Gnathostomata	ANCESTRAL SPECIES																	ENSGT00530000063647.B #22
Euteleostomi	ANCESTRAL SPECIES	206										ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000164733	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a	ENSGT00390000010523.d	ENSGT00730000111107	ENSGT00940000158593	ENSGT00390000016940.c.a	ENSGT00390000013978.d #14
Sarcopterygii	ANCESTRAL SPECIES	373																ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a #25	ENSGT01050000244905.C #12	ENSGT00500000045104 #11	ENSGT00390000015124 #10	ENSGT00940000156260 #9	ENSGT01050000246421	ENSGT00940000159780 #8	ENSGT00390000010463.a.a.a #7
Tetrapoda	ANCESTRAL SPECIES	52										ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00940000158593
Amniota	ANCESTRAL SPECIES	30	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Mammalia	ANCESTRAL SPECIES	31	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Theria	ANCESTRAL SPECIES	2	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34
Eutheria	ANCESTRAL SPECIES	1	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34
Boreoeutheria	ANCESTRAL SPECIES	6	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679
Euarchontoglires	ANCESTRAL SPECIES	6	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT01060000249814	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Primates	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT01060000249814	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Haplorrhini	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT01060000249814	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Simiiformes	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Catarrhini	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Hominoidea	ANCESTRAL SPECIES	5	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.i ##34	ENSGT00940000160756.h.a #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Hominidae	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.i ##34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	5	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158.f #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.i ##34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Homo/Pan group	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158.f #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.i ##34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Pan	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158.f #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.i ##34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Bonobo	MODERN SPECIES	3	GLS2 (ENSPPAG00000028139) #7	SPRYD4 (ENSPPAG00000027537) #8	MIP (ENSPPAG00000043947) #9	TIMELESS (ENSPPAG00000035399) #10	APOF (ENSPPAG00000037531) #11	STAT2 (ENSPPAG00000041859) #12	IL23A (ENSPPAG00000043115) #13	PAN2 (ENSPPAG00000001208) #14	CNPY2 (ENSPPAG00000031156) #15	CS (ENSPPAG00000036762) #16	COQ10A (ENSPPAG00000034058) #17	ANKRD52 (ENSPPAG00000017201) #18	ENSPPAG00000024178 #19	SLC39A5 (ENSPPAG00000042690) #20	NABP2 (ENSPPAG00000000812) #21	RNF41 (ENSPPAG00000029406) #22	SMARCC2 (ENSPPAG00000028275) #23	ENSPPAG00000001370 #24	MYL6B (ENSPPAG00000036884) #25	ESYT1 (ENSPPAG00000033817) #26	ZC3H10 (ENSPPAG00000023790) #27	ENSPPAG00000043569 #28	PA2G4 (ENSPPAG00000035411) #29	ERBB3 (ENSPPAG00000035409) #30	ENSPPAG00000036020 #31	IKZF4 (ENSPPAG00000043490) #32	SUOX (ENSPPAG00000006238) #33	RAB5B (ENSPPAG00000035431) #34	CDK2 (ENSPPAG00000034672) #35	PMEL (ENSPPAG00000034937) #36	DGKA (ENSPPAG00000009029) #37
Chimpanzee	MODERN SPECIES	3	GLS2 (ENSPTRG00000005101) #7	SPRYD4 (ENSPTRG00000005100) #8	MIP (ENSPTRG00000005099) #9	TIMELESS (ENSPTRG00000022963) #10	APOF (ENSPTRG00000005096) #11	STAT2 (ENSPTRG00000005095) #12	IL23A (ENSPTRG00000005093) #13	PAN2 (ENSPTRG00000052054) #14	CNPY2 (ENSPTRG00000046892) #15	CS (ENSPTRG00000005090) #16	COQ10A (ENSPTRG00000005087) #17	ANKRD52 (ENSPTRG00000005085) #18	ENSPTRG00000047758 #19	SLC39A5 (ENSPTRG00000005084) #20	NABP2 (ENSPTRG00000050931) #21	RNF41 (ENSPTRG00000005082) #22	SMARCC2 (ENSPTRG00000005081) #23	MYL6 (ENSPTRG00000005080) #24	MYL6B (ENSPTRG00000023043) #25	ESYT1 (ENSPTRG00000005079) #26	ZC3H10 (ENSPTRG00000005078) #27	ENSPTRG00000039769	PA2G4 (ENSPTRG00000045671) #29	ERBB3 (ENSPTRG00000005076) #30	RPS26 (ENSPTRG00000005075) #31	IKZF4 (ENSPTRG00000005074) #32	SUOX (ENSPTRG00000005073) #33	RAB5B (ENSPTRG00000005071) ##34	CDK2 (ENSPTRG00000005070) #35	PMEL (ENSPTRG00000005069) #36	DGKA (ENSPTRG00000005068) #37
Human	MODERN SPECIES	3	GLS2 (ENSG00000135423) #7	SPRYD4 (ENSG00000176422) #8	MIP (ENSG00000135517) #9	TIMELESS (ENSG00000111602) #10	APOF (ENSG00000175336) #11	STAT2 (ENSG00000170581) #12	IL23A (ENSG00000110944) #13	PAN2 (ENSG00000135473) #14	CNPY2 (ENSG00000257727) #15	ENSG00000144785	CS (ENSG00000062485) #16	COQ10A (ENSG00000135469) #17	ANKRD52 (ENSG00000139645) #18	SLC39A5 (ENSG00000139540) #20	NABP2 (ENSG00000139579) #21	RNF41 (ENSG00000181852) #22	SMARCC2 (ENSG00000139613) #23	MYL6 (ENSG00000092841) ##25	MYL6B (ENSG00000196465) #25	ZC3H10 (ENSG00000135482) #27	ESYT1 (ENSG00000139641) #26	RPL41 (ENSG00000229117)	PA2G4 (ENSG00000170515) #29	ENSG00000257411	ERBB3 (ENSG00000065361) #30	RPS26 (ENSG00000197728) #31	IKZF4 (ENSG00000123411) #32	SUOX (ENSG00000139531) #33	RAB5B (ENSG00000111540) ##34	CDK2 (ENSG00000123374) #35	PMEL (ENSG00000185664) #36
Gorilla	MODERN SPECIES	3	MIP (ENSGGOG00000016571) #9	TIMELESS (ENSGGOG00000016556) #10	ENSGGOG00000043322	ENSGGOG00000037890 #15	APOF (ENSGGOG00000006142) #11	STAT2 (ENSGGOG00000006127) #12	IL23A (ENSGGOG00000001663) #13	PAN2 (ENSGGOG00000009115) #14	CNPY2 (ENSGGOG00000009106) #15	CS (ENSGGOG00000009096) #16	COQ10A (ENSGGOG00000009092) #17	ANKRD52 (ENSGGOG00000009065) #18	ENSGGOG00000042517 #19	SLC39A5 (ENSGGOG00000009056) #20	NABP2 (ENSGGOG00000009050) #21	RNF41 (ENSGGOG00000011122) #22	SMARCC2 (ENSGGOG00000003282) #23	ENSGGOG00000038677 #24	MYL6B (ENSGGOG00000003277) #25	ENSGGOG00000038358 #30	RPS26 (ENSGGOG00000011566) #31	IKZF4 (ENSGGOG00000011558) #32	SUOX (ENSGGOG00000023990) #33	ENSGGOG00000008325 ##34	ENSGGOG00000040719	CDK2 (ENSGGOG00000002312) #35	ENSGGOG00000036657 #36	ENSGGOG00000037614 #36	DGKA (ENSGGOG00000014039) #37	PYM1 (ENSGGOG00000043246)	MMP19 (ENSGGOG00000013231)
Orangutan	MODERN SPECIES	3	SPRYD4 (ENSPPYG00000004663) #8	MIP (ENSPPYG00000004662) #9	TIMELESS (ENSPPYG00000004661) #10	ENSPPYG00000004660	APOF (ENSPPYG00000040049) #11	STAT2 (ENSPPYG00000037444) #12	IL23A (ENSPPYG00000004657) #13	PAN2 (ENSPPYG00000004656) #14	CNPY2 (ENSPPYG00000004655) #15	CS (ENSPPYG00000004654) #16	COQ10A (ENSPPYG00000004653) #17	ANKRD52 (ENSPPYG00000004652) #18	ENSPPYG00000031705 #19	SLC39A5 (ENSPPYG00000004651) #20	NABP2 (ENSPPYG00000004650) #21	RNF41 (ENSPPYG00000004649) #22	SMARCC2 (ENSPPYG00000004648) #23	MYL6 (ENSPPYG00000004647) #24	MYL6B (ENSPPYG00000004646) #25	ESYT1 (ENSPPYG00000004645) #26	ZC3H10 (ENSPPYG00000004644) #27	RPL41 (ENSPPYG00000033815)	PA2G4 (ENSPPYG00000025851) #29	ERBB3 (ENSPPYG00000004643) #30	RPS26 (ENSPPYG00000004642) #31	IKZF4 (ENSPPYG00000039619) #32	SUOX (ENSPPYG00000004640) #33	RAB5B (ENSPPYG00000004639) ##34	CDK2 (ENSPPYG00000004638) #35	PMEL (ENSPPYG00000004637) #36	DGKA (ENSPPYG00000004636) #37
Gibbon	MODERN SPECIES	307															ENSNLEG00000029171	RNF41 (ENSNLEG00000011026) #22
Cercopithecidae	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00900000143705	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00910000147269	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679
Rhinopithecus	ANCESTRAL SPECIES	192	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00900000143705	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25
Golden snub-nosed monkey	MODERN SPECIES	2036	GLS2 (ENSRROG00000034902) #7	SPRYD4 (ENSRROG00000044380) #8	MIP (ENSRROG00000038909) #9	TIMELESS (ENSRROG00000029339) #10	APOF (ENSRROG00000039109) #11	STAT2 (ENSRROG00000031109) #12	IL23A (ENSRROG00000045544) #13	PAN2 (ENSRROG00000041950) #14	CNPY2 (ENSRROG00000045089) #15	CS (ENSRROG00000029805) #16	COQ10A (ENSRROG00000036046) #17	ANKRD52 (ENSRROG00000040375) #18	ENSRROG00000039973 #19	SLC39A5 (ENSRROG00000032733) #20	NABP2 (ENSRROG00000044063) #21	RNF41 (ENSRROG00000034005) #22	ENSRROG00000033535	SMARCC2 (ENSRROG00000035933) #23	MYL6 (ENSRROG00000035863) ##25	ENSRROG00000010380 #25	ESYT1 (ENSRROG00000035112) #26	ZC3H10 (ENSRROG00000013225) #27	ENSRROG00000035193	ENSRROG00000005689 ##29	ERBB3 (ENSRROG00000029845) #30	RPS26 (ENSRROG00000042720) #31	IKZF4 (ENSRROG00000043179) #32	ENSRROG00000032018	SUOX (ENSRROG00000044121) #33	RAB5B (ENSRROG00000037973) #34	CDK2 (ENSRROG00000030866) #35
Black snub-nosed monkey	MODERN SPECIES	1633	GLS2 (ENSRBIG00000032292) #7	SPRYD4 (ENSRBIG00000038455) #8	MIP (ENSRBIG00000040282) #9	TIMELESS (ENSRBIG00000012600) #10	APOF (ENSRBIG00000030835) #11	STAT2 (ENSRBIG00000040469) #12	IL23A (ENSRBIG00000035644) #13	PAN2 (ENSRBIG00000029591) #14	CNPY2 (ENSRBIG00000027781) #15	CS (ENSRBIG00000032425) #16	COQ10A (ENSRBIG00000026274) #17	ANKRD52 (ENSRBIG00000042462) #18	SLC39A5 (ENSRBIG00000033495) #20	NABP2 (ENSRBIG00000039231) #21	ENSRBIG00000037580	RNF41 (ENSRBIG00000038566) #22	SMARCC2 (ENSRBIG00000006698) #23	ENSRBIG00000029231 ##25	ENSRBIG00000031231 #25	ESYT1 (ENSRBIG00000044819) #26	ZC3H10 (ENSRBIG00000019615) #27	ENSRBIG00000032989	PA2G4 (ENSRBIG00000032144) ##29	ERBB3 (ENSRBIG00000037848) #30	ENSRBIG00000031927 #31	ENSRBIG00000040056	IKZF4 (ENSRBIG00000036210) #32	SUOX (ENSRBIG00000035481) #33	ENSRBIG00000032084	RAB5B (ENSRBIG00000013165) #34	CDK2 (ENSRBIG00000041957) #35
Cercopithecinae	ANCESTRAL SPECIES	7	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00900000143705	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00910000147269	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34
Vervet Monkey	MODERN SPECIES	2	RBMS2 (ENSCSAG00000005074)	GLS2 (ENSCSAG00000005081) #7	SPRYD4 (ENSCSAG00000005075) #8	MIP (ENSCSAG00000005087) #9	TIMELESS (ENSCSAG00000005142) #10	APOF (ENSCSAG00000005156) #11	STAT2 (ENSCSAG00000005161) #12	IL23A (ENSCSAG00000005166) #13	PAN2 (ENSCSAG00000005173) #14	CNPY2 (ENSCSAG00000005180) #15	CS (ENSCSAG00000005183) #16	COQ10A (ENSCSAG00000005184) #17	ANKRD52 (ENSCSAG00000005189) #18	SLC39A5 (ENSCSAG00000005194) #20	NABP2 (ENSCSAG00000005199) #21	RNF41 (ENSCSAG00000005201) #22	SMARCC2 (ENSCSAG00000005212) #23	MYL6B (ENSCSAG00000005221) #25	ESYT1 (ENSCSAG00000005229) #26	ZC3H10 (ENSCSAG00000018893) #27	PA2G4 (ENSCSAG00000005246) ##29	ERBB3 (ENSCSAG00000005259) #30	IKZF4 (ENSCSAG00000005270) #32	SUOX (ENSCSAG00000005275) #33	RAB5B (ENSCSAG00000005277) #34	CDK2 (ENSCSAG00000005281) #35	PMEL (ENSCSAG00000005284) #36	DGKA (ENSCSAG00000005288) #37	PYM1 (ENSCSAG00000005291)	MMP19 (ENSCSAG00000005294)	ORMDL2 (ENSCSAG00000005295)
Cercopithecinae_a	ANCESTRAL SPECIES	7	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00900000143705	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00910000147269	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34
Cercopithecinae_b	ANCESTRAL SPECIES	2	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00910000147269	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Olive baboon	MODERN SPECIES	19	SPRYD4 (ENSPANG00000010685) #8	MIP (ENSPANG00000011371) #9	TIMELESS (ENSPANG00000004690) #10	ENSPANG00000047501	APOF (ENSPANG00000014071) #11	STAT2 (ENSPANG00000012539) #12	IL23A (ENSPANG00000012662) #13	PAN2 (ENSPANG00000018906) #14	CNPY2 (ENSPANG00000019456) #15	CS (ENSPANG00000009255) #16	COQ10A (ENSPANG00000004851) #17	ANKRD52 (ENSPANG00000007981) #18	ENSPANG00000039484 #19	SLC39A5 (ENSPANG00000004176) #20	NABP2 (ENSPANG00000026357) #21	RNF41 (ENSPANG00000034803) #22	SMARCC2 (ENSPANG00000021074) #23	ENSPANG00000010686 ##25	MYL6B (ENSPANG00000003300) #25	ESYT1 (ENSPANG00000017046) #26	ZC3H10 (ENSPANG00000029620) #27	ENSPANG00000031934	PA2G4 (ENSPANG00000026387) ##29	ERBB3 (ENSPANG00000016193) #30	ENSPANG00000034033 #31	IKZF4 (ENSPANG00000033363) #32	SUOX (ENSPANG00000029373) #33	RAB5B (ENSPANG00000021075) #34	CDK2 (ENSPANG00000024987) #35	PMEL (ENSPANG00000002381) #36	DGKA (ENSPANG00000019457) #37
Cercopithecinae_d	ANCESTRAL SPECIES	3	ENSGT00390000005727.a.b.a.b.c.b.b	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00910000147269	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Sooty mangabey	MODERN SPECIES	117	ENSCATG00000045349	GLS2 (ENSCATG00000039516) #7	SPRYD4 (ENSCATG00000017241) #8	MIP (ENSCATG00000036566) #9	TIMELESS (ENSCATG00000035871) #10	APOF (ENSCATG00000024930) #11	STAT2 (ENSCATG00000040123) #12	IL23A (ENSCATG00000029741) #13	PAN2 (ENSCATG00000045076) #14	CNPY2 (ENSCATG00000042349) #15	CS (ENSCATG00000039101) #16	COQ10A (ENSCATG00000021428) #17	ANKRD52 (ENSCATG00000041892) #18	SLC39A5 (ENSCATG00000040652) #20	NABP2 (ENSCATG00000031131) #21	RNF41 (ENSCATG00000015315) #22	SMARCC2 (ENSCATG00000032123) #23	ENSCATG00000035967 #24	MYL6B (ENSCATG00000040921) #25	ESYT1 (ENSCATG00000038093) #26	ZC3H10 (ENSCATG00000012691) #27	ENSCATG00000027448	ENSCATG00000031361 ##29	ERBB3 (ENSCATG00000029468) #30	ENSCATG00000031655 ##31	IKZF4 (ENSCATG00000032139) #32	ENSCATG00000037166	SUOX (ENSCATG00000013498) #33	RAB5B (ENSCATG00000034978) #34	CDK2 (ENSCATG00000042921) #35	PMEL (ENSCATG00000038008) #36
Drill	MODERN SPECIES	1662																RNF41 (ENSMLEG00000038918) #22	SMARCC2 (ENSMLEG00000024985) #23	ENSMLEG00000041676 ##25	MYL6B (ENSMLEG00000035374) #25	ESYT1 (ENSMLEG00000042262) #26	ZC3H10 (ENSMLEG00000027930) #27	ENSMLEG00000032569	ENSMLEG00000035480 ##29	ERBB3 (ENSMLEG00000031798) #30	ENSMLEG00000043596 ##31	ENSMLEG00000039376	IKZF4 (ENSMLEG00000031109) #32	SUOX (ENSMLEG00000044392) #33	RAB5B (ENSMLEG00000034462) #34	CDK2 (ENSMLEG00000004017) #35	PMEL (ENSMLEG00000041104) #36
Macaca	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00900000143705	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559.c	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00910000147269	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Pig-tailed macaque	MODERN SPECIES	526	ENSMNEG00000030798	GLS2 (ENSMNEG00000035725) #7	SPRYD4 (ENSMNEG00000038600) #8	MIP (ENSMNEG00000033083) #9	TIMELESS (ENSMNEG00000040552) #10	APOF (ENSMNEG00000044594) #11	STAT2 (ENSMNEG00000034007) #12	IL23A (ENSMNEG00000036003) #13	PAN2 (ENSMNEG00000033264) #14	CNPY2 (ENSMNEG00000041624) #15	CS (ENSMNEG00000035815) #16	COQ10A (ENSMNEG00000040946) #17	ANKRD52 (ENSMNEG00000002356) #18	SLC39A5 (ENSMNEG00000031313) #20	NABP2 (ENSMNEG00000027879) #21	RNF41 (ENSMNEG00000029427) #22	ENSMNEG00000024702	SMARCC2 (ENSMNEG00000043890) #23	ENSMNEG00000037322 #24	MYL6B (ENSMNEG00000034674) #25	ESYT1 (ENSMNEG00000011748) #26	ZC3H10 (ENSMNEG00000025282) #27	ENSMNEG00000045402	ENSMNEG00000044000 ##29	ERBB3 (ENSMNEG00000030064) #30	RPS26 (ENSMNEG00000039911) #31	IKZF4 (ENSMNEG00000006819) #32	ENSMNEG00000042457	SUOX (ENSMNEG00000007804) #33	RAB5B (ENSMNEG00000005338) #34	CDK2 (ENSMNEG00000044266) #35
Macaca_a	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.b.b.b	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559.c	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00950000185738	ENSGT00390000002517.a.a.c.a #31	ENSGT00910000147269	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Crab-eating macaque	MODERN SPECIES	2	GLS2 (ENSMFAG00000045451) #7	SPRYD4 (ENSMFAG00000003483) #8	MIP (ENSMFAG00000030328) #9	TIMELESS (ENSMFAG00000030313) #10	ENSMFAG00000064858	APOF (ENSMFAG00000036691) #11	STAT2 (ENSMFAG00000037100) #12	IL23A (ENSMFAG00000000058) #13	PAN2 (ENSMFAG00000002293) #14	COQ10A (ENSMFAG00000027584) #17	CS (ENSMFAG00000002143) #16	ANKRD52 (ENSMFAG00000037030) #18	ENSMFAG00000052628 #19	SLC39A5 (ENSMFAG00000044988) #20	NABP2 (ENSMFAG00000000354) #21	RNF41 (ENSMFAG00000001215) #22	SMARCC2 (ENSMFAG00000031029) #23	ENSMFAG00000033843 #24	MYL6B (ENSMFAG00000043999) #25	ESYT1 (ENSMFAG00000035482) #26	ZC3H10 (ENSMFAG00000027256) #27	ENSMFAG00000051171	ENSMFAG00000032415	ENSMFAG00000042571 ##29	ERBB3 (ENSMFAG00000040171) #30	ENSMFAG00000050693	RPS26 (ENSMFAG00000041709) #31	ENSMFAG00000044598	IKZF4 (ENSMFAG00000002625) #32	SUOX (ENSMFAG00000039926) #33	RAB5B (ENSMFAG00000029992) #34
Rhesus	MODERN SPECIES	2	GLS2 (ENSMMUG00000000860) #7	MIP (ENSMMUG00000010334) #9	TIMELESS (ENSMMUG00000021878) #10	ENSMMUG00000053460	APOF (ENSMMUG00000063898) #11	ENSMMUG00000052144	STAT2 (ENSMMUG00000000803) #12	IL23A (ENSMMUG00000031831) #13	PAN2 (ENSMMUG00000013482) #14	CS (ENSMMUG00000002483) #16	COQ10A (ENSMMUG00000031834) #17	ENSMMUG00000059663	ANKRD52 (ENSMMUG00000008679) #18	SLC39A5 (ENSMMUG00000008674) #20	NABP2 (ENSMMUG00000038453) #21	RNF41 (ENSMMUG00000064075) #22	SMARCC2 (ENSMMUG00000008273) #23	MYL6 (ENSMMUG00000031838) ##25	MYL6B (ENSMMUG00000005214) #25	ESYT1 (ENSMMUG00000021979) #26	ZC3H10 (ENSMMUG00000021084) #27	ENSMMUG00000056126	ERBB3 (ENSMMUG00000020758) #30	ENSMMUG00000058015	RPS26 (ENSMMUG00000058071) #31	IKZF4 (ENSMMUG00000007523) #32	SUOX (ENSMMUG00000064364) #33	RAB5B (ENSMMUG00000031853) #34	PMEL (ENSMMUG00000018816) #36	DGKA (ENSMMUG00000018814) #37	PYM1 (ENSMMUG00000011002)
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00530000063647.B.s #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00530000063647.B.s #22
Marmoset	MODERN SPECIES	21	RBMS2 (ENSCJAG00000010803)	GLS2 (ENSCJAG00000010875) #7	SPRYD4 (ENSCJAG00000039389) #8	MIP (ENSCJAG00000010971) #9	TIMELESS (ENSCJAG00000010984) #10	APOF (ENSCJAG00000011065) #11	STAT2 (ENSCJAG00000011101) #12	IL23A (ENSCJAG00000048090) #13	PAN2 (ENSCJAG00000011141) #14	CNPY2 (ENSCJAG00000011259) #15	CS (ENSCJAG00000011275) #16	ENSCJAG00000011319 #17	ANKRD52 (ENSCJAG00000011349) #18	SLC39A5 (ENSCJAG00000011444) #20	NABP2 (ENSCJAG00000011455) #21	RNF41 (ENSCJAG00000011457) #22	SMARCC2 (ENSCJAG00000011483) #23	ENSCJAG00000002241 ##25	MYL6B (ENSCJAG00000011620) #25	ESYT1 (ENSCJAG00000011638) #26	ZC3H10 (ENSCJAG00000045638) #27	ENSCJAG00000080468	PA2G4 (ENSCJAG00000011811) #29	ERBB3 (ENSCJAG00000011936) #30	RPS26 (ENSCJAG00000048105) #31	IKZF4 (ENSCJAG00000006230) #32	SUOX (ENSCJAG00000006272) #33	RAB5B (ENSCJAG00000041780) #34	CDK2 (ENSCJAG00000007404) #35	PMEL (ENSCJAG00000007553) #36	DGKA (ENSCJAG00000007591) #37
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00530000063647.B.s #22
Capuchin	MODERN SPECIES	649																ENSCCAG00000026947 #22	ENSCCAG00000023896	ENSCCAG00000021428	ZNF711 (ENSCCAG00000025288)	POF1B (ENSCCAG00000033901)
Platyrrhini	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.t #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.a.a ##25	ENSGT01030000234570.d.b.a.a.a.b.a.a.b #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a.d #29	ENSGT00900000143559.a	ENSGT00940000154281.n ##29	ENSGT01060000249814	ENSGT00940000154281.m.a.c #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33
Cebidae	ANCESTRAL SPECIES	2	ENSGT00940000155250.p	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.t #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.a.a ##25	ENSGT01030000234570.d.b.a.a.a.b.a.a.a.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a.d #29	ENSGT00900000143559.a	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Cebidae_a	ANCESTRAL SPECIES	5	ENSGT00940000155250.p	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.t #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a.a.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143559.a	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Capuchin	MODERN SPECIES	96	RBMS2 (ENSCCAG00000030291)	ENSCCAG00000022716 #7	SPRYD4 (ENSCCAG00000028028) #8	MIP (ENSCCAG00000032355) #9	TIMELESS (ENSCCAG00000036271) #10	APOF (ENSCCAG00000025558) #11	STAT2 (ENSCCAG00000026474) #12	IL23A (ENSCCAG00000016182) #13	PAN2 (ENSCCAG00000036637) #14	CNPY2 (ENSCCAG00000028288) #15	CS (ENSCCAG00000033165) #16	COQ10A (ENSCCAG00000032473) #17	ANKRD52 (ENSCCAG00000020543) #18	SLC39A5 (ENSCCAG00000037965) #20	NABP2 (ENSCCAG00000030372) #21	ENSCCAG00000029583 #22	SMARCC2 (ENSCCAG00000023462) #23	MYL6 (ENSCCAG00000034648) ##25	ENSCCAG00000028306 #25	ESYT1 (ENSCCAG00000037028) #26	ENSCCAG00000020214 #27	ENSCCAG00000027265	ENSCCAG00000038067	ENSCCAG00000030569 ##29	ERBB3 (ENSCCAG00000034488) #30	DGKH (ENSCCAG00000033754)	AKAP11 (ENSCCAG00000021435)	ENSCCAG00000031576	ENSCCAG00000031208	TNFSF11 (ENSCCAG00000021412)	FAM216B (ENSCCAG00000020670)
Bolivian squirrel monkey	MODERN SPECIES	153	GLS2 (ENSSBOG00000026515) #7	SPRYD4 (ENSSBOG00000029755) #8	ENSSBOG00000027496	MIP (ENSSBOG00000027455) #9	TIMELESS (ENSSBOG00000020999) #10	APOF (ENSSBOG00000015890) #11	STAT2 (ENSSBOG00000020367) #12	IL23A (ENSSBOG00000023546) #13	PAN2 (ENSSBOG00000027343) #14	CNPY2 (ENSSBOG00000022645) #15	CS (ENSSBOG00000022936) #16	COQ10A (ENSSBOG00000007657) #17	ANKRD52 (ENSSBOG00000036251) #18	SLC39A5 (ENSSBOG00000034171) #20	NABP2 (ENSSBOG00000010714) #21	RNF41 (ENSSBOG00000003641) #22	SMARCC2 (ENSSBOG00000024572) #23	ENSSBOG00000030236 ##25	ESYT1 (ENSSBOG00000035398) #26	ZC3H10 (ENSSBOG00000019876) #27	ENSSBOG00000026997	ENSSBOG00000021015 #29	ERBB3 (ENSSBOG00000033752) #30	ENSSBOG00000022618	RPS26 (ENSSBOG00000032351) #31	IKZF4 (ENSSBOG00000020767) #32	SUOX (ENSSBOG00000034872) #33	RAB5B (ENSSBOG00000035419) #34	CDK2 (ENSSBOG00000035751) #35	PMEL (ENSSBOG00000016125) #36	DGKA (ENSSBOG00000035323) #37
Mas night monkey	MODERN SPECIES	1031	GLS2 (ENSANAG00000021030) #7	SPRYD4 (ENSANAG00000036275) #8	MIP (ENSANAG00000028757) #9	TIMELESS (ENSANAG00000035017) #10	APOF (ENSANAG00000026056) #11	STAT2 (ENSANAG00000032564) #12	IL23A (ENSANAG00000020935) #13	PAN2 (ENSANAG00000036468) #14	CNPY2 (ENSANAG00000038284) #15	CS (ENSANAG00000036325) #16	COQ10A (ENSANAG00000034472) #17	ANKRD52 (ENSANAG00000027086) #18	ENSANAG00000037861 #19	SLC39A5 (ENSANAG00000037530) #20	NABP2 (ENSANAG00000020737) #21	RNF41 (ENSANAG00000034135) #22	SMARCC2 (ENSANAG00000033886) #23	ENSANAG00000036848 #24	MYL6B (ENSANAG00000021453) #25	ESYT1 (ENSANAG00000019507) #26	ZC3H10 (ENSANAG00000004774) #27	ENSANAG00000011627	RPL41 (ENSANAG00000038487)	PA2G4 (ENSANAG00000036810) #29	ERBB3 (ENSANAG00000025783) #30	ENSANAG00000026759	ENSANAG00000029701	RPS26 (ENSANAG00000026303) #31	IKZF4 (ENSANAG00000027980) #32	SUOX (ENSANAG00000032655) #33	RAB5B (ENSANAG00000033215) #34
Tarsier	MODERN SPECIES	3647																RNF41 (ENSTSYG00000036728) #22
Strepsirrhini	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Lemuriformes	ANCESTRAL SPECIES	1	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Lemuriformes_a	ANCESTRAL SPECIES	27	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.m.a #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Coquerels sifaka	MODERN SPECIES	91	ENSPCOG00000016699	GLS2 (ENSPCOG00000019018) #7	SPRYD4 (ENSPCOG00000015229) #8	MIP (ENSPCOG00000020082) #9	TIMELESS (ENSPCOG00000018817) #10	APOF (ENSPCOG00000015999) #11	STAT2 (ENSPCOG00000016628) #12	IL23A (ENSPCOG00000016105) #13	PAN2 (ENSPCOG00000018263) #14	CNPY2 (ENSPCOG00000019272) #15	ENSPCOG00000019826 #16	COQ10A (ENSPCOG00000018212) #17	ANKRD52 (ENSPCOG00000015876) #18	SLC39A5 (ENSPCOG00000007171) #20	NABP2 (ENSPCOG00000014721) #21	RNF41 (ENSPCOG00000003362) #22	SMARCC2 (ENSPCOG00000027909) #23	MYL6 (ENSPCOG00000019144) #24	MYL6B (ENSPCOG00000008944) #25	ESYT1 (ENSPCOG00000008657) #26	ZC3H10 (ENSPCOG00000012389) #27	ENSPCOG00000027941	PA2G4 (ENSPCOG00000015514) #29	ERBB3 (ENSPCOG00000026346) #30	ENSPCOG00000027943 ##31	IKZF4 (ENSPCOG00000027845) #32	SUOX (ENSPCOG00000015024) #33	RAB5B (ENSPCOG00000016461) #34	CDK2 (ENSPCOG00000028348) #35	PMEL (ENSPCOG00000014006) #36	DGKA (ENSPCOG00000011621) #37
Greater bamboo lemur	MODERN SPECIES	128	ENSPSMG00000023721 #9	TIMELESS (ENSPSMG00000023752) #10	ENSPSMG00000023767	ENSPSMG00000023769 ##11	APOF (ENSPSMG00000023773) #11	STAT2 (ENSPSMG00000023810) #12	IL23A (ENSPSMG00000023824) #13	PAN2 (ENSPSMG00000023877) #14	CNPY2 (ENSPSMG00000023904) #15	CS (ENSPSMG00000023923) #16	COQ10A (ENSPSMG00000023940) #17	ANKRD52 (ENSPSMG00000023981) #18	ENSPSMG00000023999 #19	SLC39A5 (ENSPSMG00000024003) #20	NABP2 (ENSPSMG00000024009) #21	RNF41 (ENSPSMG00000024025) #22	SMARCC2 (ENSPSMG00000024187) #23	ENSPSMG00000024364 #25	ESYT1 (ENSPSMG00000024396) #26	ZC3H10 (ENSPSMG00000024404) #27	ENSPSMG00000024405	PA2G4 (ENSPSMG00000024418) #29	ERBB3 (ENSPSMG00000024473) #30	ENSPSMG00000024496 ##31	IKZF4 (ENSPSMG00000024506) #32	SUOX (ENSPSMG00000024511) #33	RAB5B (ENSPSMG00000024526) #34	CDK2 (ENSPSMG00000024548) #35	PMEL (ENSPSMG00000024579) #36	DGKA (ENSPSMG00000024610) #37	PYM1 (ENSPSMG00000024631)
Mouse lemur	MODERN SPECIES	29	RBMS2 (ENSMICG00000001075)	GLS2 (ENSMICG00000010158) #7	SPRYD4 (ENSMICG00000042006) #8	MIP (ENSMICG00000027583) #9	TIMELESS (ENSMICG00000000094) #10	APOF (ENSMICG00000000093) #11	STAT2 (ENSMICG00000000089) #12	IL23A (ENSMICG00000027017) #13	PAN2 (ENSMICG00000017661) #14	CNPY2 (ENSMICG00000046113) #15	CS (ENSMICG00000017659) #16	COQ10A (ENSMICG00000017658) #17	ANKRD52 (ENSMICG00000028491) #18	SLC39A5 (ENSMICG00000014494) #20	NABP2 (ENSMICG00000046909) #21	RNF41 (ENSMICG00000034714) #22	SMARCC2 (ENSMICG00000014448) #23	MYL6 (ENSMICG00000014433) #24	MYL6B (ENSMICG00000037488) #25	ESYT1 (ENSMICG00000014395) #26	ENSMICG00000028771	PA2G4 (ENSMICG00000044109) ##29	ERBB3 (ENSMICG00000014325) #30	ENSMICG00000036425	RPS26 (ENSMICG00000011041) #31	IKZF4 (ENSMICG00000011029) #32	SUOX (ENSMICG00000043722) #33	RAB5B (ENSMICG00000011086) #34	CDK2 (ENSMICG00000026391) #35	PMEL (ENSMICG00000011000) #36	DGKA (ENSMICG00000010975) #37
Bushbaby	MODERN SPECIES	158	BAZ2A (ENSOGAG00000003537)	RBMS2 (ENSOGAG00000003534)	GLS2 (ENSOGAG00000012811) #7	SPRYD4 (ENSOGAG00000005380) #8	MIP (ENSOGAG00000012810) #9	TIMELESS (ENSOGAG00000012808) #10	STAT2 (ENSOGAG00000001538) #12	IL23A (ENSOGAG00000027011) #13	PAN2 (ENSOGAG00000030620) #14	CNPY2 (ENSOGAG00000001536) #15	CS (ENSOGAG00000001533) #16	COQ10A (ENSOGAG00000001531) #17	ANKRD52 (ENSOGAG00000001529) #18	SLC39A5 (ENSOGAG00000001526) #20	NABP2 (ENSOGAG00000026514) #21	RNF41 (ENSOGAG00000001525) #22	SMARCC2 (ENSOGAG00000001522) #23	ENSOGAG00000034596 #24	ENSOGAG00000001521 #25	ESYT1 (ENSOGAG00000001514) #26	ZC3H10 (ENSOGAG00000030676) #27	PA2G4 (ENSOGAG00000001510) #29	ERBB3 (ENSOGAG00000001507) #30	IKZF4 (ENSOGAG00000034375) #32	SUOX (ENSOGAG00000007055) #33	RAB5B (ENSOGAG00000007054) #34	CDK2 (ENSOGAG00000007051) #35	PMEL (ENSOGAG00000007048) #36	DGKA (ENSOGAG00000007039) #37	PYM1 (ENSOGAG00000007038)	MMP19 (ENSOGAG00000001703)
Euarchontoglires_A	ANCESTRAL SPECIES	5	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Tree shrew	MODERN SPECIES	4346																RNF41 (ENSTBEG00000007375) #22
Glires	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Lagomorpha	ANCESTRAL SPECIES	30	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Rabbit	MODERN SPECIES	15	GLS2 (ENSOCUG00000016311) #7	SPRYD4 (ENSOCUG00000007787) #8	MIP (ENSOCUG00000022630) #9	TIMELESS (ENSOCUG00000012057) #10	ENSOCUG00000020893 ##11	APOF (ENSOCUG00000014297) #11	ENSOCUG00000030349 #12	IL23A (ENSOCUG00000007233) #13	PAN2 (ENSOCUG00000007227) #14	CNPY2 (ENSOCUG00000007224) #15	CS (ENSOCUG00000007216) #16	COQ10A (ENSOCUG00000007212) #17	ANKRD52 (ENSOCUG00000007206) #18	SLC39A5 (ENSOCUG00000007204) #20	NABP2 (ENSOCUG00000007200) #21	RNF41 (ENSOCUG00000010069) #22	SMARCC2 (ENSOCUG00000017375) #23	ENSOCUG00000017368 ##25	ESYT1 (ENSOCUG00000017352) #26	ZC3H10 (ENSOCUG00000017349) #27	RPL41 (ENSOCUG00000037702)	PA2G4 (ENSOCUG00000017342) ##29	ERBB3 (ENSOCUG00000017322) #30	IKZF4 (ENSOCUG00000012558) #32	SUOX (ENSOCUG00000000997) #33	ENSOCUG00000033043	RAB5B (ENSOCUG00000013895) #34	CDK2 (ENSOCUG00000000998) #35	PMEL (ENSOCUG00000000999) #36	DGKA (ENSOCUG00000021918) #37	PYM1 (ENSOCUG00000025969)
Pika	MODERN SPECIES	1642	BAZ2A (ENSOPRG00000001687)	RBMS2 (ENSOPRG00000001667)	GLS2 (ENSOPRG00000001636) #7	SPRYD4 (ENSOPRG00000001631) #8	MIP (ENSOPRG00000001623) #9	TIMELESS (ENSOPRG00000001561) #10	APOF (ENSOPRG00000001553) #11	STAT2 (ENSOPRG00000001512) #12	IL23A (ENSOPRG00000001506) #13	PAN2 (ENSOPRG00000001468) #14	CNPY2 (ENSOPRG00000001459) #15	CS (ENSOPRG00000001441) #16	COQ10A (ENSOPRG00000001423) #17	ANKRD52 (ENSOPRG00000001374) #18	SLC39A5 (ENSOPRG00000001356) #20	RNF41 (ENSOPRG00000001348) #22	SMARCC2 (ENSOPRG00000001315) #23	MYL6 (ENSOPRG00000001298) ##25	MYL6B (ENSOPRG00000001280) #25	ESYT1 (ENSOPRG00000001232) #26
Rodentia	ANCESTRAL SPECIES	5	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Sciuridae	ANCESTRAL SPECIES	14	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Marmotini	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Alpin marmot	MODERN SPECIES	11	GLS2 (ENSMMMG00000013386) #7	SPRYD4 (ENSMMMG00000013401) #8	MIP (ENSMMMG00000013405) #9	TIMELESS (ENSMMMG00000013421) #10	ENSMMMG00000013511 ##11	APOF (ENSMMMG00000013515) #11	STAT2 (ENSMMMG00000013531) #12	IL23A (ENSMMMG00000013576) #13	PAN2 (ENSMMMG00000013586) #14	CNPY2 (ENSMMMG00000013663) #15	CS (ENSMMMG00000013670) #16	COQ10A (ENSMMMG00000013679) #17	ANKRD52 (ENSMMMG00000013687) #18	SLC39A5 (ENSMMMG00000013736) #20	NABP2 (ENSMMMG00000013765) #21	RNF41 (ENSMMMG00000013786) #22	SMARCC2 (ENSMMMG00000013803) #23	ENSMMMG00000013894 #24	MYL6B (ENSMMMG00000013929) #25	ESYT1 (ENSMMMG00000013950) #26	ZC3H10 (ENSMMMG00000013999) #27	ENSMMMG00000014002	PA2G4 (ENSMMMG00000014012) ##29	ERBB3 (ENSMMMG00000014039) #30	ENSMMMG00000014087 ##31	IKZF4 (ENSMMMG00000014103) #32	SUOX (ENSMMMG00000014114) #33	RAB5B (ENSMMMG00000014124) #34	CDK2 (ENSMMMG00000014134) #35	PMEL (ENSMMMG00000014158) #36	DGKA (ENSMMMG00000014176) #37
Marmotini_b	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Arctic ground squirrel	MODERN SPECIES	197	GLS2 (ENSUPAG00010016072) #7	SPRYD4 (ENSUPAG00010016065) #8	MIP (ENSUPAG00010016061) #9	TIMELESS (ENSUPAG00010015979) #10	ENSUPAG00010015975 ##11	APOF (ENSUPAG00010015964) #11	STAT2 (ENSUPAG00010015949) #12	IL23A (ENSUPAG00010015944) #13	PAN2 (ENSUPAG00010015834) #14	CNPY2 (ENSUPAG00010015808) #15	CS (ENSUPAG00010015794) #16	COQ10A (ENSUPAG00010015779) #17	ANKRD52 (ENSUPAG00010015707) #18	SLC39A5 (ENSUPAG00010015699) #20	NABP2 (ENSUPAG00010015675) #21	RNF41 (ENSUPAG00010015656) #22	SMARCC2 (ENSUPAG00010015553) #23	MYL6 (ENSUPAG00010015434) #24	MYL6B (ENSUPAG00010015416) #25	ESYT1 (ENSUPAG00010015357) #26	ZC3H10 (ENSUPAG00010015354) #27	ENSUPAG00010015334	PA2G4 (ENSUPAG00010015303) ##29	ERBB3 (ENSUPAG00010015264) #30	RPS26 (ENSUPAG00010015248) ##31	IKZF4 (ENSUPAG00010015222) #32	SUOX (ENSUPAG00010015216) #33	RAB5B (ENSUPAG00010015197) #34	CDK2 (ENSUPAG00010015183) #35	PMEL (ENSUPAG00010015165) #36	DGKA (ENSUPAG00010015130) #37
Squirrel	MODERN SPECIES	246	BAZ2A (ENSSTOG00000013452)	RBMS2 (ENSSTOG00000013442)	GLS2 (ENSSTOG00000020896) #7	SPRYD4 (ENSSTOG00000024949) #8	MIP (ENSSTOG00000002295) #9	TIMELESS (ENSSTOG00000014170) #10	STAT2 (ENSSTOG00000015985) #12	IL23A (ENSSTOG00000015981) #13	PAN2 (ENSSTOG00000015974) #14	CNPY2 (ENSSTOG00000015971) #15	CS (ENSSTOG00000015969) #16	COQ10A (ENSSTOG00000015967) #17	ANKRD52 (ENSSTOG00000015950) #18	SLC39A5 (ENSSTOG00000015941) #20	NABP2 (ENSSTOG00000015937) #21	RNF41 (ENSSTOG00000003519) #22	SMARCC2 (ENSSTOG00000003479) #23	MYL6 (ENSSTOG00000023318) ##25	MYL6B (ENSSTOG00000003455) #25	ESYT1 (ENSSTOG00000007756) #26	ZC3H10 (ENSSTOG00000007753) #27	PA2G4 (ENSSTOG00000007732) ##29	ERBB3 (ENSSTOG00000024297) #30	ENSSTOG00000010559 ##31	IKZF4 (ENSSTOG00000010547) #32	SUOX (ENSSTOG00000010542) #33	RAB5B (ENSSTOG00000010536) #34	CDK2 (ENSSTOG00000000298) #35	PMEL (ENSSTOG00000000295) #36	DGKA (ENSSTOG00000000291) #37	PYM1 (ENSSTOG00000014206)
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	14	GLS2 (ENSSVLG00005008285) #7	ENSSVLG00005008222 #8	MIP (ENSSVLG00005008182) #9	TIMELESS (ENSSVLG00005007872) #10	ENSSVLG00005007805 ##11	APOF (ENSSVLG00005007709) #11	STAT2 (ENSSVLG00005007635) #12	IL23A (ENSSVLG00005007584) #13	PAN2 (ENSSVLG00005007533) #14	CNPY2 (ENSSVLG00005007500) #15	ENSSVLG00005007387 #16	ENSSVLG00005007322 #17	ANKRD52 (ENSSVLG00005007258) #18	SLC39A5 (ENSSVLG00005007185) #20	NABP2 (ENSSVLG00005007154) #21	ENSSVLG00005007088 #22	SMARCC2 (ENSSVLG00005006945) #23	MYL6 (ENSSVLG00005006811) ##25	ENSSVLG00005006773 #25	ESYT1 (ENSSVLG00005006727) #26	ZC3H10 (ENSSVLG00005006703) #27	ENSSVLG00005006677	PA2G4 (ENSSVLG00005003043) ##29	ERBB3 (ENSSVLG00005002867) #30	RPS26 (ENSSVLG00005002809) #31	IKZF4 (ENSSVLG00005002765) #32	SUOX (ENSSVLG00005002732) #33	RAB5B (ENSSVLG00005002700) #34	CDK2 (ENSSVLG00005002635) #35	PMEL (ENSSVLG00005002540) #36	DGKA (ENSSVLG00005002491) #37
Eurasian red squirrel	MODERN SPECIES	13	ZNF25 (ENSSVLG00005011690)	ENSSVLG00005011761	ENSSVLG00005011801	ENSSVLG00005011841	ENSSVLG00005011902	ENSSVLG00005011941	ENSSVLG00005011984	ENSSVLG00005012043	ENSSVLG00005012090	ENSSVLG00005012165	ENSSVLG00005012223	ENSSVLG00005012242	ENSSVLG00005012267	ENSSVLG00005012315	ENSSVLG00005012358	ENSSVLG00005012415 #22	TIMM29 (ENSSVLG00005012441)	ENSSVLG00005013113	ENSSVLG00005013196	RNF17 (ENSSVLG00005013672)	ENSSVLG00005013873	CENPJ (ENSSVLG00005013981)	PARP4 (ENSSVLG00005014213)	MPHOSPH8 (ENSSVLG00005015164)	PSPC1 (ENSSVLG00005015195)	ENSSVLG00005015231	ENSSVLG00005015259	ZMYM2 (ENSSVLG00005015358)	GJB2 (ENSSVLG00005015488)	GJB6 (ENSSVLG00005015504)	ENSSVLG00005015520
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.b.db ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.b.db ##31	ENSGT00390000002517.b.cb.a ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Guinea pig	MODERN SPECIES	9	RBMS2 (ENSCPOG00000008256)	GLS2 (ENSCPOG00000002352) #7	SPRYD4 (ENSCPOG00000002349) #8	MIP (ENSCPOG00000002347) #9	TIMELESS (ENSCPOG00000002338) #10	APOF (ENSCPOG00000014939) #11	STAT2 (ENSCPOG00000014930) #12	IL23A (ENSCPOG00000014926) #13	PAN2 (ENSCPOG00000014918) #14	CNPY2 (ENSCPOG00000020068) #15	CS (ENSCPOG00000014910) #16	COQ10A (ENSCPOG00000014909) #17	ANKRD52 (ENSCPOG00000014897) #18	SLC39A5 (ENSCPOG00000023730) #20	NABP2 (ENSCPOG00000014895) #21	RNF41 (ENSCPOG00000037094) #22	SMARCC2 (ENSCPOG00000033778) #23	MYL6 (ENSCPOG00000014880) ##25	MYL6B (ENSCPOG00000039293) #25	ESYT1 (ENSCPOG00000014871) #26	ZC3H10 (ENSCPOG00000032639) #27	ENSCPOG00000035776	PA2G4 (ENSCPOG00000014865) ##29	ERBB3 (ENSCPOG00000014852) #30	ENSCPOG00000023630 ##31	IKZF4 (ENSCPOG00000009964) #32	SUOX (ENSCPOG00000009957) #33	RAB5B (ENSCPOG00000034818) #34	CDK2 (ENSCPOG00000009952) #35	PMEL (ENSCPOG00000009940) #36	DGKA (ENSCPOG00000009927) #37
Hystricomorpha_b	ANCESTRAL SPECIES	13	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.b.db ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Long-tailed chinchilla	MODERN SPECIES	165	RBMS2 (ENSCLAG00000012661)	SPRYD4 (ENSCLAG00000013017) #8	GLS2 (ENSCLAG00000009741) #7	MIP (ENSCLAG00000009467) #9	TIMELESS (ENSCLAG00000012850) #10	APOF (ENSCLAG00000017022) #11	STAT2 (ENSCLAG00000012105) #12	IL23A (ENSCLAG00000011380) #13	PAN2 (ENSCLAG00000011700) #14	CNPY2 (ENSCLAG00000014215) #15	CS (ENSCLAG00000014833) #16	COQ10A (ENSCLAG00000016266) #17	ANKRD52 (ENSCLAG00000014540) #18	SLC39A5 (ENSCLAG00000011646) #20	NABP2 (ENSCLAG00000012948) #21	RNF41 (ENSCLAG00000011217) #22	SMARCC2 (ENSCLAG00000015921) #23	MYL6 (ENSCLAG00000008532) ##25	MYL6B (ENSCLAG00000014948) #25	ESYT1 (ENSCLAG00000011726) #26	ZC3H10 (ENSCLAG00000011346) #27	PA2G4 (ENSCLAG00000008851) ##29	ERBB3 (ENSCLAG00000010219) #30	ENSCLAG00000009250 ##31	IKZF4 (ENSCLAG00000009514) #32	SUOX (ENSCLAG00000013725) #33	RAB5B (ENSCLAG00000012165) #34	CDK2 (ENSCLAG00000010351) #35	PMEL (ENSCLAG00000010642) #36	DGKA (ENSCLAG00000008477) #37	PYM1 (ENSCLAG00000007964)
Degu	MODERN SPECIES	328	ENSODEG00000006174 ##7	ENSODEG00000006227 #7	SPRYD4 (ENSODEG00000006258) #8	MIP (ENSODEG00000006269) #9	TIMELESS (ENSODEG00000006692) #10	APOF (ENSODEG00000006931) #11	STAT2 (ENSODEG00000006968) #12	IL23A (ENSODEG00000007085) #13	PAN2 (ENSODEG00000007203) #14	ENSODEG00000004820	CNPY2 (ENSODEG00000004835) #15	COQ10A (ENSODEG00000004912) #17	ANKRD52 (ENSODEG00000004946) #18	SLC39A5 (ENSODEG00000005029) #20	ENSODEG00000005221 #21	RNF41 (ENSODEG00000005264) #22	SMARCC2 (ENSODEG00000005333) #23	ENSODEG00000007353 ##25	MYL6B (ENSODEG00000007392) #25	ESYT1 (ENSODEG00000007684) #26	ZC3H10 (ENSODEG00000007942) #27	ENSODEG00000007957	ENSODEG00000007992 ##29	ERBB3 (ENSODEG00000008152) #30	ENSODEG00000008351	ENSODEG00000018952	ENSODEG00000003797 ##31	IKZF4 (ENSODEG00000003820) #32	SUOX (ENSODEG00000003849) #33	RAB5B (ENSODEG00000003860) #34	CDK2 (ENSODEG00000003907) #35
Naked mole-rat female	MODERN SPECIES	8	GLS2 (ENSHGLG00000013406) #7	SPRYD4 (ENSHGLG00000016750) #8	MIP (ENSHGLG00000016789) #9	TIMELESS (ENSHGLG00000016404) #10	APOF (ENSHGLG00000008028) #11	STAT2 (ENSHGLG00000016677) #12	IL23A (ENSHGLG00000038635) #13	PAN2 (ENSHGLG00000005647) #14	CNPY2 (ENSHGLG00000005988) #15	ENSHGLG00000006836 #16	ENSHGLG00000049591	COQ10A (ENSHGLG00000008142) #17	ANKRD52 (ENSHGLG00000011688) #18	SLC39A5 (ENSHGLG00000018904) #20	NABP2 (ENSHGLG00000017829) #21	RNF41 (ENSHGLG00000013339) #22	SMARCC2 (ENSHGLG00000015948) #23	MYL6 (ENSHGLG00000012352) #24	ENSHGLG00000018088 #25	ENSHGLG00000015748 #26	ZC3H10 (ENSHGLG00000015956) #27	ENSHGLG00000011936 ##29	ERBB3 (ENSHGLG00000014143) #30	ENSHGLG00000016616 ##31	IKZF4 (ENSHGLG00000032729) #32	SUOX (ENSHGLG00000044861) #33	RAB5B (ENSHGLG00000005995) #34	CDK2 (ENSHGLG00000007168) #35	PMEL (ENSHGLG00000008476) #36	DGKA (ENSHGLG00000015804) #37	PYM1 (ENSHGLG00000017155)
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Muroidea	ANCESTRAL SPECIES	5	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Muroidea_A	ANCESTRAL SPECIES	22	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Cricetidae	ANCESTRAL SPECIES	21	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Cricetinae	ANCESTRAL SPECIES	22	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Golden Hamster	MODERN SPECIES	710	ENSMAUG00000016984	Gls2 (ENSMAUG00000019243) #7	Spryd4 (ENSMAUG00000018363) #8	Mip (ENSMAUG00000012086) #9	ENSMAUG00000010695 #10	Apof (ENSMAUG00000017165) #11	Stat2 (ENSMAUG00000012842) #12	Il23a (ENSMAUG00000011310) #13	Pan2 (ENSMAUG00000012602) #14	Cnpy2 (ENSMAUG00000001150) #15	ENSMAUG00000020525 #16	Coq10a (ENSMAUG00000010816) #17	Ankrd52 (ENSMAUG00000016598) #18	Slc39a5 (ENSMAUG00000009609) #20	Nabp2 (ENSMAUG00000002611) #21	Rnf41 (ENSMAUG00000000490) #22	Smarcc2 (ENSMAUG00000001032) #23	ENSMAUG00000019259 ##25	Myl6b (ENSMAUG00000019890) #25	Esyt1 (ENSMAUG00000009823) #26	Zc3h10 (ENSMAUG00000008505) #27	ENSMAUG00000001917	Pa2g4 (ENSMAUG00000011829) ##29	Rps26 (ENSMAUG00000007947) #31	Ikzf4 (ENSMAUG00000016146) #32	Suox (ENSMAUG00000012561) #33	Rab5b (ENSMAUG00000011613) #34	Cdk2 (ENSMAUG00000019327) #35	Pmel (ENSMAUG00000017353) #36	Dgka (ENSMAUG00000018408) #37	Pym1 (ENSMAUG00000007318)
Chinese hamster chok1gshd	MODERN SPECIES	352	Spryd4 (ENSCGRG00001016587) #8	Mip (ENSCGRG00001020147) #9	Timeless (ENSCGRG00001012271) #10	ENSCGRG00001001978 ##11	Apof (ENSCGRG00001021570) #11	Stat2 (ENSCGRG00001011774) #12	Il23a (ENSCGRG00001004465) #13	Pan2 (ENSCGRG00001019707) #14	Cnpy2 (ENSCGRG00001013192) #15	ENSCGRG00001012140 #16	Coq10a (ENSCGRG00001023064) #17	ENSCGRG00001023374	Ankrd52 (ENSCGRG00001021056) #18	Slc39a5 (ENSCGRG00001004371) #20	Nabp2 (ENSCGRG00001022709) #21	Rnf41 (ENSCGRG00001013332) #22	Smarcc2 (ENSCGRG00001008769) #23	ENSCGRG00001012450 ##25	Myl6b (ENSCGRG00001019820) #25	Esyt1 (ENSCGRG00001017349) #26	Zc3h10 (ENSCGRG00001004310) #27	ENSCGRG00001000863	Pa2g4 (ENSCGRG00001015234) ##29	Erbb3 (ENSCGRG00001001394) #30	ENSCGRG00001011851 #31	Ikzf4 (ENSCGRG00001013051) #32	Suox (ENSCGRG00001022965) #33	Rab5b (ENSCGRG00001000428) #34	Cdk2 (ENSCGRG00001013650) #35	Pmel (ENSCGRG00001010954) #36	Dgka (ENSCGRG00001013601) #37
Cricetidae_B	ANCESTRAL SPECIES	35	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Prairie vole	MODERN SPECIES	182	Rbms2 (ENSMOCG00000015140)	Gls2 (ENSMOCG00000006273) #7	Spryd4 (ENSMOCG00000021819) #8	Mip (ENSMOCG00000016991) #9	ENSMOCG00000019429 #10	Apof (ENSMOCG00000012603) #11	Stat2 (ENSMOCG00000005506) #12	Il23a (ENSMOCG00000014943) #13	Pan2 (ENSMOCG00000007191) #14	Cnpy2 (ENSMOCG00000014978) #15	ENSMOCG00000003452 #16	Coq10a (ENSMOCG00000002793) #17	Ankrd52 (ENSMOCG00000000087) #18	Slc39a5 (ENSMOCG00000009064) #20	Nabp2 (ENSMOCG00000020813) #21	Rnf41 (ENSMOCG00000019237) #22	Smarcc2 (ENSMOCG00000005516) #23	ENSMOCG00000011540 ##25	Myl6b (ENSMOCG00000009171) #25	Esyt1 (ENSMOCG00000009993) #26	Zc3h10 (ENSMOCG00000019869) #27	ENSMOCG00000012870	Pa2g4 (ENSMOCG00000002004) ##29	Erbb3 (ENSMOCG00000018658) #30	ENSMOCG00000009275 ##31	Ikzf4 (ENSMOCG00000006780) #32	Suox (ENSMOCG00000004233) #33	ENSMOCG00000013073 #34	Cdk2 (ENSMOCG00000005645) #35	Pmel (ENSMOCG00000012505) #36	Dgka (ENSMOCG00000021050) #37
Northern American deer mouse	MODERN SPECIES	9	Cpsf6 (ENSPEMG00000007973)	ENSPEMG00000026013	ENSPEMG00000029024	ENSPEMG00000027132	ENSPEMG00000028224	ENSPEMG00000031320	Apof (ENSPEMG00000011095) #11	Stat2 (ENSPEMG00000015177) #12	Il23a (ENSPEMG00000028362) #13	Pan2 (ENSPEMG00000018505) #14	Cnpy2 (ENSPEMG00000015275) #15	Coq10a (ENSPEMG00000011054) #17	Ankrd52 (ENSPEMG00000009597) #18	Slc39a5 (ENSPEMG00000016720) #20	Nabp2 (ENSPEMG00000013415) #21	Rnf41 (ENSPEMG00000016813) #22	Smarcc2 (ENSPEMG00000016959) #23	ENSPEMG00000015822 ##25	Myl6b (ENSPEMG00000015424) #25	Esyt1 (ENSPEMG00000009956) #26	Zc3h10 (ENSPEMG00000008278) #27	ENSPEMG00000030589	Pa2g4 (ENSPEMG00000013344) ##29	Erbb3 (ENSPEMG00000008685) #30	Rps26 (ENSPEMG00000008549) #31	Ikzf4 (ENSPEMG00000009219) #32	Suox (ENSPEMG00000015726) #33	ENSPEMG00000030783 #34	Cdk2 (ENSPEMG00000009789) #35	Pmel (ENSPEMG00000011719) #36	Dgka (ENSPEMG00000015750) #37
Murinae	ANCESTRAL SPECIES	22	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Mus	ANCESTRAL SPECIES	23	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.s #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143379	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Mus_A	DUPLICATION
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.s #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.w #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143379	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.s #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.w #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143379	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Mouse	MODERN SPECIES	1	Gls2 (ENSMUSG00000044005) #7	Spryd4 (ENSMUSG00000051346) #8	Mip (ENSMUSG00000025389) #9	Timeless (ENSMUSG00000039994) #10	Apon (ENSMUSG00000051716) ##11	Apof (ENSMUSG00000047631) #11	Stat2 (ENSMUSG00000040033) #12	Il23a (ENSMUSG00000025383) #13	Pan2 (ENSMUSG00000005682) #14	Cnpy2 (ENSMUSG00000025381) #15	Cs (ENSMUSG00000005683) #16	Coq10a (ENSMUSG00000039914) #17	Ankrd52 (ENSMUSG00000014498) #18	Slc39a5 (ENSMUSG00000039878) #20	Nabp2 (ENSMUSG00000025374) #21	Rnf41 (ENSMUSG00000025373) #22	Smarcc2 (ENSMUSG00000025369) #23	Myl6 (ENSMUSG00000090841) #24	Myl6b (ENSMUSG00000039824) #25	Esyt1 (ENSMUSG00000025366) #26	Zc3h10 (ENSMUSG00000039810) #27	Rpl41 (ENSMUSG00000093674)	Pa2g4 (ENSMUSG00000025364) ##29	Erbb3 (ENSMUSG00000018166) #30	Rps26 (ENSMUSG00000025362) #31	Ikzf4 (ENSMUSG00000002578) #32	Suox (ENSMUSG00000049858) #33	Rab5b (ENSMUSG00000000711) #34	Cdk2 (ENSMUSG00000025358) #35	Pmel (ENSMUSG00000025359) #36	Dgka (ENSMUSG00000025357) #37
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.s #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.w #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00900000143379	ENSGT00940000154281.n ##29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
spretus	MODERN SPECIES	1	Gls2 (MGP_SPRETEiJ_G0016747) #7	Spryd4 (MGP_SPRETEiJ_G0016748) #8	Mip (MGP_SPRETEiJ_G0016749) #9	Timeless (MGP_SPRETEiJ_G0016750) #10	Apon (MGP_SPRETEiJ_G0016751) ##11	Apof (MGP_SPRETEiJ_G0016752) #11	Stat2 (MGP_SPRETEiJ_G0016753) #12	Il23a (MGP_SPRETEiJ_G0016754) #13	Pan2 (MGP_SPRETEiJ_G0016755) #14	Cnpy2 (MGP_SPRETEiJ_G0016756) #15	Cs (MGP_SPRETEiJ_G0016757) #16	Coq10a (MGP_SPRETEiJ_G0016758) #17	Ankrd52 (MGP_SPRETEiJ_G0016759) #18	Slc39a5 (MGP_SPRETEiJ_G0016760) #20	Nabp2 (MGP_SPRETEiJ_G0016761) #21	Rnf41 (MGP_SPRETEiJ_G0016762) #22	Smarcc2 (MGP_SPRETEiJ_G0016763) #23	MGP_SPRETEiJ_G0016764 #24	Myl6b (MGP_SPRETEiJ_G0016765) #25	Esyt1 (MGP_SPRETEiJ_G0016766) #26	Zc3h10 (MGP_SPRETEiJ_G0016767) #27	Rpl41 (MGP_SPRETEiJ_G0016768)	Pa2g4 (MGP_SPRETEiJ_G0016769) ##29	Erbb3 (MGP_SPRETEiJ_G0016770) #30	MGP_SPRETEiJ_G0016771 ##31	Ikzf4 (MGP_SPRETEiJ_G0016772) #32	Suox (MGP_SPRETEiJ_G0016773) #33	Rab5b (MGP_SPRETEiJ_G0016774) #34	Cdk2 (MGP_SPRETEiJ_G0016775) #35	Pmel (MGP_SPRETEiJ_G0016776) #36	Dgka (MGP_SPRETEiJ_G0016777) #37
Steppe mouse	MODERN SPECIES	2674	Gls2 (ENSMSIG00000007430) #7	Spryd4 (ENSMSIG00000007508) #8	Mip (ENSMSIG00000007522) #9	Timeless (ENSMSIG00000007572) #10	Apon (ENSMSIG00000007837) ##11	Apof (ENSMSIG00000007852) #11	Stat2 (ENSMSIG00000007867) #12	Il23a (ENSMSIG00000007967) #13	Pan2 (ENSMSIG00000007997) #14	ENSMSIG00000008203 #15	Cs (ENSMSIG00000008245) #16	Coq10a (ENSMSIG00000008277) #17	Ankrd52 (ENSMSIG00000008363) #18	Slc39a5 (ENSMSIG00000008443) #20	ENSMSIG00000008469 #21	Rnf41 (ENSMSIG00000008526) #22	Smarcc2 (ENSMSIG00000008570) #23	ENSMSIG00000008907 ##25	Myl6b (ENSMSIG00000009287) #25
Ryukyu mouse	MODERN SPECIES	1	Gls2 (MGP_CAROLIEiJ_G0015922) #7	Spryd4 (MGP_CAROLIEiJ_G0015923) #8	Mip (MGP_CAROLIEiJ_G0015924) #9	Timeless (MGP_CAROLIEiJ_G0015925) #10	Apon (MGP_CAROLIEiJ_G0015926) ##11	Apof (MGP_CAROLIEiJ_G0015927) #11	Stat2 (MGP_CAROLIEiJ_G0015928) #12	Il23a (MGP_CAROLIEiJ_G0015929) #13	Pan2 (MGP_CAROLIEiJ_G0015930) #14	Cnpy2 (MGP_CAROLIEiJ_G0015931) #15	Cs (MGP_CAROLIEiJ_G0015932) #16	Coq10a (MGP_CAROLIEiJ_G0015933) #17	Ankrd52 (MGP_CAROLIEiJ_G0015934) #18	Slc39a5 (MGP_CAROLIEiJ_G0015935) #20	Nabp2 (MGP_CAROLIEiJ_G0015936) #21	Rnf41 (MGP_CAROLIEiJ_G0015937) #22	Smarcc2 (MGP_CAROLIEiJ_G0015938) #23	MGP_CAROLIEiJ_G0015939 ##25	Myl6b (MGP_CAROLIEiJ_G0015940) #25	Esyt1 (MGP_CAROLIEiJ_G0015941) #26	Zc3h10 (MGP_CAROLIEiJ_G0015942) #27	Rpl41 (MGP_CAROLIEiJ_G0015943)	Pa2g4 (MGP_CAROLIEiJ_G0015944) ##29	Erbb3 (MGP_CAROLIEiJ_G0015945) #30	Rps26 (MGP_CAROLIEiJ_G0015946) #31	Ikzf4 (MGP_CAROLIEiJ_G0015947) #32	Suox (MGP_CAROLIEiJ_G0015948) #33	MGP_CAROLIEiJ_G0015949 #34	Cdk2 (MGP_CAROLIEiJ_G0015950) #35	Pmel (MGP_CAROLIEiJ_G0015951) #36	Dgka (MGP_CAROLIEiJ_G0015952) #37
Mus_A	ANCESTRAL SPECIES																	ENSGT00530000063647.B.x #22
Mus_B	ANCESTRAL SPECIES																	ENSGT00530000063647.B.x #22
Mus_C	ANCESTRAL SPECIES																	ENSGT00530000063647.B.x #22
Steppe mouse	MODERN SPECIES	1124																ENSMSIG00000004590 #22
Shrew mouse	MODERN SPECIES	22	Gls2 (MGP_PahariEiJ_G0031162) #7	Spryd4 (MGP_PahariEiJ_G0031161) #8	Mip (MGP_PahariEiJ_G0031160) #9	Timeless (MGP_PahariEiJ_G0031159) #10	MGP_PahariEiJ_G0031158	MGP_PahariEiJ_G0031157 #11	MGP_PahariEiJ_G0031156 #12	Il23a (MGP_PahariEiJ_G0031155) #13	Pan2 (MGP_PahariEiJ_G0031154) #14	Cnpy2 (MGP_PahariEiJ_G0031153) #15	Cs (MGP_PahariEiJ_G0031152) #16	Coq10a (MGP_PahariEiJ_G0031151) #17	Slc39a5 (MGP_PahariEiJ_G0031150) #20	MGP_PahariEiJ_G0031149 #18	Nabp2 (MGP_PahariEiJ_G0031148) #21	Rnf41 (MGP_PahariEiJ_G0031147) #22	Smarcc2 (MGP_PahariEiJ_G0031146) #23	MGP_PahariEiJ_G0031145 ##25	Myl6b (MGP_PahariEiJ_G0031144) #25	Esyt1 (MGP_PahariEiJ_G0031143) #26	Zc3h10 (MGP_PahariEiJ_G0031142) #27	Rpl41 (MGP_PahariEiJ_G0031141)	Pa2g4 (MGP_PahariEiJ_G0031140) ##29	Erbb3 (MGP_PahariEiJ_G0031139) #30	MGP_PahariEiJ_G0031138 ##31	Ikzf4 (MGP_PahariEiJ_G0031137) #32	Suox (MGP_PahariEiJ_G0031136) #33	Rab5b (MGP_PahariEiJ_G0031135) #34	Cdk2 (MGP_PahariEiJ_G0031134) #35	Pmel (MGP_PahariEiJ_G0031133) #36	Dgka (MGP_PahariEiJ_G0031132) #37
Rat	MODERN SPECIES	17	Rbms2 (ENSRNOG00000003076)	Gls2 (ENSRNOG00000031612) #7	Spryd4 (ENSRNOG00000003127) #8	Mip (ENSRNOG00000003132) #9	Timeless (ENSRNOG00000031916) #10	Apon (ENSRNOG00000033466) ##11	Stat2 (ENSRNOG00000031081) #12	Il23a (ENSRNOG00000003254) #13	Pan2 (ENSRNOG00000032441) #14	Cnpy2 (ENSRNOG00000003549) #15	Cs (ENSRNOG00000023520) #16	Coq10a (ENSRNOG00000029571) #17	Ankrd52 (ENSRNOG00000030597) #18	Slc39a5 (ENSRNOG00000033361) #20	Nabp2 (ENSRNOG00000023480) #21	Rnf41 (ENSRNOG00000023456) #22	Smarcc2 (ENSRNOG00000031135) #23	Myl6 (ENSRNOG00000054140) ##25	LOC120093525 (ENSRNOG00000028837) #25	Esyt1 (ENSRNOG00000060753) #26	Rps15-ps2 (ENSRNOG00000043026)	Zc3h10 (ENSRNOG00000040281) #27	Pa2g4 (ENSRNOG00000004904) ##29	Erbb3 (ENSRNOG00000004964) #30	Ikzf4 (ENSRNOG00000005535) #32	Suox (ENSRNOG00000005987) #33	Rab5b (ENSRNOG00000006130) #34	Cdk2 (ENSRNOG00000006469) #35	Pmel (ENSRNOG00000023085) #36	Dgka (ENSRNOG00000022943) #37	ENSRNOG00000066475
Upper Galilee mountains blind mole rat	MODERN SPECIES	1451						Apof (ENSNGAG00000000884) #11	Stat2 (ENSNGAG00000000012) #12	Il23a (ENSNGAG00000018772) #13	Pan2 (ENSNGAG00000007930) #14	Cnpy2 (ENSNGAG00000001091) #15	ENSNGAG00000000649 #16	Coq10a (ENSNGAG00000000278) #17	Ankrd52 (ENSNGAG00000001572) #18	Slc39a5 (ENSNGAG00000000282) #20	Nabp2 (ENSNGAG00000020105) #21	Rnf41 (ENSNGAG00000016706) #22	Smarcc2 (ENSNGAG00000002443) #23	ENSNGAG00000016081 ##25	Myl6b (ENSNGAG00000013708) #25	Esyt1 (ENSNGAG00000013567) #26	Zc3h10 (ENSNGAG00000011848) #27	ENSNGAG00000011600	Pa2g4 (ENSNGAG00000000202) ##29	Erbb3 (ENSNGAG00000013267) #30	ENSNGAG00000007242 ##31	ENSNGAG00000001224	Ikzf4 (ENSNGAG00000000552) #32	Suox (ENSNGAG00000018617) #33	Rab5b (ENSNGAG00000018216) #34	Cdk2 (ENSNGAG00000018808) #35	Pmel (ENSNGAG00000012903) #36
Lesser Egyptian jerboa	MODERN SPECIES	42	ENSJJAG00000021434	Baz2a (ENSJJAG00000009782)	ENSJJAG00000015940	Gls2 (ENSJJAG00000021800) #7	Spryd4 (ENSJJAG00000011088) #8	Mip (ENSJJAG00000018656) #9	Timeless (ENSJJAG00000010259) #10	Stat2 (ENSJJAG00000014738) #12	Il23a (ENSJJAG00000018889) #13	Pan2 (ENSJJAG00000013044) #14	Cnpy2 (ENSJJAG00000020135) #15	ENSJJAG00000024275 #16	Ankrd52 (ENSJJAG00000019796) #18	Slc39a5 (ENSJJAG00000010955) #20	Nabp2 (ENSJJAG00000024279) #21	Rnf41 (ENSJJAG00000013618) #22	Smarcc2 (ENSJJAG00000010701) #23	ENSJJAG00000019349 ##25	Myl6b (ENSJJAG00000019772) #25	Esyt1 (ENSJJAG00000023925) #26	Zc3h10 (ENSJJAG00000001726) #27	ENSJJAG00000024377	Pa2g4 (ENSJJAG00000024317) ##29	Erbb3 (ENSJJAG00000021056) #30	ENSJJAG00000022377 ##31	Ikzf4 (ENSJJAG00000017699) #32	Suox (ENSJJAG00000020059) #33	Rab5b (ENSJJAG00000019506) #34	Cdk2 (ENSJJAG00000004099) #35	Pmel (ENSJJAG00000012480) #36	Dgka (ENSJJAG00000009134) #37
Kangaroo rat	MODERN SPECIES	322	Baz2a (ENSDORG00000009234)	Rbms2 (ENSDORG00000009231)	Gls2 (ENSDORG00000001951) #7	Spryd4 (ENSDORG00000029899) #8	Mip (ENSDORG00000006382) #9	Timeless (ENSDORG00000007148) #10	Stat2 (ENSDORG00000012958) #12	Il23a (ENSDORG00000012955) #13	Pan2 (ENSDORG00000012951) #14	Cnpy2 (ENSDORG00000012950) #15	ENSDORG00000012948 #16	Coq10a (ENSDORG00000012947) #17	Ankrd52 (ENSDORG00000012944) #18	Slc39a5 (ENSDORG00000012941) #20	Nabp2 (ENSDORG00000012936) #21	Rnf41 (ENSDORG00000012935) #22	Smarcc2 (ENSDORG00000001085) #23	ENSDORG00000001084 ##25	Myl6b (ENSDORG00000001083) #25	Esyt1 (ENSDORG00000001082) #26	Zc3h10 (ENSDORG00000001081) #27	ENSDORG00000023599	Pa2g4 (ENSDORG00000001080) ##29	Erbb3 (ENSDORG00000001076) #30	Rps26 (ENSDORG00000001151) #31	Ikzf4 (ENSDORG00000015397) #32	Suox (ENSDORG00000029031) #33	Rab5b (ENSDORG00000025063) #34	Cdk2 (ENSDORG00000008276) #35	Pmel (ENSDORG00000005882) #36	Dgka (ENSDORG00000005880) #37
Laurasiatheria	ANCESTRAL SPECIES	6	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34
Laurasiatheria_a	ANCESTRAL SPECIES	6	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35
Artiodactyla	ANCESTRAL SPECIES	6	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Suina	ANCESTRAL SPECIES	4	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Chacoan peccary	MODERN SPECIES	900	GLS2 (ENSCWAG00000004785) #7	SPRYD4 (ENSCWAG00000004942) #8	MIP (ENSCWAG00000004953) #9	TIMELESS (ENSCWAG00000004988) #10	ENSCWAG00000005148 ##11	APOF (ENSCWAG00000005160) #11	STAT2 (ENSCWAG00000005182) #12	IL23A (ENSCWAG00000005239) #13	PAN2 (ENSCWAG00000005280) #14	CNPY2 (ENSCWAG00000005326) #15	CS (ENSCWAG00000005353) #16	COQ10A (ENSCWAG00000005423) #17	ANKRD52 (ENSCWAG00000005542) #18	SLC39A5 (ENSCWAG00000005681) #20	NABP2 (ENSCWAG00000005729) #21	RNF41 (ENSCWAG00000005761) #22	SMARCC2 (ENSCWAG00000005828) #23	MYL6 (ENSCWAG00000006008) ##25	MYL6B (ENSCWAG00000006123) #25	ESYT1 (ENSCWAG00000006191) #26	ZC3H10 (ENSCWAG00000006227) #27	ENSCWAG00000006236	ENSCWAG00000006270 #29	ERBB3 (ENSCWAG00000006414) #30	ENSCWAG00000006680 ##31	IKZF4 (ENSCWAG00000006717) #32	SUOX (ENSCWAG00000006796) #33	RAB5B (ENSCWAG00000006812) #34	CDK2 (ENSCWAG00000006872) #35	PMEL (ENSCWAG00000007047) #36	DGKA (ENSCWAG00000007372) #37
Pig	MODERN SPECIES	13	RBMS2 (ENSSSCG00000000402)	GLS2 (ENSSSCG00000000401) #7	SPRYD4 (ENSSSCG00000028066) #8	MIP (ENSSSCG00000000400) #9	TIMELESS (ENSSSCG00000000399) #10	APOF (ENSSSCG00000000398) ##11	STAT2 (ENSSSCG00000000396) #12	IL23A (ENSSSCG00000033520) #13	PAN2 (ENSSSCG00000000393) #14	CNPY2 (ENSSSCG00000000394) #15	CS (ENSSSCG00000035686) #16	COQ10A (ENSSSCG00000025190) #17	ANKRD52 (ENSSSCG00000000386) #18	SLC39A5 (ENSSSCG00000000385) #20	NABP2 (ENSSSCG00000000384) #21	RNF41 (ENSSSCG00000000383) #22	SMARCC2 (ENSSSCG00000000382) #23	MYL6 (ENSSSCG00000039506) #24	MYL6B (ENSSSCG00000063428) #25	ESYT1 (ENSSSCG00000000379) #26	ZC3H10 (ENSSSCG00000033568) #27	ENSSSCG00000033310	ENSSSCG00000000377 #29	ERBB3 (ENSSSCG00000020725) #30	RPS26 (ENSSSCG00000053807) ##31	IKZF4 (ENSSSCG00000031139) #32	SUOX (ENSSSCG00000000376) #33	RAB5B (ENSSSCG00000062039) #34	CDK2 (ENSSSCG00000037597) #35	PMEL (ENSSSCG00000000371) #36	DGKA (ENSSSCG00000000370) #37
Artiodactyla_a	ANCESTRAL SPECIES	5	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Artiodactyla_b	ANCESTRAL SPECIES	5	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Cetacea	ANCESTRAL SPECIES	8	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Odontoceti	ANCESTRAL SPECIES	7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.c.a #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Odontoceti_a	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b.hb ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.c.a #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Dolphin	MODERN SPECIES	2233			GLS2 (ENSTTRG00000007176) #7	SPRYD4 (ENSTTRG00000007174) #8	MIP (ENSTTRG00000007173) #9	TIMELESS (ENSTTRG00000007167) #10	STAT2 (ENSTTRG00000007159) #12	ENSTTRG00000007156 #13	PAN2 (ENSTTRG00000007150) #14	CNPY2 (ENSTTRG00000007146) #15	CS (ENSTTRG00000007139) #16	COQ10A (ENSTTRG00000007126) #17	ANKRD52 (ENSTTRG00000007106) #18	SLC39A5 (ENSTTRG00000007097) #20	NABP2 (ENSTTRG00000007083) #21	RNF41 (ENSTTRG00000007068) #22
Odontoceti_b	ANCESTRAL SPECIES	7	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b.hb ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.c.a #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Vaquita	MODERN SPECIES	1	GLS2 (ENSPSNG00000007903) #7	SPRYD4 (ENSPSNG00000008071) #8	MIP (ENSPSNG00000008094) #9	TIMELESS (ENSPSNG00000008209) #10	ENSPSNG00000008282 ##11	APOF (ENSPSNG00000008312) #11	STAT2 (ENSPSNG00000008353) #12	IL23A (ENSPSNG00000008386) #13	PAN2 (ENSPSNG00000008437) #14	CNPY2 (ENSPSNG00000008498) #15	CS (ENSPSNG00000008567) #16	COQ10A (ENSPSNG00000008712) #17	ANKRD52 (ENSPSNG00000008780) #18	SLC39A5 (ENSPSNG00000008839) #20	NABP2 (ENSPSNG00000008913) #21	RNF41 (ENSPSNG00000008952) #22	SMARCC2 (ENSPSNG00000009047) #23	MYL6B (ENSPSNG00000009322) #25	ESYT1 (ENSPSNG00000009666) #26	ZC3H10 (ENSPSNG00000009797) #27	ENSPSNG00000009824	PA2G4 (ENSPSNG00000009869) #29	ERBB3 (ENSPSNG00000009983) #30	ENSPSNG00000010622 #31	IKZF4 (ENSPSNG00000010678) #32	SUOX (ENSPSNG00000010858) #33	ENSPSNG00000010918 #34	CDK2 (ENSPSNG00000011014) #35	PMEL (ENSPSNG00000011151) #36	DGKA (ENSPSNG00000011462) #37	PYM1 (ENSPSNG00000011582)
Monodontidae	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b.hb ##31	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756.c.a #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Beluga whale	MODERN SPECIES	39	RBMS2 (ENSDLEG00000005536)	GLS2 (ENSDLEG00000005634) #7	SPRYD4 (ENSDLEG00000005656) #8	MIP (ENSDLEG00000005665) #9	TIMELESS (ENSDLEG00000005692) #10	ENSDLEG00000005775 ##11	APOF (ENSDLEG00000005801) #11	STAT2 (ENSDLEG00000005822) #12	IL23A (ENSDLEG00000005833) #13	PAN2 (ENSDLEG00000005845) #14	CNPY2 (ENSDLEG00000005916) #16	COQ10A (ENSDLEG00000005975) #17	ANKRD52 (ENSDLEG00000005988) #18	SLC39A5 (ENSDLEG00000006027) #20	NABP2 (ENSDLEG00000006038) #21	RNF41 (ENSDLEG00000006051) #22	SMARCC2 (ENSDLEG00000006081) #23	MYL6 (ENSDLEG00000006158) #24	MYL6B (ENSDLEG00000006224) #25	ESYT1 (ENSDLEG00000006239) #26	ZC3H10 (ENSDLEG00000006252) #27	PA2G4 (ENSDLEG00000006255) #29	ERBB3 (ENSDLEG00000006272) #30	ENSDLEG00000006287 ##31	IKZF4 (ENSDLEG00000006296) #32	SUOX (ENSDLEG00000006309) #33	RAB5B (ENSDLEG00000006313) #34	CDK2 (ENSDLEG00000006324) #35	ENSDLEG00000006333 #36	DGKA (ENSDLEG00000006356) #37	PYM1 (ENSDLEG00000006387)
Narwhal	MODERN SPECIES	313	ENSMMNG00015020030	GLS2 (ENSMMNG00015019958) #7	SPRYD4 (ENSMMNG00015019937) #8	MIP (ENSMMNG00015019920) #9	TIMELESS (ENSMMNG00015019865) #10	APOF (ENSMMNG00015019831) #11	STAT2 (ENSMMNG00015019784) #12	IL23A (ENSMMNG00015019758) #13	PAN2 (ENSMMNG00015019731) #14	CNPY2 (ENSMMNG00015019705) #15	CS (ENSMMNG00015019660) #16	COQ10A (ENSMMNG00015019621) #17	ANKRD52 (ENSMMNG00015019573) #18	SLC39A5 (ENSMMNG00015019540) #20	NABP2 (ENSMMNG00015019510) #21	RNF41 (ENSMMNG00015019487) #22	SMARCC2 (ENSMMNG00015019406) #23	MYL6 (ENSMMNG00015019266) ##25	MYL6B (ENSMMNG00015019202) #25	ESYT1 (ENSMMNG00015019100) #26	ZC3H10 (ENSMMNG00015019079) #27	ENSMMNG00015019061	PA2G4 (ENSMMNG00015019022) #29	ERBB3 (ENSMMNG00015018936) #30	ENSMMNG00015018818 ##31	IKZF4 (ENSMMNG00015018768) #32	SUOX (ENSMMNG00015018721) #33	ENSMMNG00015018688 #34	CDK2 (ENSMMNG00015018631) #35	PMEL (ENSMMNG00015018523) #36	DGKA (ENSMMNG00015018428) #37
Sperm whale	MODERN SPECIES	25					APOF (ENSPCTG00005015016) #11	STAT2 (ENSPCTG00005015079) #12	IL23A (ENSPCTG00005015129) #13	PAN2 (ENSPCTG00005015208) #14	CNPY2 (ENSPCTG00005015307) #15	CS (ENSPCTG00005015364) #16	COQ10A (ENSPCTG00005015624) #17	ANKRD52 (ENSPCTG00005015722) #18	ENSPCTG00005015796 #19	SLC39A5 (ENSPCTG00005015816) #20	NABP2 (ENSPCTG00005015943) #21	RNF41 (ENSPCTG00005015987) #22	SMARCC2 (ENSPCTG00005016069) #23	MYL6 (ENSPCTG00005016376) ##25	ESYT1 (ENSPCTG00005016838) #26	ZC3H10 (ENSPCTG00005017148) #27	ENSPCTG00005017159	PA2G4 (ENSPCTG00005017199) #29	ERBB3 (ENSPCTG00005017268) #30
Blue whale	MODERN SPECIES	1	GLS2 (ENSBMSG00010008060) #7	SPRYD4 (ENSBMSG00010008034) #8	MIP (ENSBMSG00010008023) #9	TIMELESS (ENSBMSG00010008010) #10	ENSBMSG00010007993 ##11	APOF (ENSBMSG00010007986) #11	STAT2 (ENSBMSG00010007971) #12	IL23A (ENSBMSG00010007956) #13	PAN2 (ENSBMSG00010007942) #14	CNPY2 (ENSBMSG00010007923) #15	CS (ENSBMSG00010007896) #16	COQ10A (ENSBMSG00010007866) #17	ANKRD52 (ENSBMSG00010007812) #18	SLC39A5 (ENSBMSG00010007776) #20	NABP2 (ENSBMSG00010007758) #21	RNF41 (ENSBMSG00010007744) #22	SMARCC2 (ENSBMSG00010007684) #23	ENSBMSG00010007580 ##25	ESYT1 (ENSBMSG00010007455) #26	ENSBMSG00010007430	PA2G4 (ENSBMSG00010007402) #29	ERBB3 (ENSBMSG00010007283) #30	ENSBMSG00010007212 ##31	IKZF4 (ENSBMSG00010007173) #32	SUOX (ENSBMSG00010007134) #33	RAB5B (ENSBMSG00010007111) #34	CDK2 (ENSBMSG00010007049) #35	PMEL (ENSBMSG00010006950) #36	DGKA (ENSBMSG00010006869) #37	PYM1 (ENSBMSG00010006831)	MMP19 (ENSBMSG00010006791)
Pecora	ANCESTRAL SPECIES	3	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Yarkand deer	MODERN SPECIES	22	SPRYD4 (ENSCHYG00000003172) #8	MIP (ENSCHYG00000003178) #9	TIMELESS (ENSCHYG00000003196) #10	ENSCHYG00000003221 ##11	APOF (ENSCHYG00000003234) #11	STAT2 (ENSCHYG00000003249) #12	IL23A (ENSCHYG00000003289) #13	PAN2 (ENSCHYG00000003311) #14	CNPY2 (ENSCHYG00000003322) #15	CS (ENSCHYG00000003344) #16	COQ10A (ENSCHYG00000003374) #17	ANKRD52 (ENSCHYG00000003415) #18	ENSCHYG00000003551 #19	SLC39A5 (ENSCHYG00000003558) #20	NABP2 (ENSCHYG00000003587) #21	RNF41 (ENSCHYG00000003622) #22	SMARCC2 (ENSCHYG00000003682) #23	MYL6 (ENSCHYG00000003875) ##25	MYL6B (ENSCHYG00000003917) #25	ESYT1 (ENSCHYG00000003948) #26	ZC3H10 (ENSCHYG00000004011) #27	ENSCHYG00000004016	ENSCHYG00000004033 #29	ERBB3 (ENSCHYG00000004075) #30	ENSCHYG00000004114 ##31	IKZF4 (ENSCHYG00000004124) #32	SUOX (ENSCHYG00000004176) #33	ENSCHYG00000004191	RAB5B (ENSCHYG00000004198) #34	ENSCHYG00000004236 #35	PMEL (ENSCHYG00000004318) #36
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Bovidae	ANCESTRAL SPECIES	3	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Bovinae	ANCESTRAL SPECIES	17	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.o #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Bos	ANCESTRAL SPECIES	2	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.o #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Bos_a	ANCESTRAL SPECIES	3	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.o #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Wild yak	MODERN SPECIES	1528	SPRYD4 (ENSBMUG00000018242) #8	MIP (ENSBMUG00000018233) #9	TIMELESS (ENSBMUG00000018192) #10	ENSBMUG00000018152 ##11	APOF (ENSBMUG00000018139) #11	STAT2 (ENSBMUG00000018117) #12	IL23A (ENSBMUG00000018083) #13	PAN2 (ENSBMUG00000017939) #14	CNPY2 (ENSBMUG00000017783) #15	ENSBMUG00000017759 #16	COQ10A (ENSBMUG00000017680) #17	ANKRD52 (ENSBMUG00000017653) #18	ENSBMUG00000017599 #19	SLC39A5 (ENSBMUG00000017582) #20	NABP2 (ENSBMUG00000017512) #21	RNF41 (ENSBMUG00000017491) #22	SMARCC2 (ENSBMUG00000017426) #23	MYL6B (ENSBMUG00000017192) #25	ESYT1 (ENSBMUG00000017081) #26	ZC3H10 (ENSBMUG00000017047) #27	ENSBMUG00000017037	PA2G4 (ENSBMUG00000017023) #29	ERBB3 (ENSBMUG00000016997) #30
Domestic yak	MODERN SPECIES	24	GLS2 (ENSBGRG00000002966) #7	SPRYD4 (ENSBGRG00000002935) #8	MIP (ENSBGRG00000002930) #9	TIMELESS (ENSBGRG00000002908) #10	ENSBGRG00000002887 ##11	APOF (ENSBGRG00000002880) #11	STAT2 (ENSBGRG00000002647) #12	IL23A (ENSBGRG00000002614) #13	PAN2 (ENSBGRG00000002582) #14	CNPY2 (ENSBGRG00000002556) #15	ENSBGRG00000002491 #16	COQ10A (ENSBGRG00000002419) #17	ANKRD52 (ENSBGRG00000002256) #18	SLC39A5 (ENSBGRG00000002136) #20	NABP2 (ENSBGRG00000002100) #21	RNF41 (ENSBGRG00000002082) #22	SMARCC2 (ENSBGRG00000001491) #23	MYL6 (ENSBGRG00000001372) #24	MYL6B (ENSBGRG00000001320) #25	ESYT1 (ENSBGRG00000001229) #26	ZC3H10 (ENSBGRG00000001206) #27	ENSBGRG00000001190	PA2G4 (ENSBGRG00000001097) #29	ERBB3 (ENSBGRG00000000947) #30	RPS26 (ENSBGRG00000000914) #31	IKZF4 (ENSBGRG00000000867) #32	SUOX (ENSBGRG00000000850) #33	RAB5B (ENSBGRG00000000822) #34	CDK2 (ENSBGRG00000000696) #35	PMEL (ENSBGRG00000000563) #36	DGKA (ENSBGRG00000000464) #37
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813.o #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Hybrid Bos Indicus	MODERN SPECIES	24	SPRYD4 (ENSBIXG00005001889) #8	MIP (ENSBIXG00005014332) #9	TIMELESS (ENSBIXG00005005934) #10	ENSBIXG00005014370 ##11	APOF (ENSBIXG00005014379) #11	STAT2 (ENSBIXG00005014399) #12	IL23A (ENSBIXG00005014416) #13	PAN2 (ENSBIXG00005014495) #14	CNPY2 (ENSBIXG00005005638) #15	ENSBIXG00005005706 #16	COQ10A (ENSBIXG00005007275) #17	ANKRD52 (ENSBIXG00005014709) #18	ENSBIXG00005014721 #19	SLC39A5 (ENSBIXG00005006435) #20	NABP2 (ENSBIXG00005014783) #21	RNF41 (ENSBIXG00005014813) #22	SMARCC2 (ENSBIXG00005007014) #23	MYL6 (ENSBIXG00005005709) ##25	MYL6B (ENSBIXG00005015001) #25	ESYT1 (ENSBIXG00005015035) #26	ZC3H10 (ENSBIXG00005015060) #27	ENSBIXG00005015068	PA2G4 (ENSBIXG00005002220) #29	ERBB3 (ENSBIXG00005015138) #30	ENSBIXG00005015184 ##31	IKZF4 (ENSBIXG00005015263) #32	SUOX (ENSBIXG00005002249) #33	RAB5B (ENSBIXG00005006506) #34	CDK2 (ENSBIXG00005015436) #35	PMEL (ENSBIXG00005007548) #36	DGKA (ENSBIXG00005002447) #37
Cow	MODERN SPECIES	24	GLS2 (ENSBTAG00000009284) #7	MIP (ENSBTAG00000010127) #9	TIMELESS (ENSBTAG00000020459) #10	APON (ENSBTAG00000045969) ##11	APOF (ENSBTAG00000004384) #11	STAT2 (ENSBTAG00000004380) #12	IL23A (ENSBTAG00000004378) #13	PAN2 (ENSBTAG00000004376) #14	CNPY2 (ENSBTAG00000004374) #15	CS (ENSBTAG00000004371) #16	COQ10A (ENSBTAG00000004367) #17	ANKRD52 (ENSBTAG00000011762) #18	ENSBTAG00000052361 #19	SLC39A5 (ENSBTAG00000002799) #20	NABP2 (ENSBTAG00000002798) #21	RNF41 (ENSBTAG00000026754) #22	SMARCC2 (ENSBTAG00000014697) #23	MYL6 (ENSBTAG00000010799) ##25	MYL6B (ENSBTAG00000031217) #25	ESYT1 (ENSBTAG00000009543) #26	ZC3H10 (ENSBTAG00000009542) #27	PA2G4 (ENSBTAG00000010451) #29	ERBB3 (ENSBTAG00000010444) #30	RPS26 (ENSBTAG00000038896) ##31	IKZF4 (ENSBTAG00000012636) #32	SUOX (ENSBTAG00000006160) #33	RAB5B (ENSBTAG00000014129) #34	CDK2 (ENSBTAG00000004021) #35	PMEL (ENSBTAG00000004019) #36	DGKA (ENSBTAG00000004018) #37	PYM1 (ENSBTAG00000031146)
American bison	MODERN SPECIES	3043	GLS2 (ENSBBBG00000013300) #7	SPRYD4 (ENSBBBG00000002703) #8	MIP (ENSBBBG00000013310) #9	TIMELESS (ENSBBBG00000001590) #10	ENSBBBG00000013371 ##11	APOF (ENSBBBG00000001582) #11	STAT2 (ENSBBBG00000008286) #12	IL23A (ENSBBBG00000013451) #13	PAN2 (ENSBBBG00000002802) #14	CNPY2 (ENSBBBG00000013563) #15	ENSBBBG00000009053 #16	COQ10A (ENSBBBG00000013622) #17	ANKRD52 (ENSBBBG00000013650) #18	ENSBBBG00000002851 #20	NABP2 (ENSBBBG00000002860) #21	RNF41 (ENSBBBG00000002877) #22	SMARCC2 (ENSBBBG00000013833) #23	MYL6 (ENSBBBG00000013883) ##25	MYL6B (ENSBBBG00000003018) #25	ESYT1 (ENSBBBG00000003044) #26	ZC3H10 (ENSBBBG00000007405) #27	ENSBBBG00000013956	PA2G4 (ENSBBBG00000003066) #29	ERBB3 (ENSBBBG00000014015) #30	ENSBBBG00000014021 ##31	IKZF4 (ENSBBBG00000014059) #32	SUOX (ENSBBBG00000014069) #33	RAB5B (ENSBBBG00000003151) #34	CDK2 (ENSBBBG00000014128) #35	PMEL (ENSBBBG00000014182) #36	DGKA (ENSBBBG00000007491) #37
Caprinae	ANCESTRAL SPECIES		ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517.o #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Rambouillet Sheep	MODERN SPECIES	19	SPRYD4 (ENSOARG00020002567) #8	MIP (ENSOARG00020002585) #9	TIMELESS (ENSOARG00020002605) #10	ENSOARG00020002631 ##11	APOF (ENSOARG00020002637) #11	STAT2 (ENSOARG00020002651) #12	IL23A (ENSOARG00020002694) #13	PAN2 (ENSOARG00020002722) #14	CNPY2 (ENSOARG00020002812) #15	CS (ENSOARG00020002823) #16	COQ10A (ENSOARG00020002854) #17	ANKRD52 (ENSOARG00020002883) #18	ENSOARG00020002922 #19	SLC39A5 (ENSOARG00020002931) #20	NABP2 (ENSOARG00020002944) #21	RNF41 (ENSOARG00020002956) #22	SMARCC2 (ENSOARG00020003097) #23	MYL6 (ENSOARG00020004341) ##25	MYL6B (ENSOARG00020004484) #25	ESYT1 (ENSOARG00020004517) #26	ZC3H10 (ENSOARG00020004565) #27	ENSOARG00020004572	ENSOARG00020004605 #29	ERBB3 (ENSOARG00020004665) #30	IKZF4 (ENSOARG00020004859) #32	SUOX (ENSOARG00020004967) #33	ENSOARG00020004987	RAB5B (ENSOARG00020005005) #34	CDK2 (ENSOARG00020005083) #35	PMEL (ENSOARG00020005208) #36	DGKA (ENSOARG00020005348) #37
Goat	MODERN SPECIES	24	SPRYD4 (ENSCHIG00000021196) #8	MIP (ENSCHIG00000013963) #9	TIMELESS (ENSCHIG00000010689) #10	ENSCHIG00000002500 ##11	APOF (ENSCHIG00000022892) #11	STAT2 (ENSCHIG00000016058) #12	IL23A (ENSCHIG00000010965) #13	PAN2 (ENSCHIG00000026935) #14	CNPY2 (ENSCHIG00000011857) #15	CS (ENSCHIG00000027013) #16	COQ10A (ENSCHIG00000014612) #17	ANKRD52 (ENSCHIG00000014518) #18	ENSCHIG00000021328 #19	SLC39A5 (ENSCHIG00000022298) #20	NABP2 (ENSCHIG00000015362) #21	RNF41 (ENSCHIG00000009196) #22	SMARCC2 (ENSCHIG00000019135) #23	MYL6B (ENSCHIG00000006417) #25	ESYT1 (ENSCHIG00000023216) #26	ZC3H10 (ENSCHIG00000003359) #27	ENSCHIG00000009104 #29	ERBB3 (ENSCHIG00000013969) #30	RPS26 (ENSCHIG00000014348) #31	IKZF4 (ENSCHIG00000015072) #32	SUOX (ENSCHIG00000006773) #33	ENSCHIG00000022774	RAB5B (ENSCHIG00000010333) #34	CDK2 (ENSCHIG00000006945) #35	PMEL (ENSCHIG00000024875) #36	DGKA (ENSCHIG00000013491) #37	PYM1 (ENSCHIG00000026207)
Siberian musk deer	MODERN SPECIES	1241	SPRYD4 (ENSMMSG00000015594) #8	MIP (ENSMMSG00000015573) #9	TIMELESS (ENSMMSG00000015470) #10	ENSMMSG00000015438 ##11	APOF (ENSMMSG00000015426) #11	STAT2 (ENSMMSG00000015363) #12	IL23A (ENSMMSG00000015329) #13	PAN2 (ENSMMSG00000015301) #14	CNPY2 (ENSMMSG00000015263) #15	CS (ENSMMSG00000015185) #16	COQ10A (ENSMMSG00000015112) #17	ANKRD52 (ENSMMSG00000015065) #18	ENSMMSG00000015053 #19	SLC39A5 (ENSMMSG00000015022) #20	NABP2 (ENSMMSG00000014989) #21	RNF41 (ENSMMSG00000014961) #22	SMARCC2 (ENSMMSG00000014846) #23	MYL6 (ENSMMSG00000014706) ##25	ENSMMSG00000014676 #25	ESYT1 (ENSMMSG00000014644) #26	ZC3H10 (ENSMMSG00000014626) #27	ENSMMSG00000014607	PA2G4 (ENSMMSG00000014562) #29	ERBB3 (ENSMMSG00000014410) #30	ENSMMSG00000014368	ENSMMSG00000014353 ##31	IKZF4 (ENSMMSG00000014312) #32	SUOX (ENSMMSG00000014283) #33	RAB5B (ENSMMSG00000014254) #34	ENSMMSG00000014039 #35	PMEL (ENSMMSG00000013868) #36
Camelidae	ANCESTRAL SPECIES	79	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Arabian camel	MODERN SPECIES	3	GLS2 (ENSCDRG00005007217) #7	SPRYD4 (ENSCDRG00005007190) #8	MIP (ENSCDRG00005007133) #9	TIMELESS (ENSCDRG00005006669) #10	ENSCDRG00005006594 ##11	APOF (ENSCDRG00005006565) #11	STAT2 (ENSCDRG00005006459) #12	IL23A (ENSCDRG00005006395) #13	PAN2 (ENSCDRG00005006321) #14	CNPY2 (ENSCDRG00005006281) #15	CS (ENSCDRG00005006204) #16	COQ10A (ENSCDRG00005006113) #17	ANKRD52 (ENSCDRG00005006085) #18	SLC39A5 (ENSCDRG00005006036) #20	NABP2 (ENSCDRG00005006006) #21	RNF41 (ENSCDRG00005005957) #22	SMARCC2 (ENSCDRG00005005840) #23	MYL6 (ENSCDRG00005005699) ##25	MYL6B (ENSCDRG00005005633) #25	ENSCDRG00005005619	ESYT1 (ENSCDRG00005005575) #26	ZC3H10 (ENSCDRG00005005557) #27	ENSCDRG00005005546	ENSCDRG00005005523 #29	ERBB3 (ENSCDRG00005005154) #30	RPS26 (ENSCDRG00005005104) #31	IKZF4 (ENSCDRG00005005019) #32	SUOX (ENSCDRG00005004981) #33	RAB5B (ENSCDRG00005004947) #34	CDK2 (ENSCDRG00005004824) #35	PMEL (ENSCDRG00005004512) #36
Alpaca	MODERN SPECIES	553									ENSVPAG00000007311 #12	IL23A (ENSVPAG00000007310) #13	PAN2 (ENSVPAG00000007309) #14	ENSVPAG00000007308	CS (ENSVPAG00000007307) #16	COQ10A (ENSVPAG00000007306) #17	ENSVPAG00000007304 #20	RNF41 (ENSVPAG00000007303) #22	ENSVPAG00000007302 #23	MYL6 (ENSVPAG00000007301) ##25
Laurasiatheria_b	ANCESTRAL SPECIES	6	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34
Carnivora	ANCESTRAL SPECIES	3	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Caniformia	ANCESTRAL SPECIES	20	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Caniformia_b	ANCESTRAL SPECIES	18	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Ursidae	ANCESTRAL SPECIES	13	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.m #35	ENSGT00950000183188.A.a.f #36	ENSGT00940000157144 #37
Ursus	ANCESTRAL SPECIES	23	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746.nd #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517.m #35	ENSGT00950000183188.A.a.f #36	ENSGT00940000157144 #37
American black bear	MODERN SPECIES	7175																RNF41 (ENSUAMG00000004623) #22	ENSUAMG00000001891 #23
Polar bear	MODERN SPECIES	113	RBMS2 (ENSUMAG00000017426)	GLS2 (ENSUMAG00000017313) #7	SPRYD4 (ENSUMAG00000017278) #8	MIP (ENSUMAG00000017267) #9	TIMELESS (ENSUMAG00000017082) #10	APOF (ENSUMAG00000017052) #11	STAT2 (ENSUMAG00000017043) #12	IL23A (ENSUMAG00000017034) #13	PAN2 (ENSUMAG00000017020) #14	CNPY2 (ENSUMAG00000017016) #15	CS (ENSUMAG00000016853) #16	COQ10A (ENSUMAG00000016840) #17	ENSUMAG00000016831 #18	SLC39A5 (ENSUMAG00000016818) #20	NABP2 (ENSUMAG00000016815) #21	RNF41 (ENSUMAG00000016812) #22	SMARCC2 (ENSUMAG00000016793) #23	MYL6 (ENSUMAG00000016789) ##25	ESYT1 (ENSUMAG00000016782) #26	ZC3H10 (ENSUMAG00000016780) #27	PA2G4 (ENSUMAG00000016773) #29	ERBB3 (ENSUMAG00000016351) #30	ENSUMAG00000016279 ##31	IKZF4 (ENSUMAG00000016268) #32	SUOX (ENSUMAG00000016264) #33	RAB5B (ENSUMAG00000016263) #34	ENSUMAG00000016257 #35	PMEL (ENSUMAG00000016253) #36	DGKA (ENSUMAG00000016243) #37	PYM1 (ENSUMAG00000016241)	MMP19 (ENSUMAG00000016229)
Giant Panda	MODERN SPECIES	6	RBMS2 (ENSAMEG00000004054)	GLS2 (ENSAMEG00000004014) #7	SPRYD4 (ENSAMEG00000004011) #8	MIP (ENSAMEG00000003992) #9	TIMELESS (ENSAMEG00000003946) #10	ENSAMEG00000003941 #11	STAT2 (ENSAMEG00000003886) #12	IL23A (ENSAMEG00000026605) #13	PAN2 (ENSAMEG00000003824) #14	CNPY2 (ENSAMEG00000003822) #15	CS (ENSAMEG00000003774) #16	COQ10A (ENSAMEG00000003762) #17	ANKRD52 (ENSAMEG00000003658) #18	SLC39A5 (ENSAMEG00000003645) #20	NABP2 (ENSAMEG00000003630) #21	RNF41 (ENSAMEG00000003610) #22	SMARCC2 (ENSAMEG00000003536) #23	ENSAMEG00000012586 ##25	MYL6B (ENSAMEG00000003509) #25	ESYT1 (ENSAMEG00000003434) #26	ZC3H10 (ENSAMEG00000019365) #27	ENSAMEG00000031225	PA2G4 (ENSAMEG00000003380) #29	ERBB3 (ENSAMEG00000003273) #30	ENSAMEG00000025903	RPS26 (ENSAMEG00000003260) ##31	IKZF4 (ENSAMEG00000003228) #32	SUOX (ENSAMEG00000003226) #33	RAB5B (ENSAMEG00000003196) #34	ENSAMEG00000003168 #35	PMEL (ENSAMEG00000003145) #36
Mustelinae	ANCESTRAL SPECIES	61	ENSGT00940000155250.g	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
American mink	MODERN SPECIES	76	RBMS2 (ENSNVIG00000000449)	GLS2 (ENSNVIG00000000366) #7	SPRYD4 (ENSNVIG00000000358) #8	MIP (ENSNVIG00000000352) #9	TIMELESS (ENSNVIG00000000326) #10	APOF (ENSNVIG00000000322) #11	STAT2 (ENSNVIG00000000267) #12	IL23A (ENSNVIG00000000258) #13	PAN2 (ENSNVIG00000000092) #14	CNPY2 (ENSNVIG00000000067) #15	CISY (ENSNVIG00000022593) #16	COQ10A (ENSNVIG00000022571) #17	ANKRD52 (ENSNVIG00000022558) #18	SLC39A5 (ENSNVIG00000022541) #20	NABP2 (ENSNVIG00000022526) #21	RNF41 (ENSNVIG00000022515) #22	SMARCC2 (ENSNVIG00000022466) #23	MYL6 (ENSNVIG00000022413) ##25	MYL6B (ENSNVIG00000022394) #25	ESYT1 (ENSNVIG00000022370) #26	ZC3H10 (ENSNVIG00000022364) #27	ENSNVIG00000022361	ENSNVIG00000022300 #29	ERBB3 (ENSNVIG00000022259) #30	ENSNVIG00000022251	ENSNVIG00000022250	ENSNVIG00000022221 ##31	IKZF4 (ENSNVIG00000022197) #32	SUOX (ENSNVIG00000022186) #33	RAB5B (ENSNVIG00000022167) #34	CDK2 (ENSNVIG00000022106) #35
Ferret	MODERN SPECIES	340	ENSMPUG00000001490	SPRYD4 (ENSMPUG00000001489) #8	GLS2 (ENSMPUG00000001477) #7	MIP (ENSMPUG00000001456) #9	ENSMPUG00000001445	APOF (ENSMPUG00000001442) #11	STAT2 (ENSMPUG00000001431) #12	IL23A (ENSMPUG00000001394) #13	PAN2 (ENSMPUG00000001383) #14	CNPY2 (ENSMPUG00000001366) #15	CS (ENSMPUG00000001323) #16	COQ10A (ENSMPUG00000001321) #17	ANKRD52 (ENSMPUG00000001316) #18	SLC39A5 (ENSMPUG00000001307) #20	ENSMPUG00000001297 #21	RNF41 (ENSMPUG00000001296) #22	SMARCC2 (ENSMPUG00000001291) #23	MYL6B (ENSMPUG00000001286) #25	ESYT1 (ENSMPUG00000001281) #26	ZC3H10 (ENSMPUG00000018496) #27	ENSMPUG00000001240 #29	ERBB3 (ENSMPUG00000000991) #30	IKZF4 (ENSMPUG00000000964) #32	SUOX (ENSMPUG00000000961) #33	RAB5B (ENSMPUG00000000946) #34	CDK2 (ENSMPUG00000000944) #35	PMEL (ENSMPUG00000000940) #36	DGKA (ENSMPUG00000000935) #37	PYM1 (ENSMPUG00000000931)	MMP19 (ENSMPUG00000000928)	ENSMPUG00000000925
Canidae	ANCESTRAL SPECIES	44	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT01050000245459	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00910000147679	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Canis_lupus	ANCESTRAL SPECIES	40	ENSGT00940000159780 #8	ENSGT00940000164082	ENSGT00940000156260 #9	ENSGT01050000245459	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00910000147519 #19	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Dingo	MODERN SPECIES	374	GLS2 (ENSCAFG00020024477) #7	SPRYD4 (ENSCAFG00020024734) #8	ENSCAFG00020024736	MIP (ENSCAFG00020024739) #9	ENSCAFG00020024754	STAT2 (ENSCAFG00020024840) #12	IL23A (ENSCAFG00020024855) #13	PAN2 (ENSCAFG00020024865) #14	CNPY2 (ENSCAFG00020024900) #15	CS (ENSCAFG00020024902) #16	COQ10A (ENSCAFG00020024907) #17	ANKRD52 (ENSCAFG00020024912) #18	ENSCAFG00020024918 #19	SLC39A5 (ENSCAFG00020024919) #20	NABP2 (ENSCAFG00020024920) #21	RNF41 (ENSCAFG00020024923) #22	SMARCC2 (ENSCAFG00020025023) #23	ENSCAFG00020025744 #24	MYL6B (ENSCAFG00020025772) #25	ESYT1 (ENSCAFG00020025839) #26	ZC3H10 (ENSCAFG00020025996) #27	PA2G4 (ENSCAFG00020026003) #29	ERBB3 (ENSCAFG00020026023) #30	ENSCAFG00020026088 ##31	IKZF4 (ENSCAFG00020026090) #32	SUOX (ENSCAFG00020026092) #33	RAB5B (ENSCAFG00020026094) #34	CDK2 (ENSCAFG00020026095) #35	ENSCAFG00020026096 #36	DGKA (ENSCAFG00020026097) #37	PYM1 (ENSCAFG00020026099)
Dog	MODERN SPECIES	1	GLS2 (ENSCAFG00845008418) #7	SPRYD4 (ENSCAFG00845008355) #8	ENSCAFG00845008341	MIP (ENSCAFG00845008298) #9	TIMELESS (ENSCAFG00845008229)	APOF (ENSCAFG00845008198) #11	STAT2 (ENSCAFG00845008098) #12	IL23A (ENSCAFG00845008036) #13	PAN2 (ENSCAFG00845007965) #14	CNPY2 (ENSCAFG00845007911) #15	CS (ENSCAFG00845007644) #16	COQ10A (ENSCAFG00845007484) #17	ANKRD52 (ENSCAFG00845007315) #18	SLC39A5 (ENSCAFG00845007132) #20	NABP2 (ENSCAFG00845007045) #21	RNF41 (ENSCAFG00845006959) #22	SMARCC2 (ENSCAFG00845006751) #23	MYL6 (ENSCAFG00845006499) #25	ESYT1 (ENSCAFG00845006382) #26	ZC3H10 (ENSCAFG00845006353) #27	ENSCAFG00845006331	PA2G4 (ENSCAFG00845006301) #29	ERBB3 (ENSCAFG00845006158) #30	RPS26 (ENSCAFG00845006083) ##31	IKZF4 (ENSCAFG00845006038) #32	SUOX (ENSCAFG00845006001) #33	RAB5B (ENSCAFG00845005969) #34	CDK2 (ENSCAFG00845005902) #35	PMEL (ENSCAFG00845005780) #36	DGKA (ENSCAFG00845005690) #37	PYM1 (ENSCAFG00845005627)
Red fox	MODERN SPECIES	38	RBMS2 (ENSVVUG00000021554)	GLS2 (ENSVVUG00000021555) #7	SPRYD4 (ENSVVUG00000021557) #8	ENSVVUG00000021558	MIP (ENSVVUG00000021559) #9	TIMELESS (ENSVVUG00000021563) #10	STAT2 (ENSVVUG00000021580) #12	IL23A (ENSVVUG00000021877) #13	PAN2 (ENSVVUG00000021878) #14	CNPY2 (ENSVVUG00000021880) #15	CS (ENSVVUG00000021881) #16	COQ10A (ENSVVUG00000021958) #17	ANKRD52 (ENSVVUG00000021960) #18	SLC39A5 (ENSVVUG00000021961) #20	NABP2 (ENSVVUG00000021962) #21	RNF41 (ENSVVUG00000021963) #22	SMARCC2 (ENSVVUG00000021964) #23	ENSVVUG00000021976 #24	MYL6B (ENSVVUG00000021989) #25	ESYT1 (ENSVVUG00000021991) #26	ZC3H10 (ENSVVUG00000021999) #27	PA2G4 (ENSVVUG00000022000) #29	ERBB3 (ENSVVUG00000022004) #30	ENSVVUG00000022013 ##31	IKZF4 (ENSVVUG00000022020) #32	SUOX (ENSVVUG00000022043) #33	ENSVVUG00000022046	RAB5B (ENSVVUG00000022054) #34	CDK2 (ENSVVUG00000022126) #35	PMEL (ENSVVUG00000022168) #36	DGKA (ENSVVUG00000022182) #37
Felidae	ANCESTRAL SPECIES	2	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Panthera	ANCESTRAL SPECIES		ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT01050000245459	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Tiger	MODERN SPECIES	160	RBMS2 (ENSPTIG00000017925)	GLS2 (ENSPTIG00000017548) #7	SPRYD4 (ENSPTIG00000017452) #8	MIP (ENSPTIG00000017418) #9	ENSPTIG00000016933	ENSPTIG00000006370	STAT2 (ENSPTIG00000015130) #12	IL23A (ENSPTIG00000015077) #13	PAN2 (ENSPTIG00000012494) #14	CNPY2 (ENSPTIG00000012376) #15	CS (ENSPTIG00000012285) #16	COQ10A (ENSPTIG00000012041) #17	ENSPTIG00000006325 #19	SLC39A5 (ENSPTIG00000011295) #20	NABP2 (ENSPTIG00000011222) #21	RNF41 (ENSPTIG00000010920) #22	SMARCC2 (ENSPTIG00000009222) #23	MYL6 (ENSPTIG00000007516) ##25	MYL6B (ENSPTIG00000006978) #25	ESYT1 (ENSPTIG00000006039) #26	ZC3H10 (ENSPTIG00000006237) #27	ENSPTIG00000005443	PA2G4 (ENSPTIG00000003864) #29	ERBB3 (ENSPTIG00000000947) #30	RPS26 (ENSPTIG00000000174) #31	IKZF4 (ENSPTIG00000019541) #32	SUOX (ENSPTIG00000019173) #33	RAB5B (ENSPTIG00000018924) #34	CDK2 (ENSPTIG00000018583) #35	PMEL (ENSPTIG00000017816) #36	DGKA (ENSPTIG00000017513) #37
Panthera_a	ANCESTRAL SPECIES	12	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT01050000245459	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
lion	MODERN SPECIES	7	GLS2 (ENSPLOG00000010015) #7	SPRYD4 (ENSPLOG00000009958) #8	MIP (ENSPLOG00000009925) #9	TIMELESS (ENSPLOG00000009704) #10	ENSPLOG00000009664	APOF (ENSPLOG00000009651) #11	STAT2 (ENSPLOG00000009589) #12	IL23A (ENSPLOG00000009557) #13	PAN2 (ENSPLOG00000009514) #14	CNPY2 (ENSPLOG00000009487) #15	CS (ENSPLOG00000009410) #16	COQ10A (ENSPLOG00000009301) #17	ANKRD52 (ENSPLOG00000009196) #18	SLC39A5 (ENSPLOG00000009118) #20	NABP2 (ENSPLOG00000009074) #21	RNF41 (ENSPLOG00000009031) #22	SMARCC2 (ENSPLOG00000008853) #23	MYL6 (ENSPLOG00000008621) ##25	ESYT1 (ENSPLOG00000008526) #26	ZC3H10 (ENSPLOG00000008508) #27	ENSPLOG00000008477	PA2G4 (ENSPLOG00000008430) #29	ERBB3 (ENSPLOG00000008060) #30	ENSPLOG00000007977 ##31	IKZF4 (ENSPLOG00000007891) #32	SUOX (ENSPLOG00000007852) #33	RAB5B (ENSPLOG00000007787) #34	CDK2 (ENSPLOG00000007643) #35	PMEL (ENSPLOG00000007463) #36	DGKA (ENSPLOG00000007363) #37	PYM1 (ENSPLOG00000007314)
leopard	MODERN SPECIES	27	BAZ2A (ENSPPRG00000006678)	RBMS2 (ENSPPRG00000007678)	GLS2 (ENSPPRG00000008872) #7	SPRYD4 (ENSPPRG00000009022) #8	MIP (ENSPPRG00000009463) #9	ENSPPRG00000011001	STAT2 (ENSPPRG00000017893) #12	IL23A (ENSPPRG00000018623) #13	PAN2 (ENSPPRG00000021586) #14	CNPY2 (ENSPPRG00000022430) #15	CS (ENSPPRG00000024058) #16	COQ10A (ENSPPRG00000023240) #17	ANKRD52 (ENSPPRG00000022768) #18	SLC39A5 (ENSPPRG00000000308) #20	NABP2 (ENSPPRG00000001294) #21	RNF41 (ENSPPRG00000001888) #22	SMARCC2 (ENSPPRG00000008361) #23	MYL6 (ENSPPRG00000011178) ##25	MYL6B (ENSPPRG00000013141) #25	ENSPPRG00000013679	ESYT1 (ENSPPRG00000019808) #26	ENSPPRG00000020742	PA2G4 (ENSPPRG00000023308) #29	ERBB3 (ENSPPRG00000002346) #30	RPS26 (ENSPPRG00000002646) #31	IKZF4 (ENSPPRG00000003252) #32	SUOX (ENSPPRG00000004515) #33	RAB5B (ENSPPRG00000005396) #34	CDK2 (ENSPPRG00000007168) #35	PMEL (ENSPPRG00000011692) #36	DGKA (ENSPPRG00000012830) #37
Cat	MODERN SPECIES	238	RBMS2 (ENSFCAG00000012028)	GLS2 (ENSFCAG00000012027) #7	SPRYD4 (ENSFCAG00000023005) #8	MIP (ENSFCAG00000012025) #9	TIMELESS (ENSFCAG00000012024) #10	APOF (ENSFCAG00000028837) #11	STAT2 (ENSFCAG00000012023) #12	IL23A (ENSFCAG00000012022) #13	PAN2 (ENSFCAG00000012021) #14	CNPY2 (ENSFCAG00000012020) #15	CS (ENSFCAG00000012019) #16	COQ10A (ENSFCAG00000012018) #17	ANKRD52 (ENSFCAG00000012017) #18	SLC39A5 (ENSFCAG00000012016) #20	NABP2 (ENSFCAG00000012015) #21	RNF41 (ENSFCAG00000040993) #22	SMARCC2 (ENSFCAG00000014866) #23	MYL6 (ENSFCAG00000014865) ##25	MYL6B (ENSFCAG00000014863) #25	ESYT1 (ENSFCAG00000014861) #26	ZC3H10 (ENSFCAG00000049629) #27	RPL41 (ENSFCAG00000041907)	PA2G4 (ENSFCAG00000014860) #29	ERBB3 (ENSFCAG00000014859) #30	ENSFCAG00000013977 ##31	IKZF4 (ENSFCAG00000029852) #32	SUOX (ENSFCAG00000026290) #33	RAB5B (ENSFCAG00000013974) #34	CDK2 (ENSFCAG00000013973) #35	PMEL (ENSFCAG00000013970) #36	DGKA (ENSFCAG00000013969) #37
Laurasiatheria_c	ANCESTRAL SPECIES	5	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Equus	ANCESTRAL SPECIES	43	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Horse	MODERN SPECIES	27	BAZ2A (ENSECAG00000018243)	RBMS2 (ENSECAG00000013470)	GLS2 (ENSECAG00000008933) #7	SPRYD4 (ENSECAG00000008889) #8	MIP (ENSECAG00000008856) #9	TIMELESS (ENSECAG00000002892) #10	STAT2 (ENSECAG00000022326) #12	IL23A (ENSECAG00000022310) #13	PAN2 (ENSECAG00000019814) #14	CNPY2 (ENSECAG00000019676)	CS (ENSECAG00000016568) #16	COQ10A (ENSECAG00000015874) #17	ANKRD52 (ENSECAG00000009511) #18	SLC39A5 (ENSECAG00000008841) #20	NABP2 (ENSECAG00000008042) #21	RNF41 (ENSECAG00000006364) #22	SMARCC2 (ENSECAG00000020679) #23	MYL6 (ENSECAG00000039438) #24	ESYT1 (ENSECAG00000013110) #26	ZC3H10 (ENSECAG00000013003) #27	ENSECAG00000041882	PA2G4 (ENSECAG00000005731) #29	ERBB3 (ENSECAG00000024374) #30	RPS26 (ENSECAG00000024268) ##31	ENSECAG00000046148	IKZF4 (ENSECAG00000024175) #32	SUOX (ENSECAG00000023522) #33	RAB5B (ENSECAG00000023306) #34	CDK2 (ENSECAG00000021177) #35	PMEL (ENSECAG00000020000) #36	DGKA (ENSECAG00000011968) #37
Donkey	MODERN SPECIES	14	ENSEASG00005006215	GLS2 (ENSEASG00005005782) #7	SPRYD4 (ENSEASG00005037318) #8	MIP (ENSEASG00005005765) #9	TIMELESS (ENSEASG00005005617) #10	APOF (ENSEASG00005026252) #11	STAT2 (ENSEASG00005005423) #12	IL23A (ENSEASG00005035882) #13	PAN2 (ENSEASG00005005235) #14	CNPY2 (ENSEASG00005005179) #15	CS (ENSEASG00005005030) #16	COQ10A (ENSEASG00005005003) #17	ANKRD52 (ENSEASG00005004936) #18	SLC39A5 (ENSEASG00005004911) #20	NABP2 (ENSEASG00005004905) #21	RNF41 (ENSEASG00005004896) #22	SMARCC2 (ENSEASG00005004507) #23	MYL6 (ENSEASG00005031471) #24	MYL6B (ENSEASG00005004278) #25	ESYT1 (ENSEASG00005003701) #26	ZC3H10 (ENSEASG00005036350) #27	PA2G4 (ENSEASG00005002978) #29	ERBB3 (ENSEASG00005002897) #30	ENSEASG00005035372	ENSEASG00005002890 ##31	IKZF4 (ENSEASG00005002885) #32	SUOX (ENSEASG00005002882) #33	RAB5B (ENSEASG00005002862) #34	CDK2 (ENSEASG00005002820) #35	PMEL (ENSEASG00005002739) #36	DGKA (ENSEASG00005002337) #37
Chiroptera	DUPLICATION
Chiroptera	ANCESTRAL SPECIES																	ENSGT00530000063647.B.o #22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT00530000063647.B.o #22
Microbat	MODERN SPECIES	1036	PPM1D (ENSMLUG00000000476)	ENSMLUG00000026663	BCAS3 (ENSMLUG00000011632)	TBX2 (ENSMLUG00000011673)	TBX4 (ENSMLUG00000011682)	BRIP1 (ENSMLUG00000003866)	INTS2 (ENSMLUG00000003877)	MED13 (ENSMLUG00000003891)	ENSMLUG00000003676	RPS6KB1 (ENSMLUG00000003666)	TUBD1 (ENSMLUG00000003662)	VMP1 (ENSMLUG00000003657)	PTRH2 (ENSMLUG00000025120)	CLTC (ENSMLUG00000003649)	DHX40 (ENSMLUG00000003644)	ENSMLUG00000024642 #22	YPEL2 (ENSMLUG00000029934)	GDPD1 (ENSMLUG00000002268)	GOSR2 (ENSMLUG00000002709)	WNT9B (ENSMLUG00000002716)	WNT3 (ENSMLUG00000030546)	ENSMLUG00000014735	ENSMLUG00000027897	CRHR1 (ENSMLUG00000011249)	MAPT (ENSMLUG00000004926)	KANSL1 (ENSMLUG00000004937)	CDC27 (ENSMLUG00000001205)	MYL4 (ENSMLUG00000027789) ##25	ITGB3 (ENSMLUG00000030451)	ENSMLUG00000010984	ENSMLUG00000011972
Chiroptera	ANCESTRAL SPECIES	4	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.p #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Microchiroptera	ANCESTRAL SPECIES	2	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.p #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Greater horseshoe bat	MODERN SPECIES	1	RBMS2 (ENSRFEG00010009809)	GLS2 (ENSRFEG00010009734) #7	SPRYD4 (ENSRFEG00010009705) #8	ENSRFEG00010009680	MIP (ENSRFEG00010009638) #9	TIMELESS (ENSRFEG00010009600) #10	APOF (ENSRFEG00010009558) #11	STAT2 (ENSRFEG00010009437) #12	IL23A (ENSRFEG00010009379) #13	PAN2 (ENSRFEG00010009344) #14	CS (ENSRFEG00010009145) #16	COQ10A (ENSRFEG00010009001) #17	ANKRD52 (ENSRFEG00010008957) #18	SLC39A5 (ENSRFEG00010008909) #20	NABP2 (ENSRFEG00010008863) #21	RNF41 (ENSRFEG00010008805) #22	SMARCC2 (ENSRFEG00010008662) #23	MYL6 (ENSRFEG00010008401) ##25	MYL6B (ENSRFEG00010008336) #25	ESYT1 (ENSRFEG00010008273) #26	ZC3H10 (ENSRFEG00010008259) #27	ENSRFEG00010008225	ENSRFEG00010008193	ENSRFEG00010008154 #29	ERBB3 (ENSRFEG00010008021) #30	RPS26 (ENSRFEG00010007975) #31	IKZF4 (ENSRFEG00010007797) #32	SUOX (ENSRFEG00010007748) #33	RAB5B (ENSRFEG00010007708) #34	CDK2 (ENSRFEG00010007558) #35	PMEL (ENSRFEG00010007423) #36
Microbat	MODERN SPECIES	1056	SPRYD4 (ENSMLUG00000006850) #8	ENSMLUG00000008153	MIP (ENSMLUG00000006844) #9	TIMELESS (ENSMLUG00000006822) #10	APOF (ENSMLUG00000006814) #11	STAT2 (ENSMLUG00000006785) #12	IL23A (ENSMLUG00000006778) #13	ENSMLUG00000029293	PAN2 (ENSMLUG00000006737) #14	CNPY2 (ENSMLUG00000006725) #15	CS (ENSMLUG00000006712) #16	COQ10A (ENSMLUG00000006706) #17	ANKRD52 (ENSMLUG00000006674) #18	SLC39A5 (ENSMLUG00000006654) #20	NABP2 (ENSMLUG00000006646) #21	RNF41 (ENSMLUG00000006057) #22	ENSMLUG00000022653	SMARCC2 (ENSMLUG00000006625) #23	MYL6 (ENSMLUG00000006614) ##25	MYL6B (ENSMLUG00000006591) #25	ESYT1 (ENSMLUG00000006568) #26	ZC3H10 (ENSMLUG00000006564) #27	ENSMLUG00000000815 #29	ERBB3 (ENSMLUG00000000801) #30	ENSMLUG00000029968 ##31	IKZF4 (ENSMLUG00000026014) #32	SUOX (ENSMLUG00000003606) #33	RAB5B (ENSMLUG00000003602) #34	CDK2 (ENSMLUG00000004713) #35	PMEL (ENSMLUG00000003597) #36	DGKA (ENSMLUG00000003590) #37
Megabat	MODERN SPECIES	2828	RBMS2 (ENSPVAG00000007616)	GLS2 (ENSPVAG00000007615) #7	SPRYD4 (ENSPVAG00000007613) #8	MIP (ENSPVAG00000007611) #9	TIMELESS (ENSPVAG00000007604) #10	APOF (ENSPVAG00000007603) #11	STAT2 (ENSPVAG00000007596) #12	IL23A (ENSPVAG00000007595) #13	PAN2 (ENSPVAG00000007591) #14	CNPY2 (ENSPVAG00000007589) #15	CS (ENSPVAG00000007587) #16	COQ10A (ENSPVAG00000007585) #17	ANKRD52 (ENSPVAG00000007582) #18	SLC39A5 (ENSPVAG00000007580) #20	NABP2 (ENSPVAG00000007578) #21	RNF41 (ENSPVAG00000007577) #22	SMARCC2 (ENSPVAG00000007574) #23	MYL6 (ENSPVAG00000007572) ##25	MYL6B (ENSPVAG00000007571) #25	ESYT1 (ENSPVAG00000007567) #26	ZC3H10 (ENSPVAG00000007566) #27	PA2G4 (ENSPVAG00000007563) #29	ERBB3 (ENSPVAG00000007560) #30	ENSPVAG00000007559 ##31	IKZF4 (ENSPVAG00000007558) #32	SUOX (ENSPVAG00000007557) #33	RAB5B (ENSPVAG00000007556) #34	CDK2 (ENSPVAG00000007555) #35	PMEL (ENSPVAG00000007554) #36
Eulipotyphla	DUPLICATION
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063647.B.q #22
Hedgehog	MODERN SPECIES	13456																ENSEEUG00000013859 #22
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063647.B.r #22
Hedgehog	MODERN SPECIES	7395																RNF41 (ENSEEUG00000009638) #22
Common shrew	MODERN SPECIES	5796																RNF41 (ENSSARG00000005781) #22
Atlantogenata	ANCESTRAL SPECIES	16	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Afrotheria	ANCESTRAL SPECIES	8	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.a #24	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Afrotheria_a	ANCESTRAL SPECIES	8	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.g #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Elephant	MODERN SPECIES	196	RBMS2 (ENSLAFG00000008251)	GLS2 (ENSLAFG00000002237) #7	SPRYD4 (ENSLAFG00000002235) #8	MIP (ENSLAFG00000032685) #9	TIMELESS (ENSLAFG00000004742) #10	ENSLAFG00000026784 #11	STAT2 (ENSLAFG00000014890) #12	IL23A (ENSLAFG00000014886) #13	PAN2 (ENSLAFG00000014873) #14	CNPY2 (ENSLAFG00000014867) #15	CS (ENSLAFG00000014860) #16	COQ10A (ENSLAFG00000014858) #17	ANKRD52 (ENSLAFG00000014852) #18	SLC39A5 (ENSLAFG00000000195) #20	NABP2 (ENSLAFG00000000193) #21	RNF41 (ENSLAFG00000014848) #22	SMARCC2 (ENSLAFG00000014832) #23	MYL6B (ENSLAFG00000012658) #25	ESYT1 (ENSLAFG00000014820) #26	ZC3H10 (ENSLAFG00000014817) #27	PA2G4 (ENSLAFG00000029825) #29	ERBB3 (ENSLAFG00000014798) #30	ENSLAFG00000013329 ##31	IKZF4 (ENSLAFG00000026742) #32	SUOX (ENSLAFG00000008237) #33	RAB5B (ENSLAFG00000018009) #34	CDK2 (ENSLAFG00000016537) #35	PMEL (ENSLAFG00000014591) #36	DGKA (ENSLAFG00000017993) #37	PYM1 (ENSLAFG00000002369)	MMP19 (ENSLAFG00000017807)
Hyrax	MODERN SPECIES	4467																RNF41 (ENSPCAG00000006212) #22	SMARCC2 (ENSPCAG00000006025) #23	MYL6 (ENSPCAG00000005980) ##25	MYL6B (ENSPCAG00000005927) #25	ESYT1 (ENSPCAG00000005663) #26	ZC3H10 (ENSPCAG00000005636) #27	PA2G4 (ENSPCAG00000005509) #29	ERBB3 (ENSPCAG00000005292) #30
Tenrec	MODERN SPECIES	3602																RNF41 (ENSETEG00000017052) #22	SMARCC2 (ENSETEG00000017043) #23	MYL6 (ENSETEG00000017041) #24	ESYT1 (ENSETEG00000017032) #26
Xenarthra	ANCESTRAL SPECIES	12	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00390000010463.a.a.a #7	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.h ##11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000161158 #15	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.a.b.a ##25	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a.c.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Sloth	MODERN SPECIES	12445																RNF41 (ENSCHOG00000003263) #22
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	3693	ENSDNOG00000045837	ENSDNOG00000041306	ENSDNOG00000046516	ENSDNOG00000035940	DTWD2 (ENSDNOG00000041906)	DMXL1 (ENSDNOG00000009981)	TNFAIP8 (ENSDNOG00000019681)	ENSDNOG00000042795	HSD17B4 (ENSDNOG00000019682)	FAM170A (ENSDNOG00000010004)	ENSDNOG00000037586	PRR16 (ENSDNOG00000048604)	ENSDNOG00000031505	FTMT (ENSDNOG00000047195)	SRFBP1 (ENSDNOG00000017733)	ENSDNOG00000034491 #22	LOX (ENSDNOG00000031089)	ENSDNOG00000009013	SNCAIP (ENSDNOG00000002675)	ENSDNOG00000049002	ENSDNOG00000012846
Armadillo	MODERN SPECIES	2301	RBMS2 (ENSDNOG00000011198)	ENSDNOG00000011157 #8	GLS2 (ENSDNOG00000011167) #7	MIP (ENSDNOG00000030726) #9	TIMELESS (ENSDNOG00000011047) #10	ENSDNOG00000037282 ##11	STAT2 (ENSDNOG00000011002) #12	IL23A (ENSDNOG00000034705) #13	PAN2 (ENSDNOG00000010940) #14	CNPY2 (ENSDNOG00000010925) #15	ENSDNOG00000010907 #16	COQ10A (ENSDNOG00000038641) #17	ANKRD52 (ENSDNOG00000031016) #18	SLC39A5 (ENSDNOG00000046490) #20	NABP2 (ENSDNOG00000013517) #21	RNF41 (ENSDNOG00000006013) #22	SMARCC2 (ENSDNOG00000004036) #23	MYL6 (ENSDNOG00000042053) ##25	MYL6B (ENSDNOG00000007592) #25	ESYT1 (ENSDNOG00000000337) #26	ZC3H10 (ENSDNOG00000040571) #27	PA2G4 (ENSDNOG00000001015) #29	ERBB3 (ENSDNOG00000001011) #30	RPS26 (ENSDNOG00000049367) #31	IKZF4 (ENSDNOG00000037824) #32	SUOX (ENSDNOG00000016955) #33	RAB5B (ENSDNOG00000016952) #34	CDK2 (ENSDNOG00000043354) #35	PMEL (ENSDNOG00000016948) #36	DGKA (ENSDNOG00000016947) #37	PYM1 (ENSDNOG00000048414)
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	11	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.m #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00950000185738	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Marsupialia_b	ANCESTRAL SPECIES	13	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.m #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107.h #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Diprotodontia	ANCESTRAL SPECIES	8	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B.m #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107.h #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Diprotodontia_a	ANCESTRAL SPECIES	8	ENSGT00940000174110	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000006482 #13	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079.k #21	ENSGT00530000063647.B.m #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b.b ##25	ENSGT01030000234570.d.b.a.a.a.a #25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107.h #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Common wonbat	MODERN SPECIES	682	ENSVURG00010023651	GLS2 (ENSVURG00010023652) #7	SPRYD4 (ENSVURG00010023655) #8	MIP (ENSVURG00010023657) #9	TIMELESS (ENSVURG00010023659) #10	ENSVURG00010023661 #11	STAT2 (ENSVURG00010023662) #12	IL23A (ENSVURG00010023664) #13	PAN2 (ENSVURG00010023667) #14	ENSVURG00010023683	CS (ENSVURG00010023685) #16	COQ10A (ENSVURG00010023686) #17	ANKRD52 (ENSVURG00010023687) #18	SLC39A5 (ENSVURG00010023688) #20	ENSVURG00010023689 #21	ENSVURG00010023690 #22	SMARCC2 (ENSVURG00010023692) #23	ENSVURG00010023693 ##25	MYL6B (ENSVURG00010023694) #25	ESYT1 (ENSVURG00010023696) #26	ZC3H10 (ENSVURG00010023704) #27	ENSVURG00010023706	PA2G4 (ENSVURG00010023709) #29	ERBB3 (ENSVURG00010023714) #30	ENSVURG00010023721 ##31	IKZF4 (ENSVURG00010023723) #32	SUOX (ENSVURG00010023726) #33	RAB5B (ENSVURG00010023728) #34	CDK2 (ENSVURG00010023730) #35	PMEL (ENSVURG00010023735) #36	DGKA (ENSVURG00010023742) #37
koala	MODERN SPECIES	37	ENSPCIG00000024634	GLS2 (ENSPCIG00000024635) #7	SPRYD4 (ENSPCIG00000024636) #8	MIP (ENSPCIG00000024637) #9	TIMELESS (ENSPCIG00000024638) #10	ENSPCIG00000037057 #11	STAT2 (ENSPCIG00000024641) #12	IL23A (ENSPCIG00000024642) #13	PAN2 (ENSPCIG00000024643) #14	ENSPCIG00000024644	CS (ENSPCIG00000024645) #16	COQ10A (ENSPCIG00000024646) #17	ANKRD52 (ENSPCIG00000024647) #18	SLC39A5 (ENSPCIG00000024648) #20	ENSPCIG00000024649 #21	RNF41 (ENSPCIG00000024650) #22	SMARCC2 (ENSPCIG00000024651) #23	ENSPCIG00000024652 ##25	MYL6B (ENSPCIG00000031399) #25	ZC3H10 (ENSPCIG00000007018) #27	ENSPCIG00000033124	PA2G4 (ENSPCIG00000007020) #29	ENSPCIG00000007023 #30	ENSPCIG00000032985 #30	ENSPCIG00000034019 ##31	IKZF4 (ENSPCIG00000012937) #32	SUOX (ENSPCIG00000024653) #33	RAB5B (ENSPCIG00000024654) #34	CDK2 (ENSPCIG00000024655) #35	ENSPCIG00000024656 #36	DGKA (ENSPCIG00000024657) #37
Wallaby	MODERN SPECIES	4137																RNF41 (ENSMEUG00000001320) #22	SMARCC2 (ENSMEUG00000001280) #23	MYL6 (ENSMEUG00000001272) ##25	MYL6B (ENSMEUG00000001261) #25	ESYT1 (ENSMEUG00000001227) #26	ZC3H10 (ENSMEUG00000001222) #27
Tasmanian devil	MODERN SPECIES	4	ATP5F1B (ENSSHAG00000002661)	BAZ2A (ENSSHAG00000000118)	RBMS2 (ENSSHAG00000020932)	GLS2 (ENSSHAG00000003536) #7	SPRYD4 (ENSSHAG00000029425) #8	MIP (ENSSHAG00000002486) #9	TIMELESS (ENSSHAG00000000431) #10	STAT2 (ENSSHAG00000000508) #12	IL23A (ENSSHAG00000025056) #13	PAN2 (ENSSHAG00000000122) #14	CS (ENSSHAG00000000672) #16	COQ10A (ENSSHAG00000001551) #17	ANKRD52 (ENSSHAG00000001327) #18	SLC39A5 (ENSSHAG00000002221) #20	NABP2 (ENSSHAG00000002240) #21	ENSSHAG00000002679 #22	SMARCC2 (ENSSHAG00000004114) #23	ENSSHAG00000022868 ##25	MYL6B (ENSSHAG00000004586) #25	ESYT1 (ENSSHAG00000004967) #26	ZC3H10 (ENSSHAG00000030334) #27	PA2G4 (ENSSHAG00000005748) #29	ENSSHAG00000020608 #30	ENSSHAG00000031432 #30	ENSSHAG00000026735 #30	IKZF4 (ENSSHAG00000026492) #32	RAB5B (ENSSHAG00000023920) #34	PMEL (ENSSHAG00000008024) #36	CDK2 (ENSSHAG00000007936) #35	DGKA (ENSSHAG00000008095) #37	PYM1 (ENSSHAG00000025703)
Marsupialia	ANCESTRAL SPECIES																	ENSGT00530000063647.B.n #22
Opossum	MODERN SPECIES	4	ENSMODG00000049174	HGFAC (ENSMODG00000003485)	DOK7 (ENSMODG00000003469)	LRPAP1 (ENSMODG00000003461)	ADRA2C (ENSMODG00000003290)	ENSMODG00000003283	ENSMODG00000043158	CPZ (ENSMODG00000003209)	GPR78 (ENSMODG00000003175)	ENSMODG00000039676	ACOX3 (ENSMODG00000003150)	HTRA3 (ENSMODG00000003113)	SH3TC1 (ENSMODG00000003098)	ABLIM2 (ENSMODG00000003062)	AFAP1 (ENSMODG00000003012)	ENSMODG00000002968 #22	ENSMODG00000037366	ENSMODG00000002955	TADA2B (ENSMODG00000043302)	ENSMODG00000013944	TBC1D14 (ENSMODG00000002932)	KIAA0232 (ENSMODG00000002906)	S100P (ENSMODG00000002897)	MAN2B2 (ENSMODG00000002889)	PPP2R2C (ENSMODG00000002866)	WFS1 (ENSMODG00000002825)	JAKMIP1 (ENSMODG00000002810)	ENSMODG00000029793	CRMP1 (ENSMODG00000001760)	EVC (ENSMODG00000001731)	EVC2 (ENSMODG00000001716)
Marsupialia_b	ANCESTRAL SPECIES	8	ENSGT00940000159778	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00530000063647.B.n #22	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT01030000234638.b.a.b	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000016928	ENSGT00940000153713.B.c	ENSGT00390000003220	ENSGT01030000234527.A.a.b.b.b	ENSGT00940000154127.B	ENSGT00940000154127.A	ENSGT00940000160490
Tasmanian devil	MODERN SPECIES	5	DOK7 (ENSSHAG00000029804)	LRPAP1 (ENSSHAG00000014590)	ENSSHAG00000021069	ENSSHAG00000009037	ENSSHAG00000024016	CPZ (ENSSHAG00000002362)	GPR78 (ENSSHAG00000031228)	TRMT44 (ENSSHAG00000027526)	ENSSHAG00000027734	ENSSHAG00000016195	HTRA3 (ENSSHAG00000015806)	SH3TC1 (ENSSHAG00000015357)	ABLIM2 (ENSSHAG00000014165)	AFAP1 (ENSSHAG00000012867)	SORCS2 (ENSSHAG00000031117)	ENSSHAG00000003330 #22	GRPEL1 (ENSSHAG00000007667)	ENSSHAG00000007482	TADA2B (ENSSHAG00000031196)	TBC1D14 (ENSSHAG00000006157)	KIAA0232 (ENSSHAG00000004235)	ENSSHAG00000000132	ENSSHAG00000027596	ENSSHAG00000001652	ENSSHAG00000025526	ENSSHAG00000017856	DLC1 (ENSSHAG00000017773)	SGCZ (ENSSHAG00000016991)	TUSC3 (ENSSHAG00000015945)	ENSSHAG00000015271	FGF20 (ENSSHAG00000030570)
Diprotodontia	ANCESTRAL SPECIES	10	ENSGT00940000159778	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00530000063647.B.n #22	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT01030000234638.b.a.b	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000016928	ENSGT00940000153713.B.c	ENSGT00390000003220	ENSGT01030000234527.A.a.b.b.b	ENSGT00940000154127.B	ENSGT00940000154127.A	ENSGT00940000160490
Diprotodontia_a	ANCESTRAL SPECIES	12	ENSGT00940000159778	ENSGT00390000015386	ENSGT00390000004855	ENSGT00940000161707.b	ENSGT00940000162580	ENSGT00940000167254	ENSGT00940000156391	ENSGT00950000183001.b	ENSGT00390000000645	ENSGT00940000159423	ENSGT00940000159570	ENSGT00530000063812.A	ENSGT00950000182850.a.b.a.a	ENSGT00950000183067.a.a	ENSGT01030000234563.b.a.a	ENSGT00530000063647.B.n #22	ENSGT00390000005589.a.a	ENSGT00940000157318	ENSGT00940000154521.A	ENSGT00940000157250	ENSGT00390000018549	ENSGT00940000162871	ENSGT01030000234638.b.a.b	ENSGT00950000182864.a.b.b.a.b.a.a.b	ENSGT00390000016928	ENSGT00940000153713.B.c	ENSGT00390000003220	ENSGT01030000234527.A.a.b.b.b	ENSGT00940000154127.B	ENSGT00940000154127.A	ENSGT00940000160490
Common wonbat	MODERN SPECIES	1054	RGS12 (ENSVURG00010021768)	HGFAC (ENSVURG00010021775)	DOK7 (ENSVURG00010021778)	LRPAP1 (ENSVURG00010021783)	ADRA2C (ENSVURG00010021786)	HMX1 (ENSVURG00010021792)	CPZ (ENSVURG00010021800)	GPR78 (ENSVURG00010021802)	TRMT44 (ENSVURG00010021809)	ACOX3 (ENSVURG00010021844)	HTRA3 (ENSVURG00010021852)	SH3TC1 (ENSVURG00010021859)	ABLIM2 (ENSVURG00010021886)	AFAP1 (ENSVURG00010021912)	SORCS2 (ENSVURG00010021952)	ENSVURG00010022120 #22	GRPEL1 (ENSVURG00010022126)	TADA2B (ENSVURG00010022133)	ENSVURG00010022142	TBC1D14 (ENSVURG00010022152)	KIAA0232 (ENSVURG00010022163)	ENSVURG00010022173	MAN2B2 (ENSVURG00010022178)	PPP2R2C (ENSVURG00010022192)	WFS1 (ENSVURG00010022202)	JAKMIP1 (ENSVURG00010022217)	CRMP1 (ENSVURG00010022248)	EVC (ENSVURG00010022280)	EVC2 (ENSVURG00010022292)	STK32B (ENSVURG00010022325)	CYTL1 (ENSVURG00010022336)
Platypus	MODERN SPECIES	1	BAZ2A (ENSOANG00000004476)	RBMS2 (ENSOANG00000004477)	GLS2 (ENSOANG00000043788) #7	SPRYD4 (ENSOANG00000014627) #8	MIP (ENSOANG00000011653) #9	TIMELESS (ENSOANG00000012531) #10	ENSOANG00000012739 #12	IL23A (ENSOANG00000012738) #13	PAN2 (ENSOANG00000005151) #14	CNPY2 (ENSOANG00000036646) #15	CS (ENSOANG00000031970) #16	COQ10A (ENSOANG00000007562) #17	ANKRD52 (ENSOANG00000041448) #18	SLC39A5 (ENSOANG00000008015) #20	NABP2 (ENSOANG00000021298) #21	RNF41 (ENSOANG00000006662) #22	SMARCC2 (ENSOANG00000039228) #23	MYL6 (ENSOANG00000036553) #24	ENSOANG00000045182 #25	ESYT1 (ENSOANG00000006258) #26	ZC3H10 (ENSOANG00000037302) #27	ENSOANG00000038262	PA2G4 (ENSOANG00000000617) #29	ERBB3 (ENSOANG00000042871) #30	RPS26 (ENSOANG00000048065) ##31	IKZF4 (ENSOANG00000036126) #32	SUOX (ENSOANG00000043551) #33	RAB5B (ENSOANG00000040014) #34	CDK2 (ENSOANG00000049953) #35	PMEL (ENSOANG00000000740) #36	DGKA (ENSOANG00000047367) #37
Sauria	ANCESTRAL SPECIES	25	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT01060000249814	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37
Lepidosauria	ANCESTRAL SPECIES	175														ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000161155 #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785	ENSGT00950000183019.f.b.a	ENSGT00390000016495	ENSGT00940000160329	ENSGT00940000160653	ENSGT00950000183080.a.a	ENSGT00940000159521	ENSGT00940000153804.B	ENSGT00940000158666	ENSGT00940000155606.b	ENSGT00950000182837.b.a
Laterata	ANCESTRAL SPECIES	1	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d.k #14	ENSGT00940000161155 #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079.m #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785	ENSGT00950000183019.f.b.a	ENSGT00990000213996	ENSGT00940000160329	ENSGT00940000160653	ENSGT00950000183080.a.a	ENSGT00940000159521	ENSGT00940000153804.B	ENSGT00940000158666	ENSGT00940000155606.b	ENSGT00950000182837.b.a
Common wall lizard	MODERN SPECIES	10	MIP (ENSPMRG00000002865) #9	TIMELESS (ENSPMRG00000002832) #10	ENSPMRG00000002798 #11	ENSPMRG00000002793 #11	STAT2 (ENSPMRG00000002779) #12	PAN2 (ENSPMRG00000002751) #14	ENSPMRG00000002728 #14	SLC39A5 (ENSPMRG00000002718) #20	ANKRD52 (ENSPMRG00000002694) #18	COQ10A (ENSPMRG00000002139) #17	CS (ENSPMRG00000002136) #16	ENSPMRG00000002131	ENSPMRG00000002127 #21	ENSPMRG00000002113 #21	ENSPMRG00000002103	RNF41 (ENSPMRG00000002097) #22	ENSPMRG00000002092	ENSPMRG00000002086	COL2A1 (ENSPMRG00000001915)	SENP1 (ENSPMRG00000001863)	PFKM (ENSPMRG00000001817)	ASB8 (ENSPMRG00000001799)	ENSPMRG00000001796	ENSPMRG00000001786	PFDN5 (ENSPMRG00000001764)	ESPL1 (ENSPMRG00000001725)	MFSD5 (ENSPMRG00000001700)	ENSPMRG00000001690	RARG (ENSPMRG00000001677)	ITGB7 (ENSPMRG00000001666)	ZNF740 (ENSPMRG00000001660)
Argentine black and white tegu	MODERN SPECIES	18	RBMS2 (ENSSMRG00000012191)	GLS2 (ENSSMRG00000012188) #7	SPRYD4 (ENSSMRG00000012186) #8	ENSSMRG00000012183	MIP (ENSSMRG00000012178) #9	TIMELESS (ENSSMRG00000012176) #10	ENSSMRG00000012175 #11	STAT2 (ENSSMRG00000012169) #12	PAN2 (ENSSMRG00000012163) #14	SLC39A5 (ENSSMRG00000012114) #20	ANKRD52 (ENSSMRG00000012112) #18	COQ10A (ENSSMRG00000012110) #17	CS (ENSSMRG00000012109) #16	ENSSMRG00000012090	NABP2 (ENSSMRG00000012087) #21	RNF41 (ENSSMRG00000012083) #22	SMARCC2 (ENSSMRG00000012077) #23	MYL6 (ENSSMRG00000012073) #24	ENSSMRG00000012071 ##25	ESYT1 (ENSSMRG00000012069) #26	INPP1 (ENSSMRG00000012047)	PRKAG1 (ENSSMRG00000012046)	WNT1 (ENSSMRG00000012042)	WNT10B (ENSSMRG00000012040)	ARF3 (ENSSMRG00000012037)	FKBP11 (ENSSMRG00000012020)	CCDC65 (ENSSMRG00000012018)	RND1 (ENSSMRG00000012016)	DDX23 (ENSSMRG00000012008)	CACNB3 (ENSSMRG00000012001)	ADCY6 (ENSSMRG00000011989)
Toxicofera	ANCESTRAL SPECIES	19	ENSGT00940000155250	ENSGT00390000010463.a.a.a #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000161155.h #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785	ENSGT00950000183019.f.b.a	ENSGT00390000016495	ENSGT00940000160329	ENSGT00940000160653	ENSGT00950000183080.a.a	ENSGT00940000159521	ENSGT00940000153804.B	ENSGT00940000158666	ENSGT00940000155606.b	ENSGT00950000182837.b.a
Elapidae	ANCESTRAL SPECIES	2	ENSGT00390000010463.a.a.a.g.a #7	ENSGT00390000010463.a.a.a.g.b #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000161155.h #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785.r	ENSGT00940000156785.q	ENSGT00950000183019.f.b.a	ENSGT00390000016495	ENSGT00940000157422.e	ENSGT00960000187237	ENSGT00940000161557.a.b	ENSGT00940000161557.b	ENSGT00940000160612.d.n.a	ENSGT01050000244890.a.b.b	ENSGT00940000153993.B
Elapidae_a	ANCESTRAL SPECIES	68	ENSGT00390000010463.a.a.a.g.a #7	ENSGT00390000010463.a.a.a.g.b #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.d #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000161155.h #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785.r	ENSGT00950000183019.f.b.a	ENSGT00390000016495	ENSGT00940000157422.e	ENSGT00960000187237	ENSGT00940000161557.a.b	ENSGT00940000161557.b	ENSGT00940000160612.d.n.a	ENSGT01050000244890.a.b.b	ENSGT00940000153993.B	ENSGT00940000161279
Acanthophiinae	ANCESTRAL SPECIES	64	ENSGT00390000010463.a.a.a.g.a #7	ENSGT00390000010463.a.a.a.g.b #7	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104.d #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000161155.h #20	ENSGT00950000182908.B #18	ENSGT00940000160056 #17	ENSGT00390000006813 #16	ENSGT00940000164642	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00940000156785.r	ENSGT00950000183019.f.b.a	ENSGT00390000016495	ENSGT00940000157422.e	ENSGT00960000187237	ENSGT00940000161557.a.b	ENSGT00940000161557.b	ENSGT00940000160612.d.n.a	ENSGT01050000244890.a.b.b	ENSGT00940000153993.B	ENSGT00940000161279
Mainland tiger snake	MODERN SPECIES	123	ENSNSUG00000002073	GLS2 (ENSNSUG00000002077) #7	SPRYD4 (ENSNSUG00000002185) #8	ENSNSUG00000002186	MIP (ENSNSUG00000002266) #9	TIMELESS (ENSNSUG00000002327) #10	ENSNSUG00000002328 #11	STAT2 (ENSNSUG00000002329) #12	PAN2 (ENSNSUG00000002331) #14	ENSNSUG00000002410 #20	ANKRD52 (ENSNSUG00000002412) #18	COQ10A (ENSNSUG00000002416) #17	CS (ENSNSUG00000002424) #16	ENSNSUG00000002565	NABP2 (ENSNSUG00000002566) #21	RNF41 (ENSNSUG00000002567) #22	SMARCC2 (ENSNSUG00000002572) #23	MYL6 (ENSNSUG00000005250) #24	ENSNSUG00000005252 ##25	ESYT1 (ENSNSUG00000005275) #26	INPP1 (ENSNSUG00000006926)	PRKAG1 (ENSNSUG00000006927)	ENSNSUG00000006928	ENSNSUG00000006929	ENSNSUG00000006932	ENSNSUG00000006936	AQP5 (ENSNSUG00000006939)	AQP2 (ENSNSUG00000006952)	FAIM2 (ENSNSUG00000006958)	BCDIN3D (ENSNSUG00000006978)	ENSNSUG00000006980
Eastern brown snake	MODERN SPECIES	94	GLS2 (ENSPTXG00000007203) #7	SPRYD4 (ENSPTXG00000007554) #8	ENSPTXG00000007555	MIP (ENSPTXG00000007557) #9	TIMELESS (ENSPTXG00000007560) #10	ENSPTXG00000007587	ENSPTXG00000007588 #12	ENSPTXG00000007589 #12	PAN2 (ENSPTXG00000007590) #14	ENSPTXG00000007592 #20	ANKRD52 (ENSPTXG00000007593) #18	COQ10A (ENSPTXG00000007595) #17	CS (ENSPTXG00000007597) #16	ENSPTXG00000007599	NABP2 (ENSPTXG00000007601) #21	RNF41 (ENSPTXG00000007604) #22	SMARCC2 (ENSPTXG00000007606) #23	MYL6 (ENSPTXG00000007614) #24	ENSPTXG00000007629 ##25	ESYT1 (ENSPTXG00000007974) #26	INPP1 (ENSPTXG00000008235)	PRKAG1 (ENSPTXG00000008236)	ENSPTXG00000008237	ENSPTXG00000008240	ENSPTXG00000008248	ENSPTXG00000008252	AQP5 (ENSPTXG00000008312)	AQP2 (ENSPTXG00000008313)	FAIM2 (ENSPTXG00000008317)	BCDIN3D (ENSPTXG00000008330)	ENSPTXG00000008332
Blue-lipped sea krait	MODERN SPECIES	9006															ENSLLTG00000013546	RNF41 (ENSLLTG00000003495) #22	SMARCC2 (ENSLLTG00000003535) #23
Indian cobra	MODERN SPECIES	1	RBMS2 (ENSNNAG00000000605)	ENSNNAG00000000622 #7	ENSNNAG00000000639 #7	SPRYD4 (ENSNNAG00000000656) #8	MIP (ENSNNAG00000000666) #9	TIMELESS (ENSNNAG00000000693) #10	ENSNNAG00000000751 #11	ENSNNAG00000000763 #11	STAT2 (ENSNNAG00000000784) #12	PAN2 (ENSNNAG00000000873) #14	ANKRD52 (ENSNNAG00000001180) #18	COQ10A (ENSNNAG00000001816) #17	CS (ENSNNAG00000001828) #16	ENSNNAG00000001849	NABP2 (ENSNNAG00000001869) #21	RNF41 (ENSNNAG00000001882) #22	SMARCC2 (ENSNNAG00000001914) #23	MYL6 (ENSNNAG00000001968) #24	ENSNNAG00000001988 ##25	ESYT1 (ENSNNAG00000002182) #26	ENSNNAG00000002746	ENSNNAG00000002754	PRKAG1 (ENSNNAG00000002766)	ENSNNAG00000002781	SLC4A8 (ENSNNAG00000003025)	ENSNNAG00000006112	AQP5 (ENSNNAG00000006205)	ENSNNAG00000006220	ENSNNAG00000006244	ENSNNAG00000006330	BCDIN3D (ENSNNAG00000006335)
Lizard	MODERN SPECIES	1	SPRYD4 (ENSACAG00000016562) #8	ENSACAG00000029542 #9	ENSACAG00000016525 #9	TIMELESS (ENSACAG00000016465) #10	ENSACAG00000043043	APOF (ENSACAG00000040823) #11	STAT2 (ENSACAG00000023449) #12	PAN2 (ENSACAG00000007067) #14	ENSACAG00000011728	SLC39A5 (ENSACAG00000007284) #20	ANKRD52 (ENSACAG00000007304) #18	COQ10A (ENSACAG00000007539) #17	CS (ENSACAG00000007556) #16	ENSACAG00000007638	NABP2 (ENSACAG00000007650) #21	RNF41 (ENSACAG00000007679) #22	ENSACAG00000036261	SMARCC2 (ENSACAG00000007714) #23	MYL6 (ENSACAG00000007876) #24	ENSACAG00000022592 ##25	ESYT1 (ENSACAG00000007931) #26	ENSACAG00000008047	PRKAG1 (ENSACAG00000008069)	DDN (ENSACAG00000027539)	WNT1 (ENSACAG00000038804)	WNT10B (ENSACAG00000008227)	ARF3 (ENSACAG00000008240)	FKBP11 (ENSACAG00000039190)	CCDC65 (ENSACAG00000008278)	ENSACAG00000040367	ENSACAG00000040754
tuatara	MODERN SPECIES	600														ENSSPUG00000002435	NABP2 (ENSSPUG00000002441) #21	RNF41 (ENSSPUG00000002454) #22	MYL6 (ENSSPUG00000002539) #24	ENSSPUG00000002548 ##25	ESYT1 (ENSSPUG00000002804) #26	PAN2 (ENSSPUG00000004270) #14	STAT2 (ENSSPUG00000004289) #12	APOF (ENSSPUG00000004308) #11	TIMELESS (ENSSPUG00000004380) #10	MIP (ENSSPUG00000004709) #9	ENSSPUG00000004716	SPRYD4 (ENSSPUG00000004737) #8	ENSSPUG00000004747	RBMS2 (ENSSPUG00000004756)	BAZ2A (ENSSPUG00000004790)	ATP5F1B (ENSSPUG00000004917)	PTGES3 (ENSSPUG00000004964)
Archelosauria	ANCESTRAL SPECIES	26	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Cryptodira	ANCESTRAL SPECIES	25	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Testudinoidea	ANCESTRAL SPECIES	21	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Testudinidae	ANCESTRAL SPECIES	25	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Goode s thornscrub tortoise	MODERN SPECIES	17	SPRYD4 (ENSGEVG00005002694) #8	ENSGEVG00005002712	MIP (ENSGEVG00005002732) #9	TIMELESS (ENSGEVG00005002758) #10	ENSGEVG00005002798 #11	STAT2 (ENSGEVG00005002819) #12	PAN2 (ENSGEVG00005002917) #14	ENSGEVG00005002956	CS (ENSGEVG00005002985) #16	ENSGEVG00005003023	COQ10A (ENSGEVG00005003085) #17	ANKRD52 (ENSGEVG00005003107) #18	SLC39A5 (ENSGEVG00005003157) #20	NABP2 (ENSGEVG00005003200) #21	SMARCC2 (ENSGEVG00005003223) #23	RNF41 (ENSGEVG00005003265) #22	MYL6 (ENSGEVG00005003281) #24	ENSGEVG00005003299 ##25	ESYT1 (ENSGEVG00005003676) #26	ZC3H10 (ENSGEVG00005005871) #27	PA2G4 (ENSGEVG00005005896) #29	ERBB3 (ENSGEVG00005005948) #30	RPS26 (ENSGEVG00005006061) ##31	IKZF4 (ENSGEVG00005006094) #32	SUOX (ENSGEVG00005006141) #33	RAB5B (ENSGEVG00005006154) #34	CDK2 (ENSGEVG00005006169) #35	PMEL (ENSGEVG00005006205) #36	DGKA (ENSGEVG00005006437) #37	PYM1 (ENSGEVG00005006664)	MMP19 (ENSGEVG00005006682)
Abingdon island giant tortoise	MODERN SPECIES	1111	ATP5F1B (ENSCABG00000005480)	BAZ2A (ENSCABG00000005491)	RBMS2 (ENSCABG00000005725)	SPRYD4 (ENSCABG00000005856) #8	MIP (ENSCABG00000005862) #9	TIMELESS (ENSCABG00000005900) #10	ENSCABG00000005905 #11	STAT2 (ENSCABG00000005909) #12	PAN2 (ENSCABG00000005914) #14	ENSCABG00000006007	CS (ENSCABG00000006009) #16	COQ10A (ENSCABG00000006012) #17	ANKRD52 (ENSCABG00000006014) #18	SLC39A5 (ENSCABG00000006018) #20	NABP2 (ENSCABG00000006021) #21	RNF41 (ENSCABG00000006022) #22	ENSCABG00000006026 #23	ENSCABG00000006029 #23	MYL6 (ENSCABG00000006039) #24	ENSCABG00000006080 ##25	ESYT1 (ENSCABG00000006129) #26	ZC3H10 (ENSCABG00000006844) #27	PA2G4 (ENSCABG00000006850) #29	ERBB3 (ENSCABG00000006905) #30	ENSCABG00000006932 ##31	IKZF4 (ENSCABG00000006936) #32	SUOX (ENSCABG00000006950) #33	RAB5B (ENSCABG00000006954) #34	CDK2 (ENSCABG00000006959) #35	ENSCABG00000006986 #36	DGKA (ENSCABG00000006988) #37
Emydidae	ANCESTRAL SPECIES	49	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.e #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT01030000234570.d.b.a.a.b ##25	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.a.a #31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Three-toed box turtle	MODERN SPECIES	311									PAN2 (ENSTMTG00000019807) #14	ENSTMTG00000019827	CS (ENSTMTG00000019841) #16	COQ10A (ENSTMTG00000019854) #17	ANKRD52 (ENSTMTG00000019878) #18	SLC39A5 (ENSTMTG00000019973) #20	NABP2 (ENSTMTG00000019976) #21	RNF41 (ENSTMTG00000019984) #22	SMARCC2 (ENSTMTG00000020061) #23	MYL6 (ENSTMTG00000020861) #24	ZC3H10 (ENSTMTG00000020872) #27	PA2G4 (ENSTMTG00000020878) #29	ENSTMTG00000020944 #30	ENSTMTG00000021142 ##31	IKZF4 (ENSTMTG00000021144) #32	SUOX (ENSTMTG00000021150) #33	CDK2 (ENSTMTG00000021155) #35	PMEL (ENSTMTG00000021163) #36	DGKA (ENSTMTG00000021190) #37	DNAJC14 (ENSTMTG00000021235)	ORMDL2 (ENSTMTG00000021243)	SARNP (ENSTMTG00000021256)	ENSTMTG00000021287
painted turtle	MODERN SPECIES	973	ENSCPBG00000014178	RBMS2 (ENSCPBG00000014176)	SPRYD4 (ENSCPBG00000014175) #8	MIP (ENSCPBG00000014124) #9	TIMELESS (ENSCPBG00000014064) #10	ENSCPBG00000014040 #11	ENSCPBG00000014036 #12	PAN2 (ENSCPBG00000014029) #14	ENSCPBG00000014023	CS (ENSCPBG00000013780) #16	COQ10A (ENSCPBG00000013774) #17	ENSCPBG00000013773	ANKRD52 (ENSCPBG00000013771) #18	ENSCPBG00000013770 #20	NABP2 (ENSCPBG00000013768) #21	RNF41 (ENSCPBG00000013767) #22	SMARCC2 (ENSCPBG00000012854) #23	MYL6 (ENSCPBG00000012835) #24	ENSCPBG00000012834 ##25	ESYT1 (ENSCPBG00000012832) #26	ZC3H10 (ENSCPBG00000012828) #27	PA2G4 (ENSCPBG00000012820) #29	ERBB3 (ENSCPBG00000012759) #30	RPS26 (ENSCPBG00000012722) #31	IKZF4 (ENSCPBG00000012719) #32	SUOX (ENSCPBG00000012716) #33	ENSCPBG00000012714	RAB5B (ENSCPBG00000012712) #34	CDK2 (ENSCPBG00000012709) #35	PMEL (ENSCPBG00000012708) #36	DGKA (ENSCPBG00000012632) #37
Chinese turtle	MODERN SPECIES	1705	ENSPSIG00000003352	PRIM1 (ENSPSIG00000003343)	ENSPSIG00000003335	PTGES3 (ENSPSIG00000003333)	ATP5F1B (ENSPSIG00000003329)	ENSPSIG00000003327	SPRYD4 (ENSPSIG00000000828) #8	MIP (ENSPSIG00000003323) #9	TIMELESS (ENSPSIG00000003292) #10	PAN2 (ENSPSIG00000003267) #14	ENSPSIG00000003265	CS (ENSPSIG00000003243) #16	COQ10A (ENSPSIG00000003240) #17	ANKRD52 (ENSPSIG00000003197) #18	NABP2 (ENSPSIG00000003187) #21	RNF41 (ENSPSIG00000003175) #22	SMARCC2 (ENSPSIG00000003139) #23	MYL6 (ENSPSIG00000003136) #24	ENSPSIG00000003128 ##25	ESYT1 (ENSPSIG00000003120) #26	ZC3H10 (ENSPSIG00000000811) #27	PA2G4 (ENSPSIG00000003099) #29	ENSPSIG00000003096 #30	RPS26 (ENSPSIG00000003091) ##31	IKZF4 (ENSPSIG00000003074) #32	SUOX (ENSPSIG00000003071) #33	RAB5B (ENSPSIG00000003068) #34	ENSPSIG00000003060 #36	DGKA (ENSPSIG00000003049) #37	PYM1 (ENSPSIG00000003043)	CDK2 (ENSPSIG00000003036) #35
Archosauria	ANCESTRAL SPECIES	32	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000159780 #8	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
Australian saltwater crocodile	MODERN SPECIES	9			RBMS2 (ENSCPRG00005005716)	SPRYD4 (ENSCPRG00005005725) #8	MIP (ENSCPRG00005005727) #9	TIMELESS (ENSCPRG00005005746) #10	ENSCPRG00005005879 #11	STAT2 (ENSCPRG00005005902) #12	PAN2 (ENSCPRG00005005971) #14	ENSCPRG00005006050	CS (ENSCPRG00005006073) #16	COQ10A (ENSCPRG00005006156) #17	ANKRD52 (ENSCPRG00005006165) #18	SLC39A5 (ENSCPRG00005006191) #20	NABP2 (ENSCPRG00005006199) #21	RNF41 (ENSCPRG00005006204) #22
Aves	ANCESTRAL SPECIES	37	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
African ostrich	MODERN SPECIES	774				ZBTB39 (ENSSCUG00000010505)	GPR182 (ENSSCUG00000010507)	ENSSCUG00000010508	ENSSCUG00000010509	ENSSCUG00000010510	PTGES3 (ENSSCUG00000010513)	ATP5F1B (ENSSCUG00000010522)	ENSSCUG00000010533	ENSSCUG00000010535	TIMELESS (ENSSCUG00000010541) #10	PAN2 (ENSSCUG00000010551) #14	ANKRD52 (ENSSCUG00000010638) #18	RNF41 (ENSSCUG00000010720) #22
Neognathae	ANCESTRAL SPECIES	31	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
Galloanserae	ANCESTRAL SPECIES	39	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155.c #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107
Anatidae	ANCESTRAL SPECIES	188																ENSGT00530000063647.B #22	ENSGT00940000155746 #23
Pink-footed goose	MODERN SPECIES	671																RNF41 (ENSABRG00000015585) #22	SMARCC2 (ENSABRG00000015650) #23
Duck	MODERN SPECIES	584																RNF41 (ENSAPLG00000029778) #22
Phasianidae	ANCESTRAL SPECIES	25	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155.c #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
Phasianidae_b	ANCESTRAL SPECIES	35	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155.c #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b
Chicken	MODERN SPECIES	27	BAZ2A (ENSGALG00010025080)	RBMS2 (ENSGALG00010025056)	ENSGALG00010025030	MIP (ENSGALG00010025019) #9	TIMELESS (ENSGALG00010024989) #10	ENSGALG00010024983 #11	STAT2 (ENSGALG00010024965) #12	ENSGALG00010024954	PAN2 (ENSGALG00010024949) #14	ENSGALG00010024944	CS (ENSGALG00010024933) #16	COQ10A (ENSGALG00010024939) #17	ANKRD52 (ENSGALG00010024919) #18	SLC39A5 (ENSGALG00010024909) #20	NABP2 (ENSGALG00010024898) #21	RNF41 (ENSGALG00010024896) #22	SMARCC2 (ENSGALG00010024890) #23	MYL6 (ENSGALG00010024882) #24	ESYT1 (ENSGALG00010024848) #26	PA2G4 (ENSGALG00010024839) #29	ERBB3 (ENSGALG00010024829) #30	RPS26 (ENSGALG00010024822) ##31	IKZF4 (ENSGALG00010024797) #32	SUOX (ENSGALG00010024789) #33	RAB5B (ENSGALG00010024778) #34	CDK2 (ENSGALG00010024756) #35	PMEL (ENSGALG00010024745) #36	DGKA (ENSGALG00010024736) #37	PYM1 (ENSGALG00010024719)	ENSGALG00010024698	ENSGALG00010024690
Turkey	MODERN SPECIES	360																ENSMGAG00000006916 #22
Japanese quail	MODERN SPECIES	497	ITGA7 (ENSCJPG00005003565)	ENSCJPG00005003564	RDH5 (ENSCJPG00005003563)	CD63 (ENSCJPG00005003562)	ENSCJPG00005003561	GDF11 (ENSCJPG00005003560)	SARNP (ENSCJPG00005003559)	ORMDL2 (ENSCJPG00005003558)	DNAJC14 (ENSCJPG00005003557)	GLI1 (ENSCJPG00005003556)	ENSCJPG00005003555	ENSCJPG00005003554	R3HDM2 (ENSCJPG00005003551)	COQ10A (ENSCJPG00005003550) #17	ANKRD52 (ENSCJPG00005003546) #18	RNF41 (ENSCJPG00005003541) #22	SMARCC2 (ENSCJPG00005003537) #23	ZC3H10 (ENSCJPG00005003536) #27	PA2G4 (ENSCJPG00005003533) #29	ERBB3 (ENSCJPG00005002126) #30	RPS26 (ENSCJPG00005002007) ##31	IKZF4 (ENSCJPG00005001995) #32	SUOX (ENSCJPG00005001988) #33	RAB5B (ENSCJPG00005001980) #34	CDK2 (ENSCJPG00005001785) #35	DGKA (ENSCJPG00005001769) #37	ENSCJPG00005001765	ENSCJPG00005001764	ENSCJPG00005001762	ENSCJPG00005001756	TUBA1B (ENSCJPG00005001751)
Neognathae_b	ANCESTRAL SPECIES	30	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
Passeriformes	ANCESTRAL SPECIES	42	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Passeriformes_d	ANCESTRAL SPECIES	33	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Passeriformes_g	ANCESTRAL SPECIES	32	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Passeroidea	ANCESTRAL SPECIES	35	ENSGT00550000074800	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079.o #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	22	PTGES3 (ENSTGUG00000028263)	ATP5F1B (ENSTGUG00000015620)	BAZ2A (ENSTGUG00000022334)	ENSTGUG00000019418	ENSTGUG00000019692 #9	ENSTGUG00000029018 #10	ENSTGUG00000023554 #11	ENSTGUG00000020708 #12	ENSTGUG00000024359 #14	ENSTGUG00000025066	ENSTGUG00000023442 #16	ENSTGUG00000019109 #17	ENSTGUG00000022936 #18	ENSTGUG00000028882 #20	ENSTGUG00000023260 #21	ENSTGUG00000025873 #22	ENSTGUG00000024750 #23	ENSTGUG00000029289 #24	ENSTGUG00000029121 #26	ENSTGUG00000020400 #27	ENSTGUG00000023594 #29	ENSTGUG00000023193 #30	RPS26 (ENSTGUG00000019146) ##31	ENSTGUG00000029408 #32	ENSTGUG00000029707 #33	ENSTGUG00000023154 #35	ENSTGUG00000025200 #36	ENSTGUG00000025573	ENSTGUG00000022032	METTL1 (ENSTGUG00000027215)	ENSTGUG00000020185
Zebra finch	MODERN SPECIES	22	ENSTGUG00000023498	ENSTGUG00000029593	ENSTGUG00000021194	ENSTGUG00000014512 #9	ENSTGUG00000021929 #10	ENSTGUG00000027257	ENSTGUG00000023511 #12	ENSTGUG00000023297	ENSTGUG00000014514 #14	ENSTGUG00000022632	ENSTGUG00000021914 #16	ENSTGUG00000025963 #17	ENSTGUG00000022131 #18	ENSTGUG00000023580 #20	ENSTGUG00000025361 #21	ENSTGUG00000023245 #22	ENSTGUG00000025252 #23	ENSTGUG00000022398 #24	ENSTGUG00000026256 #26	ENSTGUG00000024950 #27	ENSTGUG00000021908 #29	ENSTGUG00000026926 #30	ENSTGUG00000016992 ##31	ENSTGUG00000029425 #32	ENSTGUG00000022410 #33	RAB5B (ENSTGUG00000021392) #34	ENSTGUG00000021777 #35	ENSTGUG00000003763 #36	ENSTGUG00000027969	ENSTGUG00000022194	ENSTGUG00000020797
Medium ground finch	MODERN SPECIES	530																RNF41 (ENSGFOG00000009919) #22	ENSGFOG00000009927 #23
Neognathae_c	ANCESTRAL SPECIES	34	ENSGT00940000159490	ENSGT00940000155250	ENSGT00940000156037.b	ENSGT00940000156260 #9	ENSGT00390000015124 #10	ENSGT00500000045104 #11	ENSGT01050000244905.C.g #12	ENSGT01050000246713	ENSGT00390000013978.d #14	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a.a.b #24	ENSGT00940000156561.b #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00730000111107	ENSGT00390000016940.c.a
Kakapo	MODERN SPECIES	15	RBMS2 (ENSSHBG00005015893)	ENSSHBG00005015888	MIP (ENSSHBG00005015885) #9	ENSSHBG00005015882	ENSSHBG00005015871 #11	ENSSHBG00005015865 #12	ENSSHBG00005015853 #12	ENSSHBG00005015848	PAN2 (ENSSHBG00005015834) #14	ENSSHBG00005015828	CS (ENSSHBG00005015825) #16	COQ10A (ENSSHBG00005015819) #17	ANKRD52 (ENSSHBG00005015076) #18	SLC39A5 (ENSSHBG00005014934) #20	NABP2 (ENSSHBG00005014941) #21	RNF41 (ENSSHBG00005014923) #22	SMARCC2 (ENSSHBG00005014904) #23	MYL6 (ENSSHBG00005014878) #24	ESYT1 (ENSSHBG00005014865) #26	PA2G4 (ENSSHBG00005014848) #29	ERBB3 (ENSSHBG00005014814) #30	RPS26 (ENSSHBG00005014767) ##31	ENSSHBG00005014759	ENSSHBG00005014753	IKZF4 (ENSSHBG00005014750) #32	RAB5B (ENSSHBG00005014743) #34	CDK2 (ENSSHBG00005014733) #35	PMEL (ENSSHBG00005014726) #36	ENSSHBG00005014706	SCN8A (ENSSHBG00005013179)	FIGNL2 (ENSSHBG00005013029)
Golden eagle	MODERN SPECIES	6	PTGES3 (ENSACCG00020015514)	ATP5F1B (ENSACCG00020015476)	RBMS2 (ENSACCG00020015428)	MIP (ENSACCG00020015403) #9	TIMELESS (ENSACCG00020015371) #10	ENSACCG00020015345 #11	STAT2 (ENSACCG00020015315) #12	ENSACCG00020015282	PAN2 (ENSACCG00020015236) #14	ENSACCG00020015206	CS (ENSACCG00020015191) #16	COQ10A (ENSACCG00020015178) #17	ANKRD52 (ENSACCG00020015109) #18	SLC39A5 (ENSACCG00020015008) #20	NABP2 (ENSACCG00020014975) #21	RNF41 (ENSACCG00020014947) #22	SMARCC2 (ENSACCG00020014902) #23	MYL6 (ENSACCG00020014870) #24	ESYT1 (ENSACCG00020014812) #26	ZC3H10 (ENSACCG00020014790) #27	PA2G4 (ENSACCG00020014776) #29	ERBB3 (ENSACCG00020013807) #30	RPS26 (ENSACCG00020012788) ##31	IKZF4 (ENSACCG00020012745) #32	SUOX (ENSACCG00020012692) #33	RAB5B (ENSACCG00020012674) #34	CDK2 (ENSACCG00020012644) #35	PMEL (ENSACCG00020012575) #36	DGKA (ENSACCG00020012464) #37	PYM1 (ENSACCG00020012415)	ENSACCG00020012386
Anura	ANCESTRAL SPECIES	3	ENSGT00390000001138.a	ENSGT00940000161742	ENSGT00390000005536	ENSGT00940000161997.b	ENSGT00940000159891	ENSGT00390000002689	ENSGT00940000161168	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT01010000224489.A	ENSGT01000000221942	ENSGT00950000182908.B #18	ENSGT00940000161155.a #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000155746 #23	ENSGT01030000234570.d.b.a.a #25	ENSGT00940000156561.b.a #26	ENSGT00950000182897.A #27	ENSGT00940000154281 #29	ENSGT00940000156107 #30	ENSGT00390000002517.b ##31	ENSGT00940000158308 #32	ENSGT00390000003749 #33	ENSGT00940000160756 #34	ENSGT00940000159517 #35	ENSGT00950000183188.A.a #36	ENSGT00940000157144 #37	ENSGT00390000013978.d #14	ENSGT00940000161052.a
Leishan spiny toad	MODERN SPECIES	1351																RNF41 (ENSLLEG00000016329) #22
Frog	MODERN SPECIES	2	itga7 (ENSXETG00000034098)	bloc1s1 (ENSXETG00000017483)	rdh5 (ENSXETG00000017484)	ENSXETG00000042895	cd63 (ENSXETG00000017488)	ENSXETG00000009512	wdr61 (ENSXETG00000009511)	cnpy2 (ENSXETG00000009510)	cs (ENSXETG00000009506) #16	coq10a (ENSXETG00000034920) #17	ENSXETG00000036534	uqcc3 (ENSXETG00000039680)	ankrd52 (ENSXETG00000009503) #18	slc39a5 (ENSXETG00000009499) #20	nabp2 (ENSXETG00000024652) #21	rnf41 (ENSXETG00000009498) #22	smarcc2 (ENSXETG00000009486) #23	myl6 (ENSXETG00000024654) #25	esyt1 (ENSXETG00000009481) #26	zc3h10 (ENSXETG00000009476) #27	pa2g4 (ENSXETG00000009471) #29	erbb3 (ENSXETG00000009463) #30	rps26 (ENSXETG00000009458) ##31	ikzf4 (ENSXETG00000009449) #32	suox (ENSXETG00000009446) #33	rab5b (ENSXETG00000006194) #34	cdk2 (ENSXETG00000009444) #35	pmel (ENSXETG00000009439) #36	dgka (ENSXETG00000009437) #37	pan2 (ENSXETG00000009434) #14	gdf11.1 (ENSXETG00000021861)
Coelacanth	MODERN SPECIES	320	PRPH (ENSLACG00000015277)	ENSLACG00000015812	CD63 (ENSLACG00000015901)	RDH5 (ENSLACG00000016142)	BLOC1S1 (ENSLACG00000016210)	ITGA7 (ENSLACG00000016510)	ENSLACG00000016685	FKBP11 (ENSLACG00000016698)	CCDC65 (ENSLACG00000016720)	RND1 (ENSLACG00000016845)	DDX23 (ENSLACG00000016977)	CACNB3 (ENSLACG00000017043)	ADCY6 (ENSLACG00000017248)	TEX49 (ENSLACG00000022415)	CCNT1 (ENSLACG00000017559)	RNF41 (ENSLACG00000017605) #22	SMARCC2 (ENSLACG00000017661) #23	ENSLACG00000017747 ##25	ESYT1 (ENSLACG00000017835) #26	MARCHF9 (ENSLACG00000017934)	ENSLACG00000017970
Actinopterygii	ANCESTRAL SPECIES	410									ENSGT00940000154657.C	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144 #37
Reedfish	MODERN SPECIES	11	hoxc5a (ENSECRG00000008478)	hoxc4a (ENSECRG00000008487)	cbx5 (ENSECRG00000008493)	hnrnpa1b (ENSECRG00000008516)	nfe2 (ENSECRG00000008534)	copz1 (ENSECRG00000008611)	ENSECRG00000008789	cela1.3 (ENSECRG00000008817)	ENSECRG00000009102	cnpy2 (ENSECRG00000010340)	cs (ENSECRG00000010354) #16	COQ10A (ENSECRG00000010363) #17	ankrd52a (ENSECRG00000010381) #18	SLC39A5 (ENSECRG00000010422) #20	NABP2 (ENSECRG00000010439) #21	rnf41 (ENSECRG00000010446) #22	dgkaa (ENSECRG00000010457) #37	ENSECRG00000010480	gdf11 (ENSECRG00000010489)	ENSECRG00000010495	ENSECRG00000010499	kansl2 (ENSECRG00000010518)	NCKAP5L (ENSECRG00000010552)	TMBIM6 (ENSECRG00000010581)	fmnl3 (ENSECRG00000010600)	PRPF40B (ENSECRG00000010693)	ENSECRG00000010921	ENSECRG00000010938	FIGNL2 (ENSECRG00000010944)	scn8aa (ENSECRG00000010957)	ENSECRG00000010967
Neopterygii	ANCESTRAL SPECIES	71	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a	ENSGT00390000008169	ENSGT00940000154610.e.b	ENSGT00940000154657.C	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144 #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a	ENSGT00390000010523.d	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00390000006330.a.b	ENSGT00390000002174.a	ENSGT00940000155637	ENSGT00950000183178.a	ENSGT00390000013978.d #14	ENSGT00940000156785	ENSGT00940000161997.b	ENSGT00390000005536	ENSGT00390000001138.a
Spotted gar	MODERN SPECIES	670	CSRNP2 (ENSLOCG00000004834)	TFCP2 (ENSLOCG00000004816)	pou6f1 (ENSLOCG00000004801)	dazap2 (ENSLOCG00000004791)	ENSLOCG00000018196	bin2a (ENSLOCG00000004768)	ENSLOCG00000004747	racgap1 (ENSLOCG00000004720)	ENSLOCG00000004688	cnpy2 (ENSLOCG00000004671)	cs (ENSLOCG00000004655) #16	COQ10A (ENSLOCG00000004633) #17	ankrd52a (ENSLOCG00000004608) #18	SLC39A5 (ENSLOCG00000004591) #20	NABP2 (ENSLOCG00000004560) #21	rnf41 (ENSLOCG00000004550) #22	dgkaa (ENSLOCG00000004530) #37	tamalin (ENSLOCG00000004513)	nr4a1 (ENSLOCG00000004504)	rprm3 (ENSLOCG00000018194)	ENSLOCG00000004483	zgc:56699 (ENSLOCG00000004469)	letmd1 (ENSLOCG00000004454)	ENSLOCG00000004440	cd63 (ENSLOCG00000004424)	nab2 (ENSLOCG00000004409)	nemp1 (ENSLOCG00000004393)	ENSLOCG00000004370	ormdl2 (ENSLOCG00000004357)	PAN2 (ENSLOCG00000004333) #14	INPP1 (ENSLOCG00000004294)
Osteoglossocephalai	ANCESTRAL SPECIES	468														ENSGT00950000182908.B.c.a #18	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00940000157144.c.a #37
Clupeocephala	ANCESTRAL SPECIES	39														ENSGT00950000182908.B.c.a #18	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00390000005536	ENSGT00390000003749 #33	ENSGT00940000158593.a	ENSGT00390000016940.c.a.b	ENSGT00390000015124 #10	ENSGT00940000160203
Otomorpha	ANCESTRAL SPECIES	114														ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00390000005536	ENSGT00390000003749 #33
Otophysi	ANCESTRAL SPECIES	178														ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00940000156211.b	ENSGT00390000009842	ENSGT00390000012948.b	ENSGT00940000164771.b	ENSGT00390000013978.d #14	ENSGT01030000235094	ENSGT00950000183178.a	ENSGT00390000002174.a
Characiphysae	ANCESTRAL SPECIES	5	ENSGT00940000161154.b	ENSGT00950000183042.b.a	ENSGT00940000156977.f	ENSGT00940000159659.d.a.c	ENSGT00940000157172	ENSGT00390000017888	ENSGT00390000004915.b	ENSGT00950000183056.A.b	ENSGT00940000158351	ENSGT00940000159969.b.a.a	ENSGT00940000162690	ENSGT00940000162505.a	ENSGT00390000015191	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00390000005536	ENSGT00390000003749 #33
Channel catfish	MODERN SPECIES	6	ap4b1 (ENSIPUG00000013908)	BLTP3A (ENSIPUG00000013761)	taf11 (ENSIPUG00000013720)	ANKS1A (ENSIPUG00000013676)	CPNE9 (ENSIPUG00000012262)	cmtr1 (ENSIPUG00000012160)	ENSIPUG00000012148	fbxo25 (ENSIPUG00000012112)	FAM110C (ENSIPUG00000012094)	kti12 (ENSIPUG00000012087)	acp1 (ENSIPUG00000012037)	fam150b (ENSIPUG00000012004)	tmem18 (ENSIPUG00000011962)	ankrd52 (ENSIPUG00000011839) #18	slc39a5 (ENSIPUG00000011762) #20	rnf41 (ENSIPUG00000011715) #22	dgkaa (ENSIPUG00000011607) #37	tamalin (ENSIPUG00000011582)	nr4a1 (ENSIPUG00000011564)	rprm3 (ENSIPUG00000011547)	zgc:56699 (ENSIPUG00000011498)	letmd1 (ENSIPUG00000011472)	cd63 (ENSIPUG00000011407)	ENSIPUG00000011391	mylk2 (ENSIPUG00000011370)	tpx2 (ENSIPUG00000011232)	trappc6b (ENSIPUG00000011166)	plagx (ENSIPUG00000011159)	PAN2 (ENSIPUG00000011065) #14	ENSIPUG00000011048	ORMDL2 (ENSIPUG00000011026)
Characiphysae_b	ANCESTRAL SPECIES	77	ENSGT00940000161109.t	ENSGT00940000164454	ENSGT00940000161154.b	ENSGT00950000183042.b.a	ENSGT00940000156977.f	ENSGT00940000159659.d.a.c	ENSGT00940000157172	ENSGT00390000017888	ENSGT00390000004915.b	ENSGT00950000183056.A.b	ENSGT00940000158351	ENSGT00940000159969.b.a.a	ENSGT00390000015191	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00390000005536	ENSGT00390000003749 #33	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b.d	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b
Electric eel	MODERN SPECIES	555													tmem18 (ENSEEEG00000003529)	ankrd52a (ENSEEEG00000003530) #18	SLC39A5 (ENSEEEG00000003533) #20	rnf41 (ENSEEEG00000003540) #22	dgkaa (ENSEEEG00000003591) #37	tamalin (ENSEEEG00000004935)	nr4a1 (ENSEEEG00000004936)	ENSEEEG00000004941	zgc:56699 (ENSEEEG00000004943)	letmd1 (ENSEEEG00000004945)	cd63 (ENSEEEG00000004952)	ENSEEEG00000004955	tpx2 (ENSEEEG00000004957)	trappc6b (ENSEEEG00000004968)	plagx (ENSEEEG00000004985)	ENSEEEG00000004986	PAN2 (ENSEEEG00000004991) #14	ENSEEEG00000004995	ormdl2 (ENSEEEG00000004996)
Characoidei	ANCESTRAL SPECIES	38	ENSGT00940000161109.t	ENSGT00940000164454	ENSGT00940000161154.b	ENSGT00950000183042.b.a	ENSGT00940000156977.f	ENSGT00940000159659.d.a.c	ENSGT00940000157172	ENSGT00390000017888	ENSGT00390000004915.b	ENSGT00950000183056.A.b	ENSGT00940000158351	ENSGT00940000159969.b.a.a	ENSGT00390000015191	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00390000005536	ENSGT00390000003749 #33	ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b.d	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b	ENSGT00940000154457.a.b
Mexicana tetra	MODERN SPECIES	1099														ankrd52a (ENSAMXG00000041074) #18	SLC39A5 (ENSAMXG00000030438) #20	rnf41 (ENSAMXG00000005587) #22
Red-bellied piranha	MODERN SPECIES	5	ID1 (ENSPNAG00000029096)	ndnl2 (ENSPNAG00000005055)	ENSPNAG00000028954	ENSPNAG00000028942	klf15 (ENSPNAG00000028842)	CPNE9 (ENSPNAG00000028809)	cmtr1 (ENSPNAG00000028223)	ENSPNAG00000005103	fbxo25 (ENSPNAG00000028083)	ENSPNAG00000028004	ACP1 (ENSPNAG00000027982)	ENSPNAG00000027934	tmem18 (ENSPNAG00000004738)	ankrd52a (ENSPNAG00000004266) #18	SLC39A5 (ENSPNAG00000027714) #20	rnf41 (ENSPNAG00000027660) #22	ENSPNAG00000006151	dgkaa (ENSPNAG00000006017) #37	tamalin (ENSPNAG00000027581)	nr4a1 (ENSPNAG00000027571)	rprm3 (ENSPNAG00000027516)	zgc:56699 (ENSPNAG00000005165)	letmd1 (ENSPNAG00000027474)	cd63 (ENSPNAG00000027457)	ENSPNAG00000006376	ENSPNAG00000027416	tpx2 (ENSPNAG00000027395)	trappc6b (ENSPNAG00000027185)	plagx (ENSPNAG00000027155)	PAN2 (ENSPNAG00000027140) #14	ENSPNAG00000026947
Cyprinoidei	ANCESTRAL SPECIES		ENSGT00940000157629.m	ENSGT00950000183072.b.a	ENSGT00940000158061.a	ENSGT00940000159931	ENSGT00390000002307.e	ENSGT01050000244850.C.b.u.a.b	ENSGT00740000116987	ENSGT00390000003023	ENSGT01050000244850.C.b.u.a.a	ENSGT00390000008414.h	ENSGT00940000154285.a.b.a.a.b	ENSGT00390000001017	ENSGT00390000017567	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00390000010523.d	ENSGT00940000164745.i.a	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00940000156211.b	ENSGT00390000009842	ENSGT00390000012948.b	ENSGT00940000164771.b	ENSGT00390000013978.d #14	ENSGT01030000235094	ENSGT00950000183178.a	ENSGT00390000002174.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	76	ENSGT00950000182882.A.a.i.b.b	ENSGT00610000087489.d	ENSGT00390000000685.cb	ENSGT00940000160106.n	ENSGT00940000157629.m.a	ENSGT00950000183072.b.a.b	ENSGT00940000158061.a.c	ENSGT00940000159931.d	ENSGT00390000002307.e.d	ENSGT00740000116987.b	ENSGT01050000244850.C.b.u.a.a.a.b	ENSGT00390000008414.h.a	ENSGT00390000017567.p	ENSGT00950000182908.B.c.b.j #18	ENSGT00940000161155.l #20	ENSGT00530000063647.B.a #22	ENSGT00940000157144.c.b.a #37	ENSGT00530000063734.b.e	ENSGT00950000183038.a.b.a.h.c	ENSGT00390000010523.d.a	ENSGT00940000164745.i.a.b	ENSGT00950000183167.a.b.b.b.e	ENSGT00940000156832.eb	ENSGT00940000156211.b.g	ENSGT00390000009842.g	ENSGT00390000012948.b.x	ENSGT00940000164771.b.d	ENSGT00390000013978.d.b #14	ENSGT01030000235094.b	ENSGT00950000183178.a.x	ENSGT00390000002174.a.g
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	42	ENSCARG00000029539	ENSCARG00000029550	AP1S2 (ENSCARG00000029579)	CDKL5 (ENSCARG00000029615)	ENSCARG00000029642	RAI2 (ENSCARG00000029676)	ENSCARG00000029679	rnf150b (ENSCARG00000054852)	anapc10 (ENSCARG00000054883)	E2F1 (ENSCARG00000054893)	znf341 (ENSCARG00000054901)	itchb (ENSCARG00000054991)	ENSCARG00000056878	slc10a7 (ENSCARG00000056886)	SLC39A5 (ENSCARG00000056899) #20	rnf41 (ENSCARG00000056938) #22	hnf4a (ENSCARG00000056959)	ttpal (ENSCARG00000057050)	pkig (ENSCARG00000057063)	ada (ENSCARG00000057081)	ube4b (ENSCARG00000057511)	kif1b (ENSCARG00000057700)	tnfrsf9a (ENSCARG00000057710)	LRP1 (ENSCARG00000057874)	fmnl3 (ENSCARG00000062785)	ESYT1 (ENSCARG00000066335) ##26	pa2g4b (ENSCARG00000066965)	erbb3b (ENSCARG00000067099) #30	ENSCARG00000067401	CACNB3 (ENSCARG00000067429)	rnd1b (ENSCARG00000067459)
Goldfish	MODERN SPECIES	42	mical1 (ENSCARG00000058346)	src (ENSCARG00000058166)	kcng1 (ENSCARG00000058128)	uts2a (ENSCARG00000058102)	ENSCARG00000058047	tnfrsf9a (ENSCARG00000058025)	DVL1 (ENSCARG00000057998)	mxra8b (ENSCARG00000057921)	aurkaip1 (ENSCARG00000057906)	slc25a33 (ENSCARG00000057818)	tmem201 (ENSCARG00000057780)	foxl2l (ENSCARG00000057762)	pik3cd (ENSCARG00000055914)	ctnnbip1 (ENSCARG00000055807)	ENSCARG00000055725 #20	rnf41 (ENSCARG00000055688) #22	dgkaa (ENSCARG00000055155) #37	tamalin (ENSCARG00000055056)	nr4a1 (ENSCARG00000055024)	rprm3 (ENSCARG00000055017)	zgc:56699 (ENSCARG00000054983)	letmd1 (ENSCARG00000054891)	cd63 (ENSCARG00000054869)	ENSCARG00000068882	tpx2 (ENSCARG00000068742)	trappc6b (ENSCARG00000068710)	plagx (ENSCARG00000068701)	ENSCARG00000068693	PAN2 (ENSCARG00000068630) #14	ormdl2 (ENSCARG00000068601)	nemp1 (ENSCARG00000068541)
Cyprininae_a	ANCESTRAL SPECIES	17	ENSGT00610000087489.d	ENSGT00390000000685.cb	ENSGT00940000160106.n	ENSGT00940000157629.m.a	ENSGT00950000183072.b.a.b	ENSGT00940000158061.a.c	ENSGT00940000159931.d	ENSGT00390000002307.e.d	ENSGT00740000116987.b	ENSGT01050000244850.C.b.u.a.a.a.b	ENSGT01050000244850.C.b.u.a.a.a.a	ENSGT00390000008414.h.a	ENSGT00390000017567.p	ENSGT00950000182908.B.c.b.j #18	ENSGT00940000161155.l #20	ENSGT00530000063647.B.a #22	ENSGT00940000157144.c.b.a #37	ENSGT00530000063734.b.e	ENSGT00950000183038.a.b.a.h.c	ENSGT00390000010523.d.a	ENSGT00940000164745.i.a.b	ENSGT00950000183167.a.b.b.b.e	ENSGT00940000156832.eb	ENSGT00940000156211.b.g	ENSGT00390000009842.g	ENSGT01030000235094.b	ENSGT00390000012948.b.x	ENSGT00940000164771.b.d	ENSGT00390000013978.d.b #14	ENSGT00950000183178.a.x	ENSGT00390000002174.a.g
Common carp reference	MODERN SPECIES	11	bin2a (ENSCCRG00000014312)	ENSCCRG00000074660	dazap2 (ENSCCRG00000023458)	pou6f1 (ENSCCRG00000060837)	TFCP2 (ENSCCRG00000068172)	CSRNP2 (ENSCCRG00000061112)	itga5 (ENSCCRG00000008852)	slc48a1a (ENSCCRG00000081921)	si:ch211-226m16.2 (ENSCCRG00000075898)	ENSCCRG00000009222	ENSCCRG00000005322	ENSCCRG00000031138	taf8 (ENSCCRG00000013799)	ankrd52a (ENSCCRG00000049854) #18	SLC39A5 (ENSCCRG00000049849) #20	rnf41 (ENSCCRG00000032730) #22	dgkaa (ENSCCRG00000029356) #37	tamalin (ENSCCRG00000077410)	nr4a1 (ENSCCRG00000019524)	rprm3 (ENSCCRG00000023027)	zgc:56699 (ENSCCRG00000023029)	letmd1 (ENSCCRG00000055988)	cd63 (ENSCCRG00000023011)	ENSCCRG00000008569	tpx2 (ENSCCRG00000019464)	plagx (ENSCCRG00000058007)	trappc6b (ENSCCRG00000019460)	ENSCCRG00000019422 #14	ENSCCRG00000019415	ormdl2 (ENSCCRG00000019412)	nemp1 (ENSCCRG00000019198)
Golden-line barbel	MODERN SPECIES	360										PLXNA2 (ENSSGRG00000019275)	ENSSGRG00000021006	ENSSGRG00000021007	taf8 (ENSSGRG00000021009)	ankrd52a (ENSSGRG00000021114) #18	SLC39A5 (ENSSGRG00000023583) #20	rnf41 (ENSSGRG00000023584) #22	dgkaa (ENSSGRG00000023591) #37	tamalin (ENSSGRG00000023886)	nr4a1 (ENSSGRG00000023891)	rprm3 (ENSSGRG00000023893)	zgc:56699 (ENSSGRG00000023895)	letmd1 (ENSSGRG00000023902)	cd63 (ENSSGRG00000023961)	ENSSGRG00000023962	tpx2 (ENSSGRG00000023970)	trappc6b (ENSSGRG00000023989)	plagx (ENSSGRG00000023997)	PAN2 (ENSSGRG00000024005) #14	ormdl2 (ENSSGRG00000024627)	nemp1 (ENSSGRG00000024648)	armc1l (ENSSGRG00000024651)
Cyprininae	ANCESTRAL SPECIES	3	ENSGT00940000157629.m.b	ENSGT00950000183072.b.a.a	ENSGT00940000158061.a.d	ENSGT00940000159931.c	ENSGT00390000002307.e.c	ENSGT01050000244850.C.b.u.a.b	ENSGT00740000116987.a	ENSGT01050000244850.C.b.u.a.a.b	ENSGT00390000008414.h.b	ENSGT00940000154285.a.b.a.a.b.c.b	ENSGT00940000154285.a.b.a.a.b.c.a.b	ENSGT00390000001017	ENSGT00390000017567.o	ENSGT00950000182908.B.c.b.i #18	ENSGT00940000161155.k #20	ENSGT00530000063647.B.b #22	ENSGT00940000157144.c.b.b #37	ENSGT00530000063734.b.f	ENSGT00950000183038.a.b.a.h.d	ENSGT00390000010523.d.b	ENSGT00940000164745.i.a.a	ENSGT00950000183167.a.b.b.b.f	ENSGT00940000156832.db	ENSGT00940000156211.b.h	ENSGT00390000009842.h	ENSGT00390000012948.b.w	ENSGT00940000164771.b.c	ENSGT00390000013978.d.a #14	ENSGT01030000235094.a	ENSGT00950000183178.a.w	ENSGT00390000002174.a.h
Goldfish	MODERN SPECIES	15	slc1a7b (ENSCARG00000005763)	PODN (ENSCARG00000005786)	scp2b (ENSCARG00000005793)	DLGAP4 (ENSCARG00000005805)	myl9a (ENSCARG00000005821)	itchb (ENSCARG00000005898)	E2F1 (ENSCARG00000006396)	ENSCARG00000006433	ENSCARG00000006459	ENSCARG00000006494	ENSCARG00000006608	ENSCARG00000006661	taf8 (ENSCARG00000006668)	ankrd52a (ENSCARG00000006760) #18	SLC39A5 (ENSCARG00000008096) #20	rnf41 (ENSCARG00000008147) #22	dgkaa (ENSCARG00000008270) #37	tamalin (ENSCARG00000009808)	nr4a1 (ENSCARG00000009815)	rprm3 (ENSCARG00000009820)	zgc:56699 (ENSCARG00000009829)	letmd1 (ENSCARG00000009842)	cd63 (ENSCARG00000009857)	tpx2 (ENSCARG00000009879)	trappc6b (ENSCARG00000010316)	plagx (ENSCARG00000010322)	PAN2 (ENSCARG00000010332) #14	ENSCARG00000010373	ormdl2 (ENSCARG00000010377)	nemp1 (ENSCARG00000010393)	ENSCARG00000010405
Cyprininae_a	ANCESTRAL SPECIES	5	ENSGT00940000160106.m	ENSGT00940000157629.m.b	ENSGT00950000183072.b.a.a	ENSGT00940000158061.a.d	ENSGT00940000159931.c	ENSGT00390000002307.e.c.a	ENSGT00740000116987.a	ENSGT01050000244850.C.b.u.a.a.b	ENSGT00390000008414.h.b	ENSGT00940000154285.a.b.a.a.b.c.b	ENSGT00940000154285.a.b.a.a.b.c.a.b	ENSGT00390000001017	ENSGT00390000017567.o	ENSGT00950000182908.B.c.b.i #18	ENSGT00940000161155.k #20	ENSGT00530000063647.B.b #22	ENSGT00940000157144.c.b.b #37	ENSGT00530000063734.b.f	ENSGT00950000183038.a.b.a.h.d	ENSGT00390000010523.d.b	ENSGT00940000164745.i.a.a	ENSGT00950000183167.a.b.b.b.f	ENSGT00940000156832.db	ENSGT00940000156211.b.h	ENSGT00390000009842.h	ENSGT00390000012948.b.w	ENSGT00940000164771.b.c	ENSGT00390000013978.d.a #14	ENSGT01030000235094.a	ENSGT00950000183178.a.w	ENSGT00390000002174.a.h
Common carp reference	MODERN SPECIES	49	CSRNP2 (ENSCCRG00000053001)	itga5 (ENSCCRG00000036566)	ENSCCRG00000056286	slc48a1a (ENSCCRG00000067707)	si:ch211-226m16.2 (ENSCCRG00000069439)	ENSCCRG00000081457	ENSCCRG00000073977	ENSCCRG00000059800	ENSCCRG00000074170	ENSCCRG00000031125	ENSCCRG00000001471	ENSCCRG00000001550	taf8 (ENSCCRG00000001574)	ankrd52a (ENSCCRG00000076288) #18	SLC39A5 (ENSCCRG00000032722) #20	rnf41 (ENSCCRG00000081174) #22	dgkaa (ENSCCRG00000080728) #37	tamalin (ENSCCRG00000019495)	nr4a1 (ENSCCRG00000019489)	zgc:56699 (ENSCCRG00000019480)	rprm3 (ENSCCRG00000057742)	letmd1 (ENSCCRG00000023032)	cd63 (ENSCCRG00000019474)	tpx2 (ENSCCRG00000027717)	trappc6b (ENSCCRG00000008539)	plagx (ENSCCRG00000019459)	ENSCCRG00000007443 #14	ENSCCRG00000022210	ormdl2 (ENSCCRG00000057516)	nemp1 (ENSCCRG00000022217)	ENSCCRG00000020586
Golden-line barbel	MODERN SPECIES	177	ENSSGRG00000022427	dazap2 (ENSSGRG00000022428)	pou6f1 (ENSSGRG00000022429)	TFCP2 (ENSSGRG00000022436)	CSRNP2 (ENSSGRG00000022828)	itga5 (ENSSGRG00000022835)	RAPGEF3 (ENSSGRG00000023023)	slc48a1a (ENSSGRG00000023025)	PLXNA2 (ENSSGRG00000023079)	ENSSGRG00000023473	ENSSGRG00000023474	ENSSGRG00000023475	taf8 (ENSSGRG00000023482)	ankrd52a (ENSSGRG00000023497) #18	SLC39A5 (ENSSGRG00000024130) #20	rnf41 (ENSSGRG00000024133) #22	dgkaa (ENSSGRG00000024196) #37	tamalin (ENSSGRG00000026179)
Zebrafish	MODERN SPECIES	15	TFCP2 (ENSDARG00000060306)	CSRNP2 (ENSDARG00000075972)	itga5 (ENSDARG00000006353)	ENSDARG00000079291	slc48a1a (ENSDARG00000026907)	si:ch211-226m16.2 (ENSDARG00000036785)	ENSDARG00000026864	PLXNA2 (ENSDARG00000060372)	ENSDARG00000095268	ENSDARG00000109390	ENSDARG00000097446	ENSDARG00000097071	taf8 (ENSDARG00000026806)	ankrd52a (ENSDARG00000036826) #18	SLC39A5 (ENSDARG00000079525) #20	rnf41 (ENSDARG00000036831) #22	dgkaa (ENSDARG00000060626) #37	tamalin (ENSDARG00000000588)	nr4a1 (ENSDARG00000000796)	rprm3 (ENSDARG00000092792)	zgc:56699 (ENSDARG00000000887)	letmd1 (ENSDARG00000030641)	cd63 (ENSDARG00000025147)	mylk2 (ENSDARG00000031698)	tpx2 (ENSDARG00000078654)	trappc6b (ENSDARG00000016463)	plagx (ENSDARG00000036855)	PAN2 (ENSDARG00000074675) #14	ENSDARG00000103255	ormdl2 (ENSDARG00000058022)	nemp1 (ENSDARG00000073899)
Clupeiformes	ANCESTRAL SPECIES	606															ENSGT00940000161155 #20	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h
Denticle herring	MODERN SPECIES	1	ENSDCDG00000016418	olfml3a (ENSDCDG00000016462)	c1qtnf12 (ENSDCDG00000016466)	sdf4 (ENSDCDG00000016471)	ENSDCDG00000016483	kansl2 (ENSDCDG00000016488)	ENSDCDG00000016514	ENSDCDG00000016519	ccnt1 (ENSDCDG00000016523)	ccnt1 (ENSDCDG00000016528)	itpr3 (ENSDCDG00000016739)	GPR37L1 (ENSDCDG00000026347)	RAB29 (ENSDCDG00000026349)	cry3a (ENSDCDG00000026397)	ENSDCDG00000026931 #20	rnf41 (ENSDCDG00000026935) #22	dgkaa (ENSDCDG00000027003) #37	ENSDCDG00000029682	ENSDCDG00000029687	ccnt1 (ENSDCDG00000029690)	ccnt1 (ENSDCDG00000029695)	itpr3 (ENSDCDG00000029713)	RAB29 (ENSDCDG00000029762)	ENSDCDG00000029763 #20	tamalin (ENSDCDG00000029765)	nr4a1 (ENSDCDG00000029767)	letmd1 (ENSDCDG00000029777)	zgc:56699 (ENSDCDG00000029780)	cd63 (ENSDCDG00000029781)	ENSDCDG00000029787	EMC1 (ENSDCDG00000029806)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	21	oxtrb (ENSCHAG00000025141)	ptgis (ENSCHAG00000025145)	KCNB1 (ENSCHAG00000025157)	ENSCHAG00000025160	ENSCHAG00000025165	stau1 (ENSCHAG00000025191)	cyc1 (ENSCHAG00000025227)	raly (ENSCHAG00000025255)	eif2s2 (ENSCHAG00000025262)	asip1 (ENSCHAG00000025275)	COQ10A (ENSCHAG00000025283) #17	ANKRD52 (ENSCHAG00000025372) #18	snrpc (ENSCHAG00000026173)	SPDEF (ENSCHAG00000026175)	ENSCHAG00000026178	RNF41 (ENSCHAG00000026182) #22	DGKA (ENSCHAG00000026204) #37	NR4A1 (ENSCHAG00000026446)	RACGAP1 (ENSCHAG00000026454)	FNDC11 (ENSCHAG00000026481)	ENSCHAG00000026484	SERINC3 (ENSCHAG00000026490)	tp53rk (ENSCHAG00000026511)	LSM3 (ENSCHAG00000026512)	zgc:171566 (ENSCHAG00000026515)	gls2b (ENSCHAG00000026521) #7	ENSCHAG00000026534	ENSCHAG00000026579	ENSCHAG00000000209	ENSCHAG00000000678	ENSCHAG00000001209
Atlantic herring	MODERN SPECIES	20	cdk11b (ENSCHAG00000023890)	olfml3a (ENSCHAG00000024220)	rprd1b (ENSCHAG00000024227)	TTI1 (ENSCHAG00000024237)	ctnnbl1 (ENSCHAG00000024246)	ENSCHAG00000024353	znf341 (ENSCHAG00000024373)	ENSCHAG00000024482	ENSCHAG00000024485	ENSCHAG00000024487	kansl2 (ENSCHAG00000024492)	ENSCHAG00000024509	ENSCHAG00000024513	mib2 (ENSCHAG00000024553)	sdf4 (ENSCHAG00000024948)	rnf41 (ENSCHAG00000024985) #22	GPR37L1 (ENSCHAG00000024992)	itpr3 (ENSCHAG00000025018)	ENSCHAG00000025214	ENSCHAG00000025216	ENSCHAG00000025220	ENSCHAG00000025222	ENSCHAG00000025226	ENSCHAG00000025228	letmd1 (ENSCHAG00000025232)	CRELD1 (ENSCHAG00000025246)	stac3 (ENSCHAG00000025271)	tamalin (ENSCHAG00000025287)	BRPF1 (ENSCHAG00000025294)	ENSCHAG00000025308	ENSCHAG00000025310
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00940000164642	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT01030000235094	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Acanthomorphata	ANCESTRAL SPECIES	3	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Tiger tail seahorse	MODERN SPECIES	28	cd40 (ENSHCOG00000008241)	cbln4 (ENSHCOG00000008346)	ENSHCOG00000008363	PFDN4 (ENSHCOG00000008371)	znf217 (ENSHCOG00000000278)	ENSHCOG00000008378	TSHZ2 (ENSHCOG00000008381)	ZFP64 (ENSHCOG00000008398)	ENSHCOG00000008502	sall4 (ENSHCOG00000008519)	ATP9A (ENSHCOG00000008564)	NFATC2 (ENSHCOG00000008692)	kcng1 (ENSHCOG00000008708)	src (ENSHCOG00000008735)	ankrd52a (ENSHCOG00000008791) #18	rnf41 (ENSHCOG00000008814) #22	dgkaa (ENSHCOG00000008875) #37	tamalin (ENSHCOG00000008893)	TUBA1A (ENSHCOG00000008897)	tuba1c (ENSHCOG00000008907)	pmelb (ENSHCOG00000008954) #36	COQ10A (ENSHCOG00000008977) #17	cs (ENSHCOG00000008996) #16	ENSHCOG00000009051	racgap1 (ENSHCOG00000009119)	ENSHCOG00000009139	bin2a (ENSHCOG00000009326)	ENSHCOG00000009350	dazap2 (ENSHCOG00000009369)	pou6f1 (ENSHCOG00000009414)
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Oryzias	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745.h	ENSGT00940000164745.g	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745.h	ENSGT00940000164745.g	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879.c	ENSGT00940000176879.d	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b
Indian medaka	MODERN SPECIES	23	CSRNP2 (ENSOMEG00000021086)	TFCP2 (ENSOMEG00000021124)	pou6f1 (ENSOMEG00000000686)	dazap2 (ENSOMEG00000000937)	ENSOMEG00000021206	bin2a (ENSOMEG00000021235)	ENSOMEG00000021256	racgap1 (ENSOMEG00000021270)	ENSOMEG00000021290	cs (ENSOMEG00000021307) #16	ENSOMEG00000021315	COQ10A (ENSOMEG00000021332) #17	ankrd52a (ENSOMEG00000021358) #18	ENSOMEG00000021388	ankrd52a (ENSOMEG00000021424) #18	rnf41 (ENSOMEG00000021453) #22	dgkaa (ENSOMEG00000021631) #37	tamalin (ENSOMEG00000021697)	nr4a1 (ENSOMEG00000021720)	ENSOMEG00000021739	ENSOMEG00000021773	letmd1 (ENSOMEG00000021816)	cd63 (ENSOMEG00000021869)	nemp1 (ENSOMEG00000021892)	ORMDL2 (ENSOMEG00000021904)	ENSOMEG00000021929	ENSOMEG00000000578	PAN2 (ENSOMEG00000022087) #14	ENSOMEG00000022204	pym1 (ENSOMEG00000022250)	MMP19 (ENSOMEG00000022290)
Javanese ricefish	MODERN SPECIES	21	slc48a1a (ENSOJAG00000003165)	RAPGEF3 (ENSOJAG00000002764)	itga5 (ENSOJAG00000002281)	CSRNP2 (ENSOJAG00000002209)	TFCP2 (ENSOJAG00000001962)	pou6f1 (ENSOJAG00000001857)	dazap2 (ENSOJAG00000001843)	ENSOJAG00000001832	ENSOJAG00000001817	racgap1 (ENSOJAG00000001792)	ENSOJAG00000001777	ENSOJAG00000001756	cs (ENSOJAG00000001669) #16	COQ10A (ENSOJAG00000001641) #17	ankrd52a (ENSOJAG00000001350) #18	rnf41 (ENSOJAG00000001292) #22	dgkaa (ENSOJAG00000000809) #37	tamalin (ENSOJAG00000000602)	nr4a1 (ENSOJAG00000000595)	ENSOJAG00000000586	ENSOJAG00000000581	letmd1 (ENSOJAG00000000561)	cd63 (ENSOJAG00000000552)	nemp1 (ENSOJAG00000000537)	ormdl2 (ENSOJAG00000000514)	ENSOJAG00000000508	ENSOJAG00000000500	PAN2 (ENSOJAG00000000429) #14	ENSOJAG00000000343	pym1 (ENSOJAG00000000340)	ENSOJAG00000000327
Oryzias_a	ANCESTRAL SPECIES		ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745.h	ENSGT00940000164745.g	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879.a	ENSGT00940000176879.b	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b
Japanese Medaka HdrR	MODERN SPECIES	21	slc48a1a (ENSORLG00000026959)	RAPGEF3 (ENSORLG00000015678)	itga5 (ENSORLG00000015664)	CSRNP2 (ENSORLG00000028065)	TFCP2 (ENSORLG00000015644)	pou6f1 (ENSORLG00000015567)	dazap2 (ENSORLG00000015553)	ENSORLG00000024553	bin2a (ENSORLG00000015549)	ENSORLG00000024430	racgap1 (ENSORLG00000015540)	ENSORLG00000015514	cs (ENSORLG00000015465) #16	COQ10A (ENSORLG00000015446) #17	ankrd52a (ENSORLG00000015438) #18	rnf41 (ENSORLG00000015408) #22	dgkaa (ENSORLG00000015390) #37	tamalin (ENSORLG00000015291)	nr4a1 (ENSORLG00000015279)	ENSORLG00000015258	ENSORLG00000025877	letmd1 (ENSORLG00000015248)	cd63 (ENSORLG00000015237)	nemp1 (ENSORLG00000015214)	ENSORLG00000015205	ENSORLG00000025974	ENSORLG00000026467	PAN2 (ENSORLG00000015195) #14	ENSORLG00000015146	pym1 (ENSORLG00000030592)	ENSORLG00000015127
Chinese medaka	MODERN SPECIES	38	ENSOSIG00000007477	slc48a1a (ENSOSIG00000007475)	RAPGEF3 (ENSOSIG00000004018)	itga5 (ENSOSIG00000001110)	CSRNP2 (ENSOSIG00000001079)	TFCP2 (ENSOSIG00000000161)	pou6f1 (ENSOSIG00000023349)	dazap2 (ENSOSIG00000023346)	ENSOSIG00000023336	ENSOSIG00000023334	racgap1 (ENSOSIG00000023322)	ENSOSIG00000023313	cs (ENSOSIG00000023304) #16	COQ10A (ENSOSIG00000023293) #17	ankrd52a (ENSOSIG00000023214) #18	rnf41 (ENSOSIG00000023181) #22	dgkaa (ENSOSIG00000022814) #37	tamalin (ENSOSIG00000022671)	nr4a1 (ENSOSIG00000022666)	letmd1 (ENSOSIG00000022659)	nemp1 (ENSOSIG00000022653)	ORMDL2 (ENSOSIG00000022646)	ENSOSIG00000022634	ENSOSIG00000022632	PAN2 (ENSOSIG00000022623) #14	ENSOSIG00000022614	pym1 (ENSOSIG00000022610)	MMP19 (ENSOSIG00000022609)	ENSOSIG00000022608	ENSOSIG00000022607	ocstamp (ENSOSIG00000022604)
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Aplocheiloidei	ANCESTRAL SPECIES	41	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Mangrove rivulus	MODERN SPECIES	46	slc48a1a (ENSKMAG00000005152)	RAPGEF3 (ENSKMAG00000005181)	itga5 (ENSKMAG00000005252)	CSRNP2 (ENSKMAG00000005382)	TFCP2 (ENSKMAG00000005418)	pou6f1 (ENSKMAG00000005477)	dazap2 (ENSKMAG00000005498)	ENSKMAG00000005516	bin2a (ENSKMAG00000005543)	ENSKMAG00000005586	racgap1 (ENSKMAG00000005621)	ENSKMAG00000005687	cs (ENSKMAG00000005719) #16	COQ10A (ENSKMAG00000005748) #17	ankrd52a (ENSKMAG00000005804) #18	rnf41 (ENSKMAG00000005959) #22	dgkaa (ENSKMAG00000005986) #37	tamalin (ENSKMAG00000006007)	nr4a1 (ENSKMAG00000006019)	ENSKMAG00000006038	letmd1 (ENSKMAG00000006053)	cd63 (ENSKMAG00000006079)	nemp1 (ENSKMAG00000006118)	ormdl2 (ENSKMAG00000006142)	ENSKMAG00000006163	PAN2 (ENSKMAG00000006192) #14	ENSKMAG00000006330	pym1 (ENSKMAG00000006351)	MMP19 (ENSKMAG00000006376)	ENSKMAG00000006388
Turquoise killifish	MODERN SPECIES	1624	RAPGEF3 (ENSNFUG00015010854)	ITGA5 (ENSNFUG00015011734)	ENSNFUG00015013120	CSRNP2 (ENSNFUG00015013124)	TFCP2 (ENSNFUG00015013187)	POU6F1 (ENSNFUG00015014480)	dazap2 (ENSNFUG00015014496)	ENSNFUG00015014527	bin2a (ENSNFUG00015014536)	OLA.5441 (ENSNFUG00015014587)	racgap1 (ENSNFUG00015014612)	Nfu_g_1_001902 (ENSNFUG00015014861)	CS (ENSNFUG00015015122) #16	COQ10A (ENSNFUG00015015530) #17	ANKRD52A (ENSNFUG00015015891) #18	RNF41 (ENSNFUG00015017333) #22	DGKAA (ENSNFUG00015017456) #37	tamalin (ENSNFUG00015019801)	NR4A1 (ENSNFUG00015019814)	GTSF1 (ENSNFUG00015019816)	LETMD1 (ENSNFUG00015019818)	CD63 (ENSNFUG00015019836)	ENSNFUG00015019843	lima1a (ENSNFUG00015019847)	spryd3 (ENSNFUG00015019856)	IGFBP6B (ENSNFUG00015019861)	ENSNFUG00015019874	ANKS1A (ENSNFUG00015019927)	SLC16A1 (ENSNFUG00015019993)	AVPR2 (ENSNFUG00015020000)	FAM120C (ENSNFUG00015020036)
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Poecilia	ANCESTRAL SPECIES	14	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
NAME_6	ANCESTRAL SPECIES	23	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b.e	ENSGT00950000182882.A.a.i.b.f	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Sailfin molly	MODERN SPECIES	773										cldni (ENSPLAG00000023393)	cldni (ENSPLAG00000000643)	ppp1caa (ENSPLAG00000023407)	ENSPLAG00000023412	COQ10A (ENSPLAG00000023442) #17	ankrd52a (ENSPLAG00000023577) #18	rnf41 (ENSPLAG00000023613) #22	dgkaa (ENSPLAG00000023697) #37	tamalin (ENSPLAG00000023706)
Amazon molly	MODERN SPECIES	308	RAPGEF3 (ENSPFOG00000012419)	itga5 (ENSPFOG00000011898)	CSRNP2 (ENSPFOG00000011846)	TFCP2 (ENSPFOG00000011621)	pou6f1 (ENSPFOG00000011559)	dazap2 (ENSPFOG00000011537)	ENSPFOG00000020955	bin2a (ENSPFOG00000011478)	bin2a (ENSPFOG00000011473)	ENSPFOG00000011450	racgap1 (ENSPFOG00000011267)	ENSPFOG00000010936	cs (ENSPFOG00000010861) #16	COQ10A (ENSPFOG00000010823) #17	ankrd52a (ENSPFOG00000010089) #18	rnf41 (ENSPFOG00000009952) #22	dgkaa (ENSPFOG00000009321) #37	tamalin (ENSPFOG00000009269)	nr4a1 (ENSPFOG00000009208)	zgc:56699 (ENSPFOG00000009204)	letmd1 (ENSPFOG00000009120)	cd63 (ENSPFOG00000009069)	nemp1 (ENSPFOG00000008991)	ormdl2 (ENSPFOG00000008951)	PAN2 (ENSPFOG00000008392) #14	ENSPFOG00000008232	pym1 (ENSPFOG00000008193)	MMP19 (ENSPFOG00000008044)	ENSPFOG00000007989	ENSPFOG00000007979	ENSPFOG00000007928
Guppy	MODERN SPECIES	459	slc48a1a (ENSPREG00000022467)	RAPGEF3 (ENSPREG00000022473)	itga5 (ENSPREG00000022500)	CSRNP2 (ENSPREG00000022508)	TFCP2 (ENSPREG00000022517)	pou6f1 (ENSPREG00000022538)	dazap2 (ENSPREG00000022545)	ENSPREG00000022549	bin2a (ENSPREG00000022555)	ENSPREG00000022563	racgap1 (ENSPREG00000022567)	ENSPREG00000022579	cs (ENSPREG00000022588) #16	COQ10A (ENSPREG00000022599) #17	ankrd52a (ENSPREG00000022607) #18	rnf41 (ENSPREG00000022626) #22	dgkaa (ENSPREG00000000586) #37	tamalin (ENSPREG00000000685)	nr4a1 (ENSPREG00000000694)	zgc:56699 (ENSPREG00000000745)	letmd1 (ENSPREG00000000777)	ENSPREG00000000823	nemp1 (ENSPREG00000000854)	ormdl2 (ENSPREG00000000868)	ENSPREG00000000888	PAN2 (ENSPREG00000000900) #14	ENSPREG00000000952	MMP19 (ENSPREG00000000962)	ENSPREG00000000970	ENSPREG00000000974	ENSPREG00000000993
Platyfish	MODERN SPECIES		slc48a1a (ENSXMAG00000025011)	RAPGEF3 (ENSXMAG00000012088)	itga5 (ENSXMAG00000012016)	CSRNP2 (ENSXMAG00000012012)	TFCP2 (ENSXMAG00000005202)	pou6f1 (ENSXMAG00000005195)	dazap2 (ENSXMAG00000005189)	ENSXMAG00000019666	bin2a (ENSXMAG00000012005)	ENSXMAG00000023943	racgap1 (ENSXMAG00000011965)	ENSXMAG00000011867	cs (ENSXMAG00000026722) #16	COQ10A (ENSXMAG00000011840) #17	ankrd52a (ENSXMAG00000011801) #18	rnf41 (ENSXMAG00000011797) #22	dgkaa (ENSXMAG00000011725) #37	tamalin (ENSXMAG00000011711)	nr4a1 (ENSXMAG00000011694)	zgc:56699 (ENSXMAG00000011692)	letmd1 (ENSXMAG00000011684)	cd63 (ENSXMAG00000011682)	nemp1 (ENSXMAG00000011679)	ormdl2 (ENSXMAG00000011676)	ENSXMAG00000029726	PAN2 (ENSXMAG00000011661) #14	ENSXMAG00000011651	pym1 (ENSXMAG00000011649)	MMP19 (ENSXMAG00000011637)	ENSXMAG00000011635	ENSXMAG00000011634
NAME_4	ANCESTRAL SPECIES	21	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Mummichog	MODERN SPECIES	2349	slc48a1a (ENSFHEG00000006876)	RAPGEF3 (ENSFHEG00000006857)	itga5 (ENSFHEG00000006824)	CSRNP2 (ENSFHEG00000006794)	TFCP2 (ENSFHEG00000006767)	pou6f1 (ENSFHEG00000006665)	dazap2 (ENSFHEG00000006647)	ENSFHEG00000006636	bin2a (ENSFHEG00000006623)	ENSFHEG00000006607	racgap1 (ENSFHEG00000006564)	ENSFHEG00000006473	cs (ENSFHEG00000006402) #16	COQ10A (ENSFHEG00000006193) #17	ankrd52a (ENSFHEG00000006164) #18	rnf41 (ENSFHEG00000006084) #22	dgkaa (ENSFHEG00000006071) #37	tamalin (ENSFHEG00000006049)	nr4a1 (ENSFHEG00000006045)	zgc:56699 (ENSFHEG00000006036)	letmd1 (ENSFHEG00000006010)	cd63 (ENSFHEG00000005997)	nemp1 (ENSFHEG00000005988)	ormdl2 (ENSFHEG00000005980)	ENSFHEG00000005969	PAN2 (ENSFHEG00000000157) #14	ENSFHEG00000005894	pym1 (ENSFHEG00000005884)	MMP19 (ENSFHEG00000005869)	ENSFHEG00000005851	ENSFHEG00000005846
Sheepshead minnow	MODERN SPECIES	340							dazap2 (ENSCVAG00000009485)	ENSCVAG00000009491	bin2a (ENSCVAG00000009547)	ENSCVAG00000009569	racgap1 (ENSCVAG00000009616)	ENSCVAG00000009685	cs (ENSCVAG00000009709) #16	COQ10A (ENSCVAG00000009734) #17	ankrd52a (ENSCVAG00000009797) #18	rnf41 (ENSCVAG00000009839) #22	dgkaa (ENSCVAG00000009883) #37	tamalin (ENSCVAG00000009941)	nr4a1 (ENSCVAG00000009953)	zgc:56699 (ENSCVAG00000009972)	letmd1 (ENSCVAG00000009979)	cd63 (ENSCVAG00000009996)	nemp1 (ENSCVAG00000010008)	ormdl2 (ENSCVAG00000010022)	ENSCVAG00000010033	PAN2 (ENSCVAG00000010197) #14	ENSCVAG00000010208	ENSCVAG00000010209	hsd17b10 (ENSCVAG00000010226)	FAM120C (ENSCVAG00000010237)	AVPR2 (ENSCVAG00000010460)
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745.f	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Pomacentridae_A	ANCESTRAL SPECIES	24	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000156784	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Amphiprion	ANCESTRAL SPECIES	15	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000156784	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Orange clownfish	MODERN SPECIES	22	RAPGEF3 (ENSAPEG00000023838)	itga5 (ENSAPEG00000023528)	CSRNP2 (ENSAPEG00000023501)	TFCP2 (ENSAPEG00000023466)	pou6f1 (ENSAPEG00000023434)	dazap2 (ENSAPEG00000023410)	ENSAPEG00000023392	bin2a (ENSAPEG00000023379)	ENSAPEG00000023368	racgap1 (ENSAPEG00000023350)	ENSAPEG00000023228	ENSAPEG00000023194	cs (ENSAPEG00000023167) #16	COQ10A (ENSAPEG00000023148) #17	ankrd52a (ENSAPEG00000023072) #18	rnf41 (ENSAPEG00000023047) #22	dgkaa (ENSAPEG00000022965) #37	tamalin (ENSAPEG00000022955)	nr4a1 (ENSAPEG00000022933)	ENSAPEG00000022909	letmd1 (ENSAPEG00000022890)	cd63 (ENSAPEG00000022873)	nemp1 (ENSAPEG00000022854)	ormdl2 (ENSAPEG00000022837)	ENSAPEG00000022813	PAN2 (ENSAPEG00000022760) #14	SPATS2 (ENSAPEG00000022696)	pym1 (ENSAPEG00000022679)	MMP19 (ENSAPEG00000022670)	ENSAPEG00000022659	ENSAPEG00000022644
Clown anemonefish	MODERN SPECIES	38	RAPGEF3 (ENSAOCG00000001572)	itga5 (ENSAOCG00000021629)	CSRNP2 (ENSAOCG00000021657)	TFCP2 (ENSAOCG00000021716)	pou6f1 (ENSAOCG00000021731)	dazap2 (ENSAOCG00000021758)	ENSAOCG00000001587	bin2a (ENSAOCG00000021786)	ENSAOCG00000021813	racgap1 (ENSAOCG00000021872)	ENSAOCG00000021894	ENSAOCG00000021926	cs (ENSAOCG00000021982) #16	COQ10A (ENSAOCG00000022000) #17	ankrd52a (ENSAOCG00000022018) #18	rnf41 (ENSAOCG00000022048) #22	dgkaa (ENSAOCG00000022131) #37	tamalin (ENSAOCG00000022158)	nr4a1 (ENSAOCG00000022187)	ENSAOCG00000001612	ENSAOCG00000022214	letmd1 (ENSAOCG00000022229)	cd63 (ENSAOCG00000022240)	nemp1 (ENSAOCG00000022256)	ormdl2 (ENSAOCG00000022272)	ENSAOCG00000002738	PAN2 (ENSAOCG00000022334) #14
Spiny chromis	MODERN SPECIES	698													cs (ENSAPOG00000022394) #16	COQ10A (ENSAPOG00000022409) #17	ankrd52a (ENSAPOG00000022541) #18	rnf41 (ENSAPOG00000022581) #22	dgkaa (ENSAPOG00000022664) #37	tamalin (ENSAPOG00000022685)	nr4a1 (ENSAPOG00000022705)	ENSAPOG00000022724	letmd1 (ENSAPOG00000022744)	cd63 (ENSAPOG00000022779)	nemp1 (ENSAPOG00000022796)	ormdl2 (ENSAPOG00000022814)	ENSAPOG00000022831	PAN2 (ENSAPOG00000022955) #14	ENSAPOG00000023003	pym1 (ENSAPOG00000023045)	MMP19 (ENSAPOG00000023118)	ENSAPOG00000023138	ENSAPOG00000023147
Bicolor damselfish	MODERN SPECIES	256	slc48a1a (ENSSPAG00000019127)	RAPGEF3 (ENSSPAG00000019135)	itga5 (ENSSPAG00000019165)	CSRNP2 (ENSSPAG00000019217)	TFCP2 (ENSSPAG00000019233)	pou6f1 (ENSSPAG00000019295)	dazap2 (ENSSPAG00000019387)	ENSSPAG00000019400	bin2a (ENSSPAG00000019415)	ENSSPAG00000019482	racgap1 (ENSSPAG00000019516)	ENSSPAG00000019556	cs (ENSSPAG00000019610) #16	COQ10A (ENSSPAG00000019653) #17	ankrd52a (ENSSPAG00000019685) #18	rnf41 (ENSSPAG00000019743) #22	dgkaa (ENSSPAG00000019763) #37	tamalin (ENSSPAG00000019810)	nr4a1 (ENSSPAG00000019834)	ENSSPAG00000019854	letmd1 (ENSSPAG00000019885)	cd63 (ENSSPAG00000019901)	nemp1 (ENSSPAG00000019930)	ormdl2 (ENSSPAG00000019944)	ENSSPAG00000019952	PAN2 (ENSSPAG00000019970) #14	ENSSPAG00000020087	pym1 (ENSSPAG00000020100)	MMP19 (ENSSPAG00000020112)	ENSSPAG00000020118	ENSSPAG00000020127
Cichlidae	ANCESTRAL SPECIES		ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d.c #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	18	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d.c #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Haplochromini	ANCESTRAL SPECIES	20	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d.c #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Burton s mouthbrooder	MODERN SPECIES	295	slc48a1a (ENSHBUG00000005886)	RAPGEF3 (ENSHBUG00000005863)	itga5 (ENSHBUG00000005822)	CSRNP2 (ENSHBUG00000005805)	TFCP2 (ENSHBUG00000005795)	pou6f1 (ENSHBUG00000005733)	dazap2 (ENSHBUG00000005704)	ENSHBUG00000005692	bin2a (ENSHBUG00000005683)	ENSHBUG00000005668	racgap1 (ENSHBUG00000005655)	ENSHBUG00000005617	cs (ENSHBUG00000005592) #16	COQ10A (ENSHBUG00000005547) #17	ankrd52a (ENSHBUG00000005501) #18	rnf41 (ENSHBUG00000005387) #22	dgkaa (ENSHBUG00000005367) #37	tamalin (ENSHBUG00000005348)	nr4a1 (ENSHBUG00000005341)	zgc:56699 (ENSHBUG00000005327)	letmd1 (ENSHBUG00000005314)	cd63 (ENSHBUG00000005298)	nemp1 (ENSHBUG00000005280)	ormdl2 (ENSHBUG00000005272)	ENSHBUG00000005260	PAN2 (ENSHBUG00000005234) #14
Haplochromini_A	ANCESTRAL SPECIES	17	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d.c #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
P. nyererei	DUPLICATION
P. nyererei	MODERN SPECIES	530	SLC26A9 (ENSPNYG00000003952)	slc48a1a (ENSPNYG00000003930)	RAPGEF3 (ENSPNYG00000003908)	itga5 (ENSPNYG00000003577)	CSRNP2 (ENSPNYG00000003538)	TFCP2 (ENSPNYG00000003477)	pou6f1 (ENSPNYG00000003426)	dazap2 (ENSPNYG00000003401)	bin2a (ENSPNYG00000003368)	ENSPNYG00000003346	racgap1 (ENSPNYG00000003303)	ENSPNYG00000003139	cs (ENSPNYG00000003110) #16	COQ10A (ENSPNYG00000003085) #17	ankrd52a (ENSPNYG00000002986) #18	rnf41 (ENSPNYG00000002960) #22	dgkaa (ENSPNYG00000002905) #37	tamalin (ENSPNYG00000002853)	nr4a1 (ENSPNYG00000002835)	zgc:56699 (ENSPNYG00000002811)	letmd1 (ENSPNYG00000002770)	cd63 (ENSPNYG00000002756)	nemp1 (ENSPNYG00000002751)	ormdl2 (ENSPNYG00000002735)	ENSPNYG00000002725	PAN2 (ENSPNYG00000002629) #14
P. nyererei	MODERN SPECIES	143																rnf41 (ENSPNYG00000003228) #22
Haplochromini_B	ANCESTRAL SPECIES	14	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d.c #14	ENSGT00390000013978.d.d.c #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a
Eastern happy	MODERN SPECIES	12	slc48a1a (ENSACLG00000022768)	RAPGEF3 (ENSACLG00000022780)	itga5 (ENSACLG00000022868)	CSRNP2 (ENSACLG00000022909)	TFCP2 (ENSACLG00000022928)	pou6f1 (ENSACLG00000023003)	dazap2 (ENSACLG00000023044)	ENSACLG00000023057	bin2a (ENSACLG00000023060)	ENSACLG00000023074	racgap1 (ENSACLG00000023093)	ENSACLG00000023141	cs (ENSACLG00000023163) #16	COQ10A (ENSACLG00000023180) #17	ankrd52a (ENSACLG00000023262) #18	rnf41 (ENSACLG00000023378) #22	dgkaa (ENSACLG00000023417) #37	tamalin (ENSACLG00000023511)	nr4a1 (ENSACLG00000023528)	zgc:56699 (ENSACLG00000023562)	letmd1 (ENSACLG00000023576)	cd63 (ENSACLG00000023612)	nemp1 (ENSACLG00000023630)	ormdl2 (ENSACLG00000023650)	ENSACLG00000023661	PAN2 (ENSACLG00000023674) #14	PAN2 (ENSACLG00000023821) #14	MAGI1 (ENSACLG00000024337)	ren (ENSACLG00000024519)	ENSACLG00000024540	FMOD (ENSACLG00000024593)
Zebra mbuna	MODERN SPECIES	1103	slc48a1a (ENSMZEG00005026515)	RAPGEF3 (ENSMZEG00005026513)	itga5 (ENSMZEG00005026510)	CSRNP2 (ENSMZEG00005026508)	TFCP2 (ENSMZEG00005026506)	pou6f1 (ENSMZEG00005026504)	dazap2 (ENSMZEG00005026503)	ENSMZEG00005026502	bin2a (ENSMZEG00005026500)	ENSMZEG00005026499	racgap1 (ENSMZEG00005026497)	ENSMZEG00005026494	cs (ENSMZEG00005026492) #16	COQ10A (ENSMZEG00005026490) #17	ankrd52a (ENSMZEG00005026486) #18	rnf41 (ENSMZEG00005026484) #22	dgkaa (ENSMZEG00005026482) #37	tamalin (ENSMZEG00005026481)	nr4a1 (ENSMZEG00005026480)	zgc:56699 (ENSMZEG00005026479)	letmd1 (ENSMZEG00005026478)	cd63 (ENSMZEG00005026477)	nemp1 (ENSMZEG00005026476)	ormdl2 (ENSMZEG00005026475)	ENSMZEG00005026474	PAN2 (ENSMZEG00005026472) #14	ENSMZEG00005026470	ENSMZEG00005026468	ENSMZEG00005026467	TAAR1 (ENSMZEG00005026466)	PAN2 (ENSMZEG00005026465) #14
Lyretail cichlid	MODERN SPECIES	321	slc48a1a (ENSNBRG00000004737)	RAPGEF3 (ENSNBRG00000004769)	itga5 (ENSNBRG00000004952)	CSRNP2 (ENSNBRG00000005365)	TFCP2 (ENSNBRG00000005389)	pou6f1 (ENSNBRG00000005439)	dazap2 (ENSNBRG00000005522)	ENSNBRG00000005541	bin2a (ENSNBRG00000005551)	ENSNBRG00000005604	ENSNBRG00000005628	ENSNBRG00000005642	cs (ENSNBRG00000005718) #16	COQ10A (ENSNBRG00000005908) #17	ankrd52a (ENSNBRG00000005939) #18	rnf41 (ENSNBRG00000006032) #22	dgkaa (ENSNBRG00000006079) #37	tamalin (ENSNBRG00000006263)	nr4a1 (ENSNBRG00000006325)	zgc:56699 (ENSNBRG00000006336)	letmd1 (ENSNBRG00000006364)	cd63 (ENSNBRG00000006433)	nemp1 (ENSNBRG00000006456)	ormdl2 (ENSNBRG00000006544)	ENSNBRG00000006563	PAN2 (ENSNBRG00000006585) #14	ENSNBRG00000006757	ENSNBRG00000006824	TAAR1 (ENSNBRG00000006846)	ENSNBRG00000006871 #14	SPATS2 (ENSNBRG00000006889)
Nile tilapia	MODERN SPECIES	12	SLC26A9 (ENSONIG00000016651)	slc48a1 (ENSONIG00000032657)	RAPGEF3 (ENSONIG00000016658)	itga5 (ENSONIG00000016666)	CSRNP2 (ENSONIG00000016679)	TFCP2 (ENSONIG00000016680)	pou6f1 (ENSONIG00000016683)	dazap2 (ENSONIG00000016687)	bin2a (ENSONIG00000016691)	ENSONIG00000016693	racgap1 (ENSONIG00000016694)	ENSONIG00000016700	cs (ENSONIG00000016703) #16	COQ10A (ENSONIG00000016705) #17	ankrd52a (ENSONIG00000016707) #18	rnf41 (ENSONIG00000039144) #22	dgkaa (ENSONIG00000016711) #37	tamalin (ENSONIG00000016716)	nr4a1 (ENSONIG00000016717)	zgc:56699 (ENSONIG00000016720)	letmd1 (ENSONIG00000016721)	cd63 (ENSONIG00000042482)	nemp1 (ENSONIG00000016727)	ormdl2 (ENSONIG00000016729)	ENSONIG00000038340	PAN2 (ENSONIG00000016732) #14	ENSONIG00000037044	PAN2 (ENSONIG00000042713) #14	ENSONIG00000016735	TAAR1 (ENSONIG00000035553)	ENSONIG00000036048
Midas cichlid	MODERN SPECIES	531	RAPGEF3 (ENSACIG00000014352)	itga5 (ENSACIG00000014031)	CSRNP2 (ENSACIG00000014006)	TFCP2 (ENSACIG00000013961)	pou6f1 (ENSACIG00000013927)	dazap2 (ENSACIG00000013895)	ENSACIG00000013887	bin2a (ENSACIG00000013866)	ENSACIG00000013852	racgap1 (ENSACIG00000013826)	ENSACIG00000013774	ENSACIG00000013769	cs (ENSACIG00000013738) #16	COQ10A (ENSACIG00000013724) #17	ankrd52a (ENSACIG00000013666) #18	rnf41 (ENSACIG00000013649) #22	dgkaa (ENSACIG00000013521) #37	tamalin (ENSACIG00000013473)	nr4a1 (ENSACIG00000013428)	zgc:56699 (ENSACIG00000013400)	letmd1 (ENSACIG00000013385)	cd63 (ENSACIG00000013176)	nemp1 (ENSACIG00000013151)	ormdl2 (ENSACIG00000013140)	ENSACIG00000013131	PAN2 (ENSACIG00000013079) #14	ENSACIG00000013046 #14	PAN2 (ENSACIG00000012858) #14	SPATS2 (ENSACIG00000012787)	pym1 (ENSACIG00000012769)	MMP19 (ENSACIG00000012736)
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Ballan wrasse	MODERN SPECIES	4	foxc1a (ENSLBEG00000016914)	MYLK4 (ENSLBEG00000016865)	wrnip1 (ENSLBEG00000016807)	ENSLBEG00000016759	DHX30 (ENSLBEG00000016705)	ENSLBEG00000016663	ENSLBEG00000016624	GPAA1 (ENSLBEG00000016565)	bin2a (ENSLBEG00000016519)	ENSLBEG00000016489	racgap1 (ENSLBEG00000016422)	ENSLBEG00000016374	cs (ENSLBEG00000016331) #16	COQ10A (ENSLBEG00000016301) #17	ankrd52a (ENSLBEG00000016223) #18	rnf41 (ENSLBEG00000016172) #22	dgkaa (ENSLBEG00000016113) #37	tamalin (ENSLBEG00000016065)	nr4a1 (ENSLBEG00000016018)	zgc:56699 (ENSLBEG00000015981)	cd63 (ENSLBEG00000015937)	letmd1 (ENSLBEG00000015899)	nemp1 (ENSLBEG00000015869)	ormdl2 (ENSLBEG00000015843)	ENSLBEG00000015826	PAN2 (ENSLBEG00000015763) #14	ENSLBEG00000015729	pym1 (ENSLBEG00000015707)	MMP19 (ENSLBEG00000015668)	ENSLBEG00000015642	ENSLBEG00000015625
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Perciformes	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.j	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00390000016940.c.a.a	ENSGT00940000160528.b	ENSGT00940000158675.a
Lumpfish	MODERN SPECIES	22	slc48a1a (ENSCLMG00005020580)	RAPGEF3 (ENSCLMG00005019505)	itga5 (ENSCLMG00005019276)	CSRNP2 (ENSCLMG00005019271)	TFCP2 (ENSCLMG00005019199)	pou6f1 (ENSCLMG00005019165)	dazap2 (ENSCLMG00005019163)	ENSCLMG00005019162	ENSCLMG00005019161	ENSCLMG00005019159	racgap1 (ENSCLMG00005019153)	ENSCLMG00005019120	cs (ENSCLMG00005019098) #16	COQ10A (ENSCLMG00005019096) #17	ankrd52a (ENSCLMG00005018751) #18	rnf41 (ENSCLMG00005018749) #22	dgkaa (ENSCLMG00005014856) #37	tamalin (ENSCLMG00005014822)	nr4a1 (ENSCLMG00005014819)	zgc:56699 (ENSCLMG00005014810)	letmd1 (ENSCLMG00005014801)	cd63 (ENSCLMG00005014800)	nemp1 (ENSCLMG00005014798)	ormdl2 (ENSCLMG00005014795)	ENSCLMG00005014794	PAN2 (ENSCLMG00005014783) #14	ENSCLMG00005014776	pym1 (ENSCLMG00005014775)	ENSCLMG00005014773	igfbp6b (ENSCLMG00005014772)	SPRYD3 (ENSCLMG00005014672)
Stickleback	MODERN SPECIES	11	ENSGACG00000011005	SLC26A9 (ENSGACG00000011000)	RAPGEF3 (ENSGACG00000010990)	itga5 (ENSGACG00000010945)	CSRNP2 (ENSGACG00000010943)	TFCP2 (ENSGACG00000010929)	pou6f1 (ENSGACG00000010925)	dazap2 (ENSGACG00000010906)	ENSGACG00000010902	ENSGACG00000010890	ENSGACG00000010885	ENSGACG00000010877	cs (ENSGACG00000010851) #16	COQ10A (ENSGACG00000010849) #17	ankrd52a (ENSGACG00000010842) #18	rnf41 (ENSGACG00000010838) #22	dgkaa (ENSGACG00000010810) #37	tamalin (ENSGACG00000010800)	nr4a1 (ENSGACG00000010788)	ENSGACG00000010783	letmd1 (ENSGACG00000010770)	cd63 (ENSGACG00000010752)	nemp1 (ENSGACG00000010747)	ormdl2 (ENSGACG00000010743)	PAN2 (ENSGACG00000010722) #14	ENSGACG00000010714	pym1 (ENSGACG00000010703)	ENSGACG00000010696	igfbp6b (ENSGACG00000010694)	spryd3 (ENSGACG00000010687)	lima1a (ENSGACG00000010685)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Pike perch	MODERN SPECIES	83					pou6f1 (ENSSLUG00000020732)	dazap2 (ENSSLUG00000020726)	ENSSLUG00000020723	ENSSLUG00000020720	bin2a (ENSSLUG00000020715)	ENSSLUG00000020710	racgap1 (ENSSLUG00000020656)	ENSSLUG00000020426	cs (ENSSLUG00000020378) #16	COQ10A (ENSSLUG00000020367) #17	ankrd52a (ENSSLUG00000020188) #18	rnf41 (ENSSLUG00000020167) #22	dgkaa (ENSSLUG00000018290) #37	tamalin (ENSSLUG00000018185)	nr4a1 (ENSSLUG00000018181)	zgc:56699 (ENSSLUG00000018176)	letmd1 (ENSSLUG00000018158)	cd63 (ENSSLUG00000018148)	nemp1 (ENSSLUG00000018144)	ormdl2 (ENSSLUG00000018136)	PAN2 (ENSSLUG00000018125) #14	ENSSLUG00000018114	pym1 (ENSSLUG00000018111)	MMP19 (ENSSLUG00000018106)	ENSSLUG00000018099	ENSSLUG00000018092	ocstamp (ENSSLUG00000018086)
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Gilthead seabream	MODERN SPECIES	21	ttpal (ENSSAUG00010008662)	hnf4a (ENSSAUG00010008665)	R3HDML (ENSSAUG00010008670)	fitm2 (ENSSAUG00010008674)	GDAP1L1 (ENSSAUG00010008676)	jph2 (ENSSAUG00010008678)	TUBA4B (ENSSAUG00010008679)	ENSSAUG00010008690	ENSSAUG00010008695	ENSSAUG00010008697	sarnp (ENSSAUG00010008698)	pmelb (ENSSAUG00010008705) #36	tuba1a (ENSSAUG00010008710)	ENSSAUG00010008712	ankrd52a (ENSSAUG00010008730) #18	rnf41 (ENSSAUG00010009251) #22	dgkaa (ENSSAUG00010009293) #37	tamalin (ENSSAUG00010011779)	nr4a1 (ENSSAUG00010011787)	zgc:56699 (ENSSAUG00010011789)	letmd1 (ENSSAUG00010011791)	cd63 (ENSSAUG00010011797)	nemp1 (ENSSAUG00010011798)	ormdl2 (ENSSAUG00010011802)	ENSSAUG00010004064	PAN2 (ENSSAUG00010004127) #14	ENSSAUG00010004220	pym1 (ENSSAUG00010004228)	MMP19 (ENSSAUG00010004232)	ENSSAUG00010004239	ENSSAUG00010004244
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
European seabass	MODERN SPECIES	14	ENSDLAG00005009504	slc48a1a (ENSDLAG00005009617)	ENSDLAG00005009723	itga5 (ENSDLAG00005012699)	TFCP2 (ENSDLAG00005013682)	pou6f1 (ENSDLAG00005013982)	dazap2 (ENSDLAG00005032502)	ENSDLAG00005014037	bin2a (ENSDLAG00005014044)	ENSDLAG00005028867	racgap1 (ENSDLAG00005014080)	ENSDLAG00005014138	cs (ENSDLAG00005014164) #16	COQ10A (ENSDLAG00005026742) #17	ankrd52a (ENSDLAG00005014328) #18	rnf41 (ENSDLAG00005018994) #22	dgkaa (ENSDLAG00005019030) #37	tamalin (ENSDLAG00005029261)	nr4a1 (ENSDLAG00005019471)	zgc:56699 (ENSDLAG00005019477)	letmd1 (ENSDLAG00005019490)	cd63 (ENSDLAG00005027639)	nemp1 (ENSDLAG00005019528)	ENSDLAG00005019546	ENSDLAG00005019563	ENSDLAG00005019571 #14	ENSDLAG00005032098	ENSDLAG00005027200	ENSDLAG00005019663	ENSDLAG00005019676	ENSDLAG00005019681
Large yellow croaker	MODERN SPECIES	487	SLC26A9 (ENSLCRG00005012566)	slc48a1a (ENSLCRG00005012564)	RAPGEF3 (ENSLCRG00005010395)	itga5 (ENSLCRG00005007326)	TFCP2 (ENSLCRG00005007067)	pou6f1 (ENSLCRG00005007061)	dazap2 (ENSLCRG00005007060)	ENSLCRG00005007059	bin2a (ENSLCRG00005007057)	ENSLCRG00005007056	racgap1 (ENSLCRG00005007048)	ENSLCRG00005007041	cs (ENSLCRG00005007040) #16	COQ10A (ENSLCRG00005007039) #17	ankrd52a (ENSLCRG00005006868) #18	rnf41 (ENSLCRG00005006856) #22	dgkaa (ENSLCRG00005003778) #37	tamalin (ENSLCRG00005003739)	nr4a1 (ENSLCRG00005003738)	zgc:56699 (ENSLCRG00005003737)	letmd1 (ENSLCRG00005003712)	cd63 (ENSLCRG00005003710)	nemp1 (ENSLCRG00005003709)	ormdl2 (ENSLCRG00005003708)	ENSLCRG00005003707	PAN2 (ENSLCRG00005003701) #14	ENSLCRG00005003699	pym1 (ENSLCRG00005003698)	MMP19 (ENSLCRG00005003697)	ENSLCRG00005003695	ENSLCRG00005003694
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00990000209708	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00940000154471.a.a	ENSGT00530000063540.a	ENSGT00940000161233	ENSGT00970000193554	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000157682.A	ENSGT00890000139436.A.b.b	ENSGT00940000153634.a
Tetraodon	MODERN SPECIES	24	pym1 (ENSTNIG00000012534)	ENSTNIG00000012533	ENSTNIG00000012532	RAPGEF3 (ENSTNIG00000012531)	itga5 (ENSTNIG00000012530)	CSRNP2 (ENSTNIG00000012529)	TFCP2 (ENSTNIG00000012528)	pou6f1 (ENSTNIG00000012527)	bin2a (ENSTNIG00000012526)	ENSTNIG00000012525	racgap1 (ENSTNIG00000012524)	ENSTNIG00000012523	cs (ENSTNIG00000012522) #16	COQ10A (ENSTNIG00000012521) #17	ankrd52a (ENSTNIG00000012520) #18	rnf41 (ENSTNIG00000012519) #22	dgkaa (ENSTNIG00000012518) #37	tamalin (ENSTNIG00000012517)	nr4a1 (ENSTNIG00000012516)	zgc:56699 (ENSTNIG00000012515)	letmd1 (ENSTNIG00000012514)	cd63 (ENSTNIG00000012513)	zgc:162200 (ENSTNIG00000012512)	tspy (ENSTNIG00000012511)	ENSTNIG00000000391	gpr173 (ENSTNIG00000012510)	wdr13 (ENSTNIG00000012509)	si:ch211-255g12.6 (ENSTNIG00000012508)	porcn (ENSTNIG00000012507)	PDZD4 (ENSTNIG00000012506)	kdm5c (ENSTNIG00000012505)
Fugu	MODERN SPECIES	15	slc48a1a (ENSTRUG00000019716)	RAPGEF3 (ENSTRUG00000014445)	itga5 (ENSTRUG00000014627)	CSRNP2 (ENSTRUG00000014896)	TFCP2 (ENSTRUG00000014900)	pou6f1 (ENSTRUG00000019684)	ENSTRUG00000025396	dazap2 (ENSTRUG00000015026)	ENSTRUG00000024126	ENSTRUG00000023312	racgap1 (ENSTRUG00000015063)	ENSTRUG00000015138	cs (ENSTRUG00000015248) #16	COQ10A (ENSTRUG00000015296) #17	ankrd52a (ENSTRUG00000015320) #18	rnf41 (ENSTRUG00000015412) #22	dgkaa (ENSTRUG00000015424) #37	tamalin (ENSTRUG00000015485)	nr4a1 (ENSTRUG00000015503)	zgc:56699 (ENSTRUG00000015537)	letmd1 (ENSTRUG00000015540)	cd63 (ENSTRUG00000032325)	zgc:162200 (ENSTRUG00000015638)	apex2 (ENSTRUG00000015660)	SLC38A5 (ENSTRUG00000015694)	ENSTRUG00000015758	sema3ga (ENSTRUG00000015786)	tspy (ENSTRUG00000022677)	ENSTRUG00000030104	ENSTRUG00000006424	wdr13 (ENSTRUG00000000214)
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Climbing perch	MODERN SPECIES	20	slc48a1a (ENSATEG00000024179)	ENSATEG00000024166	itga5 (ENSATEG00000024161)	CSRNP2 (ENSATEG00000024159)	TFCP2 (ENSATEG00000024145)	pou6f1 (ENSATEG00000024135)	dazap2 (ENSATEG00000024131)	ENSATEG00000024126	bin2a (ENSATEG00000024111)	ENSATEG00000028324	racgap1 (ENSATEG00000024090)	ENSATEG00000024088	cs (ENSATEG00000024082) #16	COQ10A (ENSATEG00000024080) #17	ankrd52a (ENSATEG00000024075) #18	rnf41 (ENSATEG00000024073) #22	dgkaa (ENSATEG00000024068) #37	tamalin (ENSATEG00000024066)	nr4a1 (ENSATEG00000024062)	zgc:56699 (ENSATEG00000024058)	ENSATEG00000029041	letmd1 (ENSATEG00000024051)	cd63 (ENSATEG00000026373)	ENSATEG00000024041	nemp1 (ENSATEG00000024044)	ORMDL2 (ENSATEG00000026454)	ENSATEG00000024037	ENSATEG00000024030 #14	ENSATEG00000024024	ENSATEG00000024022	ENSATEG00000024019
Siamese fighting fish	MODERN SPECIES	18	slc48a1a (ENSBSLG00000009613)	RAPGEF3 (ENSBSLG00000009669)	itga5 (ENSBSLG00000011343)	CSRNP2 (ENSBSLG00000012421)	TFCP2 (ENSBSLG00000012447)	pou6f1 (ENSBSLG00000013104)	dazap2 (ENSBSLG00000013165)	ENSBSLG00000013274	bin2a (ENSBSLG00000013297)	ENSBSLG00000013401	racgap1 (ENSBSLG00000013416)	ENSBSLG00000013523	cs (ENSBSLG00000013568) #16	COQ10A (ENSBSLG00000013656) #17	ankrd52a (ENSBSLG00000014186) #18	rnf41 (ENSBSLG00000014954) #22	dgkaa (ENSBSLG00000015038) #37	tamalin (ENSBSLG00000016569)	nr4a1 (ENSBSLG00000016678)	zgc:56699 (ENSBSLG00000016728)	ENSBSLG00000016777	fam43b (ENSBSLG00000016801)	ENSBSLG00000016894	pink1 (ENSBSLG00000016914)	ENSBSLG00000016959	agmat (ENSBSLG00000016986)	tmem269 (ENSBSLG00000017818)	ENSBSLG00000017858	RSBN1 (ENSBSLG00000018042)	ENSBSLG00000018050	ENSBSLG00000018075
Zig-zag eel	MODERN SPECIES	21	slc48a1a (ENSMAMG00000002749)	ENSMAMG00000002721	itga5 (ENSMAMG00000002623)	CSRNP2 (ENSMAMG00000027235)	TFCP2 (ENSMAMG00000002506)	pou6f1 (ENSMAMG00000002475)	dazap2 (ENSMAMG00000002447)	ENSMAMG00000025181	bin2a (ENSMAMG00000002416)	ENSMAMG00000028138	racgap1 (ENSMAMG00000002359)	ENSMAMG00000002273	cs (ENSMAMG00000002225) #16	COQ10A (ENSMAMG00000002205) #17	ankrd52a (ENSMAMG00000002079) #18	rnf41 (ENSMAMG00000002045) #22	dgkaa (ENSMAMG00000001919) #37	tamalin (ENSMAMG00000026223)	ENSMAMG00000026107	nr4a1 (ENSMAMG00000001869)	ENSMAMG00000001852	zgc:56699 (ENSMAMG00000001846)	letmd1 (ENSMAMG00000001819)	cd63 (ENSMAMG00000001770)	nemp1 (ENSMAMG00000001754)	ENSMAMG00000001731	ENSMAMG00000001717	ENSMAMG00000001624 #14	ENSMAMG00000001596	ENSMAMG00000026473	ENSMAMG00000001556
Carangaria	ANCESTRAL SPECIES	2	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169.f	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Seriola	ANCESTRAL SPECIES	25	ENSGT01100000263544.c.a.b.b	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169.f	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Yellowtail amberjack	MODERN SPECIES	2946	SLC26A9 (ENSSLDG00000014962)	slc48a1a (ENSSLDG00000014949)	RAPGEF3 (ENSSLDG00000014887)	itga5 (ENSSLDG00000014813)	CSRNP2 (ENSSLDG00000014785)	TFCP2 (ENSSLDG00000014739)	pou6f1 (ENSSLDG00000014697)	dazap2 (ENSSLDG00000014670)	bin2a (ENSSLDG00000014649)	ENSSLDG00000014632	racgap1 (ENSSLDG00000014593)	ENSSLDG00000014529	cs (ENSSLDG00000014483) #16	COQ10A (ENSSLDG00000014455) #17	ankrd52a (ENSSLDG00000014396) #18	rnf41 (ENSSLDG00000014357) #22	dgkaa (ENSSLDG00000014247) #37	tamalin (ENSSLDG00000014178)	nr4a1 (ENSSLDG00000014139)	zgc:56699 (ENSSLDG00000014113)	letmd1 (ENSSLDG00000014089)	cd63 (ENSSLDG00000014073)	nemp1 (ENSSLDG00000013995)	ormdl2 (ENSSLDG00000013965)	ENSSLDG00000013954	PAN2 (ENSSLDG00000013866) #14	ENSSLDG00000013765	pym1 (ENSSLDG00000013730)	MMP19 (ENSSLDG00000013708)	ENSSLDG00000013693	ENSSLDG00000013680
Greater amberjack	MODERN SPECIES	145	SLC26A9 (ENSSDUG00000003105)	slc48a1a (ENSSDUG00000003082)	RAPGEF3 (ENSSDUG00000003031)	itga5 (ENSSDUG00000002913)	CSRNP2 (ENSSDUG00000002887)	TFCP2 (ENSSDUG00000002794)	pou6f1 (ENSSDUG00000002648)	dazap2 (ENSSDUG00000002608)	bin2a (ENSSDUG00000002592)	ENSSDUG00000002565	racgap1 (ENSSDUG00000002510)	ENSSDUG00000002441	cs (ENSSDUG00000002409) #16	COQ10A (ENSSDUG00000002385) #17	ankrd52a (ENSSDUG00000002284) #18	rnf41 (ENSSDUG00000002253) #22	dgkaa (ENSSDUG00000002116) #37	tamalin (ENSSDUG00000002087)	nr4a1 (ENSSDUG00000002059)	zgc:56699 (ENSSDUG00000002033)	letmd1 (ENSSDUG00000002010)	cd63 (ENSSDUG00000001986)	nemp1 (ENSSDUG00000001969)	ormdl2 (ENSSDUG00000001950)	ENSSDUG00000001942	PAN2 (ENSSDUG00000001840) #14	ENSSDUG00000001816	pym1 (ENSSDUG00000001807)	MMP19 (ENSSDUG00000001784)	ENSSDUG00000001772	ENSSDUG00000001760
Barramundi perch	MODERN SPECIES		slc48a1a (ENSLCAG00010023859)	RAPGEF3 (ENSLCAG00010023792)	itga5 (ENSLCAG00010023411)	CSRNP2 (ENSLCAG00010023222)	TFCP2 (ENSLCAG00010023144)	dazap2 (ENSLCAG00010023107)	ENSLCAG00010023106	pou6f1 (ENSLCAG00010023104)	bin2a (ENSLCAG00010023102)	ENSLCAG00010023099	racgap1 (ENSLCAG00010023092)	ENSLCAG00010023084	cs (ENSLCAG00010023073) #16	COQ10A (ENSLCAG00010023064) #17	ankrd52a (ENSLCAG00010023015) #18	rnf41 (ENSLCAG00010022965) #22	dgkaa (ENSLCAG00010022486) #37	tamalin (ENSLCAG00010022298)	nr4a1 (ENSLCAG00010022294)	ENSLCAG00010022292	letmd1 (ENSLCAG00010022279)	cd63 (ENSLCAG00010022267)	nemp1 (ENSLCAG00010022257)	ormdl2 (ENSLCAG00010022248)	ENSLCAG00010022243	PAN2 (ENSLCAG00010022228) #14	rtknb (ENSLCAG00010022215)	ENSLCAG00010022211	dab2 (ENSLCAG00010022206)	c9 (ENSLCAG00010022204)	gas1b (ENSLCAG00010022199)
Pleuronectoidei	ANCESTRAL SPECIES	24	ENSGT00390000002307.e	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a	ENSGT00940000157629	ENSGT00940000160106	ENSGT00390000000685	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b.a	ENSGT00940000154657.C	ENSGT00390000006813 #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.h	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000002174.a	ENSGT00950000183178.a	ENSGT00940000176879	ENSGT00390000013978.d #14	ENSGT00390000001138.a	ENSGT00730000111107	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a	ENSGT01100000263484.B.b.a
Turbot	MODERN SPECIES	2	slc48a1a (ENSSMAG00000020778)	ENSSMAG00000020780	itga5 (ENSSMAG00000020785)	CSRNP2 (ENSSMAG00000020794)	TFCP2 (ENSSMAG00000020796)	pou6f1 (ENSSMAG00000020800)	dazap2 (ENSSMAG00000020808)	ENSSMAG00000020809	bin2a (ENSSMAG00000020811)	ENSSMAG00000031089	racgap1 (ENSSMAG00000020817)	ENSSMAG00000020835	cs (ENSSMAG00000020854) #16	COQ10A (ENSSMAG00000020860) #17	ankrd52a (ENSSMAG00000020861) #18	rnf41 (ENSSMAG00000020873) #22	dgkaa (ENSSMAG00000020876) #37	tamalin (ENSSMAG00000020882)	nr4a1 (ENSSMAG00000020885)	zgc:56699 (ENSSMAG00000020886)	letmd1 (ENSSMAG00000020891)	cd63 (ENSSMAG00000031724)	nemp1 (ENSSMAG00000020897)	ENSSMAG00000020898	ENSSMAG00000032462	ENSSMAG00000020901 #14	ENSSMAG00000020906	ENSSMAG00000028219	ENSSMAG00000020914	raf1a (ENSSMAG00000020915)	syn2a (ENSSMAG00000020924)
Tongue sole	MODERN SPECIES	1	IQSEC1 (ENSCSEG00000021426)	zgc:77375 (ENSCSEG00000021427)	cnbpa (ENSCSEG00000021428)	raf1a (ENSCSEG00000021429)	syn2a (ENSCSEG00000021430)	VGLL4 (ENSCSEG00000021431)	slc6a1a (ENSCSEG00000021432)	ENSCSEG00000021433	spryd4 (ENSCSEG00000021434) #8	GLS2 (ENSCSEG00000021435) #7	col2a1a (ENSCSEG00000021471)	aaas (ENSCSEG00000021476)	map3k12 (ENSCSEG00000021484)	pcbp2 (ENSCSEG00000021490)	ENSCSEG00000021501	rnf41 (ENSCSEG00000021504) #22	dgkaa (ENSCSEG00000021507) #37	tamalin (ENSCSEG00000021514)	nr4a1 (ENSCSEG00000021518)	zgc:56699 (ENSCSEG00000021520)	letmd1 (ENSCSEG00000021523)	cd63 (ENSCSEG00000021524)	nemp1 (ENSCSEG00000021526)	ormdl2 (ENSCSEG00000021527)	ENSCSEG00000021528	PAN2 (ENSCSEG00000021529) #14	pym1 (ENSCSEG00000021531)	SPATS2 (ENSCSEG00000021532)	MMP19 (ENSCSEG00000021533)	ENSCSEG00000021536	ENSCSEG00000021538
Pinecone sodierfish	MODERN SPECIES	21	slc48a1a (ENSMMDG00005013912)	RAPGEF3 (ENSMMDG00005012992)	itga5 (ENSMMDG00005012923)	CSRNP2 (ENSMMDG00005012869)	TFCP2 (ENSMMDG00005012846)	pou6f1 (ENSMMDG00005012835)	dazap2 (ENSMMDG00005012822)	ENSMMDG00005012820	bin2a (ENSMMDG00005012812)	ENSMMDG00005012808	racgap1 (ENSMMDG00005012748)	ENSMMDG00005012743	cs (ENSMMDG00005012684) #16	COQ10A (ENSMMDG00005012674) #17	ankrd52a (ENSMMDG00005012257) #18	rnf41 (ENSMMDG00005012233) #22	dgkaa (ENSMMDG00005012109) #37	tamalin (ENSMMDG00005012094)	nr4a1 (ENSMMDG00005011963)	zgc:56699 (ENSMMDG00005011956)	letmd1 (ENSMMDG00005011953)	cd63 (ENSMMDG00005011950)	nemp1 (ENSMMDG00005011946)	ormdl2 (ENSMMDG00005011943)	ENSMMDG00005011941	PAN2 (ENSMMDG00005011929) #14	SPATS2 (ENSMMDG00005011924)	pym1 (ENSMMDG00005011923)	MMP19 (ENSMMDG00005011922)	ENSMMDG00005011921	ENSMMDG00005011920
Cod	MODERN SPECIES		slc48a1a (ENSGMOG00000035690)	ENSGMOG00000007516	itga5 (ENSGMOG00000007499)	CSRNP2 (ENSGMOG00000032567)	TFCP2 (ENSGMOG00000007483)	pou6f1 (ENSGMOG00000007478)	dazap2 (ENSGMOG00000007477)	ENSGMOG00000020363	bin2a (ENSGMOG00000024770)	ENSGMOG00000007466	racgap1 (ENSGMOG00000007393)	ENSGMOG00000007376	cs (ENSGMOG00000007367) #16	ankrd52a (ENSGMOG00000007343) #18	COQ10A (ENSGMOG00000007361) #17	rnf41 (ENSGMOG00000031198) #22	dgkaa (ENSGMOG00000007320) #37	tamalin (ENSGMOG00000030960)	nr4a1 (ENSGMOG00000022735)	zgc:56699 (ENSGMOG00000007295)	letmd1 (ENSGMOG00000007287)	cd63 (ENSGMOG00000007279)	nemp1 (ENSGMOG00000007268)	ENSGMOG00000034595	ENSGMOG00000029460	ENSGMOG00000007249 #14	ENSGMOG00000007242	ENSGMOG00000007239	ENSGMOG00000024213	ENSGMOG00000030733	ENSGMOG00000019510
Protacanthopterygii	ANCESTRAL SPECIES	3	ENSGT00390000001799	ENSGT00940000157076.j	ENSGT00390000016889	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000160431	ENSGT00940000154102.a.h	ENSGT01050000244888.a.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b	ENSGT00940000154657.C.h	ENSGT00940000164642	ENSGT00390000006813.h.a #16	ENSGT00950000182908.B.c.a #18	ENSGT00940000161079 #21	ENSGT00530000063647.B #22	ENSGT00940000157144.c.b #37	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g	ENSGT01020000230633	ENSGT00390000006330.a.b	ENSGT00940000155637	ENSGT00940000156785	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a	ENSGT00530000063853.a.a.a	ENSGT00400000022103.b	ENSGT00950000182844.a.a.a	ENSGT00890000139515	ENSGT00940000159236
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	16	ctsz (ENSELUG00000021346)	nelfcd (ENSELUG00000021399)	kdm5ba (ENSELUG00000021541)	rabif (ENSELUG00000021569)	adipor1a (ENSELUG00000021608)	cyb5r1 (ENSELUG00000021879)	rnpep (ENSELUG00000021950)	inavab (ENSELUG00000022007)	GPR25 (ENSELUG00000022028)	olfml3b (ENSELUG00000022055)	SYT6 (ENSELUG00000022087)	cnpy2 (ENSELUG00000022122)	cs (ENSELUG00000022154) #16	ANKRD52 (ENSELUG00000022224) #18	NABP2 (ENSELUG00000022241) #21	RNF41 (ENSELUG00000022261) #22	DGKA (ENSELUG00000022272) #37	NR4A1 (ENSELUG00000022293)	ENSELUG00000022320	ENSELUG00000022331	nab2 (ENSELUG00000022340)	ENSELUG00000022356	INPP1 (ENSELUG00000022360)	ENSELUG00000022410	sys1 (ENSELUG00000022416)	ENSELUG00000022434	ENSELUG00000022465	arfgap1 (ENSELUG00000022551)	ELMO2 (ENSELUG00000022734)	tbc1d20 (ENSELUG00000000970)	rbck1 (ENSELUG00000022786)
Northern pike	MODERN SPECIES	11	ENSELUG00000003828	itga5 (ENSELUG00000003792)	CSRNP2 (ENSELUG00000003719)	TFCP2 (ENSELUG00000003672)	pou6f1 (ENSELUG00000003605)	dazap2 (ENSELUG00000003574)	ENSELUG00000032748	bin2a (ENSELUG00000003553)	ENSELUG00000030651	racgap1 (ENSELUG00000003517)	ENSELUG00000003490	cs (ENSELUG00000003461) #16	COQ10A (ENSELUG00000003436) #17	ankrd52a (ENSELUG00000003403) #18	SLC39A5 (ENSELUG00000003346) #20	rnf41 (ENSELUG00000031256) #22	dgkaa (ENSELUG00000003323) #37	tamalin (ENSELUG00000003291)	nr4a1 (ENSELUG00000003265)	gtsf1 (ENSELUG00000003242)	letmd1 (ENSELUG00000003207)	cd63 (ENSELUG00000003182)	nemp1 (ENSELUG00000003170)	ormdl2 (ENSELUG00000003149)	ENSELUG00000003127	PAN2 (ENSELUG00000024604) #14	ENSELUG00000024295	pym1 (ENSELUG00000024250)	MMP19 (ENSELUG00000024234)	ENSELUG00000024091	ENSELUG00000024084
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	92												ENSGT00940000164642.f	ENSGT00390000006813.h.a.a #16	ENSGT00950000182908.B.c.a.a #18	ENSGT00940000161079.c #21	ENSGT00530000063647.B.i.a #22	ENSGT00950000183038.a.b.a.g.a	ENSGT00950000183167.a.b.b.b.r	ENSGT01020000230633.a	ENSGT00390000006330.a.b.a	ENSGT00940000155637.jb	ENSGT00940000156785.`b	ENSGT00940000154347.a.d	ENSGT00530000063853.a.a.a.e	ENSGT00400000022103.b.b	ENSGT00890000139515.d	ENSGT00940000159236.e	ENSGT00390000014944.a.b	ENSGT00940000166000.b	ENSGT00390000006896.x.b	ENSGT00950000182986.a.a.o
Salmoninae_a	ANCESTRAL SPECIES	15	ENSGT00530000063255.A.l	ENSGT00940000155569.a.a.g	ENSGT00940000157076.j.a	ENSGT00390000016889.p	ENSGT00940000154563.ab.a	ENSGT00940000160784.a.a	ENSGT00940000160431.f	ENSGT00940000154102.a.h.c	ENSGT01050000244888.a.b.a	ENSGT00940000158083.b.d	ENSGT00940000157665.b.c	ENSGT00940000164642.f	ENSGT00390000006813.h.a.a #16	ENSGT00950000182908.B.c.a.a #18	ENSGT00940000161079.c #21	ENSGT00530000063647.B.i.a #22	ENSGT00950000183038.a.b.a.g.a	ENSGT00950000183167.a.b.b.b.r	ENSGT01020000230633.a	ENSGT00390000006330.a.b.a	ENSGT00940000155637.jb	ENSGT00940000156785.`b	ENSGT00940000154347.a.d	ENSGT00530000063853.a.a.a.e	ENSGT00400000022103.b.b	ENSGT00950000182844.a.a.a.b	ENSGT00890000139515.d	ENSGT00940000159236.e	ENSGT00390000014944.a.b	ENSGT00940000166000.b	ENSGT00390000006896.x.b
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000161297	ENSGT01000000214440.B.c	ENSGT00530000063255.A.l	ENSGT00940000155569.a.a.g	ENSGT00940000157076.j.a	ENSGT00390000016889.p	ENSGT00940000154563.ab.a	ENSGT00940000160784.a.a	ENSGT00940000154102.a.h.c	ENSGT01050000244888.a.b.a	ENSGT00940000157665.b.c	ENSGT00940000164642.f	ENSGT00390000006813.h.a.a #16	ENSGT00950000182908.B.c.a.a #18	ENSGT00940000161079.c #21	ENSGT00530000063647.B.i.a #22	ENSGT00950000183038.a.b.a.g.a	ENSGT00950000183167.a.b.b.b.r	ENSGT01020000230633.a	ENSGT00390000006330.a.b.a	ENSGT00940000155637.jb	ENSGT00940000156785.`b	ENSGT00940000154347.a.d	ENSGT00530000063853.a.a.a.e	ENSGT00400000022103.b.b	ENSGT00890000139515.d	ENSGT00940000159236.e	ENSGT00390000014944.a.b	ENSGT00940000166000.b	ENSGT00390000006896.x.b	ENSGT00950000182986.a.a.o
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000047786	ENSOMYG00000047787	ctsz (ENSOMYG00000047788)	kdm5ba (ENSOMYG00000047792)	RABIF (ENSOMYG00000049948)	adipor1a (ENSOMYG00000047797)	CYB5R1 (ENSOMYG00000047803)	inavab (ENSOMYG00000001242)	ENSOMYG00000001263	ENSOMYG00000001332	ENSOMYG00000059120	ENSOMYG00000001380	ENSOMYG00000001501 #16	ANKRD52 (ENSOMYG00000001819) #18	ENSOMYG00000001978 #21	RNF41 (ENSOMYG00000001998) #22	ENSOMYG00000002010	ENSOMYG00000002039	ENSOMYG00000002066	nab2 (ENSOMYG00000002090)	ENSOMYG00000002117	ENSOMYG00000002135	sys1 (ENSOMYG00000049076)	ENSOMYG00000002200	ssr1 (ENSOMYG00000002217)	ENSOMYG00000002238	ENSOMYG00000003053	ENSOMYG00000004377	ENSOMYG00000004453	ENSOMYG00000004468	ENSOMYG00000071428
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00940000155330.c.e	ENSGT01000000214440.B.c	ENSGT00530000063255.A.l	ENSGT00940000155569.a.a.g	ENSGT00940000157076.j.a	ENSGT00390000016889.p	ENSGT00940000154563.ab.a	ENSGT00940000160784.a.a	ENSGT00940000154102.a.h.c	ENSGT01050000244888.a.b.a	ENSGT00940000157665.b.c	ENSGT00940000164642.f	ENSGT00390000006813.h.a.a #16	ENSGT00950000182908.B.c.a.a #18	ENSGT00940000161079.c #21	ENSGT00530000063647.B.i.a #22	ENSGT00950000183038.a.b.a.g.a	ENSGT00950000183167.a.b.b.b.r	ENSGT01020000230633.a	ENSGT00390000006330.a.b.a	ENSGT00940000155637.jb	ENSGT00940000156785.`b	ENSGT00940000154347.a.d	ENSGT00530000063853.a.a.a.e	ENSGT00400000022103.b.b	ENSGT00890000139515.d	ENSGT00940000159236.e	ENSGT00390000014944.a.b	ENSGT00940000166000.b	ENSGT00390000006896.x.b	ENSGT00950000182986.a.a.o
Chinook salmon	MODERN SPECIES	31	npepl1 (ENSOTSG00005038131)	ctsz (ENSOTSG00005038133)	kdm5ba (ENSOTSG00005038159)	rabif (ENSOTSG00005038527)	adipor1a (ENSOTSG00005038528)	CYB5R1 (ENSOTSG00005038551)	inavab (ENSOTSG00005038554)	GPR25 (ENSOTSG00005038558)	SYT6 (ENSOTSG00005038573)	ENSOTSG00005038575	cnpy2 (ENSOTSG00005038576)	cs (ENSOTSG00005038587) #16	ANKRD52 (ENSOTSG00005038618) #18	ENSOTSG00005038908	NABP2 (ENSOTSG00005038909) #21	RNF41 (ENSOTSG00005038910) #22	NR4A1 (ENSOTSG00005038911)	ENSOTSG00005038912	ENSOTSG00005038913	nab2 (ENSOTSG00005038916)	ENSOTSG00005015536	ENSOTSG00005015537	sys1 (ENSOTSG00005015538)	ENSOTSG00005015539	ENSOTSG00005015542	arfgap1 (ENSOTSG00005015544)	ELMO2 (ENSOTSG00005015554)	tbc1d20 (ENSOTSG00005020687)	rbck1 (ENSOTSG00005020688)	maf1a (ENSOTSG00005020689)	trib3 (ENSOTSG00005020690)
Coho salmon	MODERN SPECIES	25	slc11a2 (ENSOKIG00005034199)	STX16 (ENSOKIG00005034527)	NPEPL1 (ENSOKIG00005034565)	ctsz (ENSOKIG00005034706)	kdm5ba (ENSOKIG00005034882)	RABIF (ENSOKIG00005035829)	adipor1a (ENSOKIG00005035855)	CYB5R1 (ENSOKIG00005035988)	inavab (ENSOKIG00005036026)	GPR25 (ENSOKIG00005036041)	SYT6 (ENSOKIG00005036077)	ENSOKIG00005036089	ENSOKIG00005036158 #16	ANKRD52 (ENSOKIG00005036582) #18	NABP2 (ENSOKIG00005037139) #21	RNF41 (ENSOKIG00005037149) #22	ENSOKIG00005037167	NR4A1 (ENSOKIG00005037179)	ENSOKIG00005037192	ENSOKIG00005037209	nab2 (ENSOKIG00005037228)	ENSOKIG00005037240	ENSOKIG00005037274	ENSOKIG00005037391	SYS1 (ENSOKIG00005037401)	ENSOKIG00005037422	ENSOKIG00005037447	ENSOKIG00005037476	ARFGAP1 (ENSOKIG00005037522)	ELMO2 (ENSOKIG00005037854)	TBC1D20 (ENSOKIG00005040844)
Salmo	ANCESTRAL SPECIES	42	ENSGT00940000155569.a.a.g	ENSGT00390000001799.c	ENSGT00940000157076.j.a	ENSGT00390000016889.p	ENSGT00940000154563.ab.a	ENSGT00940000160784.a.a	ENSGT00940000160431.f	ENSGT00940000154102.a.h.c	ENSGT01050000244888.a.b.a	ENSGT00940000158083.b.d	ENSGT00940000157665.b.c	ENSGT00940000164642.f	ENSGT00390000006813.h.a.a #16	ENSGT00950000182908.B.c.a.a #18	ENSGT00940000161079.c #21	ENSGT00530000063647.B.i.a #22	ENSGT00950000183038.a.b.a.g.a	ENSGT00950000183167.a.b.b.b.r	ENSGT01020000230633.a	ENSGT00390000006330.a.b.a	ENSGT00940000155637.jb	ENSGT00940000156785.`b	ENSGT00940000161997.b.c	ENSGT00940000154347.a.d	ENSGT00530000063853.a.a.a.e	ENSGT00400000022103.b.b	ENSGT00950000182844.a.a.a.b	ENSGT00890000139515.d	ENSGT00940000159236.e	ENSGT00390000014944.a.b	ENSGT00390000006896.x.b
River trout	MODERN SPECIES	7	ctsz (ENSSTUG00000015017)	nelfcd (ENSSTUG00000014976)	kdm5ba (ENSSTUG00000014394)	rabif (ENSSTUG00000014351)	adipor1a (ENSSTUG00000014307)	CYB5R1 (ENSSTUG00000014240)	rnpep (ENSSTUG00000014225)	inavab (ENSSTUG00000014214)	GPR25 (ENSSTUG00000014199)	ENSSTUG00000014192	SYT6 (ENSSTUG00000014184)	cnpy2 (ENSSTUG00000014176)	cs (ENSSTUG00000014032) #16	ANKRD52 (ENSSTUG00000013535) #18	NABP2 (ENSSTUG00000013506) #21	RNF41 (ENSSTUG00000013478) #22	NR4A1 (ENSSTUG00000013468)	ENSSTUG00000013461	ENSSTUG00000013450	nab2 (ENSSTUG00000013444)	ENSSTUG00000013430	ENSSTUG00000013421	ENSSTUG00000013414	sys1 (ENSSTUG00000013404)	ENSSTUG00000013386	ENSSTUG00000013368	ENSSTUG00000013341	arfgap1 (ENSSTUG00000013307)	ELMO2 (ENSSTUG00000009054)	tbc1d20 (ENSSTUG00000008901)	maf1a (ENSSTUG00000008883)
Huchen	MODERN SPECIES	1434												cnpy2 (ENSHHUG00000030891)	cs (ENSHHUG00000030905) #16	ANKRD52 (ENSHHUG00000030912) #18	NABP2 (ENSHHUG00000030954) #21	RNF41 (ENSHHUG00000030976) #22	ENSHHUG00000030988	NR4A1 (ENSHHUG00000030993)	ENSHHUG00000031001	ENSHHUG00000031009	nab2 (ENSHHUG00000031019)	ENSHHUG00000031025	INPP1 (ENSHHUG00000031029)	ENSHHUG00000031037	ENSHHUG00000031042	sys1 (ENSHHUG00000031068)	ENSHHUG00000031081	ENSHHUG00000031098
Salmoninae	ANCESTRAL SPECIES	3	ENSGT00390000016889.o	ENSGT00940000154563.ab.b	ENSGT00940000160784.a.b	ENSGT00940000153962.b.f	ENSGT00940000160431.e	ENSGT00940000154102.a.h.d	ENSGT01050000244888.a.b.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b.d	ENSGT00940000154657.C.h	ENSGT00940000164642.e	ENSGT00390000006813.h.a.b #16	ENSGT00940000160056.b #17	ENSGT00950000182908.B.c.a.b #18	ENSGT00940000161079.d #21	ENSGT00530000063647.B.i.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g.b	ENSGT01020000230633.b	ENSGT00390000006330.a.b.b	ENSGT00940000155637.kb	ENSGT00940000156785.ab	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a.c	ENSGT00530000063853.a.a.a.f	ENSGT00400000022103.b.a	ENSGT00950000182844.a.a.a	ENSGT00890000139515.c	ENSGT00940000159236.f	ENSGT00390000014944.a.a
Salmoninae_a	ANCESTRAL SPECIES	21	ENSGT00390000016889.o	ENSGT00940000154563.ab.b	ENSGT00940000160784.a.b	ENSGT00940000153962.b.f	ENSGT00940000160431.e	ENSGT00940000154102.a.h.d	ENSGT01050000244888.a.b.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b.d	ENSGT00940000154657.C.h	ENSGT00940000164642.e	ENSGT00390000006813.h.a.b #16	ENSGT00940000160056.b #17	ENSGT00950000182908.B.c.a.b #18	ENSGT00940000161079.d #21	ENSGT00530000063647.B.i.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g.b	ENSGT01020000230633.b	ENSGT00390000006330.a.b.b	ENSGT00940000155637.kb	ENSGT00940000156785.ab	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a.c	ENSGT00530000063853.a.a.a.f	ENSGT00400000022103.b.a	ENSGT00950000182844.a.a.a.a	ENSGT00890000139515.c	ENSGT00940000159236.f	ENSGT00390000014944.a.a
Salmo	ANCESTRAL SPECIES	6	ENSGT00940000157076.j.b	ENSGT00390000016889.o	ENSGT00940000154563.ab.b	ENSGT00940000160784.a.b	ENSGT00940000160431.e	ENSGT00940000154102.a.h.d	ENSGT01050000244888.a.b.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b.d	ENSGT00940000154657.C.h	ENSGT00940000164642.e	ENSGT00390000006813.h.a.b #16	ENSGT00940000160056.b #17	ENSGT00950000182908.B.c.a.b #18	ENSGT00940000161079.d #21	ENSGT00530000063647.B.i.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g.b	ENSGT01020000230633.b	ENSGT00390000006330.a.b.b	ENSGT00940000155637.kb	ENSGT00940000156785.ab	ENSGT00940000161997.b.d	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a.c	ENSGT00530000063853.a.a.a.f	ENSGT00400000022103.b.a	ENSGT00950000182844.a.a.a.a	ENSGT00890000139515.c	ENSGT00940000159236.f	ENSGT00390000014944.a.a
Atlantic salmon	MODERN SPECIES	3	nelfcd (ENSSSAG00000105567)	kdm5ba (ENSSSAG00000054396)	adipor1a (ENSSSAG00000054245)	CYB5R1 (ENSSSAG00000054114)	rnpep (ENSSSAG00000053837)	inavab (ENSSSAG00000089670)	ENSSSAG00000107630	olfml3 (ENSSSAG00000053825)	ENSSSAG00000053772	ENSSSAG00000086753	CNPY2 (ENSSSAG00000053756)	CS (ENSSSAG00000053601) #16	COQ10A (ENSSSAG00000053584) #17	ANKRD52 (ENSSSAG00000047201) #18	NABP2 (ENSSSAG00000088694) #21	RNF41 (ENSSSAG00000047075) #22	ENSSSAG00000045949 #37	ENSSSAG00000045856	ENSSSAG00000103800	nab2 (ENSSSAG00000045834)	ENSSSAG00000045826	inpp (ENSSSAG00000045816)	ENSSSAG00000052994	ENSSSAG00000045783	ENSSSAG00000045772	nrn1 (ENSSSAG00000102571)	ENSSSAG00000045647	ENSSSAG00000045636	ENSSSAG00000045620	ENSSSAG00000096084	ENSSSAG00000053457
River trout	MODERN SPECIES	5	nelfcd (ENSSTUG00000038408)	kdm5ba (ENSSTUG00000038467)	rabif (ENSSTUG00000039200)	adipor1a (ENSSTUG00000039227)	CYB5R1 (ENSSTUG00000039307)	rnpep (ENSSTUG00000039359)	inavab (ENSSTUG00000039442)	GPR25 (ENSSTUG00000039446)	olfml3b (ENSSTUG00000039450)	SYT6 (ENSSTUG00000039458)	cnpy2 (ENSSTUG00000039461)	cs (ENSSTUG00000039478) #16	COQ10A (ENSSTUG00000039522) #17	ANKRD52 (ENSSTUG00000039580) #18	NABP2 (ENSSTUG00000040486) #21	RNF41 (ENSSTUG00000040491) #22	DGKA (ENSSTUG00000040513) #37	NR4A1 (ENSSTUG00000040784)	ENSSTUG00000040793	nab2 (ENSSTUG00000040800)	ENSSTUG00000040840	INPP1 (ENSSTUG00000040866)	ENSSTUG00000040911	ENSSTUG00000040953	ENSSTUG00000040981	sys1 (ENSSTUG00000040990)	ENSSTUG00000041010	ENSSTUG00000041033	ENSSTUG00000000930	arfgap1 (ENSSTUG00000001388)	ELMO2 (ENSSTUG00000001498)
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000157076.j.b	ENSGT00390000016889.o	ENSGT00940000154563.ab.b	ENSGT00940000153962.b.f	ENSGT00940000160431.e	ENSGT00940000154102.a.h.d	ENSGT01050000244888.a.b.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b.d	ENSGT00940000154657.C.h	ENSGT00940000164642.e	ENSGT00390000006813.h.a.b #16	ENSGT00940000160056.b #17	ENSGT00950000182908.B.c.a.b #18	ENSGT00940000161079.d #21	ENSGT00530000063647.B.i.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g.b	ENSGT01020000230633.b	ENSGT00390000006330.a.b.b	ENSGT00940000155637.kb	ENSGT00940000156785.ab	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a.c	ENSGT00530000063853.a.a.a.f	ENSGT00400000022103.b.a	ENSGT00950000182844.a.a.a.a	ENSGT00890000139515.c	ENSGT00940000159236.f	ENSGT00390000014944.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000157076.j.b	ENSGT00390000016889.o	ENSGT00940000154563.ab.b	ENSGT00940000153962.b.f	ENSGT00940000160431.e	ENSGT00940000154102.a.h.d	ENSGT01050000244888.a.b.b	ENSGT00940000158083.b.c	ENSGT00940000157665.b.d	ENSGT00940000154657.C.h	ENSGT00940000164642.e	ENSGT00390000006813.h.a.b #16	ENSGT00940000160056.b #17	ENSGT00950000182908.B.c.a.b #18	ENSGT00940000161079.d #21	ENSGT00530000063647.B.i.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.g.b	ENSGT01020000230633.b	ENSGT00390000006330.a.b.b	ENSGT00940000155637.kb	ENSGT00940000156785.ab	ENSGT00940000161997.b	ENSGT01010000222336.b.a.a	ENSGT00940000154347.a.c	ENSGT00530000063853.a.a.a.f	ENSGT00400000022103.b.a	ENSGT00950000182844.a.a.a.a	ENSGT00890000139515.c	ENSGT00940000159236.f	ENSGT00390000014944.a.a
Chinook salmon	MODERN SPECIES	11	ctsz (ENSOTSG00005000985)	nelfcd (ENSOTSG00005000752)	kdm5ba (ENSOTSG00005000722)	adipor1a (ENSOTSG00005000698)	cyb5r1 (ENSOTSG00005000695)	rnpep (ENSOTSG00005000667)	inavab (ENSOTSG00005000652)	GPR25 (ENSOTSG00005000403)	olfml3b (ENSOTSG00005000400)	SYT6 (ENSOTSG00005000265)	cnpy2 (ENSOTSG00005010931)	cs (ENSOTSG00005010929) #16	COQ10A (ENSOTSG00005010927) #17	ANKRD52 (ENSOTSG00005009423) #18	NABP2 (ENSOTSG00005009417) #21	RNF41 (ENSOTSG00005009415) #22	DGKA (ENSOTSG00005009104) #37	NR4A1 (ENSOTSG00005009102)	ENSOTSG00005009101	ENSOTSG00005009100	nab2 (ENSOTSG00005009099)	ENSOTSG00005009098	INPP1 (ENSOTSG00005009097)	ENSOTSG00005009096	ENSOTSG00005009095	sys1 (ENSOTSG00005009094)	ENSOTSG00005009093	ENSOTSG00005009092	ENSOTSG00005009091	arfgap1 (ENSOTSG00005009090)	ELMO2 (ENSOTSG00005005394)
Coho salmon	MODERN SPECIES		kdm5ba (ENSOKIG00005004542)	rabif (ENSOKIG00005005016)	adipor1a (ENSOKIG00005017156)	cyb5r1 (ENSOKIG00005017202)	rnpep (ENSOKIG00005017230)	inavab (ENSOKIG00005017337)	GPR25 (ENSOKIG00005017344)	olfml3b (ENSOKIG00005017353)	SYT6 (ENSOKIG00005017354)	ENSOKIG00005017358	cnpy2 (ENSOKIG00005017373)	CS (ENSOKIG00005017403) #16	COQ10A (ENSOKIG00005017423) #17	ANKRD52 (ENSOKIG00005017520) #18	NABP2 (ENSOKIG00005019446) #21	RNF41 (ENSOKIG00005019449) #22	DGKA (ENSOKIG00005019752) #37	NR4A1 (ENSOKIG00005019902)	ENSOKIG00005019911	nab2 (ENSOKIG00005019919)	ENSOKIG00005019934	INPP1 (ENSOKIG00005019946)	ENSOKIG00005019952	ENSOKIG00005019964	sys1 (ENSOKIG00005019968)	ENSOKIG00005019974	ENSOKIG00005019984	ENSOKIG00005020005	ENSOKIG00005020010	arfgap1 (ENSOKIG00005020036)	ELMO2 (ENSOKIG00005020230)
Rainbow trout	MODERN SPECIES	8	nelfcd (ENSOMYG00000017042)	kdm5ba (ENSOMYG00000016140)	rabif (ENSOMYG00000016067)	adipor1a (ENSOMYG00000016027)	cyb5r1 (ENSOMYG00000016018)	rnpep (ENSOMYG00000015580)	inavab (ENSOMYG00000015517)	ENSOMYG00000015508	olfml3b (ENSOMYG00000015497)	ENSOMYG00000015483	cnpy2 (ENSOMYG00000015457)	CS (ENSOMYG00000015431) #16	COQ10A (ENSOMYG00000015418) #17	ANKRD52 (ENSOMYG00000013942) #18	NABP2 (ENSOMYG00000013712) #21	RNF41 (ENSOMYG00000013704) #22	ENSOMYG00000012847 #37	ENSOMYG00000012729	ENSOMYG00000077753	ENSOMYG00000012726	nab2 (ENSOMYG00000012721)	ENSOMYG00000012706	ENSOMYG00000012695	ENSOMYG00000012690	ENSOMYG00000039612	ENSOMYG00000012675	ENSOMYG00000012662	ENSOMYG00000012656	ENSOMYG00000075749	ENSOMYG00000054641	ENSOMYG00000012640
Huchen	MODERN SPECIES	190	kdm5ba (ENSHHUG00000031546)	rabif (ENSHHUG00000031663)	adipor1a (ENSHHUG00000031669)	cyb5r1 (ENSHHUG00000031677)	rnpep (ENSHHUG00000031705)	inavab (ENSHHUG00000031804)	GPR25 (ENSHHUG00000031810)	olfml3b (ENSHHUG00000031812)	SYT6 (ENSHHUG00000031816)	ENSHHUG00000031820	cnpy2 (ENSHHUG00000031822)	cs (ENSHHUG00000031828) #16	COQ10A (ENSHHUG00000031854) #17	ANKRD52 (ENSHHUG00000031865) #18	NABP2 (ENSHHUG00000031965) #21	RNF41 (ENSHHUG00000031970) #22	DGKA (ENSHHUG00000031984) #37	NR4A1 (ENSHHUG00000032133)	ENSHHUG00000032152	nab2 (ENSHHUG00000032160)	ENSHHUG00000032186	ENSHHUG00000032207	ENSHHUG00000032229	ENSHHUG00000032243	sys1 (ENSHHUG00000032249)	ENSHHUG00000032270	ENSHHUG00000032273	ENSHHUG00000032292	arfgap1 (ENSHHUG00000032313)	ENSHHUG00000032330	ENSHHUG00000032362
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	28													ENSGT00940000160056.a.b #17	ENSGT00950000182908.B.c.b.a #18	ENSGT00940000161155.q #20	ENSGT00530000063647.B.j.a #22	ENSGT00940000157144.c.b.d #37	ENSGT00530000063734.b.d	ENSGT00950000183038.a.b.a.h.a	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b.q.b	ENSGT00940000156832.hb	ENSGT00390000002174.a.o	ENSGT00950000183178.a.u	ENSGT01030000235094.c	ENSGT00390000013978.d.e #14	ENSGT00390000001138.a.p	ENSGT00730000111107.d	ENSGT00390000016940.c.a.a.b	ENSGT01100000263484.B.b.a.d	ENSGT01030000234550.a.b.a
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00940000159931.a	ENSGT00940000158061.a.b	ENSGT00950000183072.b.a.c	ENSGT00940000157629.o	ENSGT00940000160106.r	ENSGT00390000000685.db.b	ENSGT00610000087489.b	ENSGT00950000182882.A.a.i.b.d	ENSGT00390000008169.d	ENSGT00940000154610.e.b.a.c	ENSGT00940000154657.C.g.b	ENSGT00390000006813.h.b.b #16	ENSGT00940000160056.a.b #17	ENSGT00950000182908.B.c.b.a #18	ENSGT00940000161155.q #20	ENSGT00530000063647.B.j.a #22	ENSGT00940000157144.c.b.d #37	ENSGT00530000063734.b.d	ENSGT00950000183038.a.b.a.h.a	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b.q.b	ENSGT00940000156832.hb	ENSGT00390000002174.a.o	ENSGT00950000183178.a.u	ENSGT01030000235094.c	ENSGT00390000013978.d.e #14	ENSGT00390000001138.a.p	ENSGT00730000111107.d	ENSGT00390000016940.c.a.a.b	ENSGT01100000263484.B.b.a.d	ENSGT01030000234550.a.b.a
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000159931.a	ENSGT00940000158061.a.b	ENSGT00950000183072.b.a.c	ENSGT00940000157629.o	ENSGT00940000160106.r	ENSGT00390000000685.db.b	ENSGT00610000087489.b	ENSGT00950000182882.A.a.i.b.d	ENSGT00390000008169.d	ENSGT00940000154610.e.b.a.c	ENSGT00940000154657.C.g.b	ENSGT00390000006813.h.b.b #16	ENSGT00940000160056.a.b #17	ENSGT00950000182908.B.c.b.a #18	ENSGT00940000161155.q #20	ENSGT00530000063647.B.j.a #22	ENSGT00940000157144.c.b.d #37	ENSGT00530000063734.b.d	ENSGT00950000183038.a.b.a.h.a	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b.q.b	ENSGT00940000156832.hb	ENSGT00390000002174.a.o	ENSGT00950000183178.a.u	ENSGT01030000235094.c	ENSGT00390000013978.d.e #14	ENSGT00390000001138.a.p	ENSGT00730000111107.d	ENSGT00390000016940.c.a.a.b	ENSGT01100000263484.B.b.a.d	ENSGT01030000234550.a.b.a
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000065441	ENSSSAG00000065062	ENSSSAG00000064907	itga5 (ENSSSAG00000120022)	ENSSSAG00000108117	CSRNP2 (ENSSSAG00000063985)	TFCP2 (ENSSSAG00000059695)	pou6f1 (ENSSSAG00000059577)	dazap2 (ENSSSAG00000083066)	bin2a (ENSSSAG00000059512)	ENSSSAG00000059485	ENSSSAG00000059411	ENSSSAG00000090576	COQ10A (ENSSSAG00000056467) #17	ANKRD52 (ENSSSAG00000056140) #18	rnf41 (ENSSSAG00000088775) #22	SLC39A5 (ENSSSAG00000056112) #20	dgkaa (ENSSSAG00000045405) #37	tamalin (ENSSSAG00000045128)	nr4a1 (ENSSSAG00000111699)	zgc:56699 (ENSSSAG00000045078)	letmd1 (ENSSSAG00000044959)	cd63 (ENSSSAG00000044857)	ENSSSAG00000043998	IL23p19a (ENSSSAG00000044830)	ENSSSAG00000056533 #16	ENSSSAG00000044813	ENSSSAG00000092200	ENSSSAG00000044450	ENSSSAG00000044441	ENSSSAG00000044436
River trout	MODERN SPECIES	20	slc48a1a (ENSSTUG00000003501)	RAPGEF3 (ENSSTUG00000003581)	itga5 (ENSSTUG00000004713)	CSRNP2 (ENSSTUG00000004945)	TFCP2 (ENSSTUG00000005019)	pou6f1 (ENSSTUG00000006154)	dazap2 (ENSSTUG00000006172)	ENSSTUG00000006179	bin2a (ENSSTUG00000006191)	ENSSTUG00000006208	racgap1 (ENSSTUG00000006238)	cs (ENSSTUG00000006548) #16	COQ10A (ENSSTUG00000006747) #17	ankrd52a (ENSSTUG00000006812) #18	SLC39A5 (ENSSTUG00000007838) #20	rnf41 (ENSSTUG00000007850) #22	dgkaa (ENSSTUG00000007938) #37	tamalin (ENSSTUG00000009468)	nr4a1 (ENSSTUG00000009478)	ENSSTUG00000009487	zgc:56699 (ENSSTUG00000009496)	letmd1 (ENSSTUG00000009510)	cd63 (ENSSTUG00000009536)	nemp1 (ENSSTUG00000009561)	ormdl2 (ENSSTUG00000009577)	ENSSTUG00000009596	PAN2 (ENSSTUG00000009632) #14	ENSSTUG00000010511	pym1 (ENSSTUG00000010518)	ENSSTUG00000010543	ENSSTUG00000010550
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000159931.a	ENSGT00940000158061.a.b	ENSGT00950000183072.b.a.c	ENSGT00940000157629.o	ENSGT00940000160106.r	ENSGT00390000000685.db.b	ENSGT00610000087489.b	ENSGT00950000182882.A.a.i.b.d	ENSGT00390000008169.d	ENSGT00940000154610.e.b.a.c	ENSGT00940000154657.C.g.b	ENSGT00390000006813.h.b.b #16	ENSGT00940000160056.a.b #17	ENSGT00950000182908.B.c.b.a #18	ENSGT00940000161155.q #20	ENSGT00530000063647.B.j.a #22	ENSGT00940000157144.c.b.d #37	ENSGT00530000063734.b.d	ENSGT00950000183038.a.b.a.h.a	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b.q.b	ENSGT00940000156832.hb	ENSGT00390000002174.a.o	ENSGT00950000183178.a.u	ENSGT01030000235094.c	ENSGT00390000013978.d.e #14	ENSGT00390000001138.a.p	ENSGT00730000111107.d	ENSGT00390000016940.c.a.a.b	ENSGT01100000263484.B.b.a.d	ENSGT01030000234550.a.b.a
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000024055	itga5 (ENSOMYG00000023559)	CSRNP2 (ENSOMYG00000023329)	ENSOMYG00000023319	TFCP2 (ENSOMYG00000022229)	pou6f1 (ENSOMYG00000021998)	dazap2 (ENSOMYG00000021982)	ENSOMYG00000061858	bin2a (ENSOMYG00000021943)	racgap1 (ENSOMYG00000021905)	ENSOMYG00000021873	cs (ENSOMYG00000021748) #16	COQ10A (ENSOMYG00000021734) #17	ankrd52a (ENSOMYG00000021534) #18	SLC39A5 (ENSOMYG00000021414) #20	rnf41 (ENSOMYG00000021397) #22	dgkaa (ENSOMYG00000020246) #37	tamalin (ENSOMYG00000020128)	nr4a1 (ENSOMYG00000020125)	zgc:56699 (ENSOMYG00000020119)	letmd1 (ENSOMYG00000020104)	cd63 (ENSOMYG00000020079)	nemp1 (ENSOMYG00000020056)	ormdl2 (ENSOMYG00000020045)	ENSOMYG00000020036	ENSOMYG00000020026 #14	ENSOMYG00000072651	ENSOMYG00000020019	ENSOMYG00000020010	ENSOMYG00000019999	ENSOMYG00000019994
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000159931.a	ENSGT00940000158061.a.b	ENSGT00950000183072.b.a.c	ENSGT00940000157629.o	ENSGT00940000160106.r	ENSGT00390000000685.db.b	ENSGT00610000087489.b	ENSGT00950000182882.A.a.i.b.d	ENSGT00390000008169.d	ENSGT00940000154610.e.b.a.c	ENSGT00940000154657.C.g.b	ENSGT00390000006813.h.b.b #16	ENSGT00940000160056.a.b #17	ENSGT00950000182908.B.c.b.a #18	ENSGT00940000161155.q #20	ENSGT00530000063647.B.j.a #22	ENSGT00940000157144.c.b.d #37	ENSGT00530000063734.b.d	ENSGT00950000183038.a.b.a.h.a	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b.q.b	ENSGT00940000156832.hb	ENSGT00390000002174.a.o	ENSGT00950000183178.a.u	ENSGT01030000235094.c	ENSGT00390000013978.d.e #14	ENSGT00390000001138.a.p	ENSGT00730000111107.d	ENSGT00390000016940.c.a.a.b	ENSGT01100000263484.B.b.a.d	ENSGT01030000234550.a.b.a
Coho salmon	MODERN SPECIES	8	RAPGEF3 (ENSOKIG00005019476)	itga5 (ENSOKIG00005019139)	CSRNP2 (ENSOKIG00005019035)	TFCP2 (ENSOKIG00005017683)	pou6f1 (ENSOKIG00005017537)	dazap2 (ENSOKIG00005017527)	ENSOKIG00005017519	bin2a (ENSOKIG00005017489)	ENSOKIG00005015173	racgap1 (ENSOKIG00005015120)	ENSOKIG00005015043	cs (ENSOKIG00005014970) #16	COQ10A (ENSOKIG00005014957) #17	ankrd52a (ENSOKIG00005014499) #18	SLC39A5 (ENSOKIG00005014437) #20	rnf41 (ENSOKIG00005014418) #22	dgkaa (ENSOKIG00005014261) #37	tamalin (ENSOKIG00005014228)	nr4a1 (ENSOKIG00005014219)	zgc:56699 (ENSOKIG00005014206)	ENSOKIG00005014199	ENSOKIG00005014152	nemp1 (ENSOKIG00005014122)	ormdl2 (ENSOKIG00005014091)	ENSOKIG00005014079	PAN2 (ENSOKIG00005014062) #14	ENSOKIG00005014029	PYM1 (ENSOKIG00005014008)	ENSOKIG00005013989	ENSOKIG00005013981	ENSOKIG00005013973
Chinook salmon	MODERN SPECIES	7	RAPGEF3 (ENSOTSG00005005370)	itga5 (ENSOTSG00005005244)	CSRNP2 (ENSOTSG00005005236)	TFCP2 (ENSOTSG00005004741)	pou6f1 (ENSOTSG00005004725)	dazap2 (ENSOTSG00005004722)	ENSOTSG00005004720	bin2a (ENSOTSG00005004718)	ENSOTSG00005004714	racgap1 (ENSOTSG00005004709)	ENSOTSG00005004702	cs (ENSOTSG00005004688) #16	COQ10A (ENSOTSG00005004684) #17	ankrd52a (ENSOTSG00005004640) #18	SLC39A5 (ENSOTSG00005004632) #20	rnf41 (ENSOTSG00005004631) #22	dgkaa (ENSOTSG00005002268) #37	tamalin (ENSOTSG00005002080)	nr4a1 (ENSOTSG00005011146)	zgc:56699 (ENSOTSG00005011142)	letmd1 (ENSOTSG00005011139)	cd63 (ENSOTSG00005011108)	nemp1 (ENSOTSG00005011106)	ormdl2 (ENSOTSG00005011104)	ENSOTSG00005011103	PAN2 (ENSOTSG00005011102) #14	ENSOTSG00005011099	pym1 (ENSOTSG00005011098)	ENSOTSG00005011097	ENSOTSG00005011096	slc13a3 (ENSOTSG00005011046)
Huchen	MODERN SPECIES	1714													COQ10A (ENSHHUG00000034199) #17	ankrd52a (ENSHHUG00000034202) #18	SLC39A5 (ENSHHUG00000034233) #20	rnf41 (ENSHHUG00000034241) #22	dgkaa (ENSHHUG00000034267) #37	tamalin (ENSHHUG00000034522)	nr4a1 (ENSHHUG00000034529)	zgc:56699 (ENSHHUG00000034537)	letmd1 (ENSHHUG00000034551)	cd63 (ENSHHUG00000034558)	nemp1 (ENSHHUG00000034612)	ormdl2 (ENSHHUG00000034628)	ENSHHUG00000034660	PAN2 (ENSHHUG00000034662) #14
Salmoninae	ANCESTRAL SPECIES	10	ENSGT00940000158061.a.a	ENSGT00950000183072.b.a.d	ENSGT00940000157629.p	ENSGT00940000160106.q	ENSGT00390000000685.db.a	ENSGT00610000087489.a	ENSGT00390000000685.eb	ENSGT00950000182882.A.a.i.b.c	ENSGT00390000008169.c	ENSGT00940000154610.e.b.a.d	ENSGT00940000154657.C.g.a	ENSGT00390000006813.h.b.a #16	ENSGT00940000160056.a.a #17	ENSGT00950000182908.B.c.b.b #18	ENSGT00940000161155.r #20	ENSGT00530000063647.B.j.b #22	ENSGT00940000157144.c.b.c #37	ENSGT00530000063734.b.c	ENSGT00950000183038.a.b.a.h.b	ENSGT00390000010523.d	ENSGT00950000183167.a.b.b.b.q.a	ENSGT00940000156832.ib	ENSGT00390000002174.a.p	ENSGT00950000183178.a.v	ENSGT01030000235094.d	ENSGT00390000013978.d.f #14	ENSGT00390000001138.a.o	ENSGT00730000111107.c	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a.a	ENSGT01100000263484.B.b.a.c
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00940000158061.a.a	ENSGT00950000183072.b.a.d	ENSGT00940000157629.p	ENSGT00940000160106.q	ENSGT00390000000685.db.a	ENSGT00610000087489.a	ENSGT00390000000685.eb	ENSGT00950000182882.A.a.i.b.c	ENSGT00390000008169.c	ENSGT00940000154610.e.b.a.d	ENSGT00940000154657.C.g.a	ENSGT00390000006813.h.b.a #16	ENSGT00940000160056.a.a #17	ENSGT00950000182908.B.c.b.b #18	ENSGT00940000161155.r #20	ENSGT00530000063647.B.j.b #22	ENSGT00940000157144.c.b.c #37	ENSGT00530000063734.b.c	ENSGT00950000183038.a.b.a.h.b	ENSGT00390000010523.d	ENSGT00950000183167.a.b.b.b.q.a	ENSGT00940000156832.ib	ENSGT00390000002174.a.p	ENSGT00950000183178.a.v	ENSGT01030000235094.d	ENSGT00390000013978.d.f #14	ENSGT00390000001138.a.o	ENSGT00730000111107.c	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a.a	ENSGT01100000263484.B.b.a.c
Salmo	ANCESTRAL SPECIES	4	ENSGT00940000159931.b	ENSGT00940000158061.a.a	ENSGT00950000183072.b.a.d	ENSGT00940000157629.p	ENSGT00940000160106.q	ENSGT00390000000685.db.a	ENSGT00610000087489.a	ENSGT00950000182882.A.a.i.b.c	ENSGT00390000008169.c	ENSGT00940000154610.e.b.a.d	ENSGT00940000154657.C.g.a	ENSGT00390000006813.h.b.a #16	ENSGT00940000160056.a.a #17	ENSGT00950000182908.B.c.b.b #18	ENSGT00940000161155.r #20	ENSGT00530000063647.B.j.b #22	ENSGT00940000157144.c.b.c #37	ENSGT00530000063734.b.c	ENSGT00950000183038.a.b.a.h.b	ENSGT00390000010523.d	ENSGT00950000183167.a.b.b.b.q.a	ENSGT00940000156832.ib	ENSGT00390000002174.a.p	ENSGT00950000183178.a.v	ENSGT01030000235094.d	ENSGT00390000013978.d.f #14	ENSGT00390000001138.a.o	ENSGT00730000111107.c	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a.a	ENSGT01100000263484.B.b.a.c
River trout	MODERN SPECIES	23	itga5 (ENSSTUG00000030861)	ENSSTUG00000003191	CSRNP2 (ENSSTUG00000003386)	TFCP2 (ENSSTUG00000003656)	pou6f1 (ENSSTUG00000004280)	dazap2 (ENSSTUG00000004324)	ENSSTUG00000004329	bin2a (ENSSTUG00000004337)	ENSSTUG00000004358	racgap1 (ENSSTUG00000004396)	ENSSTUG00000004879	cs (ENSSTUG00000004926) #16	ankrd52a (ENSSTUG00000005104) #18	COQ10A (ENSSTUG00000005230) #17	SLC39A5 (ENSSTUG00000005238) #20	rnf41 (ENSSTUG00000005246) #22	dgkaa (ENSSTUG00000005377) #37	tamalin (ENSSTUG00000009291)	nr4a1 (ENSSTUG00000009295)	rprm3 (ENSSTUG00000009298)	letmd1 (ENSSTUG00000009301)	cd63 (ENSSTUG00000009341)	nemp1 (ENSSTUG00000009364)	ormdl2 (ENSSTUG00000009402)	ENSSTUG00000009426	PAN2 (ENSSTUG00000009439) #14	SPATS2 (ENSSTUG00000009518)	pym1 (ENSSTUG00000009541)	MMP19 (ENSSTUG00000009554)	ENSSTUG00000009598	ENSSTUG00000009600
Atlantic salmon	MODERN SPECIES	4	itga5 (ENSSSAG00000098283)	ENSSSAG00000119993	CSRNP2 (ENSSSAG00000107736)	TFCP2 (ENSSSAG00000077083)	pou6f1 (ENSSSAG00000121468)	ENSSSAG00000077157	dazap2 (ENSSSAG00000077154)	bin2a (ENSSSAG00000077163)	ENSSSAG00000077167	racgap1 (ENSSSAG00000077176)	ENSSSAG00000108352	cs (ENSSSAG00000077290) #16	COQ10A (ENSSSAG00000038885) #17	ankrd52a (ENSSSAG00000039050) #18	SLC39A5 (ENSSSAG00000041312) #20	rnf41 (ENSSSAG00000041321) #22	ENSSSAG00000113527	dgkaa (ENSSSAG00000041397) #37	ENSSSAG00000100577	nr4a1 (ENSSSAG00000043837)	rprm3 (ENSSSAG00000086971)	letmd1 (ENSSSAG00000043872)	CD63 (ENSSSAG00000043967)	nemp1 (ENSSSAG00000044844)	ENSSSAG00000112611	ormdl2 (ENSSSAG00000044008)	ENSSSAG00000044054	pan2 (ENSSSAG00000044079) #14	ENSSSAG00000044151	ENSSSAG00000086966	ENSSSAG00000108625
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00940000159931.b	ENSGT00940000158061.a.a	ENSGT00950000183072.b.a.d	ENSGT00940000157629.p	ENSGT00940000160106.q	ENSGT00390000000685.eb	ENSGT00610000087489.a	ENSGT00950000182882.A.a.i.b.c	ENSGT00390000008169.c	ENSGT00940000154610.e.b.a.d	ENSGT00940000154657.C.g.a	ENSGT00390000006813.h.b.a #16	ENSGT00940000160056.a.a #17	ENSGT00950000182908.B.c.b.b #18	ENSGT00940000161155.r #20	ENSGT00530000063647.B.j.b #22	ENSGT00940000157144.c.b.c #37	ENSGT00530000063734.b.c	ENSGT00950000183038.a.b.a.h.b	ENSGT00390000010523.d	ENSGT00950000183167.a.b.b.b.q.a	ENSGT00940000156832.ib	ENSGT00390000002174.a.p	ENSGT00950000183178.a.v	ENSGT01030000235094.d	ENSGT00390000013978.d.f #14	ENSGT00390000001138.a.o	ENSGT00730000111107.c	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a.a	ENSGT01100000263484.B.b.a.c
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00940000159931.b	ENSGT00940000158061.a.a	ENSGT00950000183072.b.a.d	ENSGT00940000157629.p	ENSGT00940000160106.q	ENSGT00390000000685.eb	ENSGT01020000234446	ENSGT00950000182882.A.a.i.b.c	ENSGT00390000008169.c	ENSGT00940000154610.e.b.a.d	ENSGT00940000154657.C.g.a	ENSGT00390000006813.h.b.a #16	ENSGT00940000160056.a.a #17	ENSGT00950000182908.B.c.b.b #18	ENSGT00940000161155.r #20	ENSGT00530000063647.B.j.b #22	ENSGT00940000157144.c.b.c #37	ENSGT00530000063734.b.c	ENSGT00950000183038.a.b.a.h.b	ENSGT00390000010523.d	ENSGT00950000183167.a.b.b.b.q.a	ENSGT00940000156832.ib	ENSGT00390000002174.a.p	ENSGT00950000183178.a.v	ENSGT01030000235094.d	ENSGT00390000013978.d.f #14	ENSGT00390000001138.a.o	ENSGT00730000111107.c	ENSGT00940000158593.b	ENSGT00390000016940.c.a.a.a	ENSGT01100000263484.B.b.a.c
Chinook salmon	MODERN SPECIES	14	slc48a1a (ENSOTSG00005013092)	RAPGEF3 (ENSOTSG00005013105)	itga5 (ENSOTSG00005013875)	CSRNP2 (ENSOTSG00005013877)	TFCP2 (ENSOTSG00005013878)	pou6f1 (ENSOTSG00005013945)	dazap2 (ENSOTSG00005013946)	ENSOTSG00005013947	bin2a (ENSOTSG00005013948)	ENSOTSG00005013949	racgap1 (ENSOTSG00005013951)	ENSOTSG00005014294	cs (ENSOTSG00005014295) #16	COQ10A (ENSOTSG00005014296) #17	SLC39A5 (ENSOTSG00005014298) #20	rnf41 (ENSOTSG00005014299) #22	dgkaa (ENSOTSG00005014315) #37	ENSOTSG00005024917	nr4a1 (ENSOTSG00005024919)	rprm3 (ENSOTSG00005024923)	letmd1 (ENSOTSG00005024924)	cd63 (ENSOTSG00005024928)	nemp1 (ENSOTSG00005024935)	ENSOTSG00005024936	ENSOTSG00005024938	PAN2 (ENSOTSG00005024943) #14	SPATS2 (ENSOTSG00005025007)	pym1 (ENSOTSG00005025009)	MMP19 (ENSOTSG00005025012)	ENSOTSG00005025013	ENSOTSG00005025014
Coho salmon	MODERN SPECIES	16	itga5 (ENSOKIG00005029763)	CSRNP2 (ENSOKIG00005030428)	TFCP2 (ENSOKIG00005030471)	pou6f1 (ENSOKIG00005030694)	dazap2 (ENSOKIG00005030705)	ENSOKIG00005030711	ENSOKIG00005030716	bin2a (ENSOKIG00005030724)	ENSOKIG00005030827	racgap1 (ENSOKIG00005030889)	ENSOKIG00005031052	cs (ENSOKIG00005031086) #16	COQ10A (ENSOKIG00005031126) #17	ankrd52a (ENSOKIG00005031151) #18	SLC39A5 (ENSOKIG00005031204) #20	rnf41 (ENSOKIG00005031217) #22	dgkaa (ENSOKIG00005031463) #37	ENSOKIG00005034542	ENSOKIG00005034547	tamalin (ENSOKIG00005034556)	nr4a1 (ENSOKIG00005034566)	rprm3 (ENSOKIG00005034574)	letmd1 (ENSOKIG00005034588)	cd63 (ENSOKIG00005034797)	nemp1 (ENSOKIG00005034830)	ormdl2 (ENSOKIG00005034844)	ENSOKIG00005034895	PAN2 (ENSOKIG00005034956) #14	SPATS2 (ENSOKIG00005035038)	pym1 (ENSOKIG00005035062)	MMP19 (ENSOKIG00005035084)
Rainbow trout	MODERN SPECIES	7	itga5 (ENSOMYG00000025626)	CSRNP2 (ENSOMYG00000075705)	TFCP2 (ENSOMYG00000026186)	pou6f1 (ENSOMYG00000026275)	dazap2 (ENSOMYG00000026265)	ENSOMYG00000026288	bin2a (ENSOMYG00000026296)	ENSOMYG00000057921	ENSOMYG00000026308	racgap1 (ENSOMYG00000026397)	ENSOMYG00000026594	cs (ENSOMYG00000026614) #16	COQ10A (ENSOMYG00000026648) #17	ankrd52a (ENSOMYG00000026696) #18	SLC39A5 (ENSOMYG00000026771) #20	rnf41 (ENSOMYG00000026794) #22	dgkaa (ENSOMYG00000028012) #37	tamalin (ENSOMYG00000066854)	nr4a1 (ENSOMYG00000032851)	ENSOMYG00000061206	ENSOMYG00000052114	rprm3 (ENSOMYG00000032859)	letmd1 (ENSOMYG00000032868)	cd63 (ENSOMYG00000032907)	nemp1 (ENSOMYG00000032929)	ormdl2 (ENSOMYG00000032937)	IL23p19a (ENSOMYG00000032982)	ENSOMYG00000033069 #14	ENSOMYG00000033122	ENSOMYG00000033143	ENSOMYG00000033163
Huchen	MODERN SPECIES	59				ENSHHUG00000028738	TFCP2 (ENSHHUG00000028743)	pou6f1 (ENSHHUG00000028902)	dazap2 (ENSHHUG00000028907)	bin2a (ENSHHUG00000028912)	ENSHHUG00000028923	racgap1 (ENSHHUG00000028929)	ENSHHUG00000028933	cs (ENSHHUG00000028939) #16	COQ10A (ENSHHUG00000028986) #17	ankrd52a (ENSHHUG00000028992) #18	SLC39A5 (ENSHHUG00000028999) #20	rnf41 (ENSHHUG00000029011) #22	dgkaa (ENSHHUG00000029024) #37	tamalin (ENSHHUG00000029585)	nr4a1 (ENSHHUG00000029590)	rprm3 (ENSHHUG00000029595)	letmd1 (ENSHHUG00000029599)	cd63 (ENSHHUG00000029647)	nemp1 (ENSHHUG00000029673)	ENSHHUG00000029682	ENSHHUG00000029684	ENSHHUG00000029693	PAN2 (ENSHHUG00000029698) #14	SPATS2 (ENSHHUG00000029781)	pym1 (ENSHHUG00000029786)	MMP19 (ENSHHUG00000029794)	ENSHHUG00000029811
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00530000063647.B.k #22
P. kingsleyae	MODERN SPECIES	106							CSRNP2 (ENSPKIG00000003188)	TFCP2 (ENSPKIG00000003230)	DAZAP2 (ENSPKIG00000003308)	bin2b (ENSPKIG00000003328)	cnpy2 (ENSPKIG00000003354)	cs (ENSPKIG00000003390) #16	COQ10A (ENSPKIG00000003435) #17	ANKRD52 (ENSPKIG00000003472) #18	NABP2 (ENSPKIG00000003530) #21	rnf41 (ENSPKIG00000003555) #22	DGKA (ENSPKIG00000003632) #37	nr4a1 (ENSPKIG00000003793)	ENSPKIG00000003863	nab2 (ENSPKIG00000003895)	ENSPKIG00000003910	PAN2 (ENSPKIG00000003973) #14	ENSPKIG00000004075	mcrs1 (ENSPKIG00000004109)	ENSPKIG00000004162	suox (ENSPKIG00000004195) #33	MMP19 (ENSPKIG00000004215)	ENSPKIG00000004231	timeless (ENSPKIG00000004370) #10	prph (ENSPKIG00000004728)	tuba1a (ENSPKIG00000004792)
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	12	ENSGT00940000159931	ENSGT00940000158061.a	ENSGT00950000183072.b.a.e	ENSGT00940000157629.k	ENSGT00940000160106	ENSGT00390000000685.jb	ENSGT00610000087489	ENSGT00950000182882.A.a.i.b	ENSGT00390000008169	ENSGT00940000154610.e.b	ENSGT00940000154657.C	ENSGT00390000006813.a.a #16	ENSGT00940000160056 #17	ENSGT00950000182908.B.c.b #18	ENSGT00940000161155 #20	ENSGT00530000063647.B.l.a #22	ENSGT00940000157144.c.b #37	ENSGT00530000063734.b	ENSGT00950000183038.a.b.a.i	ENSGT00940000164745	ENSGT00950000183167.a.b.b.b	ENSGT00940000156832	ENSGT00390000006330.a.b.j	ENSGT00390000002174.a	ENSGT00940000155637.gb	ENSGT00950000183178.a	ENSGT01030000235094	ENSGT00390000001138.a.k	ENSGT00730000111107	ENSGT00940000158593.a.b	ENSGT00390000016940.c.a.a.c
P. kingsleyae	MODERN SPECIES	77	ENSPKIG00000016067	ENSPKIG00000016170	ENSPKIG00000016199	si:dkey-19e4.5 (ENSPKIG00000016249)	LHFPL4 (ENSPKIG00000016286)	ENSPKIG00000016299	CPNE9 (ENSPKIG00000016338)	ENSPKIG00000016404	KLF15 (ENSPKIG00000016423)	SLC41A3 (ENSPKIG00000016455)	ENSPKIG00000016518	CS (ENSPKIG00000016543) #16	COQ10A (ENSPKIG00000016600) #17	ankrd52a (ENSPKIG00000016673) #18	SLC39A5 (ENSPKIG00000016771) #20	RNF41 (ENSPKIG00000016797) #22	dgkaa (ENSPKIG00000016878) #37	tamalin (ENSPKIG00000016990)	nr4a1 (ENSPKIG00000017017)	zgc:56699 (ENSPKIG00000017039)	ALAS1 (ENSPKIG00000017065)	DUSP7 (ENSPKIG00000017098)	ENSPKIG00000017158	slc6a1a (ENSPKIG00000017271)	VGLL4 (ENSPKIG00000017317)	syn2a (ENSPKIG00000017339)	TIMP4 (ENSPKIG00000017371)	raf1a (ENSPKIG00000017461)	cnbpa (ENSPKIG00000017562)	zgc:77375 (ENSPKIG00000017599)	ENSPKIG00000017636
Asian bonytongue	MODERN SPECIES	10	slc48a1a (ENSSFOG00015028152)	RAPGEF3 (ENSSFOG00015022138)	itga5 (ENSSFOG00015022112)	CSRNP2 (ENSSFOG00015026829)	TFCP2 (ENSSFOG00015022044)	pou6f1 (ENSSFOG00015030616)	ENSSFOG00015022016	bin2a (ENSSFOG00015021988)	ENSSFOG00015021967	racgap1 (ENSSFOG00015021933)	ENSSFOG00015021895	cs (ENSSFOG00015021871) #16	COQ10A (ENSSFOG00015021857) #17	ankrd52a (ENSSFOG00015021803) #18	SLC39A5 (ENSSFOG00015021738) #20	rnf41 (ENSSFOG00015030315) #22	dgkaa (ENSSFOG00015021673) #37	tamalin (ENSSFOG00015024493)	nr4a1 (ENSSFOG00015021617)	ENSSFOG00015021607	zgc:56699 (ENSSFOG00015021600)	letmd1 (ENSSFOG00015021594)	cd63 (ENSSFOG00015033138)	NAB2 (ENSSFOG00015021557)	nemp1 (ENSSFOG00015021546)	ENSSFOG00015021530	ormdl2 (ENSSFOG00015031858)	ENSSFOG00015021512	SPATS2 (ENSSFOG00015021496)	pym1 (ENSSFOG00015026898)	MMP19 (ENSSFOG00015021455)
Osteoglossiformes	ANCESTRAL SPECIES	17	ENSGT00940000155473.a.a	ENSGT00940000159065.b	ENSGT00940000163428.a.a.a	ENSGT00390000002307.e.b	ENSGT00940000162831	ENSGT00390000002307.f.b.b	ENSGT00940000158061.b	ENSGT00950000183072.b.a.f	ENSGT00940000157629.l	ENSGT00390000000685.kb	ENSGT00950000182882.A.a.i.a	ENSGT00940000164642	ENSGT00390000006813.a.b #16	ENSGT00950000182908.B.c.a #18	ENSGT00940000161079 #21	ENSGT00530000063647.B.l.b #22	ENSGT00940000157144.c.a #37	ENSGT00950000183038.a.b.a.j	ENSGT01020000230633	ENSGT00390000006330.a.b.i	ENSGT00940000155637.fb	ENSGT00390000013978.d #14	ENSGT00940000156785	ENSGT00390000005536	ENSGT00390000001138.a.l	ENSGT00390000003749 #33	ENSGT00940000158593.a.a	ENSGT00390000016940.c.a.a.d	ENSGT00390000015124 #10	ENSGT00940000160203.e	ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b
Asian bonytongue	MODERN SPECIES	14	ENSSFOG00015018766	ENSSFOG00015018743	VDR (ENSSFOG00015018685)	HDAC7 (ENSSFOG00015018601)	ENSSFOG00015018538	slc48a1a (ENSSFOG00015018526)	ITGA5 (ENSSFOG00015018245)	TFCP2 (ENSSFOG00015018165)	dazap2 (ENSSFOG00015018156)	bin2b (ENSSFOG00015018113)	cnpy2 (ENSSFOG00015018098)	cs (ENSSFOG00015018059) #16	COQ10A (ENSSFOG00015031510) #17	ANKRD52 (ENSSFOG00015017991) #18	NABP2 (ENSSFOG00015017976) #21	rnf41 (ENSSFOG00015026475) #22	DGKA (ENSSFOG00015017904) #37	ENSSFOG00015017885	nr4a1 (ENSSFOG00015024850)	ENSSFOG00015028418	ENSSFOG00015017833	nab2 (ENSSFOG00015017818)	ENSSFOG00015017809	PAN2 (ENSSFOG00015017740) #14	ENSSFOG00015017715	mcrs1 (ENSSFOG00015017672)	ENSSFOG00015017659	suox (ENSSFOG00015032568) #33	MMP19 (ENSSFOG00015017641)	ENSSFOG00015033263	timeless (ENSSFOG00015017507) #10
Elephant shark	MODERN SPECIES	2219															ENSCMIG00000002336	rnf41 (ENSCMIG00000002343) #22