Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00950000185166	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Primates	ANCESTRAL SPECIES	13	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00950000185166	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225.m #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Cebidae	ANCESTRAL SPECIES	11	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225.m #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Marmoset	MODERN SPECIES	18	VIL1 (ENSCJAG00000010950) #7	USP37 (ENSCJAG00000010983) #8	CNOT9 (ENSCJAG00000011079) #9	PLCD4 (ENSCJAG00000038890) #10	ZNF142 (ENSCJAG00000011145) #11	BCS1L (ENSCJAG00000011149) #12	RNF25 (ENSCJAG00000011192) #13	STK36 (ENSCJAG00000011237) #14	ENSCJAG00000073749 #15	TTLL4 (ENSCJAG00000011294) #16	CYP27A1 (ENSCJAG00000011342) #17	ENSCJAG00000083160 #18	PRKAG3 (ENSCJAG00000011362) #19	WNT6 (ENSCJAG00000011399) #20	WNT10A (ENSCJAG00000011403) #21	CDK5R2 (ENSCJAG00000084028) #22	FEV (ENSCJAG00000070578) #23	CRYBA2 (ENSCJAG00000011426) #24	CFAP65 (ENSCJAG00000011429) #25	IHH (ENSCJAG00000046454) #26	NHEJ1 (ENSCJAG00000011471) #27	SLC23A3 (ENSCJAG00000011478) #28	CNPPD1 (ENSCJAG00000011492) #29	RETREG2 (ENSCJAG00000046567) #30	ENSCJAG00000047609 #31	ZFAND2B (ENSCJAG00000011503) #32	ABCB6 (ENSCJAG00000011512) #33	ATG9A (ENSCJAG00000011523) #34	ANKZF1 (ENSCJAG00000011574) #35	GLB1L (ENSCJAG00000011433) #36	STK16 (ENSCJAG00000011592) #37
Cebidae_a	ANCESTRAL SPECIES	16	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225.m #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Bolivian squirrel monkey	MODERN SPECIES	56	VIL1 (ENSSBOG00000031003) #7	USP37 (ENSSBOG00000019926) #8	ENSSBOG00000022872 #9	PLCD4 (ENSSBOG00000033997) #10	ZNF142 (ENSSBOG00000024040) #11	BCS1L (ENSSBOG00000031182) #12	RNF25 (ENSSBOG00000020870) #13	STK36 (ENSSBOG00000032303) #14	TTLL4 (ENSSBOG00000029426) #16	ENSSBOG00000030556	ENSSBOG00000024877	CYP27A1 (ENSSBOG00000035228) #17	PRKAG3 (ENSSBOG00000034985) #19	WNT6 (ENSSBOG00000034349) #20	WNT10A (ENSSBOG00000028713) #21	CDK5R2 (ENSSBOG00000027687) #22	FEV (ENSSBOG00000031391) #23	CRYBA2 (ENSSBOG00000024164) #24	CFAP65 (ENSSBOG00000020612) #25	IHH (ENSSBOG00000018304) #26	NHEJ1 (ENSSBOG00000019236) #27	SLC23A3 (ENSSBOG00000022523) #28	CNPPD1 (ENSSBOG00000024345) #29	RETREG2 (ENSSBOG00000033227) #30	ENSSBOG00000032266 #31	ZFAND2B (ENSSBOG00000026397) #32	ABCB6 (ENSSBOG00000030728) #33	ATG9A (ENSSBOG00000028712) #34	ANKZF1 (ENSSBOG00000022051) #35	GLB1L (ENSSBOG00000026231) #36	STK16 (ENSSBOG00000034683) #37
Capuchin	MODERN SPECIES	91	CTDSP1 (ENSCCAG00000035606)	VIL1 (ENSCCAG00000026608) #7	USP37 (ENSCCAG00000036554) #8	ENSCCAG00000017272 #9	PLCD4 (ENSCCAG00000037074) #10	ZNF142 (ENSCCAG00000025625) #11	RNF25 (ENSCCAG00000022960) #13	BCS1L (ENSCCAG00000030334) #12	STK36 (ENSCCAG00000028077) #14	TTLL4 (ENSCCAG00000033755) #16	CYP27A1 (ENSCCAG00000021874) #17	PRKAG3 (ENSCCAG00000033243) #19	WNT6 (ENSCCAG00000002129) #20	WNT10A (ENSCCAG00000033457) #21	ENSCCAG00000017356	CDK5R2 (ENSCCAG00000017322) #22	FEV (ENSCCAG00000034592) #23	CRYBA2 (ENSCCAG00000033225) #24	CFAP65 (ENSCCAG00000032465) #25	IHH (ENSCCAG00000036432) #26	NHEJ1 (ENSCCAG00000019786) #27	SLC23A3 (ENSCCAG00000021766) #28	CNPPD1 (ENSCCAG00000022297) #29	RETREG2 (ENSCCAG00000022658) #30	ZFAND2B (ENSCCAG00000036928) #32	ABCB6 (ENSCCAG00000027179) #33	ATG9A (ENSCCAG00000020015) #34	ANKZF1 (ENSCCAG00000028113) #35	GLB1L (ENSCCAG00000011525) #36	TUBA4A (ENSCCAG00000028738)	STK16 (ENSCCAG00000024068) #37
Mas night monkey	MODERN SPECIES	357	SLC11A1 (ENSANAG00000038479)	CTDSP1 (ENSANAG00000033831)	VIL1 (ENSANAG00000020565) #7	USP37 (ENSANAG00000031880) #8	ENSANAG00000038509 #9	PLCD4 (ENSANAG00000032428) #10	ZNF142 (ENSANAG00000036961) #11	BCS1L (ENSANAG00000034542) #12	RNF25 (ENSANAG00000029471) #13	STK36 (ENSANAG00000030567) #14	TTLL4 (ENSANAG00000030178) #16	CYP27A1 (ENSANAG00000034366) #17	PRKAG3 (ENSANAG00000032002) #19	WNT6 (ENSANAG00000026110) #20	WNT10A (ENSANAG00000026652) #21	CDK5R2 (ENSANAG00000013180) #22	FEV (ENSANAG00000022907) #23	CRYBA2 (ENSANAG00000030100) #24	CFAP65 (ENSANAG00000026544) #25	IHH (ENSANAG00000038500) #26	NHEJ1 (ENSANAG00000034155) #27	SLC23A3 (ENSANAG00000031993) #28	CNPPD1 (ENSANAG00000024334) #29	ENSANAG00000025113	ZFAND2B (ENSANAG00000008091) #32	ABCB6 (ENSANAG00000032665) #33	ATG9A (ENSANAG00000031038) #34	ANKZF1 (ENSANAG00000033345) #35	GLB1L (ENSANAG00000019491) #36	STK16 (ENSANAG00000036764) #37	TUBA4A (ENSANAG00000028048)
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Rhinopithecus	ANCESTRAL SPECIES	84	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225.k #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037.k #37	ENSGT00950000183165.a
Black snub-nosed monkey	MODERN SPECIES	1865	CTDSP1 (ENSRBIG00000042754)	VIL1 (ENSRBIG00000044160) #7	USP37 (ENSRBIG00000031381) #8	CNOT9 (ENSRBIG00000042739) #9	PLCD4 (ENSRBIG00000028935) #10	ZNF142 (ENSRBIG00000029685) #11	BCS1L (ENSRBIG00000004869) #12	RNF25 (ENSRBIG00000031654) #13	STK36 (ENSRBIG00000031646) #14	TTLL4 (ENSRBIG00000032517) #16	ENSRBIG00000036284	CYP27A1 (ENSRBIG00000032606) #17	PRKAG3 (ENSRBIG00000007017) #19	WNT6 (ENSRBIG00000007103) #20	WNT10A (ENSRBIG00000045014) #21	CDK5R2 (ENSRBIG00000000138) #22	FEV (ENSRBIG00000045018) #23	CRYBA2 (ENSRBIG00000045013) #24	CFAP65 (ENSRBIG00000003141) #25	IHH (ENSRBIG00000041034) #26	NHEJ1 (ENSRBIG00000043995) #27	SLC23A3 (ENSRBIG00000034617) #28	CNPPD1 (ENSRBIG00000039903) #29	RETREG2 (ENSRBIG00000038957) #30	ZFAND2B (ENSRBIG00000034393) #32	ABCB6 (ENSRBIG00000038255) #33	ATG9A (ENSRBIG00000026492) #34	ANKZF1 (ENSRBIG00000038988) #35	GLB1L (ENSRBIG00000034384) #36	ENSRBIG00000028232 #37	ENSRBIG00000040754
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Vervet Monkey	MODERN SPECIES	1	SLC11A1 (ENSCSAG00000008860)	CTDSP1 (ENSCSAG00000008845)	VIL1 (ENSCSAG00000008837) #7	USP37 (ENSCSAG00000008823) #8	CNOT9 (ENSCSAG00000008806) #9	PLCD4 (ENSCSAG00000008792) #10	ZNF142 (ENSCSAG00000008779) #11	BCS1L (ENSCSAG00000008774) #12	RNF25 (ENSCSAG00000008769) #13	STK36 (ENSCSAG00000008730) #14	TTLL4 (ENSCSAG00000008654) #16	CYP27A1 (ENSCSAG00000008643) #17	PRKAG3 (ENSCSAG00000008637) #19	WNT6 (ENSCSAG00000008630) #20	WNT10A (ENSCSAG00000008612) #21	CDK5R2 (ENSCSAG00000018779) #22	FEV (ENSCSAG00000008586) #23	CRYBA2 (ENSCSAG00000008573) #24	CFAP65 (ENSCSAG00000008506) #25	IHH (ENSCSAG00000008404) #26	NHEJ1 (ENSCSAG00000008380) #27	SLC23A3 (ENSCSAG00000008344) #28	CNPPD1 (ENSCSAG00000008316) #29	RETREG2 (ENSCSAG00000008270) #30	ZFAND2B (ENSCSAG00000008239) #32	ABCB6 (ENSCSAG00000008232) #33	ATG9A (ENSCSAG00000008219) #34	ANKZF1 (ENSCSAG00000008195) #35	GLB1L (ENSCSAG00000008146) #36	STK16 (ENSCSAG00000008105) #37	TUBA4A (ENSCSAG00000008100)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375.w.a #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Macaca	ANCESTRAL SPECIES	15	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375.w.a #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281.v #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Macaca_a	ANCESTRAL SPECIES	17	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375.w.a #14	ENSGT00940000157916 #16	ENSGT01100000263493.a.a.a.b.a.a.b.b.a.a.a.a.b.b	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281.v #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000164110	ENSGT00940000161627.a.a.a.b.a.b.b.a.a.b.b.a.a.a.b	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Rhesus	MODERN SPECIES	3	CATIP (ENSMMUG00000031218)	SLC11A1 (ENSMMUG00000013359)	VIL1 (ENSMMUG00000016899) #7	USP37 (ENSMMUG00000015218) #8	PLCD4 (ENSMMUG00000009626) #10	ZNF142 (ENSMMUG00000006737) #11	BCS1L (ENSMMUG00000006740) #12	RNF25 (ENSMMUG00000006743) #13	STK36 (ENSMMUG00000006744) #14	TTLL4 (ENSMMUG00000006755) #16	ENSMMUG00000049592	CYP27A1 (ENSMMUG00000006758) #17	PRKAG3 (ENSMMUG00000021877) #19	WNT6 (ENSMMUG00000052954) #20	WNT10A (ENSMMUG00000055913) #21	CDK5R2 (ENSMMUG00000031210) #22	FEV (ENSMMUG00000064772) #23	CRYBA2 (ENSMMUG00000064755) #24	CFAP65 (ENSMMUG00000000783) #25	IHH (ENSMMUG00000000785) #26	NHEJ1 (ENSMMUG00000000786) #27	SLC23A3 (ENSMMUG00000000788) #28	CNPPD1 (ENSMMUG00000000791) #29	RETREG2 (ENSMMUG00000000792)	ENSMMUG00000061332	ZFAND2B (ENSMMUG00000019614) #32	ATG9A (ENSMMUG00000019619) #33	ANKZF1 (ENSMMUG00000014510) #35	GLB1L (ENSMMUG00000019624) #36	STK16 (ENSMMUG00000019626) #37	TUBA4A (ENSMMUG00000019628)
Pig-tailed macaque	MODERN SPECIES	570	SLC11A1 (ENSMNEG00000043330)	CTDSP1 (ENSMNEG00000010458)	VIL1 (ENSMNEG00000034956) #7	USP37 (ENSMNEG00000038072) #8	CNOT9 (ENSMNEG00000001265) #9	PLCD4 (ENSMNEG00000028669) #10	ZNF142 (ENSMNEG00000041285) #11	BCS1L (ENSMNEG00000035775) #12	RNF25 (ENSMNEG00000039298) #13	STK36 (ENSMNEG00000041592) #14	TTLL4 (ENSMNEG00000040167) #16	CYP27A1 (ENSMNEG00000033809) #17	PRKAG3 (ENSMNEG00000037455) #19	WNT6 (ENSMNEG00000031462) #20	WNT10A (ENSMNEG00000043976) #21	CDK5R2 (ENSMNEG00000012704) #22	FEV (ENSMNEG00000044702) #23	CRYBA2 (ENSMNEG00000035350) #24	CFAP65 (ENSMNEG00000037521) #25	IHH (ENSMNEG00000042582) #26	NHEJ1 (ENSMNEG00000030294) #27	SLC23A3 (ENSMNEG00000042866) #28	CNPPD1 (ENSMNEG00000040784) #29	RETREG2 (ENSMNEG00000042950) #30	ZFAND2B (ENSMNEG00000041938) #32	ABCB6 (ENSMNEG00000040783) #33	ATG9A (ENSMNEG00000030084) #34	ANKZF1 (ENSMNEG00000043308) #35	GLB1L (ENSMNEG00000032580) #36	STK16 (ENSMNEG00000044303) #37	TUBA4A (ENSMNEG00000039170)
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375.x #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Olive baboon	MODERN SPECIES	1	CATIP (ENSPANG00000019012)	SLC11A1 (ENSPANG00000012402)	CTDSP1 (ENSPANG00000001099)	VIL1 (ENSPANG00000005751) #7	USP37 (ENSPANG00000021870) #8	ENSPANG00000010870 #10	ENSPANG00000005493 #11	ENSPANG00000010249 #12	ENSPANG00000020343 #13	ENSPANG00000044497 #14	TTLL4 (ENSPANG00000008977) #16	CYP27A1 (ENSPANG00000004702) #17	PRKAG3 (ENSPANG00000000437) #19	WNT6 (ENSPANG00000022973) #20	WNT10A (ENSPANG00000011987) #21	CDK5R2 (ENSPANG00000009421) #22	FEV (ENSPANG00000017464) #23	CRYBA2 (ENSPANG00000021174) #24	CFAP65 (ENSPANG00000030993) #25	IHH (ENSPANG00000017463) #26	NHEJ1 (ENSPANG00000009814) #27	SLC23A3 (ENSPANG00000011561) #28	CNPPD1 (ENSPANG00000018165) #29	RETREG2 (ENSPANG00000007323) #30	ZFAND2B (ENSPANG00000000725) #32	ABCB6 (ENSPANG00000020232) #33	ATG9A (ENSPANG00000017760) #34	ANKZF1 (ENSPANG00000006511) #35	GLB1L (ENSPANG00000010201) #36	STK16 (ENSPANG00000007826) #37	TUBA4A (ENSPANG00000041659)
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375.x #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Sooty mangabey	MODERN SPECIES	663	SLC11A1 (ENSCATG00000018339)	CTDSP1 (ENSCATG00000034995)	VIL1 (ENSCATG00000036175) #7	USP37 (ENSCATG00000023935) #8	CNOT9 (ENSCATG00000045348) #9	PLCD4 (ENSCATG00000033628) #10	ZNF142 (ENSCATG00000044960) #11	BCS1L (ENSCATG00000011743) #12	RNF25 (ENSCATG00000041945) #13	STK36 (ENSCATG00000041467) #14	TTLL4 (ENSCATG00000036114) #16	CYP27A1 (ENSCATG00000021484) #17	PRKAG3 (ENSCATG00000042843) #19	WNT6 (ENSCATG00000034505) #20	WNT10A (ENSCATG00000041079) #21	CDK5R2 (ENSCATG00000021149) #22	FEV (ENSCATG00000042120) #23	CRYBA2 (ENSCATG00000036307) #24	CFAP65 (ENSCATG00000044214) #25	IHH (ENSCATG00000011857) #26	NHEJ1 (ENSCATG00000031316) #27	SLC23A3 (ENSCATG00000032304) #28	CNPPD1 (ENSCATG00000036265) #29	ENSCATG00000038425	ZFAND2B (ENSCATG00000035298) #32	ABCB6 (ENSCATG00000044148) #33	ATG9A (ENSCATG00000037370) #34	ANKZF1 (ENSCATG00000039880) #35	GLB1L (ENSCATG00000039765) #36	ENSCATG00000037306 #37	TUBA4A (ENSCATG00000033332)
Hominoidea	ANCESTRAL SPECIES	15	ENSGT01040000240451.a.a	ENSGT00910000147849	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Gibbon	MODERN SPECIES	14	ENSNLEG00000008612	ENSNLEG00000035866	VIL1 (ENSNLEG00000008619) #7	USP37 (ENSNLEG00000008655) #8	CNOT9 (ENSNLEG00000008737) #9	PLCD4 (ENSNLEG00000008756) #10	ZNF142 (ENSNLEG00000008760) #11	BCS1L (ENSNLEG00000030685) #12	RNF25 (ENSNLEG00000008812) #13	STK36 (ENSNLEG00000008852) #14	TTLL4 (ENSNLEG00000008904) #16	CYP27A1 (ENSNLEG00000008910) #17	PRKAG3 (ENSNLEG00000008942) #19	WNT6 (ENSNLEG00000008977) #20	WNT10A (ENSNLEG00000008992) #21	CDK5R2 (ENSNLEG00000018723) #22	FEV (ENSNLEG00000009001) #23	CRYBA2 (ENSNLEG00000009012) #24	CFAP65 (ENSNLEG00000009025) #25	IHH (ENSNLEG00000009054) #26	NHEJ1 (ENSNLEG00000009056) #27	SLC23A3 (ENSNLEG00000009070) #28	CNPPD1 (ENSNLEG00000034862) #29	RETREG2 (ENSNLEG00000035903) #30	ZFAND2B (ENSNLEG00000009113) #32	ABCB6 (ENSNLEG00000009125) #33	ATG9A (ENSNLEG00000009166) #34	ANKZF1 (ENSNLEG00000009207) #35	GLB1L (ENSNLEG00000009246) #36	STK16 (ENSNLEG00000034331) #37	TUBA4A (ENSNLEG00000027445)
Hominidae	ANCESTRAL SPECIES	17	ENSGT01040000240451.a.a	ENSGT00910000147849	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Orangutan	MODERN SPECIES	15	SLC11A1 (ENSPPYG00000013172)	CTDSP1 (ENSPPYG00000036372)	VIL1 (ENSPPYG00000013174) #7	USP37 (ENSPPYG00000013175) #8	CNOT9 (ENSPPYG00000036751) #9	PLCD4 (ENSPPYG00000013177) #10	ZNF142 (ENSPPYG00000013178) #11	BCS1L (ENSPPYG00000013179) #12	RNF25 (ENSPPYG00000013180) #13	STK36 (ENSPPYG00000013181) #14	TTLL4 (ENSPPYG00000013182) #16	CYP27A1 (ENSPPYG00000013385) #17	PRKAG3 (ENSPPYG00000013184) #19	WNT6 (ENSPPYG00000013185) #20	WNT10A (ENSPPYG00000032996) #21	CDK5R2 (ENSPPYG00000013188) #22	FEV (ENSPPYG00000013189) #23	CRYBA2 (ENSPPYG00000013190) #24	CFAP65 (ENSPPYG00000013191) #25	IHH (ENSPPYG00000033632) #26	NHEJ1 (ENSPPYG00000013193) #27	SLC23A3 (ENSPPYG00000013194) #28	CNPPD1 (ENSPPYG00000013195) #29	ENSPPYG00000013196	ZFAND2B (ENSPPYG00000013197) #32	ABCB6 (ENSPPYG00000013198) #33	ATG9A (ENSPPYG00000013199) #34	ANKZF1 (ENSPPYG00000013200) #35	GLB1L (ENSPPYG00000013201) #36	STK16 (ENSPPYG00000013202) #37	TUBA4A (ENSPPYG00000013203)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT01040000240451.a.a	ENSGT00910000147849	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Gorilla	MODERN SPECIES	15	ENSGGOG00000041563	VIL1 (ENSGGOG00000014322) #7	USP37 (ENSGGOG00000014335) #8	CNOT9 (ENSGGOG00000011091) #9	PLCD4 (ENSGGOG00000011858) #10	ENSGGOG00000024718	BCS1L (ENSGGOG00000001899) #12	RNF25 (ENSGGOG00000001901) #13	ENSGGOG00000043717 #14	ENSGGOG00000001905 #14	TTLL4 (ENSGGOG00000001914) #16	CYP27A1 (ENSGGOG00000003243) #17	PRKAG3 (ENSGGOG00000003249) #19	WNT6 (ENSGGOG00000003259) #20	WNT10A (ENSGGOG00000000870) #21	ENSGGOG00000007771 #22	FEV (ENSGGOG00000010787) #23	CRYBA2 (ENSGGOG00000010794) #24	CFAP65 (ENSGGOG00000010798) #25	ENSGGOG00000041386 #26	NHEJ1 (ENSGGOG00000010822) #27	SLC23A3 (ENSGGOG00000010828) #28	CNPPD1 (ENSGGOG00000010837) #29	RETREG2 (ENSGGOG00000010846) #30	STK16 (ENSGGOG00000010907) #37	TUBA4A (ENSGGOG00000023578)	TUBA4B (ENSGGOG00000040612)	DNAJB2 (ENSGGOG00000010915)	PTPRN (ENSGGOG00000011854)	RESP18 (ENSGGOG00000004296)	DNPEP (ENSGGOG00000003423)
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Human	MODERN SPECIES	11	SLC11A1 (ENSG00000018280)	CTDSP1 (ENSG00000144579)	VIL1 (ENSG00000127831) #7	USP37 (ENSG00000135913) #8	CNOT9 (ENSG00000144580) #9	PLCD4 (ENSG00000115556) #10	ZNF142 (ENSG00000115568) #11	BCS1L (ENSG00000074582) #12	RNF25 (ENSG00000163481) #13	STK36 (ENSG00000163482) #14	TTLL4 (ENSG00000135912) #16	CYP27A1 (ENSG00000135929) #17	PRKAG3 (ENSG00000115592) #19	WNT6 (ENSG00000115596) #20	WNT10A (ENSG00000135925) #21	CDK5R2 (ENSG00000171450) #22	FEV (ENSG00000163497) #23	CRYBA2 (ENSG00000163499) #24	CFAP65 (ENSG00000181378) #25	IHH (ENSG00000163501) #26	NHEJ1 (ENSG00000187736) #27	SLC23A3 (ENSG00000213901) #28	CNPPD1 (ENSG00000115649) #29	RETREG2 (ENSG00000144567) #30	ZFAND2B (ENSG00000158552) #32	ABCB6 (ENSG00000115657) #33	ATG9A (ENSG00000198925) #34	ANKZF1 (ENSG00000163516) #35	GLB1L (ENSG00000163521) #36	STK16 (ENSG00000115661) #37	TUBA4A (ENSG00000127824)
Pan	ANCESTRAL SPECIES	12	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Chimpanzee	MODERN SPECIES	15	SLC11A1 (ENSPTRG00000012917)	CTDSP1 (ENSPTRG00000012918)	VIL1 (ENSPTRG00000012919) #7	USP37 (ENSPTRG00000012920) #8	CNOT9 (ENSPTRG00000012921) #9	PLCD4 (ENSPTRG00000012922) #10	ZNF142 (ENSPTRG00000012923) #11	BCS1L (ENSPTRG00000012924) #12	RNF25 (ENSPTRG00000012925) #13	STK36 (ENSPTRG00000012926) #14	TTLL4 (ENSPTRG00000012927) #16	CYP27A1 (ENSPTRG00000012928) #17	PRKAG3 (ENSPTRG00000012929) #19	WNT6 (ENSPTRG00000045565) #20	WNT10A (ENSPTRG00000012931) #21	CDK5R2 (ENSPTRG00000042910) #22	FEV (ENSPTRG00000045039) #23	CRYBA2 (ENSPTRG00000012934) #24	CFAP65 (ENSPTRG00000012937) #25	IHH (ENSPTRG00000012938) #26	NHEJ1 (ENSPTRG00000034481) #27	SLC23A3 (ENSPTRG00000012940) #28	CNPPD1 (ENSPTRG00000012941) #29	RETREG2 (ENSPTRG00000012942) #30	ZFAND2B (ENSPTRG00000012944) #32	ABCB6 (ENSPTRG00000012945) #33	ATG9A (ENSPTRG00000012943) #34	ANKZF1 (ENSPTRG00000012946) #35	GLB1L (ENSPTRG00000012947) #36	TUBA4A (ENSPTRG00000012949)	STK16 (ENSPTRG00000012948) #37
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT00940000158091 #8	ENSGT00950000185166	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00940000163279	ENSGT00390000005415.a.a ##12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Bushbaby	MODERN SPECIES	128	CTDSP1 (ENSOGAG00000004159)	VIL1 (ENSOGAG00000004160) #7	ENSOGAG00000033815	USP37 (ENSOGAG00000004165) #8	CNOT9 (ENSOGAG00000004173) #9	PLCD4 (ENSOGAG00000004178) #10	ZNF142 (ENSOGAG00000027693) #11	BCS1L (ENSOGAG00000004183) #12	RNF25 (ENSOGAG00000004184) #13	STK36 (ENSOGAG00000004188) #14	TTLL4 (ENSOGAG00000004192) #16	CYP27A1 (ENSOGAG00000004196) #17	PRKAG3 (ENSOGAG00000004200) #19	WNT6 (ENSOGAG00000014075) #20	WNT10A (ENSOGAG00000024185) #21	CDK5R2 (ENSOGAG00000031192) #22	ENSOGAG00000026329	CRYBA2 (ENSOGAG00000014089) #24	CFAP65 (ENSOGAG00000014092) #25	IHH (ENSOGAG00000014108) #26	NHEJ1 (ENSOGAG00000028496) #27	SLC23A3 (ENSOGAG00000015538) #28	CNPPD1 (ENSOGAG00000015540) #29	ENSOGAG00000028216 #30	ZFAND2B (ENSOGAG00000015541) #32	ABCB6 (ENSOGAG00000015544) #33	ATG9A (ENSOGAG00000015549) #34	ANKZF1 (ENSOGAG00000015554) #35	GLB1L (ENSOGAG00000015557) #36	STK16 (ENSOGAG00000015563) #37	TUBA4A (ENSOGAG00000006004)
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00950000185166	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.a.a ##12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Mouse lemur	MODERN SPECIES	30	SLC11A1 (ENSMICG00000032402)	CTDSP1 (ENSMICG00000033882)	VIL1 (ENSMICG00000005119) #7	USP37 (ENSMICG00000005129) #8	CNOT9 (ENSMICG00000005152) #9	PLCD4 (ENSMICG00000005159) #10	ENSMICG00000045688	ENSMICG00000005175 ##12	RNF25 (ENSMICG00000005179) #13	STK36 (ENSMICG00000005186) #14	TTLL4 (ENSMICG00000005204) #16	CYP27A1 (ENSMICG00000006999) #17	PRKAG3 (ENSMICG00000007009) #19	WNT6 (ENSMICG00000045948) #20	WNT10A (ENSMICG00000043872) #21	CDK5R2 (ENSMICG00000007028) #22	FEV (ENSMICG00000047914) #23	CRYBA2 (ENSMICG00000042726) #24	ENSMICG00000007043 #25	IHH (ENSMICG00000026390) #26	NHEJ1 (ENSMICG00000042607) #27	SLC23A3 (ENSMICG00000000765) #28	CNPPD1 (ENSMICG00000000769) #29	ENSMICG00000047782	ZFAND2B (ENSMICG00000000774) #32	ABCB6 (ENSMICG00000000778) #33	ATG9A (ENSMICG00000033556) #34	ANKZF1 (ENSMICG00000000789) #35	GLB1L (ENSMICG00000000795) #36	STK16 (ENSMICG00000000800) #37	TUBA4A (ENSMICG00000035827)
Lemuriformes_a	ANCESTRAL SPECIES	15	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00950000185166	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.a.a ##12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Greater bamboo lemur	MODERN SPECIES	286	CTDSP1 (ENSPSMG00000024799)	VIL1 (ENSPSMG00000024810) #7	ENSPSMG00000024815 #8	ENSPSMG00000024821	CNOT9 (ENSPSMG00000024845) #9	PLCD4 (ENSPSMG00000024883) #10	ENSPSMG00000024891	BCS1L (ENSPSMG00000024908) ##12	RNF25 (ENSPSMG00000024931) #13	STK36 (ENSPSMG00000024959) #14	TTLL4 (ENSPSMG00000025027) #16	CYP27A1 (ENSPSMG00000025068) #17	PRKAG3 (ENSPSMG00000025078) #19	WNT6 (ENSPSMG00000025081) #20	WNT10A (ENSPSMG00000025083) #21	CDK5R2 (ENSPSMG00000025090) #22	FEV (ENSPSMG00000025093) #23	CRYBA2 (ENSPSMG00000025100) #24	ENSPSMG00000025107 #25	IHH (ENSPSMG00000025112) #26	NHEJ1 (ENSPSMG00000025120) #27	SLC23A3 (ENSPSMG00000025130) #28	CNPPD1 (ENSPSMG00000025153) #29	RETREG2 (ENSPSMG00000025165) #30	ZFAND2B (ENSPSMG00000025191) #32	ABCB6 (ENSPSMG00000025233) #33	ATG9A (ENSPSMG00000025253) #34	ANKZF1 (ENSPSMG00000025264) #35	GLB1L (ENSPSMG00000025277) #36	STK16 (ENSPSMG00000025317) #37	TUBA4A (ENSPSMG00000025346)
Coquerels sifaka	MODERN SPECIES	259	SLC11A1 (ENSPCOG00000020402)	CTDSP1 (ENSPCOG00000020126)	VIL1 (ENSPCOG00000002346) #7	USP37 (ENSPCOG00000020172) #8	CNOT9 (ENSPCOG00000026587) #9	PLCD4 (ENSPCOG00000019686) #10	ENSPCOG00000003841	BCS1L (ENSPCOG00000019115) ##12	RNF25 (ENSPCOG00000015285) #13	STK36 (ENSPCOG00000021753) #14	TTLL4 (ENSPCOG00000023937) #16	CYP27A1 (ENSPCOG00000017454) #17	PRKAG3 (ENSPCOG00000020879) #19	WNT6 (ENSPCOG00000016987) #20	WNT10A (ENSPCOG00000027492) #21	CDK5R2 (ENSPCOG00000004726) #22	FEV (ENSPCOG00000026278) #23	CRYBA2 (ENSPCOG00000019254) #24	CFAP65 (ENSPCOG00000022616) #25	IHH (ENSPCOG00000007373) #26	NHEJ1 (ENSPCOG00000026909) #27	SLC23A3 (ENSPCOG00000028411) #28	CNPPD1 (ENSPCOG00000022844) #29	RETREG2 (ENSPCOG00000025318) #30	ZFAND2B (ENSPCOG00000018099) #32	ABCB6 (ENSPCOG00000028584) #33	ATG9A (ENSPCOG00000016102) #34	ANKZF1 (ENSPCOG00000023893) #35	GLB1L (ENSPCOG00000021121) #36	STK16 (ENSPCOG00000028128) #37	TUBA4A (ENSPCOG00000023925)
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Glires	ANCESTRAL SPECIES	14	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Rodentia	ANCESTRAL SPECIES	14	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Kangaroo rat	MODERN SPECIES	320	Ctdsp1 (ENSDORG00000028537)	Vil1 (ENSDORG00000014838) #7	Usp37 (ENSDORG00000014842) #8	Cnot9 (ENSDORG00000029243) #9	Plcd4 (ENSDORG00000004704) #10	ENSDORG00000004707	Bcs1l (ENSDORG00000004709) #12	ENSDORG00000004710 #13	ENSDORG00000023301 #14	ENSDORG00000028722	Ttll4 (ENSDORG00000008314) #16	Cyp27a1 (ENSDORG00000014138) #17	Prkag3 (ENSDORG00000025509) #19	Wnt6 (ENSDORG00000005721) #20	Wnt10a (ENSDORG00000005722) #21	ENSDORG00000024930 #22	Cryba2 (ENSDORG00000002775) #24	Cfap65 (ENSDORG00000002777) #25	Ihh (ENSDORG00000008874) #26	Nhej1 (ENSDORG00000008876) #27	Slc23a3 (ENSDORG00000008878) #28	Cnppd1 (ENSDORG00000030060) #29	Retreg2 (ENSDORG00000008882) #30	Zfand2b (ENSDORG00000000133) #32	Abcb6 (ENSDORG00000000140) #33	Atg9a (ENSDORG00000000146) #34	Ankzf1 (ENSDORG00000000149) #35	ENSDORG00000000150 #36	Stk16 (ENSDORG00000000152) #37	Tuba4a (ENSDORG00000027321)	ENSDORG00000000154
Myomorpha	ANCESTRAL SPECIES	10	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Lesser Egyptian jerboa	MODERN SPECIES	95	ENSJJAG00000000751	Slc11a1 (ENSJJAG00000018654)	Vil1 (ENSJJAG00000017015) #7	Usp37 (ENSJJAG00000012891) #8	ENSJJAG00000001130 #9	Plcd4 (ENSJJAG00000015778) #10	Zfp142 (ENSJJAG00000021558) #11	Bcs1l (ENSJJAG00000015901) #12	ENSJJAG00000015098 #13	ENSJJAG00000011828 #14	ENSJJAG00000022770	Ttll4 (ENSJJAG00000022044) #16	Cyp27a1 (ENSJJAG00000016498) #17	Wnt6 (ENSJJAG00000020656) #20	Wnt10a (ENSJJAG00000019142) #21	ENSJJAG00000018657 #22	Fev (ENSJJAG00000014165) #23	Cryba2 (ENSJJAG00000012188) #24	Cfap65 (ENSJJAG00000021817) #25	Ihh (ENSJJAG00000005159) #26	ENSJJAG00000021485 #27	Slc23a3 (ENSJJAG00000014948) #28	Cnppd1 (ENSJJAG00000019086) #29	Retreg2 (ENSJJAG00000020986) #30	Zfand2b (ENSJJAG00000018956) #32	Abcb6 (ENSJJAG00000021206) #33	Atg9a (ENSJJAG00000010073) #34	Ankzf1 (ENSJJAG00000015085) #35	Glb1l (ENSJJAG00000000273) #36	Stk16 (ENSJJAG00000014287) #37	Tuba4a (ENSJJAG00000011005)
Muroidea	ANCESTRAL SPECIES	20	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1887	Ctdsp1 (ENSNGAG00000008784)	Vil1 (ENSNGAG00000007441) #7	Usp37 (ENSNGAG00000021253) #8	Cnot9 (ENSNGAG00000013140) #9	Plcd4 (ENSNGAG00000023913) #10	ENSNGAG00000023768	Bcs1l (ENSNGAG00000019095) #12	ENSNGAG00000023854 #13	ENSNGAG00000016725 #14	ENSNGAG00000013118	Ttll4 (ENSNGAG00000020292) #16	Cyp27a1 (ENSNGAG00000023395) #17	Prkag3 (ENSNGAG00000007920) #19	Wnt6 (ENSNGAG00000021793) #20	Wnt10a (ENSNGAG00000024234) #21	Cdk5r2 (ENSNGAG00000001353) #22	Fev (ENSNGAG00000022934) #23	Cryba2 (ENSNGAG00000006988) #24	ENSNGAG00000001188 #25	ENSNGAG00000005830	Ihh (ENSNGAG00000023757) #26	Nhej1 (ENSNGAG00000000943) #27	Slc23a3 (ENSNGAG00000005244) #28	ENSNGAG00000015911 #29	Retreg2 (ENSNGAG00000017958) #30	Zfand2b (ENSNGAG00000022561) #32	Abcb6 (ENSNGAG00000014016) #33	Atg9a (ENSNGAG00000012136) #34	Ankzf1 (ENSNGAG00000023378) #35	Glb1l (ENSNGAG00000013262) #36	Stk16 (ENSNGAG00000023432) #37
Muroidea_A	ANCESTRAL SPECIES	19	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Murinae	ANCESTRAL SPECIES	9	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Mus	ANCESTRAL SPECIES	5	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Mus_A	ANCESTRAL SPECIES	5	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Mus_B	ANCESTRAL SPECIES	7	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Mus_C	ANCESTRAL SPECIES	1	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Steppe mouse	MODERN SPECIES	3423	Slc11a1 (ENSMSIG00000019682)	ENSMSIG00000019634	Vil1 (ENSMSIG00000019586) #7	Cnot9 (ENSMSIG00000019555) #9	Usp37 (ENSMSIG00000019436) #8	Plcd4 (ENSMSIG00000019245) #10	Zfp142 (ENSMSIG00000019187) #11	Bcs1l (ENSMSIG00000019168) #12	Rnf25 (ENSMSIG00000019133) #13	Stk36 (ENSMSIG00000018889) #14	Ttll4 (ENSMSIG00000018759) #16	Prkag3 (ENSMSIG00000018678) #19	Cyp27a1 (ENSMSIG00000018644) #17	Wnt6 (ENSMSIG00000018613) #20	Wnt10a (ENSMSIG00000018596) #21	Cdk5r2 (ENSMSIG00000018589) #22	Fev (ENSMSIG00000018578) #23	Cryba2 (ENSMSIG00000018560) #24	Cfap65 (ENSMSIG00000018515) #25	Ihh (ENSMSIG00000018493) #26	Nhej1 (ENSMSIG00000018428) #27	Slc23a3 (ENSMSIG00000018400) #28	Cnppd1 (ENSMSIG00000018370) #29	ENSMSIG00000018356	Zfand2b (ENSMSIG00000018332) #32	Abcb6 (ENSMSIG00000018307) #33	Atg9a (ENSMSIG00000018273) #34	Ankzf1 (ENSMSIG00000018229) #35	Glb1l (ENSMSIG00000018199) #36	Stk16 (ENSMSIG00000018185) #37	Tuba4a (ENSMSIG00000018170)
spretus	MODERN SPECIES		Slc11a1 (MGP_SPRETEiJ_G0015067)	Ctdsp1 (MGP_SPRETEiJ_G0015068)	Vil1 (MGP_SPRETEiJ_G0015069) #7	Usp37 (MGP_SPRETEiJ_G0015070) #8	Cnot9 (MGP_SPRETEiJ_G0015071) #9	Plcd4 (MGP_SPRETEiJ_G0015072) #10	Zfp142 (MGP_SPRETEiJ_G0015073) #11	Bcs1l (MGP_SPRETEiJ_G0015074) #12	Rnf25 (MGP_SPRETEiJ_G0015075) #13	Stk36 (MGP_SPRETEiJ_G0015076) #14	Ttll4 (MGP_SPRETEiJ_G0015077) #16	Cyp27a1 (MGP_SPRETEiJ_G0015078) #17	Prkag3 (MGP_SPRETEiJ_G0015079) #19	Wnt6 (MGP_SPRETEiJ_G0015080) #20	Wnt10a (MGP_SPRETEiJ_G0015081) #21	Cdk5r2 (MGP_SPRETEiJ_G0015082) #22	Fev (MGP_SPRETEiJ_G0015083) #23	Cryba2 (MGP_SPRETEiJ_G0015084) #24	Cfap65 (MGP_SPRETEiJ_G0015085) #25	Ihh (MGP_SPRETEiJ_G0015086) #26	MGP_SPRETEiJ_G0015087 #27	Slc23a3 (MGP_SPRETEiJ_G0015088) #28	Cnppd1 (MGP_SPRETEiJ_G0015089) #29	Retreg2 (MGP_SPRETEiJ_G0015090) #30	Zfand2b (MGP_SPRETEiJ_G0015091) #32	Abcb6 (MGP_SPRETEiJ_G0015092) #33	Atg9a (MGP_SPRETEiJ_G0015093) #34	Ankzf1 (MGP_SPRETEiJ_G0015094) #35	Glb1l (MGP_SPRETEiJ_G0015095) #36	Stk16 (MGP_SPRETEiJ_G0015096) #37	Tuba4a (MGP_SPRETEiJ_G0015097)
Mouse	MODERN SPECIES		Slc11a1 (ENSMUSG00000026177)	Ctdsp1 (ENSMUSG00000026176)	Vil1 (ENSMUSG00000026175) #7	Usp37 (ENSMUSG00000033364) #8	Cnot9 (ENSMUSG00000026174) #9	Plcd4 (ENSMUSG00000026173) #10	Zfp142 (ENSMUSG00000026135) #11	Bcs1l (ENSMUSG00000026172) #12	Rnf25 (ENSMUSG00000026171) #13	Stk36 (ENSMUSG00000033276) #14	Ttll4 (ENSMUSG00000033257) #16	Cyp27a1 (ENSMUSG00000026170) #17	Prkag3 (ENSMUSG00000006542) #19	Wnt6 (ENSMUSG00000033227) #20	Wnt10a (ENSMUSG00000026167) #21	Cdk5r2 (ENSMUSG00000090071) #22	Fev (ENSMUSG00000055197) #23	Cryba2 (ENSMUSG00000006546) #24	Cfap65 (ENSMUSG00000047021) #25	Ihh (ENSMUSG00000006538) #26	Nhej1 (ENSMUSG00000026162) #27	Slc23a3 (ENSMUSG00000026205) #28	Cnppd1 (ENSMUSG00000033159) #29	Retreg2 (ENSMUSG00000049339) #30	Zfand2b (ENSMUSG00000026197) #32	Abcb6 (ENSMUSG00000026198) #33	Atg9a (ENSMUSG00000033124) #34	Ankzf1 (ENSMUSG00000026199) #35	Glb1l (ENSMUSG00000026200) #36	Stk16 (ENSMUSG00000026201) #37	Tuba4a (ENSMUSG00000026202)
Ryukyu mouse	MODERN SPECIES		Slc11a1 (MGP_CAROLIEiJ_G0014261)	Ctdsp1 (MGP_CAROLIEiJ_G0014262)	Vil1 (MGP_CAROLIEiJ_G0014263) #7	Usp37 (MGP_CAROLIEiJ_G0014264) #8	Cnot9 (MGP_CAROLIEiJ_G0014265) #9	Plcd4 (MGP_CAROLIEiJ_G0014266) #10	Zfp142 (MGP_CAROLIEiJ_G0014267) #11	Bcs1l (MGP_CAROLIEiJ_G0014268) #12	Rnf25 (MGP_CAROLIEiJ_G0014269) #13	Stk36 (MGP_CAROLIEiJ_G0014270) #14	Ttll4 (MGP_CAROLIEiJ_G0014271) #16	Cyp27a1 (MGP_CAROLIEiJ_G0014272) #17	Prkag3 (MGP_CAROLIEiJ_G0014273) #19	Wnt6 (MGP_CAROLIEiJ_G0014274) #20	Wnt10a (MGP_CAROLIEiJ_G0014275) #21	Cdk5r2 (MGP_CAROLIEiJ_G0014276) #22	Fev (MGP_CAROLIEiJ_G0014277) #23	Cryba2 (MGP_CAROLIEiJ_G0014278) #24	Cfap65 (MGP_CAROLIEiJ_G0014279) #25	Ihh (MGP_CAROLIEiJ_G0014280) #26	MGP_CAROLIEiJ_G0014281 #27	Slc23a3 (MGP_CAROLIEiJ_G0014282) #28	Cnppd1 (MGP_CAROLIEiJ_G0014283) #29	Retreg2 (MGP_CAROLIEiJ_G0014284) #30	Zfand2b (MGP_CAROLIEiJ_G0014285) #32	Abcb6 (MGP_CAROLIEiJ_G0014286) #33	Atg9a (MGP_CAROLIEiJ_G0014287) #34	Ankzf1 (MGP_CAROLIEiJ_G0014288) #35	Glb1l (MGP_CAROLIEiJ_G0014289) #36	Stk16 (MGP_CAROLIEiJ_G0014290) #37	Tuba4a (MGP_CAROLIEiJ_G0014291)
Shrew mouse	MODERN SPECIES	18	Slc11a1 (MGP_PahariEiJ_G0027499)	Ctdsp1 (MGP_PahariEiJ_G0027500)	Vil1 (MGP_PahariEiJ_G0027501) #7	Usp37 (MGP_PahariEiJ_G0027502) #8	Cnot9 (MGP_PahariEiJ_G0027503) #9	Plcd4 (MGP_PahariEiJ_G0027504) #10	Zfp142 (MGP_PahariEiJ_G0027505) #11	Bcs1l (MGP_PahariEiJ_G0027506) #12	Rnf25 (MGP_PahariEiJ_G0027507) #13	Stk36 (MGP_PahariEiJ_G0027508) #14	Ttll4 (MGP_PahariEiJ_G0027509) #16	Cyp27a1 (MGP_PahariEiJ_G0027510) #17	Prkag3 (MGP_PahariEiJ_G0027511) #19	Wnt6 (MGP_PahariEiJ_G0027512) #20	Wnt10a (MGP_PahariEiJ_G0027513) #21	Cdk5r2 (MGP_PahariEiJ_G0027514) #22	Fev (MGP_PahariEiJ_G0027515) #23	Cryba2 (MGP_PahariEiJ_G0027516) #24	Cfap65 (MGP_PahariEiJ_G0027517) #25	Ihh (MGP_PahariEiJ_G0027518) #26	MGP_PahariEiJ_G0027519 #27	Slc23a3 (MGP_PahariEiJ_G0027520) #28	Cnppd1 (MGP_PahariEiJ_G0027521) #29	Retreg2 (MGP_PahariEiJ_G0027522) #30	Zfand2b (MGP_PahariEiJ_G0027523) #32	Abcb6 (MGP_PahariEiJ_G0027524) #33	Atg9a (MGP_PahariEiJ_G0027525) #34	Ankzf1 (MGP_PahariEiJ_G0027526) #35	Glb1l (MGP_PahariEiJ_G0027527) #36	Stk16 (MGP_PahariEiJ_G0027528) #37	Tuba4a (MGP_PahariEiJ_G0027529)
Rat	MODERN SPECIES	19	Vil1 (ENSRNOG00000015408) #7	Usp37 (ENSRNOG00000022720) #8	Cnot9 (ENSRNOG00000016034) #9	Plcd4 (ENSRNOG00000016361) #10	Zfp142 (ENSRNOG00000022414) #11	Bcs1l (ENSRNOG00000016754) #12	Rnf25 (ENSRNOG00000016886) #13	Stk36 (ENSRNOG00000016913) #14	Ttll4 (ENSRNOG00000017129) #16	Cyp27a1 (ENSRNOG00000017188) #17	Prkag3 (ENSRNOG00000017248) #19	ENSRNOG00000067128	Wnt6 (ENSRNOG00000017409) #20	Wnt10a (ENSRNOG00000052510) #21	AC132020.1 (ENSRNOG00000017757)	Cdk5r2 (ENSRNOG00000037793) #22	Fev (ENSRNOG00000017856) #23	Cryba2 (ENSRNOG00000017996) #24	Cfap65 (ENSRNOG00000056996) #25	Ihh (ENSRNOG00000018059) #26	Nhej1 (ENSRNOG00000018162) #27	AABR07068084.1 (ENSRNOG00000032518)	Slc23a3 (ENSRNOG00000018266) #28	Cnppd1 (ENSRNOG00000018325) #29	Retreg2 (ENSRNOG00000018586) #30	Zfand2b (ENSRNOG00000018639) #32	Abcb6 (ENSRNOG00000018697) #33	Atg9a (ENSRNOG00000018975) #34	Ankzf1 (ENSRNOG00000019052) #35	Glb1l (ENSRNOG00000019243) #36	Stk16 (ENSRNOG00000019294) #37
Cricetidae	ANCESTRAL SPECIES	19	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Cricetinae	ANCESTRAL SPECIES	3	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Chinese hamster chok1gshd	MODERN SPECIES	1	Slc11a1 (ENSCGRG00001020070)	Ctdsp1 (ENSCGRG00001020131)	Vil1 (ENSCGRG00001022375) #7	Usp37 (ENSCGRG00001020814) #8	Cnot9 (ENSCGRG00001006914) #9	Plcd4 (ENSCGRG00001019995) #10	ENSCGRG00001020944	Bcs1l (ENSCGRG00001022549) #12	Rnf25 (ENSCGRG00001019945) #13	Stk36 (ENSCGRG00001021047) #14	Ttll4 (ENSCGRG00001020353) #16	Cyp27a1 (ENSCGRG00001022449) #17	Prkag3 (ENSCGRG00001023244) #19	Wnt6 (ENSCGRG00001020412) #20	Wnt10a (ENSCGRG00001021957) #21	Cdk5r2 (ENSCGRG00001010890) #22	Fev (ENSCGRG00001022388) #23	Cryba2 (ENSCGRG00001020857) #24	Cfap65 (ENSCGRG00001021271) #25	Ihh (ENSCGRG00001004911) #26	Nhej1 (ENSCGRG00001020270) #27	Slc23a3 (ENSCGRG00001021979) #28	Cnppd1 (ENSCGRG00001021884) #29	Retreg2 (ENSCGRG00001020316) #30	Zfand2b (ENSCGRG00001023088) #32	Abcb6 (ENSCGRG00001021485) #33	Atg9a (ENSCGRG00001020609) #34	Ankzf1 (ENSCGRG00001003325) #35	Glb1l (ENSCGRG00001022575) #36	Stk16 (ENSCGRG00001023098) #37	ENSCGRG00001024425
Golden Hamster	MODERN SPECIES	640	Ctdsp1 (ENSMAUG00000004766)	Vil1 (ENSMAUG00000001066) #7	Usp37 (ENSMAUG00000020807) #8	Cnot9 (ENSMAUG00000000762) #9	Plcd4 (ENSMAUG00000001125) #10	ENSMAUG00000016846	Bcs1l (ENSMAUG00000016355) #12	ENSMAUG00000019636 #13	ENSMAUG00000009866 #14	ENSMAUG00000018220	Ttll4 (ENSMAUG00000013354) #16	Cyp27a1 (ENSMAUG00000012139) #17	Prkag3 (ENSMAUG00000009130) #19	Wnt6 (ENSMAUG00000001585) #20	Wnt10a (ENSMAUG00000002340) #21	Cdk5r2 (ENSMAUG00000008653) #22	Fev (ENSMAUG00000007309) #23	Cryba2 (ENSMAUG00000009795) #24	Cfap65 (ENSMAUG00000014580) #25	Ihh (ENSMAUG00000014723) #26	Nhej1 (ENSMAUG00000021394) #27	Slc23a3 (ENSMAUG00000012279) #28	ENSMAUG00000016029 #29	Retreg2 (ENSMAUG00000001382) #30	ENSMAUG00000015584 #33	Atg9a (ENSMAUG00000021504) #34	Glb1l (ENSMAUG00000016945) #36	Stk16 (ENSMAUG00000020739) #37	Tuba4a (ENSMAUG00000010899)	Dnajb2 (ENSMAUG00000018185)	ENSMAUG00000019028
Cricetidae_B	ANCESTRAL SPECIES	20	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00930000151420	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT01040000242059	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37
Northern American deer mouse	MODERN SPECIES	4	Slc11a1 (ENSPEMG00000000568)	Ctdsp1 (ENSPEMG00000025369)	Vil1 (ENSPEMG00000012484) #7	Usp37 (ENSPEMG00000002989) #8	Cnot9 (ENSPEMG00000014045) #9	Plcd4 (ENSPEMG00000016923) #10	Zfp142 (ENSPEMG00000000784) #11	Bcs1l (ENSPEMG00000009977) #12	Rnf25 (ENSPEMG00000013432) #13	Stk36 (ENSPEMG00000025017) #14	Ttll4 (ENSPEMG00000015183) #16	Cyp27a1 (ENSPEMG00000016775) #17	Prkag3 (ENSPEMG00000015508) #19	Wnt6 (ENSPEMG00000013371) #20	Wnt10a (ENSPEMG00000026915) #21	ENSPEMG00000026703 #22	Fev (ENSPEMG00000030849) #23	Cryba2 (ENSPEMG00000012049) #24	Cfap65 (ENSPEMG00000000225) #25	Ihh (ENSPEMG00000029231) #26	ENSPEMG00000013096 #27	ENSPEMG00000030620	Slc23a3 (ENSPEMG00000005189) #28	Cnppd1 (ENSPEMG00000020339) #29	Retreg2 (ENSPEMG00000010062) #30	Zfand2b (ENSPEMG00000030469) #32	Abcb6 (ENSPEMG00000009632) #33	Atg9a (ENSPEMG00000013285) #34	Ankzf1 (ENSPEMG00000014818) #35	Glb1l (ENSPEMG00000017889) #36	Stk16 (ENSPEMG00000018725) #37
Prairie vole	MODERN SPECIES	354	Ctdsp1 (ENSMOCG00000018253)	Vil1 (ENSMOCG00000018545) #7	Usp37 (ENSMOCG00000002015) #8	Cnot9 (ENSMOCG00000014736) #9	Plcd4 (ENSMOCG00000007617) #10	ENSMOCG00000009252	Bcs1l (ENSMOCG00000021587) #12	ENSMOCG00000020374 #13	ENSMOCG00000021552 #14	ENSMOCG00000014792	Ttll4 (ENSMOCG00000022947) #16	Cyp27a1 (ENSMOCG00000022721) #17	Prkag3 (ENSMOCG00000002259) #19	Wnt6 (ENSMOCG00000017824) #20	Wnt10a (ENSMOCG00000019338) #21	Cdk5r2 (ENSMOCG00000001322) #22	Fev (ENSMOCG00000007062) #23	Cryba2 (ENSMOCG00000002053) #24	Cfap65 (ENSMOCG00000019421) #25	Ihh (ENSMOCG00000002358) #26	Nhej1 (ENSMOCG00000020976) #27	Slc23a3 (ENSMOCG00000019126) #28	Cnppd1 (ENSMOCG00000017920) #29	Retreg2 (ENSMOCG00000016481) #30	Zfand2b (ENSMOCG00000001276) #32	ENSMOCG00000021361 #33	Atg9a (ENSMOCG00000013127) #34	Ankzf1 (ENSMOCG00000006514) #35	Glb1l (ENSMOCG00000014084) #36	Stk16 (ENSMOCG00000017649) #37	Tuba4a (ENSMOCG00000013079)
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163074 #11	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Marmotini_b	ANCESTRAL SPECIES	71	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916 #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Squirrel	MODERN SPECIES	169	CTDSP1 (ENSSTOG00000008434)	VIL1 (ENSSTOG00000026327) #7	USP37 (ENSSTOG00000014934) #8	CNOT9 (ENSSTOG00000014954) #9	PLCD4 (ENSSTOG00000006406) #10	ENSSTOG00000020993	BCS1L (ENSSTOG00000006465) #12	RNF25 (ENSSTOG00000006486) #13	STK36 (ENSSTOG00000006509) #14	TTLL4 (ENSSTOG00000006562) #16	CYP27A1 (ENSSTOG00000006612) #17	PRKAG3 (ENSSTOG00000006628) #19	WNT6 (ENSSTOG00000006654) #20	WNT10A (ENSSTOG00000026725) #21	ENSSTOG00000022853	CDK5R2 (ENSSTOG00000025038) #22	FEV (ENSSTOG00000020252) #23	CRYBA2 (ENSSTOG00000009326) #24	ENSSTOG00000009331 #25	IHH (ENSSTOG00000027440) #26	NHEJ1 (ENSSTOG00000022820) #27	SLC23A3 (ENSSTOG00000009384) #28	CNPPD1 (ENSSTOG00000009401) #29	RETREG2 (ENSSTOG00000025849) #30	ZFAND2B (ENSSTOG00000011063) #32	ABCB6 (ENSSTOG00000011066) #33	ATG9A (ENSSTOG00000023078) #34	ENSSTOG00000030606 #35	GLB1L (ENSSTOG00000011089) #36	ENSSTOG00000011083 #35	STK16 (ENSSTOG00000025197) #37
Arctic ground squirrel	MODERN SPECIES	76	SLC11A1 (ENSUPAG00010011835)	CTDSP1 (ENSUPAG00010011867)	VIL1 (ENSUPAG00010012061) #7	USP37 (ENSUPAG00010012094) #8	CNOT9 (ENSUPAG00010012221) #9	PLCD4 (ENSUPAG00010012230) #10	ENSUPAG00010012261	BCS1L (ENSUPAG00010012288) #12	RNF25 (ENSUPAG00010012304) #13	STK36 (ENSUPAG00010012312) #14	TTLL4 (ENSUPAG00010012373) #16	CYP27A1 (ENSUPAG00010012425) #17	PRKAG3 (ENSUPAG00010012438) #19	WNT6 (ENSUPAG00010012502) #20	WNT10A (ENSUPAG00010012507) #21	CDK5R2 (ENSUPAG00010012510) #22	FEV (ENSUPAG00010012515) #23	CRYBA2 (ENSUPAG00010012524) #24	CFAP65 (ENSUPAG00010012541) #25	IHH (ENSUPAG00010012634) #26	NHEJ1 (ENSUPAG00010012641) #27	SLC23A3 (ENSUPAG00010012663) #28	CNPPD1 (ENSUPAG00010012676) #29	ENSUPAG00010012690	ZFAND2B (ENSUPAG00010012706) #32	ABCB6 (ENSUPAG00010012726) #33	ATG9A (ENSUPAG00010012767) #34	ANKZF1 (ENSUPAG00010012803) #35	GLB1L (ENSUPAG00010012811) #36	STK16 (ENSUPAG00010012826) #37	TUBA4A (ENSUPAG00010012836)
Eurasian red squirrel	MODERN SPECIES	12	CTDSP1 (ENSSVLG00005011687)	VIL1 (ENSSVLG00005011808) #7	USP37 (ENSSVLG00005012174) #8	CNOT9 (ENSSVLG00005012291) #9	PLCD4 (ENSSVLG00005012386) #10	ENSSVLG00005012744	BCS1L (ENSSVLG00005012862) #12	RNF25 (ENSSVLG00005012906) #13	STK36 (ENSSVLG00005012970) #14	TTLL4 (ENSSVLG00005013389) #16	ENSSVLG00005013536	CYP27A1 (ENSSVLG00005013581) #17	PRKAG3 (ENSSVLG00005013746) #19	WNT6 (ENSSVLG00005013835) #20	WNT10A (ENSSVLG00005013864) #21	CDK5R2 (ENSSVLG00005013909) #22	FEV (ENSSVLG00005013940) #23	CRYBA2 (ENSSVLG00005014007) #24	CFAP65 (ENSSVLG00005014142) #25	IHH (ENSSVLG00005014629) #26	NHEJ1 (ENSSVLG00005014689) #27	ENSSVLG00005014735	SLC23A3 (ENSSVLG00005014807) #28	CNPPD1 (ENSSVLG00005015098) #29	ENSSVLG00005015144	ZFAND2B (ENSSVLG00005015187) #32	ABCB6 (ENSSVLG00005015299) #33	ATG9A (ENSSVLG00005015521) #34	ANKZF1 (ENSSVLG00005015600) #35	GLB1L (ENSSVLG00005015724) #36	STK16 (ENSSVLG00005015849) #37
Hystricomorpha	ANCESTRAL SPECIES	28	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916.c #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Naked mole-rat female	MODERN SPECIES	17	USP37 (ENSHGLG00000013897) #8	CNOT9 (ENSHGLG00000016743) #9	PLCD4 (ENSHGLG00000008143) #10	ENSHGLG00000010262	BCS1L (ENSHGLG00000008703) #12	RNF25 (ENSHGLG00000007383) #13	STK36 (ENSHGLG00000016143) #14	TTLL4 (ENSHGLG00000015642) #16	ENSHGLG00000012335	CYP27A1 (ENSHGLG00000013105) #17	ENSHGLG00000042292	PRKAG3 (ENSHGLG00000018906) #19	WNT6 (ENSHGLG00000008425) #20	WNT10A (ENSHGLG00000006038) #21	ENSHGLG00000042473	CDK5R2 (ENSHGLG00000020594) #22	FEV (ENSHGLG00000049169) #23	ENSHGLG00000017973 #24	CFAP65 (ENSHGLG00000015698) #25	IHH (ENSHGLG00000037115) #26	NHEJ1 (ENSHGLG00000018120) #27	SLC23A3 (ENSHGLG00000015164) #28	CNPPD1 (ENSHGLG00000017860) #29	RETREG2 (ENSHGLG00000012620) #30	ZFAND2B (ENSHGLG00000017806) #32	ABCB6 (ENSHGLG00000018842) #33	ANKZF1 (ENSHGLG00000019538) #35	ATG9A (ENSHGLG00000014975) #34	GLB1L (ENSHGLG00000017098) #36	STK16 (ENSHGLG00000042503) #37	TUBA4A (ENSHGLG00000010691)
Hystricomorpha_a	ANCESTRAL SPECIES	32	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916.c #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Guinea pig	MODERN SPECIES	89				USP37 (ENSCPOG00000015117) #8	CNOT9 (ENSCPOG00000038715) #9	PLCD4 (ENSCPOG00000015123) #10	ENSCPOG00000002539	BCS1L (ENSCPOG00000002544) #12	ENSCPOG00000002546 #13	STK36 (ENSCPOG00000002553) #14	TTLL4 (ENSCPOG00000002562) #16	CYP27A1 (ENSCPOG00000001403) #17	PRKAG3 (ENSCPOG00000025222) #19	WNT6 (ENSCPOG00000031683) #20	WNT10A (ENSCPOG00000036720) #21	ENSCPOG00000031234 #22	FEV (ENSCPOG00000021229) #23	CRYBA2 (ENSCPOG00000009130) #24	CFAP65 (ENSCPOG00000015251) #25	IHH (ENSCPOG00000031896) #26	NHEJ1 (ENSCPOG00000023981) #27	SLC23A3 (ENSCPOG00000009623) #28	CNPPD1 (ENSCPOG00000037547) #29	RETREG2 (ENSCPOG00000004582) #30	ZFAND2B (ENSCPOG00000004584) #32	ABCB6 (ENSCPOG00000004587) #33	ATG9A (ENSCPOG00000025686) #34	ANKZF1 (ENSCPOG00000004593) #35	GLB1L (ENSCPOG00000004595) #36	STK16 (ENSCPOG00000004600) #37	TUBA4A (ENSCPOG00000037151)
Hystricomorpha_b	ANCESTRAL SPECIES	28	ENSGT00940000160799	ENSGT01040000240451.a.a	ENSGT00940000160544 #7	ENSGT00940000158091 #8	ENSGT00390000001225 #9	ENSGT00940000156180 #10	ENSGT00940000163279	ENSGT00390000005415.b #12	ENSGT00390000001557 #13	ENSGT00940000158375 #14	ENSGT00940000157916.c #16	ENSGT00950000182905.a.a.a.a.b #17	ENSGT00950000183019.f.b.b #19	ENSGT00940000159281 #20	ENSGT00940000160299 #21	ENSGT00390000008812.a #22	ENSGT00940000161562 #23	ENSGT00940000160306 #24	ENSGT00430000031142 #25	ENSGT00940000159207 #26	ENSGT00390000009940 #27	ENSGT00950000182953.A #28	ENSGT00390000000862 #29	ENSGT00940000162511 #30	ENSGT00940000159648 #32	ENSGT00940000156160 #33	ENSGT00390000014839.b #34	ENSGT00390000005911 #35	ENSGT00950000182942.a.b #36	ENSGT00550000075037 #37	ENSGT00950000183165.a
Long-tailed chinchilla	MODERN SPECIES	160	SLC11A1 (ENSCLAG00000012795)	CTDSP1 (ENSCLAG00000014330)	VIL1 (ENSCLAG00000008436) #7	USP37 (ENSCLAG00000007725) #8	CNOT9 (ENSCLAG00000013219) #9	PLCD4 (ENSCLAG00000008034) #10	ENSCLAG00000011769	BCS1L (ENSCLAG00000014008) #12	RNF25 (ENSCLAG00000012866) #13	STK36 (ENSCLAG00000016247) #14	ENSCLAG00000007759 #16	CYP27A1 (ENSCLAG00000008414) #17	PRKAG3 (ENSCLAG00000009025) #19	WNT6 (ENSCLAG00000008099) #20	WNT10A (ENSCLAG00000009082) #21	CDK5R2 (ENSCLAG00000008214) #22	FEV (ENSCLAG00000007374) #23	CRYBA2 (ENSCLAG00000007468) #24	CFAP65 (ENSCLAG00000008296) #25	IHH (ENSCLAG00000008837) #26	NHEJ1 (ENSCLAG00000010456) #27	SLC23A3 (ENSCLAG00000012377) #28	CNPPD1 (ENSCLAG00000011643) #29	RETREG2 (ENSCLAG00000009980) #30	ZFAND2B (ENSCLAG00000008639) #32	ABCB6 (ENSCLAG00000009060) #33	ATG9A (ENSCLAG00000008533) #34	ANKZF1 (ENSCLAG00000008961) #35	GLB1L (ENSCLAG00000007592) #36	STK16 (ENSCLAG00000010421) #37	TUBA4A (ENSCLAG00000011603)
Degu	MODERN SPECIES	137	ENSODEG00000006228	USP37 (ENSODEG00000006571) #8	ENSODEG00000007185 #9	PLCD4 (ENSODEG00000009216) #10	ENSODEG00000006310	ENSODEG00000008977 ##12	ENSODEG00000008204 #13	ENSODEG00000006989 #14	ENSODEG00000010583	ENSODEG00000010088	TTLL4 (ENSODEG00000008937) #16	CYP27A1 (ENSODEG00000006917) #17	PRKAG3 (ENSODEG00000007789) #19	WNT6 (ENSODEG00000006363) #20	WNT10A (ENSODEG00000005957) #21	CDK5R2 (ENSODEG00000019819) #22	FEV (ENSODEG00000008014) #23	CRYBA2 (ENSODEG00000007929) #24	CFAP65 (ENSODEG00000008327) #25	IHH (ENSODEG00000006698) #26	ENSODEG00000005977 #27	SLC23A3 (ENSODEG00000007227) #28	CNPPD1 (ENSODEG00000006063) #29	RETREG2 (ENSODEG00000007657) #30	ZFAND2B (ENSODEG00000006890) #32	ABCB6 (ENSODEG00000006250) #33	ATG9A (ENSODEG00000009070) #34	ENSODEG00000006254 #35	ENSODEG00000006309 #35	GLB1L (ENSODEG00000006656) #36	STK16 (ENSODEG00000006054) #37