Myomorpha DUPLICATION Myomorpha ANCESTRAL SPECIES 32 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000163647 #27 ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 Muroidea ANCESTRAL SPECIES 25 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000163647 #27 ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 Muroidea_A ANCESTRAL SPECIES 10 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 ENSGT00940000158106 #37 Cricetidae ANCESTRAL SPECIES 15 ENSGT00390000012063 #8 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b.a #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 ENSGT00940000158106 #37 Cricetinae ANCESTRAL SPECIES 18 ENSGT00390000012063 #8 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00940000159552 #23 ENSGT00390000016051 #24 ENSGT00390000012569.b.a #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 ENSGT00940000158106 #37 Golden Hamster MODERN SPECIES 642 Itm2b (ENSMAUG00000017281) #7 Med4 (ENSMAUG00000021269) #8 Nudt15 (ENSMAUG00000018405) #9 Sucla2 (ENSMAUG00000008374) #10 Htr2a (ENSMAUG00000011880) #11 Esd (ENSMAUG00000021229) #12 Lrch1 (ENSMAUG00000001816) #13 Lrrc63 (ENSMAUG00000017212) #14 ENSMAUG00000017813 #15 Cpb2 (ENSMAUG00000011270) #16 ENSMAUG00000005243 #17 Siah3 (ENSMAUG00000016684) #18 Cby2 (ENSMAUG00000021027) #19 Cog3 (ENSMAUG00000018785) #20 Slc25a30 (ENSMAUG00000012973) #21 Tpt1 (ENSMAUG00000014012) #22 Kctd4 (ENSMAUG00000005135) #23 Gtf2f2 (ENSMAUG00000018898) #24 Gpalpp1 (ENSMAUG00000021389) #25 Nufip1 (ENSMAUG00000021413) #26 ENSMAUG00000014274 #27 Serp2 (ENSMAUG00000019897) #28 Lacc1 (ENSMAUG00000018912) #29 ENSMAUG00000013996 #30 Enox1 (ENSMAUG00000019233) #31 Dnajc15 (ENSMAUG00000009642) #32 Epsti1 (ENSMAUG00000018985) #33 Fam216b (ENSMAUG00000014549) #34 Tnfsf11 (ENSMAUG00000001005) #35 Akap11 (ENSMAUG00000016985) #36 Dgkh (ENSMAUG00000017457) #37 Chinese hamster chok1gshd MODERN SPECIES 3 Med4 (ENSCGRG00001018208) #8 Nudt15 (ENSCGRG00001001521) #9 SUCLA2 (ENSCGRG00001009190) #10 HTR2A (ENSCGRG00001000307) #11 ENSCGRG00001015731 #12 Lrch1 (ENSCGRG00001021051) #13 Rubcnl (ENSCGRG00001015225) Lrrc63 (ENSCGRG00001021365) #14 Lcp1 (ENSCGRG00001021099) #15 Cpb2 (ENSCGRG00001000100) #16 Zc3h13 (ENSCGRG00001014490) Siah3 (ENSCGRG00001022985) #18 Cby2 (ENSCGRG00001019775) #19 Cog3 (ENSCGRG00001023420) #20 Slc25a30 (ENSCGRG00001009475) #21 Tpt1 (ENSCGRG00001019454) #22 Gtf2f2 (ENSCGRG00001015200) #24 Kctd4 (ENSCGRG00001001160) #23 Gpalpp1 (ENSCGRG00001020996) #25 Nufip1 (ENSCGRG00001012209) #26 Tsc22d1 (ENSCGRG00001001346) Serp2 (ENSCGRG00001003518) #28 Lacc1 (ENSCGRG00001020034) #29 Ccdc122 (ENSCGRG00001006861) #30 Enox1 (ENSCGRG00001014073) #31 Dnajc15 (ENSCGRG00001000292) #32 Epsti1 (ENSCGRG00001009306) #33 Fam216b (ENSCGRG00001000086) #34 Tnfsf11 (ENSCGRG00001013327) #35 Akap11 (ENSCGRG00001020906) #36 Dgkh (ENSCGRG00001012161) #37 Cricetidae_B ANCESTRAL SPECIES 11 ENSGT00390000012063 #8 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b.a #25 ENSGT00390000003758 #26 ENSGT00940000163647 #27 ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 ENSGT00940000158106 #37 Prairie vole DUPLICATION Prairie vole DUPLICATION Prairie vole MODERN SPECIES 8 Ttf2 (ENSMOCG00000008415) Ptgfrn (ENSMOCG00000020768) Igsf3 (ENSMOCG00000005813) Atp1a1 (ENSMOCG00000006963) Mab21l3 (ENSMOCG00000016617) ENSMOCG00000020465 Nhlh2 (ENSMOCG00000007572) Casq2 (ENSMOCG00000014851) Vangl1 (ENSMOCG00000018281) Ngf (ENSMOCG00000021179) Tspan2 (ENSMOCG00000003591) Tshb (ENSMOCG00000006126) Sycp1 (ENSMOCG00000009622) Nr1h5 (ENSMOCG00000012316) Sike1 (ENSMOCG00000000516) ENSMOCG00000009367 #22 Csde1 (ENSMOCG00000018960) Nras (ENSMOCG00000022441) Ampd1 (ENSMOCG00000010785) Dennd2c (ENSMOCG00000009830) Bcas2 (ENSMOCG00000013157) Trim33 (ENSMOCG00000013853) Syt6 (ENSMOCG00000017004) Olfml3 (ENSMOCG00000001104) Hipk1 (ENSMOCG00000009217) Dclre1b (ENSMOCG00000014786) Ap4b1 (ENSMOCG00000002528) Chil6 (ENSMOCG00000000792) Dennd2d (ENSMOCG00000020692) Cept1 (ENSMOCG00000014223) Dram2 (ENSMOCG00000018158) Prairie vole MODERN SPECIES Akap5 (ENSMOCG00000021957) ENSMOCG00000005905 Zbtb1 (ENSMOCG00000006992) Ppp1r36 (ENSMOCG00000018162) Plekhg3 (ENSMOCG00000011351) Sptb (ENSMOCG00000005817) Fntb (ENSMOCG00000017411) Gpx2 (ENSMOCG00000017976) Rab15 (ENSMOCG00000018796) Max (ENSMOCG00000013047) ENSMOCG00000013818 Fut8 (ENSMOCG00000022113) Gm6657 (ENSMOCG00000015223) Gphn (ENSMOCG00000022692) ENSMOCG00000007706 ENSMOCG00000017766 #22 Garin2 (ENSMOCG00000019257) Pals1 (ENSMOCG00000021385) Atp6v1d (ENSMOCG00000001465) ENSMOCG00000003380 Plek2 (ENSMOCG00000013960) Tmem229b (ENSMOCG00000017579) Plekhh1 (ENSMOCG00000009101) Pigh (ENSMOCG00000017829) Arg2 (ENSMOCG00000019522) ENSMOCG00000020131 Rdh11 (ENSMOCG00000017818) Rdh12 (ENSMOCG00000012262) Zfyve26 (ENSMOCG00000015283) Rad51b (ENSMOCG00000021684) Zfp36l1 (ENSMOCG00000003189) Prairie vole MODERN SPECIES 84 ENSMOCG00000020138 ENSMOCG00000016285 ENSMOCG00000009387 Edem1 (ENSMOCG00000020129) Arl8b (ENSMOCG00000018769) Bhlhe40 (ENSMOCG00000014385) Itpr1 (ENSMOCG00000002247) Sumf1 (ENSMOCG00000014598) Setmar (ENSMOCG00000003026) Lrrn1 (ENSMOCG00000001702) Crbn (ENSMOCG00000019318) Trnt1 (ENSMOCG00000004539) Il5ra (ENSMOCG00000015311) Cntn4 (ENSMOCG00000013257) Cntn6 (ENSMOCG00000005399) ENSMOCG00000009333 #22 ENSMOCG00000016932 ENSMOCG00000020899 ENSMOCG00000002512 ENSMOCG00000021562 Cntn3 (ENSMOCG00000007453) ENSMOCG00000009808 Pdzrn3 (ENSMOCG00000015544) ENSMOCG00000000955 Gxylt2 (ENSMOCG00000001994) Shq1 (ENSMOCG00000017836) ENSMOCG00000006102 Prok2 (ENSMOCG00000016202) Gpr27 (ENSMOCG00000010723) Eif4e3 (ENSMOCG00000020297) Foxp1 (ENSMOCG00000013376) Northern American deer mouse MODERN SPECIES 22 Nudt15 (ENSPEMG00000013922) #9 Sucla2 (ENSPEMG00000020269) #10 ENSPEMG00000024389 Htr2a (ENSPEMG00000019339) #11 Esd (ENSPEMG00000019972) #12 Lrch1 (ENSPEMG00000019644) #13 Rubcnl (ENSPEMG00000008281) Lrrc63 (ENSPEMG00000020509) #14 Lcp1 (ENSPEMG00000009810) #15 Cpb2 (ENSPEMG00000021086) #16 Zc3h13 (ENSPEMG00000021979) Siah3 (ENSPEMG00000028254) #18 Cby2 (ENSPEMG00000020758) #19 Cog3 (ENSPEMG00000020827) #20 Slc25a30 (ENSPEMG00000022181) #21 Tpt1 (ENSPEMG00000001813) #22 Gtf2f2 (ENSPEMG00000027889) #24 Kctd4 (ENSPEMG00000006357) #23 Gpalpp1 (ENSPEMG00000000218) #25 Nufip1 (ENSPEMG00000023639) #26 ENSPEMG00000012421 Tsc22d1 (ENSPEMG00000022760) ENSPEMG00000024909 Lacc1 (ENSPEMG00000011166) #29 Ccdc122 (ENSPEMG00000013832) #30 Enox1 (ENSPEMG00000009188) #31 Dnajc15 (ENSPEMG00000017585) #32 Epsti1 (ENSPEMG00000012785) #33 Fam216b (ENSPEMG00000010168) #34 Tnfsf11 (ENSPEMG00000026330) #35 Akap11 (ENSPEMG00000017768) #36 Murinae DUPLICATION Murinae DUPLICATION Murinae ANCESTRAL SPECIES 16 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b.c.a #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 ENSGT00940000158106 #37 Mus ANCESTRAL SPECIES 8 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b.c.a #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00860000135855 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 Mus_A ANCESTRAL SPECIES 12 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864 #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b.c.a #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00860000135855 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 Ryukyu mouse MODERN SPECIES 5 Nudt15 (MGP_CAROLIEiJ_G0019503) #9 Sucla2 (MGP_CAROLIEiJ_G0019504) #10 Htr2a (MGP_CAROLIEiJ_G0019505) #11 Esd (MGP_CAROLIEiJ_G0019506) #12 Lrch1 (MGP_CAROLIEiJ_G0019507) #13 Rubcnl (MGP_CAROLIEiJ_G0019508) Lrrc63 (MGP_CAROLIEiJ_G0019509) #14 Lcp1 (MGP_CAROLIEiJ_G0019510) #15 Cpb2 (MGP_CAROLIEiJ_G0019511) #16 Zc3h13 (MGP_CAROLIEiJ_G0019512) Siah3 (MGP_CAROLIEiJ_G0019513) #18 Cby2 (MGP_CAROLIEiJ_G0019514) #19 MGP_CAROLIEiJ_G0019515 Cog3 (MGP_CAROLIEiJ_G0019516) #20 Slc25a30 (MGP_CAROLIEiJ_G0019517) #21 Tpt1 (MGP_CAROLIEiJ_G0019518) #22 Gtf2f2 (MGP_CAROLIEiJ_G0019519) #24 Kctd4 (MGP_CAROLIEiJ_G0019520) #23 Gpalpp1 (MGP_CAROLIEiJ_G0019521) #25 Nufip1 (MGP_CAROLIEiJ_G0019522) #26 Tsc22d1 (MGP_CAROLIEiJ_G0019523) Serp2 (MGP_CAROLIEiJ_G0019524) #28 MGP_CAROLIEiJ_G0019525 #29 Ccdc122 (MGP_CAROLIEiJ_G0019526) #30 Enox1 (MGP_CAROLIEiJ_G0019527) #31 MGP_CAROLIEiJ_G0019528 Dnajc15 (MGP_CAROLIEiJ_G0019529) #32 Epsti1 (MGP_CAROLIEiJ_G0019530) #33 Fam216b (MGP_CAROLIEiJ_G0019531) #34 Tnfsf11 (MGP_CAROLIEiJ_G0019532) #35 Akap11 (MGP_CAROLIEiJ_G0019533) #36 Mus_B ANCESTRAL SPECIES 11 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864.db #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00940000153655.A.a ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b.c.a #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00860000135855 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 Mouse MODERN SPECIES 5 Nudt15 (ENSMUSG00000033405) #9 Sucla2 (ENSMUSG00000022110) #10 Htr2a (ENSMUSG00000034997) #11 Esd (ENSMUSG00000021996) #12 Lrch1 (ENSMUSG00000068015) #13 Rubcnl (ENSMUSG00000034959) Lrrc63 (ENSMUSG00000021997) #14 Lcp1 (ENSMUSG00000021998) #15 Cpb2 (ENSMUSG00000021999) #16 Zc3h13 (ENSMUSG00000022000) Siah3 (ENSMUSG00000091722) #18 Cby2 (ENSMUSG00000034913) #19 Erich6b (ENSMUSG00000022002) Cog3 (ENSMUSG00000034893) #20 Slc25a30 (ENSMUSG00000022003) #21 Tpt1 (ENSMUSG00000060126) #22 Gtf2f2 (ENSMUSG00000067995) #24 Kctd4 (ENSMUSG00000046523) #23 Gpalpp1 (ENSMUSG00000022008) #25 Nufip1 (ENSMUSG00000022009) #26 Tsc22d1 (ENSMUSG00000022010) Serp2 (ENSMUSG00000052584) #28 Lacc1 (ENSMUSG00000044350) #29 Ccdc122 (ENSMUSG00000034795) #30 Enox1 (ENSMUSG00000022012) #31 Dnajc15 (ENSMUSG00000022013) #32 Epsti1 (ENSMUSG00000022014) #33 Fam216b (ENSMUSG00000045655) #34 Tnfsf11 (ENSMUSG00000022015) #35 Akap11 (ENSMUSG00000022016) #36 Dgkh (ENSMUSG00000034731) #37 Mus_C ANCESTRAL SPECIES 20 ENSGT00390000003338 #9 ENSGT00390000010170.a.b #10 ENSGT01050000244937.a.a #11 ENSGT00390000011864.db #12 ENSGT00940000159528 #13 ENSGT00940000160585 ENSGT00710000106860 #14 ENSGT00950000183097.a.a.b #15 ENSGT00940000159160 #16 ENSGT00730000111163 ENSGT00940000161772 #18 ENSGT00940000153137.a.b.b.a #19 ENSGT00520000061084 ENSGT00390000015682 #20 ENSGT00940000158961 #21 ENSGT00390000006051.a.b.b.c.b.c.a #22 ENSGT00390000016051 #24 ENSGT00940000159552 #23 ENSGT00390000012569.b #25 ENSGT00390000003758 #26 ENSGT00940000159144.B ENSGT00940000162467.b #28 ENSGT00390000000693 #29 ENSGT00390000005130 #30 ENSGT00390000006788.a.b #31 ENSGT00860000135855 ENSGT00940000159907 #32 ENSGT00390000013820 #33 ENSGT00940000154512.a #34 ENSGT01070000253816.a.a.b #35 ENSGT00940000153313.B #36 spretus MODERN SPECIES 5 Sucla2 (MGP_SPRETEiJ_G0020399) #10 Htr2a (MGP_SPRETEiJ_G0020400) #11 Esd (MGP_SPRETEiJ_G0020401) #12 Lrch1 (MGP_SPRETEiJ_G0020402) #13 Rubcnl (MGP_SPRETEiJ_G0020403) Lrrc63 (MGP_SPRETEiJ_G0020404) #14 Lcp1 (MGP_SPRETEiJ_G0020405) #15 Cpb2 (MGP_SPRETEiJ_G0020406) #16 Zc3h13 (MGP_SPRETEiJ_G0020407) MGP_SPRETEiJ_G0020408 Siah3 (MGP_SPRETEiJ_G0020409) #18 Cby2 (MGP_SPRETEiJ_G0020410) #19 MGP_SPRETEiJ_G0020411 Cog3 (MGP_SPRETEiJ_G0020412) #20 Slc25a30 (MGP_SPRETEiJ_G0020413) #21 Tpt1 (MGP_SPRETEiJ_G0020414) #22 Gtf2f2 (MGP_SPRETEiJ_G0020415) #24 Kctd4 (MGP_SPRETEiJ_G0020416) #23 Gpalpp1 (MGP_SPRETEiJ_G0020417) #25 Nufip1 (MGP_SPRETEiJ_G0020418) #26 Tsc22d1 (MGP_SPRETEiJ_G0020419) Serp2 (MGP_SPRETEiJ_G0020420) #28 MGP_SPRETEiJ_G0020421 #29 Ccdc122 (MGP_SPRETEiJ_G0020422) #30 Enox1 (MGP_SPRETEiJ_G0020423) #31 MGP_SPRETEiJ_G0020424 Dnajc15 (MGP_SPRETEiJ_G0020425) #32 Epsti1 (MGP_SPRETEiJ_G0020426) #33 Fam216b (MGP_SPRETEiJ_G0020427) #34 Tnfsf11 (MGP_SPRETEiJ_G0020428) #35 Akap11 (MGP_SPRETEiJ_G0020429) #36 Steppe mouse MODERN SPECIES 2580 ENSMSIG00000020267 #22 ENSMSIG00000020264 Wac (ENSMSIG00000020012) Rat MODERN SPECIES 6 Nudt15 (ENSRNOG00000025239) #9 Sucla2 (ENSRNOG00000017481) #10 Htr2a (ENSRNOG00000010063) #11 Esd (ENSRNOG00000009512) #12 Lrch1 (ENSRNOG00000009412) #13 Rubcnl (ENSRNOG00000022760) Lrrc63 (ENSRNOG00000038291) #14 Esco2-ps2 (ENSRNOG00000029520) Lcp1 (ENSRNOG00000010319) #15 Cpb2 (ENSRNOG00000010935) #16 Zc3h13 (ENSRNOG00000011237) Siah3 (ENSRNOG00000043061) #18 Cby2 (ENSRNOG00000047413) #19 Cog3 (ENSRNOG00000000155) #20 Slc25a30 (ENSRNOG00000001052) #21 Tpt1 (ENSRNOG00000001049) #22 Gtf2f2 (ENSRNOG00000029316) #24 Kctd4 (ENSRNOG00000050996) #23 Gpalpp1 (ENSRNOG00000001037) #25 Nufip1 (ENSRNOG00000001033) #26 ENSRNOG00000070802 Tsc22d1 (ENSRNOG00000001030) Serp2 (ENSRNOG00000038228) #28 Lacc1 (ENSRNOG00000022094) #29 Ccdc122 (ENSRNOG00000042404) #30 Enox1 (ENSRNOG00000047817) #31 Dnajc15 (ENSRNOG00000009063) #32 Epsti1 (ENSRNOG00000009471) #33 Fam216b (ENSRNOG00000021943) #34 Tnfsf11 (ENSRNOG00000071047) #35 Akap11 (ENSRNOG00000009987) #36 Murinae ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.c.b #22 Rat DUPLICATION Rat DUPLICATION Rat DUPLICATION Rat MODERN SPECIES 7 LOC120097482 (ENSRNOG00000065913) LOC102551632 (ENSRNOG00000066408) RGD1559508 (ENSRNOG00000068580) AABR07036505.1 (ENSRNOG00000052647) ENSRNOG00000066563 LOC108353078 (ENSRNOG00000063316) RGD1559508 (ENSRNOG00000056897) Ralgds-ps4 (ENSRNOG00000056463) LOC102552466 (ENSRNOG00000053759) LOC100911649 (ENSRNOG00000022798) RGD1563356 (ENSRNOG00000039624) RGD1562641 (ENSRNOG00000051457) LOC108348376 (ENSRNOG00000063958) LOC102553538 (ENSRNOG00000064031) ENSRNOG00000066183 LOC685718 (ENSRNOG00000030299) #22 Ccser2 (ENSRNOG00000022781) Rgr (ENSRNOG00000012396) Lrit1 (ENSRNOG00000012790) Lrit2 (ENSRNOG00000022726) Cdhr1 (ENSRNOG00000013330) Gpr15lg (ENSRNOG00000043342) Ghitm (ENSRNOG00000013961) LOC100363043 (ENSRNOG00000062457) AABR07006367.1 (ENSRNOG00000005112) LOC120097457 (ENSRNOG00000039601) LOC120097456 (ENSRNOG00000067462) LOC120097423 (ENSRNOG00000065891) LOC120097531 (ENSRNOG00000065076) Eloa2l (ENSRNOG00000066342) Eloa-ps3 (ENSRNOG00000067867) Rat MODERN SPECIES 6 Dnase1l3 (ENSRNOG00000009291) Abhd6 (ENSRNOG00000008167) Rpp14 (ENSRNOG00000039829) Rpp14 (ENSRNOG00000063660) Pxk (ENSRNOG00000008024) Pdhb (ENSRNOG00000007895) AABR07072440.1 (ENSRNOG00000033030) ENSRNOG00000028821 Kctd6 (ENSRNOG00000007817) Acox2 (ENSRNOG00000007378) Fam107a (ENSRNOG00000033261) Fam3d (ENSRNOG00000007320) ENSRNOG00000070952 Cfap20dc (ENSRNOG00000007206) Fhit (ENSRNOG00000064939) Tpt1-ps2 (ENSRNOG00000070732) #22 Ptprg (ENSRNOG00000009419) LOC103693281 (ENSRNOG00000063454) RGD1306063 (ENSRNOG00000039871) Fezf2 (ENSRNOG00000009206) Cadps (ENSRNOG00000008570) ENSRNOG00000068103 Synpr (ENSRNOG00000008203) Sntn (ENSRNOG00000027383) LOC100910341 (ENSRNOG00000070440) RGD1565725 (ENSRNOG00000070977) LOC102550375 (ENSRNOG00000027633) Thoc7 (ENSRNOG00000007701) Atxn7 (ENSRNOG00000007246) Psmd6 (ENSRNOG00000006751) Or2t6 (ENSRNOG00000063635) Rat MODERN SPECIES Ahi1 (ENSRNOG00000013969) Myb (ENSRNOG00000055858) Hbs1l (ENSRNOG00000014531) Aldh8a1 (ENSRNOG00000014907) Themis (ENSRNOG00000014979) ENSRNOG00000062873 Ptprk (ENSRNOG00000047605) ENSRNOG00000069014 Lama2 (ENSRNOG00000011134) AABR07000583.1 (ENSRNOG00000046438) Arhgap18 (ENSRNOG00000011245) LOC120097699 (ENSRNOG00000063903) AABR07004232.1 (ENSRNOG00000048904) L3mbtl3 (ENSRNOG00000011720) Samd3 (ENSRNOG00000039955) LOC100360791 (ENSRNOG00000033517) #22 Tmem200a (ENSRNOG00000047783) Hmgb2-ps6 (ENSRNOG00000026462) ENSRNOG00000067501 Epb41l2 (ENSRNOG00000012346) Akap7 (ENSRNOG00000013202) Ccnb2-ps2 (ENSRNOG00000055111) Arg1 (ENSRNOG00000013304) Med23 (ENSRNOG00000013422) Enpp3 (ENSRNOG00000013791) Enpp1 (ENSRNOG00000013994) Ccn2 (ENSRNOG00000015036) Moxd1 (ENSRNOG00000015321) Stx7 (ENSRNOG00000015670) LOC108349831 (ENSRNOG00000068524) Taar9 (ENSRNOG00000026096) Rat DUPLICATION Rat MODERN SPECIES 17 Olr1877 (ENSRNOG00000070612) Olfr287 (ENSRNOG00000066134) Or10ad1 (ENSRNOG00000064488) Ccdc184 (ENSRNOG00000021945) Asb8 (ENSRNOG00000010099) Pfkm (ENSRNOG00000057988) Senp1 (ENSRNOG00000022260) Col2a1 (ENSRNOG00000058560) Tmem106c (ENSRNOG00000053269) Vdr (ENSRNOG00000054420) Hdac7 (ENSRNOG00000055597) Slc48a1 (ENSRNOG00000053196) Rapgef3 (ENSRNOG00000059961) Endou (ENSRNOG00000056446) Rpap3 (ENSRNOG00000053405) RGD1565798 (ENSRNOG00000002475) #22 Pced1b (ENSRNOG00000022807) Amigo2 (ENSRNOG00000007032) Slc38a4 (ENSRNOG00000006653) Slc38a2 (ENSRNOG00000006305) Slc38a1 (ENSRNOG00000005291) RGD1564963 (ENSRNOG00000069806) Scaf11 (ENSRNOG00000005263) Arid2 (ENSRNOG00000004831) ENSRNOG00000067243 Ano6 (ENSRNOG00000006995) Dbx2 (ENSRNOG00000006885) Nell2 (ENSRNOG00000006235) Tmem117 (ENSRNOG00000006068) ENSRNOG00000064416 Twf1 (ENSRNOG00000022507) Rat MODERN SPECIES 4 Tmem163 (ENSRNOG00000003769) Mgat5 (ENSRNOG00000003614) ENSRNOG00000066401 tuba1c-ps1 (ENSRNOG00000070079) Nckap5 (ENSRNOG00000021553) Lypd1 (ENSRNOG00000003453) Gpr39 (ENSRNOG00000021586) Slc35f5 (ENSRNOG00000003403) LOC100362110 (ENSRNOG00000030481) Actr3 (ENSRNOG00000003206) Dpp10 (ENSRNOG00000002595) LOC103690298 (ENSRNOG00000029868) Htr5b (ENSRNOG00000002549) Ccdc93 (ENSRNOG00000002514) Insig2 (ENSRNOG00000002478) Tpt1-ps1 (ENSRNOG00000069572) #22 En1 (ENSRNOG00000056580) Marco (ENSRNOG00000049303) C1ql2 (ENSRNOG00000046863) Steap3 (ENSRNOG00000049471) C13h2orf76 (ENSRNOG00000045570) Dbi (ENSRNOG00000046889) Tmem37 (ENSRNOG00000047714) Sctr (ENSRNOG00000049766) Cfap221 (ENSRNOG00000056781) Tmem177 (ENSRNOG00000025484) Ptpn4 (ENSRNOG00000002625) Epb41l5 (ENSRNOG00000002538) Tmem185b (ENSRNOG00000067956) Ralb (ENSRNOG00000002440) Inhbb (ENSRNOG00000060237) Mus ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.c.b #22 Mus_A ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.c.b #22 Mus_B ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.c.b #22 Mus_C ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.c.b #22 Steppe mouse MODERN SPECIES 2421 Cd209g (ENSMSIG00000031055) ENSMSIG00000031053 #22 ENSMSIG00000031050 Evi5l (ENSMSIG00000031036) Lrrc8e (ENSMSIG00000031033) Map2k7 (ENSMSIG00000031016) Tgfbr3l (ENSMSIG00000031012) Snapc2 (ENSMSIG00000031008) Ctxn1 (ENSMSIG00000031007) Timm44 (ENSMSIG00000030996) Elavl1 (ENSMSIG00000030993) Ccl25 (ENSMSIG00000030978) Cers4 (ENSMSIG00000030972) Murinae ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.d #22 Mus ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.d #22 Mus_A ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.d #22 Mus_B ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.d #22 Mus_C ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.b.d #22 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 41 Foxa2 (ENSMSIG00000002945) Sstr4 (ENSMSIG00000002973) Thbd (ENSMSIG00000002989) Cd93 (ENSMSIG00000002996) ENSMSIG00000003019 #22 Nxt1 (ENSMSIG00000003067) Gzf1 (ENSMSIG00000003080) Napb (ENSMSIG00000003094) Cstl1 (ENSMSIG00000003118) Cst11 (ENSMSIG00000003137) Cstdc1 (ENSMSIG00000003153) Cst12 (ENSMSIG00000003169) Cst8 (ENSMSIG00000003194) Cst13 (ENSMSIG00000003223) Cst9 (ENSMSIG00000003261) Cstdc2 (ENSMSIG00000003283) Cst3 (ENSMSIG00000003295) Steppe mouse MODERN SPECIES 2804 Msantd2 (ENSMSIG00000015172) Esam (ENSMSIG00000015194) Vsig2 (ENSMSIG00000015220) Nrgn (ENSMSIG00000015277) Spa17 (ENSMSIG00000015289) Siae (ENSMSIG00000015296) Tbrg1 (ENSMSIG00000015383) Panx3 (ENSMSIG00000015407) ENSMSIG00000015418 #22 Or8a1 (ENSMSIG00000015428) Or8a1b (ENSMSIG00000015433) Or8b12 (ENSMSIG00000015446) Or8b12c (ENSMSIG00000015455) Or8b9 (ENSMSIG00000015471) Or8b8 (ENSMSIG00000015480) Or8b4 (ENSMSIG00000015494) Or8b35 (ENSMSIG00000015505) Or8b36 (ENSMSIG00000015512) Or8b37 (ENSMSIG00000015522) Or8b39 (ENSMSIG00000015543) Or8b101 (ENSMSIG00000015560) Or8b40 (ENSMSIG00000015567) Or8b41 (ENSMSIG00000015572) ENSMSIG00000015593 Shrew mouse MODERN SPECIES 21 MGP_PahariEiJ_G0030521 #9 Sucla2 (MGP_PahariEiJ_G0030522) #10 Htr2a (MGP_PahariEiJ_G0030523) #11 Esd (MGP_PahariEiJ_G0030524) #12 Lrch1 (MGP_PahariEiJ_G0030525) #13 Rubcnl (MGP_PahariEiJ_G0030526) Lrrc63 (MGP_PahariEiJ_G0030527) #14 Lcp1 (MGP_PahariEiJ_G0030528) #15 Cpb2 (MGP_PahariEiJ_G0030529) #16 Zc3h13 (MGP_PahariEiJ_G0030530) Siah3 (MGP_PahariEiJ_G0030531) #18 Cby2 (MGP_PahariEiJ_G0030532) #19 MGP_PahariEiJ_G0030533 Cog3 (MGP_PahariEiJ_G0030534) #20 Slc25a30 (MGP_PahariEiJ_G0030535) #21 Tpt1 (MGP_PahariEiJ_G0030536) #22 Gtf2f2 (MGP_PahariEiJ_G0030537) #24 Kctd4 (MGP_PahariEiJ_G0030538) #23 Gpalpp1 (MGP_PahariEiJ_G0030539) #25 Nufip1 (MGP_PahariEiJ_G0030540) #26 Tsc22d1 (MGP_PahariEiJ_G0030541) Serp2 (MGP_PahariEiJ_G0030542) #28 Lacc1 (MGP_PahariEiJ_G0030543) #29 Ccdc122 (MGP_PahariEiJ_G0030544) #30 Enox1 (MGP_PahariEiJ_G0030545) #31 MGP_PahariEiJ_G0030546 Dnajc15 (MGP_PahariEiJ_G0030547) #32 Epsti1 (MGP_PahariEiJ_G0030548) #33 Fam216b (MGP_PahariEiJ_G0030549) #34 Tnfsf11 (MGP_PahariEiJ_G0030550) #35 Akap11 (MGP_PahariEiJ_G0030551) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 390 Cog3 (ENSNGAG00000011423) #20 Slc25a30 (ENSNGAG00000006726) #21 Tpt1 (ENSNGAG00000002203) #22 ENSNGAG00000001072 Kctd4 (ENSNGAG00000000924) #23 Gtf2f2 (ENSNGAG00000012083) #24 Gpalpp1 (ENSNGAG00000011284) #25 Nufip1 (ENSNGAG00000010233) #26 Tsc22d1 (ENSNGAG00000008524) ENSNGAG00000008318 #27 Serp2 (ENSNGAG00000007577) #28 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 349 ENSJJAG00000000293 #22 Lesser Egyptian jerboa MODERN SPECIES 104 Ndufaf4 (ENSJJAG00000023657) Gpr63 (ENSJJAG00000013298) Fhl5 (ENSJJAG00000000636) Ufl1 (ENSJJAG00000006182) ENSJJAG00000010016 ENSJJAG00000013253 Fut9 (ENSJJAG00000022594) ENSJJAG00000023083 Manea (ENSJJAG00000023182) ENSJJAG00000023315 ENSJJAG00000023379 Epha7 (ENSJJAG00000016879) ENSJJAG00000017184 ENSJJAG00000017512 ENSJJAG00000017791 ENSJJAG00000017896 #22 ENSJJAG00000018137 ENSJJAG00000018365 Map3k7 (ENSJJAG00000020494) ENSJJAG00000013324 Bach2 (ENSJJAG00000002786) Gja10 (ENSJJAG00000006111) ENSJJAG00000009996 ENSJJAG00000010339 Mdn1 (ENSJJAG00000015545) Lyrm2 (ENSJJAG00000020170) Ankrd6 (ENSJJAG00000021174) ENSJJAG00000022275 Rragd (ENSJJAG00000000282) ENSJJAG00000000713 Gabrr2 (ENSJJAG00000001074) Lesser Egyptian jerboa MODERN SPECIES 25 ENSJJAG00000011543 #22 Myomorpha ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.a ##22 Cricetidae_B ANCESTRAL SPECIES ENSGT00390000006051.a.b.b.c.a ##22 Prairie vole MODERN SPECIES 4 Med4 (ENSMOCG00000002608) #8 Nudt15 (ENSMOCG00000003875) #9 ENSMOCG00000011477 #10 Htr2a (ENSMOCG00000012645) #11 ENSMOCG00000016070 #12 Lrch1 (ENSMOCG00000017560) #13 Rubcnl (ENSMOCG00000003331) Lrrc63 (ENSMOCG00000018528) #14 Lcp1 (ENSMOCG00000010746) #15 Cpb2 (ENSMOCG00000006393) #16 ENSMOCG00000001346 Siah3 (ENSMOCG00000009347) #18 Cby2 (ENSMOCG00000014959) #19 Cog3 (ENSMOCG00000002598) #20 Slc25a30 (ENSMOCG00000010410) #21 ENSMOCG00000016698 ##22 Gtf2f2 (ENSMOCG00000020515) #24 Kctd4 (ENSMOCG00000008795) #23 ENSMOCG00000009812 ##25 Nufip1 (ENSMOCG00000008223) #26 ENSMOCG00000018072 #27 Serp2 (ENSMOCG00000022234) #28 Lacc1 (ENSMOCG00000011112) #29 Enox1 (ENSMOCG00000012930) #31 ENSMOCG00000014539 Slitrk1 (ENSMOCG00000008123) ENSMOCG00000017655 ENSMOCG00000007797 ENSMOCG00000005944 Slitrk6 (ENSMOCG00000013923) ENSMOCG00000017964 Northern American deer mouse MODERN SPECIES 17 Adra2b (ENSPEMG00000007923) Gpat2 (ENSPEMG00000008852) Fahd2a (ENSPEMG00000000091) Kcnip3 (ENSPEMG00000021898) Prom2 (ENSPEMG00000000045) ENSPEMG00000027287 Zfp661 (ENSPEMG00000010394) Mrps5 (ENSPEMG00000012667) Mal (ENSPEMG00000009328) Mall (ENSPEMG00000029281) Nphp1 (ENSPEMG00000021264) Mtln (ENSPEMG00000027381) Bub1 (ENSPEMG00000021304) Acoxl (ENSPEMG00000009101) Bcl2l11 (ENSPEMG00000029663) ENSPEMG00000021203 ##22 Spdye4c (ENSPEMG00000017180) Anapc1 (ENSPEMG00000029252) Mertk (ENSPEMG00000002990) Tmem87b (ENSPEMG00000001091) Fbln7 (ENSPEMG00000010454) Zc3h8 (ENSPEMG00000011068) Zc3h6 (ENSPEMG00000000918) Vinac1 (ENSPEMG00000004724) Ttl (ENSPEMG00000006748) Polr1b (ENSPEMG00000008619) Chchd5 (ENSPEMG00000010023) Slc20a1 (ENSPEMG00000010382) Ckap2l (ENSPEMG00000010844) Il1a (ENSPEMG00000011300) Il1b (ENSPEMG00000011618) Lesser Egyptian jerboa MODERN SPECIES 126 ENSJJAG00000012033 ENSJJAG00000006493 Htr2a (ENSJJAG00000005538) #11 Esd (ENSJJAG00000004979) #12 Lrch1 (ENSJJAG00000000346) #13 Rubcnl (ENSJJAG00000021497) Lcp1 (ENSJJAG00000021331) #15 Cpb2 (ENSJJAG00000020705) #16 Zc3h13 (ENSJJAG00000019971) ENSJJAG00000019522 Siah3 (ENSJJAG00000019440) #18 Cby2 (ENSJJAG00000019147) #19 Cog3 (ENSJJAG00000018271) #20 Slc25a30 (ENSJJAG00000017335) #21 ENSJJAG00000016940 ENSJJAG00000016541 ##22 Kctd4 (ENSJJAG00000012151) #23 Gtf2f2 (ENSJJAG00000015891) #24 Gpalpp1 (ENSJJAG00000015544) #25 Nufip1 (ENSJJAG00000015369) #26 ENSJJAG00000015078 #27 Serp2 (ENSJJAG00000021557) #28 ENSJJAG00000021469 Lacc1 (ENSJJAG00000021351) #29 Ccdc122 (ENSJJAG00000021044) #30