Glires	ANCESTRAL SPECIES	4	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00720000108953	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37
Rodentia	ANCESTRAL SPECIES	5	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00940000168978 #16	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00720000108953	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37
Rodentia_A	ANCESTRAL SPECIES	4	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00940000168978 #16	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00720000108953	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37
Sciuridae	ANCESTRAL SPECIES	15	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00940000168978 #16	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b
Eurasian red squirrel	MODERN SPECIES	14	SCAF11 (ENSSVLG00005007909) #7	ARID2 (ENSSVLG00005007791) #8	EEF2 (ENSSVLG00005007723) #9	ANO6 (ENSSVLG00005007489) #10	DBX2 (ENSSVLG00005007393) #11	NELL2 (ENSSVLG00005007103) #12	TMEM117 (ENSSVLG00005006963) #13	TWF1 (ENSSVLG00005006901) #14	IRAK4 (ENSSVLG00005006847) #15	ENSSVLG00005024271 #16	PUS7L (ENSSVLG00005024211) #17	ADAMTS20 (ENSSVLG00005024057) #18	ENSSVLG00005024012 #19	PPHLN1 (ENSSVLG00005023941) #20	ZCRB1 (ENSSVLG00005023866) #21	YAF2 (ENSSVLG00005023809) #22	GXYLT1 (ENSSVLG00005023725) #23	ENSSVLG00005023701 #24	ENSSVLG00005023688 #25	PDZRN4 (ENSSVLG00005023595) #26	CNTN1 (ENSSVLG00005023245) #27	ENSSVLG00005023091 #28	LRRK2 (ENSSVLG00005023045) #29	SLC2A13 (ENSSVLG00005022999) #30	C12orf40 (ENSSVLG00005022853) #31	ABCD2 (ENSSVLG00005022770) #32	KIF21A (ENSSVLG00005021698) #33	CPNE8 (ENSSVLG00005021341) #34	ENSSVLG00005021292 #35	SYT10 (ENSSVLG00005021217) #36	PKP2 (ENSSVLG00005021133) #37
Marmotini	ANCESTRAL SPECIES	19	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765
Marmotini_b	ANCESTRAL SPECIES	11	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.y.a ##21	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00910000146950	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504
Arctic ground squirrel	MODERN SPECIES	246				DBX2 (ENSUPAG00010000838) #11	NELL2 (ENSUPAG00010000852) #12	TMEM117 (ENSUPAG00010000895) #13	TWF1 (ENSUPAG00010000907) #14	IRAK4 (ENSUPAG00010000917) #15	PUS7L (ENSUPAG00010000957) #17	ENSUPAG00010000982	ADAMTS20 (ENSUPAG00010000990) #18	ENSUPAG00010001109	PRICKLE1 (ENSUPAG00010001130) #19	PPHLN1 (ENSUPAG00010001163) #20	ZCRB1 (ENSUPAG00010001247) #21	YAF2 (ENSUPAG00010001259) #22	GXYLT1 (ENSUPAG00010001274) #23
Squirrel	MODERN SPECIES	112	SLC38A2 (ENSSTOG00000016307)	SLC38A1 (ENSSTOG00000016301)	SCAF11 (ENSSTOG00000004902) #7	ARID2 (ENSSTOG00000008936) #8	ANO6 (ENSSTOG00000024923) #10	DBX2 (ENSSTOG00000000232) #11	NELL2 (ENSSTOG00000019850) #12	TMEM117 (ENSSTOG00000025184) #13	TWF1 (ENSSTOG00000006470) #14	IRAK4 (ENSSTOG00000013841) #15	PUS7L (ENSSTOG00000006445) #17	ADAMTS20 (ENSSTOG00000012059) #18	PRICKLE1 (ENSSTOG00000011379) #19	PPHLN1 (ENSSTOG00000007257) #20	ENSSTOG00000034477 ##21	YAF2 (ENSSTOG00000007224) #22	GXYLT1 (ENSSTOG00000027389) #23	PDZRN4 (ENSSTOG00000013228) #26
Alpin marmot	MODERN SPECIES	34	SLC38A2 (ENSMMMG00000022659)	SLC38A1 (ENSMMMG00000022650)	SCAF11 (ENSMMMG00000022640) #7	ARID2 (ENSMMMG00000022637) #8	ANO6 (ENSMMMG00000022622) #10	DBX2 (ENSMMMG00000022619) #11	NELL2 (ENSMMMG00000022605) #12	TMEM117 (ENSMMMG00000022603) #13	TWF1 (ENSMMMG00000022600) #14	IRAK4 (ENSMMMG00000022596) #15	ENSMMMG00000022591	ADAMTS20 (ENSMMMG00000022568) #18	PRICKLE1 (ENSMMMG00000022552) #19	ENSMMMG00000022546 #20	ZCRB1 (ENSMMMG00000022545) #21	YAF2 (ENSMMMG00000022539) #22	GXYLT1 (ENSMMMG00000022532) #23	ENSMMMG00000022530	PDZRN4 (ENSMMMG00000022528) #26	CNTN1 (ENSMMMG00000022503) #27	LRRK2 (ENSMMMG00000022478) #29	SLC2A13 (ENSMMMG00000022471) #30	ABCD2 (ENSMMMG00000022441) #32	KIF21A (ENSMMMG00000022225) #33	CPNE8 (ENSMMMG00000022203) #34	ENSMMMG00000022193 #35	SYT10 (ENSMMMG00000022187) #36	ENSMMMG00000022176	PKP2 (ENSMMMG00000022136) #37	YARS2 (ENSMMMG00000022130)	DNM1L (ENSMMMG00000022062)
Hystricomorpha	ANCESTRAL SPECIES	9	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00720000108953	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	8	TWF1 (ENSHGLG00000006813) #14	IRAK4 (ENSHGLG00000007796) #15	PUS7L (ENSHGLG00000004083) #17	ENSHGLG00000041765	ADAMTS20 (ENSHGLG00000004720) #18	ENSHGLG00000032813	ENSHGLG00000020234	PRICKLE1 (ENSHGLG00000047115) #19	ENSHGLG00000000293	ENSHGLG00000046097 #20	ENSHGLG00000001417	ENSHGLG00000034923 #20	ENSHGLG00000001325 #21	ENSHGLG00000042057 #22	ENSHGLG00000038728	YAF2 (ENSHGLG00000001299) #22	GXYLT1 (ENSHGLG00000001208) #23	ENSHGLG00000001159	ENSHGLG00000040152	PDZRN4 (ENSHGLG00000049703) #26	ENSHGLG00000007919	ENSHGLG00000047537	CNTN1 (ENSHGLG00000000930) #27	ENSHGLG00000045827	ENSHGLG00000032620 #28	LRRK2 (ENSHGLG00000004477) #29	SLC2A13 (ENSHGLG00000007456) #30	ENSHGLG00000033676 #31	ABCD2 (ENSHGLG00000012569) #32	ENSHGLG00000018960	ENSHGLG00000044300
Naked mole-rat female	MODERN SPECIES	8	ENSHGLG00000046575	TMEM117 (ENSHGLG00000004220) #13	TWF1 (ENSHGLG00000006813) #14	IRAK4 (ENSHGLG00000007796) #15	PUS7L (ENSHGLG00000004083) #17	ENSHGLG00000041765	ADAMTS20 (ENSHGLG00000004720) #18	ENSHGLG00000032813	ENSHGLG00000020234	PRICKLE1 (ENSHGLG00000047115) #19	ENSHGLG00000000293	ENSHGLG00000046097 #20	ENSHGLG00000001417	ENSHGLG00000034923 #20	ENSHGLG00000001325 #21	ENSHGLG00000042057 #22	ENSHGLG00000038728	YAF2 (ENSHGLG00000001299) #22	GXYLT1 (ENSHGLG00000001208) #23	ENSHGLG00000001159	ENSHGLG00000040152	PDZRN4 (ENSHGLG00000049703) #26	ENSHGLG00000007919	ENSHGLG00000047537	CNTN1 (ENSHGLG00000000930) #27	ENSHGLG00000045827	ENSHGLG00000032620 #28	LRRK2 (ENSHGLG00000004477) #29	SLC2A13 (ENSHGLG00000007456) #30	ENSHGLG00000033676 #31	ABCD2 (ENSHGLG00000012569) #32
Hystricomorpha_a	ANCESTRAL SPECIES	7	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27
Guinea pig	MODERN SPECIES	9	SLC38A2 (ENSCPOG00000003746)	SLC38A1 (ENSCPOG00000005301)	SCAF11 (ENSCPOG00000005084) #7	ARID2 (ENSCPOG00000035312) #8	ANO6 (ENSCPOG00000013577) #10	DBX2 (ENSCPOG00000011069) #11	NELL2 (ENSCPOG00000000976) #12	TMEM117 (ENSCPOG00000015520) #13	TWF1 (ENSCPOG00000001499) #14	IRAK4 (ENSCPOG00000001771) #15	PUS7L (ENSCPOG00000001769) #17	ADAMTS20 (ENSCPOG00000005119) #18	PRICKLE1 (ENSCPOG00000005579) #19	PPHLN1 (ENSCPOG00000038546) #20	ZCRB1 (ENSCPOG00000031127) #21	YAF2 (ENSCPOG00000015156) #22	GXYLT1 (ENSCPOG00000000860) #23	ENSCPOG00000021462	PDZRN4 (ENSCPOG00000000372) #26	CNTN1 (ENSCPOG00000008811) #27	ENSCPOG00000037897
Hystricomorpha_b	ANCESTRAL SPECIES	78	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27
Long-tailed chinchilla	MODERN SPECIES	207	SLC38A1 (ENSCLAG00000002175)	SCAF11 (ENSCLAG00000002050) #7	ARID2 (ENSCLAG00000001973) #8	ANO6 (ENSCLAG00000002430) #10	DBX2 (ENSCLAG00000002211) #11	ENSCLAG00000002122	NELL2 (ENSCLAG00000002075) #12	TMEM117 (ENSCLAG00000002010) #13	ENSCLAG00000003492 #14	IRAK4 (ENSCLAG00000002656) #15	PUS7L (ENSCLAG00000002416) #17	ADAMTS20 (ENSCLAG00000005016) #18	PRICKLE1 (ENSCLAG00000003980) #19	PPHLN1 (ENSCLAG00000002867) #20	ZCRB1 (ENSCLAG00000002653) #21	YAF2 (ENSCLAG00000002516) #22	GXYLT1 (ENSCLAG00000003085) #23	PDZRN4 (ENSCLAG00000002906) #26	CNTN1 (ENSCLAG00000010381) #27
Degu	MODERN SPECIES	141	ENSODEG00000003928	ENSODEG00000018973	ENSODEG00000018965	ENSODEG00000003909	ANO6 (ENSODEG00000003814) #10	NELL2 (ENSODEG00000003669) #12	TMEM117 (ENSODEG00000003583) #13	ENSODEG00000003529 #14	ENSODEG00000018930 #16	PUS7L (ENSODEG00000003484) #17	ADAMTS20 (ENSODEG00000003382) #18	PRICKLE1 (ENSODEG00000003320) #19	PPHLN1 (ENSODEG00000003297) #20	ENSODEG00000003268	ENSODEG00000003254	YAF2 (ENSODEG00000004846) #22	GXYLT1 (ENSODEG00000004822) #23	PDZRN4 (ENSODEG00000004788) #26	CNTN1 (ENSODEG00000004694) #27
Rodentia_B	ANCESTRAL SPECIES	3	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504
Kangaroo rat	MODERN SPECIES	361	Slc38a2 (ENSDORG00000007910)	Slc38a1 (ENSDORG00000028155)	Scaf11 (ENSDORG00000002262) #7	Arid2 (ENSDORG00000012273) #8	Ano6 (ENSDORG00000011423) #10	ENSDORG00000008308 #11	Nell2 (ENSDORG00000010044) #12	Tmem117 (ENSDORG00000003811) #13	Twf1 (ENSDORG00000027567) #14	Irak4 (ENSDORG00000015110) #15	Pus7l (ENSDORG00000015109) #17	Adamts20 (ENSDORG00000013168) #18	Prickle1 (ENSDORG00000027614) #19	Pphln1 (ENSDORG00000012760) #20	Zcrb1 (ENSDORG00000025789) #21	Yaf2 (ENSDORG00000024619) #22	Gxylt1 (ENSDORG00000013304) #23	Pdzrn4 (ENSDORG00000029145) #26	Cntn1 (ENSDORG00000004521) #27	Lrrk2 (ENSDORG00000010126) #29
Myomorpha	ANCESTRAL SPECIES	2	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504
Lesser Egyptian jerboa	MODERN SPECIES	89												Prickle1 (ENSJJAG00000011701) #19	ENSJJAG00000014487 #20	ENSJJAG00000021636 #21	ENSJJAG00000023606	Yaf2 (ENSJJAG00000000324) #22	Gxylt1 (ENSJJAG00000010228) #23	ENSJJAG00000020445	ENSJJAG00000023385	Pdzrn4 (ENSJJAG00000000770) #26	ENSJJAG00000013828	ENSJJAG00000015792	Cntn1 (ENSJJAG00000021782) #27	Lrrk2 (ENSJJAG00000013233) #29	Slc2a13 (ENSJJAG00000021456) #30	ENSJJAG00000000818	Abcd2 (ENSJJAG00000006865) #32	Kif21a (ENSJJAG00000001646) #33	Cpne8 (ENSJJAG00000015994) #34	ENSJJAG00000004937	Aak1 (ENSJJAG00000011646)
Muroidea	ANCESTRAL SPECIES	31	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504
Muroidea_A	ANCESTRAL SPECIES	9	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551	ENSGT00940000162430
Cricetidae	ANCESTRAL SPECIES	10	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551	ENSGT00940000162430	ENSGT00940000153561.b.b
Cricetinae	ANCESTRAL SPECIES	3	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551	ENSGT00940000162430	ENSGT00940000153561.b.b	ENSGT00940000157610
Chinese hamster chok1gshd	MODERN SPECIES	1	Ano6 (ENSCGRG00001003724) #10	ENSCGRG00001001693	Dbx2 (ENSCGRG00001002554) #11	Nell2 (ENSCGRG00001001600) #12	Tmem117 (ENSCGRG00001004267) #13	Twf1 (ENSCGRG00001002511) #14	Irak4 (ENSCGRG00001008384) #15	Pus7l (ENSCGRG00001003122) #17	Adamts20 (ENSCGRG00001009652) #18	ENSCGRG00001010157	Prickle1 (ENSCGRG00001022837) #19	ENSCGRG00001022248 #20	Zcrb1 (ENSCGRG00001023392) #21	ENSCGRG00001023638	ENSCGRG00001023773	Yaf2 (ENSCGRG00001021765) #22	Gxylt1 (ENSCGRG00001021374) #23	ENSCGRG00001008965	Pdzrn4 (ENSCGRG00001023763) #26	Cntn1 (ENSCGRG00001023727) #27	Lrrk2 (ENSCGRG00001009933) #29	Slc2a13 (ENSCGRG00001001998) #30	CN725425 (ENSCGRG00001022464) #31	Abcd2 (ENSCGRG00001022101) #32	ENSCGRG00001009308	Kif21a (ENSCGRG00001012403) #33	Cpne8 (ENSCGRG00001023120) #34	Alg10b (ENSCGRG00001023011) #35	Syt10 (ENSCGRG00001022503) #36	Rabl2 (ENSCGRG00001021894)	Acr (ENSCGRG00001010552)
Golden Hamster	MODERN SPECIES	626	ENSMAUG00000010698	ENSMAUG00000010427	Scaf11 (ENSMAUG00000016564) #7	Arid2 (ENSMAUG00000010801) #8	Ano6 (ENSMAUG00000009991) #10	ENSMAUG00000009068	Nell2 (ENSMAUG00000011805) #12	Tmem117 (ENSMAUG00000011415) #13	Twf1 (ENSMAUG00000010896) #14	Irak4 (ENSMAUG00000015813) #15	Pus7l (ENSMAUG00000012622) #17	Adamts20 (ENSMAUG00000012674) #18	Prickle1 (ENSMAUG00000020994) #19	Pphln1 (ENSMAUG00000011738) #20	Zcrb1 (ENSMAUG00000009266) #21	Yaf2 (ENSMAUG00000009658) #22	Gxylt1 (ENSMAUG00000009967) #23	ENSMAUG00000009121	Pdzrn4 (ENSMAUG00000020766) #26	Cntn1 (ENSMAUG00000019116) #27	Lrrk2 (ENSMAUG00000013795) #29	Slc2a13 (ENSMAUG00000012116) #30	CN725425 (ENSMAUG00000010765) #31	Abcd2 (ENSMAUG00000012545) #32	Kif21a (ENSMAUG00000017807) #33	Cpne8 (ENSMAUG00000016239) #34	Alg10b (ENSMAUG00000010415) #35	Syt10 (ENSMAUG00000009924) #36	Rabl2 (ENSMAUG00000010955)	Acr (ENSMAUG00000006612)	Shank3 (ENSMAUG00000018491)
Cricetidae_B	ANCESTRAL SPECIES	6	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551	ENSGT00940000162430	ENSGT00940000153561.b.b
Northern American deer mouse	MODERN SPECIES	12	Arid2 (ENSPEMG00000014806) #8	ENSPEMG00000030605	Ano6 (ENSPEMG00000022036) #10	Dbx2 (ENSPEMG00000021509) #11	Nell2 (ENSPEMG00000021060) #12	ENSPEMG00000024666	Tmem117 (ENSPEMG00000006395) #13	Twf1 (ENSPEMG00000000838) #14	Irak4 (ENSPEMG00000018737) #15	Pus7l (ENSPEMG00000016583) #17	Adamts20 (ENSPEMG00000017664) #18	ENSPEMG00000025295	Prickle1 (ENSPEMG00000013383) #19	ENSPEMG00000030409 #20	Zcrb1 (ENSPEMG00000005293) #21	Yaf2 (ENSPEMG00000000787) #22	Gxylt1 (ENSPEMG00000025095) #23	Pdzrn4 (ENSPEMG00000005226) #26	ENSPEMG00000030528	Cntn1 (ENSPEMG00000001410) #27	Lrrk2 (ENSPEMG00000008690) #29	Slc2a13 (ENSPEMG00000000329) #30	CN725425 (ENSPEMG00000023448) #31	Abcd2 (ENSPEMG00000023925) #32	Kif21a (ENSPEMG00000023536) #33	Cpne8 (ENSPEMG00000021609) #34	Alg10b (ENSPEMG00000025886) #35	Syt10 (ENSPEMG00000017020) #36	ENSPEMG00000025615	Rabl2 (ENSPEMG00000024045)	Acr (ENSPEMG00000021431)
Prairie vole	MODERN SPECIES	2	Eif3d (ENSMOCG00000011605)	Foxred2 (ENSMOCG00000000814)	ENSMOCG00000008815	ENSMOCG00000011921	Myh9 (ENSMOCG00000020713)	Apol8 (ENSMOCG00000010662)	ENSMOCG00000012391	ENSMOCG00000001968	Twf1 (ENSMOCG00000007750) #14	ENSMOCG00000002575 #16	Pus7l (ENSMOCG00000015330) #17	Adamts20 (ENSMOCG00000002582) #18	Prickle1 (ENSMOCG00000011372) #19	Pphln1 (ENSMOCG00000022641) #20	Zcrb1 (ENSMOCG00000011009) #21	Yaf2 (ENSMOCG00000020557) #22	Gxylt1 (ENSMOCG00000011890) #23	Pdzrn4 (ENSMOCG00000021729) #26	Cntn1 (ENSMOCG00000012159) #27	ENSMOCG00000017819	Lrrk2 (ENSMOCG00000003192) #29	Slc2a13 (ENSMOCG00000006751) #30	CN725425 (ENSMOCG00000017400) #31	Abcd2 (ENSMOCG00000021556) #32	Kif21a (ENSMOCG00000008492) #33	Cpne8 (ENSMOCG00000019821) #34	Alg10b (ENSMOCG00000022833) #35	Syt10 (ENSMOCG00000010483) #36	Rabl2 (ENSMOCG00000002775)	Acr (ENSMOCG00000004907)	Shank3 (ENSMOCG00000009362)
Murinae	ANCESTRAL SPECIES	10	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00680000100886	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551
Mus	ANCESTRAL SPECIES	11	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00860000136064	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00680000100886	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551
Mus_A	ANCESTRAL SPECIES	13	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00860000136064	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00680000100886	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551
Ryukyu mouse	MODERN SPECIES	6	Scaf11 (MGP_CAROLIEiJ_G0020205) #7	Arid2 (MGP_CAROLIEiJ_G0020204) #8	MGP_CAROLIEiJ_G0020203	Ano6 (MGP_CAROLIEiJ_G0020202) #10	MGP_CAROLIEiJ_G0020201	MGP_CAROLIEiJ_G0020200 #11	Nell2 (MGP_CAROLIEiJ_G0020199) #12	Tmem117 (MGP_CAROLIEiJ_G0020198) #13	Twf1 (MGP_CAROLIEiJ_G0020197) #14	Irak4 (MGP_CAROLIEiJ_G0020196) #15	Pus7l (MGP_CAROLIEiJ_G0020195) #17	Adamts20 (MGP_CAROLIEiJ_G0020194) #18	Prickle1 (MGP_CAROLIEiJ_G0020193) #19	Pphln1 (MGP_CAROLIEiJ_G0020192) #20	Zcrb1 (MGP_CAROLIEiJ_G0020191) #21	Yaf2 (MGP_CAROLIEiJ_G0020190) #22	Gxylt1 (MGP_CAROLIEiJ_G0020189) #23	MGP_CAROLIEiJ_G0020188 #26	Cntn1 (MGP_CAROLIEiJ_G0020187) #27	MGP_CAROLIEiJ_G0020186	Lrrk2 (MGP_CAROLIEiJ_G0020185) #29	Slc2a13 (MGP_CAROLIEiJ_G0020184) #30	CN725425 (MGP_CAROLIEiJ_G0020183) #31	Abcd2 (MGP_CAROLIEiJ_G0020182) #32	Kif21a (MGP_CAROLIEiJ_G0020181) #33	Cpne8 (MGP_CAROLIEiJ_G0020180) #34	MGP_CAROLIEiJ_G0020179	Alg10b (MGP_CAROLIEiJ_G0020178) #35	Syt10 (MGP_CAROLIEiJ_G0020177) #36	Rabl2 (MGP_CAROLIEiJ_G0020176)	Acr (MGP_CAROLIEiJ_G0020175)
Mus_B	ANCESTRAL SPECIES	12	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00860000136064	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00680000100886	ENSGT00940000164528 #28	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551
Mouse	MODERN SPECIES	6	Slc38a2 (ENSMUSG00000022462)	Slc38a1 (ENSMUSG00000023169)	Scaf11 (ENSMUSG00000033228) #7	Arid2 (ENSMUSG00000033237) #8	Ano6 (ENSMUSG00000064210) #10	Dbx2 (ENSMUSG00000045608) #11	Nell2 (ENSMUSG00000022454) #12	Tmem117 (ENSMUSG00000063296) #13	Twf1 (ENSMUSG00000022451) #14	Irak4 (ENSMUSG00000059883) #15	Pus7l (ENSMUSG00000033356) #17	Adamts20 (ENSMUSG00000022449) #18	Prickle1 (ENSMUSG00000036158) #19	Pphln1 (ENSMUSG00000036167) #20	Zcrb1 (ENSMUSG00000022635) #21	Yaf2 (ENSMUSG00000022634) #22	Gxylt1 (ENSMUSG00000036197) #23	Pdzrn4 (ENSMUSG00000036218) #26	Cntn1 (ENSMUSG00000055022) #27	Muc19 (ENSMUSG00000118670) #28	Smgc (ENSMUSG00000047295)	Lrrk2 (ENSMUSG00000036273) #29	Slc2a13 (ENSMUSG00000036298) #30	CN725425 (ENSMUSG00000078932) #31	Abcd2 (ENSMUSG00000055782) #32	Kif21a (ENSMUSG00000022629) #33	Cpne8 (ENSMUSG00000052560) #34	Alg10b (ENSMUSG00000075470) #35	Syt10 (ENSMUSG00000063260) #36	Rabl2 (ENSMUSG00000022621)	Acr (ENSMUSG00000022622)
Mus_C	ANCESTRAL SPECIES	17	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00860000136064	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228.h.a #20	ENSGT00730000111061.p.z #21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00960000191250	ENSGT00940000155915 #27	ENSGT00680000100886	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000156551	ENSGT00940000162430
Steppe mouse	MODERN SPECIES	2987								Twf1 (ENSMSIG00000021039) #14	Irak4 (ENSMSIG00000020968) #15	Pus7l (ENSMSIG00000020944) #17	Adamts20 (ENSMSIG00000020830) #18	ENSMSIG00000020816	Prickle1 (ENSMSIG00000020783) #19	Pphln1 (ENSMSIG00000020713) #20	Zcrb1 (ENSMSIG00000020661) #21	ENSMSIG00000020648 #22	Gxylt1 (ENSMSIG00000020567) #23
spretus	MODERN SPECIES	6	Scaf11 (MGP_SPRETEiJ_G0021101) #7	Arid2 (MGP_SPRETEiJ_G0021100) #8	MGP_SPRETEiJ_G0021099	Ano6 (MGP_SPRETEiJ_G0021098) #10	MGP_SPRETEiJ_G0021097	Dbx2 (MGP_SPRETEiJ_G0021096) #11	Nell2 (MGP_SPRETEiJ_G0021095) #12	Tmem117 (MGP_SPRETEiJ_G0021094) #13	Twf1 (MGP_SPRETEiJ_G0021093) #14	Irak4 (MGP_SPRETEiJ_G0021092) #15	Pus7l (MGP_SPRETEiJ_G0021091) #17	Adamts20 (MGP_SPRETEiJ_G0021090) #18	Prickle1 (MGP_SPRETEiJ_G0021089) #19	Pphln1 (MGP_SPRETEiJ_G0021088) #20	Zcrb1 (MGP_SPRETEiJ_G0021087) #21	Yaf2 (MGP_SPRETEiJ_G0021086) #22	Gxylt1 (MGP_SPRETEiJ_G0021085) #23	Pdzrn4 (MGP_SPRETEiJ_G0021084) #26	Cntn1 (MGP_SPRETEiJ_G0021083) #27	MGP_SPRETEiJ_G0021082	Lrrk2 (MGP_SPRETEiJ_G0021081) #29	Slc2a13 (MGP_SPRETEiJ_G0021080) #30	CN725425 (MGP_SPRETEiJ_G0021079) #31	Abcd2 (MGP_SPRETEiJ_G0021078) #32	Kif21a (MGP_SPRETEiJ_G0021077) #33	Cpne8 (MGP_SPRETEiJ_G0021076) #34	Alg10b (MGP_SPRETEiJ_G0021075) #35	Syt10 (MGP_SPRETEiJ_G0021074) #36	Rabl2 (MGP_SPRETEiJ_G0021073)	Acr (MGP_SPRETEiJ_G0021072)	Shank3 (MGP_SPRETEiJ_G0021071)
Shrew mouse	MODERN SPECIES	8	Scaf11 (MGP_PahariEiJ_G0020209) #7	Arid2 (MGP_PahariEiJ_G0020208) #8	MGP_PahariEiJ_G0020207	Ano6 (MGP_PahariEiJ_G0020206) #10	MGP_PahariEiJ_G0020205	Dbx2 (MGP_PahariEiJ_G0020204) #11	Nell2 (MGP_PahariEiJ_G0020203) #12	Tmem117 (MGP_PahariEiJ_G0020202) #13	Twf1 (MGP_PahariEiJ_G0020201) #14	Irak4 (MGP_PahariEiJ_G0020200) #15	Pus7l (MGP_PahariEiJ_G0020199) #17	Adamts20 (MGP_PahariEiJ_G0020198) #18	Prickle1 (MGP_PahariEiJ_G0020197) #19	Pphln1 (MGP_PahariEiJ_G0020196) #20	Zcrb1 (MGP_PahariEiJ_G0020195) #21	Yaf2 (MGP_PahariEiJ_G0020194) #22	Gxylt1 (MGP_PahariEiJ_G0020193) #23	Pdzrn4 (MGP_PahariEiJ_G0020192) #26	Cntn1 (MGP_PahariEiJ_G0020191) #27	MGP_PahariEiJ_G0020190	MGP_PahariEiJ_G0020189 #29	Slc2a13 (MGP_PahariEiJ_G0020188) #30	CN725425 (MGP_PahariEiJ_G0020187) #31	Abcd2 (MGP_PahariEiJ_G0020186) #32	Kif21a (MGP_PahariEiJ_G0020185) #33	Cpne8 (MGP_PahariEiJ_G0020184) #34	Alg10b (MGP_PahariEiJ_G0020183) #35	Syt10 (MGP_PahariEiJ_G0020182) #36	Rabl2 (MGP_PahariEiJ_G0020181)	Acr (MGP_PahariEiJ_G0020180)	Shank3 (MGP_PahariEiJ_G0020179)
Rat	MODERN SPECIES	17	Arid2 (ENSRNOG00000004831) #8	ENSRNOG00000067243	Ano6 (ENSRNOG00000006995) #10	Dbx2 (ENSRNOG00000006885) #11	Nell2 (ENSRNOG00000006235) #12	Tmem117 (ENSRNOG00000006068) #13	ENSRNOG00000064416	Twf1 (ENSRNOG00000022507) #14	ENSRNOG00000071195	Irak4 (ENSRNOG00000005965) #15	Pus7l (ENSRNOG00000022570) #17	Adamts20 (ENSRNOG00000033397) #18	Prickle1 (ENSRNOG00000022772) #19	Pphln1 (ENSRNOG00000022778) #20	Zcrb1 (ENSRNOG00000004996) #21	Yaf2 (ENSRNOG00000004773) #22	Gxylt1 (ENSRNOG00000005234) #23	Pdzrn4 (ENSRNOG00000022844) #26	Cntn1 (ENSRNOG00000004438) #27	AABR07058745.1 (ENSRNOG00000050884) #28	AC096792.1 (ENSRNOG00000054624) #28	Smgc (ENSRNOG00000037025)	AC108595.1 (ENSRNOG00000032420)	Lrrk2 (ENSRNOG00000004048) #29	Slc2a13 (ENSRNOG00000015741) #30	C7h12orf40 (ENSRNOG00000025898) #31	Abcd2 (ENSRNOG00000015538) #32	Kif21a (ENSRNOG00000014844) #33	Cpne8 (ENSRNOG00000026128) #34	Alg10 (ENSRNOG00000014511) #35	Syt10 (ENSRNOG00000014296) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1278													Prickle1 (ENSNGAG00000014931) #19	ENSNGAG00000014235 #20	Zcrb1 (ENSNGAG00000020193) #21	Yaf2 (ENSNGAG00000017255) #22	Gxylt1 (ENSNGAG00000015337) #23
Lagomorpha	ANCESTRAL SPECIES	27	ENSGT00940000155486	ENSGT00940000160716	ENSGT00950000183205.b.a.b.a.b #7	ENSGT00390000016138 #8	ENSGT00940000158969 #10	ENSGT00950000183093.A.a #11	ENSGT00810000125439.B #12	ENSGT00390000013052 #13	ENSGT00530000063868.b #14	ENSGT00940000158792 #15	ENSGT00530000063554.b #17	ENSGT00940000158636 #18	ENSGT00940000157529 #19	ENSGT00390000016228 #20	ENSGT00730000111061.p.y.a ##21	ENSGT00390000013995.b.b #22	ENSGT00940000156242 #23	ENSGT00950000183062.a.a.b #26	ENSGT00940000155915 #27	ENSGT00940000158267 #29	ENSGT00940000155870.b #30	ENSGT00390000002848 #31	ENSGT00950000182955.a.b.b #32	ENSGT00940000155323.a #33	ENSGT00940000159679 #34	ENSGT00390000012906 #35	ENSGT00940000158899 #36	ENSGT00940000158677 #37	ENSGT00390000013709.b	ENSGT00940000155504	ENSGT00940000155765
Rabbit	MODERN SPECIES	19	SLC38A2 (ENSOCUG00000009943)	SLC38A1 (ENSOCUG00000005164)	SCAF11 (ENSOCUG00000003899) #7	ARID2 (ENSOCUG00000013306) #8	ANO6 (ENSOCUG00000000185) #10	ENSOCUG00000022068 #11	NELL2 (ENSOCUG00000016727) #12	TMEM117 (ENSOCUG00000004124) #13	TWF1 (ENSOCUG00000004113) #14	IRAK4 (ENSOCUG00000004103) #15	PUS7L (ENSOCUG00000004093) #17	ADAMTS20 (ENSOCUG00000012959) #18	PRICKLE1 (ENSOCUG00000023490) #19	PPHLN1 (ENSOCUG00000015680) #20	ENSOCUG00000013664 ##21	YAF2 (ENSOCUG00000007321) #22	GXYLT1 (ENSOCUG00000027426) #23	PDZRN4 (ENSOCUG00000005658) #26	CNTN1 (ENSOCUG00000009395) #27	ENSOCUG00000034185	ENSOCUG00000032666	LRRK2 (ENSOCUG00000007857) #29	SLC2A13 (ENSOCUG00000032613) #30	ENSOCUG00000004661 #31	ABCD2 (ENSOCUG00000016168) #32	KIF21A (ENSOCUG00000016630) #33	ENSOCUG00000034840	CPNE8 (ENSOCUG00000017747) #34	ENSOCUG00000015824 #35	SYT10 (ENSOCUG00000004624) #36	PKP2 (ENSOCUG00000000023) #37