850) TMBIM1 (ENSOTSG00005020600) pnkd (ENSOTSG00005020601) gmppaa (ENSOTSG00005020602) ENSOTSG00005020636 ENSOTSG00005020637 ASIC4 (ENSOTSG00005020639) CHPF (ENSOTSG00005020640) WNT6 (ENSOTSG00005020641) wnt10a (ENSOTSG00005020642) cdk5r2b (ENSOTSG00005020643) ##22 fev (ENSOTSG00005020644) CRYBA2 (ENSOTSG00005020647) umps (ENSOTSG00005020648) KALRN (ENSOTSG00005020668) MYLK (ENSOTSG00005022374) ENSOTSG00005022389 FMNL2 (ENSOTSG00005022391) prpf40a (ENSOTSG00005022549) RPRM (ENSOTSG00005028090) GALNT13 (ENSOTSG00005028094) KCNJ3 (ENSOTSG00005028247) nr4a2a (ENSOTSG00005028248) GPD2 (ENSOTSG00005028254) GALNT5 (ENSOTSG00005028272) CYTIP (ENSOTSG00005028315) Chinook salmon MODERN SPECIES 60 ENSOTSG00005031133 cdk5r2b (ENSOTSG00005031134) ##22 fev (ENSOTSG00005031135) CRYBA2 (ENSOTSG00005031137) umps (ENSOTSG00005031138) KALRN (ENSOTSG00005031202) MYLK (ENSOTSG00005032170) ENSOTSG00005032249 FMNL2 (ENSOTSG00005032251) prpf40a (ENSOTSG00005032431) RPRM (ENSOTSG00005037264) GALNT13 (ENSOTSG00005037266) KCNJ3 (ENSOTSG00005037720) nr4a2a (ENSOTSG00005037723) GPD2 (ENSOTSG00005037817) GALNT5 (ENSOTSG00005037818) CYTIP (ENSOTSG00005037823) Coho salmon MODERN SPECIES 11 ENSOKIG00005015328 ENSOKIG00005017852 ENSOKIG00005017861 ENSOKIG00005017932 CXCR4 (ENSOKIG00005017980) dars1 (ENSOKIG00005018036) ENSOKIG00005019173 pnkd (ENSOKIG00005019187) gmppaa (ENSOKIG00005019212) ENSOKIG00005019241 ENSOKIG00005019256 ASIC4 (ENSOKIG00005019274) CHPF (ENSOKIG00005019294) WNT6 (ENSOKIG00005019307) wnt10a (ENSOKIG00005019322) cdk5r2b (ENSOKIG00005019332) ##22 fev (ENSOKIG00005019341) CRYBA2 (ENSOKIG00005019353) umps (ENSOKIG00005019377) KALRN (ENSOKIG00005019454) MYLK (ENSOKIG00005020739) FMNL2 (ENSOKIG00005021739) prpf40a (ENSOKIG00005024797) RPRM (ENSOKIG00005026419) GALNT13 (ENSOKIG00005026469) KCNJ3 (ENSOKIG00005000026) nr4a2a (ENSOKIG00005000063) GPD2 (ENSOKIG00005000089) GALNT5 (ENSOKIG00005000111) CYTIP (ENSOKIG00005000134) ACVR1C (ENSOKIG00005000151) Rainbow trout MODERN SPECIES 21 wdr75 (ENSOMYG00000032269) ENSOMYG00000032746 ENSOMYG00000033782 ENSOMYG00000037279 ENSOMYG00000037426 dars1 (ENSOMYG00000037594) ENSOMYG00000038893 ENSOMYG00000038944 gmppaa (ENSOMYG00000039044) ENSOMYG00000039159 ENSOMYG00000039171 ENSOMYG00000039224 CHPF (ENSOMYG00000039462) WNT6 (ENSOMYG00000039475) wnt10a (ENSOMYG00000039491) cdk5r2b (ENSOMYG00000049882) ##22 fev (ENSOMYG00000039514) CRYBA2 (ENSOMYG00000039532) umps (ENSOMYG00000039546) ENSOMYG00000071189 ENSOMYG00000040032 ENSOMYG00000040753 ENSOMYG00000053298 FMNL2 (ENSOMYG00000041024) prpf40a (ENSOMYG00000041712) ENSOMYG00000074072 RPRM (ENSOMYG00000043386) GALNT13 (ENSOMYG00000043487) KCNJ3 (ENSOMYG00000043796) ENSOMYG00000013387 nr4a2a (ENSOMYG00000043806) Salmo ANCESTRAL SPECIES 15 ENSGT00390000006303.i ENSGT00390000010463.a.b.c.b.g ENSGT01050000244905.A.b.h ENSGT01050000244905.D.f ENSGT01050000244848.C.a.e ENSGT01030000234618.F.d ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018.g ENSGT01000000218985.A ENSGT00940000154610.e.a ENSGT00940000159052.i.a ENSGT01050000244857.B.b.f ENSGT00940000159281.a ENSGT00940000160299.g ENSGT00390000008812.a.a ##22 ENSGT00940000161562.b ENSGT00940000160306.l ENSGT00390000001856.h ENSGT01100000265943 ENSGT00940000155248.wb.a ENSGT00940000157879.`b ENSGT00940000155515.a.b.b.p ENSGT00930000150980.a.h ENSGT00390000010523.c.b.e.b ENSGT00390000010523.c.b.f ENSGT00940000158904.cb ENSGT01080000257365.b.a.a.b.a.q ENSGT00950000183038.a.b.b.b.q.a ENSGT00390000001718.a ENSGT00940000159241.v Atlantic salmon MODERN SPECIES 17 ENSSSAG00000054903 ENSSSAG00000119912 ENSSSAG00000085650 ENSSSAG00000062497 cxcr4 (ENSSSAG00000063084) dars1 (ENSSSAG00000063091) tmbi1 (ENSSSAG00000063422) pnkd (ENSSSAG00000063436) gmpaa (ENSSSAG00000063479) ENSSSAG00000063535 ENSSSAG00000063545 ENSSSAG00000057004 CHPF (ENSSSAG00000064412) WNT6 (ENSSSAG00000064418) wnt10a (ENSSSAG00000057031) cdk5r2b (ENSSSAG00000091774) ##22 fev (ENSSSAG00000084432) CRYBA2 (ENSSSAG00000064540) umps (ENSSSAG00000064554) ENSSSAG00000064559 ENSSSAG00000064951 ENSSSAG00000074164 FMNL2 (ENSSSAG00000075300) prpf40a (ENSSSAG00000075700) RPRM (ENSSSAG00000121047) GALNT13 (ENSSSAG00000075780) KCNJ3 (ENSSSAG00000076284) nr4a2a (ENSSSAG00000076290) GPD2 (ENSSSAG00000076318) GALNT5 (ENSSSAG00000076334) CYTIP (ENSSSAG00000076351) River trout MODERN SPECIES 16 wdr75 (ENSSTUG00000033409) ENSSTUG00000033711 stat1b (ENSSTUG00000035665) STAT4 (ENSSTUG00000037348) CXCR4 (ENSSTUG00000037502) dars1 (ENSSTUG00000037518) TMBIM1 (ENSSTUG00000037988) pnkd (ENSSTUG00000038014) gmppaa (ENSSTUG00000038064) ENSSTUG00000038204 ENSSTUG00000038220 ASIC4 (ENSSTUG00000038260) CHPF (ENSSTUG00000038296) WNT6 (ENSSTUG00000038303) wnt10a (ENSSTUG00000038306) cdk5r2b (ENSSTUG00000038321) ##22 fev (ENSSTUG00000038330) CRYBA2 (ENSSTUG00000038354) umps (ENSSTUG00000038368) KALRN (ENSSTUG00000038584) MYLK (ENSSTUG00000046755) FMNL2 (ENSSTUG00000047163) prpf40a (ENSSTUG00000048236) ENSSTUG00000049104 RPRM (ENSSTUG00000049105) GALNT13 (ENSSTUG00000049116) KCNJ3 (ENSSTUG00000049217) nr4a2a (ENSSTUG00000049225) GPD2 (ENSSTUG00000049267) GALNT5 (ENSSTUG00000049289) CYTIP (ENSSTUG00000049297) Huchen DUPLICATION Huchen MODERN SPECIES 7 hoxd12a (ENSHHUG00000033527) ENSHHUG00000033440 evx2 (ENSHHUG00000033438) lnpa (ENSHHUG00000033418) atp5mc3a (ENSHHUG00000033316) ATF2 (ENSHHUG00000033298) ENSHHUG00000033295 ENSHHUG00000033292 ENSHHUG00000033284 CHRNA1 (ENSHHUG00000033273) GPR155 (ENSHHUG00000033265) scrn3 (ENSHHUG00000033250) ENSHHUG00000033179 sp9 (ENSHHUG00000033175) ENSHHUG00000033170 cdk5r2b (ENSHHUG00000033164) ##22 fev (ENSHHUG00000033153) CRYBA2 (ENSHHUG00000033142) umps (ENSHHUG00000033133) ENSHHUG00000033131 KALRN (ENSHHUG00000032444) MYLK (ENSHHUG00000032376) FMNL2 (ENSHHUG00000031728) prpf40a (ENSHHUG00000031683) Huchen MODERN SPECIES 797 ENSHHUG00000040637 CHPF (ENSHHUG00000040627) WNT6 (ENSHHUG00000040617) wnt10a (ENSHHUG00000040548) ENSHHUG00000040540 ##22 fev (ENSHHUG00000040536) CRYBA2 (ENSHHUG00000040498) umps (ENSHHUG00000040484) KALRN (ENSHHUG00000039492) Northern pike MODERN SPECIES 15 GLS (ENSELUG00000015999) stat1b (ENSELUG00000000593) ENSELUG00000015186 cxcr4a (ENSELUG00000000547) dars1 (ENSELUG00000015137) TMBIM1 (ENSELUG00000015082) pnkd (ENSELUG00000015007) gmppaa (ENSELUG00000014925) ENSELUG00000014843 ENSELUG00000014861 ENSELUG00000031144 asic4b (ENSELUG00000014811) CHPF (ENSELUG00000014695) WNT6 (ENSELUG00000014681) wnt10a (ENSELUG00000014669) cdk5r2b (ENSELUG00000014658) ##22 fev (ENSELUG00000014646) cryba2b (ENSELUG00000014619) umps (ENSELUG00000014578) KALRN (ENSELUG00000014491) ENSELUG00000033902 MYLK (ENSELUG00000014006) wdr75 (ENSELUG00000013925) slc40a1 (ENSELUG00000013894) asnsd1 (ENSELUG00000013854) zgc:136439 (ENSELUG00000032874) ankar (ENSELUG00000013809) osgepl1 (ENSELUG00000013776) adat3 (ENSELUG00000013736) ormdl1 (ENSELUG00000013753) pms1 (ENSELUG00000013725) Osteoglossocephalai ANCESTRAL SPECIES 373 ENSGT00950000182882.A.b.b.e ENSGT00390000008812.a.b ##22 ENSGT00390000016940.c.b ENSGT00940000155522.g.a ENSGT00940000167284 ENSGT00950000183165.b.b ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 Clupeocephala ANCESTRAL SPECIES ENSGT00390000008812.a.b ##22 Otomorpha ANCESTRAL SPECIES 755 ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 Clupeiformes ANCESTRAL SPECIES 423 ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 ENSGT00940000160306.n ENSGT00940000155248.vb ENSGT00390000012731.a.b.i ENSGT00390000017916 ENSGT00390000002188 ENSGT00940000160000 ENSGT00390000018525.a.b.e.a Atlantic herring MODERN SPECIES 13 TMEFF2 (ENSCHAG00000008086) vps16 (ENSCHAG00000007833) ENSCHAG00000007683 ADAMTS6 (ENSCHAG00000007657) ENSCHAG00000007636 DIS3 (ENSCHAG00000004041) zgc:172295 (ENSCHAG00000003446) timmdc1 (ENSCHAG00000003399) ENSCHAG00000003378 ENSCHAG00000003362 ENSCHAG00000003326 gmppab (ENSCHAG00000003118) asic4b (ENSCHAG00000002111) CHPF (ENSCHAG00000002060) ENSCHAG00000002031 cdk5r2a (ENSCHAG00000002014) ##22 cryba2a (ENSCHAG00000001996) KALRN (ENSCHAG00000001610) ENSCHAG00000001528 CCDC14 (ENSCHAG00000001479) iqcb1 (ENSCHAG00000001386) TBX19 (ENSCHAG00000001271) ENSCHAG00000001250 ENSCHAG00000001233 trpc7a (ENSCHAG00000000797) ENSCHAG00000000561 ENSCHAG00000023977 atg9a (ENSCHAG00000023956) ENSCHAG00000023451 pttg1ipa (ENSCHAG00000023421) sumo3a (ENSCHAG00000023394) Denticle herring MODERN SPECIES 6 tspan12 (ENSDCDG00000020154) kcnd2 (ENSDCDG00000020160) FLNC (ENSDCDG00000020308) ENSDCDG00000029840 sco2 (ENSDCDG00000029842) ncaph2 (ENSDCDG00000029844) socs2 (ENSDCDG00000029846) cradd (ENSDCDG00000029847) ENSDCDG00000029849 gmppab (ENSDCDG00000029858) ENSDCDG00000029874 asic4b (ENSDCDG00000029886) ENSDCDG00000029933 CHPF (ENSDCDG00000029935) ENSDCDG00000029937 cdk5r2a (ENSDCDG00000029938) ##22 cryba2a (ENSDCDG00000029939) ENSDCDG00000029941 ENSDCDG00000029956 ENSDCDG00000030274 sft2d2b (ENSDCDG00000030283) TBX19 (ENSDCDG00000030291) iqcb1 (ENSDCDG00000030297) si:ch211-223p8.8 (ENSDCDG00000030304) zgc:153981 (ENSDCDG00000030306) znf341 (ENSDCDG00000030307) parp12b (ENSDCDG00000030309) atg9a (ENSDCDG00000030312) ENSDCDG00000030361 ENSDCDG00000030363 ENSDCDG00000030367 Otophysi ANCESTRAL SPECIES 49 ENSGT00940000162403 ENSGT00940000158781.f ENSGT00440000037606.b ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000153514.b.m.b ENSGT00940000157974.h ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00390000010523.c.b.g.b ENSGT00390000009987 ENSGT00940000155515.a.a ENSGT01030000234748.b ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 ENSGT00940000160306.o.a ENSGT00390000016940.c.b.b ENSGT00940000155522.g.b ENSGT00390000003164 ENSGT00940000154095.b.b.a.a ENSGT00940000153979.A ENSGT00940000165279.d ENSGT00950000182837.b.b.c.a ENSGT00940000164275.f ENSGT00940000157360.c ENSGT00390000017581.b.b ENSGT00940000164385.a.a.a.b.d ENSGT00390000011204 ENSGT00950000183001.a.b.b.l ENSGT00530000063596.A.i Characiphysae ANCESTRAL SPECIES 34 ENSGT00940000164225.y ENSGT00940000162403 ENSGT00940000158781.f ENSGT00440000037606.b ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000153514.b.m.b ENSGT00940000157974.h ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00390000010523.c.b.g.b ENSGT00390000009987 ENSGT00940000155515.a.a ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 ENSGT00940000160306.o.a ENSGT00390000016940.c.b.b ENSGT00940000155522.g.b ENSGT00390000003164 ENSGT00940000154095.b.b.a.a ENSGT00940000153979.A ENSGT00940000165279.d ENSGT00950000182837.b.b.c.a ENSGT00940000164275.f ENSGT00940000157360.c ENSGT00390000017581.b.b ENSGT00940000164385.a.a.a.b.d ENSGT00390000011204 ENSGT00950000183001.a.b.b.l ENSGT00530000063596.A.i Channel catfish MODERN SPECIES 3 ndufs1 (ENSIPUG00000013659) ino80db (ENSIPUG00000013638) KCNJ3 (ENSIPUG00000013622) rprmb (ENSIPUG00000013616) ENSIPUG00000013567 arl6ip6 (ENSIPUG00000013535) ENSIPUG00000013416 MYLK (ENSIPUG00000013381) ENSIPUG00000013370 gmppa (ENSIPUG00000013225) ENSIPUG00000013188 ENSIPUG00000013184 asic4 (ENSIPUG00000013144) chpf (ENSIPUG00000013105) ENSIPUG00000013082 CDK5R1 (ENSIPUG00000013077) ##22 tmem198 (ENSIPUG00000013070) des (ENSIPUG00000013039) Dnpep (ENSIPUG00000012983) PTPRN (ENSIPUG00000012899) gca (ENSIPUG00000012868) etv5b (ENSIPUG00000012808) CACNB4 (ENSIPUG00000012735) inpp4ab (ENSIPUG00000012606) TMEM182 (ENSIPUG00000012557) ENSIPUG00000012540 ENSIPUG00000012444 pou3f3b (ENSIPUG00000012430) MRPS9 (ENSIPUG00000012385) GPR45 (ENSIPUG00000012376) tgfbrap1 (ENSIPUG00000012271) Characiphysae_b ANCESTRAL SPECIES 50 ENSGT00940000162403 ENSGT00940000158781.f ENSGT00440000037606.b ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000153514.b.m.b ENSGT00940000157974.h ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00390000010523.c.b.g.b ENSGT00390000009987 ENSGT00940000155515.a.a ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT01050000244857.B.b.g ENSGT00940000159281 ENSGT00390000008812.a.b ##22 ENSGT00940000160306.o.a ENSGT00390000016940.c.b.b ENSGT00940000155522.g.b ENSGT00390000003164 ENSGT00940000154095.b.b.a.a ENSGT00940000153979.A ENSGT00940000165279.d ENSGT00950000182837.b.b.c.a ENSGT00940000164275.f ENSGT00940000157360.c ENSGT00390000017581.b.b ENSGT00940000164385.a.a.a.b.d ENSGT00390000011204 ENSGT00950000183001.a.b.b.l ENSGT00530000063596.A.i Electric eel MODERN SPECIES 81 casp20 (ENSEEEG00000019888) dytn (ENSEEEG00000019887) ADAM23 (ENSEEEG00000019885) eef1b2 (ENSEEEG00000019878) ndufs1 (ENSEEEG00000019771) ino80db (ENSEEEG00000019765) KCNJ3 (ENSEEEG00000019764) rprmb (ENSEEEG00000019763) arl6ip6 (ENSEEEG00000019762) ENSEEEG00000019759 MYLK (ENSEEEG00000019756) gmppab (ENSEEEG00000019738) asic4b (ENSEEEG00000019728) CHPF (ENSEEEG00000019725) ENSEEEG00000019724 cdk5r2a (ENSEEEG00000019722) ##22 tmem198b (ENSEEEG00000019721) desmb (ENSEEEG00000019720) dnpep (ENSEEEG00000019637) ENSEEEG00000019620 gca (ENSEEEG00000019619) etv5b (ENSEEEG00000019614) cacnb4b (ENSEEEG00000019174) ENSEEEG00000019141 inpp4ab (ENSEEEG00000018651) TMEM182 (ENSEEEG00000018631) pou3f3b (ENSEEEG00000018630) mrps9 (ENSEEEG00000018498) GPR45 (ENSEEEG00000018482) tgfbrap1 (ENSEEEG00000018481) FHL2 (ENSEEEG00000018469) Characoidei ANCESTRAL SPECIES 44 ENSGT00940000162403 ENSGT00940000158781.f ENSGT00440000037606.b ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000153514.b.m.b ENSGT00940000157974.h ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00390000010523.c.b.g.b ENSGT00390000009987 ENSGT00940000155515.a.a ENSGT00940000157018.i.b ENSGT01030000234748.b ENSGT00940000159052.n ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 ENSGT00940000160306.o.a ENSGT00390000016940.c.b.b ENSGT00940000155522.g.b ENSGT00390000003164 ENSGT00940000154095.b.b.a.a ENSGT00940000153979.A ENSGT00940000165279.d ENSGT00950000182837.b.b.c.a ENSGT00940000157360.c ENSGT00390000017581.b.b ENSGT00940000164385.a.a.a.b.d ENSGT00390000011204 ENSGT00950000183001.a.b.b.l ENSGT00530000063596.A.i ENSGT00950000183028.a.a.a.g.b.g.b Red-bellied piranha MODERN SPECIES 247 CHPF (ENSPNAG00000020733) ENSPNAG00000020712 cdk5r2a (ENSPNAG00000020705) ##22 cryba2a (ENSPNAG00000020690) tmem198b (ENSPNAG00000020677) desmb (ENSPNAG00000020675) dnpep (ENSPNAG00000020663) PTPRN (ENSPNAG00000020618) gca (ENSPNAG00000020598) etv5b (ENSPNAG00000020577) cacnb4b (ENSPNAG00000020505) inpp4ab (ENSPNAG00000020430) TMEM182 (ENSPNAG00000020241) pou3f3b (ENSPNAG00000020194) mrps9 (ENSPNAG00000020186) GPR45 (ENSPNAG00000020176) tgfbrap1 (ENSPNAG00000020165) fhl2b (ENSPNAG00000003625) Mexicana tetra MODERN SPECIES 4 bcl6aa (ENSAMXG00000004743) lpp (ENSAMXG00000037269) tprg1 (ENSAMXG00000030461) ENSAMXG00000036891 tp63 (ENSAMXG00000004843) tbc1d23 (ENSAMXG00000004842) ENSAMXG00000029369 ENSAMXG00000040591 MYLK (ENSAMXG00000015117) gmppab (ENSAMXG00000015068) asic4b (ENSAMXG00000037643) ENSAMXG00000040259 ENSAMXG00000042561 CHPF (ENSAMXG00000042101) ENSAMXG00000037439 cdk5r2a (ENSAMXG00000026091) ##22 cryba2a (ENSAMXG00000002203) tmem198b (ENSAMXG00000002185) desmb (ENSAMXG00000002143) dnpep (ENSAMXG00000002139) PTPRN (ENSAMXG00000002098) ENSAMXG00000033115 gca (ENSAMXG00000002070) etv5b (ENSAMXG00000032420) cacnb4b (ENSAMXG00000034338) inpp4ab (ENSAMXG00000001687) TMEM182 (ENSAMXG00000034000) ENSAMXG00000035618 pou3f3b (ENSAMXG00000040679) mrps9 (ENSAMXG00000009629) GPR45 (ENSAMXG00000042345) Cyprinoidei ANCESTRAL SPECIES 51 ENSGT00940000166591 ENSGT00940000164225 ENSGT00940000162403 ENSGT00940000158781.f ENSGT00950000183014.f.a ENSGT00940000153514.b.m.b ENSGT00940000157974.h ENSGT01080000257365.b.a.a.b.a.y.a ENSGT00390000010523.c.b.g.b ENSGT00390000009987 ENSGT00940000155515.a.a ENSGT01030000234748.b ENSGT00940000157018.i.b ENSGT00940000159052.m.b.b ENSGT01050000244857.B.b.g ENSGT00390000008812.a.b ##22 ENSGT00940000160306.o.a ENSGT00390000016940.c.b.b ENSGT00940000155522.g.b ENSGT00390000003164 ENSGT00940000154095.b.b.a.a ENSGT00940000153979.A ENSGT00940000165279.d ENSGT00950000182837.b.b.c.a ENSGT00940000157360.c ENSGT00390000017581.b.b ENSGT00940000164385.a.a.a.b.d ENSGT00390000011204 ENSGT00530000063596.A.i ENSGT00950000183028.a.a.a.g.b.g.b ENSGT00390000007225 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 20 ENSGT00940000158781.f.b ENSGT00970000193449 ENSGT00950000183014.f.a.bb ENSGT00940000153514.b.m.b.a ENSGT00940000157974.h.b ENSGT01080000257365.b.a.a.b.a.y.a.b ENSGT00390000010523.c.b.g.b.b ENSGT00940000155515.a.a.b ENSGT00940000157879.yb.a.b ENSGT00940000157879.xb ENSGT01030000234748.b.a ENSGT00940000157018.i.b.b ENSGT00940000159052.m.b.b.a ENSGT01050000244857.B.b.g.b ENSGT00940000159281.j ENSGT00390000008812.a.b.a ##22 ENSGT00940000160306.o.a.a.b ENSGT00390000016940.c.b.b.a.b ENSGT00940000155522.g.b.i ENSGT00940000154095.b.b.a.a.k.b ENSGT00940000165279.d.g ENSGT00950000182837.b.b.c.a.a.a ENSGT00940000157360.c.a.b ENSGT00390000017581.b.b.a ENSGT00940000164385.a.a.a.b.d.a ENSGT00390000011204.c ENSGT00530000063596.A.i.b ENSGT00950000183028.a.a.a.g.b.g.b.a ENSGT00390000007225.bc ENSGT00940000157728.a.a.c.a ENSGT00970000193621.c.a Cyprininae_a ANCESTRAL SPECIES 30 ENSGT00940000162403.a ENSGT00940000158781.f.a ENSGT00950000183014.f.a.cb ENSGT00940000153514.b.m.b.b ENSGT00940000157974.h.a ENSGT01080000257365.b.a.a.b.a.y.a.a ENSGT00390000010523.c.b.g.b.a ENSGT00390000009987 ENSGT00940000155515.a.a.a ENSGT00940000157879.yb.a.a ENSGT00940000157018.i.b.a ENSGT01030000234748.b.b ENSGT00940000159052.m.b.b.b ENSGT01050000244857.B.b.g.a ENSGT00940000159281.j.b ENSGT00390000008812.a.b.a ##22 ENSGT00940000160306.o.a.a.b ENSGT00390000016940.c.b.b.a.b ENSGT00940000155522.g.b.i Common carp reference MODERN SPECIES 10 dytn (ENSCCRG00000008801) ENSCCRG00000002526 ENSCCRG00000002514 ndufs1 (ENSCCRG00000002488) ino80db (ENSCCRG00000030058) KCNJ3 (ENSCCRG00000030065) rprmb (ENSCCRG00000078403) arl6ip6 (ENSCCRG00000033889) ENSCCRG00000026324 ENSCCRG00000072960 ENSCCRG00000026142 gmppab (ENSCCRG00000025877) asic4b (ENSCCRG00000033543) CHPF (ENSCCRG00000073433) ENSCCRG00000068062 cdk5r2a (ENSCCRG00000061218) ##22 cryba2a (ENSCCRG00000058026) ENSCCRG00000054164 tmem198b (ENSCCRG00000014530) desmb (ENSCCRG00000079650) ENSCCRG00000054674 dnpep (ENSCCRG00000014862) PTPRN (ENSCCRG00000081755) gca (ENSCCRG00000061332) etv5b (ENSCCRG00000044625) cacnb4b (ENSCCRG00000067588) inpp4ab (ENSCCRG00000038974) TMEM182 (ENSCCRG00000021427) pou3f3b (ENSCCRG00000059859) mrps9 (ENSCCRG00000040184) tgfbrap1 (ENSCCRG00000040206) Goldfish MODERN SPECIES 46 casp20 (ENSCARG00000050664) dytn (ENSCARG00000050683) ADAM23 (ENSCARG00000050746) eef1b2 (ENSCARG00000051338) ndufs1 (ENSCARG00000051504) ino80db (ENSCARG00000052358) KCNJ3 (ENSCARG00000019769) rprmb (ENSCARG00000019778) arl6ip6 (ENSCARG00000019784) ENSCARG00000019966 MYLK (ENSCARG00000024481) gmppab (ENSCARG00000024939) asic4b (ENSCARG00000025178) CHPF (ENSCARG00000025358) ENSCARG00000025363 cdk5r2a (ENSCARG00000025366) ##22 cryba2a (ENSCARG00000025368) tmem198b (ENSCARG00000025392) desmb (ENSCARG00000025403) ENSCARG00000025478 etv5b (ENSCARG00000025732) cacnb4b (ENSCARG00000025849) inpp4ab (ENSCARG00000026593) ENSCARG00000027317 TMEM182 (ENSCARG00000027327) pou3f3b (ENSCARG00000027381) mrps9 (ENSCARG00000027413) tgfbrap1 (ENSCARG00000027593) fhl2b (ENSCARG00000027633) dph3 (ENSCARG00000027646) nck2b (ENSCARG00000027663) Cyprininae ANCESTRAL SPECIES 298 ENSGT00390000008812.a.b.b ##22 ENSGT00940000160306.o.a.a.a ENSGT00390000016940.c.b.b.a.a ENSGT00940000155522.g.b.j ENSGT00390000003164 ENSGT00940000154095.b.b.a.a.l ENSGT00940000154095.b.b.a.a.k.a ENSGT00940000153979.A ENSGT00940000165279.d.h ENSGT00950000182837.b.b.c.a.a.b ENSGT00940000157360.c.a.a ENSGT00950000182837.b.b.c.a.b ENSGT00940000157360.c.b ENSGT00390000017581.b.b.b ENSGT00940000164385.a.a.a.b.d.b ENSGT00390000011204.d Goldfish MODERN SPECIES 24 casp20 (ENSCARG00000020011) ADAM23 (ENSCARG00000019471) ENSCARG00000019432 eef1b2 (ENSCARG00000019419) ndufs1 (ENSCARG00000018650) ino80db (ENSCARG00000018599) KCNJ3 (ENSCARG00000018583) rprmb (ENSCARG00000018580) ENSCARG00000018553 ENSCARG00000017989 ENSCARG00000017882 ENSCARG00000017867 ENSCARG00000017855 gmppab (ENSCARG00000017805) asic4b (ENSCARG00000017730) cdk5r2a (ENSCARG00000017715) ##22 cryba2a (ENSCARG00000017697) tmem198b (ENSCARG00000017682) desmb (ENSCARG00000017612) ENSCARG00000017597 ENSCARG00000017593 dnpep (ENSCARG00000017544) ENSCARG00000017530 PTPRN (ENSCARG00000017421) gca (ENSCARG00000017372) etv5b (ENSCARG00000017334) cacnb4b (ENSCARG00000016380) inpp4ab (ENSCARG00000011048) ENSCARG00000010816 ENSCARG00000010813 ENSCARG00000010809 Cyprininae_a ANCESTRAL SPECIES 13 ENSGT00940000162403.b ENSGT00940000158781.f.b ENSGT00970000193449 ENSGT00950000183014.f.a.bb ENSGT00940000153514.b.m.b.a ENSGT00940000157974.h.b ENSGT01080000257365.b.a.a.b.a.y.a.b ENSGT00390000010523.c.b.g.b.b ENSGT00940000155515.a.a.b ENSGT00940000157879.yb.a.b ENSGT00940000157018.i.b.b ENSGT01030000234748.b.a ENSGT00940000159052.m.b.b.a ENSGT01050000244857.B.b.g.b ENSGT00940000159281.j.a ENSGT00390000008812.a.b.b ##22 ENSGT00940000160306.o.a.a.a ENSGT00390000016940.c.b.b.a.a ENSGT00940000155522.g.b.j ENSGT00390000003164.a ENSGT00940000154095.b.b.a.a.k.a ENSGT00940000153979.A ENSGT00940000165279.d.h ENSGT00950000182837.b.b.c.a.a.b ENSGT00940000157360.c.a.a ENSGT00950000182837.b.b.c.a.b ENSGT00940000157360.c.b ENSGT00390000017581.b.b.b ENSGT00940000164385.a.a.a.b.d.b ENSGT00530000063596.A.i.a ENSGT00950000183028.a.a.a.g.b.g.b.b Common carp reference MODERN SPECIES 16 casp20 (ENSCCRG00000008807) dytn (ENSCCRG00000022242) ADAM23 (ENSCCRG00000021237) ndufs1 (ENSCCRG00000059554) eef1b2 (ENSCCRG00000002495) ino80db (ENSCCRG00000002484) ENSCCRG00000060682 rprmb (ENSCCRG00000030067) ENSCCRG00000037061 ENSCCRG00000026180 gmppab (ENSCCRG00000066120) ENSCCRG00000002863 asic4b (ENSCCRG00000043321) ENSCCRG00000014425 ENSCCRG00000079745 cdk5r2a (ENSCCRG00000014962) ##22 cryba2a (ENSCCRG00000014449) tmem198b (ENSCCRG00000065674) desmb (ENSCCRG00000014543) dnpep (ENSCCRG00000033549) PTPRN (ENSCCRG00000033525) gca (ENSCCRG00000068612) etv5b (ENSCCRG00000044433) cacnb4b (ENSCCRG00000067064) inpp4ab (ENSCCRG00000039191) ENSCCRG00000079333 ENSCCRG00000081529 ENSCCRG00000060811 pou3f3b (ENSCCRG00000040189) tgfbrap1 (ENSCCRG00000054502) fhl2b (ENSCCRG00000040198) Golden-line barbel MODERN SPECIES 1066 eef1b2 (ENSSGRG00000016786) ENSSGRG00000016798 ndufs1 (ENSSGRG00000016800) eef1b2 (ENSSGRG00000016808) ino80db (ENSSGRG00000016847) KCNJ3 (ENSSGRG00000016849) rprmb (ENSSGRG00000016850) arl6ip6 (ENSSGRG00000016851) ENSSGRG00000016876 MYLK (ENSSGRG00000017316) gmppab (ENSSGRG00000017318) ENSSGRG00000017324 asic4b (ENSSGRG00000017325) ENSSGRG00000017326 ENSSGRG00000017327 cdk5r2a (ENSSGRG00000017340) ##22 cryba2a (ENSSGRG00000017341) tmem198b (ENSSGRG00000017349) desmb (ENSSGRG00000017382) Zebrafish MODERN SPECIES 21 dytn (ENSDARG00000071025) ADAM23 (ENSDARG00000062323) eef1b2 (ENSDARG00000044521) ENSDARG00000111107 ndufs1 (ENSDARG00000028546) ino80db (ENSDARG00000062226) KCNJ3 (ENSDARG00000062217) rprmb (ENSDARG00000024006) arl6ip6 (ENSDARG00000071013) ENSDARG00000075041 MYLK (ENSDARG00000004753) gmppab (ENSDARG00000023498) asic4b (ENSDARG00000004243) CHPF (ENSDARG00000078037) ENSDARG00000038283 cdk5r2a (ENSDARG00000071011) ##22 tmem198b (ENSDARG00000034685) cryba2a (ENSDARG00000030349) desmb (ENSDARG00000005221) dnpep (ENSDARG00000022599) PTPRN (ENSDARG00000077047) gca (ENSDARG00000020187) etv5b (ENSDARG00000044511) cacnb4b (ENSDARG00000062174) inpp4ab (ENSDARG00000070995) TMEM182 (ENSDARG00000087285) pou3f3b (ENSDARG00000095896) mrps9 (ENSDARG00000061505) tgfbrap1 (ENSDARG00000061508) fhl2b (ENSDARG00000003991) dph3 (ENSDARG00000043360) Euteleosteomorpha ANCESTRAL SPECIES 305 ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000178870 ENSGT00940000161625.m ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000155248.vb ENSGT00390000012731.a.b.i Protacanthopterygii ANCESTRAL SPECIES 66 ENSGT00950000183038.a.b.b.b.r ENSGT00390000001718.b ENSGT01000000221844 ENSGT00550000074981 ENSGT01000000214434.B.a.b ENSGT00990000204351 ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B ENSGT00390000018525.a.b.e.a ENSGT00940000160000 ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000155248.vb.f ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b ENSGT00950000183014.f.a ENSGT00940000162403 ENSGT00980000202691 ENSGT00390000006826 ENSGT00940000165235.a.a ENSGT00940000156186.l.a ENSGT00940000168325 ENSGT00950000183140.a.a ENSGT01000000220465 ENSGT00950000182910.a.a.d ENSGT00390000003896 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 57 ENSGT00950000183165.a.a.b ENSGT00950000183038.a.b.b.b.r ENSGT00390000001718.b.b.a.a ENSGT01000000221844 ENSGT00550000074981 ENSGT01000000214434.B.a.b.a ENSGT00990000204351 ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B.d ENSGT00940000160000.e ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.c.a ##22 ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00940000179271 ENSGT00940000178777 ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000165235.a.a.b ENSGT00940000156186.l.a.c ENSGT00940000168325 ENSGT00950000183140.a.a Salmoninae_a ANCESTRAL SPECIES 664 ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.c.a ##22 Oncorhynchus ANCESTRAL SPECIES 542 ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.c.a ##22 Rainbow trout MODERN SPECIES 258 ENSOMYG00000068860 ENSOMYG00000075010 ##22 Huchen MODERN SPECIES 5629 ENSHHUG00000029502 ENSHHUG00000029506 ENSHHUG00000029511 ENSHHUG00000029514 ##22 ENSHHUG00000029516 Salmoninae ANCESTRAL SPECIES 1383 ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ##22 ENSGT00940000155248.vb.e Huchen DUPLICATION Huchen MODERN SPECIES 3638 ENSHHUG00000048913 ENSHHUG00000048928 ATP7B (ENSHHUG00000048938) hikeshi (ENSHHUG00000049288) eed (ENSHHUG00000049291) ENSHHUG00000049330 ENSHHUG00000049343 ENSHHUG00000049344 sft2d2b (ENSHHUG00000049346) ENSHHUG00000049354 ENSHHUG00000049357 ENSHHUG00000049361 ENSHHUG00000049365 ENSHHUG00000049536 cdk5r2a (ENSHHUG00000049538) ##22 ENSHHUG00000049541 ##22 ENSHHUG00000049543 Huchen MODERN SPECIES 3638 pwp2h (ENSHHUG00000048777) ENSHHUG00000048913 ENSHHUG00000048928 ATP7B (ENSHHUG00000048938) hikeshi (ENSHHUG00000049288) eed (ENSHHUG00000049291) ENSHHUG00000049330 ENSHHUG00000049343 ENSHHUG00000049344 sft2d2b (ENSHHUG00000049346) ENSHHUG00000049354 ENSHHUG00000049357 ENSHHUG00000049361 ENSHHUG00000049365 ENSHHUG00000049536 cdk5r2a (ENSHHUG00000049538) ##22 ENSHHUG00000049541 ##22 ENSHHUG00000049543 Salmoninae_a ANCESTRAL SPECIES 59 ENSGT00390000001718.b.b.a.b ENSGT00550000074981 ENSGT01000000214434.B.a.b.a ENSGT00990000204351.a ENSGT01000000214434.B.a.b.b ENSGT00990000204351.b ENSGT00940000155749.d ENSGT00390000004056 ENSGT00510000047334 ENSGT00940000153695.B.d ENSGT00940000160000.e ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.h.a.a ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ##22 ENSGT00940000155248.vb.e ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a ENSGT00940000162403 ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000165235.a.a.b ENSGT00940000156186.l.a.c ENSGT00530000064359.c.b.n ENSGT00940000164697.b.m.b ENSGT00940000154645.B.d ENSGT00940000155675.p.b Oncorhynchus ANCESTRAL SPECIES 66 ENSGT00940000155749.d ENSGT00390000004056.pb ENSGT00510000047334.w ENSGT00390000004056.qb ENSGT00510000047334.x ENSGT00940000153695.B.d ENSGT00940000156207.b.c.a.b.b.b ENSGT00940000156207.b.c.b.a.a.b ENSGT00940000156207.b.c.b.a.a.a ENSGT00390000018525.a.b.e.a ENSGT00940000160000.f ENSGT00390000002188 ENSGT00390000017916 ENSGT00940000155515.a.a.h.a.a ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ##22 ENSGT00940000155248.vb.e ENSGT01060000253578 ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g.d ENSGT00950000183014.f.a ENSGT00940000162403.c ENSGT00390000006826 ENSGT00940000165235.a.a.a ENSGT00940000156186.l.a.c ENSGT00940000155675.p.b ENSGT00950000183140.a.a.k.b ENSGT00940000156056.A.j.c ENSGT00950000182910.a.a.d Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 9 ENSOMYG00000007725 ENSOMYG00000008885 ENSOMYG00000008375 ENSOMYG00000008599 ENSOMYG00000009899 ck073 (ENSOMYG00000061426) ENSOMYG00000076427 ENSOMYG00000013419 ENSOMYG00000013438 ENSOMYG00000013450 sft2d2b (ENSOMYG00000065190) ENSOMYG00000056166 ENSOMYG00000067658 ENSOMYG00000057369 ENSOMYG00000010509 ENSOMYG00000010566 ##22 ENSOMYG00000076187 ENSOMYG00000066169 ENSOMYG00000004303 arl6ip6 (ENSOMYG00000057345) ndufs1 (ENSOMYG00000004516) eef1b2 (ENSOMYG00000004672) dytn (ENSOMYG00000054532) ENSOMYG00000066384 zswim2 (ENSOMYG00000072822) ENSOMYG00000063065 ENSOMYG00000002083 ENSOMYG00000008966 ENSOMYG00000058069 ENSOMYG00000008893 ENSOMYG00000054145 Rainbow trout MODERN SPECIES 80 ENSOMYG00000056636 ##22 Oncorhynchus_a ANCESTRAL SPECIES 399 ENSGT00940000155515.a.a.h.a.b ENSGT00390000008812.a.b.c.b ##22 ENSGT00940000155248.vb.e ENSGT01060000253578 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 34 ENSOKIG00005048778 pwp2h (ENSOKIG00005048674) GK3 (ENSOKIG00005048415) ENSOKIG00005048379 ATP7B (ENSOKIG00005046428) hikeshi (ENSOKIG00005046200) eed (ENSOKIG00005046074) ENSOKIG00005046051 ENSOKIG00005046040 ENSOKIG00005046033 sft2d2b (ENSOKIG00005046022) ENSOKIG00005046015 ENSOKIG00005046007 ENSOKIG00005046001 ENSOKIG00005042513 cdk5r2a (ENSOKIG00005042176) ##22 Coho salmon MODERN SPECIES 25 ADGRG7 (ENSOKIG00005001035) abi3bpb (ENSOKIG00005000955) ENSOKIG00005000897 senp7b (ENSOKIG00005000879) ENSOKIG00005000865 ENSOKIG00005000858 ENSOKIG00005000850 ENSOKIG00005000842 cybb (ENSOKIG00005000822) ENSOKIG00005000802 rpgrb (ENSOKIG00005000795) TSPAN7 (ENSOKIG00005000787) mid1ip1b (ENSOKIG00005000785) ENSOKIG00005000782 ENSOKIG00005000773 ENSOKIG00005000768 ##22 ENSOKIG00005000761 ENSOKIG00005000758 ENSOKIG00005000747 ENSOKIG00005000735 arl6ip6 (ENSOKIG00005000730) ndufs1 (ENSOKIG00005000698) eef1b2 (ENSOKIG00005000679) dytn (ENSOKIG00005000663) ENSOKIG00005000643 ENSOKIG00005000316 ENSOKIG00005000027 GULP1 (ENSOKIG00005000009) Salmoninae ANCESTRAL SPECIES 1976 ENSGT00390000008812.a.b.d ##22 ENSGT00940000155248.vb.f.b Salmoninae_a ANCESTRAL SPECIES 856 ENSGT00390000008812.a.b.d ##22 ENSGT00940000155248.vb.f.b Salmo ANCESTRAL SPECIES 241 ENSGT00390000017916.c ENSGT00940000155515.a.a.g.b ENSGT00390000008812.a.b.d ##22 ENSGT00940000155248.vb.f.a.b ENSGT00390000012731.a.b.i ENSGT00390000009987 ENSGT00940000153514.b.m.b.g ENSGT00950000183014.f.a.w ENSGT00940000178777 ENSGT00390000006826.f ENSGT00940000165235.a.a.b.a Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 7 ENSSSAG00000116115 ENSSSAG00000045894 glpk3 (ENSSSAG00000045972) ENSSSAG00000093775 ENSSSAG00000046633 ENSSSAG00000040247 ENSSSAG00000046298 ENSSSAG00000046310 ENSSSAG00000046459 ENSSSAG00000033202 sft2d2b (ENSSSAG00000093441) ENSSSAG00000109602 ENSSSAG00000054519 ENSSSAG00000101961 ENSSSAG00000092634 ENSSSAG00000118756 ##22 ENSSSAG00000017658 ENSSSAG00000113561 ENSSSAG00000041229 arl6ip6 (ENSSSAG00000041213) ndufs1 (ENSSSAG00000042889) eef1b2 (ENSSSAG00000041178) dytn (ENSSSAG00000041139) ENSSSAG00000041061 ENSSSAG00000009203 ENSSSAG00000042710 ENSSSAG00000010250 ENSSSAG00000100401 ENSSSAG00000052189 ENSSSAG00000117507 ENSSSAG00000099607 Atlantic salmon MODERN SPECIES 8 tuba8l2 (ENSSSAG00000015785) ENSSSAG00000042186 ENSSSAG00000008545 ENSSSAG00000013302 ENSSSAG00000012823 ENSSSAG00000007072 ENSSSAG00000006987 ENSSSAG00000114830 ENSSSAG00000099614 ENSSSAG00000121919 ENSSSAG00000106943 ENSSSAG00000082954 ENSSSAG00000006972 ENSSSAG00000044440 ENSSSAG00000089218 ENSSSAG00000098018 ##22 ENSSSAG00000109371 ENSSSAG00000099867 ENSSSAG00000041206 ENSSSAG00000042864 ENSSSAG00000042848 zswim2 (ENSSSAG00000090849) ENSSSAG00000007434 ENSSSAG00000109146 ENSSSAG00000095702 ENSSSAG00000081759 ENSSSAG00000042777 ENSSSAG00000101211 ENSSSAG00000010129 vps16 (ENSSSAG00000042745) ENSSSAG00000017401 Northern pike MODERN SPECIES 21 ENSELUG00000034064 pwp2h (ENSELUG00000001878) ENSELUG00000001883 ENSELUG00000001886 ATP7B (ENSELUG00000001889) hikeshi (ENSELUG00000001892) eed (ENSELUG00000001896) ENSELUG00000001900 ENSELUG00000001909 ENSELUG00000001903 sft2d2b (ENSELUG00000001914) ENSELUG00000001301 iqcb1 (ENSELUG00000001921) ENSELUG00000001926 ENSELUG00000001957 cdk5r2a (ENSELUG00000001981) ##22 ENSELUG00000001996 ENSELUG00000002002 ENSELUG00000002006 ENSELUG00000002008 ndufs1 (ENSELUG00000002014) eef1b2 (ENSELUG00000002024) ENSELUG00000002029 ENSELUG00000029434 zswim2 (ENSELUG00000002031) ENSELUG00000002039 GULP1 (ENSELUG00000002071) ENSELUG00000002079 ENSELUG00000030203 ENSELUG00000002089 ENSELUG00000030053 Acanthomorphata ANCESTRAL SPECIES 281 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000155248.vb ENSGT00390000002188 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00390000014995 ENSGT00390000003896 ENSGT00730000111696.a ENSGT00940000153571.b ENSGT00940000164059 Euacanthomorphacea ANCESTRAL SPECIES 130 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00390000002188 ENSGT00940000160000 ENSGT00390000018525.a.b.f ENSGT00390000014995 ENSGT00390000003896 ENSGT00730000111696.a ENSGT00940000153571.b ENSGT00940000164059 ENSGT00940000165332.C Percomorphaceae ANCESTRAL SPECIES 256 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Percomorphaceae_D ANCESTRAL SPECIES 27 ENSGT00940000168428.b.b.b ENSGT00940000177273 ENSGT00940000168428.b.a ENSGT00940000167421 ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Anabantaria ANCESTRAL SPECIES 39 ENSGT00940000164897.a.b ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000158714.c ENSGT01100000263502.A.a.a.a.b.a.b ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Zig-zag eel MODERN SPECIES 11 glsa (ENSMAMG00000022523) ENSMAMG00000022525 ENSMAMG00000022527 ENSMAMG00000022531 ENSMAMG00000022534 CLASP1 (ENSMAMG00000022535) ENSMAMG00000022543 INHBB (ENSMAMG00000027863) ENSMAMG00000022548 faimb (ENSMAMG00000022549) ENSMAMG00000022551 ENSMAMG00000022554 gbx2 (ENSMAMG00000022558) ENSMAMG00000022559 ENSMAMG00000022560 ENSMAMG00000026849 ##22 ENSMAMG00000022563 ENSMAMG00000024349 ENSMAMG00000022565 ENSMAMG00000026531 ENSMAMG00000022568 ENSMAMG00000022570 ENSMAMG00000022576 ENSMAMG00000022581 ENSMAMG00000022585 ENSMAMG00000022607 ENSMAMG00000022610 ENSMAMG00000022611 ENSMAMG00000022612 ENSMAMG00000022787 ENSMAMG00000022621 Anabantoidei ANCESTRAL SPECIES 28 ENSGT00940000158239.a.b ENSGT00390000007225 ENSGT00940000164897.a.b ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Climbing perch MODERN SPECIES 11 ENSATEG00000007985 ENSATEG00000007873 ENSATEG00000007735 ENSATEG00000007677 ENSATEG00000007628 ENSATEG00000007350 ENSATEG00000007319 ENSATEG00000007276 ENSATEG00000007233 ENSATEG00000007214 cavin2b (ENSATEG00000007204) ENSATEG00000007199 ENSATEG00000007190 rgn (ENSATEG00000007169) ENSATEG00000007079 ENSATEG00000007065 ##22 Carangaria ANCESTRAL SPECIES 38 ENSGT00940000168428.b.b.b ENSGT00940000177273 ENSGT00940000168428.b.a ENSGT00940000167421 ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Carangaria_A ANCESTRAL SPECIES 114 ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Seriola ANCESTRAL SPECIES 71 ENSGT00530000063564.b.a.a ENSGT01090000260051.b.b.dc.a ENSGT00940000154067.c ENSGT00940000168428.b.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Yellowtail amberjack MODERN SPECIES 3118 mlpha (ENSSLDG00000009436) ENSSLDG00000009468 ACKR3 (ENSSLDG00000009542) ENSSLDG00000009560 cd59 (ENSSLDG00000009620) dytn (ENSSLDG00000009636) eef1b2 (ENSSLDG00000009674) ENSSLDG00000009701 arl11 (ENSSLDG00000009763) EBPL (ENSSLDG00000009776) cavin2b (ENSSLDG00000009807) vps16 (ENSSLDG00000009858) rgn (ENSSLDG00000009907) ENSSLDG00000009948 cdk5r2a (ENSSLDG00000010009) ##22 rps24 (ENSSLDG00000010022) ENSSLDG00000010033 Greater amberjack MODERN SPECIES 152 mlpha (ENSSDUG00000003860) ENSSDUG00000003894 ACKR3 (ENSSDUG00000004012) ENSSDUG00000004020 ENSSDUG00000004082 cd59 (ENSSDUG00000004301) dytn (ENSSDUG00000004316) eef1b2 (ENSSDUG00000004353) ENSSDUG00000004389 arl11 (ENSSDUG00000004422) ebpl (ENSSDUG00000004433) cavin2b (ENSSDUG00000004448) vps16 (ENSSDUG00000004508) rgn (ENSSDUG00000004611) ENSSDUG00000004654 cdk5r2a (ENSSDUG00000005352) ##22 Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 42 ENSLCAG00010026783 LRRFIP1 (ENSLCAG00010026766) trim63a (ENSLCAG00010026760) ACKR3 (ENSLCAG00010026759) iqca1 (ENSLCAG00010026758) snx9a (ENSLCAG00010026755) ENSLCAG00010026752 ENSLCAG00010026745 eef1b2 (ENSLCAG00010026736) arl11 (ENSLCAG00010026725) ebpl (ENSLCAG00010026716) cavin2b (ENSLCAG00010026714) vps16 (ENSLCAG00010026708) rgn (ENSLCAG00010026706) ENSLCAG00010026592 cdk5r2a (ENSLCAG00010026518) ##22 Barramundi perch MODERN SPECIES 1337 ENSLCAG00010023802 ##22 Eupercaria ANCESTRAL SPECIES 40 ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Eupecaria_A ANCESTRAL SPECIES 37 ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Eupecaria_B ANCESTRAL SPECIES 28 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Eupecaria_C ANCESTRAL SPECIES 38 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 76 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000178777 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 European seabass MODERN SPECIES 15 trim63a (ENSDLAG00005028280) ENSDLAG00005032406 ENSDLAG00005031756 ENSDLAG00005002379 st6gal2b (ENSDLAG00005002390) ENSDLAG00005026503 ENSDLAG00005033577 ENSDLAG00005027997 ENSDLAG00005033366 ENSDLAG00005034876 ENSDLAG00005026337 cavin2b (ENSDLAG00005018750) ENSDLAG00005018781 rgn (ENSDLAG00005031710) ENSDLAG00005019157 ENSDLAG00005019606 ##22 ENSDLAG00005014198 Large yellow croaker MODERN SPECIES 86 ENSLCRG00005012454 st6gal2b (ENSLCRG00005012459) trim63a (ENSLCRG00005012460) ACKR3 (ENSLCRG00005012461) snx9a (ENSLCRG00005012475) cd59 (ENSLCRG00005013993) ENSLCRG00005013995 eef1b2 (ENSLCRG00005013996) arl11 (ENSLCRG00005014006) ENSLCRG00005014007 ebpl (ENSLCRG00005014009) cavin2b (ENSLCRG00005014010) vps16 (ENSLCRG00005014013) rgn (ENSLCRG00005014929) ENSLCRG00005015014 CDK5R2 (ENSLCRG00005017538) ##22 Gilthead seabream MODERN SPECIES 16 CLASP1 (ENSSAUG00010019591) ENSSAUG00010026074 clcn4 (ENSSAUG00010026096) ENSSAUG00010026217 ENSSAUG00010026218 ENSSAUG00010026227 ENSSAUG00010026247 ENSSAUG00010026249 ENSSAUG00010026252 ENSSAUG00010026259 ENSSAUG00010026263 vps16 (ENSSAUG00010026266) rgn (ENSSAUG00010026276) ENSSAUG00010026315 ENSSAUG00010026755 ENSSAUG00010026759 ##22 ENSSAUG00010026776 ENSSAUG00010026812 dph3 (ENSSAUG00010026814) ENSSAUG00010026815 st6gal2b (ENSSAUG00010026816) ENSSAUG00010026817 ENSSAUG00010026819 mlpha (ENSSAUG00010026821) ENSSAUG00010026823 trim63a (ENSSAUG00010026825) ACKR3 (ENSSAUG00010026826) snx9a (ENSSAUG00010026831) cd59 (ENSSAUG00010026903) ENSSAUG00010026905 ENSSAUG00010026906 Perciformes ANCESTRAL SPECIES 53 ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a ENSGT01100000263476.E.b.a.a.b.a.a ENSGT00940000157308.h ENSGT00530000063503.a.a.a ENSGT00530000063558.A.c.b ENSGT00390000005581.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Perciformes_a ANCESTRAL SPECIES 46 ENSGT01100000263513.a.a.b.b.b.b.a.a.a.a.a ENSGT01100000263476.E.b.a.a.b.a.a ENSGT00940000157308.h ENSGT00530000063558.A.c.b ENSGT00390000005581.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00980000198690.a ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Pike perch MODERN SPECIES 213 ENSSLUG00000007006 ENSSLUG00000007025 ENSSLUG00000007030 ftcd (ENSSLUG00000007047) cd59 (ENSSLUG00000007084) ENSSLUG00000007138 ENSSLUG00000007144 ENSSLUG00000007159 eef1b2 (ENSSLUG00000007163) arl11 (ENSSLUG00000007173) ebpl (ENSSLUG00000007179) cavin2b (ENSSLUG00000007185) vps16 (ENSSLUG00000007240) rgn (ENSSLUG00000008264) ENSSLUG00000008279 ENSSLUG00000008295 ##22 Cottioidei ANCESTRAL SPECIES 49 ENSGT00940000153571.b ENSGT00940000172021 ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000157308.h ENSGT00530000063503.a.a.a ENSGT00390000005581.a ENSGT00730000111696.a ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Stickleback MODERN SPECIES ENSGACG00000015441 ENSGACG00000015433 cdk15 (ENSGACG00000015430) fzd7a (ENSGACG00000015429) ENSGACG00000015422 ENSGACG00000015420 ftcd (ENSGACG00000015411) cd59 (ENSGACG00000015409) ENSGACG00000015406 eef1b2 (ENSGACG00000015402) arl11 (ENSGACG00000015399) cavin2b (ENSGACG00000015398) vps16 (ENSGACG00000015383) rgn (ENSGACG00000015380) ENSGACG00000015371 cdk5r2a (ENSGACG00000015367) ##22 ENSGACG00000015364 TAAR1 (ENSGACG00000015361) ENSGACG00000015358 ENSGACG00000015357 ENSGACG00000015355 ENSGACG00000015353 ENSGACG00000015352 CHRM4 (ENSGACG00000015349) mdka (ENSGACG00000015348) DGKZ (ENSGACG00000015339) cryaa (ENSGACG00000015336) ENSGACG00000015333 ankrd10a (ENSGACG00000015330) ENSGACG00000015328 ddx4 (ENSGACG00000015323) Lumpfish MODERN SPECIES 11 ENSCLMG00005012293 ENSCLMG00005012291 ENSCLMG00005012290 ftcd (ENSCLMG00005012279) cd59 (ENSCLMG00005012277) ENSCLMG00005012276 eef1b2 (ENSCLMG00005012274) ENSCLMG00005012272 arl11 (ENSCLMG00005012270) ebpl (ENSCLMG00005012249) ENSCLMG00005012247 ENSCLMG00005012246 vps16 (ENSCLMG00005012176) rgn (ENSCLMG00005012174) ENSCLMG00005012043 ENSCLMG00005012040 ##22 Ovalentaria ANCESTRAL SPECIES 31 ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Atherinomorphae ANCESTRAL SPECIES 42 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000164059 ENSGT00940000165332.C ENSGT00530000067036.c ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000001101 ENSGT00940000154505.A.c ENSGT00940000157694 ENSGT00940000154474.B.b ENSGT00940000154474.B.a ENSGT00940000154474.A ENSGT00530000066677 ENSGT00940000158209 ENSGT00390000005914.a ENSGT00390000018208 Oryzias ANCESTRAL SPECIES 74 ENSGT00940000159606 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00730000111696.a ENSGT00940000162403 ENSGT00940000179271 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Oryzias_a ANCESTRAL SPECIES 101 ENSGT00940000164897.a.b ENSGT00940000158239.a.b ENSGT00940000159606 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Chinese medaka MODERN SPECIES 4651 rgn (ENSOSIG00000003744) ENSOSIG00000004035 cdk5r2a (ENSOSIG00000007706) ##22 Japanese Medaka HdrR MODERN SPECIES 11 cdk15 (ENSORLG00000024266) ENSORLG00000026167 ENSORLG00000030005 mlpha (ENSORLG00000018566) cd59 (ENSORLG00000018558) ENSORLG00000028337 ENSORLG00000028428 arl11 (ENSORLG00000018486) eef1b2 (ENSORLG00000018533) ENSORLG00000028756 ebpl (ENSORLG00000018464) cavin2b (ENSORLG00000018433) vps16 (ENSORLG00000022777) rgn (ENSORLG00000025381) ENSORLG00000018917 ENSORLG00000026638 ##22 ENSORLG00000021888 olgc3 (ENSORLG00000018002) ENSORLG00000027803 Oryzias_b ANCESTRAL SPECIES 63 ENSGT00730000111696.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT00940000172652 ENSGT00940000159169 ENSGT00530000063558.A.c.b ENSGT00530000063503.a.a.a ENSGT00940000178125 ENSGT00940000157308.h ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT01030000235241 ENSGT01030000234765 ENSGT00940000153981.A ENSGT00940000159196 ENSGT00940000154443.e ENSGT00940000158367 ENSGT00390000002403 ENSGT00530000063669.b.b ENSGT00940000165242.d ENSGT00390000008096.B.e.b ENSGT00530000063480.a ENSGT00940000164501.a.a.b.a ENSGT00940000163494.a.b.a ENSGT00940000164501.a.a.a.a.a ENSGT00940000163149.a.a Indian medaka MODERN SPECIES 789 ENSOMEG00000007279 mlpha (ENSOMEG00000007229) ENSOMEG00000007159 ENSOMEG00000007133 cdk15 (ENSOMEG00000007020) fzd7a (ENSOMEG00000006996) ENSOMEG00000006993 ENSOMEG00000006982 ENSOMEG00000006959 abi3bpb (ENSOMEG00000006910) ENSOMEG00000006817 ENSOMEG00000006773 senp7b (ENSOMEG00000006756) rgn (ENSOMEG00000006719) ENSOMEG00000006681 ENSOMEG00000006608 ##22 ENSOMEG00000006583 ENSOMEG00000006572 GPR180 (ENSOMEG00000006528) ENSOMEG00000006507 ENSOMEG00000006456 ENSOMEG00000006359 ENSOMEG00000006330 ENSOMEG00000006315 Javanese ricefish MODERN SPECIES 11 ENSOJAG00000008127 mbnl2 (ENSOJAG00000008159) ENSOJAG00000008271 mrpl39 (ENSOJAG00000008285) ENSOJAG00000008325 MCF2L (ENSOJAG00000009688) cab39l (ENSOJAG00000011564) cdadc1 (ENSOJAG00000011573) rcbtb1 (ENSOJAG00000011586) ENSOJAG00000011730 ENSOJAG00000011745 ENSOJAG00000011800 FGF14 (ENSOJAG00000011821) tubgcp3 (ENSOJAG00000011847) ENSOJAG00000014771 ENSOJAG00000014783 ##22 ENSOJAG00000014789 ENSOJAG00000014810 ENSOJAG00000014830 ENSOJAG00000014842 ENSOJAG00000014858 ENSOJAG00000014906 ENSOJAG00000015130 ENSOJAG00000015232 ENSOJAG00000015275 fam184aa (ENSOJAG00000015284) ENSOJAG00000015524 ENSOJAG00000015539 SATB2 (ENSOJAG00000015586) ENSOJAG00000015659 ENSOJAG00000015682 Cyprinodontiformes ANCESTRAL SPECIES 42 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000164059 ENSGT00940000165332.C ENSGT00530000067036.c ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000001101 ENSGT00940000154505.A.c ENSGT00940000157694 ENSGT00940000154474.B.b ENSGT00940000154474.B.a ENSGT00940000154474.A ENSGT00530000066677 ENSGT00940000158209 ENSGT00390000005914.a ENSGT00390000018208 Cyprinodontoidei ANCESTRAL SPECIES 53 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00940000164059 ENSGT00940000165332.C ENSGT00530000067036.c ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000001101 ENSGT00940000154505.A.c ENSGT00940000157694.g.b ENSGT00940000157694.g.a ENSGT00940000154474.B.b ENSGT00940000154474.B.a ENSGT00940000154474.A ENSGT00530000066677 ENSGT00940000158209 Poeciliinae ANCESTRAL SPECIES 34 ENSGT00530000063564.b.a.a ENSGT00530000063564.b.b.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00940000164059 ENSGT00940000165332.C ENSGT00530000067036.c ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000001101 ENSGT00940000154505.A.c ENSGT00940000157694.g.b ENSGT00940000157694.g.a ENSGT00940000154474.B.b ENSGT00940000154474.B.a ENSGT00940000154474.A ENSGT00530000066677 ENSGT00940000158209 Poecilia ANCESTRAL SPECIES 27 ENSGT00530000063503.b ENSGT00940000157308.h ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.c ENSGT00940000164059 ENSGT00940000165332.C ENSGT00530000067036.c ENSGT00390000018525.a.b.f ENSGT00940000160000 ENSGT00390000001101 ENSGT00940000154505.A.c ENSGT00940000157694.g.b ENSGT00940000157694.g.a ENSGT00940000154474.B.b ENSGT00940000154474.B.a ENSGT00940000154474.A ENSGT00530000066677 ENSGT00940000158209 NAME_6 ANCESTRAL SPECIES 257 ENSGT00940000157308.h ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Amazon molly MODERN SPECIES 797 ENSPFOG00000005385 mlpha (ENSPFOG00000005782) ACKR3 (ENSPFOG00000020010) SNX9 (ENSPFOG00000005899) cd59 (ENSPFOG00000006094) ENSPFOG00000023713 ENSPFOG00000006135 ENSPFOG00000022038 eef1b2 (ENSPFOG00000006140) arl11 (ENSPFOG00000006232) ebpl (ENSPFOG00000006272) cavin2b (ENSPFOG00000006316) vps16 (ENSPFOG00000006387) rgn (ENSPFOG00000006626) ENSPFOG00000006762 cdk5r2a (ENSPFOG00000007287) ##22 ENSPFOG00000007290 ENSPFOG00000007306 Sailfin molly MODERN SPECIES 928 senp7b (ENSPLAG00000009863) ENSPLAG00000009854 ENSPLAG00000009833 mlpha (ENSPLAG00000009744) ACKR3 (ENSPLAG00000009727) SNX9 (ENSPLAG00000009719) cd59 (ENSPLAG00000009700) eef1b2 (ENSPLAG00000009681) ENSPLAG00000009643 arl11 (ENSPLAG00000000576) ebpl (ENSPLAG00000009594) cavin2b (ENSPLAG00000009575) vps16 (ENSPLAG00000009563) rgn (ENSPLAG00000009554) ENSPLAG00000009528 ENSPLAG00000009507 ##22 Platyfish MODERN SPECIES 16 ENSXMAG00000023128 ENSXMAG00000025794 ENSXMAG00000021036 mlpha (ENSXMAG00000006029) ACKR3 (ENSXMAG00000006047) cd59 (ENSXMAG00000023562) ENSXMAG00000020979 ENSXMAG00000026383 eef1b2 (ENSXMAG00000006050) arl11 (ENSXMAG00000023188) ebpl (ENSXMAG00000024072) cavin2b (ENSXMAG00000006066) vps16 (ENSXMAG00000006070) rgn (ENSXMAG00000006115) ENSXMAG00000006118 cdk5r2a (ENSXMAG00000006154) ##22 ENSXMAG00000026658 ENSXMAG00000029811 f2 (ENSXMAG00000006156) ENSXMAG00000006219 ENSXMAG00000026004 ENSXMAG00000006226 pcid2 (ENSXMAG00000006230) prozb (ENSXMAG00000006259) ENSXMAG00000027621 f10 (ENSXMAG00000022764) f7i (ENSXMAG00000029396) f7 (ENSXMAG00000006314) f7l (ENSXMAG00000006319) creg1 (ENSXMAG00000023838) ENSXMAG00000006323 Ovalentaria_B ANCESTRAL SPECIES 69 ENSGT00530000063564.b.a.a ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Pomacentridae ANCESTRAL SPECIES 83 ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000153571.b ENSGT00940000175756 ENSGT00940000159969.b.a.b ENSGT00510000048137 ENSGT00940000154607.a ENSGT00390000008846 ENSGT00940000163243 ENSGT00950000182913.A.b.a ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT01030000235241 Pomacentridae_A ANCESTRAL SPECIES 82 ENSGT00940000158714.c ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000153571.b ENSGT00940000175756 ENSGT00940000159969.b.a.b ENSGT00510000048137 ENSGT00940000154607.a ENSGT00390000008846 ENSGT00940000163243 ENSGT00950000182913.A.b.a ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT01030000235241 Amphiprion ANCESTRAL SPECIES 94 ENSGT00940000166042.a ENSGT00950000183138.a.b.r.a ENSGT00530000063564.b.a.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT01090000260059.a.b.b.b.a.d.a.a.b.a.b.b ENSGT00940000162403 ENSGT00970000193449 ENSGT00950000183014.f.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 ENSGT00940000153571.b ENSGT00940000175756 ENSGT00940000159969.b.a.b ENSGT00510000048137 ENSGT00940000154607.a ENSGT00390000008846 ENSGT00940000163243 ENSGT00950000182913.A.b.a ENSGT00940000155248.vb.g.a ENSGT00940000155248.vb.g.b ENSGT00940000159606 ENSGT00940000158239.a.b ENSGT00940000164897.a.b ENSGT00390000007225 ENSGT01030000235241 Orange clownfish MODERN SPECIES 16 ENSAPEG00000007555 SNX9 (ENSAPEG00000007655) cd59 (ENSAPEG00000007881) ENSAPEG00000007898 ENSAPEG00000007904 ENSAPEG00000007918 ENSAPEG00000007927 eef1b2 (ENSAPEG00000007940) ENSAPEG00000007969 arl11 (ENSAPEG00000007983) ebpl (ENSAPEG00000007991) cavin2b (ENSAPEG00000008026) vps16 (ENSAPEG00000008217) rgn (ENSAPEG00000008304) ENSAPEG00000008331 cdk5r2a (ENSAPEG00000008435) ##22 fbxo3 (ENSAPEG00000008443) ENSAPEG00000008497 ENSAPEG00000008519 SH3YL1 (ENSAPEG00000008544) ENSAPEG00000008595 ENSAPEG00000008612 ENSAPEG00000008631 ENSAPEG00000008659 bco1l (ENSAPEG00000008676) ENSAPEG00000008714 ENSAPEG00000008766 cdk15 (ENSAPEG00000008845) fzd7a (ENSAPEG00000008880) ENSAPEG00000008908 dph3 (ENSAPEG00000008920) Clown anemonefish MODERN SPECIES 262 cdk5r2a (ENSAOCG00000005821) ##22 fbxo3 (ENSAOCG00000005854) Spiny chromis MODERN SPECIES 1026 cdk5r2a (ENSAPOG00000016175) ##22 fbxo3 (ENSAPOG00000016222) ENSAPOG00000016239 ENSAPOG00000016263 SH3YL1 (ENSAPOG00000016311) ENSAPOG00000016336 Bicolor damselfish MODERN SPECIES 1736 ENSSPAG00000005844 ENSSPAG00000005833 ENSSPAG00000005814 eef1b2 (ENSSPAG00000005791) arl11 (ENSSPAG00000005773) ebpl (ENSSPAG00000005756) ENSSPAG00000005634 vps16 (ENSSPAG00000005580) ENSSPAG00000005545 cdk5r2a (ENSSPAG00000005535) ##22 ENSSPAG00000005522 ENSSPAG00000005509 SH3YL1 (ENSSPAG00000005481) ENSSPAG00000005451 ENSSPAG00000005383 bco1l (ENSSPAG00000005361) ENSSPAG00000005335 kalrnb (ENSSPAG00000005298) Cichlidae ANCESTRAL SPECIES 100 ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00980000198690.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Pseudocrenilabrinae ANCESTRAL SPECIES 61 ENSGT00950000183138.a.b.r.a ENSGT00940000166042.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00980000198690.a ENSGT00940000166383 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES 3 ENSGT00510000049120 ENSGT00940000156037.a.e ENSGT00940000155981.h ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g ENSGT00730000111696.a ENSGT00980000198690.a ENSGT00940000154907.a.a.x.b ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Haplochromini ANCESTRAL SPECIES 118 ENSGT00530000063715.b ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a ENSGT00390000008812.a.b ##22 Burton s mouthbrooder MODERN SPECIES 1428 rgn (ENSHBUG00000000920) ENSHBUG00000011743 cdk5r2a (ENSHBUG00000011579) ##22 Haplochromini_A ANCESTRAL SPECIES 26 ENSGT00940000155981.h ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000156557.g.e ENSGT00730000111696.a ENSGT00940000162403 ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000154907.a.a.x.b ENSGT00530000063715.b ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a.e.a ENSGT00390000008812.a.b ##22 P. nyererei MODERN SPECIES 356 cdh2 (ENSPNYG00000001907) ENSPNYG00000001972 ENSPNYG00000001993 mlpha (ENSPNYG00000002012) ACKR3 (ENSPNYG00000002062) SNX9 (ENSPNYG00000002081) cd59 (ENSPNYG00000002135) ENSPNYG00000002143 eef1b2 (ENSPNYG00000002183) ENSPNYG00000002322 ENSPNYG00000003113 vps16 (ENSPNYG00000003154) ebpl (ENSPNYG00000003221) rgn (ENSPNYG00000003235) ENSPNYG00000003270 cdk5r2a (ENSPNYG00000003343) ##22 Haplochromini_B ANCESTRAL SPECIES 29 ENSGT00950000183138.a.b.r.a ENSGT01090000260051.b.b.dc.a ENSGT00940000176853.A ENSGT00940000156557.g.e ENSGT00730000111696.a ENSGT00980000198690.a ENSGT00950000183014.f.a ENSGT00970000193449 ENSGT00940000154907.a.a.x.b ENSGT00530000063715.b ENSGT01100000263520.a.b.a.a.a.b.a.b.c.d.a.a.a ENSGT00950000182910.a.a.d ENSGT00390000003896 ENSGT00390000014995 ENSGT00940000155515.a.a.e.a ENSGT00390000008812.a.b ##22 Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1040 ENSMZEG00005025224 cdk5r2a (ENSMZEG00005025230) ##22 Zebra mbuna MODERN SPECIES 1097 ENSMZEG00005003642 ENSMZEG00005003708 ENSMZEG00005003726 cd59 (ENSMZEG00005003755) ENSMZEG00005003773 eef1b2 (ENSMZEG00005003788) ENSMZEG00005003811 ENSMZEG00005003842 ENSMZEG00005003860 ebpl (ENSMZEG00005003878) ENSMZEG00005003894 cavin2b (ENSMZEG00005003917) vps16 (ENSMZEG00005003978) rgn (ENSMZEG00005004076) ENSMZEG00005004100 cdk5r2a (ENSMZEG00005004150) ##22 ENSMZEG00005004166 ENSMZEG00005004200 ACKR3 (ENSMZEG00005004206) mlpha (ENSMZEG00005004215) ENSMZEG00005004242 pim2 (ENSMZEG00005004269) Eastern happy MODERN SPECIES 6 SNX9 (ENSACLG00000003794) cd59 (ENSACLG00000003836) ENSACLG00000003852 ENSACLG00000003860 ENSACLG00000003896 eef1b2 (ENSACLG00000003899) ENSACLG00000003971 ENSACLG00000005209 ebpl (ENSACLG00000005233) ENSACLG00000005236 ENSACLG00000005260 cavin2b (ENSACLG00000005280) vps16 (ENSACLG00000005366) rgn (ENSACLG00000005568) ENSACLG00000005579 cdk5r2a (ENSACLG00000005620) ##22 Lyretail cichlid MODERN SPECIES 312 aqp4 (ENSNBRG00000016579) cdh2 (ENSNBRG00000016523) mlpha (ENSNBRG00000016468) ACKR3 (ENSNBRG00000016441) SNX9 (ENSNBRG00000016290) cd59 (ENSNBRG00000016245) ENSNBRG00000016213 ENSNBRG00000016183 eef1b2 (ENSNBRG00000016163) ENSNBRG00000016137 ebpl (ENSNBRG00000016117) cavin2b (ENSNBRG00000016098) vps16 (ENSNBRG00000016044) rgn (ENSNBRG00000016022) ENSNBRG00000015898 cdk5r2a (ENSNBRG00000015876) ##22 Nile tilapia MODERN SPECIES 526 ENSONIG00000040899 ENSONIG00000036997 rgn (ENSONIG00000036361) ENSONIG00000009112 cdk5r2a (ENSONIG00000009117) ##22 Midas cichlid DUPLICATION Midas cichlid MODERN SPECIES 1596 ENSACIG00000001569 ##22 Midas cichlid MODERN SPECIES 749 ENSACIG00000023202 eef1b2 (ENSACIG00000023214) ENSACIG00000023219 ENSACIG00000023224 arl11 (ENSACIG00000023231) EBPL (ENSACIG00000023235) cavin2b (ENSACIG00000023240) vps16 (ENSACIG00000023255) rgn (ENSACIG00000023265) ENSACIG00000023277 ENSACIG00000023288 ##22 Pinecone sodierfish MODERN SPECIES 11 ENSMMDG00005014142 dnajc27 (ENSMMDG00005014350) ENSMMDG00005014356 creg1 (ENSMMDG00005014361) ENSMMDG00005014363 ENSMMDG00005014368 eef1b2 (ENSMMDG00005014373) arl11 (ENSMMDG00005014389) ebpl (ENSMMDG00005014393) cavin2b (ENSMMDG00005014394) zgc:112023 (ENSMMDG00005014399) rgn (ENSMMDG00005014427) vps16 (ENSMMDG00005014504) ENSMMDG00005017506 ENSMMDG00005017535 cdk5r2a (ENSMMDG00005018309) ##22 kalrnb (ENSMMDG00005018336) ENSMMDG00005018342 ENSMMDG00005018360 ENSMMDG00005018368 ENSMMDG00005018370 ENSMMDG00005018371 f2 (ENSMMDG00005018375) fbxo3 (ENSMMDG00005018421) ENSMMDG00005018424 ENSMMDG00005018427 bco1l (ENSMMDG00005018434) ENSMMDG00005019025 lipt1 (ENSMMDG00005019044) ENSMMDG00005019046 ENSMMDG00005019057 Osteoglossiformes ANCESTRAL SPECIES 427 ENSGT01050000244857.B.b.a ENSGT00940000160299.a ENSGT00390000008812.a.a.b ##22 ENSGT00390000008812.a.b ##22 ENSGT00940000160306.i ENSGT00940000155248.vb.i ENSGT00940000157879.z ENSGT00940000155515.a.b.b.r ENSGT00390000009987 Asian bonytongue MODERN SPECIES 5 NXPH2 (ENSSFOG00015032194) SPOPL (ENSSFOG00015012678) THSD7B (ENSSFOG00015012733) cxcr4a (ENSSFOG00015012893) dars1 (ENSSFOG00015012900) mcm6 (ENSSFOG00015012921) si:ch73-71c20.5 (ENSSFOG00015012997) tmbim1a (ENSSFOG00015026722) pnkd (ENSSFOG00015013028) catip (ENSSFOG00015013062) gmppaa (ENSSFOG00015013081) ENSSFOG00015028170 ENSSFOG00015013161 CHPF (ENSSFOG00015013190) wnt10a (ENSSFOG00015013204) ENSSFOG00015030465 ##22 CRYBA2 (ENSSFOG00015023586) KALRN (ENSSFOG00015013293) ENSSFOG00015029305 MYLK (ENSSFOG00015013458) FMNL2 (ENSSFOG00015013527) ARL6IP6 (ENSSFOG00015013586) RPRM (ENSSFOG00015013592) GALNT13 (ENSSFOG00015013608) KCNJ3 (ENSSFOG00015028713) POLQ (ENSSFOG00015013674) TMEM50B (ENSSFOG00015013846) ENSSFOG00015027488 ENSSFOG00015029318 IL10RB (ENSSFOG00015013899) ENSSFOG00015027641 Spotted gar MODERN SPECIES 650 cavin2b (ENSLOCG00000005117) nabp1a (ENSLOCG00000005133) ftcdnl1 (ENSLOCG00000005144) zgc:153521 (ENSLOCG00000005160) stk17b (ENSLOCG00000005185) HECW2 (ENSLOCG00000005202) gtf3c3 (ENSLOCG00000005238) ENSLOCG00000005251 PGAP1 (ENSLOCG00000005267) maip1 (ENSLOCG00000005288) tyw5 (ENSLOCG00000005300) vps16 (ENSLOCG00000005310) ENSLOCG00000005334 ENSLOCG00000005349 wnt10a (ENSLOCG00000005361) cdk5r2b (ENSLOCG00000017827) ##22 fev (ENSLOCG00000005405) cryba2b (ENSLOCG00000005419) umps (ENSLOCG00000005441) KALRN (ENSLOCG00000005462) ROPN1 (ENSLOCG00000005497) CCDC14 (ENSLOCG00000005512) ENSLOCG00000005529 MYLK (ENSLOCG00000005547) FMNL2 (ENSLOCG00000005582) prpf40a (ENSLOCG00000005629) arl6ip6 (ENSLOCG00000005665) rprmb (ENSLOCG00000017828) GALNT13 (ENSLOCG00000005678) KCNJ3 (ENSLOCG00000005729) nr4a2b (ENSLOCG00000005738) Reedfish MODERN SPECIES 16 THSD7B (ENSECRG00000008604) cxcr4a (ENSECRG00000008578) dars1 (ENSECRG00000008506) mcm6 (ENSECRG00000008463) ENSECRG00000008447 tmbim1a (ENSECRG00000008434) pnkd (ENSECRG00000008405) catip (ENSECRG00000008389) gmppab (ENSECRG00000008367) ENSECRG00000008350 ENSECRG00000008338 asic4a (ENSECRG00000008322) CHPF (ENSECRG00000008307) WNT6 (ENSECRG00000008294) wnt10a (ENSECRG00000008189) cdk5r2b (ENSECRG00000008168) ##22 CCDC14 (ENSECRG00000008148) ENSECRG00000008134 MYLK (ENSECRG00000008099) FMNL2 (ENSECRG00000008021) prpf40a (ENSECRG00000007964) ARL6IP6 (ENSECRG00000007949) rprmb (ENSECRG00000007943) ENSECRG00000007932 GALNT13 (ENSECRG00000007899) KCNJ3 (ENSECRG00000007874) ENSECRG00000007867 nr4a2b (ENSECRG00000007851) gpd2 (ENSECRG00000007817) GALNT5 (ENSECRG00000007795) CYTIP (ENSECRG00000007777) Sarcopterygii ANCESTRAL SPECIES 228 ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000154610.e.a ENSGT00940000158414 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00940000167133 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000156160 ENSGT00390000000862 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182953.A Coelacanth MODERN SPECIES 328 ENSLACG00000017893 ABCB6 (ENSLACG00000017775) USP37 (ENSLACG00000017668) CNOT9 (ENSLACG00000017626) PLCD4 (ENSLACG00000017515) ZNF142 (ENSLACG00000017476) BCS1L (ENSLACG00000017429) CYP27A1 (ENSLACG00000017374) ENSLACG00000017328 WNT6 (ENSLACG00000017115) wnt10a (ENSLACG00000016858) CDK5R2 (ENSLACG00000016481) ##22 TMEM198 (ENSLACG00000015764) OBSL1 (ENSLACG00000015484) INHA (ENSLACG00000015333) gjc4b (ENSLACG00000015229) stk11ip (ENSLACG00000014729) SLC4A3 (ENSLACG00000014086) ENSLACG00000010871 retreg2 (ENSLACG00000010401) IGFBP2 (ENSLACG00000008519) IGFBP5 (ENSLACG00000007215) rpl34 (ENSLACG00000003788) Tetrapoda ANCESTRAL SPECIES 32 ENSGT00530000065055 ENSGT01050000244890.a.b.a ENSGT00940000158887 ENSGT00940000154101.a ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000164719 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00950000183019.f.b.b ENSGT00940000157916 ENSGT00390000000862 ENSGT00940000156160 Amniota ANCESTRAL SPECIES 6 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000164719 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 Sauria ANCESTRAL SPECIES ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Archelosauria ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Emydidae ANCESTRAL SPECIES 4 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a ENSGT00950000183165.b.a ENSGT01090000263048 ENSGT01030000235385.b.a ENSGT00940000160220 ENSGT00940000154095.b.b ENSGT00390000003164 Three-toed box turtle MODERN SPECIES 25 SLC11A1 (ENSTMTG00000002565) VIL1 (ENSTMTG00000002541) ENSTMTG00000002533 USP37 (ENSTMTG00000002474) CNOT9 (ENSTMTG00000002465) PLCD4 (ENSTMTG00000002429) ZNF142 (ENSTMTG00000002420) BCS1L (ENSTMTG00000002414) RNF25 (ENSTMTG00000002407) STK36 (ENSTMTG00000002393) TTLL4 (ENSTMTG00000002381) ENSTMTG00000002369 CYP27A1 (ENSTMTG00000002362) WNT6 (ENSTMTG00000002357) ENSTMTG00000002349 CDK5R2 (ENSTMTG00000002343) ##22 FEV (ENSTMTG00000002340) CFAP65 (ENSTMTG00000002327) ENSTMTG00000002320 NHEJ1 (ENSTMTG00000002315) CNPPD1 (ENSTMTG00000002307) SLC23A3 (ENSTMTG00000002300) ENSTMTG00000002292 ATG9A (ENSTMTG00000002284) ANKZF1 (ENSTMTG00000002275) GLB1L (ENSTMTG00000002266) TUBA4A (ENSTMTG00000002261) ENSTMTG00000002252 PTPRN (ENSTMTG00000002161) painted turtle MODERN SPECIES 1548 CDK5R2 (ENSCPBG00000003738) ##22 FEV (ENSCPBG00000003755) Testudinidae ANCESTRAL SPECIES 8 ENSGT00940000154101.a ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Goode s thornscrub tortoise MODERN SPECIES 2 CATIP (ENSGEVG00005017934) SLC11A1 (ENSGEVG00005018102) CTDSP1 (ENSGEVG00005018850) VIL1 (ENSGEVG00005018920) USP37 (ENSGEVG00005018974) CNOT9 (ENSGEVG00005019017) PLCD4 (ENSGEVG00005019056) ZNF142 (ENSGEVG00005019203) BCS1L (ENSGEVG00005019212) RNF25 (ENSGEVG00005019222) STK36 (ENSGEVG00005019246) TTLL4 (ENSGEVG00005019289) CYP27A1 (ENSGEVG00005019336) WNT6 (ENSGEVG00005019474) WNT10A (ENSGEVG00005019480) CDK5R2 (ENSGEVG00005019485) ##22 FEV (ENSGEVG00005019492) CRYBA2 (ENSGEVG00005019499) CFAP65 (ENSGEVG00005019513) ENSGEVG00005019538 IHH (ENSGEVG00005019548) NHEJ1 (ENSGEVG00005019555) CNPPD1 (ENSGEVG00005019564) ENSGEVG00005009329 ATG9A (ENSGEVG00005009370) ANKZF1 (ENSGEVG00005009434) GLB1L (ENSGEVG00005009632) STK16 (ENSGEVG00005010501) TUBA4A (ENSGEVG00005010530) ENSGEVG00005010550 ENSGEVG00005010576 Abingdon island giant tortoise MODERN SPECIES 2420 ENSCABG00000012901 ENSCABG00000012898 WNT6 (ENSCABG00000012895) WNT10A (ENSCABG00000012892) CDK5R2 (ENSCABG00000012886) ##22 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Aves ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Neognathae ANCESTRAL SPECIES 6 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Golden eagle MODERN SPECIES 22 CTDSP1 (ENSACCG00020001726) VIL1 (ENSACCG00020001336) USP37 (ENSACCG00020001017) CNOT9 (ENSACCG00020000973) PLCD4 (ENSACCG00020000937) ZNF142 (ENSACCG00020000894) BCS1L (ENSACCG00020000859) RNF25 (ENSACCG00020000835) ENSACCG00020000814 ENSACCG00020000793 TTLL4 (ENSACCG00020000754) PRKAG3 (ENSACCG00020000717) CYP27A1 (ENSACCG00020000675) WNT6 (ENSACCG00020000635) WNT10A (ENSACCG00020000606) CDK5R2 (ENSACCG00020000556) ##22 ENSACCG00020000542 CRYBA2 (ENSACCG00020000511) ENSACCG00020000487 CFAP65 (ENSACCG00020000455) ENSACCG00020000407 IHH (ENSACCG00020000390) NHEJ1 (ENSACCG00020000372) CNPPD1 (ENSACCG00020000361) ENSACCG00020000334 ZFAND2B (ENSACCG00020000313) ABCB6 (ENSACCG00020014210) ATG9A (ENSACCG00020013685) ANKZF1 (ENSACCG00020013653) GLB1L (ENSACCG00020013621) STK16 (ENSACCG00020013598) Kakapo MODERN SPECIES 22 VIL1 (ENSSHBG00005012034) USP37 (ENSSHBG00005012063) CNOT9 (ENSSHBG00005012091) PLCD4 (ENSSHBG00005012127) ENSSHBG00005012179 ZNF142 (ENSSHBG00005012200) BCS1L (ENSSHBG00005012242) RNF25 (ENSSHBG00005012291) ENSSHBG00005012316 ENSSHBG00005012338 TTLL4 (ENSSHBG00005012360) PRKAG3 (ENSSHBG00005012380) CYP27A1 (ENSSHBG00005012405) WNT6 (ENSSHBG00005012420) WNT10A (ENSSHBG00005012434) CDK5R2 (ENSSHBG00005012446) ##22 FEV (ENSSHBG00005012458) CRYBA2 (ENSSHBG00005012469) CFAP65 (ENSSHBG00005012510) ENSSHBG00005012563 IHH (ENSSHBG00005012576) NHEJ1 (ENSSHBG00005012587) SLC23A3 (ENSSHBG00005012598) CNPPD1 (ENSSHBG00005012612) ENSSHBG00005012628 ABCB6 (ENSSHBG00005012658) ATG9A (ENSSHBG00005012674) ENSSHBG00005012687 GLB1L (ENSSHBG00005012712) STK16 (ENSSHBG00005012742) ENSSHBG00005012792 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Great tit MODERN SPECIES 27 CTDSP1 (ENSPMJG00000019745) VIL1 (ENSPMJG00000019744) USP37 (ENSPMJG00000019743) CNOT9 (ENSPMJG00000019742) PLCD4 (ENSPMJG00000019741) ZNF142 (ENSPMJG00000019740) BCS1L (ENSPMJG00000019739) RNF25 (ENSPMJG00000019738) ENSPMJG00000019737 ENSPMJG00000019736 TTLL4 (ENSPMJG00000019735) PRKAG3 (ENSPMJG00000019734) CYP27A1 (ENSPMJG00000019733) WNT6 (ENSPMJG00000019732) WNT10A (ENSPMJG00000019731) CDK5R2 (ENSPMJG00000019730) ##22 FEV (ENSPMJG00000019729) CRYBA2 (ENSPMJG00000019728) CFAP65 (ENSPMJG00000019726) ENSPMJG00000019725 IHH (ENSPMJG00000019724) NHEJ1 (ENSPMJG00000019723) ENSPMJG00000019722 SLC23A3 (ENSPMJG00000019721) CNPPD1 (ENSPMJG00000019720) ENSPMJG00000019719 ZFAND2B (ENSPMJG00000019718) ABCB6 (ENSPMJG00000019717) ATG9A (ENSPMJG00000019716) ANKZF1 (ENSPMJG00000019715) GLB1L (ENSPMJG00000019714) Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Medium ground finch MODERN SPECIES 1 SLC11A1 (ENSGFOG00000000632) CTDSP1 (ENSGFOG00000000644) VIL1 (ENSGFOG00000000774) USP37 (ENSGFOG00000002319) CNOT9 (ENSGFOG00000002368) PLCD4 (ENSGFOG00000002408) ZNF142 (ENSGFOG00000002473) BCS1L (ENSGFOG00000002536) RNF25 (ENSGFOG00000002561) ENSGFOG00000002578 TTLL4 (ENSGFOG00000002599) PRKAG3 (ENSGFOG00000002635) CYP27A1 (ENSGFOG00000002744) WNT6 (ENSGFOG00000003972) WNT10A (ENSGFOG00000003984) ENSGFOG00000003993 ##22 FEV (ENSGFOG00000004000) CRYBA2 (ENSGFOG00000004005) CFAP65 (ENSGFOG00000004022) ENSGFOG00000004052 IHH (ENSGFOG00000004061) NHEJ1 (ENSGFOG00000004070) ENSGFOG00000004082 CNPPD1 (ENSGFOG00000004097) ENSGFOG00000004108 ZFAND2B (ENSGFOG00000004121) ABCB6 (ENSGFOG00000004131) ATG9A (ENSGFOG00000004143) ANKZF1 (ENSGFOG00000004160) GLB1L (ENSGFOG00000004178) ENSGFOG00000004230 Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000165272.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Common canary MODERN SPECIES 8 SLC11A1 (ENSSCAG00000012937) CTDSP1 (ENSSCAG00000012952) VIL1 (ENSSCAG00000013018) USP37 (ENSSCAG00000013031) CNOT9 (ENSSCAG00000013041) PLCD4 (ENSSCAG00000013045) ZNF142 (ENSSCAG00000013052) BCS1L (ENSSCAG00000013059) RNF25 (ENSSCAG00000013063) STK36 (ENSSCAG00000013070) TTLL4 (ENSSCAG00000013100) PRKAG3 (ENSSCAG00000013178) CYP27A1 (ENSSCAG00000013191) WNT6 (ENSSCAG00000013214) WNT10A (ENSSCAG00000013224) ENSSCAG00000013228 ##22 ENSSCAG00000013230 CRYBA2 (ENSSCAG00000013238) CFAP65 (ENSSCAG00000013251) ENSSCAG00000013275 IHH (ENSSCAG00000013282) NHEJ1 (ENSSCAG00000013292) CNPPD1 (ENSSCAG00000013298) ENSSCAG00000013309 ZFAND2B (ENSSCAG00000013312) ABCB6 (ENSSCAG00000013361) ATG9A (ENSSCAG00000013482) ANKZF1 (ENSSCAG00000013491) GLB1L (ENSSCAG00000013499) STK16 (ENSSCAG00000013504) ENSSCAG00000013510 Flycatcher MODERN SPECIES 26 SLC11A1 (ENSFALG00000004041) VIL1 (ENSFALG00000004061) USP37 (ENSFALG00000004072) CNOT9 (ENSFALG00000024424) ENSFALG00000004046 PLCD4 (ENSFALG00000004084) ZNF142 (ENSFALG00000004099) BCS1L (ENSFALG00000004106) RNF25 (ENSFALG00000004112) STK36 (ENSFALG00000004118) TTLL4 (ENSFALG00000004135) ENSFALG00000004143 ENSFALG00000004152 WNT6 (ENSFALG00000024670) WNT10A (ENSFALG00000004164) ENSFALG00000028569 ##22 FEV (ENSFALG00000028150) CRYBA2 (ENSFALG00000004167) CFAP65 (ENSFALG00000004169) ENSFALG00000004173 IHH (ENSFALG00000023942) NHEJ1 (ENSFALG00000004177) SLC23A3 (ENSFALG00000004181) CNPPD1 (ENSFALG00000004186) ENSFALG00000025933 ZFAND2B (ENSFALG00000004199) ATG9A (ENSFALG00000004205) ANKZF1 (ENSFALG00000004219) STK16 (ENSFALG00000027114) GLB1L (ENSFALG00000004237) ENSFALG00000000219 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000165272.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Anatidae ANCESTRAL SPECIES ENSGT00390000008812.a ##22 Duck MODERN SPECIES 1094 CDK5R2 (ENSAPLG00000026850) ##22 Phasianidae ANCESTRAL SPECIES 8 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.o ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000161562 ENSGT00390000008812.a ##22 ENSGT00940000165272.a ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Japanese quail MODERN SPECIES 25 CTDSP1 (ENSCJPG00005013092) VIL1 (ENSCJPG00005013096) USP37 (ENSCJPG00005013097) CNOT9 (ENSCJPG00005013098) PLCD4 (ENSCJPG00005013099) ZNF142 (ENSCJPG00005013100) ENSCJPG00005013101 BCS1L (ENSCJPG00005013102) RNF25 (ENSCJPG00005013103) STK36 (ENSCJPG00005013104) TTLL4 (ENSCJPG00005013105) PRKAG3 (ENSCJPG00005013106) CYP27A1 (ENSCJPG00005013107) WNT6 (ENSCJPG00005013108) WNT10A (ENSCJPG00005013109) CDK5R2 (ENSCJPG00005013110) ##22 ENSCJPG00005013111 CRYBA2 (ENSCJPG00005013112) CFAP65 (ENSCJPG00005013114) ENSCJPG00005013115 IHH (ENSCJPG00005013116) NHEJ1 (ENSCJPG00005013117) SLC23A3 (ENSCJPG00005013118) CNPPD1 (ENSCJPG00005013119) ENSCJPG00005013120 ZFAND2B (ENSCJPG00005013121) ABCB6 (ENSCJPG00005013122) ATG9A (ENSCJPG00005013123) ANKZF1 (ENSCJPG00005013124) GLB1L (ENSCJPG00005013125) ENSCJPG00005013277 Phasianidae_b ANCESTRAL SPECIES 8 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.o ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916.a ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000161562 ENSGT00390000008812.a ##22 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000182825.A.a.b.a.b.a.a.a.b Chicken MODERN SPECIES 36 CTDSP1 (ENSGALG00010018986) VIL1 (ENSGALG00010019011) USP37 (ENSGALG00010021193) CNOT9 (ENSGALG00010021663) PLCD4 (ENSGALG00010021634) ZNF142 (ENSGALG00010021626) BCS1L (ENSGALG00010021612) RNF25 (ENSGALG00010021588) STK36 (ENSGALG00010021582) TTLL4 (ENSGALG00010021574) PRKAG3 (ENSGALG00010021564) CYP27A1 (ENSGALG00010021541) WNT6 (ENSGALG00010021142) WNT10A (ENSGALG00010021151) FEV (ENSGALG00010021226) CDK5R2 (ENSGALG00010021205) ##22 CRYBA2 (ENSGALG00010021198) CFAP65 (ENSGALG00010018110) ENSGALG00010018369 IHH (ENSGALG00010021505) NHEJ1 (ENSGALG00010022224) SLC23A3 (ENSGALG00010021501) CNPPD1 (ENSGALG00010021489) ENSGALG00010021480 ZFAND2B (ENSGALG00010021477) ABCB6 (ENSGALG00010021465) ATG9A (ENSGALG00010021444) ANKZF1 (ENSGALG00010021434) GLB1L (ENSGALG00010021421) STK16 (ENSGALG00010021417) TUBA4A (ENSGALG00010022218) Turkey MODERN SPECIES 713 ENSMGAG00000021597 ##22 African ostrich MODERN SPECIES 657 ENSSCUG00000009784 ##22 ENSSCUG00000009785 CFAP65 (ENSSCUG00000009787) NHEJ1 (ENSSCUG00000009791) CNPPD1 (ENSSCUG00000009793) ENSSCUG00000009795 ZFAND2B (ENSSCUG00000009796) ABCB6 (ENSSCUG00000009797) ATG9A (ENSSCUG00000009798) ANKZF1 (ENSSCUG00000009799) GLB1L (ENSSCUG00000009800) ENSSCUG00000009802 ENSSCUG00000009803 ENSSCUG00000009805 ENSSCUG00000009807 ENSSCUG00000009809 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000154095.b.b ENSGT00940000160220 ENSGT00950000182825.A.a.b.b ENSGT00950000183165.a ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375 ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Episquamata ANCESTRAL SPECIES ENSGT00950000182825.A.a.b.b ENSGT00950000183165.a ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00940000154610.e.a ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375 ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Toxicofera ANCESTRAL SPECIES 10 ENSGT00950000182825.A.a.b.a.b.a.a.a.b ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000161420 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00940000154610.e.a ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375 ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Elapidae ANCESTRAL SPECIES ENSGT00950000182825.A.a.b.a.b.a.a.a.b ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000161420 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00940000154610.e.a ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375.m.a ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Indian cobra MODERN SPECIES GLB1L (ENSNNAG00000016292) STK16 (ENSNNAG00000016279) ANKZF1 (ENSNNAG00000016257) ATG9A (ENSNNAG00000016226) ABCB6 (ENSNNAG00000016154) ENSNNAG00000016138 ZFAND2B (ENSNNAG00000016122) TTLL4 (ENSNNAG00000016036) ENSNNAG00000016019 ENSNNAG00000016007 ENSNNAG00000015996 CYP27A1 (ENSNNAG00000015982) WNT6 (ENSNNAG00000015967) WNT10A (ENSNNAG00000015947) ENSNNAG00000015938 CDK5R2 (ENSNNAG00000015929) ##22 FEV (ENSNNAG00000015925) ENSNNAG00000015915 ENSNNAG00000015900 CFAP65 (ENSNNAG00000015695) ENSNNAG00000015659 IHH (ENSNNAG00000015652) NHEJ1 (ENSNNAG00000015640) ENSNNAG00000015544 ENSNNAG00000015476 STK36 (ENSNNAG00000015420) RNF25 (ENSNNAG00000015392) BCS1L (ENSNNAG00000015374) ZNF142 (ENSNNAG00000015347) PLCD4 (ENSNNAG00000015326) CNOT9 (ENSNNAG00000015312) Elapidae_a ANCESTRAL SPECIES 5 ENSGT00940000160220 ENSGT00950000183165.b.a ENSGT00950000182825.A.a.b.a.b.a.a.a.b ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375.m.a ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Acanthophiinae ANCESTRAL SPECIES 7 ENSGT00940000160220 ENSGT00950000183165.b.a ENSGT00950000182825.A.a.b.a.b.a.a.a.b ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375.m.a ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Mainland tiger snake MODERN SPECIES 12 ENSNSUG00000012394 ENSNSUG00000012393 ENSNSUG00000012392 STK16 (ENSNSUG00000012390) GLB1L (ENSNSUG00000012388) ANKZF1 (ENSNSUG00000012385) ATG9A (ENSNSUG00000012383) ABCB6 (ENSNSUG00000012174) ZFAND2B (ENSNSUG00000012172) TTLL4 (ENSNSUG00000012171) ENSNSUG00000012162 CYP27A1 (ENSNSUG00000012160) WNT6 (ENSNSUG00000012159) WNT10A (ENSNSUG00000012158) ENSNSUG00000012157 CDK5R2 (ENSNSUG00000012156) ##22 FEV (ENSNSUG00000012155) CRYBA2 (ENSNSUG00000012153) CFAP65 (ENSNSUG00000012149) ENSNSUG00000012148 IHH (ENSNSUG00000012147) NHEJ1 (ENSNSUG00000012145) SLC23A3 (ENSNSUG00000012142) CNPPD1 (ENSNSUG00000012140) ENSNSUG00000012138 ENSNSUG00000012137 ENSNSUG00000012136 RNF25 (ENSNSUG00000012135) BCS1L (ENSNSUG00000012134) ZNF142 (ENSNSUG00000012133) PLCD4 (ENSNSUG00000012131) Eastern brown snake MODERN SPECIES 37 ENSPTXG00000008731 ENSPTXG00000008730 ENSPTXG00000008728 STK16 (ENSPTXG00000008727) GLB1L (ENSPTXG00000008726) ENSPTXG00000008725 ATG9A (ENSPTXG00000008724) ABCB6 (ENSPTXG00000008723) ZFAND2B (ENSPTXG00000008722) TTLL4 (ENSPTXG00000008721) ENSPTXG00000008719 CYP27A1 (ENSPTXG00000008046) WNT6 (ENSPTXG00000008043) WNT10A (ENSPTXG00000008042) ENSPTXG00000008041 CDK5R2 (ENSPTXG00000008040) ##22 FEV (ENSPTXG00000008038) CRYBA2 (ENSPTXG00000008037) CFAP65 (ENSPTXG00000008036) ENSPTXG00000008035 IHH (ENSPTXG00000008034) NHEJ1 (ENSPTXG00000008033) CNPPD1 (ENSPTXG00000008032) ENSPTXG00000008031 ENSPTXG00000008030 ENSPTXG00000008029 RNF25 (ENSPTXG00000008028) BCS1L (ENSPTXG00000008027) ZNF142 (ENSPTXG00000008026) PLCD4 (ENSPTXG00000008024) CNOT9 (ENSPTXG00000008023) Blue-lipped sea krait MODERN SPECIES 4474 CDK5R2 (ENSLLTG00000013005) ##22 FEV (ENSLLTG00000013000) CRYBA2 (ENSLLTG00000012995) CFAP65 (ENSLLTG00000012878) Lizard MODERN SPECIES GLI2 (ENSACAG00000004133) ENSACAG00000042114 INHBB (ENSACAG00000004094) RALB (ENSACAG00000035328) ENSACAG00000037623 EPB41L5 (ENSACAG00000003907) PTPN4 (ENSACAG00000020944) ENSACAG00000003896 ENSACAG00000044085 TMEM177 (ENSACAG00000003893) ENSACAG00000003841 ENSACAG00000006032 ENSACAG00000036045 ENSACAG00000042925 ENSACAG00000026985 ENSACAG00000005232 ##22 FEV (ENSACAG00000045363) CRYBA2 (ENSACAG00000005219) ENSACAG00000041585 CFAP65 (ENSACAG00000005192) ENSACAG00000005185 IHH (ENSACAG00000035083) NHEJ1 (ENSACAG00000003184) CNPPD1 (ENSACAG00000003074) ENSACAG00000003029 STK36 (ENSACAG00000002906) RNF25 (ENSACAG00000002824) ENSACAG00000042182 ENSACAG00000002813 BCS1L (ENSACAG00000002750) ZNF142 (ENSACAG00000002711) Laterata ANCESTRAL SPECIES 2 ENSGT00950000182825.A.a.b.b ENSGT00950000183165.a ENSGT00550000075037 ENSGT00950000182942.a.b ENSGT00390000005911 ENSGT00390000014839.b ENSGT00940000156160 ENSGT00940000159648 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00940000154610.e.a ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00940000153313.C.a.g.b ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000160059.a.b ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000158375 ENSGT00390000001557 ENSGT00390000005415 ENSGT00940000163074 ENSGT00940000156180 ENSGT00390000001225 Common wall lizard MODERN SPECIES TUBA4A (ENSPMRG00000017419) STK16 (ENSPMRG00000017426) GLB1L (ENSPMRG00000017544) ENSPMRG00000018223 ATG9A (ENSPMRG00000018228) ABCB6 (ENSPMRG00000018352) ZFAND2B (ENSPMRG00000018763) ENSPMRG00000018770 TTLL4 (ENSPMRG00000018791) PRKAG3 (ENSPMRG00000018875) ENSPMRG00000018886 CYP27A1 (ENSPMRG00000018895) WNT6 (ENSPMRG00000018904) WNT10A (ENSPMRG00000018911) ENSPMRG00000018918 CDK5R2 (ENSPMRG00000018924) ##22 FEV (ENSPMRG00000018929) CRYBA2 (ENSPMRG00000018935) CFAP65 (ENSPMRG00000018982) ENSPMRG00000019092 TEX12 (ENSPMRG00000019095) IHH (ENSPMRG00000019097) ENSPMRG00000019100 STK36 (ENSPMRG00000019111) RNF25 (ENSPMRG00000019124) BCS1L (ENSPMRG00000019126) ZNF142 (ENSPMRG00000019149) PLCD4 (ENSPMRG00000019242) CNOT9 (ENSPMRG00000019254) USP37 (ENSPMRG00000019266) VIL1 (ENSPMRG00000019290) Argentine black and white tegu MODERN SPECIES 27 ENSSMRG00000010981 ENSSMRG00000010989 STK16 (ENSSMRG00000010993) GLB1L (ENSSMRG00000010997) ANKZF1 (ENSSMRG00000010999) ATG9A (ENSSMRG00000011058) ABCB6 (ENSSMRG00000011060) ZFAND2B (ENSSMRG00000011062) TTLL4 (ENSSMRG00000011158) ENSSMRG00000011168 ENSSMRG00000011176 CYP27A1 (ENSSMRG00000011179) WNT6 (ENSSMRG00000011181) WNT10A (ENSSMRG00000011184) ENSSMRG00000011189 CDK5R2 (ENSSMRG00000011191) ##22 FEV (ENSSMRG00000011194) CRYBA2 (ENSSMRG00000011195) CFAP65 (ENSSMRG00000011232) ENSSMRG00000011242 IHH (ENSSMRG00000011251) NHEJ1 (ENSSMRG00000011260) SLC23A3 (ENSSMRG00000011273) CNPPD1 (ENSSMRG00000011276) ENSSMRG00000011279 STK36 (ENSSMRG00000011282) RNF25 (ENSSMRG00000011285) ENSSMRG00000011288 BCS1L (ENSSMRG00000011289) ZNF142 (ENSSMRG00000011290) PLCD4 (ENSSMRG00000011291) tuatara MODERN SPECIES 1842 ENSSPUG00000015264 STK16 (ENSSPUG00000015274) GLB1L (ENSSPUG00000015303) ENSSPUG00000015386 ATG9A (ENSSPUG00000015399) ABCB6 (ENSSPUG00000015447) ENSSPUG00000015474 TTLL4 (ENSSPUG00000015501) PRKAG3 (ENSSPUG00000015530) CYP27A1 (ENSSPUG00000015557) WNT6 (ENSSPUG00000015572) WNT10A (ENSSPUG00000015583) CDK5R2 (ENSSPUG00000015590) ##22 FEV (ENSSPUG00000015600) Mammalia ANCESTRAL SPECIES 59 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000183019.f.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Theria ANCESTRAL SPECIES 5 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Opossum MODERN SPECIES 6 SLC11A1 (ENSMODG00000015482) CTDSP1 (ENSMODG00000015431) VIL1 (ENSMODG00000015428) USP37 (ENSMODG00000015421) CNOT9 (ENSMODG00000015414) PLCD4 (ENSMODG00000015407) ENSMODG00000015404 BCS1L (ENSMODG00000015401) RNF25 (ENSMODG00000015397) STK36 (ENSMODG00000015388) TTLL4 (ENSMODG00000015375) CYP27A1 (ENSMODG00000015372) PRKAG3 (ENSMODG00000015369) WNT6 (ENSMODG00000015364) WNT10A (ENSMODG00000015361) CDK5R2 (ENSMODG00000015359) ##22 FEV (ENSMODG00000015354) ENSMODG00000043122 ENSMODG00000015348 ENSMODG00000027686 IHH (ENSMODG00000015339) NHEJ1 (ENSMODG00000015338) SLC23A3 (ENSMODG00000015334) CNPPD1 (ENSMODG00000015328) ENSMODG00000015322 ZFAND2B (ENSMODG00000015318) ABCB6 (ENSMODG00000015313) ATG9A (ENSMODG00000015302) ANKZF1 (ENSMODG00000015285) GLB1L (ENSMODG00000015276) STK16 (ENSMODG00000015267) Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Diprotodontia ANCESTRAL SPECIES 31 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Diprotodontia_a ANCESTRAL SPECIES 30 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a koala MODERN SPECIES 98 SLC11A1 (ENSPCIG00000020020) CTDSP1 (ENSPCIG00000020018) VIL1 (ENSPCIG00000016393) USP37 (ENSPCIG00000016291) CNOT9 (ENSPCIG00000016288) PLCD4 (ENSPCIG00000016135) ZNF142 (ENSPCIG00000016134) BCS1L (ENSPCIG00000016133) RNF25 (ENSPCIG00000016131) STK36 (ENSPCIG00000016130) TTLL4 (ENSPCIG00000016128) CYP27A1 (ENSPCIG00000016125) PRKAG3 (ENSPCIG00000011214) WNT6 (ENSPCIG00000011120) WNT10A (ENSPCIG00000011118) CDK5R2 (ENSPCIG00000011115) ##22 FEV (ENSPCIG00000011110) CRYBA2 (ENSPCIG00000011108) ENSPCIG00000011100 IHH (ENSPCIG00000011095) NHEJ1 (ENSPCIG00000010341) SLC23A3 (ENSPCIG00000010339) CNPPD1 (ENSPCIG00000010338) RETREG2 (ENSPCIG00000036139) ZFAND2B (ENSPCIG00000010335) ABCB6 (ENSPCIG00000010333) ATG9A (ENSPCIG00000010329) ANKZF1 (ENSPCIG00000010326) GLB1L (ENSPCIG00000010323) STK16 (ENSPCIG00000010320) TUBA4A (ENSPCIG00000027433) Common wonbat MODERN SPECIES 1038 CTDSP1 (ENSVURG00010002333) VIL1 (ENSVURG00010002297) ENSVURG00010002271 ENSVURG00010002258 PLCD4 (ENSVURG00010002213) ENSVURG00010002205 ENSVURG00010002199 BCS1L (ENSVURG00010002183) RNF25 (ENSVURG00010002169) STK36 (ENSVURG00010002099) TTLL4 (ENSVURG00010002059) CYP27A1 (ENSVURG00010002012) PRKAG3 (ENSVURG00010001986) WNT6 (ENSVURG00010001977) WNT10A (ENSVURG00010001964) CDK5R2 (ENSVURG00010001957) ##22 FEV (ENSVURG00010001943) CRYBA2 (ENSVURG00010001924) CFAP65 (ENSVURG00010001685) IHH (ENSVURG00010001611) NHEJ1 (ENSVURG00010001601) ENSVURG00010001586 CNPPD1 (ENSVURG00010001578) ENSVURG00010001544 ZFAND2B (ENSVURG00010001521) ABCB6 (ENSVURG00010000405) ATG9A (ENSVURG00010000291) ANKZF1 (ENSVURG00010000261) GLB1L (ENSVURG00010000208) STK16 (ENSVURG00010000180) ENSVURG00010000160 Tasmanian devil MODERN SPECIES 2 CATIP (ENSSHAG00000014194) SLC11A1 (ENSSHAG00000016221) CTDSP1 (ENSSHAG00000031744) VIL1 (ENSSHAG00000016062) USP37 (ENSSHAG00000015902) CNOT9 (ENSSHAG00000015824) PLCD4 (ENSSHAG00000015736) BCS1L (ENSSHAG00000015660) ZNF142 (ENSSHAG00000015673) STK36 (ENSSHAG00000015575) TTLL4 (ENSSHAG00000015496) PRKAG3 (ENSSHAG00000015219) ENSSHAG00000029676 WNT6 (ENSSHAG00000030441) WNT10A (ENSSHAG00000028653) CDK5R2 (ENSSHAG00000021399) ##22 FEV (ENSSHAG00000029082) CRYBA2 (ENSSHAG00000014707) CFAP65 (ENSSHAG00000014437) IHH (ENSSHAG00000014306) SLC23A3 (ENSSHAG00000013697) CNPPD1 (ENSSHAG00000025834) ENSSHAG00000028935 ZFAND2B (ENSSHAG00000013549) ANKZF1 (ENSSHAG00000013460) ENSSHAG00000013486 STK16 (ENSSHAG00000013407) ENSSHAG00000025481 ENSSHAG00000013304 ENSSHAG00000027372 PTPRN (ENSSHAG00000013131) Eutheria ANCESTRAL SPECIES 10 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Glires ANCESTRAL SPECIES 14 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Rodentia_B ANCESTRAL SPECIES 12 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Kangaroo rat MODERN SPECIES 320 Ctdsp1 (ENSDORG00000028537) Vil1 (ENSDORG00000014838) Usp37 (ENSDORG00000014842) Cnot9 (ENSDORG00000029243) Plcd4 (ENSDORG00000004704) ENSDORG00000004707 Bcs1l (ENSDORG00000004709) ENSDORG00000004710 ENSDORG00000023301 ENSDORG00000028722 Ttll4 (ENSDORG00000008314) Cyp27a1 (ENSDORG00000014138) Prkag3 (ENSDORG00000025509) Wnt6 (ENSDORG00000005721) Wnt10a (ENSDORG00000005722) ENSDORG00000024930 ##22 Cryba2 (ENSDORG00000002775) Cfap65 (ENSDORG00000002777) Ihh (ENSDORG00000008874) Nhej1 (ENSDORG00000008876) Slc23a3 (ENSDORG00000008878) Cnppd1 (ENSDORG00000030060) Retreg2 (ENSDORG00000008882) Zfand2b (ENSDORG00000000133) Abcb6 (ENSDORG00000000140) Atg9a (ENSDORG00000000146) Ankzf1 (ENSDORG00000000149) ENSDORG00000000150 Stk16 (ENSDORG00000000152) Tuba4a (ENSDORG00000027321) ENSDORG00000000154 Myomorpha ANCESTRAL SPECIES 10 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Lesser Egyptian jerboa MODERN SPECIES 95 ENSJJAG00000000751 Slc11a1 (ENSJJAG00000018654) Vil1 (ENSJJAG00000017015) Usp37 (ENSJJAG00000012891) ENSJJAG00000001130 Plcd4 (ENSJJAG00000015778) Zfp142 (ENSJJAG00000021558) Bcs1l (ENSJJAG00000015901) ENSJJAG00000015098 ENSJJAG00000011828 ENSJJAG00000022770 Ttll4 (ENSJJAG00000022044) Cyp27a1 (ENSJJAG00000016498) Wnt6 (ENSJJAG00000020656) Wnt10a (ENSJJAG00000019142) ENSJJAG00000018657 ##22 Fev (ENSJJAG00000014165) Cryba2 (ENSJJAG00000012188) Cfap65 (ENSJJAG00000021817) Ihh (ENSJJAG00000005159) ENSJJAG00000021485 Slc23a3 (ENSJJAG00000014948) Cnppd1 (ENSJJAG00000019086) Retreg2 (ENSJJAG00000020986) Zfand2b (ENSJJAG00000018956) Abcb6 (ENSJJAG00000021206) Atg9a (ENSJJAG00000010073) Ankzf1 (ENSJJAG00000015085) Glb1l (ENSJJAG00000000273) Stk16 (ENSJJAG00000014287) Tuba4a (ENSJJAG00000011005) Muroidea ANCESTRAL SPECIES 20 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Upper Galilee mountains blind mole rat MODERN SPECIES 1887 Ctdsp1 (ENSNGAG00000008784) Vil1 (ENSNGAG00000007441) Usp37 (ENSNGAG00000021253) Cnot9 (ENSNGAG00000013140) Plcd4 (ENSNGAG00000023913) ENSNGAG00000023768 Bcs1l (ENSNGAG00000019095) ENSNGAG00000023854 ENSNGAG00000016725 ENSNGAG00000013118 Ttll4 (ENSNGAG00000020292) Cyp27a1 (ENSNGAG00000023395) Prkag3 (ENSNGAG00000007920) Wnt6 (ENSNGAG00000021793) Wnt10a (ENSNGAG00000024234) Cdk5r2 (ENSNGAG00000001353) ##22 Fev (ENSNGAG00000022934) Cryba2 (ENSNGAG00000006988) ENSNGAG00000001188 ENSNGAG00000005830 Ihh (ENSNGAG00000023757) Nhej1 (ENSNGAG00000000943) Slc23a3 (ENSNGAG00000005244) ENSNGAG00000015911 Retreg2 (ENSNGAG00000017958) Zfand2b (ENSNGAG00000022561) Abcb6 (ENSNGAG00000014016) Atg9a (ENSNGAG00000012136) Ankzf1 (ENSNGAG00000023378) Glb1l (ENSNGAG00000013262) Stk16 (ENSNGAG00000023432) Muroidea_A ANCESTRAL SPECIES 19 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Murinae ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mus ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mus_A ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mus_B ANCESTRAL SPECIES 7 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mus_C ANCESTRAL SPECIES 1 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Steppe mouse MODERN SPECIES 3423 Slc11a1 (ENSMSIG00000019682) ENSMSIG00000019634 Vil1 (ENSMSIG00000019586) Cnot9 (ENSMSIG00000019555) Usp37 (ENSMSIG00000019436) Plcd4 (ENSMSIG00000019245) Zfp142 (ENSMSIG00000019187) Bcs1l (ENSMSIG00000019168) Rnf25 (ENSMSIG00000019133) Stk36 (ENSMSIG00000018889) Ttll4 (ENSMSIG00000018759) Prkag3 (ENSMSIG00000018678) Cyp27a1 (ENSMSIG00000018644) Wnt6 (ENSMSIG00000018613) Wnt10a (ENSMSIG00000018596) Cdk5r2 (ENSMSIG00000018589) ##22 Fev (ENSMSIG00000018578) Cryba2 (ENSMSIG00000018560) Cfap65 (ENSMSIG00000018515) Ihh (ENSMSIG00000018493) Nhej1 (ENSMSIG00000018428) Slc23a3 (ENSMSIG00000018400) Cnppd1 (ENSMSIG00000018370) ENSMSIG00000018356 Zfand2b (ENSMSIG00000018332) Abcb6 (ENSMSIG00000018307) Atg9a (ENSMSIG00000018273) Ankzf1 (ENSMSIG00000018229) Glb1l (ENSMSIG00000018199) Stk16 (ENSMSIG00000018185) Tuba4a (ENSMSIG00000018170) spretus MODERN SPECIES Slc11a1 (MGP_SPRETEiJ_G0015067) Ctdsp1 (MGP_SPRETEiJ_G0015068) Vil1 (MGP_SPRETEiJ_G0015069) Usp37 (MGP_SPRETEiJ_G0015070) Cnot9 (MGP_SPRETEiJ_G0015071) Plcd4 (MGP_SPRETEiJ_G0015072) Zfp142 (MGP_SPRETEiJ_G0015073) Bcs1l (MGP_SPRETEiJ_G0015074) Rnf25 (MGP_SPRETEiJ_G0015075) Stk36 (MGP_SPRETEiJ_G0015076) Ttll4 (MGP_SPRETEiJ_G0015077) Cyp27a1 (MGP_SPRETEiJ_G0015078) Prkag3 (MGP_SPRETEiJ_G0015079) Wnt6 (MGP_SPRETEiJ_G0015080) Wnt10a (MGP_SPRETEiJ_G0015081) Cdk5r2 (MGP_SPRETEiJ_G0015082) ##22 Fev (MGP_SPRETEiJ_G0015083) Cryba2 (MGP_SPRETEiJ_G0015084) Cfap65 (MGP_SPRETEiJ_G0015085) Ihh (MGP_SPRETEiJ_G0015086) MGP_SPRETEiJ_G0015087 Slc23a3 (MGP_SPRETEiJ_G0015088) Cnppd1 (MGP_SPRETEiJ_G0015089) Retreg2 (MGP_SPRETEiJ_G0015090) Zfand2b (MGP_SPRETEiJ_G0015091) Abcb6 (MGP_SPRETEiJ_G0015092) Atg9a (MGP_SPRETEiJ_G0015093) Ankzf1 (MGP_SPRETEiJ_G0015094) Glb1l (MGP_SPRETEiJ_G0015095) Stk16 (MGP_SPRETEiJ_G0015096) Tuba4a (MGP_SPRETEiJ_G0015097) Mouse MODERN SPECIES Slc11a1 (ENSMUSG00000026177) Ctdsp1 (ENSMUSG00000026176) Vil1 (ENSMUSG00000026175) Usp37 (ENSMUSG00000033364) Cnot9 (ENSMUSG00000026174) Plcd4 (ENSMUSG00000026173) Zfp142 (ENSMUSG00000026135) Bcs1l (ENSMUSG00000026172) Rnf25 (ENSMUSG00000026171) Stk36 (ENSMUSG00000033276) Ttll4 (ENSMUSG00000033257) Cyp27a1 (ENSMUSG00000026170) Prkag3 (ENSMUSG00000006542) Wnt6 (ENSMUSG00000033227) Wnt10a (ENSMUSG00000026167) Cdk5r2 (ENSMUSG00000090071) ##22 Fev (ENSMUSG00000055197) Cryba2 (ENSMUSG00000006546) Cfap65 (ENSMUSG00000047021) Ihh (ENSMUSG00000006538) Nhej1 (ENSMUSG00000026162) Slc23a3 (ENSMUSG00000026205) Cnppd1 (ENSMUSG00000033159) Retreg2 (ENSMUSG00000049339) Zfand2b (ENSMUSG00000026197) Abcb6 (ENSMUSG00000026198) Atg9a (ENSMUSG00000033124) Ankzf1 (ENSMUSG00000026199) Glb1l (ENSMUSG00000026200) Stk16 (ENSMUSG00000026201) Tuba4a (ENSMUSG00000026202) Ryukyu mouse MODERN SPECIES Slc11a1 (MGP_CAROLIEiJ_G0014261) Ctdsp1 (MGP_CAROLIEiJ_G0014262) Vil1 (MGP_CAROLIEiJ_G0014263) Usp37 (MGP_CAROLIEiJ_G0014264) Cnot9 (MGP_CAROLIEiJ_G0014265) Plcd4 (MGP_CAROLIEiJ_G0014266) Zfp142 (MGP_CAROLIEiJ_G0014267) Bcs1l (MGP_CAROLIEiJ_G0014268) Rnf25 (MGP_CAROLIEiJ_G0014269) Stk36 (MGP_CAROLIEiJ_G0014270) Ttll4 (MGP_CAROLIEiJ_G0014271) Cyp27a1 (MGP_CAROLIEiJ_G0014272) Prkag3 (MGP_CAROLIEiJ_G0014273) Wnt6 (MGP_CAROLIEiJ_G0014274) Wnt10a (MGP_CAROLIEiJ_G0014275) Cdk5r2 (MGP_CAROLIEiJ_G0014276) ##22 Fev (MGP_CAROLIEiJ_G0014277) Cryba2 (MGP_CAROLIEiJ_G0014278) Cfap65 (MGP_CAROLIEiJ_G0014279) Ihh (MGP_CAROLIEiJ_G0014280) MGP_CAROLIEiJ_G0014281 Slc23a3 (MGP_CAROLIEiJ_G0014282) Cnppd1 (MGP_CAROLIEiJ_G0014283) Retreg2 (MGP_CAROLIEiJ_G0014284) Zfand2b (MGP_CAROLIEiJ_G0014285) Abcb6 (MGP_CAROLIEiJ_G0014286) Atg9a (MGP_CAROLIEiJ_G0014287) Ankzf1 (MGP_CAROLIEiJ_G0014288) Glb1l (MGP_CAROLIEiJ_G0014289) Stk16 (MGP_CAROLIEiJ_G0014290) Tuba4a (MGP_CAROLIEiJ_G0014291) Shrew mouse MODERN SPECIES 18 Slc11a1 (MGP_PahariEiJ_G0027499) Ctdsp1 (MGP_PahariEiJ_G0027500) Vil1 (MGP_PahariEiJ_G0027501) Usp37 (MGP_PahariEiJ_G0027502) Cnot9 (MGP_PahariEiJ_G0027503) Plcd4 (MGP_PahariEiJ_G0027504) Zfp142 (MGP_PahariEiJ_G0027505) Bcs1l (MGP_PahariEiJ_G0027506) Rnf25 (MGP_PahariEiJ_G0027507) Stk36 (MGP_PahariEiJ_G0027508) Ttll4 (MGP_PahariEiJ_G0027509) Cyp27a1 (MGP_PahariEiJ_G0027510) Prkag3 (MGP_PahariEiJ_G0027511) Wnt6 (MGP_PahariEiJ_G0027512) Wnt10a (MGP_PahariEiJ_G0027513) Cdk5r2 (MGP_PahariEiJ_G0027514) ##22 Fev (MGP_PahariEiJ_G0027515) Cryba2 (MGP_PahariEiJ_G0027516) Cfap65 (MGP_PahariEiJ_G0027517) Ihh (MGP_PahariEiJ_G0027518) MGP_PahariEiJ_G0027519 Slc23a3 (MGP_PahariEiJ_G0027520) Cnppd1 (MGP_PahariEiJ_G0027521) Retreg2 (MGP_PahariEiJ_G0027522) Zfand2b (MGP_PahariEiJ_G0027523) Abcb6 (MGP_PahariEiJ_G0027524) Atg9a (MGP_PahariEiJ_G0027525) Ankzf1 (MGP_PahariEiJ_G0027526) Glb1l (MGP_PahariEiJ_G0027527) Stk16 (MGP_PahariEiJ_G0027528) Tuba4a (MGP_PahariEiJ_G0027529) Rat MODERN SPECIES 19 Vil1 (ENSRNOG00000015408) Usp37 (ENSRNOG00000022720) Cnot9 (ENSRNOG00000016034) Plcd4 (ENSRNOG00000016361) Zfp142 (ENSRNOG00000022414) Bcs1l (ENSRNOG00000016754) Rnf25 (ENSRNOG00000016886) Stk36 (ENSRNOG00000016913) Ttll4 (ENSRNOG00000017129) Cyp27a1 (ENSRNOG00000017188) Prkag3 (ENSRNOG00000017248) ENSRNOG00000067128 Wnt6 (ENSRNOG00000017409) Wnt10a (ENSRNOG00000052510) AC132020.1 (ENSRNOG00000017757) Cdk5r2 (ENSRNOG00000037793) ##22 Fev (ENSRNOG00000017856) Cryba2 (ENSRNOG00000017996) Cfap65 (ENSRNOG00000056996) Ihh (ENSRNOG00000018059) Nhej1 (ENSRNOG00000018162) AABR07068084.1 (ENSRNOG00000032518) Slc23a3 (ENSRNOG00000018266) Cnppd1 (ENSRNOG00000018325) Retreg2 (ENSRNOG00000018586) Zfand2b (ENSRNOG00000018639) Abcb6 (ENSRNOG00000018697) Atg9a (ENSRNOG00000018975) Ankzf1 (ENSRNOG00000019052) Glb1l (ENSRNOG00000019243) Stk16 (ENSRNOG00000019294) Cricetidae ANCESTRAL SPECIES 19 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Cricetinae ANCESTRAL SPECIES 3 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Chinese hamster chok1gshd MODERN SPECIES 1 Slc11a1 (ENSCGRG00001020070) Ctdsp1 (ENSCGRG00001020131) Vil1 (ENSCGRG00001022375) Usp37 (ENSCGRG00001020814) Cnot9 (ENSCGRG00001006914) Plcd4 (ENSCGRG00001019995) ENSCGRG00001020944 Bcs1l (ENSCGRG00001022549) Rnf25 (ENSCGRG00001019945) Stk36 (ENSCGRG00001021047) Ttll4 (ENSCGRG00001020353) Cyp27a1 (ENSCGRG00001022449) Prkag3 (ENSCGRG00001023244) Wnt6 (ENSCGRG00001020412) Wnt10a (ENSCGRG00001021957) Cdk5r2 (ENSCGRG00001010890) ##22 Fev (ENSCGRG00001022388) Cryba2 (ENSCGRG00001020857) Cfap65 (ENSCGRG00001021271) Ihh (ENSCGRG00001004911) Nhej1 (ENSCGRG00001020270) Slc23a3 (ENSCGRG00001021979) Cnppd1 (ENSCGRG00001021884) Retreg2 (ENSCGRG00001020316) Zfand2b (ENSCGRG00001023088) Abcb6 (ENSCGRG00001021485) Atg9a (ENSCGRG00001020609) Ankzf1 (ENSCGRG00001003325) Glb1l (ENSCGRG00001022575) Stk16 (ENSCGRG00001023098) ENSCGRG00001024425 Golden Hamster MODERN SPECIES 640 Ctdsp1 (ENSMAUG00000004766) Vil1 (ENSMAUG00000001066) Usp37 (ENSMAUG00000020807) Cnot9 (ENSMAUG00000000762) Plcd4 (ENSMAUG00000001125) ENSMAUG00000016846 Bcs1l (ENSMAUG00000016355) ENSMAUG00000019636 ENSMAUG00000009866 ENSMAUG00000018220 Ttll4 (ENSMAUG00000013354) Cyp27a1 (ENSMAUG00000012139) Prkag3 (ENSMAUG00000009130) Wnt6 (ENSMAUG00000001585) Wnt10a (ENSMAUG00000002340) Cdk5r2 (ENSMAUG00000008653) ##22 Fev (ENSMAUG00000007309) Cryba2 (ENSMAUG00000009795) Cfap65 (ENSMAUG00000014580) Ihh (ENSMAUG00000014723) Nhej1 (ENSMAUG00000021394) Slc23a3 (ENSMAUG00000012279) ENSMAUG00000016029 Retreg2 (ENSMAUG00000001382) ENSMAUG00000015584 Atg9a (ENSMAUG00000021504) Glb1l (ENSMAUG00000016945) Stk16 (ENSMAUG00000020739) Tuba4a (ENSMAUG00000010899) Dnajb2 (ENSMAUG00000018185) ENSMAUG00000019028 Cricetidae_B ANCESTRAL SPECIES 20 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00930000151420 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT01040000242059 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Northern American deer mouse MODERN SPECIES 4 Slc11a1 (ENSPEMG00000000568) Ctdsp1 (ENSPEMG00000025369) Vil1 (ENSPEMG00000012484) Usp37 (ENSPEMG00000002989) Cnot9 (ENSPEMG00000014045) Plcd4 (ENSPEMG00000016923) Zfp142 (ENSPEMG00000000784) Bcs1l (ENSPEMG00000009977) Rnf25 (ENSPEMG00000013432) Stk36 (ENSPEMG00000025017) Ttll4 (ENSPEMG00000015183) Cyp27a1 (ENSPEMG00000016775) Prkag3 (ENSPEMG00000015508) Wnt6 (ENSPEMG00000013371) Wnt10a (ENSPEMG00000026915) ENSPEMG00000026703 ##22 Fev (ENSPEMG00000030849) Cryba2 (ENSPEMG00000012049) Cfap65 (ENSPEMG00000000225) Ihh (ENSPEMG00000029231) ENSPEMG00000013096 ENSPEMG00000030620 Slc23a3 (ENSPEMG00000005189) Cnppd1 (ENSPEMG00000020339) Retreg2 (ENSPEMG00000010062) Zfand2b (ENSPEMG00000030469) Abcb6 (ENSPEMG00000009632) Atg9a (ENSPEMG00000013285) Ankzf1 (ENSPEMG00000014818) Glb1l (ENSPEMG00000017889) Stk16 (ENSPEMG00000018725) Prairie vole MODERN SPECIES 354 Ctdsp1 (ENSMOCG00000018253) Vil1 (ENSMOCG00000018545) Usp37 (ENSMOCG00000002015) Cnot9 (ENSMOCG00000014736) Plcd4 (ENSMOCG00000007617) ENSMOCG00000009252 Bcs1l (ENSMOCG00000021587) ENSMOCG00000020374 ENSMOCG00000021552 ENSMOCG00000014792 Ttll4 (ENSMOCG00000022947) Cyp27a1 (ENSMOCG00000022721) Prkag3 (ENSMOCG00000002259) Wnt6 (ENSMOCG00000017824) Wnt10a (ENSMOCG00000019338) Cdk5r2 (ENSMOCG00000001322) ##22 Fev (ENSMOCG00000007062) Cryba2 (ENSMOCG00000002053) Cfap65 (ENSMOCG00000019421) Ihh (ENSMOCG00000002358) Nhej1 (ENSMOCG00000020976) Slc23a3 (ENSMOCG00000019126) Cnppd1 (ENSMOCG00000017920) Retreg2 (ENSMOCG00000016481) Zfand2b (ENSMOCG00000001276) ENSMOCG00000021361 Atg9a (ENSMOCG00000013127) Ankzf1 (ENSMOCG00000006514) Glb1l (ENSMOCG00000014084) Stk16 (ENSMOCG00000017649) Tuba4a (ENSMOCG00000013079) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Marmotini ANCESTRAL SPECIES 2 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Marmotini_b ANCESTRAL SPECIES 71 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Squirrel MODERN SPECIES 169 CTDSP1 (ENSSTOG00000008434) VIL1 (ENSSTOG00000026327) USP37 (ENSSTOG00000014934) CNOT9 (ENSSTOG00000014954) PLCD4 (ENSSTOG00000006406) ENSSTOG00000020993 BCS1L (ENSSTOG00000006465) RNF25 (ENSSTOG00000006486) STK36 (ENSSTOG00000006509) TTLL4 (ENSSTOG00000006562) CYP27A1 (ENSSTOG00000006612) PRKAG3 (ENSSTOG00000006628) WNT6 (ENSSTOG00000006654) WNT10A (ENSSTOG00000026725) ENSSTOG00000022853 CDK5R2 (ENSSTOG00000025038) ##22 FEV (ENSSTOG00000020252) CRYBA2 (ENSSTOG00000009326) ENSSTOG00000009331 IHH (ENSSTOG00000027440) NHEJ1 (ENSSTOG00000022820) SLC23A3 (ENSSTOG00000009384) CNPPD1 (ENSSTOG00000009401) RETREG2 (ENSSTOG00000025849) ZFAND2B (ENSSTOG00000011063) ABCB6 (ENSSTOG00000011066) ATG9A (ENSSTOG00000023078) ENSSTOG00000030606 GLB1L (ENSSTOG00000011089) ENSSTOG00000011083 STK16 (ENSSTOG00000025197) Arctic ground squirrel MODERN SPECIES 76 SLC11A1 (ENSUPAG00010011835) CTDSP1 (ENSUPAG00010011867) VIL1 (ENSUPAG00010012061) USP37 (ENSUPAG00010012094) CNOT9 (ENSUPAG00010012221) PLCD4 (ENSUPAG00010012230) ENSUPAG00010012261 BCS1L (ENSUPAG00010012288) RNF25 (ENSUPAG00010012304) STK36 (ENSUPAG00010012312) TTLL4 (ENSUPAG00010012373) CYP27A1 (ENSUPAG00010012425) PRKAG3 (ENSUPAG00010012438) WNT6 (ENSUPAG00010012502) WNT10A (ENSUPAG00010012507) CDK5R2 (ENSUPAG00010012510) ##22 FEV (ENSUPAG00010012515) CRYBA2 (ENSUPAG00010012524) CFAP65 (ENSUPAG00010012541) IHH (ENSUPAG00010012634) NHEJ1 (ENSUPAG00010012641) SLC23A3 (ENSUPAG00010012663) CNPPD1 (ENSUPAG00010012676) ENSUPAG00010012690 ZFAND2B (ENSUPAG00010012706) ABCB6 (ENSUPAG00010012726) ATG9A (ENSUPAG00010012767) ANKZF1 (ENSUPAG00010012803) GLB1L (ENSUPAG00010012811) STK16 (ENSUPAG00010012826) TUBA4A (ENSUPAG00010012836) Eurasian red squirrel MODERN SPECIES 12 CTDSP1 (ENSSVLG00005011687) VIL1 (ENSSVLG00005011808) USP37 (ENSSVLG00005012174) CNOT9 (ENSSVLG00005012291) PLCD4 (ENSSVLG00005012386) ENSSVLG00005012744 BCS1L (ENSSVLG00005012862) RNF25 (ENSSVLG00005012906) STK36 (ENSSVLG00005012970) TTLL4 (ENSSVLG00005013389) ENSSVLG00005013536 CYP27A1 (ENSSVLG00005013581) PRKAG3 (ENSSVLG00005013746) WNT6 (ENSSVLG00005013835) WNT10A (ENSSVLG00005013864) CDK5R2 (ENSSVLG00005013909) ##22 FEV (ENSSVLG00005013940) CRYBA2 (ENSSVLG00005014007) CFAP65 (ENSSVLG00005014142) IHH (ENSSVLG00005014629) NHEJ1 (ENSSVLG00005014689) ENSSVLG00005014735 SLC23A3 (ENSSVLG00005014807) CNPPD1 (ENSSVLG00005015098) ENSSVLG00005015144 ZFAND2B (ENSSVLG00005015187) ABCB6 (ENSSVLG00005015299) ATG9A (ENSSVLG00005015521) ANKZF1 (ENSSVLG00005015600) GLB1L (ENSSVLG00005015724) STK16 (ENSSVLG00005015849) Hystricomorpha ANCESTRAL SPECIES 28 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916.c ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Naked mole-rat female MODERN SPECIES 17 USP37 (ENSHGLG00000013897) CNOT9 (ENSHGLG00000016743) PLCD4 (ENSHGLG00000008143) ENSHGLG00000010262 BCS1L (ENSHGLG00000008703) RNF25 (ENSHGLG00000007383) STK36 (ENSHGLG00000016143) TTLL4 (ENSHGLG00000015642) ENSHGLG00000012335 CYP27A1 (ENSHGLG00000013105) ENSHGLG00000042292 PRKAG3 (ENSHGLG00000018906) WNT6 (ENSHGLG00000008425) WNT10A (ENSHGLG00000006038) ENSHGLG00000042473 CDK5R2 (ENSHGLG00000020594) ##22 FEV (ENSHGLG00000049169) ENSHGLG00000017973 CFAP65 (ENSHGLG00000015698) IHH (ENSHGLG00000037115) NHEJ1 (ENSHGLG00000018120) SLC23A3 (ENSHGLG00000015164) CNPPD1 (ENSHGLG00000017860) RETREG2 (ENSHGLG00000012620) ZFAND2B (ENSHGLG00000017806) ABCB6 (ENSHGLG00000018842) ANKZF1 (ENSHGLG00000019538) ATG9A (ENSHGLG00000014975) GLB1L (ENSHGLG00000017098) STK16 (ENSHGLG00000042503) TUBA4A (ENSHGLG00000010691) Hystricomorpha_a ANCESTRAL SPECIES 32 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916.c ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Guinea pig MODERN SPECIES 89 USP37 (ENSCPOG00000015117) CNOT9 (ENSCPOG00000038715) PLCD4 (ENSCPOG00000015123) ENSCPOG00000002539 BCS1L (ENSCPOG00000002544) ENSCPOG00000002546 STK36 (ENSCPOG00000002553) TTLL4 (ENSCPOG00000002562) CYP27A1 (ENSCPOG00000001403) PRKAG3 (ENSCPOG00000025222) WNT6 (ENSCPOG00000031683) WNT10A (ENSCPOG00000036720) ENSCPOG00000031234 ##22 FEV (ENSCPOG00000021229) CRYBA2 (ENSCPOG00000009130) CFAP65 (ENSCPOG00000015251) IHH (ENSCPOG00000031896) NHEJ1 (ENSCPOG00000023981) SLC23A3 (ENSCPOG00000009623) CNPPD1 (ENSCPOG00000037547) RETREG2 (ENSCPOG00000004582) ZFAND2B (ENSCPOG00000004584) ABCB6 (ENSCPOG00000004587) ATG9A (ENSCPOG00000025686) ANKZF1 (ENSCPOG00000004593) GLB1L (ENSCPOG00000004595) STK16 (ENSCPOG00000004600) TUBA4A (ENSCPOG00000037151) Hystricomorpha_b ANCESTRAL SPECIES 28 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916.c ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Long-tailed chinchilla MODERN SPECIES 160 SLC11A1 (ENSCLAG00000012795) CTDSP1 (ENSCLAG00000014330) VIL1 (ENSCLAG00000008436) USP37 (ENSCLAG00000007725) CNOT9 (ENSCLAG00000013219) PLCD4 (ENSCLAG00000008034) ENSCLAG00000011769 BCS1L (ENSCLAG00000014008) RNF25 (ENSCLAG00000012866) STK36 (ENSCLAG00000016247) ENSCLAG00000007759 CYP27A1 (ENSCLAG00000008414) PRKAG3 (ENSCLAG00000009025) WNT6 (ENSCLAG00000008099) WNT10A (ENSCLAG00000009082) CDK5R2 (ENSCLAG00000008214) ##22 FEV (ENSCLAG00000007374) CRYBA2 (ENSCLAG00000007468) CFAP65 (ENSCLAG00000008296) IHH (ENSCLAG00000008837) NHEJ1 (ENSCLAG00000010456) SLC23A3 (ENSCLAG00000012377) CNPPD1 (ENSCLAG00000011643) RETREG2 (ENSCLAG00000009980) ZFAND2B (ENSCLAG00000008639) ABCB6 (ENSCLAG00000009060) ATG9A (ENSCLAG00000008533) ANKZF1 (ENSCLAG00000008961) GLB1L (ENSCLAG00000007592) STK16 (ENSCLAG00000010421) TUBA4A (ENSCLAG00000011603) Degu MODERN SPECIES 137 ENSODEG00000006228 USP37 (ENSODEG00000006571) ENSODEG00000007185 PLCD4 (ENSODEG00000009216) ENSODEG00000006310 ENSODEG00000008977 ENSODEG00000008204 ENSODEG00000006989 ENSODEG00000010583 ENSODEG00000010088 TTLL4 (ENSODEG00000008937) CYP27A1 (ENSODEG00000006917) PRKAG3 (ENSODEG00000007789) WNT6 (ENSODEG00000006363) WNT10A (ENSODEG00000005957) CDK5R2 (ENSODEG00000019819) ##22 FEV (ENSODEG00000008014) CRYBA2 (ENSODEG00000007929) CFAP65 (ENSODEG00000008327) IHH (ENSODEG00000006698) ENSODEG00000005977 SLC23A3 (ENSODEG00000007227) CNPPD1 (ENSODEG00000006063) RETREG2 (ENSODEG00000007657) ZFAND2B (ENSODEG00000006890) ABCB6 (ENSODEG00000006250) ATG9A (ENSODEG00000009070) ENSODEG00000006254 ENSODEG00000006309 GLB1L (ENSODEG00000006656) STK16 (ENSODEG00000006054) Primates ANCESTRAL SPECIES 13 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00940000163279 ENSGT00390000005415.a.a ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Bushbaby MODERN SPECIES 128 CTDSP1 (ENSOGAG00000004159) VIL1 (ENSOGAG00000004160) ENSOGAG00000033815 USP37 (ENSOGAG00000004165) CNOT9 (ENSOGAG00000004173) PLCD4 (ENSOGAG00000004178) ZNF142 (ENSOGAG00000027693) BCS1L (ENSOGAG00000004183) RNF25 (ENSOGAG00000004184) STK36 (ENSOGAG00000004188) TTLL4 (ENSOGAG00000004192) CYP27A1 (ENSOGAG00000004196) PRKAG3 (ENSOGAG00000004200) WNT6 (ENSOGAG00000014075) WNT10A (ENSOGAG00000024185) CDK5R2 (ENSOGAG00000031192) ##22 ENSOGAG00000026329 CRYBA2 (ENSOGAG00000014089) CFAP65 (ENSOGAG00000014092) IHH (ENSOGAG00000014108) NHEJ1 (ENSOGAG00000028496) SLC23A3 (ENSOGAG00000015538) CNPPD1 (ENSOGAG00000015540) ENSOGAG00000028216 ZFAND2B (ENSOGAG00000015541) ABCB6 (ENSOGAG00000015544) ATG9A (ENSOGAG00000015549) ANKZF1 (ENSOGAG00000015554) GLB1L (ENSOGAG00000015557) STK16 (ENSOGAG00000015563) TUBA4A (ENSOGAG00000006004) Lemuriformes ANCESTRAL SPECIES 5 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.a.a ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mouse lemur MODERN SPECIES 30 SLC11A1 (ENSMICG00000032402) CTDSP1 (ENSMICG00000033882) VIL1 (ENSMICG00000005119) USP37 (ENSMICG00000005129) CNOT9 (ENSMICG00000005152) PLCD4 (ENSMICG00000005159) ENSMICG00000045688 ENSMICG00000005175 RNF25 (ENSMICG00000005179) STK36 (ENSMICG00000005186) TTLL4 (ENSMICG00000005204) CYP27A1 (ENSMICG00000006999) PRKAG3 (ENSMICG00000007009) WNT6 (ENSMICG00000045948) WNT10A (ENSMICG00000043872) CDK5R2 (ENSMICG00000007028) ##22 FEV (ENSMICG00000047914) CRYBA2 (ENSMICG00000042726) ENSMICG00000007043 IHH (ENSMICG00000026390) NHEJ1 (ENSMICG00000042607) SLC23A3 (ENSMICG00000000765) CNPPD1 (ENSMICG00000000769) ENSMICG00000047782 ZFAND2B (ENSMICG00000000774) ABCB6 (ENSMICG00000000778) ATG9A (ENSMICG00000033556) ANKZF1 (ENSMICG00000000789) GLB1L (ENSMICG00000000795) STK16 (ENSMICG00000000800) TUBA4A (ENSMICG00000035827) Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00950000185166 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415.a.a ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Greater bamboo lemur MODERN SPECIES 286 CTDSP1 (ENSPSMG00000024799) VIL1 (ENSPSMG00000024810) ENSPSMG00000024815 ENSPSMG00000024821 CNOT9 (ENSPSMG00000024845) PLCD4 (ENSPSMG00000024883) ENSPSMG00000024891 BCS1L (ENSPSMG00000024908) RNF25 (ENSPSMG00000024931) STK36 (ENSPSMG00000024959) TTLL4 (ENSPSMG00000025027) CYP27A1 (ENSPSMG00000025068) PRKAG3 (ENSPSMG00000025078) WNT6 (ENSPSMG00000025081) WNT10A (ENSPSMG00000025083) CDK5R2 (ENSPSMG00000025090) ##22 FEV (ENSPSMG00000025093) CRYBA2 (ENSPSMG00000025100) ENSPSMG00000025107 IHH (ENSPSMG00000025112) NHEJ1 (ENSPSMG00000025120) SLC23A3 (ENSPSMG00000025130) CNPPD1 (ENSPSMG00000025153) RETREG2 (ENSPSMG00000025165) ZFAND2B (ENSPSMG00000025191) ABCB6 (ENSPSMG00000025233) ATG9A (ENSPSMG00000025253) ANKZF1 (ENSPSMG00000025264) GLB1L (ENSPSMG00000025277) STK16 (ENSPSMG00000025317) TUBA4A (ENSPSMG00000025346) Coquerels sifaka MODERN SPECIES 259 SLC11A1 (ENSPCOG00000020402) CTDSP1 (ENSPCOG00000020126) VIL1 (ENSPCOG00000002346) USP37 (ENSPCOG00000020172) CNOT9 (ENSPCOG00000026587) PLCD4 (ENSPCOG00000019686) ENSPCOG00000003841 BCS1L (ENSPCOG00000019115) RNF25 (ENSPCOG00000015285) STK36 (ENSPCOG00000021753) TTLL4 (ENSPCOG00000023937) CYP27A1 (ENSPCOG00000017454) PRKAG3 (ENSPCOG00000020879) WNT6 (ENSPCOG00000016987) WNT10A (ENSPCOG00000027492) CDK5R2 (ENSPCOG00000004726) ##22 FEV (ENSPCOG00000026278) CRYBA2 (ENSPCOG00000019254) CFAP65 (ENSPCOG00000022616) IHH (ENSPCOG00000007373) NHEJ1 (ENSPCOG00000026909) SLC23A3 (ENSPCOG00000028411) CNPPD1 (ENSPCOG00000022844) RETREG2 (ENSPCOG00000025318) ZFAND2B (ENSPCOG00000018099) ABCB6 (ENSPCOG00000028584) ATG9A (ENSPCOG00000016102) ANKZF1 (ENSPCOG00000023893) GLB1L (ENSPCOG00000021121) STK16 (ENSPCOG00000028128) TUBA4A (ENSPCOG00000023925) Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Simiiformes ANCESTRAL SPECIES 15 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Rhinopithecus ANCESTRAL SPECIES 84 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.k ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037.k ENSGT00950000183165.a Black snub-nosed monkey MODERN SPECIES 1865 CTDSP1 (ENSRBIG00000042754) VIL1 (ENSRBIG00000044160) USP37 (ENSRBIG00000031381) CNOT9 (ENSRBIG00000042739) PLCD4 (ENSRBIG00000028935) ZNF142 (ENSRBIG00000029685) BCS1L (ENSRBIG00000004869) RNF25 (ENSRBIG00000031654) STK36 (ENSRBIG00000031646) TTLL4 (ENSRBIG00000032517) ENSRBIG00000036284 CYP27A1 (ENSRBIG00000032606) PRKAG3 (ENSRBIG00000007017) WNT6 (ENSRBIG00000007103) WNT10A (ENSRBIG00000045014) CDK5R2 (ENSRBIG00000000138) ##22 FEV (ENSRBIG00000045018) CRYBA2 (ENSRBIG00000045013) CFAP65 (ENSRBIG00000003141) IHH (ENSRBIG00000041034) NHEJ1 (ENSRBIG00000043995) SLC23A3 (ENSRBIG00000034617) CNPPD1 (ENSRBIG00000039903) RETREG2 (ENSRBIG00000038957) ZFAND2B (ENSRBIG00000034393) ABCB6 (ENSRBIG00000038255) ATG9A (ENSRBIG00000026492) ANKZF1 (ENSRBIG00000038988) GLB1L (ENSRBIG00000034384) ENSRBIG00000028232 ENSRBIG00000040754 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Vervet Monkey MODERN SPECIES 1 SLC11A1 (ENSCSAG00000008860) CTDSP1 (ENSCSAG00000008845) VIL1 (ENSCSAG00000008837) USP37 (ENSCSAG00000008823) CNOT9 (ENSCSAG00000008806) PLCD4 (ENSCSAG00000008792) ZNF142 (ENSCSAG00000008779) BCS1L (ENSCSAG00000008774) RNF25 (ENSCSAG00000008769) STK36 (ENSCSAG00000008730) TTLL4 (ENSCSAG00000008654) CYP27A1 (ENSCSAG00000008643) PRKAG3 (ENSCSAG00000008637) WNT6 (ENSCSAG00000008630) WNT10A (ENSCSAG00000008612) CDK5R2 (ENSCSAG00000018779) ##22 FEV (ENSCSAG00000008586) CRYBA2 (ENSCSAG00000008573) CFAP65 (ENSCSAG00000008506) IHH (ENSCSAG00000008404) NHEJ1 (ENSCSAG00000008380) SLC23A3 (ENSCSAG00000008344) CNPPD1 (ENSCSAG00000008316) RETREG2 (ENSCSAG00000008270) ZFAND2B (ENSCSAG00000008239) ABCB6 (ENSCSAG00000008232) ATG9A (ENSCSAG00000008219) ANKZF1 (ENSCSAG00000008195) GLB1L (ENSCSAG00000008146) STK16 (ENSCSAG00000008105) TUBA4A (ENSCSAG00000008100) Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375.w.a ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Macaca ANCESTRAL SPECIES 15 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375.w.a ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281.v ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Macaca_a ANCESTRAL SPECIES 17 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375.w.a ENSGT00940000157916 ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.b.b ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281.v ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000164110 ENSGT00940000161627.a.a.a.b.a.b.b.a.a.b.b.a.a.a.b ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Rhesus MODERN SPECIES 3 CATIP (ENSMMUG00000031218) SLC11A1 (ENSMMUG00000013359) VIL1 (ENSMMUG00000016899) USP37 (ENSMMUG00000015218) PLCD4 (ENSMMUG00000009626) ZNF142 (ENSMMUG00000006737) BCS1L (ENSMMUG00000006740) RNF25 (ENSMMUG00000006743) STK36 (ENSMMUG00000006744) TTLL4 (ENSMMUG00000006755) ENSMMUG00000049592 CYP27A1 (ENSMMUG00000006758) PRKAG3 (ENSMMUG00000021877) WNT6 (ENSMMUG00000052954) WNT10A (ENSMMUG00000055913) CDK5R2 (ENSMMUG00000031210) ##22 FEV (ENSMMUG00000064772) CRYBA2 (ENSMMUG00000064755) CFAP65 (ENSMMUG00000000783) IHH (ENSMMUG00000000785) NHEJ1 (ENSMMUG00000000786) SLC23A3 (ENSMMUG00000000788) CNPPD1 (ENSMMUG00000000791) RETREG2 (ENSMMUG00000000792) ENSMMUG00000061332 ZFAND2B (ENSMMUG00000019614) ATG9A (ENSMMUG00000019619) ANKZF1 (ENSMMUG00000014510) GLB1L (ENSMMUG00000019624) STK16 (ENSMMUG00000019626) TUBA4A (ENSMMUG00000019628) Pig-tailed macaque MODERN SPECIES 570 SLC11A1 (ENSMNEG00000043330) CTDSP1 (ENSMNEG00000010458) VIL1 (ENSMNEG00000034956) USP37 (ENSMNEG00000038072) CNOT9 (ENSMNEG00000001265) PLCD4 (ENSMNEG00000028669) ZNF142 (ENSMNEG00000041285) BCS1L (ENSMNEG00000035775) RNF25 (ENSMNEG00000039298) STK36 (ENSMNEG00000041592) TTLL4 (ENSMNEG00000040167) CYP27A1 (ENSMNEG00000033809) PRKAG3 (ENSMNEG00000037455) WNT6 (ENSMNEG00000031462) WNT10A (ENSMNEG00000043976) CDK5R2 (ENSMNEG00000012704) ##22 FEV (ENSMNEG00000044702) CRYBA2 (ENSMNEG00000035350) CFAP65 (ENSMNEG00000037521) IHH (ENSMNEG00000042582) NHEJ1 (ENSMNEG00000030294) SLC23A3 (ENSMNEG00000042866) CNPPD1 (ENSMNEG00000040784) RETREG2 (ENSMNEG00000042950) ZFAND2B (ENSMNEG00000041938) ABCB6 (ENSMNEG00000040783) ATG9A (ENSMNEG00000030084) ANKZF1 (ENSMNEG00000043308) GLB1L (ENSMNEG00000032580) STK16 (ENSMNEG00000044303) TUBA4A (ENSMNEG00000039170) Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375.x ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Olive baboon MODERN SPECIES 1 CATIP (ENSPANG00000019012) SLC11A1 (ENSPANG00000012402) CTDSP1 (ENSPANG00000001099) VIL1 (ENSPANG00000005751) USP37 (ENSPANG00000021870) ENSPANG00000010870 ENSPANG00000005493 ENSPANG00000010249 ENSPANG00000020343 ENSPANG00000044497 TTLL4 (ENSPANG00000008977) CYP27A1 (ENSPANG00000004702) PRKAG3 (ENSPANG00000000437) WNT6 (ENSPANG00000022973) WNT10A (ENSPANG00000011987) CDK5R2 (ENSPANG00000009421) ##22 FEV (ENSPANG00000017464) CRYBA2 (ENSPANG00000021174) CFAP65 (ENSPANG00000030993) IHH (ENSPANG00000017463) NHEJ1 (ENSPANG00000009814) SLC23A3 (ENSPANG00000011561) CNPPD1 (ENSPANG00000018165) RETREG2 (ENSPANG00000007323) ZFAND2B (ENSPANG00000000725) ABCB6 (ENSPANG00000020232) ATG9A (ENSPANG00000017760) ANKZF1 (ENSPANG00000006511) GLB1L (ENSPANG00000010201) STK16 (ENSPANG00000007826) TUBA4A (ENSPANG00000041659) Cercopithecinae_d ANCESTRAL SPECIES ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375.x ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Sooty mangabey MODERN SPECIES 663 SLC11A1 (ENSCATG00000018339) CTDSP1 (ENSCATG00000034995) VIL1 (ENSCATG00000036175) USP37 (ENSCATG00000023935) CNOT9 (ENSCATG00000045348) PLCD4 (ENSCATG00000033628) ZNF142 (ENSCATG00000044960) BCS1L (ENSCATG00000011743) RNF25 (ENSCATG00000041945) STK36 (ENSCATG00000041467) TTLL4 (ENSCATG00000036114) CYP27A1 (ENSCATG00000021484) PRKAG3 (ENSCATG00000042843) WNT6 (ENSCATG00000034505) WNT10A (ENSCATG00000041079) CDK5R2 (ENSCATG00000021149) ##22 FEV (ENSCATG00000042120) CRYBA2 (ENSCATG00000036307) CFAP65 (ENSCATG00000044214) IHH (ENSCATG00000011857) NHEJ1 (ENSCATG00000031316) SLC23A3 (ENSCATG00000032304) CNPPD1 (ENSCATG00000036265) ENSCATG00000038425 ZFAND2B (ENSCATG00000035298) ABCB6 (ENSCATG00000044148) ATG9A (ENSCATG00000037370) ANKZF1 (ENSCATG00000039880) GLB1L (ENSCATG00000039765) ENSCATG00000037306 TUBA4A (ENSCATG00000033332) Hominoidea ANCESTRAL SPECIES 15 ENSGT01040000240451.a.a ENSGT00910000147849 ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Gibbon MODERN SPECIES 14 ENSNLEG00000008612 ENSNLEG00000035866 VIL1 (ENSNLEG00000008619) USP37 (ENSNLEG00000008655) CNOT9 (ENSNLEG00000008737) PLCD4 (ENSNLEG00000008756) ZNF142 (ENSNLEG00000008760) BCS1L (ENSNLEG00000030685) RNF25 (ENSNLEG00000008812) STK36 (ENSNLEG00000008852) TTLL4 (ENSNLEG00000008904) CYP27A1 (ENSNLEG00000008910) PRKAG3 (ENSNLEG00000008942) WNT6 (ENSNLEG00000008977) WNT10A (ENSNLEG00000008992) CDK5R2 (ENSNLEG00000018723) ##22 FEV (ENSNLEG00000009001) CRYBA2 (ENSNLEG00000009012) CFAP65 (ENSNLEG00000009025) IHH (ENSNLEG00000009054) NHEJ1 (ENSNLEG00000009056) SLC23A3 (ENSNLEG00000009070) CNPPD1 (ENSNLEG00000034862) RETREG2 (ENSNLEG00000035903) ZFAND2B (ENSNLEG00000009113) ABCB6 (ENSNLEG00000009125) ATG9A (ENSNLEG00000009166) ANKZF1 (ENSNLEG00000009207) GLB1L (ENSNLEG00000009246) STK16 (ENSNLEG00000034331) TUBA4A (ENSNLEG00000027445) Hominidae ANCESTRAL SPECIES 17 ENSGT01040000240451.a.a ENSGT00910000147849 ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Orangutan MODERN SPECIES 15 SLC11A1 (ENSPPYG00000013172) CTDSP1 (ENSPPYG00000036372) VIL1 (ENSPPYG00000013174) USP37 (ENSPPYG00000013175) CNOT9 (ENSPPYG00000036751) PLCD4 (ENSPPYG00000013177) ZNF142 (ENSPPYG00000013178) BCS1L (ENSPPYG00000013179) RNF25 (ENSPPYG00000013180) STK36 (ENSPPYG00000013181) TTLL4 (ENSPPYG00000013182) CYP27A1 (ENSPPYG00000013385) PRKAG3 (ENSPPYG00000013184) WNT6 (ENSPPYG00000013185) WNT10A (ENSPPYG00000032996) CDK5R2 (ENSPPYG00000013188) ##22 FEV (ENSPPYG00000013189) CRYBA2 (ENSPPYG00000013190) CFAP65 (ENSPPYG00000013191) IHH (ENSPPYG00000033632) NHEJ1 (ENSPPYG00000013193) SLC23A3 (ENSPPYG00000013194) CNPPD1 (ENSPPYG00000013195) ENSPPYG00000013196 ZFAND2B (ENSPPYG00000013197) ABCB6 (ENSPPYG00000013198) ATG9A (ENSPPYG00000013199) ANKZF1 (ENSPPYG00000013200) GLB1L (ENSPPYG00000013201) STK16 (ENSPPYG00000013202) TUBA4A (ENSPPYG00000013203) Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT01040000240451.a.a ENSGT00910000147849 ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Gorilla MODERN SPECIES 15 ENSGGOG00000041563 VIL1 (ENSGGOG00000014322) USP37 (ENSGGOG00000014335) CNOT9 (ENSGGOG00000011091) PLCD4 (ENSGGOG00000011858) ENSGGOG00000024718 BCS1L (ENSGGOG00000001899) RNF25 (ENSGGOG00000001901) ENSGGOG00000043717 ENSGGOG00000001905 TTLL4 (ENSGGOG00000001914) CYP27A1 (ENSGGOG00000003243) PRKAG3 (ENSGGOG00000003249) WNT6 (ENSGGOG00000003259) WNT10A (ENSGGOG00000000870) ENSGGOG00000007771 ##22 FEV (ENSGGOG00000010787) CRYBA2 (ENSGGOG00000010794) CFAP65 (ENSGGOG00000010798) ENSGGOG00000041386 NHEJ1 (ENSGGOG00000010822) SLC23A3 (ENSGGOG00000010828) CNPPD1 (ENSGGOG00000010837) RETREG2 (ENSGGOG00000010846) STK16 (ENSGGOG00000010907) TUBA4A (ENSGGOG00000023578) TUBA4B (ENSGGOG00000040612) DNAJB2 (ENSGGOG00000010915) PTPRN (ENSGGOG00000011854) RESP18 (ENSGGOG00000004296) DNPEP (ENSGGOG00000003423) Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Human MODERN SPECIES 11 SLC11A1 (ENSG00000018280) CTDSP1 (ENSG00000144579) VIL1 (ENSG00000127831) USP37 (ENSG00000135913) CNOT9 (ENSG00000144580) PLCD4 (ENSG00000115556) ZNF142 (ENSG00000115568) BCS1L (ENSG00000074582) RNF25 (ENSG00000163481) STK36 (ENSG00000163482) TTLL4 (ENSG00000135912) CYP27A1 (ENSG00000135929) PRKAG3 (ENSG00000115592) WNT6 (ENSG00000115596) WNT10A (ENSG00000135925) CDK5R2 (ENSG00000171450) ##22 FEV (ENSG00000163497) CRYBA2 (ENSG00000163499) CFAP65 (ENSG00000181378) IHH (ENSG00000163501) NHEJ1 (ENSG00000187736) SLC23A3 (ENSG00000213901) CNPPD1 (ENSG00000115649) RETREG2 (ENSG00000144567) ZFAND2B (ENSG00000158552) ABCB6 (ENSG00000115657) ATG9A (ENSG00000198925) ANKZF1 (ENSG00000163516) GLB1L (ENSG00000163521) STK16 (ENSG00000115661) TUBA4A (ENSG00000127824) Pan ANCESTRAL SPECIES 12 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Chimpanzee MODERN SPECIES 15 SLC11A1 (ENSPTRG00000012917) CTDSP1 (ENSPTRG00000012918) VIL1 (ENSPTRG00000012919) USP37 (ENSPTRG00000012920) CNOT9 (ENSPTRG00000012921) PLCD4 (ENSPTRG00000012922) ZNF142 (ENSPTRG00000012923) BCS1L (ENSPTRG00000012924) RNF25 (ENSPTRG00000012925) STK36 (ENSPTRG00000012926) TTLL4 (ENSPTRG00000012927) CYP27A1 (ENSPTRG00000012928) PRKAG3 (ENSPTRG00000012929) WNT6 (ENSPTRG00000045565) WNT10A (ENSPTRG00000012931) CDK5R2 (ENSPTRG00000042910) ##22 FEV (ENSPTRG00000045039) CRYBA2 (ENSPTRG00000012934) CFAP65 (ENSPTRG00000012937) IHH (ENSPTRG00000012938) NHEJ1 (ENSPTRG00000034481) SLC23A3 (ENSPTRG00000012940) CNPPD1 (ENSPTRG00000012941) RETREG2 (ENSPTRG00000012942) ZFAND2B (ENSPTRG00000012944) ABCB6 (ENSPTRG00000012945) ATG9A (ENSPTRG00000012943) ANKZF1 (ENSPTRG00000012946) GLB1L (ENSPTRG00000012947) TUBA4A (ENSPTRG00000012949) STK16 (ENSPTRG00000012948) Platyrrhini ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.m ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Mas night monkey MODERN SPECIES 357 SLC11A1 (ENSANAG00000038479) CTDSP1 (ENSANAG00000033831) VIL1 (ENSANAG00000020565) USP37 (ENSANAG00000031880) ENSANAG00000038509 PLCD4 (ENSANAG00000032428) ZNF142 (ENSANAG00000036961) BCS1L (ENSANAG00000034542) RNF25 (ENSANAG00000029471) STK36 (ENSANAG00000030567) TTLL4 (ENSANAG00000030178) CYP27A1 (ENSANAG00000034366) PRKAG3 (ENSANAG00000032002) WNT6 (ENSANAG00000026110) WNT10A (ENSANAG00000026652) CDK5R2 (ENSANAG00000013180) ##22 FEV (ENSANAG00000022907) CRYBA2 (ENSANAG00000030100) CFAP65 (ENSANAG00000026544) IHH (ENSANAG00000038500) NHEJ1 (ENSANAG00000034155) SLC23A3 (ENSANAG00000031993) CNPPD1 (ENSANAG00000024334) ENSANAG00000025113 ZFAND2B (ENSANAG00000008091) ABCB6 (ENSANAG00000032665) ATG9A (ENSANAG00000031038) ANKZF1 (ENSANAG00000033345) GLB1L (ENSANAG00000019491) STK16 (ENSANAG00000036764) TUBA4A (ENSANAG00000028048) Cebidae ANCESTRAL SPECIES 11 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.m ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Marmoset MODERN SPECIES 18 VIL1 (ENSCJAG00000010950) USP37 (ENSCJAG00000010983) CNOT9 (ENSCJAG00000011079) PLCD4 (ENSCJAG00000038890) ZNF142 (ENSCJAG00000011145) BCS1L (ENSCJAG00000011149) RNF25 (ENSCJAG00000011192) STK36 (ENSCJAG00000011237) ENSCJAG00000073749 TTLL4 (ENSCJAG00000011294) CYP27A1 (ENSCJAG00000011342) ENSCJAG00000083160 PRKAG3 (ENSCJAG00000011362) WNT6 (ENSCJAG00000011399) WNT10A (ENSCJAG00000011403) CDK5R2 (ENSCJAG00000084028) ##22 FEV (ENSCJAG00000070578) CRYBA2 (ENSCJAG00000011426) CFAP65 (ENSCJAG00000011429) IHH (ENSCJAG00000046454) NHEJ1 (ENSCJAG00000011471) SLC23A3 (ENSCJAG00000011478) CNPPD1 (ENSCJAG00000011492) RETREG2 (ENSCJAG00000046567) ENSCJAG00000047609 ZFAND2B (ENSCJAG00000011503) ABCB6 (ENSCJAG00000011512) ATG9A (ENSCJAG00000011523) ANKZF1 (ENSCJAG00000011574) GLB1L (ENSCJAG00000011433) STK16 (ENSCJAG00000011592) Cebidae_a ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225.m ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415.b ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Bolivian squirrel monkey MODERN SPECIES 56 VIL1 (ENSSBOG00000031003) USP37 (ENSSBOG00000019926) ENSSBOG00000022872 PLCD4 (ENSSBOG00000033997) ZNF142 (ENSSBOG00000024040) BCS1L (ENSSBOG00000031182) RNF25 (ENSSBOG00000020870) STK36 (ENSSBOG00000032303) TTLL4 (ENSSBOG00000029426) ENSSBOG00000030556 ENSSBOG00000024877 CYP27A1 (ENSSBOG00000035228) PRKAG3 (ENSSBOG00000034985) WNT6 (ENSSBOG00000034349) WNT10A (ENSSBOG00000028713) CDK5R2 (ENSSBOG00000027687) ##22 FEV (ENSSBOG00000031391) CRYBA2 (ENSSBOG00000024164) CFAP65 (ENSSBOG00000020612) IHH (ENSSBOG00000018304) NHEJ1 (ENSSBOG00000019236) SLC23A3 (ENSSBOG00000022523) CNPPD1 (ENSSBOG00000024345) RETREG2 (ENSSBOG00000033227) ENSSBOG00000032266 ZFAND2B (ENSSBOG00000026397) ABCB6 (ENSSBOG00000030728) ATG9A (ENSSBOG00000028712) ANKZF1 (ENSSBOG00000022051) GLB1L (ENSSBOG00000026231) STK16 (ENSSBOG00000034683) Capuchin MODERN SPECIES 91 CTDSP1 (ENSCCAG00000035606) VIL1 (ENSCCAG00000026608) USP37 (ENSCCAG00000036554) ENSCCAG00000017272 PLCD4 (ENSCCAG00000037074) ZNF142 (ENSCCAG00000025625) RNF25 (ENSCCAG00000022960) BCS1L (ENSCCAG00000030334) STK36 (ENSCCAG00000028077) TTLL4 (ENSCCAG00000033755) CYP27A1 (ENSCCAG00000021874) PRKAG3 (ENSCCAG00000033243) WNT6 (ENSCCAG00000002129) WNT10A (ENSCCAG00000033457) ENSCCAG00000017356 CDK5R2 (ENSCCAG00000017322) ##22 FEV (ENSCCAG00000034592) CRYBA2 (ENSCCAG00000033225) CFAP65 (ENSCCAG00000032465) IHH (ENSCCAG00000036432) NHEJ1 (ENSCCAG00000019786) SLC23A3 (ENSCCAG00000021766) CNPPD1 (ENSCCAG00000022297) RETREG2 (ENSCCAG00000022658) ZFAND2B (ENSCCAG00000036928) ABCB6 (ENSCCAG00000027179) ATG9A (ENSCCAG00000020015) ANKZF1 (ENSCCAG00000028113) GLB1L (ENSCCAG00000011525) TUBA4A (ENSCCAG00000028738) STK16 (ENSCCAG00000024068) Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000164110 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000008812.a ##22 Common shrew MODERN SPECIES 9990 ENSSARG00000000428 ##22 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Suina ANCESTRAL SPECIES 3 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Chacoan peccary MODERN SPECIES 940 SLC11A1 (ENSCWAG00000004603) CTDSP1 (ENSCWAG00000004574) VIL1 (ENSCWAG00000004429) USP37 (ENSCWAG00000020257) CNOT9 (ENSCWAG00000020235) PLCD4 (ENSCWAG00000020155) ENSCWAG00000020124 BCS1L (ENSCWAG00000020111) RNF25 (ENSCWAG00000020094) STK36 (ENSCWAG00000020071) TTLL4 (ENSCWAG00000019882) CYP27A1 (ENSCWAG00000019842) PRKAG3 (ENSCWAG00000019794) WNT6 (ENSCWAG00000019766) WNT10A (ENSCWAG00000019744) CDK5R2 (ENSCWAG00000019736) ##22 FEV (ENSCWAG00000019728) CRYBA2 (ENSCWAG00000019713) CFAP65 (ENSCWAG00000019572) IHH (ENSCWAG00000019532) NHEJ1 (ENSCWAG00000019486) SLC23A3 (ENSCWAG00000019284) CNPPD1 (ENSCWAG00000019251) RETREG2 (ENSCWAG00000019237) ZFAND2B (ENSCWAG00000019180) ABCB6 (ENSCWAG00000019049) ATG9A (ENSCWAG00000018998) ANKZF1 (ENSCWAG00000018914) GLB1L (ENSCWAG00000018863) STK16 (ENSCWAG00000018729) ENSCWAG00000018690 Pig MODERN SPECIES 6 SLC11A1 (ENSSSCG00000039798) CTDSP1 (ENSSSCG00000036938) VIL1 (ENSSSCG00000016196) USP37 (ENSSSCG00000016194) CNOT9 (ENSSSCG00000016193) PLCD4 (ENSSSCG00000016192) ENSSSCG00000016191 BCS1L (ENSSSCG00000035775) RNF25 (ENSSSCG00000016202) STK36 (ENSSSCG00000026964) TTLL4 (ENSSSCG00000016201) CYP27A1 (ENSSSCG00000016199) PRKAG3 (ENSSSCG00000016200) WNT6 (ENSSSCG00000036932) WNT10A (ENSSSCG00000026958) CDK5R2 (ENSSSCG00000059789) ##22 FEV (ENSSSCG00000035988) CRYBA2 (ENSSSCG00000040776) CFAP65 (ENSSSCG00000016203) IHH (ENSSSCG00000016204) NHEJ1 (ENSSSCG00000016205) SLC23A3 (ENSSSCG00000029694) CNPPD1 (ENSSSCG00000016206) RETREG2 (ENSSSCG00000016207) ZFAND2B (ENSSSCG00000016208) ABCB6 (ENSSSCG00000016210) ATG9A (ENSSSCG00000016211) ANKZF1 (ENSSSCG00000016212) GLB1L (ENSSSCG00000016213) STK16 (ENSSSCG00000016214) TUBA4A (ENSSSCG00000016216) Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Camelidae ANCESTRAL SPECIES 2 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Arabian camel MODERN SPECIES 31 SLC11A1 (ENSCDRG00005017805) CTDSP1 (ENSCDRG00005017859) VIL1 (ENSCDRG00005017921) USP37 (ENSCDRG00005017998) CNOT9 (ENSCDRG00005018120) PLCD4 (ENSCDRG00005018172) ENSCDRG00005018284 BCS1L (ENSCDRG00005018346) RNF25 (ENSCDRG00005018384) STK36 (ENSCDRG00005018460) TTLL4 (ENSCDRG00005018698) CYP27A1 (ENSCDRG00005000044) PRKAG3 (ENSCDRG00005000055) WNT6 (ENSCDRG00005000063) WNT10A (ENSCDRG00005000075) ENSCDRG00005000083 ##22 FEV (ENSCDRG00005000093) CRYBA2 (ENSCDRG00005000127) CFAP65 (ENSCDRG00005000170) IHH (ENSCDRG00005000319) NHEJ1 (ENSCDRG00005000334) SLC23A3 (ENSCDRG00005000361) CNPPD1 (ENSCDRG00005000383) RETREG2 (ENSCDRG00005000396) ZFAND2B (ENSCDRG00005000431) ABCB6 (ENSCDRG00005000480) ATG9A (ENSCDRG00005000564) ANKZF1 (ENSCDRG00005000595) GLB1L (ENSCDRG00005000640) STK16 (ENSCDRG00005000710) TUBA4A (ENSCDRG00005000805) Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Cetacea ANCESTRAL SPECIES 14 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00990000213068 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Beluga whale MODERN SPECIES 84 SLC11A1 (ENSDLEG00000012093) CTDSP1 (ENSDLEG00000016713) VIL1 (ENSDLEG00000016736) USP37 (ENSDLEG00000016872) CNOT9 (ENSDLEG00000016927) PLCD4 (ENSDLEG00000016975) ZNF142 (ENSDLEG00000017809) BCS1L (ENSDLEG00000017902) RNF25 (ENSDLEG00000017931) STK36 (ENSDLEG00000018011) TTLL4 (ENSDLEG00000018443) CYP27A1 (ENSDLEG00000018796) PRKAG3 (ENSDLEG00000018828) WNT6 (ENSDLEG00000018852) WNT10A (ENSDLEG00000018857) CDK5R2 (ENSDLEG00000018862) ##22 FEV (ENSDLEG00000018865) CRYBA2 (ENSDLEG00000018870) CFAP65 (ENSDLEG00000018889) IHH (ENSDLEG00000018943) NHEJ1 (ENSDLEG00000018950) SLC23A3 (ENSDLEG00000018960) CNPPD1 (ENSDLEG00000018979) RETREG2 (ENSDLEG00000018990) ZFAND2B (ENSDLEG00000018999) ABCB6 (ENSDLEG00000019026) ATG9A (ENSDLEG00000019049) ENSDLEG00000019057 GLB1L (ENSDLEG00000019064) STK16 (ENSDLEG00000019079) TUBA4A (ENSDLEG00000019091) Narwhal MODERN SPECIES 302 SLC11A1 (ENSMMNG00015006247) CTDSP1 (ENSMMNG00015006213) VIL1 (ENSMMNG00015006174) USP37 (ENSMMNG00015006111) CNOT9 (ENSMMNG00015006070) PLCD4 (ENSMMNG00015006009) ENSMMNG00015005968 BCS1L (ENSMMNG00015005949) RNF25 (ENSMMNG00015005924) STK36 (ENSMMNG00015005870) TTLL4 (ENSMMNG00015005749) CYP27A1 (ENSMMNG00015005674) PRKAG3 (ENSMMNG00015005637) WNT6 (ENSMMNG00015005610) WNT10A (ENSMMNG00015005592) CDK5R2 (ENSMMNG00015005580) ##22 FEV (ENSMMNG00015005567) CRYBA2 (ENSMMNG00015005549) CFAP65 (ENSMMNG00015005484) IHH (ENSMMNG00015005455) NHEJ1 (ENSMMNG00015005440) SLC23A3 (ENSMMNG00015005390) CNPPD1 (ENSMMNG00015005357) RETREG2 (ENSMMNG00015005333) ZFAND2B (ENSMMNG00015005310) ABCB6 (ENSMMNG00015005232) ATG9A (ENSMMNG00015005188) ENSMMNG00015005174 ENSMMNG00015005169 GLB1L (ENSMMNG00015005156) STK16 (ENSMMNG00015005125) Vaquita MODERN SPECIES 18 CTDSP1 (ENSPSNG00000013075) VIL1 (ENSPSNG00000012747) USP37 (ENSPSNG00000012626) CNOT9 (ENSPSNG00000012552) PLCD4 (ENSPSNG00000012217) ENSPSNG00000012152 ENSPSNG00000012088 BCS1L (ENSPSNG00000012039) RNF25 (ENSPSNG00000011955) STK36 (ENSPSNG00000011860) TTLL4 (ENSPSNG00000011722) CYP27A1 (ENSPSNG00000011602) PRKAG3 (ENSPSNG00000011370) WNT6 (ENSPSNG00000011297) WNT10A (ENSPSNG00000011245) CDK5R2 (ENSPSNG00000011232) ##22 FEV (ENSPSNG00000011170) CRYBA2 (ENSPSNG00000011122) CFAP65 (ENSPSNG00000010593) IHH (ENSPSNG00000010524) NHEJ1 (ENSPSNG00000010446) SLC23A3 (ENSPSNG00000010037) CNPPD1 (ENSPSNG00000009927) RETREG2 (ENSPSNG00000009864) ZFAND2B (ENSPSNG00000009774) ABCB6 (ENSPSNG00000009668) ATG9A (ENSPSNG00000019260) ENSPSNG00000019067 GLB1L (ENSPSNG00000018947) STK16 (ENSPSNG00000018746) TUBA4A (ENSPSNG00000018656) Sperm whale MODERN SPECIES 11 ENSPCTG00005017711 ENSPCTG00005017764 PNKD (ENSPCTG00005017792) VIL1 (ENSPCTG00005017833) USP37 (ENSPCTG00005017971) CNOT9 (ENSPCTG00005018215) PLCD4 (ENSPCTG00005018288) ZNF142 (ENSPCTG00005018649) BCS1L (ENSPCTG00005018671) RNF25 (ENSPCTG00005018698) STK36 (ENSPCTG00005018735) TTLL4 (ENSPCTG00005018815) ENSPCTG00005018949 WNT6 (ENSPCTG00005018979) WNT10A (ENSPCTG00005019019) CDK5R2 (ENSPCTG00005019049) ##22 FEV (ENSPCTG00005019061) CRYBA2 (ENSPCTG00005019097) CFAP65 (ENSPCTG00005019150) IHH (ENSPCTG00005019553) ENSPCTG00005019578 ENSPCTG00005019597 PTPRN (ENSPCTG00005019662) DNAJB2 (ENSPCTG00005019868) ENSPCTG00005020056 TUBA4A (ENSPCTG00005020138) SLC23A3 (ENSPCTG00005020177) CNPPD1 (ENSPCTG00005020329) RETREG2 (ENSPCTG00005020360) SPEG (ENSPCTG00005020396) SPEGNB (ENSPCTG00005020639) Blue whale MODERN SPECIES 18 CTDSP1 (ENSBMSG00010004557) VIL1 (ENSBMSG00010004591) USP37 (ENSBMSG00010004662) CNOT9 (ENSBMSG00010004706) PLCD4 (ENSBMSG00010004724) ENSBMSG00010004764 BCS1L (ENSBMSG00010004770) RNF25 (ENSBMSG00010004780) STK36 (ENSBMSG00010004792) TTLL4 (ENSBMSG00010004810) ENSBMSG00010004828 CYP27A1 (ENSBMSG00010004838) PRKAG3 (ENSBMSG00010000199) WNT6 (ENSBMSG00010000268) WNT10A (ENSBMSG00010000304) CDK5R2 (ENSBMSG00010000336) ##22 ENSBMSG00010000352 FEV (ENSBMSG00010000362) CRYBA2 (ENSBMSG00010000382) CFAP65 (ENSBMSG00010000454) IHH (ENSBMSG00010000536) NHEJ1 (ENSBMSG00010000554) SLC23A3 (ENSBMSG00010000582) CNPPD1 (ENSBMSG00010000605) RETREG2 (ENSBMSG00010000620) ZFAND2B (ENSBMSG00010000665) ABCB6 (ENSBMSG00010000736) ATG9A (ENSBMSG00010000868) ENSBMSG00010000923 GLB1L (ENSBMSG00010000965) STK16 (ENSBMSG00010001013) Pecora ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Yarkand deer MODERN SPECIES 31 SLC11A1 (ENSCHYG00000001919) CTDSP1 (ENSCHYG00000001880) VIL1 (ENSCHYG00000001829) USP37 (ENSCHYG00000001693) CNOT9 (ENSCHYG00000001629) PLCD4 (ENSCHYG00000001587) ENSCHYG00000001556 BCS1L (ENSCHYG00000001534) RNF25 (ENSCHYG00000001498) STK36 (ENSCHYG00000001439) TTLL4 (ENSCHYG00000001312) CYP27A1 (ENSCHYG00000001246) PRKAG3 (ENSCHYG00000001210) WNT6 (ENSCHYG00000001192) WNT10A (ENSCHYG00000001166) ENSCHYG00000001150 ##22 FEV (ENSCHYG00000001142) CRYBA2 (ENSCHYG00000001123) CFAP65 (ENSCHYG00000000994) IHH (ENSCHYG00000000953) NHEJ1 (ENSCHYG00000000939) SLC23A3 (ENSCHYG00000000872) CNPPD1 (ENSCHYG00000000854) RETREG2 (ENSCHYG00000000827) ZFAND2B (ENSCHYG00000000782) ABCB6 (ENSCHYG00000000721) ATG9A (ENSCHYG00000000684) ANKZF1 (ENSCHYG00000000651) GLB1L (ENSCHYG00000000594) STK16 (ENSCHYG00000000530) TUBA4A (ENSCHYG00000000497) Percora_a ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Siberian musk deer MODERN SPECIES 352 SLC11A1 (ENSMMSG00000017070) CTDSP1 (ENSMMSG00000017093) VIL1 (ENSMMSG00000017148) USP37 (ENSMMSG00000017309) CNOT9 (ENSMMSG00000017385) PLCD4 (ENSMMSG00000017421) ENSMMSG00000017469 BCS1L (ENSMMSG00000017492) RNF25 (ENSMMSG00000017525) STK36 (ENSMMSG00000017568) TTLL4 (ENSMMSG00000017658) CYP27A1 (ENSMMSG00000017780) PRKAG3 (ENSMMSG00000017891) WNT6 (ENSMMSG00000017986) WNT10A (ENSMMSG00000018012) CDK5R2 (ENSMMSG00000018049) ##22 FEV (ENSMMSG00000018069) CRYBA2 (ENSMMSG00000018103) CFAP65 (ENSMMSG00000018168) IHH (ENSMMSG00000018411) NHEJ1 (ENSMMSG00000018435) SLC23A3 (ENSMMSG00000018467) CNPPD1 (ENSMMSG00000018565) RETREG2 (ENSMMSG00000018601) ZFAND2B (ENSMMSG00000018683) ABCB6 (ENSMMSG00000018803) ATG9A (ENSMMSG00000018918) ANKZF1 (ENSMMSG00000018979) GLB1L (ENSMMSG00000019120) STK16 (ENSMMSG00000019198) TUBA4A (ENSMMSG00000019327) Bovidae ANCESTRAL SPECIES 8 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Caprinae ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Rambouillet Sheep MODERN SPECIES 11 CTDSP1 (ENSOARG00020007259) ENSOARG00020007316 VIL1 (ENSOARG00020007377) USP37 (ENSOARG00020007519) CNOT9 (ENSOARG00020007920) PLCD4 (ENSOARG00020007976) ENSOARG00020008046 BCS1L (ENSOARG00020008102) RNF25 (ENSOARG00020008163) STK36 (ENSOARG00020008297) TTLL4 (ENSOARG00020008478) CYP27A1 (ENSOARG00020008639) PRKAG3 (ENSOARG00020008702) WNT6 (ENSOARG00020008888) WNT10A (ENSOARG00020008936) CDK5R2 (ENSOARG00020008961) ##22 FEV (ENSOARG00020008978) CRYBA2 (ENSOARG00020009010) CFAP65 (ENSOARG00020009094) IHH (ENSOARG00020009787) NHEJ1 (ENSOARG00020009824) CNPPD1 (ENSOARG00020010841) RETREG2 (ENSOARG00020010880) ZFAND2B (ENSOARG00020010938) ABCB6 (ENSOARG00020011210) ATG9A (ENSOARG00020011497) ANKZF1 (ENSOARG00020011753) GLB1L (ENSOARG00020011884) STK16 (ENSOARG00020012238) TUBA4A (ENSOARG00020012625) ENSOARG00020012912 Goat MODERN SPECIES 11 SLC11A1 (ENSCHIG00000017190) CTDSP1 (ENSCHIG00000022405) VIL1 (ENSCHIG00000016310) USP37 (ENSCHIG00000007660) CNOT9 (ENSCHIG00000026257) PLCD4 (ENSCHIG00000022545) ENSCHIG00000022713 BCS1L (ENSCHIG00000009282) RNF25 (ENSCHIG00000010384) STK36 (ENSCHIG00000020004) TTLL4 (ENSCHIG00000022274) CYP27A1 (ENSCHIG00000025011) PRKAG3 (ENSCHIG00000023341) WNT6 (ENSCHIG00000023410) WNT10A (ENSCHIG00000022853) CDK5R2 (ENSCHIG00000012592) ##22 FEV (ENSCHIG00000015312) CRYBA2 (ENSCHIG00000020371) CFAP65 (ENSCHIG00000015285) IHH (ENSCHIG00000016564) NHEJ1 (ENSCHIG00000014914) SLC23A3 (ENSCHIG00000014898) CNPPD1 (ENSCHIG00000011186) RETREG2 (ENSCHIG00000009217) ZFAND2B (ENSCHIG00000008045) ABCB6 (ENSCHIG00000015177) ATG9A (ENSCHIG00000023070) ANKZF1 (ENSCHIG00000022697) GLB1L (ENSCHIG00000019815) STK16 (ENSCHIG00000010245) TUBA4A (ENSCHIG00000002435) Bovinae ANCESTRAL SPECIES 5 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a American bison MODERN SPECIES 3330 SLC11A1 (ENSBBBG00000009627) CTDSP1 (ENSBBBG00000009622) VIL1 (ENSBBBG00000009616) USP37 (ENSBBBG00000009603) CNOT9 (ENSBBBG00000009564) PLCD4 (ENSBBBG00000009557) ENSBBBG00000009542 BCS1L (ENSBBBG00000009528) RNF25 (ENSBBBG00000001540) STK36 (ENSBBBG00000001539) TTLL4 (ENSBBBG00000009504) CYP27A1 (ENSBBBG00000009491) PRKAG3 (ENSBBBG00000009488) WNT6 (ENSBBBG00000009484) WNT10A (ENSBBBG00000009483) CDK5R2 (ENSBBBG00000009480) ##22 CRYBA2 (ENSBBBG00000009479) CFAP65 (ENSBBBG00000009477) IHH (ENSBBBG00000009468) NHEJ1 (ENSBBBG00000009466) SLC23A3 (ENSBBBG00000009461) CNPPD1 (ENSBBBG00000009454) RETREG2 (ENSBBBG00000006755) ZFAND2B (ENSBBBG00000025422) ABCB6 (ENSBBBG00000007757) ATG9A (ENSBBBG00000006629) ANKZF1 (ENSBBBG00000024944) GLB1L (ENSBBBG00000024851) STK16 (ENSBBBG00000006477) TUBA4A (ENSBBBG00000024643) ENSBBBG00000024627 Bos ANCESTRAL SPECIES 6 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Bos_a ANCESTRAL SPECIES 4 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Wild yak MODERN SPECIES 262 CTDSP1 (ENSBMUG00000025903) VIL1 (ENSBMUG00000025916) USP37 (ENSBMUG00000025936) CNOT9 (ENSBMUG00000025942) PLCD4 (ENSBMUG00000025954) ENSBMUG00000025970 BCS1L (ENSBMUG00000025973) RNF25 (ENSBMUG00000025976) STK36 (ENSBMUG00000025981) TTLL4 (ENSBMUG00000025991) ENSBMUG00000025993 CYP27A1 (ENSBMUG00000026005) PRKAG3 (ENSBMUG00000026007) WNT6 (ENSBMUG00000026009) WNT10A (ENSBMUG00000026013) ENSBMUG00000026015 ##22 FEV (ENSBMUG00000026019) CRYBA2 (ENSBMUG00000026021) CFAP65 (ENSBMUG00000026047) IHH (ENSBMUG00000026052) NHEJ1 (ENSBMUG00000026054) SLC23A3 (ENSBMUG00000026064) CNPPD1 (ENSBMUG00000026070) RETREG2 (ENSBMUG00000026075) ZFAND2B (ENSBMUG00000026079) ABCB6 (ENSBMUG00000026082) ATG9A (ENSBMUG00000026090) ANKZF1 (ENSBMUG00000026096) GLB1L (ENSBMUG00000026101) STK16 (ENSBMUG00000026108) TUBA4A (ENSBMUG00000026111) Domestic yak MODERN SPECIES 11 SLC11A1 (ENSBGRG00000001439) CTDSP1 (ENSBGRG00000001379) VIL1 (ENSBGRG00000001312) USP37 (ENSBGRG00000001165) CNOT9 (ENSBGRG00000001130) PLCD4 (ENSBGRG00000001098) ENSBGRG00000001065 BCS1L (ENSBGRG00000001040) RNF25 (ENSBGRG00000001002) STK36 (ENSBGRG00000000918) TTLL4 (ENSBGRG00000000831) CYP27A1 (ENSBGRG00000000784) PRKAG3 (ENSBGRG00000000724) WNT6 (ENSBGRG00000000692) WNT10A (ENSBGRG00000000672) CDK5R2 (ENSBGRG00000000662) ##22 FEV (ENSBGRG00000000650) CRYBA2 (ENSBGRG00000000636) CFAP65 (ENSBGRG00000000510) IHH (ENSBGRG00000000478) ENSBGRG00000000275 CNPPD1 (ENSBGRG00000000191) RETREG2 (ENSBGRG00000000177) ENSBGRG00000000170 ZFAND2B (ENSBGRG00000022252) ABCB6 (ENSBGRG00000021927) ATG9A (ENSBGRG00000021811) ANKZF1 (ENSBGRG00000021721) STK16 (ENSBGRG00000021450) ENSBGRG00000021241 ENSBGRG00000021181 Bos_b ANCESTRAL SPECIES 20 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Hybrid Bos Indicus MODERN SPECIES 11 SLC11A1 (ENSBIXG00005023464) CTDSP1 (ENSBIXG00005023395) VIL1 (ENSBIXG00005023329) USP37 (ENSBIXG00005023268) CNOT9 (ENSBIXG00005023182) PLCD4 (ENSBIXG00005023140) ENSBIXG00005023078 BCS1L (ENSBIXG00005023013) RNF25 (ENSBIXG00005022967) STK36 (ENSBIXG00005022916) TTLL4 (ENSBIXG00005022832) CYP27A1 (ENSBIXG00005022772) PRKAG3 (ENSBIXG00005022713) WNT6 (ENSBIXG00005022659) WNT10A (ENSBIXG00005022642) CDK5R2 (ENSBIXG00005003865) ##22 FEV (ENSBIXG00005022607) CRYBA2 (ENSBIXG00005022597) CFAP65 (ENSBIXG00005022540) IHH (ENSBIXG00005022267) NHEJ1 (ENSBIXG00005022226) SLC23A3 (ENSBIXG00005003774) CNPPD1 (ENSBIXG00005022037) RETREG2 (ENSBIXG00005003713) ZFAND2B (ENSBIXG00005021975) ENSBIXG00005021858 ANKZF1 (ENSBIXG00005021687) GLB1L (ENSBIXG00005021612) STK16 (ENSBIXG00005000014) TUBA4A (ENSBIXG00005021445) ENSBIXG00005021414 Cow MODERN SPECIES 11 SLC11A1 (ENSBTAG00000015520) CTDSP1 (ENSBTAG00000008362) VIL1 (ENSBTAG00000018543) USP37 (ENSBTAG00000016572) CNOT9 (ENSBTAG00000003807) PLCD4 (ENSBTAG00000003809) ZNF142 (ENSBTAG00000026772) BCS1L (ENSBTAG00000003813) RNF25 (ENSBTAG00000003817) STK36 (ENSBTAG00000003819) TTLL4 (ENSBTAG00000018415) CYP27A1 (ENSBTAG00000013489) PRKAG3 (ENSBTAG00000013492) WNT6 (ENSBTAG00000013990) WNT10A (ENSBTAG00000009217) CDK5R2 (ENSBTAG00000031052) ##22 FEV (ENSBTAG00000020191) CRYBA2 (ENSBTAG00000014819) CFAP65 (ENSBTAG00000026751) IHH (ENSBTAG00000008452) NHEJ1 (ENSBTAG00000031041) SLC23A3 (ENSBTAG00000012618) CNPPD1 (ENSBTAG00000012619) RETREG2 (ENSBTAG00000012620) ZFAND2B (ENSBTAG00000020606) ABCB6 (ENSBTAG00000020607) ATG9A (ENSBTAG00000020608) ANKZF1 (ENSBTAG00000020610) GLB1L (ENSBTAG00000020611) STK16 (ENSBTAG00000020613) TUBA4A (ENSBTAG00000030974) Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Carnivora ANCESTRAL SPECIES 17 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Felidae ANCESTRAL SPECIES 15 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Cat MODERN SPECIES 239 SLC11A1 (ENSFCAG00000002377) CTDSP1 (ENSFCAG00000002378) VIL1 (ENSFCAG00000002379) USP37 (ENSFCAG00000002380) CNOT9 (ENSFCAG00000034905) PLCD4 (ENSFCAG00000004152) ENSFCAG00000024599 BCS1L (ENSFCAG00000004154) RNF25 (ENSFCAG00000004155) STK36 (ENSFCAG00000004156) TTLL4 (ENSFCAG00000038954) CYP27A1 (ENSFCAG00000007063) PRKAG3 (ENSFCAG00000007064) WNT6 (ENSFCAG00000043651) WNT10A (ENSFCAG00000044254) CDK5R2 (ENSFCAG00000043220) ##22 FEV (ENSFCAG00000045613) CRYBA2 (ENSFCAG00000007487) CFAP65 (ENSFCAG00000007488) IHH (ENSFCAG00000029276) NHEJ1 (ENSFCAG00000035699) SLC23A3 (ENSFCAG00000007491) RETREG2 (ENSFCAG00000011233) ZFAND2B (ENSFCAG00000011237) ABCB6 (ENSFCAG00000011240) ATG9A (ENSFCAG00000011243) ANKZF1 (ENSFCAG00000011246) GLB1L (ENSFCAG00000011248) STK16 (ENSFCAG00000030820) TUBA4A (ENSFCAG00000038881) TUBA4B (ENSFCAG00000042631) Panthera ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Tiger MODERN SPECIES 240 CATIP (ENSPTIG00000003791) SLC11A1 (ENSPTIG00000006510) CTDSP1 (ENSPTIG00000006919) VIL1 (ENSPTIG00000007734) USP37 (ENSPTIG00000008571) CNOT9 (ENSPTIG00000012383) PLCD4 (ENSPTIG00000014030) ENSPTIG00000018208 BCS1L (ENSPTIG00000019626) RNF25 (ENSPTIG00000020459) STK36 (ENSPTIG00000020784) TTLL4 (ENSPTIG00000021669) CYP27A1 (ENSPTIG00000005452) PRKAG3 (ENSPTIG00000006300) WNT10A (ENSPTIG00000006806) ENSPTIG00000005440 ##22 CRYBA2 (ENSPTIG00000007397) CFAP65 (ENSPTIG00000008075) ENSPTIG00000013562 NHEJ1 (ENSPTIG00000014677) SLC23A3 (ENSPTIG00000015352) CNPPD1 (ENSPTIG00000015930) RETREG2 (ENSPTIG00000016225) ZFAND2B (ENSPTIG00000017139) ABCB6 (ENSPTIG00000019628) ATG9A (ENSPTIG00000019791) ANKZF1 (ENSPTIG00000020141) GLB1L (ENSPTIG00000020431) STK16 (ENSPTIG00000021342) TUBA4A (ENSPTIG00000021758) TUBA4B (ENSPTIG00000002566) Panthera_a ANCESTRAL SPECIES 6 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a leopard MODERN SPECIES 12 ENSPPRG00000000614 VIL1 (ENSPPRG00000000854) USP37 (ENSPPRG00000002413) CNOT9 (ENSPPRG00000002827) PLCD4 (ENSPPRG00000003858) ENSPPRG00000004287 BCS1L (ENSPPRG00000005159) RNF25 (ENSPPRG00000005371) STK36 (ENSPPRG00000006965) TTLL4 (ENSPPRG00000008390) ENSPPRG00000008414 CYP27A1 (ENSPPRG00000008560) PRKAG3 (ENSPPRG00000008754) WNT6 (ENSPPRG00000008814) WNT10A (ENSPPRG00000008877) CDK5R2 (ENSPPRG00000022058) ##22 FEV (ENSPPRG00000009437) CRYBA2 (ENSPPRG00000009580) CFAP65 (ENSPPRG00000012363) IHH (ENSPPRG00000012622) NHEJ1 (ENSPPRG00000012808) SLC23A3 (ENSPPRG00000013147) CNPPD1 (ENSPPRG00000013483) RETREG2 (ENSPPRG00000013844) ZFAND2B (ENSPPRG00000015562) ABCB6 (ENSPPRG00000016666) ATG9A (ENSPPRG00000018424) ANKZF1 (ENSPPRG00000018883) GLB1L (ENSPPRG00000020047) STK16 (ENSPPRG00000025038) TUBA4A (ENSPPRG00000025015) lion MODERN SPECIES 8 SLC11A1 (ENSPLOG00000020625) CTDSP1 (ENSPLOG00000020517) VIL1 (ENSPLOG00000020362) USP37 (ENSPLOG00000020198) CNOT9 (ENSPLOG00000020058) PLCD4 (ENSPLOG00000019831) ZNF142 (ENSPLOG00000019762) BCS1L (ENSPLOG00000019725) RNF25 (ENSPLOG00000019651) STK36 (ENSPLOG00000019317) TTLL4 (ENSPLOG00000018947) CYP27A1 (ENSPLOG00000018821) PRKAG3 (ENSPLOG00000018692) WNT6 (ENSPLOG00000018620) WNT10A (ENSPLOG00000018566) CDK5R2 (ENSPLOG00000018482) ##22 FEV (ENSPLOG00000018437) CRYBA2 (ENSPLOG00000018385) ENSPLOG00000018325 IHH (ENSPLOG00000018217) NHEJ1 (ENSPLOG00000018152) ENSPLOG00000017778 RETREG2 (ENSPLOG00000017697) ZFAND2B (ENSPLOG00000017307) ABCB6 (ENSPLOG00000016975) ATG9A (ENSPLOG00000016864) ANKZF1 (ENSPLOG00000016796) GLB1L (ENSPLOG00000016479) STK16 (ENSPLOG00000016322) TUBA4A (ENSPLOG00000016209) ENSPLOG00000016178 Caniformia ANCESTRAL SPECIES 14 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Canidae ANCESTRAL SPECIES 20 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Red fox MODERN SPECIES 39 CTDSP1 (ENSVVUG00000005695) VIL1 (ENSVVUG00000004095) TMA7 (ENSVVUG00000003985) USP37 (ENSVVUG00000003502) CNOT9 (ENSVVUG00000003469) PLCD4 (ENSVVUG00000003179) ENSVVUG00000003097 BCS1L (ENSVVUG00000003071) RNF25 (ENSVVUG00000002796) STK36 (ENSVVUG00000002330) TTLL4 (ENSVVUG00000001146) CYP27A1 (ENSVVUG00000001035) PRKAG3 (ENSVVUG00000000989) WNT6 (ENSVVUG00000000977) WNT10A (ENSVVUG00000000971) CDK5R2 (ENSVVUG00000000932) ##22 CRYBA2 (ENSVVUG00000000927) CFAP65 (ENSVVUG00000000403) IHH (ENSVVUG00000000214) ENSVVUG00000000136 NHEJ1 (ENSVVUG00000025797) SLC23A3 (ENSVVUG00000025794) CNPPD1 (ENSVVUG00000025793) RETREG2 (ENSVVUG00000025791) ZFAND2B (ENSVVUG00000025788) ABCB6 (ENSVVUG00000025784) ATG9A (ENSVVUG00000025782) ANKZF1 (ENSVVUG00000025776) GLB1L (ENSVVUG00000025774) STK16 (ENSVVUG00000025772) TUBA4A (ENSVVUG00000025771) Canis_lupus ANCESTRAL SPECIES 32 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Dingo MODERN SPECIES 398 CTDSP1 (ENSCAFG00020027080) VIL1 (ENSCAFG00020027076) USP37 (ENSCAFG00020027067) CNOT9 (ENSCAFG00020027062) PLCD4 (ENSCAFG00020027058) ENSCAFG00020027052 BCS1L (ENSCAFG00020027051) RNF25 (ENSCAFG00020027049) ENSCAFG00020027048 ENSCAFG00020027047 TTLL4 (ENSCAFG00020027046) CYP27A1 (ENSCAFG00020027045) PRKAG3 (ENSCAFG00020027043) WNT6 (ENSCAFG00020027041) WNT10A (ENSCAFG00020027039) CDK5R2 (ENSCAFG00020027038) ##22 FEV (ENSCAFG00020027037) CRYBA2 (ENSCAFG00020027036) CFAP65 (ENSCAFG00020027029) IHH (ENSCAFG00020027025) NHEJ1 (ENSCAFG00020027023) SLC23A3 (ENSCAFG00020027019) CNPPD1 (ENSCAFG00020027017) RETREG2 (ENSCAFG00020027014) ZFAND2B (ENSCAFG00020027013) ABCB6 (ENSCAFG00020027012) ATG9A (ENSCAFG00020027011) ANKZF1 (ENSCAFG00020027006) GLB1L (ENSCAFG00020027003) STK16 (ENSCAFG00020027001) TUBA4A (ENSCAFG00020027000) Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Ursidae ANCESTRAL SPECIES 7 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299.j ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306.b ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Ursus ANCESTRAL SPECIES 12 ENSGT00940000154101.a ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000160299.j ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306.b ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a American black bear MODERN SPECIES 4367 WNT10A (ENSUAMG00000014529) ENSUAMG00000014530 ##22 FEV (ENSUAMG00000014531) Polar bear MODERN SPECIES 169 CATIP (ENSUMAG00000019632) SLC11A1 (ENSUMAG00000019626) ENSUMAG00000019623 VIL1 (ENSUMAG00000019612) USP37 (ENSUMAG00000019569) CNOT9 (ENSUMAG00000019561) PLCD4 (ENSUMAG00000019526) ENSUMAG00000019512 BCS1L (ENSUMAG00000019508) RNF25 (ENSUMAG00000019502) STK36 (ENSUMAG00000019490) TTLL4 (ENSUMAG00000019111) CYP27A1 (ENSUMAG00000019085) PRKAG3 (ENSUMAG00000019077) WNT10A (ENSUMAG00000019072) ENSUMAG00000019064 ##22 CRYBA2 (ENSUMAG00000019060) CFAP65 (ENSUMAG00000019016) ENSUMAG00000019009 NHEJ1 (ENSUMAG00000019002) SLC23A3 (ENSUMAG00000018986) CNPPD1 (ENSUMAG00000018974) RETREG2 (ENSUMAG00000018947) ZFAND2B (ENSUMAG00000018934) ABCB6 (ENSUMAG00000018819) ATG9A (ENSUMAG00000018800) ANKZF1 (ENSUMAG00000018788) GLB1L (ENSUMAG00000018776) STK16 (ENSUMAG00000018767) TUBA4A (ENSUMAG00000018763) ENSUMAG00000018744 Mustelinae ANCESTRAL SPECIES 35 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a American mink MODERN SPECIES 15 SLC11A1 (ENSNVIG00000022328) CTDS1 (ENSNVIG00000022342) VIL1 (ENSNVIG00000022355) USP37 (ENSNVIG00000022378) CNOT9 (ENSNVIG00000022486) PLCD4 (ENSNVIG00000022510) ENSNVIG00000022533 BCS1 (ENSNVIG00000022539) RNF25 (ENSNVIG00000022548) STK36 (ENSNVIG00000022555) TTLL4 (ENSNVIG00000022578) CYP27A1 (ENSNVIG00000022659) PRKAG3 (ENSNVIG00000022666) WNT6 (ENSNVIG00000022672) WNT10A (ENSNVIG00000022675) CDK5R2 (ENSNVIG00000022677) ##22 FEV (ENSNVIG00000022682) CRYBA2 (ENSNVIG00000022687) CFAP65 (ENSNVIG00000022699) IHH (ENSNVIG00000022725) NHEJ1 (ENSNVIG00000022726) CNPD1 (ENSNVIG00000022734) RETREG2 (ENSNVIG00000022763) ZFAND2B (ENSNVIG00000022772) ABCB6 (ENSNVIG00000022778) ATG9A (ENSNVIG00000022789) ANKZF1 (ENSNVIG00000022799) GLB1L (ENSNVIG00000022812) STK16 (ENSNVIG00000022823) TUBA4A (ENSNVIG00000022841) ENSNVIG00000022848 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Equus ANCESTRAL SPECIES 51 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Donkey MODERN SPECIES 10 SLC11A1 (ENSEASG00005012373) CTDSP1 (ENSEASG00005012367) VIL1 (ENSEASG00005012350) USP37 (ENSEASG00005012329) CNOT9 (ENSEASG00005012317) ENSEASG00005012281 BCS1L (ENSEASG00005012277) RNF25 (ENSEASG00005012269) STK36 (ENSEASG00005012230) ENSEASG00005029569 TTLL4 (ENSEASG00005012028) CYP27A1 (ENSEASG00005011961) PRKAG3 (ENSEASG00005011895) WNT6 (ENSEASG00005011874) WNT10A (ENSEASG00005011873) CDK5R2 (ENSEASG00005033666) ##22 FEV (ENSEASG00005013506) CRYBA2 (ENSEASG00005011870) CFAP65 (ENSEASG00005011849) IHH (ENSEASG00005024990) NHEJ1 (ENSEASG00005011836) ENSEASG00005011833 CNPPD1 (ENSEASG00005011830) RETREG2 (ENSEASG00005011827) ZFAND2B (ENSEASG00005011813) ABCB6 (ENSEASG00005011803) ATG9A (ENSEASG00005011798) ANKZF1 (ENSEASG00005011794) GLB1L (ENSEASG00005011651) STK16 (ENSEASG00005011785) TUBA4A (ENSEASG00005025964) Horse MODERN SPECIES 27 SLC11A1 (ENSECAG00000015807) CTDSP1 (ENSECAG00000008950) VIL1 (ENSECAG00000010006) USP37 (ENSECAG00000018200) CNOT9 (ENSECAG00000059139) PLCD4 (ENSECAG00000012582) ZNF142 (ENSECAG00000017751) BCS1L (ENSECAG00000000224) RNF25 (ENSECAG00000009063) STK36 (ENSECAG00000010391) TTLL4 (ENSECAG00000049252) CYP27A1 (ENSECAG00000019737) PRKAG3 (ENSECAG00000002430) WNT6 (ENSECAG00000013092) WNT10A (ENSECAG00000037351) CDK5R2 (ENSECAG00000006781) ##22 FEV (ENSECAG00000016026) CRYBA2 (ENSECAG00000015100) CFAP65 (ENSECAG00000019457) IHH (ENSECAG00000003802) NHEJ1 (ENSECAG00000030989) CNPPD1 (ENSECAG00000010050) RETREG2 (ENSECAG00000013944) ZFAND2B (ENSECAG00000014958) ABCB6 (ENSECAG00000016378) ATG9A (ENSECAG00000007801) ANKZF1 (ENSECAG00000016473) GLB1L (ENSECAG00000003253) STK16 (ENSECAG00000014093) TUBA4A (ENSECAG00000033788) ENSECAG00000030595 Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Megabat MODERN SPECIES 1809 SLC11A1 (ENSPVAG00000017144) CTDSP1 (ENSPVAG00000017147) VIL1 (ENSPVAG00000017149) USP37 (ENSPVAG00000017151) CNOT9 (ENSPVAG00000017152) PLCD4 (ENSPVAG00000017153) ENSPVAG00000017154 BCS1L (ENSPVAG00000017155) RNF25 (ENSPVAG00000017156) STK36 (ENSPVAG00000017158) TTLL4 (ENSPVAG00000017160) CYP27A1 (ENSPVAG00000017165) PRKAG3 (ENSPVAG00000017167) WNT6 (ENSPVAG00000017168) WNT10A (ENSPVAG00000017170) CDK5R2 (ENSPVAG00000017171) ##22 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00990000213248 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 Greater horseshoe bat MODERN SPECIES 26 SLC11A1 (ENSRFEG00010011285) CTDSP1 (ENSRFEG00010011217) VIL1 (ENSRFEG00010011035) USP37 (ENSRFEG00010010894) CNOT9 (ENSRFEG00010010828) PLCD4 (ENSRFEG00010010727) ENSRFEG00010010661 BCS1L (ENSRFEG00010010532) RNF25 (ENSRFEG00010010472) STK36 (ENSRFEG00010009998) TTLL4 (ENSRFEG00010009497) CYP27A1 (ENSRFEG00010009435) PRKAG3 (ENSRFEG00010009316) WNT6 (ENSRFEG00010009291) WNT10A (ENSRFEG00010009243) CDK5R2 (ENSRFEG00010009228) ##22 FEV (ENSRFEG00010009194) CRYBA2 (ENSRFEG00010009131) CFAP65 (ENSRFEG00010008702) IHH (ENSRFEG00010008660) SLC23A3 (ENSRFEG00010008570) CNPPD1 (ENSRFEG00010008485) RETREG2 (ENSRFEG00010008345) ZFAND2B (ENSRFEG00010008179) ABCB6 (ENSRFEG00010007824) ATG9A (ENSRFEG00010007760) ANKZF1 (ENSRFEG00010007709) GLB1L (ENSRFEG00010007619) STK16 (ENSRFEG00010007354) TUBA4A (ENSRFEG00010007280) ENSRFEG00010007228 Microbat MODERN SPECIES 940 AAMP (ENSMLUG00000004115) ENSMLUG00000027073 TMBIM1 (ENSMLUG00000004137) PNKD (ENSMLUG00000004125) CNOT9 (ENSMLUG00000001502) PLCD4 (ENSMLUG00000001505) RNF25 (ENSMLUG00000001521) ENSMLUG00000001511 BCS1L (ENSMLUG00000001520) STK36 (ENSMLUG00000001524) TTLL4 (ENSMLUG00000007509) CYP27A1 (ENSMLUG00000004097) PRKAG3 (ENSMLUG00000004110) WNT6 (ENSMLUG00000011087) WNT10A (ENSMLUG00000011090) CDK5R2 (ENSMLUG00000011393) ##22 FEV (ENSMLUG00000011400) CRYBA2 (ENSMLUG00000011404) CFAP65 (ENSMLUG00000011424) IHH (ENSMLUG00000011503) ENSMLUG00000026660 NHEJ1 (ENSMLUG00000024087) SLC23A3 (ENSMLUG00000011517) CNPPD1 (ENSMLUG00000023687) RETREG2 (ENSMLUG00000022407) ZFAND2B (ENSMLUG00000007983) ABCB6 (ENSMLUG00000029153) ENSMLUG00000008013 ANKZF1 (ENSMLUG00000008036) GLB1L (ENSMLUG00000023103) STK16 (ENSMLUG00000008066) Atlantogenata ANCESTRAL SPECIES 9 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163279 ENSGT00390000005415 ENSGT00390000001557 ENSGT00940000158375 ENSGT00940000157916 ENSGT00950000182905.a.a.a.a.b ENSGT00950000183019.f.b.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a ##22 ENSGT00940000161562 ENSGT00940000160306 ENSGT00430000031142 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00390000000862 ENSGT00940000162511 ENSGT00940000159648 ENSGT00940000156160 ENSGT00390000014839.b ENSGT00390000005911 ENSGT00950000182942.a.b ENSGT00550000075037 ENSGT00950000183165.a Elephant MODERN SPECIES 301 SLC11A1 (ENSLAFG00000001570) CTDSP1 (ENSLAFG00000023374) VIL1 (ENSLAFG00000026446) USP37 (ENSLAFG00000015247) CNOT9 (ENSLAFG00000012288) PLCD4 (ENSLAFG00000012296) ENSLAFG00000012305 BCS1L (ENSLAFG00000012315) RNF25 (ENSLAFG00000012317) STK36 (ENSLAFG00000012325) TTLL4 (ENSLAFG00000017623) CYP27A1 (ENSLAFG00000017636) PRKAG3 (ENSLAFG00000015976) WNT6 (ENSLAFG00000017647) WNT10A (ENSLAFG00000012543) CDK5R2 (ENSLAFG00000028414) ##22 FEV (ENSLAFG00000030729) CRYBA2 (ENSLAFG00000008088) CFAP65 (ENSLAFG00000017651) IHH (ENSLAFG00000010467) SLC23A3 (ENSLAFG00000008216) CNPPD1 (ENSLAFG00000008222) RETREG2 (ENSLAFG00000008223) ZFAND2B (ENSLAFG00000009026) ABCB6 (ENSLAFG00000009030) ATG9A (ENSLAFG00000009034) ANKZF1 (ENSLAFG00000009039) GLB1L (ENSLAFG00000009043) STK16 (ENSLAFG00000009050) TUBA4A (ENSLAFG00000009054) ENSLAFG00000030536 Platypus MODERN SPECIES SLC11A1 (ENSOANG00000007050) CTDSP1 (ENSOANG00000038979) VIL1 (ENSOANG00000043969) USP37 (ENSOANG00000040621) CNOT9 (ENSOANG00000042732) PLCD4 (ENSOANG00000039189) ZNF142 (ENSOANG00000040583) BCS1L (ENSOANG00000039658) ENSOANG00000043201 ENSOANG00000037967 TTLL4 (ENSOANG00000050326) PRKAG3 (ENSOANG00000043719) CYP27A1 (ENSOANG00000009475) WNT6 (ENSOANG00000048371) WNT10A (ENSOANG00000036463) CDK5R2 (ENSOANG00000049742) ##22 FEV (ENSOANG00000045544) CRYBA2 (ENSOANG00000041884) ENSOANG00000045363 IHH (ENSOANG00000049852) ENSOANG00000048378 ENSOANG00000037778 ENSOANG00000049893 GLB1L (ENSOANG00000041073) ENSOANG00000038987 TUBA4A (ENSOANG00000007702) ENSOANG00000038452 ENSOANG00000037507 DNPEP (ENSOANG00000043343) DES (ENSOANG00000044923) ENSOANG00000048574 Anura DUPLICATION Anura ANCESTRAL SPECIES 41 ENSGT00940000158887 ENSGT00940000154101.a ENSGT00940000160799 ENSGT01040000240451.a.a ENSGT00940000160544 ENSGT00940000158091 ENSGT00390000001225 ENSGT00940000156180 ENSGT00940000163074 ENSGT00390000005415 ENSGT00950000182905.a.a.a.a.b.b ENSGT00950000182905.a.a.a.a.b.a.a ENSGT00950000182905.a.a.a.a.b.a.b ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.c ##22 ENSGT00940000161562 ENSGT00430000031142 ENSGT00940000164719 ENSGT00940000159207 ENSGT00390000009940 ENSGT00950000182953.A ENSGT00950000183019.f.b.b ENSGT00940000157916 ENSGT00390000000862 ENSGT00940000156160 ENSGT00940000164110 ENSGT00940000159052 ENSGT00940000154610.e.a ENSGT00940000157018 ENSGT01030000234748 Leishan spiny toad MODERN SPECIES 10 BCS1L (ENSLLEG00000015574) ZNF142 (ENSLLEG00000015806) PLCD4 (ENSLLEG00000015894) ENSLLEG00000016121 CNOT9 (ENSLLEG00000016152) USP37 (ENSLLEG00000016557) ENSLLEG00000016985 ENSLLEG00000017106 ENSLLEG00000017199 ENSLLEG00000017283 ENSLLEG00000017385 WNT6 (ENSLLEG00000017419) ENSLLEG00000017474 WNT10A (ENSLLEG00000017506) ENSLLEG00000017586 CDK5R2 (ENSLLEG00000017606) ##22 ENSLLEG00000017645 CRYBA2 (ENSLLEG00000017668) FEV (ENSLLEG00000017799) ENSLLEG00000017900 ENSLLEG00000018807 IHH (ENSLLEG00000018841) NHEJ1 (ENSLLEG00000018925) ENSLLEG00000019027 ENSLLEG00000019488 ENSLLEG00000019551 ENSLLEG00000020071 ENSLLEG00000020087 ABCB6 (ENSLLEG00000020202) ENSLLEG00000020564 ENSLLEG00000020577 Frog MODERN SPECIES 9 XB5731801 [provisional] (ENSXETG00000025029) slc11a1 (ENSXETG00000014937) ctdsp1 (ENSXETG00000041437) vil1 (ENSXETG00000014965) usp37 (ENSXETG00000014977) cnot9 (ENSXETG00000014984) plcd4 (ENSXETG00000013830) znf142 (ENSXETG00000035207) bcs1l (ENSXETG00000013844) cyp27a1.3 (ENSXETG00000039601) grsf1 (ENSXETG00000013850) XB1001094 [provisional:cyp27a1] (ENSXETG00000038396) XB984297 [provisional:cyp27a1] (ENSXETG00000013846) wnt6 (ENSXETG00000045993) wnt10a (ENSXETG00000048038) cdk5r2 (ENSXETG00000039048) ##22 fev (ENSXETG00000033826) cryba2 (ENSXETG00000013865) cfap65 (ENSXETG00000013869) ENSXETG00000040115 ihh (ENSXETG00000038561) nhej1 (ENSXETG00000025012) slc23a3 (ENSXETG00000013878) prkag3 (ENSXETG00000013879) ttll4 (ENSXETG00000013887) cnppd1 (ENSXETG00000042782) abcb6 (ENSXETG00000013892) retreg2 (ENSXETG00000013896) asic4 (ENSXETG00000042138) racgap1.2 (ENSXETG00000031009) gmppa (ENSXETG00000019242) Anura ANCESTRAL SPECIES ENSGT00390000008812.a.d ##22 Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 2 ENSLLEG00000024734 ENSLLEG00000024759 FFAR2 (ENSLLEG00000024788) ENSLLEG00000024807 ENSLLEG00000024892 ENSLLEG00000025121 ENSLLEG00000025288 ENSLLEG00000025322 ENSLLEG00000025386 ENSLLEG00000025493 ENSLLEG00000025756 ENSLLEG00000025795 ENSLLEG00000025830 ENSLLEG00000026059 ENSLLEG00000026129 ENSLLEG00000026360 ##22 ENSLLEG00000026396 ENSLLEG00000026444 ENSLLEG00000026492 ENSLLEG00000026511 ENSLLEG00000026530 ENSLLEG00000026573 ENSLLEG00000026616 ENSLLEG00000026696 ENSLLEG00000026910 ENSLLEG00000026942 ENSLLEG00000027025 ENSLLEG00000027262 ENSLLEG00000027468 ENSLLEG00000027501 ENSLLEG00000027651 Leishan spiny toad MODERN SPECIES 7 IRAK1BP1 (ENSLLEG00000030603) PHIP (ENSLLEG00000030637) ENSLLEG00000030677 HMGN3 (ENSLLEG00000030682) ENSLLEG00000030691 LCA5 (ENSLLEG00000030704) SH3BGRL2 (ENSLLEG00000030727) ENSLLEG00000014488 ENSLLEG00000014621 ELOVL4 (ENSLLEG00000017174) TTK (ENSLLEG00000017246) ENSLLEG00000017431 ENSLLEG00000017457 BCKDHB (ENSLLEG00000017490) ENSLLEG00000017816 ENSLLEG00000017835 ##22 ENSLLEG00000017853 ENSLLEG00000017867 TENT5A (ENSLLEG00000017887) IBTK (ENSLLEG00000017938) ENSLLEG00000018480 TPBG (ENSLLEG00000018509) ENSLLEG00000018525 ENSLLEG00000018563 UBE3D (ENSLLEG00000018615) ENSLLEG00000018949 DOP1A (ENSLLEG00000018994) ME1 (ENSLLEG00000019831) RWDD2A (ENSLLEG00000020371) ENSLLEG00000020413 PRSS35 (ENSLLEG00000020444)