Sarcopterygii ANCESTRAL SPECIES 6 ENSGT01030000234648.a.a.d ENSGT00940000157717 ENSGT00940000154861 ENSGT00940000158384 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT01050000244882.b.c.a ENSGT00390000009678 #11 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Tetrapoda ANCESTRAL SPECIES 14 ENSGT00640000091554 ENSGT00940000157794 ENSGT00940000159659 ENSGT00390000018852 ENSGT00990000203541.a.b ENSGT00940000157446 ENSGT00940000165995 ENSGT00940000166769 ENSGT00940000174128.A ENSGT01020000230394.e.a.a.b.a.a.a ENSGT00940000166426 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Amniota ANCESTRAL SPECIES 22 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Mammalia ANCESTRAL SPECIES 18 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Theria ANCESTRAL SPECIES 28 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Eutheria ANCESTRAL SPECIES 14 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Boreoeutheria ANCESTRAL SPECIES 2 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Euarchontoglires ANCESTRAL SPECIES 2 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Glires ANCESTRAL SPECIES 2 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Rodentia_A ANCESTRAL SPECIES 27 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Hystricomorpha ANCESTRAL SPECIES 34 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.i #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Hystricomorpha_a ANCESTRAL SPECIES 45 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.i #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Guinea pig MODERN SPECIES 16 SUMF1 (ENSCPOG00000014854) #7 ENSCPOG00000019854 #8 LRRN1 (ENSCPOG00000006583) #9 CRBN (ENSCPOG00000007851) #10 TRNT1 (ENSCPOG00000007849) #11 Il5ra (ENSCPOG00000007845) #12 CNTN4 (ENSCPOG00000026863) #13 CNTN6 (ENSCPOG00000001124) #14 CHL1 (ENSCPOG00000014986) #15 CNTN3 (ENSCPOG00000003218) #16 PDZRN3 (ENSCPOG00000030488) #17 PPP4R2 (ENSCPOG00000036245) #18 ENSCPOG00000030150 #19 GXYLT2 (ENSCPOG00000000442) #20 SHQ1 (ENSCPOG00000011443) #21 RYBP (ENSCPOG00000032177) #22 PROK2 (ENSCPOG00000033908) #23 EIF4E3 (ENSCPOG00000000391) #24 FOXP1 (ENSCPOG00000003726) #25 MDFIC2 (ENSCPOG00000036240) #26 MITF (ENSCPOG00000014963) #27 FRMD4B (ENSCPOG00000037444) #28 LMOD3 (ENSCPOG00000013314) #29 ARL6IP5 (ENSCPOG00000033968) #30 UBA3 (ENSCPOG00000030763) #31 TMF1 (ENSCPOG00000013302) #32 EOGT (ENSCPOG00000013299) #33 TAFA4 (ENSCPOG00000013292) #34 TAFA1 (ENSCPOG00000014183) #35 SUCLG2 (ENSCPOG00000013421) #36 KBTBD8 (ENSCPOG00000012739) #37 Hystricomorpha_b ANCESTRAL SPECIES 42 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.i #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Long-tailed chinchilla MODERN SPECIES 128 ITPR1 (ENSCLAG00000009445) SUMF1 (ENSCLAG00000004509) #7 ENSCLAG00000005640 #8 LRRN1 (ENSCLAG00000004896) #9 CRBN (ENSCLAG00000004930) #10 TRNT1 (ENSCLAG00000005186) #11 IL5RA (ENSCLAG00000005656) #12 CNTN4 (ENSCLAG00000006463) #13 CNTN6 (ENSCLAG00000008602) #14 CHL1 (ENSCLAG00000006459) #15 CNTN3 (ENSCLAG00000009614) #16 PDZRN3 (ENSCLAG00000010964) #17 PPP4R2 (ENSCLAG00000003231) #18 GXYLT2 (ENSCLAG00000003908) #20 SHQ1 (ENSCLAG00000004206) #21 RYBP (ENSCLAG00000006008) #22 PROK2 (ENSCLAG00000003618) #23 EIF4E3 (ENSCLAG00000003818) #24 FOXP1 (ENSCLAG00000004963) #25 MDFIC2 (ENSCLAG00000003152) #26 MITF (ENSCLAG00000003365) #27 ENSCLAG00000004383 FRMD4B (ENSCLAG00000003792) #28 LMOD3 (ENSCLAG00000006151) #29 ARL6IP5 (ENSCLAG00000003471) #30 UBA3 (ENSCLAG00000003651) #31 TMF1 (ENSCLAG00000004298) #32 EOGT (ENSCLAG00000004823) #33 TAFA4 (ENSCLAG00000011274) #34 TAFA1 (ENSCLAG00000011025) #35 SUCLG2 (ENSCLAG00000011578) #36 Degu MODERN SPECIES 71 CNTN4 (ENSODEG00000007155) #13 CNTN6 (ENSODEG00000006499) #14 ENSODEG00000007284 ENSODEG00000019383 CHL1 (ENSODEG00000010169) #15 ENSODEG00000019392 CNTN3 (ENSODEG00000006512) #16 PDZRN3 (ENSODEG00000008618) #17 ENSODEG00000006984 ENSODEG00000006618 ENSODEG00000007939 ENSODEG00000007497 ENSODEG00000019359 GXYLT2 (ENSODEG00000008178) #20 SHQ1 (ENSODEG00000009192) #21 RYBP (ENSODEG00000008699) #22 PROK2 (ENSODEG00000007144) #23 GPR27 (ENSODEG00000006497) EIF4E3 (ENSODEG00000006191) #24 FOXP1 (ENSODEG00000007047) #25 MDFIC2 (ENSODEG00000006638) #26 MITF (ENSODEG00000009287) #27 ENSODEG00000006902 FRMD4B (ENSODEG00000005588) #28 LMOD3 (ENSODEG00000005409) #29 ENSODEG00000007217 ARL6IP5 (ENSODEG00000006820) #30 ENSODEG00000007097 #31 TMF1 (ENSODEG00000007699) #32 EOGT (ENSODEG00000006871) #33 TAFA4 (ENSODEG00000005744) #34 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 28 CNTN4 (ENSHGLG00000006279) #13 ENSHGLG00000038160 CNTN6 (ENSHGLG00000003847) #14 ENSHGLG00000003621 #15 ENSHGLG00000042664 ENSHGLG00000002080 #16 ENSHGLG00000032578 ENSHGLG00000003660 ENSHGLG00000038372 ENSHGLG00000041034 ENSHGLG00000041798 PDZRN3 (ENSHGLG00000003072) #17 PPP4R2 (ENSHGLG00000002829) #18 GXYLT2 (ENSHGLG00000002778) #20 SHQ1 (ENSHGLG00000003637) #21 RYBP (ENSHGLG00000040203) #22 PROK2 (ENSHGLG00000046701) #23 GPR27 (ENSHGLG00000002574) EIF4E3 (ENSHGLG00000019560) #24 ENSHGLG00000040329 FOXP1 (ENSHGLG00000002984) #25 MDFIC2 (ENSHGLG00000043866) #26 MITF (ENSHGLG00000002575) #27 FRMD4B (ENSHGLG00000003001) #28 LMOD3 (ENSHGLG00000019110) #29 ARL6IP5 (ENSHGLG00000039284) #30 UBA3 (ENSHGLG00000019309) #31 TMF1 (ENSHGLG00000013960) #32 EOGT (ENSHGLG00000014748) #33 TAFA4 (ENSHGLG00000047561) #34 ENSHGLG00000009657 Naked mole-rat female MODERN SPECIES 5 IGF2BP3 (ENSHGLG00000013075) ENSHGLG00000021352 ENSHGLG00000021349 MALSU1 (ENSHGLG00000014820) GPNMB (ENSHGLG00000014974) ENSHGLG00000039502 ENSHGLG00000014502 ENSHGLG00000033596 ENSHGLG00000016251 ENSHGLG00000016313 ENSHGLG00000016355 ENSHGLG00000045090 TOMM7 (ENSHGLG00000006840) ENSHGLG00000007816 ENSHGLG00000020842 ENSHGLG00000020692 #22 RAPGEF5 (ENSHGLG00000013551) CDCA7L (ENSHGLG00000005237) ENSHGLG00000043520 DNAH11 (ENSHGLG00000014062) SP4 (ENSHGLG00000014842) SP8 (ENSHGLG00000041939) ENSHGLG00000007430 ITGB8 (ENSHGLG00000009109) MACC1 (ENSHGLG00000005625) ENSHGLG00000040956 TMEM196 (ENSHGLG00000035074) POLR1F (ENSHGLG00000010976) FERD3L (ENSHGLG00000036051) ENSHGLG00000033404 HDAC9 (ENSHGLG00000019023) Sciuridae ANCESTRAL SPECIES 41 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000156493 #33 ENSGT00390000010697 #32 ENSGT00550000074831 #31 ENSGT00390000008631.a #30 ENSGT00940000159731 #29 ENSGT01020000230354.A.a #28 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Eurasian red squirrel MODERN SPECIES 10 ENSSVLG00005025798 #8 LRRN1 (ENSSVLG00005025801) #9 ENSSVLG00005025803 CRBN (ENSSVLG00005025805) #10 TRNT1 (ENSSVLG00005025808) #11 IL5RA (ENSSVLG00005025823) #12 CNTN4 (ENSSVLG00005025842) #13 CNTN6 (ENSSVLG00005025861) #14 CHL1 (ENSSVLG00005025877) #15 CNTN3 (ENSSVLG00005025887) #16 ENSSVLG00005010270 PDZRN3 (ENSSVLG00005010337) #17 ENSSVLG00005010375 #18 GXYLT2 (ENSSVLG00005010448) #20 SHQ1 (ENSSVLG00005010502) #21 RYBP (ENSSVLG00005010589) #22 PROK2 (ENSSVLG00005010626) #23 GPR27 (ENSSVLG00005010691) EIF4E3 (ENSSVLG00005010716) #24 FOXP1 (ENSSVLG00005010914) #25 MDFIC2 (ENSSVLG00005011514) #26 MITF (ENSSVLG00005011612) #27 EOGT (ENSSVLG00005012215) #33 TMF1 (ENSSVLG00005012312) #32 UBA3 (ENSSVLG00005012414) #31 ARL6IP5 (ENSSVLG00005012505) #30 LMOD3 (ENSSVLG00005012544) #29 FRMD4B (ENSSVLG00005012609) #28 TAFA1 (ENSSVLG00005013002) #35 ENSSVLG00005013072 SUCLG2 (ENSSVLG00005013123) #36 Marmotini ANCESTRAL SPECIES 49 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000156493 #33 ENSGT00390000010697 #32 ENSGT00550000074831 #31 ENSGT00390000008631.a #30 ENSGT00940000159731 #29 ENSGT01020000230354.A.a #28 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Alpin marmot MODERN SPECIES 40 ITPR1 (ENSMMMG00000007640) SUMF1 (ENSMMMG00000007589) #7 ENSMMMG00000007561 #8 LRRN1 (ENSMMMG00000007534) #9 CRBN (ENSMMMG00000007485) #10 TRNT1 (ENSMMMG00000007463) #11 IL5RA (ENSMMMG00000007442) #12 CNTN4 (ENSMMMG00000007297) #13 CNTN6 (ENSMMMG00000007205) #14 CHL1 (ENSMMMG00000007097) #15 CNTN3 (ENSMMMG00000007027) #16 PDZRN3 (ENSMMMG00000006989) #17 ENSMMMG00000006977 GXYLT2 (ENSMMMG00000006933) #20 SHQ1 (ENSMMMG00000006887) #21 RYBP (ENSMMMG00000006873) #22 PROK2 (ENSMMMG00000006869) #23 ENSMMMG00000006861 #24 FOXP1 (ENSMMMG00000006149) #25 MDFIC2 (ENSMMMG00000006133) #26 MITF (ENSMMMG00000006045) #27 EOGT (ENSMMMG00000006008) #33 TMF1 (ENSMMMG00000005057) #32 UBA3 (ENSMMMG00000004980) #31 ARL6IP5 (ENSMMMG00000004969) #30 LMOD3 (ENSMMMG00000004950) #29 FRMD4B (ENSMMMG00000004812) #28 ENSMMMG00000004803 #34 TAFA1 (ENSMMMG00000004799) #35 SUCLG2 (ENSMMMG00000004779) #36 KBTBD8 (ENSMMMG00000004770) #37 Marmotini_b ANCESTRAL SPECIES 188 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000156493 #33 ENSGT00390000010697 #32 ENSGT00550000074831 #31 ENSGT00390000008631.a #30 ENSGT00940000159731 #29 ENSGT01020000230354.A.a #28 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 ENSGT00940000158653 #37 Arctic ground squirrel MODERN SPECIES 106 CNTN3 (ENSUPAG00010021535) #16 PDZRN3 (ENSUPAG00010021559) #17 PPP4R2 (ENSUPAG00010021567) #18 GXYLT2 (ENSUPAG00010021574) #20 SHQ1 (ENSUPAG00010021581) #21 RYBP (ENSUPAG00010021587) #22 PROK2 (ENSUPAG00010021589) #23 GPR27 (ENSUPAG00010021592) EIF4E3 (ENSUPAG00010021594) #24 FOXP1 (ENSUPAG00010021603) #25 MDFIC2 (ENSUPAG00010021824) #26 MITF (ENSUPAG00010021833) #27 EOGT (ENSUPAG00010021904) #33 TMF1 (ENSUPAG00010021909) #32 UBA3 (ENSUPAG00010021916) #31 ARL6IP5 (ENSUPAG00010021927) #30 LMOD3 (ENSUPAG00010021929) #29 FRMD4B (ENSUPAG00010021932) #28 TAFA1 (ENSUPAG00010021952) #35 SUCLG2 (ENSUPAG00010021955) #36 Squirrel MODERN SPECIES 203 CNTN3 (ENSSTOG00000010775) #16 PDZRN3 (ENSSTOG00000020243) #17 PPP4R2 (ENSSTOG00000024451) #18 GXYLT2 (ENSSTOG00000010059) #20 SHQ1 (ENSSTOG00000010043) #21 RYBP (ENSSTOG00000000185) #22 PROK2 (ENSSTOG00000000976) #23 EIF4E3 (ENSSTOG00000020469) #24 FOXP1 (ENSSTOG00000025624) #25 MDFIC2 (ENSSTOG00000021337) #26 MITF (ENSSTOG00000005880) #27 EOGT (ENSSTOG00000003163) #33 TMF1 (ENSSTOG00000028312) #32 UBA3 (ENSSTOG00000003215) #31 ARL6IP5 (ENSSTOG00000025065) #30 LMOD3 (ENSSTOG00000026793) #29 FRMD4B (ENSSTOG00000028861) #28 TAFA1 (ENSSTOG00000014757) #35 SUCLG2 (ENSSTOG00000020195) #36 KBTBD8 (ENSSTOG00000020443) #37 Rodentia_B ANCESTRAL SPECIES 26 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Kangaroo rat MODERN SPECIES 331 Itpr1 (ENSDORG00000005966) Sumf1 (ENSDORG00000006695) #7 Setmar (ENSDORG00000026212) #8 Lrrn1 (ENSDORG00000023814) #9 Crbn (ENSDORG00000014038) #10 Trnt1 (ENSDORG00000014035) #11 Il5ra (ENSDORG00000014033) #12 Cntn4 (ENSDORG00000014028) #13 Cntn6 (ENSDORG00000005702) #14 Chl1 (ENSDORG00000010546) #15 Cntn3 (ENSDORG00000000121) #16 Pdzrn3 (ENSDORG00000002686) #17 ENSDORG00000023761 Gxylt2 (ENSDORG00000010918) #20 ENSDORG00000029850 #21 Rybp (ENSDORG00000015021) #22 Prok2 (ENSDORG00000006150) #23 Eif4e3 (ENSDORG00000006531) #24 Foxp1 (ENSDORG00000009604) #25 Mdfic2 (ENSDORG00000029192) #26 Mitf (ENSDORG00000003336) #27 Frmd4b (ENSDORG00000002184) #28 Lmod3 (ENSDORG00000000518) #29 Arl6ip5 (ENSDORG00000029346) #30 Uba3 (ENSDORG00000000516) #31 Tmf1 (ENSDORG00000000515) #32 Eogt (ENSDORG00000000514) #33 Tafa4 (ENSDORG00000028398) #34 Tafa1 (ENSDORG00000008222) #35 Suclg2 (ENSDORG00000016563) #36 Kbtbd8 (ENSDORG00000000438) #37 Myomorpha ANCESTRAL SPECIES 36 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Muroidea ANCESTRAL SPECIES 37 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Cricetidae ANCESTRAL SPECIES 3 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Cricetidae_B ANCESTRAL SPECIES 14 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 130 ENSMOCG00000010977 Ncr1 (ENSMOCG00000015667) Gp6 (ENSMOCG00000005915) ENSMOCG00000006750 #22 Rdh13 (ENSMOCG00000001774) ENSMOCG00000019191 Ppp1r12c (ENSMOCG00000021994) Tnnt1 (ENSMOCG00000016771) Tnni3 (ENSMOCG00000003904) Dnaaf3 (ENSMOCG00000018937) Syt5 (ENSMOCG00000015939) Tmem86b (ENSMOCG00000007183) Ppp6r1 (ENSMOCG00000021392) Hspbp1 (ENSMOCG00000016855) Brsk1 (ENSMOCG00000012734) Tmem150b (ENSMOCG00000006716) Kmt5c (ENSMOCG00000013978) Cox6b2 (ENSMOCG00000007830) ENSMOCG00000019215 Prairie vole MODERN SPECIES 84 Trnt1 (ENSMOCG00000004539) #11 Il5ra (ENSMOCG00000015311) #12 Cntn4 (ENSMOCG00000013257) #13 Cntn6 (ENSMOCG00000005399) #14 ENSMOCG00000009333 ENSMOCG00000016932 ENSMOCG00000020899 #15 ENSMOCG00000002512 #15 ENSMOCG00000021562 Cntn3 (ENSMOCG00000007453) #16 ENSMOCG00000009808 Pdzrn3 (ENSMOCG00000015544) #17 ENSMOCG00000000955 #18 Gxylt2 (ENSMOCG00000001994) #20 Shq1 (ENSMOCG00000017836) #21 ENSMOCG00000006102 #22 Prok2 (ENSMOCG00000016202) #23 Gpr27 (ENSMOCG00000010723) Eif4e3 (ENSMOCG00000020297) #24 Foxp1 (ENSMOCG00000013376) #25 Mdfic2 (ENSMOCG00000007282) #26 Mitf (ENSMOCG00000021092) #27 Frmd4b (ENSMOCG00000016753) #28 Lmod3 (ENSMOCG00000013878) #29 Arl6ip5 (ENSMOCG00000012711) #30 Uba3 (ENSMOCG00000022540) #31 Tmf1 (ENSMOCG00000021252) #32 Eogt (ENSMOCG00000010159) #33 Tafa4 (ENSMOCG00000019487) #34 Tafa1 (ENSMOCG00000005890) #35 Suclg2 (ENSMOCG00000019822) #36 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 16 ENSPEMG00000025770 Itpr1 (ENSPEMG00000018533) Sumf1 (ENSPEMG00000012549) #7 Setmar (ENSPEMG00000023423) #8 Lrrn1 (ENSPEMG00000019903) #9 Crbn (ENSPEMG00000020177) #10 Trnt1 (ENSPEMG00000019845) #11 Il5ra (ENSPEMG00000000193) #12 Cntn4 (ENSPEMG00000020085) #13 Cntn6 (ENSPEMG00000019384) #14 Chl1 (ENSPEMG00000023675) #15 Cntn3 (ENSPEMG00000014200) #16 Pdzrn3 (ENSPEMG00000019769) #17 Gxylt2 (ENSPEMG00000005596) #20 Shq1 (ENSPEMG00000000251) #21 ENSPEMG00000017621 #22 ENSPEMG00000028366 Prok2 (ENSPEMG00000030947) #23 ENSPEMG00000026210 Gpr27 (ENSPEMG00000030430) Eif4e3 (ENSPEMG00000015380) #24 Foxp1 (ENSPEMG00000010742) #25 ENSPEMG00000026818 Mdfic2 (ENSPEMG00000002945) #26 Mitf (ENSPEMG00000002848) #27 Frmd4b (ENSPEMG00000018860) #28 Lmod3 (ENSPEMG00000016784) #29 Arl6ip5 (ENSPEMG00000016527) #30 Uba3 (ENSPEMG00000014697) #31 Tmf1 (ENSPEMG00000012807) #32 Eogt (ENSPEMG00000010950) #33 Northern American deer mouse MODERN SPECIES ENSPEMG00000008070 #18 ENSPEMG00000030555 ENSPEMG00000027791 ENSPEMG00000028567 ENSPEMG00000025043 ENSPEMG00000024355 ENSPEMG00000025523 ENSPEMG00000028275 ENSPEMG00000025273 ENSPEMG00000029967 ENSPEMG00000028740 ENSPEMG00000018342 ENSPEMG00000024919 ENSPEMG00000000548 ENSPEMG00000021688 ENSPEMG00000019540 #22 ENSPEMG00000028735 ENSPEMG00000021886 ENSPEMG00000024193 ENSPEMG00000026564 ENSPEMG00000025606 ENSPEMG00000029556 ENSPEMG00000023355 ENSPEMG00000022128 Ppp2r1a (ENSPEMG00000022177) ENSPEMG00000021758 ENSPEMG00000028027 ENSPEMG00000024558 ENSPEMG00000029389 Vmn1r237 (ENSPEMG00000024592) ENSPEMG00000030204 Cricetinae ANCESTRAL SPECIES 8 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Chinese hamster chok1gshd MODERN SPECIES 144 Lrrn1 (ENSCGRG00001000760) #9 Crbn (ENSCGRG00001014850) #10 Trnt1 (ENSCGRG00001009998) #11 Il5ra (ENSCGRG00001023890) #12 Cntn4 (ENSCGRG00001005552) #13 Cntn6 (ENSCGRG00001012547) #14 Chl1 (ENSCGRG00001021609) #15 ENSCGRG00001015306 ENSCGRG00001015607 Cntn3 (ENSCGRG00001013551) #16 ENSCGRG00001003940 Pdzrn3 (ENSCGRG00001017365) #17 Ppp4r2 (ENSCGRG00001010724) Gxylt2 (ENSCGRG00001012822) #20 Shq1 (ENSCGRG00001012583) #21 Rybp (ENSCGRG00001020152) #22 ENSCGRG00001005960 Prok2 (ENSCGRG00001020805) #23 Gpr27 (ENSCGRG00001001036) Eif4e3 (ENSCGRG00001016500) #24 Foxp1 (ENSCGRG00001015802) #25 Mdfic2 (ENSCGRG00001018361) #26 Mitf (ENSCGRG00001011883) #27 Frmd4b (ENSCGRG00001020840) #28 Lmod3 (ENSCGRG00001010389) #29 Arl6ip5 (ENSCGRG00001018813) #30 Uba3 (ENSCGRG00001022490) #31 Tmf1 (ENSCGRG00001018858) #32 Eogt (ENSCGRG00001015087) #33 Tafa4 (ENSCGRG00001013503) #34 ENSCGRG00001008617 Golden Hamster MODERN SPECIES 643 Cntn3 (ENSMAUG00000010639) #16 Pdzrn3 (ENSMAUG00000007003) #17 Ppp4r2 (ENSMAUG00000010766) Gxylt2 (ENSMAUG00000021811) #20 Shq1 (ENSMAUG00000022030) #21 ENSMAUG00000010991 Rybp (ENSMAUG00000010834) #22 Prok2 (ENSMAUG00000007849) #23 Gpr27 (ENSMAUG00000010831) Eif4e3 (ENSMAUG00000019824) #24 Foxp1 (ENSMAUG00000022171) #25 Mdfic2 (ENSMAUG00000012915) #26 Mitf (ENSMAUG00000004545) #27 Frmd4b (ENSMAUG00000007225) #28 Lmod3 (ENSMAUG00000010204) #29 Arl6ip5 (ENSMAUG00000009657) #30 Uba3 (ENSMAUG00000017525) #31 Tmf1 (ENSMAUG00000021427) #32 Eogt (ENSMAUG00000017534) #33 ENSMAUG00000020979 Tafa4 (ENSMAUG00000019968) #34 Tafa1 (ENSMAUG00000019067) #35 Murinae ANCESTRAL SPECIES 4 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Rat MODERN SPECIES 14 Lrrn1 (ENSRNOG00000006802) #9 Crbn (ENSRNOG00000006534) #10 Trnt1 (ENSRNOG00000006432) #11 Il5ra (ENSRNOG00000005954) #12 Cntn4 (ENSRNOG00000005652) #13 Cntn6 (ENSRNOG00000032517) #14 AABR07061614.1 (ENSRNOG00000032820) ENSRNOG00000065903 Chl1 (ENSRNOG00000045771) #15 Cntn3 (ENSRNOG00000006144) #16 Pdzrn3 (ENSRNOG00000057556) #17 Ppp4r2 (ENSRNOG00000024647) Gxylt2 (ENSRNOG00000005621) #20 Actg1-ps9 (ENSRNOG00000062691) Shq1 (ENSRNOG00000005433) #21 LOC120102351 (ENSRNOG00000005353) #22 LOC120102174 (ENSRNOG00000033673) Prok2 (ENSRNOG00000010898) #23 Ier3ip1-ps1 (ENSRNOG00000030004) Gpr27 (ENSRNOG00000010880) Eif4e3 (ENSRNOG00000010301) #24 Foxp1 (ENSRNOG00000009184) #25 Mdfic2 (ENSRNOG00000064294) #26 Mitf (ENSRNOG00000008658) #27 Frmd4b (ENSRNOG00000007764) #28 Lmod3 (ENSRNOG00000032443) #29 Arl6ip5 (ENSRNOG00000006818) #30 Uba3 (ENSRNOG00000006221) #31 Tmf1 (ENSRNOG00000056462) #32 Eogt (ENSRNOG00000024533) #33 Tafa4 (ENSRNOG00000005830) #34 Mus ANCESTRAL SPECIES 12 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Shrew mouse MODERN SPECIES 11 Itpr1 (MGP_PahariEiJ_G0022454) Sumf1 (MGP_PahariEiJ_G0022453) #7 Setmar (MGP_PahariEiJ_G0022452) #8 Lrrn1 (MGP_PahariEiJ_G0022451) #9 Crbn (MGP_PahariEiJ_G0022450) #10 Trnt1 (MGP_PahariEiJ_G0022449) #11 Il5ra (MGP_PahariEiJ_G0022448) #12 MGP_PahariEiJ_G0022447 #13 Cntn6 (MGP_PahariEiJ_G0022446) #14 Chl1 (MGP_PahariEiJ_G0022445) #15 Cntn3 (MGP_PahariEiJ_G0022444) #16 Pdzrn3 (MGP_PahariEiJ_G0022443) #17 Ppp4r2 (MGP_PahariEiJ_G0022442) Gxylt2 (MGP_PahariEiJ_G0022441) #20 Shq1 (MGP_PahariEiJ_G0022440) #21 Rybp (MGP_PahariEiJ_G0022439) #22 Prok2 (MGP_PahariEiJ_G0022438) #23 Gpr27 (MGP_PahariEiJ_G0022437) Eif4e3 (MGP_PahariEiJ_G0022436) #24 MGP_PahariEiJ_G0022435 Foxp1 (MGP_PahariEiJ_G0022434) #25 Mdfic2 (MGP_PahariEiJ_G0022433) #26 Mitf (MGP_PahariEiJ_G0022432) #27 Frmd4b (MGP_PahariEiJ_G0022431) #28 Lmod3 (MGP_PahariEiJ_G0022430) #29 Arl6ip5 (MGP_PahariEiJ_G0022429) #30 Uba3 (MGP_PahariEiJ_G0022428) #31 Tmf1 (MGP_PahariEiJ_G0022427) #32 Eogt (MGP_PahariEiJ_G0022426) #33 Tafa4 (MGP_PahariEiJ_G0022425) #34 Nup50l (MGP_PahariEiJ_G0022424) Mus_A ANCESTRAL SPECIES 7 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.e #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Ryukyu mouse MODERN SPECIES 15 Itpr1 (MGP_CAROLIEiJ_G0028703) Sumf1 (MGP_CAROLIEiJ_G0028702) #7 Setmar (MGP_CAROLIEiJ_G0028701) #8 Lrrn1 (MGP_CAROLIEiJ_G0028700) #9 Crbn (MGP_CAROLIEiJ_G0028699) #10 Trnt1 (MGP_CAROLIEiJ_G0028698) #11 Il5ra (MGP_CAROLIEiJ_G0028697) #12 Cntn4 (MGP_CAROLIEiJ_G0028696) #13 Cntn6 (MGP_CAROLIEiJ_G0028695) #14 Chl1 (MGP_CAROLIEiJ_G0028694) #15 Cntn3 (MGP_CAROLIEiJ_G0028693) #16 Pdzrn3 (MGP_CAROLIEiJ_G0028692) #17 Ppp4r2 (MGP_CAROLIEiJ_G0028691) Gxylt2 (MGP_CAROLIEiJ_G0028690) #20 Shq1 (MGP_CAROLIEiJ_G0028689) #21 Rybp (MGP_CAROLIEiJ_G0028688) #22 Prok2 (MGP_CAROLIEiJ_G0028687) #23 Gpr27 (MGP_CAROLIEiJ_G0028686) Eif4e3 (MGP_CAROLIEiJ_G0028685) #24 MGP_CAROLIEiJ_G0028684 Foxp1 (MGP_CAROLIEiJ_G0028683) #25 Mdfic2 (MGP_CAROLIEiJ_G0028682) #26 Mitf (MGP_CAROLIEiJ_G0028681) #27 MGP_CAROLIEiJ_G0028680 Arl6ip5 (MGP_CAROLIEiJ_G0028679) #30 MGP_CAROLIEiJ_G0028678 MGP_CAROLIEiJ_G0028677 #32 MGP_CAROLIEiJ_G0028676 #33 MGP_CAROLIEiJ_G0028675 #34 Nup50l (MGP_CAROLIEiJ_G0028674) MGP_CAROLIEiJ_G0028673 #35 Mus_B ANCESTRAL SPECIES 15 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.e #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 Mouse MODERN SPECIES 15 Itpr1 (ENSMUSG00000030102) Sumf1 (ENSMUSG00000030101) #7 Setmar (ENSMUSG00000034639) #8 Lrrn1 (ENSMUSG00000034648) #9 Crbn (ENSMUSG00000005362) #10 Trnt1 (ENSMUSG00000013736) #11 Il5ra (ENSMUSG00000005364) #12 Cntn4 (ENSMUSG00000064293) #13 Cntn6 (ENSMUSG00000030092) #14 Chl1 (ENSMUSG00000030077) #15 Cntn3 (ENSMUSG00000030075) #16 Pdzrn3 (ENSMUSG00000035357) #17 Ppp4r2 (ENSMUSG00000052144) Gxylt2 (ENSMUSG00000030074) #20 Shq1 (ENSMUSG00000035378) #21 Rybp (ENSMUSG00000072872) #22 Prok2 (ENSMUSG00000030069) #23 Gpr27 (ENSMUSG00000072875) Eif4e3 (ENSMUSG00000093661) #24 Foxp1 (ENSMUSG00000030067) #25 Mdfic2 (ENSMUSG00000090667) #26 Mitf (ENSMUSG00000035158) #27 Frmd4b (ENSMUSG00000030064) #28 Lmod3 (ENSMUSG00000044086) #29 Arl6ip5 (ENSMUSG00000035199) #30 Uba3 (ENSMUSG00000030061) #31 Tmf1 (ENSMUSG00000030059) #32 Eogt (ENSMUSG00000035245) #33 Tafa4 (ENSMUSG00000046500) #34 Nup50l (ENSMUSG00000072878) Tafa1 (ENSMUSG00000059187) #35 Mus_C ANCESTRAL SPECIES 18 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.e #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00440000035348.l ENSGT00940000162607 #35 spretus MODERN SPECIES 15 Itpr1 (MGP_SPRETEiJ_G0029731) Sumf1 (MGP_SPRETEiJ_G0029730) #7 Setmar (MGP_SPRETEiJ_G0029729) #8 Lrrn1 (MGP_SPRETEiJ_G0029728) #9 Crbn (MGP_SPRETEiJ_G0029727) #10 Trnt1 (MGP_SPRETEiJ_G0029726) #11 Il5ra (MGP_SPRETEiJ_G0029725) #12 Cntn4 (MGP_SPRETEiJ_G0029724) #13 Cntn6 (MGP_SPRETEiJ_G0029723) #14 Chl1 (MGP_SPRETEiJ_G0029722) #15 Cntn3 (MGP_SPRETEiJ_G0029721) #16 Pdzrn3 (MGP_SPRETEiJ_G0029720) #17 Ppp4r2 (MGP_SPRETEiJ_G0029719) Gxylt2 (MGP_SPRETEiJ_G0029718) #20 Shq1 (MGP_SPRETEiJ_G0029717) #21 Rybp (MGP_SPRETEiJ_G0029716) #22 Prok2 (MGP_SPRETEiJ_G0029715) #23 Gpr27 (MGP_SPRETEiJ_G0029714) Eif4e3 (MGP_SPRETEiJ_G0029713) #24 MGP_SPRETEiJ_G0029712 Foxp1 (MGP_SPRETEiJ_G0029711) #25 Mdfic2 (MGP_SPRETEiJ_G0029710) #26 Mitf (MGP_SPRETEiJ_G0029709) #27 Frmd4b (MGP_SPRETEiJ_G0029708) #28 Lmod3 (MGP_SPRETEiJ_G0029707) #29 Arl6ip5 (MGP_SPRETEiJ_G0029706) #30 Uba3 (MGP_SPRETEiJ_G0029705) #31 Tmf1 (MGP_SPRETEiJ_G0029704) #32 Eogt (MGP_SPRETEiJ_G0029703) #33 Tafa4 (MGP_SPRETEiJ_G0029702) #34 Nup50l (MGP_SPRETEiJ_G0029701) Steppe mouse MODERN SPECIES 3356 Cntn3 (ENSMSIG00000030860) #16 Pdzrn3 (ENSMSIG00000030855) #17 Ppp4r2 (ENSMSIG00000030852) Gxylt2 (ENSMSIG00000030850) #20 Shq1 (ENSMSIG00000030841) #21 Rybp (ENSMSIG00000030836) #22 ENSMSIG00000030829 Prok2 (ENSMSIG00000030827) #23 Gpr27 (ENSMSIG00000030826) Eif4e3 (ENSMSIG00000030822) #24 Foxp1 (ENSMSIG00000030580) #25 Mdfic2 (ENSMSIG00000030573) #26 ENSMSIG00000030568 Mitf (ENSMSIG00000030546) #27 ENSMSIG00000030528 Upper Galilee mountains blind mole rat MODERN SPECIES 763 Cntn3 (ENSNGAG00000022686) #16 Pdzrn3 (ENSNGAG00000023079) #17 ENSNGAG00000023250 #18 Gxylt2 (ENSNGAG00000003681) #20 Shq1 (ENSNGAG00000023317) #21 Rybp (ENSNGAG00000006529) #22 Prok2 (ENSNGAG00000020136) #23 Gpr27 (ENSNGAG00000004137) Eif4e3 (ENSNGAG00000000837) #24 Lesser Egyptian jerboa MODERN SPECIES 45 ENSJJAG00000004639 Crbn (ENSJJAG00000011234) #10 Trnt1 (ENSJJAG00000018561) #11 Il5ra (ENSJJAG00000010396) #12 Cntn4 (ENSJJAG00000023102) #13 ENSJJAG00000010075 Cntn6 (ENSJJAG00000013679) #14 ENSJJAG00000017679 Chl1 (ENSJJAG00000020689) #15 ENSJJAG00000000622 #30 Cntn3 (ENSJJAG00000012448) #16 Pdzrn3 (ENSJJAG00000000291) #17 ENSJJAG00000022712 #18 Gxylt2 (ENSJJAG00000013774) #20 Shq1 (ENSJJAG00000017611) #21 Rybp (ENSJJAG00000017045) #22 Prok2 (ENSJJAG00000021320) #23 Gpr27 (ENSJJAG00000011153) Eif4e3 (ENSJJAG00000002638) #24 Foxp1 (ENSJJAG00000022621) #25 Mdfic2 (ENSJJAG00000012963) #26 Mitf (ENSJJAG00000018472) #27 Frmd4b (ENSJJAG00000023390) #28 Minar2 (ENSJJAG00000000279) Adamts19 (ENSJJAG00000021431) Isoc1 (ENSJJAG00000019157) Slc27a6 (ENSJJAG00000020519) ENSJJAG00000017710 Fbn2 (ENSJJAG00000020592) Slc12a2 (ENSJJAG00000019580) ENSJJAG00000017426 Lagomorpha ANCESTRAL SPECIES 11 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 ENSGT00940000158653 #37 Rabbit MODERN SPECIES 20 ENSOCUG00000008926 ENSOCUG00000010081 ENSOCUG00000022648 ZSCAN16 (ENSOCUG00000039537) ZKSCAN8 (ENSOCUG00000006850) ORYCUNV1R1530 (ENSOCUG00000038616) ENSOCUG00000021210 ENSOCUG00000024463 ENSOCUG00000033110 ENSOCUG00000030000 CNTN3 (ENSOCUG00000013181) #16 PDZRN3 (ENSOCUG00000007731) #17 PPP4R2 (ENSOCUG00000006235) #18 GXYLT2 (ENSOCUG00000016704) #20 SHQ1 (ENSOCUG00000016695) #21 RYBP (ENSOCUG00000011730) #22 PROK2 (ENSOCUG00000006542) #23 ENSOCUG00000000259 #24 FOXP1 (ENSOCUG00000007155) #25 ENSOCUG00000035312 ENSOCUG00000036468 MDFIC2 (ENSOCUG00000031604) #26 MITF (ENSOCUG00000002190) #27 ENSOCUG00000026608 FRMD4B (ENSOCUG00000002887) #28 LMOD3 (ENSOCUG00000008188) #29 ARL6IP5 (ENSOCUG00000008184) #30 UBA3 (ENSOCUG00000008169) #31 TMF1 (ENSOCUG00000008154) #32 ENSOCUG00000016492 EOGT (ENSOCUG00000012022) #33 Pika MODERN SPECIES 1210 RYBP (ENSOPRG00000002312) #22 Tree shrew MODERN SPECIES 3117 RYBP (ENSTBEG00000003789) #22 Primates ANCESTRAL SPECIES 1 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Strepsirrhini ANCESTRAL SPECIES 1 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Lemuriformes ANCESTRAL SPECIES 73 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Mouse lemur MODERN SPECIES 25 CNTN6 (ENSMICG00000001000) #14 CHL1 (ENSMICG00000010518) #15 CNTN3 (ENSMICG00000006231) #16 ENSMICG00000038029 PDZRN3 (ENSMICG00000028272) #17 ENSMICG00000042500 #18 GXYLT2 (ENSMICG00000036477) #20 SHQ1 (ENSMICG00000009224) #21 RYBP (ENSMICG00000045355) #22 PROK2 (ENSMICG00000001127) #23 GPR27 (ENSMICG00000032202) EIF4E3 (ENSMICG00000001125) #24 FOXP1 (ENSMICG00000005350) #25 MDFIC2 (ENSMICG00000032034) #26 MITF (ENSMICG00000002894) #27 ZNF354A (ENSMICG00000006390) CLK4 (ENSMICG00000038063) COL23A1 (ENSMICG00000005409) PHYKPL (ENSMICG00000005397) HNRNPAB (ENSMICG00000027030) NHP2 (ENSMICG00000005379) RMND5B (ENSMICG00000005367) N4BP3 (ENSMICG00000033359) B4GALT7 (ENSMICG00000034153) Lemuriformes_a ANCESTRAL SPECIES 211 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Coquerels sifaka MODERN SPECIES 536 ENSPCOG00000027686 RYBP (ENSPCOG00000025214) #22 PROK2 (ENSPCOG00000023753) #23 GPR27 (ENSPCOG00000025824) EIF4E3 (ENSPCOG00000022529) #24 FOXP1 (ENSPCOG00000016995) #25 MDFIC2 (ENSPCOG00000017992) #26 Greater bamboo lemur MODERN SPECIES 657 RYBP (ENSPSMG00000016629) #22 PROK2 (ENSPSMG00000016641) #23 GPR27 (ENSPSMG00000016654) EIF4E3 (ENSPSMG00000016679) #24 FOXP1 (ENSPSMG00000016990) #25 MDFIC2 (ENSPSMG00000017390) #26 MITF (ENSPSMG00000017533) #27 FRMD4B (ENSPSMG00000017680) #28 LMOD3 (ENSPSMG00000017702) #29 ENSPSMG00000017713 #30 UBA3 (ENSPSMG00000017781) #31 TMF1 (ENSPSMG00000017887) #32 EOGT (ENSPSMG00000017952) #33 TAFA4 (ENSPSMG00000017971) #34 Haplorrhini ANCESTRAL SPECIES 5 ENSGT00940000158384 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Tarsier MODERN SPECIES 7169 RYBP (ENSTSYG00000002235) #22 Simiiformes ANCESTRAL SPECIES 1 ENSGT00440000033232.c ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Platyrrhini ANCESTRAL SPECIES 18 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00490000044176 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.c #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Cebidae ANCESTRAL SPECIES 14 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00490000044176 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.c #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Marmoset MODERN SPECIES 6 CNTN6 (ENSCJAG00000015346) #14 ENSCJAG00000084962 CHL1 (ENSCJAG00000015257) #15 ENSCJAG00000082047 ENSCJAG00000077178 CNTN3 (ENSCJAG00000015217) #16 ENSCJAG00000015202 ENSCJAG00000080600 ENSCJAG00000070041 PDZRN3 (ENSCJAG00000015181) #17 ENSCJAG00000079111 PPP4R2 (ENSCJAG00000041360) #18 GXYLT2 (ENSCJAG00000015146) #20 ENSCJAG00000075002 SHQ1 (ENSCJAG00000015131) #21 RYBP (ENSCJAG00000053393) #22 ENSCJAG00000083199 ENSCJAG00000079742 ENSCJAG00000074041 PROK2 (ENSCJAG00000080226) #23 GPR27 (ENSCJAG00000040260) ENSCJAG00000044237 #24 FOXP1 (ENSCJAG00000013138) #25 ENSCJAG00000072251 MDFIC2 (ENSCJAG00000064939) #26 MITF (ENSCJAG00000013260) #27 FRMD4B (ENSCJAG00000013312) #28 LMOD3 (ENSCJAG00000013357) #29 ARL6IP5 (ENSCJAG00000044302) #30 UBA3 (ENSCJAG00000013395) #31 TMF1 (ENSCJAG00000013491) #32 Cebidae_a ANCESTRAL SPECIES 24 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00490000044176 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.c #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Bolivian squirrel monkey MODERN SPECIES 156 CNTN3 (ENSSBOG00000013155) #16 PDZRN3 (ENSSBOG00000029197) #17 PPP4R2 (ENSSBOG00000018839) #18 ENSSBOG00000030623 GXYLT2 (ENSSBOG00000021809) #20 ENSSBOG00000030665 SHQ1 (ENSSBOG00000021038) #21 RYBP (ENSSBOG00000024112) #22 PROK2 (ENSSBOG00000029837) #23 EIF4E3 (ENSSBOG00000020647) #24 FOXP1 (ENSSBOG00000027035) #25 MDFIC2 (ENSSBOG00000022036) #26 MITF (ENSSBOG00000023784) #27 FRMD4B (ENSSBOG00000029694) #28 LMOD3 (ENSSBOG00000031092) #29 ARL6IP5 (ENSSBOG00000033916) #30 ENSSBOG00000028598 #31 TMF1 (ENSSBOG00000024217) #32 ENSSBOG00000036317 EOGT (ENSSBOG00000025714) #33 TAFA4 (ENSSBOG00000027474) #34 ENSSBOG00000027899 Capuchin MODERN SPECIES 152 CHL1 (ENSCCAG00000031503) #15 CNTN3 (ENSCCAG00000032568) #16 ENSCCAG00000028882 PDZRN3 (ENSCCAG00000028868) #17 ENSCCAG00000008412 PPP4R2 (ENSCCAG00000023322) #18 GXYLT2 (ENSCCAG00000023840) #20 ENSCCAG00000035805 ENSCCAG00000027080 #21 RYBP (ENSCCAG00000025583) #22 PROK2 (ENSCCAG00000020540) #23 GPR27 (ENSCCAG00000032437) EIF4E3 (ENSCCAG00000002248) #24 Mas night monkey MODERN SPECIES 1103 PDZRN3 (ENSANAG00000024526) #17 ENSANAG00000024156 GXYLT2 (ENSANAG00000029166) #20 ENSANAG00000033608 ENSANAG00000029241 #21 RYBP (ENSANAG00000027832) #22 PROK2 (ENSANAG00000025790) #23 GPR27 (ENSANAG00000015856) EIF4E3 (ENSANAG00000031727) #24 FOXP1 (ENSANAG00000028269) #25 ENSANAG00000017661 ENSANAG00000020794 MDFIC2 (ENSANAG00000031584) #26 MITF (ENSANAG00000033269) #27 FRMD4B (ENSANAG00000034952) #28 LMOD3 (ENSANAG00000020335) #29 ARL6IP5 (ENSANAG00000021456) #30 ENSANAG00000035877 #31 TMF1 (ENSANAG00000037546) #32 EOGT (ENSANAG00000030876) #33 TAFA4 (ENSANAG00000020763) #34 Catarrhini ANCESTRAL SPECIES 2 ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Cercopithecidae ANCESTRAL SPECIES 1 ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00390000008631.a.c #30 ENSGT00550000074831 #31 Rhinopithecus ANCESTRAL SPECIES 376 ENSGT00940000160282 #16 ENSGT00940000169558 ENSGT00950000183062.a.a.a #17 ENSGT00490000044176.a ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00940000153510.a.f.a ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 Golden snub-nosed monkey MODERN SPECIES 2551 CNTN3 (ENSRROG00000015240) #16 ENSRROG00000043474 PDZRN3 (ENSRROG00000000088) #17 ENSRROG00000014332 ENSRROG00000013459 #18 EBLN2 (ENSRROG00000045407) GXYLT2 (ENSRROG00000032249) #20 ENSRROG00000014028 SHQ1 (ENSRROG00000034126) #21 RYBP (ENSRROG00000043276) #22 ENSRROG00000031494 PROK2 (ENSRROG00000038544) #23 ENSRROG00000028681 ENSRROG00000014883 #24 FOXP1 (ENSRROG00000044844) #25 Black snub-nosed monkey MODERN SPECIES 1077 PPP4R2 (ENSRBIG00000040717) #18 EBLN2 (ENSRBIG00000000043) GXYLT2 (ENSRBIG00000032701) #20 ENSRBIG00000036548 SHQ1 (ENSRBIG00000026280) #21 RYBP (ENSRBIG00000037631) #22 ENSRBIG00000031010 PROK2 (ENSRBIG00000040938) #23 EIF4E3 (ENSRBIG00000028060) #24 FOXP1 (ENSRBIG00000012977) #25 Cercopithecinae ANCESTRAL SPECIES 5 ENSGT00390000008983.a #7 ENSGT00440000033232.c ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 Vervet Monkey MODERN SPECIES 14 ITPR1 (ENSCSAG00000010951) SUMF1 (ENSCSAG00000011018) #7 SETMAR (ENSCSAG00000011036) LRRN1 (ENSCSAG00000018805) #9 CRBN (ENSCSAG00000011049) #10 TRNT1 (ENSCSAG00000011052) #11 IL5RA (ENSCSAG00000011082) #12 CNTN4 (ENSCSAG00000011111) #13 CNTN6 (ENSCSAG00000011221) #14 CHL1 (ENSCSAG00000011267) #15 CNTN3 (ENSCSAG00000011366) #16 PDZRN3 (ENSCSAG00000011455) #17 PPP4R2 (ENSCSAG00000011489) #18 GXYLT2 (ENSCSAG00000011498) #20 SHQ1 (ENSCSAG00000011514) #21 RYBP (ENSCSAG00000011518) #22 GPR27 (ENSCSAG00000018804) ENSCSAG00000011556 #24 FOXP1 (ENSCSAG00000011581) #25 ENSCSAG00000018802 MITF (ENSCSAG00000011595) #27 ENSCSAG00000011601 ENSCSAG00000018800 FRMD4B (ENSCSAG00000011618) #28 LMOD3 (ENSCSAG00000011626) #29 ARL6IP5 (ENSCSAG00000011634) #30 UBA3 (ENSCSAG00000011650) #31 TMF1 (ENSCSAG00000011667) #32 EOGT (ENSCSAG00000011678) #33 TAFA4 (ENSCSAG00000011689) #34 ENSCSAG00000011694 Cercopithecinae_a ANCESTRAL SPECIES 5 ENSGT00390000008983.a #7 ENSGT00440000033232.c ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 Macaca ANCESTRAL SPECIES 5 ENSGT00390000008983.a #7 ENSGT00440000033232.c.f ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Pig-tailed macaque MODERN SPECIES 560 CCSER1 (ENSMNEG00000030774) ENSMNEG00000032609 GRID2 (ENSMNEG00000015816) ATOH1 (ENSMNEG00000006193) SMARCAD1 (ENSMNEG00000038117) HPGDS (ENSMNEG00000033422) PDLIM5 (ENSMNEG00000031120) CNTN6 (ENSMNEG00000018635) #14 CHL1 (ENSMNEG00000028818) #15 CNTN3 (ENSMNEG00000035492) #16 ENSMNEG00000038271 PDZRN3 (ENSMNEG00000034940) #17 ENSMNEG00000014462 #18 GXYLT2 (ENSMNEG00000031743) #20 SHQ1 (ENSMNEG00000032667) #21 RYBP (ENSMNEG00000010262) #22 PROK2 (ENSMNEG00000035459) #23 ENSMNEG00000006444 GPR27 (ENSMNEG00000017685) ENSMNEG00000035212 #24 FOXP1 (ENSMNEG00000028530) #25 MDFIC2 (ENSMNEG00000043959) #26 ENSMNEG00000029209 ENSMNEG00000013127 MITF (ENSMNEG00000036173) #27 Macaca_a ANCESTRAL SPECIES 5 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00440000033232.c.f ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Rhesus MODERN SPECIES 11 TRNT1 (ENSMMUG00000017983) #11 IL5RA (ENSMMUG00000001849) #12 CNTN4 (ENSMMUG00000001847) #13 ENSMMUG00000056158 ENSMMUG00000009425 ENSMMUG00000051943 CNTN6 (ENSMMUG00000008549) #14 CHL1 (ENSMMUG00000001349) #15 CNTN3 (ENSMMUG00000021241) #16 ENSMMUG00000051810 PDZRN3 (ENSMMUG00000012661) #17 ENSMMUG00000064384 PPP4R2 (ENSMMUG00000016959) #18 GXYLT2 (ENSMMUG00000022507) #20 SHQ1 (ENSMMUG00000009571) #21 RYBP (ENSMMUG00000042444) #22 PROK2 (ENSMMUG00000018494) #23 GPR27 (ENSMMUG00000040565) EIF4E3 (ENSMMUG00000007780) #24 FOXP1 (ENSMMUG00000002889) #25 MDFIC2 (ENSMMUG00000057543) #26 MITF (ENSMMUG00000002100) #27 FRMD4B (ENSMMUG00000000387) #28 LMOD3 (ENSMMUG00000008628) #29 ARL6IP5 (ENSMMUG00000058373) #30 UBA3 (ENSMMUG00000008620) #31 TMF1 (ENSMMUG00000008616) #32 EOGT (ENSMMUG00000011090) #33 TAFA4 (ENSMMUG00000050069) #34 TAFA1 (ENSMMUG00000013847) #35 SUCLG2 (ENSMMUG00000009693) #36 Crab-eating macaque MODERN SPECIES 11 SUMF1 (ENSMFAG00000040853) #7 ENSMFAG00000029288 LRRN1 (ENSMFAG00000020302) #9 CRBN (ENSMFAG00000031028) #10 TRNT1 (ENSMFAG00000045113) #11 IL5RA (ENSMFAG00000006030) #12 CNTN4 (ENSMFAG00000031919) #13 CNTN6 (ENSMFAG00000001088) #14 CHL1 (ENSMFAG00000040804) #15 CNTN3 (ENSMFAG00000045446) #16 PDZRN3 (ENSMFAG00000000986) #17 PPP4R2 (ENSMFAG00000042258) #18 GXYLT2 (ENSMFAG00000044294) #20 SHQ1 (ENSMFAG00000039148) #21 ENSMFAG00000048279 RYBP (ENSMFAG00000049247) #22 PROK2 (ENSMFAG00000003820) #23 ENSMFAG00000024958 GPR27 (ENSMFAG00000053255) EIF4E3 (ENSMFAG00000039909) #24 FOXP1 (ENSMFAG00000033964) #25 MDFIC2 (ENSMFAG00000042217) #26 MITF (ENSMFAG00000038478) #27 FRMD4B (ENSMFAG00000040109) #28 LMOD3 (ENSMFAG00000044328) #29 ARL6IP5 (ENSMFAG00000001584) #30 ENSMFAG00000051018 UBA3 (ENSMFAG00000036648) #31 TMF1 (ENSMFAG00000037002) #32 EOGT (ENSMFAG00000041998) #33 TAFA4 (ENSMFAG00000020992) #34 Cercopithecinae_b ANCESTRAL SPECIES ENSGT00390000008983.a #7 ENSGT00440000033232.c ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 Olive baboon MODERN SPECIES 11 TRNT1 (ENSPANG00000025944) #11 IL5RA (ENSPANG00000011489) #12 ENSPANG00000011250 #13 ENSPANG00000041415 #13 CNTN6 (ENSPANG00000010252) #14 ENSPANG00000050596 CHL1 (ENSPANG00000007743) #15 ENSPANG00000049590 CNTN3 (ENSPANG00000011424) #16 PDZRN3 (ENSPANG00000011423) #17 PPP4R2 (ENSPANG00000004247) #18 GXYLT2 (ENSPANG00000023883) #20 ENSPANG00000041507 SHQ1 (ENSPANG00000002881) #21 ENSPANG00000043336 RYBP (ENSPANG00000046879) #22 PROK2 (ENSPANG00000031802) #23 GPR27 (ENSPANG00000037165) ENSPANG00000024441 #24 FOXP1 (ENSPANG00000009084) #25 MDFIC2 (ENSPANG00000040564) #26 MITF (ENSPANG00000011565) #27 ENSPANG00000030680 FRMD4B (ENSPANG00000022151) #28 LMOD3 (ENSPANG00000011422) #29 ARL6IP5 (ENSPANG00000006554) #30 UBA3 (ENSPANG00000021492) #31 ENSPANG00000029557 TMF1 (ENSPANG00000014204) #32 EOGT (ENSPANG00000012769) #33 ENSPANG00000022502 Cercopithecinae_d ANCESTRAL SPECIES 12 ENSGT00390000008983.a #7 ENSGT00440000033232.c ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00390000004169.b ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865.a.a #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.d.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 Drill MODERN SPECIES 264 EEFSEC (ENSMLEG00000041771) ENSMLEG00000044016 RUVBL1 (ENSMLEG00000038540) SEC61A1 (ENSMLEG00000032430) KBTBD12 (ENSMLEG00000032213) MGLL (ENSMLEG00000038697) ABTB1 (ENSMLEG00000043506) PODXL2 (ENSMLEG00000021945) MCM2 (ENSMLEG00000038079) TPRA1 (ENSMLEG00000034167) ENSMLEG00000026183 PRR23E (ENSMLEG00000030492) PPP4R2 (ENSMLEG00000040160) #18 GXYLT2 (ENSMLEG00000000099) #20 SHQ1 (ENSMLEG00000038493) #21 RYBP (ENSMLEG00000038150) #22 ENSMLEG00000037986 PROK2 (ENSMLEG00000030120) #23 ENSMLEG00000010756 ENSMLEG00000038551 #24 FOXP1 (ENSMLEG00000037250) #25 MDFIC2 (ENSMLEG00000007420) #26 ENSMLEG00000034644 MITF (ENSMLEG00000039415) #27 FRMD4B (ENSMLEG00000034545) #28 LMOD3 (ENSMLEG00000008625) #29 ARL6IP5 (ENSMLEG00000032302) #30 ENSMLEG00000035493 UBA3 (ENSMLEG00000043478) #31 TMF1 (ENSMLEG00000035288) #32 EOGT (ENSMLEG00000026880) #33 Sooty mangabey MODERN SPECIES 650 SUMF1 (ENSCATG00000041356) #7 SETMAR (ENSCATG00000030348) ENSCATG00000036442 LRRN1 (ENSCATG00000022421) #9 CRBN (ENSCATG00000031208) #10 TRNT1 (ENSCATG00000031985) #11 IL5RA (ENSCATG00000034457) #12 CNTN4 (ENSCATG00000013943) #13 CNTN6 (ENSCATG00000010690) #14 CHL1 (ENSCATG00000029263) #15 CNTN3 (ENSCATG00000034171) #16 PDZRN3 (ENSCATG00000011356) #17 PPP4R2 (ENSCATG00000043982) #18 GXYLT2 (ENSCATG00000041906) #20 SHQ1 (ENSCATG00000041238) #21 RYBP (ENSCATG00000034872) #22 ENSCATG00000036252 PROK2 (ENSCATG00000034783) #23 ENSCATG00000004327 GPR27 (ENSCATG00000022613) ENSCATG00000042150 #24 FOXP1 (ENSCATG00000044155) #25 MDFIC2 (ENSCATG00000030313) #26 ENSCATG00000035930 MITF (ENSCATG00000036190) #27 FRMD4B (ENSCATG00000041747) #28 LMOD3 (ENSCATG00000014427) #29 ARL6IP5 (ENSCATG00000029543) #30 ENSCATG00000029114 UBA3 (ENSCATG00000043878) #31 TMF1 (ENSCATG00000042507) #32 Hominoidea ANCESTRAL SPECIES 2 ENSGT00440000033232.c ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975.g #18 ENSGT00490000044176.b.b ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Gibbon MODERN SPECIES 13 TRNT1 (ENSNLEG00000003226) #11 IL5RA (ENSNLEG00000003193) #12 CNTN4 (ENSNLEG00000003113) #13 ENSNLEG00000034611 ENSNLEG00000029240 CNTN6 (ENSNLEG00000003079) #14 CHL1 (ENSNLEG00000002952) #15 CNTN3 (ENSNLEG00000002884) #16 ENSNLEG00000036254 PDZRN3 (ENSNLEG00000002833) #17 PPP4R2 (ENSNLEG00000029576) #18 ENSNLEG00000035814 GXYLT2 (ENSNLEG00000002790) #20 ENSNLEG00000029680 SHQ1 (ENSNLEG00000002731) #21 RYBP (ENSNLEG00000031222) #22 PROK2 (ENSNLEG00000002696) #23 ENSNLEG00000002684 #24 FOXP1 (ENSNLEG00000002497) #25 MDFIC2 (ENSNLEG00000030576) #26 ENSNLEG00000002490 ENSNLEG00000029106 MITF (ENSNLEG00000002357) #27 FRMD4B (ENSNLEG00000002248) #28 LMOD3 (ENSNLEG00000002236) #29 ARL6IP5 (ENSNLEG00000029362) #30 UBA3 (ENSNLEG00000002198) #31 ENSNLEG00000031694 TMF1 (ENSNLEG00000002036) #32 EOGT (ENSNLEG00000001976) #33 TAFA4 (ENSNLEG00000001971) #34 Hominidae ANCESTRAL SPECIES 2 ENSGT00390000014001.b ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000153272.a.b.o.b.b ENSGT00950000183062.a.a.a #17 ENSGT00940000160975.g #18 ENSGT00490000044176.b.b ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Orangutan MODERN SPECIES 16 LRRN1 (ENSPPYG00000013700) #9 CRBN (ENSPPYG00000013701) #10 TRNT1 (ENSPPYG00000013702) #11 IL5RA (ENSPPYG00000013703) #12 CNTN4 (ENSPPYG00000013704) #13 ENSPPYG00000033051 CNTN6 (ENSPPYG00000013706) #14 ENSPPYG00000013708 CHL1 (ENSPPYG00000013709) #15 CNTN3 (ENSPPYG00000013710) #16 PDZRN3 (ENSPPYG00000013713) #17 PPP4R2 (ENSPPYG00000013715) #18 GXYLT2 (ENSPPYG00000013716) #20 ENSPPYG00000038319 SHQ1 (ENSPPYG00000013717) #21 RYBP (ENSPPYG00000033076) #22 PROK2 (ENSPPYG00000013719) #23 GPR27 (ENSPPYG00000013720) EIF4E3 (ENSPPYG00000033784) #24 FOXP1 (ENSPPYG00000013722) #25 MDFIC2 (ENSPPYG00000041220) #26 MITF (ENSPPYG00000013725) #27 FRMD4B (ENSPPYG00000013726) #28 LMOD3 (ENSPPYG00000013727) #29 ARL6IP5 (ENSPPYG00000013728) #30 UBA3 (ENSPPYG00000013729) #31 ENSPPYG00000038623 TMF1 (ENSPPYG00000013730) #32 EOGT (ENSPPYG00000013731) #33 ENSPPYG00000035430 #34 TAFA1 (ENSPPYG00000013733) #35 Homo/Pan/Gorilla group ANCESTRAL SPECIES 2 ENSGT00530000063353.a.b.b ENSGT00940000155947 ENSGT00930000151026.e.b ENSGT00390000017040 ENSGT00940000154477.i ENSGT00940000156324 ENSGT00390000017955.c.s.b ENSGT00940000164367 ENSGT00940000160282 #16 ENSGT00940000153272.a.b.o.b.b ENSGT00950000183062.a.a.a #17 ENSGT00940000160975.g #18 ENSGT00490000044176.b.b ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Gorilla MODERN SPECIES 16 ROBO1 (ENSGGOG00000001449) ENSGGOG00000027306 ENSGGOG00000040855 ROBO2 (ENSGGOG00000011779) ENSGGOG00000041697 ENSGGOG00000040706 ENSGGOG00000025270 CNTN3 (ENSGGOG00000002395) #16 ENSGGOG00000024839 PDZRN3 (ENSGGOG00000008313) #17 ENSGGOG00000005021 PPP4R2 (ENSGGOG00000008408) #18 ENSGGOG00000043304 GXYLT2 (ENSGGOG00000005057) #20 SHQ1 (ENSGGOG00000034818) #21 RYBP (ENSGGOG00000040802) #22 PROK2 (ENSGGOG00000024537) #23 ENSGGOG00000039593 GPR27 (ENSGGOG00000010203) ENSGGOG00000042096 #24 FOXP1 (ENSGGOG00000010391) #25 RNF151 (ENSGGOG00000009376) MDFIC2 (ENSGGOG00000043971) #26 ENSGGOG00000026201 MITF (ENSGGOG00000024338) #27 FRMD4B (ENSGGOG00000002181) #28 LMOD3 (ENSGGOG00000015200) #29 ARL6IP5 (ENSGGOG00000000983) #30 ENSGGOG00000036802 UBA3 (ENSGGOG00000003959) #31 TMF1 (ENSGGOG00000006754) #32 Homo/Pan group ANCESTRAL SPECIES 3 ENSGT00940000155947 ENSGT00930000151026.e.b ENSGT00390000017040 ENSGT00940000154477.i ENSGT00940000156324 ENSGT00390000017955.c.s.b ENSGT00940000164367 ENSGT00530000064266.e ENSGT00940000160282 #16 ENSGT00940000153272.a.b.o.b.b ENSGT00950000183062.a.a.a #17 ENSGT00940000160975.g #18 ENSGT00490000044176.b.b ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Pan ANCESTRAL SPECIES 2 ENSGT00940000154477.i ENSGT00940000156324 ENSGT00390000017955.c.s.b ENSGT00940000164367 ENSGT00530000064266.e ENSGT00940000160282 #16 ENSGT00940000153272.a.b.o.b.b ENSGT00950000183062.a.a.a #17 ENSGT00440000039029.g.b ENSGT00490000044176.b.b ENSGT00940000160975.g #18 ENSGT00950000182841.b.a.a.b.a.a.b.b.a.b.c.b.b ENSGT00940000158065 #20 ENSGT00940000153510.a.f ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00530000063786.a.m ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01040000240967 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Chimpanzee MODERN SPECIES 16 ENSPTRG00000046458 ENSPTRG00000045243 ENSPTRG00000045768 ENSPTRG00000042566 ENSPTRG00000049296 CNTN3 (ENSPTRG00000015111) #16 ENSPTRG00000045687 PDZRN3 (ENSPTRG00000015109) #17 ENSPTRG00000043397 ENSPTRG00000040549 ENSPTRG00000049304 PPP4R2 (ENSPTRG00000015108) #20 ENSPTRG00000048729 ENSPTRG00000044295 SHQ1 (ENSPTRG00000015106) #21 RYBP (ENSPTRG00000051886) #22 PROK2 (ENSPTRG00000015104) #23 ENSPTRG00000048214 GPR27 (ENSPTRG00000015103) EIF4E3 (ENSPTRG00000015102) #24 FOXP1 (ENSPTRG00000015101) #25 MDFIC2 (ENSPTRG00000044422) #26 ENSPTRG00000044227 MITF (ENSPTRG00000015100) #27 FRMD4B (ENSPTRG00000015098) #28 LMOD3 (ENSPTRG00000015097) #29 ARL6IP5 (ENSPTRG00000015096) #30 ENSPTRG00000048155 UBA3 (ENSPTRG00000015095) #31 TMF1 (ENSPTRG00000015094) #32 EOGT (ENSPTRG00000015092) #33 Bonobo MODERN SPECIES 16 ENSPPAG00000041147 ENSPPAG00000038879 FRG2C (ENSPPAG00000034046) HIC2 (ENSPPAG00000037732) ENSPPAG00000026052 CNTN3 (ENSPPAG00000028261) #16 ENSPPAG00000020828 PDZRN3 (ENSPPAG00000037945) #17 ENSPPAG00000022036 EBLN2 (ENSPPAG00000043421) PPP4R2 (ENSPPAG00000042397) #18 ENSPPAG00000009897 GXYLT2 (ENSPPAG00000037639) #20 ENSPPAG00000029534 SHQ1 (ENSPPAG00000027714) #21 RYBP (ENSPPAG00000039197) #22 PROK2 (ENSPPAG00000038388) #23 ENSPPAG00000038441 ENSPPAG00000035020 #24 FOXP1 (ENSPPAG00000039148) #25 MDFIC2 (ENSPPAG00000036914) #26 ENSPPAG00000030278 MITF (ENSPPAG00000041237) #27 FRMD4B (ENSPPAG00000021170) #28 LMOD3 (ENSPPAG00000033796) #29 ARL6IP5 (ENSPPAG00000033634) #30 UBA3 (ENSPPAG00000031816) #31 TMF1 (ENSPPAG00000042538) #32 EOGT (ENSPPAG00000040173) #33 TAFA4 (ENSPPAG00000038870) #34 ENSPPAG00000032744 #35 Human MODERN SPECIES 15 POU1F1 (ENSG00000064835) CHMP2B (ENSG00000083937) VGLL3 (ENSG00000206538) CADM2 (ENSG00000175161) GBE1 (ENSG00000114480) ROBO1 (ENSG00000169855) ROBO2 (ENSG00000185008) ZNF717 (ENSG00000227124) FRG2C (ENSG00000172969) CNTN3 (ENSG00000113805) #16 PDZRN3 (ENSG00000121440) #17 EBLN2 (ENSG00000255423) PPP4R2 (ENSG00000163605) #18 GXYLT2 (ENSG00000172986) #20 SHQ1 (ENSG00000144736) #21 RYBP (ENSG00000163602) #22 PROK2 (ENSG00000163421) #23 GPR27 (ENSG00000170837) EIF4E3 (ENSG00000163412) #24 ENSG00000285708 FOXP1 (ENSG00000114861) #25 MDFIC2 (ENSG00000242120) #26 MITF (ENSG00000187098) #27 FRMD4B (ENSG00000114541) #28 LMOD3 (ENSG00000163380) #29 ARL6IP5 (ENSG00000144746) #30 UBA3 (ENSG00000144744) #31 TMF1 (ENSG00000144747) #32 EOGT (ENSG00000163378) #33 TAFA4 (ENSG00000163377) #34 TAFA1 (ENSG00000183662) #35 Laurasiatheria ANCESTRAL SPECIES 2 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Eulipotyphla ANCESTRAL SPECIES ENSGT00390000013995.b.a #22 Hedgehog DUPLICATION Hedgehog MODERN SPECIES 10724 ENSEEUG00000003601 #22 Hedgehog MODERN SPECIES 5610 ENSEEUG00000011620 #22 Common shrew MODERN SPECIES 4363 RYBP (ENSSARG00000011312) #22 Laurasiatheria_a ANCESTRAL SPECIES 3 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Laurasiatheria_b ANCESTRAL SPECIES 2 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Laurasiatheria_c ANCESTRAL SPECIES 2 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Equus ANCESTRAL SPECIES 5 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00940000163880 Donkey MODERN SPECIES 13 SUMF1 (ENSEASG00005003601) #7 ENSEASG00005032131 #8 LRRN1 (ENSEASG00005003592) #9 CRBN (ENSEASG00005003584) #10 TRNT1 (ENSEASG00005003577) #11 IL5RA (ENSEASG00005003564) #12 CNTN4 (ENSEASG00005003558) #13 CNTN6 (ENSEASG00005003549) #14 ENSEASG00005032406 ENSEASG00005002560 #15 ENSEASG00005002280 #16 PDZRN3 (ENSEASG00005002263) #17 PPP4R2 (ENSEASG00005002252) #18 GXYLT2 (ENSEASG00005002247) #20 SHQ1 (ENSEASG00005002237) #21 RYBP (ENSEASG00005029789) #22 PROK2 (ENSEASG00005033363) #23 GPR27 (ENSEASG00005027995) EIF4E3 (ENSEASG00005002204) #24 FOXP1 (ENSEASG00005002186) #25 MDFIC2 (ENSEASG00005002178) #26 MITF (ENSEASG00005002172) #27 FRMD4B (ENSEASG00005002162) #28 LMOD3 (ENSEASG00005002161) #29 ARL6IP5 (ENSEASG00005031455) #30 UBA3 (ENSEASG00005002027) #31 TMF1 (ENSEASG00005001971) #32 EOGT (ENSEASG00005001959) #33 TAFA4 (ENSEASG00005034543) #34 ENSEASG00005030093 SUCLG2 (ENSEASG00005001928) #36 Horse MODERN SPECIES 7 SUMF1 (ENSECAG00000020242) #7 ENSECAG00000011514 #8 LRRN1 (ENSECAG00000002874) #9 CRBN (ENSECAG00000015422) #10 TRNT1 (ENSECAG00000014420) #11 IL5RA (ENSECAG00000022503) #12 CNTN4 (ENSECAG00000009769) #13 CNTN6 (ENSECAG00000015975) #14 ENSECAG00000027842 CHL1 (ENSECAG00000024808) #15 CNTN3 (ENSECAG00000013575) #16 PDZRN3 (ENSECAG00000014864) #17 PPP4R2 (ENSECAG00000000689) #18 GXYLT2 (ENSECAG00000008483) #20 SHQ1 (ENSECAG00000015673) #21 RYBP (ENSECAG00000000266) #22 GPR27 (ENSECAG00000032664) EIF4E3 (ENSECAG00000004471) #24 FOXP1 (ENSECAG00000008974) #25 ENSECAG00000054670 MDFIC2 (ENSECAG00000029574) #26 MITF (ENSECAG00000005360) #27 FRMD4B (ENSECAG00000016131) #28 LMOD3 (ENSECAG00000008709) #29 UBA3 (ENSECAG00000009659) #31 TMF1 (ENSECAG00000023300) #32 EOGT (ENSECAG00000012398) #33 TAFA4 (ENSECAG00000038857) #34 TAFA1 (ENSECAG00000032991) #35 ENSECAG00000029066 SUCLG2 (ENSECAG00000023254) #36 Chiroptera ANCESTRAL SPECIES 49 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Megabat MODERN SPECIES 6134 RYBP (ENSPVAG00000012905) #22 Microchiroptera ANCESTRAL SPECIES 47 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Microbat DUPLICATION Microbat MODERN SPECIES 1446 SHQ1 (ENSMLUG00000013539) #21 ENSMLUG00000030065 ENSMLUG00000012636 #22 Microbat MODERN SPECIES 1497 CCDC167 (ENSMLUG00000006762) ENSMLUG00000006730 RNF8 (ENSMLUG00000013604) TBC1D22B (ENSMLUG00000010533) TMEM217 (ENSMLUG00000023321) ENSMLUG00000015085 #22 PIM1 (ENSMLUG00000014481) FGD2 (ENSMLUG00000001942) Greater horseshoe bat MODERN SPECIES 8 ENSRFEG00010017338 PPP4R2 (ENSRFEG00010017298) #18 GXYLT2 (ENSRFEG00010017092) #20 SHQ1 (ENSRFEG00010017046) #21 ENSRFEG00010017032 RYBP (ENSRFEG00010017002) #22 ENSRFEG00010016965 PROK2 (ENSRFEG00010016865) #23 GPR27 (ENSRFEG00010016845) EIF4E3 (ENSRFEG00010016785) #24 ENSRFEG00010016733 FOXP1 (ENSRFEG00010016312) #25 MDFIC2 (ENSRFEG00010016226) #26 MITF (ENSRFEG00010015864) #27 FRMD4B (ENSRFEG00010015709) #28 LMOD3 (ENSRFEG00010015673) #29 ARL6IP5 (ENSRFEG00010015607) #30 UBA3 (ENSRFEG00010015449) #31 TMF1 (ENSRFEG00010014693) #32 EOGT (ENSRFEG00010014576) #33 TAFA4 (ENSRFEG00010014473) #34 Carnivora ANCESTRAL SPECIES 6 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Caniformia ANCESTRAL SPECIES 4 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Canidae ANCESTRAL SPECIES ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Red fox MODERN SPECIES 5 ENSVVUG00000012624 LRRN1 (ENSVVUG00000012640) #9 CRBN (ENSVVUG00000012661) #10 TRNT1 (ENSVVUG00000012810) #11 IL5RA (ENSVVUG00000012836) #12 CNTN4 (ENSVVUG00000012913) #13 CNTN6 (ENSVVUG00000013018) #14 CHL1 (ENSVVUG00000013809) #15 ENSVVUG00000013836 CNTN3 (ENSVVUG00000013866) #16 ENSVVUG00000013879 #17 ENSVVUG00000013883 PPP4R2 (ENSVVUG00000013896) #18 GXYLT2 (ENSVVUG00000013899) #20 SHQ1 (ENSVVUG00000013906) #21 RYBP (ENSVVUG00000013920) #22 PROK2 (ENSVVUG00000013944) #23 ENSVVUG00000013947 #24 ENSVVUG00000013952 FOXP1 (ENSVVUG00000013954) #25 MDFIC2 (ENSVVUG00000013970) #26 MITF (ENSVVUG00000013975) #27 FRMD4B (ENSVVUG00000014012) #28 LMOD3 (ENSVVUG00000014067) #29 ARL6IP5 (ENSVVUG00000014070) #30 UBA3 (ENSVVUG00000014100) #31 TMF1 (ENSVVUG00000014445) #32 EOGT (ENSVVUG00000014456) #33 FAM19A4 (ENSVVUG00000014489) #34 ENSVVUG00000014499 SUCLG2 (ENSVVUG00000014528) #36 Canis_lupus ANCESTRAL SPECIES 1 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Dingo MODERN SPECIES 401 PPP4R2 (ENSCAFG00020016753) #18 SHQ1 (ENSCAFG00020016743) #21 RYBP (ENSCAFG00020016734) #22 PROK2 (ENSCAFG00020016730) #23 GPR27 (ENSCAFG00020016727) EIF4E3 (ENSCAFG00020016724) #24 FOXP1 (ENSCAFG00020012311) #25 MDFIC2 (ENSCAFG00020012180) #26 MITF (ENSCAFG00020012176) #27 FRMD4B (ENSCAFG00020012082) #28 LMOD3 (ENSCAFG00020012071) #29 ARL6IP5 (ENSCAFG00020012069) #30 UBA3 (ENSCAFG00020012058) #31 TMF1 (ENSCAFG00020011872) #32 EOGT (ENSCAFG00020011855) #33 ENSCAFG00020011853 TAFA4 (ENSCAFG00020011851) #34 ENSCAFG00020011847 Dog MODERN SPECIES 12 LRRN1 (ENSCAFG00845012344) #9 ENSCAFG00845012385 CRBN (ENSCAFG00845012410) #10 TRNT1 (ENSCAFG00845012496) #11 IL5RA (ENSCAFG00845012603) #12 CNTN4 (ENSCAFG00845012710) #13 CNTN6 (ENSCAFG00845005936) #14 ENSCAFG00845006097 #15 ENSCAFG00845006445 ENSCAFG00845006474 CNTN3 (ENSCAFG00845006575) #16 PDZRN3 (ENSCAFG00845006843) #17 PPP4R2 (ENSCAFG00845007022) #18 GXYLT2 (ENSCAFG00845007149) #20 SHQ1 (ENSCAFG00845007261) #21 ENSCAFG00845007398 #22 PROK2 (ENSCAFG00845007491) #23 GPR27 (ENSCAFG00845007528) ENSCAFG00845007732 #24 FOXP1 (ENSCAFG00845008552) #25 MDFIC2 (ENSCAFG00845009570) #26 MITF (ENSCAFG00845009666) #27 FRMD4B (ENSCAFG00845010033) #28 LMOD3 (ENSCAFG00845010392) #29 ARL6IP5 (ENSCAFG00845010437) #30 UBA3 (ENSCAFG00845010556) #31 TMF1 (ENSCAFG00845010825) #32 EOGT (ENSCAFG00845010941) #33 TAFA4 (ENSCAFG00845011056) #34 TAFA1 (ENSCAFG00845011082) #35 SUCLG2 (ENSCAFG00845011161) #36 Caniformia_b ANCESTRAL SPECIES 16 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Ursidae ANCESTRAL SPECIES 11 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080.b #15 ENSGT00390000000263.fb.a ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00940000173944 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.l #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Ursus ANCESTRAL SPECIES 89 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080.b #15 ENSGT00390000000263.fb.a ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00940000173944 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a.l #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Polar bear MODERN SPECIES 251 CRBN (ENSUMAG00000024093) #10 TRNT1 (ENSUMAG00000024092) #11 IL5RA (ENSUMAG00000024091) #12 CNTN4 (ENSUMAG00000024088) #13 CNTN6 (ENSUMAG00000024080) #14 CHL1 (ENSUMAG00000024060) #15 ENSUMAG00000024046 CNTN3 (ENSUMAG00000024039) #16 PDZRN3 (ENSUMAG00000024035) #17 PPP4R2 (ENSUMAG00000024034) #18 GXYLT2 (ENSUMAG00000024033) #20 SHQ1 (ENSUMAG00000024031) #21 ENSUMAG00000024029 RYBP (ENSUMAG00000024028) #22 PROK2 (ENSUMAG00000024025) #23 EIF4E3 (ENSUMAG00000024023) #24 FOXP1 (ENSUMAG00000024020) #25 MDFIC2 (ENSUMAG00000024017) #26 MITF (ENSUMAG00000024001) #27 FRMD4B (ENSUMAG00000023999) #28 ENSUMAG00000023998 LMOD3 (ENSUMAG00000023997) #29 ARL6IP5 (ENSUMAG00000023996) #30 UBA3 (ENSUMAG00000023994) #31 TMF1 (ENSUMAG00000023989) #32 EOGT (ENSUMAG00000023987) #33 TAFA4 (ENSUMAG00000023986) #34 ENSUMAG00000023985 SUCLG2 (ENSUMAG00000023841) #36 American black bear MODERN SPECIES 2642 RYBP (ENSUAMG00000008323) #22 Giant Panda MODERN SPECIES 14 ENSAMEG00000015893 #8 LRRN1 (ENSAMEG00000018835) #9 CRBN (ENSAMEG00000014541) #10 TRNT1 (ENSAMEG00000014520) #11 IL5RA (ENSAMEG00000014490) #12 CNTN4 (ENSAMEG00000014387) #13 CNTN6 (ENSAMEG00000014259) #14 ENSAMEG00000013402 #15 ENSAMEG00000023576 ENSAMEG00000011395 #16 PDZRN3 (ENSAMEG00000025975) #17 PPP4R2 (ENSAMEG00000015164) #18 GXYLT2 (ENSAMEG00000015150) #20 SHQ1 (ENSAMEG00000015140) #21 ENSAMEG00000015139 RYBP (ENSAMEG00000015131) #22 PROK2 (ENSAMEG00000028947) #23 EIF4E3 (ENSAMEG00000015115) #24 FOXP1 (ENSAMEG00000015051) #25 MDFIC2 (ENSAMEG00000025889) #26 MITF (ENSAMEG00000017117) #27 FRMD4B (ENSAMEG00000010064) #28 LMOD3 (ENSAMEG00000010109) #29 ARL6IP5 (ENSAMEG00000010112) #30 UBA3 (ENSAMEG00000010117) #31 TMF1 (ENSAMEG00000010131) #32 EOGT (ENSAMEG00000010169) #33 ENSAMEG00000028238 #34 TAFA1 (ENSAMEG00000025281) #35 SUCLG2 (ENSAMEG00000002805) #36 ENSAMEG00000004042 Mustelinae ANCESTRAL SPECIES 18 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.d #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00910000146944 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831.b #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Ferret MODERN SPECIES 163 CRBN (ENSMPUG00000017018) #10 TRNT1 (ENSMPUG00000017017) #11 IL5RA (ENSMPUG00000017016) #12 CNTN4 (ENSMPUG00000017015) #13 CNTN6 (ENSMPUG00000017014) #14 ENSMPUG00000020110 CHL1 (ENSMPUG00000017013) #15 ENSMPUG00000017012 ENSMPUG00000020109 CNTN3 (ENSMPUG00000017011) #16 ENSMPUG00000017010 PDZRN3 (ENSMPUG00000017009) #17 PPP4R2 (ENSMPUG00000017008) #18 GXYLT2 (ENSMPUG00000017007) #20 SHQ1 (ENSMPUG00000017006) #21 RYBP (ENSMPUG00000017004) #22 PROK2 (ENSMPUG00000017003) #23 EIF4E3 (ENSMPUG00000017002) #24 FOXP1 (ENSMPUG00000017001) #25 MITF (ENSMPUG00000016972) #27 FRMD4B (ENSMPUG00000016969) #28 LMOD3 (ENSMPUG00000016967) #29 ARL6IP5 (ENSMPUG00000016965) #30 UBA3 (ENSMPUG00000016958) #31 TMF1 (ENSMPUG00000016957) #32 EOGT (ENSMPUG00000016952) #33 TAFA4 (ENSMPUG00000016951) #34 SUCLG2 (ENSMPUG00000016950) #36 KBTBD8 (ENSMPUG00000016949) #37 ENSMPUG00000016948 ENSMPUG00000016947 American mink MODERN SPECIES 59 ENSNVIG00000003627 #13 CNTN6 (ENSNVIG00000003539) #14 CHL1 (ENSNVIG00000003410) #15 ENSNVIG00000003360 CNTN3 (ENSNVIG00000003301) #16 PDZRN3 (ENSNVIG00000003190) #17 ENSNVIG00000003138 GXYLT2 (ENSNVIG00000003130) #20 SHQ1 (ENSNVIG00000003089) #21 RYBP (ENSNVIG00000003061) #22 PROK2 (ENSNVIG00000003030) #23 ENSNVIG00000003023 GPR27 (ENSNVIG00000003017) EIF4E3 (ENSNVIG00000002988) #24 ENSNVIG00000002970 FOXP1 (ENSNVIG00000001998) #25 MDFIC2 (ENSNVIG00000001956) #26 MITF (ENSNVIG00000001792) #27 FRMD4B (ENSNVIG00000001725) #28 Felidae ANCESTRAL SPECIES 17 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00390000008694.b.b.d ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Panthera ANCESTRAL SPECIES 1 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00390000008694.b.b.d ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Tiger MODERN SPECIES 84 LRRN1 (ENSPTIG00000003044) #9 CRBN (ENSPTIG00000009377) #10 TRNT1 (ENSPTIG00000011448) #11 IL5RA (ENSPTIG00000012294) #12 CNTN4 (ENSPTIG00000015205) #13 CNTN6 (ENSPTIG00000020221) #14 CHL1 (ENSPTIG00000020653) #15 CNTN3 (ENSPTIG00000009144) #16 PDZRN3 (ENSPTIG00000009301) #17 PPP4R2 (ENSPTIG00000009981) #18 GXYLT2 (ENSPTIG00000010984) #20 SHQ1 (ENSPTIG00000011478) #21 RYBP (ENSPTIG00000012035) #22 PROK2 (ENSPTIG00000012482) #23 EIF4E3 (ENSPTIG00000012645) #24 FOXP1 (ENSPTIG00000013377) #25 MDFIC2 (ENSPTIG00000018110) #26 MITF (ENSPTIG00000018345) #27 Panthera_a ANCESTRAL SPECIES ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 leopard MODERN SPECIES 116 CHL1 (ENSPPRG00000004383) #15 ENSPPRG00000004436 CNTN3 (ENSPPRG00000004510) #16 ENSPPRG00000004594 PDZRN3 (ENSPPRG00000004645) #17 PPP4R2 (ENSPPRG00000004654) #18 GXYLT2 (ENSPPRG00000004662) #20 ENSPPRG00000004671 SHQ1 (ENSPPRG00000004769) #21 RYBP (ENSPPRG00000004794) #22 PROK2 (ENSPPRG00000004876) #23 GPR27 (ENSPPRG00000012074) EIF4E3 (ENSPPRG00000004898) #24 FOXP1 (ENSPPRG00000004953) #25 MDFIC2 (ENSPPRG00000004980) #26 MITF (ENSPPRG00000005395) #27 lion MODERN SPECIES 2 ENSPLOG00000003853 #8 LRRN1 (ENSPLOG00000003838) #9 CRBN (ENSPLOG00000003808) #10 TRNT1 (ENSPLOG00000003771) #11 IL5RA (ENSPLOG00000003728) #12 CNTN4 (ENSPLOG00000003617) #13 ENSPLOG00000003587 CNTN6 (ENSPLOG00000003490) #14 ENSPLOG00000003473 CHL1 (ENSPLOG00000003228) #15 CNTN3 (ENSPLOG00000003083) #16 PDZRN3 (ENSPLOG00000003033) #17 PPP4R2 (ENSPLOG00000002914) #18 GXYLT2 (ENSPLOG00000002888) #20 SHQ1 (ENSPLOG00000002849) #21 RYBP (ENSPLOG00000002820) #22 PROK2 (ENSPLOG00000002807) #23 GPR27 (ENSPLOG00000002789) EIF4E3 (ENSPLOG00000002754) #24 FOXP1 (ENSPLOG00000002481) #25 MDFIC2 (ENSPLOG00000002362) #26 MITF (ENSPLOG00000002275) #27 FRMD4B (ENSPLOG00000002200) #28 LMOD3 (ENSPLOG00000002158) #29 ARL6IP5 (ENSPLOG00000002134) #30 UBA3 (ENSPLOG00000001974) #31 TMF1 (ENSPLOG00000001823) #32 EOGT (ENSPLOG00000001756) #33 TAFA4 (ENSPLOG00000001723) #34 TAFA1 (ENSPLOG00000001704) #35 SUCLG2 (ENSPLOG00000001663) #36 Cat MODERN SPECIES 1 LRRN1 (ENSFCAG00000029530) #9 CRBN (ENSFCAG00000026512) #10 TRNT1 (ENSFCAG00000026805) #11 IL5RA (ENSFCAG00000000652) #12 CNTN4 (ENSFCAG00000000649) #13 ENSFCAG00000052641 CNTN6 (ENSFCAG00000015456) #14 ENSFCAG00000034166 CHL1 (ENSFCAG00000011105) #15 ENSFCAG00000005652 CNTN3 (ENSFCAG00000012778) #16 PDZRN3 (ENSFCAG00000040417) #17 PPP4R2 (ENSFCAG00000029481) #18 GXYLT2 (ENSFCAG00000011005) #20 SHQ1 (ENSFCAG00000012781) #21 RYBP (ENSFCAG00000043691) #22 PROK2 (ENSFCAG00000032697) #23 GPR27 (ENSFCAG00000041717) EIF4E3 (ENSFCAG00000025548) #24 FOXP1 (ENSFCAG00000023059) #25 MDFIC2 (ENSFCAG00000026251) #26 MITF (ENSFCAG00000024419) #27 ENSFCAG00000034689 FRMD4B (ENSFCAG00000009021) #28 LMOD3 (ENSFCAG00000009020) #29 ARL6IP5 (ENSFCAG00000041359) #30 UBA3 (ENSFCAG00000023111) #31 TMF1 (ENSFCAG00000027162) #32 EOGT (ENSFCAG00000006082) #33 TAFA4 (ENSFCAG00000031787) #34 TAFA1 (ENSFCAG00000041196) #35 Artiodactyla ANCESTRAL SPECIES 2 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Suina ANCESTRAL SPECIES 1 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Chacoan peccary MODERN SPECIES 950 SUMF1 (ENSCWAG00000021351) #7 ENSCWAG00000021337 #8 LRRN1 (ENSCWAG00000021333) #9 CRBN (ENSCWAG00000021315) #10 TRNT1 (ENSCWAG00000021303) #11 IL5RA (ENSCWAG00000021262) #12 CNTN4 (ENSCWAG00000021224) #13 ENSCWAG00000021205 CNTN6 (ENSCWAG00000021190) #14 CHL1 (ENSCWAG00000021043) #15 CNTN3 (ENSCWAG00000020972) #16 PDZRN3 (ENSCWAG00000020942) #17 PPP4R2 (ENSCWAG00000020926) #18 GXYLT2 (ENSCWAG00000020910) #20 SHQ1 (ENSCWAG00000020894) #21 RYBP (ENSCWAG00000020884) #22 PROK2 (ENSCWAG00000020863) #23 GPR27 (ENSCWAG00000020855) EIF4E3 (ENSCWAG00000020836) #24 FOXP1 (ENSCWAG00000019255) #25 MDFIC2 (ENSCWAG00000019169) #26 MITF (ENSCWAG00000018514) #27 FRMD4B (ENSCWAG00000018343) #28 LMOD3 (ENSCWAG00000018312) #29 ARL6IP5 (ENSCWAG00000018288) #30 UBA3 (ENSCWAG00000017763) #31 TMF1 (ENSCWAG00000017660) #32 EOGT (ENSCWAG00000017579) #33 TAFA4 (ENSCWAG00000017540) #34 TAFA1 (ENSCWAG00000017513) #35 SUCLG2 (ENSCWAG00000017444) #36 Pig MODERN SPECIES 4 CNTN6 (ENSSSCG00000038152) #14 CHL1 (ENSSSCG00000011524) #15 ENSSSCG00000050663 ENSSSCG00000048446 ENSSSCG00000058117 ENSSSCG00000048746 CNTN3 (ENSSSCG00000011522) #16 ENSSSCG00000047664 ENSSSCG00000051504 ENSSSCG00000047927 PDZRN3 (ENSSSCG00000011521) #17 ENSSSCG00000041059 PPP4R2 (ENSSSCG00000037216) #18 GXYLT2 (ENSSSCG00000011519) #20 SHQ1 (ENSSSCG00000011518) #21 RYBP (ENSSSCG00000025053) #22 PROK2 (ENSSSCG00000026200) #23 GPR27 (ENSSSCG00000036580) EIF4E3 (ENSSSCG00000011516) #24 FOXP1 (ENSSSCG00000027675) #25 MDFIC2 (ENSSSCG00000060340) #26 ENSSSCG00000045079 MITF (ENSSSCG00000011514) #27 FRMD4B (ENSSSCG00000011511) #28 LMOD3 (ENSSSCG00000052599) #29 ARL6IP5 (ENSSSCG00000033154) #30 UBA3 (ENSSSCG00000011506) #31 TMF1 (ENSSSCG00000011510) #32 EOGT (ENSSSCG00000011504) #33 TAFA4 (ENSSSCG00000033199) #34 ENSSSCG00000036134 Artiodactyla_a ANCESTRAL SPECIES 18 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Camelidae ANCESTRAL SPECIES 7 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Arabian camel MODERN SPECIES 8 ENSCDRG00005006638 #8 LRRN1 (ENSCDRG00005006616) #9 CRBN (ENSCDRG00005006474) #10 IL5RA (ENSCDRG00005006219) #12 TRNT1 (ENSCDRG00005006181) #11 CNTN4 (ENSCDRG00005006128) #13 ENSCDRG00005006107 CNTN6 (ENSCDRG00005006079) #14 CHL1 (ENSCDRG00005005966) #15 ENSCDRG00005005931 CNTN3 (ENSCDRG00005005902) #16 PDZRN3 (ENSCDRG00005005789) #17 PPP4R2 (ENSCDRG00005005747) #18 GXYLT2 (ENSCDRG00005005730) #20 SHQ1 (ENSCDRG00005005675) #21 RYBP (ENSCDRG00005005642) #22 PROK2 (ENSCDRG00005005609) #23 GPR27 (ENSCDRG00005005582) EIF4E3 (ENSCDRG00005005567) #24 FOXP1 (ENSCDRG00005003812) #25 MDFIC2 (ENSCDRG00005003702) #26 MITF (ENSCDRG00005003570) #27 FRMD4B (ENSCDRG00005003460) #28 LMOD3 (ENSCDRG00005003378) #29 ARL6IP5 (ENSCDRG00005021188) #30 UBA3 (ENSCDRG00005021145) #31 TMF1 (ENSCDRG00005021118) #32 EOGT (ENSCDRG00005021103) #33 TAFA4 (ENSCDRG00005021091) #34 TAFA1 (ENSCDRG00005021082) #35 SUCLG2 (ENSCDRG00005021068) #36 Alpaca MODERN SPECIES 4562 RYBP (ENSVPAG00000007715) #22 Artiodactyla_b ANCESTRAL SPECIES 21 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Cetacea ANCESTRAL SPECIES 7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000006922.m.b.a.d ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Odontoceti ANCESTRAL SPECIES 5 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00390000012652.ab.a.k ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000006922.m.b.a.d ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Sperm whale MODERN SPECIES 9 IL5RA (ENSPCTG00005011305) #12 CNTN4 (ENSPCTG00005011901) #13 CNTN6 (ENSPCTG00005016124) #14 ENSPCTG00005016393 CHL1 (ENSPCTG00005016433) #15 ENSPCTG00005016580 CNTN3 (ENSPCTG00005016649) #16 ENSPCTG00005016762 PDZRN3 (ENSPCTG00005016884) #17 ENSPCTG00005017078 ENSPCTG00005017126 PPP4R2 (ENSPCTG00005017140) #18 GXYLT2 (ENSPCTG00005017189) #20 SHQ1 (ENSPCTG00005017281) #21 ENSPCTG00005008959 RYBP (ENSPCTG00005008989) #22 PROK2 (ENSPCTG00005009087) #23 GPR27 (ENSPCTG00005009164) EIF4E3 (ENSPCTG00005009184) #24 FOXP1 (ENSPCTG00005009284) #25 MDFIC2 (ENSPCTG00005009636) #26 MITF (ENSPCTG00005009685) #27 ENSPCTG00005009977 FRMD4B (ENSPCTG00005010026) #28 LMOD3 (ENSPCTG00005010268) #29 ARL6IP5 (ENSPCTG00005010327) #30 UBA3 (ENSPCTG00005010435) #31 TMF1 (ENSPCTG00005010922) #32 EOGT (ENSPCTG00005011366) #33 TAFA4 (ENSPCTG00005011477) #34 TAFA1 (ENSPCTG00005011548) #35 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00390000012652.ab.a.k ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000006922.m.b.a.d ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Dolphin MODERN SPECIES 4653 SHQ1 (ENSTTRG00000005320) #21 RYBP (ENSTTRG00000005375) #22 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000168733 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00390000012652.ab.a.k ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000006922.m.b.a.d ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Monodontidae ANCESTRAL SPECIES 4 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT01000000221469 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000168733 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00390000012652.ab.a.k ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000006922.m.b.a.d ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Narwhal MODERN SPECIES 310 IL5RA (ENSMMNG00015021373) #12 CNTN4 (ENSMMNG00015021354) #13 ENSMMNG00015021339 CNTN6 (ENSMMNG00015021308) #14 CHL1 (ENSMMNG00015021112) #15 ENSMMNG00015020993 CNTN3 (ENSMMNG00015020954) #16 ENSMMNG00015020932 ENSMMNG00015020925 PDZRN3 (ENSMMNG00015020829) #17 ENSMMNG00015020797 PPP4R2 (ENSMMNG00015020763) #18 GXYLT2 (ENSMMNG00015020737) #20 SHQ1 (ENSMMNG00015020699) #21 ENSMMNG00015020691 RYBP (ENSMMNG00015020675) #22 PROK2 (ENSMMNG00015020659) #23 GPR27 (ENSMMNG00015020647) EIF4E3 (ENSMMNG00015020620) #24 ENSMMNG00015020607 FOXP1 (ENSMMNG00015020256) #25 MDFIC2 (ENSMMNG00015020084) #26 MITF (ENSMMNG00015020021) #27 FRMD4B (ENSMMNG00015019966) #28 LMOD3 (ENSMMNG00015019939) #29 ARL6IP5 (ENSMMNG00015019913) #30 UBA3 (ENSMMNG00015019640) #31 TMF1 (ENSMMNG00015019536) #32 EOGT (ENSMMNG00015019482) #33 ENSMMNG00015019447 TAFA4 (ENSMMNG00015019429) #34 Beluga whale MODERN SPECIES 28 CRBN (ENSDLEG00000004288) #10 TRNT1 (ENSDLEG00000004312) #11 IL5RA (ENSDLEG00000004345) #12 CNTN4 (ENSDLEG00000004410) #13 ENSDLEG00000004457 CNTN6 (ENSDLEG00000004824) #14 CHL1 (ENSDLEG00000007131) #15 ENSDLEG00000007271 CNTN3 (ENSDLEG00000007338) #16 ENSDLEG00000007610 PDZRN3 (ENSDLEG00000007615) #17 ENSDLEG00000007621 PPP4R2 (ENSDLEG00000007632) #20 SHQ1 (ENSDLEG00000007662) #21 ENSDLEG00000007675 RYBP (ENSDLEG00000007680) #22 PROK2 (ENSDLEG00000007684) #23 GPR27 (ENSDLEG00000007689) EIF4E3 (ENSDLEG00000007693) #24 FOXP1 (ENSDLEG00000007703) #25 MDFIC2 (ENSDLEG00000007714) #26 MITF (ENSDLEG00000007717) #27 ENSDLEG00000007725 FRMD4B (ENSDLEG00000007734) #28 LMOD3 (ENSDLEG00000007747) #29 ARL6IP5 (ENSDLEG00000007750) #30 UBA3 (ENSDLEG00000007767) #31 TMF1 (ENSDLEG00000007791) #32 EOGT (ENSDLEG00000007861) #33 TAFA4 (ENSDLEG00000007891) #34 ENSDLEG00000007893 Vaquita MODERN SPECIES 2 TRNT1 (ENSPSNG00000021385) #11 IL5RA (ENSPSNG00000021430) #12 CNTN4 (ENSPSNG00000021522) #13 ENSPSNG00000021554 CNTN6 (ENSPSNG00000021579) #14 CHL1 (ENSPSNG00000021694) #15 ENSPSNG00000021840 CNTN3 (ENSPSNG00000021869) #16 ENSPSNG00000021907 PDZRN3 (ENSPSNG00000021932) #17 ENSPSNG00000021970 PPP4R2 (ENSPSNG00000021989) #18 GXYLT2 (ENSPSNG00000022011) #20 SHQ1 (ENSPSNG00000022028) #21 ENSPSNG00000022044 RYBP (ENSPSNG00000022051) #22 PROK2 (ENSPSNG00000022078) #23 GPR27 (ENSPSNG00000022094) EIF4E3 (ENSPSNG00000009818) #24 FOXP1 (ENSPSNG00000010176) #25 MDFIC2 (ENSPSNG00000011225) #26 MITF (ENSPSNG00000011317) #27 ENSPSNG00000011931 ENSPSNG00000011964 FRMD4B (ENSPSNG00000012000) #28 ENSPSNG00000012258 LMOD3 (ENSPSNG00000012275) #29 ARL6IP5 (ENSPSNG00000012328) #30 UBA3 (ENSPSNG00000012433) #31 TMF1 (ENSPSNG00000012619) #32 EOGT (ENSPSNG00000012709) #33 Blue whale MODERN SPECIES 2 CRBN (ENSBMSG00010022093) #10 TRNT1 (ENSBMSG00010022089) #11 IL5RA (ENSBMSG00010022077) #12 CNTN4 (ENSBMSG00010022067) #13 CNTN6 (ENSBMSG00010022054) #14 CHL1 (ENSBMSG00010022027) #15 ENSBMSG00010022002 CNTN3 (ENSBMSG00010021994) #16 ENSBMSG00010021989 ENSBMSG00010021985 PDZRN3 (ENSBMSG00010021981) #17 PPP4R2 (ENSBMSG00010021970) #18 GXYLT2 (ENSBMSG00010021967) #20 SHQ1 (ENSBMSG00010021956) #21 ENSBMSG00010021950 RYBP (ENSBMSG00010021945) #22 PROK2 (ENSBMSG00010021941) #23 GPR27 (ENSBMSG00010021933) EIF4E3 (ENSBMSG00010021929) #24 FOXP1 (ENSBMSG00010021028) #25 ENSBMSG00010020804 MDFIC2 (ENSBMSG00010020784) #26 MITF (ENSBMSG00010019612) #27 ENSBMSG00010019391 ENSBMSG00010019371 ENSBMSG00010019343 FRMD4B (ENSBMSG00010019228) #28 LMOD3 (ENSBMSG00010019153) #29 ARL6IP5 (ENSBMSG00010019130) #30 UBA3 (ENSBMSG00010018750) #31 TMF1 (ENSBMSG00010018575) #32 Pecora ANCESTRAL SPECIES 17 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Yarkand deer MODERN SPECIES 16 ENSCHYG00000026754 CRBN (ENSCHYG00000026738) #10 TRNT1 (ENSCHYG00000026731) #11 IL5RA (ENSCHYG00000026716) #12 CNTN4 (ENSCHYG00000026696) #13 ENSCHYG00000026687 ENSCHYG00000026685 CNTN6 (ENSCHYG00000026622) #14 ENSCHYG00000026610 CHL1 (ENSCHYG00000026559) #15 CNTN3 (ENSCHYG00000026470) #16 PDZRN3 (ENSCHYG00000026403) #17 PPP4R2 (ENSCHYG00000026369) #18 GXYLT2 (ENSCHYG00000026357) #20 SHQ1 (ENSCHYG00000026306) #21 RYBP (ENSCHYG00000026283) #22 PROK2 (ENSCHYG00000026260) #23 EIF4E3 (ENSCHYG00000026240) #24 FOXP1 (ENSCHYG00000024873) #25 ENSCHYG00000024728 MDFIC2 (ENSCHYG00000024686) #26 MITF (ENSCHYG00000024471) #27 ENSCHYG00000024373 ENSCHYG00000024354 FRMD4B (ENSCHYG00000023741) #28 LMOD3 (ENSCHYG00000023655) #29 ARL6IP5 (ENSCHYG00000023632) #30 UBA3 (ENSCHYG00000023036) #31 TMF1 (ENSCHYG00000022757) #32 EOGT (ENSCHYG00000022524) #33 TAFA4 (ENSCHYG00000022432) #34 Percora_a ANCESTRAL SPECIES 19 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Siberian musk deer MODERN SPECIES 1222 CHL1 (ENSMMSG00000016568) #15 ENSMMSG00000016517 CNTN3 (ENSMMSG00000016378) #16 PDZRN3 (ENSMMSG00000016262) #17 PPP4R2 (ENSMMSG00000016216) #18 GXYLT2 (ENSMMSG00000016163) #20 SHQ1 (ENSMMSG00000016133) #21 RYBP (ENSMMSG00000016107) #22 PROK2 (ENSMMSG00000016060) #23 GPR27 (ENSMMSG00000016039) EIF4E3 (ENSMMSG00000015972) #24 FOXP1 (ENSMMSG00000014620) #25 MDFIC2 (ENSMMSG00000014534) #26 MITF (ENSMMSG00000013971) #27 FRMD4B (ENSMMSG00000013878) #28 LMOD3 (ENSMMSG00000013861) #29 ARL6IP5 (ENSMMSG00000013836) #30 UBA3 (ENSMMSG00000013729) #31 TMF1 (ENSMMSG00000013641) #32 EOGT (ENSMMSG00000021538) #33 TAFA4 (ENSMMSG00000021498) #34 TAFA1 (ENSMMSG00000021464) #35 SUCLG2 (ENSMMSG00000021420) #36 Bovidae ANCESTRAL SPECIES 19 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000153886.a.a.k.b.b ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Caprinae ANCESTRAL SPECIES 15 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000153886.a.a.k.b.b ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Goat MODERN SPECIES 14 ENSCHIG00000019739 #8 LRRN1 (ENSCHIG00000009563) #9 ENSCHIG00000017211 CRBN (ENSCHIG00000022897) #10 TRNT1 (ENSCHIG00000007030) #11 IL5RA (ENSCHIG00000011708) #12 CNTN4 (ENSCHIG00000018077) #13 CNTN6 (ENSCHIG00000024913) #14 CHL1 (ENSCHIG00000015409) #15 CNTN3 (ENSCHIG00000015485) #16 ENSCHIG00000022511 PDZRN3 (ENSCHIG00000018984) #17 PPP4R2 (ENSCHIG00000006838) #18 GXYLT2 (ENSCHIG00000011713) #20 SHQ1 (ENSCHIG00000012271) #21 RYBP (ENSCHIG00000026041) #22 ENSCHIG00000012364 PROK2 (ENSCHIG00000020872) #23 GPR27 (ENSCHIG00000006038) EIF4E3 (ENSCHIG00000024333) #24 FOXP1 (ENSCHIG00000017707) #25 MDFIC2 (ENSCHIG00000017880) #26 MITF (ENSCHIG00000022111) #27 ENSCHIG00000014889 FRMD4B (ENSCHIG00000015488) #28 LMOD3 (ENSCHIG00000017627) #29 ARL6IP5 (ENSCHIG00000021517) #30 UBA3 (ENSCHIG00000015026) #31 TMF1 (ENSCHIG00000012583) #32 EOGT (ENSCHIG00000014149) #33 TAFA4 (ENSCHIG00000013665) #34 Rambouillet Sheep MODERN SPECIES 10 SUMF1 (ENSOARG00020014038) #7 ENSOARG00020014205 #8 LRRN1 (ENSOARG00020014291) #9 ENSOARG00020014311 CRBN (ENSOARG00020014355) #10 TRNT1 (ENSOARG00020014826) #11 CNTN4 (ENSOARG00020015064) #13 ENSOARG00020015490 CNTN6 (ENSOARG00020015543) #14 CHL1 (ENSOARG00020015831) #15 CNTN3 (ENSOARG00020016622) #16 PDZRN3 (ENSOARG00020016919) #17 PPP4R2 (ENSOARG00020017177) #18 GXYLT2 (ENSOARG00020017381) #20 SHQ1 (ENSOARG00020017477) #21 RYBP (ENSOARG00020017720) #22 PROK2 (ENSOARG00020017771) #23 GPR27 (ENSOARG00020017874) FOXP1 (ENSOARG00020017991) #25 MDFIC2 (ENSOARG00020020710) #26 MITF (ENSOARG00020020821) #27 FRMD4B (ENSOARG00020021286) #28 ENSOARG00020021609 LMOD3 (ENSOARG00020021653) #29 ARL6IP5 (ENSOARG00020021679) #30 UBA3 (ENSOARG00020021782) #31 TMF1 (ENSOARG00020022407) #32 EOGT (ENSOARG00020022578) #33 TAFA1 (ENSOARG00020022813) #35 SUCLG2 (ENSOARG00020022864) #36 ENSOARG00020023030 Bovinae ANCESTRAL SPECIES 16 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT00940000153886.a.a.k.b.b ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Bos ANCESTRAL SPECIES 16 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.a.a #14 ENSGT00940000160606.b #14 ENSGT00940000160080 #15 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00940000162026.b #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00940000156326 #27 ENSGT00940000153886.a.a.k.b.b ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00550000074831 #31 ENSGT00390000010697 #32 Bos_a ANCESTRAL SPECIES 9 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.a.a #14 ENSGT00940000160606.b #14 ENSGT00940000160080 #15 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00940000162026.b #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Wild yak MODERN SPECIES 2547 RYBP (ENSBMUG00000026725) #22 PROK2 (ENSBMUG00000026726) #23 EIF4E3 (ENSBMUG00000026727) #24 FOXP1 (ENSBMUG00000026730) #25 Domestic yak MODERN SPECIES 14 ENSBGRG00000022956 ENSBGRG00000022946 CNTN6 (ENSBGRG00000022913) #14 CHL1 (ENSBGRG00000022502) #15 ENSBGRG00000022415 CNTN3 (ENSBGRG00000022216) #16 ENSBGRG00000022179 ENSBGRG00000022160 PDZRN3 (ENSBGRG00000022106) #17 PPP4R2 (ENSBGRG00000022002) #18 ENSBGRG00000021987 GXYLT2 (ENSBGRG00000021905) #20 SHQ1 (ENSBGRG00000021832) #21 ENSBGRG00000021818 ENSBGRG00000021805 RYBP (ENSBGRG00000021759) #22 ENSBGRG00000021736 PROK2 (ENSBGRG00000021693) #23 GPR27 (ENSBGRG00000021670) EIF4E3 (ENSBGRG00000021497) #24 ENSBGRG00000021458 FOXP1 (ENSBGRG00000019865) #25 MDFIC2 (ENSBGRG00000019713) #26 ENSBGRG00000019667 MITF (ENSBGRG00000018873) #27 FRMD4B (ENSBGRG00000017724) #28 ENSBGRG00000017643 LMOD3 (ENSBGRG00000017594) #29 ARL6IP5 (ENSBGRG00000017445) #30 ENSBGRG00000017411 UBA3 (ENSBGRG00000016525) #31 Bos_b ANCESTRAL SPECIES 17 ENSGT00940000162732 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606.a.a #14 ENSGT00940000160080 #15 ENSGT01100000263481.n.a.a.a.b.a.b.a.b.a.a.b.b.b.b ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.b.a.a.b ENSGT00940000162026.b #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00940000156326 #27 ENSGT00940000153886.a.a.k.b.b ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.a.a ENSGT00550000074831 #31 ENSGT00390000010697 #32 Cow MODERN SPECIES 14 ENSBTAG00000034496 SETMAR (ENSBTAG00000018935) #8 LRRN1 (ENSBTAG00000001176) #9 CRBN (ENSBTAG00000019536) #10 TRNT1 (ENSBTAG00000019534) #11 IL5RA (ENSBTAG00000000273) #12 CNTN4 (ENSBTAG00000033225) #13 CNTN6 (ENSBTAG00000003592) #14 ENSBTAG00000006727 CHL1 (ENSBTAG00000002471) #15 CNTN3 (ENSBTAG00000007615) #16 PDZRN3 (ENSBTAG00000018644) #17 PPP4R2 (ENSBTAG00000002147) #18 GXYLT2 (ENSBTAG00000020481) #20 SHQ1 (ENSBTAG00000005436) #21 RYBP (ENSBTAG00000022689) #22 ENSBTAG00000054670 PROK2 (ENSBTAG00000019330) #23 GPR27 (ENSBTAG00000053030) EIF4E3 (ENSBTAG00000018862) #24 FOXP1 (ENSBTAG00000016533) #25 MDFIC2 (ENSBTAG00000048900) #26 ENSBTAG00000009220 MITF (ENSBTAG00000006679) #27 FRMD4B (ENSBTAG00000007624) #28 ENSBTAG00000013059 LMOD3 (ENSBTAG00000021508) #29 ARL6IP5 (ENSBTAG00000021506) #30 UBA3 (ENSBTAG00000015556) #31 TMF1 (ENSBTAG00000015554) #32 EOGT (ENSBTAG00000022681) #33 Hybrid Bos Indicus MODERN SPECIES 14 LRRN1 (ENSBIXG00005031456) #9 CRBN (ENSBIXG00005031447) #10 TRNT1 (ENSBIXG00005031446) #11 IL5RA (ENSBIXG00005031445) #12 CNTN4 (ENSBIXG00005031442) #13 CNTN6 (ENSBIXG00005031434) #14 ENSBIXG00005031428 CHL1 (ENSBIXG00005031410) #15 ENSBIXG00005031401 CNTN3 (ENSBIXG00005031394) #16 PDZRN3 (ENSBIXG00005031380) #17 PPP4R2 (ENSBIXG00005031369) #18 GXYLT2 (ENSBIXG00005031365) #20 ENSBIXG00005031363 SHQ1 (ENSBIXG00005031362) #21 RYBP (ENSBIXG00005031352) #22 ENSBIXG00005031346 #23 GPR27 (ENSBIXG00005031343) EIF4E3 (ENSBIXG00005031340) #24 FOXP1 (ENSBIXG00005031327) #25 MDFIC2 (ENSBIXG00005031313) #26 ENSBIXG00005031312 MITF (ENSBIXG00005031308) #27 ENSBIXG00005031303 ENSBIXG00005031301 FRMD4B (ENSBIXG00005031293) #28 LMOD3 (ENSBIXG00005031283) #29 ARL6IP5 (ENSBIXG00005031280) #30 ENSBIXG00005031278 UBA3 (ENSBIXG00005031275) #31 TMF1 (ENSBIXG00005031267) #32 American bison MODERN SPECIES 3333 IL5RA (ENSBBBG00000008533) #12 CNTN4 (ENSBBBG00000022563) #13 CNTN6 (ENSBBBG00000022607) #14 CHL1 (ENSBBBG00000022795) #15 CNTN3 (ENSBBBG00000022837) #16 PDZRN3 (ENSBBBG00000022898) #17 PPP4R2 (ENSBBBG00000008134) #18 GXYLT2 (ENSBBBG00000022931) #20 SHQ1 (ENSBBBG00000006026) #21 RYBP (ENSBBBG00000006031) #22 PROK2 (ENSBBBG00000022995) #23 EIF4E3 (ENSBBBG00000023020) #24 FOXP1 (ENSBBBG00000023930) #25 MDFIC2 (ENSBBBG00000006278) #26 MITF (ENSBBBG00000009019) #27 ENSBBBG00000006419 FRMD4B (ENSBBBG00000006453) #28 LMOD3 (ENSBBBG00000000194) #29 ENSBBBG00000000181 #30 UBA3 (ENSBBBG00000007824) #31 TMF1 (ENSBBBG00000008082) #32 EOGT (ENSBBBG00000025364) #33 Atlantogenata ANCESTRAL SPECIES 34 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00390000010170.a.a #36 ENSGT00940000158653 #37 ENSGT00940000158502 Afrotheria ANCESTRAL SPECIES 32 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00390000010170.a.a #36 ENSGT00940000158653 #37 ENSGT00940000158502 ENSGT00550000074950 Afrotheria_a ANCESTRAL SPECIES 32 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00390000010170.a.a #36 ENSGT00940000158653 #37 ENSGT00940000158502 ENSGT00550000074950 Elephant MODERN SPECIES 49 ENSLAFG00000026765 #8 LRRN1 (ENSLAFG00000010287) #9 CRBN (ENSLAFG00000017627) #10 TRNT1 (ENSLAFG00000023191) #11 IL5RA (ENSLAFG00000011644) #12 CNTN4 (ENSLAFG00000011631) #13 CNTN6 (ENSLAFG00000008927) #14 CHL1 (ENSLAFG00000000179) #15 CNTN3 (ENSLAFG00000008082) #16 ENSLAFG00000031602 ENSLAFG00000026536 PDZRN3 (ENSLAFG00000014734) #17 PPP4R2 (ENSLAFG00000000513) #18 GXYLT2 (ENSLAFG00000017357) #20 ENSLAFG00000017601 #21 RYBP (ENSLAFG00000003133) #22 GPR27 (ENSLAFG00000015911) EIF4E3 (ENSLAFG00000001998) #24 FOXP1 (ENSLAFG00000008006) #25 MITF (ENSLAFG00000023153) #27 FRMD4B (ENSLAFG00000001441) #28 LMOD3 (ENSLAFG00000032473) #29 ARL6IP5 (ENSLAFG00000004092) #30 UBA3 (ENSLAFG00000004088) #31 TMF1 (ENSLAFG00000004084) #32 EOGT (ENSLAFG00000004080) #33 TAFA4 (ENSLAFG00000004079) #34 SUCLG2 (ENSLAFG00000015283) #36 KBTBD8 (ENSLAFG00000002923) #37 ENSLAFG00000013671 SLC25A26 (ENSLAFG00000013666) Hyrax MODERN SPECIES 4626 RYBP (ENSPCAG00000014954) #22 Tenrec MODERN SPECIES 5459 RYBP (ENSETEG00000015145) #22 Xenarthra ANCESTRAL SPECIES 1203 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 Sloth MODERN SPECIES 5002 RYBP (ENSCHOG00000011528) #22 Armadillo MODERN SPECIES 1343 ENSDNOG00000038146 #18 GXYLT2 (ENSDNOG00000036560) #20 SHQ1 (ENSDNOG00000033937) #21 RYBP (ENSDNOG00000034094) #22 Marsupialia ANCESTRAL SPECIES 14 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Marsupialia_b ANCESTRAL SPECIES 14 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Diprotodontia ANCESTRAL SPECIES 12 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Diprotodontia_a ANCESTRAL SPECIES 10 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Common wonbat MODERN SPECIES 1012 IL5RA (ENSVURG00010008982) #12 CNTN4 (ENSVURG00010008887) #13 ENSVURG00010008854 ENSVURG00010008843 CNTN6 (ENSVURG00010008756) #14 ENSVURG00010008727 CHL1 (ENSVURG00010008642) #15 CNTN3 (ENSVURG00010008586) #16 ENSVURG00010008548 PDZRN3 (ENSVURG00010008505) #17 ENSVURG00010008462 PPP4R2 (ENSVURG00010008448) #18 GXYLT2 (ENSVURG00010008424) #20 ENSVURG00010008413 SHQ1 (ENSVURG00010008402) #21 RYBP (ENSVURG00010008342) #22 PROK2 (ENSVURG00010008305) #23 ENSVURG00010008299 ENSVURG00010008289 EIF4E3 (ENSVURG00010008277) #24 FOXP1 (ENSVURG00010008144) #25 MDFIC2 (ENSVURG00010008101) #26 MITF (ENSVURG00010007937) #27 FRMD4B (ENSVURG00010007860) #28 LMOD3 (ENSVURG00010007809) #29 ARL6IP5 (ENSVURG00010007801) #30 UBA3 (ENSVURG00010007758) #31 TMF1 (ENSVURG00010007723) #32 EOGT (ENSVURG00010007661) #33 TAFA4 (ENSVURG00010007643) #34 TAFA1 (ENSVURG00010007612) #35 koala MODERN SPECIES 122 CNTN3 (ENSPCIG00000019536) #16 PDZRN3 (ENSPCIG00000003575) #17 PPP4R2 (ENSPCIG00000003553) #18 GXYLT2 (ENSPCIG00000003536) #20 SHQ1 (ENSPCIG00000033419) #21 RYBP (ENSPCIG00000035828) #22 PROK2 (ENSPCIG00000035580) #23 ENSPCIG00000007180 GPR27 (ENSPCIG00000007179) EIF4E3 (ENSPCIG00000011825) #24 FOXP1 (ENSPCIG00000011818) #25 MDFIC2 (ENSPCIG00000011815) #26 MITF (ENSPCIG00000011814) #27 FRMD4B (ENSPCIG00000011810) #28 LMOD3 (ENSPCIG00000011808) #29 ARL6IP5 (ENSPCIG00000011806) #30 UBA3 (ENSPCIG00000010311) #31 TMF1 (ENSPCIG00000010308) #32 EOGT (ENSPCIG00000010307) #33 TAFA4 (ENSPCIG00000009587) #34 ENSPCIG00000035890 Tasmanian devil MODERN SPECIES ENSSHAG00000012663 SUMF1 (ENSSHAG00000022459) #7 ENSSHAG00000030072 #8 LRRN1 (ENSSHAG00000027597) #9 CRBN (ENSSHAG00000029768) #10 TRNT1 (ENSSHAG00000018861) #11 IL5RA (ENSSHAG00000018837) #12 CNTN4 (ENSSHAG00000018520) #13 CNTN6 (ENSSHAG00000015764) #14 ENSSHAG00000010125 #15 ENSSHAG00000010121 #16 PDZRN3 (ENSSHAG00000016709) #17 PPP4R2 (ENSSHAG00000015837) #18 GXYLT2 (ENSSHAG00000015594) #20 SHQ1 (ENSSHAG00000015077) #21 ENSSHAG00000013359 #22 ENSSHAG00000031144 #23 GPR27 (ENSSHAG00000022511) EIF4E3 (ENSSHAG00000008775) #24 FOXP1 (ENSSHAG00000026979) #25 MDFIC2 (ENSSHAG00000030086) #26 MITF (ENSSHAG00000017522) #27 FRMD4B (ENSSHAG00000013729) #28 LMOD3 (ENSSHAG00000016539) #29 ARL6IP5 (ENSSHAG00000029654) #30 TMF1 (ENSSHAG00000016301) #32 UBA3 (ENSSHAG00000016367) #31 EOGT (ENSSHAG00000016174) #33 TAFA4 (ENSSHAG00000024690) #34 ENSSHAG00000025563 SUCLG2 (ENSSHAG00000029903) #36 Opossum MODERN SPECIES 5 TRNT1 (ENSMODG00000004368) #11 ENSMODG00000004351 #12 CNTN4 (ENSMODG00000004323) #13 ENSMODG00000028686 ENSMODG00000048583 ENSMODG00000051590 CNTN6 (ENSMODG00000004198) #14 CHL1 (ENSMODG00000004153) #15 ENSMODG00000046603 ENSMODG00000049888 CNTN3 (ENSMODG00000003991) #16 PDZRN3 (ENSMODG00000003959) #17 PPP4R2 (ENSMODG00000003940) #18 GXYLT2 (ENSMODG00000003929) #20 SHQ1 (ENSMODG00000003926) #21 RYBP (ENSMODG00000038209) #22 PROK2 (ENSMODG00000043726) #23 GPR27 (ENSMODG00000003902) EIF4E3 (ENSMODG00000003899) #24 FOXP1 (ENSMODG00000003884) #25 ENSMODG00000027781 MDFIC2 (ENSMODG00000028056) #26 ENSMODG00000028024 ENSMODG00000039201 MITF (ENSMODG00000003754) #27 FRMD4B (ENSMODG00000003688) #28 LMOD3 (ENSMODG00000003639) #29 ARL6IP5 (ENSMODG00000049779) #30 UBA3 (ENSMODG00000003622) #31 TMF1 (ENSMODG00000003468) #32 ENSMODG00000003450 #33 Platypus DUPLICATION Platypus MODERN SPECIES 35 THAP11Y (ENSOANG00000039397) ENSOANG00000045879 ENSOANG00000039507 ENSOANG00000043592 RYBP (ENSOANG00000050562) #22 ENSOANG00000038226 ENSOANG00000043879 ENSOANG00000038599 ENSOANG00000045913 FEM1C (ENSOANG00000037326) ENSOANG00000045434 CNBP (ENSOANG00000040160) AKAP8LY (ENSOANG00000047029) ENSOANG00000044776 ENSOANG00000037290 ENSOANG00000037198 ENSOANG00000038603 ENSOANG00000048071 ENSOANG00000046095 AMHY (ENSOANG00000049951) Platypus MODERN SPECIES 84 ENSOANG00000037378 RHO (ENSOANG00000003778) PLXND1 (ENSOANG00000050054) IFT122 (ENSOANG00000010892) MBD4 (ENSOANG00000004589) ENSOANG00000028240 RPL32 (ENSOANG00000037596) ENSOANG00000040437 ENSOANG00000003781 SEC13 (ENSOANG00000009346) ENSOANG00000048399 PDZRN3 (ENSOANG00000042812) #17 ENSOANG00000036060 GXYLT2 (ENSOANG00000036924) #20 SHQ1 (ENSOANG00000013705) #21 ENSOANG00000011702 #22 ENSOANG00000012192 TWF2 (ENSOANG00000009135) PPM1M (ENSOANG00000004965) ALDH1L1 (ENSOANG00000022069) ENSOANG00000043021 KLF15 (ENSOANG00000014825) ENSOANG00000040843 ENSOANG00000029239 ENSOANG00000051327 UROC1 (ENSOANG00000031100) TMEM43 (ENSOANG00000002492) ENSOANG00000012272 ENSOANG00000012273 SLC6A6 (ENSOANG00000002131) GRIP2 (ENSOANG00000048579) Sauria ANCESTRAL SPECIES 13 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Lepidosauria ANCESTRAL SPECIES 14 ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Episquamata ANCESTRAL SPECIES 4 ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Laterata ANCESTRAL SPECIES 1 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Argentine black and white tegu MODERN SPECIES 30 CNTN4 (ENSSMRG00000017856) #13 ENSSMRG00000017841 CNTN6 (ENSSMRG00000013978) #14 CHL1 (ENSSMRG00000010197) #15 ENSSMRG00000010180 ENSSMRG00000010173 ENSSMRG00000010165 ENSSMRG00000010160 CNTN3 (ENSSMRG00000003298) #16 ENSSMRG00000003187 PDZRN3 (ENSSMRG00000003119) #17 ENSSMRG00000003079 GXYLT2 (ENSSMRG00000003071) #20 SHQ1 (ENSSMRG00000003041) #21 ENSSMRG00000002992 RYBP (ENSSMRG00000002983) #22 PROK2 (ENSSMRG00000002900) #23 GPR27 (ENSSMRG00000002896) EIF4E3 (ENSSMRG00000002895) #24 ENSSMRG00000002882 FOXP1 (ENSSMRG00000002823) #25 MDFIC2 (ENSSMRG00000002664) #26 MITF (ENSSMRG00000002637) #27 FRMD4B (ENSSMRG00000002580) #28 LMOD3 (ENSSMRG00000002566) #29 ARL6IP5 (ENSSMRG00000002565) #30 UBA3 (ENSSMRG00000002519) #31 TMF1 (ENSSMRG00000002507) #32 EOGT (ENSSMRG00000001044) #33 TAFA4 (ENSSMRG00000001030) #34 ENSSMRG00000000996 Common wall lizard MODERN SPECIES 10 LRRN1 (ENSPMRG00000014601) #9 CRBN (ENSPMRG00000014605) #10 TRNT1 (ENSPMRG00000014610) #11 ENSPMRG00000014615 CNTN4 (ENSPMRG00000014619) #13 CNTN6 (ENSPMRG00000014662) #14 ENSPMRG00000014808 CHL1 (ENSPMRG00000014819) #15 ENSPMRG00000014875 ENSPMRG00000014911 CNTN3 (ENSPMRG00000014964) #16 ENSPMRG00000015251 PDZRN3 (ENSPMRG00000015257) #17 ENSPMRG00000015274 SHQ1 (ENSPMRG00000015291) #21 RYBP (ENSPMRG00000015294) #22 PROK2 (ENSPMRG00000015300) #23 GPR27 (ENSPMRG00000015304) EIF4E3 (ENSPMRG00000015314) #24 FOXP1 (ENSPMRG00000015325) #25 MDFIC2 (ENSPMRG00000015336) #26 ENSPMRG00000015341 MITF (ENSPMRG00000015352) #27 ENSPMRG00000015381 FRMD4B (ENSPMRG00000015388) #28 LMOD3 (ENSPMRG00000015415) #29 ARL6IP5 (ENSPMRG00000015419) #30 UBA3 (ENSPMRG00000015448) #31 TMF1 (ENSPMRG00000015455) #32 EOGT (ENSPMRG00000015468) #33 TAFA4 (ENSPMRG00000015501) #34 Toxicofera ANCESTRAL SPECIES 3 ENSGT00940000155071.E ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000155071.E.m.a ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a.s #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Indian cobra MODERN SPECIES 1 SUMF1 (ENSNNAG00000002532) #7 ENSNNAG00000002521 #8 LRRN1 (ENSNNAG00000002516) #9 ENSNNAG00000002424 #10 TRNT1 (ENSNNAG00000002400) #11 CNTN4 (ENSNNAG00000002367) #13 CNTN6 (ENSNNAG00000002047) #14 CHL1 (ENSNNAG00000001897) #15 CNTN3 (ENSNNAG00000001838) #16 ENSNNAG00000001814 PDZRN3 (ENSNNAG00000001782) #17 ENSNNAG00000001768 GXYLT2 (ENSNNAG00000001742) #20 ENSNNAG00000001725 #21 ENSNNAG00000001713 #21 RYBP (ENSNNAG00000001699) #22 PROK2 (ENSNNAG00000001687) #23 GPR27 (ENSNNAG00000001680) EIF4E3 (ENSNNAG00000001669) #24 FOXP1 (ENSNNAG00000000627) #25 MDFIC2 (ENSNNAG00000000344) #26 MITF (ENSNNAG00000000297) #27 ENSNNAG00000000263 FRMD4B (ENSNNAG00000006495) #28 LMOD3 (ENSNNAG00000006462) #29 ARL6IP5 (ENSNNAG00000006448) #30 UBA3 (ENSNNAG00000006386) #31 TMF1 (ENSNNAG00000005900) #32 EOGT (ENSNNAG00000005800) #33 TAFA4 (ENSNNAG00000005772) #34 ENSNNAG00000005763 Elapidae_a ANCESTRAL SPECIES 8 ENSGT00940000155071.E.m.a ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a.s #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Acanthophiinae ANCESTRAL SPECIES 10 ENSGT00940000155071.E.m.a ENSGT01030000237821 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a.s #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 ENSGT00390000010170.a.a #36 Eastern brown snake MODERN SPECIES 3 ENSPTXG00000002883 ITPR1 (ENSPTXG00000000808) SUMF1 (ENSPTXG00000000467) #7 ENSPTXG00000000457 #8 LRRN1 (ENSPTXG00000000450) #9 CRBN (ENSPTXG00000000440) #10 TRNT1 (ENSPTXG00000000410) #11 CNTN4 (ENSPTXG00000000390) #13 ENSPTXG00000000362 #14 CHL1 (ENSPTXG00000000274) #15 CNTN3 (ENSPTXG00000000180) #16 PDZRN3 (ENSPTXG00000000135) #17 ENSPTXG00000000107 GXYLT2 (ENSPTXG00000000072) #20 SHQ1 (ENSPTXG00000000044) #21 RYBP (ENSPTXG00000004041) #22 PROK2 (ENSPTXG00000004037) #23 GPR27 (ENSPTXG00000004036) EIF4E3 (ENSPTXG00000004035) #24 FOXP1 (ENSPTXG00000002890) #25 MDFIC2 (ENSPTXG00000002874) #26 MITF (ENSPTXG00000002872) #27 FRMD4B (ENSPTXG00000002871) #28 LMOD3 (ENSPTXG00000002870) #29 ARL6IP5 (ENSPTXG00000002869) #30 UBA3 (ENSPTXG00000002868) #31 TMF1 (ENSPTXG00000002867) #32 EOGT (ENSPTXG00000002866) #33 TAFA4 (ENSPTXG00000002865) #34 ENSPTXG00000002864 SUCLG2 (ENSPTXG00000002863) #36 Mainland tiger snake MODERN SPECIES 2 ENSNSUG00000006524 #8 LRRN1 (ENSNSUG00000006527) #9 CRBN (ENSNSUG00000006528) #10 TRNT1 (ENSNSUG00000006530) #11 CNTN4 (ENSNSUG00000006531) #13 CNTN6 (ENSNSUG00000006539) #14 CHL1 (ENSNSUG00000006603) #15 ENSNSUG00000006605 CNTN3 (ENSNSUG00000006618) #16 ENSNSUG00000006988 PDZRN3 (ENSNSUG00000006989) #17 ENSNSUG00000006992 GXYLT2 (ENSNSUG00000006994) #20 ENSNSUG00000006998 #21 ENSNSUG00000006999 #21 RYBP (ENSNSUG00000007004) #22 PROK2 (ENSNSUG00000007007) #23 GPR27 (ENSNSUG00000007008) EIF4E3 (ENSNSUG00000007010) #24 FOXP1 (ENSNSUG00000007011) #25 MITF (ENSNSUG00000007126) #27 FRMD4B (ENSNSUG00000007211) #28 LMOD3 (ENSNSUG00000007212) #29 ARL6IP5 (ENSNSUG00000007213) #30 ENSNSUG00000007214 UBA3 (ENSNSUG00000007215) #31 TMF1 (ENSNSUG00000007216) #32 EOGT (ENSNSUG00000007219) #33 TAFA4 (ENSNSUG00000007226) #34 ENSNSUG00000007227 SUCLG2 (ENSNSUG00000007228) #36 Blue-lipped sea krait MODERN SPECIES 10156 ENSLLTG00000014962 #22 Lizard MODERN SPECIES 1 ENSACAG00000036977 CNTN6 (ENSACAG00000010425) #14 ENSACAG00000040802 ENSACAG00000041579 CHL1 (ENSACAG00000001405) #15 CNTN3 (ENSACAG00000014961) #16 ENSACAG00000043635 PDZRN3 (ENSACAG00000014911) #17 ENSACAG00000043132 PPP4R2 (ENSACAG00000014851) #18 GXYLT2 (ENSACAG00000014845) #20 SHQ1 (ENSACAG00000014809) #21 ENSACAG00000041376 ENSACAG00000040119 ENSACAG00000044810 RYBP (ENSACAG00000014789) #22 PROK2 (ENSACAG00000013932) #23 GPR27 (ENSACAG00000036221) EIF4E3 (ENSACAG00000035562) #24 ENSACAG00000045210 ENSACAG00000028536 ENSACAG00000042966 ENSACAG00000038806 ENSACAG00000042406 FOXP1 (ENSACAG00000013683) #25 ENSACAG00000043836 MDFIC2 (ENSACAG00000013680) #26 ENSACAG00000039576 ENSACAG00000041007 ENSACAG00000028935 MITF (ENSACAG00000036061) #27 tuatara MODERN SPECIES 276 PPP4R2 (ENSSPUG00000011494) #18 GXYLT2 (ENSSPUG00000011506) #20 ENSSPUG00000011522 #21 ENSSPUG00000011526 #21 RYBP (ENSSPUG00000011547) #22 PROK2 (ENSSPUG00000011555) #23 EIF4E3 (ENSSPUG00000011580) #24 FOXP1 (ENSSPUG00000011658) #25 Archelosauria ANCESTRAL SPECIES 17 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Cryptodira ANCESTRAL SPECIES 17 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00390000011238 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 Testudinoidea ANCESTRAL SPECIES 2 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Testudinidae ANCESTRAL SPECIES 5 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00650000094763 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 Abingdon island giant tortoise MODERN SPECIES 1926 CNTN3 (ENSCABG00000008269) #16 PDZRN3 (ENSCABG00000008275) #17 PPP4R2 (ENSCABG00000008278) #18 GXYLT2 (ENSCABG00000008279) #20 ENSCABG00000008280 #21 ENSCABG00000008281 #21 RYBP (ENSCABG00000008286) #22 PROK2 (ENSCABG00000008289) #23 GPR27 (ENSCABG00000008291) EIF4E3 (ENSCABG00000008293) #24 ENSCABG00000008296 Goode s thornscrub tortoise MODERN SPECIES 21 LRRN1 (ENSGEVG00005017431) #9 CRBN (ENSGEVG00005017441) #10 TRNT1 (ENSGEVG00005017461) #11 ENSGEVG00005017472 IL5RA (ENSGEVG00005017497) #12 CNTN4 (ENSGEVG00005017523) #13 ENSGEVG00005017608 CNTN6 (ENSGEVG00005017681) #14 CHL1 (ENSGEVG00005018075) #15 CNTN3 (ENSGEVG00005018336) #16 ENSGEVG00005018629 PDZRN3 (ENSGEVG00005018672) #17 PPP4R2 (ENSGEVG00005018720) #18 GXYLT2 (ENSGEVG00005018737) #20 SHQ1 (ENSGEVG00005018751) #21 RYBP (ENSGEVG00005018775) #22 PROK2 (ENSGEVG00005018790) #23 GPR27 (ENSGEVG00005018807) EIF4E3 (ENSGEVG00005018821) #24 ENSGEVG00005018834 FOXP1 (ENSGEVG00005018847) #25 MDFIC2 (ENSGEVG00005018869) #26 ENSGEVG00005018889 MITF (ENSGEVG00005018917) #27 FRMD4B (ENSGEVG00005018987) #28 LMOD3 (ENSGEVG00005019002) #29 ARL6IP5 (ENSGEVG00005019026) #30 UBA3 (ENSGEVG00005004001) #31 TMF1 (ENSGEVG00005004020) #32 EOGT (ENSGEVG00005004061) #33 TAFA4 (ENSGEVG00005004105) #34 Emydidae ANCESTRAL SPECIES 13 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Three-toed box turtle MODERN SPECIES 33 ENSTMTG00000018826 #8 SUMF1 (ENSTMTG00000018795) #7 LRRN1 (ENSTMTG00000018782) #9 CRBN (ENSTMTG00000018758) #10 TRNT1 (ENSTMTG00000018738) #11 IL5RA (ENSTMTG00000018639) #12 CNTN4 (ENSTMTG00000018539) #13 CNTN6 (ENSTMTG00000018470) #14 ENSTMTG00000018456 CHL1 (ENSTMTG00000018260) #15 CNTN3 (ENSTMTG00000018117) #16 PDZRN3 (ENSTMTG00000018055) #17 PPP4R2 (ENSTMTG00000018024) #18 GXYLT2 (ENSTMTG00000018007) #20 SHQ1 (ENSTMTG00000017994) #21 RYBP (ENSTMTG00000017980) #22 PROK2 (ENSTMTG00000017933) #23 GPR27 (ENSTMTG00000017910) EIF4E3 (ENSTMTG00000017896) #24 FOXP1 (ENSTMTG00000017846) #25 MDFIC2 (ENSTMTG00000017833) #26 ENSTMTG00000017820 ENSTMTG00000017806 MITF (ENSTMTG00000017748) #27 FRMD4B (ENSTMTG00000017669) #28 LMOD3 (ENSTMTG00000017636) #29 ENSTMTG00000017624 ARL6IP5 (ENSTMTG00000017618) #30 UBA3 (ENSTMTG00000017592) #31 TMF1 (ENSTMTG00000017529) #32 EOGT (ENSTMTG00000017077) #33 painted turtle MODERN SPECIES 2383 PDZRN3 (ENSCPBG00000006475) #17 PPP4R2 (ENSCPBG00000006460) #18 GXYLT2 (ENSCPBG00000006448) #20 SHQ1 (ENSCPBG00000006441) #21 RYBP (ENSCPBG00000006439) #22 PROK2 (ENSCPBG00000006431) #23 GPR27 (ENSCPBG00000006421) EIF4E3 (ENSCPBG00000006415) #24 ENSCPBG00000005362 C3orf80 (ENSCPBG00000005344) FOXP1 (ENSCPBG00000000850) #25 MDFIC2 (ENSCPBG00000000641) #26 ENSCPBG00000000607 ENSCPBG00000000573 MITF (ENSCPBG00000000513) #27 FRMD4B (ENSCPBG00000000426) #28 LMOD3 (ENSCPBG00000000394) #29 ARL6IP5 (ENSCPBG00000000384) #30 UBA3 (ENSCPBG00000000357) #31 TMF1 (ENSCPBG00000000268) #32 Chinese turtle MODERN SPECIES 1091 RYBP (ENSPSIG00000011534) #22 PROK2 (ENSPSIG00000011546) #23 Archosauria ANCESTRAL SPECIES 24 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Aves ANCESTRAL SPECIES 29 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Neognathae ANCESTRAL SPECIES 27 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Neognathae_b ANCESTRAL SPECIES 18 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Passeriformes ANCESTRAL SPECIES 16 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Passeriformes_d ANCESTRAL SPECIES 16 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Passeriformes_g ANCESTRAL SPECIES 16 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C.k #13 ENSGT00940000155198.C.l #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Passeroidea ANCESTRAL SPECIES 16 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C.k #13 ENSGT00940000155198.C.l #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Zebra finch MODERN SPECIES 3 BHLHE40 (ENSTGUG00000010301) ITPR1 (ENSTGUG00000010241) SUMF1 (ENSTGUG00000010221) #7 ENSTGUG00000019447 #8 LRRN1 (ENSTGUG00000010215) #9 CRBN (ENSTGUG00000010200) #10 TRNT1 (ENSTGUG00000010192) #11 IL5RA (ENSTGUG00000010171) #12 CNTN4 (ENSTGUG00000010102) #13 CNTN6 (ENSTGUG00000010053) #14 CHL1 (ENSTGUG00000009997) #15 CNTN3 (ENSTGUG00000009960) #16 PDZRN3 (ENSTGUG00000014523) #17 ENSTGUG00000009943 SHQ1 (ENSTGUG00000009933) #21 RYBP (ENSTGUG00000020831) #22 PROK2 (ENSTGUG00000026872) #23 GPR27 (ENSTGUG00000009928) EIF4E3 (ENSTGUG00000009923) #24 FOXP1 (ENSTGUG00000009872) #25 MDFIC2 (ENSTGUG00000022276) #26 ENSTGUG00000009864 MITF (ENSTGUG00000009847) #27 FRMD4B (ENSTGUG00000009791) #28 LMOD3 (ENSTGUG00000009788) #29 ARL6IP5 (ENSTGUG00000009784) #30 UBA3 (ENSTGUG00000009733) #31 TMF1 (ENSTGUG00000009717) #32 EOGT (ENSTGUG00000009683) #33 TAFA4 (ENSTGUG00000024581) #34 TAFA1 (ENSTGUG00000009669) #35 Common canary MODERN SPECIES 15 CHL1 (ENSSCAG00000008249) #15 CNTN3 (ENSSCAG00000008226) #16 PDZRN3 (ENSSCAG00000008162) #17 PPP4R2 (ENSSCAG00000008132) #18 GXYLT2 (ENSSCAG00000008125) #20 SHQ1 (ENSSCAG00000008114) #21 RYBP (ENSSCAG00000008108) #22 PROK2 (ENSSCAG00000008100) #23 GPR27 (ENSSCAG00000008093) EIF4E3 (ENSSCAG00000008083) #24 FOXP1 (ENSSCAG00000008063) #25 MDFIC2 (ENSSCAG00000008028) #26 ENSSCAG00000008022 ENSSCAG00000008018 MITF (ENSSCAG00000008001) #27 FRMD4B (ENSSCAG00000007970) #28 LMOD3 (ENSSCAG00000007965) #29 ARL6IP5 (ENSSCAG00000007962) #30 UBA3 (ENSSCAG00000007959) #31 TMF1 (ENSSCAG00000007954) #32 EOGT (ENSSCAG00000007882) #33 TAFA4 (ENSSCAG00000007848) #34 Medium ground finch MODERN SPECIES 20 CHL1 (ENSGFOG00000004348) #15 CNTN3 (ENSGFOG00000004387) #16 PDZRN3 (ENSGFOG00000004417) #17 PPP4R2 (ENSGFOG00000004433) #18 GXYLT2 (ENSGFOG00000004458) #20 SHQ1 (ENSGFOG00000004475) #21 RYBP (ENSGFOG00000004492) #22 ENSGFOG00000004504 PROK2 (ENSGFOG00000004519) #23 GPR27 (ENSGFOG00000004530) EIF4E3 (ENSGFOG00000004543) #24 FOXP1 (ENSGFOG00000004570) #25 MDFIC2 (ENSGFOG00000004631) #26 ENSGFOG00000004645 ENSGFOG00000004688 MITF (ENSGFOG00000004714) #27 FRMD4B (ENSGFOG00000004734) #28 LMOD3 (ENSGFOG00000004784) #29 ARL6IP5 (ENSGFOG00000004791) #30 UBA3 (ENSGFOG00000004801) #31 TMF1 (ENSGFOG00000004844) #32 EOGT (ENSGFOG00000005298) #33 Flycatcher MODERN SPECIES 3 ENSFALG00000023036 #8 LRRN1 (ENSFALG00000014525) #9 CRBN (ENSFALG00000013540) #10 TRNT1 (ENSFALG00000013539) #11 IL5RA (ENSFALG00000013534) #12 ENSFALG00000025220 CNTN4 (ENSFALG00000013504) #13 CNTN6 (ENSFALG00000013472) #14 CHL1 (ENSFALG00000013463) #15 CNTN3 (ENSFALG00000013457) #16 ENSFALG00000027072 PDZRN3 (ENSFALG00000013445) #17 PPP4R2 (ENSFALG00000013436) #18 GXYLT2 (ENSFALG00000024120) #20 SHQ1 (ENSFALG00000013428) #21 RYBP (ENSFALG00000027888) #22 PROK2 (ENSFALG00000013423) #23 GPR27 (ENSFALG00000014506) EIF4E3 (ENSFALG00000028480) #24 FOXP1 (ENSFALG00000013404) #25 MDFIC2 (ENSFALG00000013397) #26 ENSFALG00000013396 MITF (ENSFALG00000026731) #27 FRMD4B (ENSFALG00000013372) #28 LMOD3 (ENSFALG00000013370) #29 ARL6IP5 (ENSFALG00000028538) #30 UBA3 (ENSFALG00000013365) #31 TMF1 (ENSFALG00000013361) #32 EOGT (ENSFALG00000026269) #33 TAFA4 (ENSFALG00000013356) #34 TAFA1 (ENSFALG00000013355) #35 Great tit MODERN SPECIES 3 ITPR1 (ENSPMJG00000005801) SUMF1 (ENSPMJG00000005794) #7 ENSPMJG00000005792 #8 CRBN (ENSPMJG00000005773) #10 TRNT1 (ENSPMJG00000005765) #11 IL5RA (ENSPMJG00000005764) #12 CNTN4 (ENSPMJG00000005757) #13 CNTN6 (ENSPMJG00000005736) #14 CHL1 (ENSPMJG00000005688) #15 CNTN3 (ENSPMJG00000005671) #16 ENSPMJG00000005665 PDZRN3 (ENSPMJG00000005657) #17 ENSPMJG00000005654 GXYLT2 (ENSPMJG00000005617) #20 SHQ1 (ENSPMJG00000005611) #21 RYBP (ENSPMJG00000005603) #22 PROK2 (ENSPMJG00000005599) #23 GPR27 (ENSPMJG00000005597) EIF4E3 (ENSPMJG00000005596) #24 FOXP1 (ENSPMJG00000005573) #25 MDFIC2 (ENSPMJG00000005566) #26 ENSPMJG00000005560 MITF (ENSPMJG00000005557) #27 FRMD4B (ENSPMJG00000005549) #28 LMOD3 (ENSPMJG00000005547) #29 ARL6IP5 (ENSPMJG00000005544) #30 UBA3 (ENSPMJG00000005263) #31 TMF1 (ENSPMJG00000005253) #32 EOGT (ENSPMJG00000005244) #33 TAFA4 (ENSPMJG00000005234) #34 TAFA1 (ENSPMJG00000005221) #35 Neognathae_c ANCESTRAL SPECIES 21 ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 ENSGT00390000010170.a.a #36 Kakapo MODERN SPECIES 3 SUMF1 (ENSSHBG00005021231) #7 ENSSHBG00005021232 #8 LRRN1 (ENSSHBG00005021234) #9 CRBN (ENSSHBG00005021235) #10 TRNT1 (ENSSHBG00005021236) #11 IL5RA (ENSSHBG00005021237) #12 CNTN4 (ENSSHBG00005021238) #13 CNTN6 (ENSSHBG00005021239) #14 CHL1 (ENSSHBG00005021241) #15 CNTN3 (ENSSHBG00005000965) #16 ENSSHBG00005010579 PDZRN3 (ENSSHBG00005010639) #17 ENSSHBG00005010670 GXYLT2 (ENSSHBG00005010727) #20 SHQ1 (ENSSHBG00005010752) #21 RYBP (ENSSHBG00005010792) #22 PROK2 (ENSSHBG00005010813) #23 GPR27 (ENSSHBG00005010828) EIF4E3 (ENSSHBG00005010834) #24 FOXP1 (ENSSHBG00005010885) #25 MDFIC2 (ENSSHBG00005010924) #26 ENSSHBG00005010965 ENSSHBG00005010991 ENSSHBG00005011012 FRMD4B (ENSSHBG00005011065) #28 LMOD3 (ENSSHBG00005011123) #29 ARL6IP5 (ENSSHBG00005011174) #30 UBA3 (ENSSHBG00005011214) #31 TMF1 (ENSSHBG00005011258) #32 EOGT (ENSSHBG00005011329) #33 TAFA4 (ENSSHBG00005011455) #34 Golden eagle MODERN SPECIES 12 ENSACCG00020009779 #8 LRRN1 (ENSACCG00020009768) #9 ENSACCG00020009755 CRBN (ENSACCG00020009742) #10 TRNT1 (ENSACCG00020009728) #11 IL5RA (ENSACCG00020009685) #12 ENSACCG00020009645 CNTN4 (ENSACCG00020009634) #13 CNTN6 (ENSACCG00020009592) #14 CHL1 (ENSACCG00020009287) #15 CNTN3 (ENSACCG00020008678) #16 PDZRN3 (ENSACCG00020008644) #17 PPP4R2 (ENSACCG00020008614) #18 GXYLT2 (ENSACCG00020008596) #20 SHQ1 (ENSACCG00020008571) #21 RYBP (ENSACCG00020008553) #22 PROK2 (ENSACCG00020008544) #23 GPR27 (ENSACCG00020008536) EIF4E3 (ENSACCG00020008519) #24 FOXP1 (ENSACCG00020008422) #25 MDFIC2 (ENSACCG00020008280) #26 MITF (ENSACCG00020008257) #27 FRMD4B (ENSACCG00020008222) #28 LMOD3 (ENSACCG00020008206) #29 ARL6IP5 (ENSACCG00020008195) #30 UBA3 (ENSACCG00020008140) #31 TMF1 (ENSACCG00020008119) #32 EOGT (ENSACCG00020008102) #33 TAFA4 (ENSACCG00020008089) #34 TAFA1 (ENSACCG00020008077) #35 SUCLG2 (ENSACCG00020008064) #36 Galloanserae ANCESTRAL SPECIES 26 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Anatidae ANCESTRAL SPECIES 41 ENSGT00940000155071.E ENSGT00390000008983.a #7 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Pink-footed goose MODERN SPECIES 49 ITPR1 (ENSABRG00000010195) SUMF1 (ENSABRG00000014365) #7 ENSABRG00000014367 #8 LRRN1 (ENSABRG00000014369) #9 CRBN (ENSABRG00000014371) #10 TRNT1 (ENSABRG00000014416) #11 IL5RA (ENSABRG00000014471) #12 CNTN4 (ENSABRG00000014569) #13 CNTN6 (ENSABRG00000015653) #14 CHL1 (ENSABRG00000016703) #15 CNTN3 (ENSABRG00000016737) #16 PDZRN3 (ENSABRG00000016746) #17 PPP4R2 (ENSABRG00000016753) #18 GXYLT2 (ENSABRG00000016756) #20 SHQ1 (ENSABRG00000016761) #21 RYBP (ENSABRG00000016768) #22 PROK2 (ENSABRG00000016781) #23 GPR27 (ENSABRG00000016783) EIF4E3 (ENSABRG00000016790) #24 FOXP1 (ENSABRG00000016798) #25 MDFIC2 (ENSABRG00000016818) #26 ENSABRG00000016826 MITF (ENSABRG00000016841) #27 FRMD4B (ENSABRG00000016861) #28 LMOD3 (ENSABRG00000016894) #29 ARL6IP5 (ENSABRG00000016899) #30 UBA3 (ENSABRG00000016957) #31 TMF1 (ENSABRG00000017367) #32 EOGT (ENSABRG00000017437) #33 TAFA4 (ENSABRG00000017510) #34 ENSABRG00000017534 Duck MODERN SPECIES 4 ITPR1 (ENSAPLG00000016350) SUMF1 (ENSAPLG00000003538) #7 ENSAPLG00000001691 #8 LRRN1 (ENSAPLG00000001694) #9 CRBN (ENSAPLG00000003897) #10 TRNT1 (ENSAPLG00000004258) #11 IL5RA (ENSAPLG00000004282) #12 CNTN4 (ENSAPLG00000004320) #13 CNTN6 (ENSAPLG00000005639) #14 CHL1 (ENSAPLG00000007000) #15 CNTN3 (ENSAPLG00000009693) #16 PDZRN3 (ENSAPLG00000014073) #17 PPP4R2 (ENSAPLG00000014045) #18 GXYLT2 (ENSAPLG00000013945) #20 SHQ1 (ENSAPLG00000013926) #21 RYBP (ENSAPLG00000013882) #22 PROK2 (ENSAPLG00000011432) #23 GPR27 (ENSAPLG00000011697) EIF4E3 (ENSAPLG00000023114) #24 FOXP1 (ENSAPLG00000011828) #25 MDFIC2 (ENSAPLG00000023736) #26 ENSAPLG00000011893 MITF (ENSAPLG00000011965) #27 FRMD4B (ENSAPLG00000012468) #28 LMOD3 (ENSAPLG00000013202) #29 ARL6IP5 (ENSAPLG00000017744) #30 UBA3 (ENSAPLG00000013254) #31 TMF1 (ENSAPLG00000013459) #32 EOGT (ENSAPLG00000013712) #33 TAFA4 (ENSAPLG00000014143) #34 ENSAPLG00000014295 Phasianidae ANCESTRAL SPECIES 16 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000163880 Phasianidae_b ANCESTRAL SPECIES 16 ENSGT00940000162663 #8 ENSGT00940000157154.d #9 ENSGT00390000016404 #10 ENSGT00390000009678 #11 ENSGT00940000160890 #12 ENSGT00940000155198.C #13 ENSGT00940000160606 #14 ENSGT00940000160080 #15 ENSGT00940000160282 #16 ENSGT00530000063647.A.a.d ENSGT00940000165570 ENSGT00950000183062.a.a.a #17 ENSGT00940000160975 #18 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000162026 #23 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Chicken MODERN SPECIES 3 SUMF1 (ENSGALG00010020596) #7 ENSGALG00010020580 #8 LRRN1 (ENSGALG00010020562) #9 CRBN (ENSGALG00010020509) #10 TRNT1 (ENSGALG00010020484) #11 IL5RA (ENSGALG00010020457) #12 CNTN4 (ENSGALG00010020436) #13 CNTN6 (ENSGALG00010020425) #14 CHL1 (ENSGALG00010020396) #15 CNTN3 (ENSGALG00010020369) #16 ENSGALG00010020359 PDZRN3 (ENSGALG00010020350) #17 PPP4R2 (ENSGALG00010020329) #18 GXYLT2 (ENSGALG00010020309) #20 SHQ1 (ENSGALG00010020307) #21 RYBP (ENSGALG00010018991) #22 PROK2 (ENSGALG00010019225) #23 GPR173 (ENSGALG00010022232) EIF4E3 (ENSGALG00010022219) #24 FOXP1 (ENSGALG00010022171) #25 MDFIC2 (ENSGALG00010022083) #26 ENSGALG00010022077 MITF (ENSGALG00010022062) #27 FRMD4B (ENSGALG00010020127) #28 LMOD3 (ENSGALG00010020088) #29 ARL6IP5 (ENSGALG00010020070) #30 UBA3 (ENSGALG00010020061) #31 TMF1 (ENSGALG00010020036) #32 EOGT (ENSGALG00010020005) #33 TAFA4 (ENSGALG00010019938) #34 TAFA1 (ENSGALG00010019871) #35 Turkey MODERN SPECIES 5 LRRN1 (ENSMGAG00000009988) #9 TRNT1 (ENSMGAG00000009971) #11 CRBN (ENSMGAG00000010013) #10 IL5RA (ENSMGAG00000009996) #12 CNTN4 (ENSMGAG00000009910) #13 CNTN6 (ENSMGAG00000009812) #14 CHL1 (ENSMGAG00000009762) #15 ENSMGAG00000009709 #16 ENSMGAG00000021720 ENSMGAG00000017393 PDZRN3 (ENSMGAG00000009691) #17 ENSMGAG00000018290 GXYLT2 (ENSMGAG00000009655) #20 PPP4R2 (ENSMGAG00000009674) #18 SHQ1 (ENSMGAG00000009640) #21 RYBP (ENSMGAG00000009639) #22 PROK2 (ENSMGAG00000002367) #23 GPR27 (ENSMGAG00000009633) EIF4E3 (ENSMGAG00000009619) #24 FOXP1 (ENSMGAG00000009549) #25 MDFIC2 (ENSMGAG00000009545) #26 ENSMGAG00000009539 MITF (ENSMGAG00000009507) #27 FRMD4B (ENSMGAG00000009466) #28 LMOD3 (ENSMGAG00000009459) #29 ARL6IP5 (ENSMGAG00000009453) #30 UBA3 (ENSMGAG00000009393) #31 TMF1 (ENSMGAG00000009372) #32 EOGT (ENSMGAG00000009335) #33 TAFA4 (ENSMGAG00000009332) #34 ENSMGAG00000009329 Japanese quail MODERN SPECIES 3 ENSCJPG00005018684 #8 LRRN1 (ENSCJPG00005018683) #9 CRBN (ENSCJPG00005018682) #10 TRNT1 (ENSCJPG00005018681) #11 IL5RA (ENSCJPG00005018680) #12 CNTN4 (ENSCJPG00005018679) #13 CNTN6 (ENSCJPG00005018676) #14 ENSCJPG00005018675 ENSCJPG00005018674 CHL1 (ENSCJPG00005018669) #15 CNTN3 (ENSCJPG00005018668) #16 PDZRN3 (ENSCJPG00005018664) #17 ENSCJPG00005018662 GXYLT2 (ENSCJPG00005018661) #20 SHQ1 (ENSCJPG00005018660) #21 RYBP (ENSCJPG00005018659) #22 PROK2 (ENSCJPG00005018655) #23 GPR27 (ENSCJPG00005018654) ENSCJPG00005018653 EIF4E3 (ENSCJPG00005018652) #24 FOXP1 (ENSCJPG00005018169) #25 MDFIC2 (ENSCJPG00005018163) #26 ENSCJPG00005018162 ENSCJPG00005018160 MITF (ENSCJPG00005018152) #27 FRMD4B (ENSCJPG00005018142) #28 LMOD3 (ENSCJPG00005018140) #29 ARL6IP5 (ENSCJPG00005018138) #30 UBA3 (ENSCJPG00005018109) #31 TMF1 (ENSCJPG00005018103) #32 EOGT (ENSCJPG00005018101) #33 African ostrich MODERN SPECIES 1076 ENSSCUG00000015304 #8 LRRN1 (ENSSCUG00000015306) #9 CRBN (ENSSCUG00000015318) #10 TRNT1 (ENSSCUG00000015323) #11 IL5RA (ENSSCUG00000015330) #12 CNTN4 (ENSSCUG00000015339) #13 ENSSCUG00000015349 CNTN6 (ENSSCUG00000015354) #14 CHL1 (ENSSCUG00000015369) #15 CNTN3 (ENSSCUG00000015390) #16 ENSSCUG00000015400 PDZRN3 (ENSSCUG00000015402) #17 PPP4R2 (ENSSCUG00000015403) #18 GXYLT2 (ENSSCUG00000015407) #20 SHQ1 (ENSSCUG00000015411) #21 RYBP (ENSSCUG00000015421) #22 PROK2 (ENSSCUG00000015422) #23 GPR27 (ENSSCUG00000015423) EIF4E3 (ENSSCUG00000015426) #24 Australian saltwater crocodile MODERN SPECIES 37 LRRN1 (ENSCPRG00005015420) #9 CRBN (ENSCPRG00005015422) #10 TRNT1 (ENSCPRG00005015429) #11 IL5RA (ENSCPRG00005015437) #12 CNTN4 (ENSCPRG00005015455) #13 ENSCPRG00005015468 ENSCPRG00005015470 CNTN6 (ENSCPRG00005015511) #14 CHL1 (ENSCPRG00005015694) #15 ENSCPRG00005015700 CNTN3 (ENSCPRG00005015706) #16 PDZRN3 (ENSCPRG00005015721) #17 PPP4R2 (ENSCPRG00005015732) #18 GXYLT2 (ENSCPRG00005015736) #20 ENSCPRG00005015737 #21 RYBP (ENSCPRG00005015740) #22 PROK2 (ENSCPRG00005015745) #23 GPR27 (ENSCPRG00005015748) EIF4E3 (ENSCPRG00005015751) #24 FOXP1 (ENSCPRG00005015769) #25 MDFIC2 (ENSCPRG00005015832) #26 MITF (ENSCPRG00005015838) #27 FRMD4B (ENSCPRG00005015846) #28 LMOD3 (ENSCPRG00005015864) #29 ARL6IP5 (ENSCPRG00005015865) #30 UBA3 (ENSCPRG00005015868) #31 TMF1 (ENSCPRG00005015874) #32 EOGT (ENSCPRG00005015876) #33 TAFA4 (ENSCPRG00005015878) #34 ENSCPRG00005015882 ENSCPRG00005015885 Anura ANCESTRAL SPECIES 52 ENSGT00950000183062.a.a.a #17 ENSGT00940000162859 ENSGT00940000158065 #20 ENSGT00390000007605 #21 ENSGT00390000013995.b.a #22 ENSGT00940000167138 ENSGT00890000139436.A.a ENSGT00940000155865 #24 ENSGT00940000159892 #25 ENSGT00730000111641 #26 ENSGT00940000165309 ENSGT00940000156326 #27 ENSGT01020000230354.A.a #28 ENSGT00940000159731 #29 ENSGT00390000008631.a #30 ENSGT00550000074831 #31 ENSGT00390000010697 #32 ENSGT00940000156493 #33 ENSGT00940000159882 #34 ENSGT00940000162607 #35 Leishan spiny toad MODERN SPECIES 11 ENSLLEG00000030114 TAFA4 (ENSLLEG00000030074) #34 EOGT (ENSLLEG00000030010) #33 ENSLLEG00000029988 TMF1 (ENSLLEG00000029962) #32 UBA3 (ENSLLEG00000029864) #31 ENSLLEG00000029831 ENSLLEG00000029807 ENSLLEG00000029794 ENSLLEG00000029787 PDZRN3 (ENSLLEG00000029758) #17 ENSLLEG00000029725 GXYLT2 (ENSLLEG00000029705) #20 SHQ1 (ENSLLEG00000029669) #21 ENSLLEG00000029657 RYBP (ENSLLEG00000029604) #22 ENSLLEG00000029590 EIF4E3 (ENSLLEG00000029555) #24 ENSLLEG00000029545 FOXP1 (ENSLLEG00000029038) #25 MDFIC2 (ENSLLEG00000028932) #26 SLC25A6 (ENSLLEG00000028913) ENSLLEG00000028726 ENSLLEG00000028682 ENSLLEG00000028673 IVNS1ABP (ENSLLEG00000028612) GLRX2 (ENSLLEG00000028565) CDC73 (ENSLLEG00000028448) ENSLLEG00000028405 MITF (ENSLLEG00000028151) #27 ENSLLEG00000028107 Frog MODERN SPECIES 4 setd5 (ENSXETG00000017841) ENSXETG00000035213 XB5772073 [provisional:srpk1] (ENSXETG00000024935) ENSXETG00000041322 plxnb1 (ENSXETG00000017823) XB956263 [provisional:mapk12] (ENSXETG00000000409) ccdc51 (ENSXETG00000047356) ccdc51 (ENSXETG00000044242) ENSXETG00000000408 ENSXETG00000038876 pdzrn3 (ENSXETG00000000401) #17 ppp4r2 (ENSXETG00000015932) gxylt2 (ENSXETG00000015929) #20 shq1 (ENSXETG00000032215) #21 ENSXETG00000039956 rybp (ENSXETG00000015914) #22 prok2 (ENSXETG00000035599) gpr27 (ENSXETG00000031117) eif4e3 (ENSXETG00000046627) #24 foxp1 (ENSXETG00000008510) #25 ENSXETG00000043474 ENSXETG00000044720 MDFIC2 (ENSXETG00000044995) #26 mgc147226 (ENSXETG00000000147) mitf (ENSXETG00000039276) #27 frmd4b (ENSXETG00000016169) #28 lmod3 (ENSXETG00000043756) #29 arl6ip5 (ENSXETG00000036732) #30 ENSXETG00000040721 ENSXETG00000040947 uba3 (ENSXETG00000016167) #31 Coelacanth MODERN SPECIES 712 CNTN3 (ENSLACG00000003784) #16 ENSLACG00000010516 PDZRN3 (ENSLACG00000012887) #17 ppp4r2b (ENSLACG00000013646) GXYLT2 (ENSLACG00000014093) #20 SHQ1 (ENSLACG00000014243) #21 RYBP (ENSLACG00000015328) #22