Chordata	ANCESTRAL SPECIES																	ENSGT00520000055635 #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00520000055635 #22
Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b #22
Euteleostomi	ANCESTRAL SPECIES	634												ENSGT00940000163576	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22
Sarcopterygii	ANCESTRAL SPECIES	4	ENSGT00940000159450	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902	ENSGT00390000012030.b.a	ENSGT00390000012178	ENSGT00940000159568	ENSGT00940000163576	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00390000008820.f	ENSGT00940000159055	ENSGT01060000248594.e.a
Tetrapoda	ANCESTRAL SPECIES	20	ENSGT00940000159450	ENSGT00940000155753	ENSGT00940000159746	ENSGT00940000156281	ENSGT01020000230412.D	ENSGT00940000158214	ENSGT00940000160087	ENSGT00940000155902	ENSGT00390000012030.b.a	ENSGT00390000012178	ENSGT00940000159568	ENSGT00940000163576	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00390000008820.f	ENSGT00940000159055	ENSGT01060000248594.e.a	ENSGT00940000159922.b	ENSGT00510000047493	ENSGT00950000183232	ENSGT00940000161570	ENSGT00940000156128.b
Amniota	ANCESTRAL SPECIES	107													ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A
Mammalia	ANCESTRAL SPECIES	95						ENSGT01100000263479.A ##13	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00960000189159	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00530000063351	ENSGT00940000153599.B.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000162551
Theria	ANCESTRAL SPECIES	27						ENSGT01100000263479.A ##13	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00960000189159	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a	ENSGT00530000063351.b	ENSGT00940000153599.B.a
Eutheria	ANCESTRAL SPECIES	29				ENSGT00530000063351.a.a	ENSGT01100000263479.D.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.b	ENSGT00940000153599.B.a
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a #13	ENSGT00530000063351.a.a
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.d ##13	ENSGT01100000263479.F ##13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b ##13	ENSGT01100000263479.H ##13
Primates	ANCESTRAL SPECIES	15	ENSGT00390000004140.a	ENSGT00940000162551	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a #13	ENSGT00530000063351.a.a
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00390000004140.a	ENSGT00940000162551	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a #13	ENSGT00530000063351.a.a
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a #14	ENSGT01100000263479.D.a.c.a.a.b ##13
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.c ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a #14	ENSGT01100000263479.D.a.c.a.a.b ##13
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ##13
Rhinopithecus	ANCESTRAL SPECIES	7					ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.w #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ##13	ENSGT01100000263479.H ##13
Black snub-nosed monkey	MODERN SPECIES	1480						ENSRBIG00000038958 #12	CEACAM8 (ENSRBIG00000036569) #13	ENSRBIG00000029372 #14	CXCL17 (ENSRBIG00000034024) #15	LIPE (ENSRBIG00000026032) #16	MEGF8 (ENSRBIG00000030430) #17	TMEM145 (ENSRBIG00000027953) #18	ENSRBIG00000036695 #19	CIC (ENSRBIG00000037882) #20	ERF (ENSRBIG00000044831) #21	GSK3A (ENSRBIG00000026755) #22	DEDD2 (ENSRBIG00000036819) #23	POU2F2 (ENSRBIG00000033424) #24	ENSRBIG00000002228 #25	ZNF574 (ENSRBIG00000039444) #26	GRIK5 (ENSRBIG00000039241) #27	ATP1A3 (ENSRBIG00000040005) #28	RABAC1 (ENSRBIG00000043920) #29	ERFL (ENSRBIG00000027943) #30	ARHGEF1 (ENSRBIG00000037210) #31	OLFM3 (ENSRBIG00000035890) #32
Golden snub-nosed monkey	MODERN SPECIES	826					CEACAM8 (ENSRROG00000030909) #13	ENSRROG00000031807 #14	CXCL17 (ENSRROG00000032330) #15	LIPE (ENSRROG00000031425) #16	CNFN (ENSRROG00000034326)	MEGF8 (ENSRROG00000029639) #17	TMEM145 (ENSRROG00000030044) #18	PRR19 (ENSRROG00000045744)	PAFAH1B3 (ENSRROG00000039439) #19	CIC (ENSRROG00000031194) #20	ERF (ENSRROG00000030775) #21	GSK3A (ENSRROG00000018920) #22	DEDD2 (ENSRROG00000036764) #23	POU2F2 (ENSRROG00000039207) #24	ENSRROG00000043003 #25	ZNF574 (ENSRROG00000039347) #26	GRIK5 (ENSRROG00000023216) #27	ATP1A3 (ENSRROG00000030951) #28	RABAC1 (ENSRROG00000038065) #29
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ##13
Vervet Monkey	MODERN SPECIES	25	ENSCSAG00000003408	LYPD3 (ENSCSAG00000003412)	TEX101 (ENSCSAG00000003415)	CD177 (ENSCSAG00000003420)	CEACAM8 (ENSCSAG00000003425) #13	ENSCSAG00000003432 #14	CXCL17 (ENSCSAG00000003434) #15	LIPE (ENSCSAG00000003440) #16	CNFN (ENSCSAG00000003441)	MEGF8 (ENSCSAG00000003447) #17	TMEM145 (ENSCSAG00000003454) #18	PRR19 (ENSCSAG00000003457)	PAFAH1B3 (ENSCSAG00000003459) #19	ENSCSAG00000003462 #20	ERF (ENSCSAG00000003467) #21	GSK3A (ENSCSAG00000003471) #22	ZNF526 (ENSCSAG00000019619)	DEDD2 (ENSCSAG00000003475) #23	POU2F2 (ENSCSAG00000003479) #24	ZNF574 (ENSCSAG00000019618) #26	GRIK5 (ENSCSAG00000003483) #27	ATP1A3 (ENSCSAG00000003487) #28	RABAC1 (ENSCSAG00000003491) #29	ARHGEF1 (ENSCSAG00000003495) #31	CD79A (ENSCSAG00000003499)	RPS19 (ENSCSAG00000003501)	DMRTC2 (ENSCSAG00000003507)	ENSCSAG00000003511	ENSCSAG00000003513 ##13	ENSCSAG00000003514 ##13	CEACAM7 (ENSCSAG00000003517) ##13
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.c.a.b.b.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.b.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00510000048142.i.b	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00390000013102.e.b	ENSGT00940000161904
Macaca	ANCESTRAL SPECIES	12	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.b.b ##13	ENSGT01100000263479.D.a.c.a.b.c.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.z #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00510000048142.i.b	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b
Pig-tailed macaque	MODERN SPECIES	218			ENSMNEG00000028622	ENSMNEG00000034629 ##13	CEACAM8 (ENSMNEG00000040447) #13	ENSMNEG00000043260 #14	CXCL17 (ENSMNEG00000034675) #15	LIPE (ENSMNEG00000040343) #16	CNFN (ENSMNEG00000033488)	MEGF8 (ENSMNEG00000029250) #17	TMEM145 (ENSMNEG00000035718) #18	PRR19 (ENSMNEG00000036706)	PAFAH1B3 (ENSMNEG00000038654) #19	CIC (ENSMNEG00000032857) #20	ERF (ENSMNEG00000035901) #21	GSK3A (ENSMNEG00000038536) #22	DEDD2 (ENSMNEG00000030378) #23	POU2F2 (ENSMNEG00000029149) #24	ENSMNEG00000020419 #25	ZNF574 (ENSMNEG00000034279) #26	GRIK5 (ENSMNEG00000041919) #27	ENSMNEG00000033887	ATP1A3 (ENSMNEG00000032260) #28	RABAC1 (ENSMNEG00000041557) #29	ERFL (ENSMNEG00000033425) #30	ARHGEF1 (ENSMNEG00000028757) #31	CD79A (ENSMNEG00000043118)	RPS19 (ENSMNEG00000012619)	DMRTC2 (ENSMNEG00000030925)	LYPD4 (ENSMNEG00000030179)	ENSMNEG00000041008 #14
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.b.c.a.b.a.a.a.b.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT01100000263539.b.a.a.a.b.b.a.b.b.b.b.b.a	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.z #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.b ##13
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000065464	ENSMFAG00000001177	CEACAM8 (ENSMFAG00000000741) #13	ENSMFAG00000046367 #14	CXCL17 (ENSMFAG00000050563) #15	LIPE (ENSMFAG00000030784) #16	CNFN (ENSMFAG00000035661)	ENSMFAG00000059804	MEGF8 (ENSMFAG00000043792) #17	TMEM145 (ENSMFAG00000037390) #18	PRR19 (ENSMFAG00000036917)	ENSMFAG00000031090 #19	CIC (ENSMFAG00000042927) #20	ERF (ENSMFAG00000035885) #21	ZNF526 (ENSMFAG00000044402)	GSK3A (ENSMFAG00000001497) #22	POU2F2 (ENSMFAG00000030322) #24	ENSMFAG00000049974	ENSMFAG00000049208	GRIK5 (ENSMFAG00000039157) #27	ATP1A3 (ENSMFAG00000000209) #28	RABAC1 (ENSMFAG00000030347) #29	ARHGEF1 (ENSMFAG00000032261) #31	CD79A (ENSMFAG00000001013)	ENSMFAG00000045611	ENSMFAG00000049391	DMRTC2 (ENSMFAG00000045593)	ENSMFAG00000049321	LYPD4 (ENSMFAG00000039631)	ENSMFAG00000001284 ##13	ENSMFAG00000057784 ##13
Cercopithecinae_b	ANCESTRAL SPECIES	24	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00510000048142.i.b	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b
Olive baboon	MODERN SPECIES	12	TEX101 (ENSPANG00000007650)	CD177 (ENSPANG00000002968)	ENSPANG00000003143 #13	ENSPANG00000001269 ##13	ENSPANG00000040562	ENSPANG00000005738 #14	CXCL17 (ENSPANG00000011863) #15	LIPE (ENSPANG00000008662) #16	CNFN (ENSPANG00000009950)	MEGF8 (ENSPANG00000013862) #17	TMEM145 (ENSPANG00000007222) #18	PRR19 (ENSPANG00000010671)	PAFAH1B3 (ENSPANG00000012468) #19	CIC (ENSPANG00000009039) #20	ERF (ENSPANG00000003832) #21	GSK3A (ENSPANG00000012948) #22	ZNF526 (ENSPANG00000023873)	DEDD2 (ENSPANG00000031170) #23	POU2F2 (ENSPANG00000008094) #24	ZNF574 (ENSPANG00000018272) #26	GRIK5 (ENSPANG00000021116) #27	ATP1A3 (ENSPANG00000002667) #28	RABAC1 (ENSPANG00000003146) #29	ERFL (ENSPANG00000025406) #30	ARHGEF1 (ENSPANG00000011864) #31	CD79A (ENSPANG00000013982)	ENSPANG00000008041	DMRTC2 (ENSPANG00000015477)	LYPD4 (ENSPANG00000005404)	ENSPANG00000024739 #14	ENSPANG00000033396 ##13
Cercopithecinae_d	ANCESTRAL SPECIES	84				ENSGT01100000263479.D.a.c.a.b.c.b ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.c.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00900000143631 #25	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00510000048142.i.b	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.c.a.a ##13
Sooty mangabey	MODERN SPECIES	274		ENSCATG00000034767 ##13	ENSCATG00000035421 ##13	ENSCATG00000038844 ##13	CEACAM8 (ENSCATG00000036104) #13	ENSCATG00000036965 #14	CXCL17 (ENSCATG00000040602) #15	LIPE (ENSCATG00000040670) #16	CNFN (ENSCATG00000038745)	MEGF8 (ENSCATG00000004269) #17	TMEM145 (ENSCATG00000037682) #18	PRR19 (ENSCATG00000040460)	PAFAH1B3 (ENSCATG00000040291) #19	CIC (ENSCATG00000039935) #20	ERF (ENSCATG00000031239) #21	GSK3A (ENSCATG00000045265) #22	DEDD2 (ENSCATG00000040748) #23	POU2F2 (ENSCATG00000037147) #24	ENSCATG00000043188 #25	ZNF574 (ENSCATG00000037432) #26	ENSCATG00000034830	GRIK5 (ENSCATG00000030312) #27	ATP1A3 (ENSCATG00000040558) #28	RABAC1 (ENSCATG00000041833) #29	ERFL (ENSCATG00000030550) #30	ARHGEF1 (ENSCATG00000031490) #31	CD79A (ENSCATG00000012116)	RPS19 (ENSCATG00000033159)	DMRTC2 (ENSCATG00000037958)	LYPD4 (ENSCATG00000034011)	ENSCATG00000027621 ##13
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.a #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.a #14
Hominidae	ANCESTRAL SPECIES		ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.b ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.b ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.e #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b #14
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.b.c ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.b.d.a ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.e #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00910000148701	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.b #14
Homo/Pan group	ANCESTRAL SPECIES		ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.b.d.a ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.b.a ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.e #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00910000148701	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.b #14
Pan	ANCESTRAL SPECIES	9	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.b.a.a ##13	ENSGT01100000263479.D.a.c.a.b.d.a.b.b.a.a.a.a.a.a.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.a #14	ENSGT00940000156165.`b.b	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00910000148701	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.b.b.b.a.b #14	ENSGT01100000263479.D.a.c.a.a.a.a.f.a #14
Chimpanzee	MODERN SPECIES	10	ENSPTRG00000045330 ##13	ENSPTRG00000048170 ##13	CEACAM8 (ENSPTRG00000011032) #13	CEACAM1 (ENSPTRG00000011061) #14	ENSPTRG00000038866	CXCL17 (ENSPTRG00000011060) #15	LIPE (ENSPTRG00000011058) #16	CNFN (ENSPTRG00000011057)	MEGF8 (ENSPTRG00000011055) #17	TMEM145 (ENSPTRG00000011054) #18	ENSPTRG00000052388	PRR19 (ENSPTRG00000011053)	PAFAH1B3 (ENSPTRG00000011052) #19	CIC (ENSPTRG00000011051) #20	ERF (ENSPTRG00000028999) #21	GSK3A (ENSPTRG00000011049) #22	DEDD2 (ENSPTRG00000011046) #23	POU2F2 (ENSPTRG00000011045) #24	ZNF574 (ENSPTRG00000011044) #26	GRIK5 (ENSPTRG00000011042) #27	ATP1A3 (ENSPTRG00000011041) #28	RABAC1 (ENSPTRG00000011040) #29	ERFL (ENSPTRG00000045867) #30	ARHGEF1 (ENSPTRG00000011039) #31	CD79A (ENSPTRG00000011038)	RPS19 (ENSPTRG00000011037)	DMRTC2 (ENSPTRG00000011036)	LYPD4 (ENSPTRG00000011035)	CEACAM3 (ENSPTRG00000011033) #14	CEACAM6 (ENSPTRG00000011063) #14	CEACAM5 (ENSPTRG00000011031) #14
Bonobo	MODERN SPECIES	10	ENSPPAG00000000864 ##13	PSG3 (ENSPPAG00000028128) ##13	CEACAM8 (ENSPPAG00000038978) #13	ENSPPAG00000034140 #14	ENSPPAG00000026064	CXCL17 (ENSPPAG00000000614) #15	LIPE (ENSPPAG00000042254) #16	CNFN (ENSPPAG00000037166)	MEGF8 (ENSPPAG00000026919) #17	TMEM145 (ENSPPAG00000038297) #18	ENSPPAG00000018447	PRR19 (ENSPPAG00000022293)	ENSPPAG00000026311 #19	CIC (ENSPPAG00000034281) #20	ERF (ENSPPAG00000027990) #21	GSK3A (ENSPPAG00000036611) #22	DEDD2 (ENSPPAG00000042718) #23	POU2F2 (ENSPPAG00000038336) #24	ZNF574 (ENSPPAG00000005476) #26	GRIK5 (ENSPPAG00000035623) #27	ATP1A3 (ENSPPAG00000039434) #28	RABAC1 (ENSPPAG00000038053) #29	ERFL (ENSPPAG00000032217) #30	ARHGEF1 (ENSPPAG00000039794) #31	CD79A (ENSPPAG00000038624)	RPS19 (ENSPPAG00000041030)	ENSPPAG00000042029	LYPD4 (ENSPPAG00000008791)	CEACAM3 (ENSPPAG00000038264) #14	CEACAM6 (ENSPPAG00000035405) #14	CEACAM5 (ENSPPAG00000033350) #14
Human	MODERN SPECIES	10	PSG1 (ENSG00000231924) ##13	PSG8 (ENSG00000124467) ##13	PSG3 (ENSG00000221826) ##13	CEACAM8 (ENSG00000124469) #13	CEACAM1 (ENSG00000079385) #14	CXCL17 (ENSG00000189377) #15	LIPE (ENSG00000079435) #16	CNFN (ENSG00000105427)	MEGF8 (ENSG00000105429) #17	TMEM145 (ENSG00000167619) #18	PRR19 (ENSG00000188368)	PAFAH1B3 (ENSG00000079462) #19	CIC (ENSG00000079432) #20	ERF (ENSG00000105722) #21	ENSG00000268643	GSK3A (ENSG00000105723) #22	ZNF526 (ENSG00000167625)	ENSG00000288671	DEDD2 (ENSG00000160570) #23	POU2F2 (ENSG00000028277) #24	ZNF574 (ENSG00000105732) #26	GRIK5 (ENSG00000105737) #27	ATP1A3 (ENSG00000105409) #28	RABAC1 (ENSG00000105404) #29	ERFL (ENSG00000268041) #30	ARHGEF1 (ENSG00000076928) #31	CD79A (ENSG00000105369)	RPS19 (ENSG00000105372)	DMRTC2 (ENSG00000142025)	LYPD4 (ENSG00000273111)	CEACAM3 (ENSG00000170956) #14
Gorilla	MODERN SPECIES	10	ENSGGOG00000012005 ##13	ENSGGOG00000010966 ##13	CEACAM8 (ENSGGOG00000012684) #13	ENSGGOG00000005936 #14	ENSGGOG00000039327	CXCL17 (ENSGGOG00000000763) #15	LIPE (ENSGGOG00000000761) #16	CNFN (ENSGGOG00000000760)	MEGF8 (ENSGGOG00000000758) #17	TMEM145 (ENSGGOG00000024254) #18	ENSGGOG00000037328	PRR19 (ENSGGOG00000013249)	PAFAH1B3 (ENSGGOG00000013243) #19	CIC (ENSGGOG00000000192) #20	ERF (ENSGGOG00000004656) #21	GSK3A (ENSGGOG00000004649) #22	DEDD2 (ENSGGOG00000009107) #23	POU2F2 (ENSGGOG00000011088) #24	ZNF574 (ENSGGOG00000027095) #26	GRIK5 (ENSGGOG00000013654) #27	ATP1A3 (ENSGGOG00000005963) #28	RABAC1 (ENSGGOG00000003948) #29	ERFL (ENSGGOG00000022280) #30	ARHGEF1 (ENSGGOG00000015282) #31	CD79A (ENSGGOG00000015280)	RPS19 (ENSGGOG00000015279)	DMRTC2 (ENSGGOG00000015274)	LYPD4 (ENSGGOG00000010514)	ENSGGOG00000012591 #14	ENSGGOG00000026338 #14	CEACAM5 (ENSGGOG00000010044) #14
Orangutan	MODERN SPECIES	10	ENSPPYG00000032845 ##13	PSG8 (ENSPPYG00000035850) ##13	ENSPPYG00000041166 ##13	ENSPPYG00000036327 ##13	ENSPPYG00000010537 ##13	CEACAM8 (ENSPPYG00000010023) #13	CEACAM1 (ENSPPYG00000010050) #14	CXCL17 (ENSPPYG00000031148) #15	LIPE (ENSPPYG00000010048) #16	ENSPPYG00000041577	MEGF8 (ENSPPYG00000031085) #17	TMEM145 (ENSPPYG00000010044) #18	PRR19 (ENSPPYG00000010043)	ENSPPYG00000010042 #19	ERF (ENSPPYG00000010040) #21	GSK3A (ENSPPYG00000010039) #22	ZNF526 (ENSPPYG00000010038)	DEDD2 (ENSPPYG00000010037) #23	POU2F2 (ENSPPYG00000010036) #24	ZNF574 (ENSPPYG00000010035) #26	GRIK5 (ENSPPYG00000010034) #27	ATP1A3 (ENSPPYG00000010033) #28	RABAC1 (ENSPPYG00000033290) #29	ERFL (ENSPPYG00000030541) #30	ARHGEF1 (ENSPPYG00000010031) #31	CD79A (ENSPPYG00000010030)	RPS19 (ENSPPYG00000010029)	DMRTC2 (ENSPPYG00000010028)	LYPD4 (ENSPPYG00000010027)	CEACAM3 (ENSPPYG00000010026) #14	CEACAM6 (ENSPPYG00000010024) #14
Gibbon	MODERN SPECIES	7	ENSNLEG00000030339 ##13	ENSNLEG00000032602 ##13	ENSNLEG00000032718 ##13	ENSNLEG00000028913 ##13	ENSNLEG00000028328 ##13	ENSNLEG00000010828 ##13	CEACAM8 (ENSNLEG00000010809) #13	ENSNLEG00000010744 #14	CXCL17 (ENSNLEG00000010731) #15	LIPE (ENSNLEG00000010707) #16	CNFN (ENSNLEG00000010692)	MEGF8 (ENSNLEG00000026558) #17	TMEM145 (ENSNLEG00000010654) #18	PAFAH1B3 (ENSNLEG00000010622) #19	CIC (ENSNLEG00000010614) #20	GSK3A (ENSNLEG00000010609) #22	ZNF526 (ENSNLEG00000018866)	DEDD2 (ENSNLEG00000010600) #23	ENSNLEG00000010575 #24	ENSNLEG00000035078 #26	GRIK5 (ENSNLEG00000026639) #27	ATP1A3 (ENSNLEG00000013414) #28	RABAC1 (ENSNLEG00000013444) #29	ERFL (ENSNLEG00000013477) #30	ENSNLEG00000013480 #31	CD79A (ENSNLEG00000013502)	ENSNLEG00000027781	DMRTC2 (ENSNLEG00000013548)	LYPD4 (ENSNLEG00000013578)	ENSNLEG00000031903 #14	ENSNLEG00000013585 #14
Platyrrhini	ANCESTRAL SPECIES	20	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.b.b #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799.b #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549.b #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.b.a #14	ENSGT01100000263479.D.a.c.a.a.b ##13
Cebidae	ANCESTRAL SPECIES	8	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.c.a.b.a ##13	ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.b.b #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799.b #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549.b #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.b.a #14
Cebidae_a	ANCESTRAL SPECIES	55					ENSGT01100000263479.D.a.c.a.a.a.b #13	ENSGT01100000263479.D.a.c.a.a.a.a.b.b #14	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799.b #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549.b #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a.a.a.a.a #14	ENSGT01100000263479.D.a.c.a.a.a.a.b.a #14
Capuchin	MODERN SPECIES	306					CEACAM8 (ENSCCAG00000022335) #13	ENSCCAG00000022166 #14	CXCL17 (ENSCCAG00000027291) #15	LIPE (ENSCCAG00000031538) #16	CNFN (ENSCCAG00000030183)	MEGF8 (ENSCCAG00000021324) #17	TMEM145 (ENSCCAG00000033785) #18	PRR19 (ENSCCAG00000028670)	PAFAH1B3 (ENSCCAG00000002974) #19	CIC (ENSCCAG00000035181) #20	ERF (ENSCCAG00000027152) #21	GSK3A (ENSCCAG00000038124) #22	ZNF526 (ENSCCAG00000019875)	DEDD2 (ENSCCAG00000034550) #23	POU2F2 (ENSCCAG00000035483) #24	ZNF574 (ENSCCAG00000032818) #26	GRIK5 (ENSCCAG00000037408) #27	ATP1A3 (ENSCCAG00000034309) #28	RABAC1 (ENSCCAG00000031894) #29	ERFL (ENSCCAG00000030582) #30	ARHGEF1 (ENSCCAG00000036552) #31	CD79A (ENSCCAG00000037944)	RPS19 (ENSCCAG00000033416)	DMRTC2 (ENSCCAG00000019056)	LYPD4 (ENSCCAG00000030413)	ENSCCAG00000038050 #14	ENSCCAG00000023866 #14
Bolivian squirrel monkey	MODERN SPECIES	218				ENSSBOG00000030354 ##13	CEACAM8 (ENSSBOG00000025143) #13	ENSSBOG00000021420 #14	CXCL17 (ENSSBOG00000027519) #15	LIPE (ENSSBOG00000019446) #16	CNFN (ENSSBOG00000028577)	MEGF8 (ENSSBOG00000028003) #17	TMEM145 (ENSSBOG00000035029) #18	PRR19 (ENSSBOG00000019280)	PAFAH1B3 (ENSSBOG00000030086) #19	CIC (ENSSBOG00000013569) #20	ERF (ENSSBOG00000020853) #21	GSK3A (ENSSBOG00000022542) #22	ZNF526 (ENSSBOG00000019562)	DEDD2 (ENSSBOG00000030981) #23	POU2F2 (ENSSBOG00000024365) #24	ZNF574 (ENSSBOG00000027597) #26	GRIK5 (ENSSBOG00000022110) #27	ATP1A3 (ENSSBOG00000026931) #28	RABAC1 (ENSSBOG00000018697) #29	ERFL (ENSSBOG00000028753) #30	ARHGEF1 (ENSSBOG00000034166) #31	CD79A (ENSSBOG00000026660)	RPS19 (ENSSBOG00000026946)	DMRTC2 (ENSSBOG00000016003)	LYPD4 (ENSSBOG00000033436)	ENSSBOG00000031490 #14	ENSSBOG00000022104 #14
Marmoset	MODERN SPECIES	14	ENSCJAG00000080826	ENSCJAG00000017073 ##13	ENSCJAG00000047070 ##13	CEACAM8 (ENSCJAG00000046660) #13	ENSCJAG00000079965	ENSCJAG00000012987 #14	CXCL17 (ENSCJAG00000012985) #15	LIPE (ENSCJAG00000012963) #16	CNFN (ENSCJAG00000012952)	ENSCJAG00000012930 #17	TMEM145 (ENSCJAG00000012919) #18	PRR19 (ENSCJAG00000012914)	PAFAH1B3 (ENSCJAG00000012900) #19	CIC (ENSCJAG00000012847) #20	ERF (ENSCJAG00000058052) #21	GSK3A (ENSCJAG00000012791) #22	ZNF526 (ENSCJAG00000012788)	DEDD2 (ENSCJAG00000012770) #23	POU2F2 (ENSCJAG00000012753) #24	ZNF574 (ENSCJAG00000043982) #26	GRIK5 (ENSCJAG00000012725) #27	ATP1A3 (ENSCJAG00000012623) #28	RABAC1 (ENSCJAG00000012607) #29	ERFL (ENSCJAG00000020277) #30	ARHGEF1 (ENSCJAG00000020252) #31	CD79A (ENSCJAG00000020247)	ENSCJAG00000020243	DMRTC2 (ENSCJAG00000020238)	LYPD4 (ENSCJAG00000020234)	ENSCJAG00000037018 #14	CEACAM7 (ENSCJAG00000020206) ##13
Mas night monkey	MODERN SPECIES	472				CEACAM8 (ENSANAG00000030725) #13	ENSANAG00000024195 #14	ENSANAG00000013269	CXCL17 (ENSANAG00000034293) #15	LIPE (ENSANAG00000019026) #16	CNFN (ENSANAG00000028219)	MEGF8 (ENSANAG00000028714) #17	TMEM145 (ENSANAG00000022076) #18	PRR19 (ENSANAG00000035399)	ENSANAG00000000178 #19	CIC (ENSANAG00000025026) #20	ERF (ENSANAG00000029577) #21	GSK3A (ENSANAG00000035264) #22	ZNF526 (ENSANAG00000035364)	DEDD2 (ENSANAG00000028365) #23	POU2F2 (ENSANAG00000035824) #24	ZNF574 (ENSANAG00000034608) #26	GRIK5 (ENSANAG00000038058) #27	ATP1A3 (ENSANAG00000023145) #28	ENSANAG00000019937 #29	ERFL (ENSANAG00000027041) #30	ARHGEF1 (ENSANAG00000020006) #31	CD79A (ENSANAG00000034787)	RPS19 (ENSANAG00000036544)	DMRTC2 (ENSANAG00000033057)	LYPD4 (ENSANAG00000029410)	ENSANAG00000020658 #14	CEACAM7 (ENSANAG00000023773) ##13
Tarsier	MODERN SPECIES	1791															ERF (ENSTSYG00000006095) #21	GSK3A (ENSTSYG00000030603) #22	DEDD2 (ENSTSYG00000036999) #23
Strepsirrhini	ANCESTRAL SPECIES	16							ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b ##13	ENSGT00530000063351.a.a
Lemuriformes	ANCESTRAL SPECIES	15							ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a #13	ENSGT01100000263479.D.a.c.b ##13
Mouse lemur	MODERN SPECIES	14	U2AF2 (ENSMICG00000027681)	EPN1 (ENSMICG00000030667)	ENSMICG00000031661	ENSMICG00000042403	ENSMICG00000045244 ##13	ENSMICG00000036846 ##13	CXCL17 (ENSMICG00000047306) #15	LIPE (ENSMICG00000015308) #16	CNFN (ENSMICG00000041430)	MEGF8 (ENSMICG00000015225) #17	TMEM145 (ENSMICG00000015206) #18	PRR19 (ENSMICG00000015202)	CIC (ENSMICG00000030301) #20	PAFAH1B3 (ENSMICG00000015196) #19	ERF (ENSMICG00000004694) #21	GSK3A (ENSMICG00000046754) #22	DEDD2 (ENSMICG00000015165) #23	POU2F2 (ENSMICG00000015156) #24	ZNF574 (ENSMICG00000014468) #26	GRIK5 (ENSMICG00000015136) #27	ATP1A3 (ENSMICG00000008581) #28	RABAC1 (ENSMICG00000008574) #29	ERFL (ENSMICG00000009519) #30	ARHGEF1 (ENSMICG00000009512) #31	CD79A (ENSMICG00000004558)	ENSMICG00000004554	DMRTC2 (ENSMICG00000004546)	LYPD4 (ENSMICG00000004542)	ENSMICG00000009289	ENSMICG00000003336 ##13	ENSMICG00000015362 ##13
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a.w	ENSGT01100000263479.D.a.c.b.j.a ##13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.a #13
Coquerels sifaka	MODERN SPECIES	568	ZNF575 (ENSPCOG00000019955)	ETHE1 (ENSPCOG00000023403)	PHLDB3 (ENSPCOG00000026283)	LYPD3 (ENSPCOG00000013646)	TEX101 (ENSPCOG00000024580)	CD177 (ENSPCOG00000005033)	ENSPCOG00000018850 ##13	CXCL17 (ENSPCOG00000012786) #15	LIPE (ENSPCOG00000023640) #16	MEGF8 (ENSPCOG00000011104) #17	TMEM145 (ENSPCOG00000014640) #18	PRR19 (ENSPCOG00000013235)	ENSPCOG00000024389 #19	CIC (ENSPCOG00000000853) #20	ERF (ENSPCOG00000021324) #21	GSK3A (ENSPCOG00000018246) #22	DEDD2 (ENSPCOG00000016557) #23	POU2F2 (ENSPCOG00000014028) #24	ZNF574 (ENSPCOG00000026282) #26	GRIK5 (ENSPCOG00000024041) #27	ATP1A3 (ENSPCOG00000021213) #28	RABAC1 (ENSPCOG00000002815) #29	ERFL (ENSPCOG00000020979) #30	ARHGEF1 (ENSPCOG00000016706) #31	CD79A (ENSPCOG00000022258)	RPS19 (ENSPCOG00000009850)	DMRTC2 (ENSPCOG00000008626)	LYPD4 (ENSPCOG00000022609)	ENSPCOG00000017032 ##13	ENSPCOG00000007574 ##13	ENSPCOG00000019249 ##13
Greater bamboo lemur	MODERN SPECIES	426								LIPE (ENSPSMG00000017461) #16	CNFN (ENSPSMG00000017424)	MEGF8 (ENSPSMG00000017417) #17	TMEM145 (ENSPSMG00000017408) #18	PRR19 (ENSPSMG00000017364)	PAFAH1B3 (ENSPSMG00000017360) #19	CIC (ENSPSMG00000017260) #20	ERF (ENSPSMG00000017164) #21	GSK3A (ENSPSMG00000017100) #22	ZNF526 (ENSPSMG00000017031)	DEDD2 (ENSPSMG00000017024) #23	POU2F2 (ENSPSMG00000016965) #24	ZNF574 (ENSPSMG00000016813) #26	GRIK5 (ENSPSMG00000016806) #27	ATP1A3 (ENSPSMG00000016692) #28	ERFL (ENSPSMG00000016248) #30	ARHGEF1 (ENSPSMG00000016214) #31	CD79A (ENSPSMG00000016063)	RPS19 (ENSPSMG00000016049)	DMRTC2 (ENSPSMG00000016031)	LYPD4 (ENSPSMG00000016018)	ENSPSMG00000015967 #13
Bushbaby	MODERN SPECIES	267	ZNF575 (ENSOGAG00000027522)	ETHE1 (ENSOGAG00000009504)	PHLDB3 (ENSOGAG00000031884)	LYPD3 (ENSOGAG00000009282)	TEX101 (ENSOGAG00000009279)	CD177 (ENSOGAG00000010373)	ENSOGAG00000002909 ##13	LIPE (ENSOGAG00000013637) #16	CNFN (ENSOGAG00000032095)	MEGF8 (ENSOGAG00000013619) #17	TMEM145 (ENSOGAG00000027203) #18	PRR19 (ENSOGAG00000032028)	PAFAH1B3 (ENSOGAG00000030084) #19	CIC (ENSOGAG00000003964) #20	ERF (ENSOGAG00000033523) #21	GSK3A (ENSOGAG00000008509) #22	ZNF526 (ENSOGAG00000031877)	DEDD2 (ENSOGAG00000027751) #23	POU2F2 (ENSOGAG00000007840) #24	ZNF574 (ENSOGAG00000030944) #26	GRIK5 (ENSOGAG00000015433) #27	ATP1A3 (ENSOGAG00000004731) #28	RABAC1 (ENSOGAG00000001786) #29	ARHGEF1 (ENSOGAG00000005684) #31	CD79A (ENSOGAG00000012001)	RPS19 (ENSOGAG00000026255)	DMRTC2 (ENSOGAG00000011998)	LYPD4 (ENSOGAG00000025037)	ENSOGAG00000032743 ##13	ENSOGAG00000012575 ##13
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00530000063351.b
Tree shrew	MODERN SPECIES	3510															ERF (ENSTBEG00000000114) #21	GSK3A (ENSTBEG00000000101) #22	ZNF526 (ENSTBEG00000000084)
Glires	ANCESTRAL SPECIES	6	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00530000063351.b
Lagomorpha	ANCESTRAL SPECIES	152	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00390000006319	ENSGT00940000160500	ENSGT01100000263479.D.a.c.a #13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26
Rabbit	MODERN SPECIES	522	BCKDHA (ENSOCUG00000023789)	B3GNT8 (ENSOCUG00000027388)	ERICH4 (ENSOCUG00000029714)	DMAC2 (ENSOCUG00000029322)	ENSOCUG00000008689 #13	CXCL17 (ENSOCUG00000021666) #15	ENSOCUG00000035805	LIPE (ENSOCUG00000000017) #16	CNFN (ENSOCUG00000006494)	ENSOCUG00000006479 #17	TMEM145 (ENSOCUG00000004380) #18	PRR19 (ENSOCUG00000023652)	PAFAH1B3 (ENSOCUG00000006470) #19	CIC (ENSOCUG00000006458) #20	ERF (ENSOCUG00000039541) #21	GSK3A (ENSOCUG00000006441) #22	ZNF526 (ENSOCUG00000029615)	DEDD2 (ENSOCUG00000006435) #23	POU2F2 (ENSOCUG00000021776) #24	ZNF574 (ENSOCUG00000037409) #26
Pika	MODERN SPECIES	2615																GSK3A (ENSOPRG00000010851) #22	ZNF526 (ENSOPRG00000010847)	DEDD2 (ENSOPRG00000010833) #23
Rodentia	ANCESTRAL SPECIES	8	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.b ##13	ENSGT00530000063351.a.a.z
Rodentia_B	ANCESTRAL SPECIES	20	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT01100000263479.A ##13
Kangaroo rat	MODERN SPECIES	475	Zfp428 (ENSDORG00000028524)	Pinlyp (ENSDORG00000006113)	Xrcc1 (ENSDORG00000006108)	Ethe1 (ENSDORG00000002169)	Phldb3 (ENSDORG00000002164)	Lypd3 (ENSDORG00000010164)	ENSDORG00000006243 ##13	Lipe (ENSDORG00000007951) #16	Cnfn (ENSDORG00000007950)	Megf8 (ENSDORG00000007946) #17	Tmem145 (ENSDORG00000007941) #18	Prr19 (ENSDORG00000007940)	Pafah1b3 (ENSDORG00000008817) #19	Cic (ENSDORG00000008822) #20	Erf (ENSDORG00000008823) #21	Gsk3a (ENSDORG00000008826) #22	Zfp526 (ENSDORG00000024798)	Dedd2 (ENSDORG00000026250) #23	Pou2f2 (ENSDORG00000025719) #24	Zfp574 (ENSDORG00000009702) #26	Grik5 (ENSDORG00000013438) #27	Atp1a3 (ENSDORG00000006771) #28	Rabac1 (ENSDORG00000006773) #29	Erfl (ENSDORG00000024424) #30	Arhgef1 (ENSDORG00000010815) #31	Cd79a (ENSDORG00000010814)	ENSDORG00000010812	Dmrtc2 (ENSDORG00000010810)	ENSDORG00000026563	Ttc9b (ENSDORG00000023658)	Akt2 (ENSDORG00000003591)
Myomorpha	ANCESTRAL SPECIES	20	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00530000063351.a.a.z
Lesser Egyptian jerboa	MODERN SPECIES	186	Cyp2g1 (ENSJJAG00000009018)	ENSJJAG00000015776	Ethe1 (ENSJJAG00000013800)	ENSJJAG00000013197	Lypd3 (ENSJJAG00000012768)	ENSJJAG00000016385 ##13	ENSJJAG00000015232	ENSJJAG00000014623 #16	Cnfn (ENSJJAG00000013769)	ENSJJAG00000013061 #17	Tmem145 (ENSJJAG00000012149) #18	Prr19 (ENSJJAG00000011188)	Pafah1b3 (ENSJJAG00000010925) #19	Cic (ENSJJAG00000004156) #20	Erf (ENSJJAG00000000412) #21	Gsk3a (ENSJJAG00000000137) #22	Zfp526 (ENSJJAG00000014793)	ENSJJAG00000022418 #23	Pou2f2 (ENSJJAG00000022155) #24	Zfp574 (ENSJJAG00000021785) #26	Grik5 (ENSJJAG00000015626) #27	Atp1a3 (ENSJJAG00000012190) #28	Erfl (ENSJJAG00000003327) #30	Arhgef1 (ENSJJAG00000019422) #31	Cd79a (ENSJJAG00000016983)	ENSJJAG00000016317	Dmrtc2 (ENSJJAG00000016059)	Lypd4 (ENSJJAG00000015698)	Erich4 (ENSJJAG00000015588)	Dmac2 (ENSJJAG00000015253)	B3gnt8 (ENSJJAG00000013842)
Muroidea	ANCESTRAL SPECIES	18	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00530000063351.a.a.z
Upper Galilee mountains blind mole rat	MODERN SPECIES	1327						ENSNGAG00000024225 #13	Lipe (ENSNGAG00000023105) #16	Cnfn (ENSNGAG00000005377)	Megf8 (ENSNGAG00000014330) #17	Tmem145 (ENSNGAG00000007684) #18	Prr19 (ENSNGAG00000012197)	Pafah1b3 (ENSNGAG00000017511) #19	ENSNGAG00000020734	ENSNGAG00000014614 #20	Erf (ENSNGAG00000005013) #21	Gsk3a (ENSNGAG00000018555) #22	Zfp526 (ENSNGAG00000018114)	Dedd2 (ENSNGAG00000021900) #23	Pou2f2 (ENSNGAG00000021598) #24	Zfp574 (ENSNGAG00000001555) #26	Grik5 (ENSNGAG00000024062) #27	Atp1a3 (ENSNGAG00000012235) #28	Rabac1 (ENSNGAG00000024184) #29	Erfl (ENSNGAG00000024008) #30	Arhgef1 (ENSNGAG00000004918) #31	Cd79a (ENSNGAG00000016621)	ENSNGAG00000023087	ENSNGAG00000015795	ENSNGAG00000015634	Dmrtc2 (ENSNGAG00000006066)
Muroidea_A	ANCESTRAL SPECIES	20	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13
Murinae	ANCESTRAL SPECIES	19	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13
Mus	ANCESTRAL SPECIES		ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13
Mus_A	ANCESTRAL SPECIES	1	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.a.a ##13
Mus_B	ANCESTRAL SPECIES		ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.y.a.a.b
Mus_C	ANCESTRAL SPECIES	15	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.A ##13
spretus	MODERN SPECIES	16	Exosc5 (MGP_SPRETEiJ_G0030472)	Bckdha (MGP_SPRETEiJ_G0030471)	B3gnt8 (MGP_SPRETEiJ_G0030470)	Dmac2 (MGP_SPRETEiJ_G0030469)	Erich4 (MGP_SPRETEiJ_G0030468)	MGP_SPRETEiJ_G0030467	Cxcl17 (MGP_SPRETEiJ_G0030466) #15	Lipe (MGP_SPRETEiJ_G0030465) #16	Cnfn (MGP_SPRETEiJ_G0030464)	Megf8 (MGP_SPRETEiJ_G0030463) #17	Tmem145 (MGP_SPRETEiJ_G0030462) #18	Prr19 (MGP_SPRETEiJ_G0030461)	Pafah1b3 (MGP_SPRETEiJ_G0030460) #19	Cic (MGP_SPRETEiJ_G0030459) #20	Erf (MGP_SPRETEiJ_G0030458) #21	Gsk3a (MGP_SPRETEiJ_G0030457) #22	Zfp526 (MGP_SPRETEiJ_G0030456)	Dedd2 (MGP_SPRETEiJ_G0030455) #23	Pou2f2 (MGP_SPRETEiJ_G0030454) #24	Zfp574 (MGP_SPRETEiJ_G0030453) #26	Grik5 (MGP_SPRETEiJ_G0030452) #27	Atp1a3 (MGP_SPRETEiJ_G0030451) #28	Rabac1 (MGP_SPRETEiJ_G0030450) #29	Arhgef1 (MGP_SPRETEiJ_G0030448) #31	Cd79a (MGP_SPRETEiJ_G0030447)	MGP_SPRETEiJ_G0030446	Dmrtc2 (MGP_SPRETEiJ_G0030445)	Lypd4 (MGP_SPRETEiJ_G0030444)	MGP_SPRETEiJ_G0030443 ##13	Cd177 (MGP_SPRETEiJ_G0030442)	Lypd11 (MGP_SPRETEiJ_G0030441)
Steppe mouse	MODERN SPECIES	2675					ENSMSIG00000012187 #15	ENSMSIG00000012175	Lipe (ENSMSIG00000012081) #16	Cnfn (ENSMSIG00000012052)	Megf8 (ENSMSIG00000012015) #17	Tmem145 (ENSMSIG00000011940) #18	ENSMSIG00000011932	Pafah1b3 (ENSMSIG00000011919) #19	Cic (ENSMSIG00000011872) #20	Erf (ENSMSIG00000011854) #21	ENSMSIG00000011846	Gsk3a (ENSMSIG00000011808) #22	Zfp526 (ENSMSIG00000011798)	Dedd2 (ENSMSIG00000011774) #23	ENSMSIG00000011759	Pou2f2 (ENSMSIG00000010661) #24	Zfp574 (ENSMSIG00000010639) #26	ENSMSIG00000010626	Grik5 (ENSMSIG00000010580) #27	Atp1a3 (ENSMSIG00000010376) #28	ENSMSIG00000010352 #29	Erfl (ENSMSIG00000010340) #30	Arhgef1 (ENSMSIG00000009574) #31	Cd79a (ENSMSIG00000009558)	ENSMSIG00000009499	Dmrtc2 (ENSMSIG00000009458)	Lypd4 (ENSMSIG00000009428)
Mouse	MODERN SPECIES	16	Bckdha (ENSMUSG00000060376)	B3gnt8 (ENSMUSG00000059479)	Dmac2 (ENSMUSG00000057229)	Erich4 (ENSMUSG00000074261)	Ceacam2 (ENSMUSG00000054385) ##13	Ceacam1 (ENSMUSG00000074272) ##13	Cxcl17 (ENSMUSG00000060188) #15	Lipe (ENSMUSG00000003123) #16	Cnfn (ENSMUSG00000063651)	Megf8 (ENSMUSG00000045039) #17	Tmem145 (ENSMUSG00000043843) #18	Prr19 (ENSMUSG00000058741)	Pafah1b3 (ENSMUSG00000005447) #19	Cic (ENSMUSG00000005442) #20	Erf (ENSMUSG00000040857) #21	Gsk3a (ENSMUSG00000057177) #22	Zfp526 (ENSMUSG00000046541)	Dedd2 (ENSMUSG00000054499) #23	Pou2f2 (ENSMUSG00000008496) #24	Zfp574 (ENSMUSG00000045252) #26	Grik5 (ENSMUSG00000003378) #27	Atp1a3 (ENSMUSG00000040907) #28	Rabac1 (ENSMUSG00000003380) #29	Erfl (ENSMUSG00000108367) #30	Arhgef1 (ENSMUSG00000040940) #31	Cd79a (ENSMUSG00000003379)	Rps19 (ENSMUSG00000040952)	Dmrtc2 (ENSMUSG00000011349)	Lypd4 (ENSMUSG00000062732)	Tmsb10b (ENSMUSG00000091955)	Ceacam10 (ENSMUSG00000054169) ##13
Ryukyu mouse	MODERN SPECIES	16	Bckdha (MGP_CAROLIEiJ_G0029375)	B3gnt8 (MGP_CAROLIEiJ_G0029374)	Dmac2 (MGP_CAROLIEiJ_G0029373)	Erich4 (MGP_CAROLIEiJ_G0029372)	MGP_CAROLIEiJ_G0029371 ##13	MGP_CAROLIEiJ_G0029370 ##13	Cxcl17 (MGP_CAROLIEiJ_G0029369) #15	Lipe (MGP_CAROLIEiJ_G0029368) #16	Cnfn (MGP_CAROLIEiJ_G0029367)	Megf8 (MGP_CAROLIEiJ_G0029366) #17	Tmem145 (MGP_CAROLIEiJ_G0029365) #18	Prr19 (MGP_CAROLIEiJ_G0029364)	Pafah1b3 (MGP_CAROLIEiJ_G0029363) #19	Cic (MGP_CAROLIEiJ_G0029362) #20	Erf (MGP_CAROLIEiJ_G0029361) #21	Gsk3a (MGP_CAROLIEiJ_G0029360) #22	Zfp526 (MGP_CAROLIEiJ_G0029359)	Dedd2 (MGP_CAROLIEiJ_G0029358) #23	Pou2f2 (MGP_CAROLIEiJ_G0029357) #24	Zfp574 (MGP_CAROLIEiJ_G0029356) #26	Grik5 (MGP_CAROLIEiJ_G0029355) #27	Atp1a3 (MGP_CAROLIEiJ_G0029354) #28	Rabac1 (MGP_CAROLIEiJ_G0029353) #29	Arhgef1 (MGP_CAROLIEiJ_G0029351) #31	Cd79a (MGP_CAROLIEiJ_G0029350)	MGP_CAROLIEiJ_G0029349	Dmrtc2 (MGP_CAROLIEiJ_G0029348)	Lypd4 (MGP_CAROLIEiJ_G0029347)	Ceacam10 (MGP_CAROLIEiJ_G0029346) ##13	Tex101 (MGP_CAROLIEiJ_G0029345)	Lypd3 (MGP_CAROLIEiJ_G0029344)
Shrew mouse	MODERN SPECIES	10	Bckdha (MGP_PahariEiJ_G0021228)	B3gnt8 (MGP_PahariEiJ_G0021227)	Dmac2 (MGP_PahariEiJ_G0021226)	Erich4 (MGP_PahariEiJ_G0021225)	MGP_PahariEiJ_G0021224 ##13	MGP_PahariEiJ_G0021223 ##13	Cxcl17 (MGP_PahariEiJ_G0021222) #15	Lipe (MGP_PahariEiJ_G0021221) #16	Cnfn (MGP_PahariEiJ_G0021220)	Megf8 (MGP_PahariEiJ_G0021219) #17	Tmem145 (MGP_PahariEiJ_G0021218) #18	Prr19 (MGP_PahariEiJ_G0021217)	Pafah1b3 (MGP_PahariEiJ_G0021216) #19	Cic (MGP_PahariEiJ_G0021215) #20	Erf (MGP_PahariEiJ_G0021214) #21	Gsk3a (MGP_PahariEiJ_G0021213) #22	Zfp526 (MGP_PahariEiJ_G0021212)	Dedd2 (MGP_PahariEiJ_G0021211) #23	Pou2f2 (MGP_PahariEiJ_G0021210) #24	Zfp574 (MGP_PahariEiJ_G0021209) #26	Grik5 (MGP_PahariEiJ_G0021208) #27	Atp1a3 (MGP_PahariEiJ_G0021207) #28	MGP_PahariEiJ_G0021206 #29	Arhgef1 (MGP_PahariEiJ_G0021204) #31	Cd79a (MGP_PahariEiJ_G0021203)	MGP_PahariEiJ_G0021202	Dmrtc2 (MGP_PahariEiJ_G0021201)	Lypd4 (MGP_PahariEiJ_G0021200)	Ceacam10 (MGP_PahariEiJ_G0021199) ##13	Cd177 (MGP_PahariEiJ_G0021198)	Tex101 (MGP_PahariEiJ_G0021196)
Rat	MODERN SPECIES		Bckdha (ENSRNOG00000020607)	B3gnt8 (ENSRNOG00000068024)	Dmac2 (ENSRNOG00000020596)	Erich4 (ENSRNOG00000037798)	Ceacam1 (ENSRNOG00000020578) ##13	Cxcl17 (ENSRNOG00000037814) #15	AC121639.1 (ENSRNOG00000020538)	Lipe (ENSRNOG00000020546) #16	Cnfn (ENSRNOG00000020530)	Megf8 (ENSRNOG00000052687) #17	Tmem145 (ENSRNOG00000020489) #18	Prr19 (ENSRNOG00000043154)	Pafah1b3 (ENSRNOG00000020481) #19	Cic (ENSRNOG00000056118) #20	Erf (ENSRNOG00000020426) #21	Gsk3a (ENSRNOG00000020417) #22	Zfp526 (ENSRNOG00000047526)	Dedd2 (ENSRNOG00000046112) #23	Pou2f2 (ENSRNOG00000055650) #24	Zfp574 (ENSRNOG00000055761) #26	Grik5 (ENSRNOG00000020310) #27	Atp1a3 (ENSRNOG00000020263) #28	Rabac1 (ENSRNOG00000020233) #29	Erfl (ENSRNOG00000068986) #30	Arhgef1 (ENSRNOG00000020130) #31	Cd79a (ENSRNOG00000020125)	Rps19 (ENSRNOG00000037897)	Dmrtc2 (ENSRNOG00000020109)	Lypd4 (ENSRNOG00000020098)	Ceacam6 (ENSRNOG00000030331) ##13	Ceacam4 (ENSRNOG00000046222) ##13
Cricetidae	ANCESTRAL SPECIES	26						ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z
Cricetidae_B	ANCESTRAL SPECIES	41	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a.z	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00960000192716	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b	ENSGT00390000013102.f.p	ENSGT00940000161904	ENSGT00530000063351.a.b
Northern American deer mouse	MODERN SPECIES		B3gnt8 (ENSPEMG00000005745)	Dmac2 (ENSPEMG00000010806)	Erich4 (ENSPEMG00000029662)	ENSPEMG00000031064 ##13	ENSPEMG00000017731	ENSPEMG00000012395 ##13	Cxcl17 (ENSPEMG00000013212) #15	Lipe (ENSPEMG00000018430) #16	Cnfn (ENSPEMG00000008799)	Megf8 (ENSPEMG00000015992) #17	Tmem145 (ENSPEMG00000008836) #18	Prr19 (ENSPEMG00000017854)	Pafah1b3 (ENSPEMG00000009631) #19	Cic (ENSPEMG00000009522) #20	Erf (ENSPEMG00000015322) #21	Gsk3a (ENSPEMG00000009695) #22	Zfp526 (ENSPEMG00000000499)	Dedd2 (ENSPEMG00000029729) #23	ENSPEMG00000024366	Pou2f2 (ENSPEMG00000019227) #24	Zfp574 (ENSPEMG00000016061) #26	Grik5 (ENSPEMG00000017219) #27	Atp1a3 (ENSPEMG00000011099) #28	Rabac1 (ENSPEMG00000002744) #29	Erfl (ENSPEMG00000018034) #30	Arhgef1 (ENSPEMG00000012222) #31	Cd79a (ENSPEMG00000015673)	Rps19 (ENSPEMG00000015926)	Dmrtc2 (ENSPEMG00000002536)	Lypd4 (ENSPEMG00000007549)	ENSPEMG00000029955 ##13
Prairie vole	MODERN SPECIES	354	Hnrnpul1 (ENSMOCG00000008200)	Axl (ENSMOCG00000014019)	Cyp2s1 (ENSMOCG00000019209)	ENSMOCG00000002001	ENSMOCG00000017362 ##13	ENSMOCG00000002667 ##13	Cxcl17 (ENSMOCG00000013452) #15	Lipe (ENSMOCG00000004098) #16	Cnfn (ENSMOCG00000010534)	Megf8 (ENSMOCG00000009971) #17	Tmem145 (ENSMOCG00000011577) #18	Prr19 (ENSMOCG00000022197)	Pafah1b3 (ENSMOCG00000011582) #19	Cic (ENSMOCG00000012897) #20	Erf (ENSMOCG00000009581) #21	Gsk3a (ENSMOCG00000013617) #22	Zfp526 (ENSMOCG00000022993)	Dedd2 (ENSMOCG00000017087) #23	Pou2f2 (ENSMOCG00000015602) #24	Zfp574 (ENSMOCG00000016268) #26	Grik5 (ENSMOCG00000001917) #27	Atp1a3 (ENSMOCG00000015750) #28	Rabac1 (ENSMOCG00000002729) #29	ENSMOCG00000011140 #21	Arhgef1 (ENSMOCG00000009746) #31	Rps19 (ENSMOCG00000022408)	Dmrtc2 (ENSMOCG00000018292)	Lypd4 (ENSMOCG00000008530)	ENSMOCG00000015518	Ethe1 (ENSMOCG00000006120)	Zfp575 (ENSMOCG00000017783)
Cricetinae	ANCESTRAL SPECIES	34					ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00390000002861 #15	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.o.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00390000006319
Chinese hamster chok1gshd	MODERN SPECIES	295						Cxcl17 (ENSCGRG00001017481) #15	ENSCGRG00001023649	Lipe (ENSCGRG00001001445) #16	Cnfn (ENSCGRG00001021600)	Megf8 (ENSCGRG00001015887) #17	Tmem145 (ENSCGRG00001023312) #18	Prr19 (ENSCGRG00001013680)	Pafah1b3 (ENSCGRG00001008696) #19	Cic (ENSCGRG00001017203) #20	Erf (ENSCGRG00001022509) #21	Gsk3a (ENSCGRG00001015543) #22	Zfp526 (ENSCGRG00001008967)	Dedd2 (ENSCGRG00001011876) #23	Pou2f2 (ENSCGRG00001013142) #24	Zfp574 (ENSCGRG00001001429) #26	Grik5 (ENSCGRG00001001142) #27	Atp1a3 (ENSCGRG00001010759) #28	Rabac1 (ENSCGRG00001021463) #29	Erfl (ENSCGRG00001017704) #30	Arhgef1 (ENSCGRG00001000673) #31	Cd79a (ENSCGRG00001018881)	ENSCGRG00001017202	Dmrtc2 (ENSCGRG00001016626)	Lypd4 (ENSCGRG00001023965)	Erich4 (ENSCGRG00001023074)	Dmac2 (ENSCGRG00001017864)
Golden Hamster	MODERN SPECIES	863					ENSMAUG00000000868 ##13	Cxcl17 (ENSMAUG00000016706) #15	ENSMAUG00000004744	Lipe (ENSMAUG00000004660) #16	Cnfn (ENSMAUG00000021910)	Megf8 (ENSMAUG00000017117) #17	Tmem145 (ENSMAUG00000012415) #18	Prr19 (ENSMAUG00000005563)	Pafah1b3 (ENSMAUG00000009456) #19	Cic (ENSMAUG00000001079) #20	Erf (ENSMAUG00000008527) #21	Gsk3a (ENSMAUG00000014364) #22	Zfp526 (ENSMAUG00000016121)	Dedd2 (ENSMAUG00000014233) #23	Pou2f2 (ENSMAUG00000010807) #24	Zfp574 (ENSMAUG00000018252) #26	Grik5 (ENSMAUG00000004340) #27	Erfl (ENSMAUG00000020529) #30	Arhgef1 (ENSMAUG00000013887) #31	ENSMAUG00000011201	Dmrtc2 (ENSMAUG00000016876)	Lypd4 (ENSMAUG00000012812)	Cd177 (ENSMAUG00000013142)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.b ##13	ENSGT00530000063351.a.a.z
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.b ##13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00530000063351.b
Naked mole-rat female	MODERN SPECIES	21	EXOSC5 (ENSHGLG00000008975)	BCKDHA (ENSHGLG00000050952)	B3GNT8 (ENSHGLG00000010364)	ERICH4 (ENSHGLG00000048703)	ENSHGLG00000011199 ##13	ENSHGLG00000009638 #15	ATP5SL (ENSHGLG00000039004)	LIPE (ENSHGLG00000002222) #16	CNFN (ENSHGLG00000046457)	MEGF8 (ENSHGLG00000010524) #17	TMEM145 (ENSHGLG00000010011) #18	PRR19 (ENSHGLG00000003163)	PAFAH1B3 (ENSHGLG00000003652) #19	CIC (ENSHGLG00000019229) #20	ERF (ENSHGLG00000003539) #21	GSK3A (ENSHGLG00000004094) #22	ZNF526 (ENSHGLG00000002054)	DEDD2 (ENSHGLG00000002113) #23	POU2F2 (ENSHGLG00000002691) #24	ZNF574 (ENSHGLG00000003903) #26	GRIK5 (ENSHGLG00000004011) #27	ATP1A3 (ENSHGLG00000004227) #28	RABAC1 (ENSHGLG00000006853) #29	ERFL (ENSHGLG00000002910) #30	ARHGEF1 (ENSHGLG00000003059) #31	CD79A (ENSHGLG00000001725)	ENSHGLG00000040845	ENSHGLG00000050295	ENSHGLG00000002035	LYPD4 (ENSHGLG00000002114)	ENSHGLG00000045941
Hystricomorpha_a	ANCESTRAL SPECIES	39	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00530000063351.b
Guinea pig	MODERN SPECIES	80	IDO1 (ENSCPOG00000014771)	ENSCPOG00000015304	ENSCPOG00000008853	ENSCPOG00000030322 ##13	ENSCPOG00000012967	ENSCPOG00000007329 ##13	CXCL17 (ENSCPOG00000039366) #15	LIPE (ENSCPOG00000020887) #16	CNFN (ENSCPOG00000034761)	MEGF8 (ENSCPOG00000012979) #17	TMEM145 (ENSCPOG00000012974) #18	PRR19 (ENSCPOG00000024016)	PAFAH1B3 (ENSCPOG00000004397) #19	CIC (ENSCPOG00000004391) #20	ENSCPOG00000001808 #21	GSK3A (ENSCPOG00000026896) #22	ZNF526 (ENSCPOG00000034474)	DEDD2 (ENSCPOG00000019827) #23	POU2F2 (ENSCPOG00000000781) #24	ZNF574 (ENSCPOG00000000780) #26	GRIK5 (ENSCPOG00000018909) #27	ATP1A3 (ENSCPOG00000010576) #28	RABAC1 (ENSCPOG00000021982) #29	ENSCPOG00000031488 #31	ENSCPOG00000034092 #31	CD79A (ENSCPOG00000011889)	RPS19 (ENSCPOG00000025140)	DMRTC2 (ENSCPOG00000001805)	LYPD4 (ENSCPOG00000001804)	ENSCPOG00000030020	TEX101 (ENSCPOG00000000483)
Hystricomorpha_b	ANCESTRAL SPECIES	49	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a.z	ENSGT00530000063351.b
Long-tailed chinchilla	MODERN SPECIES	262	EXOSC5 (ENSCLAG00000001186)	BCKDHA (ENSCLAG00000000736)	B3GNT8 (ENSCLAG00000001017)	DMAC2 (ENSCLAG00000001090)	ERICH4 (ENSCLAG00000000843)	ENSCLAG00000001267 #13	CXCL17 (ENSCLAG00000001312) #15	LIPE (ENSCLAG00000001355) #16	CNFN (ENSCLAG00000001511)	MEGF8 (ENSCLAG00000002648) #17	TMEM145 (ENSCLAG00000003087) #18	PRR19 (ENSCLAG00000000685)	PAFAH1B3 (ENSCLAG00000000723) #19	CIC (ENSCLAG00000000862) #20	ERF (ENSCLAG00000002511) #21	GSK3A (ENSCLAG00000002825) #22	ZNF526 (ENSCLAG00000002951)	DEDD2 (ENSCLAG00000002983) #23	POU2F2 (ENSCLAG00000004593) #24	ZNF574 (ENSCLAG00000006252) #26	GRIK5 (ENSCLAG00000006835) #27	ATP1A3 (ENSCLAG00000001351) #28	RABAC1 (ENSCLAG00000001671) #29	ERFL (ENSCLAG00000001752) #30	ENSCLAG00000001895 #31	CD79A (ENSCLAG00000001020)	RPS19 (ENSCLAG00000001110)	DMRTC2 (ENSCLAG00000001131)	LYPD4 (ENSCLAG00000001144)	TEX101 (ENSCLAG00000001178)	ENSCLAG00000001219
Degu	MODERN SPECIES	238				ENSODEG00000010092 ##13	ENSODEG00000010781 ##13	ENSODEG00000019766	CXCL17 (ENSODEG00000010054) #15	LIPE (ENSODEG00000009773) #16	CNFN (ENSODEG00000010917)	MEGF8 (ENSODEG00000010413) #17	TMEM145 (ENSODEG00000010150) #18	PRR19 (ENSODEG00000009341)	PAFAH1B3 (ENSODEG00000011390) #19	CIC (ENSODEG00000011664) #20	ERF (ENSODEG00000009178) #21	GSK3A (ENSODEG00000014312) #22	ZNF526 (ENSODEG00000019954)	DEDD2 (ENSODEG00000010982) #23	POU2F2 (ENSODEG00000011310) #24	ZNF574 (ENSODEG00000013318) #26	GRIK5 (ENSODEG00000012165) #27	ATP1A3 (ENSODEG00000009220) #28	RABAC1 (ENSODEG00000008871) #29	ERFL (ENSODEG00000009283) #30	ARHGEF1 (ENSODEG00000009700) #31	CD79A (ENSODEG00000009588)	RPS19 (ENSODEG00000009249)	DMRTC2 (ENSODEG00000009170)	LYPD4 (ENSODEG00000009945)	ENSODEG00000009641	ENSODEG00000009652
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.b.a ##13	ENSGT00530000063351.a.a.z
Eurasian red squirrel	MODERN SPECIES	8	DMAC2 (ENSSVLG00005023559)	ERICH4 (ENSSVLG00005023663)	ENSSVLG00005023751 ##13	ENSSVLG00005024022	ENSSVLG00005024078 ##13	CXCL17 (ENSSVLG00005024192) #15	ENSSVLG00005024214	LIPE (ENSSVLG00005024237) #16	CNFN (ENSSVLG00005024319)	MEGF8 (ENSSVLG00005024356) #17	TMEM145 (ENSSVLG00005024411) #18	PRR19 (ENSSVLG00005024445)	PAFAH1B3 (ENSSVLG00005024469) #19	CIC (ENSSVLG00005024515) #20	ERF (ENSSVLG00005024686) #21	GSK3A (ENSSVLG00005024717) #22	ZNF526 (ENSSVLG00005024751)	DEDD2 (ENSSVLG00005024774) #23	POU2F2 (ENSSVLG00005024957) #24	ZNF574 (ENSSVLG00005025008) #26	GRIK5 (ENSSVLG00005025036) #27	ATP1A3 (ENSSVLG00005025087) #28	RABAC1 (ENSSVLG00005025214) #29	ERFL (ENSSVLG00005025238) #30	ARHGEF1 (ENSSVLG00005025285) #31	CD79A (ENSSVLG00005025331)	RPS19 (ENSSVLG00005025346)	DMRTC2 (ENSSVLG00005025370)	LYPD4 (ENSSVLG00005025397)	ENSSVLG00005025430 ##13	CD177 (ENSSVLG00005025475)
Marmotini	ANCESTRAL SPECIES	7	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.c.b.b.b ##13	ENSGT01100000263479.D.a.c.b.a.b ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.b.a ##13	ENSGT00530000063351.a.a.z
Alpin marmot	MODERN SPECIES	45	ERICH4 (ENSMMMG00000019627)	ENSMMMG00000019076 ##13	ENSMMMG00000018966 ##13	CXCL17 (ENSMMMG00000018960) #15	ENSMMMG00000018958	ENSMMMG00000018948	LIPE (ENSMMMG00000018935) #16	CNFN (ENSMMMG00000018928)	MEGF8 (ENSMMMG00000018897) #17	TMEM145 (ENSMMMG00000018870) #18	ENSMMMG00000018865	PRR19 (ENSMMMG00000018862)	PAFAH1B3 (ENSMMMG00000018822) #19	CIC (ENSMMMG00000018746) #20	ERF (ENSMMMG00000018735) #21	GSK3A (ENSMMMG00000018714) #22	ZNF526 (ENSMMMG00000018710)	DEDD2 (ENSMMMG00000018702) #23	POU2F2 (ENSMMMG00000018186) #24	ZNF574 (ENSMMMG00000018163) #26	GRIK5 (ENSMMMG00000018145) #27	ATP1A3 (ENSMMMG00000018094) #28	RABAC1 (ENSMMMG00000018088) #29	ERFL (ENSMMMG00000018083) #30	ARHGEF1 (ENSMMMG00000016411) #31	CD79A (ENSMMMG00000016388)	RPS19 (ENSMMMG00000016380)	DMRTC2 (ENSMMMG00000016375)	LYPD4 (ENSMMMG00000016374)	ENSMMMG00000016289 ##13	CD177 (ENSMMMG00000016255)
Marmotini_b	ANCESTRAL SPECIES	49				ENSGT01100000263479.D.a.c.b.a.a ##13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.c.b.b.a ##13	ENSGT00530000063351.a.a.z
Squirrel	MODERN SPECIES	306							CXCL17 (ENSSTOG00000011599) #15	Lipe (ENSSTOG00000011564) #16	CNFN (ENSSTOG00000020414)	MEGF8 (ENSSTOG00000000868) #17	TMEM145 (ENSSTOG00000022861) #18	PRR19 (ENSSTOG00000024823)	PAFAH1B3 (ENSSTOG00000000864) #19	CIC (ENSSTOG00000000852) #20	ERF (ENSSTOG00000000849) #21	GSK3A (ENSSTOG00000000841) #22	ZNF526 (ENSSTOG00000019390)	DEDD2 (ENSSTOG00000020972) #23	POU2F2 (ENSSTOG00000021390) #24	ZNF574 (ENSSTOG00000028612) #26	GRIK5 (ENSSTOG00000011995) #27	ATP1A3 (ENSSTOG00000004030) #28	RABAC1 (ENSSTOG00000022795) #29	ENSSTOG00000032462 #21	ARHGEF1 (ENSSTOG00000003526) #31	CD79A (ENSSTOG00000003518)	ENSSTOG00000003502	DMRTC2 (ENSSTOG00000003484)	LYPD3 (ENSSTOG00000003599)	ENSSTOG00000028708	ETHE1 (ENSSTOG00000023958)
Arctic ground squirrel	MODERN SPECIES	297				ENSUPAG00010001516 ##13	CXCL17 (ENSUPAG00010001506) #15	ENSUPAG00010001502	ENSUPAG00010001487	LIPE (ENSUPAG00010001422) #16	CNFN (ENSUPAG00010001399)	MEGF8 (ENSUPAG00010001326) #17	TMEM145 (ENSUPAG00010001258) #18	PRR19 (ENSUPAG00010001251)	PAFAH1B3 (ENSUPAG00010001213) #19	CIC (ENSUPAG00010000939) #20	ERF (ENSUPAG00010000918) #21	GSK3A (ENSUPAG00010000883) #22	ZNF526 (ENSUPAG00010000881)	DEDD2 (ENSUPAG00010000870) #23	POU2F2 (ENSUPAG00010000238) #24	ZNF574 (ENSUPAG00010000222) #26	GRIK5 (ENSUPAG00010000202) #27	ATP1A3 (ENSUPAG00010000095) #28	RABAC1 (ENSUPAG00010000053) #29	ERFL (ENSUPAG00010021971) #30	ARHGEF1 (ENSUPAG00010021957) #31	CD79A (ENSUPAG00010021954)	RPS19 (ENSUPAG00010021947)	DMRTC2 (ENSUPAG00010021944)	LYPD4 (ENSUPAG00010021943)	ENSUPAG00010021938 ##13	ENSUPAG00010021937
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.a.c.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b #13	ENSGT00530000063351.a.a
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01030000237327	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b #13	ENSGT00390000002861 #15
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.b.a #13	ENSGT01030000237327	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00980000198994	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.b.b.b #13	ENSGT01100000263479.D.a.b.b #13
Carnivora	ANCESTRAL SPECIES	2	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.a.b #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.b.b.a #13	ENSGT01100000263479.D.a.b.a.b.a.a #13
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000153599.B.a	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.b.a.b.a.a #13	ENSGT01100000263479.D.a.b.a.b.a.b.a #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.b #13	ENSGT00390000006319
Canidae	ANCESTRAL SPECIES	5	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.a #13	ENSGT01100000263479.D.a.b.a.b.a.b.a.a #13	ENSGT01100000263479.D.a.b.a.b.a.b.b.a.b #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.o #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.b #13	ENSGT00390000006319
Canis_lupus	ANCESTRAL SPECIES		ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.a #13	ENSGT01100000263479.D.a.b.a.b.a.b.a.a #13	ENSGT01100000263479.D.a.b.a.b.a.b.b.a.b #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.o #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.a	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.b.b.a.b #13	ENSGT00390000006319
Dog	MODERN SPECIES		PHLDB3 (ENSCAFG00845000239)	LYPD3 (ENSCAFG00845000436)	TEX101 (ENSCAFG00845000460)	ENSCAFG00845000474	CEACAM1 (ENSCAFG00845000573) #13	ENSCAFG00845000701 #15	ENSCAFG00845000713	LIPE (ENSCAFG00845000721) #16	CNFN (ENSCAFG00845000749)	ENSCAFG00845000769 #17	PAFAH1B3 (ENSCAFG00845000778) #19	TMEM145 (ENSCAFG00845000809) #18	PRR19 (ENSCAFG00845000828)	CIC (ENSCAFG00845000846) #20	ERF (ENSCAFG00845000876) #21	GSK3A (ENSCAFG00845000891) #22	ZNF526 (ENSCAFG00845000921)	DEDD2 (ENSCAFG00845000934) #23	POU2F2 (ENSCAFG00845000999) #24	ZNF574 (ENSCAFG00845001108) #26	GRIK5 (ENSCAFG00845001140) #27	ATP1A3 (ENSCAFG00845001235) #28	RABAC1 (ENSCAFG00845001408) #29	ERFL (ENSCAFG00845001434) #30	ARHGEF1 (ENSCAFG00845001568) #31	CD79A (ENSCAFG00845001724)	RPS19 (ENSCAFG00845001758)	DMRTC2 (ENSCAFG00845001796)	LYPD4 (ENSCAFG00845001833)	ENSCAFG00845002010 #13	ERICH4 (ENSCAFG00845002158)
Dingo	MODERN SPECIES	125	CD177 (ENSCAFG00020014056)	ENSCAFG00020014071 #13	ENSCAFG00020014074 #13	ENSCAFG00020014079 #13	ENSCAFG00020014081 #13	ENSCAFG00020014093 #13	ENSCAFG00020014150 #15	LIPE (ENSCAFG00020014155) #16	CNFN (ENSCAFG00020014171)	MEGF8 (ENSCAFG00020014183) #17	TMEM145 (ENSCAFG00020014279) #18	PRR19 (ENSCAFG00020014335)	ENSCAFG00020014336 #19	CIC (ENSCAFG00020014340) #20	ERF (ENSCAFG00020014347) #21	GSK3A (ENSCAFG00020014351) #22	ZNF526 (ENSCAFG00020014510)	DEDD2 (ENSCAFG00020014511) #23	POU2F2 (ENSCAFG00020014519) #24	ZNF574 (ENSCAFG00020014558) #26	GRIK5 (ENSCAFG00020014562) #27	ATP1A3 (ENSCAFG00020014636) #28	RABAC1 (ENSCAFG00020014693) #29	ENSCAFG00020014701 #21	ARHGEF1 (ENSCAFG00020014703) #31	CD79A (ENSCAFG00020014709)	ENSCAFG00020014712	DMRTC2 (ENSCAFG00020014713)	LYPD4 (ENSCAFG00020014716)	ENSCAFG00020014727 #13	ERICH4 (ENSCAFG00020014765)
Red fox	MODERN SPECIES	101	ENSVVUG00000009078 #13	ENSVVUG00000009089 #13	ENSVVUG00000009099	ENSVVUG00000009101 #13	ENSVVUG00000009105	ENSVVUG00000009110 #13	ENSVVUG00000009145	ENSVVUG00000009150	LIPE (ENSVVUG00000009152) #16	CNFN (ENSVVUG00000009163)	MEGF8 (ENSVVUG00000009173) #17	TMEM145 (ENSVVUG00000009304) #18	PAFAH1B3 (ENSVVUG00000009493) #19	CIC (ENSVVUG00000009518) #20	ERF (ENSVVUG00000009590) #21	GSK3A (ENSVVUG00000009613) #22	ZNF526 (ENSVVUG00000009982)	DEDD2 (ENSVVUG00000009984) #23	POU2F2 (ENSVVUG00000010002) #24	ZNF574 (ENSVVUG00000010354) #26	GRIK5 (ENSVVUG00000010369) #27	ATP1A3 (ENSVVUG00000010594) #28	RABAC1 (ENSVVUG00000010606) #29	ENSVVUG00000010610 #21	ARHGEF1 (ENSVVUG00000010615) #31	CD79A (ENSVVUG00000010632)	RPS19 (ENSVVUG00000010652)	DMRTC2 (ENSVVUG00000010656)	LYPD4 (ENSVVUG00000010671)	ENSVVUG00000010707 #13	ENSVVUG00000010980 #13
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.b.a #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.b #13	ENSGT01100000263479.D.a.b.a.b.a.a #13
Mustelinae	ANCESTRAL SPECIES	7										ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.b.c #13	ENSGT00530000063351.a.a
American mink	MODERN SPECIES	385										ENSNVIG00000024583 #17	TMEM145 (ENSNVIG00000024588) #18	PRR19 (ENSNVIG00000024589)	ENSNVIG00000024590 #19	CIC (ENSNVIG00000024591) #20	ERF (ENSNVIG00000024592) #21	GSK3A (ENSNVIG00000024594) #22	ZNF526 (ENSNVIG00000024596)	DEDD2 (ENSNVIG00000024597) #23	POU2F2 (ENSNVIG00000024599) #24	ZNF574 (ENSNVIG00000024603) #26	GRIK5 (ENSNVIG00000024604) #27	ATP1A3 (ENSNVIG00000024605) #28	RABAC1 (ENSNVIG00000024607) #29	ERFL (ENSNVIG00000024608) #30	ARHGEF1 (ENSNVIG00000024617) #31	CD79A (ENSNVIG00000024643)	RPS19 (ENSNVIG00000024644)	DMRTC2 (ENSNVIG00000024645)	LYPD4 (ENSNVIG00000024646)	ENSNVIG00000024647 #13	ENSNVIG00000024650 #13
Ferret	MODERN SPECIES	291										MEGF8 (ENSMPUG00000007646) #17	TMEM145 (ENSMPUG00000007588) #18	PRR19 (ENSMPUG00000007582)	PAFAH1B3 (ENSMPUG00000007574) #19	CIC (ENSMPUG00000007557) #20	ERF (ENSMPUG00000007551) #21	GSK3A (ENSMPUG00000007543) #22	ZNF526 (ENSMPUG00000019384)	DEDD2 (ENSMPUG00000007534) #23	POU2F2 (ENSMPUG00000007374) #24	ENSMPUG00000019382	ZNF574 (ENSMPUG00000007369) #26	GRIK5 (ENSMPUG00000007345) #27	ATP1A3 (ENSMPUG00000007324) #28	RABAC1 (ENSMPUG00000007273) #29	ERFL (ENSMPUG00000007268) #30	ARHGEF1 (ENSMPUG00000007235) #31	CD79A (ENSMPUG00000007182)	RPS19 (ENSMPUG00000007164)	DMRTC2 (ENSMPUG00000007147)	LYPD4 (ENSMPUG00000007126)	ENSMPUG00000007009 #13
Ursidae	ANCESTRAL SPECIES	30						ENSGT01100000263479.D.a.b.a.b.b.a.a.a.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549.d #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.b.b.b.b #13	ENSGT01100000263479.D.a.b.a.b.a.a #13
Ursus	ANCESTRAL SPECIES	176						ENSGT01100000263479.D.a.b.a.b.b.a.a.a.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549.d #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.b.b.b.b #13	ENSGT01100000263479.D.a.b.a.b.a.b.a #13	ENSGT01100000263479.E.h ##13
Polar bear	MODERN SPECIES	344								ENSUMAG00000001896 #13	ENSUMAG00000001923	CXCL17 (ENSUMAG00000001950) #15	LIPE (ENSUMAG00000001964) #16	PRR19 (ENSUMAG00000002248)	PAFAH1B3 (ENSUMAG00000002255) #19	CIC (ENSUMAG00000002268) #20	ENSUMAG00000002396 #21	GSK3A (ENSUMAG00000002409) #22	DEDD2 (ENSUMAG00000002619) #23	POU2F2 (ENSUMAG00000002647) #24	ZNF574 (ENSUMAG00000002662) #26	GRIK5 (ENSUMAG00000002670) #27	ENSUMAG00000002742 #28	ENSUMAG00000002749 #29	ENSUMAG00000002753 #21	ARHGEF1 (ENSUMAG00000002856) #31	CD79A (ENSUMAG00000003839)	RPS19 (ENSUMAG00000003843)	DMRTC2 (ENSUMAG00000003849)	LYPD4 (ENSUMAG00000003866)	ENSUMAG00000003880 #13	ENSUMAG00000003897 #13	ENSUMAG00000003921 ##13
American black bear	MODERN SPECIES	1978															ERF (ENSUAMG00000012226) #21	GSK3A (ENSUAMG00000011821) #22	ZNF526 (ENSUAMG00000011794)	DEDD2 (ENSUAMG00000011790) #23	POU2F2 (ENSUAMG00000011600) #24
Giant Panda	MODERN SPECIES	3	ENSAMEG00000006129	ENSAMEG00000026533	ENSAMEG00000027844	ENSAMEG00000006137	ENSAMEG00000006141	ENSAMEG00000026212 #13	ENSAMEG00000005003 #15	LIPE (ENSAMEG00000004975) #16	CNFN (ENSAMEG00000004972)	MEGF8 (ENSAMEG00000028618) #17	TMEM145 (ENSAMEG00000004959) #18	PRR19 (ENSAMEG00000004957)	PAFAH1B3 (ENSAMEG00000031198) #19	CIC (ENSAMEG00000029555) #20	ERF (ENSAMEG00000004880) #21	GSK3A (ENSAMEG00000026734) #22	ZNF526 (ENSAMEG00000025331)	DEDD2 (ENSAMEG00000026014) #23	POU2F2 (ENSAMEG00000004811) #24	ZNF574 (ENSAMEG00000020255) #26	GRIK5 (ENSAMEG00000004677) #27	ATP1A3 (ENSAMEG00000004573) #28	RABAC1 (ENSAMEG00000029836) #29	ERFL (ENSAMEG00000004554) #30	ARHGEF1 (ENSAMEG00000004495) #31	CD79A (ENSAMEG00000004479)	RPS19 (ENSAMEG00000004456)	DMRTC2 (ENSAMEG00000004439)	ENSAMEG00000004433	ENSAMEG00000005005 #13	ENSAMEG00000028854 #13
Felidae	ANCESTRAL SPECIES	7	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.a.b.d #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.n #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.c #13	ENSGT01100000263479.D.a.b.a.b.a.a #13
Panthera	ANCESTRAL SPECIES	20	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.a.b.d #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.n #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a.b.c #13	ENSGT01100000263479.D.a.b.a.b.a.a #13
Tiger	MODERN SPECIES	246	TMEM91 (ENSPTIG00000014938)	EXOSC5 (ENSPTIG00000015884)	BCKDHA (ENSPTIG00000017890)	DMAC2 (ENSPTIG00000019804)	ERICH4 (ENSPTIG00000006672)	ENSPTIG00000007025 #13	CXCL17 (ENSPTIG00000008290) #15	LIPE (ENSPTIG00000008874) #16	ENSPTIG00000011269	MEGF8 (ENSPTIG00000011829) #17	TMEM145 (ENSPTIG00000018901) #18	PRR19 (ENSPTIG00000007221)	PAFAH1B3 (ENSPTIG00000008030) #19	CIC (ENSPTIG00000008996) #20	ERF (ENSPTIG00000013584) #21	GSK3A (ENSPTIG00000014636) #22	ZNF526 (ENSPTIG00000016033)	DEDD2 (ENSPTIG00000016247) #23	ZNF574 (ENSPTIG00000006879) #26	GRIK5 (ENSPTIG00000019069) #27	ATP1A3 (ENSPTIG00000004401) #28	ENSPTIG00000014231 #29	ERFL (ENSPTIG00000014623) #30	ARHGEF1 (ENSPTIG00000016034) #31	ENSPTIG00000006521	DMRTC2 (ENSPTIG00000009674)	LYPD4 (ENSPTIG00000011907)	ENSPTIG00000012854 #13	ENSPTIG00000015110 #13	CD177 (ENSPTIG00000018687)	TEX101 (ENSPTIG00000019997)
Panthera_a	ANCESTRAL SPECIES	22	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.a.b.a.b.d #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b.n #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a	ENSGT00530000063351.b
leopard	MODERN SPECIES	165	BCKDHA (ENSPPRG00000003740)	ENSPPRG00000011743	ENSPPRG00000011744	DMAC2 (ENSPPRG00000003894)	ERICH4 (ENSPPRG00000003928)	ENSPPRG00000004013	ENSPPRG00000004091 #13	CXCL17 (ENSPPRG00000004116) #15	LIPE (ENSPPRG00000004305) #16	CNFN (ENSPPRG00000004339)	MEGF8 (ENSPPRG00000004589) #17	TMEM145 (ENSPPRG00000004698) #18	PRR19 (ENSPPRG00000004728)	PAFAH1B3 (ENSPPRG00000004745) #19	CIC (ENSPPRG00000004914) #20	GSK3A (ENSPPRG00000005007) #22	ERF (ENSPPRG00000005019) #21	ZNF526 (ENSPPRG00000007308)	DEDD2 (ENSPPRG00000007326) #23	POU2F2 (ENSPPRG00000007803) #24	ZNF574 (ENSPPRG00000011771) #26	GRIK5 (ENSPPRG00000007924) #27	ATP1A3 (ENSPPRG00000008238) #28	RABAC1 (ENSPPRG00000008295) #29	ERFL (ENSPPRG00000008331) #30	ARHGEF1 (ENSPPRG00000008642) #31	CD79A (ENSPPRG00000008704)	RPS19 (ENSPPRG00000008756)	DMRTC2 (ENSPPRG00000008914)	LYPD4 (ENSPPRG00000009032)	ENSPPRG00000009499 #13
lion	MODERN SPECIES	15	BCKDHA (ENSPLOG00000006715)	B3GNT8 (ENSPLOG00000006750)	DMAC2 (ENSPLOG00000006789)	ENSPLOG00000006846	ENSPLOG00000006902 #13	CXCL17 (ENSPLOG00000007022) #15	ENSPLOG00000007035	LIPE (ENSPLOG00000007057) #16	CNFN (ENSPLOG00000007085)	ENSPLOG00000007105 #17	TMEM145 (ENSPLOG00000007245) #18	PRR19 (ENSPLOG00000007462)	PAFAH1B3 (ENSPLOG00000007480) #19	CIC (ENSPLOG00000007521) #20	ERF (ENSPLOG00000007581) #21	GSK3A (ENSPLOG00000007615) #22	ZNF526 (ENSPLOG00000007664)	DEDD2 (ENSPLOG00000007677) #23	POU2F2 (ENSPLOG00000007798) #24	ZNF574 (ENSPLOG00000008426) #26	GRIK5 (ENSPLOG00000008447) #27	ATP1A3 (ENSPLOG00000008601) #28	RABAC1 (ENSPLOG00000009062) #29	ERFL (ENSPLOG00000009162) #30	ARHGEF1 (ENSPLOG00000009304) #31	CD79A (ENSPLOG00000009705)	RPS19 (ENSPLOG00000009766)	DMRTC2 (ENSPLOG00000009804)	LYPD4 (ENSPLOG00000009823)	CD177 (ENSPLOG00000009857)	TEX101 (ENSPLOG00000009902)
Cat	MODERN SPECIES	246	BCKDHA (ENSFCAG00000005438)	B3GNT8 (ENSFCAG00000005440)	DMAC2 (ENSFCAG00000002361)	ERICH4 (ENSFCAG00000009918)	ENSFCAG00000003035 #13	CXCL17 (ENSFCAG00000040968) #15	ENSFCAG00000053328	LIPE (ENSFCAG00000022678) #16	CNFN (ENSFCAG00000012749)	MEGF8 (ENSFCAG00000012745) #17	TMEM145 (ENSFCAG00000012742) #18	PRR19 (ENSFCAG00000012741)	PAFAH1B3 (ENSFCAG00000003598) #19	CIC (ENSFCAG00000012737) #20	ERF (ENSFCAG00000030101) #21	GSK3A (ENSFCAG00000030846) #22	ZNF526 (ENSFCAG00000022743)	DEDD2 (ENSFCAG00000012732) #23	POU2F2 (ENSFCAG00000012731) #24	ZNF574 (ENSFCAG00000022250) #26	GRIK5 (ENSFCAG00000012730) #27	ATP1A3 (ENSFCAG00000012729) #28	RABAC1 (ENSFCAG00000024180) #29	ERFL (ENSFCAG00000035386) #30	ARHGEF1 (ENSFCAG00000008128) #31	CD79A (ENSFCAG00000008129)	DMRTC2 (ENSFCAG00000008126)	LYPD4 (ENSFCAG00000004845)	ENSFCAG00000042962 #13	CD177 (ENSFCAG00000039801)	TEX101 (ENSFCAG00000007160)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT00730000111056 #16	ENSGT00980000198994	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.a.b.a #13	ENSGT00390000002861 #15
Equus	ANCESTRAL SPECIES	1	ENSGT01100000263479.D.a.b.b.e.a.b.a #13	ENSGT00390000002861.f #15	ENSGT01100000263479.D.a.b.b.e.a.b.b #13	ENSGT01030000237327	ENSGT00730000111056 #16	ENSGT00980000198994	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.a.b.a.a.a #13	ENSGT01100000263479.D.a.b.b.e.a.a.b.a.b #13
Horse	MODERN SPECIES	1	ENSECAG00000020364 #13	LIPE (ENSECAG00000015074) #16	ENSECAG00000031414 #13	ENSECAG00000052245 #13	ENSECAG00000047722	CXCL17 (ENSECAG00000000790) #15	ENSECAG00000009042 #13	ENSECAG00000039720	ENSECAG00000032940	MEGF8 (ENSECAG00000019381) #17	CNFN (ENSECAG00000017130)	TMEM145 (ENSECAG00000000962) #18	PRR19 (ENSECAG00000010956)	CIC (ENSECAG00000011342) #20	ERF (ENSECAG00000018426) #21	GSK3A (ENSECAG00000019484) #22	ZNF526 (ENSECAG00000003502)	DEDD2 (ENSECAG00000003772) #23	POU2F2 (ENSECAG00000004906) #24	ZNF574 (ENSECAG00000005773) #26	GRIK5 (ENSECAG00000018739) #27	ATP1A3 (ENSECAG00000024155) #28	RABAC1 (ENSECAG00000006670) #29	ARHGEF1 (ENSECAG00000035888) #31	LYPD4 (ENSECAG00000019163)	CD79A (ENSECAG00000007198)	RPS19 (ENSECAG00000009738)	DMRTC2 (ENSECAG00000018349)	ENSECAG00000019324 #13	ENSECAG00000054958 #13	CXCL17 (ENSECAG00000047201) #15
Donkey	MODERN SPECIES	18	ENSEASG00005038772	ENSEASG00005006278 #15	ENSEASG00005006266 #13	ENSEASG00005032034	LIPE (ENSEASG00005006261) #16	ENSEASG00005006264	CNFN (ENSEASG00005032022)	MEGF8 (ENSEASG00005006253) #17	TMEM145 (ENSEASG00005006250) #18	PRR19 (ENSEASG00005006249)	ENSEASG00005006247	PAFAH1B3 (ENSEASG00005017155) #19	CIC (ENSEASG00005006234) #20	ERF (ENSEASG00005006230) #21	ZNF526 (ENSEASG00005006227)	GSK3A (ENSEASG00005006229) #22	DEDD2 (ENSEASG00005006226) #23	POU2F2 (ENSEASG00005006218) #24	ZNF574 (ENSEASG00005031171) #26	GRIK5 (ENSEASG00005006176) #27	ATP1A3 (ENSEASG00005004546) #28	RABAC1 (ENSEASG00005004293) #29	ERFL (ENSEASG00005004285) #30	ARHGEF1 (ENSEASG00005003557) #31	ENSEASG00005025039	ENSEASG00005003466	DMRTC2 (ENSEASG00005003463)	ENSEASG00005003460	ENSEASG00005006281 #13	ENSEASG00005003449 #13	ENSEASG00005026402 #13
Chiroptera	ANCESTRAL SPECIES	16	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00940000164580	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.b.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.a.a.b #13	ENSGT01100000263479.D.a.b.a.b.a #13
Megabat	MODERN SPECIES	1696											MEGF8 (ENSPVAG00000016809) #17	TMEM145 (ENSPVAG00000016808) #18	PAFAH1B3 (ENSPVAG00000016807) #19	CIC (ENSPVAG00000016806) #20	ERF (ENSPVAG00000016805) #21	GSK3A (ENSPVAG00000016802) #22	DEDD2 (ENSPVAG00000016800) #23
Microchiroptera	ANCESTRAL SPECIES	18	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00940000164580	ENSGT00530000063351.b	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a.b.b #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.a.b.a #13	ENSGT00940000160500
Greater horseshoe bat	MODERN SPECIES	6	ENSRFEG00010019388	TEX101 (ENSRFEG00010019311)	ENSRFEG00010019285	ENSRFEG00010018708 #13	ENSRFEG00010018459 #13	ENSRFEG00010018437	CXCL17 (ENSRFEG00010018405) #15	LIPE (ENSRFEG00010018364) #16	CNFN (ENSRFEG00010018318)	MEGF8 (ENSRFEG00010018262) #17	TMEM145 (ENSRFEG00010018204) #18	PRR19 (ENSRFEG00010018186)	PAFAH1B3 (ENSRFEG00010018154) #19	CIC (ENSRFEG00010017983) #20	ERF (ENSRFEG00010017899) #21	GSK3A (ENSRFEG00010017776) #22	ZNF526 (ENSRFEG00010017756)	DEDD2 (ENSRFEG00010017687) #23	POU2F2 (ENSRFEG00010017530) #24	ZNF574 (ENSRFEG00010017506) #26	GRIK5 (ENSRFEG00010017406) #27	ATP1A3 (ENSRFEG00010017150) #28	RABAC1 (ENSRFEG00010017020) #29	ERFL (ENSRFEG00010016938) #30	ARHGEF1 (ENSRFEG00010016400) #31	CD79A (ENSRFEG00010016343)	ENSRFEG00010016186	DMRTC2 (ENSRFEG00010016064)	LYPD4 (ENSRFEG00010015914)	ENSRFEG00010015843 #13	DMAC2 (ENSRFEG00010015659)
Microbat	MODERN SPECIES	1427			ENSMLUG00000028603 #13	ENSMLUG00000024374 #13	ENSMLUG00000022800 ##13	CXCL17 (ENSMLUG00000016757) #15	ENSMLUG00000008187	LIPE (ENSMLUG00000016739) #16	CNFN (ENSMLUG00000016735)	MEGF8 (ENSMLUG00000016706) #17	TMEM145 (ENSMLUG00000016682) #18	PRR19 (ENSMLUG00000016675)	PAFAH1B3 (ENSMLUG00000016667) #19	CIC (ENSMLUG00000016650) #20	ERF (ENSMLUG00000016639) #21	GSK3A (ENSMLUG00000016622) #22	ZNF526 (ENSMLUG00000016619)	ENSMLUG00000005352	DEDD2 (ENSMLUG00000016612) #23	POU2F2 (ENSMLUG00000014682) #24	ZNF574 (ENSMLUG00000014677) #26	GRIK5 (ENSMLUG00000014661) #27	ATP1A3 (ENSMLUG00000014647) #28	RABAC1 (ENSMLUG00000022885) #29
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b #13	ENSGT00390000002861 #15
Suina	ANCESTRAL SPECIES	2	ENSGT00950000183147.A.b.a	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.a.c.a.b.a #13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00390000002861 #15	ENSGT01100000263479.D.a.b #13
Chacoan peccary	MODERN SPECIES	800															ERF (ENSCWAG00000007418) #21	GSK3A (ENSCWAG00000007462) #22	ZNF526 (ENSCWAG00000007534)	DEDD2 (ENSCWAG00000007541) #23	POU2F2 (ENSCWAG00000007609) #24	ZNF574 (ENSCWAG00000009443) #26	GRIK5 (ENSCWAG00000009477) #27	ATP1A3 (ENSCWAG00000009866) #28	RABAC1 (ENSCWAG00000010344) #29	ERFL (ENSCWAG00000010386) #30	ARHGEF1 (ENSCWAG00000010430) #31	CD79A (ENSCWAG00000010605)	RPS19 (ENSCWAG00000010660)	DMRTC2 (ENSCWAG00000010721)	LYPD4 (ENSCWAG00000010786)	ENSCWAG00000010827 #15	ENSCWAG00000010908 #13
Pig	MODERN SPECIES	14	EXOSC5 (ENSSSCG00000003015)	BCKDHA (ENSSSCG00000028794)	B3GNT8 (ENSSSCG00000032536)	DMAC2 (ENSSSCG00000032711)	ERICH4 (ENSSSCG00000040022)	ENSSSCG00000020837 #13	ENSSSCG00000033133	LIPE (ENSSSCG00000003018) #16	CNFN (ENSSSCG00000027022)	ENSSSCG00000059920 #17	PAFAH1B3 (ENSSSCG00000029070) #19	TMEM145 (ENSSSCG00000003022) #18	PRR19 (ENSSSCG00000003024)	CIC (ENSSSCG00000003030) #20	ERF (ENSSSCG00000032154) #21	GSK3A (ENSSSCG00000003035) #22	ZNF526 (ENSSSCG00000028054)	DEDD2 (ENSSSCG00000030182) #23	POU2F2 (ENSSSCG00000037132) #24	ZNF574 (ENSSSCG00000003037) #26	GRIK5 (ENSSSCG00000003038) #27	ATP1A3 (ENSSSCG00000003045) #28	ENSSSCG00000049078	RABAC1 (ENSSSCG00000003046) #29	ERFL (ENSSSCG00000003049) #30	ARHGEF1 (ENSSSCG00000003040) #31	CD79A (ENSSSCG00000033684)	RPS19 (ENSSSCG00000003042)	LYPD4 (ENSSSCG00000003044)	DMRTC2 (ENSSSCG00000003043)	ENSSSCG00000060817 #13
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00390000002861 #15	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.a.a	ENSGT00530000063351.b
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b #13	ENSGT00390000002861 #15
Cetacea	ANCESTRAL SPECIES	6	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00390000002861 #15	ENSGT00530000063351.a.a
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00390000002861 #15	ENSGT00530000063351.a.a
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00940000171483	ENSGT00990000204044	ENSGT00530000063351.a.a	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00530000063351.b	ENSGT00940000153599.B.a
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00390000002861 #15	ENSGT00530000063351.a.a
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b #13	ENSGT00940000171483	ENSGT00990000204044	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT00390000002861 #15	ENSGT00530000063351.a.a
Narwhal	MODERN SPECIES	296	BCKDHA (ENSMMNG00015003452)	B3GNT8 (ENSMMNG00015003478)	DMAC2 (ENSMMNG00015003502)	ERICH4 (ENSMMNG00015003517)	ENSMMNG00015003530 #13	ENSMMNG00015003542	LIPE (ENSMMNG00015003560) #16	ENSMMNG00015003571	CNFN (ENSMMNG00015003587)	MEGF8 (ENSMMNG00015003617) #17	TMEM145 (ENSMMNG00015003703) #18	PRR19 (ENSMMNG00015003832)	PAFAH1B3 (ENSMMNG00015003845) #19	CIC (ENSMMNG00015003888) #20	ERF (ENSMMNG00015003962) #21	GSK3A (ENSMMNG00015003974) #22	ZNF526 (ENSMMNG00015003997)	DEDD2 (ENSMMNG00015004007) #23	ENSMMNG00015004017	POU2F2 (ENSMMNG00015004037) #24	ZNF574 (ENSMMNG00015004072) #26	GRIK5 (ENSMMNG00015004091) #27	ATP1A3 (ENSMMNG00015004136) #28	RABAC1 (ENSMMNG00015004198) #29	ERFL (ENSMMNG00015004212) #30	ARHGEF1 (ENSMMNG00015004283) #31	CD79A (ENSMMNG00015004388)	ENSMMNG00015004405	DMRTC2 (ENSMMNG00015004432)	LYPD4 (ENSMMNG00015004446)	CXCL17 (ENSMMNG00015005243) #15
Beluga whale	MODERN SPECIES	14	EXOSC5 (ENSDLEG00000004244)	BCKDHA (ENSDLEG00000004236)	B3GNT8 (ENSDLEG00000004233)	DMAC2 (ENSDLEG00000004229)	ERICH4 (ENSDLEG00000004226)	ENSDLEG00000004222 #13	ENSDLEG00000004219	LIPE (ENSDLEG00000002330) #16	CNFN (ENSDLEG00000002318)	MEGF8 (ENSDLEG00000002276) #17	TMEM145 (ENSDLEG00000002254) #18	PRR19 (ENSDLEG00000002248)	PAFAH1B3 (ENSDLEG00000002240) #19	CIC (ENSDLEG00000002223) #20	ERF (ENSDLEG00000002213) #21	GSK3A (ENSDLEG00000002202) #22	ZNF526 (ENSDLEG00000002191)	DEDD2 (ENSDLEG00000002184) #23	ENSDLEG00000002177	POU2F2 (ENSDLEG00000002157) #24	ZNF574 (ENSDLEG00000002144) #26	GRIK5 (ENSDLEG00000002123) #27	ATP1A3 (ENSDLEG00000002099) #28	RABAC1 (ENSDLEG00000002078) #29	ENSDLEG00000002063 #21	ARHGEF1 (ENSDLEG00000002004) #31	CD79A (ENSDLEG00000001982)	RPS19 (ENSDLEG00000001955)	DMRTC2 (ENSDLEG00000001939)	LYPD4 (ENSDLEG00000001925)	CD177 (ENSDLEG00000001902)
Vaquita	MODERN SPECIES	10	EXOSC5 (ENSPSNG00000017550)	BCKDHA (ENSPSNG00000017396)	ENSPSNG00000017313	ERICH4 (ENSPSNG00000017237)	ENSPSNG00000017162 #13	ENSPSNG00000017125	ENSPSNG00000017088	ENSPSNG00000017051	LIPE (ENSPSNG00000017024) #16	CNFN (ENSPSNG00000016978)	ENSPSNG00000016933 #17	TMEM145 (ENSPSNG00000016852) #18	PAFAH1B3 (ENSPSNG00000016663) #19	CIC (ENSPSNG00000016537) #20	ERF (ENSPSNG00000016478) #21	GSK3A (ENSPSNG00000016329) #22	ZNF526 (ENSPSNG00000016306)	DEDD2 (ENSPSNG00000016228) #23	ENSPSNG00000016173	POU2F2 (ENSPSNG00000014981) #24	ZNF574 (ENSPSNG00000014863) #26	GRIK5 (ENSPSNG00000014767) #27	ATP1A3 (ENSPSNG00000013902) #28	ENSPSNG00000013664 #21	ARHGEF1 (ENSPSNG00000013433) #31	CD79A (ENSPSNG00000013274)	ENSPSNG00000013157	DMRTC2 (ENSPSNG00000013013)	LYPD4 (ENSPSNG00000012952)	CXCL17 (ENSPSNG00000012891) #15	CD177 (ENSPSNG00000013918)
Dolphin	MODERN SPECIES	2278															ERF (ENSTTRG00000008340) #21	GSK3A (ENSTTRG00000008338) #22	ZNF526 (ENSTTRG00000008336)	DEDD2 (ENSTTRG00000008333) #23	POU2F2 (ENSTTRG00000008331) #24	ZNF574 (ENSTTRG00000008326) #26	GRIK5 (ENSTTRG00000008314) #27	ATP1A3 (ENSTTRG00000008308) #28	RABAC1 (ENSTTRG00000008302) #29	ARHGEF1 (ENSTTRG00000008288) #31	CD79A (ENSTTRG00000008284)	RPS19 (ENSTTRG00000008278)	DMRTC2 (ENSTTRG00000008270)	LYPD4 (ENSTTRG00000008264)
Sperm whale	MODERN SPECIES	8	ENSPCTG00005006668	ENSPCTG00005006654	B3GNT8 (ENSPCTG00005006644)	BCKDHA (ENSPCTG00005006616)	ENSPCTG00005006591 #13	ENSPCTG00005006569 #13	ENSPCTG00005006540	LIPE (ENSPCTG00005006526) #16	ENSPCTG00005006495	ENSPCTG00005006481 #17	TMEM145 (ENSPCTG00005006442) #18	PRR19 (ENSPCTG00005006423)	PAFAH1B3 (ENSPCTG00005006406) #19	CIC (ENSPCTG00005006286) #20	ERF (ENSPCTG00005006251) #21	GSK3A (ENSPCTG00005006203) #22	ZNF526 (ENSPCTG00005006185)	DEDD2 (ENSPCTG00005006152) #23	POU2F2 (ENSPCTG00005005510) #24	ERFL (ENSPCTG00005005455) #30	ARHGEF1 (ENSPCTG00005005237) #31	CD79A (ENSPCTG00005005160)	ENSPCTG00005005137	DMRTC2 (ENSPCTG00005005088)	LYPD4 (ENSPCTG00005005055)	CXCL17 (ENSPCTG00005005031) #15	ENSPCTG00005005018	ENSPCTG00005004989	TEX101 (ENSPCTG00005004954)	ENSPCTG00005004915	LYPD3 (ENSPCTG00005004886)
Blue whale	MODERN SPECIES	10	BCKDHA (ENSBMSG00010017121)	B3GNT8 (ENSBMSG00010017104)	DMAC2 (ENSBMSG00010016906)	ERICH4 (ENSBMSG00010016823)	ENSBMSG00010016795	ENSBMSG00010016729 #13	ENSBMSG00010016682	LIPE (ENSBMSG00010016630) #16	CNFN (ENSBMSG00010016586)	ENSBMSG00010016564 #17	TMEM145 (ENSBMSG00010016521) #18	PRR19 (ENSBMSG00010016489)	PAFAH1B3 (ENSBMSG00010016458) #19	CIC (ENSBMSG00010016308) #20	ERF (ENSBMSG00010016255) #21	GSK3A (ENSBMSG00010016150) #22	ZNF526 (ENSBMSG00010016129)	DEDD2 (ENSBMSG00010016093) #23	POU2F2 (ENSBMSG00010014278) #24	ZNF574 (ENSBMSG00010014041) #26	GRIK5 (ENSBMSG00010020158) #27	ATP1A3 (ENSBMSG00010020043) #28	RABAC1 (ENSBMSG00010020001) #29	ERFL (ENSBMSG00010019977) #30	ARHGEF1 (ENSBMSG00010019827) #31	CD79A (ENSBMSG00010019729)	ENSBMSG00010019694	DMRTC2 (ENSBMSG00010019663)	LYPD4 (ENSBMSG00010019644)	ENSBMSG00010019623	CXCL17 (ENSBMSG00010019606) #15
Pecora	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT00390000002861 #15
Yarkand deer	MODERN SPECIES	27	TGFB1 (ENSCHYG00000027180)	B9D2 (ENSCHYG00000027181)	BCKDHA (ENSCHYG00000027182)	ENSCHYG00000027183	B3GNT8 (ENSCHYG00000027184)	DMAC2 (ENSCHYG00000027185)	ERICH4 (ENSCHYG00000000043)	LIPE (ENSCHYG00000000071) #16	CNFN (ENSCHYG00000000115)	MEGF8 (ENSCHYG00000000158) #17	TMEM145 (ENSCHYG00000000283) #18	PRR19 (ENSCHYG00000000321)	PAFAH1B3 (ENSCHYG00000000329) #19	CIC (ENSCHYG00000000355) #20	ERF (ENSCHYG00000000404) #21	GSK3A (ENSCHYG00000000417) #22	ZNF526 (ENSCHYG00000000435)	DEDD2 (ENSCHYG00000000451) #23	ENSCHYG00000000500 #24	ZNF574 (ENSCHYG00000000579) #26	GRIK5 (ENSCHYG00000000596) #27	ATP1A3 (ENSCHYG00000000627) #28	ENSCHYG00000000702 #29	ERFL (ENSCHYG00000000737) #30	ARHGEF1 (ENSCHYG00000000815) #31	CD79A (ENSCHYG00000001084)	ENSCHYG00000001110	DMRTC2 (ENSCHYG00000001132)	LYPD4 (ENSCHYG00000001152)	ENSCHYG00000001179 #13	CXCL17 (ENSCHYG00000001218) #15
Percora_a	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.g #13
Bovidae	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.a.a.a #13	ENSGT01100000263479.D.a.b.h.a.a.a.b #13
Bovinae	ANCESTRAL SPECIES	3	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.h.b #13
Bos	ANCESTRAL SPECIES	4	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.h.b.c #13
Bos_b	ANCESTRAL SPECIES		ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.h.b.c #13
Hybrid Bos Indicus	MODERN SPECIES	9	BCKDHA (ENSBIXG00005017645)	DMAC2 (ENSBIXG00005017716)	ERICH4 (ENSBIXG00005017740)	ENSBIXG00005017765	ENSBIXG00005002888	ENSBIXG00005017862 #13	ENSBIXG00005017878	LIPE (ENSBIXG00005017907) #16	CNFN (ENSBIXG00005017936)	MEGF8 (ENSBIXG00005002929) #17	TMEM145 (ENSBIXG00005018074) #18	PRR19 (ENSBIXG00005018080)	ENSBIXG00005018104 #19	CIC (ENSBIXG00005018122) #20	ERF (ENSBIXG00005018139) #21	GSK3A (ENSBIXG00005018197) #22	ZNF526 (ENSBIXG00005018214)	DEDD2 (ENSBIXG00005018238) #23	POU2F2 (ENSBIXG00005018313) #24	ZNF574 (ENSBIXG00005018351) #26	GRIK5 (ENSBIXG00005018372) #27	ATP1A3 (ENSBIXG00005018430) #28	RABAC1 (ENSBIXG00005006141) #29	ERFL (ENSBIXG00005018479) #30	ARHGEF1 (ENSBIXG00005018710) #31	CD79A (ENSBIXG00005018747)	ENSBIXG00005018880	DMRTC2 (ENSBIXG00005003077)	LYPD4 (ENSBIXG00005000055)	ENSBIXG00005019421 #13	ENSBIXG00005019497 ##13
Cow	MODERN SPECIES	9	BCKDHA (ENSBTAG00000016037)	B3GNT8 (ENSBTAG00000016041)	DMAC2 (ENSBTAG00000009449)	ERICH4 (ENSBTAG00000047423)	ENSBTAG00000050227	CEACAM1 (ENSBTAG00000005615) #13	ENSBTAG00000052955	LIPE (ENSBTAG00000038321) #16	CNFN (ENSBTAG00000031004)	MEGF8 (ENSBTAG00000031001) #17	TMEM145 (ENSBTAG00000039015) #18	PRR19 (ENSBTAG00000013283)	PAFAH1B3 (ENSBTAG00000019787) #19	CIC (ENSBTAG00000019785) #20	ERF (ENSBTAG00000000332) #21	GSK3A (ENSBTAG00000020756) #22	ZNF526 (ENSBTAG00000020754)	DEDD2 (ENSBTAG00000005761) #23	POU2F2 (ENSBTAG00000008556) #24	ZNF574 (ENSBTAG00000021789) #26	ENSBTAG00000054584 #27	GRIK5 (ENSBTAG00000011723) #27	ATP1A3 (ENSBTAG00000018635) #28	RABAC1 (ENSBTAG00000018633) #29	ENSBTAG00000053222 #21	ARHGEF1 (ENSBTAG00000018912) #31	CD79A (ENSBTAG00000001882)	RPS19 (ENSBTAG00000011963)	DMRTC2 (ENSBTAG00000019273)	LYPD4 (ENSBTAG00000020251)	ENSBTAG00000006859 #13
Bos_a	ANCESTRAL SPECIES	16	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT01010000223350	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00940000171483	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.h.a.a.b #13
Domestic yak	MODERN SPECIES	12	ENSBGRG00000019164	BCKDHA (ENSBGRG00000019059)	B3GNT8 (ENSBGRG00000019050)	DMAC2 (ENSBGRG00000018867)	ERICH4 (ENSBGRG00000018840)	ENSBGRG00000018623	ENSBGRG00000018545 #13	LIPE (ENSBGRG00000018426) #16	CNFN (ENSBGRG00000018386)	ENSBGRG00000018363 #17	TMEM145 (ENSBGRG00000018156) #18	PRR19 (ENSBGRG00000018108)	PAFAH1B3 (ENSBGRG00000018054) #19	CIC (ENSBGRG00000017444) #20	ENSBGRG00000017376 #21	GSK3A (ENSBGRG00000017191) #22	ZNF526 (ENSBGRG00000017155)	DEDD2 (ENSBGRG00000017057) #23	ENSBGRG00000017018 #24	ENSBGRG00000016760 #24	ZNF574 (ENSBGRG00000016716) #26	GRIK5 (ENSBGRG00000016203) #27	ATP1A3 (ENSBGRG00000015768) #28	RABAC1 (ENSBGRG00000015658) #29	ERFL (ENSBGRG00000015596) #30	ARHGEF1 (ENSBGRG00000014764) #31	CD79A (ENSBGRG00000014607)	ENSBGRG00000014536	DMRTC2 (ENSBGRG00000014389)	LYPD4 (ENSBGRG00000014288)	ENSBGRG00000014008 #13
Wild yak	MODERN SPECIES	2329										MEGF8 (ENSBMUG00000007653) #17	TMEM145 (ENSBMUG00000007684) #18	PRR19 (ENSBMUG00000007690)	PAFAH1B3 (ENSBMUG00000007703) #19	CIC (ENSBMUG00000007723) #20	ERF (ENSBMUG00000007734) #21	GSK3A (ENSBMUG00000007760) #22	ZNF526 (ENSBMUG00000007775)	DEDD2 (ENSBMUG00000007781) #23	POU2F2 (ENSBMUG00000007839) #24	ZNF574 (ENSBMUG00000007896) #26	GRIK5 (ENSBMUG00000007983) #27	ATP1A3 (ENSBMUG00000008087) #28	RABAC1 (ENSBMUG00000008116) #29	ERFL (ENSBMUG00000008138) #30	ARHGEF1 (ENSBMUG00000008227) #31	CD79A (ENSBMUG00000008237)	RPS19 (ENSBMUG00000008261)	DMRTC2 (ENSBMUG00000008273)	LYPD4 (ENSBMUG00000008287)	ENSBMUG00000008411 #13
American bison	MODERN SPECIES	1667															ERF (ENSBBBG00000001148) #21	GSK3A (ENSBBBG00000001091) #22
Caprinae	ANCESTRAL SPECIES	4	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00940000157162.c.b.j	ENSGT00390000006319	ENSGT01100000263479.D.a.b.h.a.b.a #13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00910000148701	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f.r	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b.h.a.b.b #13	ENSGT01100000263479.D.a.b.h.b.b #13
Rambouillet Sheep	MODERN SPECIES	5	TMEM91 (ENSOARG00020017943)	EXOSC5 (ENSOARG00020018062)	BCKDHA (ENSOARG00020018183)	B3GNT8 (ENSOARG00020018420)	DMAC2 (ENSOARG00020018442)	ENSOARG00020018539	ENSOARG00020019378 #13	LIPE (ENSOARG00020019526) #16	CNFN (ENSOARG00020019872)	MEGF8 (ENSOARG00020019929) #17	TMEM145 (ENSOARG00020020232) #18	PRR19 (ENSOARG00020020341)	PAFAH1B3 (ENSOARG00020020383) #19	CIC (ENSOARG00020020421) #20	ERF (ENSOARG00020020689) #21	GSK3A (ENSOARG00020020722) #22	ZNF526 (ENSOARG00020020823)	DEDD2 (ENSOARG00020020833) #23	POU2F2 (ENSOARG00020020916) #24	ZNF574 (ENSOARG00020021082) #26	GRIK5 (ENSOARG00020021115) #27	ATP1A3 (ENSOARG00020021250) #28	RABAC1 (ENSOARG00020021478) #29	ERFL (ENSOARG00020021537) #30	ARHGEF1 (ENSOARG00020021606) #31	CD79A (ENSOARG00020022164)	RPS19 (ENSOARG00020022219)	DMRTC2 (ENSOARG00020022282)	LYPD4 (ENSOARG00020022339)	ENSOARG00020022368 #13	ENSOARG00020022457 #13
Goat	MODERN SPECIES	9	BCKDHA (ENSCHIG00000025690)	B3GNT8 (ENSCHIG00000011490)	DMAC2 (ENSCHIG00000022889)	CYP2B6 (ENSCHIG00000021270)	ERICH4 (ENSCHIG00000015175)	ENSCHIG00000007384 #13	LIPE (ENSCHIG00000020815) #16	CNFN (ENSCHIG00000014477)	MEGF8 (ENSCHIG00000015019) #17	TMEM145 (ENSCHIG00000003376) #18	PRR19 (ENSCHIG00000022284)	ENSCHIG00000007871	PAFAH1B3 (ENSCHIG00000019643) #19	CIC (ENSCHIG00000015534) #20	ERF (ENSCHIG00000019624) #21	GSK3A (ENSCHIG00000027180) #22	ZNF526 (ENSCHIG00000018756)	DEDD2 (ENSCHIG00000020747) #23	POU2F2 (ENSCHIG00000025522) #24	ZNF574 (ENSCHIG00000009605) #26	GRIK5 (ENSCHIG00000025382) #27	ATP1A3 (ENSCHIG00000020539) #28	RABAC1 (ENSCHIG00000023419) #29	ENSCHIG00000008355	ENSCHIG00000027270 #21	ARHGEF1 (ENSCHIG00000022244) #31	CD79A (ENSCHIG00000013630)	ENSCHIG00000025321	DMRTC2 (ENSCHIG00000020158)	LYPD4 (ENSCHIG00000022395)	ENSCHIG00000006753 #13
Siberian musk deer	MODERN SPECIES	124	TMEM91 (ENSMMSG00000020489)	EXOSC5 (ENSMMSG00000020437)	BCKDHA (ENSMMSG00000020382)	B3GNT8 (ENSMMSG00000020371)	DMAC2 (ENSMMSG00000020294)	ERICH4 (ENSMMSG00000020233)	ENSMMSG00000020209 #13	LIPE (ENSMMSG00000020179) #16	CNFN (ENSMMSG00000020148)	ENSMMSG00000020131 #17	TMEM145 (ENSMMSG00000020115) #18	PRR19 (ENSMMSG00000020102)	PAFAH1B3 (ENSMMSG00000020080) #19	CIC (ENSMMSG00000020009) #20	ERF (ENSMMSG00000019974) #21	GSK3A (ENSMMSG00000019904) #22	ZNF526 (ENSMMSG00000019889)	DEDD2 (ENSMMSG00000019867) #23	POU2F2 (ENSMMSG00000018771) #24	ZNF574 (ENSMMSG00000018699) #26	GRIK5 (ENSMMSG00000018615) #27	ATP1A3 (ENSMMSG00000018343) #28	RABAC1 (ENSMMSG00000018284) #29	ERFL (ENSMMSG00000018244) #30	ARHGEF1 (ENSMMSG00000017749) #31	CD79A (ENSMMSG00000017672)	RPS19 (ENSMMSG00000017625)	DMRTC2 (ENSMMSG00000017583)	LYPD4 (ENSMMSG00000017557)	ENSMMSG00000016434 #13	CD177 (ENSMMSG00000016318)
Camelidae	ANCESTRAL SPECIES	15	ENSGT00940000153348.C	ENSGT00530000063174.b	ENSGT00940000161895	ENSGT00940000160500	ENSGT00390000006319	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00990000204044	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.e.b	ENSGT00940000161904	ENSGT00530000063351.a.b	ENSGT01100000263479.D.a.b #13	ENSGT00530000063351.a.a
Alpaca	MODERN SPECIES	3399																ENSVPAG00000001196 #22
Arabian camel	MODERN SPECIES	35	DMAC2 (ENSCDRG00005016562)	ERICH4 (ENSCDRG00005016660)	ENSCDRG00005016719 #13	ENSCDRG00005017139 #15	ENSCDRG00005017153 ##13	ENSCDRG00005017189	LIPE (ENSCDRG00005017218) #16	ENSCDRG00005017296	CNFN (ENSCDRG00005017339)	ENSCDRG00005017359 #17	TMEM145 (ENSCDRG00005017397) #18	PRR19 (ENSCDRG00005017429)	PAFAH1B3 (ENSCDRG00005017451) #19	CIC (ENSCDRG00005017516) #20	ERF (ENSCDRG00005017683) #21	GSK3A (ENSCDRG00005017728) #22	ZNF526 (ENSCDRG00005017810)	DEDD2 (ENSCDRG00005017828) #23	POU2F2 (ENSCDRG00005017912) #24	ZNF574 (ENSCDRG00005018127) #26	GRIK5 (ENSCDRG00005018143) #27	ATP1A3 (ENSCDRG00005018181) #28	RABAC1 (ENSCDRG00005018418) #29	ERFL (ENSCDRG00005018480) #30	ARHGEF1 (ENSCDRG00005018539) #31	CD79A (ENSCDRG00005018664)	ENSCDRG00005018687	DMRTC2 (ENSCDRG00005018727)	LYPD4 (ENSCDRG00005018778)	ENSCDRG00005018844 #13	ENSCDRG00005018917
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b #22
Hedgehog	MODERN SPECIES	6241																ENSEEUG00000015489 #22
Atlantogenata	ANCESTRAL SPECIES	142					ENSGT00530000063351.a.a	ENSGT01100000263479.D.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29
Afrotheria	ANCESTRAL SPECIES	22	ENSGT00940000162551	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29
Tenrec	MODERN SPECIES	6060																GSK3A (ENSETEG00000017050) #22	ZNF526 (ENSETEG00000017049)
Afrotheria_a	ANCESTRAL SPECIES	21	ENSGT00940000162551	ENSGT00940000159046.C	ENSGT00940000160803	ENSGT00940000153599.B.a	ENSGT00530000063351.a.a	ENSGT01100000263479.D.a #13	ENSGT00390000002861 #15	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29
Hyrax	MODERN SPECIES	4397							CXCL17 (ENSPCAG00000017044) #15	LIPE (ENSPCAG00000017036) #16	CNFN (ENSPCAG00000017035)	MEGF8 (ENSPCAG00000017025) #17	TMEM145 (ENSPCAG00000017017) #18	PRR19 (ENSPCAG00000017015)	PAFAH1B3 (ENSPCAG00000017013) #19	CIC (ENSPCAG00000017001) #20	ERF (ENSPCAG00000016986) #21	GSK3A (ENSPCAG00000016967) #22	ZNF526 (ENSPCAG00000016959)	DEDD2 (ENSPCAG00000016955) #23
Elephant	MODERN SPECIES	375	ENSLAFG00000030722	ENSLAFG00000028809	ENSLAFG00000026795	ENSLAFG00000026510	ENSLAFG00000011795	ENSLAFG00000027437	ENSLAFG00000017467 #13	CXCL17 (ENSLAFG00000016397) #15	LIPE (ENSLAFG00000028682) #16	CNFN (ENSLAFG00000022262)	ENSLAFG00000027309 #17	TMEM145 (ENSLAFG00000023281) #18	PRR19 (ENSLAFG00000029797)	PAFAH1B3 (ENSLAFG00000031937) #19	ERF (ENSLAFG00000021591) #21	GSK3A (ENSLAFG00000015460) #22	DEDD2 (ENSLAFG00000030947) #23	POU2F2 (ENSLAFG00000009508) #24	ZNF574 (ENSLAFG00000000308) #26	GRIK5 (ENSLAFG00000007733) #27	ATP1A3 (ENSLAFG00000003415) #28	RABAC1 (ENSLAFG00000011334) #29
Xenarthra	ANCESTRAL SPECIES	468											ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00390000010703	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26
Armadillo	MODERN SPECIES	2010											MEGF8 (ENSDNOG00000032706) #17	TMEM145 (ENSDNOG00000031828) #18	PRR19 (ENSDNOG00000025300)	PAFAH1B3 (ENSDNOG00000002870) #19	CIC (ENSDNOG00000047657) #20	GSK3A (ENSDNOG00000004543) #22	ZNF526 (ENSDNOG00000035898)	DEDD2 (ENSDNOG00000047718) #23	POU2F2 (ENSDNOG00000046180) #24	ZNF574 (ENSDNOG00000033618) #26
Marsupialia	ANCESTRAL SPECIES	20	ENSGT00940000162336	ENSGT00940000161392	ENSGT01100000263479.C ##13	ENSGT01100000263479.B ##13	ENSGT00940000161167.b.a	ENSGT01100000263479.E.h.b ##13	ENSGT01100000263479.A.g.a.a.a ##13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00390000010703	ENSGT00940000153981.B #18	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a	ENSGT00530000063351.b	ENSGT00940000153599.B.a
Marsupialia_b	ANCESTRAL SPECIES	4	ENSGT01100000263479.C ##13	ENSGT01100000263479.B ##13	ENSGT00940000161167.b.a	ENSGT01100000263479.E.h.b ##13	ENSGT01100000263479.D.b ##13	ENSGT01100000263479.A.g.a.a.a ##13	ENSGT01100000263479.A.g.a.b ##13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00390000010703	ENSGT00940000153981.B #18	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT01040000241026	ENSGT00940000163212.A #30	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a	ENSGT01080000257333.D.d.a.a
Diprotodontia	ANCESTRAL SPECIES	52	ENSGT01100000263479.C ##13	ENSGT01100000263479.B ##13	ENSGT00940000161167.b.a	ENSGT01100000263479.D.b ##13	ENSGT01100000263479.A.g.a.a.a ##13	ENSGT01100000263479.A.g.a.b ##13	ENSGT01100000263479.A.g.a.a.b ##13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00390000010703	ENSGT00940000153981.B #18	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT01040000241026	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a	ENSGT01080000257333.D.d.a.a	ENSGT00940000153599.B.a
Diprotodontia_a	ANCESTRAL SPECIES	45	ENSGT01100000263479.C ##13	ENSGT01100000263479.B ##13	ENSGT00940000161167.b.a	ENSGT01100000263479.D.b ##13	ENSGT01100000263479.A.g.a.a.a ##13	ENSGT01100000263479.A.g.a.b ##13	ENSGT01100000263479.A.g.a.a.b ##13	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00390000010703	ENSGT00940000153981.B #18	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT01040000241026	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00390000013102.f	ENSGT00940000161904	ENSGT00530000063351.a	ENSGT01080000257333.D.d.a.a	ENSGT00940000153599.B.a
koala	MODERN SPECIES	100	CEACAM16 (ENSPCIG00000001694) ##13	ENSPCIG00000001678 ##13	ENSPCIG00000033074	ENSPCIG00000022892	ENSPCIG00000012522 ##13	ENSPCIG00000033973 ##13	ENSPCIG00000034185 ##13	ENSPCIG00000020891 ##13	LIPE (ENSPCIG00000004879) #16	ENSPCIG00000004873	MEGF8 (ENSPCIG00000037329) #17	ENSPCIG00000020885	TMEM145 (ENSPCIG00000020884) #18	PAFAH1B3 (ENSPCIG00000034607) #19	ERF (ENSPCIG00000020875) #21	GSK3A (ENSPCIG00000020874) #22	ZNF526 (ENSPCIG00000020873)	ENSPCIG00000032925 #23	POU2F2 (ENSPCIG00000005189) #24	ZNF574 (ENSPCIG00000005174) #26	GRIK5 (ENSPCIG00000013763) #27	ATP1A3 (ENSPCIG00000013743) #28	RABAC1 (ENSPCIG00000013738) #29	ENSPCIG00000013735	ENSPCIG00000004723 #21	ARHGEF1 (ENSPCIG00000004739) #31	CD79A (ENSPCIG00000023360)	ENSPCIG00000020871	ENSPCIG00000020868	ENSPCIG00000020865 ##13	ENSPCIG00000005474
Common wonbat	MODERN SPECIES	783										ENSVURG00010009849 ##13	ENSVURG00010009835	TMEM145 (ENSVURG00010009799) #18	PAFAH1B3 (ENSVURG00010009793) #19	ENSVURG00010009779 #20	ERF (ENSVURG00010009762) #21	GSK3A (ENSVURG00010009697) #22	ZNF526 (ENSVURG00010009687)	DEDD2 (ENSVURG00010009683) #23	POU2F2 (ENSVURG00010009672) #24	ZNF574 (ENSVURG00010009667) #26	GRIK5 (ENSVURG00010009647) #27	ATP1A3 (ENSVURG00010009395) #28	RABAC1 (ENSVURG00010009370) #29	ENSVURG00010009363 #21	ARHGEF1 (ENSVURG00010009107) #31	CD79A (ENSVURG00010009070)	ENSVURG00010009061	ENSVURG00010009054	ENSVURG00010009027	ENSVURG00010009015	ENSVURG00010009009
Wallaby	MODERN SPECIES	1502																GSK3A (ENSMEUG00000005389) #22
Platypus	MODERN SPECIES	16	CEACAM16 (ENSOANG00000012180) ##13	ENSOANG00000050885 ##13	ENSOANG00000049127 ##13	ENSOANG00000044640 ##13	ENSOANG00000009705 ##13	ENSOANG00000044064 ##13	LIPE (ENSOANG00000039638) #16	ENSOANG00000041365	CNFN (ENSOANG00000004593)	MEGF8 (ENSOANG00000037647) #17	TMEM145 (ENSOANG00000012875) #18	ENSOANG00000037208	PAFAH1B3 (ENSOANG00000021299) #19	CIC (ENSOANG00000036051) #20	ENSOANG00000045058 #21	GSK3A (ENSOANG00000037968) #22	DEDD2 (ENSOANG00000036383) #23	POU2F2 (ENSOANG00000044045) #24	ZNF574 (ENSOANG00000047070) #26	GRIK5 (ENSOANG00000012545) #27	ATP1A3 (ENSOANG00000042242) #28	ENSOANG00000045537 #29	ENSOANG00000013662 #21	ARHGEF1 (ENSOANG00000013661) #31	CD79A (ENSOANG00000039470)	RPS19 (ENSOANG00000013660)	ENSOANG00000013938	ENSOANG00000013939	ENSOANG00000004056	LYPD3 (ENSOANG00000004055)	PHLDB3 (ENSOANG00000002789)
Sauria	ANCESTRAL SPECIES	43	ENSGT00940000162551	ENSGT00390000004140.a	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00730000111407	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT00940000162297.h	ENSGT00390000013102.e.a	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265	ENSGT00940000162297.g	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00940000158211	ENSGT00950000185905	ENSGT00940000163576	ENSGT00940000153981.B #18	ENSGT00940000160262 #17	ENSGT00940000157920.b
Lepidosauria	ANCESTRAL SPECIES	113																ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000154265.yb	ENSGT00940000162297.g	ENSGT00940000154265.`c	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00940000161180 #31	ENSGT00940000154363.A
Episquamata	ANCESTRAL SPECIES	7	ENSGT00940000154757	ENSGT00950000183007.a.a.b.eb	ENSGT00950000183007.b.i.a.b	ENSGT00940000164395.a.a.b.b	ENSGT00950000183007.a.a.a.b	ENSGT00950000183206.a.b.a.b	ENSGT00940000153599.A	ENSGT00940000153599.B.a	ENSGT01020000230438.B.a.a	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000162551	ENSGT00390000004140.a	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000154265.yb	ENSGT00940000162297.g	ENSGT00940000154265.`c	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00940000161180 #31
Laterata	ANCESTRAL SPECIES	17	ENSGT00730000111407	ENSGT00960000190411	ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.e.b	ENSGT00940000154265.yb	ENSGT00940000162297.g.f	ENSGT00940000154265.`c.d	ENSGT00940000154265.`c.c.a	ENSGT00940000162297.g.e.a	ENSGT00940000154265.`c.c.b	ENSGT00940000162297.g.e.b	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00940000158211	ENSGT00940000163576	ENSGT00940000153981.B #18	ENSGT00940000160262 #17	ENSGT00940000161202.b
Common wall lizard	MODERN SPECIES	16	RPS19 (ENSPMRG00000008934)	ENSPMRG00000008923	ENSPMRG00000008921	ENSPMRG00000008916	ENSPMRG00000008910	ENSPMRG00000008907	ENSPMRG00000008905	ENSPMRG00000008898	ENSPMRG00000008894	ENSPMRG00000008878	ENSPMRG00000008783	ENSPMRG00000008756	PAFAH1B3 (ENSPMRG00000008752) #19	CIC (ENSPMRG00000008732) #20	ENSPMRG00000008723 #21	GSK3A (ENSPMRG00000008717) #22	ZNF526 (ENSPMRG00000008714)	DEDD2 (ENSPMRG00000008710) #23	ENSPMRG00000008701	POU2F2 (ENSPMRG00000008687) #24	ZNF574 (ENSPMRG00000008683) #26	GRIK5 (ENSPMRG00000008664) #27	ENSPMRG00000008651	ATP1A3 (ENSPMRG00000008633) #28	ENSPMRG00000008627 #29	ENSPMRG00000008623	ENSPMRG00000008613	ENSPMRG00000008605 #21	ARHGEF1 (ENSPMRG00000008499) #31	ENSPMRG00000008468	ENSPMRG00000008388
Argentine black and white tegu	MODERN SPECIES	59	ENSSMRG00000005595	CADM4 (ENSSMRG00000005596)	ENSSMRG00000005627	ENSSMRG00000005631	ENSSMRG00000005772	ENSSMRG00000005788	ENSSMRG00000005804	ENSSMRG00000005805	ENSSMRG00000005806	ENSSMRG00000005807	ENSSMRG00000005808	ENSSMRG00000005822	PAFAH1B3 (ENSSMRG00000005828) #19	CIC (ENSSMRG00000005892) #20	ENSSMRG00000005911 #21	GSK3A (ENSSMRG00000005912) #22	ZNF526 (ENSSMRG00000005914)	DEDD2 (ENSSMRG00000005915) #23	POU2F2 (ENSSMRG00000005916) #24	ZNF574 (ENSSMRG00000005918) #26	GRIK5 (ENSSMRG00000005921) #27	ATP1A3 (ENSSMRG00000005944) #28	ENSSMRG00000005955	RABAC1 (ENSSMRG00000005958) #29	ENSSMRG00000005960	ENSSMRG00000005961 #21	ARHGEF1 (ENSSMRG00000005965) #31	ENSSMRG00000005968	ENSSMRG00000005970	ENSSMRG00000005987	TMEM145 (ENSSMRG00000005989) #18
Toxicofera	ANCESTRAL SPECIES	22																ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.`c	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20
Lizard	MODERN SPECIES	1499																GSK3A (ENSACAG00000003202) #22	DEDD2 (ENSACAG00000029646) #23	ENSACAG00000003465 #26	POU2F2 (ENSACAG00000003359) #24
Elapidae	ANCESTRAL SPECIES	9	ENSGT01030000235778	ENSGT00390000003568	ENSGT00950000183007.a.a.b.eb	ENSGT00950000183007.b.i.a.b	ENSGT00940000164395.a.a.b.b	ENSGT00950000183007.a.a.a.b	ENSGT00950000183206.a.b.a.b	ENSGT00940000153599.A	ENSGT00940000153599.B.a	ENSGT01020000230438.B.a.a.bb.a	ENSGT01020000230438.B.a.a.bb.b	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000162551	ENSGT00390000004140.a	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.`c
Indian cobra	MODERN SPECIES	11	ENSNNAG00000004107	ENSNNAG00000004130	ENSNNAG00000004164	ENSNNAG00000004169	ENSNNAG00000004196	ENSNNAG00000004215	ENSNNAG00000004229	CADM4 (ENSNNAG00000004262)	ENSNNAG00000004297	ENSNNAG00000004342	ENSNNAG00000004375	ENSNNAG00000004452	PAFAH1B3 (ENSNNAG00000004692) #19	CIC (ENSNNAG00000004736) #20	ENSNNAG00000005013 #21	GSK3A (ENSNNAG00000005075) #22	DEDD2 (ENSNNAG00000005193) #23	ENSNNAG00000005224 #24	ENSNNAG00000005281 #24	ZNF574 (ENSNNAG00000005293) #26	GRIK5 (ENSNNAG00000005420) #27	ATP1A3 (ENSNNAG00000006679) #28	ENSNNAG00000013552	ENSNNAG00000013568 #21	ARHGEF1 (ENSNNAG00000013616) #31	ENSNNAG00000013911	ENSNNAG00000013925	PRDM7 (ENSNNAG00000013938)	ENSNNAG00000013959	ENSNNAG00000013984	TMEM145 (ENSNNAG00000014002) #18
Elapidae_a	ANCESTRAL SPECIES	168																ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29
Acanthophiinae	ANCESTRAL SPECIES	32	ENSGT00940000160803	ENSGT00940000159046.C	ENSGT00940000162551	ENSGT00390000004140.a	ENSGT00990000208224.a	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.`c	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00960000189159	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT01100000263489.a.a.b.b.c.a	ENSGT00940000158211	ENSGT00950000185905	ENSGT00940000163576	ENSGT00940000153981.B #18	ENSGT00940000160262 #17
Eastern brown snake	MODERN SPECIES	77					ENSPTXG00000013281	ENSPTXG00000013280	ENSPTXG00000013279	ENSPTXG00000013278	ENSPTXG00000013276	CADM4 (ENSPTXG00000019143)	RPS19 (ENSPTXG00000019142)	ENSPTXG00000019140	PAFAH1B3 (ENSPTXG00000019138) #19	CIC (ENSPTXG00000019136) #20	ENSPTXG00000019134 #21	GSK3A (ENSPTXG00000019133) #22	ZNF526 (ENSPTXG00000019131)	DEDD2 (ENSPTXG00000019130) #23	ZNF574 (ENSPTXG00000019128) #26	GRIK5 (ENSPTXG00000019124) #27	ENSPTXG00000019122	ENSPTXG00000019102 #28	RABAC1 (ENSPTXG00000019099) #29	ENSPTXG00000019098	ENSPTXG00000019097 #21	ARHGEF1 (ENSPTXG00000019095) #31	ENSPTXG00000019093	ENSPTXG00000019092	PRDM7 (ENSPTXG00000019091)	ENSPTXG00000019090	TMEM145 (ENSPTXG00000019089) #18
Mainland tiger snake	MODERN SPECIES	155	ENSNSUG00000009797	ENSNSUG00000009798	ETHE1 (ENSNSUG00000009800)	XRCC1 (ENSNSUG00000009801)	ENSNSUG00000009802	ENSNSUG00000009803	ENSNSUG00000009804	ENSNSUG00000009805	ENSNSUG00000009807	CADM4 (ENSNSUG00000009808)	RPS19 (ENSNSUG00000009809)	ENSNSUG00000009810	GBP6 (ENSNSUG00000009811)	CIC (ENSNSUG00000009812) #20	ENSNSUG00000009813 #21	GSK3A (ENSNSUG00000009814) #22	ZNF526 (ENSNSUG00000009825)	DEDD2 (ENSNSUG00000009826) #23	ZNF574 (ENSNSUG00000009827) #26	GRIK5 (ENSNSUG00000009828) #27	ATP1A3 (ENSNSUG00000009829) #28	ENSNSUG00000009871	ENSNSUG00000009872	ENSNSUG00000009873 #21	ARHGEF1 (ENSNSUG00000009875) #31	ENSNSUG00000009876	PRDM7 (ENSNSUG00000009877)	ENSNSUG00000009878	ENSNSUG00000009879	MEGF8 (ENSNSUG00000009880) #17	ENSNSUG00000009881
Blue-lipped sea krait	MODERN SPECIES	3607															ENSLLTG00000001790 #21	GSK3A (ENSLLTG00000001798) #22	ZNF526 (ENSLLTG00000001809)	DEDD2 (ENSLLTG00000001815) #23
tuatara	MODERN SPECIES	1580	ENSSPUG00000015934	ZNF576 (ENSSPUG00000015942)	ENSSPUG00000015950	CADM4 (ENSSPUG00000015976)	RPS19 (ENSSPUG00000016051)	ENSSPUG00000016105	ENSSPUG00000016251	ENSSPUG00000016293 #20	ENSSPUG00000016498	ENSSPUG00000016510	ENSSPUG00000016520	PAFAH1B3 (ENSSPUG00000016531) #19	ENSSPUG00000016538 #20	ENSSPUG00000016548 #20	ERF (ENSSPUG00000016555) #21	GSK3A (ENSSPUG00000016559) #22	ZNF526 (ENSSPUG00000016569)	DEDD2 (ENSSPUG00000016572) #23	POU2F2 (ENSSPUG00000016579) #24	GRIK5 (ENSSPUG00000016676) #27	ATP1A3 (ENSSPUG00000016698) #28	RABAC1 (ENSSPUG00000016746) #29	ENSSPUG00000016770 #31	ENSSPUG00000016807 #31	CD79A (ENSSPUG00000016813)	PRDM7 (ENSSPUG00000016819)	TMEM145 (ENSSPUG00000016829) #18	ENSSPUG00000016847	ENSSPUG00000016852	LIPE (ENSSPUG00000016872) #16	ENSSPUG00000016885 ##13
Archelosauria	ANCESTRAL SPECIES	48	ENSGT00390000004140.a	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00730000111407	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT00940000162297.h	ENSGT00390000013102.e.a	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.ac.a	ENSGT00940000162297.g	ENSGT00940000154265.bc	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00940000158211	ENSGT00950000185905	ENSGT00940000163576
Cryptodira	ANCESTRAL SPECIES	68	ENSGT00390000004140.a	ENSGT00950000183007.a.a.a.a	ENSGT00950000183007.a.b	ENSGT00730000111407	ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.e.b	ENSGT00390000013102.e.a	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.ac.a	ENSGT00940000162297.g	ENSGT00940000154265.bc	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29
Testudinoidea	ANCESTRAL SPECIES	66			ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.e.b	ENSGT00390000013102.e.a	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.ac.a.d	ENSGT00940000154265.ac.a.c	ENSGT00940000154265.bc.a.a.b.b	ENSGT00940000162297.g	ENSGT00940000154265.bc.a.b.b	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29
Emydidae	ANCESTRAL SPECIES	106				ENSGT00950000185295	ENSGT00940000161223	ENSGT00390000013102.e.b	ENSGT01030000234555.a.a.b.b	ENSGT00940000154265.ac.a.d	ENSGT00940000154265.ac.a.c	ENSGT00940000154265.bc.a.a.b.b	ENSGT00940000162297.g.b	ENSGT00940000154265.bc.a.b.b	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000160115 #24	ENSGT00940000158852 #27	ENSGT00940000160476.b #28
painted turtle	MODERN SPECIES	1096				ENSCPBG00000014567	CADM4 (ENSCPBG00000014564)	RPS19 (ENSCPBG00000014561)	ENSCPBG00000014558	ENSCPBG00000014553	ENSCPBG00000014550	ENSCPBG00000014533	ENSCPBG00000013759	ENSCPBG00000013744	PAFAH1B3 (ENSCPBG00000013743) #19	CIC (ENSCPBG00000013740) #20	ENSCPBG00000013738 #21	GSK3A (ENSCPBG00000013663) #22	ENSCPBG00000013652	POU2F2 (ENSCPBG00000013649) #24	GRIK5 (ENSCPBG00000013608) #27	ATP1A3 (ENSCPBG00000003845) #28
Testudinidae	ANCESTRAL SPECIES	125												ENSGT00940000154265.bc.a.b.a	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23
Abingdon island giant tortoise	MODERN SPECIES	447										ENSCABG00000001132	ENSCABG00000001177	ENSCABG00000001184	PAFAH1B3 (ENSCABG00000001186) #19	CIC (ENSCABG00000001195) #20	ENSCABG00000001734 #21	GSK3A (ENSCABG00000001745) #22	ZNF526 (ENSCABG00000002042)	DEDD2 (ENSCABG00000002045) #23
Chinese turtle	MODERN SPECIES	1407																GSK3A (ENSPSIG00000006614) #22	ENSPSIG00000006586	ENSPSIG00000000176 #23
Archosauria	ANCESTRAL SPECIES	71											ENSGT00730000111407	ENSGT00940000161223	ENSGT00390000013102.f	ENSGT00940000162297.h	ENSGT00940000157292.h #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476.b #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A	ENSGT00950000185905
Australian saltwater crocodile	MODERN SPECIES	45	ENSCPRG00005012346	SMIM1 (ENSCPRG00005012344)	LRRC47 (ENSCPRG00005012342)	CEP104 (ENSCPRG00005012311)	DFFB (ENSCPRG00005012291)	C1orf174 (ENSCPRG00005012263)	ENSCPRG00005012252	ENSCPRG00005012249	ZNF576 (ENSCPRG00005012246)	CADM4 (ENSCPRG00005012239)	ENSCPRG00005012227	ENSCPRG00005012223	ENSCPRG00005012207	ENSCPRG00005012194	ERF (ENSCPRG00005012135) #21	GSK3A (ENSCPRG00005012074) #22	ZNF526 (ENSCPRG00005012067)	DEDD2 (ENSCPRG00005012064) #23	ENSCPRG00005012061	POU2F2 (ENSCPRG00005012043) #24	ZNF574 (ENSCPRG00005012035) #26	GRIK5 (ENSCPRG00005011999) #27	ATP1A3 (ENSCPRG00005011977) #28	AJAP1 (ENSCPRG00005011967)	NPHP4 (ENSCPRG00005011932)	KCNAB2 (ENSCPRG00005011911)	CHD5 (ENSCPRG00005011501)	ENSCPRG00005011425	RNF207 (ENSCPRG00005011387)	ICMT (ENSCPRG00005011372)	GPR153 (ENSCPRG00005011369)
Anura	ANCESTRAL SPECIES	180							ENSGT01010000228732	ENSGT00730000111056 #16	ENSGT00940000161202.b	ENSGT00940000160262 #17	ENSGT00940000153981.B #18	ENSGT00940000163576	ENSGT00950000183199.a.b #19	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000162624	ENSGT00390000008714.b #23	ENSGT00940000160115 #24	ENSGT00940000161799 #26	ENSGT00940000158852 #27	ENSGT00940000160476 #28	ENSGT00390000010549 #29	ENSGT00940000161180 #31	ENSGT00940000154363.A
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000020686	ENSLLEG00000020570	MED25 (ENSLLEG00000020334)	ENSLLEG00000020298	POLD1 (ENSLLEG00000017518)	ENSLLEG00000017208	AP2A1 (ENSLLEG00000016297)	ENSLLEG00000015796	ENSLLEG00000015728	ENSLLEG00000015628	ENSLLEG00000015455	PAFAH1B3 (ENSLLEG00000015175) #19	CIC (ENSLLEG00000014745) #20	ENSLLEG00000014713	ENSLLEG00000014609 #21	GSK3A (ENSLLEG00000014401) #22	ENSLLEG00000014367	ZNF526 (ENSLLEG00000014314)	DEDD2 (ENSLLEG00000014259) #23	POU2F2 (ENSLLEG00000013736) #24	ENSLLEG00000013650	ZNF574 (ENSLLEG00000013615) #26	ENSLLEG00000013600	ENSLLEG00000013575	GRIK5 (ENSLLEG00000013044) #27	ENSLLEG00000012995	ENSLLEG00000012947	TMEM145 (ENSLLEG00000012789) #18	RUVBL2 (ENSLLEG00000012357)	ENSLLEG00000012274	NTF4 (ENSLLEG00000012254)
Frog	MODERN SPECIES	7	ENSXETG00000046739	ENSXETG00000045122 ##13	ENSXETG00000044330	lipe (ENSXETG00000012042) #16	ENSXETG00000037499	cnfn.2 (ENSXETG00000032177)	cnfn.1 (ENSXETG00000026058)	cnfn.3 (ENSXETG00000012044)	ENSXETG00000038844	megf8 (ENSXETG00000034254) #17	tmem145 (ENSXETG00000012053) #18	tlr21 (ENSXETG00000032848)	pafah1b3 (ENSXETG00000012063) #19	cic (ENSXETG00000030813) #20	erf (ENSXETG00000049427) #21	gsk3a (ENSXETG00000012072) #22	znf526 (ENSXETG00000033486)	dedd2 (ENSXETG00000012093) #23	pou2f2 (ENSXETG00000033156) #24	znf574 (ENSXETG00000027536) #26	grik5 (ENSXETG00000031503) #27	atp1a3 (ENSXETG00000023811) #28	rabac1 (ENSXETG00000023854) #29	ENSXETG00000040615 #21	arhgef1 (ENSXETG00000033428) #31	cd79a (ENSXETG00000030585)	ENSXETG00000039529	ENSXETG00000040338	ENSXETG00000001873	xa-1 (ENSXETG00000043467)	ENSXETG00000000128
Coelacanth	MODERN SPECIES	644												tlr21 (ENSLACG00000001078)	PAFAH1B3 (ENSLACG00000002167) #19	CIC (ENSLACG00000002764) #20	ERF (ENSLACG00000006078) #21	GSK3A (ENSLACG00000006537) #22	ZNF526 (ENSLACG00000022108)	DEDD2 (ENSLACG00000007356) #23	POU2F2 (ENSLACG00000010150) #24	ENSLACG00000010744 #26	GRIK5 (ENSLACG00000011972) #27	ATP1A3 (ENSLACG00000012768) #28	RABAC1 (ENSLACG00000013016) #29	ENSLACG00000013158	ENSLACG00000013285	ENSLACG00000013391	ENSLACG00000013519	ENSLACG00000013642	ENSLACG00000013742	RPS19 (ENSLACG00000013781)	PRDM7 (ENSLACG00000013877)
Actinopterygii	ANCESTRAL SPECIES	312											ENSGT00940000163576	ENSGT00950000183199.a.b #19	ENSGT00510000047886.b	ENSGT00940000159960 #20	ENSGT00940000157292 #21	ENSGT00520000055635.c.b #22	ENSGT00940000160115 #24	ENSGT00390000008714.b #23	ENSGT00390000010549 #29	ENSGT00940000160476 #28	ENSGT00940000158852 #27	ENSGT00940000161799 #26
Reedfish	MODERN SPECIES	8	larp6a (ENSECRG00000022458)	ENSECRG00000022453	adal (ENSECRG00000022448)	tm2d3 (ENSECRG00000022442)	ENSECRG00000022434	ulk3 (ENSECRG00000022422)	ENSECRG00000022412	cplx3a (ENSECRG00000022409)	csk (ENSECRG00000022391)	edc3 (ENSECRG00000022380)	cyp1a (ENSECRG00000022372)	FAM219B (ENSECRG00000022369)	ENSECRG00000022361	ENSECRG00000022356	ENSECRG00000022326 #26	gsk3aa (ENSECRG00000022299) #22	ENSECRG00000022288 #26	grik5 (ENSECRG00000022271) #27	ENSECRG00000021367 #28	rabac1 (ENSECRG00000021232) #29	dedd1 (ENSECRG00000021218) #23	ENSECRG00000021202	ENSECRG00000021186 #21	ENSECRG00000021153 #20	ctdspl2a (ENSECRG00000021123)	GOLM2 (ENSECRG00000021083)	FRMD5 (ENSECRG00000021062)	FRMD5 (ENSECRG00000021050)	WDR76 (ENSECRG00000021030)	ENSECRG00000021007	ctsh (ENSECRG00000020983)
Neopterygii	ANCESTRAL SPECIES	618														ENSGT00940000158852 #27	ENSGT00940000161799 #26	ENSGT00520000055635.c.b #22
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	620														ENSGT00940000159960.c #20	ENSGT00940000157292.fc.a #21	ENSGT00520000055635.c.b.a #22
Clupeocephala	ANCESTRAL SPECIES	52	ENSGT00940000157293	ENSGT01100000263531.G	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00520000055635.c.b.a #22	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.b	ENSGT00940000155088.b.a.a	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00950000183106.a.b.a	ENSGT00940000157383.g.a	ENSGT00940000167696	ENSGT00940000160313	ENSGT01030000234575.c.a.a.a.a.a.a.b.b.b	ENSGT01060000248591.b.a	ENSGT00390000007786.b.h
Euteleosteomorpha	ANCESTRAL SPECIES	72	ENSGT01100000263531.G	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.b	ENSGT00940000155088.b.a.a	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00950000183106.a.b.a	ENSGT00940000157383.g.a	ENSGT00940000167696	ENSGT00940000165997.a	ENSGT00940000160313
Acanthomorphata	ANCESTRAL SPECIES	157	ENSGT01100000263531.G.l	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22
Euacanthomorphacea	ANCESTRAL SPECIES	24	ENSGT01100000263531.G.l	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT00940000155824.C.fc	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a	ENSGT00940000166582	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Percomorphaceae	ANCESTRAL SPECIES	10	ENSGT01100000263531.G.l	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000169819	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT01030000234921	ENSGT00940000155824.C.fc	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197
Percomorphaceae_B	ANCESTRAL SPECIES	15	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT01030000234921	ENSGT00940000155824.C.fc	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197
Percomorphaceae_C	ANCESTRAL SPECIES	15	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Eupercaria	ANCESTRAL SPECIES	11	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Tetraodontidae	ANCESTRAL SPECIES	20										ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000165604	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Tetraodon	MODERN SPECIES	26	KCNIP4 (ENSTNIG00000011324)	gba3 (ENSTNIG00000002058)	ENSTNIG00000002174	PPARGC1A (ENSTNIG00000011325)	sepsecs (ENSTNIG00000011326)	ENSTNIG00000011327	ENSTNIG00000001248	ENSTNIG00000005764	ENSTNIG00000004153	ssr1 (ENSTNIG00000004152)	ezh2 (ENSTNIG00000004151)	ENSTNIG00000005121	ENSTNIG00000003917 #28	POU2F2 (ENSTNIG00000006986) #24	erf (ENSTNIG00000006987) #21	gsk3aa (ENSTNIG00000006988) #22	bmp8a (ENSTNIG00000006989)	MACF1 (ENSTNIG00000006990)	ndufs5 (ENSTNIG00000006930)	ak2 (ENSTNIG00000011328)	ENSTNIG00000000304	cry3a (ENSTNIG00000011329)	ENSTNIG00000001276	zmym4.1 (ENSTNIG00000011330)	sfpq (ENSTNIG00000011331)	lypla2 (ENSTNIG00000011332)	NPBWR2 (ENSTNIG00000000852)	eloa (ENSTNIG00000011333)	oprl1 (ENSTNIG00000011334)	ENSTNIG00000011335	rgs19 (ENSTNIG00000011336)
Fugu	MODERN SPECIES	3	eno2 (ENSTRUG00000000195)	chd4a (ENSTRUG00000027499)	vamp1a (ENSTRUG00000006307)	ENSTRUG00000032112	ENSTRUG00000002814	ENSTRUG00000002721	ENSTRUG00000025815	pvrl2l (ENSTRUG00000020468)	ENSTRUG00000030907	ENSTRUG00000027420	ENSTRUG00000030748	ATP1A3 (ENSTRUG00000002904) #28	ENSTRUG00000003777 #24	erf (ENSTRUG00000004604) #21	ENSTRUG00000024028 #20	gsk3aa (ENSTRUG00000004889) #22	zgc:91910 (ENSTRUG00000029186)	bmp8a (ENSTRUG00000005036)	MACF1 (ENSTRUG00000005469)	ndufs5 (ENSTRUG00000006762)	cnep1r1 (ENSTRUG00000024132)	ENSTRUG00000026119	ENSTRUG00000026340	ENSTRUG00000031046	ENSTRUG00000027713	ENSTRUG00000030152	rnf19b (ENSTRUG00000001077)	ak2 (ENSTRUG00000001235)	ENSTRUG00000024338	ENSTRUG00000031076	ENSTRUG00000020885
Eupecaria_A	ANCESTRAL SPECIES	12	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Ballan wrasse	MODERN SPECIES	277														ENSLBEG00000003986 #24	erf (ENSLBEG00000003936) #21	gsk3aa (ENSLBEG00000003847) #22	zgc:91910 (ENSLBEG00000003804)	bmp8a (ENSLBEG00000003783)	MACF1 (ENSLBEG00000003517)	ndufs5 (ENSLBEG00000003449)	rnf19b (ENSLBEG00000003413)	ak2 (ENSLBEG00000003378)	ENSLBEG00000003304	ENSLBEG00000003261	ENSLBEG00000003244	ENSLBEG00000003215	ENSLBEG00000003200	sfpq (ENSLBEG00000003163)	lypla2 (ENSLBEG00000003109)	pithd1 (ENSLBEG00000003093)	eloa (ENSLBEG00000003069)
Eupecaria_B	ANCESTRAL SPECIES	12	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Eupecaria_C	ANCESTRAL SPECIES	13	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Gilthead seabream	MODERN SPECIES	17	ENSSAUG00010020905	ENSSAUG00010000163	daxx (ENSSAUG00010000185)	zbtb22b (ENSSAUG00010000206)	ENSSAUG00010000261	znf384a (ENSSAUG00010000344)	FLOT1 (ENSSAUG00010000401)	ENSSAUG00010000511	ENSSAUG00010000516	TCF19 (ENSSAUG00010000521)	pvrl2l (ENSSAUG00010000541)	atp1a3a (ENSSAUG00010000616)	POU2F2 (ENSSAUG00010001042) #24	erf (ENSSAUG00010001048) #21	ENSSAUG00010001054 #20	gsk3aa (ENSSAUG00010001086) #22	ENSSAUG00010001417	zgc:91910 (ENSSAUG00010001423)	bmp8a (ENSSAUG00010001427)	MACF1 (ENSSAUG00010002438)	NDUFS5 (ENSSAUG00010020202)	rnf19b (ENSSAUG00010020203)	ak2 (ENSSAUG00010020206)	ENSSAUG00010020211	ENSSAUG00010020218	ENSSAUG00010020221	ENSSAUG00010020224	ENSSAUG00010020228	pleca (ENSSAUG00010020503)	eif3eb (ENSSAUG00010026199)	TMEM74 (ENSSAUG00010026200)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	10	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Large yellow croaker	MODERN SPECIES	484	daxx (ENSLCRG00005007215)	zbtb22b (ENSLCRG00005007212)	kifc1 (ENSLCRG00005007024)	znf384a (ENSLCRG00005007021)	FLOT1 (ENSLCRG00005006989)	ENSLCRG00005006983	ENSLCRG00005006981	ENSLCRG00005006980	ENSLCRG00005006979	pvrl2l (ENSLCRG00005006976)	ENSLCRG00005006973	atp1a3a (ENSLCRG00005003311)	ENSLCRG00005003261 #24	erf (ENSLCRG00005003260) #21	ENSLCRG00005003257 #20	gsk3aa (ENSLCRG00005002629) #22	ENSLCRG00005002224	ENSLCRG00005002217	zgc:91910 (ENSLCRG00005002215)	bmp8a (ENSLCRG00005002213)	ENSLCRG00005001128	ndufs5 (ENSLCRG00005001104)	rnf19b (ENSLCRG00005001101)	AK2 (ENSLCRG00005001099)	ENSLCRG00005001097	ENSLCRG00005001092	ENSLCRG00005001089	ENSLCRG00005001074	ENSLCRG00005001054	sfpq (ENSLCRG00005001039)	lypla2 (ENSLCRG00005001033)
European seabass	MODERN SPECIES	22	daxx (ENSDLAG00005003443)	zbtb22b (ENSDLAG00005034491)	kifc1 (ENSDLAG00005002751)	ENSDLAG00005002571	ENSDLAG00005002327	ENSDLAG00005032027	ENSDLAG00005025329	ENSDLAG00005025327	pvrl2l (ENSDLAG00005030861)	ENSDLAG00005025325	atp1a3a (ENSDLAG00005023707)	ENSDLAG00005034879 #24	erf (ENSDLAG00005030685) #21	ENSDLAG00005030597 #20	bmp8a (ENSDLAG00005023518)	gsk3aa (ENSDLAG00005023537) #22	ENSDLAG00005015416	ndufs5 (ENSDLAG00005015202)	rnf19b (ENSDLAG00005015058)	ak2 (ENSDLAG00005015038)	ENSDLAG00005028709	ENSDLAG00005008775	ENSDLAG00005002337	ENSDLAG00005017123	ENSDLAG00005027767	ENSDLAG00005030462	ENSDLAG00005026904	ENSDLAG00005026857	ENSDLAG00005028692	ENSDLAG00005015030	ENSDLAG00005006120
Perciformes	ANCESTRAL SPECIES	11	ENSGT00940000157293	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Cottioidei	ANCESTRAL SPECIES	16	ENSGT00940000157293	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160668	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.b #24	ENSGT00940000157292.fc.a #21	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Stickleback	MODERN SPECIES	9	ENSGACG00000001932	ENSGACG00000001935	ENSGACG00000001937	ENSGACG00000001941	ENSGACG00000001944	psmb8a (ENSGACG00000001947)	atp1a3a (ENSGACG00000001959)	POU2F2 (ENSGACG00000001968) #24	ENSGACG00000001971	ENSGACG00000001973	ENSGACG00000001976	ENSGACG00000001978	ENSGACG00000001979	erf (ENSGACG00000001981) #21	ENSGACG00000001984	gsk3aa (ENSGACG00000001987) #22	zgc:91910 (ENSGACG00000001990)	bmp8a (ENSGACG00000001991)	MACF1 (ENSGACG00000001993)	ndufs5 (ENSGACG00000002002)	rnf19b (ENSGACG00000002003)	ak2 (ENSGACG00000002010)	zmym4.2 (ENSGACG00000002029)	sfpq (ENSGACG00000002034)	lypla2 (ENSGACG00000002050)	pithd1 (ENSGACG00000002074)	eloa (ENSGACG00000002085)	ENSGACG00000002089	rpl11 (ENSGACG00000002118)	ENSGACG00000002143	ENSGACG00000002175
Lumpfish	MODERN SPECIES	2	psmb13a (ENSCLMG00005006648)	psmb8a (ENSCLMG00005006654)	ENSCLMG00005006658	daxx (ENSCLMG00005006661)	hsd17b8 (ENSCLMG00005006662)	zbtb22b (ENSCLMG00005006664)	kifc1 (ENSCLMG00005006665)	znf384a (ENSCLMG00005006710)	FLOT1 (ENSCLMG00005006713)	ENSCLMG00005006832	ENSCLMG00005006834	atp1a3a (ENSCLMG00005006835)	ENSCLMG00005008457	ENSCLMG00005008458 #24	erf (ENSCLMG00005008460) #21	gsk3aa (ENSCLMG00005008464) #22	zgc:91910 (ENSCLMG00005008825)	ENSCLMG00005008827	bmp8a (ENSCLMG00005008831)	ndufs5 (ENSCLMG00005011008)	rnf19b (ENSCLMG00005011010)	ak2 (ENSCLMG00005011015)	ENSCLMG00005011017	ENSCLMG00005011021	ENSCLMG00005011026	sfpq (ENSCLMG00005011028)	lypla2 (ENSCLMG00005011029)	pithd1 (ENSCLMG00005011032)	eloa (ENSCLMG00005011035)	ENSCLMG00005011038	rpl11 (ENSCLMG00005011042)
Perciformes_a	ANCESTRAL SPECIES	14	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.d	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Channel bull blenny	MODERN SPECIES	2	ENSCGOG00000013015	daxx (ENSCGOG00000013025)	zbtb22b (ENSCGOG00000013032)	kifc1 (ENSCGOG00000013039)	znf384a (ENSCGOG00000013052)	FLOT1 (ENSCGOG00000013091)	ENSCGOG00000013817	ENSCGOG00000013843	ENSCGOG00000013844	pvrl2l (ENSCGOG00000013845)	atp1a3a (ENSCGOG00000013878)	ENSCGOG00000016320	ENSCGOG00000016328 #24	erf (ENSCGOG00000016330) #21	ENSCGOG00000016335 #20	gsk3aa (ENSCGOG00000016371) #22	zgc:91910 (ENSCGOG00000017147)	bmp8a (ENSCGOG00000017154)	ndufs5 (ENSCGOG00000017417)	rnf19b (ENSCGOG00000017418)	ak2 (ENSCGOG00000017476)	ENSCGOG00000017485	ENSCGOG00000017490	ENSCGOG00000017496	ENSCGOG00000017497	ENSCGOG00000017499	sfpq (ENSCGOG00000017504)	lypla2 (ENSCGOG00000017508)	pithd1 (ENSCGOG00000017509)	eloa (ENSCGOG00000017516)	ENSCGOG00000017522
Pike perch	MODERN SPECIES	13	psmb8a (ENSSLUG00000003790)	ENSSLUG00000003829	ENSSLUG00000003845	daxx (ENSSLUG00000003851)	zbtb22b (ENSSLUG00000003858)	kifc1 (ENSSLUG00000003894)	znf384a (ENSSLUG00000004172)	FLOT1 (ENSSLUG00000004212)	ENSSLUG00000004276	ENSSLUG00000004365	ENSSLUG00000004375	pvrl2l (ENSSLUG00000004388)	atp1a3a (ENSSLUG00000004721)	POU2F2 (ENSSLUG00000010480) #24	erf (ENSSLUG00000010506) #21	gsk3aa (ENSSLUG00000010522) #22	ENSSLUG00000010595	zgc:91910 (ENSSLUG00000010603)	bmp8a (ENSSLUG00000010619)	MACF1 (ENSSLUG00000011062)	ndufs5 (ENSSLUG00000022058)	rnf19b (ENSSLUG00000022064)	ak2 (ENSSLUG00000022083)	ENSSLUG00000022096	ENSSLUG00000022122	ENSSLUG00000022143	sfpq (ENSSLUG00000022159)	lypla2 (ENSSLUG00000022173)	pithd1 (ENSSLUG00000022186)	eloa (ENSSLUG00000022193)	ENSSLUG00000022202
Percomorphaceae_D	ANCESTRAL SPECIES	14	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Anabantaria	ANCESTRAL SPECIES	16	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Anabantoidei	ANCESTRAL SPECIES	19	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Climbing perch	MODERN SPECIES	2	ENSATEG00000023943	daxx (ENSATEG00000000045)	zbtb22b (ENSATEG00000025344)	kifc1 (ENSATEG00000000085)	ENSATEG00000000165	ENSATEG00000000170	ENSATEG00000000227	ENSATEG00000000490	ENSATEG00000029595	pvrl2l (ENSATEG00000000578)	atp1a3a (ENSATEG00000000592)	ENSATEG00000026160	ENSATEG00000000695 #24	erf (ENSATEG00000000769) #21	ENSATEG00000000778 #20	gsk3aa (ENSATEG00000000791) #22	ENSATEG00000000904	ENSATEG00000000806	zgc:91910 (ENSATEG00000028823)	bmp8a (ENSATEG00000000957)	ENSATEG00000001005	ENSATEG00000001381	ndufs5 (ENSATEG00000001532)	rnf19b (ENSATEG00000001545)	ak2 (ENSATEG00000001589)	ENSATEG00000028158	ENSATEG00000001623	ENSATEG00000001691	ENSATEG00000029002	ENSATEG00000027006	ENSATEG00000028252
Siamese fighting fish	MODERN SPECIES	2	daxx (ENSBSLG00000011135)	zbtb22b (ENSBSLG00000011132)	kifc1 (ENSBSLG00000011098)	znf384a (ENSBSLG00000011079)	FLOT1 (ENSBSLG00000010431)	ENSBSLG00000010415	ENSBSLG00000010408	pvrl2l (ENSBSLG00000010392)	atp1a3a (ENSBSLG00000009448)	ENSBSLG00000009402	ENSBSLG00000009399	atp1a3a (ENSBSLG00000008392)	POU2F2 (ENSBSLG00000023866) #24	erf (ENSBSLG00000023662) #21	ENSBSLG00000023657	gsk3aa (ENSBSLG00000023497) #22	zgc:91910 (ENSBSLG00000023416)	bmp8a (ENSBSLG00000023409)	tet3 (ENSBSLG00000020966)	ndufs5 (ENSBSLG00000020134)	rnf19b (ENSBSLG00000020112)	ak2 (ENSBSLG00000020093)	ENSBSLG00000020026	ENSBSLG00000019930	ENSBSLG00000019839	ENSBSLG00000019826	ENSBSLG00000019808	ENSBSLG00000019775	ENSBSLG00000019610	ENSBSLG00000019599	ENSBSLG00000019547
Zig-zag eel	MODERN SPECIES	2	ENSMAMG00000014198	ENSMAMG00000014125	daxx (ENSMAMG00000014117)	zbtb22b (ENSMAMG00000014110)	ENSMAMG00000014076	ENSMAMG00000014051	ENSMAMG00000014019	ENSMAMG00000013990	ENSMAMG00000013950	ENSMAMG00000013935	pvrl2l (ENSMAMG00000013923)	atp1a3a (ENSMAMG00000013885)	ENSMAMG00000013845 #24	erf (ENSMAMG00000028668) #21	ENSMAMG00000013677 #20	gsk3aa (ENSMAMG00000008820) #22	zgc:91910 (ENSMAMG00000008779)	bmp8a (ENSMAMG00000008412)	ENSMAMG00000008154	ndufs5 (ENSMAMG00000008133)	rnf19b (ENSMAMG00000008114)	ak2 (ENSMAMG00000008090)	ENSMAMG00000028477	ENSMAMG00000008032	ENSMAMG00000026484	ENSMAMG00000008020	ENSMAMG00000007896	ENSMAMG00000007875	lypla2 (ENSMAMG00000025034)	pithd1 (ENSMAMG00000007835)	eloa (ENSMAMG00000007814)
Carangaria	ANCESTRAL SPECIES	14	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000165604	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Pleuronectoidei	ANCESTRAL SPECIES	33	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000165604	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Turbot	MODERN SPECIES	14	zbtb22b (ENSSMAG00000017466)	kifc1 (ENSSMAG00000017488)	ENSSMAG00000017501	ENSSMAG00000017526	ENSSMAG00000017532	ENSSMAG00000021764	ENSSMAG00000017636	ENSSMAG00000036316	pvrl2l (ENSSMAG00000017670)	atp1a3a (ENSSMAG00000017704)	ENSSMAG00000025627	ENSSMAG00000017756 #24	ENSSMAG00000037027	erf (ENSSMAG00000017783) #21	ENSSMAG00000023814 #20	gsk3aa (ENSSMAG00000017795) #22	zgc:91910 (ENSSMAG00000017818)	bmp8a (ENSSMAG00000017833)	ENSSMAG00000017859	ndufs5 (ENSSMAG00000030854)	rnf19b (ENSSMAG00000018068)	ak2 (ENSSMAG00000018087)	ENSSMAG00000027141	ENSSMAG00000025203	ENSSMAG00000018107	ENSSMAG00000018201	lypla2 (ENSSMAG00000018219)	pithd1 (ENSSMAG00000018411)	eloa (ENSSMAG00000018421)	ENSSMAG00000018429	rpl11 (ENSSMAG00000018435)
Carangaria_A	ANCESTRAL SPECIES	16	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000173076	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Seriola	ANCESTRAL SPECIES	55	ENSGT00940000157244.a.a	ENSGT00940000160704.a.b	ENSGT00950000182894.D	ENSGT00990000203527.b	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197	ENSGT00910000144211
Greater amberjack	MODERN SPECIES	32	LMNA (ENSSDUG00000010404)	usf2 (ENSSDUG00000010364)	tekt2 (ENSSDUG00000010281)	ENSSDUG00000010271	znf384a (ENSSDUG00000010249)	FLOT1 (ENSSDUG00000010195)	ENSSDUG00000010165	ENSSDUG00000010137	ENSSDUG00000010121	pvrl2l (ENSSDUG00000010073)	ENSSDUG00000010047	atp1a3a (ENSSDUG00000009951)	POU2F2 (ENSSDUG00000009887) #24	erf (ENSSDUG00000009866) #21	ENSSDUG00000009813 #20	gsk3aa (ENSSDUG00000009791) #22	zgc:91910 (ENSSDUG00000009782)	bmp8a (ENSSDUG00000009769)	MACF1 (ENSSDUG00000008708)	ndufs5 (ENSSDUG00000008625)	rnf19b (ENSSDUG00000008598)	ak2 (ENSSDUG00000008585)	ENSSDUG00000008564	ENSSDUG00000008536	ENSSDUG00000008527	ENSSDUG00000008516	ENSSDUG00000008424	sfpq (ENSSDUG00000008402)	lypla2 (ENSSDUG00000008356)	pithd1 (ENSSDUG00000008323)	eloa (ENSSDUG00000008309)
Yellowtail amberjack	MODERN SPECIES	3241	LMNA (ENSSLDG00000016949)	usf2 (ENSSLDG00000016996)	tekt2 (ENSSLDG00000017055)	ENSSLDG00000017105	znf384a (ENSSLDG00000017138)	FLOT1 (ENSSLDG00000017227)	ENSSLDG00000017289	ENSSLDG00000017350	ENSSLDG00000017372	pvrl2l (ENSSLDG00000017428)	atp1a3a (ENSSLDG00000017447)	ENSSLDG00000017514	POU2F2 (ENSSLDG00000017542) #24	erf (ENSSLDG00000017593) #21	ENSSLDG00000017610 #20	gsk3aa (ENSSLDG00000017654) #22	bmp8a (ENSSLDG00000017680)	zgc:91910 (ENSSLDG00000017697)	MACF1 (ENSSLDG00000017880)	ndufs5 (ENSSLDG00000018701)	rnf19b (ENSSLDG00000018721)	ak2 (ENSSLDG00000018761)	ENSSLDG00000018789	ENSSLDG00000018812	ENSSLDG00000018849	ENSSLDG00000018866	sfpq (ENSSLDG00000018917)	lypla2 (ENSSLDG00000018948)	pithd1 (ENSSLDG00000018984)	eloa (ENSSLDG00000019007)	ENSSLDG00000019026
Barramundi perch	MODERN SPECIES	49	psmb8a (ENSLCAG00010020848)	ENSLCAG00010020861	ENSLCAG00010020868	daxx (ENSLCAG00010020876)	zbtb22b (ENSLCAG00010020883)	ENSLCAG00010020891	znf384a (ENSLCAG00010020905)	FLOT1 (ENSLCAG00010020922)	ENSLCAG00010020966	ENSLCAG00010020978	ENSLCAG00010020981	pvrl2l (ENSLCAG00010020984)	atp1a3a (ENSLCAG00010021181)	ENSLCAG00010022109 #24	erf (ENSLCAG00010022117) #21	gsk3aa (ENSLCAG00010022146) #22	ENSLCAG00010022214	ENSLCAG00010022216	zgc:91910 (ENSLCAG00010022218)	bmp8a (ENSLCAG00010022231)	ndufs5 (ENSLCAG00010022297)	rnf19b (ENSLCAG00010022306)	ak2 (ENSLCAG00010022315)	ENSLCAG00010022326	ENSLCAG00010022339
Ovalentaria	ANCESTRAL SPECIES	12	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00940000154370.c.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT01030000234921	ENSGT00940000155824.C.fc	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221
Atherinomorphae	ANCESTRAL SPECIES	12	ENSGT01100000263531.G.l.c.b.b.b.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT01030000234921	ENSGT00940000155824.C.fc	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197
Cyprinodontiformes	ANCESTRAL SPECIES	10	ENSGT01100000263531.G.l.c.b.b.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT01030000234921	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b	ENSGT00940000175963.C	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.b	ENSGT00940000166582.b	ENSGT01020000230590.b.b
Aplocheiloidei	ANCESTRAL SPECIES	42	ENSGT01100000263531.G.l.c.b.b.b.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000164565	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.b.a.b	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Mangrove rivulus	MODERN SPECIES	502															CIC (ENSKMAG00000010608) #20	gsk3aa (ENSKMAG00000010656) #22	bmp8a (ENSKMAG00000010688)	zgc:91910 (ENSKMAG00000010732)	ENSKMAG00000010761
Turquoise killifish	MODERN SPECIES	1628	OLA.21318 (ENSNFUG00015018964)	daxx (ENSNFUG00015018969)	zbtb22b (ENSNFUG00015018976)	kifc1 (ENSNFUG00015018986)	FLOT1 (ENSNFUG00015019402)	znf384a (ENSNFUG00015020357)	ENSNFUG00015020359	ENSNFUG00015020362	pvrl2l (ENSNFUG00015020368)	ENSNFUG00015020373	ENSNFUG00015020375	ENSNFUG00015020963	POU2F2 (ENSNFUG00015020967) #24	ENSNFUG00015020970	ENSNFUG00015020972	gsk3aa (ENSNFUG00015020978) #22	ZNF706 (ENSNFUG00015021012)	bmp8a (ENSNFUG00015021016)	ENSNFUG00015021052	NDUFS5 (ENSNFUG00015021442)	RNF19B (ENSNFUG00015021447)	ENSNFUG00015021473	AK2 (ENSNFUG00015021475)	ENSNFUG00015021487	ENSNFUG00015021491	ENSNFUG00015021494	ENSNFUG00015021505	sfpq (ENSNFUG00015021508)	ENSNFUG00015021516	lypla2 (ENSNFUG00015021525)	PITHD1 (ENSNFUG00015021569)
Cyprinodontoidei	ANCESTRAL SPECIES	31	ENSGT01100000263531.G.l.c.b.b.a.b.b.b.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT01030000234921	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b	ENSGT00940000175963.C.f	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.a.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.b	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a
NAME_4	ANCESTRAL SPECIES	228			ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576
Sheepshead minnow	MODERN SPECIES	396															erf (ENSCVAG00000020397) #21	gsk3aa (ENSCVAG00000020363) #22	zgc:91910 (ENSCVAG00000020314)	bmp8a (ENSCVAG00000020304)	ENSCVAG00000020289	ENSCVAG00000000728	ENSCVAG00000020027	ndufs5 (ENSCVAG00000019905)	rnf19b (ENSCVAG00000019893)	ak2 (ENSCVAG00000019854)	FHIP1A (ENSCVAG00000019816)
Mummichog	MODERN SPECIES	249												atp1a3a (ENSFHEG00000008134)	ENSFHEG00000008071	ENSFHEG00000008056 #24	erf (ENSFHEG00000008034) #21	gsk3aa (ENSFHEG00000008025) #22	zgc:91910 (ENSFHEG00000008017)	bmp8a (ENSFHEG00000008003)	ENSFHEG00000007949	ENSFHEG00000007930	ENSFHEG00000007916	ENSFHEG00000007905	ENSFHEG00000007860	ENSFHEG00000007813	ndufs5 (ENSFHEG00000007760)	rnf19b (ENSFHEG00000007747)	ak2 (ENSFHEG00000007717)	ENSFHEG00000007700
Poeciliinae	ANCESTRAL SPECIES	24	ENSGT01100000263531.G.l.c.b.b.a.b.b.b.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT01030000234921	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000175963.C.f	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.a	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a
Platyfish	MODERN SPECIES	4	daxx (ENSXMAG00000007090)	zbtb22b (ENSXMAG00000023888)	ENSXMAG00000016804	znf384a (ENSXMAG00000016787)	FLOT1 (ENSXMAG00000016758)	ENSXMAG00000022293	ENSXMAG00000016756	ENSXMAG00000025816	ENSXMAG00000021660	pvrl2l (ENSXMAG00000016750)	ENSXMAG00000023730	atp1a3a (ENSXMAG00000016625)	ENSXMAG00000025547 #24	erf (ENSXMAG00000029798) #21	ENSXMAG00000027403 #20	gsk3aa (ENSXMAG00000016562) #22	zgc:91910 (ENSXMAG00000016561)	bmp8a (ENSXMAG00000026462)	MACF1 (ENSXMAG00000016452)	ENSXMAG00000030072	ENSXMAG00000022908	ndufs5 (ENSXMAG00000025526)	rnf19b (ENSXMAG00000016438)	ak2 (ENSXMAG00000021412)	ENSXMAG00000024784	ENSXMAG00000026663	ENSXMAG00000024314	ENSXMAG00000030081	ENSXMAG00000026068	ENSXMAG00000028680	ENSXMAG00000026919
Poecilia	ANCESTRAL SPECIES	38	ENSGT01100000263531.G.l.c.b.b.a.b.b.b.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT01030000234921	ENSGT00940000165766	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.a.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.b	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197
NAME_6	ANCESTRAL SPECIES	247								ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000177056.b	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc.v	ENSGT01030000234921	ENSGT00940000155824.C.fc.w	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.a.b.b.a	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.b.b.b.a.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.a.a.a	ENSGT01030000234575.c.a.a.a.a.a.a.a.d.a.a.b.a.b.b.a.a
Sailfin molly	MODERN SPECIES	39											atp1a3a (ENSPLAG00000019535)	ENSPLAG00000019476	ENSPLAG00000019470 #24	erf (ENSPLAG00000019461) #21	ENSPLAG00000019452 #20	gsk3aa (ENSPLAG00000019421) #22	zgc:91910 (ENSPLAG00000019378)	bmp8a (ENSPLAG00000019368)	MACF1 (ENSPLAG00000019327)	ENSPLAG00000019186	ENSPLAG00000019181	ndufs5 (ENSPLAG00000019127)	rnf19b (ENSPLAG00000019122)	ak2 (ENSPLAG00000019101)	ENSPLAG00000019089	ENSPLAG00000019080	ENSPLAG00000019064	ENSPLAG00000019044	ENSPLAG00000018991	ENSPLAG00000018966	ENSPLAG00000018958
Amazon molly	MODERN SPECIES	362								ENSPFOG00000000053	ENSPFOG00000000057	TCF19 (ENSPFOG00000000061)	pvrl2l (ENSPFOG00000000064)	atp1a3a (ENSPFOG00000000071)	ENSPFOG00000000091 #24	erf (ENSPFOG00000000101) #21	ENSPFOG00000000116 #20	gsk3aa (ENSPFOG00000000141) #22	zgc:91910 (ENSPFOG00000000161)	bmp8a (ENSPFOG00000000162)	MACF1 (ENSPFOG00000000306)	ndufs5 (ENSPFOG00000002496)	rnf19b (ENSPFOG00000002522)	ak2 (ENSPFOG00000002672)	ENSPFOG00000002778	ENSPFOG00000021980	ENSPFOG00000002799	ENSPFOG00000023917	ENSPFOG00000023866	ENSPFOG00000002868	ENSPFOG00000003113	sfpq (ENSPFOG00000003127)	lypla2 (ENSPFOG00000003234)
Guppy	MODERN SPECIES	441	ENSPREG00000007953	ENSPREG00000007938	ENSPREG00000007926	ENSPREG00000007909	znf384a (ENSPREG00000007875)	ENSPREG00000007528	ENSPREG00000007438	ENSPREG00000007424	ENSPREG00000007405	pvrl2l (ENSPREG00000007363)	ENSPREG00000007337	atp1a3a (ENSPREG00000007235)	POU2F2 (ENSPREG00000007185) #24	erf (ENSPREG00000007159) #21	ENSPREG00000007125 #20	gsk3aa (ENSPREG00000007073) #22	zgc:91910 (ENSPREG00000007052)	bmp8a (ENSPREG00000006976)	ENSPREG00000006918	ENSPREG00000006893	ENSPREG00000006881	ENSPREG00000006848	ENSPREG00000006810	ENSPREG00000006797	ENSPREG00000006782	ndufs5 (ENSPREG00000006768)	rnf19b (ENSPREG00000006750)	ak2 (ENSPREG00000006722)	ENSPREG00000006702	ENSPREG00000006633	ENSPREG00000006570
Oryzias	ANCESTRAL SPECIES	23	ENSGT01100000263531.G.l.c.b.b.b.a.b	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00940000157292.gc #21	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT00940000155824.C.fc.l	ENSGT01030000234921	ENSGT00940000155824.C.fc.k.b	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000177548	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398
Oryzias_a	ANCESTRAL SPECIES	18	ENSGT00980000198488	ENSGT01100000263531.G.l.c.b.b.b.a.b.c.b.b	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT00940000159045	ENSGT00940000155008.C	ENSGT01030000234921	ENSGT00940000155824.C.fc.k.b	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000177548	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a
Japanese Medaka HdrR	MODERN SPECIES	2	zbtb22b (ENSORLG00000006852)	kifc1 (ENSORLG00000006878)	znf384a (ENSORLG00000006888)	ENSORLG00000006938	ENSORLG00000006948	ENSORLG00000006955	ENSORLG00000023720	ENSORLG00000024992	pvrl2l (ENSORLG00000006981)	ENSORLG00000023962	ENSORLG00000023890	atp1a3a (ENSORLG00000007036)	ENSORLG00000007050 #24	erf (ENSORLG00000007065) #21	ENSORLG00000007091 #20	gsk3aa (ENSORLG00000007102) #22	zgc:91910 (ENSORLG00000029720)	bmp8a (ENSORLG00000007124)	ENSORLG00000026542	ENSORLG00000026427	ENSORLG00000024918	ENSORLG00000024373	ENSORLG00000025786	ndufs5 (ENSORLG00000028137)	ENSORLG00000007363	ak2 (ENSORLG00000007388)	ENSORLG00000027563	ENSORLG00000030398	ENSORLG00000026715	ENSORLG00000030569	sfpq (ENSORLG00000007459)
Chinese medaka	MODERN SPECIES	740							kifc1 (ENSOSIG00000020282)	znf384a (ENSOSIG00000020295)	FLOT1 (ENSOSIG00000020303)	ENSOSIG00000003922	ENSOSIG00000003934	ENSOSIG00000003937	pvrl2l (ENSOSIG00000003946)	atp1a3a (ENSOSIG00000004150)	POU2F2 (ENSOSIG00000010958) #24	gsk3aa (ENSOSIG00000010961) #22	zgc:91910 (ENSOSIG00000012463)	bmp8a (ENSOSIG00000012464)
Oryzias_b	ANCESTRAL SPECIES	27	ENSGT01100000263531.G.l.c.b.b.b.a.b.a.b.b	ENSGT01100000263531.G.l.c.b.b.b.a.b.a.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b.c	ENSGT00940000177056.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc.k.a	ENSGT01030000234921	ENSGT00940000155824.C.fc.k.b	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000177548	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a
Javanese ricefish	MODERN SPECIES	2	daxx (ENSOJAG00000019368)	zbtb22b (ENSOJAG00000019354)	ENSOJAG00000019340	znf384a (ENSOJAG00000019330)	ENSOJAG00000019270	ENSOJAG00000019246	ENSOJAG00000019231	ENSOJAG00000019223	pvrl2l (ENSOJAG00000019213)	pvrl2l (ENSOJAG00000019174)	pvrl2l (ENSOJAG00000019148)	ENSOJAG00000019139	atp1a3a (ENSOJAG00000018239)	ENSOJAG00000018188 #24	ENSOJAG00000018143 #21	gsk3aa (ENSOJAG00000017982) #22	zgc:91910 (ENSOJAG00000017953)	bmp8a (ENSOJAG00000017919)	ndufs5 (ENSOJAG00000007571)	ENSOJAG00000007484	AK2 (ENSOJAG00000007468)	ENSOJAG00000007448	ENSOJAG00000007433	ENSOJAG00000006950	sfpq (ENSOJAG00000006800)	lypla2 (ENSOJAG00000006764)	pithd1 (ENSOJAG00000006737)	eloa (ENSOJAG00000006718)	ENSOJAG00000006619	rpl11 (ENSOJAG00000006550)	ENSOJAG00000006292
Indian medaka	MODERN SPECIES	3	col11a2 (ENSOMEG00000016833)	hsd17b8 (ENSOMEG00000016888)	brd2a (ENSOMEG00000016921)	ENSOMEG00000016942	tap2a (ENSOMEG00000017039)	psmb9a (ENSOMEG00000017066)	psmb12 (ENSOMEG00000017077)	psmb13a (ENSOMEG00000017102)	psmb8a (ENSOMEG00000017126)	ENSOMEG00000017142	pvrl2l (ENSOMEG00000017177)	ENSOMEG00000017189	atp1a3a (ENSOMEG00000017324)	POU2F2 (ENSOMEG00000017387) #24	erf (ENSOMEG00000017429) #21	gsk3aa (ENSOMEG00000017463) #22	zgc:91910 (ENSOMEG00000017473)	bmp8a (ENSOMEG00000017579)	ENSOMEG00000017609	ENSOMEG00000017629	ENSOMEG00000017642	ENSOMEG00000017669	ENSOMEG00000017691	ndufs5 (ENSOMEG00000017722)	rnf19b (ENSOMEG00000017763)	ak2 (ENSOMEG00000017810)	ENSOMEG00000017835	ENSOMEG00000017837	ENSOMEG00000000458	sfpq (ENSOMEG00000018020)	lypla2 (ENSOMEG00000018063)
Ovalentaria_B	ANCESTRAL SPECIES	15	ENSGT01100000263531.G.l.c.b.b	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000175963.B	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a	ENSGT00940000166582.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398	ENSGT00390000002428.a
Cichlidae	ANCESTRAL SPECIES	7	ENSGT01100000263531.G.l.c.b.b	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000175963.B	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197	ENSGT00490000043398
Pseudocrenilabrinae	ANCESTRAL SPECIES	12	ENSGT00940000165504.i.a	ENSGT00940000157293	ENSGT01100000263531.G.l.c.b.b.c.a.b.a.b.a	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT00940000175963.B	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a.a.b.a.a.b	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197.kb	ENSGT00490000043398
Nile tilapia	MODERN SPECIES	13	ENSONIG00000008403	daxx (ENSONIG00000008401)	ENSONIG00000031951	zbtb22b (ENSONIG00000004944)	znf384a (ENSONIG00000004947)	FLOT1 (ENSONIG00000004950)	ENSONIG00000039016	ENSONIG00000004956	ENSONIG00000004957	pvrl2l (ENSONIG00000004958)	atp1a3a (ENSONIG00000038668)	POU2F2 (ENSONIG00000004972) #24	erf (ENSONIG00000004977) #21	ENSONIG00000031753	ENSONIG00000004979 #20	gsk3aa (ENSONIG00000004984) #22	zgc:91910 (ENSONIG00000004987)	bmp8a (ENSONIG00000004988)	ndufs5 (ENSONIG00000034893)	rnf19b (ENSONIG00000005016)	ak2 (ENSONIG00000005021)	ENSONIG00000005031	ENSONIG00000005036	ENSONIG00000005029	ENSONIG00000017729	ENSONIG00000036583	ENSONIG00000005034	ENSONIG00000038298	ENSONIG00000024244	ENSONIG00000042698	ENSONIG00000040040
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	9	ENSGT00940000165504.i.b	ENSGT00940000157293	ENSGT01100000263531.G.l.c.b.b.c.a.b.a.b.a	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a.a.b.a.a.b	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197.kb	ENSGT00490000043398
Haplochromini	ANCESTRAL SPECIES	5	ENSGT00940000159897.ib	ENSGT00940000165375.s	ENSGT00940000165504.i.a	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT01070000256736	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a.a.b.a.a.b	ENSGT00940000166582.b	ENSGT01020000230590.b.b	ENSGT00940000166582.a	ENSGT00940000156221	ENSGT00940000156197.kb	ENSGT00490000043398
Burton s mouthbrooder	MODERN SPECIES	718														erf (ENSHBUG00000016127) #21	ENSHBUG00000016139 #20	gsk3aa (ENSHBUG00000016155) #22	ENSHBUG00000016166	zgc:91910 (ENSHBUG00000016179)	bmp8a (ENSHBUG00000016203)	MACF1 (ENSHBUG00000016451)	ndufs5 (ENSHBUG00000016491)	rnf19b (ENSHBUG00000016529)	ENSHBUG00000016551
Haplochromini_A	ANCESTRAL SPECIES	5	ENSGT00940000159200	ENSGT00390000009448	ENSGT01100000263489.a.a.b.a.a.b.a.a.a.b.b.d	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a.a.b.a.a.b	ENSGT00940000166582.b	ENSGT00940000166582.a.b	ENSGT00940000156221	ENSGT00940000156197.kb	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
P. nyererei	MODERN SPECIES	668															ENSPNYG00000009738 #20	gsk3aa (ENSPNYG00000009723) #22	zgc:91910 (ENSPNYG00000009718)	bmp8a (ENSPNYG00000009694)	MACF1 (ENSPNYG00000009457)	ndufs5 (ENSPNYG00000009421)	rnf19b (ENSPNYG00000009371)	ak2 (ENSPNYG00000009320)
Haplochromini_B	ANCESTRAL SPECIES	1	ENSGT00940000159200	ENSGT00390000009448	ENSGT01100000263489.a.a.b.a.a.b.a.a.a.b.b.d	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.b.b.a.b	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a.a.a.b.a.a.a.a	ENSGT00940000166582.b	ENSGT00940000166582.a.b	ENSGT00940000156221	ENSGT00940000156197.kb	ENSGT00490000043398	ENSGT00390000002428.a	ENSGT00940000166197
Zebra mbuna	MODERN SPECIES	1104	ENSMZEG00005025962	daxx (ENSMZEG00005025963)	ENSMZEG00005025965	zbtb22b (ENSMZEG00005025966)	kifc1 (ENSMZEG00005025968)	znf384a (ENSMZEG00005025974)	FLOT1 (ENSMZEG00005025977)	ENSMZEG00005025981	ENSMZEG00005025982	ENSMZEG00005025983	pvrl2l (ENSMZEG00005025988)	atp1a3a (ENSMZEG00005025994)	POU2F2 (ENSMZEG00005026000) #24	erf (ENSMZEG00005026002) #21	ENSMZEG00005026004 #20	gsk3aa (ENSMZEG00005026006) #22	zgc:91910 (ENSMZEG00005026007)	bmp8a (ENSMZEG00005026011)	MACF1 (ENSMZEG00005026016)	ENSMZEG00005026028	ndufs5 (ENSMZEG00005026029)	rnf19b (ENSMZEG00005026030)	ak2 (ENSMZEG00005026032)	ENSMZEG00005026034	ENSMZEG00005026035	ENSMZEG00005026037	ENSMZEG00005026039	ENSMZEG00005026042	ENSMZEG00005026045	ENSMZEG00005026047	ENSMZEG00005026050
Eastern happy	MODERN SPECIES	13	ENSACLG00000020333	ENSACLG00000020357	zbtb22b (ENSACLG00000020367)	kifc1 (ENSACLG00000020375)	znf384a (ENSACLG00000020430)	FLOT1 (ENSACLG00000020490)	ENSACLG00000020527	ENSACLG00000020542	ENSACLG00000020554	pvrl2l (ENSACLG00000020652)	atp1a3a (ENSACLG00000020738)	ENSACLG00000020815 #24	erf (ENSACLG00000020943) #21	ENSACLG00000020957	ENSACLG00000020966 #20	gsk3aa (ENSACLG00000021016) #22	ENSACLG00000021046	bmp8a (ENSACLG00000021063)	MACF1 (ENSACLG00000021175)	ndufs5 (ENSACLG00000021387)	rnf19b (ENSACLG00000021392)	ak2 (ENSACLG00000021427)	ENSACLG00000021458	ENSACLG00000021683	ENSACLG00000021761	ENSACLG00000021772	ENSACLG00000021788	ENSACLG00000021804	ENSACLG00000021833	ENSACLG00000021851	ENSACLG00000021868
Lyretail cichlid	MODERN SPECIES	322	ENSNBRG00000019055	ENSNBRG00000019042	daxx (ENSNBRG00000019025)	ENSNBRG00000019004	ENSNBRG00000018993	zbtb22b (ENSNBRG00000018972)	znf384a (ENSNBRG00000018927)	FLOT1 (ENSNBRG00000018870)	ENSNBRG00000018833	ENSNBRG00000018794	pvrl2l (ENSNBRG00000018730)	atp1a3a (ENSNBRG00000018647)	POU2F2 (ENSNBRG00000018561) #24	erf (ENSNBRG00000018540) #21	ENSNBRG00000018520 #20	gsk3aa (ENSNBRG00000018311) #22	zgc:91910 (ENSNBRG00000018257)	bmp8a (ENSNBRG00000018242)	ENSNBRG00000018202	ENSNBRG00000018176	ENSNBRG00000018138	ndufs5 (ENSNBRG00000018117)	rnf19b (ENSNBRG00000018091)	ak2 (ENSNBRG00000018011)	ENSNBRG00000017986	ENSNBRG00000017975	ENSNBRG00000017939	ENSNBRG00000017921	ENSNBRG00000017856	ENSNBRG00000017811	ENSNBRG00000017732
Midas cichlid	MODERN SPECIES	1269			zbtb22b (ENSACIG00000023537)	kifc1 (ENSACIG00000023528)	znf384a (ENSACIG00000023513)	FLOT1 (ENSACIG00000023502)	ENSACIG00000023485	ENSACIG00000023478	ENSACIG00000023476	pvrl2l (ENSACIG00000023459)	ENSACIG00000023452	ATP1A3 (ENSACIG00000023442) #28	ENSACIG00000023435 #24	erf (ENSACIG00000023421) #21	ENSACIG00000023413 #20	gsk3aa (ENSACIG00000023401) #22	zgc:91910 (ENSACIG00000023394)	bmp8a (ENSACIG00000023373)	ENSACIG00000023365	MACF1 (ENSACIG00000023325)	ndufs5 (ENSACIG00000023310)	rnf19b (ENSACIG00000023300)	ak2 (ENSACIG00000023295)
Pomacentridae	ANCESTRAL SPECIES	88	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a	ENSGT00940000166582.b	ENSGT00940000165604	ENSGT00940000166582.a
Pomacentridae_A	ANCESTRAL SPECIES	73	ENSGT01100000263531.G.l.c.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00940000154370.c.a	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272	ENSGT00980000198642	ENSGT01030000234921	ENSGT00940000155824.C.fc	ENSGT00390000002919	ENSGT00940000158451	ENSGT00940000154576	ENSGT01030000234575.c.a.a.a.a.a.a.a.d	ENSGT01030000234575.c.a.a.a.a.a.a.a.c.a	ENSGT00940000166582.b	ENSGT00940000165604	ENSGT00940000166582.a
Amphiprion	ANCESTRAL SPECIES	107	ENSGT00940000157293.e	ENSGT01100000263475.g.b.i.b.b.a.a.p.a.a.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00390000003465.b.a	ENSGT00940000155272.nc
Clown anemonefish	MODERN SPECIES	3505									p4ha2 (ENSAOCG00000003785)	ENSAOCG00000003807	JAKMIP2 (ENSAOCG00000003821)	atp1a3a (ENSAOCG00000003841)	POU2F2 (ENSAOCG00000003863) #24	erf (ENSAOCG00000003878) #21	ENSAOCG00000003908 #20	gsk3aa (ENSAOCG00000003929) #22	zgc:91910 (ENSAOCG00000003942)	bmp8a (ENSAOCG00000003951)
Orange clownfish	MODERN SPECIES	8	zbtb22b (ENSAPEG00000014716)	kifc1 (ENSAPEG00000014745)	znf384a (ENSAPEG00000014757)	FLOT1 (ENSAPEG00000014780)	ENSAPEG00000014834	ENSAPEG00000014863	ENSAPEG00000014920	pvrl2l (ENSAPEG00000015012)	ENSAPEG00000015035	atp1a3a (ENSAPEG00000015148)	ENSAPEG00000015220 #24	erf (ENSAPEG00000015238) #21	ENSAPEG00000015275 #20	bmp8a (ENSAPEG00000015295)	zgc:91910 (ENSAPEG00000015322)	gsk3aa (ENSAPEG00000015335) #22	zgc:91910 (ENSAPEG00000015380)	bmp8a (ENSAPEG00000015406)	MACF1 (ENSAPEG00000015486)	ndufs5 (ENSAPEG00000015771)	rnf19b (ENSAPEG00000015788)	ak2 (ENSAPEG00000015837)	ENSAPEG00000015874	ENSAPEG00000015910	ENSAPEG00000015937	ENSAPEG00000015956	ENSAPEG00000016035	ENSAPEG00000016056	slc9a1b (ENSAPEG00000016089)	ENSAPEG00000016144	srsf10b (ENSAPEG00000016149)
Spiny chromis	MODERN SPECIES	304												atp1a3a (ENSAPOG00000021639)	POU2F2 (ENSAPOG00000021517) #24	erf (ENSAPOG00000021495) #21	ENSAPOG00000021480 #20	gsk3aa (ENSAPOG00000021424) #22	zgc:91910 (ENSAPOG00000021396)	bmp8a (ENSAPOG00000021375)	ENSAPOG00000021361
Bicolor damselfish	MODERN SPECIES	845												atp1a3a (ENSSPAG00000006829)	ENSSPAG00000006913 #24	erf (ENSSPAG00000006952) #21	ENSSPAG00000006994 #20	gsk3aa (ENSSPAG00000007044) #22	zgc:91910 (ENSSPAG00000007063)
Tiger tail seahorse	MODERN SPECIES	231	eif3eb (ENSHCOG00000005454)	TMEM74 (ENSHCOG00000000174)	trhrb (ENSHCOG00000005470)	nudcd1 (ENSHCOG00000005482)	ENY2 (ENSHCOG00000005492)	pkhd1l1.2 (ENSHCOG00000005771)	gdf6b (ENSHCOG00000005806)	ints8 (ENSHCOG00000005873)	DPY19L4 (ENSHCOG00000005924)	KDM1B (ENSHCOG00000005944)	ENSHCOG00000005981	ATP1A3 (ENSHCOG00000006012) #28	ENSHCOG00000006040 #24	erf (ENSHCOG00000006051) #21	ENSHCOG00000006058 #20	gsk3aa (ENSHCOG00000006072) #22	ENSHCOG00000006077
Pinecone sodierfish	MODERN SPECIES	2	ENSMMDG00005012085	ENSMMDG00005012117	ENSMMDG00005012126	daxx (ENSMMDG00005012165)	zbtb22b (ENSMMDG00005012167)	kifc1 (ENSMMDG00005012171)	znf384a (ENSMMDG00005012182)	ENSMMDG00005012187	ENSMMDG00005012200	ENSMMDG00005012202	ENSMMDG00005012207	pvrl2l (ENSMMDG00005012212)	atp1a3a (ENSMMDG00005012227)	POU2F2 (ENSMMDG00005012295) #24	erf (ENSMMDG00005012298) #21	gsk3aa (ENSMMDG00005012305) #22	ENSMMDG00005012938	ENSMMDG00005013292	ENSMMDG00005013295	ENSMMDG00005013300	ENSMMDG00005013301	ENSMMDG00005013303	ENSMMDG00005013308	ENSMMDG00005013327	ENSMMDG00005013331	zgc:91910 (ENSMMDG00005013336)	bmp8a (ENSMMDG00005013339)	MACF1 (ENSMMDG00005013398)	ndufs5 (ENSMMDG00005014251)	rnf19b (ENSMMDG00005014254)	ak2 (ENSMMDG00005014261)
Cod	MODERN SPECIES	14	daxx (ENSGMOG00000031195)	zbtb22b (ENSGMOG00000031990)	kifc1 (ENSGMOG00000019272)	ENSGMOG00000026046	ENSGMOG00000027193	ENSGMOG00000018128	ENSGMOG00000025218	ENSGMOG00000030399	ENSGMOG00000037076	ENSGMOG00000023679	ENSGMOG00000027639	ENSGMOG00000032533	ENSGMOG00000024236	ENSGMOG00000025822	ENSGMOG00000022456	ENSGMOG00000019602 #22	ZDHHC3 (ENSGMOG00000007940)	exosc7 (ENSGMOG00000007935)	CLEC3B (ENSGMOG00000007934)	ENSGMOG00000007926	ENSGMOG00000015153	ENSGMOG00000037226	ENSGMOG00000015171	ENSGMOG00000015195	ENSGMOG00000015218	ENSGMOG00000015230	ENSGMOG00000015746	ENSGMOG00000002367	ENSGMOG00000023361	sdc2 (ENSGMOG00000030187)	angpt1 (ENSGMOG00000002740)
Protacanthopterygii	ANCESTRAL SPECIES		ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000173076	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.b.e	ENSGT00940000177056	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000161799 #26	ENSGT00940000158852.d #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.b.k	ENSGT00940000155088.b.a.a	ENSGT00400000022326.b.a.b.b.a.b	ENSGT00940000164382.b.a	ENSGT00510000046803.b.a.b	ENSGT00940000153298.i.b	ENSGT00940000159033.n	ENSGT00950000183106.a.b.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	535	ENSGT00940000159200.f	ENSGT00390000009448.s	ENSGT00940000160991.a.n.b	ENSGT00940000164565	ENSGT00940000156904.a.a.m	ENSGT00560000077232.A.b.o.b	ENSGT00940000154370.d.a.a	ENSGT00390000005284.a.h	ENSGT00390000015391.c	ENSGT00940000165364.a.b.b	ENSGT00940000165134.a.b.e.b	ENSGT00940000177056	ENSGT00940000160115.a.b.a #24	ENSGT00940000157292.fc.a.b #21	ENSGT00940000159960.c.f #20	ENSGT00520000055635.c.b.a.a #22	ENSGT01100000263568.b.a.c.b.a.a.b.b
Salmoninae_a	ANCESTRAL SPECIES	48	ENSGT00940000159200.f	ENSGT00390000009448.s	ENSGT00940000160991.a.n.b	ENSGT00940000164565	ENSGT00940000156904.a.a.m	ENSGT00560000077232.A.b.o.b	ENSGT00940000154370.d.a.a	ENSGT00390000005284.a.h	ENSGT00390000015391.c	ENSGT00940000165364.a.b.b	ENSGT00940000165134.a.b.e.b	ENSGT00940000177056	ENSGT00940000160115.a.b.a #24	ENSGT00940000157292.fc.a.b #21	ENSGT00940000159960.c.f #20	ENSGT00520000055635.c.b.a.a #22	ENSGT01100000263568.b.a.c.b.a.a.b.b.a	ENSGT00940000161799 #26	ENSGT00940000158852.d.b.a #27	ENSGT01100000263479.I.b.d ##13	ENSGT01030000234575.c.a.a.b.f	ENSGT01000000214413.b.a.b.a.b.b	ENSGT00390000013354.b.b.d	ENSGT00950000182805.a.a.b.a.c.b.d	ENSGT00940000153675.a.a.a.a.b.k.b	ENSGT00940000155088.b.a.a.e.b	ENSGT00400000022326.b.a.b.b.a.b.b	ENSGT01050000246012.a	ENSGT01100000263533.b.a.a.a.b.a.a	ENSGT00940000164382.b.a.b	ENSGT00510000046803.b.a.b.c
Salmo	ANCESTRAL SPECIES	2	ENSGT00940000159200.f	ENSGT00390000009448.s	ENSGT00940000160991.a.n.b	ENSGT00940000164565.a	ENSGT00940000156904.a.a.m	ENSGT00560000077232.A.b.o.b	ENSGT00940000154370.d.a.a	ENSGT00390000005284.a.h	ENSGT00390000015391.c	ENSGT00940000165364.a.b.b	ENSGT00940000165134.a.b.e.b	ENSGT00940000177056	ENSGT00940000160115.a.b.a #24	ENSGT00940000157292.fc.a.b #21	ENSGT00940000159960.c.f #20	ENSGT00520000055635.c.b.a.a #22	ENSGT01100000263568.b.a.c.b.a.a.b.b.a	ENSGT00940000166708.r	ENSGT00940000158852.d.b.a #27	ENSGT01100000263479.I.b.d ##13	ENSGT01030000234575.c.a.a.b.f	ENSGT01000000214413.b.a.b.a.b.b	ENSGT00390000013354.b.b.d	ENSGT00950000182805.a.a.b.a.c.b.d	ENSGT00940000153675.a.a.a.a.b.k.b	ENSGT00940000155088.b.a.a.e.b	ENSGT01100000263533.b.a.a.a.b.a.a	ENSGT00940000164382.b.a.b	ENSGT00510000046803.b.a.b.c	ENSGT00940000153298.i.b.b.a.b	ENSGT00940000153298.i.b.a.a
River trout	MODERN SPECIES	29	zbtb22b (ENSSTUG00000022185)	ENSSTUG00000022192	znf384a (ENSSTUG00000022253)	ENSSTUG00000022308	ENSSTUG00000022425	ENSSTUG00000022427	ENSSTUG00000022432	ENSSTUG00000022436	pvrl2l (ENSSTUG00000022441)	ENSSTUG00000022494	ENSSTUG00000022535	ENSSTUG00000024062	POU2F2 (ENSSTUG00000024074) #24	erf (ENSSTUG00000024152) #21	ENSSTUG00000024169 #20	gsk3aa (ENSSTUG00000024233) #22	ENSSTUG00000024271	ENSSTUG00000024283	GRIK5 (ENSSTUG00000024354) #27	ENSSTUG00000024500 ##13	zgc:174904 (ENSSTUG00000024517)	gnb3b (ENSSTUG00000024538)	tpi1a (ENSSTUG00000024575)	eno2 (ENSSTUG00000024605)	ENSSTUG00000024695	chd4a (ENSSTUG00000024836)	ENSSTUG00000027936	ENSSTUG00000027940	ENSSTUG00000027952	vamp1a (ENSSTUG00000027961)	IFFO1 (ENSSTUG00000027984)
Atlantic salmon	MODERN SPECIES	5	ENSSSAG00000040723	DAXX (ENSSSAG00000040701)	zbtb22b (ENSSSAG00000040686)	ENSSSAG00000040389	znf384a (ENSSSAG00000077314)	ENSSSAG00000039396	tbb5 (ENSSSAG00000039318)	ENSSSAG00000039288	ENSSSAG00000039260	pvrl2l (ENSSSAG00000075699)	ENSSSAG00000075697	ENSSSAG00000075009	ENSSSAG00000074913 #24	ENSSSAG00000074904	ENSSSAG00000074899 #20	gsk3aa (ENSSSAG00000074433) #22	ENSSSAG00000108670	ENSSSAG00000074408 #26	ENSSSAG00000074232 #27	ENSSSAG00000086881 ##13	ENSSSAG00000074205	gnb3b (ENSSSAG00000074198)	tpi1a (ENSSSAG00000074195)	enog (ENSSSAG00000074139)	CDC42 (ENSSSAG00000113384)	chd4a (ENSSSAG00000073889)	ENSSSAG00000073862	vamp1a (ENSSSAG00000073860)	ENSSSAG00000073838	ENSSSAG00000073832	ENSSSAG00000073639
Oncorhynchus	ANCESTRAL SPECIES	40	ENSGT01100000263531.G.m.a.b.a	ENSGT00940000159200.f	ENSGT00390000009448.s	ENSGT00940000160991.a.n.b	ENSGT00940000156904.a.a.m	ENSGT00560000077232.A.b.o.b	ENSGT00940000154370.d.a.a	ENSGT00390000005284.a.h	ENSGT00390000015391.c	ENSGT00940000165364.a.b.b	ENSGT00940000165134.a.b.e.b	ENSGT00940000177056	ENSGT00940000160115.a.b.a #24	ENSGT00940000157292.fc.a.b #21	ENSGT00940000159960.c.f #20	ENSGT00520000055635.c.b.a.a #22	ENSGT01100000263568.b.a.c.b.a.a.b.b.a	ENSGT00940000166708.p	ENSGT00940000158852.d.b.a #27	ENSGT01100000263479.I.b.d ##13	ENSGT01030000234575.c.a.a.b.f	ENSGT01000000214413.b.a.b.a.b.b	ENSGT00390000013354.b.b.d	ENSGT00950000182805.a.a.b.a.c.b.d	ENSGT00940000153675.a.a.a.a.b.k.b	ENSGT00940000155088.b.a.a.e.b	ENSGT00400000022326.b.a.b.b.a.b.b	ENSGT01050000246012.a	ENSGT01100000263533.b.a.a.a.b.a.a	ENSGT00940000164382.b.a.b	ENSGT00510000046803.b.a.b.c
Oncorhynchus_a	ANCESTRAL SPECIES	45	ENSGT01100000263475.g.b	ENSGT01100000263531.G.m.a.b.a	ENSGT00940000159200.f	ENSGT00390000009448.s	ENSGT00940000160991.a.n.b	ENSGT00940000156904.a.a.m	ENSGT00560000077232.A.b.o.b	ENSGT00940000154370.d.a.a	ENSGT00390000005284.a.h	ENSGT00390000015391.c	ENSGT00940000165364.a.b.b	ENSGT00940000165134.a.b.e.b	ENSGT00940000177056	ENSGT00940000160115.a.b.a #24	ENSGT00940000157292.fc.a.b #21	ENSGT00520000055635.c.b.a.a #22	ENSGT01100000263568.b.a.c.b.a.a.b.b.a	ENSGT00940000166708.p	ENSGT00940000158852.d.b.a #27	ENSGT01100000263479.I.b.d ##13	ENSGT01030000234575.c.a.a.b.f	ENSGT01000000214413.b.a.b.a.b.b	ENSGT00390000013354.b.b.d	ENSGT00950000182805.a.a.b.a.c.b.d	ENSGT00940000153675.a.a.a.a.b.k.b	ENSGT00940000155088.b.a.a.e.b	ENSGT00400000022326.b.a.b.b.a.b.b	ENSGT01050000246012.a	ENSGT00940000159960.c.f #20	ENSGT01100000263533.b.a.a.a.b.a.a	ENSGT00940000164382.b.a.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	24	ENSOTSG00005023200	ENSOTSG00005023201	ENSOTSG00005023204	daxx (ENSOTSG00005023205)	zbtb22b (ENSOTSG00005023206)	znf384a (ENSOTSG00005023207)	ENSOTSG00005023208	ENSOTSG00005023306	ENSOTSG00005023307	ENSOTSG00005023308	pvrl2l (ENSOTSG00005023309)	ENSOTSG00005023324	ENSOTSG00005023808	POU2F2 (ENSOTSG00005023809) #24	erf (ENSOTSG00005023811) #21	gsk3aa (ENSOTSG00005023812) #22	ENSOTSG00005023814	GRIK5 (ENSOTSG00005023815) #27	ENSOTSG00005023816 ##13	zgc:174904 (ENSOTSG00005023817)	gnb3b (ENSOTSG00005002982)	tpi1a (ENSOTSG00005002996)	eno2 (ENSOTSG00005003043)	cdc42l (ENSOTSG00005003670)	chd4a (ENSOTSG00005003854)	ENSOTSG00005020235	vamp1a (ENSOTSG00005020239)	IFFO1 (ENSOTSG00005020252)	ing4 (ENSOTSG00005020409)	ENSOTSG00005020411	ENSOTSG00005020412
Chinook salmon	MODERN SPECIES	45	ENSOTSG00005045428	ENSOTSG00005045427	ENSOTSG00005045426	daxx (ENSOTSG00005045425)	zbtb22b (ENSOTSG00005045424)	znf384a (ENSOTSG00005045423)	FLOT1 (ENSOTSG00005045408)	ENSOTSG00005045406	ENSOTSG00005045404	ENSOTSG00005045402	pvrl2l (ENSOTSG00005045400)	ENSOTSG00005045350	POU2F2 (ENSOTSG00005045349) #24	erf (ENSOTSG00005045348) #21	ENSOTSG00005045346 #20	gsk3aa (ENSOTSG00005045343) #22	ENSOTSG00005045342	GRIK5 (ENSOTSG00005045340) #27	ENSOTSG00005045337 ##13	zgc:174904 (ENSOTSG00005045336)	gnb3b (ENSOTSG00005045335)	tpi1a (ENSOTSG00005045334)	eno2 (ENSOTSG00005045200)	cdc42l (ENSOTSG00005045199)	chd4a (ENSOTSG00005036824)	ENSOTSG00005036801	IFFO1 (ENSOTSG00005036791)	ing4 (ENSOTSG00005036787)	ENSOTSG00005036786	ENSOTSG00005036785	ENSOTSG00005036764
Coho salmon	MODERN SPECIES	5	ENSOKIG00005022206	ENSOKIG00005022169	daxx (ENSOKIG00005022143)	zbtb22b (ENSOKIG00005022131)	znf384a (ENSOKIG00005022098)	FLOT1 (ENSOKIG00005021982)	ENSOKIG00005021956	ENSOKIG00005021949	ENSOKIG00005021941	pvrl2l (ENSOKIG00005021917)	ENSOKIG00005021310	POU2F2 (ENSOKIG00005021189) #24	ENSOKIG00005021175	erf (ENSOKIG00005021168) #21	ENSOKIG00005021156 #20	gsk3aa (ENSOKIG00005021012) #22	ENSOKIG00005020963	ENSOKIG00005020917	GRIK5 (ENSOKIG00005020072) #27	ENSOKIG00005019991 ##13	ENSOKIG00005019967	gnb3b (ENSOKIG00005019956)	tpi1a (ENSOKIG00005019895)	ENSOKIG00005019885	eno2 (ENSOKIG00005019807)	ENSOKIG00005019769	chd4a (ENSOKIG00005017787)	ENSOKIG00005017624	ENSOKIG00005017616	ENSOKIG00005017588	vamp1a (ENSOKIG00005017578)
Rainbow trout	MODERN SPECIES	24	Onmy-UEA (ENSOMYG00000025251)	ENSOMYG00000025425	daxx (ENSOMYG00000025553)	zbtb22b (ENSOMYG00000025575)	znf384a (ENSOMYG00000025586)	ENSOMYG00000025700	ENSOMYG00000060737	ENSOMYG00000025969	ENSOMYG00000025977	pvrl2l (ENSOMYG00000025991)	ENSOMYG00000049286	ENSOMYG00000026021	ENSOMYG00000026058 #24	erf (ENSOMYG00000059038) #21	ENSOMYG00000026103 #20	gsk3aa (ENSOMYG00000026153) #22	ENSOMYG00000026227	ENSOMYG00000026250 #26	ENSOMYG00000026360 #27	ENSOMYG00000026537 ##13	zgc:174904 (ENSOMYG00000026548)	gnb3b (ENSOMYG00000052956)	tpi1a (ENSOMYG00000026581)	eno2 (ENSOMYG00000026831)	ENSOMYG00000046676	chd4a (ENSOMYG00000028964)	ENSOMYG00000023806	ENSOMYG00000052949	ENSOMYG00000039188	vamp1a (ENSOMYG00000052501)	ENSOMYG00000039216
Huchen	MODERN SPECIES	1631												ENSHHUG00000046394 #24	erf (ENSHHUG00000046400) #21	ENSHHUG00000046407 #20	ENSHHUG00000046411 #20	gsk3aa (ENSHHUG00000046434) #22	ENSHHUG00000046530	ENSHHUG00000046533	ENSHHUG00000046538 #27
Salmoninae	ANCESTRAL SPECIES	93	ENSGT01100000263531.G.m.b.b	ENSGT00940000159200.e	ENSGT00390000009448.t	ENSGT00940000160991.a.n.a	ENSGT00940000161735	ENSGT00940000156904.a.a.n	ENSGT00560000077232.A.b.o.a	ENSGT00940000154370.d.b	ENSGT00390000005284.a.g	ENSGT00390000015391.d	ENSGT00940000165364.a.b.a	ENSGT00940000165134.a.b.e.a	ENSGT00940000160115.a.b.b #24	ENSGT00940000157292.fc.a.a #21	ENSGT00940000159960.c.e #20	ENSGT00520000055635.c.b.a.b #22	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b	ENSGT00940000158852.d.b.b #27	ENSGT01100000263479.I.b.c ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b.a	ENSGT00390000013354.b.b.c	ENSGT00950000182805.a.a.b.a.c.b.c	ENSGT00940000153675.a.a.a.a.b.k.a	ENSGT00940000155088.b.a.a.e.a
Salmoninae_a	ANCESTRAL SPECIES	5	ENSGT00940000159200.e	ENSGT00390000009448.t	ENSGT00940000160991.a.n.a	ENSGT00940000161735	ENSGT00940000156904.a.a.n	ENSGT00560000077232.A.b.o.a	ENSGT00940000154370.d.b.c.a	ENSGT00940000154370.d.a.b	ENSGT00390000005284.a.g	ENSGT00390000015391.d	ENSGT00940000165364.a.b.a	ENSGT00940000165134.a.b.e.a	ENSGT00940000160115.a.b.b #24	ENSGT00940000157292.fc.a.a #21	ENSGT00940000159960.c.e #20	ENSGT00520000055635.c.b.a.b #22	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b	ENSGT00940000158852.d.b.b #27	ENSGT01100000263479.I.b.c ##13	ENSGT01030000234575.c.a.a.b.e	ENSGT01000000214413.b.a.b.a.b.a	ENSGT00390000013354.b.b.c	ENSGT00950000182805.a.a.b.a.c.b.c	ENSGT00940000153675.a.a.a.a.b.k.a	ENSGT00940000155088.b.a.a.e.a	ENSGT01100000263533.b.a.a.a.b.a.b	ENSGT00400000022326.b.a.b.b.a.b.a	ENSGT00940000164382.b.a.a	ENSGT00510000046803.b.a.b.d	ENSGT00940000153298.i.b.b.a.a	ENSGT00940000153298.i.b.a.b
Oncorhynchus	ANCESTRAL SPECIES	16	ENSGT01100000263531.G.m.a.b.b.b	ENSGT00940000159200.e	ENSGT00390000009448.t	ENSGT00940000160991.a.n.a	ENSGT00940000161735	ENSGT00940000156904.a.a.n	ENSGT00560000077232.A.b.o.a	ENSGT00940000154370.d.b.c.a	ENSGT00390000005284.a.g	ENSGT00390000015391.d	ENSGT00940000165364.a.b.a	ENSGT00940000165134.a.b.e.a	ENSGT00940000160115.a.b.b #24	ENSGT00940000157292.fc.a.a #21	ENSGT00940000159960.c.e #20	ENSGT00520000055635.c.b.a.b #22	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b.b	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b.a	ENSGT00940000158852.d.b.b #27	ENSGT01100000263479.I.b.c ##13	ENSGT01030000234575.c.a.a.b.e	ENSGT01000000214413.b.a.b.a.b.a	ENSGT00390000013354.b.b.c	ENSGT00950000182805.a.a.b.a.c.b.c	ENSGT00940000153675.a.a.a.a.b.k.a	ENSGT00940000155088.b.a.a.e.a	ENSGT01100000263533.b.a.a.a.b.a.b	ENSGT00400000022326.b.a.b.b.a.b.a	ENSGT00940000164382.b.a.a	ENSGT00510000046803.b.a.b.d	ENSGT00940000153298.i.b.b.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00390000009448.t	ENSGT00940000160991.a.n.a	ENSGT00940000167703	ENSGT00940000160991.a.m	ENSGT00940000161735	ENSGT00940000156904.a.a.n	ENSGT00560000077232.A.b.o.a	ENSGT00940000154370.d.b.c.a	ENSGT00390000005284.a.g	ENSGT00390000015391.d	ENSGT00940000165364.a.b.a	ENSGT00940000165134.a.b.e.a	ENSGT00940000160115.a.b.b #24	ENSGT00940000157292.fc.a.a #21	ENSGT00940000159960.c.e #20	ENSGT00520000055635.c.b.a.b #22	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b.b	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b.a	ENSGT00940000158852.d.b.b #27	ENSGT01100000263479.I.b.c ##13	ENSGT01030000234575.c.a.a.b.e	ENSGT00530000065251.n.a.b	ENSGT01000000214413.b.a.b.a.b.a	ENSGT00390000013354.b.b.c	ENSGT00950000182805.a.a.b.a.c.b.c	ENSGT00940000153675.a.a.a.a.b.k.a	ENSGT00940000155088.b.a.a.e.a	ENSGT00940000164382.b.a.a	ENSGT00510000046803.b.a.b.d	ENSGT00940000153298.i.b.b.a.a	ENSGT00950000183106.a.b.a.d
Coho salmon	MODERN SPECIES	8	ENSOKIG00005048298	ENSOKIG00005048300	daxx (ENSOKIG00005048308)	zbtb22b (ENSOKIG00005048313)	ENSOKIG00005048330	znf384a (ENSOKIG00005048386)	FLOT1 (ENSOKIG00005048402)	ENSOKIG00005048444	ENSOKIG00005048462	ENSOKIG00005048467	pvrl2l (ENSOKIG00005048478)	ENSOKIG00005048730	POU2F2 (ENSOKIG00005049990) #24	erf (ENSOKIG00005049996) #21	ENSOKIG00005034281 #20	gsk3aa (ENSOKIG00005034313) #22	ENSOKIG00005034429	ENSOKIG00005034458	GRIK5 (ENSOKIG00005034498) #27	ENSOKIG00005034851 ##13	zgc:174904 (ENSOKIG00005034864)	ENSOKIG00005034906	gnb3b (ENSOKIG00005034927)	tpi1a (ENSOKIG00005034939)	ENSOKIG00005035021	eno2 (ENSOKIG00005035121)	chd4a (ENSOKIG00005035509)	ENSOKIG00005038703	ENSOKIG00005038713	vamp1a (ENSOKIG00005038728)	IFFO1 (ENSOKIG00005038746)
Chinook salmon	MODERN SPECIES	4	ENSOTSG00005038501	daxx (ENSOTSG00005038502)	zbtb22b (ENSOTSG00005038503)	ENSOTSG00005038504	kifc1 (ENSOTSG00005038506)	znf384a (ENSOTSG00005038507)	ENSOTSG00005038511	ENSOTSG00005038839	ENSOTSG00005038841	ENSOTSG00005038842	ENSOTSG00005038844	pvrl2l (ENSOTSG00005038846)	ENSOTSG00005039009	POU2F2 (ENSOTSG00005047096) #24	erf (ENSOTSG00005047098) #21	gsk3aa (ENSOTSG00005047101) #22	ENSOTSG00005047103	ENSOTSG00005047104	GRIK5 (ENSOTSG00005047107) #27	ENSOTSG00005047112 ##13	zgc:174904 (ENSOTSG00005047114)	ENSOTSG00005047115	gnb3b (ENSOTSG00005047116)	tpi1a (ENSOTSG00005047118)	eno2 (ENSOTSG00005047120)	cdc42l (ENSOTSG00005047149)	chd4a (ENSOTSG00005047156)	vamp1a (ENSOTSG00005047293)	IFFO1 (ENSOTSG00005047300)	GAPDH (ENSOTSG00005047309)	ing4 (ENSOTSG00005047348)
Rainbow trout	MODERN SPECIES	9	OnmyUAA-OSU (ENSOMYG00000007954)	ENSOMYG00000077564	tapbp.1 (ENSOMYG00000007865)	daxx (ENSOMYG00000007830)	zbtb22b (ENSOMYG00000007787)	kifc1 (ENSOMYG00000007756)	znf384a (ENSOMYG00000007681)	ENSOMYG00000007427	ENSOMYG00000007164	ENSOMYG00000007153	pvrl2l (ENSOMYG00000007111)	ENSOMYG00000005945	ENSOMYG00000006948 #24	erf (ENSOMYG00000005193) #21	ENSOMYG00000057559 #20	gsk3aa (ENSOMYG00000046825) #22	ENSOMYG00000046782	ENSOMYG00000046766	ENSOMYG00000046758 #27	ENSOMYG00000046737 ##13	zgc:174904 (ENSOMYG00000046729)	gnb3b (ENSOMYG00000061604)	ENSOMYG00000049501	tpi1a (ENSOMYG00000046714)	eno2 (ENSOMYG00000046693)	ENSOMYG00000064568	chd4a (ENSOMYG00000045794)	ENSOMYG00000039173	vamp1a (ENSOMYG00000045533)	ENSOMYG00000045527	ENSOMYG00000045507
Salmo	ANCESTRAL SPECIES	40	ENSGT00940000159200.e	ENSGT00390000009448.t	ENSGT00940000160991.a.n.a	ENSGT00940000173076	ENSGT00940000156904.a.a.n	ENSGT00560000077232.A.b.o.a	ENSGT00940000154370.d.b.c.a	ENSGT00940000154370.d.a.b	ENSGT00390000005284.a.g	ENSGT00390000015391.d	ENSGT00940000165364.a.b.a	ENSGT00940000165134.a.b.e.a	ENSGT00940000160115.a.b.b #24	ENSGT00940000157292.fc.a.a #21	ENSGT00940000159960.c.e #20	ENSGT00520000055635.c.b.a.b #22	ENSGT01100000263568.b.a.c.b.a.a.b.a.d.b	ENSGT00940000158852.d.b.b #27	ENSGT01100000263479.I.b.c ##13	ENSGT01030000234575.c.a.a.b.e	ENSGT01000000214413.b.a.b.a.b.a	ENSGT00390000013354.b.b.c	ENSGT00950000182805.a.a.b.a.c.b.c	ENSGT00940000153675.a.a.a.a.b.k.a	ENSGT00940000155088.b.a.a.e.a	ENSGT01100000263533.b.a.a.a.b.a.b	ENSGT01050000246012.b	ENSGT00400000022326.b.a.b.b.a.b.a	ENSGT00940000164382.b.a.a	ENSGT00510000046803.b.a.b.d	ENSGT00940000153298.i.b.b.a.a
River trout	MODERN SPECIES	27	daxx (ENSSTUG00000032708)	zbtb22b (ENSSTUG00000032701)	ENSSTUG00000032276	znf384a (ENSSTUG00000032242)	ENSSTUG00000032211	ENSSTUG00000032176	ENSSTUG00000032171	ENSSTUG00000032157	ENSSTUG00000032148	pvrl2l (ENSSTUG00000032115)	ENSSTUG00000024829	ENSSTUG00000024651 #24	ENSSTUG00000024638 #24	erf (ENSSTUG00000024624) #21	ENSSTUG00000024445 #20	gsk3aa (ENSSTUG00000024309) #22	ENSSTUG00000024191	GRIK5 (ENSSTUG00000023338) #27	ENSSTUG00000023296 ##13	zgc:174904 (ENSSTUG00000023258)	gnb3b (ENSSTUG00000023237)	tpi1a (ENSSTUG00000023175)	eno2 (ENSSTUG00000023051)	cdc42l (ENSSTUG00000023027)	chd4a (ENSSTUG00000020584)	ENSSTUG00000020529	ENSSTUG00000050927	ENSSTUG00000050926	vamp1a (ENSSTUG00000050925)	IFFO1 (ENSSTUG00000050920)	GAPDH (ENSSTUG00000050840)
Atlantic salmon	MODERN SPECIES	19	ENSSSAG00000077419	ENSSSAG00000077407	daxx (ENSSSAG00000077402)	zbtb22b (ENSSSAG00000077397)	ENSSSAG00000077337	znf384a (ENSSSAG00000110443)	TBB5 (ENSSSAG00000077200)	ENSSSAG00000077192	ENSSSAG00000077212	TCF19 (ENSSSAG00000077187)	pvrl2l (ENSSSAG00000095180)	ENSSSAG00000071358	ENSSSAG00000071136 #24	erf (ENSSSAG00000081836) #21	ENSSSAG00000071083 #20	gsk3aa (ENSSSAG00000003471) #22	ENSSSAG00000070636	ENSSSAG00000070559 #27	ENSSSAG00000070515 ##13	zgc:174904 (ENSSSAG00000070511)	gnb3b (ENSSSAG00000070506)	tpi1a (ENSSSAG00000070498)	eno2 (ENSSSAG00000070432)	ENSSSAG00000074128	chd4a (ENSSSAG00000068761)	vamp1a (ENSSSAG00000104713)	ENSSSAG00000119761	ENSSSAG00000068561	ENSSSAG00000067995	ENSSSAG00000067521	ing4 (ENSSSAG00000118702)
Huchen	MODERN SPECIES	379			ENSHHUG00000038212	daxx (ENSHHUG00000038202)	zbtb22b (ENSHHUG00000038177)	ENSHHUG00000038151	znf384a (ENSHHUG00000038137)	ENSHHUG00000038129	ENSHHUG00000038120	ENSHHUG00000038117	pvrl2l (ENSHHUG00000038104)	ENSHHUG00000037721	POU2F2 (ENSHHUG00000037636) #24	erf (ENSHHUG00000037631) #21	CIC (ENSHHUG00000037535) #20	gsk3aa (ENSHHUG00000037487) #22	ENSHHUG00000037439	GRIK5 (ENSHHUG00000037389) #27	ENSHHUG00000037371 ##13	zgc:174904 (ENSHHUG00000037363)	gnb3b (ENSHHUG00000037347)	tpi1a (ENSHHUG00000037321)	eno2 (ENSHHUG00000037213)	cdc42l (ENSHHUG00000037015)	chd4a (ENSHHUG00000035493)
Northern pike	MODERN SPECIES	9	ENSELUG00000019818	ENSELUG00000001299	ENSELUG00000020334	daxx (ENSELUG00000027362)	zbtb22b (ENSELUG00000020345)	ENSELUG00000020513	znf384a (ENSELUG00000020479)	ENSELUG00000020613	ENSELUG00000020682	ENSELUG00000020694	pvrl2l (ENSELUG00000020778)	ENSELUG00000020857	POU2F2 (ENSELUG00000000918) #24	erf (ENSELUG00000020923) #21	ENSELUG00000020931 #20	gsk3aa (ENSELUG00000020954) #22	ENSELUG00000020968	GRIK5 (ENSELUG00000021029) #27	ENSELUG00000021090 ##13	zgc:174904 (ENSELUG00000021109)	gnb3b (ENSELUG00000021120)	tpi1a (ENSELUG00000021130)	eno2 (ENSELUG00000021163)	cdc42l (ENSELUG00000021203)	chd4a (ENSELUG00000021276)	ENSELUG00000029497	ENSELUG00000026707	ENSELUG00000021459	ENSELUG00000034467	vamp1a (ENSELUG00000021474)	IFFO1 (ENSELUG00000021568)
Otomorpha	ANCESTRAL SPECIES	208	ENSGT01100000263531.G	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000164565	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.a.b	ENSGT00940000155088.b.a.a
Otophysi	ANCESTRAL SPECIES	207	ENSGT00940000157293	ENSGT01100000263531.G	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000155088.b.a.a
Cyprinoidei	ANCESTRAL SPECIES	35	ENSGT00940000157293	ENSGT01100000263531.G.q.b.b.a	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b.f	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b.c #24	ENSGT00940000157292.fc.a.d #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01030000234646.B.a.a.a.a.b	ENSGT00950000182977.B.b.a.c.a	ENSGT00940000155095.i.b.b.v.a	ENSGT00940000155557.jc.a	ENSGT00940000156395.f	ENSGT00390000015789	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f	ENSGT01090000260030.a.b.b.b.v	ENSGT01030000235009	ENSGT00940000164067.A
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	345												ENSGT00940000165134.a.a.a	ENSGT00940000160115.a.b.c.b #24	ENSGT00940000157292.fc.a.d.b #21	ENSGT00940000159960.c.b #20	ENSGT00520000055635.c.b.a.c #22	ENSGT00940000158852.g.b.d #27	ENSGT01100000263479.I.b.a.a.b ##13	ENSGT01030000234575.c.a.a.b.d	ENSGT01030000234646.B.a.a.a.a.b.b	ENSGT00950000182977.B.b.a.c.a	ENSGT00940000155095.i.b.b.v.a	ENSGT00940000155557.jc.a.a	ENSGT00940000156395.f.a	ENSGT00390000015789.k.b.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e.c	ENSGT01090000260030.a.b.b.b.v.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f.a	ENSGT01090000260030.a.b.b.b.v.a.b	ENSGT01030000235009.c
Cyprininae_a	ANCESTRAL SPECIES	43	ENSGT01100000263531.G.q.b.a.a.b	ENSGT01100000263531.G.q.a	ENSGT00390000009448.a	ENSGT00940000160991.a.b	ENSGT00940000161735.d	ENSGT00940000173076	ENSGT00940000156904.a.a.a	ENSGT00560000077232.A.a.f.b	ENSGT00390000005284.a	ENSGT00390000015391.b	ENSGT00940000165364.a.b.e	ENSGT00940000165134.a.a.a	ENSGT00940000160115.a.b.c.b #24	ENSGT00940000157292.fc.a.d.b #21	ENSGT00940000159960.c.b #20	ENSGT00520000055635.c.b.a.c #22	ENSGT00940000158852.g.b.d #27	ENSGT01100000263479.I.b.a.a.b ##13	ENSGT01030000234575.c.a.a.b.d	ENSGT01030000234646.B.a.a.a.a.b.b	ENSGT00950000182977.B.b.a.c.a	ENSGT00940000155095.i.b.b.v.a	ENSGT00940000155557.jc.a.a	ENSGT00940000156395.f.a	ENSGT00390000015789.k.b.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x.f.b	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x.e	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e.c	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f.a	ENSGT01090000260030.a.b.b.b.v.a.b	ENSGT01030000235009.c
Golden-line barbel	MODERN SPECIES	381	psmb8a (ENSSGRG00000044577)	mhc1uba (ENSSGRG00000044587)	ENSSGRG00000044591	daxx (ENSSGRG00000044619)	zbtb22b (ENSSGRG00000044621)	ENSSGRG00000044622	znf384a (ENSSGRG00000044626)	FLOT1 (ENSSGRG00000044631)	ENSSGRG00000044689	ENSSGRG00000044690	ENSSGRG00000044692	atp1a3a (ENSSGRG00000044964)	ENSSGRG00000051742 #24	erf (ENSSGRG00000051743) #21	ENSSGRG00000051744 #20	gsk3aa (ENSSGRG00000051747) #22	GRIK5 (ENSSGRG00000051854) #27	ENSSGRG00000051856 ##13	zgc:174904 (ENSSGRG00000051859)	pdk2b (ENSSGRG00000051871)	si:ch211-264f5.2 (ENSSGRG00000052093)	wipf2b (ENSSGRG00000052095)	JUP (ENSSGRG00000052097)	eif1 (ENSSGRG00000052136)	ENSSGRG00000052138	ENSSGRG00000052139	ENSSGRG00000052141	krtt1c19e (ENSSGRG00000052144)	si:dkeyp-113d7.1 (ENSSGRG00000052146)	stx1b (ENSSGRG00000052149)	ENSSGRG00000052153
Common carp reference	MODERN SPECIES	12	ENSCCRG00000064806	ENSCCRG00000037550	ENSCCRG00000040017	daxx (ENSCCRG00000015214)	zbtb22b (ENSCCRG00000053572)	kifc1 (ENSCCRG00000077748)	znf384a (ENSCCRG00000056107)	ENSCCRG00000067624	ENSCCRG00000067516	ENSCCRG00000063415	ENSCCRG00000053918	atp1a3a (ENSCCRG00000074144)	ENSCCRG00000036897 #24	erf (ENSCCRG00000057968) #21	ENSCCRG00000008888 #20	gsk3aa (ENSCCRG00000059996) #22	ENSCCRG00000052380 #27	ENSCCRG00000071886 ##13	ENSCCRG00000077229	ENSCCRG00000077544	ENSCCRG00000079042	ENSCCRG00000070130	zgc:174904 (ENSCCRG00000045610)	pdk2b (ENSCCRG00000008704)	si:ch211-264f5.2 (ENSCCRG00000071849)	ENSCCRG00000067109	si:ch211-264f5.2 (ENSCCRG00000023479)	ENSCCRG00000045585	ENSCCRG00000058556	ENSCCRG00000080366	wipf2b (ENSCCRG00000010499)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	10	kcnk9 (ENSCARG00000046352)	rragcb (ENSCARG00000046364)	fhl3b (ENSCARG00000046380)	daxx (ENSCARG00000046390)	zbtb22b (ENSCARG00000046403)	ENSCARG00000046416	znf384a (ENSCARG00000046482)	FLOT1 (ENSCARG00000046530)	ENSCARG00000046767	ENSCARG00000046781	ENSCARG00000046786	atp1a3a (ENSCARG00000046820)	ENSCARG00000047230 #24	erf (ENSCARG00000047263) #21	ENSCARG00000047278 #20	gsk3aa (ENSCARG00000047308) #22	GRIK5 (ENSCARG00000047410) #27	ENSCARG00000047819	ENSCARG00000047846 ##13	zgc:174904 (ENSCARG00000047870)	pdk2b (ENSCARG00000047913)	si:ch211-264f5.2 (ENSCARG00000047939)	FUT9 (ENSCARG00000047956)	wipf2b (ENSCARG00000047985)	ENSCARG00000048014	JUP (ENSCARG00000048083)	eif1 (ENSCARG00000048464)	ENSCARG00000048491	ENSCARG00000048563	krtt1c19e (ENSCARG00000048590)	ENSCARG00000048616
Goldfish	MODERN SPECIES	10	eif1 (ENSCARG00000048464)	ENSCARG00000048491	ENSCARG00000048563	krtt1c19e (ENSCARG00000048590)	ENSCARG00000048616	si:dkeyp-113d7.1 (ENSCARG00000048673)	ENSCARG00000048680	stx1b (ENSCARG00000048723)	ENSCARG00000048906	gnb3b (ENSCARG00000048947)	tpi1a (ENSCARG00000048976)	eno2 (ENSCARG00000049017)	ENSCARG00000049241 #24	erf (ENSCARG00000049270) #21	ENSCARG00000049313 #20	gsk3aa (ENSCARG00000049337) #22	ENSCARG00000049365	ENSCARG00000002045	ENSCARG00000002076	scrt1a (ENSCARG00000002146)	ENSCARG00000002198	ENSCARG00000002296	ENSCARG00000002308	RNF5 (ENSCARG00000002320)	slc44a4 (ENSCARG00000002408)	ENSCARG00000002570	ehmt2 (ENSCARG00000002647)	zdhhc3b (ENSCARG00000003667)	zdhhc3b (ENSCARG00000003674)	ENSCARG00000003680	OSBPL10 (ENSCARG00000003706)
Cyprininae	ANCESTRAL SPECIES	55	ENSGT00940000161735.c	ENSGT00940000156904.a.a.b	ENSGT00560000077232.A.a.f.a	ENSGT00940000173076	ENSGT00940000156904.a.a.a	ENSGT00560000077232.A.a.f.b	ENSGT00390000005284.a	ENSGT00390000015391.b	ENSGT00940000165364.a.b.e	ENSGT00390000015391.a	ENSGT00940000165364.a.b.f	ENSGT00940000165134.a.a.b	ENSGT00940000160115.a.b.c.a #24	ENSGT00940000157292.fc.a.d.a #21	ENSGT00940000159960.c.a #20	ENSGT00520000055635.c.b.a.d #22	ENSGT00940000158852.g.b.c #27	ENSGT01100000263479.I.b.b ##13	ENSGT01030000234575.c.a.a.b.c	ENSGT01030000234646.B.a.a.a.a.b.a	ENSGT00940000155557.jc.a.b	ENSGT00940000156395.f.b	ENSGT00390000015789.k.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x.f.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e.d	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f.b	ENSGT01090000260030.a.b.b.b.v.a.a	ENSGT01030000235009.d	ENSGT00940000164067.A.g	ENSGT01030000234627.a.a.d.b.a	ENSGT00940000164729.a.a.g
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	38																gsk3aa (ENSCARG00000044403) #22	GRIK5 (ENSCARG00000044078) #27	ENSCARG00000044021 ##13	zgc:174904 (ENSCARG00000044004)	pdk2b (ENSCARG00000042601)	wipf2b (ENSCARG00000042519)	JUP (ENSCARG00000042204)	EIF1 (ENSCARG00000042120)	ENSCARG00000042005	krtt1c19e (ENSCARG00000041982)	ENSCARG00000041962	si:dkeyp-113d7.1 (ENSCARG00000041955)	ENSCARG00000041939	prf1.3 (ENSCARG00000041917)	stx1b (ENSCARG00000041483)	ENSCARG00000041429
Goldfish	MODERN SPECIES	38	ENSCARG00000027669	ENSCARG00000027676	meaf6 (ENSCARG00000027707)	stpg1 (ENSCARG00000027732)	map7d1b (ENSCARG00000027760)	ENSCARG00000027768	eva1bb (ENSCARG00000027776)	LSM10 (ENSCARG00000027782)	oscp1a (ENSCARG00000027787)	ENSCARG00000027799	zc3h12ab (ENSCARG00000027812)	ENSCARG00000027832	smim13 (ENSCARG00000027974)	nedd9 (ENSCARG00000027982)	ENSCARG00000028022 #20	gsk3aa (ENSCARG00000028048) #22	GRIK5 (ENSCARG00000028160) #27	ENSCARG00000029734 ##13	zgc:174904 (ENSCARG00000029741)	pdk2b (ENSCARG00000029746)	wipf2b (ENSCARG00000029755)	JUP (ENSCARG00000029775)	ENSCARG00000029836	CDK12 (ENSCARG00000029853)	ppp1r1b (ENSCARG00000029877)	stard3 (ENSCARG00000029933)	zgc:91968 (ENSCARG00000030551)	chd4a (ENSCARG00000030876)	eif1 (ENSCARG00000040295)	ENSCARG00000040379	krtt1c19e (ENSCARG00000040524)
Cyprininae_a	ANCESTRAL SPECIES	80	ENSGT00940000165375.z.a	ENSGT00940000165504.x	ENSGT00940000157293.gb.a	ENSGT01100000263531.G.q.b.b.a.b.b	ENSGT00390000009448.b	ENSGT00940000160991.a.a	ENSGT00940000161735.c	ENSGT00940000156904.a.a.b	ENSGT00560000077232.A.a.f.a	ENSGT00390000015391.a	ENSGT00940000165364.a.b.f	ENSGT00940000165134.a.a.b	ENSGT00940000160115.a.b.c.a #24	ENSGT00940000157292.fc.a.d.a #21	ENSGT00940000159960.c.a #20	ENSGT00520000055635.c.b.a.d #22	ENSGT00940000158852.g.b.c #27	ENSGT01100000263479.I.b.b ##13	ENSGT01030000234575.c.a.a.b.c	ENSGT01030000234646.B.a.a.a.a.b.a	ENSGT00940000155557.jc.a.b	ENSGT00940000156395.f.b	ENSGT00390000015789.k.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.b.x.f.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.e.d	ENSGT01090000260030.a.b.b.b.v.a.a	ENSGT00950000182969.B.c.a.a.b.a.a.a.a.a.a.a.f.b	ENSGT01090000260030.a.b.b.b.v.b	ENSGT01030000235009.d	ENSGT00940000164067.A.g	ENSGT01030000234627.a.a.d.b.a
Common carp reference	MODERN SPECIES	31	psmb13a (ENSCCRG00000007024)	psmb8a (ENSCCRG00000081832)	ENSCCRG00000074580	ENSCCRG00000057768	daxx (ENSCCRG00000006291)	zbtb22b (ENSCCRG00000077449)	kifc1 (ENSCCRG00000078565)	znf384a (ENSCCRG00000063145)	ENSCCRG00000069789	ENSCCRG00000062427	pvrl2l (ENSCCRG00000072848)	atp1a3a (ENSCCRG00000069604)	ENSCCRG00000059258 #24	erf (ENSCCRG00000008868) #21	ENSCCRG00000056794 #20	gsk3aa (ENSCCRG00000008932) #22	ENSCCRG00000008813 #27	ENSCCRG00000008683 ##13	zgc:174904 (ENSCCRG00000008690)	pdk2b (ENSCCRG00000045593)	wipf2b (ENSCCRG00000070194)	ENSCCRG00000010503	eif1 (ENSCCRG00000058842)	ENSCCRG00000053080	krtt1c19e (ENSCCRG00000067751)	si:dkeyp-113d7.1 (ENSCCRG00000080920)	ENSCCRG00000057967	prf1.3 (ENSCCRG00000005779)	stx1b (ENSCCRG00000004717)	ENSCCRG00000077692	gnb3b (ENSCCRG00000005771)
Golden-line barbel	MODERN SPECIES	497	ENSSGRG00000007203	ENSSGRG00000007205	ENSSGRG00000007211	daxx (ENSSGRG00000007611)	zbtb22b (ENSSGRG00000007614)	ENSSGRG00000007618	znf384a (ENSSGRG00000007622)	ENSSGRG00000007625	ENSSGRG00000007711	ENSSGRG00000007715	pvrl2l (ENSSGRG00000007716)	atp1a3a (ENSSGRG00000007969)	POU2F2 (ENSSGRG00000020200) #24	erf (ENSSGRG00000020201) #21	ENSSGRG00000020202 #20	gsk3aa (ENSSGRG00000020203) #22	GRIK5 (ENSSGRG00000020212) #27	ENSSGRG00000020213 ##13
Zebrafish	MODERN SPECIES	10	znf384a (ENSDARG00000001015)	FLOT1 (ENSDARG00000001710)	ENSDARG00000089953	ENSDARG00000089503	ENSDARG00000071097	ENSDARG00000087674	ENSDARG00000076134	ENSDARG00000099070	ENSDARG00000086931	ENSDARG00000040036	pvrl2l (ENSDARG00000063390)	atp1a3a (ENSDARG00000018259)	POU2F2 (ENSDARG00000036816) #24	erf (ENSDARG00000063417) #21	ENSDARG00000071150 #20	gsk3aa (ENSDARG00000029501) #22	ENSDARG00000111980 #27	ENSDARG00000078151 #27	ENSDARG00000079372 ##13	zgc:174904 (ENSDARG00000059049)	pdk2b (ENSDARG00000059054)	si:ch211-264f5.2 (ENSDARG00000078547)	ft1 (ENSDARG00000059056)	ft2 (ENSDARG00000109567)	wipf2b (ENSDARG00000006712)	JUP (ENSDARG00000059067)	eif1 (ENSDARG00000012688)	krt91 (ENSDARG00000036830)	krt17 (ENSDARG00000094041)	cyt1 (ENSDARG00000092947)	cyt1l (ENSDARG00000036832)
Clupeiformes	ANCESTRAL SPECIES	15	ENSGT00940000156272	ENSGT00940000158932	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000164565	ENSGT00940000156904.a.a	ENSGT00560000077232.A.b	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c.d #20	ENSGT00520000055635.c.b.a #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.a.b	ENSGT00940000155088.b.a.a
Atlantic herring	MODERN SPECIES	10	ENSCHAG00000024841	ENSCHAG00000024844	ENSCHAG00000024857	psmb9a (ENSCHAG00000024898)	ENSCHAG00000024914	ENSCHAG00000025072	ENSCHAG00000025074	ENSCHAG00000025080	pvrl2l (ENSCHAG00000025087)	ENSCHAG00000025176	ENSCHAG00000026180	ENSCHAG00000026185	POU2F2 (ENSCHAG00000026187) #24	erf (ENSCHAG00000026189) #21	CIC (ENSCHAG00000026192) #20	gsk3aa (ENSCHAG00000026206) #22	ENSCHAG00000026247	GRIK5 (ENSCHAG00000026252) #27	ENSCHAG00000026339 ##13	zgc:174904 (ENSCHAG00000026344)	gnb3b (ENSCHAG00000026346)	tpi1a (ENSCHAG00000026350)	eno2 (ENSCHAG00000026360)	cdc42l (ENSCHAG00000002415)	chd4a (ENSCHAG00000002793)	naxe (ENSCHAG00000007145)	sf3b4 (ENSCHAG00000007167)	mrpl24 (ENSCHAG00000007178)	prcc (ENSCHAG00000007189)	ENSCHAG00000007208	znf516 (ENSCHAG00000007326)
Osteoglossocephalai	ANCESTRAL SPECIES	4	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00940000157292.gc #21	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852 #27	ENSGT01100000263479.D #13	ENSGT01100000263479.H ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000163212.B ##30
Osteoglossiformes	ANCESTRAL SPECIES		ENSGT00390000011918	ENSGT00530000067342	ENSGT00390000015391	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a.q	ENSGT00940000165134.c	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.a #27	ENSGT01100000263956	ENSGT01100000263479.H ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000163212.B ##30
P. kingsleyae	MODERN SPECIES	96	ENSPKIG00000016252	ENSPKIG00000016267	vars1 (ENSPKIG00000016304)	abhd16a (ENSPKIG00000016395)	g6fl (ENSPKIG00000016434)	ENSPKIG00000016464	ENSPKIG00000016528	rabac1 (ENSPKIG00000016608) #29	ENSPKIG00000016626	dedd1 (ENSPKIG00000016662) #23	POU2F2 (ENSPKIG00000016737) #24	ERF (ENSPKIG00000016820) #21	CIC (ENSPKIG00000016854) #20	ENSPKIG00000016914	ZNF526 (ENSPKIG00000016928)	gsk3ab (ENSPKIG00000016961) #22	znf574 (ENSPKIG00000017004)	GRIK5 (ENSPKIG00000017058) #27	ENSPKIG00000017113
Asian bonytongue	MODERN SPECIES	9	ino80e (ENSSFOG00015014223)	ENSSFOG00015014243	ENSSFOG00015014249	vars1 (ENSSFOG00015014272)	abhd16a (ENSSFOG00015029848)	g6fl (ENSSFOG00015014391)	ENSSFOG00015014413	ENSSFOG00015014459	rabac1 (ENSSFOG00015014545) #29	dedd1 (ENSSFOG00015014578) #23	POU2F2 (ENSSFOG00015014626) #24	ERF (ENSSFOG00015032309) #21	CIC (ENSSFOG00015014684) #20	ENSSFOG00015030750	ENSSFOG00015025170	gsk3ab (ENSSFOG00015014824) #22	znf574 (ENSSFOG00015025340)	grik5 (ENSSFOG00015014897) #27	ENSSFOG00015027222	ENSSFOG00015028746	ENSSFOG00015026797 ##13	ENSSFOG00015028039 ##13	ENSSFOG00015014966 ##13	ENSSFOG00015022131	ENSSFOG00015026941 ##13	ENSSFOG00015022071 ##13	pafah1b3 (ENSSFOG00015022047) #19	tlr21 (ENSSFOG00015022011)	cnfn (ENSSFOG00015022004)	cxcr3.2 (ENSSFOG00015031772)	ENSSFOG00015021987
Clupeocephala	ANCESTRAL SPECIES		ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00940000157292.gc #21	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852 #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT00940000165798	ENSGT00940000159323.b
Otomorpha	ANCESTRAL SPECIES	14	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.b #24	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000157292.gc #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT01030000234778	ENSGT00940000163576	ENSGT00940000161202	ENSGT01100000263479.B ##13	ENSGT01100000263479.F ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i
Otophysi	DUPLICATION
Otophysi	DUPLICATION
Otophysi	ANCESTRAL SPECIES	1	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT01030000234778	ENSGT01100000263479.F ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000181905	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i	ENSGT00390000001745.a	ENSGT00510000054197	ENSGT00940000156036
Characiphysae	ANCESTRAL SPECIES		ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT01100000263479.F ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000181905	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i	ENSGT00390000001745.a	ENSGT00510000054197	ENSGT00940000156036	ENSGT00940000159164
Channel catfish	MODERN SPECIES		INO80E (ENSIPUG00000005183)	ENSIPUG00000005206	vars (ENSIPUG00000005218)	abhd16a (ENSIPUG00000005450)	g6fl (ENSIPUG00000005534)	ENSIPUG00000005573	atp1a3b (ENSIPUG00000005589)	rabac1 (ENSIPUG00000005728) #29	dedd2 (ENSIPUG00000005741) #23	ENSIPUG00000005772	pou2f2a (ENSIPUG00000005790) #24	erf (ENSIPUG00000005898) #21	cic (ENSIPUG00000005917) #20	znf574 (ENSIPUG00000005944)	ENSIPUG00000005951	Gsk3b (ENSIPUG00000005965) #22	znf574 (ENSIPUG00000006000)	grik5 (ENSIPUG00000006049) #27	ENSIPUG00000006106 ##13	ENSIPUG00000006131 ##13	ENSIPUG00000006209 ##13	ENSIPUG00000006224 ##13	pafah1b3 (ENSIPUG00000006258) #19	ENSIPUG00000006280	tlr21 (ENSIPUG00000006307)	cnfn (ENSIPUG00000006326)	cxcr3.2 (ENSIPUG00000006343)	cxcr3.3 (ENSIPUG00000006350)	cxcr3 (ENSIPUG00000006358)	cd4-1 (ENSIPUG00000006367)	cd4-2.2 (ENSIPUG00000006445)
Characiphysae_b	ANCESTRAL SPECIES	15	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000157292.gc #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT00940000167162	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i	ENSGT00390000001745.a	ENSGT00510000054197	ENSGT00940000156036	ENSGT00940000159164	ENSGT01000000214413.b.a.b.a.a	ENSGT00390000017343
Characoidei	ANCESTRAL SPECIES	28	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b.a.a #22	ENSGT00940000158852.g.a #27	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i	ENSGT00390000001745.a	ENSGT00510000054197.a	ENSGT00510000054197.b	ENSGT00940000168039	ENSGT00940000156036	ENSGT00940000159164	ENSGT01000000214413.b.a.b.a.a
Mexicana tetra	MODERN SPECIES	2	cxcr3.1 (ENSAMXG00000029906)	cxcr3.3 (ENSAMXG00000018866)	cxcr3.2 (ENSAMXG00000035350)	cnfn (ENSAMXG00000034341)	tlr21 (ENSAMXG00000025136)	pafah1b3 (ENSAMXG00000037557) #19	ENSAMXG00000018704 ##13	ENSAMXG00000033173 ##13	ENSAMXG00000043617 ##13	ENSAMXG00000030086 ##13	ENSAMXG00000018666 ##13	grik5 (ENSAMXG00000018469) #27	znf574 (ENSAMXG00000038917)	ENSAMXG00000018358 #20	ENSAMXG00000018302	gsk3ab (ENSAMXG00000037552) #22	ERF (ENSAMXG00000033215) #21	ENSAMXG00000029528 #24	ENSAMXG00000030978	dedd1 (ENSAMXG00000039651) #23	rabac1 (ENSAMXG00000041839) #29	atp1a3b (ENSAMXG00000017919)	ENSAMXG00000017895	g6fl (ENSAMXG00000017888)	abhd16a (ENSAMXG00000037005)	vars1 (ENSAMXG00000017716)	dync1i1 (ENSAMXG00000017693)	ZFAT (ENSAMXG00000017667)	rbfa (ENSAMXG00000042499)	adnp2a (ENSAMXG00000017652)	pard6ga (ENSAMXG00000035026)
Red-bellied piranha	MODERN SPECIES	961																gsk3ab (ENSPNAG00000000580) #22	znf574 (ENSPNAG00000008035)	mfsd4ab (ENSPNAG00000000621)	lemd1 (ENSPNAG00000008077)	pm20d1.2 (ENSPNAG00000000657)	ENSPNAG00000000666	ENSPNAG00000008115	rbm12bb (ENSPNAG00000008126)	ENSPNAG00000000699
Electric eel	MODERN SPECIES	334	ino80e (ENSEEEG00000002279)	ENSEEEG00000002280	vars1 (ENSEEEG00000002296)	abhd16a (ENSEEEG00000003555)	g6fl (ENSEEEG00000003569)	ENSEEEG00000003579	atp1a3b (ENSEEEG00000003598)	rabac1 (ENSEEEG00000003779) #29	dedd1 (ENSEEEG00000003780) #23	dedd1 (ENSEEEG00000003782) #23	ENSEEEG00000003784 #24	ENSEEEG00000003786 #21	ENSEEEG00000003788 #20	ZNF526 (ENSEEEG00000003789)	ENSEEEG00000003790	gsk3ab (ENSEEEG00000003793) #22	znf574 (ENSEEEG00000003806)	grik5 (ENSEEEG00000003809) #27	ceacam1 (ENSEEEG00000003822)	pafah1b3 (ENSEEEG00000003827) #19	tlr21 (ENSEEEG00000003829)	cnfn (ENSEEEG00000003831)	cxcr3.2 (ENSEEEG00000003832)
Cyprinoidei	ANCESTRAL SPECIES	13	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a #22	ENSGT00940000166708	ENSGT00940000158852.g.a #27	ENSGT01030000234778	ENSGT00940000167162	ENSGT01060000253583	ENSGT00950000183199.a.b #19	ENSGT00940000181905	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.j	ENSGT01050000244848.B.a.b.e.i	ENSGT00390000001745.a	ENSGT00510000054197.c	ENSGT00940000156036
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	7	ENSGT00390000005284.b.a	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342.a	ENSGT00940000157775.l	ENSGT00940000160908.d	ENSGT01030000234988.d	ENSGT00940000165364.a.a.e	ENSGT00940000165134.b.a	ENSGT00390000010549.i #29	ENSGT00390000008714.b.l #23	ENSGT00940000160115.a.a.a #24	ENSGT00940000157292.fc.b.b #21	ENSGT00940000159960.d.h #20	ENSGT00940000162624.b	ENSGT00520000055635.c.b.b.a.a.a #22	ENSGT00940000166708.g	ENSGT00940000158852.g.a.a #27	ENSGT01030000234778	ENSGT01100000263479.F.g ##13	ENSGT01100000263479.F.h ##13	ENSGT00940000167162.a	ENSGT00950000183199.a.b.g.a #19	ENSGT00940000163576.j.a	ENSGT00940000161202	ENSGT01050000244848.B.b.a	ENSGT01050000244848.B.a.b.e.j.a	ENSGT01050000244848.B.a.b.e.i.f	ENSGT00390000001745.a.c	ENSGT00510000054197.c.b	ENSGT00940000156036.kb
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	35	ENSCARG00000017649	ENSCARG00000017642	ino80e (ENSCARG00000017630)	ENSCARG00000017622	vars1 (ENSCARG00000013097)	abhd16a (ENSCARG00000012616)	g6fl (ENSCARG00000012588)	ENSCARG00000012575	atp1a3b (ENSCARG00000011651)	rabac1 (ENSCARG00000011602) #29	dedd1 (ENSCARG00000011587) #23	ENSCARG00000011539 #24	ENSCARG00000011518 #21	ENSCARG00000011510 #20	ZNF526 (ENSCARG00000011498)	gsk3ab (ENSCARG00000011445) #22	znf574 (ENSCARG00000011434)	grik5 (ENSCARG00000011313) #27	ENSCARG00000011280 ##13	ENSCARG00000011217 ##13	ENSCARG00000011194	ceacam1 (ENSCARG00000011183)	PAFAH1B3 (ENSCARG00000011180) #19	cnfn (ENSCARG00000011173)	cxcr3.2 (ENSCARG00000011164)	ENSCARG00000011160	cxcr3.3 (ENSCARG00000011159)	cxcr3.1 (ENSCARG00000011155)	cd4-1 (ENSCARG00000011130)	ENSCARG00000011118	usp5 (ENSCARG00000011002)
Goldfish	MODERN SPECIES	1502															ENSCARG00000034389	gsk3ab (ENSCARG00000034296) #22	znf574 (ENSCARG00000034285)
Cyprininae_a	ANCESTRAL SPECIES	36	ENSGT00390000005284.b.b	ENSGT00940000163587.b.b	ENSGT00390000011918	ENSGT00530000067342.a	ENSGT00940000157775.l	ENSGT00940000160908.d	ENSGT01030000234988.d	ENSGT00940000165364.a.a.e	ENSGT00940000165134.b.a	ENSGT00390000010549.i #29	ENSGT00390000008714.b.l #23	ENSGT00940000160115.a.a.a #24	ENSGT00940000157292.fc.b.b #21	ENSGT00940000159960.d.h #20	ENSGT00940000162624.b	ENSGT00520000055635.c.b.b.a.a.a #22	ENSGT00940000166708.g	ENSGT00940000158852.g.a.a #27	ENSGT01030000234778.i	ENSGT01100000263479.F.h ##13	ENSGT00940000167162.a	ENSGT00950000183199.a.b.g.a #19	ENSGT00940000163576.j.a	ENSGT00940000161202	ENSGT01050000244848.B.b.a	ENSGT01050000244848.B.a.b.e.j.a	ENSGT01050000244848.B.a.b.e.i.f	ENSGT00390000001745.a.c	ENSGT00510000054197.c.b	ENSGT00940000156036.kb	ENSGT00940000159164.b
Common carp reference	MODERN SPECIES	2	mdc1 (ENSCCRG00000042952)	ENSCCRG00000068313	ino80e (ENSCCRG00000064053)	ENSCCRG00000007461	vars1 (ENSCCRG00000007482)	abhd16a (ENSCCRG00000007847)	g6fl (ENSCCRG00000005033)	ENSCCRG00000029630	atp1a3b (ENSCCRG00000065983)	rabac1 (ENSCCRG00000069933) #29	dedd1 (ENSCCRG00000058916) #23	ENSCCRG00000006260 #24	ENSCCRG00000008386 #21	ENSCCRG00000078378 #20	ENSCCRG00000055763	gsk3ab (ENSCCRG00000056487) #22	znf574 (ENSCCRG00000020429)	grik5 (ENSCCRG00000050777) #27	ENSCCRG00000053653	ENSCCRG00000063279	ENSCCRG00000056225 ##13	ENSCCRG00000066885	ENSCCRG00000081209	ENSCCRG00000022593 ##13	ENSCCRG00000038068	ENSCCRG00000081937	ENSCCRG00000031514 ##13	ceacam1 (ENSCCRG00000023335)	ENSCCRG00000059206 #19	tlr21 (ENSCCRG00000040032)	cnfn (ENSCCRG00000040035)
Golden-line barbel	MODERN SPECIES	39	ino80e (ENSSGRG00000007798)	ENSSGRG00000007795	vars1 (ENSSGRG00000005287)	abhd16a (ENSSGRG00000002845)	g6fl (ENSSGRG00000002765)	ENSSGRG00000002764	atp1a3b (ENSSGRG00000002073)	rabac1 (ENSSGRG00000002016) #29	dedd1 (ENSSGRG00000002014) #23	ENSSGRG00000002011 #24	ENSSGRG00000002006 #24	ENSSGRG00000002003 #21	ENSSGRG00000001998	ENSSGRG00000001991 #20	ENSSGRG00000001988	gsk3ab (ENSSGRG00000001965) #22	znf574 (ENSSGRG00000001962)	grik5 (ENSSGRG00000001930) #27	ENSSGRG00000001924	ENSSGRG00000001921 ##13	tp53bp2a (ENSSGRG00000001920)	KCNIP2 (ENSSGRG00000001919)	ENSSGRG00000001787	ENSSGRG00000001775	ches1 (ENSSGRG00000001774)	ENSSGRG00000001773	ENSSGRG00000001770	nrxn1b (ENSSGRG00000001316)	ENSSGRG00000001239
Cyprininae	ANCESTRAL SPECIES	124			ENSGT00530000067342.b	ENSGT00940000157775.k	ENSGT00940000160908.c	ENSGT01030000234988.c	ENSGT00940000165364.a.a.f	ENSGT00940000165134.b.b	ENSGT00390000010549.j #29	ENSGT00390000008714.b.k #23	ENSGT00940000160115.a.a.b #24	ENSGT00940000157292.fc.b.a #21	ENSGT00940000159960.d.g #20	ENSGT00940000162624.a	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a.b #22	ENSGT00940000166708.h	ENSGT00940000158852.g.a.b #27	ENSGT00940000167162.b	ENSGT00950000183199.a.b.h #19	ENSGT00940000163576.j.b	ENSGT01050000244848.B.b.b	ENSGT01050000244848.B.a.b.e.j.b	ENSGT01050000244848.B.a.b.e.i.e	ENSGT00390000001745.a.d	ENSGT00510000054197.d	ENSGT00940000156036.jb	ENSGT00940000159164.a	ENSGT01000000214413.b.a.b.a.a	ENSGT00390000017343.u.b	ENSGT00940000156605.v
Goldfish	MODERN SPECIES	7	ENSCARG00000040239	ino80e (ENSCARG00000040223)	ENSCARG00000040208	vars1 (ENSCARG00000037153)	abhd16a (ENSCARG00000036866)	ENSCARG00000036846	ENSCARG00000036748	atp1a3b (ENSCARG00000035017)	rabac1 (ENSCARG00000034908) #29	dedd1 (ENSCARG00000034893) #23	ENSCARG00000034832 #24	ENSCARG00000034817 #21	ENSCARG00000034765 #20	ENSCARG00000034745	ZNF526 (ENSCARG00000034737)	gsk3ab (ENSCARG00000034703) #22	znf574 (ENSCARG00000034690)	grik5 (ENSCARG00000034665) #27	ENSCARG00000034654	ceacam1 (ENSCARG00000034628)	PAFAH1B3 (ENSCARG00000034611) #19	tlr21 (ENSCARG00000034606)	tlr21 (ENSCARG00000034586)	cnfn (ENSCARG00000034583)	cxcr3.2 (ENSCARG00000034570)	cxcr3.3 (ENSCARG00000034562)	cxcr3.1 (ENSCARG00000034547)	cd4-1 (ENSCARG00000034477)	ENSCARG00000034429	usp5 (ENSCARG00000031370)	P3H3 (ENSCARG00000031285)
Cyprininae_a	ANCESTRAL SPECIES	6	ENSGT00390000005284.b.a	ENSGT00940000163587.b.a	ENSGT00530000067342.b	ENSGT00940000157775.k	ENSGT00940000160908.c	ENSGT01030000234988.c	ENSGT00940000165364.a.a.f	ENSGT00940000165134.b.b	ENSGT00390000010549.j #29	ENSGT00390000008714.b.k #23	ENSGT00940000160115.a.a.b #24	ENSGT00940000157292.fc.b.a #21	ENSGT00940000159960.d.g #20	ENSGT00940000162624.a	ENSGT00940000177554	ENSGT00520000055635.c.b.b.a.a.b #22	ENSGT00940000166708.h	ENSGT00940000158852.g.a.b #27	ENSGT01030000234778.j	ENSGT00940000163576.j.b	ENSGT01050000244848.B.b.b	ENSGT01050000244848.B.a.b.e.j.b	ENSGT01050000244848.B.a.b.e.i.e	ENSGT00390000001745.a.d	ENSGT00510000054197.d	ENSGT00940000156036.jb	ENSGT00940000159164.a	ENSGT01000000214413.b.a.b.a.a	ENSGT00390000017343.u.b	ENSGT00940000156605.v	ENSGT00950000183086.a.b.e
Common carp reference	MODERN SPECIES	47	mdc1 (ENSCCRG00000057575)	ENSCCRG00000007458	ENSCCRG00000028812	vars1 (ENSCCRG00000004667)	abhd16a (ENSCCRG00000004972)	g6fl (ENSCCRG00000008460)	ENSCCRG00000005039	atp1a3b (ENSCCRG00000069738)	rabac1 (ENSCCRG00000006293) #29	dedd1 (ENSCCRG00000006274) #23	ENSCCRG00000029642 #24	ENSCCRG00000076881 #21	ENSCCRG00000067264 #20	ENSCCRG00000006097	ENSCCRG00000006239	gsk3ab (ENSCCRG00000005989) #22	znf574 (ENSCCRG00000067426)	grik5 (ENSCCRG00000038082) #27	ENSCCRG00000038156	ENSCCRG00000038075 ##13	ceacam1 (ENSCCRG00000040021)	zgc:158701 (ENSCCRG00000074123)	ENSCCRG00000069264 #19	cxcr3.2 (ENSCCRG00000030459)	tlr21 (ENSCCRG00000006231)	cxcr3.3 (ENSCCRG00000078220)	cxcr3.1 (ENSCCRG00000062938)	cd4-1 (ENSCCRG00000040502)	ENSCCRG00000040484	usp5 (ENSCCRG00000013025)	P3H3 (ENSCCRG00000013538)
Golden-line barbel	MODERN SPECIES	428	ENSSGRG00000020128	ENSSGRG00000020131	vars1 (ENSSGRG00000020179)	abhd16a (ENSSGRG00000022874)	g6fl (ENSSGRG00000023735)	ENSSGRG00000023736	atp1a3b (ENSSGRG00000023982)	rabac1 (ENSSGRG00000034203) #29	dedd1 (ENSSGRG00000034204) #23	POU2F2 (ENSSGRG00000034206) #24	ENSSGRG00000034209 #21	ENSSGRG00000034210 #20	ZNF526 (ENSSGRG00000034214)	ENSSGRG00000034215	ENSSGRG00000034216	gsk3ab (ENSSGRG00000034227) #22	znf574 (ENSSGRG00000034709)	grik5 (ENSSGRG00000034711) #27	ENSSGRG00000035006	tlr21 (ENSSGRG00000035008)	cxcr3.2 (ENSSGRG00000035009)	cxcr3.3 (ENSSGRG00000035011)	cxcr3.1 (ENSSGRG00000035014)	cxcr3.1 (ENSSGRG00000035017)
Zebrafish	MODERN SPECIES	7	ENSDARG00000105460	ino80e (ENSDARG00000022939)	ENSDARG00000101892	vars1 (ENSDARG00000044575)	abhd16a (ENSDARG00000078929)	g6fl (ENSDARG00000100809)	ENSDARG00000062831	zgc:165409 (ENSDARG00000091385)	atp1a3b (ENSDARG00000104139)	rabac1 (ENSDARG00000004171) #29	dedd1 (ENSDARG00000002758) #23	ENSDARG00000019658 #24	ERF (ENSDARG00000062801) #21	ENSDARG00000055502 #20	ENSDARG00000077143	gsk3ab (ENSDARG00000015681) #22	znf574 (ENSDARG00000087074)	grik5 (ENSDARG00000101449) #27	zgc:198329 (ENSDARG00000076981) ##13	ENSDARG00000095772 ##13	ENSDARG00000105461	ENSDARG00000105324 ##13	ENSDARG00000093279 ##13	ENSDARG00000078177 ##13	ENSDARG00000095134 ##13	ENSDARG00000092520 ##13	ENSDARG00000095048 ##13	ceacam1 (ENSDARG00000041119)	zgc:158701 (ENSDARG00000091864)	PAFAH1B3 (ENSDARG00000105336) #19	pafah1b3 (ENSDARG00000058047) #19
Otophysi	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.a.b #22
Characiphysae	ANCESTRAL SPECIES	151	ENSGT00940000165504	ENSGT00940000157293	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.b.a.b #22	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.b	ENSGT00940000155088.b.a.a.c
Characiphysae_b	ANCESTRAL SPECIES	61	ENSGT00940000165504	ENSGT00940000157293	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.b.a.b #22	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000155088.b.a.a.c	ENSGT00730000111747.b	ENSGT00940000154172.b	ENSGT00940000171931	ENSGT00940000168219	ENSGT00940000166691	ENSGT00530000063948.a	ENSGT00940000154489.B.a	ENSGT00950000183065.B.f
Characoidei	ANCESTRAL SPECIES	82	ENSGT00940000165504	ENSGT00940000157293	ENSGT00940000159200	ENSGT00390000009448	ENSGT00940000160991.a	ENSGT00940000161735	ENSGT00940000156904.a.a	ENSGT00560000077232.A.a.f	ENSGT00390000005284.a	ENSGT00390000015391	ENSGT00940000165364.a.b	ENSGT00940000165134.a.a	ENSGT00940000160115.a.b #24	ENSGT00940000157292.fc.a #21	ENSGT00940000159960.c #20	ENSGT00520000055635.c.b.b.a.b #22	ENSGT00940000166708	ENSGT00940000158852.g.b #27	ENSGT01100000263479.I.b ##13	ENSGT01030000234575.c.a.a.b	ENSGT01000000214413.b.a.b.a.b	ENSGT00390000013354.b.b	ENSGT00950000182805.a.a.b.a.c.b	ENSGT00940000153675.a.a.a.a.b	ENSGT00940000155088.b.a.a.c	ENSGT00730000111747.b	ENSGT00940000154172.b	ENSGT00940000171931	ENSGT00940000166691	ENSGT00530000063948.a	ENSGT00940000154489.B.a
Red-bellied piranha	MODERN SPECIES	141	psmb8a (ENSPNAG00000010671)	ENSPNAG00000010653	daxx (ENSPNAG00000010609)	zbtb22b (ENSPNAG00000010602)	kifc1 (ENSPNAG00000010590)	znf384a (ENSPNAG00000010552)	FLOT1 (ENSPNAG00000010516)	ENSPNAG00000010440	ENSPNAG00000010402	pvrl2l (ENSPNAG00000010374)	ENSPNAG00000010342	atp1a3a (ENSPNAG00000010322)	POU2F2 (ENSPNAG00000010198) #24	erf (ENSPNAG00000010147) #21	ENSPNAG00000010103 #20	GSK3A (ENSPNAG00000010051) #22	ENSPNAG00000010010	GRIK5 (ENSPNAG00000009981) #27	ENSPNAG00000009848 ##13	ENSPNAG00000009833	zgc:174904 (ENSPNAG00000009821)	gnb3b (ENSPNAG00000001335)	tpi1a (ENSPNAG00000009778)	eno2 (ENSPNAG00000009740)	ENSPNAG00000009682	chd4a (ENSPNAG00000009629)	ENSPNAG00000009488	ENSPNAG00000009419	ENSPNAG00000009373	s100s (ENSPNAG00000009356)	pygo2 (ENSPNAG00000009346)
Mexicana tetra	MODERN SPECIES	15	psmb8a (ENSAMXG00000014118)	ENSAMXG00000014158	daxx (ENSAMXG00000014180)	ENSAMXG00000033848	zbtb22b (ENSAMXG00000034704)	ENSAMXG00000014212	znf384a (ENSAMXG00000035967)	FLOT1 (ENSAMXG00000014240)	ENSAMXG00000029739	ENSAMXG00000032097	pvrl2l (ENSAMXG00000040192)	atp1a3a (ENSAMXG00000014290)	ENSAMXG00000014322 #24	erf (ENSAMXG00000014343) #21	ENSAMXG00000036025 #20	GSK3A (ENSAMXG00000014384) #22	ENSAMXG00000043063	GRIK5 (ENSAMXG00000014408) #27	ENSAMXG00000009395	cacng7a (ENSAMXG00000029894)	cacng8a (ENSAMXG00000043635)	cacng6a (ENSAMXG00000030494)	ENSAMXG00000029103	slc2a3a (ENSAMXG00000009319)	ENSAMXG00000036542	ENSAMXG00000039788	si:ch211-81a5.8 (ENSAMXG00000010045)	clk2a (ENSAMXG00000010041)	setdb1a (ENSAMXG00000010030)	lrrc71 (ENSAMXG00000031291)	ash1l (ENSAMXG00000009994)
Otophysi	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.b #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.b #22
Electric eel	MODERN SPECIES	1461																ENSEEEG00000007152 #22	ENSEEEG00000007153
Clupeiformes	ANCESTRAL SPECIES	342		ENSGT00940000157775	ENSGT00940000160908	ENSGT01030000234988	ENSGT00940000165364.a.a	ENSGT00940000165134.b	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22
Atlantic herring	MODERN SPECIES	2	ENSCHAG00000013526	ENSCHAG00000013509	ENSCHAG00000013487	ENSCHAG00000013321	ENSCHAG00000013302	ENSCHAG00000013273	ENSCHAG00000013232	ENSCHAG00000013207	ENSCHAG00000013193	ENSCHAG00000013183	ENSCHAG00000013175	ENSCHAG00000013011 #21	ENSCHAG00000012985	ENSCHAG00000012970 #20	ENSCHAG00000012960	gsk3ab (ENSCHAG00000012443) #22	znf574 (ENSCHAG00000012381)	ENSCHAG00000012343	dedd1 (ENSCHAG00000012313) #23	rabac1 (ENSCHAG00000012279) #29	ENSCHAG00000011054	ENSCHAG00000010910	ENSCHAG00000010900	ENSCHAG00000010810	si:ch211-269k10.5 (ENSCHAG00000010778)	ENSCHAG00000010768	ENSCHAG00000010758	ENSCHAG00000010746	ENSCHAG00000002991	rbm24b (ENSCHAG00000002344)	ENSCHAG00000014537
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	12	znf384a (ENSDCDG00000014899)	FLOT1 (ENSDCDG00000014903)	ENSDCDG00000014909	ENSDCDG00000014911	daxx (ENSDCDG00000014914)	kifc1 (ENSDCDG00000014915)	FLOT1 (ENSDCDG00000014924)	ENSDCDG00000014968	ENSDCDG00000014975	ENSDCDG00000014980	pvrl2l (ENSDCDG00000014985)	atp1a3a (ENSDCDG00000015285)	POU2F2 (ENSDCDG00000023322) #24	erf (ENSDCDG00000023325) #21	ENSDCDG00000023335 #20	GSK3A (ENSDCDG00000023362) #22	GRIK5 (ENSDCDG00000023449) #27	ENSDCDG00000023883 ##13	zgc:174904 (ENSDCDG00000023884)	gnb3b (ENSDCDG00000023885)	tpi1a (ENSDCDG00000023887)	eno2 (ENSDCDG00000023903)	ENSDCDG00000024043	chd4a (ENSDCDG00000024056)	ENSDCDG00000024626	ndufv1 (ENSDCDG00000024630)	ENSDCDG00000025129	ENSDCDG00000025134	ENSDCDG00000025149	necap1 (ENSDCDG00000025150)	epn1b (ENSDCDG00000025153)
Denticle herring	MODERN SPECIES	15	ENSDCDG00000001822	ENSDCDG00000001827	vars1 (ENSDCDG00000001963)	abhd16a (ENSDCDG00000002864)	g6fl (ENSDCDG00000003210)	ENSDCDG00000003238	ENSDCDG00000003443	rabac1 (ENSDCDG00000004070) #29	dedd1 (ENSDCDG00000004072) #23	ENSDCDG00000004077	POU2F2 (ENSDCDG00000004084) #24	ENSDCDG00000004099 #21	ENSDCDG00000004103 #20	ZNF526 (ENSDCDG00000004108)	ENSDCDG00000004112	GSK3A (ENSDCDG00000004115) #22	znf574 (ENSDCDG00000004120)	grik5 (ENSDCDG00000004184) #27	ENSDCDG00000004820 ##13	ENSDCDG00000004829 ##13	si:ch211-251f6.6 (ENSDCDG00000004837)	pafah1b3 (ENSDCDG00000004851) #19	tlr21 (ENSDCDG00000004860)	cnfn (ENSDCDG00000004863)	cxcr3.2 (ENSDCDG00000004865)	cxcr3.3 (ENSDCDG00000004870)	cxcr3.1 (ENSDCDG00000004872)	trim35-28 (ENSDCDG00000004877)	ENSDCDG00000004879	KCNN4 (ENSDCDG00000004889)	ENSDCDG00000004898
Euteleosteomorpha	ANCESTRAL SPECIES	4	ENSGT00940000165134.a.b	ENSGT00940000177056	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000157292.gc #21	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852 #27	ENSGT01030000234778	ENSGT00940000154363.A	ENSGT00730000111056.g #16	ENSGT00980000198994	ENSGT00940000153981.B #18	ENSGT00390000010698	ENSGT01050000244883.B.c.a	ENSGT01050000244883.B.c.b.b.a.a	ENSGT00950000183007.b.e.a	ENSGT01050000244883.B.c.b.a	ENSGT01050000244883.C.g.b	ENSGT01050000244883.C.g.a	ENSGT00940000156631.A
Acanthomorphata	ANCESTRAL SPECIES	9	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT00940000177810	ENSGT01000000216948	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT01100000263491.a.b.a.a.a.a.b	ENSGT00940000157292.gc #21	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000163212.B ##30	ENSGT00940000161180 #31
Cod	MODERN SPECIES	2	ENSGMOG00000015052	ENSGMOG00000015031	ino80e (ENSGMOG00000015016)	ENSGMOG00000014976	vars1 (ENSGMOG00000014908)	abhd16a (ENSGMOG00000014851)	ENSGMOG00000014831	ENSGMOG00000014788	rabac1 (ENSGMOG00000014746) #29	dedd1 (ENSGMOG00000014734) #23	ENSGMOG00000032602	ENSGMOG00000025253 #21	ENSGMOG00000027163 #20	ENSGMOG00000023483	ENSGMOG00000035157	gsk3ab (ENSGMOG00000005115) #22	znf574 (ENSGMOG00000005098)	grik5 (ENSGMOG00000005066) #27	ENSGMOG00000023529	ENSGMOG00000026124	ENSGMOG00000022804 ##13	ENSGMOG00000023465 ##13	pafah1b3 (ENSGMOG00000016325) #19	ENSGMOG00000030501	ENSGMOG00000028925	cxcr3.2 (ENSGMOG00000034379)	cxcr3.3 (ENSGMOG00000024653)	ENSGMOG00000016951	ENSGMOG00000016957	ENSGMOG00000016971 #17	ENSGMOG00000017060
Euacanthomorphacea	ANCESTRAL SPECIES		ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e
Pinecone sodierfish	MODERN SPECIES	7	ENSMMDG00005015497	ino80e (ENSMMDG00005015500)	ENSMMDG00005015503	vars1 (ENSMMDG00005015555)	abhd16a (ENSMMDG00005017647)	ENSMMDG00005018168	ENSMMDG00005018170	ENSMMDG00005018192	rabac1 (ENSMMDG00005019285) #29	dedd1 (ENSMMDG00005019287) #23	POU2F2 (ENSMMDG00005019292) #24	ENSMMDG00005019297 #21	ENSMMDG00005019305 #20	ENSMMDG00005019653	ENSMMDG00005019654	gsk3ab (ENSMMDG00005019661) #22	znf574 (ENSMMDG00005019871)	GRIK5 (ENSMMDG00005019875) #27	ENSMMDG00005019878	ENSMMDG00005019883 ##13	ENSMMDG00005019891 ##13	ENSMMDG00005019894 ##13	ENSMMDG00005019899 ##13	ENSMMDG00005019904 ##13	pafah1b3 (ENSMMDG00005019909) #19	tlr21 (ENSMMDG00005019915)	cnfn (ENSMMDG00005019917)	cxcr3.2 (ENSMMDG00005019918)	cxcr3.3 (ENSMMDG00005019922)	CXCR3 (ENSMMDG00005019933)	trim35-28 (ENSMMDG00005020013)
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e
Tiger tail seahorse	MODERN SPECIES	464	ENSHCOG00000012342	ENSHCOG00000012312	ino80e (ENSHCOG00000000706)	ENSHCOG00000012246	vars1 (ENSHCOG00000012198)	abhd16a (ENSHCOG00000012096)	ENSHCOG00000012072	ENSHCOG00000012011	ENSHCOG00000011997	rabac1 (ENSHCOG00000011980) #29	dedd1 (ENSHCOG00000011975) #23	POU2F2 (ENSHCOG00000011963) #24	ENSHCOG00000011951 #21	ENSHCOG00000011943 #20	ZNF526 (ENSHCOG00000011925)	gsk3ab (ENSHCOG00000011920) #22	znf574 (ENSHCOG00000011906)	grik5 (ENSHCOG00000011855) #27	ENSHCOG00000011822 ##13	ENSHCOG00000011803 ##13	ENSHCOG00000011667 ##13	pafah1b3 (ENSHCOG00000011626) #19	tlr21 (ENSHCOG00000011614)	cnfn (ENSHCOG00000011609)	cxcr3.2 (ENSHCOG00000011598)	cxcr3.3 (ENSHCOG00000011591)	ENSHCOG00000011586	MEGF8 (ENSHCOG00000011566) #17	ENSHCOG00000011497	ENSHCOG00000011485 #21	arhgef1b (ENSHCOG00000011475) #31
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.D #13	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Carangaria	ANCESTRAL SPECIES	1	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Pleuronectoidei	ANCESTRAL SPECIES	3	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000164807.G.a.a.b
Turbot	MODERN SPECIES		ENSSMAG00000009793	ENSSMAG00000009777	ino80e (ENSSMAG00000009739)	ENSSMAG00000009693	vars1 (ENSSMAG00000009596)	abhd16a (ENSSMAG00000009514)	ENSSMAG00000009488	ENSSMAG00000009455	ENSSMAG00000009326	rabac1 (ENSSMAG00000009295) #29	dedd1 (ENSSMAG00000009255) #23	ENSSMAG00000009157 #24	ENSSMAG00000009119 #21	ENSSMAG00000009033 #20	ENSSMAG00000009020	gsk3ab (ENSSMAG00000008999) #22	znf574 (ENSSMAG00000008952)	grik5 (ENSSMAG00000008882) #27	ENSSMAG00000008795 ##13	ENSSMAG00000008754 ##13	ENSSMAG00000008719 ##13	pafah1b3 (ENSSMAG00000008691) #19	tlr21 (ENSSMAG00000008689)	cnfn (ENSSMAG00000030112)	cxcr3.2 (ENSSMAG00000030929)	cxcr3.3 (ENSSMAG00000008640)	ENSSMAG00000027561	ENSSMAG00000008604	ENSSMAG00000008527 #17	ENSSMAG00000036897	ENSSMAG00000008460 ##30
Tongue sole	MODERN SPECIES	4	ENSCSEG00000019674	ino80e (ENSCSEG00000019667)	ENSCSEG00000019662	vars1 (ENSCSEG00000019652)	abhd16a (ENSCSEG00000019629)	ENSCSEG00000019617	ENSCSEG00000019610	ENSCSEG00000019601	rabac1 (ENSCSEG00000019595) #29	dedd1 (ENSCSEG00000019591) #23	POU2F2 (ENSCSEG00000019584) #24	ERF (ENSCSEG00000019582) #21	ENSCSEG00000019560 #20	ENSCSEG00000019554	ZNF526 (ENSCSEG00000019528)	gsk3ab (ENSCSEG00000019516) #22	znf574 (ENSCSEG00000019510)	grik5 (ENSCSEG00000019375) #27	ENSCSEG00000019368	zgc:92606 (ENSCSEG00000019366)	ENSCSEG00000019353	ENSCSEG00000019340	trpv6 (ENSCSEG00000019206)	ENSCSEG00000019192	rab42b (ENSCSEG00000019183)	ENSCSEG00000019181	ctps1b (ENSCSEG00000019169)	cited4b (ENSCSEG00000019166)	SCMH1 (ENSCSEG00000019159)	ENSCSEG00000019155	ENSCSEG00000019153
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000165364.a.a.m.b	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Seriola	ANCESTRAL SPECIES	28	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000165364.a.a.m.b	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a.m.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13
Greater amberjack	MODERN SPECIES	88	ino80e (ENSSDUG00000014132)	ENSSDUG00000014150	ENSSDUG00000014158	vars1 (ENSSDUG00000014177)	abhd16a (ENSSDUG00000014250)	ENSSDUG00000014313	ENSSDUG00000014325	ENSSDUG00000014356	ENSSDUG00000014417	rabac1 (ENSSDUG00000014425) #29	dedd1 (ENSSDUG00000014440) #23	ENSSDUG00000014476 #24	ERF (ENSSDUG00000014506) #21	ENSSDUG00000014523 #20	ENSSDUG00000014574	gsk3ab (ENSSDUG00000014593) #22	znf574 (ENSSDUG00000014609)	GRIK5 (ENSSDUG00000014634) #27	ENSSDUG00000014671 ##13
Yellowtail amberjack	MODERN SPECIES	3188			ENSSLDG00000025325	vars1 (ENSSLDG00000025316)	abhd16a (ENSSLDG00000025306)	ENSSLDG00000025303	ENSSLDG00000025301	ENSSLDG00000025300	ENSSLDG00000025289	rabac1 (ENSSLDG00000025287) #29	dedd1 (ENSSLDG00000025284) #23	POU2F2 (ENSSLDG00000025282) #24	ERF (ENSSLDG00000025278) #21	ENSSLDG00000025267 #20	ENSSLDG00000025265	gsk3ab (ENSSLDG00000025257) #22	znf574 (ENSSLDG00000025250)	GRIK5 (ENSSLDG00000025230) #27	ENSSLDG00000025221	ENSSLDG00000025218 ##13
Barramundi perch	MODERN SPECIES	161	ino80e (ENSLCAG00010004384)	ENSLCAG00010004379	ENSLCAG00010004370	vars1 (ENSLCAG00010003374)	abhd16a (ENSLCAG00010003106)	ENSLCAG00010003080	ENSLCAG00010003077	ENSLCAG00010003072	ENSLCAG00010000131	rabac1 (ENSLCAG00010000130) #29	dedd1 (ENSLCAG00010000129) #23	POU2F2 (ENSLCAG00010000128) #24	ENSLCAG00010000127 #21	ENSLCAG00010000126 #20	ENSLCAG00010000125	gsk3ab (ENSLCAG00010000124) #22	znf574 (ENSLCAG00010000123)	GRIK5 (ENSLCAG00010000122) #27	ENSLCAG00010000120	ENSLCAG00010000119 ##13	ENSLCAG00010000118 ##13	ENSLCAG00010000117 ##13	ENSLCAG00010000116 ##13	ENSLCAG00010000115 ##13	ENSLCAG00010000114 ##13	ENSLCAG00010000113 ##13	ENSLCAG00010000111 ##13	pafah1b3 (ENSLCAG00010000110) #19	tlr21 (ENSLCAG00010000109)	cnfn (ENSLCAG00010000108)	cxcr3.2 (ENSLCAG00010000107)
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000163212.B ##30
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.E ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT00950000182774.b.a.b.a.a	ENSGT00940000163212.B ##30	ENSGT00940000161180 #31
Climbing perch	MODERN SPECIES	7	ino80e (ENSATEG00000020318)	ENSATEG00000020296	vars1 (ENSATEG00000020219)	abhd16a (ENSATEG00000028859)	ENSATEG00000020101	ENSATEG00000020083	ENSATEG00000020055	ENSATEG00000020020	ENSATEG00000019917	rabac1 (ENSATEG00000019902) #29	dedd1 (ENSATEG00000019888) #23	ENSATEG00000019821 #24	ENSATEG00000019806 #21	ENSATEG00000019726 #20	ZNF526 (ENSATEG00000019718)	gsk3ab (ENSATEG00000019676) #22	znf574 (ENSATEG00000019636)	ENSATEG00000019579 #27	ENSATEG00000019244 ##13	ENSATEG00000029413 ##13	ENSATEG00000019173 ##13	pafah1b3 (ENSATEG00000026654) #19	tlr21 (ENSATEG00000019150)	cnfn (ENSATEG00000019143)	cxcr3.2 (ENSATEG00000019139)	cxcr3.3 (ENSATEG00000028818)	ENSATEG00000019129	ENSATEG00000029031	ENSATEG00000018991 #17	ENSATEG00000018979	ENSATEG00000018964 ##30
Siamese fighting fish	MODERN SPECIES	7	ENSBSLG00000009917	ENSBSLG00000009900	ino80e (ENSBSLG00000009879)	ENSBSLG00000009867	vars1 (ENSBSLG00000008128)	abhd16a (ENSBSLG00000007876)	ENSBSLG00000007769	ENSBSLG00000007741	ENSBSLG00000007478	rabac1 (ENSBSLG00000007423) #29	dedd1 (ENSBSLG00000007414) #23	POU2F2 (ENSBSLG00000007368) #24	ERF (ENSBSLG00000007352) #21	ENSBSLG00000007263 #20	ENSBSLG00000007248	gsk3ab (ENSBSLG00000006727) #22	znf574 (ENSBSLG00000006312)	GRIK5 (ENSBSLG00000005670) #27	ENSBSLG00000005562 ##13	ENSBSLG00000005532 ##13	ENSBSLG00000005477 ##13	ENSBSLG00000005099 ##13	ENSBSLG00000005054	ENSBSLG00000004977 ##13	ENSBSLG00000004916 ##13	ENSBSLG00000004870 ##13	pafah1b3 (ENSBSLG00000004785) #19	tlr21 (ENSBSLG00000004315)	cnfn (ENSBSLG00000004313)	cxcr3.2 (ENSBSLG00000004311)	cxcr3.3 (ENSBSLG00000004309)
Zig-zag eel	MODERN SPECIES	7	ENSMAMG00000024356	ino80e (ENSMAMG00000003894)	ENSMAMG00000025661	vars1 (ENSMAMG00000003949)	abhd16a (ENSMAMG00000004141)	ENSMAMG00000004239	ENSMAMG00000004282	ENSMAMG00000004305	rabac1 (ENSMAMG00000004422) #29	dedd1 (ENSMAMG00000004448) #23	ENSMAMG00000004475	ENSMAMG00000004493 #24	ENSMAMG00000004553 #21	ENSMAMG00000004571 #20	ENSMAMG00000004684	gsk3ab (ENSMAMG00000004699) #22	znf574 (ENSMAMG00000004742)	ENSMAMG00000004762 #27	ENSMAMG00000004816	ENSMAMG00000004832 ##13	ENSMAMG00000004846 ##13	pafah1b3 (ENSMAMG00000004876) #19	tlr21 (ENSMAMG00000004934)	cnfn (ENSMAMG00000004938)	cxcr3.2 (ENSMAMG00000004964)	cxcr3.3 (ENSMAMG00000004967)	ENSMAMG00000004978	ENSMAMG00000004985	ENSMAMG00000004994 #17	ENSMAMG00000005072	ENSMAMG00000005078 #21
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Tetraodontidae	ANCESTRAL SPECIES	25	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b.c	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.d ##13	ENSGT01100000263479.H.c.a.a.e.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000164807.G.a.a.b	ENSGT00940000160262 #17	ENSGT00940000162179.e.a.b
Tetraodon	MODERN SPECIES	23	tubb5 (ENSTNIG00000008014)	ENSTNIG00000008013	ino80e (ENSTNIG00000008012)	vars1 (ENSTNIG00000008011)	abhd16a (ENSTNIG00000008010)	ENSTNIG00000008009	ENSTNIG00000008008	ENSTNIG00000001377	ENSTNIG00000008007	rabac1 (ENSTNIG00000008006) #29	dedd1 (ENSTNIG00000008005) #23	POU2F2 (ENSTNIG00000008004) #24	ENSTNIG00000006052 #21	ENSTNIG00000003521 #20	ZNF526 (ENSTNIG00000003520)	gsk3ab (ENSTNIG00000003519) #22	znf574 (ENSTNIG00000003518)	GRIK5 (ENSTNIG00000005311) #27	ENSTNIG00000001728 ##13	ENSTNIG00000001432 ##13	ENSTNIG00000005310	rnf144b (ENSTNIG00000005309)	ENSTNIG00000000405	ENSTNIG00000005308	atp6v1c1a (ENSTNIG00000005307)	rida (ENSTNIG00000013296)	azin1a (ENSTNIG00000005306)	ubr5 (ENSTNIG00000013292)	ENSTNIG00000013293	ENSTNIG00000013294	MATN2 (ENSTNIG00000013295)
Fugu	MODERN SPECIES	19	ino80e (ENSTRUG00000012251)	ENSTRUG00000020209	vars1 (ENSTRUG00000012307)	abhd16a (ENSTRUG00000002440)	ENSTRUG00000022250	ENSTRUG00000012546	ENSTRUG00000029247	ENSTRUG00000008243	rabac1 (ENSTRUG00000008124) #29	dedd1 (ENSTRUG00000007969) #23	POU2F2 (ENSTRUG00000007484) #24	ERF (ENSTRUG00000022541) #21	ENSTRUG00000007193 #20	ENSTRUG00000006695	ENSTRUG00000030165	gsk3ab (ENSTRUG00000006315) #22	znf574 (ENSTRUG00000006262)	GRIK5 (ENSTRUG00000005275) #27	ENSTRUG00000004930	ENSTRUG00000004675 ##13	ENSTRUG00000029123	pafah1b3 (ENSTRUG00000023793) #19	ENSTRUG00000021730	tlr21 (ENSTRUG00000004103)	cxcr3.2 (ENSTRUG00000003961)	cxcr3.3 (ENSTRUG00000027195)	CXCR3 (ENSTRUG00000031111)	trim35-28 (ENSTRUG00000001917)	ENSTRUG00000027387	ENSTRUG00000031574	ENSTRUG00000024470 ##30
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Ballan wrasse	MODERN SPECIES	149											POU2F2 (ENSLBEG00000011937) #24	ENSLBEG00000011911 #21	ENSLBEG00000011897 #21	ENSLBEG00000011808 #20	ENSLBEG00000011751	gsk3ab (ENSLBEG00000011727) #22	znf574 (ENSLBEG00000011670)	GRIK5 (ENSLBEG00000011569) #27	ENSLBEG00000011525	ENSLBEG00000011508	ENSLBEG00000011462 ##13	GRIK5 (ENSLBEG00000011326) #27	ENSLBEG00000011270 ##13	ENSLBEG00000011250	ENSLBEG00000011236	ENSLBEG00000011210	ENSLBEG00000011145	ENSLBEG00000011091	ENSLBEG00000011067	ENSLBEG00000011040	ENSLBEG00000011028
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00990000213343	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262 #17
Gilthead seabream	MODERN SPECIES	8	ino80e (ENSSAUG00010025280)	ENSSAUG00010025282	vars1 (ENSSAUG00010025296)	abhd16a (ENSSAUG00010025843)	ENSSAUG00010025852	ENSSAUG00010025860	ENSSAUG00010025989	ENSSAUG00010027263	rabac1 (ENSSAUG00010027265) #29	dedd1 (ENSSAUG00010027268) #23	ENSSAUG00010014944	ERF (ENSSAUG00010014962) #21	ENSSAUG00010014967 #20	ENSSAUG00010014974	ENSSAUG00010014977	gsk3ab (ENSSAUG00010014980) #22	znf574 (ENSSAUG00010015061)	ENSSAUG00010015064	GRIK5 (ENSSAUG00010015085) #27	ENSSAUG00010015129	ENSSAUG00010015131 ##13	ENSSAUG00010015140 ##13	ENSSAUG00010015146 ##13	ENSSAUG00010015152 ##13	ENSSAUG00010015155 ##13	ENSSAUG00010015158 ##13	ENSSAUG00010015162 ##13	ENSSAUG00010015166 ##13	ENSSAUG00010015169 ##13	ENSSAUG00010015174 ##13	pafah1b3 (ENSSAUG00010015175) #19
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000177056.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00990000213343	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262 #17
Large yellow croaker	MODERN SPECIES	488	ENSLCRG00005017897	vars1 (ENSLCRG00005017373)	abhd16a (ENSLCRG00005017356)	ENSLCRG00005017353	ENSLCRG00005017351	ENSLCRG00005017349	ENSLCRG00005017348	ENSLCRG00005009657	rabac1 (ENSLCRG00005009597) #29	dedd1 (ENSLCRG00005009594) #23	ENSLCRG00005009574 #24	ERF (ENSLCRG00005009568) #21	ENSLCRG00005009529 #20	ENSLCRG00005009526	ENSLCRG00005009525	gsk3ab (ENSLCRG00005009414) #22	znf574 (ENSLCRG00005009393)	GRIK5 (ENSLCRG00005008415) #27	ENSLCRG00005008365 ##13	ENSLCRG00005008353	ENSLCRG00005008350	ENSLCRG00005008347	bsk146 (ENSLCRG00005008345)	ENSLCRG00005008344	ENSLCRG00005008189	dhrs7cb (ENSLCRG00005008185)	ENSLCRG00005008184	hs3st3l (ENSLCRG00005008183)	ENSLCRG00005008182	GLP2R (ENSLCRG00005008181)	PTS (ENSLCRG00005008180)
European seabass	MODERN SPECIES	6	ENSDLAG00005002925	ENSDLAG00005002885	ENSDLAG00005002808	ENSDLAG00005002717	vars1 (ENSDLAG00005001978)	ENSDLAG00005001765	ENSDLAG00005001703	ENSDLAG00005001178	rabac1 (ENSDLAG00005001150) #29	dedd1 (ENSDLAG00005001141) #23	ENSDLAG00005001094 #24	ENSDLAG00005001087 #21	ENSDLAG00005035075 #20	ENSDLAG00005001022	ENSDLAG00005001017	gsk3ab (ENSDLAG00005000993) #22	znf574 (ENSDLAG00005000982)	ENSDLAG00005000978	ENSDLAG00005000902 #27	ENSDLAG00005034004	ENSDLAG00005000848	ENSDLAG00005000831 ##13	ENSDLAG00005013446 ##13	pafah1b3 (ENSDLAG00005000824) #19	tlr21 (ENSDLAG00005000820)	cxcr3.2 (ENSDLAG00005027937)	cxcr3.3 (ENSDLAG00005033844)	ENSDLAG00005032808	ENSDLAG00005000756 #17	ENSDLAG00005000794	ENSDLAG00005000744 ##30
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Perciformes_a	ANCESTRAL SPECIES	3	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.a.e.a ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Pike perch	MODERN SPECIES	15	ENSSLUG00000024097	ENSSLUG00000024106	ino80e (ENSSLUG00000024114)	ENSSLUG00000024121	vars1 (ENSSLUG00000024188)	abhd16a (ENSSLUG00000024689)	ENSSLUG00000024732	ENSSLUG00000024738	ENSSLUG00000024859	rabac1 (ENSSLUG00000025342) #29	dedd1 (ENSSLUG00000025343) #23	POU2F2 (ENSSLUG00000025348) #24	ERF (ENSSLUG00000025350) #21	ENSSLUG00000025358 #20	ENSSLUG00000025374	gsk3ab (ENSSLUG00000025383) #22	znf574 (ENSSLUG00000025393)	GRIK5 (ENSSLUG00000025400) #27	ENSSLUG00000025407	ENSSLUG00000025414 ##13	ENSSLUG00000025420 ##13
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000004909	ino80e (ENSCGOG00000004917)	ENSCGOG00000004924	vars1 (ENSCGOG00000004968)	abhd16a (ENSCGOG00000006827)	ENSCGOG00000006919	ENSCGOG00000006922	ENSCGOG00000006937	ENSCGOG00000007631	rabac1 (ENSCGOG00000007632) #29	dedd1 (ENSCGOG00000007634) #23	POU2F2 (ENSCGOG00000007638) #24	ENSCGOG00000007650 #21	ENSCGOG00000007663 #20	ENSCGOG00000007734	gsk3ab (ENSCGOG00000007758) #22	znf574 (ENSCGOG00000008739)	grik5 (ENSCGOG00000008765) #27	ENSCGOG00000009619	ENSCGOG00000009622	ENSCGOG00000009627 ##13	ENSCGOG00000009658 ##13	ENSCGOG00000009665 ##13	ENSCGOG00000009669 ##13	pafah1b3 (ENSCGOG00000009682) #19	ENSCGOG00000009701	tlr21 (ENSCGOG00000009705)	cnfn (ENSCGOG00000009707)	cxcr3.2 (ENSCGOG00000009727)	cxcr3.3 (ENSCGOG00000009732)	CXCR3 (ENSCGOG00000009741)
Cottioidei	ANCESTRAL SPECIES	7	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a.h	ENSGT00940000160262 #17	ENSGT00940000162179.e.a.b
Stickleback	MODERN SPECIES	19	ENSGACG00000009627	ino80e (ENSGACG00000009624)	ENSGACG00000009618	vars1 (ENSGACG00000009601)	abhd16a (ENSGACG00000009564)	ENSGACG00000009560	ENSGACG00000009524	ENSGACG00000009520	rabac1 (ENSGACG00000009485) #29	dedd1 (ENSGACG00000009481) #23	ENSGACG00000009471 #24	ERF (ENSGACG00000009467) #21	ENSGACG00000009452 #20	ENSGACG00000009451	ZNF526 (ENSGACG00000009449)	gsk3ab (ENSGACG00000009447) #22	znf574 (ENSGACG00000009439)	GRIK5 (ENSGACG00000009427) #27	ENSGACG00000009425	ENSGACG00000009423	ENSGACG00000009412 ##13	ENSGACG00000009407	pafah1b3 (ENSGACG00000009368) #19	tlr21 (ENSGACG00000009364)	cnfn (ENSGACG00000009361)	rundc3b (ENSGACG00000009330)	abcb4 (ENSGACG00000009299)	crot (ENSGACG00000009281)	crot (ENSGACG00000009260)	rpp38 (ENSGACG00000009258)	nmt2 (ENSGACG00000009238)
Lumpfish	MODERN SPECIES	7	ENSCLMG00005006644	ino80e (ENSCLMG00005006649)	ENSCLMG00005006652	vars1 (ENSCLMG00005006666)	abhd16a (ENSCLMG00005007856)	ENSCLMG00005009232	ENSCLMG00005009233	ENSCLMG00005009247	ENSCLMG00005013870	rabac1 (ENSCLMG00005013871) #29	dedd1 (ENSCLMG00005013872) #23	POU2F2 (ENSCLMG00005013873) #24	ENSCLMG00005013881 #21	ENSCLMG00005013884 #20	ZNF526 (ENSCLMG00005013913)	gsk3ab (ENSCLMG00005013919) #22	znf574 (ENSCLMG00005014158)	GRIK5 (ENSCLMG00005014159) #27	ENSCLMG00005014160 ##13	ENSCLMG00005014161 ##13	ENSCLMG00005014164	ENSCLMG00005014167 ##13	ENSCLMG00005014169 ##13	ENSCLMG00005014171 ##13	pafah1b3 (ENSCLMG00005014175) #19	tlr21 (ENSCLMG00005014176)	cnfn (ENSCLMG00005014177)	cxcr3.2 (ENSCLMG00005014178)	cxcr3.3 (ENSCLMG00005014180)	CXCR3 (ENSCLMG00005014181)	trim35-28 (ENSCLMG00005014182)
Ovalentaria	ANCESTRAL SPECIES	3	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Atherinomorphae	ANCESTRAL SPECIES		ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17
Oryzias	ANCESTRAL SPECIES	2	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17
Oryzias_b	ANCESTRAL SPECIES	1	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000161799 #26	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778.c	ENSGT01100000263479.H.c.a.a.f.a ##13	ENSGT01030000234778.d	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f.b ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17
Javanese ricefish	MODERN SPECIES	7	ENSOJAG00000015433	ino80e (ENSOJAG00000015438)	ENSOJAG00000015446	vars1 (ENSOJAG00000015493)	abhd16a (ENSOJAG00000016759)	ENSOJAG00000017016	ENSOJAG00000017200	ENSOJAG00000017356	ENSOJAG00000019188	rabac1 (ENSOJAG00000019200) #29	dedd1 (ENSOJAG00000019215) #23	POU2F2 (ENSOJAG00000019247) #24	ERF (ENSOJAG00000019256) #21	ENSOJAG00000019275 #20	ZNF574 (ENSOJAG00000019446) #26	gsk3ab (ENSOJAG00000019454) #22	znf574 (ENSOJAG00000019528)	GRIK5 (ENSOJAG00000019687) #27	ENSOJAG00000020294	ENSOJAG00000020311	ENSOJAG00000020323 ##13	ENSOJAG00000020348 ##13	ENSOJAG00000020380 ##13	pafah1b3 (ENSOJAG00000020513) #19	tlr21 (ENSOJAG00000020516)	cnfn (ENSOJAG00000020519)	cxcr3.2 (ENSOJAG00000020523)	cxcr3.3 (ENSOJAG00000020524)	CXCR3 (ENSOJAG00000020528)	trim35-28 (ENSOJAG00000020531)	MEGF8 (ENSOJAG00000020538) #17
Indian medaka	MODERN SPECIES	5	ENSOMEG00000014860	ino80e (ENSOMEG00000014887)	ENSOMEG00000014895	vars1 (ENSOMEG00000015016)	abhd16a (ENSOMEG00000015125)	ENSOMEG00000015172	ENSOMEG00000015221	ENSOMEG00000015242	ENSOMEG00000015304	rabac1 (ENSOMEG00000015326) #29	dedd1 (ENSOMEG00000015383) #23	POU2F2 (ENSOMEG00000015477) #24	ERF (ENSOMEG00000015517) #21	ENSOMEG00000015577 #20	ZNF574 (ENSOMEG00000015611) #26	gsk3ab (ENSOMEG00000000943) #22	znf574 (ENSOMEG00000015669)	GRIK5 (ENSOMEG00000015786) #27	ENSOMEG00000015827	ENSOMEG00000015837	ENSOMEG00000015847	ENSOMEG00000015887 ##13	ENSOMEG00000015920 ##13	ENSOMEG00000015985 ##13	ENSOMEG00000016037 ##13	ENSOMEG00000016072 ##13	ENSOMEG00000016141	pafah1b3 (ENSOMEG00000016190) #19	tlr21 (ENSOMEG00000016214)	cxcr3.2 (ENSOMEG00000016226)	cnfn (ENSOMEG00000016247)
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778.e.a	ENSGT01030000234778.f	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.g	ENSGT01030000234583.a.a.c.a.a
Chinese medaka	MODERN SPECIES	467	ENSOSIG00000005254	ENSOSIG00000005259	ENSOSIG00000005260	ino80e (ENSOSIG00000005261)	ENSOSIG00000005262	abhd16a (ENSOSIG00000005524)	ENSOSIG00000005535	ENSOSIG00000005536	ENSOSIG00000005652	rabac1 (ENSOSIG00000014878) #29	dedd1 (ENSOSIG00000014887) #23	POU2F2 (ENSOSIG00000014900) #24	ERF (ENSOSIG00000014913) #21	ENSOSIG00000014916 #20	ENSOSIG00000014918	gsk3ab (ENSOSIG00000014929) #22	znf574 (ENSOSIG00000015034)	GRIK5 (ENSOSIG00000015051) #27
Japanese Medaka HdrR	MODERN SPECIES	7	ino80e (ENSORLG00000030515)	ENSORLG00000013023	vars1 (ENSORLG00000013063)	abhd16a (ENSORLG00000013112)	g6fl (ENSORLG00000022733)	ENSORLG00000013133	ENSORLG00000013191	rabac1 (ENSORLG00000013202) #29	dedd1 (ENSORLG00000013218) #23	dedd1 (ENSORLG00000026809) #23	POU2F2 (ENSORLG00000013228) #24	ERF (ENSORLG00000023273) #21	ENSORLG00000013259 #20	ZNF574 (ENSORLG00000013290) #26	ENSORLG00000030079	gsk3ab (ENSORLG00000013330) #22	znf574 (ENSORLG00000013344)	GRIK5 (ENSORLG00000013374) #27	ENSORLG00000024119	ENSORLG00000027323	ENSORLG00000024791 ##13	ENSORLG00000023372 ##13	ENSORLG00000013389 ##13	pafah1b3 (ENSORLG00000028084) #19	ENSORLG00000024080	tlr21 (ENSORLG00000013437)	ENSORLG00000013448	cxcr3.2 (ENSORLG00000013459)	cxcr3.3 (ENSORLG00000022397)	ENSORLG00000013488	ENSORLG00000013468
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.b ##13	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f
Cyprinodontoidei	ANCESTRAL SPECIES		ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.a.h.a ##13	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a
NAME_4	ANCESTRAL SPECIES	1	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.c.a.a.e.a.g.a ##13
Mummichog	MODERN SPECIES	2274	ino80e (ENSFHEG00000010720)	ENSFHEG00000010686	vars1 (ENSFHEG00000010672)	abhd16a (ENSFHEG00000010472)	ENSFHEG00000010355	ENSFHEG00000010332	ENSFHEG00000010295	ENSFHEG00000010158	rabac1 (ENSFHEG00000010151) #29	dedd1 (ENSFHEG00000010142) #23	ENSFHEG00000010128	ENSFHEG00000010115 #24	ENSFHEG00000010107 #21	ENSFHEG00000000225 #20	ZNF574 (ENSFHEG00000010085) #26	gsk3ab (ENSFHEG00000010034) #22	znf574 (ENSFHEG00000010018)	GRIK5 (ENSFHEG00000009991) #27	ENSFHEG00000009929 ##13
Sheepshead minnow	MODERN SPECIES	1332													ENSCVAG00000015143 #21	ENSCVAG00000015136 #20	ENSCVAG00000015110	gsk3ab (ENSCVAG00000015103) #22	znf574 (ENSCVAG00000015092)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.a.h.a ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a	ENSGT01050000244848.B.a.b.f.d	ENSGT01030000234583.a.a.c.a.a
Platyfish	MODERN SPECIES	17	ENSXMAG00000028687	ino80e (ENSXMAG00000010963)	ENSXMAG00000010961	vars1 (ENSXMAG00000010927)	abhd16a (ENSXMAG00000028465)	ENSXMAG00000010892	ENSXMAG00000022421	ENSXMAG00000010837	rabac1 (ENSXMAG00000010832) #29	dedd1 (ENSXMAG00000010827) #23	ENSXMAG00000010823 #24	ERF (ENSXMAG00000010816) #21	ENSXMAG00000028190 #20	ZNF526 (ENSXMAG00000010814)	ENSXMAG00000021247	gsk3ab (ENSXMAG00000010809) #22	znf574 (ENSXMAG00000010807)	GRIK5 (ENSXMAG00000010792) #27	ENSXMAG00000027785	ENSXMAG00000025791 ##13	ENSXMAG00000029163	ENSXMAG00000026547 ##13	ENSXMAG00000010791 ##13	ENSXMAG00000027323 ##13	ENSXMAG00000010786 ##13	pafah1b3 (ENSXMAG00000010774) #19	ENSXMAG00000028662	tlr21 (ENSXMAG00000010772)	cnfn (ENSXMAG00000010770)	cxcr3.2 (ENSXMAG00000006858)	cxcr3.3 (ENSXMAG00000006856)
Poecilia	ANCESTRAL SPECIES		ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.a.h.a.b ##13	ENSGT01100000263479.H.c.a.a.e.a.h.b.a.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f.c.b	ENSGT01050000244848.B.a.b.f.c.a	ENSGT01050000244848.B.a.b.f.d
Guppy	MODERN SPECIES	446	ENSPREG00000013171	ino80e (ENSPREG00000013188)	ENSPREG00000013220	vars1 (ENSPREG00000013264)	abhd16a (ENSPREG00000013335)	ENSPREG00000013451	ENSPREG00000013495	ENSPREG00000013522	ENSPREG00000013567	rabac1 (ENSPREG00000013578) #29	dedd1 (ENSPREG00000013603) #23	ENSPREG00000013636	ERF (ENSPREG00000013694) #21	ENSPREG00000013757 #20	ENSPREG00000013836	gsk3ab (ENSPREG00000013855) #22	znf574 (ENSPREG00000013888)	GRIK5 (ENSPREG00000013939) #27	ENSPREG00000013968 ##13	ENSPREG00000013999 ##13	ENSPREG00000014021 ##13	ENSPREG00000014031 ##13	ENSPREG00000014059 ##13	ENSPREG00000014093 ##13	ENSPREG00000014138 ##13	pafah1b3 (ENSPREG00000014160) #19	cxcr3.3 (ENSPREG00000014182)	tlr21 (ENSPREG00000014195)	cnfn (ENSPREG00000014213)	cxcr3.2 (ENSPREG00000014218)	ENSPREG00000014225
NAME_6	ANCESTRAL SPECIES	24	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a.g	ENSGT00940000165364.a.a.h	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00940000177554	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.E ##13	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##13
Amazon molly	MODERN SPECIES	286	ino80e (ENSPFOG00000015663)	ENSPFOG00000015682	vars1 (ENSPFOG00000015690)	abhd16a (ENSPFOG00000015783)	ENSPFOG00000015828	ENSPFOG00000015850	ENSPFOG00000015870	ENSPFOG00000015883	ENSPFOG00000016054	rabac1 (ENSPFOG00000016055) #29	dedd1 (ENSPFOG00000016064) #23	ENSPFOG00000016074	ERF (ENSPFOG00000023850) #21	ENSPFOG00000016231 #20	ENSPFOG00000016258	gsk3ab (ENSPFOG00000016170) #22	znf574 (ENSPFOG00000016263)	GRIK5 (ENSPFOG00000016273) #27	ENSPFOG00000023784 ##13	ENSPFOG00000016358 ##13	ENSPFOG00000024838 ##13	ENSPFOG00000016400 ##13
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	1261													ENSPLAG00000001789 #20	ENSPLAG00000001754	ENSPLAG00000001746	gsk3ab (ENSPLAG00000001739) #22	znf574 (ENSPLAG00000001720)	GRIK5 (ENSPLAG00000001700) #27
Sailfin molly	MODERN SPECIES	4027																ENSPLAG00000004983 #22
Aplocheiloidei	ANCESTRAL SPECIES	2	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00970000196884.b	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.a.a.e.a.h.b.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17	ENSGT01100000263491.a.b.a.a.a.a.b.r
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015002299	ENSNFUG00015002310	INO80E (ENSNFUG00015002314)	ENSNFUG00015002318	VARS (ENSNFUG00015002349)	ENSNFUG00015002588	PVRL2 (ENSNFUG00015002595)	ENSNFUG00015002612	ENSNFUG00015002683	RABAC1 (ENSNFUG00015002686) #29	DEDD2 (ENSNFUG00015002697) #23	POU2F2 (ENSNFUG00015002703) #24	ENSNFUG00015002709	ENSNFUG00015002724 #20	ZNF526 (ENSNFUG00015002749)	GSK3AB (ENSNFUG00015002760) #22	znf574 (ENSNFUG00015002814)	GRIK5 (ENSNFUG00015002902) #27	ENSNFUG00015003097	ENSNFUG00015003103 ##13	ENSNFUG00015003110	ENSNFUG00015003117 ##13	ENSNFUG00015003130 ##13	ENSNFUG00015003140	ENSNFUG00015003147 ##13	PAFAH1B3 (ENSNFUG00015003157) #19	tlr21 (ENSNFUG00015003168)	cnfn (ENSNFUG00015003173)	CXCR3.2 (ENSNFUG00015003180)	Nfu_g_1_001121 (ENSNFUG00015003185)	CXCR3 (ENSNFUG00015003187)
Mangrove rivulus	MODERN SPECIES	33	ENSKMAG00000009400	ino80e (ENSKMAG00000009417)	ENSKMAG00000009432	vars1 (ENSKMAG00000009455)	abhd16a (ENSKMAG00000009561)	ENSKMAG00000009638	ENSKMAG00000009679	ENSKMAG00000009734	rabac1 (ENSKMAG00000009847) #29	dedd1 (ENSKMAG00000009886) #23	ENSKMAG00000009941	ERF (ENSKMAG00000010028) #21	ENSKMAG00000010054 #20	ENSKMAG00000010116	ENSKMAG00000010133	gsk3ab (ENSKMAG00000010150) #22	znf574 (ENSKMAG00000010186)	GRIK5 (ENSKMAG00000010219) #27	ENSKMAG00000010263	ENSKMAG00000010305 ##13	ENSKMAG00000010394 ##13	ENSKMAG00000010465 ##13	pafah1b3 (ENSKMAG00000010509) #19	ENSKMAG00000010537	tlr21 (ENSKMAG00000010548)	cnfn (ENSKMAG00000010566)	cxcr3.2 (ENSKMAG00000010579)	ENSKMAG00000010590	CXCR3 (ENSKMAG00000010605)	CXCR3 (ENSKMAG00000010623)	trim35-28 (ENSKMAG00000010647)
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT00940000177666	ENSGT01100000263479.E ##13	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e
Pomacentridae	ANCESTRAL SPECIES	35	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Bicolor damselfish	MODERN SPECIES	829												POU2F2 (ENSSPAG00000023104) #24	ERF (ENSSPAG00000023124) #21	ENSSPAG00000023127 #20	ENSSPAG00000023136	gsk3ab (ENSSPAG00000023137) #22	znf574 (ENSSPAG00000023141)	GRIK5 (ENSSPAG00000023143) #27	ENSSPAG00000000040 ##13
Pomacentridae_A	ANCESTRAL SPECIES	16	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT00940000177666	ENSGT01100000263479.H.c.a.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Amphiprion	ANCESTRAL SPECIES	1	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000179553	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000177554	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.E ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a
Orange clownfish	MODERN SPECIES	21	ENSAPEG00000010778	vars1 (ENSAPEG00000010638)	abhd16a (ENSAPEG00000010611)	ENSAPEG00000010588	ENSAPEG00000010560	ENSAPEG00000010483	ENSAPEG00000010465	ENSAPEG00000010390	rabac1 (ENSAPEG00000010344) #29	dedd1 (ENSAPEG00000010321) #23	POU2F2 (ENSAPEG00000010280) #24	ENSAPEG00000010268 #21	ENSAPEG00000010171 #20	ENSAPEG00000010144	ENSAPEG00000010134	gsk3ab (ENSAPEG00000010112) #22	znf574 (ENSAPEG00000010055)	GRIK5 (ENSAPEG00000009966) #27	ENSAPEG00000009941	ENSAPEG00000009916 ##13	ENSAPEG00000009905 ##13	ENSAPEG00000009842 ##13	pafah1b3 (ENSAPEG00000009798) #19	ENSAPEG00000009773	tlr21 (ENSAPEG00000009767)	cnfn (ENSAPEG00000009758)	cxcr3.2 (ENSAPEG00000009750)	cxcr3.3 (ENSAPEG00000009742)	CXCR3 (ENSAPEG00000009736)	trim35-28 (ENSAPEG00000009729)	MEGF8 (ENSAPEG00000009579) #17
Clown anemonefish	MODERN SPECIES	1300	gdap1 (ENSAOCG00000013252)	JPH1 (ENSAOCG00000013282)	eloca (ENSAOCG00000013291)	ube2wa (ENSAOCG00000013312)	stau2 (ENSAOCG00000013358)	rdh10a (ENSAOCG00000013387)	rpl7 (ENSAOCG00000013452)	ENSAOCG00000013516	rabac1 (ENSAOCG00000002535) #29	dedd1 (ENSAOCG00000013551) #23	ENSAOCG00000013575	POU2F2 (ENSAOCG00000013596) #24	ENSAOCG00000013613 #21	ENSAOCG00000013637 #20	ENSAOCG00000013652	gsk3ab (ENSAOCG00000013659) #22	znf574 (ENSAOCG00000013726)	GRIK5 (ENSAOCG00000013789) #27
Spiny chromis	MODERN SPECIES	1053						abhd16a (ENSAPOG00000006375)	ENSAPOG00000006397	ENSAPOG00000006436	ENSAPOG00000006537	rabac1 (ENSAPOG00000006574) #29	dedd1 (ENSAPOG00000006587) #23	POU2F2 (ENSAPOG00000006627) #24	ERF (ENSAPOG00000006648) #21	ENSAPOG00000006774 #20	ENSAPOG00000000831	gsk3ab (ENSAPOG00000006797) #22	znf574 (ENSAPOG00000006841)
Cichlidae	ANCESTRAL SPECIES	9	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e	ENSGT01050000244848.B.a.b.f	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17
Midas cichlid	MODERN SPECIES	1183	ENSACIG00000013693	ino80e (ENSACIG00000013722)	ENSACIG00000013732	vars1 (ENSACIG00000013752)	abhd16a (ENSACIG00000013811)	ENSACIG00000013938	ENSACIG00000013964	ENSACIG00000014022	ENSACIG00000014081	rabac1 (ENSACIG00000014089) #29	dedd1 (ENSACIG00000014144) #23	ENSACIG00000014171 #24	ERF (ENSACIG00000014200) #21	ENSACIG00000014222 #20	ZNF526 (ENSACIG00000014282)	gsk3ab (ENSACIG00000014333) #22	znf574 (ENSACIG00000014563)	GRIK5 (ENSACIG00000014592) #27	ENSACIG00000014628	ENSACIG00000014639
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778.a.a.a.a	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.a ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b	ENSGT01050000244848.B.a.b.f.l
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	1	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00940000177056.a	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01030000234778.a.a.a.a	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.e.b ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b	ENSGT01050000244848.B.a.b.e.f
Haplochromini	ANCESTRAL SPECIES	6	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##13	ENSGT01100000263479.H.c.a.a.f.i ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l
Burton s mouthbrooder	MODERN SPECIES	338	ENSHBUG00000017030	ENSHBUG00000017041	ino80e (ENSHBUG00000017047)	ENSHBUG00000017086	vars1 (ENSHBUG00000017151)	abhd16a (ENSHBUG00000017246)	ENSHBUG00000017262	ENSHBUG00000017278	ENSHBUG00000017381	rabac1 (ENSHBUG00000017395) #29	dedd1 (ENSHBUG00000017411) #23	POU2F2 (ENSHBUG00000017464) #24	ERF (ENSHBUG00000017480) #21	ENSHBUG00000017524 #20	ZNF526 (ENSHBUG00000017542)	gsk3ab (ENSHBUG00000017570) #22	znf574 (ENSHBUG00000017622)	GRIK5 (ENSHBUG00000017741) #27	ENSHBUG00000017766
Haplochromini_A	ANCESTRAL SPECIES	18	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b ##13	ENSGT01100000263479.H.c.a.a.f.i ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.f	ENSGT01050000244848.B.a.b.f.l
Haplochromini_B	ANCESTRAL SPECIES	6	ENSGT00390000005284.b	ENSGT00940000163587.b	ENSGT00390000011918	ENSGT00530000067342	ENSGT00940000157775	ENSGT00940000160908	ENSGT00990000203786	ENSGT00940000165364.a.a	ENSGT00940000165134.a.b	ENSGT00390000010549 #29	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.e.a #27	ENSGT01100000263479.H.c.b ##13	ENSGT01100000263479.H.c.a.a.f.j.a.b.b.b.b ##13	ENSGT00940000178748	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000177028	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.e.e.a	ENSGT01050000244848.B.a.b.e.e.b.b	ENSGT01050000244848.B.a.b.e.e.b.a	ENSGT01050000244848.B.a.b.e.f
Eastern happy	MODERN SPECIES	2	ENSACLG00000025624	ENSACLG00000025658	ino80e (ENSACLG00000025667)	ENSACLG00000025689	vars1 (ENSACLG00000025699)	abhd16a (ENSACLG00000025756)	ENSACLG00000025805	ENSACLG00000025827	ENSACLG00000025852	rabac1 (ENSACLG00000025956) #29	dedd1 (ENSACLG00000025983) #23	ENSACLG00000025997 #24	ENSACLG00000026069 #21	ENSACLG00000026077 #20	ZNF526 (ENSACLG00000026103)	gsk3ab (ENSACLG00000026113) #22	ENSACLG00000026120	znf574 (ENSACLG00000026124)	GRIK5 (ENSACLG00000026152) #27	ENSACLG00000026217 ##13	ENSACLG00000026247 ##13	ENSACLG00000026285 ##13	ENSACLG00000026328	ENSACLG00000026333 ##13	pafah1b3 (ENSACLG00000026347) #19	ENSACLG00000026366	tlr21 (ENSACLG00000026373)	cnfn (ENSACLG00000026377)	cxcr3.2 (ENSACLG00000026384)	ENSACLG00000026394	cxcr3.3 (ENSACLG00000026405)
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005018283	ENSMZEG00005018294	ino80e (ENSMZEG00005018301)	ENSMZEG00005018309	vars1 (ENSMZEG00005018327)	abhd16a (ENSMZEG00005018365)	ENSMZEG00005018375	ENSMZEG00005018381	ENSMZEG00005018388	rabac1 (ENSMZEG00005018411) #29	dedd1 (ENSMZEG00005018417) #23	POU2F2 (ENSMZEG00005018423) #24	ENSMZEG00005018431 #21	ENSMZEG00005018437 #20	ZNF526 (ENSMZEG00005018444)	gsk3ab (ENSMZEG00005018449) #22	znf574 (ENSMZEG00005000114)	GRIK5 (ENSMZEG00005000191) #27	ENSMZEG00005000311	ENSMZEG00005000346 ##13	ENSMZEG00005000500 ##13	ENSMZEG00005000584 ##13	ENSMZEG00005000636	ENSMZEG00005000774 ##13	ENSMZEG00005001779 ##13	ENSMZEG00005002140	ENSMZEG00005002162 ##13	pafah1b3 (ENSMZEG00005002174) #19	ENSMZEG00005002190	tlr21 (ENSMZEG00005002209)	cnfn (ENSMZEG00005002655)
P. nyererei	MODERN SPECIES	340	mdc1 (ENSPNYG00000022570)	ENSPNYG00000022557	ino80e (ENSPNYG00000022546)	ENSPNYG00000022535	vars1 (ENSPNYG00000022511)	abhd16a (ENSPNYG00000022491)	ENSPNYG00000022474	ENSPNYG00000022465	ENSPNYG00000022440	rabac1 (ENSPNYG00000022415) #29	dedd1 (ENSPNYG00000022404) #23	POU2F2 (ENSPNYG00000022400) #24	ENSPNYG00000022390 #21	ENSPNYG00000022357 #20	ZNF526 (ENSPNYG00000022345)	gsk3ab (ENSPNYG00000022336) #22	znf574 (ENSPNYG00000022327)	GRIK5 (ENSPNYG00000022315) #27	ENSPNYG00000022308	ENSPNYG00000022302 ##13	ENSPNYG00000022297 ##13	ENSPNYG00000022292	ENSPNYG00000022288 ##13
Lyretail cichlid	MODERN SPECIES	386	ENSNBRG00000020644	ino80e (ENSNBRG00000020630)	ENSNBRG00000020615	vars1 (ENSNBRG00000020520)	abhd16a (ENSNBRG00000020472)	ENSNBRG00000020440	ENSNBRG00000020430	ENSNBRG00000020419	ENSNBRG00000020364	rabac1 (ENSNBRG00000020348) #29	dedd1 (ENSNBRG00000020342) #23	ENSNBRG00000020286 #24	ERF (ENSNBRG00000020271) #21	ENSNBRG00000020200 #20	ZNF526 (ENSNBRG00000020159)	gsk3ab (ENSNBRG00000020141) #22	znf574 (ENSNBRG00000020102)	GRIK5 (ENSNBRG00000020073) #27	ENSNBRG00000020064	ENSNBRG00000020052 ##13	ENSNBRG00000020047	ENSNBRG00000020030	ENSNBRG00000020020	ENSNBRG00000020007 ##13
Nile tilapia	MODERN SPECIES	2	ENSONIG00000013062	ENSONIG00000034064	ino80e (ENSONIG00000036631)	ENSONIG00000041521	vars1 (ENSONIG00000013064)	abhd16a (ENSONIG00000033573)	ENSONIG00000013069	ENSONIG00000013078	ENSONIG00000013081	rabac1 (ENSONIG00000013101) #29	dedd1 (ENSONIG00000013103) #23	ENSONIG00000013106 #24	ERF (ENSONIG00000030500) #21	ENSONIG00000013108 #20	ENSONIG00000013111	gsk3ab (ENSONIG00000039856) #22	znf574 (ENSONIG00000013113)	GRIK5 (ENSONIG00000013114) #27	ENSONIG00000037846	ENSONIG00000036740	ENSONIG00000042288 ##13	ENSONIG00000013123 ##13	ENSONIG00000027857 ##13	ENSONIG00000013122 ##13	ENSONIG00000013128 ##13	ENSONIG00000037954 ##13	ENSONIG00000013127 ##13	ENSONIG00000013126 ##13	ENSONIG00000011464 ##13	pafah1b3 (ENSONIG00000011461) #19	cnfn (ENSONIG00000035573)
Protacanthopterygii	ANCESTRAL SPECIES	1	ENSGT00950000183126.b.a	ENSGT00940000165886	ENSGT00940000159480	ENSGT00940000155088.b.a.b	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b.l	ENSGT00940000153675.a.a.a.a.a.a	ENSGT00390000005023.a	ENSGT00950000182805.a.a.b.a.c.a	ENSGT00940000153615.b	ENSGT00390000008714.b #23	ENSGT00940000160115.a.a #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.c #27	ENSGT01100000263956	ENSGT01100000263479.H.c.b.i ##13	ENSGT01100000263479.H.c.b.j ##13	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.G ##13	ENSGT00950000183199.a.b #19	ENSGT00940000163576	ENSGT00940000161202	ENSGT01050000244848.B.b	ENSGT01050000244848.B.a.b.f.b	ENSGT01050000244848.B.a.b.f.a	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262 #17
Northern pike	MODERN SPECIES	19	CHD4 (ENSELUG00000018086)	wnt4b (ENSELUG00000018120)	cdc42l (ENSELUG00000018148)	mlf2 (ENSELUG00000018167)	ENO2 (ENSELUG00000000762)	ENSELUG00000018234	ENSELUG00000018251	ENSELUG00000018273	ENSELUG00000031348	dedd1 (ENSELUG00000018333) #23	ENSELUG00000000792	ENSELUG00000034402	ERF (ENSELUG00000000796) #21	ENSELUG00000018666 #20	ZNF526 (ENSELUG00000018737)	gsk3ab (ENSELUG00000018799) #22	znf574 (ENSELUG00000018826)	GRIK5 (ENSELUG00000018932) #27	ENSELUG00000030022	ENSELUG00000018956 ##13	ENSELUG00000019003 ##13	pafah1b3 (ENSELUG00000019030) #19	tlr21 (ENSELUG00000019043)	cnfn (ENSELUG00000019052)	cxcr3.2 (ENSELUG00000034089)	ENSELUG00000019065	CXCR3 (ENSELUG00000019067)	trim35-28 (ENSELUG00000019085)	MEGF8 (ENSELUG00000019161) #17	ENSELUG00000019204	ENSELUG00000032321
Salmoninae	ANCESTRAL SPECIES	5	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i	ENSGT00940000166118	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.r	ENSGT00950000182805.a.a.b.a.c.a.c.b	ENSGT00940000153615.b.b	ENSGT00390000008714.b.f #23	ENSGT00940000160115.a.a.c #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.c.b #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a ##13	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.H.c.b.j.b.b ##13	ENSGT00940000177666	ENSGT01100000263479.G.r ##13	ENSGT00950000183199.a.b.a.b.b.b #19	ENSGT00950000183199.a.b.a.a #19	ENSGT00940000163576.k.b	ENSGT00940000161202	ENSGT01050000244848.B.b.e	ENSGT01050000244848.B.a.b.f.b.b	ENSGT01050000244848.B.a.b.f.a.b
Salmoninae_a	ANCESTRAL SPECIES	178											ENSGT00390000008714.b.e.a.b #23	ENSGT00940000160115.a.a.d #24	ENSGT00940000157292.fc.b #21	ENSGT00940000159960.d #20	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b #22	ENSGT00940000166708	ENSGT00940000158852.c.b #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a ##13	ENSGT01100000263479.H.c.b.j.b.b ##13	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.G.q.b.b ##13
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	57	ENSGT00940000153675.a.a.a.a.b.l.a	ENSGT00390000005023.a.q	ENSGT00950000182805.a.a.b.a.c.a.c.a	ENSGT00940000155088.b.a.b.j.a.b	ENSGT00940000166118.f	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.r	ENSGT00950000182805.a.a.b.a.c.a.c.b	ENSGT00940000153615.b.b	ENSGT00980000198710.e.b.a.a.b.b.b	ENSGT00390000008714.b.e.a.b #23	ENSGT00940000160115.a.a.d #24	ENSGT00940000157292.fc.b.c #21	ENSGT00940000159960.d.b #20	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b.g #22	ENSGT00940000166708.q.a	ENSGT00940000158852.c.b #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a ##13	ENSGT01100000263479.H.c.a.a.a.b ##13	ENSGT00940000167162	ENSGT00950000183199.a.b.a.a #19	ENSGT00940000163576.k.b	ENSGT00940000161202	ENSGT01050000244848.B.b.e	ENSGT01050000244848.B.a.b.f.b.b	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01030000234583.a.a.c.a.a	ENSGT00940000160262.i.b #17	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b
River trout	MODERN SPECIES	22	ENSSTUG00000034729	cmtm7 (ENSSTUG00000034710)	cmtm6 (ENSSTUG00000034703)	DYNC1LI1 (ENSSTUG00000033334)	ENSSTUG00000033275	ino80c (ENSSTUG00000033257)	ENSSTUG00000033252	ENSSTUG00000033239	ENSSTUG00000033229	ENSSTUG00000033224	ENSSTUG00000033218	dedd1 (ENSSTUG00000033194) #23	ENSSTUG00000033114 #21	ENSSTUG00000033082 #20	ZNF526 (ENSSTUG00000033070)	gsk3ab (ENSSTUG00000032976) #22	znf574 (ENSSTUG00000032963)	GRIK5 (ENSSTUG00000032667) #27	nxpe3 (ENSSTUG00000032643)	ENSSTUG00000032623 ##13	ENSSTUG00000032610 ##13	ENSSTUG00000032595	ENSSTUG00000032487 ##13	PAFAH1B3 (ENSSTUG00000032462) #19	ENSSTUG00000032134	PAFAH1B3 (ENSSTUG00000032070) #19	tlr21 (ENSSTUG00000032061)	cnfn (ENSSTUG00000032051)	cxcr3.2 (ENSSTUG00000032022)	ENSSTUG00000032004	CXCR3 (ENSSTUG00000031982)
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000003871	ENSSSAG00000117865	rbp5 (ENSSSAG00000074455)	ptpn6 (ENSSSAG00000071957)	ENSSSAG00000062647	ENSSSAG00000100792	ENSSSAG00000003430	ENSSSAG00000114829	ENSSSAG00000087244	dedd1 (ENSSSAG00000059305) #23	ENSSSAG00000097009	ENSSSAG00000115246 #24	ENSSSAG00000059116 #21	ENSSSAG00000107687 #20	ZNF526 (ENSSSAG00000114243)	gsk3ab (ENSSSAG00000058347) #22	znf574 (ENSSSAG00000003807)	ENSSSAG00000057062 #27	ENSSSAG00000003798	ENSSSAG00000051319 ##13	ENSSSAG00000110201	ENSSSAG00000051309 ##13	ENSSSAG00000003818 ##13	ENSSSAG00000051303	ENSSSAG00000051243 #19	ENSSSAG00000094063 ##13	ENSSSAG00000112140 ##13	ENSSSAG00000051209 #19	ENSSSAG00000097508 ##13	ENSSSAG00000097201 #19	ceacam1 (ENSSSAG00000095405)
Salmo	ANCESTRAL SPECIES	77	ENSGT00390000018821.e	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a.d	ENSGT00940000157473.b.b.m.b.a	ENSGT00940000157473.b.b.m.a.b	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a	ENSGT00940000165886.g	ENSGT00940000159480.c.a	ENSGT00390000008714.b.e.a.a #23	ENSGT00940000160115.a.a.c.a.a #24	ENSGT00940000157292.fc.b.d #21	ENSGT00940000159960.d.a #20	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.h #22	ENSGT00940000166708.q.b	ENSGT00940000158852.c.a #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.b	ENSGT01100000263956	ENSGT01100000263479.H.c.b.i.a.b ##13	ENSGT00950000183199.a.b.a.b.b.a #19	ENSGT00940000154614.ke.b	ENSGT01100000263479.H.c.a.a.a.a.b ##13	ENSGT01100000263479.H.c.b.i.a.a ##13	ENSGT01100000263479.H.c.a.a.a.a.a ##13	ENSGT01100000263479.G.q.a ##13	ENSGT00950000183199.a.b.b #19	ENSGT00940000163576.k.a	ENSGT01050000244848.B.b.f	ENSGT01050000244848.B.a.b.f.b.a
Atlantic salmon	MODERN SPECIES	11	CDC42 (ENSSSAG00000106298)	mlf2 (ENSSSAG00000099573)	ENSSSAG00000059449	ENSSSAG00000110649	ENSSSAG00000116781	ENSSSAG00000059358	ENSSSAG00000059350	ENSSSAG00000099931	dedd2 (ENSSSAG00000003442) #23	ENSSSAG00000059145 #24	ENSSSAG00000083743	ENSSSAG00000087967 #21	ENSSSAG00000091877	ENSSSAG00000107403 #20	ENSSSAG00000059107	gsk3ab (ENSSSAG00000092306) #22	znf574 (ENSSSAG00000096417)	ENSSSAG00000102265 #27	ENSSSAG00000084182	ENSSSAG00000121983	ENSSSAG00000086972	ENSSSAG00000039240 ##13	ENSSSAG00000114015 ##13	ENSSSAG00000083894	ENSSSAG00000057280 ##13	ENSSSAG00000112024 ##13	ENSSSAG00000111321 ##13	ENSSSAG00000082131 ##13	ENSSSAG00000057331	ENSSSAG00000114240 ##13	ENSSSAG00000104670
River trout	MODERN SPECIES	30	rbp5 (ENSSTUG00000018217)	ptpn6 (ENSSTUG00000018319)	wnt4b (ENSSTUG00000018771)	cdc42l (ENSSTUG00000018784)	mlf2 (ENSSTUG00000018819)	ENO2 (ENSSTUG00000038009)	ENSSTUG00000038148	ENSSTUG00000038150	ENSSTUG00000038158	ENSSTUG00000038171	dedd1 (ENSSTUG00000038183) #23	POU2F2 (ENSSTUG00000038251) #24	ENSSTUG00000038289 #21	ENSSTUG00000038409 #20	ZNF526 (ENSSTUG00000038472)	gsk3ab (ENSSTUG00000038504) #22	znf574 (ENSSTUG00000038565)	GRIK5 (ENSSTUG00000038580) #27	ENSSTUG00000038699	ENSSTUG00000038708	ENSSTUG00000038725	ENSSTUG00000038734	ENSSTUG00000038750 ##13	ENSSTUG00000038837 ##13	ENSSTUG00000038897 ##13	ENSSTUG00000038910 ##13	ENSSTUG00000038942 ##13	ENSSTUG00000039144	ENSSTUG00000039146	PAFAH1B3 (ENSSTUG00000039161) #19	PAFAH1B3 (ENSSTUG00000039237) #19
Oncorhynchus	DUPLICATION
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00950000183084.b.a.a.a.e.b	ENSGT00940000157473.b.b.m.b.a	ENSGT00950000183084.b.a.a.a.f	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a.a	ENSGT00940000165886.h	ENSGT00940000159480.d.a.b	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000166118.d	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000160115.a.a.d #24	ENSGT00940000157292.fc.b.f #21	ENSGT00940000159960.d.c #20	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b.i.a #22	ENSGT00940000166708.o.a	ENSGT00940000158852.c.b #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a ##13	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.G.q.b.b ##13	ENSGT01000000216948	ENSGT01050000244848.B.b.e	ENSGT01050000244848.B.a.b.f.b.b.c	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01030000234583.a.a.c.a.a.t.a	ENSGT00940000160262.i.d #17	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.a.a	ENSGT00940000161180.m.b #31
Oncorhynchus_a	ANCESTRAL SPECIES	97	ENSGT00940000164382.b.b.c	ENSGT00940000160453.b	ENSGT00950000183084.b.a.a.a.e.b	ENSGT00950000183084.b.a.a.a.f	ENSGT00940000157473.b.b.m.a	ENSGT00950000183084.b.a.a.b	ENSGT00950000183126.b.a.u.a.a	ENSGT00940000165886.h	ENSGT00940000159480.d.a.b	ENSGT00940000155088.b.a.b.i.a	ENSGT00940000166118.d	ENSGT00940000153675.a.a.a.a.b.l.a.a	ENSGT00940000157292.fc.b.f #21	ENSGT00940000159960.d.c #20	ENSGT00940000162624.d	ENSGT00520000055635.c.b.b.i.a #22	ENSGT00940000166708.o.a	ENSGT00940000158852.c.b #27	ENSGT00950000182866.D.d.a.c.a.i.a.b.a.a	ENSGT01100000263479.H.c.b.j.a ##13	ENSGT01100000263479.H.c.a.a ##13	ENSGT01100000263479.G.q.b.b ##13	ENSGT01000000216948	ENSGT01050000244848.B.b.e	ENSGT01050000244848.B.a.b.f.b.b.c	ENSGT01050000244848.B.a.b.f.a.b	ENSGT01050000244848.B.a.b.f.b.a	ENSGT01030000234583.a.a.c.a.a.t.a	ENSGT00940000160262.i.d #17	ENSGT01100000263491.a.b.a.a.a.a.b.u.b.b	ENSGT00940000160262.j #17
Coho salmon	MODERN SPECIES	4	ENSOKIG00005035543	ENSOKIG00005035540	ENSOKIG00005035534	ENSOKIG00005035530	dedd1 (ENSOKIG00005035511) #23	ENSOKIG00005035499	ENSOKIG00005035487	ENSOKIG00005035481	ENSOKIG00005035461	ENSOKIG00005035452	ENSOKIG00005035315 #24	ENSOKIG00005035297	ERF (ENSOKIG00005035279) #21	ENSOKIG00005035103 #20	ENSOKIG00005035080	gsk3ab (ENSOKIG00005034799) #22	znf574 (ENSOKIG00005034607)	GRIK5 (ENSOKIG00005034102) #27	NXPE3 (ENSOKIG00005034072)	ENSOKIG00005034031 ##13	ENSOKIG00005033971 ##13	ENSOKIG00005033934 ##13	ENSOKIG00005033868 ##13	PAFAH1B3 (ENSOKIG00005033825) #19	ENSOKIG00005033744	ENSOKIG00005033716	cxcr3.2 (ENSOKIG00005033710)	ENSOKIG00005033684	ENSOKIG00005033674	CXCR3 (ENSOKIG00005033655)	ENSOKIG00005015886
Rainbow trout	MODERN SPECIES	11	wnt4b (ENSOMYG00000026253)	cdc42l (ENSOMYG00000026263)	mlf2 (ENSOMYG00000026278)	ENSOMYG00000056821	ENSOMYG00000069662	ENSOMYG00000026293	ENSOMYG00000026297	ENSOMYG00000072501	dedd1 (ENSOMYG00000026332) #23	ENSOMYG00000063403	ENSOMYG00000026376 #24	ENSOMYG00000026370 #21	ENSOMYG00000047948	ENSOMYG00000000215 #20	ENSOMYG00000000232	GSK3A (ENSOMYG00000000426) #22	znf574 (ENSOMYG00000000329)	ENSOMYG00000026399 #27	ENSOMYG00000026406	ENSOMYG00000026425 ##13	ENSOMYG00000026459 ##13	ENSOMYG00000058079	ENSOMYG00000076740	ENSOMYG00000026530 ##13	ENSOMYG00000026578 ##13	ENSOMYG00000026605 #19	ENSOMYG00000026681 ##13	ENSOMYG00000026870	ENSOMYG00000037793	ENSOMYG00000026881	ENSOMYG00000026910
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.i.b #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.b.b.i.b #22
Coho salmon	MODERN SPECIES	11	ENSOKIG00005025067	wnt4b (ENSOKIG00005025084)	cdc42l (ENSOKIG00005025196)	mlf2 (ENSOKIG00005025264)	ENO2 (ENSOKIG00005025306)	ENSOKIG00005025439	ENSOKIG00005025453	ENSOKIG00005025469	ENSOKIG00005025500	dedd1 (ENSOKIG00005025504) #23	POU2F2 (ENSOKIG00005025518) #24	ERF (ENSOKIG00005025554) #21	ENSOKIG00005025573 #20	ENSOKIG00005000016	ENSOKIG00005000028	gsk3ab (ENSOKIG00005000138) #22	znf574 (ENSOKIG00005000163)	GRIK5 (ENSOKIG00005000322) #27	ENSOKIG00005000479	ENSOKIG00005000485	ENSOKIG00005000505 ##13	ENSOKIG00005000540	ENSOKIG00005000563 ##13	ENSOKIG00005000587 ##13	ENSOKIG00005000664	PAFAH1B3 (ENSOKIG00005000745) #19	ENSOKIG00005000750 #19	ENSOKIG00005000755 ##13	tlr21 (ENSOKIG00005000760)	ENSOKIG00005000764	cxcr3.2 (ENSOKIG00005000774)
Oncorhynchus	ANCESTRAL SPECIES	53	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00950000183084.b.a.a.a.e.a	ENSGT00950000183126.b.a.u.a.b	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i.b	ENSGT00940000166118.c	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00940000160115.a.a.c.a.a #24	ENSGT00940000157292.fc.b.e #21	ENSGT00940000159960.d.d #20	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.j #22	ENSGT00940000166708.o.b	ENSGT00940000158852.c.a #27	ENSGT00950000183199.a.b.b #19	ENSGT00940000163576.l	ENSGT01050000244848.B.b.f	ENSGT01050000244848.B.a.b.f.b.b.d	ENSGT01030000234583.a.a.c.a.a.t.b	ENSGT00940000160262.i.c #17	ENSGT01100000263491.a.b.a.a.a.a.b.u.a.a.a.b	ENSGT00950000182774.b.a.b.a.a.a.b	ENSGT00940000163212.B.e.b ##30	ENSGT00940000161180.m.a #31	ENSGT00940000154363.A.b	ENSGT00730000111056.g.d.a #16	ENSGT00940000153981.B.c.b.a #18
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000029025	wnt4b (ENSOMYG00000029974)	cdc42l (ENSOMYG00000029993)	mlf2 (ENSOMYG00000030031)	ENSOMYG00000030048	ENSOMYG00000054487	ENSOMYG00000000092	ENSOMYG00000000101	ENSOMYG00000000110	dedd1 (ENSOMYG00000000169) #23	ENSOMYG00000065080	ENSOMYG00000026354 #24	ENSOMYG00000064903 #21	ENSOMYG00000000394 #20	ENSOMYG00000000406	gsk3ab (ENSOMYG00000000310) #22	znf574 (ENSOMYG00000000443)	ENSOMYG00000058775	ENSOMYG00000065091	ENSOMYG00000000710 #27	ENSOMYG00000068060	ENSOMYG00000000779	ENSOMYG00000000823 ##13	ENSOMYG00000068517	ENSOMYG00000058381 ##13	ENSOMYG00000000841 ##13	ENSOMYG00000000932	ENSOMYG00000000972 #19	ENSOMYG00000077764	tlr21 (ENSOMYG00000000991)	cxcr3.2 (ENSOMYG00000001013)
Oncorhynchus_a	ANCESTRAL SPECIES	93	ENSGT01050000245031.e	ENSGT00390000018821.f	ENSGT00940000164382.b.b.d	ENSGT00940000160453.a	ENSGT00950000183084.b.a.a.a.e.a	ENSGT00950000183126.b.a.u.a.b	ENSGT00940000165886.g	ENSGT00940000159480.d.a.a.a	ENSGT00940000159480.d.b	ENSGT00940000155088.b.a.b.i.b	ENSGT00940000166118.c	ENSGT00940000153675.a.a.a.a.b.l.b	ENSGT00390000005023.a.q.a	ENSGT00940000159960.d.d #20	ENSGT00940000162624.c	ENSGT00520000055635.c.b.b.j #22	ENSGT00940000166708.o.b	ENSGT00940000158852.c.a #27	ENSGT00940000165364.b.a	ENSGT01100000263956	ENSGT01100000263479.H.c.b.i.b ##13	ENSGT01100000263479.H.c.b.j.b.a ##13
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	22	ENSOTSG00005001209	ENSOTSG00005001215 #21	gsk3ab (ENSOTSG00005001227) #22	ENSOTSG00005001238	ENSOTSG00005001242	ENSOTSG00005001246	ENSOTSG00005001251	ENSOTSG00005001257	ENSOTSG00005001260	ENSOTSG00005001264	ENSOTSG00005001272	rbp5 (ENSOTSG00005001275)	ptpn6 (ENSOTSG00005001286)	ENSOTSG00005002094 #20	ZNF526 (ENSOTSG00005002106)	gsk3ab (ENSOTSG00005002111) #22	znf574 (ENSOTSG00005002123)	ENSOTSG00005002151 ##13	ENSOTSG00005002170 ##13	ENSOTSG00005002181 ##13	ENSOTSG00005002195 ##13	PAFAH1B3 (ENSOTSG00005002360) #19	ENSOTSG00005002369 ##13	tlr21 (ENSOTSG00005002373)	cxcr3.2 (ENSOTSG00005002379)	CXCR3 (ENSOTSG00005002383)	CXCR3 (ENSOTSG00005002388)	ENSOTSG00005002396	ENSOTSG00005025661	MEGF8 (ENSOTSG00005025743) #17	ENSOTSG00005025750
Chinook salmon	MODERN SPECIES	22	phc1 (ENSOTSG00005001102)	styk1b (ENSOTSG00005001115)	GSTK1 (ENSOTSG00005001125)	ENSOTSG00005001157	casp2 (ENSOTSG00005001163)	ENSOTSG00005001174	emg1 (ENSOTSG00005001185)	ENSOTSG00005001187	ENSOTSG00005001189	ENSOTSG00005001192	dedd1 (ENSOTSG00005001198) #23	dedd1 (ENSOTSG00005001201) #23	ENSOTSG00005001204	ENSOTSG00005001209	ENSOTSG00005001215 #21	gsk3ab (ENSOTSG00005001227) #22	ENSOTSG00005001238	ENSOTSG00005001242	ENSOTSG00005001246	ENSOTSG00005001251	ENSOTSG00005001257	ENSOTSG00005001260	ENSOTSG00005001264	ENSOTSG00005001272	rbp5 (ENSOTSG00005001275)	ptpn6 (ENSOTSG00005001286)	ENSOTSG00005002094 #20	ZNF526 (ENSOTSG00005002106)	gsk3ab (ENSOTSG00005002111) #22	znf574 (ENSOTSG00005002123)	ENSOTSG00005002151 ##13
Huchen	DUPLICATION
Huchen	MODERN SPECIES	2792													ENSHHUG00000007028 #20	ENSHHUG00000007030 #20	ENSHHUG00000007058	gsk3ab (ENSHHUG00000007063) #22	znf574 (ENSHHUG00000007066)
Huchen	MODERN SPECIES	2791													ENSHHUG00000006960 #20	ENSHHUG00000006962 #20	ENSHHUG00000006982	GSK3A (ENSHHUG00000006993) #22	znf574 (ENSHHUG00000007008)	ENSHHUG00000007017
Gnathostomata	ANCESTRAL SPECIES	126														ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000167392	ENSGT00940000158367	ENSGT00940000155177	ENSGT00940000162718	ENSGT00940000154334	ENSGT00940000157498	ENSGT00940000156336	ENSGT00940000153859.a	ENSGT00940000154359	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693
Elephant shark	MODERN SPECIES	1527	ENSCMIG00000000283	CREG1 (ENSCMIG00000000294)	ENSCMIG00000000298	ENSCMIG00000000304	ENSCMIG00000000311	ENSCMIG00000000319	ENSCMIG00000000336	dusp27 (ENSCMIG00000000354)	ENSCMIG00000000358	pou2f1b (ENSCMIG00000000405)	ENSCMIG00000000510	ENSCMIG00000000518	PLA1A (ENSCMIG00000000547)	lrrc58a (ENSCMIG00000000584)	ENSCMIG00000000592	gsk3bb (ENSCMIG00000000709) ##22	nr1i2 (ENSCMIG00000001141)	CFAP91 (ENSCMIG00000001213)	ENSCMIG00000001228	ENSCMIG00000001240	ENSCMIG00000001245	ENSCMIG00000001252	ENSCMIG00000001261	IGSF3 (ENSCMIG00000001267)	TTF2 (ENSCMIG00000001274)	ENSCMIG00000001282	TRIM45 (ENSCMIG00000001286)	ENSCMIG00000001297	ENSCMIG00000001304	ENSCMIG00000001310	man1a2 (ENSCMIG00000001459)
Euteleostomi	ANCESTRAL SPECIES	95													ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000155444	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693	ENSGT00940000153859.a	ENSGT00940000156336	ENSGT00940000158856	ENSGT00940000157498	ENSGT00940000157300
Actinopterygii	ANCESTRAL SPECIES	78												ENSGT00940000164822	ENSGT00940000157784.c	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000155444	ENSGT00940000166829	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693	ENSGT00940000165068	ENSGT00940000153859.a	ENSGT00940000156336	ENSGT00940000158856
Reedfish	MODERN SPECIES	12	ENSECRG00000006099	pdzk1 (ENSECRG00000005912)	GPR89B (ENSECRG00000005868)	ENSECRG00000005863	bcl9 (ENSECRG00000005853)	ENSECRG00000005849	acp6 (ENSECRG00000005837)	gja5b (ENSECRG00000005829)	gja8a (ENSECRG00000005820)	ENSECRG00000005801	ENSECRG00000005787	ENSECRG00000005778	fstl1a (ENSECRG00000005767)	LRRC58 (ENSECRG00000005763)	GPR156 (ENSECRG00000005748)	gsk3bb (ENSECRG00000005736) ##22	nr1i2 (ENSECRG00000005721)	CFAP91 (ENSECRG00000005681)	cox17 (ENSECRG00000005658)	popdc2 (ENSECRG00000005651)	pla1a (ENSECRG00000005639)	hsd3b2 (ENSECRG00000005633)	ENSECRG00000005622	hao2 (ENSECRG00000005615)	wars2 (ENSECRG00000005605)	tbx15 (ENSECRG00000005592)	ENSECRG00000005579	ENSECRG00000005570	wdr3 (ENSECRG00000005546)	gdap2 (ENSECRG00000005525)	tent5c (ENSECRG00000005517)
Neopterygii	ANCESTRAL SPECIES	379												ENSGT00940000164822	ENSGT00940000157784.c	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024
Spotted gar	MODERN SPECIES	655	setd4 (ENSLOCG00000006764)	cbr1 (ENSLOCG00000006781)	DOP1B (ENSLOCG00000006795)	MORC3 (ENSLOCG00000006832)	chaf1b (ENSLOCG00000006847)	ENSLOCG00000006876	bcl9 (ENSLOCG00000006913)	acp6 (ENSLOCG00000006932)	gja5b (ENSLOCG00000017789)	gja8a (ENSLOCG00000017790)	ENSLOCG00000006953	ENSLOCG00000006967	fstl1a (ENSLOCG00000006981)	lrrc58a (ENSLOCG00000007004)	GPR156 (ENSLOCG00000007020)	gsk3bb (ENSLOCG00000007035) ##22	ENSLOCG00000007075	ENSLOCG00000007088	ENSLOCG00000007121	ENSLOCG00000007157	ENSLOCG00000007186	mpx (ENSLOCG00000007217)	ENSLOCG00000007234	ENSLOCG00000007251	ARHGAP6 (ENSLOCG00000007265)	MID1 (ENSLOCG00000007293)	clcn4 (ENSLOCG00000007307)	wwc3 (ENSLOCG00000007321)	cldn33b (ENSLOCG00000017791)	CLDN34 (ENSLOCG00000017792)	SHROOM2 (ENSLOCG00000007347)
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Clupeocephala	ANCESTRAL SPECIES	23	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000015060	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00900000141090	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.C.f	ENSGT01050000244864.D	ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT00940000162718	ENSGT00940000157300	ENSGT00940000154334	ENSGT00940000157498
Euteleosteomorpha	ANCESTRAL SPECIES	471														ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Tiger tail seahorse	MODERN SPECIES	918																ENSHCOG00000018331 ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Carangaria	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Pleuronectoidei	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Tongue sole	MODERN SPECIES	9	ak2 (ENSCSEG00000007777)	rnf19b (ENSCSEG00000007762)	ndufs5 (ENSCSEG00000007757)	ENSCSEG00000007737	ENSCSEG00000007727	ENSCSEG00000007715	ENSCSEG00000020457	ENSCSEG00000020455	bmp8a (ENSCSEG00000020450)	zgc:91910 (ENSCSEG00000020446)	brd2a (ENSCSEG00000020443)	ENSCSEG00000020439	atp1a3a (ENSCSEG00000020433)	ENSCSEG00000020427 #24	erf (ENSCSEG00000020412) #21	ENSCSEG00000020334 ##22	ENSCSEG00000020317	col11a2 (ENSCSEG00000020238)	rxrba (ENSCSEG00000020139)	ENSCSEG00000020132	ENSCSEG00000020130	TCF19 (ENSCSEG00000020123)	pvrl2l (ENSCSEG00000020115)	slc39a7 (ENSCSEG00000019631)	ENSCSEG00000019621	si:dkey-211g8.1 (ENSCSEG00000019616)	ENSCSEG00000019606 ##13	ENSCSEG00000019602	ENSCSEG00000019599	sema6d (ENSCSEG00000019576)	ENSCSEG00000019573
Eupercaria	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Ballan wrasse	MODERN SPECIES	3143																ENSLBEG00000012285 ##22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Lyretail cichlid	MODERN SPECIES	24																ENSNBRG00000000087 ##22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Oryzias	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Oryzias_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000022370	gja8a (ENSORLG00000017928)	ENSORLG00000027779	ENSORLG00000027542	ENSORLG00000022041	ENSORLG00000027174	ENSORLG00000024585	ENSORLG00000023380	ENSORLG00000023439	ENSORLG00000024181	ENSORLG00000023858	ENSORLG00000026854	fstl1b (ENSORLG00000017943)	LRRC58 (ENSORLG00000017945)	GPR156 (ENSORLG00000023966)	GSK3B (ENSORLG00000017950) ##22	CFAP91 (ENSORLG00000017955)	ENSORLG00000023571	zgc:113337 (ENSORLG00000017956)	GPR89B (ENSORLG00000017960)	pdzk1 (ENSORLG00000017962)	ENSORLG00000017966	NALF1 (ENSORLG00000030050)	abhd13 (ENSORLG00000017968)	tnfsf13b (ENSORLG00000017970)	ENSORLG00000017978	ENSORLG00000026333	IRS2 (ENSORLG00000017981)	col4a1 (ENSORLG00000018010)	ENSORLG00000023066	ENSORLG00000018034
Protacanthopterygii	ANCESTRAL SPECIES	109	ENSGT00940000164480.a.a	ENSGT00390000012496.a.d	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00510000046499.r.b	ENSGT00390000016421.b.a	ENSGT00940000166160.ab	ENSGT00550000074968	ENSGT00900000141090.t	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164822.db	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114
Salmoninae	ANCESTRAL SPECIES	146	ENSGT00510000046499.r.b	ENSGT00390000016421.b.a.f	ENSGT00940000166160.`b	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00900000141090.t.sb.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00520000055635.c.a.a.a ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00390000000684.x	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000178299
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Salmo	ANCESTRAL SPECIES	48	ENSGT00940000159160.g	ENSGT00390000001170.a.b.b	ENSGT00940000153470.a.a.a.a.c.b.b	ENSGT00940000159094.e.d	ENSGT00950000182836.b.b.b.a.l.a	ENSGT00390000003874.a.b.b	ENSGT00940000159505.v.b	ENSGT00940000157065.y.a.b	ENSGT00390000013113.v	ENSGT00730000110915.b.c.b	ENSGT01050000244864.C.f.b	ENSGT01050000244864.D.t.a	ENSGT00940000157784.c.d.e	ENSGT00940000157784.c.d.f.a	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.a ##22	ENSGT00390000010372.o.a.b	ENSGT00390000003873.n.b	ENSGT00390000010372.o.a.a	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.b	ENSGT00940000157521.a.b.a	ENSGT00940000167103.c	ENSGT00940000166136.d	ENSGT00390000012561.b.pb.b.d	ENSGT00940000160639.b.a.b.b.a.a	ENSGT00390000013151.a.a.a.c	ENSGT00940000161997.a.i	ENSGT00940000160532.g.g	ENSGT00940000154486.b.a.a.b.e.a.b.f
Atlantic salmon	MODERN SPECIES	7	cpb2 (ENSSSAG00000104799)	ENSSSAG00000086044	ENSSSAG00000007767	ENSSSAG00000007806	PLCC (ENSSSAG00000007841)	ENSSSAG00000007894	pknx1 (ENSSSAG00000009247)	ENSSSAG00000009270	ENSSSAG00000009516	cryzl1 (ENSSSAG00000042514)	bcl9 (ENSSSAG00000042658)	gja5b (ENSSSAG00000042741)	gja8b (ENSSSAG00000101148)	fstl1a (ENSSSAG00000042764)	lrrc58a (ENSSSAG00000042935)	GSK3B (ENSSSAG00000095698) ##22	ENSSSAG00000089311	ENSSSAG00000007805	ENSSSAG00000111645	ENSSSAG00000119084	ENSSSAG00000044402	ENSSSAG00000050763	ENSSSAG00000118719	ENSSSAG00000050936	ENSSSAG00000051656	ENSSSAG00000058438	ENSSSAG00000104403	bzw1a (ENSSSAG00000108291)	aox5 (ENSSSAG00000058981)	ENSSSAG00000087803	sh3bp4a (ENSSSAG00000069340)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00390000015060.kb.a.b	ENSGT00940000168097.a.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.d	ENSGT00940000164822.db.a.c	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.b	ENSGT00940000158114.g	ENSGT00940000157536.a.a.d	ENSGT00940000158920.e	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000168406.i
Rainbow trout	DUPLICATION
Rainbow trout	MODERN SPECIES	14	SLC5A3 (ENSOMYG00000018592)	atp5po (ENSOMYG00000018540)	ENSOMYG00000066976	ENSOMYG00000059586	chaf1b (ENSOMYG00000018441)	ENSOMYG00000018426	BCL9 (ENSOMYG00000018417)	acp6 (ENSOMYG00000018343)	gja5a (ENSOMYG00000018337)	gja8a (ENSOMYG00000018326)	ENSOMYG00000018307	fstl1b (ENSOMYG00000017433)	LRRC58 (ENSOMYG00000017372)	ENSOMYG00000060787	GPR156 (ENSOMYG00000017361)	GSK3B (ENSOMYG00000015722) ##22	CFAP91 (ENSOMYG00000015577)	ENSOMYG00000015553	ENSOMYG00000015535	ENSOMYG00000066982	pdzk1 (ENSOMYG00000015523)	ENSOMYG00000015505	NALF1 (ENSOMYG00000015493)	abhd13 (ENSOMYG00000015488)	tnfsf13b (ENSOMYG00000015478)	MYO16 (ENSOMYG00000015443)	IRS2 (ENSOMYG00000015432)	COL4A1 (ENSOMYG00000015388)	ENSOMYG00000049901	ENSOMYG00000015349	rab20 (ENSOMYG00000015336)
Rainbow trout	MODERN SPECIES	21	BCL9 (ENSOMYG00000014454)	ENSOMYG00000066437	ENSOMYG00000056441	acp6 (ENSOMYG00000014462)	gja5a (ENSOMYG00000049227)	gja8a (ENSOMYG00000014482)	ENSOMYG00000051119	ENSOMYG00000000688	ENSOMYG00000014512	ENSOMYG00000053615	ENSOMYG00000049653	ENSOMYG00000014551	fstl1b (ENSOMYG00000014558)	LRRC58 (ENSOMYG00000014581)	GPR156 (ENSOMYG00000014589)	GSK3B (ENSOMYG00000014612) ##22	NR1I2 (ENSOMYG00000014861)	ENSOMYG00000014867	ENSOMYG00000053721	ENSOMYG00000014873	ENSOMYG00000014881	ENSOMYG00000073627	ENSOMYG00000014898	pdzk1 (ENSOMYG00000014921)	ENSOMYG00000071088	abhd13 (ENSOMYG00000014950)	tnfsf13b (ENSOMYG00000014957)	MYO16 (ENSOMYG00000048824)	IRS2 (ENSOMYG00000014988)	ENSOMYG00000048752	COL4A1 (ENSOMYG00000052923)
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00390000015060.kb.a.b	ENSGT00940000168097.a.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.d	ENSGT00940000164822.db.a.c	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g.a	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.b	ENSGT00940000158114.g	ENSGT01010000228814	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000168406.i	ENSGT00940000161024.a.a
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	341										ENSOTSG00005034761	ENSOTSG00005034760	ENSOTSG00005034759	fstl1b (ENSOTSG00005034508)	LRRC58 (ENSOTSG00005034505)	GPR156 (ENSOTSG00005034504)	ENSOTSG00005034503 ##22
Chinook salmon	MODERN SPECIES	3	ENSOTSG00005030294	iqgap2 (ENSOTSG00005011628)	f2r (ENSOTSG00005011592)	ENSOTSG00005011591	ssbp2a (ENSOTSG00005011590)	ENSOTSG00005011589	SLC25A1 (ENSOTSG00005011588)	ENSOTSG00005011587	MYL11 (ENSOTSG00005011585)	PLAT (ENSOTSG00005011584)	ikbkb (ENSOTSG00005011560)	ENSOTSG00005011554	fstl1b (ENSOTSG00005011162)	LRRC58 (ENSOTSG00005011160)	GPR156 (ENSOTSG00005011159)	ENSOTSG00005011158 ##22	ENSOTSG00005011157	vdac3 (ENSOTSG00005011150)	enkd1 (ENSOTSG00005011148)	ENSOTSG00005011147	ENSOTSG00005011144	dynll1 (ENSOTSG00005011141)	rpl6 (ENSOTSG00005011140)	ACAA2 (ENSOTSG00005011131)	mrpl40 (ENSOTSG00005011128)	ufd1l (ENSOTSG00005010461)	cdc45 (ENSOTSG00005010438)	cldn5a (ENSOTSG00005010436)	ENSOTSG00005010435	septin5a (ENSOTSG00005009975)	gp1bb (ENSOTSG00005009971)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Clupeiformes	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
Atlantic herring	MODERN SPECIES	13	mzt1 (ENSCHAG00000023329)	bora (ENSCHAG00000023332)	zfand5b (ENSCHAG00000023347)	rgn (ENSCHAG00000023353)	zgc:112023 (ENSCHAG00000023357)	rgn (ENSCHAG00000023402)	RGN (ENSCHAG00000023412)	ENSCHAG00000023419	zgc:112023 (ENSCHAG00000023434)	sft2d2b (ENSCHAG00000023439)	ENSCHAG00000023456	bcl9 (ENSCHAG00000023468)	gja5b (ENSCHAG00000023474)	gja8a (ENSCHAG00000023477)	fstl1a (ENSCHAG00000023484)	gsk3bb (ENSCHAG00000023643) ##22	ENSCHAG00000024266	anos1a (ENSCHAG00000024279)	ENSCHAG00000024347	ENSCHAG00000024357	itga6b (ENSCHAG00000024402)	dlx2b (ENSCHAG00000000415)	ENSCHAG00000000442	metap1d (ENSCHAG00000000701)	slc25a12 (ENSCHAG00000001591)	DYNC1I2 (ENSCHAG00000008621)	tlk1b (ENSCHAG00000010418)	gorasp2 (ENSCHAG00000011982)	gad1b (ENSCHAG00000012094)	ENSCHAG00000012567	SP5 (ENSCHAG00000012576)
Otophysi	ANCESTRAL SPECIES	25	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a	ENSGT00940000166025.b	ENSGT00940000166377.e	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a	ENSGT00530000063534.b	ENSGT00940000156696.B	ENSGT00940000157732.f.a	ENSGT00390000000909	ENSGT00940000156556.h	ENSGT00940000157784.c.d	ENSGT01050000244864.D	ENSGT01050000244864.C.f.f	ENSGT00730000110915.b
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351.a	ENSGT00940000163896	ENSGT00940000155351.b	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a.f	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a.e ##22	ENSGT01020000231101	ENSGT00520000055635.c.a.a.a.f ##22	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a	ENSGT00530000063534.b	ENSGT00940000156696.B	ENSGT00940000157732.f.a	ENSGT00390000000909	ENSGT00940000156556.h	ENSGT00940000157784.c.d	ENSGT01050000244864.D	ENSGT01050000244864.C.f.f
Cyprininae	ANCESTRAL SPECIES	554		ENSGT00940000164073.a.h	ENSGT00390000009613.b.h	ENSGT00940000159025.b	ENSGT00940000166376.l	ENSGT00940000156633.d.a.b	ENSGT00940000165755.b.f.a.b.a	ENSGT00940000165755.b.f.a.a.b	ENSGT00940000165755.b.f.a.a.a	ENSGT01050000244827.D.b.b.b.b	ENSGT01030000234610.b.a.b.a.m.a	ENSGT00940000166025.a.a.b	ENSGT00390000012228	ENSGT00940000166377.f.a	ENSGT00940000153342.a.d	ENSGT00520000055635.c.a.a.a.e ##22	ENSGT01020000231101	ENSGT00940000164716.C.c.a	ENSGT00390000000483.a.b.d	ENSGT00940000180035.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	18	ENSCARG00000008223	ENSCARG00000008217	ENSCARG00000008374	ENSCARG00000011320	aimp1a (ENSCARG00000011334)	tbck (ENSCARG00000011370)	npnta (ENSCARG00000011500)	sgms2a (ENSCARG00000011618)	cyp2u1 (ENSCARG00000011624)	hadh (ENSCARG00000011632)	lef1 (ENSCARG00000011646)	zgc:175214 (ENSCARG00000011679)	pdcd11 (ENSCARG00000011697)	atp5md (ENSCARG00000011724)	taf5 (ENSCARG00000011750)	gsk3bb (ENSCARG00000011970) ##22	si:dkeyp-80c12.8 (ENSCARG00000012038)	ENSCARG00000012051	caly (ENSCARG00000012057)	ENSCARG00000012067	ENSCARG00000012157	smarca5 (ENSCARG00000013247)	patl1 (ENSCARG00000014980)	ENSCARG00000014992	ENSCARG00000014998	ENSCARG00000015006	ENSCARG00000015011	osbp (ENSCARG00000015030)	SLC44A1 (ENSCARG00000015107)	abca1a (ENSCARG00000015545)	tacr3l (ENSCARG00000016490)
Goldfish	MODERN SPECIES	18	ENSCARG00000004442	dkk2 (ENSCARG00000004459)	papss1 (ENSCARG00000004595)	papss1 (ENSCARG00000005781)	pkd2 (ENSCARG00000006655)	abcg2d (ENSCARG00000006837)	ppm1kb (ENSCARG00000007419)	ENSCARG00000007429	ENSCARG00000007481	ITPRIP (ENSCARG00000007486)	CALHM1 (ENSCARG00000007502)	zgc:175214 (ENSCARG00000007508)	pdcd11 (ENSCARG00000007532)	atp5md (ENSCARG00000007576)	taf5 (ENSCARG00000007611)	gsk3bb (ENSCARG00000008132) ##22	si:dkeyp-80c12.8 (ENSCARG00000008191)	ENSCARG00000008199	caly (ENSCARG00000008210)	ENSCARG00000008223	ENSCARG00000008217	ENSCARG00000008374	ENSCARG00000011320	aimp1a (ENSCARG00000011334)	tbck (ENSCARG00000011370)	npnta (ENSCARG00000011500)	sgms2a (ENSCARG00000011618)	cyp2u1 (ENSCARG00000011624)	hadh (ENSCARG00000011632)	lef1 (ENSCARG00000011646)	zgc:175214 (ENSCARG00000011679)
Cyprininae_a	ANCESTRAL SPECIES	528								ENSGT00940000165755.b.f.a.a.b	ENSGT00940000165755.b.f.a.a.a	ENSGT01050000244827.D.b.b.b.b	ENSGT01030000234610.b.a.b.a.m.a	ENSGT00940000166025.a.a.b	ENSGT00390000012228	ENSGT00940000166377.f.a	ENSGT00940000153342.a.d	ENSGT00520000055635.c.a.a.a.e ##22	ENSGT01020000231101	ENSGT00940000164716.C.c.a	ENSGT00390000000483.a.b.d	ENSGT00940000180035.b.b
Golden-line barbel	MODERN SPECIES	1303															ENSSGRG00000013360	gsk3bb (ENSSGRG00000013362) ##22	ENSSGRG00000013374	caly (ENSSGRG00000013376)	ENSSGRG00000013377
Common carp reference	MODERN SPECIES	27	npnta (ENSCCRG00000082342)	tbck (ENSCCRG00000033744)	aimp1a (ENSCCRG00000043575)	dkk2 (ENSCCRG00000043571)	papss1 (ENSCCRG00000025335)	pkd2 (ENSCCRG00000047369)	abcg2d (ENSCCRG00000021720)	ENSCCRG00000037777	ENSCCRG00000070355	ENSCCRG00000060180	CALHM1 (ENSCCRG00000021704)	zgc:175214 (ENSCCRG00000078817)	pdcd11 (ENSCCRG00000037943)	atp5md (ENSCCRG00000037950)	taf5 (ENSCCRG00000021916)	gsk3bb (ENSCCRG00000076785) ##22	si:dkeyp-80c12.8 (ENSCCRG00000038011)	ENSCCRG00000038009	caly (ENSCCRG00000037916)	ENSCCRG00000057068	ENSCCRG00000055106	ENSCCRG00000015660	ENSCCRG00000015602	cfap58 (ENSCCRG00000058974)	neurl1aa (ENSCCRG00000066918)	ENSCCRG00000071622	stn1 (ENSCCRG00000036591)	fstl1a (ENSCCRG00000036568)	gja8b (ENSCCRG00000059724)	gja5b (ENSCCRG00000036560)	bcl9 (ENSCCRG00000036555)
Zebrafish	MODERN SPECIES		lef1 (ENSDARG00000031894)	ENSDARG00000079501	tsga10 (ENSDARG00000052512)	slkb (ENSDARG00000012574)	col17a1a (ENSDARG00000069415)	herc56.2 (ENSDARG00000075389)	herc56.3 (ENSDARG00000074136)	herc56.4 (ENSDARG00000074052)	zp3c (ENSDARG00000092919)	ITPRIP (ENSDARG00000036479)	CALHM1 (ENSDARG00000005314)	zgc:175214 (ENSDARG00000022891)	pdcd11 (ENSDARG00000052480)	atp5md (ENSDARG00000096003)	taf5 (ENSDARG00000018325)	gsk3bb (ENSDARG00000052468) ##22	si:dkeyp-80c12.8 (ENSDARG00000094465)	msx1b (ENSDARG00000008886)	caly (ENSDARG00000036008)	ENSDARG00000096031	cxcl18b (ENSDARG00000075045)	ENSDARG00000096191	ENSDARG00000112034	ENSDARG00000103535	cfap58 (ENSDARG00000069435)	neurl1aa (ENSDARG00000069438)	SH3PXD2A (ENSDARG00000060148)	stn1 (ENSDARG00000007734)	lrrc58a (ENSDARG00000076773)	fstl1a (ENSDARG00000015559)	gja8b (ENSDARG00000015076)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351.a	ENSGT00940000163896	ENSGT00940000155351.b	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a.f	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a.e ##22	ENSGT01020000231101	ENSGT00520000055635.c.a.a.a.f ##22	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a	ENSGT00530000063534.b	ENSGT00940000156696.B	ENSGT00940000157732.f.a	ENSGT00390000000909	ENSGT00940000156556.h	ENSGT00940000157784.c.d	ENSGT01050000244864.D	ENSGT01050000244864.C.f.f	ENSGT00730000110915.b	ENSGT00510000046499.z.a
Cyprininae	ANCESTRAL SPECIES	38	ENSGT00940000158244.f	ENSGT00940000154950.y.a.a	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000175002	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.a	ENSGT01030000234610.b.a.b.a.m.b	ENSGT00940000166025.a.b	ENSGT00940000166377.f.b	ENSGT00940000153342.a.c	ENSGT00520000055635.c.a.a.a.f ##22	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b.c	ENSGT00940000180035.a	ENSGT01030000234563.b.a.b.a.a.c.a.b	ENSGT01030000234563.b.a.b.a.b.a.a	ENSGT00530000063534.b.a.b	ENSGT00940000156696.B.f	ENSGT00940000157732.f.a.a	ENSGT00390000000909.i	ENSGT00940000156556.h.a	ENSGT00940000157784.c.d.a	ENSGT01050000244864.D.e.a	ENSGT01050000244864.C.f.f.b	ENSGT00730000110915.b.e	ENSGT00940000166590.mb
Goldfish	MODERN SPECIES		tbck (ENSCARG00000000449)	aimp1a (ENSCARG00000000438)	ENSCARG00000000433	dkk2 (ENSCARG00000000424)	papss1 (ENSCARG00000000350)	pkd2 (ENSCARG00000000156)	ppm1kb (ENSCARG00000009159)	ENSCARG00000009154	ENSCARG00000009141	zp3c (ENSCARG00000009127)	ITPRIP (ENSCARG00000009118)	CALHM1 (ENSCARG00000009112)	zgc:175214 (ENSCARG00000009109)	atp5md (ENSCARG00000009104)	taf5 (ENSCARG00000009085)	ENSCARG00000008851 ##22	msx1b (ENSCARG00000008825)	caly (ENSCARG00000008820)	ENSCARG00000008811	ENSCARG00000008809	ENSCARG00000008564	ENSCARG00000003323	ENSCARG00000003123	ENSCARG00000003119	TRIP10 (ENSCARG00000003107)	VAV1 (ENSCARG00000002985)	pin1 (ENSCARG00000002949)	MFAP4 (ENSCARG00000002945)	MFAP4 (ENSCARG00000002923)	ENSCARG00000002894	ENSCARG00000002876
Cyprininae_a	ANCESTRAL SPECIES	66	ENSGT00940000158244.f	ENSGT00940000154950.y.a.a	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.a	ENSGT00940000166025.a.a.a	ENSGT01030000234610.b.a.b.a.m.b	ENSGT00940000166025.a.b	ENSGT00940000166377.f.b	ENSGT00940000153342.a.c	ENSGT00520000055635.c.a.a.a.f ##22	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b.c	ENSGT00940000180035.a	ENSGT01030000234563.b.a.b.a.a.c.a.b	ENSGT01030000234563.b.a.b.a.b.a.a	ENSGT00530000063534.b.a.b	ENSGT00940000156696.B.f	ENSGT00940000157732.f.a.a	ENSGT00390000000909.i	ENSGT00940000156556.h.a	ENSGT00940000157784.c.d.a	ENSGT01050000244864.D.e.a	ENSGT01050000244864.C.f.f.b	ENSGT00730000110915.b.e	ENSGT00940000166590.mb
Common carp reference	MODERN SPECIES	22	sgms2a (ENSCCRG00000008752)	gstcd (ENSCCRG00000058210)	npnta (ENSCCRG00000037685)	tbck (ENSCCRG00000067399)	aimp1a (ENSCCRG00000074903)	dkk2 (ENSCCRG00000056997)	papss1 (ENSCCRG00000043458)	abcg2d (ENSCCRG00000047785)	pkd2 (ENSCCRG00000043486)	ENSCCRG00000021702	ENSCCRG00000021709	ENSCCRG00000061509	zp3c (ENSCCRG00000021706)	ENSCCRG00000021700	ENSCCRG00000007522	ENSCCRG00000038023 ##22	msx1b (ENSCCRG00000075887)	caly (ENSCCRG00000045194)	ENSCCRG00000076281	ENSCCRG00000028769	ENSCCRG00000007996	cfap58 (ENSCCRG00000017435)	neurl1aa (ENSCCRG00000000321)	ENSCCRG00000063844	stn1 (ENSCCRG00000000299)	lrrc58a (ENSCCRG00000064487)	fstl1a (ENSCCRG00000024571)	gja8b (ENSCCRG00000073119)	gja5b (ENSCCRG00000074145)	bcl9 (ENSCCRG00000015070)	morc3b (ENSCCRG00000024161)
Golden-line barbel	MODERN SPECIES	50	tbck (ENSSGRG00000013788)	aimp1a (ENSSGRG00000013786)	ENSSGRG00000013785	dkk2 (ENSSGRG00000013784)	papss1 (ENSSGRG00000012522)	pkd2 (ENSSGRG00000012197)	abcg2d (ENSSGRG00000011534)	ppm1kb (ENSSGRG00000011519)	ENSSGRG00000011518	ITPRIP (ENSSGRG00000011516)	zp3c (ENSSGRG00000011514)	CALHM1 (ENSSGRG00000011512)	zgc:175214 (ENSSGRG00000011510)	atp5md (ENSSGRG00000011507)	taf5 (ENSSGRG00000011503)	ENSSGRG00000011500 ##22	msx1b (ENSSGRG00000011499)	caly (ENSSGRG00000011498)	ENSSGRG00000011496	ENSSGRG00000011494	ENSSGRG00000011493	ENSSGRG00000011395	ENSSGRG00000011370	ENSSGRG00000011066
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a	ENSGT00530000063534.b	ENSGT00940000156696.B	ENSGT00940000157732.f.a	ENSGT00390000000909	ENSGT00940000156556.h	ENSGT00940000157784.c.d	ENSGT01050000244864.D	ENSGT01050000244864.C.f.f	ENSGT00730000110915.b
Channel catfish	MODERN SPECIES	18	ENSIPUG00000014559	ENSIPUG00000014830	ENSIPUG00000014851	ENSIPUG00000014868	tsga10 (ENSIPUG00000014880)	slk (ENSIPUG00000014943)	zp3c (ENSIPUG00000014959)	zp3c (ENSIPUG00000014983)	zp3c (ENSIPUG00000015025)	ENSIPUG00000015043	CALHM1 (ENSIPUG00000015057)	zgc:175214 (ENSIPUG00000015061)	pdcd11 (ENSIPUG00000015102)	atp5md (ENSIPUG00000015187)	taf5 (ENSIPUG00000015214)	gsk3bb (ENSIPUG00000015272) ##22	msxb (ENSIPUG00000015344)	caly (ENSIPUG00000015354)	cxcl18b (ENSIPUG00000015368)	ENSIPUG00000015415	ENSIPUG00000015492	cfap58 (ENSIPUG00000015570)	neurl1 (ENSIPUG00000019896)	sh3pxd2a (ENSIPUG00000019909)	obfc1 (ENSIPUG00000019983)	lrrc58a (ENSIPUG00000020001)	fstl1a (ENSIPUG00000020011)	gja8b (ENSIPUG00000020046)	GJA5 (ENSIPUG00000020050)	bcl9 (ENSIPUG00000020056)	ENSIPUG00000020078
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a
Characoidei	ANCESTRAL SPECIES	19	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351	ENSGT01050000244827.D.b.b.a	ENSGT01030000234610.b.a.b.b	ENSGT01030000234610.b.a.b.a	ENSGT01030000234610.b.a.a	ENSGT00940000166025.a	ENSGT00390000012228	ENSGT00940000166377.f	ENSGT00940000153342.a	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00390000017909.a	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a	ENSGT01030000234563.b.a.b.a.b.a
Red-bellied piranha	MODERN SPECIES	163	ENSPNAG00000017570	ENSPNAG00000017562	ENSPNAG00000017483	ENSPNAG00000017459	tsga10 (ENSPNAG00000017442)	ENSPNAG00000017393	slkb (ENSPNAG00000017378)	ENSPNAG00000017318	zp3c (ENSPNAG00000017302)	ENSPNAG00000017277	CALHM1 (ENSPNAG00000017272)	zgc:175214 (ENSPNAG00000017259)	pdcd11 (ENSPNAG00000017225)	atp5md (ENSPNAG00000017204)	taf5 (ENSPNAG00000017187)	gsk3bb (ENSPNAG00000003466) ##22	msx1b (ENSPNAG00000017073)	caly (ENSPNAG00000017067)	ENSPNAG00000017052	ENSPNAG00000017041	ENSPNAG00000003458
Mexicana tetra	MODERN SPECIES	3	ENSAMXG00000033179	ENSAMXG00000029398	ENSAMXG00000005320	ENSAMXG00000005333	ENSAMXG00000043665	tsga10 (ENSAMXG00000005345)	slkb (ENSAMXG00000005356)	ENSAMXG00000031571	zp3c (ENSAMXG00000035354)	ENSAMXG00000037626	CALHM1 (ENSAMXG00000005451)	zgc:175214 (ENSAMXG00000034057)	pdcd11 (ENSAMXG00000005458)	atp5md (ENSAMXG00000005484)	taf5 (ENSAMXG00000036058)	gsk3bb (ENSAMXG00000005487) ##22	ENSAMXG00000037243	caly (ENSAMXG00000031735)	ENSAMXG00000026009	ENSAMXG00000037997	ENSAMXG00000042003	ENSAMXG00000012744	ENSAMXG00000012668	ENSAMXG00000037277	ENSAMXG00000033706	ENSAMXG00000040526	ENSAMXG00000040991	ENSAMXG00000039917	dmd (ENSAMXG00000000112)	ENSAMXG00000000117	ENSAMXG00000000123
Electric eel	MODERN SPECIES	257	psmb13a (ENSEEEG00000022573)	psmb8a (ENSEEEG00000022568)	ENSEEEG00000022567	daxx (ENSEEEG00000022564)	zbtb22b (ENSEEEG00000022562)	ENSEEEG00000022560	znf384a (ENSEEEG00000022558)	FLOT1 (ENSEEEG00000022521)	ENSEEEG00000022516	ENSEEEG00000022514	pvrl2l (ENSEEEG00000022513)	atp1a3a (ENSEEEG00000021148)	ENSEEEG00000021078	ENSEEEG00000021076 #24	erf (ENSEEEG00000021074) #21	ENSEEEG00000021041 ##22	ENSEEEG00000021040	GRIK5 (ENSEEEG00000021037) #27	ENSEEEG00000021036 ##13
Osteoglossiformes	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.a ##22
P. kingsleyae	MODERN SPECIES		DOP1B (ENSPKIG00000008513)	ENSPKIG00000008578	ENSPKIG00000008611	ENSPKIG00000008629	ENSPKIG00000008663	morc3a (ENSPKIG00000008698)	chaf1b (ENSPKIG00000008763)	ENSPKIG00000008821	acp6 (ENSPKIG00000008848)	gja8b (ENSPKIG00000008881)	ENSPKIG00000008924	ENSPKIG00000008950	ENSPKIG00000008961	ENSPKIG00000008981	LRRC58 (ENSPKIG00000008994)	GSK3B (ENSPKIG00000009029) ##22	nr1i2 (ENSPKIG00000009082)	CFAP91 (ENSPKIG00000009135)	ENSPKIG00000009156	ENSPKIG00000009175	zgc:113337 (ENSPKIG00000009218)	u2af1 (ENSPKIG00000009285)	CBS (ENSPKIG00000009339)	cryaa (ENSPKIG00000009453)	SIK1 (ENSPKIG00000009500)	HSF2BP (ENSPKIG00000009536)	ing1 (ENSPKIG00000009581)	ube2al (ENSPKIG00000009557)	ENSPKIG00000009593	CARS2 (ENSPKIG00000009618)	naxd (ENSPKIG00000009650)
Osteoglossocephalai	ANCESTRAL SPECIES	53	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00900000141090	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.C.f	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164706.b	ENSGT00990000204624	ENSGT00530000063970.e	ENSGT00530000063970.f	ENSGT00940000164706.a	ENSGT01030000235355	ENSGT00950000183152.B.c.a	ENSGT00510000047027.c	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000003874.a.a	ENSGT00950000182836.b.b.b.a
Osteoglossiformes	ANCESTRAL SPECIES	249	ENSGT00940000164246.C	ENSGT00940000164480.a.b	ENSGT00940000164480.b	ENSGT00390000012496.a.a	ENSGT00390000019377.b.c	ENSGT00940000161679.b	ENSGT00390000015060	ENSGT00940000157065.s	ENSGT00730000110915.b.k	ENSGT00940000158408.e	ENSGT01050000244864.C.e	ENSGT01050000244864.D.x	ENSGT00940000157784.c.a	ENSGT00940000156556.j	ENSGT00940000159755.a	ENSGT00520000055635.c.a.a.b ##22	ENSGT00530000063970.f	ENSGT00940000164706.a
P. kingsleyae	MODERN SPECIES	243	ENSPKIG00000011291	ENSPKIG00000011276	ENSPKIG00000011268	ENSPKIG00000011253	vangl1 (ENSPKIG00000011229)	casq2 (ENSPKIG00000011189)	SLC5A3 (ENSPKIG00000011174)	atp5po (ENSPKIG00000011154)	ITSN1 (ENSPKIG00000011093)	bcl9 (ENSPKIG00000011043)	acp6 (ENSPKIG00000011008)	GJA5 (ENSPKIG00000010992)	fstl1a (ENSPKIG00000010945)	LRRC58 (ENSPKIG00000010904)	GPR156 (ENSPKIG00000010864)	gsk3ba (ENSPKIG00000010801) ##22	ENSPKIG00000010751	ENSPKIG00000010722	ENSPKIG00000010706	ENSPKIG00000010677	ENSPKIG00000010645	ENSPKIG00000010597	ENSPKIG00000010563	zgc:172122 (ENSPKIG00000010543)
Asian bonytongue	MODERN SPECIES	5	ENSSFOG00015026468	vangl1 (ENSSFOG00015011907)	casq2 (ENSSFOG00015011933)	SLC5A3 (ENSSFOG00015011968)	atp5po (ENSSFOG00015011974)	ITSN1 (ENSSFOG00015012013)	ENSSFOG00015012114	bcl9 (ENSSFOG00015012144)	acp6 (ENSSFOG00015012200)	gja5a (ENSSFOG00015012212)	ENSSFOG00015012226	GJA8 (ENSSFOG00015012243)	FSTL1 (ENSSFOG00015029425)	LRRC58 (ENSSFOG00015012285)	GPR156 (ENSSFOG00015031034)	gsk3ba (ENSSFOG00015025489) ##22	ENSSFOG00015012379	zgc:172122 (ENSSFOG00015031186)	U2AF1 (ENSSFOG00015012433)	cbsb (ENSSFOG00015012452)	cryaa (ENSSFOG00015012497)	sik1 (ENSSFOG00015012513)	ankrd10a (ENSSFOG00015012572)	IRS2 (ENSSFOG00015012725)	MYO16 (ENSSFOG00015012739)	tnfsf13b (ENSSFOG00015012797)	abhd13 (ENSSFOG00015012831)	lig4 (ENSSFOG00015012835)	NALF1 (ENSSFOG00015012851)	CCKBR (ENSSFOG00015011493)	ENSSFOG00015011466
Clupeocephala	ANCESTRAL SPECIES	23	ENSGT00550000074968	ENSGT00900000141090	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.C.f	ENSGT01050000244864.D	ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT00940000162718	ENSGT00940000157300	ENSGT00940000154334	ENSGT00940000157498	ENSGT00940000158856	ENSGT00940000156336	ENSGT00940000153859.a	ENSGT00940000159013	ENSGT00940000153724.A
Otomorpha	ANCESTRAL SPECIES	52											ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00940000158367.f	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT00940000165376	ENSGT00940000160555	ENSGT00940000157300	ENSGT00940000154334	ENSGT00940000157498	ENSGT00940000158856	ENSGT00940000156336	ENSGT00940000153859.a
Clupeiformes	ANCESTRAL SPECIES	1											ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00940000158367.f	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT00940000165376	ENSGT00940000160555	ENSGT00940000157300	ENSGT00940000154334	ENSGT00940000157498	ENSGT00940000158856	ENSGT00940000156336
Atlantic herring	MODERN SPECIES	11	vangl1 (ENSCHAG00000023988)	casq2 (ENSCHAG00000024013)	KCNE2 (ENSCHAG00000024059)	atp5po (ENSCHAG00000024141)	ENSCHAG00000024149	ENSCHAG00000024152	ENSCHAG00000024153	ENSCHAG00000024158	ENSCHAG00000024163	ENSCHAG00000024168	ENSCHAG00000024172	fstl1b (ENSCHAG00000024177)	ENSCHAG00000024330	LRRC58 (ENSCHAG00000024333)	GPR156 (ENSCHAG00000024335)	gsk3ba (ENSCHAG00000024359) ##22	nr1i2 (ENSCHAG00000024533)	CFAP91 (ENSCHAG00000024538)	ENSCHAG00000024545	zgc:113337 (ENSCHAG00000024555)	ENSCHAG00000024559	ENSCHAG00000024573	igsf3l (ENSCHAG00000024622)	igsf3 (ENSCHAG00000024643)	ENSCHAG00000024670	ENSCHAG00000024674	TTF2 (ENSCHAG00000024680)	ENSCHAG00000024742	ENSCHAG00000024749	ENSCHAG00000024752	ENSCHAG00000024758
Otophysi	ANCESTRAL SPECIES	102		ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000003874.a.a	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00990000205148	ENSGT00510000047027.c.b	ENSGT00940000155075.a.a.a	ENSGT00940000156564.a	ENSGT00530000063599.B.h	ENSGT00390000002174.b	ENSGT00390000006330.a.a.a	ENSGT00390000010463.a.b.d	ENSGT01050000244905.A.b	ENSGT01050000244905.D	ENSGT00390000006303
Cyprinoidei	ANCESTRAL SPECIES	187												ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00990000205148	ENSGT00940000164822.b	ENSGT00510000047027.c.b	ENSGT00940000155401.u	ENSGT00940000155075.a.a.a	ENSGT00940000156564.a
Zebrafish	MODERN SPECIES	24	ENSDARG00000109373	dars1 (ENSDARG00000070043)	cxcr4b (ENSDARG00000041959)	ENSDARG00000112156	THSD7B (ENSDARG00000095022)	hnmt (ENSDARG00000012796)	spopla (ENSDARG00000010563)	NXPH2 (ENSDARG00000063224)	ugt1a2 (ENSDARG00000006220)	prmt2 (ENSDARG00000063212)	ENSDARG00000104105	ENSDARG00000092421	fstl1b (ENSDARG00000039576)	LRRC58 (ENSDARG00000063509)	GPR156 (ENSDARG00000086215)	gsk3ba (ENSDARG00000017803) ##22	nr1i2 (ENSDARG00000029766)	CFAP91 (ENSDARG00000006292)	ENSDARG00000091411	zgc:113337 (ENSDARG00000041998)	ENSDARG00000092106	ENSDARG00000087403	u2af1 (ENSDARG00000015325)	cbsb (ENSDARG00000010946)	sik1 (ENSDARG00000058606)	ing1 (ENSDARG00000019116)	ube2al (ENSDARG00000003017)	ankrd10b (ENSDARG00000004771)	naxd (ENSDARG00000077119)	rab20 (ENSDARG00000005049)	COL4A2 (ENSDARG00000104110)
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	728													ENSGT00940000157784.c.c.b	ENSGT00940000156556.g.d	ENSGT00940000159755.d	ENSGT00520000055635.c.a.a.b.a.a ##22	ENSGT00940000161118.a	ENSGT00390000003024.e	ENSGT00940000164706.b.b	ENSGT00990000205148.b	ENSGT00940000164822.b.a	ENSGT00950000183152.B.c.a.e.a	ENSGT00510000047027.c.b.d
Cyprininae_a	ANCESTRAL SPECIES	126	ENSGT00390000008902.kb.l.b.a	ENSGT00390000012196.r.b	ENSGT00940000159505.a.a	ENSGT00940000158589.b.a	ENSGT00940000159245.a.b	ENSGT00940000155587.a.b.j.a	ENSGT00390000008902.kb.k	ENSGT00390000012196.r.a	ENSGT00940000159505.a.b	ENSGT00940000158449.ub	ENSGT00390000003874.a.a	ENSGT00940000164822.a.a.a.a	ENSGT00940000157784.c.c.b	ENSGT00940000156556.g.d	ENSGT00940000159755.d	ENSGT00520000055635.c.a.a.b.a.a ##22	ENSGT00940000161118.a	ENSGT00390000003024.e	ENSGT00940000164706.b.b	ENSGT00990000205148.b	ENSGT00940000164822.b.a	ENSGT00950000183152.B.c.a.e.a	ENSGT00510000047027.c.b.d	ENSGT00940000154989.k.a.a	ENSGT00940000155401.u.a.b	ENSGT00940000155075.a.a.a.b	ENSGT00940000156564.a.a	ENSGT00390000000917.o	ENSGT00940000161024.c.c	ENSGT00940000157234.kb.a	ENSGT00940000157678.c.a
Golden-line barbel	MODERN SPECIES	686													fstl1b (ENSSGRG00000044639)	LRRC58 (ENSSGRG00000044641)	GPR156 (ENSSGRG00000044643)	gsk3ba (ENSSGRG00000044709) ##22	ENSSGRG00000046278	CFAP91 (ENSSGRG00000046284)	zgc:113337 (ENSSGRG00000046292)	ENSSGRG00000046293	u2af1 (ENSSGRG00000046295)	sik1 (ENSSGRG00000046304)	ing1 (ENSSGRG00000046350)	ENSSGRG00000046351	ankrd10b (ENSSGRG00000046354)	naxd (ENSSGRG00000046358)	rab20 (ENSSGRG00000046386)	COL4A2 (ENSSGRG00000046388)	COL4A1 (ENSSGRG00000046390)	IRS2 (ENSSGRG00000046392)
Common carp reference	MODERN SPECIES	41	zgc:152951 (ENSCCRG00000039883)	slc37a1 (ENSCCRG00000039910)	ENSCCRG00000036714	ENSCCRG00000067867	ENSCCRG00000057455	pknox1.1 (ENSCCRG00000062286)	ENSCCRG00000025428	pdxka (ENSCCRG00000052496)	ENSCCRG00000059868	ENSCCRG00000024936	ENSCCRG00000054992	ENSCCRG00000065648	fstl1b (ENSCCRG00000012961)	LRRC58 (ENSCCRG00000065277)	GPR156 (ENSCCRG00000013961)	gsk3ba (ENSCCRG00000019917) ##22	nr1i2 (ENSCCRG00000051427)	CFAP91 (ENSCCRG00000051428)	ENSCCRG00000070100	ENSCCRG00000060035	u2af1 (ENSCCRG00000005054)	cbsb (ENSCCRG00000005058)	sik1 (ENSCCRG00000005069)	ing1 (ENSCCRG00000062335)	ube2al (ENSCCRG00000058666)	ankrd10b (ENSCCRG00000005667)	naxd (ENSCCRG00000037626)	rab20 (ENSCCRG00000072642)	COL4A2 (ENSCCRG00000037674)	COL4A1 (ENSCCRG00000014223)	IRS2 (ENSCCRG00000015090)
Goldfish	MODERN SPECIES	27	parp14rs1 (ENSCARG00000012215)	ENSCARG00000012187	faima (ENSCARG00000012176)	ndufa10 (ENSCARG00000012150)	gypc (ENSCARG00000012142)	ENSCARG00000012139	ENSCARG00000012116	ENSCARG00000012111	ENSCARG00000012104	ENSCARG00000011814	ENSCARG00000011779	ENSCARG00000011775	fstl1b (ENSCARG00000011664)	LRRC58 (ENSCARG00000011652)	GPR156 (ENSCARG00000011649)	gsk3ba (ENSCARG00000009054) ##22	nr1i2 (ENSCARG00000008907)	upp2 (ENSCARG00000008873)	ENSCARG00000008869	ENSCARG00000008867	ENSCARG00000008864	PKP4 (ENSCARG00000007530)	ENSCARG00000007438	ENSCARG00000007436	crfb1 (ENSCARG00000007393)	ackr3a (ENSCARG00000007374)	ENSCARG00000007366	ENSCARG00000007298	tyw5 (ENSCARG00000007272)	maip1 (ENSCARG00000007267)	ENSCARG00000007206
Cyprininae	ANCESTRAL SPECIES	674												ENSGT00940000164822.a.a.b	ENSGT00940000157784.c.c.a	ENSGT00940000156556.g.c	ENSGT00940000159755.c	ENSGT00520000055635.c.a.a.b.a.b ##22	ENSGT00940000161118.b	ENSGT00390000003024.f	ENSGT00990000204624	ENSGT00940000164706.b.a	ENSGT00990000205148.a	ENSGT00940000164822.b.b	ENSGT00950000183152.B.c.a.e.b	ENSGT00510000047027.c.b.c
Goldfish	MODERN SPECIES	49	slc37a1 (ENSCARG00000019288)	PDE9A (ENSCARG00000019083)	wdr4 (ENSCARG00000019056)	si:ch211-140m22.7 (ENSCARG00000019045)	ENSCARG00000019042	pknox1.1 (ENSCARG00000018864)	TMPRSS3 (ENSCARG00000018845)	ENSCARG00000018841	ENSCARG00000018833	fstl1b (ENSCARG00000018319)	LRRC58 (ENSCARG00000018307)	ENSCARG00000018295	GPR156 (ENSCARG00000018292)	ENSCARG00000018287	ENSCARG00000018284	gsk3ba (ENSCARG00000016594) ##22	nr1i2 (ENSCARG00000016459)	CFAP91 (ENSCARG00000016332)	zgc:113337 (ENSCARG00000016310)	ENSCARG00000016305	ENSCARG00000016302	u2af1 (ENSCARG00000016283)	cbsb (ENSCARG00000013347)	ENSCARG00000013289	ENSCARG00000013286	ENSCARG00000013281	ENSCARG00000013280	ENSCARG00000013278	ENSCARG00000013274	ENSCARG00000013270	ENSCARG00000013266
Cyprininae_a	ANCESTRAL SPECIES	95													ENSGT00940000157784.c.c.a	ENSGT00940000156556.g.c	ENSGT00940000159755.c	ENSGT00520000055635.c.a.a.b.a.b ##22	ENSGT00940000161118.b	ENSGT00390000003024.f	ENSGT00990000204624	ENSGT00940000164706.b.a	ENSGT00990000205148.a	ENSGT00940000164822.b.b	ENSGT00950000183152.B.c.a.e.b	ENSGT00510000047027.c.b.c	ENSGT00940000154989.k.a.b	ENSGT00940000155401.u.a.a	ENSGT00940000155075.a.a.a.a	ENSGT00940000156564.a.b	ENSGT00390000000917.p	ENSGT00940000161024.c.d	ENSGT00940000157234.kb.b
Common carp reference	MODERN SPECIES	46	chmp2ba (ENSCCRG00000065793)	pou1f1 (ENSCCRG00000035812)	ENSCCRG00000068041	zgc:152951 (ENSCCRG00000070710)	slc37a1 (ENSCCRG00000029961)	PDE9A (ENSCCRG00000081104)	wdr4 (ENSCCRG00000013352)	ENSCCRG00000066442	pknox1.1 (ENSCCRG00000012518)	ENSCCRG00000064264	ENSCCRG00000076756	ENSCCRG00000066355	fstl1b (ENSCCRG00000012980)	LRRC58 (ENSCCRG00000012946)	GPR156 (ENSCCRG00000072911)	gsk3ba (ENSCCRG00000013021) ##22	nr1i2 (ENSCCRG00000019902)	CFAP91 (ENSCCRG00000014006)	ENSCCRG00000079885	zgc:113337 (ENSCCRG00000014013)	ENSCCRG00000014016	ENSCCRG00000055299	ENSCCRG00000066181	u2af1 (ENSCCRG00000025253)	cbsb (ENSCCRG00000080289)	sik1 (ENSCCRG00000005679)	ube2al (ENSCCRG00000073517)	ing1 (ENSCCRG00000072804)	naxd (ENSCCRG00000075881)	rab20 (ENSCCRG00000082639)	COL4A2 (ENSCCRG00000037694)
Golden-line barbel	MODERN SPECIES	438	pou1f1 (ENSSGRG00000055288)	HTR1F (ENSSGRG00000055289)	zgc:152951 (ENSSGRG00000055290)	slc37a1 (ENSSGRG00000055291)	PDE9A (ENSSGRG00000055292)	wdr4 (ENSSGRG00000055293)	si:ch211-140m22.7 (ENSSGRG00000055294)	ENSSGRG00000055295	pknox1.1 (ENSSGRG00000055296)	TMPRSS3 (ENSSGRG00000055297)	pdxka (ENSSGRG00000055298)	ENSSGRG00000055299	fstl1b (ENSSGRG00000055300)	LRRC58 (ENSSGRG00000055302)	GPR156 (ENSSGRG00000055303)	gsk3ba (ENSSGRG00000055304) ##22	nr1i2 (ENSSGRG00000055324)	ENSSGRG00000055327	CFAP91 (ENSSGRG00000055329)	zgc:113337 (ENSSGRG00000055333)	ENSSGRG00000055334
Cyprininae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.b.b ##22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.b.b ##22
Golden-line barbel	MODERN SPECIES	4097																ENSSGRG00000005971 ##22
Characiphysae	ANCESTRAL SPECIES	53	ENSGT00940000155773.b	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000003874.a.a	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164706.b	ENSGT00990000205148	ENSGT00510000047027.c.b	ENSGT00940000154989	ENSGT00940000155401.u	ENSGT01060000249379	ENSGT00940000155075.a.a.a	ENSGT00940000156564.a	ENSGT00530000063599.B.h	ENSGT00390000002174.b	ENSGT00390000006330.a.a.a	ENSGT00390000010463.a.b.d	ENSGT01050000244905.A.b.c
Channel catfish	MODERN SPECIES	25	myo16 (ENSIPUG00000000334)	TNFSF13B (ENSIPUG00000000324)	abhd13 (ENSIPUG00000000323)	FAM155A (ENSIPUG00000000321)	cckar (ENSIPUG00000000319)	pdzk1 (ENSIPUG00000000318)	GPR89B (ENSIPUG00000000312)	st6gal2 (ENSIPUG00000000306)	tmtops2b (ENSIPUG00000000304)	uxs1 (ENSIPUG00000023908)	ENSIPUG00000023897	ENSIPUG00000023894	fstl1 (ENSIPUG00000023883)	lrrc58 (ENSIPUG00000023880)	gpr156 (ENSIPUG00000023877)	gsk3b (ENSIPUG00000023868) ##22	nr1i2 (ENSIPUG00000023864)	maats1 (ENSIPUG00000023857)	Btla (ENSIPUG00000023856)	ENSIPUG00000023853	ggact (ENSIPUG00000023851)	SYTL5 (ENSIPUG00000023845)	asb11 (ENSIPUG00000023841)	ENSIPUG00000023836	PIGA (ENSIPUG00000023831)	ENSIPUG00000023829	TASL (ENSIPUG00000023828)	rnaseh2b (ENSIPUG00000023815)	trim13 (ENSIPUG00000023812)	spryd7b (ENSIPUG00000023810)	gtpbp8 (ENSIPUG00000023808)
Characiphysae_b	ANCESTRAL SPECIES	88	ENSGT00940000155773.b	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000003874.a.a	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164706.b	ENSGT00990000205148	ENSGT00510000047027.c.b	ENSGT00940000154989	ENSGT00940000155401.u	ENSGT01060000249379	ENSGT00940000155075.a.a.a	ENSGT00940000156564.a	ENSGT00530000063599.B.h	ENSGT00390000002174.b	ENSGT00390000006330.a.a.a	ENSGT00390000010463.a.b.d	ENSGT01050000244905.A.b.c
Characoidei	ANCESTRAL SPECIES	43	ENSGT00940000155773.b	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000008902.kb	ENSGT00390000012196	ENSGT00940000159505	ENSGT00940000158589.b.a	ENSGT00940000173884	ENSGT00390000003874.a.a	ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g.a	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164706.b	ENSGT00990000205148	ENSGT00510000047027.c.b	ENSGT00940000154989	ENSGT00940000155401.u	ENSGT01060000249379	ENSGT00940000155075.a.a.a	ENSGT00940000156564.a	ENSGT00530000063599.B.h	ENSGT00390000002174.b	ENSGT00390000006330.a.a.a	ENSGT00390000010463.a.b.d	ENSGT01050000244905.A.b.c
Red-bellied piranha	MODERN SPECIES	216															GPR156 (ENSPNAG00000021434)	gsk3ba (ENSPNAG00000021421) ##22	nr1i2 (ENSPNAG00000021357)	CFAP91 (ENSPNAG00000021340)	zgc:113337 (ENSPNAG00000021327)	ENSPNAG00000021305	ENSPNAG00000021284	u2af1 (ENSPNAG00000021267)	cbsb (ENSPNAG00000021234)	ENSPNAG00000021183	sik1 (ENSPNAG00000021159)	ing1 (ENSPNAG00000003668)	ENSPNAG00000021083	ube2al (ENSPNAG00000021067)	ankrd10b (ENSPNAG00000021028)	mfsd6b (ENSPNAG00000021013)	nemp2 (ENSPNAG00000020996)
Mexicana tetra	MODERN SPECIES	10	slc37a1 (ENSAMXG00000035502)	PDE9A (ENSAMXG00000008265)	wdr4 (ENSAMXG00000008345)	si:ch211-140m22.7 (ENSAMXG00000030141)	ENSAMXG00000037187	pknox1.1 (ENSAMXG00000032866)	TMPRSS3 (ENSAMXG00000008759)	ENSAMXG00000008772	pdxka (ENSAMXG00000035376)	ENSAMXG00000036479	ENSAMXG00000038986	ENSAMXG00000043277	fstl1b (ENSAMXG00000012534)	LRRC58 (ENSAMXG00000030089)	GPR156 (ENSAMXG00000040468)	gsk3ba (ENSAMXG00000008836) ##22	CFAP91 (ENSAMXG00000008880)	ENSAMXG00000040499	zgc:113337 (ENSAMXG00000040176)	ENSAMXG00000042478	ENSAMXG00000031300	u2af1 (ENSAMXG00000034836)	cbsb (ENSAMXG00000018461)	sik1 (ENSAMXG00000018482)	ENSAMXG00000042460	ing1 (ENSAMXG00000018491)	ube2al (ENSAMXG00000033633)	ankrd10b (ENSAMXG00000018519)	mfsd6b (ENSAMXG00000018531)	nemp2 (ENSAMXG00000018537)	nab1b (ENSAMXG00000018542)
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	90	jam2a (ENSEEEG00000020378)	mrpl39 (ENSEEEG00000020379)	ENSEEEG00000020383	ENSEEEG00000020387	ENSEEEG00000020389	tsga10 (ENSEEEG00000020391)	slkb (ENSEEEG00000020410)	ENSEEEG00000020491	zp3c (ENSEEEG00000020493)	ITPRIP (ENSEEEG00000020494)	CALHM1 (ENSEEEG00000020495)	zgc:175214 (ENSEEEG00000020496)	pdcd11 (ENSEEEG00000020497)	atp5md (ENSEEEG00000020503)	taf5 (ENSEEEG00000020507)	ENSEEEG00000020509 ##22
Electric eel	MODERN SPECIES	176													fstl1b (ENSEEEG00000019448)	LRRC58 (ENSEEEG00000019447)	GPR156 (ENSEEEG00000019446)	gsk3ba (ENSEEEG00000019444) ##22	nr1i2 (ENSEEEG00000019417)	CFAP91 (ENSEEEG00000019408)	zgc:113337 (ENSEEEG00000019407)	ENSEEEG00000019406	ENSEEEG00000019405	ENSEEEG00000019404	ENSEEEG00000019395	actr3 (ENSEEEG00000019121)	SLC35F5 (ENSEEEG00000019095)	gpr39 (ENSEEEG00000019087)	bmpr2b (ENSEEEG00000019083)	fam117bb (ENSEEEG00000019078)	ENSEEEG00000019076	fzd7a (ENSEEEG00000019075)	ALS2 (ENSEEEG00000019074)
Euteleosteomorpha	ANCESTRAL SPECIES	6	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00900000141090.t	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.C.f	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00990000210921	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678
Cod	MODERN SPECIES	12	ENSGMOG00000030370	ENSGMOG00000029589	ENSGMOG00000001981	ENSGMOG00000011191	ENSGMOG00000027665	ENSGMOG00000032219	ENSGMOG00000005358	ENSGMOG00000035911	ENSGMOG00000032650	ENSGMOG00000019245	ENSGMOG00000019250	ENSGMOG00000008247	fstl1b (ENSGMOG00000007270)	LRRC58 (ENSGMOG00000007256)	GPR156 (ENSGMOG00000023254)	gsk3ba (ENSGMOG00000018893) ##22	CFAP91 (ENSGMOG00000018885)	ENSGMOG00000019707	ENSGMOG00000028822	ENSGMOG00000023968	RAB20 (ENSGMOG00000032262)	ENSGMOG00000003375	ING1 (ENSGMOG00000033720)	ENSGMOG00000029792	ENSGMOG00000003320	ENSGMOG00000003279	ENSGMOG00000034400	ENSGMOG00000003255	ENSGMOG00000003239	ENSGMOG00000003202	ENSGMOG00000003190
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Pinecone sodierfish	MODERN SPECIES	13	DOP1B (ENSMMDG00005002545)	ENSMMDG00005002564	ENSMMDG00005002600	chaf1b (ENSMMDG00005002685)	ENSMMDG00005002727	bcl9 (ENSMMDG00005002739)	acp6 (ENSMMDG00005002762)	gja5a (ENSMMDG00005002802)	gja8a (ENSMMDG00005002811)	ENSMMDG00005002822	ENSMMDG00005002832	fstl1b (ENSMMDG00005002870)	LRRC58 (ENSMMDG00005003093)	ENSMMDG00005003097	GPR156 (ENSMMDG00005003101)	gsk3ba (ENSMMDG00005003137) ##22	CFAP91 (ENSMMDG00005003499)	ENSMMDG00005003982	zgc:113337 (ENSMMDG00005003986)	GPR89B (ENSMMDG00005004016)	pdzk1 (ENSMMDG00005004035)	CCKBR (ENSMMDG00005004050)	NALF1 (ENSMMDG00005004052)	ENSMMDG00005004072	abhd13 (ENSMMDG00005004083)	tnfsf13b (ENSMMDG00005004093)	MYO16 (ENSMMDG00005004119)	IRS2 (ENSMMDG00005004135)	COL4A1 (ENSMMDG00005004154)	ENSMMDG00005004242	rab20 (ENSMMDG00005004319)
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000178299
Tiger tail seahorse	MODERN SPECIES	456	casq2 (ENSHCOG00000004580)	SLC5A3 (ENSHCOG00000004590)	ENSHCOG00000004602	DOP1B (ENSHCOG00000004648)	ENSHCOG00000004657	chaf1b (ENSHCOG00000004695)	ENSHCOG00000004702	bcl9 (ENSHCOG00000004712)	acp6 (ENSHCOG00000004720)	gja5a (ENSHCOG00000004729)	gja8a (ENSHCOG00000004740)	ENSHCOG00000004744	fstl1b (ENSHCOG00000000141)	LRRC58 (ENSHCOG00000005255)	ENSHCOG00000005283	gsk3ba (ENSHCOG00000000150) ##22	CFAP91 (ENSHCOG00000000160)	ENSHCOG00000005374	cycsb (ENSHCOG00000005386)	OSBPL6 (ENSHCOG00000005404)	prkra (ENSHCOG00000000168)	FAM237A (ENSHCOG00000005420)	ADAM23 (ENSHCOG00000005455)	CMKLR2 (ENSHCOG00000005462)	INO80D (ENSHCOG00000000853)	STK24 (ENSHCOG00000005480)	sdhaf3 (ENSHCOG00000005498)	SLC15A1 (ENSHCOG00000007794)	DOCK9 (ENSHCOG00000007992)	ENSHCOG00000008006	ENSHCOG00000008068
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Carangaria	ANCESTRAL SPECIES	12	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000161024	ENSGT00390000000917	ENSGT00940000155401
Turbot	MODERN SPECIES	5	casq2 (ENSSMAG00000017981)	ENSSMAG00000033370	ENSSMAG00000025292	ENSSMAG00000018178	ENSSMAG00000018185	chaf1b (ENSSMAG00000018196)	ENSSMAG00000018225	BCL9 (ENSSMAG00000018243)	acp6 (ENSSMAG00000018293)	GJA5 (ENSSMAG00000018298)	gja8a (ENSSMAG00000007614)	ENSSMAG00000018316	fstl1b (ENSSMAG00000018358)	LRRC58 (ENSSMAG00000018367)	GPR156 (ENSSMAG00000018385)	gsk3ba (ENSSMAG00000018406) ##22	ENSSMAG00000018434	ENSSMAG00000018447	ENSSMAG00000018464	ENSSMAG00000018493	pdzk1 (ENSSMAG00000018505)	ENSSMAG00000018535	NALF1 (ENSSMAG00000018538)	abhd13 (ENSSMAG00000018539)	tnfsf13b (ENSSMAG00000018540)	MYO16 (ENSSMAG00000018557)	IRS2 (ENSSMAG00000018724)	COL4A1 (ENSSMAG00000018732)	ENSSMAG00000018781	rab20 (ENSSMAG00000018818)	naxd (ENSSMAG00000018837)
Tongue sole	MODERN SPECIES	7	mettl5 (ENSCSEG00000011611)	ssb (ENSCSEG00000011599)	KLHL23 (ENSCSEG00000011594)	phgdh (ENSCSEG00000011584)	ENSCSEG00000011576	chaf1b (ENSCSEG00000011548)	ENSCSEG00000011536	bcl9 (ENSCSEG00000011519)	acp6 (ENSCSEG00000011491)	gja5a (ENSCSEG00000011487)	gja8a (ENSCSEG00000011482)	ENSCSEG00000011473	fstl1b (ENSCSEG00000011451)	LRRC58 (ENSCSEG00000011441)	GPR156 (ENSCSEG00000011432)	gsk3ba (ENSCSEG00000011412) ##22	ENSCSEG00000011400	zgc:113337 (ENSCSEG00000011389)	GPR89B (ENSCSEG00000011378)	pdzk1 (ENSCSEG00000011340)	CCKBR (ENSCSEG00000011297)	NALF1 (ENSCSEG00000011287)	abhd13 (ENSCSEG00000011269)	tnfsf13b (ENSCSEG00000011260)	ENSCSEG00000011236	IRS2 (ENSCSEG00000011229)	COL4A1 (ENSCSEG00000011179)	ENSCSEG00000011167	ENSCSEG00000011163	rab20 (ENSCSEG00000011160)	ENSCSEG00000011155
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000178262	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Greater amberjack	MODERN SPECIES	21	SLC5A3 (ENSSDUG00000004227)	DOP1B (ENSSDUG00000004238)	ENSSDUG00000004276	morc3a (ENSSDUG00000004285)	chaf1b (ENSSDUG00000004318)	ENSSDUG00000004330	bcl9 (ENSSDUG00000004346)	acp6 (ENSSDUG00000004360)	gja5a (ENSSDUG00000004370)	gja8a (ENSSDUG00000004379)	ENSSDUG00000004402	fstl1b (ENSSDUG00000004459)	LRRC58 (ENSSDUG00000004505)	ENSSDUG00000004546	GPR156 (ENSSDUG00000004554)	gsk3ba (ENSSDUG00000004567) ##22	nr1i2 (ENSSDUG00000004600)	CFAP91 (ENSSDUG00000004678)	ENSSDUG00000004707	ENSSDUG00000004715	zgc:113337 (ENSSDUG00000004733)	GPR89B (ENSSDUG00000004781)	pdzk1 (ENSSDUG00000004828)	CCKBR (ENSSDUG00000004846)	NALF1 (ENSSDUG00000004854)	abhd13 (ENSSDUG00000004857)	tnfsf13b (ENSSDUG00000004862)	MYO16 (ENSSDUG00000004880)	IRS2 (ENSSDUG00000004970)	COL4A1 (ENSSDUG00000004990)	ENSSDUG00000005093
Yellowtail amberjack	MODERN SPECIES	2951	KCNE2 (ENSSLDG00000020538)	SLC5A3 (ENSSLDG00000020531)	DOP1B (ENSSLDG00000020392)	ENSSLDG00000020365	ENSSLDG00000020349	chaf1b (ENSSLDG00000020316)	ENSSLDG00000020297	bcl9 (ENSSLDG00000020275)	acp6 (ENSSLDG00000020257)	gja5a (ENSSLDG00000020249)	gja8a (ENSSLDG00000020245)	ENSSLDG00000020230	ENSSLDG00000020218	fstl1b (ENSSLDG00000020188)	GPR156 (ENSSLDG00000020164)	gsk3ba (ENSSLDG00000020137) ##22	nr1i2 (ENSSLDG00000020072)	CFAP91 (ENSSLDG00000020005)	zgc:113337 (ENSSLDG00000019974)	GPR89B (ENSSLDG00000019904)	pdzk1 (ENSSLDG00000019882)	CCKBR (ENSSLDG00000019866)	NALF1 (ENSSLDG00000019858)	abhd13 (ENSSLDG00000019854)	tnfsf13b (ENSSLDG00000019843)	ENSSLDG00000019812	IRS2 (ENSSLDG00000019805)	COL4A1 (ENSSLDG00000019734)	ENSSLDG00000019677	rab20 (ENSSLDG00000019658)	naxd (ENSSLDG00000019613)
Barramundi perch	MODERN SPECIES	76	zgc:56095 (ENSLCAG00010027283)	ENSLCAG00010027282	ENSLCAG00010027281	pigp (ENSLCAG00010027280)	ENSLCAG00010027278	REXO4 (ENSLCAG00010027277)	kcnc3b (ENSLCAG00010027275)	ENSLCAG00010027271	fgf21 (ENSLCAG00010027269)	ENSLCAG00010027267	ENSLCAG00010027265	fstl1b (ENSLCAG00010027259)	LRRC58 (ENSLCAG00010027254)	ENSLCAG00010027253	GPR156 (ENSLCAG00010027251)	gsk3ba (ENSLCAG00010027248) ##22	nr1i2 (ENSLCAG00010027242)	CFAP91 (ENSLCAG00010027236)	ENSLCAG00010027232	zgc:113337 (ENSLCAG00010027231)	GPR89B (ENSLCAG00010027227)	pdzk1 (ENSLCAG00010027226)	CCKBR (ENSLCAG00010027223)
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Climbing perch	MODERN SPECIES	12	chaf1b (ENSATEG00000012270)	ENSATEG00000012256	BCL9 (ENSATEG00000012242)	acp6 (ENSATEG00000012231)	gja5a (ENSATEG00000012229)	gja8a (ENSATEG00000012211)	ENSATEG00000012141	ENSATEG00000012167	ENSATEG00000012100	ENSATEG00000012189	ENSATEG00000012117	fstl1b (ENSATEG00000012054)	LRRC58 (ENSATEG00000012036)	ENSATEG00000012013	GPR156 (ENSATEG00000012003)	gsk3ba (ENSATEG00000011968) ##22	nr1i2 (ENSATEG00000026530)	CFAP91 (ENSATEG00000011834)	ENSATEG00000011801	ENSATEG00000011791	ENSATEG00000011768	ENSATEG00000011678	pdzk1 (ENSATEG00000011724)	ENSATEG00000011552	FAM155A (ENSATEG00000026574)	abhd13 (ENSATEG00000011528)	tnfsf13b (ENSATEG00000011501)	MYO16 (ENSATEG00000011445)	IRS2 (ENSATEG00000011435)	COL4A1 (ENSATEG00000011285)	ENSATEG00000011256
Siamese fighting fish	MODERN SPECIES	11	ENSBSLG00000017309	chaf1b (ENSBSLG00000017230)	ENSBSLG00000017197	bcl9 (ENSBSLG00000017167)	acp6 (ENSBSLG00000017039)	gja5a (ENSBSLG00000017024)	gja8a (ENSBSLG00000016999)	ENSBSLG00000016948	ENSBSLG00000016915	ENSBSLG00000016883	ENSBSLG00000016862	ENSBSLG00000022930	fstl1b (ENSBSLG00000022861)	LRRC58 (ENSBSLG00000022827)	GPR156 (ENSBSLG00000022811)	gsk3ba (ENSBSLG00000022108) ##22	nr1i2 (ENSBSLG00000021993)	CFAP91 (ENSBSLG00000021902)	zgc:113337 (ENSBSLG00000021878)	GPR89B (ENSBSLG00000021842)	pdzk1 (ENSBSLG00000021831)	CCKBR (ENSBSLG00000021822)	NALF1 (ENSBSLG00000021818)	abhd13 (ENSBSLG00000021808)	tnfsf13b (ENSBSLG00000021803)	MYO16 (ENSBSLG00000021636)	IRS2 (ENSBSLG00000021626)	ENSBSLG00000021622	COL4A1 (ENSBSLG00000021590)	ENSBSLG00000021581	rab20 (ENSBSLG00000021531)
Zig-zag eel	MODERN SPECIES	13	chaf1b (ENSMAMG00000014431)	ENSMAMG00000026547	BCL9 (ENSMAMG00000014495)	acp6 (ENSMAMG00000014510)	gja5a (ENSMAMG00000014526)	gja8a (ENSMAMG00000014556)	ENSMAMG00000028402	ENSMAMG00000026812	ENSMAMG00000014638	ENSMAMG00000014710	ENSMAMG00000014588	fstl1b (ENSMAMG00000014725)	LRRC58 (ENSMAMG00000014791)	GPR156 (ENSMAMG00000014805)	ENSMAMG00000027587	gsk3ba (ENSMAMG00000014811) ##22	nr1i2 (ENSMAMG00000014844)	CFAP91 (ENSMAMG00000014855)	ENSMAMG00000014894	ENSMAMG00000028584	ENSMAMG00000027248	ENSMAMG00000014945	pdzk1 (ENSMAMG00000025791)	ENSMAMG00000014998	FAM155A (ENSMAMG00000026520)	abhd13 (ENSMAMG00000015022)	tnfsf13b (ENSMAMG00000015026)	MYO16 (ENSMAMG00000015033)	IRS2 (ENSMAMG00000015066)	COL4A1 (ENSMAMG00000015078)	ENSMAMG00000028035
Eupercaria	ANCESTRAL SPECIES	18	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00390000019377.b.f	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000161024
Fugu	MODERN SPECIES		ENSTRUG00000023542	chaf1b (ENSTRUG00000012075)	ENSTRUG00000030416	bcl9 (ENSTRUG00000012100)	acp6 (ENSTRUG00000012224)	gja5a (ENSTRUG00000012287)	gja8a (ENSTRUG00000012308)	ENSTRUG00000029177	ENSTRUG00000032667	ENSTRUG00000024110	ENSTRUG00000017525	fstl1b (ENSTRUG00000001760)	LRRC58 (ENSTRUG00000024251)	ENSTRUG00000002099	GPR156 (ENSTRUG00000025978)	gsk3ba (ENSTRUG00000002302) ##22	nr1i2 (ENSTRUG00000003245)	CFAP91 (ENSTRUG00000030900)	CFAP91 (ENSTRUG00000029945)	CFAP91 (ENSTRUG00000031985)	CFAP91 (ENSTRUG00000026435)	ENSTRUG00000032265	zgc:113337 (ENSTRUG00000004039)	GPR89B (ENSTRUG00000004132)	pdzk1 (ENSTRUG00000004427)	CCKBR (ENSTRUG00000004722)	NALF1 (ENSTRUG00000005600)	tnfsf13b (ENSTRUG00000020634)	MYO16 (ENSTRUG00000005675)	IRS2 (ENSTRUG00000006418)	ENSTRUG00000032354
Tetraodon	MODERN SPECIES	13	ackr3a (ENSTNIG00000013946)	vangl1 (ENSTNIG00000013945)	casq2 (ENSTNIG00000013944)	SLC5A3 (ENSTNIG00000013943)	DOP1B (ENSTNIG00000013942)	ENSTNIG00000013941	chaf1b (ENSTNIG00000013940)	bcl9 (ENSTNIG00000013939)	acp6 (ENSTNIG00000013938)	gja5a (ENSTNIG00000002166)	gja8a (ENSTNIG00000013937)	fstl1b (ENSTNIG00000013936)	LRRC58 (ENSTNIG00000013935)	ENSTNIG00000013934	ENSTNIG00000001394	gsk3ba (ENSTNIG00000013933) ##22	nr1i2 (ENSTNIG00000013932)	CFAP91 (ENSTNIG00000013931)	zgc:113337 (ENSTNIG00000000098)	pdzk1 (ENSTNIG00000013930)	CCKBR (ENSTNIG00000013929)	proza (ENSTNIG00000001001)	ENSTNIG00000013928	abhd13 (ENSTNIG00000013927)	tnfsf13b (ENSTNIG00000013926)	MYO16 (ENSTNIG00000013925)	IRS2 (ENSTNIG00000013924)	COL4A1 (ENSTNIG00000013923)	ENSTNIG00000013922	ENSTNIG00000013921	rab20 (ENSTNIG00000013920)
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Ballan wrasse	MODERN SPECIES	1257															ENSLBEG00000019380	gsk3ba (ENSLBEG00000019323) ##22
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000178262	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.b ##22	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796
Gilthead seabream	MODERN SPECIES	23	DOP1B (ENSSAUG00010015009)	ENSSAUG00010015003	morc3a (ENSSAUG00010015001)	chaf1b (ENSSAUG00010014996)	ENSSAUG00010014994	bcl9 (ENSSAUG00010014993)	acp6 (ENSSAUG00010014991)	gja5a (ENSSAUG00010014990)	gja8a (ENSSAUG00010014989)	ENSSAUG00010014988	ENSSAUG00010014986	ENSSAUG00010014985	fstl1b (ENSSAUG00010014500)	LRRC58 (ENSSAUG00010014487)	GPR156 (ENSSAUG00010014483)	gsk3ba (ENSSAUG00010014455) ##22	nr1i2 (ENSSAUG00010014426)	CFAP91 (ENSSAUG00010014425)	ENSSAUG00010014422	ENSSAUG00010014419	zgc:113337 (ENSSAUG00010014415)	GPR89B (ENSSAUG00010014410)	pdzk1 (ENSSAUG00010014406)	ENSSAUG00010014403	NALF1 (ENSSAUG00010014400)	abhd13 (ENSSAUG00010014398)	tnfsf13b (ENSSAUG00010014395)	MYO16 (ENSSAUG00010014248)	IRS2 (ENSSAUG00010014240)	rab20 (ENSSAUG00010014233)	naxd (ENSSAUG00010013691)
Perciformes	ANCESTRAL SPECIES	20	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000178262	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000161024
Perciformes_a	ANCESTRAL SPECIES	21	ENSGT00940000154497.B	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000178262	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000161024	ENSGT00390000000917
Pike perch	MODERN SPECIES	1	nhlh2 (ENSSLUG00000000137)	vangl1 (ENSSLUG00000000129)	casq2 (ENSSLUG00000000084)	KCNE2 (ENSSLUG00000000048)	DOP1B (ENSSLUG00000021749)	morc3a (ENSSLUG00000021725)	chaf1b (ENSSLUG00000021711)	ENSSLUG00000021699	acp6 (ENSSLUG00000021684)	gja5a (ENSSLUG00000021675)	gja8a (ENSSLUG00000021669)	ENSSLUG00000021659	fstl1b (ENSSLUG00000021634)	LRRC58 (ENSSLUG00000021623)	GPR156 (ENSSLUG00000021621)	gsk3ba (ENSSLUG00000020985) ##22	nr1i2 (ENSSLUG00000020918)	CFAP91 (ENSSLUG00000020905)	ENSSLUG00000020901	zgc:113337 (ENSSLUG00000020897)	GPR89B (ENSSLUG00000020872)	pdzk1 (ENSSLUG00000020858)	CCKBR (ENSSLUG00000020856)	NALF1 (ENSSLUG00000020852)	abhd13 (ENSSLUG00000020849)	tnfsf13b (ENSSLUG00000020846)	ENSSLUG00000020842	IRS2 (ENSSLUG00000020840)	COL4A1 (ENSSLUG00000020816)	rab20 (ENSSLUG00000020791)	naxd (ENSSLUG00000020785)
Channel bull blenny	MODERN SPECIES	13	casq2 (ENSCGOG00000021707)	DOP1B (ENSCGOG00000021457)	nqo1 (ENSCGOG00000021438)	morc3a (ENSCGOG00000021429)	chaf1b (ENSCGOG00000021364)	ENSCGOG00000021356	bcl9 (ENSCGOG00000021350)	acp6 (ENSCGOG00000021346)	gja5a (ENSCGOG00000021335)	ENSCGOG00000021334	gja8a (ENSCGOG00000021333)	ENSCGOG00000021332	ENSCGOG00000021330	fstl1b (ENSCGOG00000021315)	LRRC58 (ENSCGOG00000021314)	gsk3ba (ENSCGOG00000020623) ##22	nr1i2 (ENSCGOG00000020567)	ENSCGOG00000020558	zgc:113337 (ENSCGOG00000020556)	GPR89B (ENSCGOG00000020347)	pdzk1 (ENSCGOG00000020334)	ENSCGOG00000020330	ENSCGOG00000020295	NALF1 (ENSCGOG00000020290)	abhd13 (ENSCGOG00000020288)	tnfsf13b (ENSCGOG00000020286)	ENSCGOG00000020285	IRS2 (ENSCGOG00000020283)	COL4A1 (ENSCGOG00000020238)	ENSCGOG00000020232	ENSCGOG00000020230
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000161024	ENSGT00390000000917
Stickleback	MODERN SPECIES	16	SLC5A3 (ENSGACG00000003713)	DOP1B (ENSGACG00000003701)	ENSGACG00000003694	chaf1b (ENSGACG00000003690)	ENSGACG00000003689	bcl9 (ENSGACG00000003683)	acp6 (ENSGACG00000003672)	gja5a (ENSGACG00000003669)	gja8a (ENSGACG00000003667)	ENSGACG00000003664	fstl1b (ENSGACG00000003648)	ENSGACG00000003646	LRRC58 (ENSGACG00000003643)	ENSGACG00000003633	ENSGACG00000003631	gsk3ba (ENSGACG00000003629) ##22	CFAP91 (ENSGACG00000003624)	zgc:113337 (ENSGACG00000003619)	GPR89B (ENSGACG00000003598)	pdzk1 (ENSGACG00000003593)	CCKBR (ENSGACG00000003588)	NALF1 (ENSGACG00000003586)	abhd13 (ENSGACG00000003584)	tnfsf13b (ENSGACG00000003582)	MYO16 (ENSGACG00000003570)	IRS2 (ENSGACG00000003564)	COL4A1 (ENSGACG00000003548)	ENSGACG00000003532	rab20 (ENSGACG00000003527)	naxd (ENSGACG00000003514)	ing1 (ENSGACG00000003510)
Lumpfish	MODERN SPECIES	13	KCNE2 (ENSCLMG00005015210)	SLC5A3 (ENSCLMG00005015200)	DOP1B (ENSCLMG00005015198)	morc3a (ENSCLMG00005015197)	chaf1b (ENSCLMG00005015195)	ENSCLMG00005015193	bcl9 (ENSCLMG00005015191)	acp6 (ENSCLMG00005015190)	gja5a (ENSCLMG00005015187)	gja8a (ENSCLMG00005015186)	ENSCLMG00005015185	fstl1b (ENSCLMG00005014977)	LRRC58 (ENSCLMG00005014971)	ENSCLMG00005014969	GPR156 (ENSCLMG00005014968)	gsk3ba (ENSCLMG00005013971) ##22	CFAP91 (ENSCLMG00005013970)	ENSCLMG00005013969	zgc:113337 (ENSCLMG00005013968)	GPR89B (ENSCLMG00005013967)	pdzk1 (ENSCLMG00005013955)	ENSCLMG00005013954	NALF1 (ENSCLMG00005013953)	abhd13 (ENSCLMG00005013952)	tnfsf13b (ENSCLMG00005013951)	ENSCLMG00005013950	IRS2 (ENSCLMG00005013948)	COL4A1 (ENSCLMG00005013947)	ENSCLMG00005013945	rab20 (ENSCLMG00005013943)	naxd (ENSCLMG00005013942)
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a
Bicolor damselfish	MODERN SPECIES	1563															ENSSPAG00000020459	gsk3ba (ENSSPAG00000020393) ##22	nr1i2 (ENSSPAG00000020321)	CFAP91 (ENSSPAG00000020231)	ENSSPAG00000020216	zgc:113337 (ENSSPAG00000020192)	GPR89B (ENSSPAG00000020172)	pdzk1 (ENSSPAG00000020159)	ENSSPAG00000020061
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000014496	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00390000019377.b.f	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000014496	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a
Clown anemonefish	MODERN SPECIES	1690								nckap1l (ENSAOCG00000013514)	COL2A1 (ENSAOCG00000002210)	ENSAOCG00000010896	myg1 (ENSAOCG00000000678)	fstl1b (ENSAOCG00000010842)	LRRC58 (ENSAOCG00000010783)	ENSAOCG00000010769	GPR156 (ENSAOCG00000010746)	gsk3ba (ENSAOCG00000010716) ##22	nr1i2 (ENSAOCG00000010669)	CFAP91 (ENSAOCG00000010650)	ENSAOCG00000010624	zgc:113337 (ENSAOCG00000010602)
Orange clownfish	MODERN SPECIES	3	casq2 (ENSAPEG00000024357)	KCNE2 (ENSAPEG00000024365)	SLC5A3 (ENSAPEG00000024368)	DOP1B (ENSAPEG00000024373)	morc3a (ENSAPEG00000024391)	chaf1b (ENSAPEG00000024404)	ENSAPEG00000024416	bcl9 (ENSAPEG00000024430)	acp6 (ENSAPEG00000024439)	gja5a (ENSAPEG00000024446)	gja8a (ENSAPEG00000024449)	ENSAPEG00000024456	fstl1b (ENSAPEG00000000309)	LRRC58 (ENSAPEG00000000383)	GPR156 (ENSAPEG00000000409)	gsk3ba (ENSAPEG00000000490) ##22	nr1i2 (ENSAPEG00000000532)	CFAP91 (ENSAPEG00000000543)	ENSAPEG00000000641	ENSAPEG00000000657	zgc:113337 (ENSAPEG00000000666)	GPR89B (ENSAPEG00000000723)	pdzk1 (ENSAPEG00000000766)	ENSAPEG00000000774	NALF1 (ENSAPEG00000000789)	abhd13 (ENSAPEG00000000807)	tnfsf13b (ENSAPEG00000000809)	MYO16 (ENSAPEG00000000840)	IRS2 (ENSAPEG00000000889)	COL4A1 (ENSAPEG00000000901)	ENSAPEG00000001014
Spiny chromis	MODERN SPECIES	15	WHAMM (ENSAPOG00000004852)	FSD2 (ENSAPOG00000004867)	ENSAPOG00000004907	pde8a (ENSAPOG00000004983)	gatm (ENSAPOG00000005045)	ENSAPOG00000005065	slc27a2a (ENSAPOG00000005081)	hdc (ENSAPOG00000005147)	USP8 (ENSAPOG00000005184)	USP50 (ENSAPOG00000005219)	gja8a (ENSAPOG00000005225)	ENSAPOG00000005255	fstl1b (ENSAPOG00000005305)	LRRC58 (ENSAPOG00000005325)	GPR156 (ENSAPOG00000005361)	gsk3ba (ENSAPOG00000005406) ##22	nr1i2 (ENSAPOG00000005425)	CFAP91 (ENSAPOG00000005434)	ENSAPOG00000005476	ENSAPOG00000005500	zgc:113337 (ENSAPOG00000005542)	GPR89B (ENSAPOG00000005612)	pdzk1 (ENSAPOG00000005635)	ENSAPOG00000005666	NALF1 (ENSAPOG00000005682)	abhd13 (ENSAPOG00000005689)	tnfsf13b (ENSAPOG00000005695)	ENSAPOG00000005759	IRS2 (ENSAPOG00000005780)	ENSAPOG00000005793	ENSAPOG00000005826
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822.l.b	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Midas cichlid	MODERN SPECIES	650												fstl1b (ENSACIG00000000814)	LRRC58 (ENSACIG00000000785)	ENSACIG00000000765	GPR156 (ENSACIG00000000737)	gsk3ba (ENSACIG00000000702) ##22	nr1i2 (ENSACIG00000000616)	CFAP91 (ENSACIG00000000478)	zgc:113337 (ENSACIG00000000451)	GPR89B (ENSACIG00000000395)	pdzk1 (ENSACIG00000000365)	ENSACIG00000000228	NALF1 (ENSACIG00000000207)	abhd13 (ENSACIG00000000193)	tnfsf13b (ENSACIG00000023242)	ENSACIG00000023229	IRS2 (ENSACIG00000023218)	COL4A1 (ENSACIG00000023185)	ENSACIG00000023175	ENSACIG00000022981	rab20 (ENSACIG00000022937)
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822.l.b	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000157234
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000157234
Haplochromini	ANCESTRAL SPECIES	29								ENSGT00940000164822.k.a.a.a.a.a	ENSGT00940000164822.k.a.a.a.b.a.a	ENSGT00950000183116.a.b	ENSGT00940000163421.a.d.a.e	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000157234
Burton s mouthbrooder	MODERN SPECIES	701											ENSHBUG00000003839	zgc:194679 (ENSHBUG00000003830)	fstl1b (ENSHBUG00000003822)	LRRC58 (ENSHBUG00000003791)	GPR156 (ENSHBUG00000003778)	gsk3ba (ENSHBUG00000003773) ##22	nr1i2 (ENSHBUG00000003745)	CFAP91 (ENSHBUG00000003734)	ENSHBUG00000003722	zgc:113337 (ENSHBUG00000003711)	GPR89B (ENSHBUG00000003686)	pdzk1 (ENSHBUG00000003627)	CCKBR (ENSHBUG00000003612)	NALF1 (ENSHBUG00000003591)
Haplochromini_A	ANCESTRAL SPECIES	31						ENSGT00940000164822.k.a.a.a.b.b	ENSGT00940000164822.k.a.b.a.a.a.b	ENSGT00940000164822.k.a.a.a.a.a	ENSGT00940000164822.k.a.a.a.b.a.a	ENSGT00950000183116.a.b	ENSGT00940000163421.a.d.a.e	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000157234
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT01050000244864.D	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000164822.k.a.a.a.b.b	ENSGT00940000175300.k	ENSGT00940000164822.k.a.a.a.a.b	ENSGT00940000164822.k.a.a.a.a.a	ENSGT00940000164822.k.a.a.a.b.a.a	ENSGT00950000183116.a.b	ENSGT00940000163421.a.d.a.e	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Zebra mbuna	MODERN SPECIES	1098	gja8a (ENSMZEG00005001816)	ENSMZEG00005001804	ENSMZEG00005001797	ENSMZEG00005001772	ENSMZEG00005001752	ENSMZEG00005001730	ENSMZEG00005001712	ENSMZEG00005001679	ENSMZEG00005001652	ENSMZEG00005001640	zgc:194679 (ENSMZEG00005001637)	fstl1b (ENSMZEG00005001592)	LRRC58 (ENSMZEG00005001574)	ENSMZEG00005001557	GPR156 (ENSMZEG00005001501)	gsk3ba (ENSMZEG00005001457) ##22	nr1i2 (ENSMZEG00005001441)	CFAP91 (ENSMZEG00005001389)	ENSMZEG00005001372	zgc:113337 (ENSMZEG00005001354)	GPR89B (ENSMZEG00005001328)	pdzk1 (ENSMZEG00005001319)	CCKBR (ENSMZEG00005000406)	NALF1 (ENSMZEG00005000387)	abhd13 (ENSMZEG00005000380)	tnfsf13b (ENSMZEG00005000374)	ENSMZEG00005000289	ENSMZEG00005000278	IRS2 (ENSMZEG00005000269)	COL4A1 (ENSMZEG00005000072)	ENSMZEG00005022399
Eastern happy	MODERN SPECIES	7	ENSACLG00000004757	ENSACLG00000004714	ENSACLG00000004685	ENSACLG00000004675	ENSACLG00000004669	ENSACLG00000004630	ENSACLG00000004619	ENSACLG00000004561	ENSACLG00000004551	ENSACLG00000004544	zgc:194679 (ENSACLG00000004540)	fstl1b (ENSACLG00000004479)	LRRC58 (ENSACLG00000004446)	GPR156 (ENSACLG00000004407)	ENSACLG00000004398	gsk3ba (ENSACLG00000004350) ##22	nr1i2 (ENSACLG00000004339)	CFAP91 (ENSACLG00000004314)	ENSACLG00000004300	ENSACLG00000004290	zgc:113337 (ENSACLG00000004252)	GPR89B (ENSACLG00000004177)	pdzk1 (ENSACLG00000004164)	CCKBR (ENSACLG00000004156)	NALF1 (ENSACLG00000004152)	ENSACLG00000004144	abhd13 (ENSACLG00000004138)	tnfsf13b (ENSACLG00000004130)	MYO16 (ENSACLG00000004057)	IRS2 (ENSACLG00000004048)	COL4A1 (ENSACLG00000004000)
P. nyererei	MODERN SPECIES	485												zgc:194679 (ENSPNYG00000020739)	fstl1b (ENSPNYG00000020709)	LRRC58 (ENSPNYG00000020690)	GPR156 (ENSPNYG00000020677)	gsk3ba (ENSPNYG00000020639) ##22	nr1i2 (ENSPNYG00000020572)	CFAP91 (ENSPNYG00000020485)	ENSPNYG00000020464	zgc:113337 (ENSPNYG00000020430)	GPR89B (ENSPNYG00000020401)	pdzk1 (ENSPNYG00000020373)	CCKBR (ENSPNYG00000020354)	NALF1 (ENSPNYG00000020340)	abhd13 (ENSPNYG00000020337)	tnfsf13b (ENSPNYG00000020326)	MYO16 (ENSPNYG00000020218)	IRS2 (ENSPNYG00000020196)	COL4A1 (ENSPNYG00000019987)	COL4A2 (ENSPNYG00000019765)	rab20 (ENSPNYG00000019720)
Lyretail cichlid	MODERN SPECIES	303	gja5a (ENSNBRG00000007508)	gja8a (ENSNBRG00000007490)	ENSNBRG00000007484	ENSNBRG00000007459	ENSNBRG00000007422	ENSNBRG00000007418	ENSNBRG00000007391	ENSNBRG00000007371	ENSNBRG00000007352	ENSNBRG00000007337	ENSNBRG00000007322	ENSNBRG00000007312	fstl1b (ENSNBRG00000007282)	LRRC58 (ENSNBRG00000007254)	GPR156 (ENSNBRG00000007192)	gsk3ba (ENSNBRG00000007145) ##22	nr1i2 (ENSNBRG00000007066)	CFAP91 (ENSNBRG00000007009)	zgc:113337 (ENSNBRG00000006981)	GPR89B (ENSNBRG00000006968)	pdzk1 (ENSNBRG00000006947)	CCKBR (ENSNBRG00000006931)	NALF1 (ENSNBRG00000006921)	abhd13 (ENSNBRG00000006916)	tnfsf13b (ENSNBRG00000006826)	ENSNBRG00000006766	ENSNBRG00000006747	IRS2 (ENSNBRG00000006739)	COL4A1 (ENSNBRG00000006640)	ENSNBRG00000006604	rab20 (ENSNBRG00000006574)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000015970	ENSONIG00000035979	zgc:194679 (ENSONIG00000014405)	ENSONIG00000014406	ENSONIG00000037699	ENSONIG00000031439	ENSONIG00000037825	ENSONIG00000027432	ENSONIG00000039625	ENSONIG00000009068	ENSONIG00000033007	ENSONIG00000028509	fstl1b (ENSONIG00000014402)	LRRC58 (ENSONIG00000014400)	GPR156 (ENSONIG00000032340)	gsk3ba (ENSONIG00000014396) ##22	nr1i2 (ENSONIG00000014385)	CFAP91 (ENSONIG00000014383)	ENSONIG00000030019	cd200 (ENSONIG00000014380)	GPR89B (ENSONIG00000014375)	pdzk1 (ENSONIG00000014371)	CCKBR (ENSONIG00000014369)	abhd13 (ENSONIG00000020430)	tnfsf13b (ENSONIG00000014367)	MYO16 (ENSONIG00000014363)	IRS2 (ENSONIG00000014362)	COL4A1 (ENSONIG00000014346)	ENSONIG00000014329	rab20 (ENSONIG00000040733)	naxd (ENSONIG00000014322)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678
Oryzias	ANCESTRAL SPECIES	10	ENSGT00390000016421.b.a.q	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822.j	ENSGT00940000175300	ENSGT00940000164822.i.a	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406
Oryzias_a	ANCESTRAL SPECIES	21	ENSGT00940000161679.a	ENSGT00390000016421.b.a.q	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01030000235357.b.b.b	ENSGT01050000244864.D	ENSGT00940000164822.j	ENSGT00940000164822.i.a.a.a.a.a.a	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00890000139453.b.f	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000157234
Chinese medaka	MODERN SPECIES	460															GPR156 (ENSOSIG00000006311)	gsk3ba (ENSOSIG00000001192) ##22	CFAP91 (ENSOSIG00000001156)	ENSOSIG00000001153	GPR89B (ENSOSIG00000001146)	pdzk1 (ENSOSIG00000001143)	ENSOSIG00000001141	ENSOSIG00000001137	NALF1 (ENSOSIG00000001135)	abhd13 (ENSOSIG00000001134)	tnfsf13b (ENSOSIG00000001132)
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000161679.a	ENSGT00390000016421.b.a.r	ENSGT00940000166160.i	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000175300	ENSGT00940000164822.i.a	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT01010000222796	ENSGT00940000157234
Javanese ricefish	MODERN SPECIES	13	casq2 (ENSOJAG00000009033)	SLC5A3 (ENSOJAG00000009006)	ENSOJAG00000008881	ENSOJAG00000008856	chaf1b (ENSOJAG00000008818)	ENSOJAG00000008794	bcl9 (ENSOJAG00000008778)	acp6 (ENSOJAG00000008554)	gja5a (ENSOJAG00000008538)	gja8a (ENSOJAG00000008516)	ENSOJAG00000008475	ENSOJAG00000008398	fstl1b (ENSOJAG00000008376)	LRRC58 (ENSOJAG00000008369)	GPR156 (ENSOJAG00000008343)	gsk3ba (ENSOJAG00000008148) ##22	nr1i2 (ENSOJAG00000008076)	CFAP91 (ENSOJAG00000008020)	ENSOJAG00000008008	zgc:113337 (ENSOJAG00000007987)	GPR89B (ENSOJAG00000007783)	pdzk1 (ENSOJAG00000007727)	ENSOJAG00000007714	NALF1 (ENSOJAG00000007703)	abhd13 (ENSOJAG00000007698)	ENSOJAG00000007687	MYO16 (ENSOJAG00000007630)	IRS2 (ENSOJAG00000007609)	COL4A1 (ENSOJAG00000007373)	ENSOJAG00000007344	rab20 (ENSOJAG00000007173)
Indian medaka	MODERN SPECIES	18	ENSOMEG00000007987	chaf1b (ENSOMEG00000008033)	ENSOMEG00000008042	bcl9 (ENSOMEG00000008102)	acp6 (ENSOMEG00000001035)	gja5a (ENSOMEG00000008145)	gja8a (ENSOMEG00000008156)	ENSOMEG00000008202	ENSOMEG00000008233	ENSOMEG00000008245	ENSOMEG00000008266	fstl1b (ENSOMEG00000008314)	LRRC58 (ENSOMEG00000008345)	ENSOMEG00000008397	GPR156 (ENSOMEG00000008430)	gsk3ba (ENSOMEG00000008470) ##22	nr1i2 (ENSOMEG00000008488)	CFAP91 (ENSOMEG00000008534)	ENSOMEG00000008568	zgc:113337 (ENSOMEG00000008615)	GPR89B (ENSOMEG00000008676)	pdzk1 (ENSOMEG00000008716)	ENSOMEG00000008733	NALF1 (ENSOMEG00000008752)	abhd13 (ENSOMEG00000008763)	tnfsf13b (ENSOMEG00000008807)	MYO16 (ENSOMEG00000009150)	IRS2 (ENSOMEG00000009217)	COL4A1 (ENSOMEG00000009302)	ENSOMEG00000009332	ENSOMEG00000009360
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000178299
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894.a	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000178299
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894.b	ENSGT00730000112894.a	ENSGT00940000175333	ENSGT00940000164706.b.c	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00940000177223	ENSGT00940000173749	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894.b	ENSGT00730000112894.a.b	ENSGT00730000112894.a.a	ENSGT00940000175333	ENSGT00940000164706.b.c	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a
NAME_6	ANCESTRAL SPECIES	49											ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894.b	ENSGT00730000112894.a.b	ENSGT00730000112894.a.a	ENSGT00940000164706.b.c	ENSGT00390000000684	ENSGT00950000182849.A.f.b.r	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678
Sailfin molly	MODERN SPECIES	1060												fstl1b (ENSPLAG00000021211)	LRRC58 (ENSPLAG00000021231)	ENSPLAG00000021253	GPR156 (ENSPLAG00000021276)	gsk3ba (ENSPLAG00000021310) ##22	nr1i2 (ENSPLAG00000021338)	CFAP91 (ENSPLAG00000021342)	ENSPLAG00000021365	ENSPLAG00000021385	zgc:113337 (ENSPLAG00000021409)	ENSPLAG00000021439	ENSPLAG00000021451
Amazon molly	MODERN SPECIES	799											ENSPFOG00000022230	ENSPFOG00000007782	fstl1b (ENSPFOG00000007639)	LRRC58 (ENSPFOG00000022308)	GPR156 (ENSPFOG00000007604)	gsk3ba (ENSPFOG00000007468) ##22	nr1i2 (ENSPFOG00000007256)	CFAP91 (ENSPFOG00000007071)	ENSPFOG00000022362	ENSPFOG00000024684	ENSPFOG00000007048
Guppy	MODERN SPECIES	450	casq2 (ENSPREG00000001027)	SLC5A3 (ENSPREG00000001022)	DOP1B (ENSPREG00000001003)	ENSPREG00000000975	ENSPREG00000000961	chaf1b (ENSPREG00000000956)	ENSPREG00000000946	bcl9 (ENSPREG00000000937)	acp6 (ENSPREG00000000930)	gja5a (ENSPREG00000000914)	gja8a (ENSPREG00000000906)	ENSPREG00000000895	fstl1b (ENSPREG00000000857)	LRRC58 (ENSPREG00000000835)	GPR156 (ENSPREG00000000813)	gsk3ba (ENSPREG00000000763) ##22	nr1i2 (ENSPREG00000000644)	ENSPREG00000000628	ENSPREG00000000578	ENSPREG00000000564	ENSPREG00000000558	zgc:113337 (ENSPREG00000000555)	GPR89B (ENSPREG00000000547)	pdzk1 (ENSPREG00000000544)	ENSPREG00000022897	NALF1 (ENSPREG00000022885)	abhd13 (ENSPREG00000022880)	tnfsf13b (ENSPREG00000022876)	MYO16 (ENSPREG00000022828)	IRS2 (ENSPREG00000022810)	COL4A1 (ENSPREG00000022795)
Platyfish	MODERN SPECIES	21	ENSXMAG00000024686	morc3a (ENSXMAG00000004110)	chaf1b (ENSXMAG00000004101)	ENSXMAG00000027739	ENSXMAG00000027689	bcl9 (ENSXMAG00000004093)	acp6 (ENSXMAG00000023912)	gja5a (ENSXMAG00000004079)	ENSXMAG00000022712	gja8a (ENSXMAG00000004073)	ENSXMAG00000024723	ENSXMAG00000027373	fstl1b (ENSXMAG00000004055)	LRRC58 (ENSXMAG00000029281)	ENSXMAG00000004049	gsk3ba (ENSXMAG00000004019) ##22	nr1i2 (ENSXMAG00000022773)	CFAP91 (ENSXMAG00000003985)	ENSXMAG00000021032	ENSXMAG00000003984	zgc:113337 (ENSXMAG00000003979)	GPR89B (ENSXMAG00000003958)	pdzk1 (ENSXMAG00000003944)	ENSXMAG00000022153	ENSXMAG00000027617	NALF1 (ENSXMAG00000027412)	abhd13 (ENSXMAG00000019937)	tnfsf13b (ENSXMAG00000012582)	MYO16 (ENSXMAG00000012554)	IRS2 (ENSXMAG00000012551)	COL4A1 (ENSXMAG00000012380)
NAME_4	ANCESTRAL SPECIES	25	ENSGT00390000019377.b.f	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00940000177402	ENSGT00550000074968	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894.a	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000178299
Mummichog	MODERN SPECIES	2344												fstl1b (ENSFHEG00000016617)	LRRC58 (ENSFHEG00000016631)	ENSFHEG00000016635	GPR156 (ENSFHEG00000016644)	gsk3ba (ENSFHEG00000016694) ##22	nr1i2 (ENSFHEG00000016733)	CFAP91 (ENSFHEG00000016774)	ENSFHEG00000016789	ENSFHEG00000016796	ENSFHEG00000016810	zgc:113337 (ENSFHEG00000016828)	GPR89B (ENSFHEG00000016883)	pdzk1 (ENSFHEG00000016917)	ENSFHEG00000017047	NALF1 (ENSFHEG00000017069)	abhd13 (ENSFHEG00000017071)	tnfsf13b (ENSFHEG00000017080)	ENSFHEG00000017147	IRS2 (ENSFHEG00000017154)	COL4A1 (ENSFHEG00000017244)
Sheepshead minnow	MODERN SPECIES	476						acp6 (ENSCVAG00000013763)	gja5a (ENSCVAG00000013772)	gja8a (ENSCVAG00000013777)	ENSCVAG00000013794	hacd2 (ENSCVAG00000013850)	ENSCVAG00000013883	fstl1b (ENSCVAG00000013938)	LRRC58 (ENSCVAG00000013956)	ENSCVAG00000013964	GPR156 (ENSCVAG00000014000)	gsk3ba (ENSCVAG00000014037) ##22	nr1i2 (ENSCVAG00000014052)	CFAP91 (ENSCVAG00000014081)	ENSCVAG00000014106	casq1b (ENSCVAG00000014258)	ENSCVAG00000014289	ENSCVAG00000014307	ENSCVAG00000014317	ENSCVAG00000014334	ENSCVAG00000014349	ENSCVAG00000014356	ENSCVAG00000014363	ENSCVAG00000014369	ENSCVAG00000014374
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01090000260658	ENSGT01050000244864.D	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000161024
Turquoise killifish	MODERN SPECIES	1623	SLC5A3 (ENSNFUG00015007757)	DOPEY2 (ENSNFUG00015007747)	MORC3B (ENSNFUG00015007730)	chaf1b (ENSNFUG00015007708)	ENSNFUG00015007697	BCL9 (ENSNFUG00015007689)	ACP6 (ENSNFUG00015007668)	CX45.6 (ENSNFUG00015007663)	ENSNFUG00015007661	gja8a (ENSNFUG00015007658)	ENSNFUG00015007639	fstl1b (ENSNFUG00015007573)	LRRC58B (ENSNFUG00015007547)	ENSNFUG00015007541	GPR156 (ENSNFUG00015007535)	gsk3ba (ENSNFUG00015006717) ##22	nr1i2 (ENSNFUG00015006645)	CFAP91 (ENSNFUG00015006637)	ENSNFUG00015006632	CD200R1L (ENSNFUG00015006629)	zgc:113337 (ENSNFUG00015006625)	GPR89B (ENSNFUG00015006612)	pdzk1 (ENSNFUG00015006606)	CCKBR (ENSNFUG00015006603)	FAM155A (ENSNFUG00015006601)	ENSNFUG00015006599	tnfsf13b (ENSNFUG00015006530)	ENSNFUG00015006509	MYO16 (ENSNFUG00015006494)	IRS2 (ENSNFUG00015006483)	ENSNFUG00015006480
Mangrove rivulus	MODERN SPECIES	15									fam151b (ENSKMAG00000021847)	dhfr (ENSKMAG00000021852)	gtf2h2 (ENSKMAG00000021862)	ENSKMAG00000021874	fstl1b (ENSKMAG00000021884)	LRRC58 (ENSKMAG00000021893)	GPR156 (ENSKMAG00000021899)	gsk3ba (ENSKMAG00000021905) ##22	nr1i2 (ENSKMAG00000021918)	zgc:113337 (ENSKMAG00000021924)	GPR89B (ENSKMAG00000021933)	pdzk1 (ENSKMAG00000021940)	CCKBR (ENSKMAG00000021943)	NALF1 (ENSKMAG00000021946)	abhd13 (ENSKMAG00000021948)	tnfsf13b (ENSKMAG00000021949)	MYO16 (ENSKMAG00000021958)	IRS2 (ENSKMAG00000021977)	COL4A1 (ENSKMAG00000021991)	ENSKMAG00000022033	ENSKMAG00000022037	rab20 (ENSKMAG00000022042)	naxd (ENSKMAG00000022047)
Protacanthopterygii	ANCESTRAL SPECIES	239															ENSGT01050000244864.C.f	ENSGT00520000055635.c.a.a.b ##22	ENSGT00390000003873.n	ENSGT00390000008490	ENSGT00940000160159
Northern pike	MODERN SPECIES	21	ITSN1 (ENSELUG00000020734)	cryzl1 (ENSELUG00000020661)	setd4 (ENSELUG00000020643)	cbr1 (ENSELUG00000020616)	bcl9 (ENSELUG00000020591)	gja5b (ENSELUG00000020556)	gja8b (ENSELUG00000020543)	fstl1a (ENSELUG00000020537)	lrrc58a (ENSELUG00000020505)	ENSELUG00000025714	ENSELUG00000025932	ENSELUG00000031631	ENSELUG00000032393	ENSELUG00000032977	ENSELUG00000030316	gsk3ba (ENSELUG00000011750) ##22	TRAPPC10 (ENSELUG00000011855)	HSF2BP (ENSELUG00000011905)	ENSELUG00000011923	cbsa (ENSELUG00000011972)	u2af1 (ENSELUG00000011997)	ENSELUG00000000435	zgc:172122 (ENSELUG00000012061)	ENSELUG00000034465	ENSELUG00000007685	ENSELUG00000014987	ENSELUG00000012024	ENSELUG00000030556	ENSELUG00000015046	abcb6a (ENSELUG00000020023)	nrp2a (ENSELUG00000020100)
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	110	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t	ENSGT00940000157784.c.d	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.b.e.b ##22	ENSGT00390000003873.n.b	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.b	ENSGT00940000160835.e.a	ENSGT00990000204278	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.b	ENSGT00940000160835.e.b	ENSGT00940000166136.c	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b.d	ENSGT00940000166136.d	ENSGT00940000167103	ENSGT00940000157521.a.b.a	ENSGT00940000160639.b.a.b.b.a.b	ENSGT00390000013151.a.a.a.d	ENSGT00940000161997.a.j
Huchen	MODERN SPECIES	567	agpat3 (ENSHHUG00000027910)	pdxkb (ENSHHUG00000027883)	ENSHHUG00000027878	ENSHHUG00000027876	PKNOX1 (ENSHHUG00000027872)	ENSHHUG00000027865	ITSN1 (ENSHHUG00000027613)	cryzl1 (ENSHHUG00000027516)	cbr1 (ENSHHUG00000027511)	setd4 (ENSHHUG00000027509)	bcl9 (ENSHHUG00000027505)	gja5b (ENSHHUG00000027500)	gja8b (ENSHHUG00000027494)	fstl1a (ENSHHUG00000027405)	lrrc58a (ENSHHUG00000027398)	gsk3ba (ENSHHUG00000027328) ##22	ENSHHUG00000027323
Salmoninae_a	ANCESTRAL SPECIES	66	ENSGT00950000182836.b.b.b.a.l.b	ENSGT00390000003874.a.b.a	ENSGT00940000158589.b.b.d.a.a	ENSGT00940000159505.v.a	ENSGT00990000205068.b	ENSGT00940000157065.y.a.a	ENSGT00940000157065.y.b	ENSGT00390000013113.u	ENSGT00940000153577.A	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t.b	ENSGT00940000157784.c.d.f.b	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.b	ENSGT00940000157521.a.b.b	ENSGT00940000167103.d	ENSGT00940000166136.c	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b.d	ENSGT00940000166136.d	ENSGT00940000167103.c	ENSGT00940000157521.a.b.a	ENSGT00390000008033.s.a	ENSGT00950000183208.A.c.a.o
Oncorhynchus	ANCESTRAL SPECIES	43	ENSGT00940000159094.e.c	ENSGT00950000182836.b.b.b.a.l.b	ENSGT00390000003874.a.b.a	ENSGT00940000158589.b.b.d.a.a	ENSGT00940000159505.v.a	ENSGT00940000157065.y.b	ENSGT00390000013113.u	ENSGT00940000153577.A	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t.b	ENSGT00940000157784.c.d.e	ENSGT00940000157784.c.d.f.b	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT01000000220200	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.b	ENSGT00940000157521.a.b.b	ENSGT00940000167103.d	ENSGT00940000166136.c	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b.d	ENSGT00940000166136.d	ENSGT00940000167103.c	ENSGT00940000157521.a.b.a	ENSGT00390000008033.s.a
Oncorhynchus_a	ANCESTRAL SPECIES	77	ENSGT00940000153470.a.a.a.a.c.a	ENSGT00940000159094.e.c	ENSGT00950000182836.b.b.b.a.l.b	ENSGT00390000003874.a.b.a	ENSGT00940000158589.b.b.d.a.a	ENSGT00940000159505.v.a	ENSGT00940000157065.y.b	ENSGT00390000013113.u	ENSGT00940000153577.A	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t.b	ENSGT00940000157784.c.d.e.a	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT01000000220200	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.b	ENSGT00940000157521.a.b.b	ENSGT00940000167103.d	ENSGT00940000166136.c	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00940000160639.b.a.b.b.a.b	ENSGT00390000013151.a.a.a.d	ENSGT00940000161997.a.j	ENSGT00940000160532.g.h	ENSGT00940000154486.b.a.a.b.e.a.b.e
Chinook salmon	MODERN SPECIES	31	mgat5 (ENSOTSG00005033675)	PTH2R (ENSOTSG00005033586)	agpat3 (ENSOTSG00005033584)	pdxkb (ENSOTSG00005033434)	TMPRSS3 (ENSOTSG00005033433)	PKNOX1 (ENSOTSG00005033432)	ITSN1 (ENSOTSG00005033171)	cryzl1 (ENSOTSG00005033160)	setd4 (ENSOTSG00005033159)	cbr1 (ENSOTSG00005033158)	bcl9 (ENSOTSG00005033157)	gja5b (ENSOTSG00005033155)	gja8b (ENSOTSG00005033154)	fstl1a (ENSOTSG00005033119)	lrrc58a (ENSOTSG00005033118)	gsk3ba (ENSOTSG00005029996) ##22	ENSOTSG00005029995	TRAPPC10 (ENSOTSG00005029982)	ENSOTSG00005029964	zeb2b (ENSOTSG00005029959)	ENSOTSG00005029951	ENSOTSG00005029947	ENSOTSG00005029946	ENSOTSG00005029944	bzw1a (ENSOTSG00005029943)	ENSOTSG00005024999	ARL4C (ENSOTSG00005024981)	sh3bp4a (ENSOTSG00005024975)	s100b (ENSOTSG00005024974)	ENSOTSG00005024972	ahr2 (ENSOTSG00005024967)
Coho salmon	MODERN SPECIES	25	MGAT5 (ENSOKIG00005014718)	ENSOKIG00005014622	agpat3 (ENSOKIG00005014611)	pdxkb (ENSOKIG00005014454)	TMPRSS3 (ENSOKIG00005014428)	PKNOX1 (ENSOKIG00005014399)	ENSOKIG00005014388	ITSN1 (ENSOKIG00005013142)	cryzl1 (ENSOKIG00005012963)	setd4 (ENSOKIG00005012951)	cbr1 (ENSOKIG00005012945)	bcl9 (ENSOKIG00005012919)	gja5b (ENSOKIG00005012914)	gja8b (ENSOKIG00005012911)	fstl1a (ENSOKIG00005012758)	ENSOKIG00005012416 ##22	ENSOKIG00005012386	TRAPPC10 (ENSOKIG00005012193)	ENSOKIG00005012096	zeb2b (ENSOKIG00005012049)	ENSOKIG00005011993	ENSOKIG00005011581	ENSOKIG00005011520	ENSOKIG00005011506	bzw1a (ENSOKIG00005011297)	AOX1 (ENSOKIG00005005651)	ENSOKIG00005005392	ARL4C (ENSOKIG00005005387)	sh3bp4a (ENSOKIG00005005374)	s100b (ENSOKIG00005005357)	ENSOKIG00005005295
Rainbow trout	MODERN SPECIES	28	pdxkb (ENSOMYG00000077377)	ENSOMYG00000006962	ENSOMYG00000064086	ENSOMYG00000006896	ENSOMYG00000004934	cryzl1 (ENSOMYG00000003093)	ENSOMYG00000063705	setd4 (ENSOMYG00000002969)	cbr1 (ENSOMYG00000002963)	ENSOMYG00000075174	bcl9 (ENSOMYG00000002910)	gja5b (ENSOMYG00000002839)	gja8b (ENSOMYG00000002837)	fstl1a (ENSOMYG00000002771)	lrrc58a (ENSOMYG00000002587)	GSK3B (ENSOMYG00000002509) ##22	ENSOMYG00000051554	ENSOMYG00000057814	ENSOMYG00000002015	ENSOMYG00000001608	ENSOMYG00000001557	ENSOMYG00000001495	ENSOMYG00000001416	ENSOMYG00000001309	ENSOMYG00000074904	ENSOMYG00000045751	bzw1a (ENSOMYG00000045735)	ENSOMYG00000074775	ENSOMYG00000043426	ENSOMYG00000052594	ENSOMYG00000043038
Salmo	ANCESTRAL SPECIES	41	ENSGT00940000159094.e.c.a	ENSGT00950000182836.b.b.b.a.l.b	ENSGT00390000003874.a.b.a	ENSGT00940000158589.b.b.c	ENSGT00940000159505.v.a	ENSGT00990000205068.b	ENSGT00940000157065.y.a.a	ENSGT00390000013113.u	ENSGT00940000153577.A	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t.b	ENSGT00940000157784.c.d.f.b	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT00390000010372.o.b.a	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.b	ENSGT00940000167103.d	ENSGT00940000166136.c	ENSGT00390000012561.b.pb.b.c.b	ENSGT00950000183114.a.b.b	ENSGT00940000160639.b.a.b.b.a.b	ENSGT00390000013151.a.a.a.d	ENSGT00940000161997.a.j	ENSGT00940000160532.g.h	ENSGT00940000154486.b.a.a.b.e.a.b.e
Atlantic salmon	MODERN SPECIES	8	plcc (ENSSSAG00000006312)	pdxkb (ENSSSAG00000006375)	ENSSSAG00000006674	ENSSSAG00000006699	ENSSSAG00000006712	ENSSSAG00000006749	cryzl1 (ENSSSAG00000006909)	ENSSSAG00000087641	setd4 (ENSSSAG00000007257)	DHCA (ENSSSAG00000007266)	bcl9 (ENSSSAG00000007293)	gja5b (ENSSSAG00000120725)	gja8b (ENSSSAG00000007356)	fstl1a (ENSSSAG00000007369)	LRC58 (ENSSSAG00000007504)	GSK3B (ENSSSAG00000082990) ##22	ENSSSAG00000113930	ENSSSAG00000084610	ENSSSAG00000082370	ENSSSAG00000119875	ENSSSAG00000101072	ENSSSAG00000109868	ENSSSAG00000083284	ENSSSAG00000044053	ENSSSAG00000007982	ENSSSAG00000015043	ENSSSAG00000016689	ENSSSAG00000023548	ENSSSAG00000039284	ENSSSAG00000114401	bzw1a (ENSSSAG00000058485)
River trout	MODERN SPECIES	32	PTH2R (ENSSTUG00000040443)	agpat3 (ENSSTUG00000040430)	pdxkb (ENSSTUG00000040335)	TMPRSS3 (ENSSTUG00000040308)	PKNOX1 (ENSSTUG00000040250)	ENSSTUG00000040236	ITSN1 (ENSSTUG00000039403)	cryzl1 (ENSSTUG00000039269)	setd4 (ENSSTUG00000039243)	cbr1 (ENSSTUG00000039226)	bcl9 (ENSSTUG00000039167)	gja5b (ENSSTUG00000039159)	gja8b (ENSSTUG00000039157)	fstl1a (ENSSTUG00000038946)	lrrc58a (ENSSTUG00000038928)	gsk3ba (ENSSTUG00000038559) ##22	ENSSTUG00000038537	TRAPPC10 (ENSSTUG00000038469)	ENSSTUG00000037681	ENSSTUG00000037652	zeb2b (ENSSTUG00000037599)	ENSSTUG00000037562	ENSSTUG00000037512	ENSSTUG00000037507	bzw1a (ENSSTUG00000037155)	ENSSTUG00000037114	ENSSTUG00000032807	ARL4C (ENSSTUG00000032669)	sh3bp4a (ENSSTUG00000032651)	s100b (ENSSTUG00000032637)	ENSSTUG00000032602
Salmoninae	ANCESTRAL SPECIES	110	ENSGT00950000182836.b.b.b.a.l.b	ENSGT00390000003874.a.b.a	ENSGT00940000158589.b.b.d.a.a	ENSGT00940000159505.v.a	ENSGT00940000157065.y.b	ENSGT00990000205068.b	ENSGT00940000157065.y.a.a	ENSGT00390000013113.u	ENSGT00940000153577.A	ENSGT00510000046499.r.a	ENSGT00730000110915.b.c.a	ENSGT01050000244864.C.f.a	ENSGT01050000244864.D.t	ENSGT00940000157784.c.d	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.b.e.b ##22	ENSGT00390000003873.n.b	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.b	ENSGT00940000160835.e.a	ENSGT00990000204278	ENSGT00940000156556.h.c	ENSGT00520000055635.c.a.a.b.e.a ##22	ENSGT00390000003873.n.a	ENSGT00940000157233.c.a	ENSGT00950000183208.A.c.a.p	ENSGT00390000008033.s.b	ENSGT00940000160835.e.b	ENSGT00940000166136.c
Salmoninae_a	ANCESTRAL SPECIES	66	ENSGT00940000159160.g	ENSGT00390000001170.a.b.b	ENSGT00940000153470.a.a.a.a.c.b.a.a	ENSGT00940000159094.e.d	ENSGT00950000182836.b.b.b.a.l.a	ENSGT00390000003874.a.b.b	ENSGT00940000158589.b.b.d.a.b	ENSGT00940000159505.v.b	ENSGT00940000157065.z	ENSGT00390000013113.v	ENSGT00730000110915.b.c.b	ENSGT01050000244864.C.f.b	ENSGT01050000244864.D.t.a	ENSGT00940000157784.c.d.f.a	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.b.e.b ##22	ENSGT00390000003873.n.b	ENSGT00390000010372.o.a	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.a	ENSGT00940000167103.c	ENSGT00940000166136.d	ENSGT00390000012561.b.pb.b.d	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00940000166136.c	ENSGT00940000167103.d	ENSGT00940000157521.a.b.b	ENSGT00390000008033.s.b
Oncorhynchus	ANCESTRAL SPECIES	43	ENSGT00940000159160.g	ENSGT00390000001170.a.b.b	ENSGT00940000153470.a.a.a.a.c.b.a.a	ENSGT00940000159094.e.d	ENSGT00950000182836.b.b.b.a.l.a	ENSGT00390000003874.a.b.b	ENSGT00940000158589.b.b.d.a.b	ENSGT00940000159505.v.b	ENSGT00940000157065.z	ENSGT00390000013113.v	ENSGT00730000110915.b.c.b	ENSGT01050000244864.C.f.b	ENSGT01050000244864.D.t.a	ENSGT00940000157784.c.d.f.a	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.b.e.b ##22	ENSGT00390000003873.n.b	ENSGT00390000010372.o.a	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.a	ENSGT00940000167103.c	ENSGT00940000166136.d	ENSGT00390000012561.b.pb.b.d	ENSGT00950000183114.a.b.b	ENSGT00390000012561.b.pb.b.c.a.a	ENSGT00940000166136.c	ENSGT00940000167103.d	ENSGT00940000157521.a.b.b	ENSGT00390000008033.s.b
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00940000159160.g	ENSGT00390000001170.a.b.b	ENSGT00940000153470.a.a.a.a.c.b.a.a	ENSGT00940000159094.e.d	ENSGT00950000182836.b.b.b.a.l.a	ENSGT00390000003874.a.b.b	ENSGT00940000158589.b.b.d.a.b	ENSGT00940000159505.v.b	ENSGT00940000157065.z	ENSGT00390000013113.v	ENSGT00730000110915.b.c.b	ENSGT01050000244864.C.f.b	ENSGT01050000244864.D.t.a	ENSGT00940000157784.c.d.f.b	ENSGT00940000156556.h.d	ENSGT00520000055635.c.a.a.b.e.b ##22	ENSGT00390000003873.n.b	ENSGT00390000010372.o.a	ENSGT00940000157233.c.b	ENSGT00950000183208.A.c.a.o	ENSGT00390000008033.s.a	ENSGT00940000157521.a.b.a	ENSGT00940000167103.c	ENSGT00940000166136.d	ENSGT00390000012561.b.pb.b.d	ENSGT00950000183114.a.b.b	ENSGT00940000160639.b.a.b.b.a.a	ENSGT00390000013151.a.a.a.c	ENSGT00940000161997.a.i	ENSGT00940000160532.g.g	ENSGT00940000154486.b.a.a.b.e.a.b.f
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	5	cpb2 (ENSOTSG00005044803)	TMEM163 (ENSOTSG00005044801)	mgat5 (ENSOTSG00005044799)	PTH2R (ENSOTSG00005044795)	agpat3 (ENSOTSG00005044788)	pdxkb (ENSOTSG00005044714)	ENSOTSG00005044709	ENSOTSG00005044707	ENSOTSG00005044504	cryzl1 (ENSOTSG00005044501)	bcl9 (ENSOTSG00005044498)	gja5b (ENSOTSG00005044497)	gja8b (ENSOTSG00005044496)	fstl1a (ENSOTSG00005044471)	lrrc58a (ENSOTSG00005044465)	gsk3ba (ENSOTSG00005044041) ##22	TRAPPC10 (ENSOTSG00005044030)	zgc:194242 (ENSOTSG00005044029)	ENSOTSG00005043690	ENSOTSG00005043687	zeb2b (ENSOTSG00005043615)	ENSOTSG00005043609	ENSOTSG00005043605	ENSOTSG00005043591	ENSOTSG00005043573	ENSOTSG00005043572	bzw1a (ENSOTSG00005043571)	aox5 (ENSOTSG00005042834)	ARL4C (ENSOTSG00005042816)	sh3bp4a (ENSOTSG00005042815)	s100b (ENSOTSG00005042814)
Chinook salmon	MODERN SPECIES	31	cpb2 (ENSOTSG00005022263)	TMEM163 (ENSOTSG00005022264)	mgat5 (ENSOTSG00005022269)	PTH2R (ENSOTSG00005022295)	agpat3 (ENSOTSG00005022299)	pdxkb (ENSOTSG00005022300)	ENSOTSG00005022305	ENSOTSG00005022306	ITSN1 (ENSOTSG00005022307)	cryzl1 (ENSOTSG00005022413)	bcl9 (ENSOTSG00005022419)	gja5b (ENSOTSG00005022422)	gja8b (ENSOTSG00005022423)	fstl1a (ENSOTSG00005022427)	lrrc58a (ENSOTSG00005022430)	gsk3ba (ENSOTSG00005022442) ##22	TRAPPC10 (ENSOTSG00005023480)	zgc:194242 (ENSOTSG00005023527)	ENSOTSG00005023534	ENSOTSG00005024671	zeb2b (ENSOTSG00005024672)	ENSOTSG00005024717	ENSOTSG00005024722	ENSOTSG00005024732	ENSOTSG00005024733	ENSOTSG00005024735	bzw1a (ENSOTSG00005024737)	aox5 (ENSOTSG00005024759)	ARL4C (ENSOTSG00005027585)	sh3bp4a (ENSOTSG00005027586)	s100b (ENSOTSG00005027588)
Coho salmon	MODERN SPECIES	7	alg11 (ENSOKIG00005030601)	TMEM163 (ENSOKIG00005030622)	mgat5 (ENSOKIG00005030698)	PTH2R (ENSOKIG00005030757)	agpat3 (ENSOKIG00005030992)	pdxkb (ENSOKIG00005031043)	PKNOX1 (ENSOKIG00005031285)	ENSOKIG00005031299	ITSN1 (ENSOKIG00005031417)	cryzl1 (ENSOKIG00005032013)	bcl9 (ENSOKIG00005032136)	gja5b (ENSOKIG00005032228)	gja8b (ENSOKIG00005032234)	fstl1a (ENSOKIG00005032248)	lrrc58a (ENSOKIG00005032318)	GSK3B (ENSOKIG00005032382) ##22	TRAPPC10 (ENSOKIG00005032949)	ENSOKIG00005033373	ENSOKIG00005033422	ZEB2 (ENSOKIG00005034051)	ENSOKIG00005034109	KYNU (ENSOKIG00005034121)	ENSOKIG00005034234	ENSOKIG00005035002	ENSOKIG00005035046	bzw1a (ENSOKIG00005035073)	aox5 (ENSOKIG00005037375)	ENSOKIG00005050768	S100B (ENSOKIG00005050770)	ARL4C (ENSOKIG00005050771)	sh3bp4a (ENSOKIG00005050774)
Rainbow trout	MODERN SPECIES	9	cpb2 (ENSOMYG00000034176)	ENSOMYG00000039305	ENSOMYG00000034120	ENSOMYG00000034060	ENSOMYG00000027279	agpat3 (ENSOMYG00000026986)	ENSOMYG00000026885	ENSOMYG00000026780	ENSOMYG00000025910	cryzl1 (ENSOMYG00000025324)	bcl9 (ENSOMYG00000025199)	gja5b (ENSOMYG00000025151)	gja8b (ENSOMYG00000025145)	fstl1a (ENSOMYG00000068136)	lrrc58a (ENSOMYG00000024988)	GSK3B (ENSOMYG00000024692) ##22	ENSOMYG00000024550	ENSOMYG00000023464	ENSOMYG00000022909	ENSOMYG00000049283	ENSOMYG00000022771	ENSOMYG00000022709	ENSOMYG00000059790	ENSOMYG00000066520	ENSOMYG00000022553	ENSOMYG00000022532	bzw1a (ENSOMYG00000022459)	aox5 (ENSOMYG00000021465)	ENSOMYG00000020913	sh3bp4a (ENSOMYG00000020902)	s100b (ENSOMYG00000020886)
Salmo	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.a.b.e.b ##22
River trout	MODERN SPECIES	36	TMEM163 (ENSSTUG00000014881)	mgat5 (ENSSTUG00000014911)	PTH2R (ENSSTUG00000014994)	agpat3 (ENSSTUG00000015126)	pdxkb (ENSSTUG00000015202)	ENSSTUG00000015335	ENSSTUG00000015341	ITSN1 (ENSSTUG00000015611)	cryzl1 (ENSSTUG00000017394)	bcl9 (ENSSTUG00000017500)	gja5b (ENSSTUG00000017522)	ENSSTUG00000017526	gja8b (ENSSTUG00000017529)	fstl1a (ENSSTUG00000017559)	lrrc58a (ENSSTUG00000017989)	gsk3ba (ENSSTUG00000018010) ##22	ENSSTUG00000018115	TRAPPC10 (ENSSTUG00000018176)	ENSSTUG00000019153	ENSSTUG00000019214	zeb2b (ENSSTUG00000020219)	ENSSTUG00000020296	ENSSTUG00000020404	ENSSTUG00000021533	ENSSTUG00000021539	ENSSTUG00000021621	bzw1a (ENSSTUG00000021656)	aox5 (ENSSTUG00000023990)	ARL4C (ENSSTUG00000050415)	sh3bp4a (ENSSTUG00000050422)	s100b (ENSSTUG00000050427)
Huchen	MODERN SPECIES	216	TMEM163 (ENSHHUG00000024983)	MGAT5 (ENSHHUG00000024903)	ENSHHUG00000024830	agpat3 (ENSHHUG00000024810)	pdxkb (ENSHHUG00000024802)	ENSHHUG00000024796	ENSHHUG00000024768	ENSHHUG00000024613	cryzl1 (ENSHHUG00000024589)	cbr1 (ENSHHUG00000024580)	bcl9 (ENSHHUG00000024559)	gja5b (ENSHHUG00000024555)	gja8b (ENSHHUG00000024548)	fstl1a (ENSHHUG00000024498)	lrrc58a (ENSHHUG00000024495)	gsk3ba (ENSHHUG00000024002) ##22	TRAPPC10 (ENSHHUG00000023974)	ACVR2A (ENSHHUG00000023422)
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	370	ENSGT00940000168097.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00940000157543.gb	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000175300	ENSGT00940000164822.db.a	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.a.a
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000168097.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.d	ENSGT00940000175300	ENSGT00940000164822.db.a.c	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.a.a	ENSGT00940000158114.g	ENSGT00940000157536.a.a.d	ENSGT00940000158920.e	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000157234.sb.b	ENSGT00940000161024.a.a
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000168097.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00940000157543.gb	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.c	ENSGT00940000175300	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.a.a	ENSGT00940000158114.g	ENSGT00940000157536.a.a.d	ENSGT00940000158920.e	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000157234.sb.b	ENSGT00940000161024.a.a
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000063093	BCL9 (ENSSSAG00000063108)	acp6 (ENSSSAG00000063120)	gja5a (ENSSSAG00000119255)	gja8a (ENSSSAG00000063143)	ENSSSAG00000063201	ENSSSAG00000104164	ENSSSAG00000063155	ENSSSAG00000104928	ENSSSAG00000063185	ENSSSAG00000063205	fstl1b (ENSSSAG00000063226)	LRRC58 (ENSSSAG00000063537)	GPR156 (ENSSSAG00000063548)	ENSSSAG00000101831	GSK3B (ENSSSAG00000122050) ##22	nr1i2 (ENSSSAG00000065353)	ENSSSAG00000090564	ENSSSAG00000118219	cd200 (ENSSSAG00000065366)	si:ch73-390b10.2 (ENSSSAG00000065376)	pdzk1 (ENSSSAG00000065389)	ENSSSAG00000113841	ENSSSAG00000116522	ENSSSAG00000038452	NALF1 (ENSSSAG00000118945)	abhd13 (ENSSSAG00000104942)	tnfsf13b (ENSSSAG00000065403)	MYO16 (ENSSSAG00000092568)	ENSSSAG00000091293	IRS2 (ENSSSAG00000065410)
River trout	MODERN SPECIES	16	DOP1B (ENSSTUG00000007601)	morc3a (ENSSTUG00000007695)	chaf1b (ENSSTUG00000007711)	ENSSTUG00000007736	BCL9 (ENSSTUG00000007749)	acp6 (ENSSTUG00000007757)	gja5a (ENSSTUG00000007814)	gja8a (ENSSTUG00000007818)	ENSSTUG00000007843	ENSSTUG00000007885	ENSSTUG00000007902	ENSSTUG00000008002	fstl1b (ENSSTUG00000008018)	LRRC58 (ENSSTUG00000008144)	GPR156 (ENSSTUG00000008151)	GSK3B (ENSSTUG00000008181) ##22	nr1i2 (ENSSTUG00000008767)	ENSSTUG00000008781	ENSSTUG00000008785	zgc:113337 (ENSSTUG00000008813)	ENSSTUG00000008822	pdzk1 (ENSSTUG00000008859)	CCKBR (ENSSTUG00000008870)	NALF1 (ENSSTUG00000008880)	ENSSTUG00000008884	abhd13 (ENSSTUG00000008897)	tnfsf13b (ENSSTUG00000008902)	MYO16 (ENSSTUG00000008926)	IRS2 (ENSSTUG00000008992)	COL4A1 (ENSSTUG00000009003)	COL4A2 (ENSSTUG00000009058)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000168097.a.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.d	ENSGT00940000164822.db.a.c	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.b	ENSGT00940000158114.g	ENSGT00940000157536.a.a.d	ENSGT00940000158920.e	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000168406.i	ENSGT00940000161024.a.a
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000168097.a.a	ENSGT00390000016421.b.a.e	ENSGT00940000166160.ab.a	ENSGT00550000074968.i	ENSGT00900000141090.t.sb.b	ENSGT00730000110915.b.d.b	ENSGT00940000158408.k.a	ENSGT01050000244864.C.e.f	ENSGT01050000244864.D.s.b	ENSGT00940000164822.db.a.d	ENSGT00940000164822.db.a.c	ENSGT00940000157784.c.c.d	ENSGT00940000156556.g.g.a	ENSGT00940000159755.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00520000055635.c.a.a.b.f.a ##22	ENSGT00940000161118	ENSGT00990000204624.e	ENSGT00940000175333.b	ENSGT00940000164706.b.e	ENSGT00390000000684.w	ENSGT00950000182849.A.f.b.v	ENSGT01100000263563.c.a.a.d	ENSGT00940000155696.tb.h.b	ENSGT00940000158114.g	ENSGT01010000228814	ENSGT00940000161407.a.c	ENSGT00940000157678.nb.b	ENSGT00940000168406.i	ENSGT00940000161024.a.a	ENSGT00390000000917.k
Chinook salmon	MODERN SPECIES	22	vangl1 (ENSOTSG00005000446)	casq2 (ENSOTSG00005000448)	KCNE2 (ENSOTSG00005000451)	SLC5A3 (ENSOTSG00005000452)	atp5po (ENSOTSG00005000453)	ENSOTSG00005000455	DOP1B (ENSOTSG00005000456)	morc3a (ENSOTSG00005000460)	chaf1b (ENSOTSG00005000462)	ENSOTSG00005000464	BCL9 (ENSOTSG00005000465)	acp6 (ENSOTSG00005000468)	gja5a (ENSOTSG00005000470)	gja8a (ENSOTSG00005000472)	ENSOTSG00005000475 ##22	ENSOTSG00005000474 ##22	nr1i2 (ENSOTSG00005000476)	ENSOTSG00005000479	ENSOTSG00005000487	zgc:113337 (ENSOTSG00005000493)	GPR89B (ENSOTSG00005000500)	pdzk1 (ENSOTSG00005000523)	ENSOTSG00005000528	NALF1 (ENSOTSG00005000532)	abhd13 (ENSOTSG00005000537)	ENSOTSG00005000541	ENSOTSG00005000545	jade1 (ENSOTSG00005000552)	nsd2 (ENSOTSG00005000633)	letm1 (ENSOTSG00005000653)	kctd16a (ENSOTSG00005000993)
Coho salmon	MODERN SPECIES	11	atp5po (ENSOKIG00005002927)	ENSOKIG00005002939	DOP1B (ENSOKIG00005002981)	morc3a (ENSOKIG00005003070)	chaf1b (ENSOKIG00005003095)	ENSOKIG00005003113	BCL9 (ENSOKIG00005003117)	acp6 (ENSOKIG00005003128)	gja5a (ENSOKIG00005003140)	gja8a (ENSOKIG00005003143)	ENSOKIG00005003158	ENSOKIG00005003184	fstl1b (ENSOKIG00005027149)	LRRC58 (ENSOKIG00005027829)	GPR156 (ENSOKIG00005027845)	GSK3B (ENSOKIG00005027874) ##22	ENSOKIG00005028050	nr1i2 (ENSOKIG00005028060)	ENSOKIG00005028071	ENSOKIG00005028083	zgc:113337 (ENSOKIG00005028092)	GPR89B (ENSOKIG00005028123)	pdzk1 (ENSOKIG00005028176)	CCKBR (ENSOKIG00005028193)	ENSOKIG00005028201	abhd13 (ENSOKIG00005028206)	ENSOKIG00005028215	IRS2 (ENSOKIG00005028292)	COL4A1 (ENSOKIG00005028312)	ENSOKIG00005028402	rab20 (ENSOKIG00005028523)
Huchen	MODERN SPECIES	815											ENSHHUG00000050373	ENSHHUG00000050374	fstl1b (ENSHHUG00000050378)	LRRC58 (ENSHHUG00000050416)	GPR156 (ENSHHUG00000050438)	GSK3B (ENSHHUG00000050443) ##22	nr1i2 (ENSHHUG00000050537)	ENSHHUG00000050542	ENSHHUG00000050545	zgc:113337 (ENSHHUG00000050548)	ENSHHUG00000050551	pdzk1 (ENSHHUG00000050557)
Salmoninae	ANCESTRAL SPECIES	146	ENSGT00390000015060.kb.a.a	ENSGT00510000046499.r.b	ENSGT00390000016421.b.a.f	ENSGT00940000166160.`b	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00900000141090.t.sb.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00520000055635.c.a.a.a ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00390000000684.x	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678	ENSGT00940000168406
Huchen	MODERN SPECIES	653																ENSHHUG00000047575 ##22	CFAP91 (ENSHHUG00000047557)	ENSHHUG00000047545	ENSHHUG00000047539	zgc:113337 (ENSHHUG00000047531)	ENSHHUG00000047525	ENSHHUG00000047522	pdzk1 (ENSHHUG00000047520)	CCKBR (ENSHHUG00000047510)	camkk1a (ENSHHUG00000047500)	p2rx1 (ENSHHUG00000047487)	ENSHHUG00000047480	c1qbp (ENSHHUG00000047477)	ENSHHUG00000047464	ENSHHUG00000047460	ENSHHUG00000047449
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00390000016421.b.a.f	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00940000177223.a	ENSGT00900000141090.t.sb.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT01040000240385.A.b.b.a.a.a.a.b.a	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.b	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00390000000684.x	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678.nb.a	ENSGT00940000168406.j	ENSGT00940000178299
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00510000046499.r.b	ENSGT00390000016421.b.a.f	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00940000177223.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT01040000240385.A.b.b.a.a.a.a.b.a	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.b	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678.nb.a	ENSGT00940000178299	ENSGT00940000168406.j	ENSGT00940000161024.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00390000016421.b.a.f	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00940000177223.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT01040000240385.A.b.b.a.a.a.a.b.a	ENSGT01040000240385.A.b.b.a.b.a.a.b.b.b	ENSGT00940000156556.g.g.b	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678.nb.a	ENSGT00940000178299	ENSGT00940000168406.j	ENSGT00940000161024.a.b
Chinook salmon	MODERN SPECIES	18	KCNE2 (ENSOTSG00005003008)	SLC5A3 (ENSOTSG00005003006)	atp5po (ENSOTSG00005003000)	DOP1B (ENSOTSG00005013614)	ENSOTSG00005013613	chaf1b (ENSOTSG00005013607)	ENSOTSG00005013605	BCL9 (ENSOTSG00005013604)	acp6 (ENSOTSG00005013603)	gja5a (ENSOTSG00005013602)	gja8a (ENSOTSG00005013601)	ENSOTSG00005013600	fstl1b (ENSOTSG00005013465)	LRRC58 (ENSOTSG00005013461)	GPR156 (ENSOTSG00005013459)	GSK3B (ENSOTSG00005013424) ##22	CFAP91 (ENSOTSG00005013420)	ENSOTSG00005013416	ENSOTSG00005013412	zgc:113337 (ENSOTSG00005013409)	pdzk1 (ENSOTSG00005013400)	CCKBR (ENSOTSG00005013399)	NALF1 (ENSOTSG00005013398)	abhd13 (ENSOTSG00005013397)	tnfsf13b (ENSOTSG00005013396)	IRS2 (ENSOTSG00005013393)	ENSOTSG00005013392	ENSOTSG00005013391	ENSOTSG00005013387	rab20 (ENSOTSG00005013386)	naxd (ENSOTSG00005013385)
Coho salmon	MODERN SPECIES	18	CBR1 (ENSOKIG00005013774)	DOP1B (ENSOKIG00005013707)	atp5po (ENSOKIG00005013670)	chaf1b (ENSOKIG00005013623)	ENSOKIG00005013605	BCL9 (ENSOKIG00005013563)	acp6 (ENSOKIG00005013517)	gja5a (ENSOKIG00005013507)	gja8a (ENSOKIG00005013498)	ENSOKIG00005013493	ENSOKIG00005013483	FSTL1 (ENSOKIG00005013133)	LRRC58 (ENSOKIG00005013099)	ENSOKIG00005013083	ENSOKIG00005013071	GSK3B (ENSOKIG00005012978) ##22	CFAP91 (ENSOKIG00005012904)	ENSOKIG00005012881	ENSOKIG00005012859	ENSOKIG00005012830	pdzk1 (ENSOKIG00005012816)	CCKBR (ENSOKIG00005012803)	NALF1 (ENSOKIG00005012787)	abhd13 (ENSOKIG00005012781)	tnfsf13b (ENSOKIG00005012767)	MYO16 (ENSOKIG00005012690)	IRS2 (ENSOKIG00005012670)	COL4A1 (ENSOKIG00005012616)	ENSOKIG00005035291	ENSOKIG00005035086	rab20 (ENSOKIG00005035072)
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000161679.a.f	ENSGT00390000015060.kb.a.a	ENSGT00990000214232	ENSGT00390000016421.b.a.f	ENSGT00940000166160.ab.b	ENSGT00550000074968.j	ENSGT00900000141090.t.sb.a	ENSGT00730000110915.b.d.a	ENSGT00940000158408.l	ENSGT01050000244864.C.e.e	ENSGT01050000244864.D.s.a	ENSGT00940000164822.db.b	ENSGT00940000157784.c.c.c	ENSGT00940000156556.g.h	ENSGT00940000159755.g	ENSGT00520000055635.c.a.a.b.f.b ##22	ENSGT00390000003024	ENSGT00990000204624.f	ENSGT00940000175333.a	ENSGT00940000164706.b.f	ENSGT00390000000684.x	ENSGT00950000182849.A.f.b.u	ENSGT01100000263563.c.a.a.c	ENSGT00940000155696.tb.g	ENSGT00940000158114.h	ENSGT00940000157536.a.a.c	ENSGT00940000158920.f	ENSGT00940000161407.a.d	ENSGT00940000157678.nb.a	ENSGT00940000168406.j	ENSGT00940000178299
Atlantic salmon	MODERN SPECIES	13	DOP1B (ENSSSAG00000042986)	morc3a (ENSSSAG00000092286)	chaf1b (ENSSSAG00000042565)	ENSSSAG00000042541	BCL9 (ENSSSAG00000042529)	ppa6 (ENSSSAG00000042468)	gja5a (ENSSSAG00000042461)	gja8a (ENSSSAG00000042447)	ENSSSAG00000093353	ENSSSAG00000086573	ENSSSAG00000042427	fstl1 (ENSSSAG00000041793)	LRRC58 (ENSSSAG00000041778)	ENSSSAG00000100346	ENSSSAG00000041764	GSK3B (ENSSSAG00000090406) ##22	maats1 (ENSSSAG00000039954)	ENSSSAG00000039924	ENSSSAG00000039883	ox2g (ENSSSAG00000039791)	ENSSSAG00000039255	pdzk1 (ENSSSAG00000039199)	ENSSSAG00000065392	ENSSSAG00000089837	ENSSSAG00000094336	abhd13 (ENSSSAG00000081926)	MYO16 (ENSSSAG00000031736)	IRS2 (ENSSSAG00000031099)	COL4A1 (ENSSSAG00000029801)	ENSSSAG00000029049	NAXD (ENSSSAG00000027563)
River trout	MODERN SPECIES	12	atp5po (ENSSTUG00000008290)	ENSSTUG00000008355	DOP1B (ENSSTUG00000008450)	ENSSTUG00000008794	chaf1b (ENSSTUG00000008809)	ENSSTUG00000008839	BCL9 (ENSSTUG00000008851)	acp6 (ENSSTUG00000008881)	gja5a (ENSSTUG00000008924)	gja8a (ENSSTUG00000008930)	ENSSTUG00000008939	ENSSTUG00000008971	fstl1b (ENSSTUG00000008997)	LRRC58 (ENSSTUG00000009407)	GPR156 (ENSSTUG00000009411)	GSK3B (ENSSTUG00000009431) ##22	CFAP91 (ENSSTUG00000009956)	ENSSTUG00000010020	ENSSTUG00000010032	zgc:113337 (ENSSTUG00000010070)	ENSSTUG00000010116	pdzk1 (ENSSTUG00000010122)	CCKBR (ENSSTUG00000010130)	NALF1 (ENSSTUG00000010140)	ENSSTUG00000010143	tnfsf13b (ENSSTUG00000010149)	MYO16 (ENSSTUG00000010165)	IRS2 (ENSSTUG00000010233)	ENSSTUG00000010241	ENSSTUG00000010310	ENSSTUG00000010322
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Osteoglossiformes	ANCESTRAL SPECIES	32	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT00390000016421.b.a	ENSGT00940000166160.mb	ENSGT00940000166160.lb	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b.l	ENSGT00940000158408.f	ENSGT01050000244864.D.w	ENSGT00940000164822	ENSGT00940000157784.c.b	ENSGT00940000156556.i	ENSGT00940000159755.b	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00530000063970.e	ENSGT00940000164706.b	ENSGT01030000235355	ENSGT00950000183152.B.c.a	ENSGT00510000047027.c.d	ENSGT00940000160159	ENSGT00940000154989.d	ENSGT00390000008490	ENSGT00940000155075.a.a	ENSGT00940000155401	ENSGT00390000006347.b	ENSGT00390000000917
Asian bonytongue	MODERN SPECIES	3	DOP1B (ENSSFOG00015011228)	ENSSFOG00015011292	ENSSFOG00015027146	morc3a (ENSSFOG00015011337)	chaf1b (ENSSFOG00015011382)	ENSSFOG00015026698	BCL9 (ENSSFOG00015011492)	acp6 (ENSSFOG00015011538)	gja5a (ENSSFOG00015011556)	GJA8 (ENSSFOG00015011559)	ENSSFOG00015024920	ENSSFOG00015009646	FSTL1 (ENSSFOG00015009698)	LRRC58 (ENSSFOG00015009730)	GPR156 (ENSSFOG00015009744)	ENSSFOG00015009787 ##22	nr1i2 (ENSSFOG00015009812)	CFAP91 (ENSSFOG00015009886)	MMRN1 (ENSSFOG00015010048)	ENSSFOG00015010103	ENSSFOG00015010157	mfsd10 (ENSSFOG00015032058)	ADD1 (ENSSFOG00015010292)	SMAD7 (ENSSFOG00015022632)	ZBTB7C (ENSSFOG00015032481)	zgc:86839 (ENSSFOG00015025028)	ENSSFOG00015010409	SEMA4D (ENSSFOG00015010431)	prlrb (ENSSFOG00015026402)	ENSSFOG00015032980	MALT1 (ENSSFOG00015010471)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Otomorpha	ANCESTRAL SPECIES	267	ENSGT01050000244891.C.c.b.q	ENSGT00390000011048.w	ENSGT00940000161898	ENSGT00940000171515	ENSGT00950000182836.b.b.b.a	ENSGT00390000003874.a.b	ENSGT00940000158589.b.b	ENSGT00940000157065	ENSGT00390000013113	ENSGT00940000153577.A	ENSGT00510000046499	ENSGT01050000244864.C.f.f	ENSGT01050000244864.D	ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.b ##22
Otophysi	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Electric eel	MODERN SPECIES	121													pald1a (ENSEEEG00000024405)	ENSEEEG00000024404	lrrc20 (ENSEEEG00000024403)	ENSEEEG00000024401 ##22	ENSEEEG00000024400	caly (ENSEEEG00000024399)	ENSEEEG00000024398	ENSEEEG00000024397	ENSEEEG00000024395	ENSEEEG00000024394	gss (ENSEEEG00000024392)	ENSEEEG00000024391	rps21 (ENSEEEG00000024390)	acss2 (ENSEEEG00000024385)	SOGA1 (ENSEEEG00000024380)	osbpl2b (ENSEEEG00000024377)	ADRM1 (ENSEEEG00000024376)	lama5 (ENSEEEG00000024369)	ENSEEEG00000024368
Clupeiformes	ANCESTRAL SPECIES	1										ENSGT00940000164822	ENSGT00940000180576	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.a.b ##22	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00990000204624	ENSGT00940000164706.b	ENSGT00940000158367.f	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT00940000165376	ENSGT00940000160555	ENSGT00940000157300	ENSGT00940000154334	ENSGT00940000157498	ENSGT00940000158856	ENSGT00940000156336	ENSGT00940000153859.a
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	19	COL4A2 (ENSDCDG00000023807)	ENSDCDG00000023803	ENSDCDG00000023801	COL4A1 (ENSDCDG00000023749)	IRS2 (ENSDCDG00000023734)	MYO16 (ENSDCDG00000023641)	tnfsf13b (ENSDCDG00000023628)	abhd13 (ENSDCDG00000023627)	ENSDCDG00000023625	NALF1 (ENSDCDG00000023622)	ENSDCDG00000023615	ENSDCDG00000023463	fstl1b (ENSDCDG00000023155)	LRRC58 (ENSDCDG00000023144)	GPR156 (ENSDCDG00000023143)	gsk3ba (ENSDCDG00000022805) ##22	nr1i2 (ENSDCDG00000022788)	CFAP91 (ENSDCDG00000022779)	ENSDCDG00000022774	zgc:113337 (ENSDCDG00000022761)	arl5a (ENSDCDG00000022634)	cacnb4a (ENSDCDG00000019917)	ENSDCDG00000019852	slc39a10 (ENSDCDG00000019850)	ENSDCDG00000019846	tmeff2a (ENSDCDG00000019844)	cavin2a (ENSDCDG00000019840)	nabp1a (ENSDCDG00000019837)	ftcdnl1 (ENSDCDG00000019835)	zgc:153521 (ENSDCDG00000019834)	stk17b (ENSDCDG00000019832)
Denticle herring	MODERN SPECIES	15	spryd7a (ENSDCDG00000002886)	dleu7 (ENSDCDG00000002876)	agpat3 (ENSDCDG00000002869)	pdxkb (ENSDCDG00000002856)	ENSDCDG00000002850	PKNOX1 (ENSDCDG00000002847)	ITSN1 (ENSDCDG00000001544)	cryzl1 (ENSDCDG00000001377)	cbr1 (ENSDCDG00000001369)	morc3b (ENSDCDG00000001368)	bcl9 (ENSDCDG00000001363)	gja5b (ENSDCDG00000001360)	gja8b (ENSDCDG00000001358)	fstl1a (ENSDCDG00000001332)	lrrc58a (ENSDCDG00000001322)	ENSDCDG00000001189 ##22	anos1a (ENSDCDG00000001086)	STS (ENSDCDG00000000963)	pnpla4 (ENSDCDG00000000933)	pudp (ENSDCDG00000000919)	nlgn4xa (ENSDCDG00000000882)	PRKX (ENSDCDG00000000871)	MXRA5 (ENSDCDG00000000853)	gyg2 (ENSDCDG00000000800)	cd99 (ENSDCDG00000000789)	DHRSX (ENSDCDG00000000786)	CREB1 (ENSDCDG00000000780)	chmp2bb (ENSDCDG00000000771)	HTR1F (ENSDCDG00000000767)	ENSDCDG00000000764	ZNF654 (ENSDCDG00000000761)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.b ##22	ENSGT00520000055635.c.a.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT00940000154497.B	ENSGT00940000161679.a	ENSGT00390000016421.b.a	ENSGT00940000166160	ENSGT00550000074968	ENSGT00940000177223	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000164822	ENSGT00940000175300	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT00940000159755	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00730000112894	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00990000210921	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678
European seabass	MODERN SPECIES	5	ENSDLAG00005030393	ENSDLAG00005025564	chaf1b (ENSDLAG00005025565)	ENSDLAG00005025566	BCL9 (ENSDLAG00005025568)	acp6 (ENSDLAG00005033642)	GJA5 (ENSDLAG00005030432)	gja8a (ENSDLAG00005032926)	ENSDLAG00005025579	ENSDLAG00005025580	ENSDLAG00005009959	ENSDLAG00005025582	fstl1b (ENSDLAG00005025587)	LRRC58 (ENSDLAG00005025624)	GPR156 (ENSDLAG00005004300)	gsk3ba (ENSDLAG00005004479) ##22	nr1i2 (ENSDLAG00005006791)	CFAP91 (ENSDLAG00005030326)	ENSDLAG00005007138	ENSDLAG00005007165	ENSDLAG00005007178	pdzk1 (ENSDLAG00005007282)	ENSDLAG00005033221	ENSDLAG00005033587	ENSDLAG00005029663	abhd13 (ENSDLAG00005033632)	MYO16 (ENSDLAG00005007337)	IRS2 (ENSDLAG00005007569)	COL4A1 (ENSDLAG00005029841)	ENSDLAG00005007608	rab20 (ENSDLAG00005030133)
Large yellow croaker	MODERN SPECIES	490	SLC5A3 (ENSLCRG00005013400)	DOP1B (ENSLCRG00005013402)	morc3a (ENSLCRG00005013407)	chaf1b (ENSLCRG00005013408)	ENSLCRG00005013433	ENSLCRG00005013434	acp6 (ENSLCRG00005013435)	bcl9 (ENSLCRG00005013437)	gja5a (ENSLCRG00005013440)	gja8a (ENSLCRG00005013441)	ENSLCRG00005013442	ENSLCRG00005013443	fstl1b (ENSLCRG00005013445)	LRRC58 (ENSLCRG00005013630)	GPR156 (ENSLCRG00005013632)	gsk3bb (ENSLCRG00005013639) ##22	nr1i2 (ENSLCRG00005014835)	CFAP91 (ENSLCRG00005014969)	ENSLCRG00005014970	ENSLCRG00005014972	ENSLCRG00005014973	zgc:113337 (ENSLCRG00005014975)	GPR89B (ENSLCRG00005014976)	pdzk1 (ENSLCRG00005015322)	ENSLCRG00005015324	ENSLCRG00005015326	NALF1 (ENSLCRG00005015327)	abhd13 (ENSLCRG00005015329)	tnfsf13b (ENSLCRG00005015330)	MYO16 (ENSLCRG00005015332)	IRS2 (ENSLCRG00005015343)
Protacanthopterygii	ANCESTRAL SPECIES	109	ENSGT00940000166160.ab	ENSGT00550000074968	ENSGT00900000141090.t	ENSGT00730000110915.b	ENSGT00940000158408	ENSGT01050000244864.C.e	ENSGT01050000244864.D	ENSGT00940000157784.c.d	ENSGT00940000156556.h	ENSGT00520000055635.c.a.a.a ##22	ENSGT00940000164822.db	ENSGT00940000157784.c.c	ENSGT00940000156556.g	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000159755	ENSGT00520000055635.c.a.b ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000175333	ENSGT00940000164706.b	ENSGT00390000000684	ENSGT00950000182849.A.f.b	ENSGT01100000263563.c.a.a	ENSGT00940000155696.tb	ENSGT00940000158114	ENSGT00940000157536.a.a	ENSGT00940000158920	ENSGT00940000161407.a	ENSGT00940000157678	ENSGT00940000168406	ENSGT00940000178299
Salmoninae	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a.b ##22
Chinook salmon	MODERN SPECIES	22	nhlh2 (ENSOTSG00005000445)	vangl1 (ENSOTSG00005000446)	casq2 (ENSOTSG00005000448)	KCNE2 (ENSOTSG00005000451)	SLC5A3 (ENSOTSG00005000452)	atp5po (ENSOTSG00005000453)	ENSOTSG00005000455	DOP1B (ENSOTSG00005000456)	morc3a (ENSOTSG00005000460)	chaf1b (ENSOTSG00005000462)	ENSOTSG00005000464	BCL9 (ENSOTSG00005000465)	acp6 (ENSOTSG00005000468)	gja5a (ENSOTSG00005000470)	gja8a (ENSOTSG00005000472)	ENSOTSG00005000475 ##22	ENSOTSG00005000474 ##22	nr1i2 (ENSOTSG00005000476)	ENSOTSG00005000479	ENSOTSG00005000487	zgc:113337 (ENSOTSG00005000493)	GPR89B (ENSOTSG00005000500)	pdzk1 (ENSOTSG00005000523)	ENSOTSG00005000528	NALF1 (ENSOTSG00005000532)	abhd13 (ENSOTSG00005000537)	ENSOTSG00005000541	ENSOTSG00005000545	jade1 (ENSOTSG00005000552)	nsd2 (ENSOTSG00005000633)	letm1 (ENSOTSG00005000653)
Northern pike	MODERN SPECIES	15	SLC5A3 (ENSELUG00000005045)	atp5po (ENSELUG00000005034)	ENSELUG00000004944	chaf1b (ENSELUG00000001542)	ENSELUG00000004908	BCL9 (ENSELUG00000004887)	acp6 (ENSELUG00000004869)	gja5a (ENSELUG00000004857)	gja8a (ENSELUG00000004848)	ENSELUG00000004812	ENSELUG00000026943	ENSELUG00000004834	fstl1b (ENSELUG00000004714)	LRRC58 (ENSELUG00000004704)	GPR156 (ENSELUG00000004697)	ENSELUG00000004676 ##22	nr1i2 (ENSELUG00000004648)	CFAP91 (ENSELUG00000004627)	ENSELUG00000004571	zgc:113337 (ENSELUG00000004560)	GPR89B (ENSELUG00000004531)	pdzk1 (ENSELUG00000004499)	CCKBR (ENSELUG00000004477)	NALF1 (ENSELUG00000004463)	abhd13 (ENSELUG00000004460)	tnfsf13b (ENSELUG00000004450)	MYO16 (ENSELUG00000004440)	IRS2 (ENSELUG00000004409)	COL4A1 (ENSELUG00000004344)	ENSELUG00000004234	ENSELUG00000026538
Sarcopterygii	ANCESTRAL SPECIES	45	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00390000012981	ENSGT00390000018386	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00910000148102	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000155444	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693	ENSGT00940000153859.a	ENSGT00940000156336	ENSGT00940000158856	ENSGT00940000157498	ENSGT00940000157300
Coelacanth	MODERN SPECIES	448								ENSLACG00000016840	GTF2E1 (ENSLACG00000015376)	RABL3 (ENSLACG00000015243)	HGD (ENSLACG00000015038)	NDUFB4 (ENSLACG00000015014)	FSTL1 (ENSLACG00000014450)	LRRC58 (ENSLACG00000014141)	GPR156 (ENSLACG00000013479)	GSK3B (ENSLACG00000011303) ##22	NR1I2 (ENSLACG00000010334)	NAA50 (ENSLACG00000009446)	ATP6V1A (ENSLACG00000008629)	QTRT2 (ENSLACG00000008339)	CCDC191 (ENSLACG00000007613)	ZDHHC23 (ENSLACG00000006836)	ENSLACG00000005632	GRAMD1C (ENSLACG00000004958)	ENSLACG00000003131	ENSLACG00000001994
Tetrapoda	ANCESTRAL SPECIES	64	ENSGT00390000011053	ENSGT00640000091497.a	ENSGT01050000244950.a.a.a	ENSGT00390000012981	ENSGT00390000018386	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000155444	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693	ENSGT00940000153859.a	ENSGT00940000156336	ENSGT00940000158856	ENSGT00940000157498	ENSGT00940000157300
Anura	ANCESTRAL SPECIES	148													ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000155444	ENSGT00390000018717.b.a.b	ENSGT00940000153724.A	ENSGT00940000159013	ENSGT00390000013693	ENSGT00940000153859.a	ENSGT00940000156336	ENSGT00940000158856	ENSGT00940000157498	ENSGT01050000244950.a.a.a
Frog	MODERN SPECIES	2	pdxk (ENSXETG00000038974)	agpat3 (ENSXETG00000044392)	trappc10 (ENSXETG00000018000)	pwp2 (ENSXETG00000047683)	ENSXETG00000044125	ENSXETG00000044998	XB5894678 [provisional:btnl10] (ENSXETG00000046927)	vtcn1 (ENSXETG00000039560)	ENSXETG00000041646	ENSXETG00000018007	ENSXETG00000045978	fstl1 (ENSXETG00000042356)	lrrc58 (ENSXETG00000045906)	gpr156 (ENSXETG00000035001)	pla1a (ENSXETG00000045043)	gsk3b (ENSXETG00000047929) ##22	ENSXETG00000048690	nr1i2 (ENSXETG00000018029)	cfap91 (ENSXETG00000018054)	cox17 (ENSXETG00000027716)	popdc2 (ENSXETG00000041522)	hsd3b1 (ENSXETG00000044959)	hao2 (ENSXETG00000018082)	wars2 (ENSXETG00000046032)	tbx15 (ENSXETG00000032807)	spag17 (ENSXETG00000020893)	ENSXETG00000045391	cstb (ENSXETG00000043956)	casr (ENSXETG00000011400)	ENSXETG00000046533	boc (ENSXETG00000012171)
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	294																ENSLLEG00000022090 ##22
Leishan spiny toad	MODERN SPECIES	5	TENT5C (ENSLLEG00000009989)	ENSLLEG00000009977	ENSLLEG00000009955	ENSLLEG00000009907	ENSLLEG00000009843	MIX23 (ENSLLEG00000009458)	FBXO40 (ENSLLEG00000009374)	ENSLLEG00000009256	NDC80 (ENSLLEG00000009117)	ENSLLEG00000009095	TAF13 (ENSLLEG00000009011)	GPR156 (ENSLLEG00000008890)	ENSLLEG00000008873	ENSLLEG00000008864	ENSLLEG00000008843	GSK3B (ENSLLEG00000008511) ##22	ENSLLEG00000008439	NR1I2 (ENSLLEG00000008086)	ENSLLEG00000008022	POPDC2 (ENSLLEG00000008006)	PLA1A (ENSLLEG00000007968)	ENSLLEG00000007945	ENSLLEG00000007931	ENSLLEG00000007918	HAO2 (ENSLLEG00000007848)	WARS2 (ENSLLEG00000007811)	TBX15 (ENSLLEG00000007759)	ENSLLEG00000007714	NDUFB4 (ENSLLEG00000007689)	HGD (ENSLLEG00000007533)	RABL3 (ENSLLEG00000007450)
Amniota	ANCESTRAL SPECIES	54	ENSGT00390000011053	ENSGT00940000154826	ENSGT00940000155717	ENSGT00940000157596	ENSGT00940000161500	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT01030000234540.E	ENSGT00940000158367	ENSGT00940000161722	ENSGT00940000155177.a	ENSGT00940000155177.b	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364
Sauria	ANCESTRAL SPECIES	2	ENSGT00390000010091.d	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Archelosauria	ANCESTRAL SPECIES	30	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284
Cryptodira	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Chinese turtle	MODERN SPECIES	1836	USF3 (ENSPSIG00000001992)	SIDT1 (ENSPSIG00000016194)	SPICE1 (ENSPSIG00000016042)	ENSPSIG00000015817	TRIM45 (ENSPSIG00000015385)	ENSPSIG00000014847	METTL16 (ENSPSIG00000014760)	POLQ (ENSPSIG00000013657)	STXBP5L (ENSPSIG00000012718)	GTF2E1 (ENSPSIG00000012408)	RABL3 (ENSPSIG00000011358)	HGD (ENSPSIG00000011020)	FSTL1 (ENSPSIG00000010391)	LRRC58 (ENSPSIG00000010373)	GPR156 (ENSPSIG00000010275)	GSK3B (ENSPSIG00000008971) ##22	CFAP91 (ENSPSIG00000008161)	ENSPSIG00000001991	POPDC2 (ENSPSIG00000007812)	PLA1A (ENSPSIG00000006753)	ATP1A1 (ENSPSIG00000016388)	MAB21L3 (ENSPSIG00000016310)	SLC22A15 (ENSPSIG00000016056)	CASQ2 (ENSPSIG00000014323)	CHD1L (ENSPSIG00000012595)	ENSPSIG00000011910	TMEM39A (ENSPSIG00000011628)
Testudinoidea	ANCESTRAL SPECIES	1	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.hc.a	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Emydidae	ANCESTRAL SPECIES	36	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300.h	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.hc.a	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT01040000242649	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01030000235556	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284
painted turtle	MODERN SPECIES		SIDT1 (ENSCPBG00000001602)	SPICE1 (ENSCPBG00000001701)	TRIM45 (ENSCPBG00000001736)	ENSCPBG00000001770	ENSCPBG00000001790	METTL16 (ENSCPBG00000001812)	POLQ (ENSCPBG00000001827)	STXBP5L (ENSCPBG00000001879)	GTF2E1 (ENSCPBG00000001978)	RABL3 (ENSCPBG00000001999)	HGD (ENSCPBG00000002015)	NDUFB4 (ENSCPBG00000002050)	FSTL1 (ENSCPBG00000002072)	LRRC58 (ENSCPBG00000002101)	GPR156 (ENSCPBG00000002112)	GSK3B (ENSCPBG00000002148) ##22	CFAP91 (ENSCPBG00000002188)	ENSCPBG00000002241	POPDC2 (ENSCPBG00000002262)	PLA1A (ENSCPBG00000002278)	ENSCPBG00000002355	ATP1A1 (ENSCPBG00000002472)	ENSCPBG00000002478	MAB21L3 (ENSCPBG00000002492)	SLC22A15 (ENSCPBG00000002507)	NHLH2 (ENSCPBG00000002535)	CASQ2 (ENSCPBG00000002545)	VANGL1 (ENSCPBG00000002571)	CHD1L (ENSCPBG00000002600)	ENSCPBG00000002639	TMEM39A (ENSCPBG00000002656)
Three-toed box turtle	MODERN SPECIES	114	VTCN1 (ENSTMTG00000017337)	ENSTMTG00000017347	ENSTMTG00000017376	METTL16 (ENSTMTG00000017395)	ENSTMTG00000017417	ENSTMTG00000003253	ENSTMTG00000003296	STXBP5L (ENSTMTG00000003340)	GTF2E1 (ENSTMTG00000003414)	RABL3 (ENSTMTG00000003439)	HGD (ENSTMTG00000003464)	NDUFB4 (ENSTMTG00000003518)	FSTL1 (ENSTMTG00000003539)	LRRC58 (ENSTMTG00000003570)	GPR156 (ENSTMTG00000003580)	GSK3B (ENSTMTG00000003614) ##22	CFAP91 (ENSTMTG00000003678)	ENSTMTG00000003808	ENSTMTG00000003818	ENSTMTG00000003833	ENSTMTG00000003847	COX17 (ENSTMTG00000003860)	POPDC2 (ENSTMTG00000003880)	PLA1A (ENSTMTG00000004015)	ATP1A1 (ENSTMTG00000004043)	ENSTMTG00000004093	MAB21L3 (ENSTMTG00000004115)	SLC22A15 (ENSTMTG00000004132)	NHLH2 (ENSTMTG00000004165)	CASQ2 (ENSTMTG00000004186)	VANGL1 (ENSTMTG00000004331)
Testudinidae	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.hc.a	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Abingdon island giant tortoise	MODERN SPECIES	2119													FSTL1 (ENSCABG00000018380)	LRRC58 (ENSCABG00000018383)	GPR156 (ENSCABG00000018384)	GSK3B (ENSCABG00000018385) ##22	CFAP91 (ENSCABG00000018389)	COX17 (ENSCABG00000018404)	POPDC2 (ENSCABG00000018409)	PLA1A (ENSCABG00000018418)	ENSCABG00000018421	ATP1A1 (ENSCABG00000018458)	MAB21L3 (ENSCABG00000018693)	ENSCABG00000018695	ENSCABG00000018696	NHLH2 (ENSCABG00000018697)	CASQ2 (ENSCABG00000018699)	VANGL1 (ENSCABG00000018702)
Goode s thornscrub tortoise	MODERN SPECIES		ENSGEVG00005002203	ENSGEVG00005002171	ENSGEVG00005002103	ENSGEVG00005002090	ENSGEVG00005002081	POLQ (ENSGEVG00005001854)	STXBP5L (ENSGEVG00005001567)	GTF2E1 (ENSGEVG00005001467)	RABL3 (ENSGEVG00005001440)	HGD (ENSGEVG00005001401)	NDUFB4 (ENSGEVG00005001388)	ENSGEVG00005001314	FSTL1 (ENSGEVG00005001285)	LRRC58 (ENSGEVG00005001266)	GPR156 (ENSGEVG00005001247)	GSK3B (ENSGEVG00005001193) ##22	CFAP91 (ENSGEVG00005001084)	ENSGEVG00005001033	COX17 (ENSGEVG00005001021)	POPDC2 (ENSGEVG00005000985)	PLA1A (ENSGEVG00005000951)	ENSGEVG00005000922	ENSGEVG00005000905	ATP1A1 (ENSGEVG00005000870)	MAB21L3 (ENSGEVG00005000850)	SLC22A15 (ENSGEVG00005000829)	NHLH2 (ENSGEVG00005000818)	CASQ2 (ENSGEVG00005000799)	VANGL1 (ENSGEVG00005000739)	CHD1L (ENSGEVG00005000712)	ENSGEVG00005000681
Archosauria	ANCESTRAL SPECIES	2	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Australian saltwater crocodile	MODERN SPECIES	60	TRIM45 (ENSCPRG00005001558)	VTCN1 (ENSCPRG00005001564)	ENSCPRG00005001570	ENSCPRG00005001580	METTL16 (ENSCPRG00005001618)	ENSCPRG00005001623	ENSCPRG00005001626	STXBP5L (ENSCPRG00005001784)	GTF2E1 (ENSCPRG00005003420)	RABL3 (ENSCPRG00005003423)	HGD (ENSCPRG00005003427)	NDUFB4 (ENSCPRG00005003439)	FSTL1 (ENSCPRG00005003453)	LRRC58 (ENSCPRG00005003456)	GPR156 (ENSCPRG00005003458)	GSK3B (ENSCPRG00005003476) ##22	CFAP91 (ENSCPRG00005003491)	ENSCPRG00005003500	POPDC2 (ENSCPRG00005003504)	PLA1A (ENSCPRG00005003510)	ENSCPRG00005003516	ATP1A1 (ENSCPRG00005003542)	MAB21L3 (ENSCPRG00005003561)	SLC22A15 (ENSCPRG00005003580)	NHLH2 (ENSCPRG00005003607)	CASQ2 (ENSCPRG00005003611)	VANGL1 (ENSCPRG00005003618)	CHD1L (ENSCPRG00005003632)	ENSCPRG00005003669	TMEM39A (ENSCPRG00005003687)	B4GALT4 (ENSCPRG00005003694)
Aves	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
African ostrich	MODERN SPECIES	237	USF3 (ENSSCUG00000004765)	SIDT1 (ENSSCUG00000004767)	SPICE1 (ENSSCUG00000004771)	TRIM45 (ENSSCUG00000004774)	VTCN1 (ENSSCUG00000004776)	ENSSCUG00000004778	METTL16 (ENSSCUG00000004781)	POLQ (ENSSCUG00000004802)	STXBP5L (ENSSCUG00000004820)	GTF2E1 (ENSSCUG00000004827)	RABL3 (ENSSCUG00000004828)	HGD (ENSSCUG00000004829)	ENSSCUG00000004831	FSTL1 (ENSSCUG00000004834)	GPR156 (ENSSCUG00000004838)	GSK3B (ENSSCUG00000004842) ##22	CFAP91 (ENSSCUG00000004846)	POPDC2 (ENSSCUG00000004850)	PLA1A (ENSSCUG00000004851)	ENSSCUG00000004854
Neognathae	ANCESTRAL SPECIES	1	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Neognathae_b	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284
Neognathae_c	ANCESTRAL SPECIES	4	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00940000159015	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000158378
Golden eagle	MODERN SPECIES	23	TRIM45 (ENSACCG00020016299)	VTCN1 (ENSACCG00020016304)	ENSACCG00020016310	ENSACCG00020016324	METTL16 (ENSACCG00020016335)	ENSACCG00020016343	ENSACCG00020016348	STXBP5L (ENSACCG00020016362)	GTF2E1 (ENSACCG00020016373)	RABL3 (ENSACCG00020016375)	HGD (ENSACCG00020016380)	NDUFB4 (ENSACCG00020016392)	FSTL1 (ENSACCG00020016401)	LRRC58 (ENSACCG00020000335)	GPR156 (ENSACCG00020000354)	GSK3B (ENSACCG00020000388) ##22	CFAP91 (ENSACCG00020000422)	ENSACCG00020000466	POPDC2 (ENSACCG00020000516)	PLA1A (ENSACCG00020000537)	ENSACCG00020000616	ATP1A1 (ENSACCG00020000664)	MAB21L3 (ENSACCG00020000703)	SLC22A15 (ENSACCG00020000808)	NHLH2 (ENSACCG00020000844)	CASQ2 (ENSACCG00020000868)	VANGL1 (ENSACCG00020000895)	CHD1L (ENSACCG00020001177)	ENSACCG00020001380	TMEM39A (ENSACCG00020001402)	B4GALT4 (ENSACCG00020001427)
Kakapo	MODERN SPECIES	28	USF3 (ENSSHBG00005008118)	SIDT1 (ENSSHBG00005008149)	SPICE1 (ENSSHBG00005008191)	ENSSHBG00005008252	ENSSHBG00005008325	METTL16 (ENSSHBG00005008342)	POLQ (ENSSHBG00005008381)	STXBP5L (ENSSHBG00005008567)	GTF2E1 (ENSSHBG00005008615)	ENSSHBG00005008625	HGD (ENSSHBG00005008640)	NDUFB4 (ENSSHBG00005008648)	FSTL1 (ENSSHBG00005008657)	LRRC58 (ENSSHBG00005008665)	GPR156 (ENSSHBG00005008669)	GSK3B (ENSSHBG00005008680) ##22	CFAP91 (ENSSHBG00005008696)	ENSSHBG00005008706	POPDC2 (ENSSHBG00005008718)	PLA1A (ENSSHBG00005008742)	ENSSHBG00005008756	ENSSHBG00005008790	ENSSHBG00005008803	ENSSHBG00005000738	ENSSHBG00005000749	ENSSHBG00005012457	ENSSHBG00005012472	EPHB6 (ENSSHBG00005012491)	TRPV6 (ENSSHBG00005012533)	ENSSHBG00005012599	ENSSHBG00005012615
Passeriformes	ANCESTRAL SPECIES	1	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284
Great tit	MODERN SPECIES		TRIM45 (ENSPMJG00000010355)	VTCN1 (ENSPMJG00000010356)	ENSPMJG00000010406	ENSPMJG00000010407	METTL16 (ENSPMJG00000010408)	POLQ (ENSPMJG00000010409)	STXBP5L (ENSPMJG00000010500)	GTF2E1 (ENSPMJG00000010522)	RABL3 (ENSPMJG00000010524)	HGD (ENSPMJG00000010526)	ENSPMJG00000010528	FSTL1 (ENSPMJG00000010529)	ENSPMJG00000010530	LRRC58 (ENSPMJG00000010597)	GPR156 (ENSPMJG00000010598)	GSK3B (ENSPMJG00000010600) ##22	CFAP91 (ENSPMJG00000010605)	COX17 (ENSPMJG00000010664)	POPDC2 (ENSPMJG00000010671)	PLA1A (ENSPMJG00000010672)	ENSPMJG00000010675	ATP1A1 (ENSPMJG00000010677)	MAB21L3 (ENSPMJG00000010685)	SLC22A15 (ENSPMJG00000010688)	NHLH2 (ENSPMJG00000010729)	CASQ2 (ENSPMJG00000010731)	VANGL1 (ENSPMJG00000010735)	CHD1L (ENSPMJG00000010736)	ENSPMJG00000010739	TMEM39A (ENSPMJG00000010742)	B4GALT4 (ENSPMJG00000010774)
Passeriformes_d	ANCESTRAL SPECIES	1	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Flycatcher	MODERN SPECIES		SPICE1 (ENSFALG00000005150)	ENSFALG00000005179	ENSFALG00000005196	ENSFALG00000005205	ENSFALG00000005230	ENSFALG00000005249	POLQ (ENSFALG00000005269)	STXBP5L (ENSFALG00000005282)	GTF2E1 (ENSFALG00000005290)	RABL3 (ENSFALG00000005296)	HGD (ENSFALG00000005307)	NDUFB4 (ENSFALG00000005312)	FSTL1 (ENSFALG00000028785)	LRRC58 (ENSFALG00000028920)	GPR156 (ENSFALG00000005333)	GSK3B (ENSFALG00000005346) ##22	CFAP91 (ENSFALG00000005370)	ENSFALG00000005381	POPDC2 (ENSFALG00000023145)	PLA1A (ENSFALG00000005402)	ENSFALG00000026264	ENSFALG00000026092	ENSFALG00000005712	DPT (ENSFALG00000005714)	ATP1B1 (ENSFALG00000027394)	NME7 (ENSFALG00000005744)	BLZF1 (ENSFALG00000005752)	CCDC181 (ENSFALG00000005756)	SLC19A2 (ENSFALG00000005765)	F5 (ENSFALG00000005793)	ATG3 (ENSFALG00000005830)
Passeriformes_g	ANCESTRAL SPECIES	25	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Passeroidea	ANCESTRAL SPECIES	5	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT01030000235556	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Zebra finch	MODERN SPECIES		SPICE1 (ENSTGUG00000013365)	TRIM45 (ENSTGUG00000013366)	VTCN1 (ENSTGUG00000013367)	ENSTGUG00000021656	ENSTGUG00000013369	METTL16 (ENSTGUG00000013370)	POLQ (ENSTGUG00000013371)	STXBP5L (ENSTGUG00000013372)	GTF2E1 (ENSTGUG00000013373)	RABL3 (ENSTGUG00000013374)	HGD (ENSTGUG00000013375)	NDUFB4 (ENSTGUG00000013376)	FSTL1 (ENSTGUG00000013377)	LRRC58 (ENSTGUG00000022807)	GPR156 (ENSTGUG00000013379)	GSK3B (ENSTGUG00000013380) ##22	CFAP91 (ENSTGUG00000013381)	ENSTGUG00000029427	POPDC2 (ENSTGUG00000013383)	PLA1A (ENSTGUG00000013384)	ENSTGUG00000013385	ENSTGUG00000020500	SLC22A15 (ENSTGUG00000013386)	ATP1A1 (ENSTGUG00000020927)	NHLH2 (ENSTGUG00000013389)	CASQ2 (ENSTGUG00000013390)	VANGL1 (ENSTGUG00000013391)	CHD1L (ENSTGUG00000013392)	ENSTGUG00000013393	TMEM39A (ENSTGUG00000013394)	B4GALT4 (ENSTGUG00000013395)
Common canary	MODERN SPECIES	4	SPICE1 (ENSSCAG00000010879)	TRIM45 (ENSSCAG00000010874)	VTCN1 (ENSSCAG00000010871)	ENSSCAG00000010860	ENSSCAG00000010852	METTL16 (ENSSCAG00000010843)	POLQ (ENSSCAG00000010837)	STXBP5L (ENSSCAG00000009968)	GTF2E1 (ENSSCAG00000009784)	RABL3 (ENSSCAG00000009779)	HGD (ENSSCAG00000009770)	NDUFB4 (ENSSCAG00000009763)	FSTL1 (ENSSCAG00000009760)	LRRC58 (ENSSCAG00000009753)	GPR156 (ENSSCAG00000009744)	GSK3B (ENSSCAG00000009741) ##22	CFAP91 (ENSSCAG00000009721)	ENSSCAG00000009708	POPDC2 (ENSSCAG00000009705)	PLA1A (ENSSCAG00000009691)	ENSSCAG00000009682	ENSSCAG00000009678	ATP1A1 (ENSSCAG00000009673)	MAB21L3 (ENSSCAG00000009662)	SLC22A15 (ENSSCAG00000009657)	CASQ2 (ENSSCAG00000009630)	VANGL1 (ENSSCAG00000009621)	CHD1L (ENSSCAG00000009606)	ENSSCAG00000009597	TMEM39A (ENSSCAG00000009590)	B4GALT4 (ENSSCAG00000009577)
Medium ground finch	MODERN SPECIES	23	SPICE1 (ENSGFOG00000000471)	TRIM45 (ENSGFOG00000000463)	VTCN1 (ENSGFOG00000000454)	ENSGFOG00000000440	ENSGFOG00000000432	METTL16 (ENSGFOG00000000395)	POLQ (ENSGFOG00000000207)	STXBP5L (ENSGFOG00000000112)	GTF2E1 (ENSGFOG00000000093)	ENSGFOG00000000090	HGD (ENSGFOG00000000064)	ENSGFOG00000000053	FSTL1 (ENSGFOG00000000047)	LRRC58 (ENSGFOG00000000041)	GPR156 (ENSGFOG00000000036)	GSK3B (ENSGFOG00000000035) ##22	CFAP91 (ENSGFOG00000000032)	ENSGFOG00000000031	POPDC2 (ENSGFOG00000000029)	PLA1A (ENSGFOG00000000028)	ENSGFOG00000002627	ENSGFOG00000002615	ATP1A1 (ENSGFOG00000002575)	MAB21L3 (ENSGFOG00000002563)	SLC22A15 (ENSGFOG00000002542)	CASQ2 (ENSGFOG00000002484)	VANGL1 (ENSGFOG00000002463)	CHD1L (ENSGFOG00000002423)	ENSGFOG00000002391	TMEM39A (ENSGFOG00000002378)	B4GALT4 (ENSGFOG00000002353)
Galloanserae	ANCESTRAL SPECIES	1	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01030000235556	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
Anatidae	ANCESTRAL SPECIES	6	ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000158378
Duck	MODERN SPECIES		TRIM45 (ENSAPLG00000015615)	VTCN1 (ENSAPLG00000015540)	ENSAPLG00000015439	ENSAPLG00000015426	METTL16 (ENSAPLG00000023741)	ENSAPLG00000020074	ENSAPLG00000014869	STXBP5L (ENSAPLG00000014395)	GTF2E1 (ENSAPLG00000006481)	RABL3 (ENSAPLG00000006732)	HGD (ENSAPLG00000006938)	NDUFB4 (ENSAPLG00000017845)	FSTL1 (ENSAPLG00000027059)	LRRC58 (ENSAPLG00000029420)	GPR156 (ENSAPLG00000019941)	GSK3B (ENSAPLG00000007990) ##22	CFAP91 (ENSAPLG00000011017)	ENSAPLG00000011097	POPDC2 (ENSAPLG00000019599)	PLA1A (ENSAPLG00000025714)	ENSAPLG00000011249	ATP1A1 (ENSAPLG00000011285)	MAB21L3 (ENSAPLG00000012622)	SLC22A15 (ENSAPLG00000012634)	NHLH2 (ENSAPLG00000023891)	CASQ2 (ENSAPLG00000011267)	VANGL1 (ENSAPLG00000011029)	CHD1L (ENSAPLG00000009976)	ENSAPLG00000009803	TMEM39A (ENSAPLG00000009675)	B4GALT4 (ENSAPLG00000009388)
Pink-footed goose	MODERN SPECIES	5	SPICE1 (ENSABRG00000001117)	TRIM45 (ENSABRG00000000261)	VTCN1 (ENSABRG00000000203)	ENSABRG00000000187	METTL16 (ENSABRG00000014524)	POLQ (ENSABRG00000013954)	STXBP5L (ENSABRG00000010733)	GTF2E1 (ENSABRG00000010408)	RABL3 (ENSABRG00000010395)	HGD (ENSABRG00000010377)	NDUFB4 (ENSABRG00000010370)	FSTL1 (ENSABRG00000010360)	LRRC58 (ENSABRG00000010349)	GPR156 (ENSABRG00000010338)	ENSABRG00000010329	GSK3B (ENSABRG00000010305) ##22	CFAP91 (ENSABRG00000010269)	ENSABRG00000010266	POPDC2 (ENSABRG00000010264)	PLA1A (ENSABRG00000010260)	ENSABRG00000010256	ATP1A1 (ENSABRG00000010220)	SLC22A15 (ENSABRG00000010193)	NHLH2 (ENSABRG00000010180)	CASQ2 (ENSABRG00000010169)	VANGL1 (ENSABRG00000010157)	CHD1L (ENSABRG00000010095)	ENSABRG00000010067	TMEM39A (ENSABRG00000010057)	B4GALT4 (ENSABRG00000010048)	ENSABRG00000010037
Phasianidae	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694.b	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT01030000235556	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000158378
Japanese quail	MODERN SPECIES		SPICE1 (ENSCJPG00005017205)	TRIM45 (ENSCJPG00005017208)	VTCN1 (ENSCJPG00005017294)	ENSCJPG00005017295	ENSCJPG00005017296	METTL16 (ENSCJPG00005017297)	POLQ (ENSCJPG00005017298)	STXBP5L (ENSCJPG00005017353)	GTF2E1 (ENSCJPG00005017354)	RABL3 (ENSCJPG00005017355)	HGD (ENSCJPG00005017356)	NDUFB4 (ENSCJPG00005017357)	FSTL1 (ENSCJPG00005017362)	LRRC58 (ENSCJPG00005017363)	GPR156 (ENSCJPG00005017365)	GSK3B (ENSCJPG00005017366) ##22	CFAP91 (ENSCJPG00005017367)	ENSCJPG00005017368	POPDC2 (ENSCJPG00005017369)	PLA1A (ENSCJPG00005017372)	ATP1A1 (ENSCJPG00005017374)	ENSCJPG00005017379	MAB21L3 (ENSCJPG00005017382)	SLC22A15 (ENSCJPG00005017383)	NHLH2 (ENSCJPG00005017385)	CASQ2 (ENSCJPG00005017386)	VANGL1 (ENSCJPG00005017394)	CHD1L (ENSCJPG00005017397)	ENSCJPG00005017399	TMEM39A (ENSCJPG00005017400)	B4GALT4 (ENSCJPG00005017401)
Phasianidae_b	ANCESTRAL SPECIES		ENSGT00390000006207	ENSGT00940000154334.k	ENSGT00940000157300	ENSGT00390000011553	ENSGT00940000159540	ENSGT00390000016694.b	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT01030000235556	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000158378
Chicken	MODERN SPECIES		SPICE1 (ENSGALG00010022544)	TRIM45 (ENSGALG00010022550)	VTCN1 (ENSGALG00010022564)	ENSGALG00010022625	TNFRSF1A (ENSGALG00010024837)	METTL16 (ENSGALG00010024862)	POLQ (ENSGALG00010024871)	STXBP5L (ENSGALG00010024915)	GTF2E1 (ENSGALG00010024925)	RABL3 (ENSGALG00010024940)	HGD (ENSGALG00010024948)	NDUFB4 (ENSGALG00010024994)	FSTL1 (ENSGALG00010025032)	LRRC58 (ENSGALG00010026272)	GPR156 (ENSGALG00010025060)	GSK3A (ENSGALG00010025103) ##22	CFAP91 (ENSGALG00010025138)	COX17 (ENSGALG00010025147)	POPDC2 (ENSGALG00010025168)	PLA1A (ENSGALG00010025182)	ATP1A1 (ENSGALG00010025292)	ENSGALG00010025350	MAB21L3 (ENSGALG00010025382)	SLC22A15 (ENSGALG00010025400)	NHLH2 (ENSGALG00010025220)	CASQ2 (ENSGALG00010025418)	VANGL1 (ENSGALG00010025428)	CHD1L (ENSGALG00010025448)	ENSGALG00010025465	TMEM39A (ENSGALG00010025481)	B4GALT4 (ENSGALG00010025523)
Turkey	MODERN SPECIES		SIDT1 (ENSMGAG00000014247)	SPICE1 (ENSMGAG00000014252)	ENSMGAG00000014253	ENSMGAG00000014254	ENSMGAG00000014255	ENSMGAG00000014258	ENSMGAG00000021653	POLQ (ENSMGAG00000014264)	STXBP5L (ENSMGAG00000014266)	GTF2E1 (ENSMGAG00000014272)	RABL3 (ENSMGAG00000014276)	HGD (ENSMGAG00000014280)	ENSMGAG00000016069	FSTL1 (ENSMGAG00000014283)	LRRC58 (ENSMGAG00000014285)	GSK3B (ENSMGAG00000014288) ##22	CFAP91 (ENSMGAG00000014289)	ENSMGAG00000014290	POPDC2 (ENSMGAG00000014291)	PLA1A (ENSMGAG00000014293)	ATP1A1 (ENSMGAG00000014297)	MAB21L3 (ENSMGAG00000014300)	SLC22A15 (ENSMGAG00000014301)	CASQ2 (ENSMGAG00000014302)	VANGL1 (ENSMGAG00000014303)	ENSMGAG00000014304	ENSMGAG00000020983	ENSMGAG00000014306	B4GALT4 (ENSMGAG00000014307)	ENSMGAG00000014308	ENSMGAG00000014312
Lepidosauria	ANCESTRAL SPECIES	96					ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00510000049596	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a
tuatara	MODERN SPECIES	1096										GTF2E1 (ENSSPUG00000017495)	RABL3 (ENSSPUG00000017490)	HGD (ENSSPUG00000017347)	ENSSPUG00000017292	FSTL1 (ENSSPUG00000017282)	LRRC58 (ENSSPUG00000017254)	GSK3B (ENSSPUG00000017220) ##22	CFAP91 (ENSSPUG00000017093)	ENSSPUG00000017067	POPDC2 (ENSSPUG00000017054)	PLA1A (ENSSPUG00000017042)	ENSSPUG00000017027	ATP1A1 (ENSSPUG00000016982)	MAB21L3 (ENSSPUG00000016959)	SLC22A15 (ENSSPUG00000016922)	NHLH2 (ENSSPUG00000016906)	CASQ2 (ENSSPUG00000016892)	VANGL1 (ENSSPUG00000016879)	CHD1L (ENSSPUG00000016865)	TMEM39A (ENSSPUG00000016848)	ALG5 (ENSSPUG00000016834)	EXOSC8 (ENSSPUG00000016825)
Episquamata	ANCESTRAL SPECIES	6	ENSGT00390000010091.d	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C
Laterata	ANCESTRAL SPECIES	7	ENSGT00390000010091.d	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C	ENSGT00950000183130.B
Common wall lizard	MODERN SPECIES	8	USF3 (ENSPMRG00000017225)	NAA50 (ENSPMRG00000017218)	ATP6V1A (ENSPMRG00000017201)	ENSPMRG00000017187	ENSPMRG00000017180	POLQ (ENSPMRG00000017034)	STXBP5L (ENSPMRG00000016980)	GTF2E1 (ENSPMRG00000016971)	RABL3 (ENSPMRG00000016963)	HGD (ENSPMRG00000016953)	NDUFB4 (ENSPMRG00000016944)	FSTL1 (ENSPMRG00000016933)	ENSPMRG00000016932	LRRC58 (ENSPMRG00000016931)	GPR156 (ENSPMRG00000016925)	GSK3B (ENSPMRG00000016914) ##22	CFAP91 (ENSPMRG00000016880)	COX17 (ENSPMRG00000016875)	POPDC2 (ENSPMRG00000016870)	PLA1A (ENSPMRG00000016859)	ATP1A1 (ENSPMRG00000016847)	ENSPMRG00000016841	MAB21L3 (ENSPMRG00000016836)	SLC22A15 (ENSPMRG00000016829)	NHLH2 (ENSPMRG00000016824)	ENSPMRG00000023291	ENSPMRG00000023288	VANGL1 (ENSPMRG00000023286)	CHD1L (ENSPMRG00000023281)
Argentine black and white tegu	MODERN SPECIES	45	NAA50 (ENSSMRG00000009591)	ATP6V1A (ENSSMRG00000009588)	ENSSMRG00000009578	ENSSMRG00000009574	ENSSMRG00000009573	ENSSMRG00000009570	POLQ (ENSSMRG00000009566)	STXBP5L (ENSSMRG00000004982)	GTF2E1 (ENSSMRG00000004962)	RABL3 (ENSSMRG00000004953)	HGD (ENSSMRG00000004933)	NDUFB4 (ENSSMRG00000004928)	FSTL1 (ENSSMRG00000004922)	LRRC58 (ENSSMRG00000004920)	ENSSMRG00000004908	GSK3B (ENSSMRG00000004891) ##22	CFAP91 (ENSSMRG00000004857)	POPDC2 (ENSSMRG00000004843)	PLA1A (ENSSMRG00000004830)	ENSSMRG00000004792	ENSSMRG00000004785	PNPLA6 (ENSSMRG00000004764)	ENSSMRG00000004761	SYDE1 (ENSSMRG00000004759)	ILVBL (ENSSMRG00000004757)	S1PR5 (ENSSMRG00000004740)	ATG4D (ENSSMRG00000004737)	ENSSMRG00000004733	KRI1 (ENSSMRG00000004719)	CDKN2D (ENSSMRG00000004717)	AP1M2 (ENSSMRG00000004709)
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000010091.d	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT01050000244827.B	ENSGT00940000160364	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00390000012496.a	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C	ENSGT00950000183130.B
Lizard	MODERN SPECIES	1027					S1PR2 (ENSACAG00000004177)	ENSACAG00000043570	DNMT1 (ENSACAG00000003948)	EIF3G (ENSACAG00000003880)	ENSACAG00000035748	P2RY11 (ENSACAG00000028164)	PPAN (ENSACAG00000003838)	ENSACAG00000003786	ANGPTL6 (ENSACAG00000003753)	ENSACAG00000035757	SHFL (ENSACAG00000003734)	GSK3B (ENSACAG00000003655) ##22	ENSACAG00000027212	CFAP91 (ENSACAG00000003580)	ENSACAG00000026666	POPDC2 (ENSACAG00000003557)	PLA1A (ENSACAG00000003503)	ENSACAG00000037415	ENSACAG00000003402	ENSACAG00000043458
Elapidae	ANCESTRAL SPECIES	28	ENSGT00390000010091.d.e	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024.a	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT00940000160364.j	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00940000159402	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a	ENSGT00530000063860.b
Indian cobra	MODERN SPECIES	1	SIDT1 (ENSNNAG00000009747)	USF3 (ENSNNAG00000009674)	NAA50 (ENSNNAG00000009634)	ATP6V1A (ENSNNAG00000009284)	ENSNNAG00000009235	ENSNNAG00000009199	POLQ (ENSNNAG00000008643)	STXBP5L (ENSNNAG00000007934)	GTF2E1 (ENSNNAG00000007877)	RABL3 (ENSNNAG00000007847)	HGD (ENSNNAG00000007756)	NDUFB4 (ENSNNAG00000007707)	FSTL1 (ENSNNAG00000007651)	LRRC58 (ENSNNAG00000007609)	GPR156 (ENSNNAG00000007531)	GSK3B (ENSNNAG00000007404) ##22	ENSNNAG00000007368	ENSNNAG00000007253	ENSNNAG00000007116	POPDC2 (ENSNNAG00000018864)	PLA1A (ENSNNAG00000018854)	ENSNNAG00000018835	ENSNNAG00000018176	SLC22A15 (ENSNNAG00000017928)	NHLH2 (ENSNNAG00000017926)	CASQ2 (ENSNNAG00000017922)	ENSNNAG00000017918	CHD1L (ENSNNAG00000017899)	TMEM39A (ENSNNAG00000017890)	ALG5 (ENSNNAG00000017889)	EXOSC8 (ENSNNAG00000017886)
Elapidae_a	ANCESTRAL SPECIES	47	ENSGT00390000010091.d.e	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024.a	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT00940000160364.j	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00940000159402.f	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a	ENSGT00530000063860.b
Acanthophiinae	ANCESTRAL SPECIES	44	ENSGT00390000010091.d.e	ENSGT00390000015759	ENSGT00390000009110	ENSGT00550000074787	ENSGT00390000011553	ENSGT00940000159540	ENSGT00940000158694	ENSGT00950000182906.b.b.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00390000003024.a	ENSGT01040000242649	ENSGT00940000164584	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000154840.b	ENSGT00940000160364.j	ENSGT00940000162602	ENSGT00390000019377.b	ENSGT00940000159402.f	ENSGT00940000166284	ENSGT00390000018895.a	ENSGT00940000153481.C	ENSGT00950000183130.B	ENSGT00390000013549.a.a
Eastern brown snake	MODERN SPECIES	59	SIDT1 (ENSPTXG00000014543)	USF3 (ENSPTXG00000014618)	NAA50 (ENSPTXG00000014619)	ATP6V1A (ENSPTXG00000014620)	ENSPTXG00000014621	ENSPTXG00000014625	POLQ (ENSPTXG00000014632)	STXBP5L (ENSPTXG00000014640)	GTF2E1 (ENSPTXG00000014800)	RABL3 (ENSPTXG00000014801)	HGD (ENSPTXG00000014802)	NDUFB4 (ENSPTXG00000014804)	FSTL1 (ENSPTXG00000014805)	LRRC58 (ENSPTXG00000014808)	GPR156 (ENSPTXG00000014809)	GSK3B (ENSPTXG00000014811) ##22	ENSPTXG00000014812	POPDC2 (ENSPTXG00000014813)	PLA1A (ENSPTXG00000014851)	ATP1A1 (ENSPTXG00000014853)	SLC22A15 (ENSPTXG00000014858)	NHLH2 (ENSPTXG00000014861)	CASQ2 (ENSPTXG00000014862)	CHD1L (ENSPTXG00000014866)	ENSPTXG00000014870	TMEM39A (ENSPTXG00000014874)	ALG5 (ENSPTXG00000014877)	EXOSC8 (ENSPTXG00000014882)	SUPT20H (ENSPTXG00000014888)	POSTN (ENSPTXG00000014901)	CARM1 (ENSPTXG00000014915)
Mainland tiger snake	MODERN SPECIES	73	USF3 (ENSNSUG00000019139)	NAA50 (ENSNSUG00000019140)	ATP6V1A (ENSNSUG00000019141)	ENSNSUG00000019142	ENSNSUG00000019143	POLQ (ENSNSUG00000019145)	STXBP5L (ENSNSUG00000019146)	ENSNSUG00000019147	ENSNSUG00000019148	RABL3 (ENSNSUG00000019149)	HGD (ENSNSUG00000019150)	NDUFB4 (ENSNSUG00000019151)	FSTL1 (ENSNSUG00000019152)	LRRC58 (ENSNSUG00000019154)	GPR156 (ENSNSUG00000019155)	GSK3B (ENSNSUG00000019156) ##22	CFAP91 (ENSNSUG00000019157)	ENSNSUG00000019158	POPDC2 (ENSNSUG00000019159)	PLA1A (ENSNSUG00000019160)	ATP1A1 (ENSNSUG00000019161)	SLC22A15 (ENSNSUG00000019336)	NHLH2 (ENSNSUG00000019337)	CASQ2 (ENSNSUG00000019338)	CHD1L (ENSNSUG00000019339)	TMEM39A (ENSNSUG00000019340)	ALG5 (ENSNSUG00000019341)	EXOSC8 (ENSNSUG00000019342)	SUPT20H (ENSNSUG00000019343)	ENSNSUG00000019344	POSTN (ENSNSUG00000019345)
Blue-lipped sea krait	DUPLICATION
Blue-lipped sea krait	MODERN SPECIES	1767																ENSLLTG00000010795 ##22
Blue-lipped sea krait	MODERN SPECIES	5083															ENSLLTG00000007081	ENSLLTG00000007112 ##22
Mammalia	ANCESTRAL SPECIES	69	ENSGT00940000155717	ENSGT00950000185221	ENSGT00940000157596	ENSGT00940000161500	ENSGT00950000183058.A.b	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000012496.a	ENSGT00390000019377.b	ENSGT00940000162602	ENSGT00940000160364	ENSGT01050000244827.B	ENSGT00940000154840.b
Platypus	MODERN SPECIES	7	CASR (ENSOANG00000041729)	ENSOANG00000038962	ENSOANG00000036565	ENSOANG00000044955	FBXO40 (ENSOANG00000037008)	POLQ (ENSOANG00000004437)	STXBP5L (ENSOANG00000004799)	ENSOANG00000039503	RABL3 (ENSOANG00000003928)	HGD (ENSOANG00000003927)	ENSOANG00000005826	NDUFB4 (ENSOANG00000046502)	ENSOANG00000038378	LRRC58 (ENSOANG00000042022)	ENSOANG00000043528	GSK3B (ENSOANG00000001670) ##22	ENSOANG00000050472	ENSOANG00000041372	COX17 (ENSOANG00000037632)	ENSOANG00000048908	PLA1A (ENSOANG00000048291)	ENSOANG00000040539	ADPRH (ENSOANG00000037344)	ENSOANG00000050911	POGLUT1 (ENSOANG00000044666)	VANGL1 (ENSOANG00000042017)	ENSOANG00000021966	NHLH2 (ENSOANG00000009820)	SLC22A15 (ENSOANG00000044054)	MAB21L3 (ENSOANG00000002511)	ATP1A1 (ENSOANG00000037687)
Theria	ANCESTRAL SPECIES	1						ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00730000111007.a.a	ENSGT00390000002188	ENSGT00390000017724.a.b	ENSGT00940000156507.e	ENSGT00940000156507.f.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000158516
Opossum	MODERN SPECIES	3	ENSMODG00000018272	EAF2 (ENSMODG00000018271)	SLC15A2 (ENSMODG00000018269)	ENSMODG00000029412	POLQ (ENSMODG00000018252)	STXBP5L (ENSMODG00000018243)	GTF2E1 (ENSMODG00000018233)	RABL3 (ENSMODG00000018232)	HGD (ENSMODG00000018230)	NDUFB4 (ENSMODG00000051610)	FSTL1 (ENSMODG00000018227)	ENSMODG00000041933	LRRC58 (ENSMODG00000018222)	ENSMODG00000047111	GPR156 (ENSMODG00000018221)	GSK3B (ENSMODG00000018216) ##22	NR1I2 (ENSMODG00000018212)	ENSMODG00000040553	CFAP91 (ENSMODG00000018208)	COX17 (ENSMODG00000049203)	POPDC2 (ENSMODG00000018205)	PLA1A (ENSMODG00000018202)	ADPRH (ENSMODG00000043232)	ENSMODG00000018199	ENSMODG00000018197	POGLUT1 (ENSMODG00000018195)	TMEM39A (ENSMODG00000018192)	ARHGAP31 (ENSMODG00000018191)	B4GALT4 (ENSMODG00000018190)	UPK1B (ENSMODG00000018189)	IGSF11 (ENSMODG00000018186)
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00390000002188	ENSGT00390000017724.a.b	ENSGT00940000156507.e	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000158516
Diprotodontia	ANCESTRAL SPECIES	23	ENSGT00950000183204.a	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00390000002188	ENSGT00390000017724.a.b	ENSGT00940000156507.e	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000158516.c
Diprotodontia_a	ANCESTRAL SPECIES	24	ENSGT00950000183204.a	ENSGT00940000158997	ENSGT00730000111007.a.a	ENSGT00390000002188	ENSGT00390000017724.a.b	ENSGT00940000156507.e	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000156392.a	ENSGT00940000158516.c
koala	MODERN SPECIES	23	IQCB1 (ENSPCIG00000004475)	EAF2 (ENSPCIG00000004463)	SLC15A2 (ENSPCIG00000004444)	ENSPCIG00000004424	ENSPCIG00000028379	STXBP5L (ENSPCIG00000031798)	ENSPCIG00000018915	GTF2E1 (ENSPCIG00000018918)	RABL3 (ENSPCIG00000018922)	HGD (ENSPCIG00000018926)	NDUFB4 (ENSPCIG00000018934)	FSTL1 (ENSPCIG00000018936)	ENSPCIG00000018939	LRRC58 (ENSPCIG00000018940)	GPR156 (ENSPCIG00000006168)	GSK3B (ENSPCIG00000006163) ##22	NR1I2 (ENSPCIG00000006162)	CFAP91 (ENSPCIG00000006160)	COX17 (ENSPCIG00000006151)	POPDC2 (ENSPCIG00000036227)	PLA1A (ENSPCIG00000006144)	ADPRH (ENSPCIG00000032979)	ENSPCIG00000006140	TIMMDC1 (ENSPCIG00000006137)	ENSPCIG00000006131	TMEM39A (ENSPCIG00000006130)	ARHGAP31 (ENSPCIG00000006124)	B4GALT4 (ENSPCIG00000006123)	UPK1B (ENSPCIG00000006120)	ENSPCIG00000031291	IGSF11 (ENSPCIG00000006117)
Common wonbat	MODERN SPECIES	56															GPR156 (ENSVURG00010014986)	GSK3B (ENSVURG00010014968) ##22	ENSVURG00010014891	CFAP91 (ENSVURG00010014850)	ENSVURG00010014838	POPDC2 (ENSVURG00010014829)	ENSVURG00010014812	ENSVURG00010014789	ENSVURG00010014780	POGLUT1 (ENSVURG00010014766)	ENSVURG00010014759	TMEM39A (ENSVURG00010014717)	ARHGAP31 (ENSVURG00010014683)	B4GALT4 (ENSVURG00010014668)	UPK1B (ENSVURG00010014644)	IGSF11 (ENSVURG00010014633)	ENSVURG00010014593
Wallaby	MODERN SPECIES	425																ENSMEUG00000001087 ##22
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000001185	ENSSHAG00000000502 ##13	ENSSHAG00000000655 ##13	ENSSHAG00000004197 ##13	ENSSHAG00000004943 ##13	ENSSHAG00000002483 ##13	ENSSHAG00000005371 ##13	ENSSHAG00000002909 ##13	ENSSHAG00000027528 ##13	ENSSHAG00000027628 #16	ENSSHAG00000023880 #17	ENSSHAG00000030542	ENSSHAG00000030300 #18	ENSSHAG00000021726 #20	PAFAH1B3 (ENSSHAG00000030701) #19	ENSSHAG00000001096 ##22	DEDD2 (ENSSHAG00000002207) #23	ENSSHAG00000020903	ZNF574 (ENSSHAG00000030562) #26	GRIK5 (ENSSHAG00000008541) #27	ATP1A3 (ENSSHAG00000008250) #28	RABAC1 (ENSSHAG00000031670) #29	ENSSHAG00000022230	ERFL (ENSSHAG00000025037) #30	ARHGEF1 (ENSSHAG00000021894) #31	ENSSHAG00000023118	ENSSHAG00000029316	ENSSHAG00000028065	ENSSHAG00000027176 ##13	ENSSHAG00000005369	ENSSHAG00000004961
Tasmanian devil	MODERN SPECIES	2	HCLS1 (ENSSHAG00000010815)	GOLGB1 (ENSSHAG00000010403)	IQCB1 (ENSSHAG00000028307)	EAF2 (ENSSHAG00000009389)	ENSSHAG00000008697	ENSSHAG00000006984	STXBP5L (ENSSHAG00000000906)	GTF2E1 (ENSSHAG00000016161)	RABL3 (ENSSHAG00000012233)	HGD (ENSSHAG00000011807)	ENSSHAG00000026702	FSTL1 (ENSSHAG00000010151)	ENSSHAG00000023019	LRRC58 (ENSSHAG00000025780)	GPR156 (ENSSHAG00000025388)	GSK3B (ENSSHAG00000025881) ##22	NR1I2 (ENSSHAG00000004437)	CFAP91 (ENSSHAG00000002242)	ENSSHAG00000023148	POPDC2 (ENSSHAG00000029644)	PLA1A (ENSSHAG00000000800)	ADPRH (ENSSHAG00000002201)	ENSSHAG00000007496	ENSSHAG00000023989	ENSSHAG00000029705	TMEM39A (ENSSHAG00000029562)	ARHGAP31 (ENSSHAG00000005219)	B4GALT4 (ENSSHAG00000028570)	UPK1B (ENSSHAG00000002740)	IGSF11 (ENSSHAG00000021403)	LSAMP (ENSSHAG00000011640)
Eutheria	ANCESTRAL SPECIES	5	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Atlantogenata	ANCESTRAL SPECIES	19	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Afrotheria	ANCESTRAL SPECIES	17	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Tenrec	MODERN SPECIES	9055																GSK3B (ENSETEG00000009355) ##22
Afrotheria_a	ANCESTRAL SPECIES	16	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Hyrax	MODERN SPECIES	3355																GSK3B (ENSPCAG00000009724) ##22	ENSPCAG00000009674
Elephant	MODERN SPECIES	261	GOLGB1 (ENSLAFG00000014857)	HCLS1 (ENSLAFG00000014847)	FBXO40 (ENSLAFG00000008444)	ARGFX (ENSLAFG00000027648)	POLQ (ENSLAFG00000011574)	ENSLAFG00000028209	STXBP5L (ENSLAFG00000005764)	GTF2E1 (ENSLAFG00000009912)	RABL3 (ENSLAFG00000003711)	HGD (ENSLAFG00000003707)	NDUFB4 (ENSLAFG00000021459)	FSTL1 (ENSLAFG00000017756)	ENSLAFG00000031210	LRRC58 (ENSLAFG00000017752)	GPR156 (ENSLAFG00000013634)	GSK3B (ENSLAFG00000007833) ##22	NR1I2 (ENSLAFG00000007829)	ENSLAFG00000007824	COX17 (ENSLAFG00000006678)	POPDC2 (ENSLAFG00000030586)	PLA1A (ENSLAFG00000006671)	ADPRH (ENSLAFG00000017050)	ENSLAFG00000029338	TIMMDC1 (ENSLAFG00000017337)	POGLUT1 (ENSLAFG00000017330)	ENSLAFG00000027098	TMEM39A (ENSLAFG00000003834)	ARHGAP31 (ENSLAFG00000021413)	B4GALT4 (ENSLAFG00000018497)	UPK1B (ENSLAFG00000011413)	ENSLAFG00000016469
Xenarthra	ANCESTRAL SPECIES	49	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000166921	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Armadillo	MODERN SPECIES	4198	HCLS1 (ENSDNOG00000049207)	FBXO40 (ENSDNOG00000048461)	ARGFX (ENSDNOG00000031231)	ENSDNOG00000048437	POLQ (ENSDNOG00000009810)	STXBP5L (ENSDNOG00000008810)	GTF2E1 (ENSDNOG00000046763)	RABL3 (ENSDNOG00000008174)	HGD (ENSDNOG00000023792)	NDUFB4 (ENSDNOG00000035843)	ENSDNOG00000041310	FSTL1 (ENSDNOG00000038834)	ENSDNOG00000033916	LRRC58 (ENSDNOG00000031178)	GPR156 (ENSDNOG00000036453)	GSK3B (ENSDNOG00000006774) ##22	ENSDNOG00000036421	ENSDNOG00000037850	CFAP91 (ENSDNOG00000011764)	ENSDNOG00000011759	POPDC2 (ENSDNOG00000033287)	PLA1A (ENSDNOG00000043857)	ENSDNOG00000019114	ENSDNOG00000034097	TIMMDC1 (ENSDNOG00000033403)	POGLUT1 (ENSDNOG00000008843)	TMEM39A (ENSDNOG00000008834)	ARHGAP31 (ENSDNOG00000002565)	B4GALT4 (ENSDNOG00000032044)	UPK1B (ENSDNOG00000009549)	ENSDNOG00000025709
Sloth	MODERN SPECIES	8033																GSK3B (ENSCHOG00000012869) ##22
Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Carnivora	ANCESTRAL SPECIES	10	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Caniformia	ANCESTRAL SPECIES		ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Caniformia_b	ANCESTRAL SPECIES		ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00390000018829.f.b	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mustelinae	ANCESTRAL SPECIES	77							ENSGT00950000182906.b.b.a	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Ferret	MODERN SPECIES	337								ENSMPUG00000008239	GTF2E1 (ENSMPUG00000008252)	RABL3 (ENSMPUG00000008257)	HGD (ENSMPUG00000008261)	ENSMPUG00000008272	FSTL1 (ENSMPUG00000008306)	LRRC58 (ENSMPUG00000008319)	GPR156 (ENSMPUG00000008325)	GSK3B (ENSMPUG00000008359) ##22	ENSMPUG00000019118	NR1I2 (ENSMPUG00000008376)	CFAP91 (ENSMPUG00000008388)	POPDC2 (ENSMPUG00000008396)	PLA1A (ENSMPUG00000008415)	CD80 (ENSMPUG00000008424)	TIMMDC1 (ENSMPUG00000008433)	POGLUT1 (ENSMPUG00000008440)	TMEM39A (ENSMPUG00000008445)	SLC23A2 (ENSMPUG00000008540)	RASSF2 (ENSMPUG00000008554)	PRND (ENSMPUG00000019128)	PRNP (ENSMPUG00000019133)	ADRA1D (ENSMPUG00000008569)	SMOX (ENSMPUG00000008586)
American mink	MODERN SPECIES	270							STXBP5L (ENSNVIG00000012143)	GTF2E1 (ENSNVIG00000012079)	RABL3 (ENSNVIG00000012009)	ENSNVIG00000011996	HGD (ENSNVIG00000011936)	NDUFB4 (ENSNVIG00000011919)	FSTL1 (ENSNVIG00000011871)	LRRC58 (ENSNVIG00000011860)	GPR156 (ENSNVIG00000011816)	GSK3B (ENSNVIG00000011704) ##22	NR1I2 (ENSNVIG00000011662)	CFAP91 (ENSNVIG00000011637)	COX17 (ENSNVIG00000011626)	POPDC2 (ENSNVIG00000011589)	PLA1A (ENSNVIG00000011529)	ADPRH (ENSNVIG00000011504)	CD80 (ENSNVIG00000011487)	TIMMDC1 (ENSNVIG00000011444)	PGLT1 (ENSNVIG00000011422)	TMEM39A (ENSNVIG00000011409)	ARHGAP31 (ENSNVIG00000011371)	B4GALT4 (ENSNVIG00000011331)	UPK1B (ENSNVIG00000011317)	ENSNVIG00000011310	IGSF11 (ENSNVIG00000011261)
Ursidae	ANCESTRAL SPECIES	1	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00390000018829.f.b	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Giant Panda	MODERN SPECIES		SLC15A2 (ENSAMEG00000014194)	EAF2 (ENSAMEG00000014180)	IQCB1 (ENSAMEG00000015044)	GOLGB1 (ENSAMEG00000015002)	HCLS1 (ENSAMEG00000014955)	FBXO40 (ENSAMEG00000014952)	POLQ (ENSAMEG00000014870)	STXBP5L (ENSAMEG00000026792)	GTF2E1 (ENSAMEG00000004829)	RABL3 (ENSAMEG00000004809)	HGD (ENSAMEG00000004767)	NDUFB4 (ENSAMEG00000027332)	FSTL1 (ENSAMEG00000006917)	LRRC58 (ENSAMEG00000006946)	GPR156 (ENSAMEG00000006958)	GSK3B (ENSAMEG00000006975) ##22	NR1I2 (ENSAMEG00000007006)	CFAP91 (ENSAMEG00000007087)	COX17 (ENSAMEG00000029657)	POPDC2 (ENSAMEG00000007148)	PLA1A (ENSAMEG00000007170)	ADPRH (ENSAMEG00000027500)	CD80 (ENSAMEG00000007201)	TIMMDC1 (ENSAMEG00000007212)	POGLUT1 (ENSAMEG00000007227)	TMEM39A (ENSAMEG00000007256)	ARHGAP31 (ENSAMEG00000007278)	B4GALT4 (ENSAMEG00000007283)	UPK1B (ENSAMEG00000007300)	ENSAMEG00000026121	IGSF11 (ENSAMEG00000007326)
Ursus	ANCESTRAL SPECIES	44	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00390000018829.f.b	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000154487.A	ENSGT00940000156392.a	ENSGT00940000165328
Polar bear	MODERN SPECIES	313	EAF2 (ENSUMAG00000025232)	IQCB1 (ENSUMAG00000025233)	GOLGB1 (ENSUMAG00000025234)	HCLS1 (ENSUMAG00000025248)	FBXO40 (ENSUMAG00000025249)	ENSUMAG00000025250	POLQ (ENSUMAG00000025251)	STXBP5L (ENSUMAG00000025252)	GTF2E1 (ENSUMAG00000025255)	RABL3 (ENSUMAG00000025256)	HGD (ENSUMAG00000025257)	NDUFB4 (ENSUMAG00000025258)	FSTL1 (ENSUMAG00000025259)	LRRC58 (ENSUMAG00000025261)	GPR156 (ENSUMAG00000025262)	GSK3B (ENSUMAG00000025264) ##22	NR1I2 (ENSUMAG00000025266)	CFAP91 (ENSUMAG00000025267)	COX17 (ENSUMAG00000025268)	POPDC2 (ENSUMAG00000025269)	PLA1A (ENSUMAG00000025270)	ADPRH (ENSUMAG00000025271)	CD80 (ENSUMAG00000025272)	TIMMDC1 (ENSUMAG00000025273)	POGLUT1 (ENSUMAG00000025278)	TMEM39A (ENSUMAG00000025307)	ARHGAP31 (ENSUMAG00000025309)	B4GALT4 (ENSUMAG00000025314)	ENSUMAG00000025317	IGSF11 (ENSUMAG00000025323)	ENSUMAG00000025329
American black bear	MODERN SPECIES	2224																GSK3B (ENSUAMG00000009743) ##22	NR1I2 (ENSUAMG00000009816)	CFAP91 (ENSUAMG00000009817)	COX17 (ENSUAMG00000009818)	POPDC2 (ENSUAMG00000009819)	PLA1A (ENSUAMG00000009820)	ADPRH (ENSUAMG00000009821)	CD80 (ENSUAMG00000009823)
Canidae	ANCESTRAL SPECIES	35	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Canis_lupus	ANCESTRAL SPECIES	31	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Dingo	MODERN SPECIES	65	EAF2 (ENSCAFG00020005884)	IQCB1 (ENSCAFG00020005889)	GOLGB1 (ENSCAFG00020005894)	HCLS1 (ENSCAFG00020005905)	FBXO40 (ENSCAFG00020005920)	POLQ (ENSCAFG00020005928)	STXBP5L (ENSCAFG00020005993)	GTF2E1 (ENSCAFG00020006391)	RABL3 (ENSCAFG00020006397)	HGD (ENSCAFG00020006416)	NDUFB4 (ENSCAFG00020006504)	ENSCAFG00020006505	FSTL1 (ENSCAFG00020006511)	LRRC58 (ENSCAFG00020006515)	GPR156 (ENSCAFG00020006519)	GSK3B (ENSCAFG00020006540) ##22	NR1I2 (ENSCAFG00020006550)	ENSCAFG00020006572	ENSCAFG00020006574	COX17 (ENSCAFG00020006576)	POPDC2 (ENSCAFG00020006583)	PLA1A (ENSCAFG00020006598)	ADPRH (ENSCAFG00020006606)	CD80 (ENSCAFG00020006622)	TIMMDC1 (ENSCAFG00020006611)	POGLUT1 (ENSCAFG00020006629)	TMEM39A (ENSCAFG00020006652)	ARHGAP31 (ENSCAFG00020006669)	B4GALT4 (ENSCAFG00020006771)	UPK1B (ENSCAFG00020006777)	ENSCAFG00020006779
Dog	MODERN SPECIES	26	ILDR1 (ENSCAFG00845022373)	SLC15A2 (ENSCAFG00845022167)	EAF2 (ENSCAFG00845022054)	IQCB1 (ENSCAFG00845021876)	GOLGB1 (ENSCAFG00845021329)	HCLS1 (ENSCAFG00845020698)	FBXO40 (ENSCAFG00845020486)	POLQ (ENSCAFG00845020313)	STXBP5L (ENSCAFG00845019533)	GTF2E1 (ENSCAFG00845019430)	HGD (ENSCAFG00845018928)	NDUFB4 (ENSCAFG00845018723)	FSTL1 (ENSCAFG00845018268)	LRRC58 (ENSCAFG00845018072)	GPR156 (ENSCAFG00845017899)	GSK3B (ENSCAFG00845017754) ##22	NR1I2 (ENSCAFG00845017664)	ENSCAFG00845017584	CFAP91 (ENSCAFG00845017391)	COX17 (ENSCAFG00845017310)	POPDC2 (ENSCAFG00845017206)	PLA1A (ENSCAFG00845017007)	ADPRH (ENSCAFG00845016893)	CD80 (ENSCAFG00845016834)	TIMMDC1 (ENSCAFG00845016705)	ENSCAFG00845016594	TMEM39A (ENSCAFG00845016497)	ARHGAP31 (ENSCAFG00845016365)	B4GALT4 (ENSCAFG00845016279)	UPK1B (ENSCAFG00845016173)	ENSCAFG00845016118
Red fox	MODERN SPECIES	6	HCLS1 (ENSVVUG00000022434)	ENSVVUG00000022430	FBXO40 (ENSVVUG00000022425)	POLQ (ENSVVUG00000022390)	STXBP5L (ENSVVUG00000022321)	GTF2E1 (ENSVVUG00000022305)	RABL3 (ENSVVUG00000022300)	ENSVVUG00000022298	HGD (ENSVVUG00000022291)	NDUFB4 (ENSVVUG00000022287)	ENSVVUG00000022285	ENSVVUG00000022282	FSTL1 (ENSVVUG00000022275)	LRRC58 (ENSVVUG00000022270)	GPR156 (ENSVVUG00000022267)	GSK3B (ENSVVUG00000022258) ##22	NR1I2 (ENSVVUG00000022255)	MAATS1 (ENSVVUG00000022253)	COX17 (ENSVVUG00000022247)	POPDC2 (ENSVVUG00000022245)	PLA1A (ENSVVUG00000022242)	ADPRH (ENSVVUG00000022240)	ENSVVUG00000022239	TIMMDC1 (ENSVVUG00000022235)	POGLUT1 (ENSVVUG00000022232)	TMEM39A (ENSVVUG00000022231)	ARHGAP31 (ENSVVUG00000022225)	B4GALT4 (ENSVVUG00000022224)	UPK1B (ENSVVUG00000022221)	ENSVVUG00000022220	IGSF11 (ENSVVUG00000022218)
Felidae	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Panthera	ANCESTRAL SPECIES	17	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Panthera_a	ANCESTRAL SPECIES	21	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
lion	MODERN SPECIES	9	EAF2 (ENSPLOG00000011045)	IQCB1 (ENSPLOG00000011182)	GOLGB1 (ENSPLOG00000011283)	HCLS1 (ENSPLOG00000011526)	FBXO40 (ENSPLOG00000011625)	POLQ (ENSPLOG00000011699)	STXBP5L (ENSPLOG00000012229)	GTF2E1 (ENSPLOG00000013622)	RABL3 (ENSPLOG00000013672)	ENSPLOG00000013824	HGD (ENSPLOG00000013856)	ENSPLOG00000014040	FSTL1 (ENSPLOG00000014135)	LRRC58 (ENSPLOG00000014323)	GPR156 (ENSPLOG00000014357)	GSK3B (ENSPLOG00000014540) ##22	NR1I2 (ENSPLOG00000014646)	CFAP91 (ENSPLOG00000014979)	COX17 (ENSPLOG00000015215)	POPDC2 (ENSPLOG00000015281)	PLA1A (ENSPLOG00000015433)	ADPRH (ENSPLOG00000015729)	ENSPLOG00000015765	TIMMDC1 (ENSPLOG00000015812)	POGLUT1 (ENSPLOG00000015868)	TMEM39A (ENSPLOG00000016038)	ARHGAP31 (ENSPLOG00000016096)	B4GALT4 (ENSPLOG00000016309)	UPK1B (ENSPLOG00000016371)	ENSPLOG00000016523	IGSF11 (ENSPLOG00000016614)
leopard	MODERN SPECIES	15	SLC15A2 (ENSPPRG00000000860)	EAF2 (ENSPPRG00000001483)	IQCB1 (ENSPPRG00000002414)	GOLGB1 (ENSPPRG00000003483)	HCLS1 (ENSPPRG00000005291)	FBXO40 (ENSPPRG00000005750)	POLQ (ENSPPRG00000007014)	STXBP5L (ENSPPRG00000014151)	GTF2E1 (ENSPPRG00000015486)	RABL3 (ENSPPRG00000016325)	HGD (ENSPPRG00000017055)	ENSPPRG00000017598	FSTL1 (ENSPPRG00000000812)	LRRC58 (ENSPPRG00000000972)	GPR156 (ENSPPRG00000003852)	GSK3B (ENSPPRG00000005066) ##22	NR1I2 (ENSPPRG00000006305)	CFAP91 (ENSPPRG00000007429)	COX17 (ENSPPRG00000007758)	POPDC2 (ENSPPRG00000008619)	PLA1A (ENSPPRG00000010167)	ADPRH (ENSPPRG00000008887)	CD80 (ENSPPRG00000010700)	TIMMDC1 (ENSPPRG00000011180)	POGLUT1 (ENSPPRG00000012384)	TMEM39A (ENSPPRG00000012623)	ARHGAP31 (ENSPPRG00000013169)	B4GALT4 (ENSPPRG00000014440)	UPK1B (ENSPPRG00000015012)	IGSF11 (ENSPPRG00000019104)	ENSPPRG00000020317
Tiger	MODERN SPECIES	584	SLC15A2 (ENSPTIG00000015276)	EAF2 (ENSPTIG00000015608)	IQCB1 (ENSPTIG00000015820)	GOLGB1 (ENSPTIG00000016334)	HCLS1 (ENSPTIG00000016695)	FBXO40 (ENSPTIG00000016859)	POLQ (ENSPTIG00000017074)	STXBP5L (ENSPTIG00000017356)	GTF2E1 (ENSPTIG00000017960)	RABL3 (ENSPTIG00000018021)	HGD (ENSPTIG00000018099)	NDUFB4 (ENSPTIG00000018212)	FSTL1 (ENSPTIG00000018305)	LRRC58 (ENSPTIG00000018937)	GPR156 (ENSPTIG00000018960)	GSK3B (ENSPTIG00000019009) ##22	NR1I2 (ENSPTIG00000019087)	CFAP91 (ENSPTIG00000019203)	COX17 (ENSPTIG00000019444)	POPDC2 (ENSPTIG00000019463)	PLA1A (ENSPTIG00000019651)	CD80 (ENSPTIG00000019881)	TIMMDC1 (ENSPTIG00000019900)	POGLUT1 (ENSPTIG00000001770)	TMEM39A (ENSPTIG00000002678)	ARHGAP31 (ENSPTIG00000003461)	B4GALT4 (ENSPTIG00000004325)	UPK1B (ENSPTIG00000004862)	IGSF11 (ENSPTIG00000005098)
Cat	MODERN SPECIES	240	IQCB1 (ENSFCAG00000024558)	GOLGB1 (ENSFCAG00000025182)	HCLS1 (ENSFCAG00000015524)	FBXO40 (ENSFCAG00000015523)	POLQ (ENSFCAG00000023397)	STXBP5L (ENSFCAG00000015517)	GTF2E1 (ENSFCAG00000029289)	RABL3 (ENSFCAG00000031879)	ENSFCAG00000053064	ENSFCAG00000052566	HGD (ENSFCAG00000031534)	NDUFB4 (ENSFCAG00000024854)	FSTL1 (ENSFCAG00000029075)	LRRC58 (ENSFCAG00000025394)	GPR156 (ENSFCAG00000010273)	GSK3B (ENSFCAG00000040420) ##22	NR1I2 (ENSFCAG00000006092)	CFAP91 (ENSFCAG00000006090)	COX17 (ENSFCAG00000006089)	POPDC2 (ENSFCAG00000006088)	PLA1A (ENSFCAG00000006085)	CD80 (ENSFCAG00000009585)	TIMMDC1 (ENSFCAG00000005791)	POGLUT1 (ENSFCAG00000026293)	TMEM39A (ENSFCAG00000022453)	ARHGAP31 (ENSFCAG00000023924)	B4GALT4 (ENSFCAG00000008000)	UPK1B (ENSFCAG00000026484)	ENSFCAG00000039712	IGSF11 (ENSFCAG00000029999)	ENSFCAG00000033839
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Equus	ANCESTRAL SPECIES	19	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036.f	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Horse	MODERN SPECIES	10	FBXO40 (ENSECAG00000013546)	POLQ (ENSECAG00000014314)	STXBP5L (ENSECAG00000010725)	ENSECAG00000055088	ENSECAG00000057906	ENSECAG00000045072	GTF2E1 (ENSECAG00000020441)	RABL3 (ENSECAG00000023059)	ENSECAG00000040980	HGD (ENSECAG00000023083)	NDUFB4 (ENSECAG00000015610)	FSTL1 (ENSECAG00000017891)	ENSECAG00000028122	LRRC58 (ENSECAG00000000010)	GPR156 (ENSECAG00000024669)	GSK3B (ENSECAG00000024935) ##22	NR1I2 (ENSECAG00000008728)	CFAP91 (ENSECAG00000016423)	POPDC2 (ENSECAG00000021468)	PLA1A (ENSECAG00000054414)	ADPRH (ENSECAG00000023958)	CD80 (ENSECAG00000002211)	TIMMDC1 (ENSECAG00000005889)	POGLUT1 (ENSECAG00000010757)	TMEM39A (ENSECAG00000020653)	ARHGAP31 (ENSECAG00000007228)	B4GALT4 (ENSECAG00000013334)	UPK1B (ENSECAG00000019042)	ENSECAG00000030177	IGSF11 (ENSECAG00000010048)	LSAMP (ENSECAG00000012530)
Donkey	MODERN SPECIES	25	EAF2 (ENSEASG00005015156)	IQCB1 (ENSEASG00005015142)	ENSEASG00005029374	HCLS1 (ENSEASG00005014348)	FBXO40 (ENSEASG00005014328)	POLQ (ENSEASG00005014326)	STXBP5L (ENSEASG00005012678)	GTF2E1 (ENSEASG00005012545)	RABL3 (ENSEASG00005012543)	ENSEASG00005037141	HGD (ENSEASG00005012531)	NDUFB4 (ENSEASG00005033589)	FSTL1 (ENSEASG00005012526)	LRRC58 (ENSEASG00005028750)	GPR156 (ENSEASG00005012520)	GSK3B (ENSEASG00005012514) ##22	NR1I2 (ENSEASG00005012507)	CFAP91 (ENSEASG00005012500)	COX17 (ENSEASG00005038393)	POPDC2 (ENSEASG00005012496)	PLA1A (ENSEASG00005012493)	ADPRH (ENSEASG00005012490)	CD80 (ENSEASG00005012487)	TIMMDC1 (ENSEASG00005035896)	POGLUT1 (ENSEASG00005012484)	TMEM39A (ENSEASG00005012483)	ARHGAP31 (ENSEASG00005012480)	B4GALT4 (ENSEASG00005012476)	UPK1B (ENSEASG00005012465)	ENSEASG00005012462	IGSF11 (ENSEASG00005012458)
Chiroptera	ANCESTRAL SPECIES	13	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Microchiroptera	ANCESTRAL SPECIES	11	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Microbat	MODERN SPECIES	1021	EAF2 (ENSMLUG00000027320)	IQCB1 (ENSMLUG00000015293)	GOLGB1 (ENSMLUG00000024533)	HCLS1 (ENSMLUG00000007751)	FBXO40 (ENSMLUG00000007745)	ENSMLUG00000011532	POLQ (ENSMLUG00000007687)	STXBP5L (ENSMLUG00000017088)	GTF2E1 (ENSMLUG00000008821)	RABL3 (ENSMLUG00000014113)	HGD (ENSMLUG00000014106)	NDUFB4 (ENSMLUG00000027951)	FSTL1 (ENSMLUG00000008852)	LRRC58 (ENSMLUG00000016088)	GPR156 (ENSMLUG00000009359)	GSK3B (ENSMLUG00000002885) ##22	NR1I2 (ENSMLUG00000002877)	CFAP91 (ENSMLUG00000000045)	COX17 (ENSMLUG00000008085)	POPDC2 (ENSMLUG00000008070)	ENSMLUG00000009708	PLA1A (ENSMLUG00000008041)	ENSMLUG00000008028	CD80 (ENSMLUG00000022184)	TIMMDC1 (ENSMLUG00000008020)	POGLUT1 (ENSMLUG00000008002)	TMEM39A (ENSMLUG00000011965)	ARHGAP31 (ENSMLUG00000011937)	B4GALT4 (ENSMLUG00000011924)	UPK1B (ENSMLUG00000002629)	ENSMLUG00000011909
Greater horseshoe bat	MODERN SPECIES	11	SLC15A2 (ENSRFEG00010003208)	EAF2 (ENSRFEG00010003167)	IQCB1 (ENSRFEG00010003132)	GOLGB1 (ENSRFEG00010003020)	HCLS1 (ENSRFEG00010002892)	FBXO40 (ENSRFEG00010002843)	POLQ (ENSRFEG00010002788)	STXBP5L (ENSRFEG00010002716)	GTF2E1 (ENSRFEG00010002637)	RABL3 (ENSRFEG00010002592)	HGD (ENSRFEG00010002548)	ENSRFEG00010002517	FSTL1 (ENSRFEG00010002472)	LRRC58 (ENSRFEG00010002442)	GPR156 (ENSRFEG00010002420)	GSK3B (ENSRFEG00010002338) ##22	NR1I2 (ENSRFEG00010002273)	CFAP91 (ENSRFEG00010002249)	ENSRFEG00010002225	POPDC2 (ENSRFEG00010002211)	PLA1A (ENSRFEG00010002179)	ADPRH (ENSRFEG00010002140)	CD80 (ENSRFEG00010002124)	ENSRFEG00010002108	ENSRFEG00010002094	TIMMDC1 (ENSRFEG00010002072)	POGLUT1 (ENSRFEG00010002048)	TMEM39A (ENSRFEG00010002032)	ARHGAP31 (ENSRFEG00010002013)	B4GALT4 (ENSRFEG00010001981)	UPK1B (ENSRFEG00010001921)
Megabat	MODERN SPECIES	1805															GPR156 (ENSPVAG00000000886)	GSK3B (ENSPVAG00000000885) ##22	NR1I2 (ENSPVAG00000000884)	CFAP91 (ENSPVAG00000000883)	COX17 (ENSPVAG00000000882)	ENSPVAG00000000881	PLA1A (ENSPVAG00000000880)	ADPRH (ENSPVAG00000000879)	CD80 (ENSPVAG00000000878)	TIMMDC1 (ENSPVAG00000000877)	POGLUT1 (ENSPVAG00000000876)	TMEM39A (ENSPVAG00000000875)	ARHGAP31 (ENSPVAG00000000874)	B4GALT4 (ENSPVAG00000000873)	UPK1B (ENSPVAG00000000871)	ENSPVAG00000000869
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Suina	ANCESTRAL SPECIES	1	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Pig	MODERN SPECIES	4	GOLGB1 (ENSSSCG00000011882)	HCLS1 (ENSSSCG00000011884)	FBXO40 (ENSSSCG00000011885)	ENSSSCG00000035362	POLQ (ENSSSCG00000036613)	STXBP5L (ENSSSCG00000039888)	ENSSSCG00000055930	GTF2E1 (ENSSSCG00000063377)	RABL3 (ENSSSCG00000035258)	HGD (ENSSSCG00000021227)	NDUFB4 (ENSSSCG00000031913)	FSTL1 (ENSSSCG00000039426)	LRRC58 (ENSSSCG00000034616)	ENSSSCG00000059521	GPR156 (ENSSSCG00000011888)	GSK3B (ENSSSCG00000011889) ##22	NR1I2 (ENSSSCG00000011890)	CFAP91 (ENSSSCG00000011892)	COX17 (ENSSSCG00000011893)	POPDC2 (ENSSSCG00000011894)	PLA1A (ENSSSCG00000011895)	ADPRH (ENSSSCG00000011896)	CD80 (ENSSSCG00000011899)	TIMMDC1 (ENSSSCG00000037639)	ENSSSCG00000058360	POGLUT1 (ENSSSCG00000032313)	TMEM39A (ENSSSCG00000011901)	ARHGAP31 (ENSSSCG00000026224)	B4GALT4 (ENSSSCG00000011903)	UPK1B (ENSSSCG00000011904)	ENSSSCG00000011905
Chacoan peccary	MODERN SPECIES	944	EAF2 (ENSCWAG00000021684)	IQCB1 (ENSCWAG00000021689)	GOLGB1 (ENSCWAG00000021695)	ENSCWAG00000021699	FBXO40 (ENSCWAG00000021700)	POLQ (ENSCWAG00000021704)	ENSCWAG00000021711	STXBP5L (ENSCWAG00000011896)	GTF2E1 (ENSCWAG00000014156)	RABL3 (ENSCWAG00000014195)	HGD (ENSCWAG00000014292)	NDUFB4 (ENSCWAG00000014423)	FSTL1 (ENSCWAG00000014472)	LRRC58 (ENSCWAG00000014577)	GPR156 (ENSCWAG00000014620)	GSK3B (ENSCWAG00000014772) ##22	NR1I2 (ENSCWAG00000014829)	CFAP91 (ENSCWAG00000014977)	COX17 (ENSCWAG00000015015)	POPDC2 (ENSCWAG00000015043)	PLA1A (ENSCWAG00000015121)	ADPRH (ENSCWAG00000015398)	CD80 (ENSCWAG00000015425)	TIMMDC1 (ENSCWAG00000015477)	ENSCWAG00000015587	POGLUT1 (ENSCWAG00000015604)	TMEM39A (ENSCWAG00000015643)	ARHGAP31 (ENSCWAG00000015676)	B4GALT4 (ENSCWAG00000015707)	UPK1B (ENSCWAG00000015748)	ENSCWAG00000015863
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cetacea	ANCESTRAL SPECIES	10	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000154399.a.b	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT01010000228776	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000154399.a.b	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT01010000228776	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.q	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT01010000228776	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.q	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT01010000228776	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.q	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT01010000228776	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00390000011666.g	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Narwhal	MODERN SPECIES	297	HCLS1 (ENSMMNG00015005036)	FBXO40 (ENSMMNG00015005024)	POLQ (ENSMMNG00015004975)	STXBP5L (ENSMMNG00015004874)	GTF2E1 (ENSMMNG00015004841)	RABL3 (ENSMMNG00015004833)	HGD (ENSMMNG00015004827)	ENSMMNG00015004823	ENSMMNG00015004821	FSTL1 (ENSMMNG00015004817)	LRRC58 (ENSMMNG00015004813)	GPR156 (ENSMMNG00015011308)	ENSMMNG00015011288	ENSMMNG00015011274	ENSMMNG00015011267	GSK3B (ENSMMNG00015011227) ##22	ENSMMNG00015011207	CFAP91 (ENSMMNG00015011132)	COX17 (ENSMMNG00015011097)	POPDC2 (ENSMMNG00015011073)	PLA1A (ENSMMNG00015011043)	ADPRH (ENSMMNG00015011032)	CD80 (ENSMMNG00015011018)	TIMMDC1 (ENSMMNG00015010992)	POGLUT1 (ENSMMNG00015010971)	TMEM39A (ENSMMNG00015010956)	ARHGAP31 (ENSMMNG00015010940)	ENSMMNG00015010930	B4GALT4 (ENSMMNG00015010913)	UPK1B (ENSMMNG00015010881)	ENSMMNG00015010866
Beluga whale	MODERN SPECIES	111	GOLGB1 (ENSDLEG00000010229)	HCLS1 (ENSDLEG00000010160)	FBXO40 (ENSDLEG00000010124)	POLQ (ENSDLEG00000009816)	STXBP5L (ENSDLEG00000009518)	GTF2E1 (ENSDLEG00000009415)	RABL3 (ENSDLEG00000009391)	HGD (ENSDLEG00000009358)	ENSDLEG00000009345	FSTL1 (ENSDLEG00000009282)	LRRC58 (ENSDLEG00000009270)	GPR156 (ENSDLEG00000009225)	ENSDLEG00000009196	ENSDLEG00000009189	ENSDLEG00000009167	GSK3B (ENSDLEG00000009106) ##22	ENSDLEG00000009059	MAATS1 (ENSDLEG00000008809)	COX17 (ENSDLEG00000008752)	POPDC2 (ENSDLEG00000008716)	ENSDLEG00000008698	ADPRH (ENSDLEG00000008689)	CD80 (ENSDLEG00000008659)	TIMMDC1 (ENSDLEG00000008620)	POGLUT1 (ENSDLEG00000008589)	TMEM39A (ENSDLEG00000008559)	ARHGAP31 (ENSDLEG00000008531)	ENSDLEG00000008505	B4GALT4 (ENSDLEG00000008476)	UPK1B (ENSDLEG00000008444)	CUNH3orf30 (ENSDLEG00000008393)
Vaquita	MODERN SPECIES	15	SLC15A2 (ENSPSNG00000009269)	EAF2 (ENSPSNG00000009409)	IQCB1 (ENSPSNG00000009466)	GOLGB1 (ENSPSNG00000009542)	HCLS1 (ENSPSNG00000009720)	FBXO40 (ENSPSNG00000010016)	POLQ (ENSPSNG00000010089)	STXBP5L (ENSPSNG00000010549)	ENSPSNG00000011986	RABL3 (ENSPSNG00000012142)	HGD (ENSPSNG00000012244)	ENSPSNG00000012398	FSTL1 (ENSPSNG00000012493)	LRRC58 (ENSPSNG00000012569)	GPR156 (ENSPSNG00000012616)	GSK3B (ENSPSNG00000012811) ##22	ENSPSNG00000012868	ENSPSNG00000012914	CFAP91 (ENSPSNG00000013123)	POPDC2 (ENSPSNG00000013229)	PLA1A (ENSPSNG00000013340)	ADPRH (ENSPSNG00000013391)	CD80 (ENSPSNG00000013417)	TIMMDC1 (ENSPSNG00000013534)	POGLUT1 (ENSPSNG00000013656)	TMEM39A (ENSPSNG00000013741)	ARHGAP31 (ENSPSNG00000013800)	ENSPSNG00000013843	ENSPSNG00000013885	UPK1B (ENSPSNG00000013994)	ENSPSNG00000014266
Dolphin	MODERN SPECIES	838									GTF2E1 (ENSTTRG00000016661)	RABL3 (ENSTTRG00000016660)	HGD (ENSTTRG00000016659)	NDUFB4 (ENSTTRG00000016658)	FSTL1 (ENSTTRG00000016656)	LRRC58 (ENSTTRG00000016655)	GPR156 (ENSTTRG00000016653)	GSK3B (ENSTTRG00000016652) ##22	NR1I2 (ENSTTRG00000016650)
Sperm whale	MODERN SPECIES		EAF2 (ENSPCTG00005008161)	IQCB1 (ENSPCTG00005008178)	GOLGB1 (ENSPCTG00005008303)	HCLS1 (ENSPCTG00005008835)	FBXO40 (ENSPCTG00005009108)	POLQ (ENSPCTG00005009193)	STXBP5L (ENSPCTG00005009787)	GTF2E1 (ENSPCTG00005011398)	RABL3 (ENSPCTG00005011446)	HGD (ENSPCTG00005011479)	NDUFB4 (ENSPCTG00005011638)	FSTL1 (ENSPCTG00005000217)	LRRC58 (ENSPCTG00005000235)	ENSPCTG00005000246	GPR156 (ENSPCTG00005000273)	GSK3B (ENSPCTG00005000333) ##22	ENSPCTG00005000356	ENSPCTG00005000375	NR1I2 (ENSPCTG00005000415)	MAATS1 (ENSPCTG00005000475)	COX17 (ENSPCTG00005000524)	POPDC2 (ENSPCTG00005000544)	PLA1A (ENSPCTG00005000562)	CD80 (ENSPCTG00005000604)	TIMMDC1 (ENSPCTG00005000635)	POGLUT1 (ENSPCTG00005000664)	TMEM39A (ENSPCTG00005000687)	ARHGAP31 (ENSPCTG00005000706)	B4GALT4 (ENSPCTG00005000732)	UPK1B (ENSPCTG00005000759)	TEX55 (ENSPCTG00005000780)
Blue whale	MODERN SPECIES	15	GOLGB1 (ENSBMSG00010006250)	HCLS1 (ENSBMSG00010006290)	FBXO40 (ENSBMSG00010006320)	ENSBMSG00010006331	STXBP5L (ENSBMSG00010006447)	GTF2E1 (ENSBMSG00010006848)	RABL3 (ENSBMSG00010000075)	HGD (ENSBMSG00010000092)	ENSBMSG00010000116	ENSBMSG00010000135	ENSBMSG00010000140	FSTL1 (ENSBMSG00010000173)	LRRC58 (ENSBMSG00010000218)	ENSBMSG00010000228	GPR156 (ENSBMSG00010000240)	GSK3B (ENSBMSG00010000277) ##22	ENSBMSG00010000330	NR1I2 (ENSBMSG00010000354)	CFAP91 (ENSBMSG00010000406)	COX17 (ENSBMSG00010000448)	POPDC2 (ENSBMSG00010000468)	PLA1A (ENSBMSG00010000505)	ADPRH (ENSBMSG00010000570)	CD80 (ENSBMSG00010000583)	TIMMDC1 (ENSBMSG00010000604)	POGLUT1 (ENSBMSG00010000630)	TMEM39A (ENSBMSG00010000652)	ARHGAP31 (ENSBMSG00010000696)	B4GALT4 (ENSBMSG00010000721)	UPK1B (ENSBMSG00010000745)	ENSBMSG00010000768
Pecora	ANCESTRAL SPECIES	8	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Percora_a	ANCESTRAL SPECIES	7	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Bovidae	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000156507.c	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329.t	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Rambouillet Sheep	MODERN SPECIES		EAF2 (ENSOARG00020004257)	ENSOARG00020004222	IQCB1 (ENSOARG00020004195)	GOLGB1 (ENSOARG00020004009)	HCLS1 (ENSOARG00020003906)	FBXO40 (ENSOARG00020003874)	ENSOARG00020003858	POLQ (ENSOARG00020003708)	STXBP5L (ENSOARG00020002489)	GTF2E1 (ENSOARG00020002411)	RABL3 (ENSOARG00020002395)	HGD (ENSOARG00020002382)	NDUFB4 (ENSOARG00020002367)	FSTL1 (ENSOARG00020002313)	LRRC58 (ENSOARG00020002291)	GSK3B (ENSOARG00020002145) ##22	NR1I2 (ENSOARG00020002112)	MAATS1 (ENSOARG00020002045)	ENSOARG00020002013	POPDC2 (ENSOARG00020001991)	PLA1A (ENSOARG00020001966)	ADPRH (ENSOARG00020001952)	CD80 (ENSOARG00020001923)	TIMMDC1 (ENSOARG00020001894)	POGLUT1 (ENSOARG00020001870)	TMEM39A (ENSOARG00020001841)	ARHGAP31 (ENSOARG00020001802)	B4GALT4 (ENSOARG00020001783)	ENSOARG00020001778	UPK1B (ENSOARG00020001744)	ENSOARG00020001734
Goat	MODERN SPECIES		EAF2 (ENSCHIG00000026173)	ENSCHIG00000012844	IQCB1 (ENSCHIG00000020033)	ENSCHIG00000027245	HCLS1 (ENSCHIG00000026512)	FBXO40 (ENSCHIG00000015913)	POLQ (ENSCHIG00000013841)	STXBP5L (ENSCHIG00000021826)	GTF2E1 (ENSCHIG00000010996)	RABL3 (ENSCHIG00000017365)	HGD (ENSCHIG00000026560)	NDUFB4 (ENSCHIG00000014038)	FSTL1 (ENSCHIG00000019503)	LRRC58 (ENSCHIG00000025792)	GPR156 (ENSCHIG00000021430)	GSK3B (ENSCHIG00000014577) ##22	NR1I2 (ENSCHIG00000011418)	CFAP91 (ENSCHIG00000019072)	COX17 (ENSCHIG00000026140)	POPDC2 (ENSCHIG00000014963)	PLA1A (ENSCHIG00000012809)	ADPRH (ENSCHIG00000024177)	CD80 (ENSCHIG00000009590)	TIMMDC1 (ENSCHIG00000017385)	POGLUT1 (ENSCHIG00000013075)	TMEM39A (ENSCHIG00000018567)	ARHGAP31 (ENSCHIG00000026776)	B4GALT4 (ENSCHIG00000019995)	UPK1B (ENSCHIG00000025927)	IGSF11 (ENSCHIG00000007634)	ENSCHIG00000009136
Bovinae	ANCESTRAL SPECIES	6	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.ib.a.a	ENSGT00960000190801	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00960000192753	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Bos	ANCESTRAL SPECIES	7	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.ib.a.a	ENSGT00960000190801	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00960000192753	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A
Bos_a	ANCESTRAL SPECIES	5	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.ib.a.a	ENSGT00960000190801	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Wild yak	MODERN SPECIES	1776											ENSBMUG00000026477	FSTL1 (ENSBMUG00000026481)	LRRC58 (ENSBMUG00000026482)	GPR156 (ENSBMUG00000026485)	ENSBMUG00000000078	GSK3B (ENSBMUG00000000149) ##22	NR1I2 (ENSBMUG00000000218)	CFAP91 (ENSBMUG00000000245)	COX17 (ENSBMUG00000000266)	POPDC2 (ENSBMUG00000000292)	PLA1A (ENSBMUG00000000355)	CD80 (ENSBMUG00000000424)	TIMMDC1 (ENSBMUG00000000441)	POGLUT1 (ENSBMUG00000000475)	TMEM39A (ENSBMUG00000000508)	ARHGAP31 (ENSBMUG00000000538)
Domestic yak	MODERN SPECIES		IQCB1 (ENSBGRG00000004390)	GOLGB1 (ENSBGRG00000003446)	HCLS1 (ENSBGRG00000003280)	FBXO40 (ENSBGRG00000003263)	ENSBGRG00000003256	POLQ (ENSBGRG00000002979)	STXBP5L (ENSBGRG00000002895)	GTF2E1 (ENSBGRG00000002850)	RABL3 (ENSBGRG00000002799)	HGD (ENSBGRG00000002735)	ENSBGRG00000002707	ENSBGRG00000002696	FSTL1 (ENSBGRG00000002621)	LRRC58 (ENSBGRG00000002589)	GPR156 (ENSBGRG00000002541)	GSK3B (ENSBGRG00000002466) ##22	NR1I2 (ENSBGRG00000002432)	CFAP91 (ENSBGRG00000002380)	COX17 (ENSBGRG00000002369)	POPDC2 (ENSBGRG00000002360)	PLA1A (ENSBGRG00000002335)	ADPRH (ENSBGRG00000002318)	CD80 (ENSBGRG00000002311)	TIMMDC1 (ENSBGRG00000002286)	POGLUT1 (ENSBGRG00000002270)	TMEM39A (ENSBGRG00000002229)	ARHGAP31 (ENSBGRG00000002180)	B4GALT4 (ENSBGRG00000002166)	UPK1B (ENSBGRG00000002125)	ENSBGRG00000002097	IGSF11 (ENSBGRG00000002060)
Bos_b	ANCESTRAL SPECIES	5	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.ib.a.a	ENSGT00960000190801	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00960000192753	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Hybrid Bos Indicus	MODERN SPECIES		EAF2 (ENSBIXG00005011098)	IQCB1 (ENSBIXG00005000543)	GOLGB1 (ENSBIXG00005011387)	HCLS1 (ENSBIXG00005011592)	FBXO40 (ENSBIXG00005006109)	POLQ (ENSBIXG00005011744)	STXBP5L (ENSBIXG00005011853)	GTF2E1 (ENSBIXG00005011917)	RABL3 (ENSBIXG00005011954)	HGD (ENSBIXG00005007473)	ENSBIXG00005011993	FSTL1 (ENSBIXG00005012192)	LRRC58 (ENSBIXG00005012232)	GPR156 (ENSBIXG00005012249)	ENSBIXG00005012259	GSK3B (ENSBIXG00005005384) ##22	NR1I2 (ENSBIXG00005005385)	ENSBIXG00005000372	ENSBIXG00005012326	CFAP91 (ENSBIXG00005001322)	COX17 (ENSBIXG00005001328)	POPDC2 (ENSBIXG00005001330)	PLA1A (ENSBIXG00005007105)	CD80 (ENSBIXG00005012566)	TIMMDC1 (ENSBIXG00005012598)	POGLUT1 (ENSBIXG00005012634)	TMEM39A (ENSBIXG00005012656)	ARHGAP31 (ENSBIXG00005012706)	UPK1B (ENSBIXG00005012753)	B4GALT4 (ENSBIXG00005012818)	ENSBIXG00005012845
Cow	MODERN SPECIES		EAF2 (ENSBTAG00000013070)	IQCB1 (ENSBTAG00000013069)	GOLGB1 (ENSBTAG00000008862)	HCLS1 (ENSBTAG00000001009)	FBXO40 (ENSBTAG00000014508)	POLQ (ENSBTAG00000001920)	STXBP5L (ENSBTAG00000001918)	GTF2E1 (ENSBTAG00000016848)	RABL3 (ENSBTAG00000015898)	HGD (ENSBTAG00000015895)	NDUFB4 (ENSBTAG00000015892)	ENSBTAG00000048370	FSTL1 (ENSBTAG00000022155)	LRRC58 (ENSBTAG00000033170)	GPR156 (ENSBTAG00000001464)	GSK3B (ENSBTAG00000048057) ##22	NR1I2 (ENSBTAG00000019557)	ENSBTAG00000053648	CFAP91 (ENSBTAG00000001293)	COX17 (ENSBTAG00000002182)	POPDC2 (ENSBTAG00000005604)	ADPRH (ENSBTAG00000009391)	CD80 (ENSBTAG00000018059)	TIMMDC1 (ENSBTAG00000012581)	POGLUT1 (ENSBTAG00000008562)	TMEM39A (ENSBTAG00000000213)	ARHGAP31 (ENSBTAG00000000210)	B4GALT4 (ENSBTAG00000001390)	UPK1B (ENSBTAG00000009014)	TEX55 (ENSBTAG00000014157)	IGSF11 (ENSBTAG00000045704)
American bison	MODERN SPECIES	3132	EAF2 (ENSBBBG00000015210)	IQCB1 (ENSBBBG00000015247)	GOLGB1 (ENSBBBG00000001400)	HCLS1 (ENSBBBG00000001352)	FBXO40 (ENSBBBG00000001339)	POLQ (ENSBBBG00000001292)	STXBP5L (ENSBBBG00000015534)	GTF2E1 (ENSBBBG00000015570)	RABL3 (ENSBBBG00000000791)	HGD (ENSBBBG00000003893)	ENSBBBG00000015609	ENSBBBG00000015613	FSTL1 (ENSBBBG00000003439)	LRRC58 (ENSBBBG00000015618)	GPR156 (ENSBBBG00000003904)	GSK3B (ENSBBBG00000003911) ##22	NR1I2 (ENSBBBG00000015694)	ENSBBBG00000002645	ENSBBBG00000015706	COX17 (ENSBBBG00000015712)	POPDC2 (ENSBBBG00000007609)	PLA1A (ENSBBBG00000015760)	ADPRH (ENSBBBG00000003935)	CD80 (ENSBBBG00000015807)	TIMMDC1 (ENSBBBG00000003936)	POGLUT1 (ENSBBBG00000008329)	TMEM39A (ENSBBBG00000015849)	ARHGAP31 (ENSBBBG00000015863)	B4GALT4 (ENSBBBG00000003953)	UPK1B (ENSBBBG00000015921)	ENSBBBG00000002593
Siberian musk deer	MODERN SPECIES	138	ENSMMSG00000015360	EAF2 (ENSMMSG00000015318)	IQCB1 (ENSMMSG00000015271)	GOLGB1 (ENSMMSG00000015000)	HCLS1 (ENSMMSG00000014862)	FBXO40 (ENSMMSG00000014845)	POLQ (ENSMMSG00000014775)	STXBP5L (ENSMMSG00000013838)	GTF2E1 (ENSMMSG00000013738)	RABL3 (ENSMMSG00000013700)	HGD (ENSMMSG00000013668)	NDUFB4 (ENSMMSG00000013638)	FSTL1 (ENSMMSG00000013565)	LRRC58 (ENSMMSG00000013548)	GPR156 (ENSMMSG00000013492)	GSK3B (ENSMMSG00000013438) ##22	NR1I2 (ENSMMSG00000013379)	CFAP91 (ENSMMSG00000013329)	COX17 (ENSMMSG00000013312)	POPDC2 (ENSMMSG00000013284)	PLA1A (ENSMMSG00000013258)	ADPRH (ENSMMSG00000013236)	CD80 (ENSMMSG00000021325)	TIMMDC1 (ENSMMSG00000021285)	POGLUT1 (ENSMMSG00000021245)	TMEM39A (ENSMMSG00000021212)	ARHGAP31 (ENSMMSG00000021178)	B4GALT4 (ENSMMSG00000021051)	UPK1B (ENSMMSG00000020987)	ENSMMSG00000020941	IGSF11 (ENSMMSG00000020871)
Yarkand deer	MODERN SPECIES	10	IQCB1 (ENSCHYG00000007370)	GOLGB1 (ENSCHYG00000007048)	HCLS1 (ENSCHYG00000006945)	FBXO40 (ENSCHYG00000006909)	ENSCHYG00000006896	POLQ (ENSCHYG00000006699)	STXBP5L (ENSCHYG00000006523)	ENSCHYG00000006478	GTF2E1 (ENSCHYG00000006448)	RABL3 (ENSCHYG00000006369)	HGD (ENSCHYG00000006320)	NDUFB4 (ENSCHYG00000006263)	FSTL1 (ENSCHYG00000006072)	LRRC58 (ENSCHYG00000006018)	GPR156 (ENSCHYG00000005936)	GSK3B (ENSCHYG00000005810) ##22	NR1I2 (ENSCHYG00000005717)	CFAP91 (ENSCHYG00000005544)	COX17 (ENSCHYG00000005511)	POPDC2 (ENSCHYG00000005481)	PLA1A (ENSCHYG00000005275)	ADPRH (ENSCHYG00000005222)	CD80 (ENSCHYG00000005183)	TIMMDC1 (ENSCHYG00000005113)	POGLUT1 (ENSCHYG00000005064)	TMEM39A (ENSCHYG00000005039)	ARHGAP31 (ENSCHYG00000004993)	B4GALT4 (ENSCHYG00000024679)	UPK1B (ENSCHYG00000024625)	ENSCHYG00000024586	IGSF11 (ENSCHYG00000024439)
Camelidae	ANCESTRAL SPECIES		ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Alpaca	MODERN SPECIES	2934	EAF2 (ENSVPAG00000003785)	IQCB1 (ENSVPAG00000003784)	GOLGB1 (ENSVPAG00000003783)	ENSVPAG00000003782	FBXO40 (ENSVPAG00000003781)	ENSVPAG00000003780	POLQ (ENSVPAG00000003779)	STXBP5L (ENSVPAG00000003778)	GTF2E1 (ENSVPAG00000003777)	RABL3 (ENSVPAG00000003776)	HGD (ENSVPAG00000003775)	NDUFB4 (ENSVPAG00000003774)	FSTL1 (ENSVPAG00000003772)	LRRC58 (ENSVPAG00000003771)	GPR156 (ENSVPAG00000003770)	GSK3B (ENSVPAG00000003769) ##22	CFAP91 (ENSVPAG00000003768)	COX17 (ENSVPAG00000003767)	POPDC2 (ENSVPAG00000003766)	PLA1A (ENSVPAG00000003765)	CD80 (ENSVPAG00000003764)	TIMMDC1 (ENSVPAG00000003762)	POGLUT1 (ENSVPAG00000003761)	TMEM39A (ENSVPAG00000003760)	ARHGAP31 (ENSVPAG00000003759)
Arabian camel	MODERN SPECIES		SLC15A2 (ENSCDRG00005007797)	EAF2 (ENSCDRG00005007901)	IQCB1 (ENSCDRG00005008000)	GOLGB1 (ENSCDRG00005008124)	HCLS1 (ENSCDRG00005008645)	FBXO40 (ENSCDRG00005008889)	POLQ (ENSCDRG00005009042)	STXBP5L (ENSCDRG00005009380)	GTF2E1 (ENSCDRG00005009907)	RABL3 (ENSCDRG00005009963)	HGD (ENSCDRG00005010063)	NDUFB4 (ENSCDRG00005010214)	FSTL1 (ENSCDRG00005010316)	LRRC58 (ENSCDRG00005010565)	GPR156 (ENSCDRG00005010598)	GSK3B (ENSCDRG00005010672) ##22	NR1I2 (ENSCDRG00005010792)	CFAP91 (ENSCDRG00005011002)	COX17 (ENSCDRG00005011051)	POPDC2 (ENSCDRG00005011064)	PLA1A (ENSCDRG00005011207)	ADPRH (ENSCDRG00005011426)	CD80 (ENSCDRG00005011472)	TIMMDC1 (ENSCDRG00005011523)	POGLUT1 (ENSCDRG00005011693)	TMEM39A (ENSCDRG00005011763)	ARHGAP31 (ENSCDRG00005011828)	B4GALT4 (ENSCDRG00005011906)	UPK1B (ENSCDRG00005011994)	ENSCDRG00005012085	IGSF11 (ENSCDRG00005012126)
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00520000055635.c.a ##22
Common shrew	MODERN SPECIES	7115																GSK3B (ENSSARG00000010833) ##22
Hedgehog	MODERN SPECIES	9005																GSK3B (ENSEEUG00000008536) ##22
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Tree shrew	MODERN SPECIES	5489																GSK3B (ENSTBEG00000001237) ##22
Glires	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Lagomorpha	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Rabbit	MODERN SPECIES	5	IQCB1 (ENSOCUG00000009145)	GOLGB1 (ENSOCUG00000012457)	HCLS1 (ENSOCUG00000012449)	FBXO40 (ENSOCUG00000012444)	POLQ (ENSOCUG00000008077)	STXBP5L (ENSOCUG00000005835)	GTF2E1 (ENSOCUG00000002784)	HGD (ENSOCUG00000009008)	ENSOCUG00000029140	ENSOCUG00000012731	FSTL1 (ENSOCUG00000005247)	ENSOCUG00000029307	LRRC58 (ENSOCUG00000025190)	ENSOCUG00000026225	GPR156 (ENSOCUG00000006705)	GSK3B (ENSOCUG00000014932) ##22	NR1I2 (ENSOCUG00000006125)	CFAP91 (ENSOCUG00000009467)	COX17 (ENSOCUG00000022295)	POPDC2 (ENSOCUG00000009515)	PLA1A (ENSOCUG00000009512)	ADPRH (ENSOCUG00000009508)	CD80 (ENSOCUG00000009504)	TIMMDC1 (ENSOCUG00000009500)	ENSOCUG00000035322	POGLUT1 (ENSOCUG00000009492)	TMEM39A (ENSOCUG00000009483)	ARHGAP31 (ENSOCUG00000009478)	B4GALT4 (ENSOCUG00000008301)	UPK1B (ENSOCUG00000008294)	ENSOCUG00000007525
Pika	MODERN SPECIES	3976																GSK3B (ENSOPRG00000007434) ##22	CFAP91 (ENSOPRG00000007416)
Rodentia	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Hystricomorpha	ANCESTRAL SPECIES	18	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Hystricomorpha_a	ANCESTRAL SPECIES	36	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Guinea pig	MODERN SPECIES	35	IQCB1 (ENSCPOG00000006419)	GOLGB1 (ENSCPOG00000006405)	HCLS1 (ENSCPOG00000006399)	FBXO40 (ENSCPOG00000013228)	ENSCPOG00000026454	STXBP5L (ENSCPOG00000008283)	GTF2E1 (ENSCPOG00000009651)	ENSCPOG00000022678	RABL3 (ENSCPOG00000009645)	HGD (ENSCPOG00000022275)	NDUFB4 (ENSCPOG00000035194)	FSTL1 (ENSCPOG00000033880)	ENSCPOG00000040381	LRRC58 (ENSCPOG00000007047)	GPR156 (ENSCPOG00000020772)	GSK3B (ENSCPOG00000014311) ##22	NR1I2 (ENSCPOG00000020161)	CFAP91 (ENSCPOG00000015496)	COX17 (ENSCPOG00000035233)	POPDC2 (ENSCPOG00000033804)	PLA1A (ENSCPOG00000006772)	ADPRH (ENSCPOG00000040724)	TIMMDC1 (ENSCPOG00000008796)	POGLUT1 (ENSCPOG00000008792)	TMEM39A (ENSCPOG00000021971)	ARHGAP31 (ENSCPOG00000020153)	B4GALT4 (ENSCPOG00000003761)	UPK1B (ENSCPOG00000003759)	IGSF11 (ENSCPOG00000003209)	ENSCPOG00000025148	LSAMP (ENSCPOG00000015654)
Hystricomorpha_b	ANCESTRAL SPECIES	32	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Degu	MODERN SPECIES	94							GTF2E1 (ENSODEG00000006397)	ENSODEG00000004758	HGD (ENSODEG00000004535)	NDUFB4 (ENSODEG00000004455)	ENSODEG00000005838	FSTL1 (ENSODEG00000004938)	ENSODEG00000004760	LRRC58 (ENSODEG00000005193)	GPR156 (ENSODEG00000004344)	GSK3B (ENSODEG00000004911) ##22	NR1I2 (ENSODEG00000005572)	ENSODEG00000004782	CFAP91 (ENSODEG00000005123)	ENSODEG00000006002	POPDC2 (ENSODEG00000005758)	PLA1A (ENSODEG00000005508)	ADPRH (ENSODEG00000004755)	TIMMDC1 (ENSODEG00000005407)	POGLUT1 (ENSODEG00000005210)	TMEM39A (ENSODEG00000004969)	ARHGAP31 (ENSODEG00000004451)	B4GALT4 (ENSODEG00000005576)	UPK1B (ENSODEG00000005396)	IGSF11 (ENSODEG00000008011)	LSAMP (ENSODEG00000007426)
Long-tailed chinchilla	MODERN SPECIES	134	EAF2 (ENSCLAG00000014487)	IQCB1 (ENSCLAG00000014748)	GOLGB1 (ENSCLAG00000011762)	HCLS1 (ENSCLAG00000013865)	FBXO40 (ENSCLAG00000012408)	POLQ (ENSCLAG00000008388)	STXBP5L (ENSCLAG00000008959)	GTF2E1 (ENSCLAG00000013201)	RABL3 (ENSCLAG00000010855)	HGD (ENSCLAG00000009244)	NDUFB4 (ENSCLAG00000015299)	FSTL1 (ENSCLAG00000009617)	ENSCLAG00000013373	LRRC58 (ENSCLAG00000013874)	GPR156 (ENSCLAG00000011487)	GSK3B (ENSCLAG00000010847) ##22	NR1I2 (ENSCLAG00000012141)	CFAP91 (ENSCLAG00000012737)	COX17 (ENSCLAG00000009645)	POPDC2 (ENSCLAG00000009065)	PLA1A (ENSCLAG00000014856)	ADPRH (ENSCLAG00000011364)	CD80 (ENSCLAG00000011564)	TIMMDC1 (ENSCLAG00000010891)	POGLUT1 (ENSCLAG00000010554)	TMEM39A (ENSCLAG00000014429)	ARHGAP31 (ENSCLAG00000012175)	B4GALT4 (ENSCLAG00000011805)	UPK1B (ENSCLAG00000011285)	ENSCLAG00000012132	IGSF11 (ENSCLAG00000016334)
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000048017	ENSHGLG00000049436	GTF2E1 (ENSHGLG00000014027)	RABL3 (ENSHGLG00000014491)	HGD (ENSHGLG00000011483)	ENSHGLG00000021124	ENSHGLG00000039134	ENSHGLG00000046072	FSTL1 (ENSHGLG00000042537)	ENSHGLG00000016072	ENSHGLG00000039065	ENSHGLG00000047140	ENSHGLG00000012705	ENSHGLG00000011850	GPR156 (ENSHGLG00000016214)	GSK3B (ENSHGLG00000033523) ##22	NR1I2 (ENSHGLG00000011275)	MAATS1 (ENSHGLG00000011972)	POPDC2 (ENSHGLG00000012127)	ENSHGLG00000040011	PLA1A (ENSHGLG00000012437)	ENSHGLG00000011111	CD80 (ENSHGLG00000011229)	TIMMDC1 (ENSHGLG00000012181)	POGLUT1 (ENSHGLG00000037001)	ENSHGLG00000042668	TMEM39A (ENSHGLG00000012973)	ARHGAP31 (ENSHGLG00000012661)	B4GALT4 (ENSHGLG00000013654)	ENSHGLG00000039966	ENSHGLG00000014357
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000164942	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000164942	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Marmotini_b	ANCESTRAL SPECIES	36	ENSGT00940000164942	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.`b	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Arctic ground squirrel	MODERN SPECIES	5	ENSUPAG00010020361	EAF2 (ENSUPAG00010020354)	IQCB1 (ENSUPAG00010020333)	GOLGB1 (ENSUPAG00010020323)	HCLS1 (ENSUPAG00010020307)	FBXO40 (ENSUPAG00010020299)	POLQ (ENSUPAG00010020281)	STXBP5L (ENSUPAG00010020087)	ENSUPAG00010020082	RABL3 (ENSUPAG00010020073)	HGD (ENSUPAG00010020051)	NDUFB4 (ENSUPAG00010020045)	FSTL1 (ENSUPAG00010020040)	LRRC58 (ENSUPAG00010020027)	GPR156 (ENSUPAG00010020021)	GSK3B (ENSUPAG00010020003) ##22	NR1I2 (ENSUPAG00010019993)	CFAP91 (ENSUPAG00010019983)	POPDC2 (ENSUPAG00010019975)	PLA1A (ENSUPAG00010019964)	ADPRH (ENSUPAG00010019959)	ENSUPAG00010019943	TIMMDC1 (ENSUPAG00010019937)	POGLUT1 (ENSUPAG00010019930)	TMEM39A (ENSUPAG00010019923)	ARHGAP31 (ENSUPAG00010019913)	B4GALT4 (ENSUPAG00010019902)	UPK1B (ENSUPAG00010019899)	ENSUPAG00010019891	IGSF11 (ENSUPAG00010019883)	ENSUPAG00010019879
Squirrel	MODERN SPECIES	136	SLC15A2 (ENSSTOG00000010060)	EAF2 (ENSSTOG00000019911)	IQCB1 (ENSSTOG00000010040)	GOLGB1 (ENSSTOG00000010027)	HCLS1 (ENSSTOG00000010016)	FBXO40 (ENSSTOG00000021524)	POLQ (ENSSTOG00000009954)	STXBP5L (ENSSTOG00000009925)	GTF2E1 (ENSSTOG00000015735)	RABL3 (ENSSTOG00000019452)	HGD (ENSSTOG00000015729)	ENSSTOG00000020092	FSTL1 (ENSSTOG00000001471)	LRRC58 (ENSSTOG00000022670)	GPR156 (ENSSTOG00000026101)	GSK3B (ENSSTOG00000014997) ##22	NR1I2 (ENSSTOG00000014988)	CFAP91 (ENSSTOG00000014975)	COX17 (ENSSTOG00000032615)	POPDC2 (ENSSTOG00000023809)	PLA1A (ENSSTOG00000003945)	ADPRH (ENSSTOG00000003926)	POGLUT1 (ENSSTOG00000003881)	ENSSTOG00000003860	ARHGAP31 (ENSSTOG00000021084)	B4GALT4 (ENSSTOG00000027381)	UPK1B (ENSSTOG00000003807)	IGSF11 (ENSSTOG00000003786)	LSAMP (ENSSTOG00000002989)	ENSSTOG00000024146	ENSSTOG00000031138
Alpin marmot	MODERN SPECIES	4															GPR156 (ENSMMMG00000010153)	GSK3B (ENSMMMG00000010178) ##22	NR1I2 (ENSMMMG00000010256)	CFAP91 (ENSMMMG00000010267)	COX17 (ENSMMMG00000010300)	POPDC2 (ENSMMMG00000010311)	PLA1A (ENSMMMG00000010338)	ADPRH (ENSMMMG00000010347)	ENSMMMG00000010352	ENSMMMG00000010385	POGLUT1 (ENSMMMG00000010390)	TMEM39A (ENSMMMG00000010405)	ARHGAP31 (ENSMMMG00000010452)	B4GALT4 (ENSMMMG00000010486)	UPK1B (ENSMMMG00000010514)	ENSMMMG00000010526	IGSF11 (ENSMMMG00000010538)
Eurasian red squirrel	MODERN SPECIES	1	GOLGB1 (ENSSVLG00005005470)	HCLS1 (ENSSVLG00005005312)	FBXO40 (ENSSVLG00005005263)	ENSSVLG00005005253	ENSSVLG00005005232	POLQ (ENSSVLG00005005121)	STXBP5L (ENSSVLG00005004686)	ENSSVLG00005004540	RABL3 (ENSSVLG00005014450)	HGD (ENSSVLG00005014290)	NDUFB4 (ENSSVLG00005014222)	FSTL1 (ENSSVLG00005013992)	LRRC58 (ENSSVLG00005013737)	GPR156 (ENSSVLG00005013678)	ENSSVLG00005013550	GSK3B (ENSSVLG00005013429) ##22	NR1I2 (ENSSVLG00005013118)	CFAP91 (ENSSVLG00005012792)	COX17 (ENSSVLG00005012743)	POPDC2 (ENSSVLG00005012683)	PLA1A (ENSSVLG00005012278)	ADPRH (ENSSVLG00005012211)	CD80 (ENSSVLG00005012179)	TIMMDC1 (ENSSVLG00005012068)	POGLUT1 (ENSSVLG00005012003)	TMEM39A (ENSSVLG00005011954)	ARHGAP31 (ENSSVLG00005011911)	B4GALT4 (ENSSVLG00005011839)	UPK1B (ENSSVLG00005011605)	ENSSVLG00005011540	IGSF11 (ENSSVLG00005011284)
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Muroidea	ANCESTRAL SPECIES	11	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Muroidea_A	ANCESTRAL SPECIES	17	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cricetidae	ANCESTRAL SPECIES	16	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a.h	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.h	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cricetinae	ANCESTRAL SPECIES	10	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a.h	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.h	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Chinese hamster chok1gshd	MODERN SPECIES	382	Iqcb1 (ENSCGRG00001004386)	Golgb1 (ENSCGRG00001012572)	Hcls1 (ENSCGRG00001024176)	Fbxo40 (ENSCGRG00001023973)	Polq (ENSCGRG00001013184)	Stxbp5l (ENSCGRG00001011397)	Gtf2e1 (ENSCGRG00001013030)	Rabl3 (ENSCGRG00001021537)	Hgd (ENSCGRG00001019124)	ENSCGRG00001016366	Fstl1 (ENSCGRG00001019352)	Btnl12 (ENSCGRG00001009585)	Lrrc58 (ENSCGRG00001011907)	Gpr156 (ENSCGRG00001018982)	ENSCGRG00001024473	Gsk3b (ENSCGRG00001011596) ##22	Nr1i2 (ENSCGRG00001015366)	Cfap91 (ENSCGRG00001012643)	Cox17 (ENSCGRG00001015107)	Popdc2 (ENSCGRG00001017962)	Pla1a (ENSCGRG00001004252)	Adprh (ENSCGRG00001000378)	ENSCGRG00001004843	Timmdc1 (ENSCGRG00001024636)	Poglut1 (ENSCGRG00001014022)	Tmem39a (ENSCGRG00001019374)	Arhgap31 (ENSCGRG00001023004)	B4GALT4 (ENSCGRG00001018573)	Upk1b (ENSCGRG00001021427)	Tex55 (ENSCGRG00001010978)	Igsf11 (ENSCGRG00001021078)
Golden Hamster	MODERN SPECIES	645	ENSMAUG00000017415	Eaf2 (ENSMAUG00000019901)	Iqcb1 (ENSMAUG00000005080)	Golgb1 (ENSMAUG00000015772)	ENSMAUG00000014613	ENSMAUG00000015080	Stxbp5l (ENSMAUG00000001984)	Gtf2e1 (ENSMAUG00000020149)	Rabl3 (ENSMAUG00000013022)	Hgd (ENSMAUG00000016960)	Ndufb4 (ENSMAUG00000013448)	Fstl1 (ENSMAUG00000002118)	Btnl12 (ENSMAUG00000010510)	Lrrc58 (ENSMAUG00000014544)	Gpr156 (ENSMAUG00000014863)	Gsk3b (ENSMAUG00000015683) ##22	Nr1i2 (ENSMAUG00000011479)	Cfap91 (ENSMAUG00000008338)	Cox17 (ENSMAUG00000020841)	ENSMAUG00000020930	Pla1a (ENSMAUG00000019375)	Adprh (ENSMAUG00000015401)	Cd80 (ENSMAUG00000019460)	Timmdc1 (ENSMAUG00000016390)	Poglut1 (ENSMAUG00000008352)	Tmem39a (ENSMAUG00000018677)	Arhgap31 (ENSMAUG00000011534)	B4galt4 (ENSMAUG00000019616)	Upk1b (ENSMAUG00000001641)	Tex55 (ENSMAUG00000017779)	Igsf11 (ENSMAUG00000020515)
Cricetidae_B	ANCESTRAL SPECIES	13	ENSGT00390000002188	ENSGT00730000111007.a.a.h	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.h	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Prairie vole	MODERN SPECIES	7	Tmem45a (ENSMOCG00000010510)	Adgrg7 (ENSMOCG00000021146)	ENSMOCG00000013742	ENSMOCG00000022104	Fbxo40 (ENSMOCG00000008639)	Polq (ENSMOCG00000016969)	Stxbp5l (ENSMOCG00000000855)	ENSMOCG00000020694	Rabl3 (ENSMOCG00000015237)	Hgd (ENSMOCG00000002971)	Ndufb4 (ENSMOCG00000017175)	Fstl1 (ENSMOCG00000019386)	Btnl12 (ENSMOCG00000013857)	Lrrc58 (ENSMOCG00000021625)	Gpr156 (ENSMOCG00000011836)	Gsk3b (ENSMOCG00000003748) ##22	Nr1i2 (ENSMOCG00000010007)	Cfap91 (ENSMOCG00000022057)	ENSMOCG00000015088	Popdc2 (ENSMOCG00000001357)	Pla1a (ENSMOCG00000010278)	Adprh (ENSMOCG00000000586)	Cd80 (ENSMOCG00000010251)	Timmdc1 (ENSMOCG00000008932)	Poglut1 (ENSMOCG00000021115)	Tmem39a (ENSMOCG00000003219)	Arhgap31 (ENSMOCG00000018739)	B4galt4 (ENSMOCG00000002081)	Upk1b (ENSMOCG00000000605)	Tex55 (ENSMOCG00000016686)	Igsf11 (ENSMOCG00000016142)
Northern American deer mouse	MODERN SPECIES	3	Eaf2 (ENSPEMG00000023833)	Iqcb1 (ENSPEMG00000007062)	Golgb1 (ENSPEMG00000023907)	Hcls1 (ENSPEMG00000000520)	Fbxo40 (ENSPEMG00000010564)	Polq (ENSPEMG00000017429)	Stxbp5l (ENSPEMG00000004327)	Gtf2e1 (ENSPEMG00000017575)	Rabl3 (ENSPEMG00000016913)	Hgd (ENSPEMG00000011187)	ENSPEMG00000017143	Fstl1 (ENSPEMG00000001577)	Btnl12 (ENSPEMG00000018750)	ENSPEMG00000025730	Gpr156 (ENSPEMG00000010041)	Gsk3b (ENSPEMG00000013248) ##22	Nr1i2 (ENSPEMG00000011080)	Cfap91 (ENSPEMG00000012934)	Cox17 (ENSPEMG00000021484)	Popdc2 (ENSPEMG00000028149)	Pla1a (ENSPEMG00000009814)	Adprh (ENSPEMG00000018441)	Cd80 (ENSPEMG00000008187)	Timmdc1 (ENSPEMG00000013019)	Poglut1 (ENSPEMG00000004205)	Tmem39a (ENSPEMG00000013355)	Arhgap31 (ENSPEMG00000008240)	B4galt4 (ENSPEMG00000017494)	Upk1b (ENSPEMG00000003526)	Tex55 (ENSPEMG00000008982)	Igsf11 (ENSPEMG00000013802)
Murinae	ANCESTRAL SPECIES	13	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mus	ANCESTRAL SPECIES	13	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mus_A	ANCESTRAL SPECIES	18	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.x	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mus_B	ANCESTRAL SPECIES	18	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.x	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mouse	MODERN SPECIES	7	Eaf2 (ENSMUSG00000022838)	Iqcb1 (ENSMUSG00000022837)	Golgb1 (ENSMUSG00000034243)	Hcls1 (ENSMUSG00000022831)	Fbxo40 (ENSMUSG00000047746)	Polq (ENSMUSG00000034206)	Stxbp5l (ENSMUSG00000022829)	Gtf2e1 (ENSMUSG00000022828)	Rabl3 (ENSMUSG00000022827)	Hgd (ENSMUSG00000022821)	Ndufb4 (ENSMUSG00000022820)	Fstl1 (ENSMUSG00000022816)	Btnl12 (ENSMUSG00000108763)	Lrrc58 (ENSMUSG00000034158)	Gpr156 (ENSMUSG00000046961)	Gsk3b (ENSMUSG00000022812) ##22	Nr1i2 (ENSMUSG00000022809)	Cfap91 (ENSMUSG00000022805)	Cox17 (ENSMUSG00000046516)	Popdc2 (ENSMUSG00000022803)	Pla1a (ENSMUSG00000002847)	Adprh (ENSMUSG00000002844)	Cd80 (ENSMUSG00000075122)	Timmdc1 (ENSMUSG00000002846)	Poglut1 (ENSMUSG00000034064)	Tmem39a (ENSMUSG00000002845)	Arhgap31 (ENSMUSG00000022799)	B4galt4 (ENSMUSG00000022793)	Upk1b (ENSMUSG00000049436)	Tex55 (ENSMUSG00000022798)	Igsf11 (ENSMUSG00000022790)
Mus_C	ANCESTRAL SPECIES	12	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.x	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133.h	ENSGT00390000007133.g.b	ENSGT00940000157784	ENSGT00940000163036	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
spretus	MODERN SPECIES	7	Eaf2 (MGP_SPRETEiJ_G0021620)	Iqcb1 (MGP_SPRETEiJ_G0021621)	Golgb1 (MGP_SPRETEiJ_G0021622)	Hcls1 (MGP_SPRETEiJ_G0021623)	Fbxo40 (MGP_SPRETEiJ_G0021624)	Polq (MGP_SPRETEiJ_G0021625)	Stxbp5l (MGP_SPRETEiJ_G0021626)	Gtf2e1 (MGP_SPRETEiJ_G0021627)	Rabl3 (MGP_SPRETEiJ_G0021628)	Hgd (MGP_SPRETEiJ_G0021629)	Ndufb4 (MGP_SPRETEiJ_G0021630)	Fstl1 (MGP_SPRETEiJ_G0021631)	Btnl12 (MGP_SPRETEiJ_G0021632)	Lrrc58 (MGP_SPRETEiJ_G0021633)	Gpr156 (MGP_SPRETEiJ_G0021634)	Gsk3b (MGP_SPRETEiJ_G0021635) ##22	Nr1i2 (MGP_SPRETEiJ_G0021636)	Cfap91 (MGP_SPRETEiJ_G0021637)	MGP_SPRETEiJ_G0021638	MGP_SPRETEiJ_G0021639	Popdc2 (MGP_SPRETEiJ_G0021640)	Pla1a (MGP_SPRETEiJ_G0021641)	Adprh (MGP_SPRETEiJ_G0021642)	Cd80 (MGP_SPRETEiJ_G0021643)	Timmdc1 (MGP_SPRETEiJ_G0021644)	Poglut1 (MGP_SPRETEiJ_G0021645)	Tmem39a (MGP_SPRETEiJ_G0021646)	Arhgap31 (MGP_SPRETEiJ_G0021647)	B4galt4 (MGP_SPRETEiJ_G0021648)	Upk1b (MGP_SPRETEiJ_G0021649)	Tex55 (MGP_SPRETEiJ_G0021650)
Steppe mouse	MODERN SPECIES	19	Fbxo40 (ENSMSIG00000017504)	Polq (ENSMSIG00000017530)	ENSMSIG00000017745	Stxbp5l (ENSMSIG00000017754)	ENSMSIG00000018266	Gtf2e1 (ENSMSIG00000018274)	Rabl3 (ENSMSIG00000018289)	ENSMSIG00000018320	Hgd (ENSMSIG00000018328)	ENSMSIG00000018377	ENSMSIG00000018386	Fstl1 (ENSMSIG00000018393)	Btnl12 (ENSMSIG00000018429)	Lrrc58 (ENSMSIG00000018454)	Gpr156 (ENSMSIG00000018477)	Gsk3b (ENSMSIG00000018514) ##22	Nr1i2 (ENSMSIG00000018649)	Cfap91 (ENSMSIG00000018655)	Cox17 (ENSMSIG00000018737)	Popdc2 (ENSMSIG00000018749)	Pla1a (ENSMSIG00000018780)	Adprh (ENSMSIG00000018796)	Cd80 (ENSMSIG00000018801)	ENSMSIG00000018884	Timmdc1 (ENSMSIG00000018900)	Poglut1 (ENSMSIG00000018915)	Tmem39a (ENSMSIG00000018936)	ENSMSIG00000019002	ENSMSIG00000019013	ENSMSIG00000019022	ENSMSIG00000019074
Ryukyu mouse	MODERN SPECIES	7	Iqcb1 (MGP_CAROLIEiJ_G0020721)	Golgb1 (MGP_CAROLIEiJ_G0020722)	Hcls1 (MGP_CAROLIEiJ_G0020723)	Fbxo40 (MGP_CAROLIEiJ_G0020724)	Polq (MGP_CAROLIEiJ_G0020725)	MGP_CAROLIEiJ_G0020726	MGP_CAROLIEiJ_G0020727	Rabl3 (MGP_CAROLIEiJ_G0020728)	Hgd (MGP_CAROLIEiJ_G0020729)	Ndufb4 (MGP_CAROLIEiJ_G0020730)	Fstl1 (MGP_CAROLIEiJ_G0020731)	Btnl12 (MGP_CAROLIEiJ_G0020732)	MGP_CAROLIEiJ_G0020733	MGP_CAROLIEiJ_G0020734	Gpr156 (MGP_CAROLIEiJ_G0020735)	Gsk3b (MGP_CAROLIEiJ_G0020736) ##22	Nr1i2 (MGP_CAROLIEiJ_G0020737)	Cfap91 (MGP_CAROLIEiJ_G0020738)	MGP_CAROLIEiJ_G0020739	MGP_CAROLIEiJ_G0020740	Popdc2 (MGP_CAROLIEiJ_G0020741)	Pla1a (MGP_CAROLIEiJ_G0020742)	Adprh (MGP_CAROLIEiJ_G0020743)	Cd80 (MGP_CAROLIEiJ_G0020744)	Timmdc1 (MGP_CAROLIEiJ_G0020745)	Poglut1 (MGP_CAROLIEiJ_G0020746)	Tmem39a (MGP_CAROLIEiJ_G0020747)	Arhgap31 (MGP_CAROLIEiJ_G0020748)	B4galt4 (MGP_CAROLIEiJ_G0020749)	Upk1b (MGP_CAROLIEiJ_G0020750)	Tex55 (MGP_CAROLIEiJ_G0020751)
Shrew mouse	MODERN SPECIES	3	Eaf2 (MGP_PahariEiJ_G0016421)	Iqcb1 (MGP_PahariEiJ_G0016422)	Golgb1 (MGP_PahariEiJ_G0016423)	Hcls1 (MGP_PahariEiJ_G0016424)	Fbxo40 (MGP_PahariEiJ_G0016425)	Polq (MGP_PahariEiJ_G0016426)	Stxbp5l (MGP_PahariEiJ_G0016427)	Gtf2e1 (MGP_PahariEiJ_G0016428)	Rabl3 (MGP_PahariEiJ_G0016429)	Hgd (MGP_PahariEiJ_G0016430)	Ndufb4 (MGP_PahariEiJ_G0016431)	Fstl1 (MGP_PahariEiJ_G0016432)	Btnl12 (MGP_PahariEiJ_G0016433)	Lrrc58 (MGP_PahariEiJ_G0016434)	Gpr156 (MGP_PahariEiJ_G0016435)	Gsk3b (MGP_PahariEiJ_G0016436) ##22	Nr1i2 (MGP_PahariEiJ_G0016437)	Cfap91 (MGP_PahariEiJ_G0016438)	MGP_PahariEiJ_G0016439	MGP_PahariEiJ_G0016440	Popdc2 (MGP_PahariEiJ_G0016441)	Pla1a (MGP_PahariEiJ_G0016442)	Adprh (MGP_PahariEiJ_G0016443)	Cd80 (MGP_PahariEiJ_G0016444)	Timmdc1 (MGP_PahariEiJ_G0016445)	Poglut1 (MGP_PahariEiJ_G0016446)	Tmem39a (MGP_PahariEiJ_G0016447)	Arhgap31 (MGP_PahariEiJ_G0016448)	B4galt4 (MGP_PahariEiJ_G0016449)	Upk1b (MGP_PahariEiJ_G0016450)	Tex55 (MGP_PahariEiJ_G0016451)
Rat	MODERN SPECIES	2	Hcls1 (ENSRNOG00000038881)	Fbxo40 (ENSRNOG00000002459)	Gng10-ps1 (ENSRNOG00000070865)	Polq (ENSRNOG00000002471)	Stxbp5l (ENSRNOG00000002496)	ENSRNOG00000068521	Gtf2e1 (ENSRNOG00000026008)	Rabl3 (ENSRNOG00000026085)	Hgd (ENSRNOG00000002701)	Ndufb4 (ENSRNOG00000002721)	LOC102552404 (ENSRNOG00000068993)	Lrrc58 (ENSRNOG00000027151)	ENSRNOG00000064655	Fstl1 (ENSRNOG00000002746)	Gpr156 (ENSRNOG00000002797)	Gsk3b (ENSRNOG00000002833) ##22	Nr1i2 (ENSRNOG00000002906)	Cfap91 (ENSRNOG00000002976)	Popdc2 (ENSRNOG00000058752)	Pla1a (ENSRNOG00000057153)	Adprh (ENSRNOG00000027260)	Cd80 (ENSRNOG00000001527)	Timmdc1 (ENSRNOG00000002999)	Poglut1 (ENSRNOG00000003014)	Tmem39a (ENSRNOG00000003075)	Arhgap31 (ENSRNOG00000003088)	B4galt4 (ENSRNOG00000003114)	Upk1b (ENSRNOG00000027380)	Tex55 (ENSRNOG00000042555)	ENSRNOG00000067288	RGD1563835 (ENSRNOG00000033603)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1215	Eaf2 (ENSNGAG00000018733)	Iqcb1 (ENSNGAG00000024265)	Golgb1 (ENSNGAG00000020167)	Hcls1 (ENSNGAG00000022704)	Fbxo40 (ENSNGAG00000004209)	Polq (ENSNGAG00000024216)	Stxbp5l (ENSNGAG00000015316)	Gtf2e1 (ENSNGAG00000018181)	Rabl3 (ENSNGAG00000001939)	Hgd (ENSNGAG00000021388)	Ndufb4 (ENSNGAG00000019446)	Fstl1 (ENSNGAG00000009480)	Btnl12 (ENSNGAG00000023554)	Lrrc58 (ENSNGAG00000023258)	Gpr156 (ENSNGAG00000010795)	Gsk3b (ENSNGAG00000002108) ##22	Nr1i2 (ENSNGAG00000023122)	Cfap91 (ENSNGAG00000022679)	Cox17 (ENSNGAG00000024232)	Popdc2 (ENSNGAG00000023409)	Pla1a (ENSNGAG00000024007)	Adprh (ENSNGAG00000022668)	Timmdc1 (ENSNGAG00000022283)	Poglut1 (ENSNGAG00000007500)	Tmem39a (ENSNGAG00000014483)	Arhgap31 (ENSNGAG00000003643)	B4galt4 (ENSNGAG00000024171)	Upk1b (ENSNGAG00000023566)	Igsf11 (ENSNGAG00000013606)	ENSNGAG00000024323	Lsamp (ENSNGAG00000003471)
Lesser Egyptian jerboa	MODERN SPECIES	137	Slc15a2 (ENSJJAG00000013093)	ENSJJAG00000014936	Iqcb1 (ENSJJAG00000015154)	Golgb1 (ENSJJAG00000016394)	Hcls1 (ENSJJAG00000015789)	Fbxo40 (ENSJJAG00000016012)	Stxbp5l (ENSJJAG00000019547)	Gtf2e1 (ENSJJAG00000023373)	Rabl3 (ENSJJAG00000023553)	Hgd (ENSJJAG00000000068)	Ndufb4 (ENSJJAG00000000112)	Fstl1 (ENSJJAG00000000598)	Btnl12 (ENSJJAG00000003184)	Lrrc58 (ENSJJAG00000005130)	Gpr156 (ENSJJAG00000007798)	Gsk3b (ENSJJAG00000010506) ##22	Nr1i2 (ENSJJAG00000011379)	Cfap91 (ENSJJAG00000012537)	Cox17 (ENSJJAG00000012774)	Popdc2 (ENSJJAG00000013185)	Pla1a (ENSJJAG00000013590)	Adprh (ENSJJAG00000015180)	Timmdc1 (ENSJJAG00000021387)	Poglut1 (ENSJJAG00000022613)	Tmem39a (ENSJJAG00000023701)	Arhgap31 (ENSJJAG00000003416)	B4galt4 (ENSJJAG00000010454)	Upk1b (ENSJJAG00000011260)	Igsf11 (ENSJJAG00000014150)	ENSJJAG00000016776	Lsamp (ENSJJAG00000018181)
Kangaroo rat	MODERN SPECIES	364	Eaf2 (ENSDORG00000001115)	Iqcb1 (ENSDORG00000001113)	Golgb1 (ENSDORG00000002423)	Hcls1 (ENSDORG00000002422)	Fbxo40 (ENSDORG00000002421)	Polq (ENSDORG00000002416)	Stxbp5l (ENSDORG00000007287)	Gtf2e1 (ENSDORG00000007285)	ENSDORG00000007284	Hgd (ENSDORG00000014504)	Ndufb4 (ENSDORG00000014502)	Fstl1 (ENSDORG00000002235)	Btnl12 (ENSDORG00000029670)	Lrrc58 (ENSDORG00000008401)	Gpr156 (ENSDORG00000006062)	Gsk3b (ENSDORG00000023434) ##22	Nr1i2 (ENSDORG00000003966)	Cfap91 (ENSDORG00000011559)	Popdc2 (ENSDORG00000009735)	Pla1a (ENSDORG00000009734)	Adprh (ENSDORG00000009733)	Timmdc1 (ENSDORG00000002926)	Poglut1 (ENSDORG00000002920)	Tmem39a (ENSDORG00000006747)	Arhgap31 (ENSDORG00000024309)	B4galt4 (ENSDORG00000008980)	Upk1b (ENSDORG00000008979)	Igsf11 (ENSDORG00000003342)
Primates	ANCESTRAL SPECIES	1	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Bushbaby	MODERN SPECIES	204	EAF2 (ENSOGAG00000000793)	IQCB1 (ENSOGAG00000004271)	GOLGB1 (ENSOGAG00000024169)	HCLS1 (ENSOGAG00000005785)	FBXO40 (ENSOGAG00000017238)	ENSOGAG00000002406	POLQ (ENSOGAG00000015795)	STXBP5L (ENSOGAG00000015785)	GTF2E1 (ENSOGAG00000026188)	RABL3 (ENSOGAG00000005961)	HGD (ENSOGAG00000005957)	NDUFB4 (ENSOGAG00000005956)	FSTL1 (ENSOGAG00000004636)	LRRC58 (ENSOGAG00000004634)	GPR156 (ENSOGAG00000006028)	GSK3B (ENSOGAG00000006019) ##22	NR1I2 (ENSOGAG00000006017)	CFAP91 (ENSOGAG00000005048)	COX17 (ENSOGAG00000005047)	POPDC2 (ENSOGAG00000005045)	PLA1A (ENSOGAG00000005044)	ADPRH (ENSOGAG00000005043)	TIMMDC1 (ENSOGAG00000028570)	POGLUT1 (ENSOGAG00000015892)	TMEM39A (ENSOGAG00000015889)	ARHGAP31 (ENSOGAG00000015882)	B4GALT4 (ENSOGAG00000006866)	UPK1B (ENSOGAG00000032595)	ENSOGAG00000033474	ENSOGAG00000025571	IGSF11 (ENSOGAG00000015209)
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mouse lemur	MODERN SPECIES		EAF2 (ENSMICG00000048552)	IQCB1 (ENSMICG00000049588)	GOLGB1 (ENSMICG00000048527)	HCLS1 (ENSMICG00000049096)	FBXO40 (ENSMICG00000049444)	POLQ (ENSMICG00000049493)	STXBP5L (ENSMICG00000049262)	ENSMICG00000049228	GTF2E1 (ENSMICG00000049416)	RABL3 (ENSMICG00000049288)	HGD (ENSMICG00000049553)	NDUFB4 (ENSMICG00000049509)	FSTL1 (ENSMICG00000049203)	LRRC58 (ENSMICG00000049536)	GPR156 (ENSMICG00000049051)	GSK3B (ENSMICG00000049060) ##22	NR1I2 (ENSMICG00000049095)	CFAP91 (ENSMICG00000049028)	COX17 (ENSMICG00000049148)	POPDC2 (ENSMICG00000048913)	PLA1A (ENSMICG00000049474)	ADPRH (ENSMICG00000048870)	CD80 (ENSMICG00000049031)	TIMMDC1 (ENSMICG00000049136)	POGLUT1 (ENSMICG00000048901)	TMEM39A (ENSMICG00000049505)	ARHGAP31 (ENSMICG00000049335)	B4GALT4 (ENSMICG00000049037)	UPK1B (ENSMICG00000049009)	ENSMICG00000049260	IGSF11 (ENSMICG00000049356)
Lemuriformes_a	ANCESTRAL SPECIES	9	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Coquerels sifaka	MODERN SPECIES	51	GOLGB1 (ENSPCOG00000008937)	HCLS1 (ENSPCOG00000019776)	FBXO40 (ENSPCOG00000026519)	POLQ (ENSPCOG00000024680)	STXBP5L (ENSPCOG00000018919)	ENSPCOG00000025486	GTF2E1 (ENSPCOG00000026236)	RABL3 (ENSPCOG00000022230)	ENSPCOG00000018784	HGD (ENSPCOG00000028747)	NDUFB4 (ENSPCOG00000028746)	FSTL1 (ENSPCOG00000011818)	LRRC58 (ENSPCOG00000003421)	GPR156 (ENSPCOG00000025801)	ENSPCOG00000022587	GSK3B (ENSPCOG00000023535) ##22	NR1I2 (ENSPCOG00000025084)	ENSPCOG00000026368	COX17 (ENSPCOG00000024353)	POPDC2 (ENSPCOG00000021339)	PLA1A (ENSPCOG00000015217)	ADPRH (ENSPCOG00000016902)	CD80 (ENSPCOG00000010751)	TIMMDC1 (ENSPCOG00000024837)	POGLUT1 (ENSPCOG00000023752)	TMEM39A (ENSPCOG00000023053)	ARHGAP31 (ENSPCOG00000026644)	B4GALT4 (ENSPCOG00000022714)	UPK1B (ENSPCOG00000012880)	ENSPCOG00000020710	IGSF11 (ENSPCOG00000019747)
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Tarsier	MODERN SPECIES	1080																GSK3B (ENSTSYG00000010761) ##22	NR1I2 (ENSTSYG00000010757)	MAATS1 (ENSTSYG00000012540)	ENSTSYG00000036378	POPDC2 (ENSTSYG00000007877)	PLA1A (ENSTSYG00000025395)
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Catarrhini	ANCESTRAL SPECIES	2	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cercopithecidae	ANCESTRAL SPECIES	1	ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cercopithecinae	ANCESTRAL SPECIES	5	ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Vervet Monkey	MODERN SPECIES	14	EAF2 (ENSCSAG00000007313)	IQCB1 (ENSCSAG00000007306)	ENSCSAG00000018717	GOLGB1 (ENSCSAG00000007292)	HCLS1 (ENSCSAG00000007278)	FBXO40 (ENSCSAG00000007268)	POLQ (ENSCSAG00000007239)	STXBP5L (ENSCSAG00000007174)	GTF2E1 (ENSCSAG00000007159)	RABL3 (ENSCSAG00000007155)	HGD (ENSCSAG00000007149)	ENSCSAG00000007142	FSTL1 (ENSCSAG00000007135)	LRRC58 (ENSCSAG00000007132)	GPR156 (ENSCSAG00000007128)	GSK3B (ENSCSAG00000007111) ##22	ENSCSAG00000007102	NR1I2 (ENSCSAG00000007092)	CFAP91 (ENSCSAG00000007085)	COX17 (ENSCSAG00000007074)	POPDC2 (ENSCSAG00000007064)	PLA1A (ENSCSAG00000007053)	ADPRH (ENSCSAG00000007046)	ENSCSAG00000007042	TIMMDC1 (ENSCSAG00000007036)	POGLUT1 (ENSCSAG00000007031)	TMEM39A (ENSCSAG00000007024)	ARHGAP31 (ENSCSAG00000007021)	B4GALT4 (ENSCSAG00000007013)	UPK1B (ENSCSAG00000007007)	TEX55 (ENSCSAG00000006999)
Cercopithecinae_a	ANCESTRAL SPECIES	5	ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Macaca	ANCESTRAL SPECIES	5	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.s	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378.i	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Macaca_a	ANCESTRAL SPECIES	5	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696.s	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378.i	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Crab-eating macaque	MODERN SPECIES	11	IQCB1 (ENSMFAG00000025425)	GOLGB1 (ENSMFAG00000031026)	HCLS1 (ENSMFAG00000039904)	FBXO40 (ENSMFAG00000043265)	ARGFX (ENSMFAG00000002211)	POLQ (ENSMFAG00000001627)	STXBP5L (ENSMFAG00000002402)	ENSMFAG00000060129	ENSMFAG00000002539	RABL3 (ENSMFAG00000031923)	HGD (ENSMFAG00000041993)	NDUFB4 (ENSMFAG00000038344)	FSTL1 (ENSMFAG00000036133)	LRRC58 (ENSMFAG00000003454)	GPR156 (ENSMFAG00000000407)	GSK3B (ENSMFAG00000002620) ##22	NR1I2 (ENSMFAG00000041037)	CFAP91 (ENSMFAG00000024362)	COX17 (ENSMFAG00000039368)	POPDC2 (ENSMFAG00000039734)	PLA1A (ENSMFAG00000044493)	ADPRH (ENSMFAG00000039321)	CD80 (ENSMFAG00000032987)	TIMMDC1 (ENSMFAG00000037047)	POGLUT1 (ENSMFAG00000014083)	TMEM39A (ENSMFAG00000046062)	ARHGAP31 (ENSMFAG00000041247)	B4GALT4 (ENSMFAG00000003907)	UPK1B (ENSMFAG00000001715)	TEX55 (ENSMFAG00000047751)	IGSF11 (ENSMFAG00000029911)
Rhesus	MODERN SPECIES	11	GOLGB1 (ENSMMUG00000013546)	ENSMMUG00000050100	HCLS1 (ENSMMUG00000013545)	FBXO40 (ENSMMUG00000013543)	POLQ (ENSMMUG00000007973)	STXBP5L (ENSMMUG00000011161)	ENSMMUG00000064431	GTF2E1 (ENSMMUG00000001596)	RABL3 (ENSMMUG00000001594)	HGD (ENSMMUG00000001593)	NDUFB4 (ENSMMUG00000001592)	ENSMMUG00000052213	FSTL1 (ENSMMUG00000002925)	LRRC58 (ENSMMUG00000000075)	GPR156 (ENSMMUG00000001981)	GSK3B (ENSMMUG00000001980) ##22	NR1I2 (ENSMMUG00000001976)	CFAP91 (ENSMMUG00000000907)	COX17 (ENSMMUG00000000906)	POPDC2 (ENSMMUG00000000905)	PLA1A (ENSMMUG00000000902)	ADPRH (ENSMMUG00000053955)	CD80 (ENSMMUG00000016367)	TIMMDC1 (ENSMMUG00000012014)	POGLUT1 (ENSMMUG00000012012)	TMEM39A (ENSMMUG00000012010)	ARHGAP31 (ENSMMUG00000012009)	B4GALT4 (ENSMMUG00000003592)	UPK1B (ENSMMUG00000057343)	TEX55 (ENSMMUG00000008078)	IGSF11 (ENSMMUG00000008075)
Pig-tailed macaque	MODERN SPECIES	453	HCLS1 (ENSMNEG00000041239)	FBXO40 (ENSMNEG00000041676)	ENSMNEG00000029929	ARGFX (ENSMNEG00000031585)	POLQ (ENSMNEG00000035186)	STXBP5L (ENSMNEG00000032136)	GTF2E1 (ENSMNEG00000028897)	RABL3 (ENSMNEG00000043980)	HGD (ENSMNEG00000035035)	NDUFB4 (ENSMNEG00000034340)	ENSMNEG00000009924	FSTL1 (ENSMNEG00000040132)	LRRC58 (ENSMNEG00000045148)	ENSMNEG00000037258	GPR156 (ENSMNEG00000030384)	GSK3B (ENSMNEG00000026988) ##22	NR1I2 (ENSMNEG00000028193)	ENSMNEG00000032477	CFAP91 (ENSMNEG00000006506)	COX17 (ENSMNEG00000036135)	POPDC2 (ENSMNEG00000040040)	PLA1A (ENSMNEG00000033914)	ADPRH (ENSMNEG00000039741)	CD80 (ENSMNEG00000028713)	TIMMDC1 (ENSMNEG00000029900)	POGLUT1 (ENSMNEG00000036383)	TMEM39A (ENSMNEG00000042242)	ARHGAP31 (ENSMNEG00000041713)	B4GALT4 (ENSMNEG00000039306)	UPK1B (ENSMNEG00000040721)	TEX55 (ENSMNEG00000032290)
Cercopithecinae_b	ANCESTRAL SPECIES		ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Olive baboon	MODERN SPECIES	11	IQCB1 (ENSPANG00000008985)	GOLGB1 (ENSPANG00000019976)	HCLS1 (ENSPANG00000007786)	FBXO40 (ENSPANG00000007138)	POLQ (ENSPANG00000000759)	STXBP5L (ENSPANG00000005242)	ENSPANG00000025526	GTF2E1 (ENSPANG00000007012)	RABL3 (ENSPANG00000001339)	HGD (ENSPANG00000022365)	NDUFB4 (ENSPANG00000017762)	FSTL1 (ENSPANG00000011991)	LRRC58 (ENSPANG00000023829)	GPR156 (ENSPANG00000001001)	ENSPANG00000041383	GSK3B (ENSPANG00000006079) ##22	NR1I2 (ENSPANG00000004760)	CFAP91 (ENSPANG00000009687)	COX17 (ENSPANG00000013328)	ENSPANG00000038606	POPDC2 (ENSPANG00000007989)	PLA1A (ENSPANG00000005384)	ADPRH (ENSPANG00000012444)	CD80 (ENSPANG00000016254)	TIMMDC1 (ENSPANG00000032428)	POGLUT1 (ENSPANG00000020852)	TMEM39A (ENSPANG00000007990)	ARHGAP31 (ENSPANG00000005670)	B4GALT4 (ENSPANG00000020310)	UPK1B (ENSPANG00000009689)	TEX55 (ENSPANG00000007696)
Cercopithecinae_d	ANCESTRAL SPECIES	58	ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00910000147904	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Sooty mangabey	MODERN SPECIES	149	HCLS1 (ENSCATG00000041184)	FBXO40 (ENSCATG00000029647)	ARGFX (ENSCATG00000026923)	ENSCATG00000037854	POLQ (ENSCATG00000014007)	STXBP5L (ENSCATG00000033294)	ENSCATG00000000823	GTF2E1 (ENSCATG00000015158)	RABL3 (ENSCATG00000032561)	ENSCATG00000037087	HGD (ENSCATG00000033112)	NDUFB4 (ENSCATG00000043235)	FSTL1 (ENSCATG00000042936)	LRRC58 (ENSCATG00000029315)	GPR156 (ENSCATG00000036077)	GSK3B (ENSCATG00000034546) ##22	NR1I2 (ENSCATG00000036881)	CFAP91 (ENSCATG00000036182)	COX17 (ENSCATG00000033492)	POPDC2 (ENSCATG00000029750)	PLA1A (ENSCATG00000037654)	ADPRH (ENSCATG00000038426)	CD80 (ENSCATG00000032954)	TIMMDC1 (ENSCATG00000032175)	POGLUT1 (ENSCATG00000038809)	TMEM39A (ENSCATG00000030118)	ARHGAP31 (ENSCATG00000032117)	B4GALT4 (ENSCATG00000034568)	UPK1B (ENSCATG00000038265)	TEX55 (ENSCATG00000039832)	IGSF11 (ENSCATG00000031378)
Drill	MODERN SPECIES	946													FSTL1 (ENSMLEG00000035985)	LRRC58 (ENSMLEG00000044006)	GPR156 (ENSMLEG00000034519)	GSK3B (ENSMLEG00000036229) ##22	NR1I2 (ENSMLEG00000023855)	CFAP91 (ENSMLEG00000029172)	COX17 (ENSMLEG00000031321)	POPDC2 (ENSMLEG00000034882)	PLA1A (ENSMLEG00000038157)	ADPRH (ENSMLEG00000034993)	CD80 (ENSMLEG00000030989)	TIMMDC1 (ENSMLEG00000034067)	POGLUT1 (ENSMLEG00000030364)	TMEM39A (ENSMLEG00000040902)	ARHGAP31 (ENSMLEG00000042306)	B4GALT4 (ENSMLEG00000029594)	UPK1B (ENSMLEG00000015492)	TEX55 (ENSMLEG00000028473)	IGSF11 (ENSMLEG00000040588)
Rhinopithecus	ANCESTRAL SPECIES	99	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00910000148071	ENSGT00950000183204.a	ENSGT00730000111572.a.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00940000161696.c.a.c	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Black snub-nosed monkey	MODERN SPECIES	116	HCLS1 (ENSRBIG00000015356)	ENSRBIG00000036098	FBXO40 (ENSRBIG00000040355)	ENSRBIG00000038038	POLQ (ENSRBIG00000023391)	STXBP5L (ENSRBIG00000040973)	ENSRBIG00000043061	GTF2E1 (ENSRBIG00000038747)	RABL3 (ENSRBIG00000040941)	HGD (ENSRBIG00000041495)	NDUFB4 (ENSRBIG00000042955)	FSTL1 (ENSRBIG00000035867)	LRRC58 (ENSRBIG00000001268)	ENSRBIG00000036153	GPR156 (ENSRBIG00000028090)	GSK3B (ENSRBIG00000036074) ##22	NR1I2 (ENSRBIG00000041558)	CFAP91 (ENSRBIG00000035959)	POPDC2 (ENSRBIG00000012807)	PLA1A (ENSRBIG00000033729)	ADPRH (ENSRBIG00000037989)	CD80 (ENSRBIG00000028466)
Golden snub-nosed monkey	MODERN SPECIES	2614						ENSRROG00000012507	ENSRROG00000034241	GTF2E1 (ENSRROG00000023327)	RABL3 (ENSRROG00000043745)	HGD (ENSRROG00000030112)	ENSRROG00000045489	FSTL1 (ENSRROG00000013663)	LRRC58 (ENSRROG00000038299)	ENSRROG00000029273	GPR156 (ENSRROG00000042771)	GSK3B (ENSRROG00000000048) ##22
Hominoidea	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.u	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Gibbon	MODERN SPECIES	13					POLQ (ENSNLEG00000005179)	ENSNLEG00000032376	ENSNLEG00000030901	STXBP5L (ENSNLEG00000005139)	ENSNLEG00000005175	ENSNLEG00000030176	GTF2E1 (ENSNLEG00000005135)	RABL3 (ENSNLEG00000031723)	FSTL1 (ENSNLEG00000005099)	LRRC58 (ENSNLEG00000033297)	GPR156 (ENSNLEG00000005093)	GSK3B (ENSNLEG00000005074) ##22	NR1I2 (ENSNLEG00000005060)	CFAP91 (ENSNLEG00000005022)	ENSNLEG00000005017	POPDC2 (ENSNLEG00000005011)	PLA1A (ENSNLEG00000004973)	ADPRH (ENSNLEG00000004967)	CD80 (ENSNLEG00000004954)	TIMMDC1 (ENSNLEG00000004919)	POGLUT1 (ENSNLEG00000004888)	TMEM39A (ENSNLEG00000004873)	ARHGAP31 (ENSNLEG00000004857)	B4GALT4 (ENSNLEG00000004825)	UPK1B (ENSNLEG00000004811)	ENSNLEG00000004805	IGSF11 (ENSNLEG00000004791)
Hominidae	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.u.b	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Orangutan	MODERN SPECIES	16	IQCB1 (ENSPPYG00000013494)	GOLGB1 (ENSPPYG00000029668)	HCLS1 (ENSPPYG00000013495)	FBXO40 (ENSPPYG00000013496)	ARGFX (ENSPPYG00000013497)	POLQ (ENSPPYG00000013498)	STXBP5L (ENSPPYG00000013499)	GTF2E1 (ENSPPYG00000013500)	RABL3 (ENSPPYG00000013501)	HGD (ENSPPYG00000013502)	NDUFB4 (ENSPPYG00000013503)	FSTL1 (ENSPPYG00000013504)	LRRC58 (ENSPPYG00000013505)	ENSPPYG00000037160	GPR156 (ENSPPYG00000013506)	GSK3B (ENSPPYG00000013507) ##22	NR1I2 (ENSPPYG00000013508)	CFAP91 (ENSPPYG00000013509)	ENSPPYG00000031956	POPDC2 (ENSPPYG00000013510)	PLA1A (ENSPPYG00000013512)	ADPRH (ENSPPYG00000013513)	CD80 (ENSPPYG00000013514)	TIMMDC1 (ENSPPYG00000013515)	POGLUT1 (ENSPPYG00000013516)	TMEM39A (ENSPPYG00000013517)	ARHGAP31 (ENSPPYG00000013518)	B4GALT4 (ENSPPYG00000013519)	UPK1B (ENSPPYG00000014481)	ENSPPYG00000038442	IGSF11 (ENSPPYG00000013521)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.u.b	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Gorilla	MODERN SPECIES	16	GOLGB1 (ENSGGOG00000010257)	HCLS1 (ENSGGOG00000016791)	FBXO40 (ENSGGOG00000016785)	ARGFX (ENSGGOG00000005362)	ENSGGOG00000038094	POLQ (ENSGGOG00000011565)	STXBP5L (ENSGGOG00000034916)	GTF2E1 (ENSGGOG00000022773)	RABL3 (ENSGGOG00000006059)	HGD (ENSGGOG00000009039)	NDUFB4 (ENSGGOG00000013923)	ENSGGOG00000036304	ENSGGOG00000002305	LRRC58 (ENSGGOG00000006581)	GPR156 (ENSGGOG00000005597)	GSK3B (ENSGGOG00000007367) ##22	NR1I2 (ENSGGOG00000007361)	CFAP91 (ENSGGOG00000009828)	ENSGGOG00000005152	POPDC2 (ENSGGOG00000004357)	PLA1A (ENSGGOG00000003020)	ADPRH (ENSGGOG00000005155)	ENSGGOG00000041231	CD80 (ENSGGOG00000027712)	ENSGGOG00000024693	POGLUT1 (ENSGGOG00000001224)	TMEM39A (ENSGGOG00000011856)	ARHGAP31 (ENSGGOG00000007341)	ENSGGOG00000038561	ENSGGOG00000011484	UPK1B (ENSGGOG00000011479)
Homo/Pan group	ANCESTRAL SPECIES	3	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.u.b	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Human	MODERN SPECIES	15	EAF2 (ENSG00000145088)	IQCB1 (ENSG00000173226)	GOLGB1 (ENSG00000173230)	HCLS1 (ENSG00000180353)	FBXO40 (ENSG00000163833)	ARGFX (ENSG00000186103)	POLQ (ENSG00000051341)	STXBP5L (ENSG00000145087)	GTF2E1 (ENSG00000153767)	RABL3 (ENSG00000144840)	HGD (ENSG00000113924)	NDUFB4 (ENSG00000065518)	FSTL1 (ENSG00000163430)	LRRC58 (ENSG00000163428)	GPR156 (ENSG00000175697)	GSK3B (ENSG00000082701) ##22	NR1I2 (ENSG00000144852)	ENSG00000285585	CFAP91 (ENSG00000183833)	COX17 (ENSG00000138495)	POPDC2 (ENSG00000121577)	PLA1A (ENSG00000144837)	ADPRH (ENSG00000144843)	CD80 (ENSG00000121594)	TIMMDC1 (ENSG00000113845)	POGLUT1 (ENSG00000163389)	TMEM39A (ENSG00000176142)	ARHGAP31 (ENSG00000031081)	B4GALT4 (ENSG00000121578)	UPK1B (ENSG00000114638)	ENSG00000251012
Pan	ANCESTRAL SPECIES	2	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572.a.a	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133.u.b	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Bonobo	MODERN SPECIES	16	EAF2 (ENSPPAG00000042010)	IQCB1 (ENSPPAG00000020920)	GOLGB1 (ENSPPAG00000032862)	HCLS1 (ENSPPAG00000016859)	FBXO40 (ENSPPAG00000043031)	ARGFX (ENSPPAG00000029106)	POLQ (ENSPPAG00000027313)	STXBP5L (ENSPPAG00000036564)	GTF2E1 (ENSPPAG00000030846)	RABL3 (ENSPPAG00000036997)	HGD (ENSPPAG00000031410)	NDUFB4 (ENSPPAG00000027750)	FSTL1 (ENSPPAG00000029345)	LRRC58 (ENSPPAG00000026667)	GPR156 (ENSPPAG00000026940)	GSK3B (ENSPPAG00000040976) ##22	NR1I2 (ENSPPAG00000028796)	CFAP91 (ENSPPAG00000028499)	ENSPPAG00000039098	POPDC2 (ENSPPAG00000030386)	PLA1A (ENSPPAG00000024154)	ADPRH (ENSPPAG00000037239)	CD80 (ENSPPAG00000039364)	TIMMDC1 (ENSPPAG00000027402)	POGLUT1 (ENSPPAG00000037480)	TMEM39A (ENSPPAG00000019949)	ARHGAP31 (ENSPPAG00000012988)	B4GALT4 (ENSPPAG00000034244)	UPK1B (ENSPPAG00000038565)	TEX55 (ENSPPAG00000034523)	IGSF11 (ENSPPAG00000026405)
Chimpanzee	MODERN SPECIES	16	IQCB1 (ENSPTRG00000015281)	GOLGB1 (ENSPTRG00000015280)	HCLS1 (ENSPTRG00000015279)	FBXO40 (ENSPTRG00000015278)	ARGFX (ENSPTRG00000015277)	ENSPTRG00000044655	POLQ (ENSPTRG00000015276)	STXBP5L (ENSPTRG00000015274)	GTF2E1 (ENSPTRG00000015273)	RABL3 (ENSPTRG00000015272)	HGD (ENSPTRG00000015271)	NDUFB4 (ENSPTRG00000015270)	FSTL1 (ENSPTRG00000015269)	LRRC58 (ENSPTRG00000015268)	GPR156 (ENSPTRG00000015267)	GSK3B (ENSPTRG00000015264) ##22	NR1I2 (ENSPTRG00000015263)	CFAP91 (ENSPTRG00000015262)	COX17 (ENSPTRG00000048880)	POPDC2 (ENSPTRG00000015259)	PLA1A (ENSPTRG00000015258)	ADPRH (ENSPTRG00000015257)	CD80 (ENSPTRG00000015256)	TIMMDC1 (ENSPTRG00000015255)	POGLUT1 (ENSPTRG00000015254)	TMEM39A (ENSPTRG00000015253)	ARHGAP31 (ENSPTRG00000015252)	B4GALT4 (ENSPTRG00000015251)	UPK1B (ENSPTRG00000015250)	TEX55 (ENSPTRG00000042893)	IGSF11 (ENSPTRG00000015248)
Platyrrhini	ANCESTRAL SPECIES	37	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00940000158694	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Mas night monkey	MODERN SPECIES	382							ENSANAG00000038101	GTF2E1 (ENSANAG00000025430)	RABL3 (ENSANAG00000027278)	ENSANAG00000037659	HGD (ENSANAG00000030887)	NDUFB4 (ENSANAG00000034913)	FSTL1 (ENSANAG00000020551)	LRRC58 (ENSANAG00000031980)	GPR156 (ENSANAG00000022869)	GSK3B (ENSANAG00000026215) ##22	ENSANAG00000032801	NR1I2 (ENSANAG00000036076)	CFAP91 (ENSANAG00000030006)	COX17 (ENSANAG00000020473)	POPDC2 (ENSANAG00000029325)	PLA1A (ENSANAG00000028215)	ENSANAG00000010341	ADPRH (ENSANAG00000031217)	CD80 (ENSANAG00000034828)	TIMMDC1 (ENSANAG00000000134)	POGLUT1 (ENSANAG00000022075)	TMEM39A (ENSANAG00000032194)	ARHGAP31 (ENSANAG00000031058)	B4GALT4 (ENSANAG00000034766)	UPK1B (ENSANAG00000036306)
Cebidae	ANCESTRAL SPECIES	35	ENSGT00940000156507	ENSGT00390000017724.a.b	ENSGT00390000002188	ENSGT00730000111007.a.a	ENSGT00940000158997	ENSGT00950000183204.a	ENSGT00730000111572	ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Cebidae_a	ANCESTRAL SPECIES	77							ENSGT00950000182906.b.b	ENSGT00390000016696	ENSGT00390000007467	ENSGT00390000004601	ENSGT00390000007133	ENSGT00390000003316.d.t	ENSGT00940000157784	ENSGT00940000156556	ENSGT00940000159755	ENSGT00520000055635.c.a ##22	ENSGT00940000161118	ENSGT00390000003024	ENSGT00390000002329	ENSGT00390000002563.b.a.b	ENSGT00940000159279	ENSGT00530000063627.b	ENSGT00940000162632	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000018895.a	ENSGT00940000159458	ENSGT00940000158378	ENSGT00940000160779	ENSGT00940000154487.A	ENSGT00940000156392.a
Bolivian squirrel monkey	MODERN SPECIES	115							STXBP5L (ENSSBOG00000026739)	GTF2E1 (ENSSBOG00000021805)	RABL3 (ENSSBOG00000004022)	HGD (ENSSBOG00000023933)	NDUFB4 (ENSSBOG00000021750)	ENSSBOG00000027252	FSTL1 (ENSSBOG00000029486)	LRRC58 (ENSSBOG00000033532)	GPR156 (ENSSBOG00000032413)	GSK3B (ENSSBOG00000022634) ##22	ENSSBOG00000031921	NR1I2 (ENSSBOG00000014295)	CFAP91 (ENSSBOG00000030363)	COX17 (ENSSBOG00000022886)	POPDC2 (ENSSBOG00000031105)	PLA1A (ENSSBOG00000021058)	ADPRH (ENSSBOG00000009571)	CD80 (ENSSBOG00000022500)	TIMMDC1 (ENSSBOG00000035197)	POGLUT1 (ENSSBOG00000026525)	TMEM39A (ENSSBOG00000022611)	ARHGAP31 (ENSSBOG00000027891)	B4GALT4 (ENSSBOG00000021271)	UPK1B (ENSSBOG00000031224)	TEX55 (ENSSBOG00000019369)
Capuchin	MODERN SPECIES	494					ENSCCAG00000024074	POLQ (ENSCCAG00000026574)	STXBP5L (ENSCCAG00000024739)	GTF2E1 (ENSCCAG00000025902)	ENSCCAG00000025990	HGD (ENSCCAG00000028314)	ENSCCAG00000029265	ENSCCAG00000023419	FSTL1 (ENSCCAG00000030935)	LRRC58 (ENSCCAG00000022283)	GPR156 (ENSCCAG00000034047)	GSK3B (ENSCCAG00000024840) ##22	NR1I2 (ENSCCAG00000021610)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES		ENSCJAG00000077810	ENSCJAG00000009380	LRCH1 (ENSCJAG00000009392)	ENSCJAG00000086315	ENSCJAG00000009449	ENSCJAG00000079784	ENSCJAG00000015288	ENSCJAG00000065387	ENSCJAG00000082688	ENSCJAG00000013220	ENSCJAG00000013242	ENSCJAG00000048624	MFSD14B (ENSCJAG00000013248)	ENSCJAG00000013273	ENSCJAG00000013291	ENSCJAG00000068886 ##22	SUSD3 (ENSCJAG00000041233)	CARD19 (ENSCJAG00000046539)	NINJ1 (ENSCJAG00000071616)	WNK2 (ENSCJAG00000011431)	ENSCJAG00000081947	FAM120A (ENSCJAG00000011461)	ENSCJAG00000076126	PHF2 (ENSCJAG00000017343)	PTPDC1 (ENSCJAG00000017408)	BARX1 (ENSCJAG00000045992)	ENSCJAG00000069607	ENSCJAG00000075853	ENSCJAG00000070221	ENSCJAG00000008312	ENSCJAG00000042138
Marmoset	MODERN SPECIES	6	IQCB1 (ENSCJAG00000008369)	GOLGB1 (ENSCJAG00000008408)	HCLS1 (ENSCJAG00000008451)	POLQ (ENSCJAG00000008508)	ARGFX (ENSCJAG00000008507)	STXBP5L (ENSCJAG00000008529)	ENSCJAG00000077120	GTF2E1 (ENSCJAG00000008605)	RABL3 (ENSCJAG00000008611)	HGD (ENSCJAG00000008626)	NDUFB4 (ENSCJAG00000008695)	FSTL1 (ENSCJAG00000008700)	ENSCJAG00000078663	LRRC58 (ENSCJAG00000008751)	GPR156 (ENSCJAG00000038418)	GSK3B (ENSCJAG00000008783) ##22	NR1I2 (ENSCJAG00000008854)	CFAP91 (ENSCJAG00000008891)	ENSCJAG00000008938	POPDC2 (ENSCJAG00000008939)	ENSCJAG00000087027	PLA1A (ENSCJAG00000008949)	ENSCJAG00000087121	ADPRH (ENSCJAG00000008966)	CD80 (ENSCJAG00000008972)	TIMMDC1 (ENSCJAG00000008990)	POGLUT1 (ENSCJAG00000044114)	TMEM39A (ENSCJAG00000009036)	ARHGAP31 (ENSCJAG00000009060)	B4GALT4 (ENSCJAG00000009072)	UPK1B (ENSCJAG00000009095)
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Amniota	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Theria	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Glires	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Rodentia	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Sciuridae	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Marmotini	ANCESTRAL SPECIES																	ENSGT00520000055635.d ##22
Alpin marmot	MODERN SPECIES	248																ENSMMMG00000007543 ##22	ENSMMMG00000007540
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00520000055635 #22
Hagfish	MODERN SPECIES	479															ENSEBUG00000013686	gsk3aa (ENSEBUG00000012948) #22	ENSEBUG00000011715	ENSEBUG00000013781	rps25 (ENSEBUG00000006396)	ENSEBUG00000002796
Ciona	ANCESTRAL SPECIES																	ENSGT00520000055635 #22
Ciona savignyi	MODERN SPECIES	18			ENSCSAVG00000003236	ENSCSAVG00000003212	ENSCSAVG00000003207	ENSCSAVG00000003194	ENSCSAVG00000003187	ENSCSAVG00000002963	ENSCSAVG00000002933	ENSCSAVG00000002917	ENSCSAVG00000002914	ENSCSAVG00000002911	ENSCSAVG00000002906	ENSCSAVG00000002905	ENSCSAVG00000002902	ENSCSAVG00000002894 #22	ENSCSAVG00000002850	ENSCSAVG00000002845	ENSCSAVG00000002824	ENSCSAVG00000002821	ENSCSAVG00000002814	ENSCSAVG00000002811	ENSCSAVG00000002785	ENSCSAVG00000002671	ENSCSAVG00000002581	ENSCSAVG00000002519	ENSCSAVG00000002270	ENSCSAVG00000002210	ENSCSAVG00000002052	ENSCSAVG00000002026	ENSCSAVG00000002024
Ciona intestinalis	MODERN SPECIES	148				ENSCING00000012365	ENSCING00000007679	ENSCING00000012369	ENSCING00000004976	ENSCING00000021673	ENSCING00000012370	ENSCING00000001771	ENSCING00000012372	ENSCING00000012371	ENSCING00000017584	ENSCING00000024117	ENSCING00000001823	gsk (ENSCING00000001821) #22	ENSCING00000019468	ENSCING00000001809	ENSCING00000001803	ENSCING00000001801	ENSCING00000001776	ENSCING00000020788	ENSCING00000001773	ENSCING00000024192	ENSCING00000012373	ENSCING00000005740	ENSCING00000005762	ENSCING00000005770	ENSCING00000005829	ENSCING00000012376	ENSCING00000005847