Fungi/Metazoa group	ANCESTRAL SPECIES																	ENSGT00530000063405 #22
Bilateria	DUPLICATION
Bilateria	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Chordata	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Gnathostomata	ANCESTRAL SPECIES	923															ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23
Euteleostomi	ANCESTRAL SPECIES	475											ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23
Sarcopterygii	ANCESTRAL SPECIES	57	ENSGT00940000167064	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23
Tetrapoda	ANCESTRAL SPECIES	83	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23
Amniota	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Mammalia	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Theria	ANCESTRAL SPECIES	15	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B	ENSGT01040000240383.b.a.b
Eutheria	ANCESTRAL SPECIES	3	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Boreoeutheria	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Euarchontoglires	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Euarchontoglires_A	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Glires	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Rodentia	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Hystricomorpha	ANCESTRAL SPECIES	5	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.f #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564
Naked mole-rat female	MODERN SPECIES	24	ETS1 (ENSHGLG00000009624) #7	KIRREL3 (ENSHGLG00000006857) #8	ST3GAL4 (ENSHGLG00000046104) #9	DCPS (ENSHGLG00000041279) #10	TIRAP (ENSHGLG00000032073) #11	FOXRED1 (ENSHGLG00000044040) #12	ENSHGLG00000001597 #13	FAM118B (ENSHGLG00000000409) #14	RPUSD4 (ENSHGLG00000002285) #15	ENSHGLG00000041999 #16	CDON (ENSHGLG00000001508) #17	DDX25 (ENSHGLG00000000748) #18	ENSHGLG00000000565 #19	HYLS1 (ENSHGLG00000032168) #20	GRIK4 (ENSHGLG00000001757) #21	TBCEL (ENSHGLG00000040222) #22	TECTA (ENSHGLG00000001489) #23	SC5D (ENSHGLG00000044088) #24	SORL1 (ENSHGLG00000001265) #25	ENSHGLG00000037002 #26	ENSHGLG00000045413 #27	ENSHGLG00000034719 #28	UBASH3B (ENSHGLG00000001126) #29	CRTAM (ENSHGLG00000002032) #30	JHY (ENSHGLG00000001981) #31	BSX (ENSHGLG00000042535) #32	ENSHGLG00000001884 #33	CLMP (ENSHGLG00000001841) #34	ENSHGLG00000032791 #35	GRAMD1B (ENSHGLG00000001139) #36	SCN3B (ENSHGLG00000038916) #37
Hystricomorpha_a	ANCESTRAL SPECIES	10	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.f #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564
Guinea pig	MODERN SPECIES	19	CBL (ENSCPOG00000001063)	MCAM (ENSCPOG00000026038)	RNF26 (ENSCPOG00000004509)	C1QTNF5 (ENSCPOG00000032489)	MFRP (ENSCPOG00000004515)	USP2 (ENSCPOG00000004520)	THY1 (ENSCPOG00000012275)	ENSCPOG00000022924	NECTIN1 (ENSCPOG00000001254)	TRIM29 (ENSCPOG00000005979)	OAF (ENSCPOG00000037745)	POU2F3 (ENSCPOG00000010476)	TLCD5 (ENSCPOG00000037960)	ARHGEF12 (ENSCPOG00000010479)	GRIK4 (ENSCPOG00000002918) #21	TBCEL (ENSCPOG00000009932) #22	TECTA (ENSCPOG00000012043) #23	SC5D (ENSCPOG00000032720) #24	SORL1 (ENSCPOG00000015350) #25	UBASH3B (ENSCPOG00000002154) #29	CRTAM (ENSCPOG00000002159) #30	JHY (ENSCPOG00000002163) #31	BSX (ENSCPOG00000002164) #32	ENSCPOG00000004169 #33	CLMP (ENSCPOG00000004171) #34	GRAMD1B (ENSCPOG00000014646) #36	SCN3B (ENSCPOG00000038561) #37	ZNF202 (ENSCPOG00000007108)	OR6X1 (ENSCPOG00000027255)	OR6M1 (ENSCPOG00000015580)	OR8D4 (ENSCPOG00000021878)
Hystricomorpha_b	ANCESTRAL SPECIES	23	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.f #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564
Degu	MODERN SPECIES	121	ENSODEG00000007290	MCAM (ENSODEG00000008067)	RNF26 (ENSODEG00000007188)	C1QTNF5 (ENSODEG00000006895)	MFRP (ENSODEG00000007223)	ENSODEG00000008794	THY1 (ENSODEG00000008554)	ENSODEG00000006811	NECTIN1 (ENSODEG00000006611)	TRIM29 (ENSODEG00000008046)	OAF (ENSODEG00000007327)	POU2F3 (ENSODEG00000006896)	ENSODEG00000008437	ARHGEF12 (ENSODEG00000006885)	GRIK4 (ENSODEG00000006186) #21	TBCEL (ENSODEG00000005962) #22	TECTA (ENSODEG00000008800) #23	SC5D (ENSODEG00000010056) #24	SORL1 (ENSODEG00000006848) #25	UBASH3B (ENSODEG00000006578) #29	CRTAM (ENSODEG00000006736) #30	JHY (ENSODEG00000005965) #31	BSX (ENSODEG00000006223) #32	ENSODEG00000006143 ##33	CLMP (ENSODEG00000007944) #34	GRAMD1B (ENSODEG00000006791) #36	SCN3B (ENSODEG00000006996) #37	ENSODEG00000019374	OR6X1 (ENSODEG00000019428)	ENSODEG00000019404	OR8D4 (ENSODEG00000019380)
Long-tailed chinchilla	MODERN SPECIES	119	CBL (ENSCLAG00000015904)	MCAM (ENSCLAG00000016437)	C1QTNF5 (ENSCLAG00000013955)	RNF26 (ENSCLAG00000017073)	MFRP (ENSCLAG00000015767)	USP2 (ENSCLAG00000013003)	THY1 (ENSCLAG00000013561)	ENSCLAG00000012333	NECTIN1 (ENSCLAG00000012784)	TRIM29 (ENSCLAG00000015449)	OAF (ENSCLAG00000014022)	POU2F3 (ENSCLAG00000014931)	TLCD5 (ENSCLAG00000016010)	ARHGEF12 (ENSCLAG00000013240)	GRIK4 (ENSCLAG00000013746) #21	TBCEL (ENSCLAG00000012858) #22	TECTA (ENSCLAG00000015701) #23	ENSCLAG00000014057	SC5D (ENSCLAG00000014644) #24	SORL1 (ENSCLAG00000015040) #25	UBASH3B (ENSCLAG00000015024) #29	CRTAM (ENSCLAG00000013885) #30	JHY (ENSCLAG00000015081) #31	BSX (ENSCLAG00000013667) #32	ENSCLAG00000014646 #33	CLMP (ENSCLAG00000014572) #34	ENSCLAG00000017781	GRAMD1B (ENSCLAG00000014358) #36	SCN3B (ENSCLAG00000016441) #37	ZNF202 (ENSCLAG00000016331)	OR6X1 (ENSCLAG00000018065)
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Marmotini	ANCESTRAL SPECIES	20	ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584.o	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Alpin marmot	MODERN SPECIES	25	CCDC153 (ENSMMMG00000022391)	CBL (ENSMMMG00000022366)	MCAM (ENSMMMG00000022337)	ENSMMMG00000022331	C1QTNF5 (ENSMMMG00000022321)	MFRP (ENSMMMG00000022302)	USP2 (ENSMMMG00000022252)	THY1 (ENSMMMG00000022247)	NECTIN1 (ENSMMMG00000022229)	TRIM29 (ENSMMMG00000022209)	OAF (ENSMMMG00000022206)	POU2F3 (ENSMMMG00000022201)	TLCD5 (ENSMMMG00000022200)	ENSMMMG00000022179	GRIK4 (ENSMMMG00000022153) #21	TBCEL (ENSMMMG00000022111) #22	TECTA (ENSMMMG00000022096) #23	SC5D (ENSMMMG00000022092) #24	SORL1 (ENSMMMG00000022068) #25	ENSMMMG00000022058	UBASH3B (ENSMMMG00000022045) #29	CRTAM (ENSMMMG00000022027) #30	JHY (ENSMMMG00000022018) #31	BSX (ENSMMMG00000022013) #32	ENSMMMG00000022001 #33	CLMP (ENSMMMG00000021995) #34	GRAMD1B (ENSMMMG00000021944) #36	SCN3B (ENSMMMG00000021929) #37	ZNF202 (ENSMMMG00000021920)	OR6X1 (ENSMMMG00000021917)	OR6M1 (ENSMMMG00000021914)
Marmotini_b	ANCESTRAL SPECIES	43	ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584.o	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564
Arctic ground squirrel	MODERN SPECIES	291	CBL (ENSUPAG00010018560)	ENSUPAG00010018655	MCAM (ENSUPAG00010018664)	ENSUPAG00010018736	C1QTNF5 (ENSUPAG00010018740)	MFRP (ENSUPAG00010018750)	USP2 (ENSUPAG00010018785)	THY1 (ENSUPAG00010018968)	NECTIN1 (ENSUPAG00010018985)	TRIM29 (ENSUPAG00010018992)	OAF (ENSUPAG00010019004)	POU2F3 (ENSUPAG00010019015)	TLCD5 (ENSUPAG00010019046)	ARHGEF12 (ENSUPAG00010019053)	GRIK4 (ENSUPAG00010019127) #21	TBCEL (ENSUPAG00010019167) #22	TECTA (ENSUPAG00010019193) #23	SC5D (ENSUPAG00010019233) #24	SORL1 (ENSUPAG00010019264) #25
Squirrel	MODERN SPECIES	142	CCDC153 (ENSSTOG00000014500)	CBL (ENSSTOG00000005298)	MCAM (ENSSTOG00000019932)	ENSSTOG00000026036	C1QTNF5 (ENSSTOG00000022915)	MFRP (ENSSTOG00000005406)	USP2 (ENSSTOG00000005428)	THY1 (ENSSTOG00000005455)	NECTIN1 (ENSSTOG00000029172)	TRIM29 (ENSSTOG00000001978)	OAF (ENSSTOG00000026759)	POU2F3 (ENSSTOG00000015839)	TLCD5 (ENSSTOG00000022791)	ARHGEF12 (ENSSTOG00000015856)	GRIK4 (ENSSTOG00000015883) #21	TBCEL (ENSSTOG00000015896) #22	TECTA (ENSSTOG00000009622) #23	SC5D (ENSSTOG00000008946) #24	SORL1 (ENSSTOG00000003552) #25	ENSSTOG00000020141	UBASH3B (ENSSTOG00000006728) #29	JHY (ENSSTOG00000022876) #31	BSX (ENSSTOG00000021809) #32	ENSSTOG00000003756 #33	CLMP (ENSSTOG00000003773) #34	ENSSTOG00000027106 #36	GRAMD1B (ENSSTOG00000016452) #36	SCN3B (ENSSTOG00000016456) #37	ZNF202 (ENSSTOG00000027536)	OR6X1 (ENSSTOG00000026454)	OR6M1 (ENSSTOG00000023615)
Eurasian red squirrel	MODERN SPECIES	2	ENSSVLG00005016282	MCAM (ENSSVLG00005016303)	RNF26 (ENSSVLG00005016333)	C1QTNF5 (ENSSVLG00005016350)	MFRP (ENSSVLG00005016384)	USP2 (ENSSVLG00005016536)	THY1 (ENSSVLG00005016800)	ENSSVLG00005016845	NECTIN1 (ENSSVLG00005016885)	TRIM29 (ENSSVLG00005016988)	OAF (ENSSVLG00005017300)	POU2F3 (ENSSVLG00005017350)	TLCD5 (ENSSVLG00005017509)	ARHGEF12 (ENSSVLG00005017668)	GRIK4 (ENSSVLG00005017812) #21	TBCEL (ENSSVLG00005018006) #22	TECTA (ENSSVLG00005018068) #23	SC5D (ENSSVLG00005018507) #24	SORL1 (ENSSVLG00005018596) #25	UBASH3B (ENSSVLG00005019548) #29	CRTAM (ENSSVLG00005019670) #30	JHY (ENSSVLG00005019812) #31	BSX (ENSSVLG00005019921) #32	ENSSVLG00005019956	ENSSVLG00005020047 #33	CLMP (ENSSVLG00005020407) #34	GRAMD1B (ENSSVLG00005020589) #36	SCN3B (ENSSVLG00005021934) #37	ZNF202 (ENSSVLG00005022010)	OR6X1 (ENSSVLG00005022093)	OR6M1 (ENSSVLG00005022115)
Rodentia_B	ANCESTRAL SPECIES	23	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Myomorpha	ANCESTRAL SPECIES	23	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Muroidea	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Chinese hamster chok1gshd	MODERN SPECIES	284	Cbl (ENSCGRG00001019559)	Mcam (ENSCGRG00001014043)	ENSCGRG00001005426	C1qtnf5 (ENSCGRG00001016723)	Mfrp (ENSCGRG00001017647)	Usp2 (ENSCGRG00001016286)	Thy1 (ENSCGRG00001001406)	ENSCGRG00001011094	Nectin1 (ENSCGRG00001008640)	Trim29 (ENSCGRG00001014242)	Oaf (ENSCGRG00001018323)	Pou2f3 (ENSCGRG00001012087)	Tlcd5 (ENSCGRG00001014506)	Arhgef12 (ENSCGRG00001003759)	Grik4 (ENSCGRG00001023572) #21	Tbcel (ENSCGRG00001001381) #22	Tecta (ENSCGRG00001023887) #23	Sc5d (ENSCGRG00001019376) #24	Sorl1 (ENSCGRG00001006014) #25	Ubash3b (ENSCGRG00001023441) #29	Crtam (ENSCGRG00001024613) #30	Jhy (ENSCGRG00001019158) #31	Bsx (ENSCGRG00001010422) #32
Golden Hamster	MODERN SPECIES	635	Ccdc153 (ENSMAUG00000008442)	ENSMAUG00000022099	Mcam (ENSMAUG00000018109)	C1qtnf5 (ENSMAUG00000002647)	Mfrp (ENSMAUG00000019232)	ENSMAUG00000021537	Thy1 (ENSMAUG00000012348)	Nectin1 (ENSMAUG00000008955)	Trim29 (ENSMAUG00000016385)	Oaf (ENSMAUG00000010047)	ENSMAUG00000010627	Pou2f3 (ENSMAUG00000016359)	Tlcd5 (ENSMAUG00000018827)	Arhgef12 (ENSMAUG00000013007)	Grik4 (ENSMAUG00000012098) #21	Tbcel (ENSMAUG00000021001) #22	Tecta (ENSMAUG00000021166) #23	Sc5d (ENSMAUG00000014340) #24	Sorl1 (ENSMAUG00000014163) #25	Ubash3b (ENSMAUG00000003703) #29	Crtam (ENSMAUG00000010485) #30	Jhy (ENSMAUG00000013429) #31	Bsx (ENSMAUG00000019955) #32	Hspa8 (ENSMAUG00000012651) ##33	Clmp (ENSMAUG00000021491) #34	Gramd1b (ENSMAUG00000011877) #36	Scn3b (ENSMAUG00000013392) #37	ENSMAUG00000009397	Or6x1 (ENSMAUG00000009065)	Tmem225 (ENSMAUG00000018342)	Or8d4 (ENSMAUG00000009232)
Cricetidae_B	ANCESTRAL SPECIES	16	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Northern American deer mouse	MODERN SPECIES	20	Nherf4 (ENSPEMG00000017700)	Ccdc153 (ENSPEMG00000007870)	Cbl (ENSPEMG00000023847)	Mcam (ENSPEMG00000003786)	C1qtnf5 (ENSPEMG00000010725)	Mfrp (ENSPEMG00000017956)	Usp2 (ENSPEMG00000024068)	Thy1 (ENSPEMG00000025576)	Nectin1 (ENSPEMG00000000009)	Trim29 (ENSPEMG00000020223)	Oaf (ENSPEMG00000019857)	Pou2f3 (ENSPEMG00000017517)	Tlcd5 (ENSPEMG00000028823)	Arhgef12 (ENSPEMG00000004297)	Grik4 (ENSPEMG00000019743) #21	Tbcel (ENSPEMG00000019830) #22	Tecta (ENSPEMG00000019833) #23	Sc5d (ENSPEMG00000019479) #24	Sorl1 (ENSPEMG00000020008) #25	ENSPEMG00000030566	ENSPEMG00000012971	Ubash3b (ENSPEMG00000020009) #29	Crtam (ENSPEMG00000020104) #30	Jhy (ENSPEMG00000019964) #31	Bsx (ENSPEMG00000019624) #32	Hspa8 (ENSPEMG00000019570) ##33	Clmp (ENSPEMG00000000129) #34	Gramd1b (ENSPEMG00000006423) #36	Scn3b (ENSPEMG00000028495) #37	Zfp202 (ENSPEMG00000012772)	Or6x1 (ENSPEMG00000012780)
Prairie vole	MODERN SPECIES	13	Ccdc153 (ENSMOCG00000016546)	Cbl (ENSMOCG00000008619)	Mcam (ENSMOCG00000020037)	C1qtnf5 (ENSMOCG00000016995)	Mfrp (ENSMOCG00000021315)	Usp2 (ENSMOCG00000011563)	Thy1 (ENSMOCG00000000954)	ENSMOCG00000012324	Nectin1 (ENSMOCG00000005304)	Trim29 (ENSMOCG00000005539)	Oaf (ENSMOCG00000018469)	Pou2f3 (ENSMOCG00000015293)	Tlcd5 (ENSMOCG00000015604)	Arhgef12 (ENSMOCG00000022529)	Grik4 (ENSMOCG00000022422) #21	Tbcel (ENSMOCG00000012495) #22	Tecta (ENSMOCG00000007372) #23	Sc5d (ENSMOCG00000012716) #24	Sorl1 (ENSMOCG00000009449) #25	Ubash3b (ENSMOCG00000008480) #29	Crtam (ENSMOCG00000012290) #30	Jhy (ENSMOCG00000018657) #31	Bsx (ENSMOCG00000017866) #32	Hspa8 (ENSMOCG00000012873) ##33	Clmp (ENSMOCG00000008613) #34	ENSMOCG00000006783	ENSMOCG00000017933	Gramd1b (ENSMOCG00000012512) #36	Scn3b (ENSMOCG00000005991) #37	ENSMOCG00000006381	Or6x1 (ENSMOCG00000007071)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Mus	ANCESTRAL SPECIES	4	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00900000143378	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00900000143378	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00900000143378	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564	ENSGT01040000240383.b.a.b
Mouse	MODERN SPECIES	18	Cbl (ENSMUSG00000034342)	Mcam (ENSMUSG00000032135)	C1qtnf5 (ENSMUSG00000079592)	Mfrp (ENSMUSG00000034739)	Rnf26 (ENSMUSG00000053128)	Usp2 (ENSMUSG00000032010)	Gm49380 (ENSMUSG00000111409)	Thy1 (ENSMUSG00000032011)	Nectin1 (ENSMUSG00000032012)	Trim29 (ENSMUSG00000032013)	Oaf (ENSMUSG00000032014)	Pou2f3 (ENSMUSG00000032015)	Tlcd5 (ENSMUSG00000048503)	Arhgef12 (ENSMUSG00000059495)	Grik4 (ENSMUSG00000032017) #21	Tbcel (ENSMUSG00000037287) #22	Tecta (ENSMUSG00000037705) #23	Sc5d (ENSMUSG00000032018) #24	Sorl1 (ENSMUSG00000049313) #25	Ubash3b (ENSMUSG00000032020) #29	Crtam (ENSMUSG00000032021) #30	Jhy (ENSMUSG00000032023) #31	Bsx (ENSMUSG00000054360) #32	Hspa8 (ENSMUSG00000015656) ##33	Clmp (ENSMUSG00000032024) #34	Gramd1b (ENSMUSG00000040111) #36	Scn3b (ENSMUSG00000049281) #37	Zfp202 (ENSMUSG00000025602)	Or6x1 (ENSMUSG00000051095)	Tmem225 (ENSMUSG00000040541)	Or8d4 (ENSMUSG00000049073)
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00900000143378	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT01090000260664.b	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564
Steppe mouse	MODERN SPECIES	3184															ENSMSIG00000019202 #21	Tbcel (ENSMSIG00000019035) #22	Tecta (ENSMSIG00000018925) #23	ENSMSIG00000018914	Sc5d (ENSMSIG00000018892) #24	Sorl1 (ENSMSIG00000018706) #25	Ubash3b (ENSMSIG00000018629) #29	Crtam (ENSMSIG00000018539) #30	Jhy (ENSMSIG00000018525) #31	Bsx (ENSMSIG00000018506) #32	Hspa8 (ENSMSIG00000018401) ##33	Clmp (ENSMSIG00000018379) #34	ENSMSIG00000018372	ENSMSIG00000018352	Gramd1b (ENSMSIG00000018149) #36	Scn3b (ENSMSIG00000018041) #37	Zfp202 (ENSMSIG00000017972)
spretus	MODERN SPECIES	18	Cbl (MGP_SPRETEiJ_G0033239)	Mcam (MGP_SPRETEiJ_G0033238)	C1qtnf5 (MGP_SPRETEiJ_G0033237)	Mfrp (MGP_SPRETEiJ_G0033236)	Usp2 (MGP_SPRETEiJ_G0033235)	Thy1 (MGP_SPRETEiJ_G0033234)	MGP_SPRETEiJ_G0033233	Nectin1 (MGP_SPRETEiJ_G0033232)	Trim29 (MGP_SPRETEiJ_G0033231)	MGP_SPRETEiJ_G0033230	Oaf (MGP_SPRETEiJ_G0033229)	Pou2f3 (MGP_SPRETEiJ_G0033228)	Tlcd5 (MGP_SPRETEiJ_G0033227)	Arhgef12 (MGP_SPRETEiJ_G0033226)	Grik4 (MGP_SPRETEiJ_G0033225) #21	Tbcel (MGP_SPRETEiJ_G0033224) #22	Tecta (MGP_SPRETEiJ_G0033223) #23	Sc5d (MGP_SPRETEiJ_G0033222) #24	Sorl1 (MGP_SPRETEiJ_G0033221) #25	Ubash3b (MGP_SPRETEiJ_G0033220) #29	Crtam (MGP_SPRETEiJ_G0033219) #30	MGP_SPRETEiJ_G0033218	Bsx (MGP_SPRETEiJ_G0033217) #32	MGP_SPRETEiJ_G0033216 ##33	Clmp (MGP_SPRETEiJ_G0033215) #34	MGP_SPRETEiJ_G0033214	Gramd1b (MGP_SPRETEiJ_G0033213) #36	Scn3b (MGP_SPRETEiJ_G0033212) #37	Zfp202 (MGP_SPRETEiJ_G0033211)	Or6x1 (MGP_SPRETEiJ_G0033210)	Tmem225 (MGP_SPRETEiJ_G0033209)
Ryukyu mouse	MODERN SPECIES	18	MGP_CAROLIEiJ_G0032100	C1qtnf5 (MGP_CAROLIEiJ_G0032099)	Mfrp (MGP_CAROLIEiJ_G0032098)	Usp2 (MGP_CAROLIEiJ_G0032097)	MGP_CAROLIEiJ_G0032096	Thy1 (MGP_CAROLIEiJ_G0032095)	MGP_CAROLIEiJ_G0032094	Nectin1 (MGP_CAROLIEiJ_G0032093)	Trim29 (MGP_CAROLIEiJ_G0032092)	MGP_CAROLIEiJ_G0032091	Oaf (MGP_CAROLIEiJ_G0032090)	Pou2f3 (MGP_CAROLIEiJ_G0032089)	Tlcd5 (MGP_CAROLIEiJ_G0032088)	Arhgef12 (MGP_CAROLIEiJ_G0032087)	Grik4 (MGP_CAROLIEiJ_G0032086) #21	Tbcel (MGP_CAROLIEiJ_G0032085) #22	Tecta (MGP_CAROLIEiJ_G0032084) #23	Sc5d (MGP_CAROLIEiJ_G0032083) #24	Sorl1 (MGP_CAROLIEiJ_G0032082) #25	Ubash3b (MGP_CAROLIEiJ_G0032081) #29	Crtam (MGP_CAROLIEiJ_G0032080) #30	Jhy (MGP_CAROLIEiJ_G0032079) #31	Bsx (MGP_CAROLIEiJ_G0032078) #32	Clmp (MGP_CAROLIEiJ_G0032077) #34	MGP_CAROLIEiJ_G0032076	MGP_CAROLIEiJ_G0032075	Gramd1b (MGP_CAROLIEiJ_G0032074) #36	Scn3b (MGP_CAROLIEiJ_G0032073) #37	Zfp202 (MGP_CAROLIEiJ_G0032072)	Or6x1 (MGP_CAROLIEiJ_G0032071)	Tmem225 (MGP_CAROLIEiJ_G0032070)
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0014969	C1qtnf5 (MGP_PahariEiJ_G0014968)	Mfrp (MGP_PahariEiJ_G0014967)	Usp2 (MGP_PahariEiJ_G0014966)	MGP_PahariEiJ_G0014965	Thy1 (MGP_PahariEiJ_G0014964)	MGP_PahariEiJ_G0014963	Nectin1 (MGP_PahariEiJ_G0014962)	Trim29 (MGP_PahariEiJ_G0014961)	MGP_PahariEiJ_G0014960	Oaf (MGP_PahariEiJ_G0014959)	Pou2f3 (MGP_PahariEiJ_G0014958)	Tlcd5 (MGP_PahariEiJ_G0014957)	Arhgef12 (MGP_PahariEiJ_G0014956)	Grik4 (MGP_PahariEiJ_G0014955) #21	Tbcel (MGP_PahariEiJ_G0014954) #22	Tecta (MGP_PahariEiJ_G0014953) #23	Sc5d (MGP_PahariEiJ_G0014952) #24	Sorl1 (MGP_PahariEiJ_G0014951) #25	Ubash3b (MGP_PahariEiJ_G0014950) #29	Crtam (MGP_PahariEiJ_G0014949) #30	Jhy (MGP_PahariEiJ_G0014948) #31	Bsx (MGP_PahariEiJ_G0014947) #32	Hspa8 (MGP_PahariEiJ_G0014946) ##33	Clmp (MGP_PahariEiJ_G0014945) #34	MGP_PahariEiJ_G0014944	Gramd1b (MGP_PahariEiJ_G0014943) #36	Scn3b (MGP_PahariEiJ_G0014942) #37	Zfp202 (MGP_PahariEiJ_G0014941)	Or6x1 (MGP_PahariEiJ_G0014940)	Tmem225 (MGP_PahariEiJ_G0014939)
Rat	MODERN SPECIES	18	Nherf4 (ENSRNOG00000008526)	Ccdc153 (ENSRNOG00000039086)	Cbl (ENSRNOG00000008444)	Mcam (ENSRNOG00000007726)	C1qtnf5 (ENSRNOG00000007613)	Mfrp (ENSRNOG00000039107)	Usp2 (ENSRNOG00000006663)	Thy1 (ENSRNOG00000006604)	Nectin1 (ENSRNOG00000006403)	Trim29 (ENSRNOG00000021771)	Oaf (ENSRNOG00000009243)	Pou2f3 (ENSRNOG00000009118)	Tlcd5 (ENSRNOG00000021793)	Arhgef12 (ENSRNOG00000008924)	Grik4 (ENSRNOG00000030910) #21	Tbcel (ENSRNOG00000032364) #22	Tecta (ENSRNOG00000031126) #23	Sc5d (ENSRNOG00000065944) #24	Sorl1 (ENSRNOG00000064634) #25	LOC120094123 (ENSRNOG00000064399)	AABR07070043.1 (ENSRNOG00000050630)	Ubash3b (ENSRNOG00000008187) #29	Crtam (ENSRNOG00000008153) #30	Jhy (ENSRNOG00000008138) #31	Bsx (ENSRNOG00000024438) #32	Hspa8 (ENSRNOG00000034066) ##33	Clmp (ENSRNOG00000053239) #34	Gramd1b (ENSRNOG00000053577) #36	Scn3b (ENSRNOG00000057221) #37	Zfp202 (ENSRNOG00000058932)	Or6x1 (ENSRNOG00000065544)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1889	Ccdc153 (ENSNGAG00000020146)	Cbl (ENSNGAG00000021221)	Mcam (ENSNGAG00000022720)	C1qtnf5 (ENSNGAG00000023822)	Mfrp (ENSNGAG00000024285)	ENSNGAG00000022179	Thy1 (ENSNGAG00000023265)	ENSNGAG00000023549	Nectin1 (ENSNGAG00000018208)	Trim29 (ENSNGAG00000020925)	Oaf (ENSNGAG00000011846)	Pou2f3 (ENSNGAG00000012581)	Tlcd5 (ENSNGAG00000016671)	Arhgef12 (ENSNGAG00000012115)	Grik4 (ENSNGAG00000023666) #21	Tbcel (ENSNGAG00000017476) #22	Tecta (ENSNGAG00000023948) #23	ENSNGAG00000022481 #24	Sorl1 (ENSNGAG00000017411) #25	Ubash3b (ENSNGAG00000014740) #29	Crtam (ENSNGAG00000022401) #30	Jhy (ENSNGAG00000001947) #31	Bsx (ENSNGAG00000024248) #32	Hspa8 (ENSNGAG00000011644) ##33	Clmp (ENSNGAG00000019063) #34	ENSNGAG00000023270	Gramd1b (ENSNGAG00000020444) #36	Scn3b (ENSNGAG00000020223) #37	ENSNGAG00000020546	Zfp202 (ENSNGAG00000022157)	ENSNGAG00000014331
Lesser Egyptian jerboa	MODERN SPECIES	142	Cbl (ENSJJAG00000015255)	Mcam (ENSJJAG00000014314)	C1qtnf5 (ENSJJAG00000014085)	Mfrp (ENSJJAG00000013394)	ENSJJAG00000012486	Thy1 (ENSJJAG00000012028)	ENSJJAG00000014022	ENSJJAG00000016113	Nectin1 (ENSJJAG00000015953)	Trim29 (ENSJJAG00000015693)	Oaf (ENSJJAG00000015119)	Pou2f3 (ENSJJAG00000014254)	Tlcd5 (ENSJJAG00000013409)	Arhgef12 (ENSJJAG00000008231)	Grik4 (ENSJJAG00000022344) #21	Tbcel (ENSJJAG00000020854) #22	Tecta (ENSJJAG00000018896) #23	Sc5d (ENSJJAG00000017694) #24	Sorl1 (ENSJJAG00000017298) #25	Ubash3b (ENSJJAG00000016033) #29	Crtam (ENSJJAG00000014838) #30	Jhy (ENSJJAG00000013871) #31	Bsx (ENSJJAG00000013198) #32	Hspa8 (ENSJJAG00000012917) ##33	Clmp (ENSJJAG00000012798) #34	Pcnt (ENSJJAG00000011857)	Dip2a (ENSJJAG00000009803)	S100b (ENSJJAG00000012400)	Prmt2 (ENSJJAG00000010743)	Ltbp1 (ENSJJAG00000023271)	Ttc27 (ENSJJAG00000016727)
Kangaroo rat	MODERN SPECIES	329	ENSDORG00000026565	Mcam (ENSDORG00000014625)	ENSDORG00000030084	C1qtnf5 (ENSDORG00000014627)	Mfrp (ENSDORG00000014629)	ENSDORG00000024719	Thy1 (ENSDORG00000028907)	ENSDORG00000023239	Nectin1 (ENSDORG00000000398)	Trim29 (ENSDORG00000007322)	ENSDORG00000028006	Pou2f3 (ENSDORG00000003563)	Tlcd5 (ENSDORG00000025068)	Arhgef12 (ENSDORG00000007308)	Grik4 (ENSDORG00000009556) #21	Tbcel (ENSDORG00000025652) #22	Tecta (ENSDORG00000008805) #23	Sc5d (ENSDORG00000011258) #24	Sorl1 (ENSDORG00000002124) #25	Ubash3b (ENSDORG00000011099) #29	Crtam (ENSDORG00000001816) #30	Jhy (ENSDORG00000014465) #31	Bsx (ENSDORG00000027972) #32	ENSDORG00000015467 #33	Clmp (ENSDORG00000026028) #34	Gramd1b (ENSDORG00000003924) #36	Scn3b (ENSDORG00000003926) #37	Zfp202 (ENSDORG00000004781)	ENSDORG00000004785	ENSDORG00000003347	ENSDORG00000012306
Lagomorpha	ANCESTRAL SPECIES	136									ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00940000161031 #34	ENSGT00950000183206.b.c.b #33	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000011564	ENSGT01040000240383.b.a.b	ENSGT00940000163057
Pika	MODERN SPECIES	3993											OAF (ENSOPRG00000005370)	POU2F3 (ENSOPRG00000005379)	TLCD5 (ENSOPRG00000005406)	ARHGEF12 (ENSOPRG00000005412)	GRIK4 (ENSOPRG00000005483) #21	TBCEL (ENSOPRG00000005511) #22	TECTA (ENSOPRG00000005527) #23
Rabbit	MODERN SPECIES		RNF214 (ENSOCUG00000011993)	BACE1 (ENSOCUG00000022776)	CEP164 (ENSOCUG00000010318)	DSCAML1 (ENSOCUG00000010335)	FXYD2 (ENSOCUG00000010359)	FXYD6 (ENSOCUG00000005593)	ENSOCUG00000030071	NECTIN1 (ENSOCUG00000010458)	ENSOCUG00000028128	TRIM29 (ENSOCUG00000021297)	OAF (ENSOCUG00000025219)	POU2F3 (ENSOCUG00000002831)	TLCD5 (ENSOCUG00000005192)	ARHGEF12 (ENSOCUG00000005196)	GRIK4 (ENSOCUG00000002692) #21	TBCEL (ENSOCUG00000002876) #22	TECTA (ENSOCUG00000001263) #23	ENSOCUG00000031744	SC5D (ENSOCUG00000011339) #24	SORL1 (ENSOCUG00000011346) #25	UBASH3B (ENSOCUG00000013072) #29	CRTAM (ENSOCUG00000013086) #30	JHY (ENSOCUG00000015523) #31	BSX (ENSOCUG00000002684) #32	ENSOCUG00000037082	ENSOCUG00000015533 #33	GRAMD1B (ENSOCUG00000010493) #36	SCN3B (ENSOCUG00000010502) #37	ENSOCUG00000010504	ZNF202 (ENSOCUG00000014264)	ENSOCUG00000002687
Tree shrew	MODERN SPECIES	2438															GRIK4 (ENSTBEG00000002425) #21	TBCEL (ENSTBEG00000003755) #22
Primates	ANCESTRAL SPECIES		ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Haplorrhini	ANCESTRAL SPECIES		ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Simiiformes	ANCESTRAL SPECIES		ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189
Catarrhini	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b
Hominoidea	ANCESTRAL SPECIES	1	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000153339.a.a.a.a.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b
Hominidae	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000153339.a.a.a.a.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.b.d #33	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	8	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000153339.a.a.a.a.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b	ENSGT00390000018560.b #37
Homo/Pan group	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000153339.a.a.a.a.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b	ENSGT00390000018560.b #37
Pan	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000153339.a.a.a.a.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b	ENSGT00390000018560.b #37	ENSGT00940000161189
Bonobo	MODERN SPECIES	2	CBL (ENSPPAG00000038518)	MCAM (ENSPPAG00000038390)	RNF26 (ENSPPAG00000017505)	MFRP (ENSPPAG00000041896)	C1QTNF5 (ENSPPAG00000011910)	USP2 (ENSPPAG00000027076)	THY1 (ENSPPAG00000030185)	ENSPPAG00000032373	NECTIN1 (ENSPPAG00000031563)	TRIM29 (ENSPPAG00000019409)	OAF (ENSPPAG00000034947)	POU2F3 (ENSPPAG00000036880)	TLCD5 (ENSPPAG00000023495)	ARHGEF12 (ENSPPAG00000034100)	GRIK4 (ENSPPAG00000029922) #21	TBCEL (ENSPPAG00000037457) #22	TECTA (ENSPPAG00000034978) #23	SC5D (ENSPPAG00000043959) #24	SORL1 (ENSPPAG00000027308) #25	UBASH3B (ENSPPAG00000031301) #29	CRTAM (ENSPPAG00000041032) #30	JHY (ENSPPAG00000029250) #31	BSX (ENSPPAG00000041447) #32	ENSPPAG00000032058	HSPA8 (ENSPPAG00000041004) ##33	CLMP (ENSPPAG00000029934) #34	ENSPPAG00000036661	GRAMD1B (ENSPPAG00000035403) #36	ENSPPAG00000039955	SCN3B (ENSPPAG00000031999) #37	ZNF202 (ENSPPAG00000040097)
Chimpanzee	MODERN SPECIES	2	CCDC153 (ENSPTRG00000028386)	CBL (ENSPTRG00000004378)	MCAM (ENSPTRG00000004379)	RNF26 (ENSPTRG00000004381)	MFRP (ENSPTRG00000024075)	USP2 (ENSPTRG00000004384)	THY1 (ENSPTRG00000004385)	ENSPTRG00000044210	NECTIN1 (ENSPTRG00000004387)	TRIM29 (ENSPTRG00000004388)	OAF (ENSPTRG00000004390)	POU2F3 (ENSPTRG00000004391)	TLCD5 (ENSPTRG00000004392)	ARHGEF12 (ENSPTRG00000004393)	GRIK4 (ENSPTRG00000004394) #21	TBCEL (ENSPTRG00000004395) #22	TECTA (ENSPTRG00000004396) #23	SC5D (ENSPTRG00000046128) #24	SORL1 (ENSPTRG00000004398) #25	UBASH3B (ENSPTRG00000004400) #29	CRTAM (ENSPTRG00000004401) #30	JHY (ENSPTRG00000004402) #31	BSX (ENSPTRG00000004403) #32	ENSPTRG00000049765	HSPA8 (ENSPTRG00000004404) ##33	CLMP (ENSPTRG00000004405) #34	ENSPTRG00000048153	GRAMD1B (ENSPTRG00000004406) #36	ENSPTRG00000046013	SCN3B (ENSPTRG00000004408) #37	ZNF202 (ENSPTRG00000004409)
Human	MODERN SPECIES	2	CCDC153 (ENSG00000248712)	CBL (ENSG00000110395)	MCAM (ENSG00000076706)	RNF26 (ENSG00000173456)	C1QTNF5 (ENSG00000223953)	MFRP (ENSG00000235718)	USP2 (ENSG00000036672)	THY1 (ENSG00000154096)	NECTIN1 (ENSG00000110400)	TRIM29 (ENSG00000137699)	OAF (ENSG00000184232)	POU2F3 (ENSG00000137709)	TLCD5 (ENSG00000181264)	ARHGEF12 (ENSG00000196914)	GRIK4 (ENSG00000149403) #21	TBCEL (ENSG00000154114) #22	TBCEL-TECTA (ENSG00000285509)	TECTA (ENSG00000109927) #23	SC5D (ENSG00000109929) #24	SORL1 (ENSG00000137642) #25	BLID (ENSG00000259571)	UBASH3B (ENSG00000154127) #29	CRTAM (ENSG00000109943) #30	JHY (ENSG00000109944) #31	BSX (ENSG00000188909) #32	HSPA8 (ENSG00000109971) ##33	CLMP (ENSG00000166250) #34	GRAMD1B (ENSG00000023171) #36	SCN3B (ENSG00000166257) #37	ZNF202 (ENSG00000166261)	OR6X1 (ENSG00000221931)
Gorilla	MODERN SPECIES	2	CCDC153 (ENSGGOG00000003235)	ENSGGOG00000036543	CBL (ENSGGOG00000003804)	MCAM (ENSGGOG00000003810)	RNF26 (ENSGGOG00000010369)	MFRP (ENSGGOG00000034888)	USP2 (ENSGGOG00000005083)	THY1 (ENSGGOG00000011554)	ENSGGOG00000036343	TRIM29 (ENSGGOG00000001938)	OAF (ENSGGOG00000008711)	POU2F3 (ENSGGOG00000008715)	TLCD5 (ENSGGOG00000036905)	ARHGEF12 (ENSGGOG00000008723)	GRIK4 (ENSGGOG00000000351) #21	TBCEL (ENSGGOG00000024606) #22	TECTA (ENSGGOG00000010060) #23	ENSGGOG00000004905 #24	ENSGGOG00000021948 #24	SORL1 (ENSGGOG00000002552) #25	BLID (ENSGGOG00000002119)	ENSGGOG00000023509	UBASH3B (ENSGGOG00000000599) #29	CRTAM (ENSGGOG00000009350) #30	JHY (ENSGGOG00000006104) #31	BSX (ENSGGOG00000006416) #32	ENSGGOG00000025359	ENSGGOG00000008381 #33	CLMP (ENSGGOG00000013181) #34	ENSGGOG00000041273	GRAMD1B (ENSGGOG00000007671) #36
Orangutan	MODERN SPECIES	2	CBL (ENSPPYG00000003962)	MCAM (ENSPPYG00000003963)	RNF26 (ENSPPYG00000003964)	C1QTNF5 (ENSPPYG00000040174)	MFRP (ENSPPYG00000003965)	USP2 (ENSPPYG00000003966)	THY1 (ENSPPYG00000031865)	NECTIN1 (ENSPPYG00000003969)	TRIM29 (ENSPPYG00000003970)	ENSPPYG00000038171	OAF (ENSPPYG00000003971)	POU2F3 (ENSPPYG00000003972)	TLCD5 (ENSPPYG00000030706)	ARHGEF12 (ENSPPYG00000003974)	GRIK4 (ENSPPYG00000003977) #21	TBCEL (ENSPPYG00000003978) #22	TECTA (ENSPPYG00000003979) #23	SC5D (ENSPPYG00000003980) #24	SORL1 (ENSPPYG00000003981) #25	UBASH3B (ENSPPYG00000003983) #29	CRTAM (ENSPPYG00000003984) #30	JHY (ENSPPYG00000003985) #31	BSX (ENSPPYG00000003986) #32	ENSPPYG00000032127	HSPA8 (ENSPPYG00000003987) #33	CLMP (ENSPPYG00000033296) #34	GRAMD1B (ENSPPYG00000004126) #36	SCN3B (ENSPPYG00000004127) #37	ZNF202 (ENSPPYG00000003989)	OR6X1 (ENSPPYG00000003990)	OR6M1 (ENSPPYG00000032767)
Gibbon	MODERN SPECIES	5	ENSNLEG00000035059	MCAM (ENSNLEG00000007393)	RNF26 (ENSNLEG00000019237)	ENSNLEG00000030771	MFRP (ENSNLEG00000007395)	USP2 (ENSNLEG00000007396)	ENSNLEG00000029508	ENSNLEG00000017058	NECTIN1 (ENSNLEG00000007399)	TRIM29 (ENSNLEG00000007400)	OAF (ENSNLEG00000007402)	POU2F3 (ENSNLEG00000007403)	TLCD5 (ENSNLEG00000007404)	ARHGEF12 (ENSNLEG00000007405)	GRIK4 (ENSNLEG00000007406) #21	TBCEL (ENSNLEG00000031977) #22	ENSNLEG00000007409	SC5D (ENSNLEG00000032644) #24	SORL1 (ENSNLEG00000007411) #25	ENSNLEG00000031133	UBASH3B (ENSNLEG00000007413) #29	CRTAM (ENSNLEG00000007415) #30	JHY (ENSNLEG00000007416) #31	BSX (ENSNLEG00000007417) #32	ENSNLEG00000029267	ENSNLEG00000007419 #33	ENSNLEG00000030788	CLMP (ENSNLEG00000007420) #34	GRAMD1B (ENSNLEG00000007422) #36	SCN3B (ENSNLEG00000035154) #37	ZNF202 (ENSNLEG00000007424)
Cercopithecidae	ANCESTRAL SPECIES		ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b	ENSGT01000000216167
Cercopithecinae	ANCESTRAL SPECIES	3	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b	ENSGT00390000018560.b #37
Cercopithecinae_a	ANCESTRAL SPECIES	2	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000010239.i.a	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000018696.m.b	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36
Macaca	ANCESTRAL SPECIES	2	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000010239.i.a	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000018696.m.b	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00390000018560.b #37
Macaca_a	ANCESTRAL SPECIES	3	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.b.b.b.a.b.a.a	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000018696.m.b	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Crab-eating macaque	MODERN SPECIES	5	CBL (ENSMFAG00000040139)	THY1 (ENSMFAG00000041030)	MCAM (ENSMFAG00000041611)	RNF26 (ENSMFAG00000030008)	C1QTNF5 (ENSMFAG00000048016)	MFRP (ENSMFAG00000011642)	ENSMFAG00000052476	USP2 (ENSMFAG00000038340)	NECTIN1 (ENSMFAG00000045996)	TRIM29 (ENSMFAG00000032457)	OAF (ENSMFAG00000032739)	POU2F3 (ENSMFAG00000041578)	TLCD5 (ENSMFAG00000062098)	ARHGEF12 (ENSMFAG00000001538)	GRIK4 (ENSMFAG00000036614) #21	TBCEL (ENSMFAG00000032553) #22	TECTA (ENSMFAG00000035833) #23	SC5D (ENSMFAG00000001405) #24	SORL1 (ENSMFAG00000031352) #25	ENSMFAG00000012859	UBASH3B (ENSMFAG00000032807) #29	CRTAM (ENSMFAG00000039012) #30	JHY (ENSMFAG00000036541) #31	BSX (ENSMFAG00000049055) #32	ENSMFAG00000038633 ##33	CLMP (ENSMFAG00000042143) #34	GRAMD1B (ENSMFAG00000023822) #36	SCN3B (ENSMFAG00000001774) #37	ZNF202 (ENSMFAG00000002603)	OR6X1 (ENSMFAG00000065461)	OR6M1 (ENSMFAG00000052226)
Pig-tailed macaque	MODERN SPECIES	537	CBL (ENSMNEG00000031739)	MCAM (ENSMNEG00000043082)	ENSMNEG00000041171	RNF26 (ENSMNEG00000016950)	C1QTNF5 (ENSMNEG00000027309)	MFRP (ENSMNEG00000040703)	USP2 (ENSMNEG00000036119)	THY1 (ENSMNEG00000024435)	NECTIN1 (ENSMNEG00000040408)	TRIM29 (ENSMNEG00000041337)	OAF (ENSMNEG00000036407)	POU2F3 (ENSMNEG00000028559)	TLCD5 (ENSMNEG00000039176)	ARHGEF12 (ENSMNEG00000033616)	GRIK4 (ENSMNEG00000032182) #21	TBCEL (ENSMNEG00000035148) #22	TECTA (ENSMNEG00000040467) #23	SC5D (ENSMNEG00000028441) #24	SORL1 (ENSMNEG00000044804) #25	UBASH3B (ENSMNEG00000028610) #29	CRTAM (ENSMNEG00000024995) #30	JHY (ENSMNEG00000042234) #31	BSX (ENSMNEG00000040892) #32	ENSMNEG00000043029	HSPA8 (ENSMNEG00000039117) ##33	ENSMNEG00000044310	CLMP (ENSMNEG00000036899) #34	GRAMD1B (ENSMNEG00000036267) #36	SCN3B (ENSMNEG00000032570) #37	ZNF202 (ENSMNEG00000043058)	TMEM225 (ENSMNEG00000037095)
Cercopithecinae_b	ANCESTRAL SPECIES	21	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000010239.i.a	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000018696.m.b	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36
Olive baboon	MODERN SPECIES	3	CBL (ENSPANG00000018962)	MCAM (ENSPANG00000011051)	RNF26 (ENSPANG00000021114)	C1QTNF5 (ENSPANG00000003692)	MFRP (ENSPANG00000022408)	USP2 (ENSPANG00000014344)	THY1 (ENSPANG00000014882)	ENSPANG00000049873	NECTIN1 (ENSPANG00000003691)	TRIM29 (ENSPANG00000007948)	OAF (ENSPANG00000050743)	POU2F3 (ENSPANG00000005039)	TLCD5 (ENSPANG00000019802)	ARHGEF12 (ENSPANG00000014881)	GRIK4 (ENSPANG00000003099) #21	TBCEL (ENSPANG00000032315) #22	TECTA (ENSPANG00000000279) #23	SC5D (ENSPANG00000019258) #24	SORL1 (ENSPANG00000002674) #25	ENSPANG00000014769	UBASH3B (ENSPANG00000023957) #29	CRTAM (ENSPANG00000043725) #30	JHY (ENSPANG00000015650) #31	BSX (ENSPANG00000019257) #32	ENSPANG00000039836	ENSPANG00000042004	ENSPANG00000011889 #33	CLMP (ENSPANG00000019256) #34	SCN3B (ENSPANG00000019800) #37	GRAMD1B (ENSPANG00000018864) #36	ZNF202 (ENSPANG00000004921)
Cercopithecinae_d	ANCESTRAL SPECIES	30	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000010239.i.a	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000018696.m.b	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00530000063402.a.h.b
Sooty mangabey	MODERN SPECIES	603	CBL (ENSCATG00000000048)	MCAM (ENSCATG00000044460)	ENSCATG00000043592	RNF26 (ENSCATG00000020989)	C1QTNF5 (ENSCATG00000013079)	MFRP (ENSCATG00000030833)	USP2 (ENSCATG00000007781)	THY1 (ENSCATG00000031742)	NECTIN1 (ENSCATG00000038354)	TRIM29 (ENSCATG00000016981)	OAF (ENSCATG00000039933)	POU2F3 (ENSCATG00000029215)	TLCD5 (ENSCATG00000036291)	ARHGEF12 (ENSCATG00000035895)	GRIK4 (ENSCATG00000035157) #21	TBCEL (ENSCATG00000045254) #22	ENSCATG00000038315	SC5D (ENSCATG00000042147) #24	SORL1 (ENSCATG00000040217) #25	ENSCATG00000020049	BLID (ENSCATG00000037327)	UBASH3B (ENSCATG00000023456) #29	CRTAM (ENSCATG00000035951) #30	JHY (ENSCATG00000038792) #31	BSX (ENSCATG00000041522) #32	ENSCATG00000039485	ENSCATG00000036017	CLMP (ENSCATG00000032254) #34	ENSCATG00000038638	GRAMD1B (ENSCATG00000034288) #36	ENSCATG00000038417
Drill	MODERN SPECIES	1442	CCDC153 (ENSMLEG00000039420)	CBL (ENSMLEG00000036210)	MCAM (ENSMLEG00000026928)	ENSMLEG00000032552	RNF26 (ENSMLEG00000007321)	MFRP (ENSMLEG00000038923)	USP2 (ENSMLEG00000038440)	THY1 (ENSMLEG00000040451)	NECTIN1 (ENSMLEG00000044133)	TRIM29 (ENSMLEG00000036027)	OAF (ENSMLEG00000036891)	POU2F3 (ENSMLEG00000028245)	TLCD5 (ENSMLEG00000029963)	ARHGEF12 (ENSMLEG00000026495)	GRIK4 (ENSMLEG00000025698) #21	TBCEL (ENSMLEG00000025791) #22	TECTA (ENSMLEG00000028945) #23	SC5D (ENSMLEG00000036490) #24	SORL1 (ENSMLEG00000039313) #25	ENSMLEG00000022433	UBASH3B (ENSMLEG00000041837) #29	CRTAM (ENSMLEG00000028583) #30	JHY (ENSMLEG00000032823) #31	BSX (ENSMLEG00000036709) #32	ENSMLEG00000039190	ENSMLEG00000031834 ##33	CLMP (ENSMLEG00000022965) #34	ENSMLEG00000029252	ENSMLEG00000043025 #36
Vervet Monkey	MODERN SPECIES		MCAM (ENSCSAG00000002503)	RNF26 (ENSCSAG00000000594)	C1QTNF5 (ENSCSAG00000002500)	MFRP (ENSCSAG00000002497)	USP2 (ENSCSAG00000002490)	THY1 (ENSCSAG00000002488)	NECTIN1 (ENSCSAG00000002486)	TRIM29 (ENSCSAG00000002483)	OAF (ENSCSAG00000002480)	POU2F3 (ENSCSAG00000002476)	TLCD5 (ENSCSAG00000002472)	ARHGEF12 (ENSCSAG00000002470)	ENSCSAG00000000593	ENSCSAG00000002464	GRIK4 (ENSCSAG00000002460) #21	TBCEL (ENSCSAG00000002453) #22	TECTA (ENSCSAG00000002447) #23	SC5D (ENSCSAG00000002441) #24	SORL1 (ENSCSAG00000002437) #25	ENSCSAG00000000592	BLID (ENSCSAG00000002430)	UBASH3B (ENSCSAG00000002428) #29	CRTAM (ENSCSAG00000002423) #30	JHY (ENSCSAG00000002416) #31	BSX (ENSCSAG00000002413) #32	ENSCSAG00000002411 #33	CLMP (ENSCSAG00000002410) #34	GRAMD1B (ENSCSAG00000002406) #36	SCN3B (ENSCSAG00000002404) #37	ZNF202 (ENSCSAG00000002403)	OR6X1 (ENSCSAG00000000591)
Rhinopithecus	ANCESTRAL SPECIES	77	ENSGT00940000155772.b	ENSGT00910000148666	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00390000014520.j	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00550000075007.i.a	ENSGT00950000183206.b.c.b.d #33	ENSGT00950000183206.b.c.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT00390000011943.a.b.i.b
Golden snub-nosed monkey	MODERN SPECIES	3143	MCAM (ENSRROG00000039494)	RNF26 (ENSRROG00000001057)	C1QTNF5 (ENSRROG00000018790)	MFRP (ENSRROG00000040629)	USP2 (ENSRROG00000041516)	THY1 (ENSRROG00000034588)	NECTIN1 (ENSRROG00000045145)	TRIM29 (ENSRROG00000030222)	OAF (ENSRROG00000035538)	POU2F3 (ENSRROG00000045297)	TLCD5 (ENSRROG00000008707)	ARHGEF12 (ENSRROG00000019620)	ENSRROG00000043020	ENSRROG00000003857	GRIK4 (ENSRROG00000036204) #21	TBCEL (ENSRROG00000040596) #22	TECTA (ENSRROG00000014275) #23	SC5D (ENSRROG00000036199) #24
Black snub-nosed monkey	MODERN SPECIES	2695															GRIK4 (ENSRBIG00000028153) #21	TBCEL (ENSRBIG00000027727) #22	TECTA (ENSRBIG00000037995) #23
Platyrrhini	ANCESTRAL SPECIES	3	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000154517.e.a	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189
Cebidae	ANCESTRAL SPECIES		ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Cebidae_a	ANCESTRAL SPECIES	22	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.d #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000011564
Capuchin	MODERN SPECIES	28	ENSCCAG00000034893	MCAM (ENSCCAG00000032195)	ENSCCAG00000021048	RNF26 (ENSCCAG00000019825)	ENSCCAG00000021418	MFRP (ENSCCAG00000037590)	USP2 (ENSCCAG00000033760)	THY1 (ENSCCAG00000030161)	NECTIN1 (ENSCCAG00000022347)	TRIM29 (ENSCCAG00000021431)	OAF (ENSCCAG00000020197)	POU2F3 (ENSCCAG00000037738)	TLCD5 (ENSCCAG00000029279)	ARHGEF12 (ENSCCAG00000027602)	GRIK4 (ENSCCAG00000009167) #21	TBCEL (ENSCCAG00000019888) #22	TECTA (ENSCCAG00000020047) #23	SC5D (ENSCCAG00000014865) #24	ENSCCAG00000028386	SORL1 (ENSCCAG00000027625) #25	ENSCCAG00000035645	BLID (ENSCCAG00000037791)	UBASH3B (ENSCCAG00000022485) #29	CRTAM (ENSCCAG00000036495) #30	JHY (ENSCCAG00000027110) #31	BSX (ENSCCAG00000028134) #32	ENSCCAG00000033437 #33	CLMP (ENSCCAG00000030124) #34	ENSCCAG00000034426	ENSCCAG00000015827	GRAMD1B (ENSCCAG00000036156) #36
Bolivian squirrel monkey	MODERN SPECIES	50	CBL (ENSSBOG00000021821)	MCAM (ENSSBOG00000014956)	ENSSBOG00000021803	RNF26 (ENSSBOG00000018484)	C1QTNF5 (ENSSBOG00000028009)	MFRP (ENSSBOG00000021656)	USP2 (ENSSBOG00000034295)	THY1 (ENSSBOG00000021168)	NECTIN1 (ENSSBOG00000027245)	TRIM29 (ENSSBOG00000021760)	OAF (ENSSBOG00000020591)	POU2F3 (ENSSBOG00000033756)	TLCD5 (ENSSBOG00000025172)	ARHGEF12 (ENSSBOG00000020565)	GRIK4 (ENSSBOG00000030277) #21	TBCEL (ENSSBOG00000028041) #22	TECTA (ENSSBOG00000019507) #23	SC5D (ENSSBOG00000020424) #24	ENSSBOG00000015796	SORL1 (ENSSBOG00000027914) #25	BLID (ENSSBOG00000028902)	ENSSBOG00000032996	UBASH3B (ENSSBOG00000026096) #29	CRTAM (ENSSBOG00000020006) #30	ENSSBOG00000019647	JHY (ENSSBOG00000020543) #31	BSX (ENSSBOG00000035292) #32	ENSSBOG00000033034	ENSSBOG00000032961 #33	ENSSBOG00000029761	ENSSBOG00000035266
Marmoset	MODERN SPECIES	2	CBL (ENSCJAG00000014015)	MCAM (ENSCJAG00000014034)	RNF26 (ENSCJAG00000014065)	C1QTNF5 (ENSCJAG00000057413)	MFRP (ENSCJAG00000014068)	USP2 (ENSCJAG00000014080)	THY1 (ENSCJAG00000068403)	NECTIN1 (ENSCJAG00000014126)	ENSCJAG00000076872	TRIM29 (ENSCJAG00000014137)	OAF (ENSCJAG00000067985)	POU2F3 (ENSCJAG00000014166)	TLCD5 (ENSCJAG00000014193)	ARHGEF12 (ENSCJAG00000014200)	GRIK4 (ENSCJAG00000007360) #21	TBCEL (ENSCJAG00000007368) #22	ENSCJAG00000078066	TECTA (ENSCJAG00000007401) #23	ENSCJAG00000007436 #24	SORL1 (ENSCJAG00000007446) #25	UBASH3B (ENSCJAG00000043067) #29	CRTAM (ENSCJAG00000007623) #30	JHY (ENSCJAG00000007637) #31	BSX (ENSCJAG00000076416) #32	ENSCJAG00000007648 #33	ENSCJAG00000073028	GRAMD1B (ENSCJAG00000007699) #36	SCN3B (ENSCJAG00000007754) #37	ZNF202 (ENSCJAG00000007782)	OR6X1 (ENSCJAG00000023448)	TMEM225 (ENSCJAG00000080615)
Mas night monkey	MODERN SPECIES	527	CCDC153 (ENSANAG00000024060)	CBL (ENSANAG00000029664)	MCAM (ENSANAG00000036872)	RNF26 (ENSANAG00000009708)	C1QTNF5 (ENSANAG00000022833)	MFRP (ENSANAG00000021927)	USP2 (ENSANAG00000038057)	THY1 (ENSANAG00000034071)	NECTIN1 (ENSANAG00000037728)	TRIM29 (ENSANAG00000035721)	OAF (ENSANAG00000028659)	POU2F3 (ENSANAG00000037801)	TLCD5 (ENSANAG00000028920)	ARHGEF12 (ENSANAG00000035929)	GRIK4 (ENSANAG00000029340) #21	TBCEL (ENSANAG00000037781) #22	TECTA (ENSANAG00000021954) #23	SC5D (ENSANAG00000031781) #24	SORL1 (ENSANAG00000031276) #25	BLID (ENSANAG00000028884)	ENSANAG00000035361	UBASH3B (ENSANAG00000020625) #29	CRTAM (ENSANAG00000035170) #30	JHY (ENSANAG00000032921) #31	BSX (ENSANAG00000027600) #32	ENSANAG00000034435 #33	CLMP (ENSANAG00000036244) #34	ENSANAG00000028995	GRAMD1B (ENSANAG00000019027) #36	ENSANAG00000032228	SCN3B (ENSANAG00000037873) #37
Tarsier	MODERN SPECIES	3531																TBCEL (ENSTSYG00000031311) #22	TECTA (ENSTSYG00000005888) #23
Strepsirrhini	ANCESTRAL SPECIES	6	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.l #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Lemuriformes	ANCESTRAL SPECIES	13	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.l #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Lemuriformes_a	ANCESTRAL SPECIES	22	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.l #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Coquerels sifaka	MODERN SPECIES	322									NECTIN1 (ENSPCOG00000021908)	TRIM29 (ENSPCOG00000015865)	OAF (ENSPCOG00000020839)	POU2F3 (ENSPCOG00000009066)	TLCD5 (ENSPCOG00000027456)	ARHGEF12 (ENSPCOG00000001476)	GRIK4 (ENSPCOG00000027128) #21	TBCEL (ENSPCOG00000027242) #22	TECTA (ENSPCOG00000015732) #23	SC5D (ENSPCOG00000022863) #24	SORL1 (ENSPCOG00000007331) #25	UBASH3B (ENSPCOG00000018026) #29	CRTAM (ENSPCOG00000026180) #30	JHY (ENSPCOG00000022404) #31	BSX (ENSPCOG00000018472) #32	ENSPCOG00000015088 ##33	CLMP (ENSPCOG00000024309) #34	ENSPCOG00000009328	GRAMD1B (ENSPCOG00000017678) #36	SCN3B (ENSPCOG00000021142) #37	ENSPCOG00000003859	ENSPCOG00000005658	ZNF202 (ENSPCOG00000021665)
Greater bamboo lemur	MODERN SPECIES	351	CCDC153 (ENSPSMG00000004433)	CBL (ENSPSMG00000004511)	MCAM (ENSPSMG00000004606)	RNF26 (ENSPSMG00000004641)	C1QTNF5 (ENSPSMG00000004643)	MFRP (ENSPSMG00000004654)	USP2 (ENSPSMG00000004757)	THY1 (ENSPSMG00000004899)	NECTIN1 (ENSPSMG00000004922)	TRIM29 (ENSPSMG00000004954)	OAF (ENSPSMG00000004988)	POU2F3 (ENSPSMG00000004997)	TLCD5 (ENSPSMG00000005005)	ARHGEF12 (ENSPSMG00000005221)	GRIK4 (ENSPSMG00000005336) #21	TBCEL (ENSPSMG00000005346) #22	TECTA (ENSPSMG00000005371) #23	SC5D (ENSPSMG00000005391) #24	SORL1 (ENSPSMG00000005513) #25	UBASH3B (ENSPSMG00000005673) #29	CRTAM (ENSPSMG00000005688) #30	ENSPSMG00000005695 #31	ENSPSMG00000005705	BSX (ENSPSMG00000005715) #32	HSPA8 (ENSPSMG00000005856) ##33	CLMP (ENSPSMG00000006159) #34	GRAMD1B (ENSPSMG00000006531) #36	SCN3B (ENSPSMG00000007278) #37	ZNF202 (ENSPSMG00000007304)	OR6X1 (ENSPSMG00000007311)	OR6M1 (ENSPSMG00000007312)
Mouse lemur	MODERN SPECIES	27	CBL (ENSMICG00000004567)	ENSMICG00000028997	ENSMICG00000045265	MCAM (ENSMICG00000045946)	C1QTNF5 (ENSMICG00000046225)	MFRP (ENSMICG00000006043)	USP2 (ENSMICG00000006049)	THY1 (ENSMICG00000045672)	NECTIN1 (ENSMICG00000014993)	TRIM29 (ENSMICG00000011088)	OAF (ENSMICG00000011133)	POU2F3 (ENSMICG00000011142)	TLCD5 (ENSMICG00000011149)	ARHGEF12 (ENSMICG00000011152)	GRIK4 (ENSMICG00000011188) #21	TBCEL (ENSMICG00000011213) #22	SC5D (ENSMICG00000011243) #24	SORL1 (ENSMICG00000011249) #25	ENSMICG00000038669	ENSMICG00000046767	UBASH3B (ENSMICG00000004676) #29	CRTAM (ENSMICG00000004685) #30	ENSMICG00000033241	JHY (ENSMICG00000004695) #31	BSX (ENSMICG00000004697) #32	ENSMICG00000004702 ##33	CLMP (ENSMICG00000046908) #34	ENSMICG00000029826	GRAMD1B (ENSMICG00000007638) #36	SCN3B (ENSMICG00000032256) #37	ZNF202 (ENSMICG00000007659)
Bushbaby	MODERN SPECIES	223	RNF26 (ENSOGAG00000007332)	C1QTNF5 (ENSOGAG00000033564)	MFRP (ENSOGAG00000007334)	USP2 (ENSOGAG00000007337)	ENSOGAG00000024281	THY1 (ENSOGAG00000007340)	ENSOGAG00000032505	NECTIN1 (ENSOGAG00000007344)	TRIM29 (ENSOGAG00000030610)	OAF (ENSOGAG00000013849)	POU2F3 (ENSOGAG00000010523)	TLCD5 (ENSOGAG00000025616)	ENSOGAG00000033051	ARHGEF12 (ENSOGAG00000010533)	GRIK4 (ENSOGAG00000001541) #21	TBCEL (ENSOGAG00000001545) #22	TECTA (ENSOGAG00000001548) #23	SC5D (ENSOGAG00000001274) #24	SORL1 (ENSOGAG00000009277) #25	UBASH3B (ENSOGAG00000005102) #29	CRTAM (ENSOGAG00000005105) #30	ENSOGAG00000032137	JHY (ENSOGAG00000011458) #31	BSX (ENSOGAG00000014479) #32	ENSOGAG00000031566 ##33	CLMP (ENSOGAG00000007360) #34	ENSOGAG00000025441 #36	ENSOGAG00000014595 #36	SCN3B (ENSOGAG00000014602) #37	ZNF202 (ENSOGAG00000026373)	ENSOGAG00000014613
Laurasiatheria	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Laurasiatheria_a	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Artiodactyla	ANCESTRAL SPECIES	1	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Suina	ANCESTRAL SPECIES	5	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Pig	MODERN SPECIES	17	NHERF4 (ENSSSCG00000027710)	CBL (ENSSSCG00000015115)	MCAM (ENSSSCG00000015116)	RNF26 (ENSSSCG00000015117)	C1QTNF5 (ENSSSCG00000054880)	MFRP (ENSSSCG00000015119)	USP2 (ENSSSCG00000015120)	ENSSSCG00000032330	NECTIN1 (ENSSSCG00000015125)	TRIM29 (ENSSSCG00000015126)	OAF (ENSSSCG00000036307)	POU2F3 (ENSSSCG00000028237)	TLCD5 (ENSSSCG00000037406)	ARHGEF12 (ENSSSCG00000015129)	GRIK4 (ENSSSCG00000015131) #21	TBCEL (ENSSSCG00000055670) #22	TECTA (ENSSSCG00000023728) #23	ENSSSCG00000042642	ENSSSCG00000051213	SC5D (ENSSSCG00000028517) #24	ENSSSCG00000063177	SORL1 (ENSSSCG00000015135) #25	UBASH3B (ENSSSCG00000015136) #29	CRTAM (ENSSSCG00000015137) #30	JHY (ENSSSCG00000015138) #31	BSX (ENSSSCG00000015139) #32	HSPA8 (ENSSSCG00000015140) ##33	CLMP (ENSSSCG00000022961) #34	GRAMD1B (ENSSSCG00000015144) #36	SCN3B (ENSSSCG00000053283) #37	ZNF202 (ENSSSCG00000015145)
Chacoan peccary	MODERN SPECIES	905	CCDC153 (ENSCWAG00000015770)	CBL (ENSCWAG00000015827)	MCAM (ENSCWAG00000015886)	RNF26 (ENSCWAG00000015911)	C1QTNF5 (ENSCWAG00000015923)	MFRP (ENSCWAG00000015963)	USP2 (ENSCWAG00000016181)	THY1 (ENSCWAG00000016514)	NECTIN1 (ENSCWAG00000016567)	TRIM29 (ENSCWAG00000016598)	OAF (ENSCWAG00000016675)	POU2F3 (ENSCWAG00000016702)	TLCD5 (ENSCWAG00000016801)	ARHGEF12 (ENSCWAG00000016974)	GRIK4 (ENSCWAG00000017324) #21	TBCEL (ENSCWAG00000017466) #22	TECTA (ENSCWAG00000017507) #23	SC5D (ENSCWAG00000017753) #24	ENSCWAG00000017782	SORL1 (ENSCWAG00000017846) #25	ENSCWAG00000018478	UBASH3B (ENSCWAG00000018507) #29	CRTAM (ENSCWAG00000018535) #30	JHY (ENSCWAG00000018621) #31	BSX (ENSCWAG00000018663) #32
Artiodactyla_a	ANCESTRAL SPECIES	1	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Camelidae	ANCESTRAL SPECIES	31	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Alpaca	MODERN SPECIES	1217																TBCEL (ENSVPAG00000006085) #22	ENSVPAG00000006086	SC5D (ENSVPAG00000006095) #24	ENSVPAG00000006098 #25
Arabian camel	MODERN SPECIES	26	CBL (ENSCDRG00005020858)	MCAM (ENSCDRG00005020930)	RNF26 (ENSCDRG00005021244)	C1QTNF5 (ENSCDRG00005021245)	MFRP (ENSCDRG00005021248)	USP2 (ENSCDRG00005021255)	THY1 (ENSCDRG00005021265)	ENSCDRG00005021269	NECTIN1 (ENSCDRG00005021272)	TRIM29 (ENSCDRG00005021275)	OAF (ENSCDRG00005021284)	POU2F3 (ENSCDRG00005021288)	TLCD5 (ENSCDRG00005009027)	ARHGEF12 (ENSCDRG00005009305)	GRIK4 (ENSCDRG00005011077) #21	TBCEL (ENSCDRG00005011265) #22	TECTA (ENSCDRG00005011328) #23	SC5D (ENSCDRG00005011663) #24	SORL1 (ENSCDRG00005011791) #25	UBASH3B (ENSCDRG00005013145) #29	CRTAM (ENSCDRG00005013215) #30	JHY (ENSCDRG00005013357) #31	BSX (ENSCDRG00005013454) #32	ENSCDRG00005013527 #33	CLMP (ENSCDRG00005013808) #34	GRAMD1B (ENSCDRG00005013912) #36	SCN3B (ENSCDRG00005014371) #37	ZNF202 (ENSCDRG00005014421)	OR6X1 (ENSCDRG00005014482)	OR6M1 (ENSCDRG00005014513)	ENSCDRG00005014538
Artiodactyla_b	ANCESTRAL SPECIES	1	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Cetacea	ANCESTRAL SPECIES	4	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT00390000016760.c.a.b	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00390000011564
Odontoceti	ANCESTRAL SPECIES	4	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.b	ENSGT01050000244869.a.a.a.b.a.b.a.a
Odontoceti_a	ANCESTRAL SPECIES	4	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.b	ENSGT01010000222320.a.a.a.a.a
Odontoceti_b	ANCESTRAL SPECIES	4	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00390000014165.c.a.b.b.b.e.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.b	ENSGT01010000222320.a.a.a.a.a
Monodontidae	ANCESTRAL SPECIES	2	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00390000014165.c.a.b.b.b.e.a	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01090000260806	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.b
Narwhal	MODERN SPECIES	314	CBL (ENSMMNG00015020887)	MCAM (ENSMMNG00015020852)	RNF26 (ENSMMNG00015020835)	C1QTNF5 (ENSMMNG00015020819)	MFRP (ENSMMNG00015020764)	USP2 (ENSMMNG00015020681)	THY1 (ENSMMNG00015020644)	ENSMMNG00015020637	NECTIN1 (ENSMMNG00015020601)	TRIM29 (ENSMMNG00015020567)	OAF (ENSMMNG00015020541)	POU2F3 (ENSMMNG00015020524)	TLCD5 (ENSMMNG00015020500)	ARHGEF12 (ENSMMNG00015020154)	GRIK4 (ENSMMNG00015020019) #21	TBCEL (ENSMMNG00015019986) #22	TECTA (ENSMMNG00015019882) #23	SC5D (ENSMMNG00015019847) #24	ENSMMNG00015019829	SORL1 (ENSMMNG00015019380) #25	UBASH3B (ENSMMNG00015019212) #29	CRTAM (ENSMMNG00015019162) #30	JHY (ENSMMNG00015019118) #31	BSX (ENSMMNG00015019090) #32	ENSMMNG00015019028 #33	CLMP (ENSMMNG00015018982) #34	ENSMMNG00015018945	GRAMD1B (ENSMMNG00015018401) #36	SCN3B (ENSMMNG00015018278) #37	ZNF202 (ENSMMNG00015018240)	OR6M1 (ENSMMNG00015018024)
Beluga whale	MODERN SPECIES	63	CBL (ENSDLEG00000019509)	MCAM (ENSDLEG00000019502)	RNF26 (ENSDLEG00000019499)	C1QTNF5 (ENSDLEG00000019497)	ENSDLEG00000019484	USP2 (ENSDLEG00000019480)	THY1 (ENSDLEG00000019477)	ENSDLEG00000019474	NECTIN1 (ENSDLEG00000019467)	TRIM29 (ENSDLEG00000019458)	OAF (ENSDLEG00000019455)	POU2F3 (ENSDLEG00000019435)	TMEM136 (ENSDLEG00000019428)	ARHGEF12 (ENSDLEG00000019417)	GRIK4 (ENSDLEG00000018780) #21	TBCEL (ENSDLEG00000018724) #22	TECTA (ENSDLEG00000018672) #23	SC5D (ENSDLEG00000018663) #24	ENSDLEG00000018656	SORL1 (ENSDLEG00000018131) #25	ENSDLEG00000018057	UBASH3B (ENSDLEG00000018037) #29	CRTAM (ENSDLEG00000018008) #30	CUNH11orf63 (ENSDLEG00000017984) #31	BSX (ENSDLEG00000017973) #32	HSPA8 (ENSDLEG00000017946) ##33	CLMP (ENSDLEG00000017919) #34	ENSDLEG00000017895	ENSDLEG00000017884 #36	GRAMD1B (ENSDLEG00000016933) #36	SCN3B (ENSDLEG00000016865) #37
Vaquita	MODERN SPECIES	19	CBL (ENSPSNG00000021110)	MCAM (ENSPSNG00000020982)	RNF26 (ENSPSNG00000020952)	C1QTNF5 (ENSPSNG00000020933)	MFRP (ENSPSNG00000020811)	USP2 (ENSPSNG00000020722)	THY1 (ENSPSNG00000020675)	ENSPSNG00000020660	NECTIN1 (ENSPSNG00000020613)	TRIM29 (ENSPSNG00000020568)	OAF (ENSPSNG00000020531)	POU2F3 (ENSPSNG00000020450)	TLCD5 (ENSPSNG00000020407)	ARHGEF12 (ENSPSNG00000020278)	GRIK4 (ENSPSNG00000020143) #21	TBCEL (ENSPSNG00000020096) #22	TECTA (ENSPSNG00000019839) #23	SC5D (ENSPSNG00000019783) #24	ENSPSNG00000019739	SORL1 (ENSPSNG00000018829) #25	UBASH3B (ENSPSNG00000018698) #29	CRTAM (ENSPSNG00000018597) #30	JHY (ENSPSNG00000018565) #31	BSX (ENSPSNG00000018510) #32	ENSPSNG00000018377 #33	CLMP (ENSPSNG00000018310) #34	ENSPSNG00000018248	GRAMD1B (ENSPSNG00000017137) #36	SCN3B (ENSPSNG00000016990) #37	ZNF202 (ENSPSNG00000016950)	OR6M1 (ENSPSNG00000016548)
Dolphin	MODERN SPECIES	1005															GRIK4 (ENSTTRG00000012094) #21	TBCEL (ENSTTRG00000012104) #22	TECTA (ENSTTRG00000012107) #23
Sperm whale	MODERN SPECIES	7	NHERF4 (ENSPCTG00005009083)	CBL (ENSPCTG00005008867)	MCAM (ENSPCTG00005008833)	RNF26 (ENSPCTG00005008815)	C1QTNF5 (ENSPCTG00005008788)	MFRP (ENSPCTG00005008560)	USP2 (ENSPCTG00005021496)	THY1 (ENSPCTG00005021447)	NECTIN1 (ENSPCTG00005021410)	TRIM29 (ENSPCTG00005021371)	OAF (ENSPCTG00005021343)	POU2F3 (ENSPCTG00005021300)	ENSPCTG00005021262	ARHGEF12 (ENSPCTG00005021172)	GRIK4 (ENSPCTG00005021076) #21	TBCEL (ENSPCTG00005021053) #22	TECTA (ENSPCTG00005020859) #23	SC5D (ENSPCTG00005020828) #24	SORL1 (ENSPCTG00005019970) #25	UBASH3B (ENSPCTG00005019859) #29	CRTAM (ENSPCTG00005019739) #30	JHY (ENSPCTG00005019709) #31	BSX (ENSPCTG00005019664) #32	ENSPCTG00005019643	ENSPCTG00005019601 ##33	CLMP (ENSPCTG00005019556) #34	ENSPCTG00005019502	GRAMD1B (ENSPCTG00005018359) #36	SCN3B (ENSPCTG00005018207) #37	OR6X1 (ENSPCTG00005017783)	ZNF202 (ENSPCTG00005017733)
Blue whale	MODERN SPECIES	19	NHERF4 (ENSBMSG00010011736)	ENSBMSG00010011711	CBL (ENSBMSG00010011688)	MCAM (ENSBMSG00010011650)	RNF26 (ENSBMSG00010011642)	C1QTNF5 (ENSBMSG00010011630)	MFRP (ENSBMSG00010011603)	USP2 (ENSBMSG00010011532)	THY1 (ENSBMSG00010011499)	NECTIN1 (ENSBMSG00010011473)	TRIM29 (ENSBMSG00010011423)	POU2F3 (ENSBMSG00010011341)	TLCD5 (ENSBMSG00010011237)	ARHGEF12 (ENSBMSG00010010986)	GRIK4 (ENSBMSG00010010793) #21	TBCEL (ENSBMSG00010010766) #22	TECTA (ENSBMSG00010010715) #23	SC5D (ENSBMSG00010010680) #24	ENSBMSG00010010666	SORL1 (ENSBMSG00010010445) #25	UBASH3B (ENSBMSG00010010294) #29	CRTAM (ENSBMSG00010010270) #30	JHY (ENSBMSG00010010245) #31	BSX (ENSBMSG00010010230) #32	HSPA8 (ENSBMSG00010010196) ##33	CLMP (ENSBMSG00010010161) #34	ENSBMSG00010010131	GRAMD1B (ENSBMSG00010010049) #36	SCN3B (ENSBMSG00010010008) #37	ZNF202 (ENSBMSG00010009992)	TMEM225 (ENSBMSG00010009917)
Pecora	ANCESTRAL SPECIES	7	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Percora_a	ANCESTRAL SPECIES	6	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Bovidae	ANCESTRAL SPECIES	6	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Caprinae	ANCESTRAL SPECIES	6	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a	ENSGT00940000160684
Goat	MODERN SPECIES	6	CCDC153 (ENSCHIG00000013639)	CBL (ENSCHIG00000008131)	MCAM (ENSCHIG00000013559)	C1QTNF5 (ENSCHIG00000014716)	MFRP (ENSCHIG00000019590)	USP2 (ENSCHIG00000002460)	THY1 (ENSCHIG00000024336)	NECTIN1 (ENSCHIG00000026297)	TRIM29 (ENSCHIG00000025539)	OAF (ENSCHIG00000009782)	POU2F3 (ENSCHIG00000017342)	TLCD5 (ENSCHIG00000020483)	ARHGEF12 (ENSCHIG00000026831)	GRIK4 (ENSCHIG00000008888) #21	ENSCHIG00000026160	TBCEL (ENSCHIG00000018085) #22	TECTA (ENSCHIG00000014187) #23	SC5D (ENSCHIG00000008144) #24	SORL1 (ENSCHIG00000020653) #25	UBASH3B (ENSCHIG00000027002) #29	CRTAM (ENSCHIG00000016236) #30	ENSCHIG00000017759	JHY (ENSCHIG00000006072) #31	BSX (ENSCHIG00000002885) #32	HSPA8 (ENSCHIG00000017000) #33	CLMP (ENSCHIG00000010482) #34	GRAMD1B (ENSCHIG00000012464) #36	SCN3B (ENSCHIG00000006052) #37	ZNF202 (ENSCHIG00000026799)	SAAL1 (ENSCHIG00000014782)	TPH1 (ENSCHIG00000022168)
Rambouillet Sheep	MODERN SPECIES	6	CCDC153 (ENSOARG00020014765)	CBL (ENSOARG00020014821)	MCAM (ENSOARG00020014906)	RNF26 (ENSOARG00020014994)	C1QTNF5 (ENSOARG00020015019)	MFRP (ENSOARG00020015077)	USP2 (ENSOARG00020015401)	THY1 (ENSOARG00020016169)	NECTIN1 (ENSOARG00020016261)	TRIM29 (ENSOARG00020016323)	OAF (ENSOARG00020016492)	POU2F3 (ENSOARG00020016577)	TLCD5 (ENSOARG00020016719)	ARHGEF12 (ENSOARG00020016798)	GRIK4 (ENSOARG00020018709) #21	TBCEL (ENSOARG00020018884) #22	TECTA (ENSOARG00020018982) #23	SC5D (ENSOARG00020019328) #24	SORL1 (ENSOARG00020019410) #25	ENSOARG00020019983	ENSOARG00020020082	UBASH3B (ENSOARG00020020117) #29	CRTAM (ENSOARG00020020211) #30	JHY (ENSOARG00020020294) #31	BSX (ENSOARG00020020411) #32	HSPA8 (ENSOARG00020020443) ##33	CLMP (ENSOARG00020020617) #34	GRAMD1B (ENSOARG00020020792) #36	SCN3B (ENSOARG00020022761) #37	ZNF202 (ENSOARG00020022786)	SAAL1 (ENSOARG00020022824)
Bovinae	ANCESTRAL SPECIES	21	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Bos	ANCESTRAL SPECIES	20	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00390000016654.c.b	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Bos_a	ANCESTRAL SPECIES	15	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b	ENSGT00950000182885.A.a
Domestic yak	MODERN SPECIES	4	CBL (ENSBGRG00000015641)	MCAM (ENSBGRG00000015317)	RNF26 (ENSBGRG00000015290)	C1QTNF5 (ENSBGRG00000015232)	MFRP (ENSBGRG00000014859)	USP2 (ENSBGRG00000014287)	THY1 (ENSBGRG00000014203)	NECTIN1 (ENSBGRG00000013920)	TRIM29 (ENSBGRG00000013713)	OAF (ENSBGRG00000013639)	POU2F3 (ENSBGRG00000013401)	TLCD5 (ENSBGRG00000013334)	ARHGEF12 (ENSBGRG00000012502)	GRIK4 (ENSBGRG00000012244) #21	ENSBGRG00000012217	TBCEL (ENSBGRG00000012161) #22	TECTA (ENSBGRG00000012059) #23	SC5D (ENSBGRG00000011853) #24	SORL1 (ENSBGRG00000011099) #25	ENSBGRG00000011053	UBASH3B (ENSBGRG00000010659) #29	CRTAM (ENSBGRG00000015363) #30	JHY (ENSBGRG00000015236) #31	ENSBGRG00000015174	BSX (ENSBGRG00000015127) #32	ENSBGRG00000015071	HSPA8 (ENSBGRG00000014719) ##33	CLMP (ENSBGRG00000014616) #34	GRAMD1B (ENSBGRG00000013095) #36	SCN3B (ENSBGRG00000012965) #37	ZNF202 (ENSBGRG00000012911)
Wild yak	MODERN SPECIES	884	CBL (ENSBMUG00000010504)	MCAM (ENSBMUG00000010212)	RNF26 (ENSBMUG00000010055)	C1QTNF5 (ENSBMUG00000010047)	MFRP (ENSBMUG00000010026)	USP2 (ENSBMUG00000009990)	THY1 (ENSBMUG00000009971)	NECTIN1 (ENSBMUG00000009949)	TRIM29 (ENSBMUG00000009933)	OAF (ENSBMUG00000009919)	POU2F3 (ENSBMUG00000009903)	TLCD5 (ENSBMUG00000009897)	ARHGEF12 (ENSBMUG00000009803)	GRIK4 (ENSBMUG00000009668) #21	ENSBMUG00000009640	TBCEL (ENSBMUG00000009635) #22	TECTA (ENSBMUG00000009605) #23	SC5D (ENSBMUG00000009572) #24	ENSBMUG00000009562	SORL1 (ENSBMUG00000009532) #25
Bos_b	ANCESTRAL SPECIES	19	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00390000016654.c.b	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT00390000004737.b.a.o.a.a.a.b	ENSGT00390000004737.b.b
Hybrid Bos Indicus	MODERN SPECIES	6	MCAM (ENSBIXG00005028409)	RNF26 (ENSBIXG00005028424)	ENSBIXG00005028447	MFRP (ENSBIXG00005028475)	USP2 (ENSBIXG00005028585)	ENSBIXG00005004947	NECTIN1 (ENSBIXG00005028659)	TRIM29 (ENSBIXG00005028730)	OAF (ENSBIXG00005028761)	POU2F3 (ENSBIXG00005028778)	TLCD5 (ENSBIXG00005028810)	ARHGEF12 (ENSBIXG00005028875)	GRIK4 (ENSBIXG00005028909) #21	ENSBIXG00005028935	ENSBIXG00005002177	TBCEL (ENSBIXG00005028967) #22	TECTA (ENSBIXG00005005131) #23	SC5D (ENSBIXG00005005176) #24	ENSBIXG00005005191	SORL1 (ENSBIXG00005005228) #25	UBASH3B (ENSBIXG00005011282) #29	CRTAM (ENSBIXG00005011302) #30	JHY (ENSBIXG00005011352) #31	BSX (ENSBIXG00005011376) #32	ENSBIXG00005011538 #33	CLMP (ENSBIXG00005011593) #34	GRAMD1B (ENSBIXG00005011762) #36	SCN3B (ENSBIXG00005011870) #37	ZNF202 (ENSBIXG00005001192)	ENSBIXG00005001194	ENSBIXG00005011988
Cow	MODERN SPECIES	6	CBL (ENSBTAG00000006817)	MCAM (ENSBTAG00000006835)	RNF26 (ENSBTAG00000012562)	C1QTNF5 (ENSBTAG00000027766)	MFRP (ENSBTAG00000009748)	USP2 (ENSBTAG00000009749)	THY1 (ENSBTAG00000019627)	NECTIN1 (ENSBTAG00000015939)	TRIM29 (ENSBTAG00000009419)	OAF (ENSBTAG00000021338)	POU2F3 (ENSBTAG00000021340)	TLCD5 (ENSBTAG00000021342)	ARHGEF12 (ENSBTAG00000021343)	GRIK4 (ENSBTAG00000017146) #21	ENSBTAG00000040051	TBCEL (ENSBTAG00000018213) #22	TECTA (ENSBTAG00000004456) #23	SC5D (ENSBTAG00000019246) #24	ENSBTAG00000051189	SORL1 (ENSBTAG00000014611) #25	ENSBTAG00000053620	UBASH3B (ENSBTAG00000000842) #29	CRTAM (ENSBTAG00000005193) #30	JHY (ENSBTAG00000013989) #31	BSX (ENSBTAG00000013994) #32	HSPA8 (ENSBTAG00000013162) #33	CLMP (ENSBTAG00000020046) #34	GRAMD1B (ENSBTAG00000001410) #36	SCN3B (ENSBTAG00000016768) #37	ZNF202 (ENSBTAG00000016684)	ENSBTAG00000050079
American bison	MODERN SPECIES	3365	MCAM (ENSBBBG00000005312)	RNF26 (ENSBBBG00000019308)	C1QTNF5 (ENSBBBG00000005005)	MFRP (ENSBBBG00000019292)	USP2 (ENSBBBG00000004970)	THY1 (ENSBBBG00000004930)	NECTIN1 (ENSBBBG00000019134)	ENSBBBG00000007098	ENSBBBG00000019100	OAF (ENSBBBG00000009157)	POU2F3 (ENSBBBG00000004883)	TLCD5 (ENSBBBG00000009156)	ARHGEF12 (ENSBBBG00000019004)	GRIK4 (ENSBBBG00000018764) #21	ENSBBBG00000018675	TBCEL (ENSBBBG00000018659) #22	TECTA (ENSBBBG00000018626) #23	SC5D (ENSBBBG00000018532) #24	ENSBBBG00000018510	SORL1 (ENSBBBG00000018493) #25	ENSBBBG00000018379	UBASH3B (ENSBBBG00000018323) #29	CRTAM (ENSBBBG00000018292) #30	JHY (ENSBBBG00000018276) #31	BSX (ENSBBBG00000018188) #32	ENSBBBG00000018029 #33	CLMP (ENSBBBG00000016837) #34	GRAMD1B (ENSBBBG00000000719) #36	SCN3B (ENSBBBG00000016043) #37	ZNF202 (ENSBBBG00000016005)	SAAL1 (ENSBBBG00000015979)
Siberian musk deer	MODERN SPECIES	1170	CBL (ENSMMSG00000015560)	MCAM (ENSMMSG00000015525)	RNF26 (ENSMMSG00000015517)	C1QTNF5 (ENSMMSG00000015493)	MFRP (ENSMMSG00000015373)	USP2 (ENSMMSG00000015190)	THY1 (ENSMMSG00000015155)	NECTIN1 (ENSMMSG00000015129)	TRIM29 (ENSMMSG00000015084)	OAF (ENSMMSG00000015066)	POU2F3 (ENSMMSG00000015001)	TLCD5 (ENSMMSG00000020817)	ARHGEF12 (ENSMMSG00000020588)	GRIK4 (ENSMMSG00000020477) #21	ENSMMSG00000020453	TBCEL (ENSMMSG00000020395) #22	TECTA (ENSMMSG00000020368) #23	SC5D (ENSMMSG00000020336) #24	SORL1 (ENSMMSG00000019969) #25	ENSMMSG00000019895	UBASH3B (ENSMMSG00000019850) #29	ENSMMSG00000019827	CRTAM (ENSMMSG00000019788) #30	JHY (ENSMMSG00000019753) #31	BSX (ENSMMSG00000019731) #32	ENSMMSG00000019680 ##33	CLMP (ENSMMSG00000019631) #34	GRAMD1B (ENSMMSG00000016337) #36	SCN3B (ENSMMSG00000016197) #37	ZNF202 (ENSMMSG00000016172)	ENSMMSG00000016147
Yarkand deer	MODERN SPECIES		CCDC153 (ENSCHYG00000007504)	CBL (ENSCHYG00000007532)	MCAM (ENSCHYG00000007589)	RNF26 (ENSCHYG00000007679)	C1QTNF5 (ENSCHYG00000007870)	MFRP (ENSCHYG00000007705)	USP2 (ENSCHYG00000007946)	THY1 (ENSCHYG00000008269)	NECTIN1 (ENSCHYG00000008304)	TRIM29 (ENSCHYG00000008335)	OAF (ENSCHYG00000008424)	POU2F3 (ENSCHYG00000008441)	TLCD5 (ENSCHYG00000008461)	ARHGEF12 (ENSCHYG00000008536)	GRIK4 (ENSCHYG00000009278) #21	TBCEL (ENSCHYG00000009677) #22	TECTA (ENSCHYG00000009743) #23	SC5D (ENSCHYG00000010091) #24	SORL1 (ENSCHYG00000010203) #25	UBASH3B (ENSCHYG00000010800) #29	CRTAM (ENSCHYG00000010922) #30	JHY (ENSCHYG00000011012) #31	BSX (ENSCHYG00000011105) #32	ENSCHYG00000011140	HSPA8 (ENSCHYG00000011182) ##33	CLMP (ENSCHYG00000011450) #34	GRAMD1B (ENSCHYG00000011570) #36	SCN3B (ENSCHYG00000012415) #37	ZNF202 (ENSCHYG00000012502)	ENSCHYG00000012579	SAAL1 (ENSCHYG00000012719)
Laurasiatheria_b	ANCESTRAL SPECIES	1	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Carnivora	ANCESTRAL SPECIES	21	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Caniformia	ANCESTRAL SPECIES	17	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Caniformia_b	ANCESTRAL SPECIES	3	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Mustelinae	ANCESTRAL SPECIES	24	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00420000030019	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT01000000216167	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
American mink	MODERN SPECIES	71	CCDC153 (ENSNVIG00000002752)	CBL (ENSNVIG00000002683)	MCAM (ENSNVIG00000002496)	RNF26 (ENSNVIG00000002481)	C1QTNF5 (ENSNVIG00000002462)	MFRP (ENSNVIG00000002395)	USP2 (ENSNVIG00000002282)	THY1 (ENSNVIG00000002262)	NECTIN1 (ENSNVIG00000002195)	TRIM29 (ENSNVIG00000002143)	OAF (ENSNVIG00000002114)	POU2F3 (ENSNVIG00000002003)	TM136 (ENSNVIG00000001963)	ARHGEF12 (ENSNVIG00000001620)	GRIK4 (ENSNVIG00000001516) #21	TBCEL (ENSNVIG00000001499) #22	TECTA (ENSNVIG00000001443) #23	SC5D (ENSNVIG00000001398) #24	SORL1 (ENSNVIG00000001198) #25	UBASH3B (ENSNVIG00000001133) #29	CRTAM (ENSNVIG00000001111) #30	JHY (ENSNVIG00000001094) #31	BSX (ENSNVIG00000001086) #32	HSPA8 (ENSNVIG00000001020) ##33	CLMP (ENSNVIG00000001000) #34	GRAMD1B (ENSNVIG00000000282) #36	ENSNVIG00000000264	SCN3B (ENSNVIG00000000234) #37	ZNF202 (ENSNVIG00000000199)	OR6X1 (ENSNVIG00000000192)	OR6M1 (ENSNVIG00000000187)
Ferret	MODERN SPECIES	188	MCAM (ENSMPUG00000005440)	ENSMPUG00000005455	RNF26 (ENSMPUG00000019736)	C1QTNF5 (ENSMPUG00000005459)	ENSMPUG00000005466	USP2 (ENSMPUG00000005475)	THY1 (ENSMPUG00000005504)	ENSMPUG00000005548	NECTIN1 (ENSMPUG00000005556)	ENSMPUG00000005570	TRIM29 (ENSMPUG00000005576)	POU2F3 (ENSMPUG00000005584)	TLCD5 (ENSMPUG00000005596)	ARHGEF12 (ENSMPUG00000005607)	GRIK4 (ENSMPUG00000005636) #21	TBCEL (ENSMPUG00000005650) #22	TECTA (ENSMPUG00000005657) #23	SC5D (ENSMPUG00000005754) #24	SORL1 (ENSMPUG00000005763) #25	UBASH3B (ENSMPUG00000005787) #29	CRTAM (ENSMPUG00000005793) #30	JHY (ENSMPUG00000005798) #31	BSX (ENSMPUG00000005802) #32	ENSMPUG00000005810 #33	CLMP (ENSMPUG00000005860) #34	GRAMD1B (ENSMPUG00000005870) #36	SCN3B (ENSMPUG00000005898) #37	ZNF202 (ENSMPUG00000005930)	OR6X1 (ENSMPUG00000019737)	ENSMPUG00000019738	ENSMPUG00000019739
Ursidae	ANCESTRAL SPECIES	15	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352.d	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00950000186240	ENSGT00960000189557	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D
Ursus	ANCESTRAL SPECIES	17	ENSGT00950000182849.A.f.a	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352.d	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00950000186240	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Polar bear	MODERN SPECIES	166	ENSUMAG00000000611	HINFP (ENSUMAG00000000565)	ABCG4 (ENSUMAG00000000220)	NLRX1 (ENSUMAG00000000144)	CCDC153 (ENSUMAG00000000075)	CBL (ENSUMAG00000023576)	RNF26 (ENSUMAG00000023565)	MFRP (ENSUMAG00000023563)	USP2 (ENSUMAG00000023555)	THY1 (ENSUMAG00000023552)	TRIM29 (ENSUMAG00000023539)	POU2F3 (ENSUMAG00000023533)	TLCD5 (ENSUMAG00000023528)	ARHGEF12 (ENSUMAG00000023009)	GRIK4 (ENSUMAG00000022880) #21	TBCEL (ENSUMAG00000022868) #22	TECTA (ENSUMAG00000022830) #23	SC5D (ENSUMAG00000022821) #24	SORL1 (ENSUMAG00000022666) #25	ENSUMAG00000022567	UBASH3B (ENSUMAG00000022541) #29	CRTAM (ENSUMAG00000022530) #30	JHY (ENSUMAG00000022529) #31	BSX (ENSUMAG00000022525) #32	HSPA8 (ENSUMAG00000022513) ##33	CLMP (ENSUMAG00000022510) #34	GRAMD1B (ENSUMAG00000022493) #36	SCN3B (ENSUMAG00000022471) #37	ZNF202 (ENSUMAG00000022464)	OR6X1 (ENSUMAG00000022463)	OR6M1 (ENSUMAG00000022457)
American black bear	MODERN SPECIES	4261																TBCEL (ENSUAMG00000027034) #22
Giant Panda	MODERN SPECIES	18	CCDC153 (ENSAMEG00000000029)	CBL (ENSAMEG00000007928)	MCAM (ENSAMEG00000007839)	RNF26 (ENSAMEG00000019700)	MFRP (ENSAMEG00000007827)	USP2 (ENSAMEG00000007769)	THY1 (ENSAMEG00000007760)	NECTIN1 (ENSAMEG00000007738)	TRIM29 (ENSAMEG00000007978)	OAF (ENSAMEG00000008008)	POU2F3 (ENSAMEG00000008014)	TLCD5 (ENSAMEG00000030495)	ARHGEF12 (ENSAMEG00000008026)	GRIK4 (ENSAMEG00000008110) #21	ENSAMEG00000027075	TBCEL (ENSAMEG00000008181) #22	TECTA (ENSAMEG00000008198) #23	SC5D (ENSAMEG00000008222) #24	SORL1 (ENSAMEG00000008234) #25	ENSAMEG00000029575	ENSAMEG00000026326	ENSAMEG00000024416	UBASH3B (ENSAMEG00000008362) #29	CRTAM (ENSAMEG00000008395) #30	JHY (ENSAMEG00000008408) #31	BSX (ENSAMEG00000028689) #32	ENSAMEG00000008425 #33	CLMP (ENSAMEG00000008447) #34	GRAMD1B (ENSAMEG00000008453) #36	SCN3B (ENSAMEG00000026930) #37	ZNF202 (ENSAMEG00000008512)
Canidae	ANCESTRAL SPECIES	27	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00950000185617	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Canis_lupus	ANCESTRAL SPECIES	28	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00950000185617	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b.p #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Dingo	MODERN SPECIES	214	CCDC153 (ENSCAFG00020012660)	CBL (ENSCAFG00020012603)	MCAM (ENSCAFG00020012584)	RNF26 (ENSCAFG00020012581)	C1QTNF5 (ENSCAFG00020012580)	USP2 (ENSCAFG00020012545)	THY1 (ENSCAFG00020012540)	NECTIN1 (ENSCAFG00020012521)	TRIM29 (ENSCAFG00020012496)	OAF (ENSCAFG00020012492)	POU2F3 (ENSCAFG00020012481)	TLCD5 (ENSCAFG00020012475)	ENSCAFG00020012441	ENSCAFG00020012215	GRIK4 (ENSCAFG00020011891) #21	TBCEL (ENSCAFG00020011885) #22	TECTA (ENSCAFG00020011868) #23	SC5D (ENSCAFG00020011864) #24	SORL1 (ENSCAFG00020011461) #25	ENSCAFG00020011404	UBASH3B (ENSCAFG00020011374) #29	CRTAM (ENSCAFG00020011359) #30	JHY (ENSCAFG00020011354) #31	BSX (ENSCAFG00020011350) #32	HSPA8 (ENSCAFG00020011245) ##33	CLMP (ENSCAFG00020011236) #34	ENSCAFG00020011231 #36	GRAMD1B (ENSCAFG00020011227) #36	SCN3B (ENSCAFG00020011224) #37	ZNF202 (ENSCAFG00020011218)	OR6X1 (ENSCAFG00020011214)
Dog	MODERN SPECIES	33	ENSCAFG00845000259	CBL (ENSCAFG00845000222)	MCAM (ENSCAFG00845014732)	NLRX1 (ENSCAFG00845014678)	C1QTNF5 (ENSCAFG00845014649)	MFRP (ENSCAFG00845014601)	USP2 (ENSCAFG00845014492)	THY1 (ENSCAFG00845014436)	NECTIN1 (ENSCAFG00845014377)	TRIM29 (ENSCAFG00845014328)	OAF (ENSCAFG00845014309)	POU2F3 (ENSCAFG00845014297)	TLCD5 (ENSCAFG00845014260)	ARHGEF12 (ENSCAFG00845013924)	GRIK4 (ENSCAFG00845013650) #21	TBCEL (ENSCAFG00845013557) #22	TECTA (ENSCAFG00845013517) #23	SC5D (ENSCAFG00845013494) #24	SORL1 (ENSCAFG00845013384) #25	ENSCAFG00845013346	UBASH3B (ENSCAFG00845013209) #29	CRTAM (ENSCAFG00845013047) #30	JHY (ENSCAFG00845012996) #31	BSX (ENSCAFG00845012957) #32	HSPA8 (ENSCAFG00845012887) #33	CLMP (ENSCAFG00845012839) #34	GRAMD1B (ENSCAFG00845012564) #36	SCN3B (ENSCAFG00845012405) #37	ZNF202 (ENSCAFG00845012321)	OR6X1 (ENSCAFG00845012279)	OR6M1 (ENSCAFG00845012263)
Red fox	MODERN SPECIES	29	NHERF4 (ENSVVUG00000023122)	CCDC153 (ENSVVUG00000023120)	CBL (ENSVVUG00000022400)	MCAM (ENSVVUG00000022350)	RNF26 (ENSVVUG00000022340)	MFRP (ENSVVUG00000022327)	USP2 (ENSVVUG00000022312)	THY1 (ENSVVUG00000022309)	NECTIN1 (ENSVVUG00000022294)	TRIM29 (ENSVVUG00000022284)	OAF (ENSVVUG00000022279)	POU2F3 (ENSVVUG00000022257)	TMEM136 (ENSVVUG00000022256)	ARHGEF12 (ENSVVUG00000020838)	GRIK4 (ENSVVUG00000020755) #21	TBCEL (ENSVVUG00000020748) #22	TECTA (ENSVVUG00000020722) #23	SC5D (ENSVVUG00000020720) #24	SORL1 (ENSVVUG00000020705) #25	ENSVVUG00000020696	UBASH3B (ENSVVUG00000020669) #29	CRTAM (ENSVVUG00000020662) #30	JHY (ENSVVUG00000020658) #31	BSX (ENSVVUG00000020653) #32	ENSVVUG00000020637 ##33	CLMP (ENSVVUG00000020635) #34	GRAMD1B (ENSVVUG00000020626) #36	SCN3B (ENSVVUG00000020621) #37	ZNF202 (ENSVVUG00000020619)	OR6X1 (ENSVVUG00000020617)	OR6M1 (ENSVVUG00000020615)
Felidae	ANCESTRAL SPECIES		ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.e #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a.i
Cat	MODERN SPECIES	241	CCDC153 (ENSFCAG00000001169)	CBL (ENSFCAG00000004737)	MCAM (ENSFCAG00000000977)	C1QTNF5 (ENSFCAG00000030303)	RNF26 (ENSFCAG00000000978)	MFRP (ENSFCAG00000000979)	USP2 (ENSFCAG00000000980)	THY1 (ENSFCAG00000042154)	NECTIN1 (ENSFCAG00000005493)	TRIM29 (ENSFCAG00000003353)	OAF (ENSFCAG00000032399)	POU2F3 (ENSFCAG00000003355)	TLCD5 (ENSFCAG00000024604)	ARHGEF12 (ENSFCAG00000026560)	GRIK4 (ENSFCAG00000003358) #21	TBCEL (ENSFCAG00000013489) #22	TECTA (ENSFCAG00000013490) #23	ENSFCAG00000048683	SC5D (ENSFCAG00000034641) #24	SORL1 (ENSFCAG00000013217) #25	UBASH3B (ENSFCAG00000031213) #29	CRTAM (ENSFCAG00000001126) #30	JHY (ENSFCAG00000001129) #31	HSPA8 (ENSFCAG00000001132) ##33	BSX (ENSFCAG00000006241) #32	ENSFCAG00000026351	CLMP (ENSFCAG00000001133) #34	GRAMD1B (ENSFCAG00000004317) #36	SCN3B (ENSFCAG00000000425) #37	ZNF202 (ENSFCAG00000034748)	OR6M1 (ENSFCAG00000046786)
Panthera	ANCESTRAL SPECIES	26	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.e #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00980000198875.c	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Tiger	MODERN SPECIES	13	CCDC153 (ENSPTIG00000015849)	CBL (ENSPTIG00000015783)	RNF26 (ENSPTIG00000008309)	C1QTNF5 (ENSPTIG00000015743)	MFRP (ENSPTIG00000015721)	USP2 (ENSPTIG00000015669)	THY1 (ENSPTIG00000015612)	NECTIN1 (ENSPTIG00000015599)	TRIM29 (ENSPTIG00000015571)	OAF (ENSPTIG00000015562)	POU2F3 (ENSPTIG00000015534)	TLCD5 (ENSPTIG00000015442)	ARHGEF12 (ENSPTIG00000015278)	GRIK4 (ENSPTIG00000014961) #21	ENSPTIG00000014945	TBCEL (ENSPTIG00000014908) #22
Panthera_a	ANCESTRAL SPECIES	29	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101.e #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00980000198875.c	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a.i
leopard	MODERN SPECIES	54	CCDC153 (ENSPPRG00000007675)	CBL (ENSPPRG00000009844)	MCAM (ENSPPRG00000010672)	RNF26 (ENSPPRG00000022099)	C1QTNF5 (ENSPPRG00000011048)	MFRP (ENSPPRG00000011877)	USP2 (ENSPPRG00000013010)	THY1 (ENSPPRG00000015977)	NECTIN1 (ENSPPRG00000017826)	TRIM29 (ENSPPRG00000019820)	OAF (ENSPPRG00000022567)	POU2F3 (ENSPPRG00000023658)	TLCD5 (ENSPPRG00000022930)	ARHGEF12 (ENSPPRG00000004218)	GRIK4 (ENSPPRG00000006092) #21	TBCEL (ENSPPRG00000007802) #22	TECTA (ENSPPRG00000009748) #23	ENSPPRG00000010468 #24	SORL1 (ENSPPRG00000020645) #25	UBASH3B (ENSPPRG00000024351) #29	CRTAM (ENSPPRG00000024170) #30	JHY (ENSPPRG00000023986) #31
lion	MODERN SPECIES	10	CBL (ENSPLOG00000005824)	MCAM (ENSPLOG00000005884)	RNF26 (ENSPLOG00000005943)	C1QTNF5 (ENSPLOG00000005959)	MFRP (ENSPLOG00000006036)	USP2 (ENSPLOG00000006177)	THY1 (ENSPLOG00000006342)	NECTIN1 (ENSPLOG00000006382)	TRIM29 (ENSPLOG00000006434)	OAF (ENSPLOG00000006530)	POU2F3 (ENSPLOG00000006570)	TLCD5 (ENSPLOG00000006628)	ARHGEF12 (ENSPLOG00000006756)	GRIK4 (ENSPLOG00000007172) #21	ENSPLOG00000007266	TBCEL (ENSPLOG00000007366) #22	TECTA (ENSPLOG00000007404) #23	SC5D (ENSPLOG00000007547) #24	SORL1 (ENSPLOG00000007608) #25	UBASH3B (ENSPLOG00000008090) #29	CRTAM (ENSPLOG00000008145) #30	JHY (ENSPLOG00000008226) #31	BSX (ENSPLOG00000008276) #32	ENSPLOG00000008306 #33	CLMP (ENSPLOG00000008353) #34	GRAMD1B (ENSPLOG00000008476) #36	SCN3B (ENSPLOG00000008777) #37	ZNF202 (ENSPLOG00000008819)	OR6M1 (ENSPLOG00000008893)	ENSPLOG00000008906	ENSPLOG00000008917
Laurasiatheria_c	ANCESTRAL SPECIES	23	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564
Equus	ANCESTRAL SPECIES	25	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT00390000011564.h
Donkey	MODERN SPECIES	12	USP2 (ENSEASG00005003919)	ENSEASG00005003918	ENSEASG00005038029	ENSEASG00005035326	ENSEASG00005017928	ENSEASG00005032922	ENSEASG00005024636	ENSEASG00005003916	TRIM29 (ENSEASG00005003906)	OAF (ENSEASG00005003899)	POU2F3 (ENSEASG00005003896)	TLCD5 (ENSEASG00005030821)	ARHGEF12 (ENSEASG00005002995)	ENSEASG00005002823	GRIK4 (ENSEASG00005002813) #21	TBCEL (ENSEASG00005002804) #22	TECTA (ENSEASG00005002795) #23	SC5D (ENSEASG00005002790) #24	SORL1 (ENSEASG00005002655) #25	UBASH3B (ENSEASG00005002600) #29	CRTAM (ENSEASG00005002593) #30	JHY (ENSEASG00005002588) #31	BSX (ENSEASG00005002587) #32	ENSEASG00005024430	HSPA8 (ENSEASG00005002578) ##33	CLMP (ENSEASG00005002573) #34	ENSEASG00005029718 #36	GRAMD1B (ENSEASG00005002562) #36	SCN3B (ENSEASG00005002556) #37	ZNF202 (ENSEASG00005002550)	OR6X1 (ENSEASG00005002546)
Horse	MODERN SPECIES	28	NHERF4 (ENSECAG00000023570)	CCDC153 (ENSECAG00000001230)	CBL (ENSECAG00000003448)	MCAM (ENSECAG00000013036)	RNF26 (ENSECAG00000053692)	MFRP (ENSECAG00000018171)	USP2 (ENSECAG00000019869)	THY1 (ENSECAG00000009966)	NECTIN1 (ENSECAG00000010624)	TRIM29 (ENSECAG00000013651)	OAF (ENSECAG00000053118)	POU2F3 (ENSECAG00000019818)	TLCD5 (ENSECAG00000022595)	ARHGEF12 (ENSECAG00000022702)	GRIK4 (ENSECAG00000017491) #21	TBCEL (ENSECAG00000012963) #22	TECTA (ENSECAG00000016222) #23	SC5D (ENSECAG00000018059) #24	SORL1 (ENSECAG00000019083) #25	UBASH3B (ENSECAG00000036956) #29	ENSECAG00000031203 #30	ENSECAG00000032189 #31	ENSECAG00000036316 #32	HSPA8 (ENSECAG00000037704) ##33	ENSECAG00000054464	ENSECAG00000049832	CLMP (ENSECAG00000032864) #34	UBASH3B (ENSECAG00000018634) #29	CRTAM (ENSECAG00000007708) #30	JHY (ENSECAG00000010865) #31	ENSECAG00000031197 #32
Chiroptera	ANCESTRAL SPECIES	82															ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00940000159961
Megabat	MODERN SPECIES	1473																TBCEL (ENSPVAG00000011725) #22	TECTA (ENSPVAG00000011726) #23
Microchiroptera	ANCESTRAL SPECIES	9															ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00520000061087	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.c.a.a ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT00940000157165
Greater horseshoe bat	MODERN SPECIES	17															GRIK4 (ENSRFEG00010014694) #21	TBCEL (ENSRFEG00010014632) #22	TECTA (ENSRFEG00010013932) #23	SC5D (ENSRFEG00010013870) #24	ENSRFEG00010013798	SORL1 (ENSRFEG00010013333) #25	ENSRFEG00010013253	ENSRFEG00010013201	UBASH3B (ENSRFEG00010012940) #29	CRTAM (ENSRFEG00010012798) #30	JHY (ENSRFEG00010012752) #31	BSX (ENSRFEG00010012685) #32	ENSRFEG00010012665	CLMP (ENSRFEG00010012631) #34	ENSRFEG00010012617	GRAMD1B (ENSRFEG00010012293) #36	SCN3B (ENSRFEG00010012233) #37
Microbat	MODERN SPECIES	1418															GRIK4 (ENSMLUG00000015614) #21	TBCEL (ENSMLUG00000015634) #22	TECTA (ENSMLUG00000013553) #23	SC5D (ENSMLUG00000013545) #24	ENSMLUG00000026089 #25
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Hedgehog	MODERN SPECIES	4895																TBCEL (ENSEEUG00000015741) #22
Common shrew	MODERN SPECIES	3775																TBCEL (ENSSARG00000000572) #22
Atlantogenata	ANCESTRAL SPECIES	54	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b	ENSGT01090000260086.B.a.a
Afrotheria	ANCESTRAL SPECIES	51	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000165588	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Afrotheria_a	ANCESTRAL SPECIES	46	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000165588	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00950000183206.b.c.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B.b
Elephant	MODERN SPECIES	464	CBL (ENSLAFG00000007171)	MCAM (ENSLAFG00000007173)	RNF26 (ENSLAFG00000000879)	C1QTNF5 (ENSLAFG00000020705)	ENSLAFG00000000881	USP2 (ENSLAFG00000006018)	THY1 (ENSLAFG00000016895)	NECTIN1 (ENSLAFG00000028118)	TRIM29 (ENSLAFG00000022667)	OAF (ENSLAFG00000028646)	POU2F3 (ENSLAFG00000007476)	TLCD5 (ENSLAFG00000012330)	ENSLAFG00000032106	ARHGEF12 (ENSLAFG00000013288)	GRIK4 (ENSLAFG00000017260) #21	TBCEL (ENSLAFG00000017879) #22	TECTA (ENSLAFG00000022861) #23	SC5D (ENSLAFG00000011651) #24	SORL1 (ENSLAFG00000009079) #25	UBASH3B (ENSLAFG00000010479) #29	CRTAM (ENSLAFG00000021697) #30	ENSLAFG00000014733 #31	BSX (ENSLAFG00000014738) #32	ENSLAFG00000030312 ##33	CLMP (ENSLAFG00000001727) #34	GRAMD1B (ENSLAFG00000000362) #36	SCN3B (ENSLAFG00000000365) #37	ZNF202 (ENSLAFG00000008599)	ENSLAFG00000021715	ENSLAFG00000021746	ENSLAFG00000021890
Hyrax	MODERN SPECIES	3994																TBCEL (ENSPCAG00000003519) #22
Tenrec	MODERN SPECIES	4715																TBCEL (ENSETEG00000004035) #22
Xenarthra	ANCESTRAL SPECIES	48										ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b.d ##33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.B.a.a	ENSGT00390000011564	ENSGT00940000163057
Armadillo	MODERN SPECIES	1656									TRIM29 (ENSDNOG00000012707)	OAF (ENSDNOG00000043139)	ENSDNOG00000002152	TLCD5 (ENSDNOG00000049378)	ENSDNOG00000047963	ARHGEF12 (ENSDNOG00000000591)	GRIK4 (ENSDNOG00000030953) #21	TBCEL (ENSDNOG00000025797) #22	TECTA (ENSDNOG00000017684) #23	SC5D (ENSDNOG00000017691) #24	SORL1 (ENSDNOG00000012955) #25	UBASH3B (ENSDNOG00000012742) #29	CRTAM (ENSDNOG00000032151) #30	JHY (ENSDNOG00000007369) #31	BSX (ENSDNOG00000007244) #32	ENSDNOG00000039062 ##33	CLMP (ENSDNOG00000037200) #34	ENSDNOG00000036089	GRAMD1B (ENSDNOG00000018415) #36	SCN3B (ENSDNOG00000018419) #37	ZNF202 (ENSDNOG00000031856)	ENSDNOG00000003354	ENSDNOG00000000468
Sloth	MODERN SPECIES	4344																TBCEL (ENSCHOG00000002091) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B	ENSGT01040000240383.b.a.b
Opossum	MODERN SPECIES	3	CCDC153 (ENSMODG00000013236)	CBL (ENSMODG00000013232)	MCAM (ENSMODG00000013229)	RNF26 (ENSMODG00000013217)	C1QTNF5 (ENSMODG00000013215)	ENSMODG00000044117	USP2 (ENSMODG00000013213)	THY1 (ENSMODG00000013188)	NECTIN1 (ENSMODG00000013186)	TRIM29 (ENSMODG00000013171)	OAF (ENSMODG00000044397)	POU2F3 (ENSMODG00000013141)	TLCD5 (ENSMODG00000013138)	ARHGEF12 (ENSMODG00000013134)	GRIK4 (ENSMODG00000013079) #21	TBCEL (ENSMODG00000013041) #22	TECTA (ENSMODG00000013037) #23	ENSMODG00000029150	SC5D (ENSMODG00000013028) #24	SORL1 (ENSMODG00000013024) #25	ENSMODG00000024527	UBASH3B (ENSMODG00000012999) #29	CRTAM (ENSMODG00000012990) #30	JHY (ENSMODG00000012966) #31	BSX (ENSMODG00000012962) #32	HSPA8 (ENSMODG00000012958) #33	CLMP (ENSMODG00000012950) #34	GRAMD1B (ENSMODG00000012947) #36	SCN3B (ENSMODG00000012935) #37	ZNF202 (ENSMODG00000012927)	OR6X1 (ENSMODG00000012908)
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01090000260086.B	ENSGT01040000240383.b.a.b
Diprotodontia	ANCESTRAL SPECIES	40	ENSGT00950000182849.A.f.a	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01040000240383.b.a.b	ENSGT01090000260086.A.c.a.a.a.b	ENSGT01050000244869.a.a.b
Diprotodontia_a	ANCESTRAL SPECIES	39	ENSGT00950000182849.A.f.a	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000161189	ENSGT01090000260086.D	ENSGT01040000240383.b.a.b	ENSGT01090000260086.A.c.a.a.a.b	ENSGT01050000244869.a.a.b
Common wonbat	MODERN SPECIES	1052	NLRX1 (ENSVURG00010003670)	NHERF4 (ENSVURG00010003654)	CBL (ENSVURG00010003598)	MCAM (ENSVURG00010003552)	RNF26 (ENSVURG00010003541)	C1QTNF5 (ENSVURG00010003536)	USP2 (ENSVURG00010003460)	THY1 (ENSVURG00010003441)	NECTIN1 (ENSVURG00010003411)	TRIM29 (ENSVURG00010003363)	OAF (ENSVURG00010003349)	POU2F3 (ENSVURG00010003340)	TLCD5 (ENSVURG00010003305)	ARHGEF12 (ENSVURG00010003131)	GRIK4 (ENSVURG00010003011) #21	TBCEL (ENSVURG00010002935) #22	TECTA (ENSVURG00010002863) #23	SC5D (ENSVURG00010002831) #24	ENSVURG00010002811	SORL1 (ENSVURG00010002765) #25	UBASH3B (ENSVURG00010002649) #29	CRTAM (ENSVURG00010002637) #30	ENSVURG00010002631 #31	BSX (ENSVURG00010002607) #32	CLMP (ENSVURG00010002582) #34	GRAMD1B (ENSVURG00010002248) #36	SCN3B (ENSVURG00010002195) #37	ENSVURG00010002191	ENSVURG00010002184	OR6X1 (ENSVURG00010002173)	OR8D4 (ENSVURG00010002161)
koala	MODERN SPECIES	18	NHERF4 (ENSPCIG00000022818)	CBL (ENSPCIG00000022527)	MCAM (ENSPCIG00000022511)	RNF26 (ENSPCIG00000022507)	C1QTNF5 (ENSPCIG00000022506)	MFRP (ENSPCIG00000022502)	USP2 (ENSPCIG00000022496)	THY1 (ENSPCIG00000022493)	NECTIN1 (ENSPCIG00000031350)	TRIM29 (ENSPCIG00000030589)	OAF (ENSPCIG00000018076)	POU2F3 (ENSPCIG00000018077)	TLCD5 (ENSPCIG00000018079)	ARHGEF12 (ENSPCIG00000015198)	GRIK4 (ENSPCIG00000006247) #21	TBCEL (ENSPCIG00000006246) #22	TECTA (ENSPCIG00000006191) #23	SC5D (ENSPCIG00000006181) #24	ENSPCIG00000006177	ENSPCIG00000006164	UBASH3B (ENSPCIG00000002857) #29	CRTAM (ENSPCIG00000002839) #30	JHY (ENSPCIG00000003894) #31	BSX (ENSPCIG00000019710) #32	CLMP (ENSPCIG00000036965) #34	GRAMD1B (ENSPCIG00000002709) #36	SCN3B (ENSPCIG00000002658) #37	ZNF202 (ENSPCIG00000031118)	OR6X1 (ENSPCIG00000028224)	ENSPCIG00000035978	OR6T1 (ENSPCIG00000014891)
Wallaby	MODERN SPECIES	5981																TBCEL (ENSMEUG00000004586) #22
Tasmanian devil	MODERN SPECIES	2	NHERF4 (ENSSHAG00000009119)	CCDC153 (ENSSHAG00000009069)	CBL (ENSSHAG00000008028)	MCAM (ENSSHAG00000007967)	RNF26 (ENSSHAG00000025818)	ENSSHAG00000007088	USP2 (ENSSHAG00000006515)	THY1 (ENSSHAG00000027056)	NECTIN1 (ENSSHAG00000018845)	TRIM29 (ENSSHAG00000018427)	OAF (ENSSHAG00000024042)	POU2F3 (ENSSHAG00000018198)	TLCD5 (ENSSHAG00000024900)	ARHGEF12 (ENSSHAG00000017964)	GRIK4 (ENSSHAG00000017028) #21	TBCEL (ENSSHAG00000024998) #22	TECTA (ENSSHAG00000016516) #23	ENSSHAG00000029985 #24	SORL1 (ENSSHAG00000015179) #25	UBASH3B (ENSSHAG00000007113) #29	CRTAM (ENSSHAG00000006510) #30	JHY (ENSSHAG00000004410) #31	BSX (ENSSHAG00000022673) #32	HSPA8 (ENSSHAG00000007499) #33	CLMP (ENSSHAG00000022410) #34	ENSSHAG00000025561 #36	GRAMD1B (ENSSHAG00000010353) #36	SCN3B (ENSSHAG00000020707) #37	ZNF202 (ENSSHAG00000020474)	OR6X1 (ENSSHAG00000009093)	OR6M1 (ENSSHAG00000001590)
Platypus	MODERN SPECIES	2	NHERF4 (ENSOANG00000012216)	CBL (ENSOANG00000039233)	ENSOANG00000043525	RNF26 (ENSOANG00000047434)	C1QTNF5 (ENSOANG00000045267)	MFRP (ENSOANG00000039682)	USP2 (ENSOANG00000004771)	THY1 (ENSOANG00000002126)	NECTIN1 (ENSOANG00000015255)	TRIM29 (ENSOANG00000047154)	ENSOANG00000050807	POU2F3 (ENSOANG00000007198)	ENSOANG00000039823	ARHGEF12 (ENSOANG00000006268)	GRIK4 (ENSOANG00000006269) #21	TBCEL (ENSOANG00000048928) #22	TECTA (ENSOANG00000006272) #23	SC5D (ENSOANG00000005098) #24	SORL1 (ENSOANG00000001772) #25	ENSOANG00000036134	ENSOANG00000051318	ENSOANG00000012151	ENSOANG00000047565	ENSOANG00000043094	ENSOANG00000013077	ENSOANG00000001529	ENSOANG00000000151	PRSS27 (ENSOANG00000036919)	ENSOANG00000003896	ENSOANG00000047321	PRSS33 (ENSOANG00000000553)
Sauria	ANCESTRAL SPECIES	31	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Lepidosauria	ANCESTRAL SPECIES	20	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Episquamata	ANCESTRAL SPECIES	12	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Toxicofera	ANCESTRAL SPECIES	20	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00390000013354.d	ENSGT00940000156036	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Elapidae	ANCESTRAL SPECIES	15	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00390000013354.c.a.a	ENSGT00940000156036	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Elapidae_a	ANCESTRAL SPECIES	31	ENSGT00950000182849.A.f.a	ENSGT00390000016289	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Acanthophiinae	ANCESTRAL SPECIES	30	ENSGT00940000157853	ENSGT00940000159493	ENSGT00960000193219	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	165								NECTIN1 (ENSNSUG00000012087)	TRIM29 (ENSNSUG00000012086)	OAF (ENSNSUG00000012085)	POU2F3 (ENSNSUG00000012084)	ENSNSUG00000012083	ENSNSUG00000012082	ARHGEF12 (ENSNSUG00000012052)	GRIK4 (ENSNSUG00000012050) #21	ENSNSUG00000012048 #22	ENSNSUG00000012047 #22	ENSNSUG00000012046	TECTA (ENSNSUG00000012045) #23	SC5D (ENSNSUG00000012044) #24	SORL1 (ENSNSUG00000010918) #25	UBASH3B (ENSNSUG00000010894) #29	CRTAM (ENSNSUG00000010892) #30	BSX (ENSNSUG00000010890) #32
Mainland tiger snake	MODERN SPECIES	165							NECTIN1 (ENSNSUG00000012087)	TRIM29 (ENSNSUG00000012086)	OAF (ENSNSUG00000012085)	POU2F3 (ENSNSUG00000012084)	ENSNSUG00000012083	ENSNSUG00000012082	ARHGEF12 (ENSNSUG00000012052)	GRIK4 (ENSNSUG00000012050) #21	ENSNSUG00000012048 #22	ENSNSUG00000012047 #22	ENSNSUG00000012046	TECTA (ENSNSUG00000012045) #23	SC5D (ENSNSUG00000012044) #24	SORL1 (ENSNSUG00000010918) #25	UBASH3B (ENSNSUG00000010894) #29	CRTAM (ENSNSUG00000010892) #30	BSX (ENSNSUG00000010890) #32
Eastern brown snake	MODERN SPECIES	42	ENSPTXG00000004559	CBL (ENSPTXG00000004558)	MCAM (ENSPTXG00000004389)	RNF26 (ENSPTXG00000004383)	ENSPTXG00000004382	ENSPTXG00000004381	THY1 (ENSPTXG00000004378)	NECTIN1 (ENSPTXG00000004376)	TRIM29 (ENSPTXG00000004373)	OAF (ENSPTXG00000004369)	POU2F3 (ENSPTXG00000012182)	ENSPTXG00000012181	ENSPTXG00000012180	ARHGEF12 (ENSPTXG00000012178)	GRIK4 (ENSPTXG00000012172) #21	TBCEL (ENSPTXG00000012171) #22	TECTA (ENSPTXG00000012170) #23	SC5D (ENSPTXG00000012169) #24	ENSPTXG00000012168	ENSPTXG00000012167	SORL1 (ENSPTXG00000012166) #25	UBASH3B (ENSPTXG00000012164) #29	CRTAM (ENSPTXG00000012163) #30	JHY (ENSPTXG00000012162) #31	BSX (ENSPTXG00000012161) #32	HSPA8 (ENSPTXG00000012159) #33	CLMP (ENSPTXG00000012158) #34	ENSPTXG00000012156 #36	ENSPTXG00000012155 #36	SCN3B (ENSPTXG00000012062) #37	ATP12A (ENSPTXG00000009618)
Blue-lipped sea krait	MODERN SPECIES	2321																TBCEL (ENSLLTG00000013415) #22	TECTA (ENSLLTG00000013440) #23
Indian cobra	MODERN SPECIES	7	RNF26 (ENSNNAG00000014134)	C1QTNF5 (ENSNNAG00000014122)	ENSNNAG00000014107	ENSNNAG00000014081	THY1 (ENSNNAG00000014060)	NECTIN1 (ENSNNAG00000014009)	ENSNNAG00000013998	TRIM29 (ENSNNAG00000013952)	OAF (ENSNNAG00000013922)	POU2F3 (ENSNNAG00000013905)	ENSNNAG00000013886	ENSNNAG00000013868	ARHGEF12 (ENSNNAG00000013779)	GRIK4 (ENSNNAG00000012933) #21	ENSNNAG00000012872	TBCEL (ENSNNAG00000012847) #22	ENSNNAG00000012821	TECTA (ENSNNAG00000012695) #23	SC5D (ENSNNAG00000012665) #24	ENSNNAG00000011634	UBASH3B (ENSNNAG00000011405) #29	CRTAM (ENSNNAG00000011365) #30	BSX (ENSNNAG00000011343) #32	HSPA8 (ENSNNAG00000011302) #33	CLMP (ENSNNAG00000011264) #34	ENSNNAG00000011211 #36	ENSNNAG00000011013 #36	SCN3B (ENSNNAG00000010959) #37	ATP12A (ENSNNAG00000010839)	B3GAT1 (ENSNNAG00000010801)	ACAD8 (ENSNNAG00000010638)
Lizard	MODERN SPECIES	6							ENSACAG00000003505	NECTIN1 (ENSACAG00000003487)	TRIM29 (ENSACAG00000041647)	OAF (ENSACAG00000003470)	POU2F3 (ENSACAG00000003384)	ENSACAG00000044380	ENSACAG00000003371	ARHGEF12 (ENSACAG00000003208)	GRIK4 (ENSACAG00000002979) #21	TBCEL (ENSACAG00000002788) #22	TECTA (ENSACAG00000002699) #23	SC5D (ENSACAG00000002668) #24	SORL1 (ENSACAG00000002367) #25	UBASH3B (ENSACAG00000004950) #29	CRTAM (ENSACAG00000004941) #30	BSX (ENSACAG00000004933) #32	HSPA8 (ENSACAG00000004884) #33	CLMP (ENSACAG00000004869) #34	ENSACAG00000042120 #36	ENSACAG00000004807 #36	SCN3B (ENSACAG00000004778) #37	ENSACAG00000038042	ENSACAG00000020981
Laterata	ANCESTRAL SPECIES	15	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00940000173536	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Common wall lizard	MODERN SPECIES	6	MFRP (ENSPMRG00000023068)	ENSPMRG00000023063	THY1 (ENSPMRG00000023060)	ENSPMRG00000023058	ENSPMRG00000023054	ENSPMRG00000023051	NECTIN1 (ENSPMRG00000023047)	TRIM29 (ENSPMRG00000023041)	ENSPMRG00000023037	OAF (ENSPMRG00000023035)	POU2F3 (ENSPMRG00000023020)	ENSPMRG00000023013	ENSPMRG00000023009	ARHGEF12 (ENSPMRG00000022786)	GRIK4 (ENSPMRG00000022683) #21	TBCEL (ENSPMRG00000022678) #22	TECTA (ENSPMRG00000022663) #23	SC5D (ENSPMRG00000022657) #24	SORL1 (ENSPMRG00000021795) #25	UBASH3B (ENSPMRG00000021567) #29	CRTAM (ENSPMRG00000021543) #30	BSX (ENSPMRG00000021537) #32	HSPA8 (ENSPMRG00000021522) #33	CLMP (ENSPMRG00000021515) #34	GRAMD1B (ENSPMRG00000021416) #36	SCN3B (ENSPMRG00000021392) #37	ENSPMRG00000021387	ENSPMRG00000021381	ATP12A (ENSPMRG00000017987)	ENSPMRG00000017461	B3GAT1 (ENSPMRG00000017454)
Argentine black and white tegu	MODERN SPECIES	42	CBL (ENSSMRG00000021908)	MCAM (ENSSMRG00000021909)	RNF26 (ENSSMRG00000021910)	C1QTNF5 (ENSSMRG00000021912)	MFRP (ENSSMRG00000021913)	USP2 (ENSSMRG00000021915)	THY1 (ENSSMRG00000021917)	NECTIN1 (ENSSMRG00000021920)	TRIM29 (ENSSMRG00000021922)	OAF (ENSSMRG00000021923)	POU2F3 (ENSSMRG00000021924)	ENSSMRG00000021925	ENSSMRG00000021926	ARHGEF12 (ENSSMRG00000021927)	GRIK4 (ENSSMRG00000021929) #21	TBCEL (ENSSMRG00000021930) #22	TECTA (ENSSMRG00000021931) #23	SC5D (ENSSMRG00000021932) #24	SORL1 (ENSSMRG00000021933) #25	UBASH3B (ENSSMRG00000021940) #29	CRTAM (ENSSMRG00000021941) #30	ENSSMRG00000021942	BSX (ENSSMRG00000021943) #32	HSPA8 (ENSSMRG00000021944) #33	CLMP (ENSSMRG00000021947) #34	GRAMD1B (ENSSMRG00000021948) #36	SCN3B (ENSSMRG00000021949) #37	ATP12A (ENSSMRG00000021951)	ENSSMRG00000022437	B3GAT1 (ENSSMRG00000022445)	ENSSMRG00000022446
tuatara	MODERN SPECIES	1213	NLRX1 (ENSSPUG00000011087)	NHERF4 (ENSSPUG00000011130)	CBL (ENSSPUG00000011147)	MCAM (ENSSPUG00000011168)	RNF26 (ENSSPUG00000011210)	ENSSPUG00000011238	THY1 (ENSSPUG00000011255)	NECTIN1 (ENSSPUG00000011269)	TRIM29 (ENSSPUG00000011288)	OAF (ENSSPUG00000011344)	POU2F3 (ENSSPUG00000011358)	ENSSPUG00000011370	ENSSPUG00000011376	ARHGEF12 (ENSSPUG00000011403)	GRIK4 (ENSSPUG00000011460) #21	TBCEL (ENSSPUG00000011484) #22	ENSSPUG00000011502	SC5D (ENSSPUG00000011538) #24	SORL1 (ENSSPUG00000011576) #25	UBASH3B (ENSSPUG00000011666) #29	BSX (ENSSPUG00000011708) #32	HSPA8 (ENSSPUG00000011726) #33	CLMP (ENSSPUG00000011862) #34	GRAMD1B (ENSSPUG00000011977) #36	SCN3B (ENSSPUG00000012208) #37	ATP12A (ENSSPUG00000012231)	B3GAT1 (ENSSPUG00000012253)	ENSSPUG00000012634	ACAD8 (ENSSPUG00000013767)	THYN1 (ENSSPUG00000013780)	VPS26B (ENSSPUG00000013787)
Archelosauria	ANCESTRAL SPECIES	31	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Archosauria	ANCESTRAL SPECIES	26	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Aves	ANCESTRAL SPECIES	32	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Neognathae	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Neognathae_b	DUPLICATION
Neognathae_b	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165
Neognathae_c	ANCESTRAL SPECIES	32	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Kakapo	MODERN SPECIES	7	CBL (ENSSHBG00005011194)	MCAM (ENSSHBG00005011257)	RNF26 (ENSSHBG00005011333)	C1QTNF5 (ENSSHBG00005011349)	MFRP (ENSSHBG00005011367)	ENSSHBG00005011430	THY1 (ENSSHBG00005011678)	NECTIN1 (ENSSHBG00005011697)	TRIM29 (ENSSHBG00005011725)	OAF (ENSSHBG00005011764)	POU2F3 (ENSSHBG00005011782)	ENSSHBG00005011819	ENSSHBG00005011843	ARHGEF12 (ENSSHBG00005011872)	GRIK4 (ENSSHBG00005011908) #21	ENSSHBG00005011930 #22	ENSSHBG00005011944 #22	TECTA (ENSSHBG00005011994) #23	SC5D (ENSSHBG00005012105) #24	SORL1 (ENSSHBG00005012547) #25	UBASH3B (ENSSHBG00005016614) #29	CRTAM (ENSSHBG00005016621) #30	BSX (ENSSHBG00005016628) #32	HSPA8 (ENSSHBG00005016629) #33	CLMP (ENSSHBG00005016644) #34	GRAMD1B (ENSSHBG00005016697) #36	SCN3B (ENSSHBG00005017191) #37	ATP12A (ENSSHBG00005017293)	TIRAP (ENSSHBG00005019523) #11	DCPS (ENSSHBG00005019525) #10	ST3GAL4 (ENSSHBG00005019527) #9
Passeriformes	ANCESTRAL SPECIES	28	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165
Passeriformes_d	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Medium ground finch	MODERN SPECIES	301														ARHGEF12 (ENSGFOG00000010915)	GRIK4 (ENSGFOG00000010779) #21	ENSGFOG00000010757 #22	ENSGFOG00000010753 #22	TECTA (ENSGFOG00000010719) #23	SC5D (ENSGFOG00000010713) #24	SORL1 (ENSGFOG00000010693) #25
Neognathae_b	ANCESTRAL SPECIES	29	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Passeriformes	ANCESTRAL SPECIES	28	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Passeriformes_d	ANCESTRAL SPECIES	29	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00960000189385	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Passeriformes_g	ANCESTRAL SPECIES	22	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Passeroidea	ANCESTRAL SPECIES	22	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Common canary	MODERN SPECIES	55	ABCG4 (ENSSCAG00000007902)	NLRX1 (ENSSCAG00000008011)	CBL (ENSSCAG00000008019)	MCAM (ENSSCAG00000008034)	C1QTNF5 (ENSSCAG00000008044)	ENSSCAG00000008049	THY1 (ENSSCAG00000008051)	NECTIN1 (ENSSCAG00000008062)	TRIM29 (ENSSCAG00000008069)	OAF (ENSSCAG00000008080)	POU2F3 (ENSSCAG00000008092)	ENSSCAG00000008104	ENSSCAG00000008112	ARHGEF12 (ENSSCAG00000008121)	GRIK4 (ENSSCAG00000008163) #21	TBCEL (ENSSCAG00000008181) #22	TECTA (ENSSCAG00000008199) #23	SC5D (ENSSCAG00000008238) #24	SORL1 (ENSSCAG00000008343) #25	ENSSCAG00000008502	UBASH3B (ENSSCAG00000008504) #29	ENSSCAG00000008509 #30
Zebra finch	MODERN SPECIES	17	MCAM (ENSTGUG00000000379)	RNF26 (ENSTGUG00000029048)	C1QTNF5 (ENSTGUG00000000385)	MFRP (ENSTGUG00000000387)	USP2 (ENSTGUG00000000390)	THY1 (ENSTGUG00000000398)	NECTIN1 (ENSTGUG00000020436)	TRIM29 (ENSTGUG00000000405)	OAF (ENSTGUG00000000407)	ENSTGUG00000028648	POU2F3 (ENSTGUG00000000410)	ENSTGUG00000013890	ENSTGUG00000029185	ARHGEF12 (ENSTGUG00000000421)	GRIK4 (ENSTGUG00000000432) #21	TBCEL (ENSTGUG00000000441) #22	TECTA (ENSTGUG00000000444) #23	SC5D (ENSTGUG00000024762) #24	SORL1 (ENSTGUG00000000462) #25	UBASH3B (ENSTGUG00000000479) #29	CRTAM (ENSTGUG00000000481) #30	ENSTGUG00000000485 #31	BSX (ENSTGUG00000000488) #32	HSPA8 (ENSTGUG00000000491) #33	ENSTGUG00000024233	CLMP (ENSTGUG00000019626) #34	ENSTGUG00000028855	GRAMD1B (ENSTGUG00000000497) #36	SCN3B (ENSTGUG00000000607) #37	ENSTGUG00000024774	ATP12A (ENSTGUG00000000609)
Medium ground finch	MODERN SPECIES	301													ARHGEF12 (ENSGFOG00000010915)	GRIK4 (ENSGFOG00000010779) #21	ENSGFOG00000010757 #22	ENSGFOG00000010753 #22	TECTA (ENSGFOG00000010719) #23	SC5D (ENSGFOG00000010713) #24	SORL1 (ENSGFOG00000010693) #25
Flycatcher	MODERN SPECIES	16	ENSFALG00000025586	C1QTNF5 (ENSFALG00000006071)	ENSFALG00000006060	THY1 (ENSFALG00000006049)	NECTIN1 (ENSFALG00000024285)	ENSFALG00000026494	TRIM29 (ENSFALG00000024938)	OAF (ENSFALG00000006018)	POU2F3 (ENSFALG00000006007)	ENSFALG00000023157	ENSFALG00000028007	ARHGEF12 (ENSFALG00000005981)	ENSFALG00000005988	ENSFALG00000025566	GRIK4 (ENSFALG00000005946) #21	TBCEL (ENSFALG00000028540) #22	ENSFALG00000023904	TECTA (ENSFALG00000005890) #23	ENSFALG00000027789	SC5D (ENSFALG00000026452) #24	SORL1 (ENSFALG00000005865) #25	ENSFALG00000028602	UBASH3B (ENSFALG00000005855) #29	CRTAM (ENSFALG00000005848) #30	ENSFALG00000005836 #31	BSX (ENSFALG00000005831) #32	HSPA8 (ENSFALG00000005812) #33	CLMP (ENSFALG00000005798) #34	GRAMD1B (ENSFALG00000005777) #36	SCN3B (ENSFALG00000005758) #37	ENSFALG00000005754
Great tit	MODERN SPECIES	16	NHERF4 (ENSPMJG00000008612)	CBL (ENSPMJG00000008613)	MCAM (ENSPMJG00000008615)	RNF26 (ENSPMJG00000008616)	C1QTNF5 (ENSPMJG00000008617)	USP2 (ENSPMJG00000008618)	THY1 (ENSPMJG00000008619)	NECTIN1 (ENSPMJG00000008621)	TRIM29 (ENSPMJG00000008626)	OAF (ENSPMJG00000008628)	POU2F3 (ENSPMJG00000008629)	ENSPMJG00000008630	ENSPMJG00000008631	ARHGEF12 (ENSPMJG00000008632)	GRIK4 (ENSPMJG00000008633) #21	TBCEL (ENSPMJG00000008634) #22	TECTA (ENSPMJG00000008635) #23	ENSPMJG00000008638	SC5D (ENSPMJG00000008639) #24	ENSPMJG00000008640	ENSPMJG00000008641	SORL1 (ENSPMJG00000008642) #25	UBASH3B (ENSPMJG00000008650) #29	CRTAM (ENSPMJG00000008651) #30	ENSPMJG00000008653 #31	BSX (ENSPMJG00000008654) #32	HSPA8 (ENSPMJG00000008655) #33	CLMP (ENSPMJG00000008659) #34	ENSPMJG00000008664 #36	ENSPMJG00000008666 #36	ENSPMJG00000008668 #37
Neognathae_c	ANCESTRAL SPECIES	32	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b.i #22	ENSGT00530000063405.b.j #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Kakapo	MODERN SPECIES	7	MCAM (ENSSHBG00005011257)	RNF26 (ENSSHBG00005011333)	C1QTNF5 (ENSSHBG00005011349)	MFRP (ENSSHBG00005011367)	ENSSHBG00005011430	THY1 (ENSSHBG00005011678)	NECTIN1 (ENSSHBG00005011697)	TRIM29 (ENSSHBG00005011725)	OAF (ENSSHBG00005011764)	POU2F3 (ENSSHBG00005011782)	ENSSHBG00005011819	ENSSHBG00005011843	ARHGEF12 (ENSSHBG00005011872)	GRIK4 (ENSSHBG00005011908) #21	ENSSHBG00005011930 #22	ENSSHBG00005011944 #22	TECTA (ENSSHBG00005011994) #23	SC5D (ENSSHBG00005012105) #24	SORL1 (ENSSHBG00005012547) #25	UBASH3B (ENSSHBG00005016614) #29	CRTAM (ENSSHBG00005016621) #30	BSX (ENSSHBG00005016628) #32	HSPA8 (ENSSHBG00005016629) #33	CLMP (ENSSHBG00005016644) #34	GRAMD1B (ENSSHBG00005016697) #36	SCN3B (ENSSHBG00005017191) #37	ATP12A (ENSSHBG00005017293)	TIRAP (ENSSHBG00005019523) #11	DCPS (ENSSHBG00005019525) #10	ST3GAL4 (ENSSHBG00005019527) #9	KIRREL3 (ENSSHBG00005019532) #8
Golden eagle	MODERN SPECIES	24	CBL (ENSACCG00020005804)	MCAM (ENSACCG00020005859)	RNF26 (ENSACCG00020005886)	C1QTNF5 (ENSACCG00020005898)	MFRP (ENSACCG00020005937)	USP2 (ENSACCG00020005974)	THY1 (ENSACCG00020005996)	NECTIN1 (ENSACCG00020006008)	TRIM29 (ENSACCG00020006042)	OAF (ENSACCG00020006074)	POU2F3 (ENSACCG00020006100)	ENSACCG00020006126	ENSACCG00020006138	ARHGEF12 (ENSACCG00020006191)	GRIK4 (ENSACCG00020006268) #21	TBCEL (ENSACCG00020006327) #22	TECTA (ENSACCG00020006351) #23	SC5D (ENSACCG00020006366) #24	SORL1 (ENSACCG00020006710) #25	ENSACCG00020007190	UBASH3B (ENSACCG00020007227) #29	CRTAM (ENSACCG00020007255) #30	JHY (ENSACCG00020007286) #31	BSX (ENSACCG00020007303) #32	HSPA8 (ENSACCG00020007315) #33	CLMP (ENSACCG00020007347) #34	ENSACCG00020007358 #36	ENSACCG00020007394 #36	SCN3B (ENSACCG00020007421) #37	ATP12A (ENSACCG00020007447)	B3GAT1 (ENSACCG00020007516)
Galloanserae	ANCESTRAL SPECIES	27	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Phasianidae	ANCESTRAL SPECIES	27	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Phasianidae_b	ANCESTRAL SPECIES	26	ENSGT00950000182849.A.f.a	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b
Turkey	MODERN SPECIES	18	NHERF4 (ENSMGAG00000002575)	CBL (ENSMGAG00000002406)	MCAM (ENSMGAG00000002474)	ENSMGAG00000021349	C1QTNF5 (ENSMGAG00000002395)	USP2 (ENSMGAG00000016773)	THY1 (ENSMGAG00000002600)	NECTIN1 (ENSMGAG00000002372)	TRIM29 (ENSMGAG00000002352)	OAF (ENSMGAG00000021741)	POU2F3 (ENSMGAG00000002316)	ENSMGAG00000022980	ENSMGAG00000020533	ARHGEF12 (ENSMGAG00000002234)	GRIK4 (ENSMGAG00000002074) #21	TBCEL (ENSMGAG00000002225) #22	ENSMGAG00000022127	TECTA (ENSMGAG00000002190) #23	SC5D (ENSMGAG00000002186) #24	SORL1 (ENSMGAG00000002011) #25	UBASH3B (ENSMGAG00000001969) #29	CRTAM (ENSMGAG00000001951) #30	JHY (ENSMGAG00000001944) #31	HSPA8 (ENSMGAG00000001929) #33	CLMP (ENSMGAG00000001891) #34	GRAMD1B (ENSMGAG00000001869) #36	SCN3B (ENSMGAG00000001846) #37	ENSMGAG00000001740	B3GAT1 (ENSMGAG00000001706)	ENSMGAG00000001651	ACAD8 (ENSMGAG00000001638)
Chicken	MODERN SPECIES	16	CBL (ENSGALG00010024138)	MCAM (ENSGALG00010024116)	C1QTNF5 (ENSGALG00010026120)	MFRP (ENSGALG00010026113)	USP2 (ENSGALG00010026090)	THY1 (ENSGALG00010026023)	NECTIN1 (ENSGALG00010026003)	RNF26 (ENSGALG00010025983)	TRIM29 (ENSGALG00010025978)	OAF (ENSGALG00010025963)	CCDC160 (ENSGALG00010025953)	TMEM136-1 (ENSGALG00010025939)	TMEM136 (ENSGALG00010025931)	ARHGEF12 (ENSGALG00010025907)	GRIK4 (ENSGALG00010025846) #21	TBCEL (ENSGALG00010025830) #22	ENSGALG00010025820	TECTA (ENSGALG00010025806) #23	SC5D (ENSGALG00010025799) #24	SORL1 (ENSGALG00010025753) #25	UBASH3B (ENSGALG00010025703) #29	CRTAM (ENSGALG00010025654) #30	JHY (ENSGALG00010025647) #31	BSX (ENSGALG00010025614) #32	HSPA8 (ENSGALG00010025592) #33	CLMP (ENSGALG00010025573) #34	GRAMD1B (ENSGALG00010025562) #36	SCN3B (ENSGALG00010025429) #37	ATP12A (ENSGALG00010025507)	B3GAT1 (ENSGALG00010025417)	ENSGALG00010025406
Japanese quail	MODERN SPECIES	16	CBL (ENSCJPG00005009306)	ENSCJPG00005009304	RNF26 (ENSCJPG00005009303)	C1QTNF5 (ENSCJPG00005009302)	MFRP (ENSCJPG00005009301)	USP2 (ENSCJPG00005009300)	THY1 (ENSCJPG00005009299)	NECTIN1 (ENSCJPG00005009298)	TRIM29 (ENSCJPG00005009297)	OAF (ENSCJPG00005009296)	POU2F3 (ENSCJPG00005009295)	ENSCJPG00005009294	ENSCJPG00005009293	ARHGEF12 (ENSCJPG00005009292)	GRIK4 (ENSCJPG00005008705) #21	TBCEL (ENSCJPG00005008704) #22	ENSCJPG00005008703	TECTA (ENSCJPG00005008677) #23	SC5D (ENSCJPG00005008674) #24	ENSCJPG00005008479	UBASH3B (ENSCJPG00005008472) #29	CRTAM (ENSCJPG00005008470) #30	JHY (ENSCJPG00005008469) #31	BSX (ENSCJPG00005008468) #32	HSPA8 (ENSCJPG00005008461) #33	CLMP (ENSCJPG00005008448) #34	GRAMD1B (ENSCJPG00005008447) #36	SCN3B (ENSCJPG00005008446) #37	ATP12A (ENSCJPG00005006649)	B3GAT1 (ENSCJPG00005006628)	ENSCJPG00005006627
Anatidae	ANCESTRAL SPECIES	30	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Pink-footed goose	MODERN SPECIES	385															GRIK4 (ENSABRG00000001143) #21	TBCEL (ENSABRG00000001105) #22	TECTA (ENSABRG00000000408) #23	SC5D (ENSABRG00000000375) #24	SORL1 (ENSABRG00000000323) #25
Duck	MODERN SPECIES	16	HMBS (ENSAPLG00000008426)	H2AX (ENSAPLG00000029655)	DPAGT1 (ENSAPLG00000010165)	C2CD2L (ENSAPLG00000009128)	ATP12A (ENSAPLG00000009590)	SCN3B (ENSAPLG00000010155) #37	ENSAPLG00000010327 #36	ENSAPLG00000016820 #36	CLMP (ENSAPLG00000010660) #34	HSPA8 (ENSAPLG00000010667) #33	BSX (ENSAPLG00000018698) #32	JHY (ENSAPLG00000010814) #31	CRTAM (ENSAPLG00000010895) #30	UBASH3B (ENSAPLG00000011138) #29	ENSAPLG00000013286 #25	TBCEL (ENSAPLG00000013944) #22	TECTA (ENSAPLG00000013764) #23	ENSAPLG00000021530	GRIK4 (ENSAPLG00000014007) #21	ARHGEF12 (ENSAPLG00000014925)	ENSAPLG00000015538	ENSAPLG00000031248	POU2F3 (ENSAPLG00000015548)	OAF (ENSAPLG00000000725)	TRIM29 (ENSAPLG00000000965)	NECTIN1 (ENSAPLG00000001931)	ENSAPLG00000020498	USP2 (ENSAPLG00000030018)	C1QTNF5 (ENSAPLG00000030270)	CBL (ENSAPLG00000013545)	NHERF4 (ENSAPLG00000016510)
African ostrich	MODERN SPECIES	573								NECTIN1 (ENSSCUG00000011428)	TRIM29 (ENSSCUG00000011431)	OAF (ENSSCUG00000011433)	POU2F3 (ENSSCUG00000011436)	ENSSCUG00000011437	ENSSCUG00000011438	ARHGEF12 (ENSSCUG00000011441)	GRIK4 (ENSSCUG00000011443) #21	TBCEL (ENSSCUG00000011444) #22	TECTA (ENSSCUG00000011452) #23	ENSSCUG00000011463	SC5D (ENSSCUG00000011465) #24	SORL1 (ENSSCUG00000011467) #25	UBASH3B (ENSSCUG00000011476) #29	CRTAM (ENSSCUG00000011479) #30	JHY (ENSSCUG00000011481) #31	HSPA8 (ENSSCUG00000011484) #33	CLMP (ENSSCUG00000011496) #34	GRAMD1B (ENSSCUG00000011501) #36	SCN3B (ENSSCUG00000011511) #37	ATP12A (ENSSCUG00000011693)	B3GAT1 (ENSSCUG00000012097)	ENSSCUG00000012100	ACAD8 (ENSSCUG00000012112)
Australian saltwater crocodile	MODERN SPECIES	54	CBL (ENSCPRG00005004074)	MCAM (ENSCPRG00005004056)	RNF26 (ENSCPRG00005004053)	C1QTNF5 (ENSCPRG00005004046)	USP2 (ENSCPRG00005003973)	ENSCPRG00005003962	NECTIN1 (ENSCPRG00005003948)	ENSCPRG00005003934	TRIM29 (ENSCPRG00005003931)	OAF (ENSCPRG00005003929)	POU2F3 (ENSCPRG00005003901)	ENSCPRG00005003895	ENSCPRG00005003892	ARHGEF12 (ENSCPRG00005003213)	GRIK4 (ENSCPRG00005003077) #21	TBCEL (ENSCPRG00005003004) #22	TECTA (ENSCPRG00005002909) #23	SC5D (ENSCPRG00005002893) #24	SORL1 (ENSCPRG00005002863) #25	UBASH3B (ENSCPRG00005002839) #29	CRTAM (ENSCPRG00005002830) #30	JHY (ENSCPRG00005002823) #31	HSPA8 (ENSCPRG00005002806) #33	CLMP (ENSCPRG00005002794) #34	SCN3B (ENSCPRG00005002791) #37	GRAMD1B (ENSCPRG00005002749) #36	ATP12A (ENSCPRG00005002737)	B3GAT1 (ENSCPRG00005002716)	ENSCPRG00005002701	ACAD8 (ENSCPRG00005002673)	THYN1 (ENSCPRG00005002659)
Cryptodira	ANCESTRAL SPECIES	32	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00940000157165	ENSGT00950000182942.b	ENSGT00940000157590
Testudinoidea	ANCESTRAL SPECIES	29	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00950000185908	ENSGT00940000157165	ENSGT00950000182942.b
Emydidae	ANCESTRAL SPECIES	42	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00390000002823 #31	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00950000185908	ENSGT00940000157165	ENSGT00950000182942.b
painted turtle	MODERN SPECIES	2419	MCAM (ENSCPBG00000007904)	ENSCPBG00000007914	RNF26 (ENSCPBG00000007918)	C1QTNF5 (ENSCPBG00000007926)	MFRP (ENSCPBG00000007932)	USP2 (ENSCPBG00000007945)	THY1 (ENSCPBG00000007958)	NECTIN1 (ENSCPBG00000007975)	TRIM29 (ENSCPBG00000008017)	OAF (ENSCPBG00000008027)	POU2F3 (ENSCPBG00000008035)	ENSCPBG00000008042	ENSCPBG00000008048	ARHGEF12 (ENSCPBG00000008441)	GRIK4 (ENSCPBG00000014090) #21	TBCEL (ENSCPBG00000014118) #22	TECTA (ENSCPBG00000014125) #23	SC5D (ENSCPBG00000014148) #24	SORL1 (ENSCPBG00000014172) #25	UBASH3B (ENSCPBG00000014962) #29	CRTAM (ENSCPBG00000014967) #30	JHY (ENSCPBG00000014972) #31	BSX (ENSCPBG00000014976) #32	HSPA8 (ENSCPBG00000014981) #33	CLMP (ENSCPBG00000014992) #34	GRAMD1B (ENSCPBG00000014998) #36	SCN3B (ENSCPBG00000015020) #37	ATP12A (ENSCPBG00000015067)	ENSCPBG00000017725	B3GAT1 (ENSCPBG00000017731)	ENSCPBG00000017751
Three-toed box turtle	MODERN SPECIES	167	MCAM (ENSTMTG00000007009)	RNF26 (ENSTMTG00000006991)	C1QTNF5 (ENSTMTG00000006980)	ENSTMTG00000006945	THY1 (ENSTMTG00000006932)	ENSTMTG00000006919	NECTIN1 (ENSTMTG00000006898)	TRIM29 (ENSTMTG00000006873)	ENSTMTG00000006856	OAF (ENSTMTG00000006844)	POU2F3 (ENSTMTG00000006736)	ENSTMTG00000006708	ENSTMTG00000006698	ARHGEF12 (ENSTMTG00000006567)	GRIK4 (ENSTMTG00000006477) #21	TBCEL (ENSTMTG00000006455) #22	TECTA (ENSTMTG00000006193) #23	SC5D (ENSTMTG00000006145) #24	SORL1 (ENSTMTG00000006009) #25	UBASH3B (ENSTMTG00000005941) #29	CRTAM (ENSTMTG00000005923) #30	BSX (ENSTMTG00000005902) #32	HSPA8 (ENSTMTG00000005836) #33	CLMP (ENSTMTG00000005784) #34	ENSTMTG00000005776 #36	ENSTMTG00000005716 #36	SCN3B (ENSTMTG00000005690) #37	ATP12A (ENSTMTG00000005572)	ENSTMTG00000005545	B3GAT1 (ENSTMTG00000005524)	ENSTMTG00000005502
Testudinidae	ANCESTRAL SPECIES	35	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000161289	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162.d	ENSGT00390000008162.c	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00550000075101 #24	ENSGT01030000234563.a.b #25	ENSGT00940000156097 #29	ENSGT00940000159804 #30	ENSGT00940000173536	ENSGT00940000161473 #32	ENSGT00950000183206.b #33	ENSGT00940000161031 #34	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00940000159259.b	ENSGT00950000185908	ENSGT00940000157165	ENSGT00950000182942.b
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES	1086															GRIK4 (ENSCABG00000016930) #21	ENSCABG00000016921 #22	ENSCABG00000016918 #22	TECTA (ENSCABG00000016909) #23
Abingdon island giant tortoise	MODERN SPECIES	1086														GRIK4 (ENSCABG00000016930) #21	ENSCABG00000016921 #22	ENSCABG00000016918 #22	TECTA (ENSCABG00000016909) #23
Goode s thornscrub tortoise	MODERN SPECIES	10	MCAM (ENSGEVG00005018717)	RNF26 (ENSGEVG00005018688)	C1QTNF5 (ENSGEVG00005018674)	MFRP (ENSGEVG00005018627)	USP2 (ENSGEVG00005018523)	THY1 (ENSGEVG00005018511)	ENSGEVG00005018501	NECTIN1 (ENSGEVG00005018483)	TRIM29 (ENSGEVG00005018385)	OAF (ENSGEVG00005018333)	POU2F3 (ENSGEVG00005018270)	ENSGEVG00005018237	ENSGEVG00005018216	ARHGEF12 (ENSGEVG00005018116)	GRIK4 (ENSGEVG00005017950) #21	TBCEL (ENSGEVG00005017912) #22	TECTA (ENSGEVG00005017677) #23	SC5D (ENSGEVG00005017633) #24	SORL1 (ENSGEVG00005017404) #25	UBASH3B (ENSGEVG00005017328) #29	CRTAM (ENSGEVG00005017253) #30	BSX (ENSGEVG00005017220) #32	HSPA8 (ENSGEVG00005017185) #33	CLMP (ENSGEVG00005017097) #34	ENSGEVG00005017066 #36	ENSGEVG00005016843 #36	SCN3B (ENSGEVG00005016798) #37	ATP12A (ENSGEVG00005016620)	ENSGEVG00005016581	ENSGEVG00005016554	B3GAT1 (ENSGEVG00005016530)
Chinese turtle	MODERN SPECIES	1891										OAF (ENSPSIG00000014368)	POU2F3 (ENSPSIG00000014141)	ENSPSIG00000014029	ENSPSIG00000014022	ARHGEF12 (ENSPSIG00000013776)	GRIK4 (ENSPSIG00000012538) #21	TBCEL (ENSPSIG00000012287) #22	TECTA (ENSPSIG00000011339) #23	ZW10 (ENSPSIG00000010216)	ENSPSIG00000010127	ENSPSIG00000001620	USP28 (ENSPSIG00000008806)	HTR3B (ENSPSIG00000008415)	HTR3A (ENSPSIG00000007231)	ZBTB16 (ENSPSIG00000006603)	ENSPSIG00000006538	ENSPSIG00000006531
Anura	ANCESTRAL SPECIES	150	ENSGT00940000159493	ENSGT00950000182849.A.f.a	ENSGT00940000167064	ENSGT00940000155772.b	ENSGT00940000155838	ENSGT00390000016584	ENSGT00940000161353	ENSGT00940000154525.b.b	ENSGT00940000155545.b	ENSGT00390000012352	ENSGT00940000156933	ENSGT00940000161416	ENSGT00940000157627	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00950000183155.a.a.a.b.h #23
Frog	MODERN SPECIES	7	ENSXETG00000047489	cbl (ENSXETG00000021588)	mcam (ENSXETG00000021591)	rnf26 (ENSXETG00000046315)	mfrp (ENSXETG00000037911)	usp2 (ENSXETG00000037568)	thy1 (ENSXETG00000021603)	nectin1 (ENSXETG00000009243)	ENSXETG00000040443	trim29 (ENSXETG00000009248)	POU2F3 (ENSXETG00000015251)	ENSXETG00000047315	arhgef12 (ENSXETG00000017018)	grik4 (ENSXETG00000017031) #21	tlcd5 (ENSXETG00000017046)	tbcel (ENSXETG00000024614) #22	tecta.1 (ENSXETG00000017048) #23	sorl1 (ENSXETG00000016937) #25	sc5d (ENSXETG00000040073) #24	bsx (ENSXETG00000016950) #32	ENSXETG00000046608	crtam (ENSXETG00000003896) #30	ENSXETG00000049396	ENSXETG00000045557	XB5896631 [provisional] (ENSXETG00000030114)	ENSXETG00000038464	ubash3b (ENSXETG00000003900) #29	tub (ENSXETG00000003913)	foxred1 (ENSXETG00000000843) #12	srpra (ENSXETG00000003920) #13	fam118b (ENSXETG00000003924) #14
Leishan spiny toad	MODERN SPECIES	2	ENSLLEG00000018572	ENSLLEG00000018537	ENSLLEG00000018163	ENSLLEG00000018116	ENSLLEG00000018098	ENSLLEG00000017394	ENSLLEG00000017342	ENSLLEG00000017313	ENSLLEG00000017226	ENSLLEG00000017193	ENSLLEG00000017136	ENSLLEG00000017073	ENSLLEG00000017048	ENSLLEG00000017014	ENSLLEG00000016957	TBCEL (ENSLLEG00000016855) #22	ENSLLEG00000016759	TECTA (ENSLLEG00000015971) #23	ENSLLEG00000015926	ENSLLEG00000015909	ARCN1 (ENSLLEG00000015604)	IFT46 (ENSLLEG00000015276)	ENSLLEG00000015141	ENSLLEG00000014915	ENSLLEG00000014868	ENSLLEG00000014851	HMBS (ENSLLEG00000014650)	DPAGT1 (ENSLLEG00000014528)	C2CD2L (ENSLLEG00000014333)	HINFP (ENSLLEG00000014041)	ENSLLEG00000013993
Coelacanth	MODERN SPECIES	243	PHLDB1 (ENSLACG00000016846)	C2CD2L (ENSLACG00000016702)	MCAM (ENSLACG00000016514)	RNF26 (ENSLACG00000016418)	C1QTNF5 (ENSLACG00000016316)	MFRP (ENSLACG00000016267)	USP2 (ENSLACG00000016056)	THY1 (ENSLACG00000022335)	ENSLACG00000014814	NECTIN1 (ENSLACG00000014271)	OAF (ENSLACG00000011164)	POU2F3 (ENSLACG00000010663)	TLCD5 (ENSLACG00000010577)	ARHGEF12 (ENSLACG00000009264)	GRIK4 (ENSLACG00000005660) #21	TBCEL (ENSLACG00000004247) #22	TECTA (ENSLACG00000001253) #23
Actinopterygii	ANCESTRAL SPECIES	108	ENSGT00390000009255	ENSGT00940000164937	ENSGT00940000156649 #36	ENSGT00390000018560.b #37	ENSGT00440000039164	ENSGT00440000039324	ENSGT01100000263551.a	ENSGT00500000044966	ENSGT00940000158657	ENSGT00940000155587.a.a	ENSGT00390000012008	ENSGT00940000157627	ENSGT00390000008162	ENSGT00940000157662	ENSGT00940000159111 #21	ENSGT00530000063405.b #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES	441														ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00530000063405.b.e #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b
Osteoglossocephalai	ANCESTRAL SPECIES	335									ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a
Clupeocephala	ANCESTRAL SPECIES	236	ENSGT00950000182913.A.a.b.a	ENSGT00390000001053	ENSGT00390000010003	ENSGT00940000155479	ENSGT00940000160928.n.a	ENSGT00950000182856.b.c	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00940000154904	ENSGT00940000155231.b	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n
Euteleosteomorpha	ANCESTRAL SPECIES	41	ENSGT00390000010003	ENSGT00940000155479	ENSGT00940000160928.n.a	ENSGT00950000182856.b.c	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT01000000214789	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a
Acanthomorphata	ANCESTRAL SPECIES	154	ENSGT00390000010003	ENSGT00940000155479	ENSGT00940000160928.n.a	ENSGT00950000182856.b.c	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083
Euacanthomorphacea	ANCESTRAL SPECIES	8	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Percomorphaceae	ANCESTRAL SPECIES	8	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Percomorphaceae_B	ANCESTRAL SPECIES	13	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Ovalentaria	ANCESTRAL SPECIES	8	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Atherinomorphae	ANCESTRAL SPECIES	15															ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Cyprinodontiformes	ANCESTRAL SPECIES	12															ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Aplocheiloidei	ANCESTRAL SPECIES	154																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Mangrove rivulus	MODERN SPECIES	221																tbcela (ENSKMAG00000014638) #22	usp2a (ENSKMAG00000014687)	ENSKMAG00000014764	ENSKMAG00000014773	gemin4 (ENSKMAG00000014793)	dhrs13b.2 (ENSKMAG00000014805)	ENSKMAG00000014826	smtnl (ENSKMAG00000014871)	ENSKMAG00000014917	tmem199 (ENSKMAG00000014930)	poldip2 (ENSKMAG00000014947)	LRRC75A (ENSKMAG00000014977)	crk (ENSKMAG00000015010)	ENSKMAG00000015030	myo1cb (ENSKMAG00000015092)	SLC43A2 (ENSKMAG00000015286)
Turquoise killifish	MODERN SPECIES	89																TBCEL (ENSNFUG00015015374) #22	USP2A (ENSNFUG00015015211)	ENSNFUG00015015178	GEMIN4 (ENSNFUG00015015173)	OLA.21582 (ENSNFUG00015015150)	smtnl (ENSNFUG00015015135)	ENSNFUG00015015129	TMEM199 (ENSNFUG00015015111)	POLDIP2 (ENSNFUG00015015023)
Cyprinodontoidei	ANCESTRAL SPECIES	9														ENSGT00940000162996.y.a.a.c.a.a	ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C.c	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Poeciliinae	ANCESTRAL SPECIES	14	ENSGT00610000086058.b.w.a	ENSGT00940000155499.c	ENSGT00940000162967	ENSGT00950000183120.i.a	ENSGT00940000155719.a.d.x	ENSGT00940000161369.B.b.a.a.c	ENSGT00940000161369.B.b.a.a.d.z	ENSGT00940000161369.B.b.a.b	ENSGT00940000163767.a.b.q	ENSGT00940000165062	ENSGT00940000163767.a.a	ENSGT00940000162761.b.a	ENSGT00940000160721	ENSGT00510000047299.d	ENSGT00940000162996.y.a.b.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C.c	ENSGT00940000156342.d	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.c.b	ENSGT00940000160165.a.b	ENSGT00950000183136.b.b.c	ENSGT00950000183086.a.a.b.h.a	ENSGT01030000234629.C.b	ENSGT00940000154369.g.b	ENSGT00390000016324	ENSGT00940000156948.j	ENSGT00940000156504.i.a
Poecilia	ANCESTRAL SPECIES	2	ENSGT00940000155719.a.d.w	ENSGT00940000155719.a.d.x	ENSGT00940000161369.B.b.a.a.c	ENSGT00940000161369.B.b.a.a.d.z	ENSGT00940000161369.B.b.a.b	ENSGT00940000163767.a.b.r	ENSGT00940000163767.a.b.q	ENSGT00940000165062	ENSGT00940000163767.a.a	ENSGT00940000162761.b.a	ENSGT00940000156077.h	ENSGT00940000160721	ENSGT00510000047299.d	ENSGT00940000162996.y.a.a.c.a.a	ENSGT00940000162996.y.a.b.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C.c	ENSGT00940000156342.d	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.c.b	ENSGT00940000160165.a.b	ENSGT00950000183136.b.b.c	ENSGT00950000183086.a.a.b.h.a	ENSGT01030000234629.C.b	ENSGT00940000154369.g.b	ENSGT00390000016324	ENSGT00940000156948.j	ENSGT00940000156504.i.a
NAME_6	ANCESTRAL SPECIES	60	ENSGT00940000161369.B.b.a.a.d.y.a	ENSGT00940000161369.B.b.a.a.d.z.b	ENSGT00940000161369.B.b.a.a.d.z.a	ENSGT00940000161369.B.b.a.b	ENSGT00940000163767.a.b.r	ENSGT00940000163767.a.b.q	ENSGT00940000165062	ENSGT00940000163767.a.a	ENSGT00940000162761.b.a	ENSGT00940000156077.h	ENSGT00940000160721	ENSGT00510000047299.d	ENSGT00940000162996.y.a.a.c.a.a	ENSGT00940000162996.y.a.b.b.b	ENSGT00940000162996.y.a.b.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C.c	ENSGT00940000156342.d	ENSGT00940000157522	ENSGT00940000162075	ENSGT00390000006095	ENSGT00900000141083.c.b	ENSGT00940000160165.a.b	ENSGT00950000183136.b.b.c	ENSGT00950000183086.a.a.b.h.a	ENSGT01030000234629.C.b	ENSGT00940000154369.g.b	ENSGT00390000016324
Amazon molly	MODERN SPECIES	325	FRY (ENSPFOG00000002134)	b3glcta (ENSPFOG00000004130)	ENSPFOG00000004331	hmgb1b (ENSPFOG00000004533)	ENSPFOG00000004538	ENSPFOG00000020303	ENSPFOG00000020304	ENSPFOG00000020305	ENSPFOG00000020306	or71as2 (ENSPFOG00000004620)	or71aq1 (ENSPFOG00000020307)	CHRNA10 (ENSPFOG00000004647)	PGAP2 (ENSPFOG00000004705)	ENSPFOG00000004739	ENSPFOG00000022258	tbcela (ENSPFOG00000005811) #22	usp2a (ENSPFOG00000005925)	ENSPFOG00000006124	PER2 (ENSPFOG00000006138)	PIK3CB (ENSPFOG00000006566)	foxl2b (ENSPFOG00000020308)	mrps22 (ENSPFOG00000007141)	COPB2 (ENSPFOG00000007284)	ENSPFOG00000007552	rbp2a (ENSPFOG00000007568)	lpar5b (ENSPFOG00000020309)	CLSTN2 (ENSPFOG00000007669)	spsb4a (ENSPFOG00000008391)	SLC25A36 (ENSPFOG00000008439)	pxylp1 (ENSPFOG00000008537)
Sailfin molly	MODERN SPECIES	836							or71al2 (ENSPLAG00000019211)	or71as2 (ENSPLAG00000019203)	or71aq1 (ENSPLAG00000000432)	ENSPLAG00000019182	ENSPLAG00000019172	PGAP2 (ENSPLAG00000000693)	ENSPLAG00000019135	ENSPLAG00000019048	ENSPLAG00000019006	tbcela (ENSPLAG00000018976) #22	usp2a (ENSPLAG00000018948)	ENSPLAG00000018911	PER2 (ENSPLAG00000018906)	PIK3CB (ENSPLAG00000018882)
Guppy	MODERN SPECIES	443	hmgb1b (ENSPREG00000012015)	ENSPREG00000011987	ENSPREG00000011962	ENSPREG00000011919	ENSPREG00000011899	ENSPREG00000011873	ENSPREG00000011858	ENSPREG00000011844	or71as1 (ENSPREG00000011839)	or71aq1 (ENSPREG00000011805)	ENSPREG00000011704	ENSPREG00000011682	PGAP2 (ENSPREG00000011666)	ENSPREG00000011466	ENSPREG00000011380	tbcela (ENSPREG00000011348) #22	usp2a (ENSPREG00000011319)	ENSPREG00000011295	PER2 (ENSPREG00000011271)	PIK3CB (ENSPREG00000011211)	mrps22 (ENSPREG00000011070)	COPB2 (ENSPREG00000010996)	ENSPREG00000010971	rbp2a (ENSPREG00000010960)	ENSPREG00000010948	lpar5b (ENSPREG00000010933)	CLSTN2 (ENSPREG00000010875)	spsb4a (ENSPREG00000010844)	SLC25A36 (ENSPREG00000010816)	pxylp1 (ENSPREG00000010798)	epha4a (ENSPREG00000010744)
Platyfish	MODERN SPECIES	9	FRY (ENSXMAG00000006863)	b3glcta (ENSXMAG00000006847)	ENSXMAG00000023054	hmgb1b (ENSXMAG00000006844)	ENSXMAG00000024573	ENSXMAG00000026918	or30bw1 (ENSXMAG00000020225)	or30bt5 (ENSXMAG00000020223)	or15.37 (ENSXMAG00000020222)	ENSXMAG00000024408	or71ar1 (ENSXMAG00000020221)	ENSXMAG00000006840	CHRNA10 (ENSXMAG00000006833)	PGAP2 (ENSXMAG00000006831)	ENSXMAG00000006737	tbcela (ENSXMAG00000006724) #22	usp2a (ENSXMAG00000006708)	ENSXMAG00000006705	PER2 (ENSXMAG00000006651)	PIK3CB (ENSXMAG00000006594)	foxl2b (ENSXMAG00000020219)	ENSXMAG00000029209	mrps22 (ENSXMAG00000006580)	COPB2 (ENSXMAG00000006552)	rbp2a (ENSXMAG00000006544)	lpar5b (ENSXMAG00000020218)	CLSTN2 (ENSXMAG00000008362)	spsb4a (ENSXMAG00000008361)	SLC25A36 (ENSXMAG00000008353)	pxylp1 (ENSXMAG00000008348)	epha4a (ENSXMAG00000008306)
NAME_4	ANCESTRAL SPECIES	102																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b
Mummichog	MODERN SPECIES	848																tbcela (ENSFHEG00000000671) #22	usp2a (ENSFHEG00000020853)	ENSFHEG00000020783	ENSFHEG00000020780	gemin4 (ENSFHEG00000020773)	dhrs13b.2 (ENSFHEG00000020758)	ENSFHEG00000020754
Sheepshead minnow	MODERN SPECIES	590																tbcela (ENSCVAG00000013501) #22	usp2a (ENSCVAG00000013530)	TLCD3A (ENSCVAG00000013545)	gemin4 (ENSCVAG00000013548)	dhrs13b.2 (ENSCVAG00000013554)	smtnl (ENSCVAG00000013637)	ENSCVAG00000013664	tmem199 (ENSCVAG00000013674)	poldip2 (ENSCVAG00000013728)	ENSCVAG00000013783	crk (ENSCVAG00000013792)	ENSCVAG00000013813	myo1cb (ENSCVAG00000013906)	SLC43A2 (ENSCVAG00000013992)	pitpnaa (ENSCVAG00000014004)	pitpnaa (ENSCVAG00000014006)
Oryzias	ANCESTRAL SPECIES	8	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A.d	ENSGT00940000165320	ENSGT00990000203615.b.a.b.d	ENSGT00940000154981.bb.a	ENSGT00940000160928.n.a	ENSGT00940000155479	ENSGT00390000010003	ENSGT00390000001053	ENSGT00950000182913.A.a.b.a	ENSGT00940000174828	ENSGT01030000234563.a.b #25	ENSGT00940000162996.y.b.a	ENSGT00940000162996.y.b.b	ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Oryzias_b	ANCESTRAL SPECIES	14	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A.d	ENSGT00940000165320	ENSGT00990000203615.b.a.b.d	ENSGT00940000154981.bb.a	ENSGT00940000160928.n.a	ENSGT00940000155479	ENSGT00390000010003	ENSGT00390000001053	ENSGT00950000182913.A.a.b.a	ENSGT00940000174828	ENSGT01030000234563.a.b #25	ENSGT00940000162996.y.b.a	ENSGT00940000162996.y.b.b	ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Indian medaka	MODERN SPECIES	12	P2RY2 (ENSOMEG00000022424)	FCHSD2 (ENSOMEG00000022375)	ENSOMEG00000022229	kcnj13 (ENSOMEG00000022218)	fat3a (ENSOMEG00000022153)	ENSOMEG00000021787	timm8b (ENSOMEG00000021760)	sdhdb (ENSOMEG00000021744)	ENSOMEG00000021730	bco2b (ENSOMEG00000021645)	ENSOMEG00000021463	SORL1 (ENSOMEG00000021421) #25	ENSOMEG00000021325	ENSOMEG00000021243	ENSOMEG00000021067	tbcela (ENSOMEG00000020908) #22	usp2a (ENSOMEG00000020848)	ENSOMEG00000020790	ENSOMEG00000020755	gemin4 (ENSOMEG00000020772)	dhrs13b.2 (ENSOMEG00000020741)	smtnl (ENSOMEG00000020723)	ENSOMEG00000020688	tmem199 (ENSOMEG00000020673)	poldip2 (ENSOMEG00000020642)	LRRC75A (ENSOMEG00000000545)	crk (ENSOMEG00000020592)	ENSOMEG00000020560	myo1cb (ENSOMEG00000020514)	SLC43A2 (ENSOMEG00000020437)	pitpnaa (ENSOMEG00000020246)
Javanese ricefish	MODERN SPECIES	4	P2RY2 (ENSOJAG00000016573)	FCHSD2 (ENSOJAG00000016597)	ENSOJAG00000017110	kcnj13 (ENSOJAG00000017154)	fat3a (ENSOJAG00000017205)	ENSOJAG00000018187	timm8b (ENSOJAG00000018211)	sdhdb (ENSOJAG00000018221)	ENSOJAG00000018227	bco2b (ENSOJAG00000018253)	ENSOJAG00000018692	ENSOJAG00000020000	ENSOJAG00000020179	ENSOJAG00000020580	ENSOJAG00000020632	TBCEL (ENSOJAG00000020634) #22	usp2a (ENSOJAG00000020653)	ENSOJAG00000020795	ENSOJAG00000020801	gemin4 (ENSOJAG00000020806)	dhrs13b.2 (ENSOJAG00000020817)	smtnl (ENSOJAG00000020822)	ENSOJAG00000020833	tmem199 (ENSOJAG00000020837)	poldip2 (ENSOJAG00000020859)	LRRC75A (ENSOJAG00000020974)	crk (ENSOJAG00000020977)	ENSOJAG00000020989	myo1cb (ENSOJAG00000021024)	SLC43A2 (ENSOJAG00000021065)	pitpnaa (ENSOJAG00000021152)
Oryzias_a	ANCESTRAL SPECIES	8	ENSGT01030000234621.C.a.a.b	ENSGT00510000046732.A.d	ENSGT00940000165320	ENSGT00990000203615.b.a.b.d	ENSGT00940000154981.bb.a	ENSGT00940000160928.n.a	ENSGT00940000155479	ENSGT00390000010003	ENSGT00940000171313	ENSGT00950000182913.A.a.b.a	ENSGT00940000174828	ENSGT01030000234563.a.b #25	ENSGT00940000162996.y.b.a.b.a	ENSGT00940000162996.y.b.b	ENSGT00940000162996.y.a.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Japanese Medaka HdrR	MODERN SPECIES	4	ENSORLG00000010152	timm8b (ENSORLG00000027643)	sdhdb (ENSORLG00000010127)	ENSORLG00000010112	bco2b (ENSORLG00000010103)	ENSORLG00000023084	SORL1 (ENSORLG00000010035) #25	ENSORLG00000025925	ENSORLG00000024011	ENSORLG00000010010	ENSORLG00000021864	ENSORLG00000018607	ENSORLG00000009995	ENSORLG00000009954	ENSORLG00000009939	tbcela (ENSORLG00000009931) #22	usp2a (ENSORLG00000009912)	ENSORLG00000009882	ENSORLG00000009873	gemin4 (ENSORLG00000009858)	dhrs13b.2 (ENSORLG00000009851)	smtnl (ENSORLG00000009847)	ENSORLG00000028278	tmem199 (ENSORLG00000028505)	poldip2 (ENSORLG00000009813)	LRRC75A (ENSORLG00000027178)	crk (ENSORLG00000009778)	ENSORLG00000009763	myo1cb (ENSORLG00000009740)	SLC43A2 (ENSORLG00000009715)	pitpnaa (ENSORLG00000009666)
Chinese medaka	MODERN SPECIES	1112													ENSOSIG00000009262	ENSOSIG00000009850	ENSOSIG00000009894	TBCEL (ENSOSIG00000009920) #22	usp2a (ENSOSIG00000009922)	ENSOSIG00000009970	TLCD3A (ENSOSIG00000009972)	gemin4 (ENSOSIG00000009974)	dhrs13b.2 (ENSOSIG00000009976)	poldip2 (ENSOSIG00000009978)	LRRC75A (ENSOSIG00000010368)	crk (ENSOSIG00000010371)	ENSOSIG00000010373	myo1cb (ENSOSIG00000010384)	SLC43A2 (ENSOSIG00000010854)	pitpnaa (ENSOSIG00000010870)
Ovalentaria_B	ANCESTRAL SPECIES	11	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b
Cichlidae	ANCESTRAL SPECIES	33															ENSGT00940000162996.`b.a.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	22															ENSGT00940000180778	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h.b	ENSGT00940000165285.h.a	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	25															ENSGT00940000180778	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h.b	ENSGT00940000165285.h.a	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	676															ENSNBRG00000015213	TBCEL (ENSNBRG00000015202) #22	usp2a (ENSNBRG00000015145)	TLCD3A (ENSNBRG00000015125)	gemin4 (ENSNBRG00000015072)	ENSNBRG00000015009	ENSNBRG00000014919
Lyretail cichlid	MODERN SPECIES	263																tbcela (ENSNBRG00000002696) #22
Haplochromini	ANCESTRAL SPECIES	35																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h.b	ENSGT00940000165285.h.a	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
Burton s mouthbrooder	MODERN SPECIES	694																tbcela (ENSHBUG00000008055) #22	usp2a (ENSHBUG00000008087)	TLCD3A (ENSHBUG00000008100)	gemin4 (ENSHBUG00000008115)	ENSHBUG00000008130	ENSHBUG00000008148	ENSHBUG00000008164	smtnl (ENSHBUG00000008238)	ENSHBUG00000008276	tmem199 (ENSHBUG00000008310)	poldip2 (ENSHBUG00000008329)	LRRC75A (ENSHBUG00000008371)	crk (ENSHBUG00000008389)	ENSHBUG00000008441	myo1cb (ENSHBUG00000008535)	SLC43A2 (ENSHBUG00000008643)
Haplochromini_A	ANCESTRAL SPECIES	40																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h.b	ENSGT00940000165285.h.a	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
P. nyererei	MODERN SPECIES	378																tbcela (ENSPNYG00000009393) #22	usp2a (ENSPNYG00000009435)	TLCD3A (ENSPNYG00000009492)	gemin4 (ENSPNYG00000009482)	ENSPNYG00000009509	ENSPNYG00000009553	ENSPNYG00000009581	smtnl (ENSPNYG00000009603)	tmem199 (ENSPNYG00000009647)	poldip2 (ENSPNYG00000009696)	LRRC75A (ENSPNYG00000009736)	crk (ENSPNYG00000009753)	ENSPNYG00000009776	myo1cb (ENSPNYG00000009814)	SLC43A2 (ENSPNYG00000009896)	pitpnaa (ENSPNYG00000009926)
Haplochromini_B	ANCESTRAL SPECIES	9																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.h.b	ENSGT00940000165285.h.a	ENSGT00940000165285.g	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
Zebra mbuna	DUPLICATION
Zebra mbuna	MODERN SPECIES	501																tbcela (ENSMZEG00005024877) #22
Zebra mbuna	MODERN SPECIES	1096	ENSMZEG00005004907	CLSTN2 (ENSMZEG00005004867)	ENSMZEG00005004855	spsb4a (ENSMZEG00005004837)	SLC25A36 (ENSMZEG00005004803)	pxylp1 (ENSMZEG00005004789)	epha4a (ENSMZEG00005004684)	pax3b (ENSMZEG00005004628)	ENSMZEG00005004622	SGPP2 (ENSMZEG00005004600)	ENSMZEG00005004594	ENSMZEG00005004588	farsb (ENSMZEG00005004544)	ENSMZEG00005004509	kcne4 (ENSMZEG00005004495)	TBCEL (ENSMZEG00005004478) #22	usp2a (ENSMZEG00005004453)	TLCD3A (ENSMZEG00005004444)	gemin4 (ENSMZEG00005004438)	ENSMZEG00005004351	ENSMZEG00005004308	smtnl (ENSMZEG00005004268)	ENSMZEG00005004247	tmem199 (ENSMZEG00005004229)	poldip2 (ENSMZEG00005004201)	LRRC75A (ENSMZEG00005004179)	crk (ENSMZEG00005004162)	ENSMZEG00005004138	myo1cb (ENSMZEG00005003996)	SLC43A2 (ENSMZEG00005003957)	pitpnaa (ENSMZEG00005003926)
Eastern happy	MODERN SPECIES	5	ENSACLG00000017974	ENSACLG00000017960	foxg1a (ENSACLG00000017908)	ENSACLG00000017296	ehd4 (ENSACLG00000017182)	g2e3 (ENSACLG00000017147)	scfd1 (ENSACLG00000017070)	coch (ENSACLG00000016965)	strn3 (ENSACLG00000016888)	ap4s1 (ENSACLG00000016857)	hectd1 (ENSACLG00000016633)	HEATR5A (ENSACLG00000016427)	hikeshi (ENSACLG00000016412)	ENSACLG00000016344	ENSACLG00000016329	tbcela (ENSACLG00000016175) #22	ENSACLG00000016164	usp2a (ENSACLG00000016110)	TLCD3A (ENSACLG00000016090)	gemin4 (ENSACLG00000016073)	ENSACLG00000016049	ENSACLG00000016018	ENSACLG00000015935	ENSACLG00000015922	smtnl (ENSACLG00000015818)	ENSACLG00000015809	tmem199 (ENSACLG00000015770)	poldip2 (ENSACLG00000015709)	LRRC75A (ENSACLG00000015660)	crk (ENSACLG00000015634)	ENSACLG00000015593
Nile tilapia	MODERN SPECIES	5	ENSONIG00000039498	zgc:113279 (ENSONIG00000014769)	ENSONIG00000014771	ENSONIG00000014773	PHLDB1 (ENSONIG00000014777)	arcn1b (ENSONIG00000014779)	hmbsa (ENSONIG00000014784)	ubash3bb (ENSONIG00000014789) #29	ENSONIG00000043089	ENSONIG00000000126	ENSONIG00000039010	sdhdb (ENSONIG00000035493)	ENSONIG00000028506	bco2b (ENSONIG00000010530)	ENSONIG00000037356	tbcela (ENSONIG00000016091) #22	usp2a (ENSONIG00000016095)	ENSONIG00000041814	gemin4 (ENSONIG00000016099)	ENSONIG00000028694	KSR1 (ENSONIG00000014814)	ENSONIG00000042646	ENSONIG00000027995	lgals9l3 (ENSONIG00000014805)	ENSONIG00000036275	MYO18A (ENSONIG00000014799)	ENSONIG00000040550	pipox (ENSONIG00000014793)	wsb1 (ENSONIG00000014818)	ENSONIG00000037543	ENSONIG00000036232
Midas cichlid	MODERN SPECIES	752															ENSACIG00000023574	tbcela (ENSACIG00000023546) #22	usp2a (ENSACIG00000023530)	gemin4 (ENSACIG00000023497)	ENSACIG00000023471	ENSACIG00000023460	smtnl (ENSACIG00000023451)	ENSACIG00000023444	tmem199 (ENSACIG00000023441)	poldip2 (ENSACIG00000023416)	LRRC75A (ENSACIG00000023405)	crk (ENSACIG00000023402)	ENSACIG00000023393	ENSACIG00000023388	myo1cb (ENSACIG00000023374)	SLC43A2 (ENSACIG00000023364)	pitpnaa (ENSACIG00000023361)
Pomacentridae	ANCESTRAL SPECIES	5	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000162996.cb	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.bb.b	ENSGT00940000162996.bb.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00390000012296	ENSGT00940000165285.j	ENSGT01010000222313.A.b.b.b.b	ENSGT00940000165285.i	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Pomacentridae_A	ANCESTRAL SPECIES	4	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000162996.cb	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.bb.b	ENSGT00940000162996.bb.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.j.b	ENSGT00940000165285.j.a	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Amphiprion	ANCESTRAL SPECIES	6	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.bb.b	ENSGT00940000162996.bb.a.b.a	ENSGT00940000162996.bb.a.a	ENSGT00940000162996.bb.a.b.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.j.b	ENSGT00940000165285.j.a	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Clown anemonefish	MODERN SPECIES	1985									gkup (ENSAOCG00000020118)	usf1l (ENSAOCG00000020132)	ENSAOCG00000020270	ENSAOCG00000020293	ENSAOCG00000020399	ENSAOCG00000020509	ENSAOCG00000020847	tbcela (ENSAOCG00000020937) #22
Orange clownfish	MODERN SPECIES	23	ENSAPEG00000004669	ENSAPEG00000004624	zgc:113279 (ENSAPEG00000004589)	ENSAPEG00000004580	ENSAPEG00000004553	PHLDB1 (ENSAPEG00000004390)	arcn1b (ENSAPEG00000004324)	hmbsa (ENSAPEG00000004263)	ubash3bb (ENSAPEG00000004184) #29	gkup (ENSAPEG00000004075)	usf1l (ENSAPEG00000004034)	ENSAPEG00000003951	ENSAPEG00000003814	ENSAPEG00000003680	ENSAPEG00000003589	tbcela (ENSAPEG00000003536) #22	ENSAPEG00000003500	ENSAPEG00000003487	gemin4 (ENSAPEG00000003477)	ENSAPEG00000003458	ENSAPEG00000003449	smtnl (ENSAPEG00000003419)	ENSAPEG00000003394	tmem199 (ENSAPEG00000003382)	poldip2 (ENSAPEG00000003344)	LRRC75A (ENSAPEG00000003307)	crk (ENSAPEG00000003246)	ENSAPEG00000003205	myo1cb (ENSAPEG00000003123)	SLC43A2 (ENSAPEG00000003008)	pitpnaa (ENSAPEG00000002966)
Spiny chromis	MODERN SPECIES	1482																tbcela (ENSAPOG00000003406) #22	usp2a (ENSAPOG00000003349)	ENSAPOG00000003315	gemin4 (ENSAPOG00000003304)	ENSAPOG00000003286	ENSAPOG00000003273	ENSAPOG00000003262	smtnl (ENSAPOG00000003242)	ENSAPOG00000003176	tmem199 (ENSAPOG00000003140)	poldip2 (ENSAPOG00000003125)
Bicolor damselfish	MODERN SPECIES	1519												ENSSPAG00000008635	ENSSPAG00000008555	ENSSPAG00000008410	ENSSPAG00000008330	tbcela (ENSSPAG00000008265) #22	usp2a (ENSSPAG00000008148)
Percomorphaceae_C	ANCESTRAL SPECIES	9	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Percomorphaceae_D	ANCESTRAL SPECIES	9	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b
Anabantaria	ANCESTRAL SPECIES	9	ENSGT00940000154477.jc.a	ENSGT00390000000002.a.b	ENSGT00940000155956.c	ENSGT00390000006189	ENSGT00940000156028.s	ENSGT00390000007237.r.c	ENSGT00940000163324.c.a.b	ENSGT00940000163324.c.b.l.b	ENSGT00940000163324.c.b.m	ENSGT00390000007237.r.d	ENSGT00940000165734	ENSGT00940000158967	ENSGT00510000048072	ENSGT00940000165592.a	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b	ENSGT00950000182894.C
Anabantoidei	ANCESTRAL SPECIES	14	ENSGT00940000154477.jc.a	ENSGT00390000000002.a.b	ENSGT00940000155956.c	ENSGT00390000006189	ENSGT00940000156028.s	ENSGT00390000007237.r.c	ENSGT00940000163324.c.a.b	ENSGT00940000163324.c.b.l.b	ENSGT00940000163324.c.b.m	ENSGT00390000007237.r.d	ENSGT00940000165734	ENSGT00940000158967	ENSGT00510000048072	ENSGT00940000165592.a	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b	ENSGT00950000182894.C
Siamese fighting fish	MODERN SPECIES	4	ENSBSLG00000009488	ENSBSLG00000009474	ENSBSLG00000009468	ENSBSLG00000009029	ENSBSLG00000008567	ENSBSLG00000008543	ENSBSLG00000008429	ENSBSLG00000008403	ENSBSLG00000025829	ENSBSLG00000025826	ENSBSLG00000025818	ENSBSLG00000025811	ENSBSLG00000025801	ENSBSLG00000025734	ENSBSLG00000025698	tbcela (ENSBSLG00000025661) #22	usp2a (ENSBSLG00000025615)	gemin4 (ENSBSLG00000025605)	dhrs13b.2 (ENSBSLG00000025602)	smtnl (ENSBSLG00000025598)	ENSBSLG00000025596	tmem199 (ENSBSLG00000025595)	poldip2 (ENSBSLG00000025465)	LRRC75A (ENSBSLG00000024996)	crk (ENSBSLG00000024994)	ENSBSLG00000024987	myo1cb (ENSBSLG00000024821)	SLC43A2 (ENSBSLG00000024669)	pitpnaa (ENSBSLG00000024467)	inpp5ka (ENSBSLG00000024376)	tekt1 (ENSBSLG00000024369)
Climbing perch	MODERN SPECIES	4	ENSATEG00000014500	ENSATEG00000014636	ENSATEG00000019407	ENSATEG00000016122	ENSATEG00000017823	ENSATEG00000018014	ENSATEG00000018959	ENSATEG00000015829	ENSATEG00000019151	ENSATEG00000019212	ENSATEG00000019310	ENSATEG00000025523	ENSATEG00000019476	ENSATEG00000019544	ENSATEG00000019574	ENSATEG00000019728 #22	usp2a (ENSATEG00000019761)	gemin4 (ENSATEG00000019818)	dhrs13b.2 (ENSATEG00000027173)	smtnl (ENSATEG00000019892)	ENSATEG00000019910	tmem199 (ENSATEG00000029032)	poldip2 (ENSATEG00000020018)	ENSATEG00000020048	crk (ENSATEG00000029738)	ENSATEG00000020090	myo1cb (ENSATEG00000020138)	SLC43A2 (ENSATEG00000020249)	pitpnaa (ENSATEG00000020294)	INPP5K (ENSATEG00000020329)	ENSATEG00000027291
Zig-zag eel	MODERN SPECIES	4	diabloa (ENSMAMG00000009562)	ENSMAMG00000009554	ENSMAMG00000009544	ENSMAMG00000009516	ENSMAMG00000009492	ENSMAMG00000027274	ENSMAMG00000009416	ENSMAMG00000009323	ENSMAMG00000023591	ENSMAMG00000009111	ENSMAMG00000005575	ENSMAMG00000005551	ENSMAMG00000005491	ENSMAMG00000005421	ENSMAMG00000005349	ENSMAMG00000005322 #22	usp2a (ENSMAMG00000005303)	gemin4 (ENSMAMG00000005293)	dhrs13b.2 (ENSMAMG00000005283)	smtnl (ENSMAMG00000005251)	ENSMAMG00000005216	tmem199 (ENSMAMG00000028045)	poldip2 (ENSMAMG00000005156)	ENSMAMG00000005116	crk (ENSMAMG00000005096)	ENSMAMG00000005055	myo1cb (ENSMAMG00000004998)	SLC43A2 (ENSMAMG00000004935)	pitpnaa (ENSMAMG00000004614)	INPP5K (ENSMAMG00000004570)	ENSMAMG00000004530
Carangaria	ANCESTRAL SPECIES	8	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b
Carangaria_A	ANCESTRAL SPECIES	37															ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000179754	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Seriola	ANCESTRAL SPECIES	224															ENSGT00940000162996.`c.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289
Yellowtail amberjack	MODERN SPECIES	2287	apoa1b (ENSSLDG00000008396)	ENSSLDG00000008382	bace1 (ENSSLDG00000008354)	pcsk7 (ENSSLDG00000008310)	tagln (ENSSLDG00000008288)	ENSSLDG00000008273	cbln20 (ENSSLDG00000008266)	cbln20 (ENSSLDG00000008252)	ENSSLDG00000008236	ENSSLDG00000008222	MFRP (ENSSLDG00000008203)	ENSSLDG00000008153	pnkp (ENSSLDG00000008122)	zgc:162193 (ENSSLDG00000008098)	ENSSLDG00000007661	tbcela (ENSSLDG00000007545) #22	usp2a (ENSSLDG00000007464)
Greater amberjack	MODERN SPECIES	287						PHLDB1 (ENSSDUG00000021901)	arcn1b (ENSSDUG00000021890)	hmbsa (ENSSDUG00000021881)	ENSSDUG00000021840	ENSSDUG00000021806	ENSSDUG00000021782	ENSSDUG00000021758	usf1l (ENSSDUG00000021728)	gkup (ENSSDUG00000021684)	ubash3bb (ENSSDUG00000021666) #29	tbcela (ENSSDUG00000021647) #22	usp2a (ENSSDUG00000021630)
Barramundi perch	MODERN SPECIES	124														ENSLCAG00010022607	ENSLCAG00010022623	tbcela (ENSLCAG00010000172) #22	usp2a (ENSLCAG00010000213)	TLCD3A (ENSLCAG00010000237)	gemin4 (ENSLCAG00010000256)	dhrs13b.2 (ENSLCAG00010000279)	smtnl (ENSLCAG00010000290)	ENSLCAG00010000297	tmem199 (ENSLCAG00010000303)	poldip2 (ENSLCAG00010000319)	LRRC75A (ENSLCAG00010000362)	crk (ENSLCAG00010000370)	ENSLCAG00010000400	myo1cb (ENSLCAG00010000823)	SLC43A2 (ENSLCAG00010001499)	pitpnaa (ENSLCAG00010001513)	inpp5ka (ENSLCAG00010001535)
Pleuronectoidei	ANCESTRAL SPECIES	51	ENSGT00950000182856.b.c	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b
Turbot	MODERN SPECIES	15	SNX19 (ENSSMAG00000016148)	ENSSMAG00000016185	ENSSMAG00000016200	ZBTB44 (ENSSMAG00000016209)	ENSSMAG00000016228	ENSSMAG00000029345	zgc:113279 (ENSSMAG00000016262)	ENSSMAG00000016352	ENSSMAG00000016366	ENSSMAG00000016502	arcn1b (ENSSMAG00000016704)	ubash3bb (ENSSMAG00000016815) #29	gkup (ENSSMAG00000016878)	ENSSMAG00000016991	sb:cb37 (ENSSMAG00000017107)	tbcela (ENSSMAG00000017202) #22	usp2a (ENSSMAG00000017276)	ENSSMAG00000017314	gemin4 (ENSSMAG00000017304)	dhrs13b.2 (ENSSMAG00000017332)	smtnl (ENSSMAG00000017360)	ENSSMAG00000017434	tmem199 (ENSSMAG00000017484)	poldip2 (ENSSMAG00000017505)	ENSSMAG00000017575	crk (ENSSMAG00000017607)	ENSSMAG00000017627	myo1cb (ENSSMAG00000017658)	SLC43A2 (ENSSMAG00000017885)	pitpnaa (ENSSMAG00000017938)	INPP5K (ENSSMAG00000018090)
Tongue sole	MODERN SPECIES	14	adamts15a (ENSCSEG00000004951)	ADAMTS8 (ENSCSEG00000004956)	zbtb44 (ENSCSEG00000004960)	ENSCSEG00000004964	ENSCSEG00000004966	zgc:113279 (ENSCSEG00000004972)	ENSCSEG00000004976	ENSCSEG00000004981	PHLDB1 (ENSCSEG00000004995)	arcn1b (ENSCSEG00000005006)	hmbsa (ENSCSEG00000005013)	ubash3bb (ENSCSEG00000005017) #29	gkup (ENSCSEG00000005027)	usf1l (ENSCSEG00000005037)	sb:cb37 (ENSCSEG00000005051)	tbcela (ENSCSEG00000005057) #22	usp2a (ENSCSEG00000005061)	ENSCSEG00000005069	gemin4 (ENSCSEG00000005072)	dhrs13b.2 (ENSCSEG00000005077)	smtnl (ENSCSEG00000005085)	ENSCSEG00000005096	tmem199 (ENSCSEG00000005098)	poldip2 (ENSCSEG00000005101)	LRRC75A (ENSCSEG00000005107)	ENSCSEG00000005114	tekt1 (ENSCSEG00000005126)	inpp5ka (ENSCSEG00000005136)	pitpnaa (ENSCSEG00000005156)	SLC43A2 (ENSCSEG00000005243)	myo1cb (ENSCSEG00000005253)
Eupercaria	ANCESTRAL SPECIES	7	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT00940000179754	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w
Tetraodontidae	ANCESTRAL SPECIES	10	ENSGT00950000182856.b.c	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT01050000245438.B	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000159610	ENSGT00940000153123.A	ENSGT00950000183078.b.a.b	ENSGT00390000010091.c	ENSGT00950000182929.A	ENSGT00940000163374	ENSGT00940000157786	ENSGT00940000157676	ENSGT00940000155162.o.b	ENSGT00940000163520.B.g	ENSGT00940000163520.A.b.a	ENSGT00940000162978.a.b	ENSGT00940000162775	ENSGT00940000154525.b.b
Tetraodon	MODERN SPECIES	8	SNX19 (ENSTNIG00000014374)	ENSTNIG00000014373	ADAMTS8 (ENSTNIG00000014372)	zbtb44 (ENSTNIG00000014371)	ENSTNIG00000014370	ENSTNIG00000014369	ENSTNIG00000014368	ENSTNIG00000014367	ENSTNIG00000014366	PHLDB1 (ENSTNIG00000014365)	arcn1b (ENSTNIG00000014364)	HMBS (ENSTNIG00000014363)	ubash3bb (ENSTNIG00000014362) #29	usf1l (ENSTNIG00000014361)	ENSTNIG00000014360	tbcela (ENSTNIG00000014359) #22	usp2a (ENSTNIG00000014358)	ech1 (ENSTNIG00000001500)	ech1 (ENSTNIG00000014357)	ENSTNIG00000014356	ENSTNIG00000014355	SIDT2 (ENSTNIG00000014354)	apoa1b (ENSTNIG00000014353)	ENSTNIG00000014352	bace1 (ENSTNIG00000014351)	pcsk7 (ENSTNIG00000014350)	tagln (ENSTNIG00000014349)	ENSTNIG00000000567	cbln20 (ENSTNIG00000001512)	ENSTNIG00000014348	nudt8 (ENSTNIG00000014347)
Fugu	MODERN SPECIES	2	ENSTRUG00000003150	ENSTRUG00000028564	ENSTRUG00000001802	rnpepl1 (ENSTRUG00000024939)	rpl35a (ENSTRUG00000003546)	ENSTRUG00000002657	clrn1 (ENSTRUG00000004876)	tsen34 (ENSTRUG00000032895)	zgc:92744 (ENSTRUG00000018022)	mmp23bb (ENSTRUG00000003905)	ENSTRUG00000026449	ABCF3 (ENSTRUG00000004104)	polr2d (ENSTRUG00000004740)	ubash3bb (ENSTRUG00000004824) #29	usf1l (ENSTRUG00000021581)	tbcela (ENSTRUG00000006818) #22	usp2a (ENSTRUG00000026132)	ech1 (ENSTRUG00000006958)	ENSTRUG00000031210	ENSTRUG00000025922	ENSTRUG00000024654	apoa-i (ENSTRUG00000030856)	ENSTRUG00000032408	bace1 (ENSTRUG00000007818)	pcsk7 (ENSTRUG00000008000)	tagln (ENSTRUG00000027090)	ENSTRUG00000032258	cbln20 (ENSTRUG00000020564)	ENSTRUG00000008011	nudt8 (ENSTRUG00000022308)	MFRP (ENSTRUG00000008293)
Eupecaria_A	ANCESTRAL SPECIES	9	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Ballan wrasse	MODERN SPECIES	379													ENSLBEG00000023781	ENSLBEG00000023697	ENSLBEG00000023619	tbcela (ENSLBEG00000023579) #22	usp2a (ENSLBEG00000023531)	ENSLBEG00000023510	gemin4 (ENSLBEG00000023482)	ENSLBEG00000023461	ENSLBEG00000023434	smtnl (ENSLBEG00000023399)	ENSLBEG00000023377	tmem199 (ENSLBEG00000023357)	poldip2 (ENSLBEG00000023335)	LRRC75A (ENSLBEG00000023302)	crk (ENSLBEG00000023255)	ENSLBEG00000023214	ENSLBEG00000023170
Eupecaria_B	ANCESTRAL SPECIES	9	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Perciformes	ANCESTRAL SPECIES	10	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000179754	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Cottioidei	ANCESTRAL SPECIES	4	ENSGT00940000155801	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00390000012058.c.a	ENSGT00950000182849.A.f.a.a	ENSGT00940000159493	ENSGT00940000158363	ENSGT00390000015987	ENSGT00550000074797.a.a	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00940000163530	ENSGT00520000058824	ENSGT00940000165970	ENSGT01060000248589.A.c	ENSGT00940000153881.b
Stickleback	MODERN SPECIES		abcg4b (ENSGACG00000005285)	SORL1 (ENSGACG00000005271) #25	bco2b (ENSGACG00000005259)	ENSGACG00000005257	ENSGACG00000005256	ENSGACG00000005228	PHLDB1 (ENSGACG00000005214)	arcn1b (ENSGACG00000005183)	hmbsa (ENSGACG00000005173)	ubash3bb (ENSGACG00000005161) #29	gkup (ENSGACG00000005148)	ENSGACG00000005145	usf1l (ENSGACG00000005115)	ENSGACG00000005083	ENSGACG00000005067	tbcela (ENSGACG00000005051) #22	ENSGACG00000005047	efhd1 (ENSGACG00000005038)	ENSGACG00000005026	NLRX1 (ENSGACG00000005004)	nlk2 (ENSGACG00000004996)	SMCO4 (ENSGACG00000004992)	NF1 (ENSGACG00000004964)	cox7a1 (ENSGACG00000004963)	supt5h (ENSGACG00000004934)	triap1 (ENSGACG00000004929)	ENSGACG00000004927	ENSGACG00000004922	ENSGACG00000004919	ENSGACG00000004916	SHKBP1 (ENSGACG00000004907)
Lumpfish	MODERN SPECIES	4	ENSCLMG00005001383	zgc:113279 (ENSCLMG00005001414)	ENSCLMG00005001442	ENSCLMG00005001498	ENSCLMG00005001562	PHLDB1 (ENSCLMG00005001597)	ENSCLMG00005001777	arcn1b (ENSCLMG00005001796)	hmbsa (ENSCLMG00005002221)	gkup (ENSCLMG00005002616)	ENSCLMG00005002638	usf1l (ENSCLMG00005002642)	ENSCLMG00005002651	ENSCLMG00005002662	ENSCLMG00005003196	TBCEL (ENSCLMG00005003439) #22	usp2a (ENSCLMG00005003447)	efhd1 (ENSCLMG00005003517)	ENSCLMG00005003520	NLRX1 (ENSCLMG00005003531)	nlk2 (ENSCLMG00005003545)	SMCO4 (ENSCLMG00005003547)	NF1 (ENSCLMG00005003576)	ENSCLMG00005005144	ENSCLMG00005005145	cox7a1 (ENSCLMG00005005146)	rnaset2l (ENSCLMG00005005147)	supt5h (ENSCLMG00005005159)	ENSCLMG00005005385	ENSCLMG00005005387	triap1 (ENSCLMG00005005388)
Perciformes_a	ANCESTRAL SPECIES	9	ENSGT00950000182856.b.c	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000179754	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Pike perch	MODERN SPECIES	60	ubash3bb (ENSSLUG00000006054) #29	gkup (ENSSLUG00000005979)	usf1l (ENSSLUG00000005890)	ENSSLUG00000005876	ENSSLUG00000005753	ENSSLUG00000005490	ENSSLUG00000003981	ENSSLUG00000003878	ENSSLUG00000003874	ENSSLUG00000003853	ENSSLUG00000003694	ENSSLUG00000003537	ENSSLUG00000003444	ENSSLUG00000003095	ENSSLUG00000002862	tbcela (ENSSLUG00000002841) #22	usp2a (ENSSLUG00000002780)	ENSSLUG00000002765	ENSSLUG00000002759	gemin4 (ENSSLUG00000002757)	dhrs13b.2 (ENSSLUG00000002756)	smtnl (ENSSLUG00000002749)	ENSSLUG00000002745	tmem199 (ENSSLUG00000002743)	poldip2 (ENSSLUG00000002733)	LRRC75A (ENSSLUG00000002726)	crk (ENSSLUG00000002719)	ENSSLUG00000002712	myo1cb (ENSSLUG00000002526)	SLC43A2 (ENSSLUG00000002381)	pitpnaa (ENSSLUG00000002261)
Channel bull blenny	MODERN SPECIES	4	zbtb44 (ENSCGOG00000007491)	ENSCGOG00000007503	ENSCGOG00000007504	zgc:113279 (ENSCGOG00000007506)	ENSCGOG00000007508	ENSCGOG00000007515	PHLDB1 (ENSCGOG00000007859)	arcn1b (ENSCGOG00000008306)	hmbsa (ENSCGOG00000008527)	ubash3bb (ENSCGOG00000008700) #29	gkup (ENSCGOG00000008713)	usf1l (ENSCGOG00000008774)	ENSCGOG00000008807	ENSCGOG00000008813	ENSCGOG00000008830	tbcela (ENSCGOG00000008854) #22	usp2a (ENSCGOG00000008983)	ENSCGOG00000009259	gemin4 (ENSCGOG00000009262)	dhrs13b.2 (ENSCGOG00000009265)	ENSCGOG00000009266	smtnl (ENSCGOG00000009268)	ENSCGOG00000009270	tmem199 (ENSCGOG00000009272)	poldip2 (ENSCGOG00000009283)	LRRC75A (ENSCGOG00000009493)	ENSCGOG00000009498	CLIP3 (ENSCGOG00000009519)	ENSCGOG00000009878	crk (ENSCGOG00000009881)	ENSCGOG00000009891
Eupecaria_C	ANCESTRAL SPECIES	7	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.fb	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	5	ENSGT00940000159642.f.a	ENSGT00940000153306.A.b	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000166660	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a	ENSGT00390000009083.n	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.fb	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a
European seabass	MODERN SPECIES	3	zgc:113279 (ENSDLAG00005017159)	ENSDLAG00005017189	ENSDLAG00005017199	ENSDLAG00005004221	arcn1b (ENSDLAG00005005294)	ENSDLAG00005005394	ENSDLAG00005005437 #29	ENSDLAG00005005549	ENSDLAG00005005633	ENSDLAG00005029328	ENSDLAG00005029585	ENSDLAG00005027832	ENSDLAG00005004695	ENSDLAG00005027680	ENSDLAG00005030285	ENSDLAG00005028264 #22	usp2a (ENSDLAG00005005772)	ENSDLAG00005003348	ENSDLAG00005028329	gemin4 (ENSDLAG00005006063)	dhrs13b.2 (ENSDLAG00005006073)	smtnl (ENSDLAG00005006083)	ENSDLAG00005006087	tmem199 (ENSDLAG00005028208)	poldip2 (ENSDLAG00005033557)	ENSDLAG00005034657	crk (ENSDLAG00005030120)	ENSDLAG00005028238	myo1cb (ENSDLAG00005006627)	SLC43A2 (ENSDLAG00005029833)	pitpnaa (ENSDLAG00005010747)
Large yellow croaker	MODERN SPECIES	479	ldb2a (ENSLCRG00005012896)	TAPT1 (ENSLCRG00005012909)	prom1a (ENSLCRG00005013631)	fgfbp2a (ENSLCRG00005015215)	FGFBP1 (ENSLCRG00005015216)	anxa5a (ENSLCRG00005015222)	ccna2 (ENSLCRG00005015239)	bbs7 (ENSLCRG00005015244)	tmem33 (ENSLCRG00005015248)	phox2bb (ENSLCRG00005015251)	LIMCH1 (ENSLCRG00005015259)	ENSLCRG00005015287	ENSLCRG00005015288	ENSLCRG00005015289	ENSLCRG00005000271	tbcela (ENSLCRG00005000526) #22	usp2a (ENSLCRG00005000541)	ENSLCRG00005001271	ENSLCRG00005001272	gemin4 (ENSLCRG00005001273)	dhrs13b.2 (ENSLCRG00005001277)	ENSLCRG00005001278	smtnl (ENSLCRG00005001282)	ENSLCRG00005001288	tmem199 (ENSLCRG00005001290)	poldip2 (ENSLCRG00005001295)	LRRC75A (ENSLCRG00005002322)	crk (ENSLCRG00005002323)	ENSLCRG00005002325	myo1cb (ENSLCRG00005002354)	SLC43A2 (ENSLCRG00005002782)
Gilthead seabream	MODERN SPECIES	11	ENSSAUG00010006907	ENSSAUG00010006903	ENSSAUG00010006892	zgc:113279 (ENSSAUG00010006890)	ENSSAUG00010006888	ENSSAUG00010006765	PHLDB1 (ENSSAUG00010006748)	arcn1b (ENSSAUG00010006711)	hmbsa (ENSSAUG00010005830)	ubash3bb (ENSSAUG00010005801) #29	gkup (ENSSAUG00010005791)	usf1l (ENSSAUG00010005728)	ENSSAUG00010005501	ENSSAUG00010005448	ENSSAUG00010005233	tbcela (ENSSAUG00010005221) #22	usp2a (ENSSAUG00010004896)	TLCD3A (ENSSAUG00010004875)	gemin4 (ENSSAUG00010004869)	dhrs13b.2 (ENSSAUG00010004865)	smtnl (ENSSAUG00010004860)	ENSSAUG00010004857	ENSSAUG00010004855	tmem199 (ENSSAUG00010004853)	poldip2 (ENSSAUG00010004229)	LRRC75A (ENSSAUG00010004170)	crk (ENSSAUG00010004157)	ENSSAUG00010004114	myo1cb (ENSSAUG00010023965)	SLC43A2 (ENSSAUG00010023944)	pitpnaa (ENSSAUG00010023808)
Tiger tail seahorse	MODERN SPECIES	517	ENSHCOG00000014198	zgc:113279 (ENSHCOG00000014213)	ENSHCOG00000000399	ENSHCOG00000014234	zbtb44 (ENSHCOG00000014256)	ADAMTS8 (ENSHCOG00000014274)	ENSHCOG00000014289	SNX19 (ENSHCOG00000014364)	ENSHCOG00000014424	timm8b (ENSHCOG00000014437)	sdhdb (ENSHCOG00000014441)	ENSHCOG00000014445	bco2b (ENSHCOG00000014811)	SORL1 (ENSHCOG00000014935) #25	sb:cb37 (ENSHCOG00000014963)	tbcela (ENSHCOG00000015004) #22	ENSHCOG00000015023	ENSHCOG00000015038	ENSHCOG00000015047	gemin4 (ENSHCOG00000015057)	dhrs13b.2 (ENSHCOG00000015063)	smtnl (ENSHCOG00000015074)	ENSHCOG00000015094	tmem199 (ENSHCOG00000015098)	poldip2 (ENSHCOG00000015114)	LRRC75A (ENSHCOG00000015130)	ENSHCOG00000015145	myo1cb (ENSHCOG00000015195)	SLC43A2 (ENSHCOG00000015235)	pitpnaa (ENSHCOG00000015264)	inpp5ka (ENSHCOG00000015362)
Pinecone sodierfish	MODERN SPECIES	4	ENSMMDG00005012176	zgc:113279 (ENSMMDG00005012178)	ENSMMDG00005012180	ENSMMDG00005012196	PHLDB1 (ENSMMDG00005012248)	arcn1b (ENSMMDG00005012691)	hmbsa (ENSMMDG00005012863)	ubash3bb (ENSMMDG00005013590) #29	gkup (ENSMMDG00005013599)	usf1l (ENSMMDG00005013601)	ENSMMDG00005013616	ENSMMDG00005013628	ENSMMDG00005013722	ENSMMDG00005016747	ENSMMDG00005016753	tbcela (ENSMMDG00005016755) #22	ENSMMDG00005016765	TLCD3A (ENSMMDG00005016856)	gemin4 (ENSMMDG00005016858)	dhrs13b.2 (ENSMMDG00005016860)	smtnl (ENSMMDG00005016864)	ENSMMDG00005016866	tmem199 (ENSMMDG00005016870)	poldip2 (ENSMMDG00005016877)	LRRC75A (ENSMMDG00005017093)	crk (ENSMMDG00005017139)	YWHAE (ENSMMDG00005017147)	myo1cb (ENSMMDG00005017179)	SLC43A2 (ENSMMDG00005017382)	pitpnaa (ENSMMDG00005017400)	inpp5ka (ENSMMDG00005018140)
Cod	MODERN SPECIES	7	ENSGMOG00000007754	ENSGMOG00000033044	ENSGMOG00000030738	ENSGMOG00000035158	prkag3b (ENSGMOG00000017006)	ENSGMOG00000010016	ENSGMOG00000026445	ENSGMOG00000009947	ENSGMOG00000006687	ENSGMOG00000006715	ENSGMOG00000004647	ENSGMOG00000009359	ENSGMOG00000016664	ENSGMOG00000029175	ENSGMOG00000023294	ENSGMOG00000016596 #22	ENSGMOG00000011686	ENSGMOG00000035064	ENSGMOG00000014946	ENSGMOG00000031600	ENSGMOG00000015747	ENSGMOG00000013769	ENSGMOG00000027474	ENSGMOG00000035637	ENSGMOG00000026998	sgcg (ENSGMOG00000014068)	RPS25 (ENSGMOG00000014055)	ENSGMOG00000014038	slc37a4a (ENSGMOG00000014018)	ENSGMOG00000013989	ENSGMOG00000013903
Protacanthopterygii	ANCESTRAL SPECIES	7	ENSGT00950000182843.a.a.a.b.a.b.d	ENSGT00450000040324.a.a.b	ENSGT00940000167295	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582	ENSGT00940000172731	ENSGT00940000165970	ENSGT00940000160348	ENSGT00950000182985.a.b.b	ENSGT01030000234613.b.b.g	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285.e	ENSGT00940000154495.a.a	ENSGT00920000149180.b	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT01100000263573.a.b	ENSGT00940000153576.c.b.w
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1532															ENSGT01030000234613.b.b.g.c	ENSGT00530000063405.b.e.e #22
Salmoninae_a	ANCESTRAL SPECIES	3	ENSGT00940000155478.ib.b.b	ENSGT00950000182843.a.a.a.b.a.b.d.b	ENSGT00450000040324.a.a.b.a	ENSGT00940000167295.k.b	ENSGT01040000240503.C.c	ENSGT00940000164418.a.a.c	ENSGT00940000154629.A.a.a	ENSGT00940000154550.b	ENSGT00640000091563.b.a	ENSGT00440000037640.k	ENSGT00990000205582.a	ENSGT00940000165970.c	ENSGT00940000160348.u	ENSGT00950000182985.a.b.b.a.b	ENSGT01030000234613.b.b.g.c	ENSGT00530000063405.b.e.e #22	ENSGT00940000161289.m.b	ENSGT01010000222313.A.b.b.b.b.c	ENSGT00390000012296.i	ENSGT00940000165285.e.a	ENSGT00940000154495.a.a.f	ENSGT00920000149180.b.d	ENSGT00390000014591.e	ENSGT00940000153571.a.g.a	ENSGT00940000161370.a.a	ENSGT00820000127055.a.a.e	ENSGT01090000260061.c.b.hd.a	ENSGT00940000157915.h	ENSGT00940000153576.c.b.w.d	ENSGT01100000263573.a.b.a	ENSGT00940000153576.c.b.w.c.a
Salmo	ANCESTRAL SPECIES	22	ENSGT00450000040324.a.a.b.a	ENSGT00940000167295.l	ENSGT00940000174501	ENSGT00940000167295.k.b	ENSGT01040000240503.C.c	ENSGT00940000164418.a.a.c	ENSGT00940000154629.A.a.a	ENSGT00940000154550.b	ENSGT00640000091563.b.a	ENSGT00440000037640.k	ENSGT00990000205582.a	ENSGT00940000165970.c	ENSGT00940000160348.u	ENSGT00950000182985.a.b.b.a.b	ENSGT01030000234613.b.b.g.c	ENSGT00530000063405.b.e.e #22	ENSGT00940000161289.m.b	ENSGT01010000222313.A.b.b.b.b.c	ENSGT00390000012296.i	ENSGT00940000165285.e.a	ENSGT00940000154495.a.a.f.a	ENSGT00920000149180.b.d	ENSGT00390000014591.e	ENSGT00940000153571.a.g.a	ENSGT00940000161370.a.a.a	ENSGT00820000127055.a.a.e	ENSGT01090000260061.c.b.hd.a	ENSGT00940000157915.h	ENSGT00940000153576.c.b.w.c.a	ENSGT00940000153576.c.b.w.d	ENSGT00940000157119.a.g
River trout	MODERN SPECIES	4	ENSSTUG00000004587	zgc:101731 (ENSSTUG00000004854)	zgc:113149 (ENSSTUG00000004875)	ENSSTUG00000004886	timm50 (ENSSTUG00000004898)	dlc (ENSSTUG00000004906)	chp2 (ENSSTUG00000004920)	cox7a1 (ENSSTUG00000004940)	rnaset2l (ENSSTUG00000004978)	supt5h (ENSSTUG00000005118)	ENSSTUG00000005859	ENSSTUG00000005883	spint2 (ENSSTUG00000005926)	ppp1r14ab (ENSSTUG00000005937)	ENSSTUG00000005953	tbcela (ENSSTUG00000005975) #22	usp2a (ENSSTUG00000006009)	TLCD3A (ENSSTUG00000006271)	gemin4 (ENSSTUG00000006284)	ENSSTUG00000006289	smtnl (ENSSTUG00000006311)	ENSSTUG00000006326	tmem199 (ENSSTUG00000006340)	poldip2 (ENSSTUG00000006377)	LRRC75A (ENSSTUG00000006968)	crk (ENSSTUG00000006975)	ENSSTUG00000007005	myo1cb (ENSSTUG00000007134)	SLC43A2 (ENSSTUG00000007513)	pitpnaa (ENSSTUG00000007700)	inpp5ka (ENSSTUG00000007762)
Atlantic salmon	MODERN SPECIES	28	dlc (ENSSSAG00000047939)	chp2 (ENSSSAG00000047947)	cox7a1 (ENSSSAG00000047999)	rnaset2l (ENSSSAG00000048067)	supt5h (ENSSSAG00000048229)	ENSSSAG00000091253	ENSSSAG00000112645	ENSSSAG00000055344	ENSSSAG00000085024	spint2 (ENSSSAG00000055352)	ppp1r14ab (ENSSSAG00000055362)	ENSSSAG00000110456	ENSSSAG00000082790	ENSSSAG00000055370	ENSSSAG00000108051	ENSSSAG00000110658 #22	ENSSSAG00000104904	ENSSSAG00000115449	gemin4 (ENSSSAG00000095835)	ENSSSAG00000055828	smtnl (ENSSSAG00000055835)	ENSSSAG00000097136	tmem199 (ENSSSAG00000055840)	poldip2 (ENSSSAG00000055854)	ENSSSAG00000119813	crk (ENSSSAG00000088560)	ENSSSAG00000057269	MYO1C (ENSSSAG00000057363)	ENSSSAG00000058574	skip (ENSSSAG00000058756)	ENSSSAG00000058821
Oncorhynchus	ANCESTRAL SPECIES	14	ENSGT00940000155478.ib.b.b	ENSGT00950000182843.a.a.a.b.a.b.c	ENSGT00450000040324.a.a.b.a	ENSGT00940000167295.k.b	ENSGT01040000240503.C.c	ENSGT00940000164418.a.a.c	ENSGT00940000154629.A.b.a.a	ENSGT00940000154550.b	ENSGT00640000091563.b.a	ENSGT00440000037640.k	ENSGT00990000205582.a	ENSGT00940000165970.c	ENSGT00940000160348.u	ENSGT00950000182985.a.b.b.a.b	ENSGT01030000234613.b.b.g.c	ENSGT00530000063405.b.e.e #22	ENSGT00940000161289.m.b	ENSGT01010000222313.A.b.b.b.b.c	ENSGT00390000012296.i	ENSGT00940000165285.e.a	ENSGT00940000154495.a.a.f	ENSGT00920000149180.b.d	ENSGT00390000014591.e	ENSGT00940000153571.a.g.a	ENSGT00940000161370.a.a	ENSGT00820000127055.a.a.e	ENSGT01090000260061.c.b.hd.a	ENSGT00940000157915.h	ENSGT01100000263573.a.b.a	ENSGT00940000153576.c.b.w.c.a	ENSGT00940000157119.a.g
Oncorhynchus_a	ANCESTRAL SPECIES	41	ENSGT00450000040324.a.a.b.a	ENSGT00940000167295.k.b	ENSGT01040000240503.C.c	ENSGT00940000164418.a.a.c	ENSGT00940000154629.A.a.a	ENSGT00940000175315.a	ENSGT00940000154629.A.b.a.a	ENSGT00940000154550.b	ENSGT00640000091563.b.a	ENSGT00440000037640.k	ENSGT00990000205582.a	ENSGT00940000165970.c	ENSGT00940000160348.u	ENSGT00950000182985.a.b.b.a.b	ENSGT01030000234613.b.b.g.c	ENSGT00530000063405.b.e.e #22	ENSGT00940000161289.m.a.a.b	ENSGT00940000161289.m.b	ENSGT01010000222313.A.b.b.b.b.c	ENSGT00390000012296.i	ENSGT00940000165285.e.a	ENSGT00940000154495.a.a.f	ENSGT00920000149180.b.d	ENSGT00390000014591.e	ENSGT00940000153571.a.g.a	ENSGT00940000161370.a.a	ENSGT00820000127055.a.a.e	ENSGT01090000260061.c.b.hd.a	ENSGT00940000157915.h	ENSGT01100000263573.a.b.a	ENSGT00940000153576.c.b.w.c.a
Coho salmon	MODERN SPECIES	9	CAPNS1 (ENSOKIG00005038549)	zgc:101731 (ENSOKIG00005038516)	zgc:113149 (ENSOKIG00005038498)	ENSOKIG00005038474	timm50 (ENSOKIG00005038435)	dlc (ENSOKIG00005038413)	chp2 (ENSOKIG00005038362)	ENSOKIG00005038328	rnaset2l (ENSOKIG00005038296)	supt5h (ENSOKIG00005034738)	ENSOKIG00005034567	ENSOKIG00005033713	spint2 (ENSOKIG00005033697)	ppp1r14ab (ENSOKIG00005033670)	ENSOKIG00005033641	tbcela (ENSOKIG00005033594) #22	ENSOKIG00005033584	usp2a (ENSOKIG00005033424)	TLCD3A (ENSOKIG00005033398)	GEMIN4 (ENSOKIG00005033390)	ENSOKIG00005033324	ENSOKIG00005033306	tmem199 (ENSOKIG00005033288)	poldip2 (ENSOKIG00005033129)	LRRC75A (ENSOKIG00005033112)	crk (ENSOKIG00005032875)	myo1cb (ENSOKIG00005032214)	ENSOKIG00005032118	SLC43A2 (ENSOKIG00005031873)	pitpnaa (ENSOKIG00005031777)	INPP5K (ENSOKIG00005031594)
Chinook salmon	MODERN SPECIES	5	ENSOTSG00005018781	zgc:101731 (ENSOTSG00005018784)	zgc:113149 (ENSOTSG00005018792)	zgc:171927 (ENSOTSG00005018800)	timm50 (ENSOTSG00005018808)	dlc (ENSOTSG00005018817)	chp2 (ENSOTSG00005018822)	cox7a1 (ENSOTSG00005018823)	rnaset2l (ENSOTSG00005018825)	supt5h (ENSOTSG00005018851)	ENSOTSG00005019540	ENSOTSG00005019542	spint2 (ENSOTSG00005019544)	ppp1r14ab (ENSOTSG00005019545)	ENSOTSG00005019546	tbcela (ENSOTSG00005019547) #22	usp2a (ENSOTSG00005019549)	TLCD3A (ENSOTSG00005019551)	gemin4 (ENSOTSG00005019552)	ENSOTSG00005019554	smtnl (ENSOTSG00005019556)	ENSOTSG00005019558	tmem199 (ENSOTSG00005019559)	poldip2 (ENSOTSG00005019561)	LRRC75A (ENSOTSG00005019797)	crk (ENSOTSG00005019798)	ENSOTSG00005019801	myo1cb (ENSOTSG00005019831)	ENSOTSG00005020335	SLC43A2 (ENSOTSG00005020339)	pitpnaa (ENSOTSG00005020436)
Rainbow trout	MODERN SPECIES	16	ENSOMYG00000025577	zgc:101731 (ENSOMYG00000025656)	zgc:113149 (ENSOMYG00000025675)	timm50 (ENSOMYG00000025705)	dlc (ENSOMYG00000025761)	chp2 (ENSOMYG00000025785)	ENSOMYG00000025842	rnaset2l (ENSOMYG00000025897)	supt5h (ENSOMYG00000026492)	IL-15Lb (ENSOMYG00000030203)	ENSOMYG00000030234	spint2 (ENSOMYG00000030275)	ppp1r14ab (ENSOMYG00000066277)	ENSOMYG00000030325	ENSOMYG00000070639	ENSOMYG00000030343 #22	ENSOMYG00000030440	ENSOMYG00000030535	gemin4 (ENSOMYG00000030544)	ENSOMYG00000030560	smtnl (ENSOMYG00000030574)	ENSOMYG00000061683	ENSOMYG00000030590	ENSOMYG00000030598	poldip2 (ENSOMYG00000030640)	ENSOMYG00000030675	ENSOMYG00000071523	crk (ENSOMYG00000030681)	ENSOMYG00000030712	myo1cb (ENSOMYG00000065535)	ENSOMYG00000028329
Huchen	MODERN SPECIES	1691															ENSHHUG00000052263	tbcela (ENSHHUG00000052266) #22	usp2a (ENSHHUG00000052270)
Salmoninae	ANCESTRAL SPECIES	109	ENSGT00950000182843.a.a.a.b.a.b.d.a	ENSGT00450000040324.a.a.b.b	ENSGT00940000167295.k.a	ENSGT01040000240503.C.d	ENSGT00940000164418.a.a.d	ENSGT00940000154629.A.b	ENSGT00940000175315	ENSGT00940000178011	ENSGT00440000037640.l	ENSGT00990000205582.b	ENSGT00940000172731.a	ENSGT00940000165970.d	ENSGT00940000160348.v	ENSGT00950000182985.a.b.b.a.a	ENSGT01030000234613.b.b.g.d	ENSGT00530000063405.b.e.f #22	ENSGT00940000161289.m.a	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b.d	ENSGT00390000012296.j	ENSGT00940000165285.e.b	ENSGT00940000154495.a.a.e	ENSGT00920000149180.b.c	ENSGT00390000014591.f	ENSGT00940000153571.a.g.b	ENSGT00940000161370.a.b	ENSGT00820000127055.a.a.f	ENSGT01090000260061.c.b.hd.b	ENSGT00940000157915.g	ENSGT01100000263573.a.b.b	ENSGT00940000153576.c.b.w.c.b
Huchen	MODERN SPECIES	1454									supt5h (ENSHHUG00000043235)	ENSHHUG00000043294	ENSHHUG00000043298	ENSHHUG00000043303	spint2 (ENSHHUG00000043304)	ppp1r14ab (ENSHHUG00000043314)	ENSHHUG00000043324	tbcela (ENSHHUG00000043336) #22	usp2a (ENSHHUG00000043350)	ENSHHUG00000043375	gemin4 (ENSHHUG00000043382)	ENSHHUG00000043392
Salmoninae_a	ANCESTRAL SPECIES	19	ENSGT00950000182843.a.a.a.b.a.b.d.a	ENSGT00450000040324.a.a.b.b	ENSGT00940000167295.k.a	ENSGT01040000240503.C.d	ENSGT00940000164418.a.a.d	ENSGT00940000154629.A.b	ENSGT00940000175315	ENSGT00640000091563.b.b	ENSGT00440000037640.l	ENSGT00990000205582.b	ENSGT00940000172731.a	ENSGT00940000165970.d	ENSGT00940000160348.v	ENSGT00950000182985.a.b.b.a.a	ENSGT01030000234613.b.b.g.d	ENSGT00530000063405.b.e.f #22	ENSGT00940000161289.m.a	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b.d	ENSGT00390000012296.j	ENSGT00940000165285.e.b	ENSGT00940000154495.a.a.e	ENSGT00920000149180.b.c	ENSGT00390000014591.f	ENSGT00940000153571.a.g.b	ENSGT00940000161370.a.b	ENSGT00820000127055.a.a.f	ENSGT01090000260061.c.b.hd.b	ENSGT00940000157915.g	ENSGT01100000263573.a.b.b	ENSGT00940000153576.c.b.w.c.b
Salmo	ANCESTRAL SPECIES	7	ENSGT00940000155478.ib.b.a.a	ENSGT00940000155478.ib.b.a.b	ENSGT00950000182843.a.a.a.b.a.b.d.a	ENSGT00450000040324.a.a.b.b	ENSGT00940000167295.k.a	ENSGT01040000240503.C.d	ENSGT00940000164418.a.a.d	ENSGT00940000178011	ENSGT00440000037640.l	ENSGT00990000205582.b	ENSGT00940000172731.a	ENSGT00940000165970.d	ENSGT00940000160348.v	ENSGT00950000182985.a.b.b.a.a	ENSGT01030000234613.b.b.g.d	ENSGT00530000063405.b.e.f #22	ENSGT00940000161289.m.a	ENSGT00940000162556.C	ENSGT01010000222313.A.b.b.b.b.d	ENSGT00390000012296.j	ENSGT00940000165285.e.b	ENSGT00940000154495.a.a.f.b	ENSGT00920000149180.b.c	ENSGT00390000014591.f	ENSGT00940000153571.a.g.b	ENSGT00940000161370.a.a.b	ENSGT00820000127055.a.a.f	ENSGT01090000260061.c.b.hd.b	ENSGT00940000157915.g	ENSGT01100000263573.a.b.b	ENSGT00940000153576.c.b.w.c.b
Atlantic salmon	MODERN SPECIES	12	ENSSSAG00000098204	CPNS1 (ENSSSAG00000069776)	ENSSSAG00000069865	ENSSSAG00000069882	ENSSSAG00000069891	timm50 (ENSSSAG00000069913)	dlc (ENSSSAG00000069926)	chp2 (ENSSSAG00000069932)	cox7a1 (ENSSSAG00000120787)	supt5h (ENSSSAG00000070007)	ENSSSAG00000071437	ENSSSAG00000071441	spit2 (ENSSSAG00000071453)	ppp1r14ab (ENSSSAG00000092781)	ENSSSAG00000071473	ENSSSAG00000055386 #22	ENSSSAG00000106670	gemin4 (ENSSSAG00000071535)	ENSSSAG00000109888	ENSSSAG00000071528	smtnl (ENSSSAG00000108899)	tmem199 (ENSSSAG00000071546)	poldip2 (ENSSSAG00000071556)	ENSSSAG00000084406	crk (ENSSSAG00000071605)	ENSSSAG00000071608	myo1cb (ENSSSAG00000071623)	ENSSSAG00000071936	SLC43A2 (ENSSSAG00000071949)	pitpnaa (ENSSSAG00000058717)	INPP5K (ENSSSAG00000071997)
River trout	MODERN SPECIES	18	CAPNS1 (ENSSTUG00000013470)	zgc:101731 (ENSSTUG00000013626)	zgc:113149 (ENSSTUG00000013639)	zgc:171927 (ENSSTUG00000013648)	dlc (ENSSTUG00000013656)	ENSSTUG00000013696	chp2 (ENSSTUG00000013711)	ENSSTUG00000013727	supt5h (ENSSTUG00000013781)	ENSSTUG00000014958	ENSSTUG00000014970	ENSSTUG00000014980	spint2 (ENSSTUG00000015000)	ppp1r14ab (ENSSTUG00000015033)	ENSSTUG00000015048	tbcela (ENSSTUG00000015063) #22	usp2a (ENSSTUG00000015094)	ENSSTUG00000015395	TLCD3A (ENSSTUG00000015401)	gemin4 (ENSSTUG00000015421)	ENSSTUG00000015436	smtnl (ENSSTUG00000015459)	ENSSTUG00000015503	tmem199 (ENSSTUG00000015522)	poldip2 (ENSSTUG00000015532)	LRRC75A (ENSSTUG00000015889)	crk (ENSSTUG00000015897)	YWHAE (ENSSTUG00000015917)	myo1cb (ENSSTUG00000016150)	ENSSTUG00000016689	SLC43A2 (ENSSTUG00000016696)
Oncorhynchus	ANCESTRAL SPECIES	24	ENSGT00940000155478.ib.b.a.b	ENSGT00950000182843.a.a.a.b.a.b.d.a	ENSGT00450000040324.a.a.b.b	ENSGT00940000167295.k.a	ENSGT01040000240503.C.d	ENSGT00940000164418.a.a.d	ENSGT00940000154629.A.b.b	ENSGT00940000175315.b	ENSGT00640000091563.b.b	ENSGT00440000037640.l	ENSGT00990000205582.b	ENSGT00940000165970.d	ENSGT00940000160348.v	ENSGT00950000182985.a.b.b.a.a	ENSGT01030000234613.b.b.g.d	ENSGT00530000063405.b.e.f #22	ENSGT00940000161289.m.a.a.a	ENSGT00940000162556.C	ENSGT00940000161289.m.a.b	ENSGT01010000222313.A.b.b.b.b.d	ENSGT00390000012296.j	ENSGT00940000165285.e.b	ENSGT00940000154495.a.a.e	ENSGT00920000149180.b.c	ENSGT00390000014591.f	ENSGT00940000153571.a.g.b	ENSGT00940000161370.a.b	ENSGT00820000127055.a.a.f	ENSGT01090000260061.c.b.hd.b	ENSGT00940000157915.g	ENSGT01100000263573.a.b.b
Rainbow trout	MODERN SPECIES	19	ENSOMYG00000044233	ENSOMYG00000044236	timm50 (ENSOMYG00000044250)	dlc (ENSOMYG00000044260)	chp2 (ENSOMYG00000044273)	rnaset2l (ENSOMYG00000044286)	ENSOMYG00000044280	supt5h (ENSOMYG00000044373)	ENSOMYG00000043940	ENSOMYG00000044902	ENSOMYG00000069877	ENSOMYG00000044908	spint2 (ENSOMYG00000044917)	ppp1r14ab (ENSOMYG00000044925)	ENSOMYG00000044932	ENSOMYG00000044938 #22	ENSOMYG00000044946	ENSOMYG00000044962	ENSOMYG00000052147	ENSOMYG00000044967	gemin4 (ENSOMYG00000044972)	ENSOMYG00000044978	smtnl (ENSOMYG00000044992)	ENSOMYG00000067009	cq032 (ENSOMYG00000044999)	poldip2 (ENSOMYG00000045008)	ENSOMYG00000069003	crk (ENSOMYG00000045026)	ENSOMYG00000045030	myo1cb (ENSOMYG00000045158)	ENSOMYG00000045478
Oncorhynchus_a	ANCESTRAL SPECIES	25	ENSGT00940000155478.ib.b.a.a	ENSGT00950000182843.a.a.a.b.a.b.d.a	ENSGT00450000040324.a.a.b.b	ENSGT00940000167295.k.a	ENSGT01040000240503.C.d	ENSGT00940000164418.a.a.d	ENSGT00940000154629.A.b.b	ENSGT00940000175315.b	ENSGT00640000091563.b.b	ENSGT00440000037640.l	ENSGT00990000205582.b	ENSGT00940000165970.d	ENSGT00940000160348.v	ENSGT00950000182985.a.b.b.a.a	ENSGT01030000234613.b.b.g.d	ENSGT00530000063405.b.e.f #22	ENSGT00940000161289.m.a.a.a	ENSGT00940000162556.C	ENSGT00940000161289.m.a.b	ENSGT01010000222313.A.b.b.b.b.d	ENSGT00390000012296.j	ENSGT00940000165285.e.b	ENSGT00940000154495.a.a.e	ENSGT00920000149180.b.c	ENSGT00390000014591.f	ENSGT00940000153571.a.g.b	ENSGT00940000161370.a.b	ENSGT00820000127055.a.a.f	ENSGT01090000260061.c.b.hd.b	ENSGT00940000157915.g	ENSGT01100000263573.a.b.b
Coho salmon	MODERN SPECIES	6	ENSOKIG00005031584	zgc:101731 (ENSOKIG00005031786)	ENSOKIG00005031797	zgc:171927 (ENSOKIG00005031802)	timm50 (ENSOKIG00005031854)	dlc (ENSOKIG00005031959)	chp2 (ENSOKIG00005031998)	ENSOKIG00005032042	rnaset2l (ENSOKIG00005032075)	supt5h (ENSOKIG00005032205)	ENSOKIG00005034836	ENSOKIG00005034879	spint2 (ENSOKIG00005034979)	ppp1r14ab (ENSOKIG00005035025)	ENSOKIG00005035052	TBCEL (ENSOKIG00005035075) #22	USP2 (ENSOKIG00005035107)	ENSOKIG00005035332	gemin4 (ENSOKIG00005035359)	ENSOKIG00005035374	smtnl (ENSOKIG00005035402)	ENSOKIG00005035469	tmem199 (ENSOKIG00005035489)	ENSOKIG00005035502	poldip2 (ENSOKIG00005035514)	LRRC75A (ENSOKIG00005035655)	crk (ENSOKIG00005035668)	ENSOKIG00005035698	myo1cb (ENSOKIG00005035906)	ENSOKIG00005036246	SLC43A2 (ENSOKIG00005036274)
Chinook salmon	MODERN SPECIES	4	ENSOTSG00005016200	zgc:101731 (ENSOTSG00005016221)	zgc:113149 (ENSOTSG00005016223)	zgc:171927 (ENSOTSG00005016224)	timm50 (ENSOTSG00005016227)	dlc (ENSOTSG00005016240)	chp2 (ENSOTSG00005016241)	ENSOTSG00005016242	rnaset2l (ENSOTSG00005016244)	supt5h (ENSOTSG00005016260)	ENSOTSG00005019306	ENSOTSG00005019307	spint2 (ENSOTSG00005019309)	ENSOTSG00005019310	ENSOTSG00005019311	tbcela (ENSOTSG00005019312) #22	usp2a (ENSOTSG00005019313)	ENSOTSG00005019410	ENSOTSG00005019411	gemin4 (ENSOTSG00005019412)	ENSOTSG00005019414	smtnl (ENSOTSG00005019417)	ENSOTSG00005019418	tmem199 (ENSOTSG00005019419)	poldip2 (ENSOTSG00005019420)	LRRC75A (ENSOTSG00005019422)	crk (ENSOTSG00005019423)	YWHAE (ENSOTSG00005019424)	myo1cb (ENSOTSG00005019428)	ENSOTSG00005020155	SLC43A2 (ENSOTSG00005014890)
Northern pike	MODERN SPECIES		zgc:101731 (ENSELUG00000011700)	zgc:113149 (ENSELUG00000011689)	zgc:171927 (ENSELUG00000011680)	timm50 (ENSELUG00000011654)	dlc (ENSELUG00000011615)	chp1 (ENSELUG00000011565)	ENSELUG00000001234	rnaset2l (ENSELUG00000011452)	supt5h (ENSELUG00000011402)	ENSELUG00000011336	ENSELUG00000011311	ENSELUG00000011297	ENSELUG00000011269	ppp1r14ab (ENSELUG00000011235)	EXOC3L2 (ENSELUG00000011211)	tbcela (ENSELUG00000011179) #22	usp2a (ENSELUG00000011139)	fam57a (ENSELUG00000011065)	gemin4 (ENSELUG00000011032)	ENSELUG00000011021	smtnl (ENSELUG00000011007)	ENSELUG00000010970	tmem199 (ENSELUG00000010950)	poldip2 (ENSELUG00000010921)	LRRC75A (ENSELUG00000010891)	crk (ENSELUG00000010869)	YWHAE (ENSELUG00000010843)	myo1cb (ENSELUG00000010784)	ENSELUG00000010727	SLC43A2 (ENSELUG00000010717)	pitpnaa (ENSELUG00000010590)
Otomorpha	ANCESTRAL SPECIES	318	ENSGT01030000234563.a.b #25	ENSGT00990000204384	ENSGT00950000182913.A.a.b.a	ENSGT00390000010003.h	ENSGT00940000160928.n.a	ENSGT00950000182856.b.c	ENSGT00940000155801.c	ENSGT00940000159642.f.a	ENSGT00940000167856.b	ENSGT00940000177557	ENSGT00940000168466	ENSGT00940000153695.A	ENSGT00530000063801.b.g	ENSGT00940000154904	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00940000155231.a.a	ENSGT00390000017207.i.a
Otophysi	ANCESTRAL SPECIES	23	ENSGT00940000162060.d	ENSGT00940000164257	ENSGT00410000028254	ENSGT00940000166045	ENSGT00390000001844.a.b.a.b	ENSGT00940000156445.o.a	ENSGT00950000183066.a.a.b.h	ENSGT00940000167059	ENSGT00940000160928.n.a	ENSGT00390000010003.h	ENSGT00950000182913.A.a.b.a	ENSGT00990000204384	ENSGT01030000234563.a.b #25	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT00940000157588	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582
Characiphysae	ANCESTRAL SPECIES	22														ENSGT00940000154904	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000157588	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582	ENSGT00940000165970
Characiphysae_b	ANCESTRAL SPECIES	14																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000157588	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582	ENSGT00940000165970
Characoidei	ANCESTRAL SPECIES	12																ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000157588	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582	ENSGT00940000165970
Red-bellied piranha	MODERN SPECIES	35																tbcela (ENSPNAG00000001723) #22	usp2a (ENSPNAG00000011362)	ULK2 (ENSPNAG00000007165)	aldh3a2a (ENSPNAG00000011200)	ENSPNAG00000001589	tpst1 (ENSPNAG00000011170)	SGSM2 (ENSPNAG00000007104)	tnfaip1 (ENSPNAG00000011036)	timm50 (ENSPNAG00000001489)	dlc (ENSPNAG00000011020)	chp2 (ENSPNAG00000010994)	cox7a1 (ENSPNAG00000010970)	rnaset2l (ENSPNAG00000010950)	supt5h (ENSPNAG00000010925)	ENSPNAG00000010863	ENSPNAG00000010847
Mexicana tetra	MODERN SPECIES		ENSAMXG00000009112	ENSAMXG00000040678	supt5h (ENSAMXG00000009128)	rnaset2l (ENSAMXG00000042594)	cox7a1 (ENSAMXG00000009169)	chp2 (ENSAMXG00000009173)	dlc (ENSAMXG00000009183)	timm50 (ENSAMXG00000035179)	tnfaip1 (ENSAMXG00000030459)	SGSM2 (ENSAMXG00000009205)	tpst1 (ENSAMXG00000009211)	ENSAMXG00000009212	aldh3a2a (ENSAMXG00000009213)	ULK2 (ENSAMXG00000009215)	ENSAMXG00000009216	tbcela (ENSAMXG00000020422) #22	usp2a (ENSAMXG00000043395)	ENSAMXG00000031127	ENSAMXG00000010569	ENSAMXG00000041862	ENSAMXG00000010565	ENSAMXG00000031116	ENSAMXG00000010515	usf1 (ENSAMXG00000031994)	abcg4b (ENSAMXG00000010477)	msi2b (ENSAMXG00000010474)	akap1b (ENSAMXG00000024876)	ENSAMXG00000032503	ENSAMXG00000030486	OMG (ENSAMXG00000034967)	ENSAMXG00000029686
Electric eel	MODERN SPECIES	25																tbcela (ENSEEEG00000024540) #22	usp2a (ENSEEEG00000024541)	ULK2 (ENSEEEG00000024542)	aldh3a2a (ENSEEEG00000024543)	ENSEEEG00000024545	tpst1 (ENSEEEG00000024546)	SGSM2 (ENSEEEG00000024547)	tnfaip1 (ENSEEEG00000024548)	timm50 (ENSEEEG00000024549)	dlc (ENSEEEG00000024550)	chp2 (ENSEEEG00000024551)	cox7a1 (ENSEEEG00000024552)	rnaset2l (ENSEEEG00000024553)	supt5h (ENSEEEG00000024554)	ENSEEEG00000024555	ENSEEEG00000024556
Channel catfish	MODERN SPECIES	8	mcamb (ENSIPUG00000011368)	RNF26 (ENSIPUG00000011343)	C1qtnf5 (ENSIPUG00000011333)	KMT2A (ENSIPUG00000011268)	UBE4A (ENSIPUG00000011189)	phykpl (ENSIPUG00000011149)	ENSIPUG00000011121	nlrx1 (ENSIPUG00000011061)	ENSIPUG00000010578	ENSIPUG00000009713	usf1 (ENSIPUG00000009489)	abcg4b (ENSIPUG00000009443)	ENSIPUG00000009371	ENSIPUG00000008910	ENSIPUG00000008237	tbcela (ENSIPUG00000008159) #22	usp2a (ENSIPUG00000008108)	ulk2 (ENSIPUG00000007930)	aldh3a2a (ENSIPUG00000007886)	tpst1 (ENSIPUG00000007859)	SGSM2 (ENSIPUG00000007736)	tnfaip1 (ENSIPUG00000007673)	timm50 (ENSIPUG00000007648)	dll3 (ENSIPUG00000007611)	CHP2 (ENSIPUG00000007572)	COX7A2 (ENSIPUG00000007538)	rnaset2l (ENSIPUG00000007500)	supt5h (ENSIPUG00000007308)	ENSIPUG00000007278	plekhg2 (ENSIPUG00000007203)	spint2 (ENSIPUG00000007188)
Cyprinoidei	ANCESTRAL SPECIES	4	ENSGT00410000028254	ENSGT00940000166045	ENSGT00390000001844.a.b.a.b	ENSGT00940000156445.o.a	ENSGT00950000183066.a.a.b.h	ENSGT00940000167059	ENSGT00940000160928.n.a	ENSGT00390000010003.h	ENSGT00950000182913.A.a.b.a	ENSGT00990000204384	ENSGT01030000234563.a.b #25	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000157083	ENSGT00940000162996.i.a.a	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT00940000162556.C	ENSGT00940000157588	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b	ENSGT00940000159315	ENSGT00950000183143.d	ENSGT01040000240503.C	ENSGT00940000164418.a.a	ENSGT00940000154629.A	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640	ENSGT00990000205582
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	13	ENSGT00390000001844.a.b.a.b.b	ENSGT00940000156445.o.a.a	ENSGT00950000183066.a.a.b.h	ENSGT00940000167059.b	ENSGT00940000160928.n.a.h	ENSGT00390000010003.h.b	ENSGT00950000182913.A.a.b.a	ENSGT00990000204384.a	ENSGT01030000234563.a.b.b #25	ENSGT00940000156097.a.c #29	ENSGT00940000157083.bb.b	ENSGT00940000162996.i.a.a.b.b.b	ENSGT00940000162996.i.a.a.b.a	ENSGT00940000162996.i.b.b	ENSGT00940000162996.i.b.a	ENSGT00530000063405.b.e.g #22	ENSGT00940000161289.c	ENSGT00940000157588.h	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b.f	ENSGT00940000159315.b	ENSGT00950000183143.d.j	ENSGT01040000240503.C.e	ENSGT00940000164418.a.a.a	ENSGT00940000154629.A.d	ENSGT00940000154629.A.c	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640.i	ENSGT00390000016264.c.a
Cyprininae_a	ANCESTRAL SPECIES	27	ENSGT00390000001844.a.b.a.b.b	ENSGT00940000156445.o.a.a	ENSGT00950000183066.a.a.b.h.a	ENSGT00940000167059.b	ENSGT00940000160928.n.a.h	ENSGT00390000010003.h.b	ENSGT00950000182913.A.a.b.a	ENSGT00990000204384.a	ENSGT01030000234563.a.b.b #25	ENSGT00940000156097.a.c #29	ENSGT00940000157083.bb.b	ENSGT00940000162996.i.a.a.b.b.b	ENSGT00940000162996.i.a.a.b.a	ENSGT00940000162996.i.b.b	ENSGT00940000162996.i.b.a	ENSGT00530000063405.b.e.g #22	ENSGT00940000161289.c	ENSGT00940000157588.h	ENSGT00940000165264.b	ENSGT00940000157944	ENSGT00390000006030.d.a.b.f	ENSGT00940000159315.b	ENSGT00950000183143.d.j	ENSGT01040000240503.C.e	ENSGT00940000164418.a.a.a	ENSGT00940000154629.A.d	ENSGT00940000154629.A.c	ENSGT00940000154550.b	ENSGT00640000091563.b	ENSGT00440000037640.i	ENSGT00390000016264.c.a
Common carp reference	MODERN SPECIES	26	bco2b (ENSCCRG00000024212)	ENSCCRG00000052103	ENSCCRG00000048417 #25	ubash3bb (ENSCCRG00000050263) #29	ENSCCRG00000015728	usf1 (ENSCCRG00000068428)	ENSCCRG00000002396	ENSCCRG00000060781	ENSCCRG00000067447	ENSCCRG00000075407	ENSCCRG00000075609	ENSCCRG00000003906	ENSCCRG00000054827	ENSCCRG00000064489	ENSCCRG00000061760	tbcela (ENSCCRG00000004721) #22	usp2a (ENSCCRG00000003689)	ENSCCRG00000003310	aldh3a2a (ENSCCRG00000003265)	ENSCCRG00000073227	tpst1 (ENSCCRG00000003207)	ENSCCRG00000071113	tnfaip1 (ENSCCRG00000043206)	timm50 (ENSCCRG00000040238)	dlc (ENSCCRG00000040244)	chp2 (ENSCCRG00000048949)	ENSCCRG00000080524	cox7a1 (ENSCCRG00000049722)	supt5h (ENSCCRG00000048960)	il15l (ENSCCRG00000061013)	ENSCCRG00000047164
Golden-line barbel	MODERN SPECIES	78	ppp2r1bb (ENSSGRG00000049675)	nkapd1 (ENSSGRG00000049891)	ENSSGRG00000001225	sdhdb (ENSSGRG00000001655)	bco2b (ENSSGRG00000001676)	ENSSGRG00000001972	SORL1 (ENSSGRG00000002048) #25	ubash3bb (ENSSGRG00000005695) #29	gkup (ENSSGRG00000005748)	usf1 (ENSSGRG00000005759)	ENSSGRG00000005789	ENSSGRG00000007110	ENSSGRG00000007466	ENSSGRG00000008151	ENSSGRG00000008152	TBCEL (ENSSGRG00000008155) #22	usp2a (ENSSGRG00000008160)	ULK2 (ENSSGRG00000008446)	aldh3a2a (ENSSGRG00000010057)	ENSSGRG00000010071	tpst1 (ENSSGRG00000010177)	SGSM2 (ENSSGRG00000010195)	tnfaip1 (ENSSGRG00000012587)	timm50 (ENSSGRG00000012588)	dlc (ENSSGRG00000012620)	chp2 (ENSSGRG00000012621)	cox7a1 (ENSSGRG00000012622)	rnaset2l (ENSSGRG00000012623)	supt5h (ENSSGRG00000012631)	ENSSGRG00000013748	ENSSGRG00000013752
Goldfish	MODERN SPECIES	6	sdhdb (ENSCARG00000016077)	bco2b (ENSCARG00000016119)	ENSCARG00000016706	SORL1 (ENSCARG00000016731) #25	ubash3bb (ENSCARG00000016944) #29	usf1 (ENSCARG00000017039)	ENSCARG00000017265	ENSCARG00000018063	ENSCARG00000018620	ENSCARG00000016082	ENSCARG00000016131	ENSCARG00000016183	ENSCARG00000016322	ENSCARG00000016447	ENSCARG00000016485	tbcela (ENSCARG00000016501) #22	usp2a (ENSCARG00000016520)	ULK2 (ENSCARG00000016677)	aldh3a2a (ENSCARG00000017118)	tpst1 (ENSCARG00000018358)	SGSM2 (ENSCARG00000018444)	tnfaip1 (ENSCARG00000019125)	timm50 (ENSCARG00000019136)	dlc (ENSCARG00000019160)	ENSCARG00000019164	chp2 (ENSCARG00000019167)	supt5h (ENSCARG00000019251)	il15l (ENSCARG00000021328)	ENSCARG00000021351	spint2 (ENSCARG00000021369)	ppp1r14ab (ENSCARG00000021378)
Cyprininae	ANCESTRAL SPECIES	155	ENSGT00940000164257.c	ENSGT00410000028254.e	ENSGT00940000166045.d	ENSGT00390000001844.a.b.a.b.a	ENSGT00940000156445.o.a.b	ENSGT00940000167059.a	ENSGT00940000160928.n.a.g	ENSGT00390000010003.h.a	ENSGT00990000204384.b	ENSGT01030000234563.a.b.a #25	ENSGT00940000156097.a.d #29	ENSGT00540000072704	ENSGT00940000157083.bb.a	ENSGT00940000162996.i.a.a.b.b.a	ENSGT00940000162996.i.a.a.a.b	ENSGT00530000063405.b.e.h #22	ENSGT00940000161289.d	ENSGT00940000162556.C	ENSGT00940000157588.g	ENSGT00390000006030.d.a.b.e	ENSGT00940000159315.a	ENSGT00950000183143.d.i	ENSGT01040000240503.C.f	ENSGT00940000164418.a.a.b
Goldfish	MODERN SPECIES	34	ENSCARG00000023554	ttc12 (ENSCARG00000023532)	zgc:162608 (ENSCARG00000023513)	SIK2 (ENSCARG00000022726)	ENSCARG00000022688	sdhdb (ENSCARG00000022679)	ENSCARG00000022671	SORL1 (ENSCARG00000022588) #25	ubash3bb (ENSCARG00000022462) #29	gkup (ENSCARG00000022354)	usf1 (ENSCARG00000022222)	ENSCARG00000022214	ENSCARG00000022209	ENSCARG00000021837	ENSCARG00000021431	tbcela (ENSCARG00000021156) #22	usp2a (ENSCARG00000021104)	ULK2 (ENSCARG00000021010)	tpst1 (ENSCARG00000020986)	SGSM2 (ENSCARG00000020952)	tnfaip1 (ENSCARG00000020931)	timm50 (ENSCARG00000020895)	dlc (ENSCARG00000020885)	chp2 (ENSCARG00000020860)	cox7a1 (ENSCARG00000020851)	rnaset2l (ENSCARG00000020845)	supt5h (ENSCARG00000019110)	ENSCARG00000018991	ENSCARG00000018961	spint2 (ENSCARG00000018949)	ppp1r14ab (ENSCARG00000018937)
Cyprininae_a	ANCESTRAL SPECIES	28	ENSGT00410000028254.e	ENSGT00940000166045.d	ENSGT00390000001844.a.b.a.b.a	ENSGT00940000156445.o.a.b	ENSGT00950000183066.a.a.b.h.b	ENSGT00940000167059.a	ENSGT00940000160928.n.a.g	ENSGT00390000010003.h.a	ENSGT00990000204384.b	ENSGT01030000234563.a.b.a #25	ENSGT00940000156097.a.d #29	ENSGT00540000072704	ENSGT00940000157083.bb.a	ENSGT00940000162996.i.a.a.b.b.a	ENSGT00940000162996.i.a.a.a.b	ENSGT00530000063405.b.e.h #22	ENSGT00940000161289.d	ENSGT00940000162556.C	ENSGT00940000157588.g	ENSGT00390000006030.d.a.b.e	ENSGT00940000159315.a	ENSGT00950000183143.d.i	ENSGT01040000240503.C.f	ENSGT00940000164418.a.a.b
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	310	drd2a (ENSSGRG00000037844)	ankk1 (ENSSGRG00000037843)	zgc:162608 (ENSSGRG00000037823)	ENSSGRG00000037822	LAYN (ENSSGRG00000037821)	SIK2 (ENSSGRG00000037818)	ppp2r1bb (ENSSGRG00000037569)	nkapd1 (ENSSGRG00000037548)	ENSSGRG00000037533	sdhdb (ENSSGRG00000037532)	ENSSGRG00000037530	SORL1 (ENSSGRG00000036899) #25	ubash3bb (ENSSGRG00000036872) #29	usf1 (ENSSGRG00000036829)	ENSSGRG00000036777	tbcela (ENSSGRG00000036772) #22
Golden-line barbel	MODERN SPECIES	232																TBCEL (ENSSGRG00000005947) #22	usp2a (ENSSGRG00000004620)	ULK2 (ENSSGRG00000002408)	ALDH3A2 (ENSSGRG00000002332)	tpst1 (ENSSGRG00000002325)	SGSM2 (ENSSGRG00000000440)	tnfaip1 (ENSSGRG00000000129)	timm50 (ENSSGRG00000000110)	dlc (ENSSGRG00000049143)	chp2 (ENSSGRG00000049138)	cox7a1 (ENSSGRG00000049137)	supt5h (ENSSGRG00000048541)	ENSSGRG00000048525	ENSSGRG00000048522	ENSSGRG00000048521	ppp1r14ab (ENSSGRG00000048519)
Common carp reference	MODERN SPECIES	39	zgc:162608 (ENSCCRG00000032913)	LAYN (ENSCCRG00000032910)	ENSCCRG00000045945	ENSCCRG00000060782	ENSCCRG00000055620	nkapd1 (ENSCCRG00000059818)	ENSCCRG00000052101	sdhdb (ENSCCRG00000049007)	ENSCCRG00000049011	ENSCCRG00000007519 #25	ubash3bb (ENSCCRG00000026083) #29	gkup (ENSCCRG00000022696)	usf1 (ENSCCRG00000022555)	ENSCCRG00000034073	ENSCCRG00000027467	tbcela (ENSCCRG00000057010) #22	usp2a (ENSCCRG00000004735)	ENSCCRG00000070626	ENSCCRG00000004854	tpst1 (ENSCCRG00000080201)	ENSCCRG00000063517	ENSCCRG00000074332	tnfaip1 (ENSCCRG00000049761)	timm50 (ENSCCRG00000049760)	dlc (ENSCCRG00000049759)	rnaset2l (ENSCCRG00000060029)	supt5h (ENSCCRG00000049733)	ENSCCRG00000048952	ENSCCRG00000073144	spint2 (ENSCCRG00000019148)	ENSCCRG00000019174
Zebrafish	MODERN SPECIES	6	nkapd1 (ENSDARG00000016724)	ENSDARG00000056804	sdhdb (ENSDARG00000030139)	bco2b (ENSDARG00000041715)	ENSDARG00000097876	SORL1 (ENSDARG00000013892) #25	ubash3bb (ENSDARG00000077399) #29	gkup (ENSDARG00000069409)	usf1 (ENSDARG00000041689)	ENSDARG00000041685	ENSDARG00000097105	ENSDARG00000078757	sb:cb37 (ENSDARG00000041645)	a2ml (ENSDARG00000056314)	ENSDARG00000093199	tbcela (ENSDARG00000002682) #22	usp2a (ENSDARG00000020107)	ULK2 (ENSDARG00000097205)	aldh3a2a (ENSDARG00000028259)	ALDH3A2 (ENSDARG00000074791)	tpst1 (ENSDARG00000073872)	SGSM2 (ENSDARG00000063307)	tnfaip1 (ENSDARG00000041565)	timm50 (ENSDARG00000031098)	dlc (ENSDARG00000002336)	chp2 (ENSDARG00000025788)	cox7a1 (ENSDARG00000069464)	rnaset2l (ENSDARG00000058413)	supt5h (ENSDARG00000042724)	il15l (ENSDARG00000007743)	ENSDARG00000114048
Clupeiformes	ANCESTRAL SPECIES	59														ENSGT00940000157069	ENSGT00390000007230.b	ENSGT00530000063405.b.e #22	ENSGT00940000161289	ENSGT01010000222313.A.b.b.b.b	ENSGT00390000012296	ENSGT00940000165285	ENSGT00940000154495.a.a	ENSGT00920000149180.b.g	ENSGT00390000014591	ENSGT00940000153571.a	ENSGT00940000161370	ENSGT00820000127055.a.a	ENSGT00940000162662	ENSGT00940000160033.c	ENSGT00390000012368	ENSGT00390000007046.b.a.b	ENSGT00940000166445
Atlantic herring	MODERN SPECIES	25	tyw1 (ENSCHAG00000001230)	tmem120ab (ENSCHAG00000001584)	gdpd1 (ENSCHAG00000001715)	hip1 (ENSCHAG00000002295)	clptm1 (ENSCHAG00000003757)	RELB (ENSCHAG00000004985)	mrpl28 (ENSCHAG00000005080)	cul5a (ENSCHAG00000005113)	ENSCHAG00000006073	ENSCHAG00000006128	ENSCHAG00000006146	DHX40 (ENSCHAG00000006177)	cltcb (ENSCHAG00000007042)	tubd1 (ENSCHAG00000007337)	vmp1 (ENSCHAG00000007359)	tbcela (ENSCHAG00000007619) #22	usp2a (ENSCHAG00000007647)	dhrs13b.2 (ENSCHAG00000007963)	TLCD3A (ENSCHAG00000008060)	gemin4 (ENSCHAG00000008077)	smtnl (ENSCHAG00000008089)	ENSCHAG00000008158	tmem199 (ENSCHAG00000008175)	poldip2 (ENSCHAG00000008195)	LRRC75A (ENSCHAG00000008495)	crk (ENSCHAG00000008508)	ENSCHAG00000008527	ENSCHAG00000008594	ENSCHAG00000008616	itpkcb (ENSCHAG00000008682)	zgc:153119 (ENSCHAG00000008699)
Denticle herring	MODERN SPECIES	10	ENSDCDG00000023166	ENSDCDG00000023168	ift80 (ENSDCDG00000023177)	smc4 (ENSDCDG00000023798)	ENSDCDG00000024973	kpna4 (ENSDCDG00000025038)	ppm1lb (ENSDCDG00000027339)	nmd3 (ENSDCDG00000027340)	sptssb (ENSDCDG00000027343)	otol1b (ENSDCDG00000027344)	ENSDCDG00000027347	cltcb (ENSDCDG00000027359)	DHX40 (ENSDCDG00000027402)	tubd1 (ENSDCDG00000027417)	vmp1 (ENSDCDG00000027419)	tbcela (ENSDCDG00000027454) #22	usp2a (ENSDCDG00000027462)	dhrs13b.2 (ENSDCDG00000027527)	smtnl (ENSDCDG00000027528)	tmem199 (ENSDCDG00000027530)	poldip2 (ENSDCDG00000027539)	LRRC75A (ENSDCDG00000027781)	crk (ENSDCDG00000027784)	itpkcb (ENSDCDG00000027789)	zgc:153119 (ENSDCDG00000027799)	snrpa (ENSDCDG00000027805)	ENSDCDG00000027809	capn5a (ENSDCDG00000027848)	ompa (ENSDCDG00000028404)	myo7aa (ENSDCDG00000028451)	GDPD4 (ENSDCDG00000029741)
Osteoglossiformes	ANCESTRAL SPECIES	24	ENSGT00530000063801.b.h	ENSGT00940000158375	ENSGT00940000153695.A.b	ENSGT00940000167856.a.a	ENSGT00940000153306.A.b	ENSGT00940000159642.f.b	ENSGT00940000155801.a	ENSGT00940000163496.b.b.a	ENSGT00950000182913.A.a.b	ENSGT01030000234563.a.b #25	ENSGT00940000156097.b #29	ENSGT00940000159186.a	ENSGT00970000194164	ENSGT00770000120972	ENSGT00940000162996.d	ENSGT00530000063405.b.e #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00920000149180.b	ENSGT00940000153571.a.b	ENSGT00820000127055.a.a.a	ENSGT00940000154335.a	ENSGT00940000164070.b	ENSGT00390000013335	ENSGT00390000017209	ENSGT00730000111188	ENSGT01030000234614.B.a.a.b.a.b	ENSGT00950000183096.a.a.c.b.f	ENSGT01030000234614.B.a.a.b.b	ENSGT00950000183026.B.c.b
Asian bonytongue	MODERN SPECIES	19	ARCN1 (ENSSFOG00015008064)	PHLDB1 (ENSSFOG00015008001)	atf5a (ENSSFOG00015007984)	zgc:158412 (ENSSFOG00015007904)	zbtb44 (ENSSFOG00015007888)	ADAMTS8 (ENSSFOG00015007875)	adamts15a (ENSSFOG00015007852)	gig2o (ENSSFOG00015007829)	bco2b (ENSSFOG00015007737)	SORL1 (ENSSFOG00015007619) #25	UBASH3B (ENSSFOG00015007541) #29	ENSSFOG00015029942	usf1l (ENSSFOG00015029689)	ENSSFOG00015007462	ENSSFOG00015007379	tbcela (ENSSFOG00015031542) #22	TECTA (ENSSFOG00015007296) #23	ENSSFOG00015029627	ENSSFOG00015007211	smtnl (ENSSFOG00015007144)	ENSSFOG00015007140	poldip2 (ENSSFOG00015007088)	LRRC75A (ENSSFOG00015007049)	crk (ENSSFOG00015007038)	tpte (ENSSFOG00015006958)	fgl1b (ENSSFOG00015006944)	ENSSFOG00015006917	vps36 (ENSSFOG00015006867)	PROSER1 (ENSSFOG00015006843)	STOML3 (ENSSFOG00015006805)	ENSSFOG00015006770
P. kingsleyae	MODERN SPECIES	78										UBASH3B (ENSPKIG00000020767) #29	ENSPKIG00000020862	zgc:113019 (ENSPKIG00000020878)	ENSPKIG00000020887	ENSPKIG00000020905	ENSPKIG00000020967	tbcela (ENSPKIG00000021079) #22	TECTA (ENSPKIG00000021126) #23	ENSPKIG00000021223	TLCD3A (ENSPKIG00000021285)	smtnl (ENSPKIG00000021302)	ENSPKIG00000021319	poldip2 (ENSPKIG00000021351)	LRRC75A (ENSPKIG00000021390)	crk (ENSPKIG00000021410)	ift20 (ENSPKIG00000021432)	tpte (ENSPKIG00000021473)	fgl1b (ENSPKIG00000021546)	ENSPKIG00000021565	ENSPKIG00000021573	vps36 (ENSPKIG00000021597)	PROSER1 (ENSPKIG00000021689)
Spotted gar	MODERN SPECIES	665	alg9 (ENSLOCG00000001352)	fdxacb1 (ENSLOCG00000001403)	mia (ENSLOCG00000001418)	cfap68 (ENSLOCG00000001435)	cryabb (ENSLOCG00000001451)	hspb2 (ENSLOCG00000001463)	dixdc1a (ENSLOCG00000001475)	dlat (ENSLOCG00000001499)	pih1d2 (ENSLOCG00000001526)	nkapd1 (ENSLOCG00000001540)	gig2p (ENSLOCG00000017859)	ubash3bb (ENSLOCG00000001560) #29	ENSLOCG00000001595	sb:cb37 (ENSLOCG00000001610)	ENSLOCG00000001706	tbcela (ENSLOCG00000001752) #22	TECTA (ENSLOCG00000001765) #23	SIK3 (ENSLOCG00000001801)	pafah1b2 (ENSLOCG00000001838)	SIDT2 (ENSLOCG00000001852)	bicdl2 (ENSLOCG00000001903)	ENSLOCG00000001926	ENSLOCG00000001939	ufc1 (ENSLOCG00000001961)	ENSLOCG00000001990	GRIK4 (ENSLOCG00000002001) #21	ARHGEF12 (ENSLOCG00000002060)	tlcd5a (ENSLOCG00000002100)	pou2f3 (ENSLOCG00000002109)	OAF (ENSLOCG00000002126)	ENSLOCG00000002144
Neopterygii	ANCESTRAL SPECIES	441																ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00530000063405.b.e #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b
Osteoglossocephalai	ANCESTRAL SPECIES	335																ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00940000156097.a #29	ENSGT00540000072704	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000162996	ENSGT00530000063405.b.e #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a
Clupeocephala	ANCESTRAL SPECIES	154																ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000157915	ENSGT01100000263573.a.b	ENSGT00940000153576.c.b.w	ENSGT00940000157119.a	ENSGT00940000156538.b	ENSGT00950000182894.C	ENSGT00510000048837	ENSGT00530000063869.A
Otomorpha	ANCESTRAL SPECIES	23	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00390000010003.g	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00970000194164	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT01030000234532.A.a.a.a.a.a	ENSGT00940000160644	ENSGT00940000162552.b	ENSGT00940000163054	ENSGT00390000013444.a.b.b.a	ENSGT00940000154911	ENSGT00940000159375.c.a	ENSGT00940000161083	ENSGT00940000159921.c
Clupeiformes	ANCESTRAL SPECIES	33	ENSGT00530000063801.b.h	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00970000194164	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00920000149180.b.h	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT01030000234532.A.a.a.a.a.a	ENSGT00940000160644	ENSGT00940000162552.b	ENSGT00940000163054.c	ENSGT00390000013444.a.b.b.a	ENSGT00940000154911	ENSGT00940000159375.c.a	ENSGT00940000161083
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	16	arcn1a (ENSDCDG00000016726)	PHLDB1 (ENSDCDG00000016623)	atf5a (ENSDCDG00000016599)	ENSDCDG00000016596	zgc:158412 (ENSDCDG00000016591)	gig2o (ENSDCDG00000016587)	snx19a (ENSDCDG00000016581)	adamts15a (ENSDCDG00000016322)	ADAMTS8 (ENSDCDG00000016318)	zbtb44 (ENSDCDG00000016317)	timm8b (ENSDCDG00000016316)	BCO2 (ENSDCDG00000016124)	UBASH3B (ENSDCDG00000016098) #29	ENSDCDG00000016094	usf1l (ENSDCDG00000015595)	TBCEL (ENSDCDG00000015551) #22	UBASH3B (ENSDCDG00000015461) #29	ENSDCDG00000015443	usf1l (ENSDCDG00000014607)	ENSDCDG00000014578	ENSDCDG00000014572 #22	TLCD3A (ENSDCDG00000014558)	ENSDCDG00000014546	sebox (ENSDCDG00000014542)	TECTA (ENSDCDG00000014462) #23	ENSDCDG00000014247	ENSDCDG00000014198	ENSDCDG00000014159	sebox (ENSDCDG00000014144)	POLDIP2 (ENSDCDG00000014073)	LRRC75A (ENSDCDG00000014027)
Denticle herring	MODERN SPECIES	16	gig2o (ENSDCDG00000016587)	snx19a (ENSDCDG00000016581)	adamts15a (ENSDCDG00000016322)	ADAMTS8 (ENSDCDG00000016318)	zbtb44 (ENSDCDG00000016317)	timm8b (ENSDCDG00000016316)	BCO2 (ENSDCDG00000016124)	UBASH3B (ENSDCDG00000016098) #29	ENSDCDG00000016094	usf1l (ENSDCDG00000015595)	TBCEL (ENSDCDG00000015551) #22	UBASH3B (ENSDCDG00000015461) #29	ENSDCDG00000015443	usf1l (ENSDCDG00000014607)	ENSDCDG00000014578	ENSDCDG00000014572 #22	TLCD3A (ENSDCDG00000014558)	ENSDCDG00000014546	sebox (ENSDCDG00000014542)	TECTA (ENSDCDG00000014462) #23	ENSDCDG00000014247	ENSDCDG00000014198	ENSDCDG00000014159	sebox (ENSDCDG00000014144)	POLDIP2 (ENSDCDG00000014073)	LRRC75A (ENSDCDG00000014027)	CRK (ENSDCDG00000014011)	ywhae2 (ENSDCDG00000013958)	ENSDCDG00000035772	SIPA1 (ENSDCDG00000035769)	ENSDCDG00000035766
Atlantic herring	MODERN SPECIES	24	atf5a (ENSCHAG00000016534)	stk36 (ENSCHAG00000016545)	zgc:158412 (ENSCHAG00000016555)	gig2o (ENSCHAG00000016564)	snx19a (ENSCHAG00000016588)	adamts15a (ENSCHAG00000016609)	ADAMTS8 (ENSCHAG00000016656)	zbtb44 (ENSCHAG00000017172)	timm8b (ENSCHAG00000017183)	BCO2 (ENSCHAG00000017209)	UBASH3B (ENSCHAG00000017462) #29	ENSCHAG00000017749	usf1l (ENSCHAG00000017757)	ENSCHAG00000017759	ENSCHAG00000017771	TBCEL (ENSCHAG00000017796) #22	TECTA (ENSCHAG00000017809) #23	ENSCHAG00000017932	ENSCHAG00000018024	ENSCHAG00000018036	sebox (ENSCHAG00000018043)	POLDIP2 (ENSCHAG00000018065)	CRK (ENSCHAG00000018337)	ywhae2 (ENSCHAG00000018357)	ENSCHAG00000018429	SIPA1 (ENSCHAG00000018448)	ENSCHAG00000018456	ENSCHAG00000018470	FERMT3 (ENSCHAG00000018546)	stip1 (ENSCHAG00000018915)	FLRT1 (ENSCHAG00000019659)
Otophysi	ANCESTRAL SPECIES	27	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00390000010003.g	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00970000194164	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00990000205129	ENSGT00390000001189.a	ENSGT00390000017214	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077
Characiphysae	ANCESTRAL SPECIES	65	ENSGT00530000063801.b.h	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00970000194164	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067
Channel catfish	MODERN SPECIES	20	c28h11orf53 (ENSIPUG00000009253)	gig2o (ENSIPUG00000009280)	ENSIPUG00000009297	Adamts15 (ENSIPUG00000009309)	ENSIPUG00000009336	zbtb44 (ENSIPUG00000009373)	timm8b (ENSIPUG00000009408)	ENSIPUG00000009419	Bco2 (ENSIPUG00000009432)	BCO2 (ENSIPUG00000009478)	UBASH3B (ENSIPUG00000009568) #29	f11r (ENSIPUG00000009630)	usf1l (ENSIPUG00000009648)	ENSIPUG00000009693	ENSIPUG00000009703	TBCEL (ENSIPUG00000009714) #22	TECTA (ENSIPUG00000009734) #23	ENSIPUG00000009795	ENSIPUG00000009857	timm22 (ENSIPUG00000009867)	spns3 (ENSIPUG00000009882)	ruvbl2 (ENSIPUG00000009910)	SPNS2 (ENSIPUG00000009939)	spns3 (ENSIPUG00000009962)	ube2g1a (ENSIPUG00000010059)	ankfy1 (ENSIPUG00000010171)	cyb5d2 (ENSIPUG00000010275)	ZZEF1 (ENSIPUG00000010298)	ATP2A3 (ENSIPUG00000010531)	camkk1 (ENSIPUG00000010647)	p2rx1 (ENSIPUG00000010709)
Characiphysae_b	ANCESTRAL SPECIES	43	ENSGT00530000063801.b.h	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000162996	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00390000011980.b.b	ENSGT00940000158829	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000153294	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797	ENSGT00940000158865	ENSGT00940000154886.a.b	ENSGT00940000154821.a.a
Characoidei	ANCESTRAL SPECIES	69	ENSGT00530000063801.b.h	ENSGT00940000158375	ENSGT00940000167856.a	ENSGT00940000163496.b.b.a	ENSGT00950000182856.b.d	ENSGT00940000155801.d	ENSGT00940000159642.f.b	ENSGT00940000153306.A.b	ENSGT00940000155479	ENSGT00950000182913.A.a.b.b	ENSGT00940000156097.b #29	ENSGT00940000159186	ENSGT00940000157083	ENSGT00940000162996	ENSGT00770000120972	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00390000011980.b.b	ENSGT00940000158829	ENSGT00390000009787	ENSGT00390000004339	ENSGT00940000155193	ENSGT00530000064194	ENSGT00390000006980	ENSGT00940000158797	ENSGT00940000158865	ENSGT00940000154886.a.b	ENSGT00940000154821.a.a
Mexicana tetra	MODERN SPECIES	32	PHLDB1 (ENSAMXG00000003398)	atf5a (ENSAMXG00000035183)	stk36 (ENSAMXG00000041287)	zgc:158412 (ENSAMXG00000040487)	gig2o (ENSAMXG00000025547)	snx19a (ENSAMXG00000003305)	adamts15a (ENSAMXG00000029685)	ADAMTS8 (ENSAMXG00000033321)	zbtb44 (ENSAMXG00000003220)	timm8b (ENSAMXG00000032954)	BCO2 (ENSAMXG00000003177)	UBASH3B (ENSAMXG00000012263) #29	f11r.1 (ENSAMXG00000042691)	usf1l (ENSAMXG00000036141)	ENSAMXG00000012322	TBCEL (ENSAMXG00000033112) #22	TECTA (ENSAMXG00000012346) #23	ENSAMXG00000012371	ENSAMXG00000012383	TIMM22 (ENSAMXG00000012393)	ptges (ENSAMXG00000040752)	ENSAMXG00000043964	usp20 (ENSAMXG00000012425)	zgc:103692 (ENSAMXG00000012482)	med22 (ENSAMXG00000038059)	rpl7a (ENSAMXG00000012525)	surf1 (ENSAMXG00000012501)	surf6 (ENSAMXG00000012546)	kyat1 (ENSAMXG00000012558)	prkaa1 (ENSAMXG00000037858)	ENSAMXG00000033982
Red-bellied piranha	MODERN SPECIES	96																TBCEL (ENSPNAG00000009784) #22	TECTA (ENSPNAG00000009763) #23	ENSPNAG00000029516	ENSPNAG00000029359	TIMM22 (ENSPNAG00000005699)	ptges (ENSPNAG00000029325)	usp20 (ENSPNAG00000029303)	zgc:103692 (ENSPNAG00000029243)	med22 (ENSPNAG00000029208)	rpl7a (ENSPNAG00000029194)	surf1 (ENSPNAG00000006796)	surf6 (ENSPNAG00000006939)	kyat1 (ENSPNAG00000029006)	prkaa1 (ENSPNAG00000004485)	ENSPNAG00000028947	ENSPNAG00000028939
Electric eel	MODERN SPECIES	29	ENSEEEG00000014556	atf5a (ENSEEEG00000014557)	stk36 (ENSEEEG00000014559)	zgc:158412 (ENSEEEG00000014561)	gig2o (ENSEEEG00000014562)	ENSEEEG00000014565	adamts15a (ENSEEEG00000014571)	ADAMTS8 (ENSEEEG00000014576)	zbtb44 (ENSEEEG00000014662)	timm8b (ENSEEEG00000014664)	BCO2 (ENSEEEG00000014676)	UBASH3B (ENSEEEG00000014808) #29	f11r.1 (ENSEEEG00000014851)	usf1l (ENSEEEG00000014855)	ENSEEEG00000014857	TBCEL (ENSEEEG00000014860) #22	TECTA (ENSEEEG00000014863) #23	ENSEEEG00000014866	ENSEEEG00000014867	ENSEEEG00000014964	TIMM22 (ENSEEEG00000014966)	ptges (ENSEEEG00000014967)	usp20 (ENSEEEG00000014969)	zgc:103692 (ENSEEEG00000014971)	med22 (ENSEEEG00000014972)	RPL7A (ENSEEEG00000014979)	surf1 (ENSEEEG00000014996)	surf6 (ENSEEEG00000014997)	kyat1 (ENSEEEG00000014998)	prkaa1 (ENSEEEG00000015011)	ENSEEEG00000015021
Cyprinoidei	ANCESTRAL SPECIES	37	ENSGT00940000157147.d	ENSGT00390000018059.a.a	ENSGT00940000159734	ENSGT00940000154416.C.c.a.a.b	ENSGT00940000181328	ENSGT00940000155214.k.b	ENSGT00440000039084.a.a	ENSGT00530000064123.h	ENSGT00940000156744.p	ENSGT00940000161616.c	ENSGT00940000155670	ENSGT00940000155434	ENSGT00940000155178	ENSGT00940000155591.i	ENSGT00940000159729	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00390000016067	ENSGT00940000153592.B.a	ENSGT01030000234555.a.a.a.c.a	ENSGT00390000017523	ENSGT00950000183135.A.a	ENSGT00940000153491.b.b.a	ENSGT00390000001189.a	ENSGT00990000210050	ENSGT00390000017214	ENSGT00390000018151	ENSGT00990000203589.a.a	ENSGT00390000015077
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	21	ENSGT00940000159734.h	ENSGT00940000154667.a.x.a	ENSGT00940000155917.cb.b	ENSGT01030000234570.d.b.a.b.a.d.a.d	ENSGT00940000156654.i.a	ENSGT00940000154416.C.c.a.a.b.d	ENSGT00940000155214.k.b.k	ENSGT00440000039084.a.a	ENSGT00530000064123.h.a.b	ENSGT00940000161616.c.j.b.a	ENSGT00940000155670.f	ENSGT00940000155434.k.a	ENSGT00940000155178.j.a	ENSGT00940000155591.i.h	ENSGT00940000159729.h	ENSGT00530000063405.b.f.c #22	ENSGT00950000183155.a.a.a.b.a #23	ENSGT00940000155545.b.d.b	ENSGT01010000222313.A.b.b.b.a.c	ENSGT00390000016067.o	ENSGT00940000153592.B.a.bb	ENSGT01030000234555.a.a.a.c.a.h	ENSGT01030000234555.a.a.a.c.a.g	ENSGT00390000017523	ENSGT00950000183135.A.a.o	ENSGT00990000205129	ENSGT00940000153491.b.b.a.g.a	ENSGT00390000001189.a.b	ENSGT00390000017214	ENSGT00390000018151.e	ENSGT00990000203589.a.a.d
Goldfish	MODERN SPECIES	23	ENSCARG00000006699	QSOX2 (ENSCARG00000006712)	ENSCARG00000006862	ak5l (ENSCARG00000006871)	cmlc1 (ENSCARG00000006892)	pappab (ENSCARG00000006927)	ENSCARG00000007367	dnm1b (ENSCARG00000007543)	ciz1b (ENSCARG00000010222)	surf4l (ENSCARG00000010239)	prdm12b (ENSCARG00000010264)	ENSCARG00000010314	ENSCARG00000010334	rab14 (ENSCARG00000010341)	gsnb (ENSCARG00000010407)	TBCEL (ENSCARG00000011662) #22	TECTA (ENSCARG00000011687) #23	ENSCARG00000012032	ENSCARG00000012299	TIMM22 (ENSCARG00000012305)	SPECC1 (ENSCARG00000012318)	adora2b (ENSCARG00000012331)	ENSCARG00000012339	ENSCARG00000012352	ABR (ENSCARG00000012507)	aspa (ENSCARG00000016584)	ENSCARG00000016597	ENSCARG00000016603	ENSCARG00000016614	ENSCARG00000016626	ENSCARG00000016632
Cyprininae_a	ANCESTRAL SPECIES		ENSGT00940000159734.h	ENSGT00940000154667.a.x.a	ENSGT00940000155917.cb.b	ENSGT01030000234570.d.b.a.b.a.d.a.d	ENSGT00940000156654.i.a	ENSGT00940000154416.C.c.a.a.b.d	ENSGT00940000155214.k.b.k	ENSGT00440000039084.a.a	ENSGT00530000064123.h.a.b	ENSGT00940000161616.c.j.b.a	ENSGT00940000155670.f	ENSGT00940000155434.k.a	ENSGT00940000155178.j.a	ENSGT00940000155591.i.h	ENSGT00940000159729.h	ENSGT00530000063405.b.f.c #22	ENSGT00950000183155.a.a.a.b.a #23	ENSGT00940000155545.b.c	ENSGT01010000222313.A.b.b.b.a.c	ENSGT00390000016067.o	ENSGT00940000153592.B.a.bb	ENSGT01030000234555.a.a.a.c.a.h	ENSGT00390000017523.d	ENSGT00950000183135.A.a.p	ENSGT00940000153491.b.b.a.g.b	ENSGT00390000001189.a.a	ENSGT00990000210050	ENSGT00970000197451	ENSGT00990000203589.a.a.c	ENSGT00390000015077.g	ENSGT00940000175063
Common carp reference	MODERN SPECIES	15	ENSCCRG00000081251	ENSCCRG00000076454	ak5l (ENSCCRG00000032721)	pappab (ENSCCRG00000032966)	ENSCCRG00000071099	ENSCCRG00000013673	dnm1b (ENSCCRG00000013708)	ciz1b (ENSCCRG00000014614)	surf4l (ENSCCRG00000014626)	prdm12b (ENSCCRG00000065826)	ENSCCRG00000041172	CNTRL (ENSCCRG00000042195)	rab14 (ENSCCRG00000064670)	gsnb (ENSCCRG00000026232)	ENSCCRG00000057895	ENSCCRG00000073860 #22	ENSCCRG00000031175 #23	ENSCCRG00000042434	ENSCCRG00000070097	adora2b (ENSCCRG00000063856)	zswim7 (ENSCCRG00000014889)	ENSCCRG00000054716	ENSCCRG00000043369	ENSCCRG00000046296	aspa (ENSCCRG00000052787)	ENSCCRG00000074738	ENSCCRG00000071106	ENSCCRG00000060567	ENSCCRG00000082713	ENSCCRG00000062815	ENSCCRG00000007726
Golden-line barbel	MODERN SPECIES	202	ENSSGRG00000010394	ak5l (ENSSGRG00000010393)	cmlc1 (ENSSGRG00000010392)	pappab (ENSSGRG00000010375)	ENSSGRG00000010373	ENSSGRG00000010369	dnm1b (ENSSGRG00000009747)	ENSSGRG00000009743	ciz1b (ENSSGRG00000009742)	prdm12b (ENSSGRG00000009741)	ENSSGRG00000009740	ENSSGRG00000009738	rab14 (ENSSGRG00000009706)	gsnb (ENSSGRG00000008720)	ENSSGRG00000008706	TBCEL (ENSSGRG00000008704) #22	TECTA (ENSSGRG00000008683) #23	ENSSGRG00000008678	TIMM22 (ENSSGRG00000008672)	SPECC1 (ENSSGRG00000008669)	adora2b (ENSSGRG00000008667)	ENSSGRG00000008665	ENSSGRG00000008663	ABR (ENSSGRG00000005790)	aspa (ENSSGRG00000005755)	ENSSGRG00000005754	zgc:85789 (ENSSGRG00000005753)	ENSSGRG00000005739	ENSSGRG00000005735	ENSSGRG00000005733	AKAP10 (ENSSGRG00000005599)
Cyprininae	ANCESTRAL SPECIES	183	ENSGT00940000159734.g.b	ENSGT00940000159734.g.a	ENSGT00940000154667.a.x.b	ENSGT00940000155917.cb.a	ENSGT01030000234570.d.b.a.b.a.d.a.c	ENSGT00940000156654.i.b	ENSGT00940000154416.C.c.a.a.b.c	ENSGT00940000155214.k.b.l	ENSGT00530000064123.h.a.a	ENSGT00940000161616.c.j.b.b	ENSGT00940000155670.e	ENSGT00940000155434.k.b	ENSGT00940000155178.j.b	ENSGT00940000155591.i.g	ENSGT00940000159729.g	ENSGT00530000063405.b.f.d #22	ENSGT00950000183155.a.a.a.b.b #23	ENSGT00940000155545.b.d.a	ENSGT01010000222313.A.b.b.b.a.d	ENSGT00390000016067.p	ENSGT00940000153592.B.a.cb
Goldfish	MODERN SPECIES	44	cmlc1 (ENSCARG00000013031)	pappab (ENSCARG00000013055)	ENSCARG00000013176	dnm1b (ENSCARG00000013285)	surf4l (ENSCARG00000015088)	prdm12b (ENSCARG00000015170)	ENSCARG00000015262	ENSCARG00000015863	ENSCARG00000015866	ENSCARG00000015874	ENSCARG00000015913	ENSCARG00000015938	rab14 (ENSCARG00000015972)	gsnb (ENSCARG00000016069)	ttf1.1 (ENSCARG00000017165)	TBCEL (ENSCARG00000017227) #22	TECTA (ENSCARG00000017275) #23	ENSCARG00000017650	ENSCARG00000017983	hmgcra (ENSCARG00000017999)	ankrd31 (ENSCARG00000018048)	gcnt4a (ENSCARG00000018059)	pomt1 (ENSCARG00000018150)	CARD9 (ENSCARG00000020060)	ubac1 (ENSCARG00000020087)	ENSCARG00000020132	rasgrf2b (ENSCARG00000020171)	otpb (ENSCARG00000020358)	ENSCARG00000020375	lhfpl2b (ENSCARG00000020383)	homer1b (ENSCARG00000020404)
Cyprininae_a	ANCESTRAL SPECIES	75	ENSGT00940000159244.a.i	ENSGT00940000159734.g.a	ENSGT00940000154667.a.x.b	ENSGT00940000155917.cb.a	ENSGT01030000234570.d.b.a.b.a.d.a.c	ENSGT00940000156654.i.b	ENSGT00940000154416.C.c.a.a.b.c	ENSGT00940000155214.k.b.l	ENSGT00530000064123.h.a.a	ENSGT00940000161616.c.j.b.b	ENSGT00940000155670.e	ENSGT00940000155434.k.b	ENSGT00940000155178.j.b	ENSGT00940000155591.i.g	ENSGT00940000159729.g	ENSGT00530000063405.b.f.d #22	ENSGT00950000183155.a.a.a.b.b #23	ENSGT00940000155545.b.d.a	ENSGT01010000222313.A.b.b.b.a.d	ENSGT00390000016067.p	ENSGT00940000153592.B.a.cb	ENSGT01030000234555.a.a.a.c.a.g	ENSGT00390000017523.c	ENSGT00950000183135.A.a.o	ENSGT00990000205129	ENSGT00940000153491.b.b.a.g.a	ENSGT00390000001189.a.b	ENSGT00390000017214	ENSGT00390000018151.e	ENSGT00990000203589.a.a.d	ENSGT00390000015077.h
Golden-line barbel	DUPLICATION
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	94	ENSSGRG00000028054	ENSSGRG00000028056	QSOX2 (ENSSGRG00000028065)	ENSSGRG00000028164	ak5l (ENSSGRG00000028166)	cmlc1 (ENSSGRG00000028169)	pappab (ENSSGRG00000028171)	ENSSGRG00000028172	dnm1b (ENSSGRG00000028191)	prdm12b (ENSSGRG00000028396)	ENSSGRG00000028398	CNTRL (ENSSGRG00000028420)	rab14 (ENSSGRG00000028422)	gsnb (ENSSGRG00000028505)	ENSSGRG00000028758	ENSSGRG00000028760 #22	TBCEL (ENSSGRG00000028762) #22	TECTA (ENSSGRG00000028764) #23	ENSSGRG00000028768	ENSSGRG00000028962	TIMM22 (ENSSGRG00000028964)	SPECC1 (ENSSGRG00000028965)	adora2b (ENSSGRG00000028966)	zswim7 (ENSSGRG00000028969)	ENSSGRG00000028998	aspa (ENSSGRG00000031150)	zgc:85789 (ENSSGRG00000031159)	ENSSGRG00000031192	ENSSGRG00000031193	ENSSGRG00000031195	AKAP10 (ENSSGRG00000031205)
Golden-line barbel	MODERN SPECIES	1450													ENSSGRG00000035078	ENSSGRG00000035077	ENSSGRG00000035076	ENSSGRG00000035075 #22
Golden-line barbel	MODERN SPECIES	94	ENSSGRG00000028056	QSOX2 (ENSSGRG00000028065)	ENSSGRG00000028164	ak5l (ENSSGRG00000028166)	cmlc1 (ENSSGRG00000028169)	pappab (ENSSGRG00000028171)	ENSSGRG00000028172	dnm1b (ENSSGRG00000028191)	prdm12b (ENSSGRG00000028396)	ENSSGRG00000028398	CNTRL (ENSSGRG00000028420)	rab14 (ENSSGRG00000028422)	gsnb (ENSSGRG00000028505)	ENSSGRG00000028758	ENSSGRG00000028760 #22	TBCEL (ENSSGRG00000028762) #22	TECTA (ENSSGRG00000028764) #23	ENSSGRG00000028768	ENSSGRG00000028962	TIMM22 (ENSSGRG00000028964)	SPECC1 (ENSSGRG00000028965)	adora2b (ENSSGRG00000028966)	zswim7 (ENSSGRG00000028969)	ENSSGRG00000028998	aspa (ENSSGRG00000031150)	zgc:85789 (ENSSGRG00000031159)	ENSSGRG00000031192	ENSSGRG00000031193	ENSSGRG00000031195	AKAP10 (ENSSGRG00000031205)	selenow1 (ENSSGRG00000031271)
Common carp reference	MODERN SPECIES	7	ENSCCRG00000032723	ak5l (ENSCCRG00000013667)	pappab (ENSCCRG00000021074)	ENSCCRG00000035913	dnm1b (ENSCCRG00000065243)	surf4l (ENSCCRG00000002039)	prdm12b (ENSCCRG00000017042)	ENSCCRG00000061068	ENSCCRG00000068711	ENSCCRG00000019087	ENSCCRG00000026198	CNTRL (ENSCCRG00000053196)	rab14 (ENSCCRG00000042187)	gsnb (ENSCCRG00000041230)	ENSCCRG00000026371	ENSCCRG00000054381 #22	ENSCCRG00000026398 #23	ENSCCRG00000014729	ENSCCRG00000063549	ENSCCRG00000080638	ENSCCRG00000014880	zswim7 (ENSCCRG00000066509)	ENSCCRG00000014926	ENSCCRG00000014932	ENSCCRG00000047806	aspa (ENSCCRG00000066540)	zgc:85789 (ENSCCRG00000025392)	ENSCCRG00000025384	ENSCCRG00000076793	ENSCCRG00000014943	selenow1 (ENSCCRG00000014951)
Zebrafish	MODERN SPECIES	20	ENSDARG00000095296	dnm1b (ENSDARG00000009281)	ciz1b (ENSDARG00000089461)	surf4l (ENSDARG00000035131)	prdm12b (ENSDARG00000007430)	ENSDARG00000021004	ENSDARG00000088492	rab14 (ENSDARG00000074246)	ttf1.2 (ENSDARG00000093999)	ttf1.1 (ENSDARG00000091967)	ENSDARG00000093403	ENSDARG00000094043	ENSDARG00000092508	gsnb (ENSDARG00000045262)	ENSDARG00000094107	TBCEL (ENSDARG00000019525) #22	TECTA (ENSDARG00000059558) #23	ENSDARG00000074120	ENSDARG00000114187	ENSDARG00000098860	TIMM22 (ENSDARG00000091413)	SPECC1 (ENSDARG00000029480)	adora2b (ENSDARG00000002533)	zswim7 (ENSDARG00000067608)	ENSDARG00000116802	abr (ENSDARG00000095180)	ABR (ENSDARG00000059587)	aspa (ENSDARG00000005154)	pho (ENSDARG00000035133)	C5H11orf54 (ENSDARG00000110147)	ENSDARG00000098537
Euteleosteomorpha	ANCESTRAL SPECIES	254														ENSGT00940000166058	ENSGT00390000006114 #12	ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Acanthomorphata	ANCESTRAL SPECIES	14	ENSGT00940000157126.f #8	ENSGT00940000159426	ENSGT00940000159414	ENSGT00940000157641	ENSGT00940000159095	ENSGT00940000156492	ENSGT00940000153883.b	ENSGT00940000156758	ENSGT00390000006208.a	ENSGT00940000157317	ENSGT00390000008162.e	ENSGT00530000063743.b	ENSGT00950000183012.B.a	ENSGT00990000203615.b.b.a	ENSGT00390000006114 #12	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Euacanthomorphacea	ANCESTRAL SPECIES	19	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01030000234886.e.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Percomorphaceae	ANCESTRAL SPECIES	40	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Tiger tail seahorse	MODERN SPECIES	174								orai2 (ENSHCOG00000010251)	USP28 (ENSHCOG00000010203)	HTR3A (ENSHCOG00000010180)	zbtb16a (ENSHCOG00000010142)	ncam1a (ENSHCOG00000010107)	cadm1a (ENSHCOG00000010083)	sc5d (ENSHCOG00000010054) #24	plekhb1 (ENSHCOG00000010039)	TBCEL (ENSHCOG00000010031) #22	TECTA (ENSHCOG00000010017) #23	USP2 (ENSHCOG00000000312)	ENSHCOG00000009950	ENSHCOG00000009939	CRK (ENSHCOG00000009925)	ywhae2 (ENSHCOG00000009904)	gria4b (ENSHCOG00000009872)	elmod1 (ENSHCOG00000009827)	slc35f2 (ENSHCOG00000009797)	cul5a (ENSHCOG00000009785)	CAPN5 (ENSHCOG00000009737)	ompb (ENSHCOG00000009715)	MYO7A (ENSHCOG00000009703)	ENSHCOG00000009612	AQP11 (ENSHCOG00000009586)
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Aplocheiloidei	ANCESTRAL SPECIES	59	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Mangrove rivulus	MODERN SPECIES	50	ENSKMAG00000017837	ENSKMAG00000017788	CBL (ENSKMAG00000017742)	alkbh4 (ENSKMAG00000017732)	lrwd1 (ENSKMAG00000017709)	bckdk (ENSKMAG00000017680)	orai2 (ENSKMAG00000017667)	USP28 (ENSKMAG00000017634)	HTR3B (ENSKMAG00000017606)	HTR3A (ENSKMAG00000017587)	zbtb16a (ENSKMAG00000017553)	ncam1a (ENSKMAG00000017383)	cadm1a (ENSKMAG00000017298)	sc5d (ENSKMAG00000017276) #24	plekhb1 (ENSKMAG00000017267)	TBCEL (ENSKMAG00000017245) #22	TECTA (ENSKMAG00000017180) #23	ENSKMAG00000017155
Turquoise killifish	MODERN SPECIES	1620	ALKBH4 (ENSNFUG00015016612)	LRWD1 (ENSNFUG00015016599)	BCKDK (ENSNFUG00015016121)	ORAI2 (ENSNFUG00015016067)	USP28 (ENSNFUG00015015499)	HTR3B (ENSNFUG00015015311)	HTR3A (ENSNFUG00015015300)	ENSNFUG00015015221	ncam1a (ENSNFUG00015008043)	ENSNFUG00015007686	ENSNFUG00015007681	cadm1a (ENSNFUG00015007654)	ENSNFUG00015007648	SC5DL (ENSNFUG00015007629) #24	PLEKHB1 (ENSNFUG00015007619)	TBCELB (ENSNFUG00015007615) #22	TECTA (ENSNFUG00015007575) #23	ENSNFUG00015007542	ENSNFUG00015007534	ENSNFUG00015007530	FAM57A (ENSNFUG00015007509)	CRK (ENSNFUG00015007491)	ENSNFUG00015007489	YWHAE1 (ENSNFUG00015007462)	gria4b (ENSNFUG00015006891)	ELMOD1 (ENSNFUG00015006801)	slc35f2 (ENSNFUG00015006792)	CUL5B (ENSNFUG00015006751)	ompb (ENSNFUG00015006723)	CAPN5B (ENSNFUG00015006698)	ENSNFUG00015006690
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00950000183116.b.a.a.b.a.b.m.b	ENSGT00940000156944.a.a	ENSGT00940000170476	ENSGT00940000163509.a.b	ENSGT00940000163701.b.a.b.b.b	ENSGT00550000074939
Poeciliinae	ANCESTRAL SPECIES	26	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00950000183116.b.a.a.b.a.b.m.b	ENSGT00940000156944.a.a	ENSGT00940000170476	ENSGT00940000163509.a.b	ENSGT00940000163701.b.a.b.b.b	ENSGT00550000074939
Poecilia	ANCESTRAL SPECIES	42	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009571.a.b.a.b.g.a.a.b.a.b.b	ENSGT00940000156944.a.a	ENSGT00940000170476	ENSGT00940000155641.g.a.d	ENSGT00940000163509.a.b
NAME_6	ANCESTRAL SPECIES	44	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00950000183116.b.a.a.b.a.b.m.b.n.a.a	ENSGT00950000183116.b.a.a.b.a.b.m.b.n.a.b	ENSGT00390000009571.a.b.a.b.g.a.a.b.a.b.b	ENSGT00940000156944.a.a	ENSGT00940000170476
Sailfin molly	MODERN SPECIES	1282								ENSPLAG00000019329	ENSPLAG00000019348	sowahcb (ENSPLAG00000019359)	dhrsx (ENSPLAG00000019366)	ENSPLAG00000019372	ENSPLAG00000019383	sc5d (ENSPLAG00000019401) #24	plekhb1 (ENSPLAG00000019410)	ENSPLAG00000019422 #22
Amazon molly	MODERN SPECIES	393	tmem120aa (ENSPFOG00000016887)	ENSPFOG00000016824	CBL (ENSPFOG00000016793)	alkbh4 (ENSPFOG00000016780)	lrwd1 (ENSPFOG00000016751)	bckdk (ENSPFOG00000016728)	orai2 (ENSPFOG00000016719)	USP28 (ENSPFOG00000016610)	HTR3B (ENSPFOG00000016571)	HTR3A (ENSPFOG00000016513)	zbtb16a (ENSPFOG00000016496)	ncam1a (ENSPFOG00000016319)	cadm1a (ENSPFOG00000016257)	sc5d (ENSPFOG00000016232) #24	plekhb1 (ENSPFOG00000016206)	TBCEL (ENSPFOG00000016174) #22	TECTA (ENSPFOG00000015997) #23	ENSPFOG00000015935	ENSPFOG00000023404	ENSPFOG00000015931	ENSPFOG00000015915	CRK (ENSPFOG00000015900)	ENSPFOG00000015881
Guppy	MODERN SPECIES	444	tmem120aa (ENSPREG00000015067)	ENSPREG00000015099	CBL (ENSPREG00000015193)	alkbh4 (ENSPREG00000015249)	lrwd1 (ENSPREG00000015261)	bckdk (ENSPREG00000015279)	orai2 (ENSPREG00000015290)	USP28 (ENSPREG00000015298)	HTR3B (ENSPREG00000015317)	HTR3A (ENSPREG00000015349)	zbtb16a (ENSPREG00000015369)	ncam1a (ENSPREG00000015467)	cadm1a (ENSPREG00000015756)	sc5d (ENSPREG00000015849) #24	ENSPREG00000015863	TBCEL (ENSPREG00000015882) #22	TECTA (ENSPREG00000015928) #23	ENSPREG00000016014	ENSPREG00000016026	ENSPREG00000016058	ENSPREG00000016074	ENSPREG00000016089	ENSPREG00000016097	ENSPREG00000016115	gria4b (ENSPREG00000016137)	elmod1 (ENSPREG00000016181)	slc35f2 (ENSPREG00000016242)	CUL5 (ENSPREG00000016258)	ENSPREG00000016289	ADRA1B (ENSPREG00000016321)	rhot1a (ENSPREG00000016349)
Platyfish	MODERN SPECIES	2	ENSXMAG00000022631	ENSXMAG00000021344	ENSXMAG00000025064	CBL (ENSXMAG00000008763)	alkbh4 (ENSXMAG00000008785)	lrwd1 (ENSXMAG00000008786)	orai2 (ENSXMAG00000008815)	USP28 (ENSXMAG00000008818)	HTR3B (ENSXMAG00000008834)	HTR3A (ENSXMAG00000008835)	zbtb16a (ENSXMAG00000008853)	ncam1a (ENSXMAG00000008861)	cadm1a (ENSXMAG00000012398)	sc5d (ENSXMAG00000029314) #24	plekhb1 (ENSXMAG00000012387)	TBCEL (ENSXMAG00000012372) #22	TECTA (ENSXMAG00000012336) #23	ENSXMAG00000012318	ENSXMAG00000003573	ENSXMAG00000011551	ENSXMAG00000023400	ywhae2 (ENSXMAG00000000541)	gria4b (ENSXMAG00000008529)	elmod1 (ENSXMAG00000012302)	slc35f2 (ENSXMAG00000015958)	CUL5 (ENSXMAG00000012228)	cbln10 (ENSXMAG00000012226)	ENSXMAG00000025188	tmem120aa (ENSXMAG00000011139)	styxl1 (ENSXMAG00000011154)	HEPACAM (ENSXMAG00000027038)
NAME_4	ANCESTRAL SPECIES	195				ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00950000183116.b.a.a.b.a.b.m.b	ENSGT00940000156944.a.a	ENSGT00940000170476
Mummichog	MODERN SPECIES	2233	tmem120aa (ENSFHEG00000021208)	ENSFHEG00000021355	CBL (ENSFHEG00000021459)	alkbh4 (ENSFHEG00000021469)	bckdk (ENSFHEG00000021556)	lrwd1 (ENSFHEG00000021575)	orai2 (ENSFHEG00000021577)	USP28 (ENSFHEG00000021605)	HTR3B (ENSFHEG00000021702)	HTR3A (ENSFHEG00000021751)	zbtb16a (ENSFHEG00000021769)	ncam1a (ENSFHEG00000021827)	cadm1a (ENSFHEG00000022123)	sc5d (ENSFHEG00000022165) #24	plekhb1 (ENSFHEG00000022204)	ENSFHEG00000022219 #22	TECTA (ENSFHEG00000022299) #23	ENSFHEG00000022347	ENSFHEG00000022353	ENSFHEG00000022394	CRK (ENSFHEG00000022422)	ywhae2 (ENSFHEG00000022443)	gria4b (ENSFHEG00000022505)	elmod1 (ENSFHEG00000022618)	slc35f2 (ENSFHEG00000022630)	CUL5 (ENSFHEG00000022705)	cbln10 (ENSFHEG00000022738)	ADRA1B (ENSFHEG00000022768)	ENSFHEG00000000559	ENSFHEG00000022793
Sheepshead minnow	MODERN SPECIES	155				bckdk (ENSCVAG00000006975)	orai2 (ENSCVAG00000006987)	USP28 (ENSCVAG00000007037)	ENSCVAG00000007046	HTR3B (ENSCVAG00000007072)	HTR3A (ENSCVAG00000007099)	zbtb16a (ENSCVAG00000007140)	ncam1a (ENSCVAG00000000230)	ENSCVAG00000008194	cadm1a (ENSCVAG00000008229)	sc5d (ENSCVAG00000008255) #24	plekhb1 (ENSCVAG00000008263)	TBCEL (ENSCVAG00000008273) #22	TECTA (ENSCVAG00000008337) #23	ENSCVAG00000008352	ENSCVAG00000008360	ENSCVAG00000008374	CRK (ENSCVAG00000008397)	ywhae2 (ENSCVAG00000008428)	gria4b (ENSCVAG00000008986)
Oryzias	ANCESTRAL SPECIES	14	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b	ENSGT00510000046732.A.c
Oryzias_b	ANCESTRAL SPECIES	13	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h
Javanese ricefish	MODERN SPECIES	5	HEPACAM (ENSOJAG00000004591)	tmem120aa (ENSOJAG00000004417)	ENSOJAG00000004377	CBL (ENSOJAG00000004198)	alkbh4 (ENSOJAG00000004153)	lrwd1 (ENSOJAG00000004121)	bckdk (ENSOJAG00000003839)	orai2 (ENSOJAG00000003752)	USP28 (ENSOJAG00000003216)	HTR3B (ENSOJAG00000003096)	HTR3A (ENSOJAG00000003089)	zbtb16a (ENSOJAG00000003079)	ncam1a (ENSOJAG00000002758)	cadm1a (ENSOJAG00000002600)	sc5d (ENSOJAG00000002565) #24	TBCEL (ENSOJAG00000002530) #22	plekhb1 (ENSOJAG00000002508)	TECTA (ENSOJAG00000002408) #23	ENSOJAG00000002376	ENSOJAG00000002367	ENSOJAG00000002357	CRK (ENSOJAG00000002345)	ywhae2 (ENSOJAG00000002299)	gria4b (ENSOJAG00000001902)	elmod1 (ENSOJAG00000001746)	slc35f2 (ENSOJAG00000001681)	ompb (ENSOJAG00000020893)	CAPN5 (ENSOJAG00000020775)	DOC2B (ENSOJAG00000020663)	rcc1l (ENSOJAG00000020598)	tlcd5b (ENSOJAG00000020586)
Indian medaka	MODERN SPECIES	4	lrwd1 (ENSOMEG00000002529)	CBL (ENSOMEG00000002516)	alkbh4 (ENSOMEG00000002505)	bckdk (ENSOMEG00000002498)	orai2 (ENSOMEG00000002487)	USP28 (ENSOMEG00000002475)	ENSOMEG00000000648	HTR3A (ENSOMEG00000002452)	zbtb16a (ENSOMEG00000002434)	ncam1a (ENSOMEG00000002424)	ENSOMEG00000002402	ENSOMEG00000002397	cadm1a (ENSOMEG00000002384)	sc5d (ENSOMEG00000002344) #24	plekhb1 (ENSOMEG00000002335)	TBCEL (ENSOMEG00000002324) #22	TECTA (ENSOMEG00000002309) #23	ENSOMEG00000002284	ENSOMEG00000002274	ENSOMEG00000002261	CRK (ENSOMEG00000002246)	ywhae2 (ENSOMEG00000002238)	gria4b (ENSOMEG00000002214)	MYO7A (ENSOMEG00000002179)	CAPN5 (ENSOMEG00000002138)	ompb (ENSOMEG00000002119)	CUL5 (ENSOMEG00000002107)	slc35f2 (ENSOMEG00000000029)	elmod1 (ENSOMEG00000000025)	AQP11 (ENSOMEG00000002076)	ENSOMEG00000002068
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT01030000234886.e.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000014525	alkbh4 (ENSORLG00000025649)	lrwd1 (ENSORLG00000014559)	bckdk (ENSORLG00000014575)	orai2 (ENSORLG00000014583)	ENSORLG00000025543	USP28 (ENSORLG00000014609)	ENSORLG00000014619	HTR3A (ENSORLG00000014631)	zbtb16a (ENSORLG00000014640)	ncam1a (ENSORLG00000014681)	ENSORLG00000025108	cadm1a (ENSORLG00000014698)	sc5d (ENSORLG00000028563) #24	plekhb1 (ENSORLG00000021993)	ENSORLG00000014756 #22	TECTA (ENSORLG00000014771) #23	ENSORLG00000014803	ENSORLG00000014818	ENSORLG00000014825	ENSORLG00000023366	ywhae2 (ENSORLG00000014845)	ENSORLG00000026199	gria4b (ENSORLG00000014865)	ENSORLG00000029515	elmod1 (ENSORLG00000014887)	slc35f2 (ENSORLG00000014902)	ENSORLG00000014938	ENSORLG00000014975	ompb (ENSORLG00000014978)	ENSORLG00000015036
Chinese medaka	MODERN SPECIES	1004	mks1 (ENSOSIG00000021690)	ap2b1 (ENSOSIG00000021672)	HEPACAM (ENSOSIG00000021637)	ENSOSIG00000021626	CBL (ENSOSIG00000021516)	alkbh4 (ENSOSIG00000021509)	bckdk (ENSOSIG00000021436)	USP28 (ENSOSIG00000021087)	ENSOSIG00000021056	HTR3A (ENSOSIG00000021015)	zbtb16a (ENSOSIG00000021001)	ncam1a (ENSOSIG00000017708)	cadm1a (ENSOSIG00000017497)	sc5d (ENSOSIG00000017492) #24	plekhb1 (ENSOSIG00000017484)	TBCEL (ENSOSIG00000017479) #22	TECTA (ENSOSIG00000017435) #23	ENSOSIG00000017423	ENSOSIG00000017416	ENSOSIG00000017409	CRK (ENSOSIG00000017403)	ywhae2 (ENSOSIG00000017400)	gria4b (ENSOSIG00000012207)
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Pomacentridae	ANCESTRAL SPECIES	129	ENSGT00390000000537.y	ENSGT00390000000141	ENSGT00950000183055.a.b	ENSGT00940000165106	ENSGT00940000164016	ENSGT00940000161062	ENSGT00530000063786.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b
Pomacentridae_A	ANCESTRAL SPECIES	226													ENSGT00940000159055	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b
Amphiprion	ANCESTRAL SPECIES	71													ENSGT00940000159055	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b.g	ENSGT00390000008162.e	ENSGT00530000064449.A.b.b.t.a.a	ENSGT00940000157662.g.a	ENSGT00390000009554	ENSGT00940000163875.a.b.b	ENSGT01030000234556.a.b.a	ENSGT00530000063743.b	ENSGT00950000183012.B.a
Clown anemonefish	MODERN SPECIES	1465													AMOT (ENSAOCG00000017007)	sc5d (ENSAOCG00000016996) #24	plekhb1 (ENSAOCG00000016971)	TBCEL (ENSAOCG00000002661) #22	TECTA (ENSAOCG00000016912) #23	ENSAOCG00000016835	ENSAOCG00000016815	ENSAOCG00000016805	CRK (ENSAOCG00000016780)	ywhae2 (ENSAOCG00000016753)	gria4b (ENSAOCG00000016721)	elmod1 (ENSAOCG00000016670)
Orange clownfish	MODERN SPECIES	6	ENSAPEG00000012575	ENSAPEG00000012553	ENSAPEG00000012532	ENSAPEG00000012459	ENSAPEG00000012446	smfn (ENSAPEG00000012435)	HLCS (ENSAPEG00000012399)	ENSAPEG00000012375	ENSAPEG00000012361	ENSAPEG00000012261	ENSAPEG00000012238	tiprl (ENSAPEG00000012195)	AMOT (ENSAPEG00000012171)	sc5d (ENSAPEG00000012101) #24	plekhb1 (ENSAPEG00000012090)	TBCEL (ENSAPEG00000012084) #22	TECTA (ENSAPEG00000011945) #23	ENSAPEG00000011897	ENSAPEG00000011869	ENSAPEG00000011836	CRK (ENSAPEG00000011806)	ywhae2 (ENSAPEG00000011754)	gria4b (ENSAPEG00000011689)	elmod1 (ENSAPEG00000011637)	tlcd5b (ENSAPEG00000011625)	ENSAPEG00000011613	ENSAPEG00000011590	emsy (ENSAPEG00000011470)	ENSAPEG00000011454	mpzl1l (ENSAPEG00000011425)	rabep1 (ENSAPEG00000011338)
Spiny chromis	MODERN SPECIES	857																TBCEL (ENSAPOG00000008464) #22	TECTA (ENSAPOG00000008433) #23	ENSAPOG00000008355	ENSAPOG00000008318	RPS6KL1 (ENSAPOG00000008287)	dlst (ENSAPOG00000008268)	prox2 (ENSAPOG00000008201)	ESRRB (ENSAPOG00000000215)
Bicolor damselfish	MODERN SPECIES	357													cadm1a (ENSSPAG00000019589)	sc5d (ENSSPAG00000019553) #24	plekhb1 (ENSSPAG00000019539)	TBCEL (ENSSPAG00000019526) #22	TECTA (ENSSPAG00000019472) #23	ENSSPAG00000019437	ENSSPAG00000019407	ENSSPAG00000019386	CRK (ENSSPAG00000019354)	ENSSPAG00000019319	ENSSPAG00000019308	ENSSPAG00000019288	ENSSPAG00000019256	mtif3 (ENSSPAG00000019236)	heca (ENSSPAG00000019210)
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Burton s mouthbrooder	MODERN SPECIES	282	tmem120aa (ENSHBUG00000011945)	ENSHBUG00000000332	CBL (ENSHBUG00000011977)	alkbh4 (ENSHBUG00000011984)	lrwd1 (ENSHBUG00000011990)	bckdk (ENSHBUG00000012027)	orai2 (ENSHBUG00000012054)	USP28 (ENSHBUG00000012068)	HTR3B (ENSHBUG00000012103)	HTR3A (ENSHBUG00000012136)	zbtb16a (ENSHBUG00000012173)	ncam1a (ENSHBUG00000012359)	cadm1a (ENSHBUG00000012460)	sc5d (ENSHBUG00000012491) #24	plekhb1 (ENSHBUG00000012501)	TBCEL (ENSHBUG00000012511) #22	TECTA (ENSHBUG00000012560) #23	ENSHBUG00000012616	ENSHBUG00000012627	ENSHBUG00000012649	ENSHBUG00000012670	ywhae2 (ENSHBUG00000012708)	gria4b (ENSHBUG00000012754)	elmod1 (ENSHBUG00000012814)	slc35f2 (ENSHBUG00000012868)	CUL5 (ENSHBUG00000012991)	ompb (ENSHBUG00000013019)	CAPN5 (ENSHBUG00000013069)	MYO7A (ENSHBUG00000013188)	GDPD4 (ENSHBUG00000013213)	ENSHBUG00000013243
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00940000155838.f	ENSGT00940000155772.a.b.d	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT01050000245001.a.a.a.a.a.a	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.g.a	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Zebra mbuna	MODERN SPECIES	1092	ENSMZEG00005010230	CBL (ENSMZEG00005010282)	alkbh4 (ENSMZEG00005010298)	lrwd1 (ENSMZEG00005010320)	bckdk (ENSMZEG00005010369)	orai2 (ENSMZEG00005010395)	USP28 (ENSMZEG00005010418)	HTR3B (ENSMZEG00005010442)	HTR3A (ENSMZEG00005010453)	zbtb16a (ENSMZEG00005010471)	ncam1a (ENSMZEG00005010503)	ENSMZEG00005010641	cadm1a (ENSMZEG00005010667)	sc5d (ENSMZEG00005010700) #24	plekhb1 (ENSMZEG00005010705)	TBCEL (ENSMZEG00005010743) #22	TECTA (ENSMZEG00005010758) #23	ENSMZEG00005010774	ENSMZEG00005010803	ENSMZEG00005010810	CRK (ENSMZEG00005010819)	ywhae2 (ENSMZEG00005010829)	gria4b (ENSMZEG00005010846)	elmod1 (ENSMZEG00005010879)	slc35f2 (ENSMZEG00005010904)	CUL5 (ENSMZEG00005010930)	CAPN5 (ENSMZEG00005010960)	ompb (ENSMZEG00005010970)	MYO7A (ENSMZEG00005011034)	ENSMZEG00005011111	ENSMZEG00005011123
Eastern happy	MODERN SPECIES	1	lrwd1 (ENSACLG00000021705)	bckdk (ENSACLG00000021728)	ENSACLG00000021776	orai2 (ENSACLG00000021781)	USP28 (ENSACLG00000021806)	HTR3B (ENSACLG00000021873)	HTR3A (ENSACLG00000021894)	zbtb16a (ENSACLG00000021957)	ncam1a (ENSACLG00000022016)	ENSACLG00000022242	ENSACLG00000022259	cadm1a (ENSACLG00000022313)	ENSACLG00000022333	sc5d (ENSACLG00000022339) #24	plekhb1 (ENSACLG00000022359)	TBCEL (ENSACLG00000022396) #22	TECTA (ENSACLG00000022411) #23	ENSACLG00000022467	ENSACLG00000022557	ENSACLG00000022564	CRK (ENSACLG00000022569)	ywhae2 (ENSACLG00000022608)	gria4b (ENSACLG00000022681)	ENSACLG00000022741	elmod1 (ENSACLG00000022760)	slc35f2 (ENSACLG00000022846)	CUL5 (ENSACLG00000022875)	CAPN5 (ENSACLG00000022960)	ompb (ENSACLG00000023024)	ENSACLG00000023038	MYO7A (ENSACLG00000023046)
P. nyererei	MODERN SPECIES	310	tmem120aa (ENSPNYG00000010285)	ENSPNYG00000010312	CBL (ENSPNYG00000010361)	alkbh4 (ENSPNYG00000010388)	lrwd1 (ENSPNYG00000010403)	bckdk (ENSPNYG00000010460)	orai2 (ENSPNYG00000010503)	USP28 (ENSPNYG00000010533)	HTR3B (ENSPNYG00000010565)	HTR3A (ENSPNYG00000010596)	zbtb16a (ENSPNYG00000010616)	ncam1a (ENSPNYG00000010651)	cadm1a (ENSPNYG00000010714)	sc5d (ENSPNYG00000010741) #24	plekhb1 (ENSPNYG00000010757)	TBCEL (ENSPNYG00000010775) #22	TECTA (ENSPNYG00000010819) #23	ENSPNYG00000010915	ENSPNYG00000010944	ENSPNYG00000010953	CRK (ENSPNYG00000010973)	ywhae2 (ENSPNYG00000010998)	gria4b (ENSPNYG00000011041)	elmod1 (ENSPNYG00000011122)	slc35f2 (ENSPNYG00000011151)	CUL5 (ENSPNYG00000011193)	CAPN5 (ENSPNYG00000011323)	ompb (ENSPNYG00000011353)	MYO7A (ENSPNYG00000011380)	ENSPNYG00000011471	ENSPNYG00000011495
Lyretail cichlid	MODERN SPECIES	297	tmem120aa (ENSNBRG00000010647)	ENSNBRG00000010694	CBL (ENSNBRG00000010817)	alkbh4 (ENSNBRG00000010872)	lrwd1 (ENSNBRG00000010906)	bckdk (ENSNBRG00000011012)	orai2 (ENSNBRG00000011047)	USP28 (ENSNBRG00000011079)	HTR3B (ENSNBRG00000011109)	HTR3A (ENSNBRG00000011137)	zbtb16a (ENSNBRG00000011170)	ncam1a (ENSNBRG00000011478)	cadm1a (ENSNBRG00000012694)	sc5d (ENSNBRG00000012834) #24	plekhb1 (ENSNBRG00000012849)	TBCEL (ENSNBRG00000012856) #22	TECTA (ENSNBRG00000012877) #23	ENSNBRG00000012931	ENSNBRG00000012965	ENSNBRG00000012996	CRK (ENSNBRG00000013010)	ywhae2 (ENSNBRG00000013043)	gria4b (ENSNBRG00000013070)	elmod1 (ENSNBRG00000013140)	slc35f2 (ENSNBRG00000013171)	CUL5 (ENSNBRG00000013257)	CAPN5 (ENSNBRG00000013353)	ompb (ENSNBRG00000013376)	MYO7A (ENSNBRG00000013391)	ENSNBRG00000013486	ENSNBRG00000013531
Nile tilapia	MODERN SPECIES	1	CBL (ENSONIG00000009458)	alkbh4 (ENSONIG00000041679)	lrwd1 (ENSONIG00000009466)	bckdk (ENSONIG00000009468)	orai2 (ENSONIG00000009473)	USP28 (ENSONIG00000009476)	htr3b (ENSONIG00000009486)	HTR3A (ENSONIG00000009491)	zbtb16a (ENSONIG00000009495)	ENSONIG00000032583	ncam1a (ENSONIG00000009496)	cadm1a (ENSONIG00000009502)	ENSONIG00000040892	sc5d (ENSONIG00000034053) #24	plekhb1 (ENSONIG00000009505)	TBCEL (ENSONIG00000037823) #22	TECTA (ENSONIG00000009508) #23	ENSONIG00000009511	ENSONIG00000009512	ENSONIG00000009514	CRK (ENSONIG00000009518)	ywhae2 (ENSONIG00000032945)	gria4b (ENSONIG00000009523)	elmod1 (ENSONIG00000009536)	slc35f2 (ENSONIG00000009539)	CUL5 (ENSONIG00000009545)	CAPN5 (ENSONIG00000009550)	ompb (ENSONIG00000021460)	ENSONIG00000027896	MYO7A (ENSONIG00000009556)	ENSONIG00000009570
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Carangaria	ANCESTRAL SPECIES	16	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.j	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Pleuronectoidei	ANCESTRAL SPECIES	32	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.j	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Tongue sole	MODERN SPECIES	10	mtnr1bb (ENSCSEG00000016588)	ENSCSEG00000016582	tmem120aa (ENSCSEG00000016565)	ENSCSEG00000016538	CBL (ENSCSEG00000016526)	alkbh4 (ENSCSEG00000016518)	bckdk (ENSCSEG00000016496)	orai2 (ENSCSEG00000016488)	USP28 (ENSCSEG00000016461)	HTR3A (ENSCSEG00000016449)	zbtb16a (ENSCSEG00000016440)	ncam1a (ENSCSEG00000015969)	cadm1a (ENSCSEG00000015889)	sc5d (ENSCSEG00000015866) #24	plekhb1 (ENSCSEG00000015863)	ENSCSEG00000015849 #22	TECTA (ENSCSEG00000015826) #23	ENSCSEG00000015810	ENSCSEG00000015801	ENSCSEG00000015789	CRK (ENSCSEG00000015777)	ENSCSEG00000015677	gria4b (ENSCSEG00000015575)	elmod1 (ENSCSEG00000015527)	slc35f2 (ENSCSEG00000015491)	CUL5 (ENSCSEG00000015456)	ompb (ENSCSEG00000015444)	CAPN5 (ENSCSEG00000015427)	MYO7A (ENSCSEG00000015251)	ENSCSEG00000015202	ENSCSEG00000015230
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.i.a	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b.f #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Seriola	ANCESTRAL SPECIES	2	ENSGT00940000158544	ENSGT00950000183109.c.a.b	ENSGT00940000167475	ENSGT00940000159431	ENSGT00940000163584.b.a.a	ENSGT00950000182787.E.d.e.a	ENSGT00390000007635	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b.i.a	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b.f #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Greater amberjack	MODERN SPECIES	119	ENSSDUG00000022358	nop16 (ENSSDUG00000022349)	GRK6 (ENSSDUG00000022332)	ENSSDUG00000022326	DBN1 (ENSSDUG00000022321)	zgc:77151 (ENSSDUG00000022313)	ENSSDUG00000022108	ENSSDUG00000022063	USP28 (ENSSDUG00000022005)	HTR3A (ENSSDUG00000021988)	zbtb16a (ENSSDUG00000021980)	ncam1a (ENSSDUG00000021944)	cadm1a (ENSSDUG00000021931)	sc5d (ENSSDUG00000021927) #24	plekhb1 (ENSSDUG00000021924)	TBCEL (ENSSDUG00000021915) #22	TECTA (ENSSDUG00000021894) #23	ENSSDUG00000021878	ENSSDUG00000021868	ENSSDUG00000021858	CRK (ENSSDUG00000021850)	ywhae2 (ENSSDUG00000021846)	gria4b (ENSSDUG00000021812)
Yellowtail amberjack	MODERN SPECIES	2770			DBN1 (ENSSLDG00000001682)	ENSSLDG00000001758	ENSSLDG00000001856	ENSSLDG00000002535	USP28 (ENSSLDG00000002564)	HTR3B (ENSSLDG00000002836)	HTR3A (ENSSLDG00000002895)	zbtb16a (ENSSLDG00000002956)	ncam1a (ENSSLDG00000003022)	ENSSLDG00000003181	cadm1a (ENSSLDG00000003202)	sc5d (ENSSLDG00000003252) #24	plekhb1 (ENSSLDG00000003276)	TBCEL (ENSSLDG00000003290) #22	ENSSLDG00000003328 #23	ENSSLDG00000003459	ENSSLDG00000003504	ENSSLDG00000003520	CRK (ENSSLDG00000003550)	ywhae2 (ENSSLDG00000003588)
Barramundi perch	MODERN SPECIES	188						orai2 (ENSLCAG00010014472)	USP28 (ENSLCAG00010014538)	ENSLCAG00010014646	HTR3A (ENSLCAG00010014653)	zbtb16a (ENSLCAG00010014654)	ncam1a (ENSLCAG00010014737)	cadm1a (ENSLCAG00010015019)	ENSLCAG00010015027	sc5d (ENSLCAG00010015030) #24	plekhb1 (ENSLCAG00010015034)	TBCEL (ENSLCAG00010015040) #22	ENSLCAG00010015044	TECTA (ENSLCAG00010015048) #23	ENSLCAG00010015084	ENSLCAG00010015209	ENSLCAG00010015212	CRK (ENSLCAG00010015215)	ENSLCAG00010015233
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Climbing perch	MODERN SPECIES	5	ENSATEG00000001242	ENSATEG00000001223	ENSATEG00000001218	ENSATEG00000001215	ENSATEG00000001209	ENSATEG00000001167	ENSATEG00000025973	USP28 (ENSATEG00000001158)	ENSATEG00000001100	HTR3A (ENSATEG00000001062)	zbtb16a (ENSATEG00000001020)	ncam1a (ENSATEG00000000934)	cadm1a (ENSATEG00000000889)	SC5D (ENSATEG00000000855) #24	ENSATEG00000000795	ENSATEG00000000785 #22	ENSATEG00000000678 #23	ENSATEG00000000617	ENSATEG00000000611	ENSATEG00000000597	ENSATEG00000000567	ENSATEG00000000528	ENSATEG00000000466	elmod1 (ENSATEG00000000421)	slc35f2 (ENSATEG00000000410)	ENSATEG00000000395	ompb (ENSATEG00000000380)	CAPN5 (ENSATEG00000000315)	MYO7A (ENSATEG00000000073)	GDPD4 (ENSATEG00000000053)	ENSATEG00000023313
Siamese fighting fish	MODERN SPECIES	5	CBL (ENSBSLG00000004357)	alkbh4 (ENSBSLG00000004731)	lrwd1 (ENSBSLG00000004809)	bckdk (ENSBSLG00000004982)	orai2 (ENSBSLG00000005607)	USP28 (ENSBSLG00000005773)	HTR3B (ENSBSLG00000006276)	HTR3A (ENSBSLG00000006334)	zbtb16a (ENSBSLG00000006391)	ncam1a (ENSBSLG00000007042)	cadm1a (ENSBSLG00000010755)	sc5d (ENSBSLG00000011172) #24	plekhb1 (ENSBSLG00000011676)	sc5d (ENSBSLG00000011812) #24	sc5d (ENSBSLG00000011936) #24	TBCEL (ENSBSLG00000012032) #22	USP2 (ENSBSLG00000012236)	ENSBSLG00000012541	ENSBSLG00000013062	CRK (ENSBSLG00000013097)	ywhae2 (ENSBSLG00000013175)	ENSBSLG00000013482	elmod1 (ENSBSLG00000014921)	slc35f2 (ENSBSLG00000014935)	CUL5 (ENSBSLG00000014944)	CAPN5 (ENSBSLG00000015069)	ompb (ENSBSLG00000015121)	MYO7A (ENSBSLG00000015124)	ENSBSLG00000015677	AQP11 (ENSBSLG00000015706)	ENSBSLG00000015712
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000003130	ENSMAMG00000002862	ENSMAMG00000002831	ENSMAMG00000002825	ENSMAMG00000002695	ENSMAMG00000002659	ENSMAMG00000002642	USP28 (ENSMAMG00000002619)	ENSMAMG00000002589	HTR3A (ENSMAMG00000002560)	zbtb16a (ENSMAMG00000002542)	ncam1a (ENSMAMG00000002392)	cadm1a (ENSMAMG00000028196)	SC5D (ENSMAMG00000002321) #24	ENSMAMG00000002295	ENSMAMG00000002275 #22	ENSMAMG00000002201 #23	ENSMAMG00000002185	ENSMAMG00000002154	ENSMAMG00000002121	ENSMAMG00000025496	ENSMAMG00000025128	ENSMAMG00000002020	elmod1 (ENSMAMG00000001980)	slc35f2 (ENSMAMG00000001954)	ENSMAMG00000001854	ompb (ENSMAMG00000001842)	ENSMAMG00000001817	ENSMAMG00000001667	ENSMAMG00000001646	ENSMAMG00000001623
Eupercaria	ANCESTRAL SPECIES	26	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Tetraodontidae	ANCESTRAL SPECIES	57	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00940000154248.b	ENSGT00940000160597	ENSGT00550000075141	ENSGT00390000011674	ENSGT01030000234646.A	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT01090000260061.c.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00530000063816.c.a	ENSGT00530000064411.b.j	ENSGT00510000046732.A.c	ENSGT00390000006114 #12
Fugu	MODERN SPECIES	6	ENSTRUG00000012139	CBL (ENSTRUG00000012330)	lrwd1 (ENSTRUG00000012493)	ENSTRUG00000030306	ddx51 (ENSTRUG00000012670)	smim8 (ENSTRUG00000026822)	bckdk (ENSTRUG00000012782)	USP28 (ENSTRUG00000012940)	ENSTRUG00000013084	HTR3A (ENSTRUG00000013117)	ENSTRUG00000025710	zbtb16a (ENSTRUG00000002959)	ncam1a (ENSTRUG00000002966)	cadm1a (ENSTRUG00000012483)	sc5d (ENSTRUG00000012442) #24	ENSTRUG00000012392 #22	TECTA (ENSTRUG00000012236) #23	ENSTRUG00000012109	ENSTRUG00000027293	CRK (ENSTRUG00000011971)	ywhae2 (ENSTRUG00000030321)	gria4b (ENSTRUG00000011517)	elmod1 (ENSTRUG00000011350)	slc35f2 (ENSTRUG00000011198)	cul5a (ENSTRUG00000010860)	CAPN5 (ENSTRUG00000010580)	ompb (ENSTRUG00000024676)	ENSTRUG00000010002	ENSTRUG00000009902	FCHSD2 (ENSTRUG00000009588)	foxred1 (ENSTRUG00000009457) #12
Tetraodon	MODERN SPECIES	26	cdk1 (ENSTNIG00000003176)	HNRNPLL (ENSTNIG00000003177)	pick1 (ENSTNIG00000003178)	plbd1a (ENSTNIG00000003179)	ENSTNIG00000003180	ENSTNIG00000003183	pepd (ENSTNIG00000003184)	ENSTNIG00000003185	H2AZ1 (ENSTNIG00000003186)	ENSTNIG00000003187	sema3ga (ENSTNIG00000003189)	gadd45gb.1 (ENSTNIG00000003192)	pias2 (ENSTNIG00000003200)	olfm1a (ENSTNIG00000003202)	sc5d (ENSTNIG00000003223) #24	TBCEL (ENSTNIG00000003224) #22	eefsec (ENSTNIG00000003225)	RFT1 (ENSTNIG00000003226)	prkcda (ENSTNIG00000003227)	ENSTNIG00000003237	ENSTNIG00000003238	kdm2aa (ENSTNIG00000003239)	psme4b (ENSTNIG00000003254)	chac2 (ENSTNIG00000003256)	chac2 (ENSTNIG00000003255)	FARP2 (ENSTNIG00000003257)	boka (ENSTNIG00000003258)	atg4b (ENSTNIG00000003259)	dtymk (ENSTNIG00000003260)	agxta (ENSTNIG00000003261)	zgc:103559 (ENSTNIG00000003262)
Eupecaria_A	ANCESTRAL SPECIES	25	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Ballan wrasse	MODERN SPECIES	577													cadm1a (ENSLBEG00000022822)	sc5d (ENSLBEG00000022801) #24	plekhb1 (ENSLBEG00000022776)	TBCEL (ENSLBEG00000022755) #22	ENSLBEG00000022738	TECTA (ENSLBEG00000022703) #23
Eupecaria_B	ANCESTRAL SPECIES	25	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Perciformes	ANCESTRAL SPECIES	26	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000175256	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000154465.C.e	ENSGT00530000067490	ENSGT00940000154465.C.f
Lumpfish	MODERN SPECIES	5	ENSCLMG00005002171	CBL (ENSCLMG00005002297)	alkbh4 (ENSCLMG00005002322)	lrwd1 (ENSCLMG00005002323)	bckdk (ENSCLMG00005002325)	orai2 (ENSCLMG00005002492)	USP28 (ENSCLMG00005002496)	ENSCLMG00005002501	HTR3B (ENSCLMG00005002502)	HTR3A (ENSCLMG00005002504)	zbtb16a (ENSCLMG00005002505)	ncam1a (ENSCLMG00005002506)	cadm1a (ENSCLMG00005002511)	sc5d (ENSCLMG00005002573) #24	plekhb1 (ENSCLMG00005002574)	TBCEL (ENSCLMG00005002580) #22	TECTA (ENSCLMG00005002582) #23	ENSCLMG00005002584	ENSCLMG00005002591	ENSCLMG00005002592	CRK (ENSCLMG00005002594)	ENSCLMG00005002597	gria4b (ENSCLMG00005002599)	ENSCLMG00005002735	elmod1 (ENSCLMG00005002736)	slc35f2 (ENSCLMG00005002737)	CUL5 (ENSCLMG00005002738)	CAPN5 (ENSCLMG00005002777)	ompb (ENSCLMG00005003014)	MYO7A (ENSCLMG00005003019)	ENSCLMG00005003031
Stickleback	MODERN SPECIES	7	ENSGACG00000020762	CBL (ENSGACG00000020763)	alkbh4 (ENSGACG00000020764)	lrwd1 (ENSGACG00000020765)	bckdk (ENSGACG00000020766)	orai2 (ENSGACG00000020767)	USP28 (ENSGACG00000020768)	HTR3B (ENSGACG00000020769)	HTR3A (ENSGACG00000020770)	zbtb16a (ENSGACG00000020771)	ENSGACG00000020772	ncam1a (ENSGACG00000020773)	ENSGACG00000020774	sc5d (ENSGACG00000020775) #24	plekhb1 (ENSGACG00000020776)	TBCEL (ENSGACG00000020777) #22	TECTA (ENSGACG00000020778) #23	ENSGACG00000020779	ENSGACG00000020780	ENSGACG00000020781	ENSGACG00000020782	gria4b (ENSGACG00000020783)	slc35f2 (ENSGACG00000020784)	CUL5 (ENSGACG00000020785)	CAPN5 (ENSGACG00000020786)	ompb (ENSGACG00000020787)	MYO7A (ENSGACG00000020788)	ENSGACG00000020789	ENSGACG00000020790	ENSGACG00000020791	ENSGACG00000020792
Perciformes_a	ANCESTRAL SPECIES	28	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a	ENSGT00530000064411.b
Channel bull blenny	MODERN SPECIES	5	tmem120aa (ENSCGOG00000002067)	ENSCGOG00000002165	CBL (ENSCGOG00000002179)	alkbh4 (ENSCGOG00000002223)	lrwd1 (ENSCGOG00000002242)	orai2 (ENSCGOG00000002399)	USP28 (ENSCGOG00000002448)	ENSCGOG00000003633	HTR3A (ENSCGOG00000003639)	zbtb16a (ENSCGOG00000003651)	ncam1a (ENSCGOG00000003766)	cadm1a (ENSCGOG00000006586)	plekhb1 (ENSCGOG00000006629)	sc5d (ENSCGOG00000006632) #24	ENSCGOG00000006640	TBCEL (ENSCGOG00000006645) #22	TECTA (ENSCGOG00000006649) #23	USP2 (ENSCGOG00000006705)	ENSCGOG00000006727	ENSCGOG00000006730	CRK (ENSCGOG00000006734)	ywhae2 (ENSCGOG00000006754)	ENSCGOG00000006848	ENSCGOG00000006854	ENSCGOG00000006874	gria4b (ENSCGOG00000006893)	ENSCGOG00000008817	dtx2 (ENSCGOG00000008822)	dtx2 (ENSCGOG00000008823)	GTF2IRD1 (ENSCGOG00000008831)	CLIP2 (ENSCGOG00000008942)
Pike perch	MODERN SPECIES	22	tmem120aa (ENSSLUG00000013649)	ENSSLUG00000013617	CBL (ENSSLUG00000013607)	alkbh4 (ENSSLUG00000013601)	lrwd1 (ENSSLUG00000013581)	bckdk (ENSSLUG00000013381)	orai2 (ENSSLUG00000013354)	USP28 (ENSSLUG00000012849)	ENSSLUG00000012775	HTR3A (ENSSLUG00000012772)	zbtb16a (ENSSLUG00000012764)	ncam1a (ENSSLUG00000011620)	cadm1a (ENSSLUG00000011243)	sc5d (ENSSLUG00000011203) #24	plekhb1 (ENSSLUG00000011154)	TBCEL (ENSSLUG00000011144) #22	TECTA (ENSSLUG00000011137) #23	ENSSLUG00000011130	ENSSLUG00000011121	ENSSLUG00000011113	ENSSLUG00000011107	CRK (ENSSLUG00000011101)	ywhae2 (ENSSLUG00000011090)	gria4b (ENSSLUG00000010926)	elmod1 (ENSSLUG00000010894)	slc35f2 (ENSSLUG00000010876)	CUL5 (ENSSLUG00000010739)	ompb (ENSSLUG00000010701)	CAPN5 (ENSSLUG00000010588)	MYO7A (ENSSLUG00000010473)	GDPD4 (ENSSLUG00000010437)
Eupecaria_C	ANCESTRAL SPECIES	32	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	20	ENSGT00390000007848.a.d	ENSGT00940000155838.f	ENSGT00940000155772.a.b	ENSGT00390000006344	ENSGT00940000154248.b	ENSGT01030000234646.A	ENSGT00390000015354.c.b.b	ENSGT00940000157670	ENSGT00940000158478	ENSGT00940000157705	ENSGT00940000154616.a.a	ENSGT00940000155743.b	ENSGT00940000156093.e.a	ENSGT00550000075101.q #24	ENSGT00390000013989.b	ENSGT00530000063405.b.f #22	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00820000127055.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.d	ENSGT00390000009497.a	ENSGT00940000156536.e.a	ENSGT00940000155350.h	ENSGT01000000221741	ENSGT00940000156251.b	ENSGT00530000063816.c.a
European seabass	MODERN SPECIES	4	ENSDLAG00005011479	ENSDLAG00005011444	ENSDLAG00005010994	ENSDLAG00005010976	ENSDLAG00005010912	ENSDLAG00005032202	ENSDLAG00005026494	USP28 (ENSDLAG00005009252)	ENSDLAG00005009202	HTR3A (ENSDLAG00005009191)	zbtb16a (ENSDLAG00005031923)	ncam1a (ENSDLAG00005007552)	cadm1a (ENSDLAG00005007417)	SC5D (ENSDLAG00005007407) #24	ENSDLAG00005007398	ENSDLAG00005007383 #22	ENSDLAG00005007358 #23	ENSDLAG00005006899	ENSDLAG00005006884	ENSDLAG00005006871	ENSDLAG00005033831	ENSDLAG00005006495	ENSDLAG00005005016	elmod1 (ENSDLAG00005004868)	slc35f2 (ENSDLAG00005004826)	ENSDLAG00005029608	ENSDLAG00005030622	ompb (ENSDLAG00005030150)	CAPN5 (ENSDLAG00005004342)	MYO7A (ENSDLAG00005021005)	ENSDLAG00005020939
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005006180	PRDM6 (ENSLCRG00005006178)	PPIC (ENSLCRG00005006176)	SNX2 (ENSLCRG00005004430)	ENSLCRG00005004398	sncaip (ENSLCRG00005004396)	ENSLCRG00005004395	ENSLCRG00005004319	ENSLCRG00005004317	hs3st1l2 (ENSLCRG00005004316)	h2az2b (ENSLCRG00005004300)	purbb (ENSLCRG00005004297)	ENSLCRG00005004294	il1b (ENSLCRG00005004292)	styxl1 (ENSLCRG00005004290)	TBCEL (ENSLCRG00005004289) #22	TECTA (ENSLCRG00005004285) #23	ENSLCRG00005004282	ENSLCRG00005004280	ENSLCRG00005004279	CRK (ENSLCRG00005004276)	ywhae2 (ENSLCRG00005004273)	gria4b (ENSLCRG00005002153)	elmod1 (ENSLCRG00005002125)	slc35f2 (ENSLCRG00005002122)	CUL5 (ENSLCRG00005000547)	ompb (ENSLCRG00005000544)	CAPN5 (ENSLCRG00005000535)	MYO7A (ENSLCRG00005000522)	GDPD4 (ENSLCRG00005000515)	AQP11 (ENSLCRG00005000514)
Gilthead seabream	MODERN SPECIES	4	lrwd1 (ENSSAUG00010013930)	ENSSAUG00010013922	ddx51 (ENSSAUG00010013909)	bckdk (ENSSAUG00010013833)	orai2 (ENSSAUG00010013825)	USP28 (ENSSAUG00010013587)	HTR3B (ENSSAUG00010013576)	HTR3A (ENSSAUG00010013486)	zbtb16a (ENSSAUG00010013480)	ENSSAUG00010013478	ncam1a (ENSSAUG00010012993)	ENSSAUG00010012971	cadm1a (ENSSAUG00010012903)	sc5d (ENSSAUG00010012900) #24	plekhb1 (ENSSAUG00010012898)	TBCEL (ENSSAUG00010012897) #22	TECTA (ENSSAUG00010012883) #23	ENSSAUG00010012876	ENSSAUG00010012874	ENSSAUG00010012873	CRK (ENSSAUG00010012872)	ywhae2 (ENSSAUG00010012870)	gria4b (ENSSAUG00010003244)	elmod1 (ENSSAUG00010002970)	ENSSAUG00010002967	slc35f2 (ENSSAUG00010002965)	CUL5 (ENSSAUG00010002685)	ompb (ENSSAUG00010002655)	CAPN5 (ENSSAUG00010002636)	MYO7A (ENSSAUG00010002598)	GDPD4 (ENSSAUG00010002587)
Pinecone sodierfish	MODERN SPECIES	5	lrwd1 (ENSMMDG00005010558)	bckdk (ENSMMDG00005010570)	orai2 (ENSMMDG00005010635)	USP28 (ENSMMDG00005010690)	HTR3B (ENSMMDG00005014804)	HTR3A (ENSMMDG00005014807)	zbtb16a (ENSMMDG00005014811)	ncam1a (ENSMMDG00005014838)	cadm1a (ENSMMDG00005015899)	sc5d (ENSMMDG00005015902) #24	plekhb1 (ENSMMDG00005015912)	fam168a (ENSMMDG00005015913)	ENSMMDG00005015914	ENSMMDG00005015917	ENSMMDG00005015924	TBCEL (ENSMMDG00005015925) #22	ENSMMDG00005015928	TECTA (ENSMMDG00005015931) #23	ENSMMDG00005015939	ENSMMDG00005015943	ENSMMDG00005015946	POLDIP2 (ENSMMDG00005015948)	CRK (ENSMMDG00005016019)	ywhae2 (ENSMMDG00005016020)	gria4b (ENSMMDG00005016022)	elmod1 (ENSMMDG00005016024)	slc35f2 (ENSMMDG00005016026)	CUL5 (ENSMMDG00005016029)	CAPN5 (ENSMMDG00005016036)	ompb (ENSMMDG00005016043)	MYO7A (ENSMMDG00005016059)
Cod	MODERN SPECIES	20	ENSGMOG00000006084	ENSGMOG00000024602	ENSGMOG00000006075 #24	ENSGMOG00000006069	ENSGMOG00000031628	ncam1a (ENSGMOG00000019522)	zbtb16a (ENSGMOG00000012795)	HTR3A (ENSGMOG00000024159)	HTR3A (ENSGMOG00000012790)	ENSGMOG00000012786	USP28 (ENSGMOG00000012774)	ENSGMOG00000013151	ENSGMOG00000013164	ENSGMOG00000011048	ENSGMOG00000011057 #12	ENSGMOG00000011115 #22	ENSGMOG00000011123 #23	ENSGMOG00000011147	ENSGMOG00000011162	ENSGMOG00000022235	ENSGMOG00000032933	ENSGMOG00000024669	gria4b (ENSGMOG00000000875)	elmod1 (ENSGMOG00000023607)	slc35f2 (ENSGMOG00000011228)	ENSGMOG00000011242	CAPN5 (ENSGMOG00000011259)	MYO7A (ENSGMOG00000011272)	GDPD4 (ENSGMOG00000011309)	ENSGMOG00000029085	DLAT (ENSGMOG00000002727)
Protacanthopterygii	ANCESTRAL SPECIES	180														ENSGT00940000166058	ENSGT00390000006114 #12	ENSGT00530000063405.b.f #22	ENSGT00960000189385	ENSGT00950000183155.a.a.a.b #23	ENSGT00940000155545.b	ENSGT01010000222313.A.b.b.b.a	ENSGT00940000154495.a.b	ENSGT00940000155677.b	ENSGT00940000159782.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a	ENSGT00940000156536.e.a	ENSGT00390000009497.a	ENSGT00940000155350.h	ENSGT00940000156251.b	ENSGT00530000063816.c.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	35	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00390000007799	ENSGT00940000159111.j #21	ENSGT00940000157662.g.a.b	ENSGT00390000008162.e	ENSGT00940000157627.e	ENSGT00390000012008.a.c	ENSGT00940000155587.a.a.a	ENSGT00940000158657.g	ENSGT00500000044966	ENSGT01100000263551.a.a.c	ENSGT00940000177774	ENSGT00800000125277	ENSGT00390000006659.db	ENSGT00390000000083.b	ENSGT00530000063405.b.f.e #22	ENSGT00950000183155.a.a.a.b.c #23	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00390000006115	ENSGT00390000007799	ENSGT00940000159111.j #21	ENSGT00940000157662.g.a.b	ENSGT00390000008162.e	ENSGT00940000157627.e	ENSGT00390000012008.a.c	ENSGT00940000155587.a.a.a	ENSGT00940000158657.g	ENSGT00500000044966	ENSGT01100000263551.a.a.c	ENSGT00940000177774	ENSGT00800000125277	ENSGT00390000006659.db	ENSGT00390000000083.b	ENSGT00530000063405.b.f.e #22	ENSGT00950000183155.a.a.a.b.c #23	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00940000178427	ENSGT00390000007799	ENSGT00940000159111.j #21	ENSGT00940000157662.g.a.b	ENSGT00390000008162.e	ENSGT00940000157627.e	ENSGT00390000012008.a.c	ENSGT00940000155587.a.a.a	ENSGT00940000158657.g	ENSGT00500000044966	ENSGT01100000263551.a.a.c	ENSGT00940000177774	ENSGT00800000125277	ENSGT00390000006659.db	ENSGT00390000000083.b	ENSGT00530000063405.b.f.e #22	ENSGT00950000183155.a.a.a.b.c #23	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00390000007799	ENSGT00940000159111.j #21	ENSGT00970000193754.a.a	ENSGT00940000157662.g.a.b	ENSGT00390000008162.e	ENSGT00940000157627.e	ENSGT00390000012008.a.c	ENSGT00940000155587.a.a.a	ENSGT00940000158657.g	ENSGT00500000044966	ENSGT01100000263551.a.a.c	ENSGT00940000177774	ENSGT00800000125277	ENSGT00390000006659.db	ENSGT00390000000083.b	ENSGT00530000063405.b.f.e #22	ENSGT00950000183155.a.a.a.b.c #23	ENSGT00940000155545.b.f	ENSGT00940000161289.n.a.b	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00940000161370.b	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b
Chinook salmon	MODERN SPECIES	23	cenatac (ENSOTSG00005036312)	GRIK4 (ENSOTSG00005036320) #21	ENSOTSG00005036324	ARHGEF12 (ENSOTSG00005036326)	ENSOTSG00005036328	tlcd5b (ENSOTSG00005036330)	pou2f3 (ENSOTSG00005036331)	ENSOTSG00005036336	ENSOTSG00005036349	ENSOTSG00005036612	HEPACAM (ENSOTSG00005036614)	ENSOTSG00005036617	ENSOTSG00005036620	tiprl (ENSOTSG00005036624)	riox2 (ENSOTSG00005036627)	TBCEL (ENSOTSG00005036631) #22	TECTA (ENSOTSG00005036633) #23	USP2 (ENSOTSG00005036637)	ENSOTSG00005036639	ENSOTSG00005036641	LRRC75A (ENSOTSG00005036645)	ENSOTSG00005036649	ywhae2 (ENSOTSG00005036653)	gria4b (ENSOTSG00005036677)	elmod1 (ENSOTSG00005038210)	CUL5 (ENSOTSG00005038212)	CAPN5 (ENSOTSG00005038217)	ENSOTSG00005038291	MYO7A (ENSOTSG00005038307)	GDPD4 (ENSOTSG00005038471)	ENSOTSG00005038473
Coho salmon	MODERN SPECIES	20	cenatac (ENSOKIG00005026650)	GRIK4 (ENSOKIG00005026573) #21	ENSOKIG00005026560	ARHGEF12 (ENSOKIG00005026411)	tlcd5b (ENSOKIG00005026381)	pou2f3 (ENSOKIG00005026363)	OAF (ENSOKIG00005026349)	ENSOKIG00005026152	slc37a2 (ENSOKIG00005024266)	ENSOKIG00005024178	ENSOKIG00005024167	ENSOKIG00005024159	ENSOKIG00005024145	tiprl (ENSOKIG00005024121)	riox2 (ENSOKIG00005024114)	TBCEL (ENSOKIG00005024097) #22	TECTA (ENSOKIG00005023526) #23	ENSOKIG00005023383	ENSOKIG00005023343	POLDIP2 (ENSOKIG00005023285)	LRRC75A (ENSOKIG00005023242)	CRK (ENSOKIG00005023227)	ENSOKIG00005023163	ENSOKIG00005023153	gria4b (ENSOKIG00005021164)	elmod1 (ENSOKIG00005020974)	CUL5 (ENSOKIG00005020220)	CAPN5 (ENSOKIG00005048805)	MYO7A (ENSOKIG00005047699)	GDPD4 (ENSOKIG00005047456)	ENSOKIG00005047437
Rainbow trout	MODERN SPECIES	1	GRIK4 (ENSOMYG00000033071) #21	ARHGEF12 (ENSOMYG00000033234)	tlcd5b (ENSOMYG00000033341)	pou2f3 (ENSOMYG00000033350)	OAF (ENSOMYG00000033358)	ENSOMYG00000033399	slc37a2 (ENSOMYG00000033593)	ENSOMYG00000034457	ENSOMYG00000034466	ENSOMYG00000063258	ENSOMYG00000034476	ENSOMYG00000034500	ENSOMYG00000034516	ENSOMYG00000034547	ENSOMYG00000077253	ENSOMYG00000034583 #22	ENSOMYG00000034687 #23	ENSOMYG00000034836	ENSOMYG00000034858	ENSOMYG00000034867	ENSOMYG00000034898	ENSOMYG00000034951	ENSOMYG00000001569	ENSOMYG00000001718	gria4b (ENSOMYG00000002271)	ENSOMYG00000002427	elmod1 (ENSOMYG00000072212)	ENSOMYG00000002671	CAPN5 (ENSOMYG00000002761)	MYO7A (ENSOMYG00000004362)	GDPD4 (ENSOMYG00000005865)
Salmo	ANCESTRAL SPECIES	17	ENSGT01100000263516.a.b.b.b.b.a.a.b.a.a.a.a.a.a.e	ENSGT00390000007799	ENSGT00940000159111.j #21	ENSGT00940000157662.g.a.b	ENSGT00390000008162.e	ENSGT00940000157627.e	ENSGT00390000012008.a.c	ENSGT00940000155587.a.a.a	ENSGT00940000158657.g	ENSGT00500000044966	ENSGT01100000263551.a.a.c	ENSGT00940000177774	ENSGT00800000125277	ENSGT00390000006659.db	ENSGT00390000000083.b	ENSGT00530000063405.b.f.e #22	ENSGT00950000183155.a.a.a.b.c #23	ENSGT00940000155545.b.f	ENSGT01010000222313.A.b.b.b.a.e	ENSGT00940000154495.a.b.a	ENSGT00940000153571.a.h	ENSGT00820000127055.a.b.b	ENSGT01090000260061.c.b.id.b	ENSGT00940000155677.b.i.a	ENSGT00940000159782.b.a	ENSGT00940000156648.c.a.a	ENSGT00940000156536.e.a.g	ENSGT00390000009497.a.c	ENSGT00940000155350.h.c	ENSGT00940000156251.b.b	ENSGT00530000063816.c.a
River trout	MODERN SPECIES	10	ENSSTUG00000038611	cenatac (ENSSTUG00000038625)	GRIK4 (ENSSTUG00000038662) #21	ARHGEF12 (ENSSTUG00000038759)	tlcd5b (ENSSTUG00000039036)	pou2f3 (ENSSTUG00000039049)	OAF (ENSSTUG00000039059)	ENSSTUG00000039098	slc37a2 (ENSSTUG00000039367)	ENSSTUG00000041508	HEPACAM (ENSSTUG00000041533)	ENSSTUG00000041548	ENSSTUG00000041571	tiprl (ENSSTUG00000041580)	riox2 (ENSSTUG00000041613)	TBCEL (ENSSTUG00000041639) #22	TECTA (ENSSTUG00000041688) #23	ENSSTUG00000042512	ENSSTUG00000042599	ENSSTUG00000042615	POLDIP2 (ENSSTUG00000042758)	ENSSTUG00000042909	ywhae2 (ENSSTUG00000042940)	gria4b (ENSSTUG00000043268)	elmod1 (ENSSTUG00000044172)	CUL5 (ENSSTUG00000044214)	CAPN5 (ENSSTUG00000044359)	ompb (ENSSTUG00000044427)	MYO7A (ENSSTUG00000044508)	ENSSTUG00000046332	ENSSTUG00000046345
Huchen	MODERN SPECIES	692								ENSHHUG00000036112	ENSHHUG00000036172	ENSHHUG00000036762	HEPACAM (ENSHHUG00000036771)	ENSHHUG00000036773	ENSHHUG00000036775	tiprl (ENSHHUG00000036787)	riox2 (ENSHHUG00000036795)	TBCEL (ENSHHUG00000036810) #22	TECTA (ENSHHUG00000036814) #23	ENSHHUG00000036825	ENSHHUG00000036842	ENSHHUG00000036846	POLDIP2 (ENSHHUG00000036862)	ENSHHUG00000036885	PRKCB (ENSHHUG00000036892)
Salmoninae	ANCESTRAL SPECIES	348																ENSGT00530000063405.b.f.f #22	ENSGT00950000183155.a.a.a.b.d #23	ENSGT00940000155545.b.e	ENSGT01010000222313.A.b.b.b.a.f	ENSGT00940000154495.a.b.b	ENSGT00820000127055.a.b.a	ENSGT01090000260061.c.b.id.a	ENSGT00940000155677.b.j	ENSGT00940000155677.b.i.b	ENSGT00940000159782.b.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a.b	ENSGT00390000009497.a.d	ENSGT00940000156536.e.a.h	ENSGT00940000155350.h.d	ENSGT00940000156251.b.a
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000156758.w.a.a.a	ENSGT00390000006208.a.j	ENSGT00940000157317.n	ENSGT00940000160014.c	ENSGT00940000162993	ENSGT00940000157662.g.a.a	ENSGT00940000157627.f	ENSGT00390000012008.a.d	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00940000158657.h	ENSGT01100000263551.a.a.d	ENSGT00440000039324.d	ENSGT00390000006659.eb	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00530000063405.b.f.f #22	ENSGT00950000183155.a.a.a.b.d #23	ENSGT00940000155545.b.e	ENSGT01010000222313.A.b.b.b.a.f	ENSGT00940000154495.a.b.b	ENSGT00820000127055.a.b.a	ENSGT01090000260061.c.b.id.a	ENSGT00940000155677.b.i.b	ENSGT00940000159782.b.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a.b	ENSGT00390000009497.a.d	ENSGT00940000156536.e.a.h	ENSGT00940000155350.h.d	ENSGT00940000156251.b.a	ENSGT00530000064411.b.f
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000156758.w.a.a.a	ENSGT00390000006208.a.j	ENSGT00940000157317.n	ENSGT00940000160014.c	ENSGT00940000162993	ENSGT00940000157662.g.a.a	ENSGT00940000157627.f	ENSGT00390000012008.a.d	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00940000158657.h	ENSGT01100000263551.a.a.d	ENSGT00440000039324.d	ENSGT00390000006659.eb	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00530000063405.b.f.f #22	ENSGT00950000183155.a.a.a.b.d #23	ENSGT00940000155545.b.e	ENSGT01010000222313.A.b.b.b.a.f	ENSGT00940000154495.a.b.b	ENSGT00820000127055.a.b.a	ENSGT01090000260061.c.b.id.a	ENSGT00940000155677.b.j	ENSGT00940000155677.b.i.b	ENSGT00940000159782.b.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a.b	ENSGT00390000009497.a.d	ENSGT00940000156536.e.a.h	ENSGT00940000155350.h.d	ENSGT00940000156251.b.a
Oncorhynchus_a	DUPLICATION
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00390000006208.a.j	ENSGT00940000157317.n	ENSGT00940000160014.c	ENSGT01000000222024	ENSGT00940000162993	ENSGT00940000157662.g.a.a	ENSGT00940000157627.f	ENSGT00390000012008.a.d	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00940000158657.h	ENSGT01100000263551.a.a.d	ENSGT00440000039324.d	ENSGT00390000006659.eb	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00530000063405.b.f.f.a #22	ENSGT00950000183155.a.a.a.b.d #23	ENSGT00940000155545.b.e	ENSGT01010000222313.A.b.b.b.a.f	ENSGT00940000154495.a.b.b	ENSGT00820000127055.a.b.a	ENSGT01090000260061.c.b.id.a	ENSGT00940000155677.b.j	ENSGT00940000159782.b.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a.b	ENSGT00390000009497.a.d	ENSGT00940000156536.e.a.h	ENSGT00940000155350.h.d	ENSGT00940000156251.b.a	ENSGT00530000064411.b.f
Chinook salmon	MODERN SPECIES	33	castor2 (ENSOTSG00005030694)	rcc1l (ENSOTSG00005030557)	ncf1 (ENSOTSG00005030531)	ENSOTSG00005030529	foxr1 (ENSOTSG00005030528)	ARHGEF12 (ENSOTSG00005030527)	pou2f3 (ENSOTSG00005030522)	OAF (ENSOTSG00005046494)	ENSOTSG00005046493	slc37a2 (ENSOTSG00005046472)	HEPACAM (ENSOTSG00005046471)	nrgna (ENSOTSG00005046470)	tiprl (ENSOTSG00005046469)	ENSOTSG00005046468	ENSOTSG00005046467	TBCEL (ENSOTSG00005046466) #22	TECTA (ENSOTSG00005046465) #23	USP2 (ENSOTSG00005046429)	ENSOTSG00005046428	ENSOTSG00005046427	ENSOTSG00005046426	ENSOTSG00005046425	gria4b (ENSOTSG00005044976)	slc35f2 (ENSOTSG00005044958)	CUL5 (ENSOTSG00005044924)	ompb (ENSOTSG00005044916)	CAPN5 (ENSOTSG00005044907)	MYO7A (ENSOTSG00005044905)	GDPD4 (ENSOTSG00005044903)	ENSOTSG00005044901	ENSOTSG00005044899
Coho salmon	MODERN SPECIES	26	rcc1l (ENSOKIG00005013411)	ncf1 (ENSOKIG00005013312)	ENSOKIG00005013284	foxr1 (ENSOKIG00005013275)	ENSOKIG00005013271	ARHGEF12 (ENSOKIG00005012991)	pou2f3 (ENSOKIG00005012930)	OAF (ENSOKIG00005012924)	ENSOKIG00005012916	slc37a2 (ENSOKIG00005010987)	HEPACAM (ENSOKIG00005010854)	nrgna (ENSOKIG00005010847)	TIPRL (ENSOKIG00005010840)	ENSOKIG00005010598	ENSOKIG00005010556	TBCEL (ENSOKIG00005010538) #22	TECTA (ENSOKIG00005010404) #23	ENSOKIG00005010092	ENSOKIG00005010018	ENSOKIG00005010006	ENSOKIG00005009997	ENSOKIG00005009989	CRK (ENSOKIG00005009974)	ywhae2 (ENSOKIG00005009953)	gria4b (ENSOKIG00005006992)	elmod1 (ENSOKIG00005006729)	slc35f2 (ENSOKIG00005006717)	CUL5 (ENSOKIG00005006577)	ompb (ENSOKIG00005006540)	CAPN5 (ENSOKIG00005006399)	MYO7A (ENSOKIG00005006047)
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00530000063405.b.f.f.b #22
Chinook salmon	MODERN SPECIES	33	castor2 (ENSOTSG00005014218)	rcc1l (ENSOTSG00005014190)	ncf1 (ENSOTSG00005014179)	ENSOTSG00005014176	foxr1 (ENSOTSG00005014175)	ARHGEF12 (ENSOTSG00005014167)	pou2f3 (ENSOTSG00005014149)	OAF (ENSOTSG00005014146)	ENSOTSG00005014143	slc37a2 (ENSOTSG00005011784)	HEPACAM (ENSOTSG00005011758)	nrgna (ENSOTSG00005011755)	tiprl (ENSOTSG00005011754)	ENSOTSG00005011752	ENSOTSG00005011750	TBCEL (ENSOTSG00005011746) #22	TECTA (ENSOTSG00005011743) #23	USP2 (ENSOTSG00005010605)	ENSOTSG00005010599	ENSOTSG00005010598	CRK (ENSOTSG00005010597)	ENSOTSG00005010596	ENSOTSG00005010595	gria4b (ENSOTSG00005004839)	slc35f2 (ENSOTSG00005004761)	CUL5 (ENSOTSG00005001918)	ompb (ENSOTSG00005001870)	CAPN5 (ENSOTSG00005001813)	MYO7A (ENSOTSG00005001742)	GDPD4 (ENSOTSG00005001724)	ENSOTSG00005001718
Rainbow trout	MODERN SPECIES	3	ENSOMYG00000055909	p47phox (ENSOMYG00000014111)	ENSOMYG00000014057	ARHGEF12 (ENSOMYG00000013938)	pou2f3 (ENSOMYG00000013879)	OAF (ENSOMYG00000013865)	ENSOMYG00000013861	slc37a2 (ENSOMYG00000013693)	ENSOMYG00000013619	ENSOMYG00000071149	ENSOMYG00000052060	ENSOMYG00000069267	ENSOMYG00000013600	ENSOMYG00000050316	ENSOMYG00000013581	ENSOMYG00000013575 #22	ENSOMYG00000013433 #23	ENSOMYG00000013280	ENSOMYG00000013232	ENSOMYG00000013216	ENSOMYG00000013208	ENSOMYG00000013188	ENSOMYG00000066390	ENSOMYG00000013174	gria4b (ENSOMYG00000008434)	elmod1 (ENSOMYG00000002471)	ENSOMYG00000072496	slc35f2 (ENSOMYG00000005785)	ENSOMYG00000005684	ompb (ENSOMYG00000005437)	CAPN5 (ENSOMYG00000005341)
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000156758.w.a.a.a	ENSGT00390000006208.a.j	ENSGT00940000157317.n	ENSGT00940000160014.c	ENSGT00940000162993	ENSGT00940000157662.g.a.a	ENSGT00940000157627.f	ENSGT00390000012008.a.d	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.d.b	ENSGT00940000158657.h	ENSGT01100000263551.a.a.d	ENSGT00440000039324.d	ENSGT00390000006659.eb	ENSGT00950000183127.c.b.d.a.a.b.j	ENSGT00940000161847.b.a.e.a.b.a.a	ENSGT00530000063405.b.f.f #22	ENSGT00950000183155.a.a.a.b.d #23	ENSGT00940000155545.b.e	ENSGT01010000222313.A.b.b.b.a.f	ENSGT00940000154495.a.b.b	ENSGT00820000127055.a.b.a	ENSGT01090000260061.c.b.id.a	ENSGT00940000155677.b.i.b	ENSGT00940000159782.b.b	ENSGT00390000015655.a.m.b	ENSGT00940000156648.c.a.b	ENSGT00940000156536.e.a.h	ENSGT00390000009497.a.d	ENSGT00940000155350.h.d	ENSGT00940000156251.b.a	ENSGT00530000064411.b.f
River trout	MODERN SPECIES	6	castor2 (ENSSTUG00000007893)	rcc1l (ENSSTUG00000007903)	ncf1 (ENSSTUG00000007926)	ENSSTUG00000007942	foxr1 (ENSSTUG00000007945)	ARHGEF12 (ENSSTUG00000007969)	pou2f3 (ENSSTUG00000008413)	OAF (ENSSTUG00000008445)	ENSSTUG00000008452	slc37a2 (ENSSTUG00000008490)	HEPACAM (ENSSTUG00000009770)	nrgna (ENSSTUG00000009773)	tiprl (ENSSTUG00000009775)	ENSSTUG00000009777	ENSSTUG00000009784	TBCEL (ENSSTUG00000009796) #22	TECTA (ENSSTUG00000009831) #23	ENSSTUG00000009880	ENSSTUG00000010056	ENSSTUG00000010061	CRK (ENSSTUG00000010068)	ENSSTUG00000010083	gria4b (ENSSTUG00000010114)	elmod1 (ENSSTUG00000010184)	slc35f2 (ENSSTUG00000010209)	CUL5 (ENSSTUG00000010323)	CAPN5 (ENSSTUG00000011086)	ompb (ENSSTUG00000011199)	ENSSTUG00000011237	ENSSTUG00000011254	ENSSTUG00000011270
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000095704	castor2 (ENSSSAG00000079805)	ENSSSAG00000079823	SPD2A (ENSSSAG00000079828)	ENSSSAG00000085859	ARHGEF12 (ENSSSAG00000079843)	pou2f3 (ENSSSAG00000079857)	OAF (ENSSSAG00000120874)	ENSSSAG00000101698	slc37a2 (ENSSSAG00000079891)	ENSSSAG00000079987	nrgna (ENSSSAG00000079991)	tiprl (ENSSSAG00000079993)	ENSSSAG00000080001	ENSSSAG00000080003	ENSSSAG00000080005 #22	ENSSSAG00000094258 #23	ENSSSAG00000080069	ENSSSAG00000087040	ENSSSAG00000080074	ENSSSAG00000080076	ENSSSAG00000008422	gria4b (ENSSSAG00000104016)	elmod1 (ENSSSAG00000080315)	slc35f2 (ENSSSAG00000080322)	ENSSSAG00000121221	ENSSSAG00000001142	ompb (ENSSSAG00000080367)	MYO7A (ENSSSAG00000080375)	ENSSSAG00000080446	ENSSSAG00000103892
Northern pike	MODERN SPECIES	6	foxr1 (ENSELUG00000000806)	cenatac (ENSELUG00000019020)	GRIK4 (ENSELUG00000018995) #21	ARHGEF12 (ENSELUG00000018877)	tlcd5b (ENSELUG00000001057)	pou2f3 (ENSELUG00000018667)	OAF (ENSELUG00000018647)	slc37a2 (ENSELUG00000018633)	ENSELUG00000018593	HEPACAM (ENSELUG00000018580)	nrgna (ENSELUG00000024670)	tiprl (ENSELUG00000018537)	riox2 (ENSELUG00000000794)	cry5 (ENSELUG00000018508)	foxred1 (ENSELUG00000000789) #12	TBCEL (ENSELUG00000018456) #22	ENSELUG00000000770	TECTA (ENSELUG00000018390) #23	ENSELUG00000018327	ENSELUG00000018288	ENSELUG00000018240	POLDIP2 (ENSELUG00000018214)	CRK (ENSELUG00000018178)	ENSELUG00000018168	gria4b (ENSELUG00000018146)	elmod1 (ENSELUG00000018104)	slc35f2 (ENSELUG00000018044)	CUL5 (ENSELUG00000018014)	ompb (ENSELUG00000017884)	CAPN5 (ENSELUG00000017917)	MYO7A (ENSELUG00000017865)
Reedfish	MODERN SPECIES	17	ENSECRG00000021545 #36	GRAMD1B (ENSECRG00000021564) #36	ENSECRG00000021607	scn3b (ENSECRG00000011308) #37	ENSECRG00000011331	nrgna (ENSECRG00000011349)	hepacama (ENSECRG00000011363)	ENSECRG00000011380	slc37a2 (ENSECRG00000011413)	ENSECRG00000011453	OAF (ENSECRG00000011474)	pou2f3 (ENSECRG00000011483)	tlcd5a (ENSECRG00000011499)	ARHGEF12 (ENSECRG00000011526)	GRIK4 (ENSECRG00000011632) #21	tbcela (ENSECRG00000011665) #22	TECTA (ENSECRG00000011711) #23	ENSECRG00000011954	MFRP (ENSECRG00000011999)	c1qtnf5 (ENSECRG00000012013)	MCAM (ENSECRG00000012045)	CBL (ENSECRG00000012079)	ccdc153 (ENSECRG00000012099)	zgc:194948 (ENSECRG00000012111)	foxr1 (ENSECRG00000012119)	cenatac (ENSECRG00000012134)	rps25 (ENSECRG00000012145)	trappc4 (ENSECRG00000012158)	slc37a4a (ENSECRG00000012179)	hyou1 (ENSECRG00000012208)	vps11 (ENSECRG00000012252)
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1990																ENSCMIG00000003954 #22	TECTA (ENSCMIG00000003937) #23	ENSCMIG00000003927
Elephant shark	MODERN SPECIES	2109															GRIK4 (ENSCMIG00000011147) #21	TBCEL (ENSCMIG00000011263) #22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	1194				ENSEBUG00000003903	ENSEBUG00000001172	ENSEBUG00000016451	ENSEBUG00000003450	rabac1 (ENSEBUG00000002943)	ENSEBUG00000003372	ENSEBUG00000001050	ENSEBUG00000009094	ENSEBUG00000011659	ENSEBUG00000002077	slc37a4a (ENSEBUG00000000540)	trappc4 (ENSEBUG00000006970)	ENSEBUG00000007928 #22	ENSEBUG00000001926 #22	ENSEBUG00000012497	ENSEBUG00000008156	ENSEBUG00000012039	adamts15a (ENSEBUG00000002103)	ENSEBUG00000010695	abcg4b (ENSEBUG00000007353)	ENSEBUG00000015868
Hagfish	MODERN SPECIES	1194									ENSEBUG00000015868	abcg4b (ENSEBUG00000007353)	ENSEBUG00000010695	adamts15a (ENSEBUG00000002103)	ENSEBUG00000012039	ENSEBUG00000008156	ENSEBUG00000012497	ENSEBUG00000001926 #22	ENSEBUG00000007928 #22	trappc4 (ENSEBUG00000006970)	slc37a4a (ENSEBUG00000000540)	ENSEBUG00000002077	ENSEBUG00000011659	ENSEBUG00000009094	ENSEBUG00000001050	ENSEBUG00000003372	rabac1 (ENSEBUG00000002943)	ENSEBUG00000003450	ENSEBUG00000016451	ENSEBUG00000001172	ENSEBUG00000003903
Lamprey	MODERN SPECIES	210											ENSPMAG00000004656	ENSPMAG00000004551	rabac1 (ENSPMAG00000004533)	ENSPMAG00000004520	ENSPMAG00000004517	TBCEL (ENSPMAG00000004504) #22
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00530000063405.b #22
Fruitfly	MODERN SPECIES	17	Obp46a (FBgn0033508)	CG12909 (FBgn0033507)	RNaseZ (FBgn0028426)	CAP (FBgn0033504)	CG12910 (FBgn0033502)	CG12911 (FBgn0033501)	Syb (FBgn0003660)	Csgalnact (FBgn0033500)	CG12914 (FBgn0033499)	CG12209 (FBgn0033498)	Hdc (FBgn0005619)	CG12912 (FBgn0033497)	CG46321 (FBgn0284237)	Hr3 (FBgn0000448)	CG34221 (FBgn0085250)	mlt (FBgn0265512) #22	KCNQ (FBgn0033494)	CG18011 (FBgn0033491)	Or46a (FBgn0026388)	CG12917 (FBgn0033490)	CG46319 (FBgn0284235)	gem (FBgn0050011)	Ccs (FBgn0010531)	dmpd (FBgn0033486)	Pfk (FBgn0003071)	14-3-3zeta (FBgn0004907)	RpLP0-like (FBgn0033485)	Jra (FBgn0001291)	sut4 (FBgn0028560)	CG2269 (FBgn0033484)	egr (FBgn0033483)
Caenorhabditis elegans	MODERN SPECIES	6	vha-12 (WBGene00006921)	F20B6.4 (WBGene00017628)	F20B6.5 (WBGene00017629)	F20B6.6 (WBGene00017630)	F20B6.9 (WBGene00017632)	hpk-1 (WBGene00001994)	F20B6.10 (WBGene00303101)	W01H2.2 (WBGene00020922)	rab-37 (WBGene00004285)	F48D6.4 (WBGene00018602)	hlh-13 (WBGene00001957)	srv-5 (WBGene00005716)	taf-11.1 (WBGene00006393)	srv-6 (WBGene00005717)	C52B9.4 (WBGene00016867)	coel-1 (WBGene00016866) #22	mec-18 (WBGene00003179)	C52B9.10 (WBGene00016869)	twk-28 (WBGene00006680)	ets-9 (WBGene00016865)	C52B9.19 (WBGene00304788)	ets-10 (WBGene00016870)	cka-2 (WBGene00000510)	paf-2 (WBGene00003907)	pqn-15 (WBGene00004106)	C52B9.8 (WBGene00016868)	dop-6 (WBGene00016037)	C24A8.5 (WBGene00016039)	C24A8.6 (WBGene00044004)	cst-2 (WBGene00016038)	cst-1 (WBGene00017472)
Bilateria	ANCESTRAL SPECIES																	ENSGT00530000063405.a ##22
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00530000063405.a ##22
Caenorhabditis elegans	MODERN SPECIES	3	gpx-6 (WBGene00020373)	serp-1.2 (WBGene00020374)	nhr-66 (WBGene00003656)	T09A12.8 (WBGene00235275)	T09A12.1 (WBGene00020372)	K07H8.7 (WBGene00019507)	vit-6 (WBGene00006930)	K07H8.8 (WBGene00019508)	K07H8.5 (WBGene00019506)	K07H8.11 (WBGene00044510)	K07H8.12 (WBGene00044509)	K07H8.9 (WBGene00019509)	nucl-1 (WBGene00019510)	daf-31 (WBGene00000923)	K07H8.2 (WBGene00019504)	tbce-1 (WBGene00019503) ##22	nprl-3 (WBGene00018072)	F35H10.6 (WBGene00018071)	F35H10.5 (WBGene00018070)	vha-5 (WBGene00006914)	F35H10.10 (WBGene00018073)	F35H10.3 (WBGene00018069)	F35H10.2 (WBGene00018068)	his-29 (WBGene00001903)	his-30 (WBGene00001904)	lys-10 (WBGene00003099)	his-31 (WBGene00001905)	his-32 (WBGene00001906)	his-33 (WBGene00001907)	his-34 (WBGene00001908)	lgc-6 (WBGene00017544)
Fruitfly	MODERN SPECIES	17	Tsp42A (FBgn0033042)	Or42b (FBgn0033043)	dpr12 (FBgn0085414)	CG44438 (FBgn0265631)	CG43366 (FBgn0263109)	CG7882 (FBgn0033047)	CG7881 (FBgn0033048)	BubR1 (FBgn0263855)	mle (FBgn0002774)	Src42A (FBgn0264959)	Act42A (FBgn0000043)	Pngl (FBgn0033050)	Strica (FBgn0033051)	SCAP (FBgn0033052)	CG14591 (FBgn0033054)	Tbce (FBgn0033055) ##22	CG34211 (FBgn0085240)	CG34212 (FBgn0085241)	CCHa2-R (FBgn0033058)	CG7856 (FBgn0033056)	l(2)k09848 (FBgn0284246)	CG7849 (FBgn0033060)	SmydA-5 (FBgn0033061)	Ars2 (FBgn0033062)	EcR (FBgn0000546)	CG14589 (FBgn0033063)	Cyp6w1 (FBgn0033065)	CG8343 (FBgn0040502)	CG11211 (FBgn0033067)	Ptr (FBgn0262867)	CG30432 (FBgn0050432)
Chordata	ANCESTRAL SPECIES																	ENSGT00530000063405.a ##22
Vertebrata	ANCESTRAL SPECIES	128															ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562
Cyclostomata	ANCESTRAL SPECIES	134															ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562
Lamprey	MODERN SPECIES	177										ENSPMAG00000005774	ENSPMAG00000005768	ENSPMAG00000005758	frmd6 (ENSPMAG00000005743)	ENSPMAG00000005734	ggps1 (ENSPMAG00000005721)	ENSPMAG00000005672 ##22
Hagfish	MODERN SPECIES	544														GGPS1 (ENSEBUG00000008841)	ENSEBUG00000003395	ENSEBUG00000003674 ##22	ENSEBUG00000012199	ENSEBUG00000011152	ENSEBUG00000004020	ENSEBUG00000007091	pex13 (ENSEBUG00000013554)	ENSEBUG00000002278	ENSEBUG00000012605	smndc1 (ENSEBUG00000010929)	ENSEBUG00000011413	ENSEBUG00000006248	ENSEBUG00000008222	ENSEBUG00000002308	ENSEBUG00000013904	ENSEBUG00000005824	ENSEBUG00000009320
Gnathostomata	ANCESTRAL SPECIES	205											ENSGT00940000160591	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A
Elephant shark	MODERN SPECIES	1516												irf2bp2b (ENSCMIG00000011395)	tomm20a (ENSCMIG00000011415)	ENSCMIG00000011426	ARID4B (ENSCMIG00000011435)	TBCE (ENSCMIG00000011456) ##22	B3GALNT2 (ENSCMIG00000011473)	GNG4 (ENSCMIG00000011498)	LYST (ENSCMIG00000011524)	NID1 (ENSCMIG00000011608)	gpr137ba (ENSCMIG00000011656)	ero1b (ENSCMIG00000011670)	egln1b (ENSCMIG00000011688)	tsnax (ENSCMIG00000011690)	snx14 (ENSCMIG00000011850)	syncrip (ENSCMIG00000012335)	cga (ENSCMIG00000012408)	HTR1E (ENSCMIG00000012414)	ZNF292 (ENSCMIG00000012418)	DOP1A (ENSCMIG00000012448)	pgm3 (ENSCMIG00000012482)
Euteleostomi	ANCESTRAL SPECIES	174											ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371
Sarcopterygii	ANCESTRAL SPECIES	118											ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a
Coelacanth	MODERN SPECIES	382		TAB2 (ENSLACG00000016935)	ENSLACG00000016816	PPIL4 (ENSLACG00000016551)	tfb2m (ENSLACG00000016461)	EXOC8 (ENSLACG00000016425)	GNPAT (ENSLACG00000016223)	C1orf131 (ENSLACG00000016190)	ARV1 (ENSLACG00000016152)	TTC13 (ENSLACG00000015671)	TBXT (ENSLACG00000015449)	TOMM20 (ENSLACG00000014544)	NUP133 (ENSLACG00000013878)	RBM34 (ENSLACG00000013628)	B3GALNT2 (ENSLACG00000013209)	TBCE (ENSLACG00000012659) ##22	GGPS1 (ENSLACG00000012397)	ENSLACG00000022642	SLC30A6 (ENSLACG00000010855)	ENSLACG00000009811	MRPL4 (ENSLACG00000009255)	ENSLACG00000022552 #20	GPATCH11 (ENSLACG00000008344)	ENSLACG00000006227	PDCD2 (ENSLACG00000005872)	TBP (ENSLACG00000005118)	CEP43 (ENSLACG00000001390)
Tetrapoda	ANCESTRAL SPECIES	135	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT01050000247759	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a
Anura	DUPLICATION
Anura	ANCESTRAL SPECIES	206						ENSGT00940000155704	ENSGT00390000003585.p	ENSGT00390000015936	ENSGT00390000008459	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00940000158149	ENSGT00530000063405.a.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000160084	ENSGT00940000161899
Frog	MODERN SPECIES	5	tbxt (ENSXETG00000026572)	PRR18 (ENSXETG00000037784)	sft2d1 (ENSXETG00000026578)	ENSXETG00000036896	mpc1 (ENSXETG00000025990)	trim50 (ENSXETG00000041526)	rps6ka2 (ENSXETG00000025994)	cebpz (ENSXETG00000000654)	ndufaf7 (ENSXETG00000000653)	mocs3 (ENSXETG00000024648)	qpct (ENSXETG00000013098)	irf2bp2 (ENSXETG00000024649)	tomm20 (ENSXETG00000024650)	arid4b (ENSXETG00000024651)	ggps1 (ENSXETG00000013068)	tbce (ENSXETG00000013067) ##22	b3galnt2 (ENSXETG00000013065)	gng4 (ENSXETG00000041830)	lyst (ENSXETG00000013058)	chrm3 (ENSXETG00000016229)	fmn2 (ENSXETG00000016228)	kmo (ENSXETG00000016227)	coa6 (ENSXETG00000016226)	ENSXETG00000044965	tarbp1 (ENSXETG00000016224)	ENSXETG00000044188	ero1b (ENSXETG00000016223)	gpr137b (ENSXETG00000016222)	nid1 (ENSXETG00000016220)	ENSXETG00000043277	rnaset2 (ENSXETG00000048600)
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000009600	EXOC8 (ENSLLEG00000009559)	ENSLLEG00000009542	ENSLLEG00000009514	ENSLLEG00000009482	SIPA1L2 (ENSLLEG00000008383)	ENSLLEG00000008267	NTPCR (ENSLLEG00000008159)	ENSLLEG00000008143	ENSLLEG00000008125	ENSLLEG00000008047	ENSLLEG00000007779	KCNK1 (ENSLLEG00000007725)	ENSLLEG00000007711	ENSLLEG00000007691	TBCE (ENSLLEG00000007632) ##22	B3GALNT2 (ENSLLEG00000007354)	GNG4 (ENSLLEG00000007174)	ENSLLEG00000007161	ENSLLEG00000007149	LYST (ENSLLEG00000005779)	ENSLLEG00000005618	ENSLLEG00000005580	ENSLLEG00000005563	ENSLLEG00000012359	ENSLLEG00000012341	ENSLLEG00000012321	ENSLLEG00000012295	CHRM3 (ENSLLEG00000012276)	ENSLLEG00000012257	ENSLLEG00000012236
Anura	ANCESTRAL SPECIES																	ENSGT00530000063405.a.b ##22
Leishan spiny toad	MODERN SPECIES	70																ENSLLEG00000025456 ##22	ENSLLEG00000025445
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899
Sauria	ANCESTRAL SPECIES	1	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Archosauria	ANCESTRAL SPECIES	3	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Aves	ANCESTRAL SPECIES	12	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Neognathae	ANCESTRAL SPECIES	2	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Great tit	MODERN SPECIES	22	ENSPMJG00000003518	ENSPMJG00000003858	MAP10 (ENSPMJG00000003865)	NTPCR (ENSPMJG00000003873)	PCNX2 (ENSPMJG00000003881)	MAP3K21 (ENSPMJG00000003886)	KCNK1 (ENSPMJG00000003889)	SLC35F3 (ENSPMJG00000003893)	COA6 (ENSPMJG00000003898)	TARBP1 (ENSPMJG00000003899)	IRF2BP2 (ENSPMJG00000003902)	TOMM20 (ENSPMJG00000003906)	RBM34 (ENSPMJG00000003908)	ARID4B (ENSPMJG00000003910)	GGPS1 (ENSPMJG00000003950)	TBCE (ENSPMJG00000003916) ##22	B3GALNT2 (ENSPMJG00000003951)	ENSPMJG00000004022	LYST (ENSPMJG00000004023)	NID1 (ENSPMJG00000004074)	GPR137B (ENSPMJG00000004091)	ERO1B (ENSPMJG00000004102)	ENSPMJG00000004133	LGALS8 (ENSPMJG00000004138)	HEATR1 (ENSPMJG00000004139)	ACTN2 (ENSPMJG00000004157)	MTR (ENSPMJG00000004189)	RYR2 (ENSPMJG00000004243)	CHRM3 (ENSPMJG00000007288)	FMN2 (ENSPMJG00000007289)	GREM2 (ENSPMJG00000007291)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Passeroidea	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Common canary	MODERN SPECIES	20	DISC1 (ENSSCAG00000003630)	SIPA1L2 (ENSSCAG00000003667)	MAP10 (ENSSCAG00000003678)	NTPCR (ENSSCAG00000003693)	PCNX2 (ENSSCAG00000003705)	MAP3K21 (ENSSCAG00000003740)	KCNK1 (ENSSCAG00000003747)	SLC35F3 (ENSSCAG00000003756)	COA6 (ENSSCAG00000003759)	TARBP1 (ENSSCAG00000003773)	IRF2BP2 (ENSSCAG00000003872)	TOMM20 (ENSSCAG00000003878)	RBM34 (ENSSCAG00000003889)	ARID4B (ENSSCAG00000003968)	GGPS1 (ENSSCAG00000004219)	TBCE (ENSSCAG00000004222) ##22	B3GALNT2 (ENSSCAG00000004237)	GNG4 (ENSSCAG00000004264)	LYST (ENSSCAG00000004276)	NID1 (ENSSCAG00000004302)	GPR137B (ENSSCAG00000004324)	ERO1B (ENSSCAG00000004332)	ENSSCAG00000004341	LGALS8 (ENSSCAG00000004346)	HEATR1 (ENSSCAG00000004353)	ACTN2 (ENSSCAG00000004367)	MTR (ENSSCAG00000004458)	RYR2 (ENSSCAG00000005420)	CHRM3 (ENSSCAG00000007978)	FMN2 (ENSSCAG00000007986)	GREM2 (ENSSCAG00000007994)
Zebra finch	MODERN SPECIES	23	DISC1 (ENSTGUG00000010096)	SIPA1L2 (ENSTGUG00000010103)	ENSTGUG00000010135	NTPCR (ENSTGUG00000010136)	PCNX2 (ENSTGUG00000010143)	MAP3K21 (ENSTGUG00000010194)	KCNK1 (ENSTGUG00000010202)	SLC35F3 (ENSTGUG00000010208)	COA6 (ENSTGUG00000026578)	TARBP1 (ENSTGUG00000010214)	IRF2BP2 (ENSTGUG00000010224)	TOMM20 (ENSTGUG00000026446)	RBM34 (ENSTGUG00000010234)	ARID4B (ENSTGUG00000010246)	GGPS1 (ENSTGUG00000025259)	TBCE (ENSTGUG00000010264) ##22	B3GALNT2 (ENSTGUG00000010280)	GNG4 (ENSTGUG00000010286)	LYST (ENSTGUG00000010290)	NID1 (ENSTGUG00000010336)	GPR137B (ENSTGUG00000010376)	ERO1B (ENSTGUG00000010384)	ENSTGUG00000021438	LGALS8 (ENSTGUG00000010394)	HEATR1 (ENSTGUG00000010404)	ACTN2 (ENSTGUG00000010436)	MTR (ENSTGUG00000010458)	RYR2 (ENSTGUG00000010491)	CHRM3 (ENSTGUG00000010589)	ENSTGUG00000010591	GREM2 (ENSTGUG00000019112)
Medium ground finch	MODERN SPECIES	51	SPRTN (ENSGFOG00000011460)	EGLN1 (ENSGFOG00000011451)	TSNAX (ENSGFOG00000011436)	DISC1 (ENSGFOG00000011410)	SIPA1L2 (ENSGFOG00000011366)	NTPCR (ENSGFOG00000011349)	PCNX2 (ENSGFOG00000011341)	MAP3K21 (ENSGFOG00000011328)	KCNK1 (ENSGFOG00000011323)	SLC35F3 (ENSGFOG00000011318)	TARBP1 (ENSGFOG00000011301)	TOMM20 (ENSGFOG00000010854)	RBM34 (ENSGFOG00000010841)	ARID4B (ENSGFOG00000010196)	GGPS1 (ENSGFOG00000010159)	TBCE (ENSGFOG00000009895) ##22	B3GALNT2 (ENSGFOG00000009794)	GNG4 (ENSGFOG00000009777)	LYST (ENSGFOG00000007533)	NID1 (ENSGFOG00000007426)	ENSGFOG00000007419	GPR137B (ENSGFOG00000007410)	ERO1B (ENSGFOG00000007396)	ENSGFOG00000007379	LGALS8 (ENSGFOG00000007364)	HEATR1 (ENSGFOG00000011933)	ACTN2 (ENSGFOG00000011917)	MTR (ENSGFOG00000011885)	RYR2 (ENSGFOG00000011813)	CHRM3 (ENSGFOG00000011798)	FMN2 (ENSGFOG00000011763)
Flycatcher	MODERN SPECIES	21	SPRTN (ENSFALG00000027582)	ENSFALG00000028954	ENSFALG00000027867	TSNAX (ENSFALG00000003260)	SIPA1L2 (ENSFALG00000013610)	NTPCR (ENSFALG00000013600)	PCNX2 (ENSFALG00000013592)	MAP3K21 (ENSFALG00000013580)	KCNK1 (ENSFALG00000026548)	SLC35F3 (ENSFALG00000013573)	COA6 (ENSFALG00000013571)	TARBP1 (ENSFALG00000013565)	TOMM20 (ENSFALG00000013558)	ARID4B (ENSFALG00000013548)	GGPS1 (ENSFALG00000013542)	TBCE (ENSFALG00000013532) ##22	B3GALNT2 (ENSFALG00000013515)	GNG4 (ENSFALG00000026090)	LYST (ENSFALG00000013506)	NID1 (ENSFALG00000013502)	GPR137B (ENSFALG00000013498)	ERO1B (ENSFALG00000013496)	ENSFALG00000027378	LGALS8 (ENSFALG00000013486)	HEATR1 (ENSFALG00000013475)	ACTN2 (ENSFALG00000013451)	MTR (ENSFALG00000013431)	RYR2 (ENSFALG00000013270)	CHRM3 (ENSFALG00000015095)	ENSFALG00000013181	GREM2 (ENSFALG00000015079)
Neognathae_c	ANCESTRAL SPECIES	5	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000170414	ENSGT00940000161899
Kakapo	MODERN SPECIES	2	ENSSHBG00005006797	DISC1 (ENSSHBG00005006871)	SIPA1L2 (ENSSHBG00005007385)	NTPCR (ENSSHBG00005007407)	PCNX2 (ENSSHBG00005007450)	MAP3K21 (ENSSHBG00005007488)	KCNK1 (ENSSHBG00005007540)	SLC35F3 (ENSSHBG00005007559)	COA6 (ENSSHBG00005007573)	TARBP1 (ENSSHBG00005007665)	IRF2BP2 (ENSSHBG00005007968)	TOMM20 (ENSSHBG00005007978)	RBM34 (ENSSHBG00005007994)	ARID4B (ENSSHBG00005008127)	GGPS1 (ENSSHBG00005009364)	TBCE (ENSSHBG00005009371) ##22	B3GALNT2 (ENSSHBG00005009394)	GNG4 (ENSSHBG00005009423)	LYST (ENSSHBG00005009666)	NID1 (ENSSHBG00005010022)	GPR137B (ENSSHBG00005010055)	ERO1B (ENSSHBG00005010097)	LGALS8 (ENSSHBG00005010132)	HEATR1 (ENSSHBG00005010352)	ACTN2 (ENSSHBG00005010917)	MTR (ENSSHBG00005011060)	RYR2 (ENSSHBG00005014250)	FMN2 (ENSSHBG00005021049)	GREM2 (ENSSHBG00005021059)	RGS7 (ENSSHBG00005021061)	PIGM (ENSSHBG00005021062)
Golden eagle	MODERN SPECIES	4	ENSACCG00020004877	DISC1 (ENSACCG00020004864)	SIPA1L2 (ENSACCG00020004833)	NTPCR (ENSACCG00020004792)	PCNX2 (ENSACCG00020004718)	MAP3K21 (ENSACCG00020004650)	KCNK1 (ENSACCG00020004633)	SLC35F3 (ENSACCG00020004624)	COA6 (ENSACCG00020015499)	TARBP1 (ENSACCG00020015408)	IRF2BP2 (ENSACCG00020015284)	TOMM20 (ENSACCG00020015265)	RBM34 (ENSACCG00020015246)	ARID4B (ENSACCG00020015219)	GGPS1 (ENSACCG00020015205)	TBCE (ENSACCG00020015180) ##22	B3GALNT2 (ENSACCG00020015156)	GNG4 (ENSACCG00020015140)	LYST (ENSACCG00020013785)	NID1 (ENSACCG00020011960)	GPR137B (ENSACCG00020011860)	ERO1B (ENSACCG00020011828)	ENSACCG00020011790	LGALS8 (ENSACCG00020011738)	HEATR1 (ENSACCG00020011571)	ACTN2 (ENSACCG00020011468)	MTR (ENSACCG00020011388)	RYR2 (ENSACCG00020010478)	CHRM3 (ENSACCG00020009211)	ENSACCG00020009194	GREM2 (ENSACCG00020009170)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Anatidae	ANCESTRAL SPECIES	11	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Pink-footed goose	MODERN SPECIES	53	EGLN1 (ENSABRG00000001777)	TSNAX (ENSABRG00000001807)	DISC1 (ENSABRG00000001859)	SIPA1L2 (ENSABRG00000002092)	NTPCR (ENSABRG00000002177)	PCNX2 (ENSABRG00000002223)	MAP3K21 (ENSABRG00000002442)	KCNK1 (ENSABRG00000002492)	SLC35F3 (ENSABRG00000002516)	COA6 (ENSABRG00000002551)	TARBP1 (ENSABRG00000002605)	IRF2BP2 (ENSABRG00000003025)	TOMM20 (ENSABRG00000003041)	ARID4B (ENSABRG00000003096)	GGPS1 (ENSABRG00000003887)	TBCE (ENSABRG00000004101) ##22	B3GALNT2 (ENSABRG00000005698)	GNG4 (ENSABRG00000005763)	LYST (ENSABRG00000006032)	NID1 (ENSABRG00000012425)	GPR137B (ENSABRG00000012967)	ERO1B (ENSABRG00000012980)	ENSABRG00000013019	LGALS8 (ENSABRG00000013037)	HEATR1 (ENSABRG00000013178)	ACTN2 (ENSABRG00000014949)	MTR (ENSABRG00000017015)	RYR2 (ENSABRG00000018175)	ENSABRG00000021171	ENSABRG00000021176	CHRM3 (ENSABRG00000021192)
Duck	MODERN SPECIES	21	ENSAPLG00000007210	KCNH1 (ENSAPLG00000007453)	ENSAPLG00000029050	ENSAPLG00000007807	SERTAD4 (ENSAPLG00000020952)	SYT14 (ENSAPLG00000007935)	UTP25 (ENSAPLG00000007948)	KCNK1 (ENSAPLG00000008119)	SLC35F3 (ENSAPLG00000008027)	COA6 (ENSAPLG00000022615)	TARBP1 (ENSAPLG00000007666)	TOMM20 (ENSAPLG00000004030)	RBM34 (ENSAPLG00000004344)	ARID4B (ENSAPLG00000004422)	GGPS1 (ENSAPLG00000005831)	TBCE (ENSAPLG00000005834) ##22	B3GALNT2 (ENSAPLG00000006156)	GNG4 (ENSAPLG00000006331)	ENSAPLG00000006342	NID1 (ENSAPLG00000007233)	GPR137B (ENSAPLG00000008345)	ERO1B (ENSAPLG00000008526)	RHOU (ENSAPLG00000028150)	EXOC8 (ENSAPLG00000030708)	SPRTN (ENSAPLG00000013330)	ENSAPLG00000013374	TSNAX (ENSAPLG00000013433)	DISC1 (ENSAPLG00000024768)	SIPA1L2 (ENSAPLG00000013477)	ENSAPLG00000024429	NTPCR (ENSAPLG00000008470)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b
Japanese quail	MODERN SPECIES	21	DISC1 (ENSCJPG00005003822)	SIPA1L2 (ENSCJPG00005003795)	MAP10 (ENSCJPG00005003783)	NTPCR (ENSCJPG00005003781)	PCNX2 (ENSCJPG00005003548)	MAP3K21 (ENSCJPG00005003539)	KCNK1 (ENSCJPG00005003530)	SLC35F3 (ENSCJPG00005003529)	COA6 (ENSCJPG00005003528)	TARBP1 (ENSCJPG00005003419)	IRF2BP2 (ENSCJPG00005003413)	TOMM20 (ENSCJPG00005003411)	RBM34 (ENSCJPG00005003409)	ARID4B (ENSCJPG00005001975)	GGPS1 (ENSCJPG00005001848)	TBCE (ENSCJPG00005001493) ##22	B3GALNT2 (ENSCJPG00005000792)	GNG4 (ENSCJPG00005000781)	LYST (ENSCJPG00005019957)	NID1 (ENSCJPG00005019952)	GPR137B (ENSCJPG00005019951)	ERO1B (ENSCJPG00005019930)	ENSCJPG00005019928	LGALS8 (ENSCJPG00005019927)	HEATR1 (ENSCJPG00005019750)	ACTN2 (ENSCJPG00005017895)	MTR (ENSCJPG00005016942)	RYR2 (ENSCJPG00005013886)	CHRM3 (ENSCJPG00005013867)	ENSCJPG00005013865	GREM2 (ENSCJPG00005013864)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b
Chicken	MODERN SPECIES	22	DISC1 (ENSGALG00010008181)	MAP10 (ENSGALG00010008155)	SIPA1L2 (ENSGALG00010008151)	NTPCR (ENSGALG00010008144)	PCNX2 (ENSGALG00010008066)	MAP3K21 (ENSGALG00010008031)	KCNK7 (ENSGALG00010008028)	SLC35F3 (ENSGALG00010008022)	COA6 (ENSGALG00010008020)	TARBP1 (ENSGALG00010007988)	IRF2BP2 (ENSGALG00010010100)	TOMM20 (ENSGALG00010009508)	RBM34 (ENSGALG00010009491)	ARID4B (ENSGALG00010009482)	GGPS1 (ENSGALG00010009465)	TBCE (ENSGALG00010009452) ##22	B3GALNT2 (ENSGALG00010009439)	GNG4 (ENSGALG00010009404)	LYST (ENSGALG00010009357)	NID1 (ENSGALG00010009327)	GPR137B (ENSGALG00010009289)	ERO1B (ENSGALG00010009250)	EDARADD (ENSGALG00010009193)	LGALS8 (ENSGALG00010009142)	HEATR1 (ENSGALG00010009130)	ACTN2 (ENSGALG00010009118)	MTR (ENSGALG00010009104)	RYR2 (ENSGALG00010009054)	CHRM3 (ENSGALG00010008996)	FMN2 (ENSGALG00010008880)	GREM2 (ENSGALG00010008824)
Turkey	MODERN SPECIES	11	EGLN1 (ENSMGAG00000011991)	TSNAX (ENSMGAG00000011981)	DISC1 (ENSMGAG00000018790)	SIPA1L2 (ENSMGAG00000011963)	ENSMGAG00000020637	NTPCR (ENSMGAG00000011957)	PCNX2 (ENSMGAG00000011951)	MAP3K21 (ENSMGAG00000011945)	KCNK1 (ENSMGAG00000016385)	SLC35F3 (ENSMGAG00000011940)	COA6 (ENSMGAG00000019402)	TARBP1 (ENSMGAG00000011933)	RBM34 (ENSMGAG00000011921)	ARID4B (ENSMGAG00000011896)	GGPS1 (ENSMGAG00000011893)	TBCE (ENSMGAG00000011890) ##22	B3GALNT2 (ENSMGAG00000011880)	GNG4 (ENSMGAG00000011879)	LYST (ENSMGAG00000011854)	NID1 (ENSMGAG00000011823)	GPR137B (ENSMGAG00000011817)	ERO1B (ENSMGAG00000011803)	ENSMGAG00000011809	LGALS8 (ENSMGAG00000011791)	HEATR1 (ENSMGAG00000011761)	ACTN2 (ENSMGAG00000011723)	MTR (ENSMGAG00000011700)	ENSMGAG00000010483	ENSMGAG00000010499	ENSMGAG00000010503	ENSMGAG00000010506
African ostrich	MODERN SPECIES	188	EGLN1 (ENSSCUG00000000408)	TSNAX (ENSSCUG00000000411)	DISC1 (ENSSCUG00000000420)	SIPA1L2 (ENSSCUG00000000437)	NTPCR (ENSSCUG00000000457)	PCNX2 (ENSSCUG00000000462)	MAP3K21 (ENSSCUG00000000474)	KCNK1 (ENSSCUG00000000475)	SLC35F3 (ENSSCUG00000000476)	COA6 (ENSSCUG00000000479)	TARBP1 (ENSSCUG00000000505)	TOMM20 (ENSSCUG00000000546)	RBM34 (ENSSCUG00000000551)	ARID4B (ENSSCUG00000000590)	GGPS1 (ENSSCUG00000000626)	TBCE (ENSSCUG00000000653) ##22	B3GALNT2 (ENSSCUG00000000694)	GNG4 (ENSSCUG00000000697)	LYST (ENSSCUG00000000828)	CCR6 (ENSSCUG00000001009)	CEP43 (ENSSCUG00000001013)	RNASET2 (ENSSCUG00000001018)	RPS6KA2 (ENSSCUG00000001026)	MPC1 (ENSSCUG00000001035)	SFT2D1 (ENSSCUG00000001038)	TBXT (ENSSCUG00000001044)	PDE10A (ENSSCUG00000001053)	QKI (ENSSCUG00000001069)
Australian saltwater crocodile	MODERN SPECIES	60	TSNAX (ENSCPRG00005017146)	DISC1 (ENSCPRG00005017142)	SIPA1L2 (ENSCPRG00005017128)	NTPCR (ENSCPRG00005017117)	PCNX2 (ENSCPRG00005017110)	MAP3K21 (ENSCPRG00005017084)	KCNK1 (ENSCPRG00005017071)	SLC35F3 (ENSCPRG00005017065)	COA6 (ENSCPRG00005017064)	TARBP1 (ENSCPRG00005016928)	IRF2BP2 (ENSCPRG00005016875)	TOMM20 (ENSCPRG00005016863)	RBM34 (ENSCPRG00005016854)	ARID4B (ENSCPRG00005016688)	GGPS1 (ENSCPRG00005016645)	TBCE (ENSCPRG00005016636) ##22	B3GALNT2 (ENSCPRG00005016622)	GNG4 (ENSCPRG00005016615)	LYST (ENSCPRG00005016600)	NID1 (ENSCPRG00005016572)	GPR137B (ENSCPRG00005016563)	ERO1B (ENSCPRG00005016557)	ENSCPRG00005016553	LGALS8 (ENSCPRG00005016548)	HEATR1 (ENSCPRG00005016531)	ACTN2 (ENSCPRG00005016507)	MTR (ENSCPRG00005016487)	RYR2 (ENSCPRG00005014790)	CHRM3 (ENSCPRG00005014581)	ENSCPRG00005014577	ENSCPRG00005014566
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT01030000235112
Testudinoidea	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT01030000235112	ENSGT00940000161899
Emydidae	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00990000214031	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Three-toed box turtle	MODERN SPECIES	31	SIPA1L2 (ENSTMTG00000020821)	MAP10 (ENSTMTG00000020808)	NTPCR (ENSTMTG00000020796)	PCNX2 (ENSTMTG00000020707)	MAP3K21 (ENSTMTG00000020688)	KCNK1 (ENSTMTG00000020682)	ENSTMTG00000020670	SLC35F3 (ENSTMTG00000020642)	COA6 (ENSTMTG00000020637)	TARBP1 (ENSTMTG00000020306)	IRF2BP2 (ENSTMTG00000020262)	TOMM20 (ENSTMTG00000020250)	RBM34 (ENSTMTG00000020240)	ARID4B (ENSTMTG00000020065)	GGPS1 (ENSTMTG00000020032)	TBCE (ENSTMTG00000020012) ##22	B3GALNT2 (ENSTMTG00000019998)	GNG4 (ENSTMTG00000019992)	LYST (ENSTMTG00000012250)	NID1 (ENSTMTG00000011531)	GPR137B (ENSTMTG00000011516)	ERO1B (ENSTMTG00000011500)	ENSTMTG00000011483	LGALS8 (ENSTMTG00000011456)	HEATR1 (ENSTMTG00000011387)	ACTN2 (ENSTMTG00000011097)	MTR (ENSTMTG00000010954)	RYR2 (ENSTMTG00000009970)	CHRM3 (ENSTMTG00000009823)	FMN2 (ENSTMTG00000009751)	GREM2 (ENSTMTG00000009736)
painted turtle	MODERN SPECIES	726	SIPA1L2 (ENSCPBG00000006006)	MAP10 (ENSCPBG00000005985)	NTPCR (ENSCPBG00000005967)	PCNX2 (ENSCPBG00000005879)	MAP3K21 (ENSCPBG00000005841)	KCNK1 (ENSCPBG00000005827)	ENSCPBG00000005823	SLC35F3 (ENSCPBG00000005814)	TARBP1 (ENSCPBG00000005587)	IRF2BP2 (ENSCPBG00000005509)	TOMM20 (ENSCPBG00000005466)	RBM34 (ENSCPBG00000005460)	ENSCPBG00000005451	ARID4B (ENSCPBG00000004501)	GGPS1 (ENSCPBG00000004372)	TBCE (ENSCPBG00000004350) ##22	B3GALNT2 (ENSCPBG00000004334)	GNG4 (ENSCPBG00000004317)	LYST (ENSCPBG00000004289)	NID1 (ENSCPBG00000004266)	GPR137B (ENSCPBG00000004258)	ERO1B (ENSCPBG00000004249)	ENSCPBG00000004246	LGALS8 (ENSCPBG00000004235)	HEATR1 (ENSCPBG00000004198)	ACTN2 (ENSCPBG00000004168)	MTR (ENSCPBG00000004126)	RYR2 (ENSCPBG00000002498)
Testudinidae	ANCESTRAL SPECIES	6	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT01050000246680	ENSGT00940000160084	ENSGT01030000235112
Abingdon island giant tortoise	MODERN SPECIES	926															GGPS1 (ENSCABG00000022167)	TBCE (ENSCABG00000022168) ##22	B3GALNT2 (ENSCABG00000022173)
Goode s thornscrub tortoise	MODERN SPECIES	17	DISC1 (ENSGEVG00005016505)	SIPA1L2 (ENSGEVG00005017196)	MAP10 (ENSGEVG00005017479)	NTPCR (ENSGEVG00005017516)	PCNX2 (ENSGEVG00005017555)	MAP3K21 (ENSGEVG00005017703)	KCNK1 (ENSGEVG00005017722)	SLC35F3 (ENSGEVG00005017748)	COA6 (ENSGEVG00005017812)	TARBP1 (ENSGEVG00005017990)	IRF2BP2 (ENSGEVG00005018539)	TOMM20 (ENSGEVG00005018563)	RBM34 (ENSGEVG00005018583)	ARID4B (ENSGEVG00005018611)	GGPS1 (ENSGEVG00005018745)	TBCE (ENSGEVG00005018765) ##22	B3GALNT2 (ENSGEVG00005018885)	GNG4 (ENSGEVG00005018905)	LYST (ENSGEVG00005019117)	ENSGEVG00005019463	GPR137B (ENSGEVG00005019473)	ERO1B (ENSGEVG00005019484)	ENSGEVG00005019497	LGALS8 (ENSGEVG00005019505)	HEATR1 (ENSGEVG00005019521)	ACTN2 (ENSGEVG00005019618)	MTR (ENSGEVG00005005768)	RYR2 (ENSGEVG00005006066)	ENSGEVG00005006736	CHRM3 (ENSGEVG00005006759)	ENSGEVG00005006792
Chinese turtle	MODERN SPECIES	1009	SIPA1L2 (ENSPSIG00000005490)	MAP10 (ENSPSIG00000008027)	NTPCR (ENSPSIG00000008305)	ENSPSIG00000008705	ENSPSIG00000009107	MAP3K21 (ENSPSIG00000009569)	KCNK1 (ENSPSIG00000009835)	SLC35F3 (ENSPSIG00000010402)	COA6 (ENSPSIG00000010683)	TARBP1 (ENSPSIG00000010699)	IRF2BP2 (ENSPSIG00000011030)	TOMM20 (ENSPSIG00000011035)	RBM34 (ENSPSIG00000011370)	ARID4B (ENSPSIG00000011632)	GGPS1 (ENSPSIG00000012463)	TBCE (ENSPSIG00000012492) ##22	B3GALNT2 (ENSPSIG00000012953)	GNG4 (ENSPSIG00000013489)	LYST (ENSPSIG00000013825)	NID1 (ENSPSIG00000006311)	GPR137B (ENSPSIG00000007819)	ERO1B (ENSPSIG00000007860)	ENSPSIG00000008940	LGALS8 (ENSPSIG00000009463)	HEATR1 (ENSPSIG00000010048)	ACTN2 (ENSPSIG00000011905)
Lepidosauria	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Episquamata	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Laterata	ANCESTRAL SPECIES	4	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Argentine black and white tegu	MODERN SPECIES	2	SIPA1L2 (ENSSMRG00000022009)	MAP10 (ENSSMRG00000022006)	NTPCR (ENSSMRG00000022005)	PCNX2 (ENSSMRG00000022003)	MAP3K21 (ENSSMRG00000022002)	KCNK1 (ENSSMRG00000022001)	SLC35F3 (ENSSMRG00000021999)	COA6 (ENSSMRG00000021998)	TARBP1 (ENSSMRG00000021996)	ENSSMRG00000021994	IRF2BP2 (ENSSMRG00000021993)	TOMM20 (ENSSMRG00000021986)	RBM34 (ENSSMRG00000021985)	ARID4B (ENSSMRG00000021881)	GGPS1 (ENSSMRG00000021880)	TBCE (ENSSMRG00000021879) ##22	B3GALNT2 (ENSSMRG00000021878)	GNG4 (ENSSMRG00000021877)	LYST (ENSSMRG00000021876)	NID1 (ENSSMRG00000021875)	GPR137B (ENSSMRG00000021874)	ERO1B (ENSSMRG00000021873)	ENSSMRG00000021872	LGALS8 (ENSSMRG00000021871)	HEATR1 (ENSSMRG00000021870)	ACTN2 (ENSSMRG00000021869)	MTR (ENSSMRG00000021868)	RYR2 (ENSSMRG00000010394)	ENSSMRG00000010277	CHRM3 (ENSSMRG00000010271)	FMN2 (ENSSMRG00000010270)
Common wall lizard	MODERN SPECIES	11	SIPA1L2 (ENSPMRG00000000464)	MAP10 (ENSPMRG00000000584)	NTPCR (ENSPMRG00000000599)	PCNX2 (ENSPMRG00000000649)	MAP3K21 (ENSPMRG00000000802)	KCNK1 (ENSPMRG00000000854)	SLC35F3 (ENSPMRG00000000883)	TARBP1 (ENSPMRG00000000940)	COA6 (ENSPMRG00000000996)	IRF2BP2 (ENSPMRG00000001011)	ENSPMRG00000001023	RBM34 (ENSPMRG00000001044)	ARID4B (ENSPMRG00000001233)	GGPS1 (ENSPMRG00000001836)	ENSPMRG00000001842	TBCE (ENSPMRG00000001851) ##22	B3GALNT2 (ENSPMRG00000001866)	GNG4 (ENSPMRG00000001879)	LYST (ENSPMRG00000002316)	ENSPMRG00000004774	NID1 (ENSPMRG00000004779)	GPR137B (ENSPMRG00000004791)	ERO1B (ENSPMRG00000004797)	ENSPMRG00000004818	LGALS8 (ENSPMRG00000004822)	HEATR1 (ENSPMRG00000004862)	ACTN2 (ENSPMRG00000004915)	MTR (ENSPMRG00000004938)	RYR2 (ENSPMRG00000005166)	ENSPMRG00000005950	CHRM3 (ENSPMRG00000005958)
Toxicofera	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000154209.a.b
Lizard	MODERN SPECIES		ENSACAG00000034872	SIPA1L2 (ENSACAG00000000406)	MAP10 (ENSACAG00000000728)	NTPCR (ENSACAG00000000731)	PCNX2 (ENSACAG00000000765)	MAP3K21 (ENSACAG00000000975)	KCNK1 (ENSACAG00000001105)	ENSACAG00000033927	SLC35F3 (ENSACAG00000001134)	COA6 (ENSACAG00000001141)	TARBP1 (ENSACAG00000001142)	TOMM20 (ENSACAG00000040846)	RBM34 (ENSACAG00000001253)	ARID4B (ENSACAG00000001289)	GGPS1 (ENSACAG00000001463)	TBCE (ENSACAG00000001489) ##22	B3GALNT2 (ENSACAG00000001633)	GNG4 (ENSACAG00000001696)	LYST (ENSACAG00000001701)	NID1 (ENSACAG00000002089)	GPR137B (ENSACAG00000002344)	ERO1B (ENSACAG00000002379)	ENSACAG00000034724	ENSACAG00000035960	ENSACAG00000035056	HEATR1 (ENSACAG00000002477)	ACTN2 (ENSACAG00000002769)	MTR (ENSACAG00000002970)	RYR2 (ENSACAG00000003211)	ENSACAG00000037739	ENSACAG00000038442
Elapidae	ANCESTRAL SPECIES		ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149.i	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000154289.B	ENSGT00940000161899
Indian cobra	MODERN SPECIES		DISC1 (ENSNNAG00000004459)	SIPA1L2 (ENSNNAG00000004247)	ENSNNAG00000004192	NTPCR (ENSNNAG00000004176)	PCNX2 (ENSNNAG00000004147)	MAP3K21 (ENSNNAG00000004033)	KCNK1 (ENSNNAG00000003482)	SLC35F3 (ENSNNAG00000003455)	COA6 (ENSNNAG00000003443)	TARBP1 (ENSNNAG00000003098)	IRF2BP2 (ENSNNAG00000003030)	TOMM20 (ENSNNAG00000003020)	RBM34 (ENSNNAG00000002999)	GGPS1 (ENSNNAG00000002986)	ARID4B (ENSNNAG00000002974)	TBCE (ENSNNAG00000002949) ##22	B3GALNT2 (ENSNNAG00000002920)	GNG4 (ENSNNAG00000002913)	LYST (ENSNNAG00000002475)	NID1 (ENSNNAG00000002321)	GPR137B (ENSNNAG00000002310)	ERO1B (ENSNNAG00000002299)	LGALS8 (ENSNNAG00000002276)	HEATR1 (ENSNNAG00000002188)	ACTN2 (ENSNNAG00000002149)	MTR (ENSNNAG00000002067)	RYR2 (ENSNNAG00000001714)	CHRM3 (ENSNNAG00000001572)	ENSNNAG00000001564	ENSNNAG00000001549	ENSNNAG00000001538
Elapidae_a	ANCESTRAL SPECIES	2	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388.e	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149.i	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359.i	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Acanthophiinae	ANCESTRAL SPECIES	3	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388.e	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149.i	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359.i	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000165200	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Eastern brown snake	MODERN SPECIES	26	TSNAX (ENSPTXG00000012433)	DISC1 (ENSPTXG00000012443)	SIPA1L2 (ENSPTXG00000012784)	MAP10 (ENSPTXG00000001814)	NTPCR (ENSPTXG00000001816)	PCNX2 (ENSPTXG00000001823)	MAP3K21 (ENSPTXG00000001829)	KCNK1 (ENSPTXG00000001831)	SLC35F3 (ENSPTXG00000001834)	COA6 (ENSPTXG00000001837)	TARBP1 (ENSPTXG00000001847)	IRF2BP2 (ENSPTXG00000001929)	TOMM20 (ENSPTXG00000001930)	RBM34 (ENSPTXG00000001932)	ARID4B (ENSPTXG00000001933)	TBCE (ENSPTXG00000001938) ##22	B3GALNT2 (ENSPTXG00000001943)	GNG4 (ENSPTXG00000001947)	LYST (ENSPTXG00000001959)	NID1 (ENSPTXG00000001967)	GPR137B (ENSPTXG00000001968)	ERO1B (ENSPTXG00000001969)	LGALS8 (ENSPTXG00000001971)	HEATR1 (ENSPTXG00000001976)	ACTN2 (ENSPTXG00000001983)	MTR (ENSPTXG00000002797)	RYR2 (ENSPTXG00000002954)	CHRM3 (ENSPTXG00000002975)	ENSPTXG00000002977	GREM2 (ENSPTXG00000002980)	ENSPTXG00000002982
Mainland tiger snake	MODERN SPECIES	28	DISC1 (ENSNSUG00000001374)	SIPA1L2 (ENSNSUG00000001089)	MAP10 (ENSNSUG00000001082)	ENSNSUG00000001081	NTPCR (ENSNSUG00000001079)	PCNX2 (ENSNSUG00000001068)	MAP3K21 (ENSNSUG00000001064)	KCNK1 (ENSNSUG00000001063)	SLC35F3 (ENSNSUG00000001061)	COA6 (ENSNSUG00000001056)	TARBP1 (ENSNSUG00000001044)	IRF2BP2 (ENSNSUG00000001041)	TOMM20 (ENSNSUG00000001037)	ENSNSUG00000001036	ARID4B (ENSNSUG00000000258)	TBCE (ENSNSUG00000000220) ##22	B3GALNT2 (ENSNSUG00000000021)	GNG4 (ENSNSUG00000017943)	LYST (ENSNSUG00000017942)	NID1 (ENSNSUG00000017941)	GPR137B (ENSNSUG00000017939)	ERO1B (ENSNSUG00000017938)	ENSNSUG00000017937	LGALS8 (ENSNSUG00000017936)	ENSNSUG00000017935	ENSNSUG00000017934	ACTN2 (ENSNSUG00000017933)	MTR (ENSNSUG00000016909)	RYR2 (ENSNSUG00000016892)	CHRM3 (ENSNSUG00000016891)	ENSNSUG00000016890
Blue-lipped sea krait	MODERN SPECIES	662																TBCE (ENSLLTG00000017477) ##22	ENSLLTG00000017473
tuatara	MODERN SPECIES	690																TBCE (ENSSPUG00000016750) ##22
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT01030000235112	ENSGT00940000154289.B	ENSGT00940000161899
Platypus	MODERN SPECIES	10	ENSOANG00000013722	TSNAX (ENSOANG00000013721)	ENSOANG00000037328	SIPA1L2 (ENSOANG00000004653)	NTPCR (ENSOANG00000037851)	PCNX2 (ENSOANG00000006841)	KCNK1 (ENSOANG00000012916)	SLC35F3 (ENSOANG00000002914)	ENSOANG00000044787	ENSOANG00000004525	ENSOANG00000041931	TOMM20 (ENSOANG00000001205)	RBM34 (ENSOANG00000001206)	ARID4B (ENSOANG00000001208)	GGPS1 (ENSOANG00000001212)	TBCE (ENSOANG00000001213) ##22	B3GALNT2 (ENSOANG00000001215)	GNG4 (ENSOANG00000001563)	LYST (ENSOANG00000001216)	NID1 (ENSOANG00000001218)	GPR137B (ENSOANG00000041576)	ERO1B (ENSOANG00000029286)	ENSOANG00000039266	HEATR1 (ENSOANG00000006937)	ACTN2 (ENSOANG00000009397)	MTR (ENSOANG00000048280)	RYR2 (ENSOANG00000010281)	CHRM3 (ENSOANG00000041832)	ENSOANG00000042159	ENSOANG00000045178	GREM2 (ENSOANG00000010275)
Theria	ANCESTRAL SPECIES	12	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Marsupialia	ANCESTRAL SPECIES	3	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Marsupialia_b	ANCESTRAL SPECIES	6	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Diprotodontia	ANCESTRAL SPECIES	7	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Diprotodontia_a	ANCESTRAL SPECIES	3	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.g.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Common wonbat	DUPLICATION
Common wonbat	MODERN SPECIES	1035	ENSVURG00010002018	ENSVURG00010002109	ENSVURG00010002240	ENSVURG00010002892	ENSVURG00010002944	ENSVURG00010003016	ENSVURG00010003038	ENSVURG00010003138	ENSVURG00010003578	ENSVURG00010003639	ENSVURG00010003652	ENSVURG00010003736	ENSVURG00010003935	ENSVURG00010003943	ENSVURG00010003951	ENSVURG00010004029 ##22	ENSVURG00010004059	ENSVURG00010004143	ENSVURG00010004159	ENSVURG00010004209	ENSVURG00010004255	ENSVURG00010004350	ENSVURG00010005374	ENSVURG00010005388	ENSVURG00010005441	ENSVURG00010005507	ENSVURG00010005583	ENSVURG00010005657	ENSVURG00010006018	ENSVURG00010006995	ENSVURG00010007049
Common wonbat	MODERN SPECIES	1035	ENSVURG00010001773	ENSVURG00010001863	ENSVURG00010002619	ENSVURG00010002671	ENSVURG00010002679	ENSVURG00010002732	ENSVURG00010002804	ENSVURG00010002819	ENSVURG00010002876	ENSVURG00010003421	ENSVURG00010003478	ENSVURG00010003503	ENSVURG00010003528	ENSVURG00010003743	ENSVURG00010003749	ENSVURG00010003768 ##22	ENSVURG00010003841	ENSVURG00010003872	ENSVURG00010004057	ENSVURG00010004793	ENSVURG00010004845	ENSVURG00010004924	ENSVURG00010005985	ENSVURG00010005999	ENSVURG00010006012	ENSVURG00010006357	ENSVURG00010013814	ENSVURG00010013876	ENSVURG00010014008	ENSVURG00010015062	ENSVURG00010015117
koala	MODERN SPECIES	83	SIPA1L2 (ENSPCIG00000029108)	ENSPCIG00000001971	ENSPCIG00000001951	PCNX2 (ENSPCIG00000001724)	ENSPCIG00000029699	MAP3K21 (ENSPCIG00000029701)	KCNK1 (ENSPCIG00000029702)	SLC35F3 (ENSPCIG00000029704)	COA6 (ENSPCIG00000029705)	TARBP1 (ENSPCIG00000029710)	IRF2BP2 (ENSPCIG00000029728)	ENSPCIG00000029734	RBM34 (ENSPCIG00000029736)	ARID4B (ENSPCIG00000029756)	GGPS1 (ENSPCIG00000029802)	TBCE (ENSPCIG00000018226) ##22	B3GALNT2 (ENSPCIG00000018216)	GNG4 (ENSPCIG00000018255)	LYST (ENSPCIG00000003740)	NID1 (ENSPCIG00000003050)	GPR137B (ENSPCIG00000008334)	ERO1B (ENSPCIG00000008338)	EDARADD (ENSPCIG00000008342)	ENSPCIG00000033460	HEATR1 (ENSPCIG00000008351)	ACTN2 (ENSPCIG00000008366)	MTR (ENSPCIG00000008386)	RYR2 (ENSPCIG00000020611)	ZP4 (ENSPCIG00000020486)
Wallaby	MODERN SPECIES	2590																ENSMEUG00000004777 ##22
Tasmanian devil	MODERN SPECIES	3	ENSSHAG00000002544	ENSSHAG00000026219	SIPA1L2 (ENSSHAG00000011171)	ENSSHAG00000032184	NTPCR (ENSSHAG00000007471)	PCNX2 (ENSSHAG00000002534)	MAP3K21 (ENSSHAG00000027157)	KCNK1 (ENSSHAG00000011575)	SLC35F3 (ENSSHAG00000024071)	TARBP1 (ENSSHAG00000000013)	IRF2BP2 (ENSSHAG00000024262)	TOMM20 (ENSSHAG00000022894)	RBM34 (ENSSHAG00000015812)	ARID4B (ENSSHAG00000015214)	GGPS1 (ENSSHAG00000022767)	TBCE (ENSSHAG00000014780) ##22	B3GALNT2 (ENSSHAG00000014693)	LYST (ENSSHAG00000013171)	NID1 (ENSSHAG00000011798)	GPR137B (ENSSHAG00000010599)	ERO1B (ENSSHAG00000010253)	EDARADD (ENSSHAG00000029385)	LGALS8 (ENSSHAG00000008607)	HEATR1 (ENSSHAG00000007902)	ACTN2 (ENSSHAG00000005901)	MTR (ENSSHAG00000002966)	RYR2 (ENSSHAG00000009656)	ENSSHAG00000009185	CHRM3 (ENSSHAG00000014441)	FMN2 (ENSSHAG00000020854)	ENSSHAG00000024333
Opossum	MODERN SPECIES	1	NTPCR (ENSMODG00000008600)	ENSMODG00000038554	PCNX2 (ENSMODG00000008590)	MAP3K21 (ENSMODG00000008553)	ENSMODG00000046510	KCNK1 (ENSMODG00000008541)	SLC35F3 (ENSMODG00000008526)	ENSMODG00000008510	TARBP1 (ENSMODG00000008504)	IRF2BP2 (ENSMODG00000008478)	TOMM20 (ENSMODG00000008452)	RBM34 (ENSMODG00000008436)	ARID4B (ENSMODG00000008417)	GGPS1 (ENSMODG00000047954)	ENSMODG00000024615	TBCE (ENSMODG00000008312) ##22	ENSMODG00000043602	GNG4 (ENSMODG00000029104)	ENSMODG00000043325 #28	LYST (ENSMODG00000008251)	ENSMODG00000048273	NID1 (ENSMODG00000008119)	GPR137B (ENSMODG00000008061)	ERO1B (ENSMODG00000008014)	ENSMODG00000007986	LGALS8 (ENSMODG00000007976)	HEATR1 (ENSMODG00000007936)	ACTN2 (ENSMODG00000007497)	MTR (ENSMODG00000007459)	RYR2 (ENSMODG00000007421)	ENSMODG00000007226
Eutheria	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Atlantogenata	ANCESTRAL SPECIES	44	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Xenarthra	ANCESTRAL SPECIES	112									ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000161899	ENSGT00940000154209.a.b
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1988												ENSDNOG00000049262	ENSDNOG00000033329	ENSDNOG00000046315	LDOC1 (ENSDNOG00000009249)	ENSDNOG00000041016 ##22
Armadillo	MODERN SPECIES	3033									ENSDNOG00000038750	ENSDNOG00000015598	TARBP1 (ENSDNOG00000008637)	ENSDNOG00000019822	RBM34 (ENSDNOG00000044740)	ARID4B (ENSDNOG00000005711)	GGPS1 (ENSDNOG00000000926)	ENSDNOG00000017339 ##22	B3GALNT2 (ENSDNOG00000017343)	GNG4 (ENSDNOG00000032806)	LYST (ENSDNOG00000005742)	NID1 (ENSDNOG00000001554)	ENSDNOG00000048042	GPR137B (ENSDNOG00000013309)	ERO1B (ENSDNOG00000008715)	EDARADD (ENSDNOG00000047024)	LGALS8 (ENSDNOG00000036659)	HEATR1 (ENSDNOG00000009046)	ACTN2 (ENSDNOG00000039914)	MTR (ENSDNOG00000012783)	RYR2 (ENSDNOG00000015577)	CHRM3 (ENSDNOG00000008337)	ENSDNOG00000033414
Sloth	MODERN SPECIES	1585																ENSCHOG00000007364 ##22	B3GALNT2 (ENSCHOG00000007385)
Afrotheria	ANCESTRAL SPECIES	47	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Tenrec	MODERN SPECIES	1760																TBCE (ENSETEG00000015109) ##22	B3GALNT2 (ENSETEG00000015113)	GNG4 (ENSETEG00000015115)
Afrotheria_a	ANCESTRAL SPECIES	48	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000154289.B
Hyrax	MODERN SPECIES	1421																TBCE (ENSPCAG00000002868) ##22	B3GALNT2 (ENSPCAG00000002974)
Elephant	MODERN SPECIES	126	ENSLAFG00000026718	SIPA1L2 (ENSLAFG00000002420)	MAP10 (ENSLAFG00000020699)	NTPCR (ENSLAFG00000022724)	PCNX2 (ENSLAFG00000017938)	MAP3K21 (ENSLAFG00000001764)	KCNK1 (ENSLAFG00000003530)	SLC35F3 (ENSLAFG00000011492)	ENSLAFG00000030912	TARBP1 (ENSLAFG00000011394)	IRF2BP2 (ENSLAFG00000032672)	ENSLAFG00000015499	RBM34 (ENSLAFG00000014289)	ARID4B (ENSLAFG00000014295)	GGPS1 (ENSLAFG00000012036)	TBCE (ENSLAFG00000006718) ##22	B3GALNT2 (ENSLAFG00000006723)	GNG4 (ENSLAFG00000027636)	LYST (ENSLAFG00000015071)	NID1 (ENSLAFG00000005889)	GPR137B (ENSLAFG00000001415)	ERO1B (ENSLAFG00000001418)	EDARADD (ENSLAFG00000020561)	LGALS8 (ENSLAFG00000005065)	ENSLAFG00000002968	ACTN2 (ENSLAFG00000014233)	MTR (ENSLAFG00000006529)	RYR2 (ENSLAFG00000006539)	ZP4 (ENSLAFG00000004018)	CHRM3 (ENSLAFG00000010801)	ENSLAFG00000001045
Boreoeutheria	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Euarchontoglires	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Primates	ANCESTRAL SPECIES	7	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Strepsirrhini	ANCESTRAL SPECIES		ENSGT00390000006176.q.a	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Lemuriformes	ANCESTRAL SPECIES	6	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00940000164119	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Mouse lemur	MODERN SPECIES	8	SIPA1L2 (ENSMICG00000015451)	MAP10 (ENSMICG00000027261)	NTPCR (ENSMICG00000015482)	PCNX2 (ENSMICG00000015490)	MAP3K21 (ENSMICG00000015508)	KCNK1 (ENSMICG00000041556)	SLC35F3 (ENSMICG00000013397)	ENSMICG00000034015	TARBP1 (ENSMICG00000015280)	IRF2BP2 (ENSMICG00000046369)	ENSMICG00000042731	ENSMICG00000016336	ARID4B (ENSMICG00000016358)	ENSMICG00000047841	GGPS1 (ENSMICG00000007369)	TBCE (ENSMICG00000007372) ##22	ENSMICG00000007386	GNG4 (ENSMICG00000028656)	LYST (ENSMICG00000009412)	NID1 (ENSMICG00000002600)	GPR137B (ENSMICG00000002610)	ERO1B (ENSMICG00000002613)	EDARADD (ENSMICG00000047115)	LGALS8 (ENSMICG00000015835)	HEATR1 (ENSMICG00000015859)	ACTN2 (ENSMICG00000015908)	MTR (ENSMICG00000015938)	RYR2 (ENSMICG00000015975)	ZP4 (ENSMICG00000016091)	CHRM3 (ENSMICG00000031202)	FMN2 (ENSMICG00000037462)
Lemuriformes_a	ANCESTRAL SPECIES	14	ENSGT00390000006176.q.a	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324
Coquerels sifaka	MODERN SPECIES	812	ENSPCOG00000018491	SIPA1L2 (ENSPCOG00000018831)	MAP10 (ENSPCOG00000025923)	NTPCR (ENSPCOG00000026698)	PCNX2 (ENSPCOG00000018704)	MAP3K21 (ENSPCOG00000027124)	KCNK1 (ENSPCOG00000019655)	SLC35F3 (ENSPCOG00000023418)	ENSPCOG00000020423	TARBP1 (ENSPCOG00000005666)	IRF2BP2 (ENSPCOG00000012988)	TOMM20 (ENSPCOG00000021362)	RBM34 (ENSPCOG00000018448)	ARID4B (ENSPCOG00000024328)	GGPS1 (ENSPCOG00000021243)	TBCE (ENSPCOG00000021439) ##22	B3GALNT2 (ENSPCOG00000023952)	GNG4 (ENSPCOG00000004047)	LYST (ENSPCOG00000019565)	NID1 (ENSPCOG00000009614)	GPR137B (ENSPCOG00000016957)	ERO1B (ENSPCOG00000006144)	EDARADD (ENSPCOG00000024505)	LGALS8 (ENSPCOG00000028427)	HEATR1 (ENSPCOG00000018534)	ACTN2 (ENSPCOG00000026369)	MTR (ENSPCOG00000027883)	ENSPCOG00000003558	RYR2 (ENSPCOG00000016610)	ZP4 (ENSPCOG00000024830)	ENSPCOG00000027601
Greater bamboo lemur	MODERN SPECIES	75	ENSPSMG00000023237	ENSPSMG00000023242	SIPA1L2 (ENSPSMG00000023283)	MAP10 (ENSPSMG00000023290)	NTPCR (ENSPSMG00000023300)	PCNX2 (ENSPSMG00000023316)	MAP3K21 (ENSPSMG00000023322)	KCNK1 (ENSPSMG00000023325)	SLC35F3 (ENSPSMG00000023336)	ENSPSMG00000023343	IRF2BP2 (ENSPSMG00000023357)	ENSPSMG00000023374	RBM34 (ENSPSMG00000023394)	ARID4B (ENSPSMG00000023485)	GGPS1 (ENSPSMG00000023526)	TBCE (ENSPSMG00000023591) ##22	B3GALNT2 (ENSPSMG00000023641)	GNG4 (ENSPSMG00000023646)	LYST (ENSPSMG00000023795)	ENSPSMG00000023859	NID1 (ENSPSMG00000023922)	ENSPSMG00000023946
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	150																ENSOGAG00000024262 ##22	PKHD1 (ENSOGAG00000015530)	IL17A (ENSOGAG00000015542)	ENSOGAG00000015545	MCM3 (ENSOGAG00000015546)	PAQR8 (ENSOGAG00000027916)	EFHC1 (ENSOGAG00000015937)	TRAM2 (ENSOGAG00000011863)	TMEM14A (ENSOGAG00000014698)	ENSOGAG00000014699	ENSOGAG00000026926	ENSOGAG00000003726	GSTA5 (ENSOGAG00000032237)	ENSOGAG00000031992	GSTA4 (ENSOGAG00000007865)	CILK1 (ENSOGAG00000007868)
Bushbaby	MODERN SPECIES	231	DISC1 (ENSOGAG00000009237)	SIPA1L2 (ENSOGAG00000007607)	MAP10 (ENSOGAG00000024613)	NTPCR (ENSOGAG00000004633)	PCNX2 (ENSOGAG00000004635)	MAP3K21 (ENSOGAG00000010128)	KCNK1 (ENSOGAG00000002272)	SLC35F3 (ENSOGAG00000002376)	TARBP1 (ENSOGAG00000002379)	IRF2BP2 (ENSOGAG00000002391)	TOMM20 (ENSOGAG00000032693)	RBM34 (ENSOGAG00000012470)	ARID4B (ENSOGAG00000012476)	ENSOGAG00000006640	GGPS1 (ENSOGAG00000013760)	TBCE (ENSOGAG00000007422) ##22	B3GALNT2 (ENSOGAG00000007425)	GNG4 (ENSOGAG00000007427)	LYST (ENSOGAG00000000135)	NID1 (ENSOGAG00000014737)	GPR137B (ENSOGAG00000027989)	ERO1B (ENSOGAG00000015531)	ENSOGAG00000030736	DRG1 (ENSOGAG00000012268)	EIF4ENIF1 (ENSOGAG00000012272)	SFI1 (ENSOGAG00000007556)	ABHD14B (ENSOGAG00000012132)	PISD (ENSOGAG00000034158)	PRR14L (ENSOGAG00000007564)	DEPDC5 (ENSOGAG00000007567)	YWHAH (ENSOGAG00000034562)
Haplorrhini	ANCESTRAL SPECIES	41	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT01030000235112
Simiiformes	ANCESTRAL SPECIES	31	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Catarrhini	ANCESTRAL SPECIES	27	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Hominoidea	ANCESTRAL SPECIES	7	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Hominidae	ANCESTRAL SPECIES	6	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00950000182967.a.a.a.a.a.a.o.a.a.a.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	6	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00950000182967.a.a.a.a.a.a.o.a.a.a.b.b
Homo/Pan group	ANCESTRAL SPECIES	7	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00950000182967.a.a.a.a.a.a.o.a.a.a.b.b
Pan	ANCESTRAL SPECIES		ENSGT00940000157374	ENSGT00390000014122.i.b.a.a.a.a.c.b	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000000475.sb.u.e	ENSGT00390000004094	ENSGT00390000003939	ENSGT00390000011698.c.a.c.a.j.a.a	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00950000182967.a.a.a.a.a.a.o.a.a.a.b.b
Bonobo	MODERN SPECIES		MAP10 (ENSPPAG00000022583)	ENSPPAG00000030395	PCNX2 (ENSPPAG00000017694)	ENSPPAG00000039639	ENSPPAG00000036146	ENSPPAG00000039094	KCNK1 (ENSPPAG00000030456)	SLC35F3 (ENSPPAG00000039139)	ENSPPAG00000038459	COA6 (ENSPPAG00000039037)	TARBP1 (ENSPPAG00000028097)	ENSPPAG00000030528	RBM34 (ENSPPAG00000030692)	ARID4B (ENSPPAG00000031651)	GGPS1 (ENSPPAG00000030820)	TBCE (ENSPPAG00000028683) ##22	ENSPPAG00000020240	B3GALNT2 (ENSPPAG00000035839)	GNG4 (ENSPPAG00000033594)	LYST (ENSPPAG00000037311)	ENSPPAG00000030475	NID1 (ENSPPAG00000034176)	GPR137B (ENSPPAG00000031164)	ERO1B (ENSPPAG00000043582)	EDARADD (ENSPPAG00000038427)	ENSPPAG00000030182	ENSPPAG00000034870	HEATR1 (ENSPPAG00000036487)	ACTN2 (ENSPPAG00000032972)	ENSPPAG00000030376	MTR (ENSPPAG00000001371)
Chimpanzee	MODERN SPECIES		ENSPTRG00000002116	PCNX2 (ENSPTRG00000002117)	ENSPTRG00000051060	MAP3K21 (ENSPTRG00000002119)	KCNK1 (ENSPTRG00000002120)	SLC35F3 (ENSPTRG00000002121)	ENSPTRG00000042958	COA6 (ENSPTRG00000002122)	TARBP1 (ENSPTRG00000002124)	ENSPTRG00000051024	IRF2BP2 (ENSPTRG00000030114)	TOMM20 (ENSPTRG00000002127)	RBM34 (ENSPTRG00000032432)	ARID4B (ENSPTRG00000002129)	GGPS1 (ENSPTRG00000002130)	TBCE (ENSPTRG00000002131) ##22	B3GALNT2 (ENSPTRG00000002132)	GNG4 (ENSPTRG00000002133)	LYST (ENSPTRG00000002134)	ENSPTRG00000049072	NID1 (ENSPTRG00000002135)	GPR137B (ENSPTRG00000002136)	ERO1B (ENSPTRG00000002137)	EDARADD (ENSPTRG00000033991)	ENSPTRG00000052416	LGALS8 (ENSPTRG00000002140)	HEATR1 (ENSPTRG00000002141)	ACTN2 (ENSPTRG00000002144)	MTR (ENSPTRG00000002145)	ENSPTRG00000044356	MT1HL1 (ENSPTRG00000043308)
Human	MODERN SPECIES		SIPA1L2 (ENSG00000116991)	MAP10 (ENSG00000212916)	NTPCR (ENSG00000135778)	PCNX2 (ENSG00000135749)	MAP3K21 (ENSG00000143674)	KCNK1 (ENSG00000135750)	SLC35F3 (ENSG00000183780)	COA6 (ENSG00000168275)	TARBP1 (ENSG00000059588)	IRF2BP2 (ENSG00000168264)	TOMM20 (ENSG00000173726)	RBM34 (ENSG00000188739)	ARID4B (ENSG00000054267)	GGPS1 (ENSG00000152904)	ENSG00000285053	TBCE (ENSG00000284770) ##22	B3GALNT2 (ENSG00000162885)	GNG4 (ENSG00000168243)	LYST (ENSG00000143669)	NID1 (ENSG00000116962)	GPR137B (ENSG00000077585)	ERO1B (ENSG00000086619)	EDARADD (ENSG00000186197)	LGALS8 (ENSG00000116977)	HEATR1 (ENSG00000119285)	ACTN2 (ENSG00000077522)	MTR (ENSG00000116984)	MT1HL1 (ENSG00000244020)	RYR2 (ENSG00000198626)	ZP4 (ENSG00000116996)	CHRM3 (ENSG00000133019)
Gorilla	MODERN SPECIES		MAP10 (ENSGGOG00000006627)	ENSGGOG00000015198	PCNX2 (ENSGGOG00000034829)	MAP3K21 (ENSGGOG00000005704)	KCNK1 (ENSGGOG00000010963)	SLC35F3 (ENSGGOG00000012235)	ENSGGOG00000038297	COA6 (ENSGGOG00000041670)	TARBP1 (ENSGGOG00000022879)	ENSGGOG00000042844	ENSGGOG00000023288	TOMM20 (ENSGGOG00000025184)	RBM34 (ENSGGOG00000007924)	ARID4B (ENSGGOG00000022080)	GGPS1 (ENSGGOG00000008897)	TBCE (ENSGGOG00000013627) ##22	B3GALNT2 (ENSGGOG00000013638)	GNG4 (ENSGGOG00000007898)	LYST (ENSGGOG00000009620)	ENSGGOG00000043118	NID1 (ENSGGOG00000000381)	GPR137B (ENSGGOG00000005990)	ERO1B (ENSGGOG00000026132)	EDARADD (ENSGGOG00000002149)	ENSGGOG00000043831	LGALS8 (ENSGGOG00000006907)	HEATR1 (ENSGGOG00000006913)	ACTN2 (ENSGGOG00000011905)	MTR (ENSGGOG00000016123)	ENSGGOG00000023434	RYR2 (ENSGGOG00000012582)
Orangutan	MODERN SPECIES		DISC1 (ENSPPYG00000000111)	SIPA1L2 (ENSPPYG00000000110)	MAP10 (ENSPPYG00000000109)	ENSPPYG00000038990	PCNX2 (ENSPPYG00000000107)	MAP3K21 (ENSPPYG00000000106)	KCNK1 (ENSPPYG00000000105)	SLC35F3 (ENSPPYG00000000104)	ENSPPYG00000035388	ENSPPYG00000000103	TARBP1 (ENSPPYG00000000102)	IRF2BP2 (ENSPPYG00000000101)	TOMM20 (ENSPPYG00000034000)	ENSPPYG00000000098	GGPS1 (ENSPPYG00000000097)	TBCE (ENSPPYG00000000096) ##22	B3GALNT2 (ENSPPYG00000000095)	GNG4 (ENSPPYG00000034134)	LYST (ENSPPYG00000000092)	NID1 (ENSPPYG00000000091)	GPR137B (ENSPPYG00000000090)	ERO1B (ENSPPYG00000000089)	EDARADD (ENSPPYG00000041338)	ENSPPYG00000031231	ENSPPYG00000000087	ENSPPYG00000038440	HEATR1 (ENSPPYG00000000085)	ACTN2 (ENSPPYG00000000084)	MTR (ENSPPYG00000000083)	MT1HL1 (ENSPPYG00000000080)	RYR2 (ENSPPYG00000000079)
Gibbon	MODERN SPECIES	20	ENSNLEG00000002349	ENSNLEG00000028386	PCNX2 (ENSNLEG00000002367)	MAP3K21 (ENSNLEG00000002463)	ENSNLEG00000029888	SLC35F3 (ENSNLEG00000031022)	ENSNLEG00000030108	COA6 (ENSNLEG00000002501)	TARBP1 (ENSNLEG00000002518)	ENSNLEG00000002590	TOMM20 (ENSNLEG00000029038)	RBM34 (ENSNLEG00000002610)	ENSNLEG00000032959	ARID4B (ENSNLEG00000002665)	GGPS1 (ENSNLEG00000002808)	TBCE (ENSNLEG00000002823) ##22	ENSNLEG00000032061	B3GALNT2 (ENSNLEG00000002950)	ENSNLEG00000002971	ENSNLEG00000035816	LYST (ENSNLEG00000002982)	NID1 (ENSNLEG00000003070)	ENSNLEG00000036269	GPR137B (ENSNLEG00000003165)	ERO1B (ENSNLEG00000003192)	EDARADD (ENSNLEG00000003225)	ENSNLEG00000032843	ENSNLEG00000018839	LGALS8 (ENSNLEG00000003250)	HEATR1 (ENSNLEG00000003345)	ACTN2 (ENSNLEG00000003539)
Cercopithecidae	ANCESTRAL SPECIES	33	ENSGT00390000006176.q.b	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Cercopithecinae	ANCESTRAL SPECIES	18	ENSGT01100000263493.a.b.a.a.a.b.a.a.a	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Cercopithecinae_a	ANCESTRAL SPECIES		ENSGT01100000263493.a.b.a.a.a.b.a.a.a.b	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Cercopithecinae_b	ANCESTRAL SPECIES	3	ENSGT00390000006176.r	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824
Olive baboon	MODERN SPECIES		SIPA1L2 (ENSPANG00000024427)	MAP10 (ENSPANG00000030141)	NTPCR (ENSPANG00000009145)	PCNX2 (ENSPANG00000016860)	MAP3K21 (ENSPANG00000013610)	KCNK1 (ENSPANG00000024047)	ENSPANG00000043317	SLC35F3 (ENSPANG00000014847)	COA6 (ENSPANG00000007339)	TARBP1 (ENSPANG00000021933)	IRF2BP2 (ENSPANG00000019525)	TOMM20 (ENSPANG00000016861)	RBM34 (ENSPANG00000010411)	ARID4B (ENSPANG00000013611)	GGPS1 (ENSPANG00000019749)	TBCE (ENSPANG00000021031) ##22	B3GALNT2 (ENSPANG00000015279)	GNG4 (ENSPANG00000015791)	LYST (ENSPANG00000016715)	ENSPANG00000036019	NID1 (ENSPANG00000010412)	GPR137B (ENSPANG00000006336)	ERO1B (ENSPANG00000018966)	ENSPANG00000049802	ENSPANG00000043056	EDARADD (ENSPANG00000009366)	LGALS8 (ENSPANG00000008422)	HEATR1 (ENSPANG00000020212)	ENSPANG00000045110	ENSPANG00000041017	ACTN2 (ENSPANG00000019888)
Cercopithecinae_d	ANCESTRAL SPECIES	68	ENSGT00390000006176.r	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000154892.e.a	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a
Sooty mangabey	MODERN SPECIES	449	TSNAX (ENSCATG00000037048)	DISC1 (ENSCATG00000018901)	SIPA1L2 (ENSCATG00000043594)	NTPCR (ENSCATG00000040507)	PCNX2 (ENSCATG00000018119)	MAP3K21 (ENSCATG00000022233)	KCNK1 (ENSCATG00000039926)	SLC35F3 (ENSCATG00000036097)	COA6 (ENSCATG00000041539)	TARBP1 (ENSCATG00000011754)	IRF2BP2 (ENSCATG00000034706)	TOMM20 (ENSCATG00000006064)	RBM34 (ENSCATG00000031771)	ARID4B (ENSCATG00000042166)	GGPS1 (ENSCATG00000042363)	TBCE (ENSCATG00000026739) ##22	B3GALNT2 (ENSCATG00000041972)	GNG4 (ENSCATG00000038013)	LYST (ENSCATG00000038446)	ENSCATG00000039185	NID1 (ENSCATG00000016642)	ENSCATG00000026864	GPR137B (ENSCATG00000037762)	ERO1B (ENSCATG00000041284)	EDARADD (ENSCATG00000025338)	ENSCATG00000038318	LGALS8 (ENSCATG00000032807)	HEATR1 (ENSCATG00000021120)	ACTN2 (ENSCATG00000039988)	ENSCATG00000036578	MTR (ENSCATG00000031365)
Drill	MODERN SPECIES	1005							KCNK1 (ENSMLEG00000040326)	SLC35F3 (ENSMLEG00000031963)	COA6 (ENSMLEG00000032737)	TARBP1 (ENSMLEG00000044182)	IRF2BP2 (ENSMLEG00000031137)	TOMM20 (ENSMLEG00000036369)	ENSMLEG00000044363	ARID4B (ENSMLEG00000033583)	GGPS1 (ENSMLEG00000038865)	TBCE (ENSMLEG00000030382) ##22	B3GALNT2 (ENSMLEG00000032063)	GNG4 (ENSMLEG00000039769)
Macaca	ANCESTRAL SPECIES		ENSGT01100000263493.a.b.a.a.a.b.a.a.a.b	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d
Macaca_a	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a.j	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00940000174433.B.b	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00390000010721.a.a.a.b	ENSGT00940000153309.c.a.e
Crab-eating macaque	MODERN SPECIES		SIPA1L2 (ENSMFAG00000039676)	MAP10 (ENSMFAG00000035487)	NTPCR (ENSMFAG00000037305)	PCNX2 (ENSMFAG00000034561)	MAP3K21 (ENSMFAG00000014791)	ENSMFAG00000056382	KCNK1 (ENSMFAG00000041435)	SLC35F3 (ENSMFAG00000045604)	COA6 (ENSMFAG00000034136)	ENSMFAG00000061039	ENSMFAG00000041239	ENSMFAG00000003478	ARID4B (ENSMFAG00000044016)	GGPS1 (ENSMFAG00000033173)	ENSMFAG00000054307	TBCE (ENSMFAG00000003983) ##22	B3GALNT2 (ENSMFAG00000001068)	GNG4 (ENSMFAG00000062601)	ENSMFAG00000039800	ENSMFAG00000065564	LYST (ENSMFAG00000044431)	ENSMFAG00000059454	NID1 (ENSMFAG00000026117)	ENSMFAG00000052304	GPR137B (ENSMFAG00000034812)	ERO1B (ENSMFAG00000045389)	EDARADD (ENSMFAG00000038481)	LGALS8 (ENSMFAG00000032856)	HEATR1 (ENSMFAG00000044672)	ACTN2 (ENSMFAG00000041700)	MTR (ENSMFAG00000031925)
Rhesus	MODERN SPECIES		NTPCR (ENSMMUG00000063981)	PCNX2 (ENSMMUG00000012615)	MAP3K21 (ENSMMUG00000009226)	KCNK1 (ENSMMUG00000022429)	ENSMMUG00000052225	SLC35F3 (ENSMMUG00000006226)	ENSMMUG00000052207	COA6 (ENSMMUG00000021702)	TARBP1 (ENSMMUG00000021703)	IRF2BP2 (ENSMMUG00000049832)	TOMM20 (ENSMMUG00000058824)	RBM34 (ENSMMUG00000039424)	ARID4B (ENSMMUG00000007141)	GGPS1 (ENSMMUG00000007145)	ENSMMUG00000053318	TBCE (ENSMMUG00000008426) ##22	B3GALNT2 (ENSMMUG00000008427)	GNG4 (ENSMMUG00000053807)	LYST (ENSMMUG00000012729)	NID1 (ENSMMUG00000012716)	GPR137B (ENSMMUG00000014263)	ENSMMUG00000056299	ERO1B (ENSMMUG00000044139)	EDARADD (ENSMMUG00000021238)	LGALS8 (ENSMMUG00000015132)	HEATR1 (ENSMMUG00000015135)	ENSMMUG00000043556	ACTN2 (ENSMMUG00000020471)	MTR (ENSMMUG00000010073)	RYR2 (ENSMMUG00000001060)	ZP4 (ENSMMUG00000002105)
Pig-tailed macaque	MODERN SPECIES	530											IRF2BP2 (ENSMNEG00000030590)	TOMM20 (ENSMNEG00000033619)	RBM34 (ENSMNEG00000040149)	ARID4B (ENSMNEG00000014840)	GGPS1 (ENSMNEG00000038980)	TBCE (ENSMNEG00000033564) ##22	B3GALNT2 (ENSMNEG00000040976)	GNG4 (ENSMNEG00000044612)	LYST (ENSMNEG00000033677)	ENSMNEG00000039691	NID1 (ENSMNEG00000028275)	GPR137B (ENSMNEG00000033925)	ERO1B (ENSMNEG00000039548)	EDARADD (ENSMNEG00000027890)	ENSMNEG00000033371	LGALS8 (ENSMNEG00000034839)	HEATR1 (ENSMNEG00000035612)	ACTN2 (ENSMNEG00000044809)	ENSMNEG00000028908	MTR (ENSMNEG00000033216)	RYR2 (ENSMNEG00000006610)
Vervet Monkey	MODERN SPECIES	17	MAP10 (ENSCSAG00000019367)	NTPCR (ENSCSAG00000010197)	ENSCSAG00000010192	ENSCSAG00000010186	MAP3K21 (ENSCSAG00000010168)	ENSCSAG00000019368	KCNK1 (ENSCSAG00000010120)	ENSCSAG00000019369 #26	SLC35F3 (ENSCSAG00000010114)	COA6 (ENSCSAG00000010108)	TARBP1 (ENSCSAG00000010100)	IRF2BP2 (ENSCSAG00000010085)	ENSCSAG00000010083	RBM34 (ENSCSAG00000010079)	ARID4B (ENSCSAG00000010069)	TBCE (ENSCSAG00000010064) ##22	B3GALNT2 (ENSCSAG00000010061)	GNG4 (ENSCSAG00000010055)	LYST (ENSCSAG00000009998)	NID1 (ENSCSAG00000009768)	GPR137B (ENSCSAG00000009761)	ERO1B (ENSCSAG00000009755)	EDARADD (ENSCSAG00000009746)	LGALS8 (ENSCSAG00000009741)	HEATR1 (ENSCSAG00000009731)	ACTN2 (ENSCSAG00000009716)	MTR (ENSCSAG00000009702)	RYR2 (ENSCSAG00000009677)	ZP4 (ENSCSAG00000009624)	ENSCSAG00000019370	CHRM3 (ENSCSAG00000019371)
Rhinopithecus	ANCESTRAL SPECIES	63	ENSGT00940000160906	ENSGT00940000153733.A	ENSGT00390000010352	ENSGT00500000044890.a.b	ENSGT00940000160762	ENSGT00390000010128	ENSGT00390000011958	ENSGT00530000064411	ENSGT00390000010063.q.a	ENSGT00530000063816.c	ENSGT00950000182988.a.b.a	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153201.j.k.a.a.a.b.b.b.a	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00950000182805.a.a.a.b.i.b.b.b	ENSGT00940000155727	ENSGT00390000015845	ENSGT00910000147285	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d
Golden snub-nosed monkey	MODERN SPECIES	2504												ENSRROG00000032599	RBM34 (ENSRROG00000039131)	ARID4B (ENSRROG00000045203)	GGPS1 (ENSRROG00000032231)	TBCE (ENSRROG00000010869) ##22	B3GALNT2 (ENSRROG00000036528)	GNG4 (ENSRROG00000039962)	LYST (ENSRROG00000042293)	NID1 (ENSRROG00000020512)	ENSRROG00000020708	GPR137B (ENSRROG00000022835)	ERO1B (ENSRROG00000035226)	EDARADD (ENSRROG00000041710)	ENSRROG00000020329	LGALS8 (ENSRROG00000036202)	HEATR1 (ENSRROG00000037217)	ACTN2 (ENSRROG00000028335)	MTR (ENSRROG00000022854)	RYR2 (ENSRROG00000040946)	ZP4 (ENSRROG00000027026)
Black snub-nosed monkey	MODERN SPECIES	2308												ENSRBIG00000041951	RBM34 (ENSRBIG00000032900)	ARID4B (ENSRBIG00000042029)	GGPS1 (ENSRBIG00000040380)	TBCE (ENSRBIG00000033206) ##22	B3GALNT2 (ENSRBIG00000029369)	GNG4 (ENSRBIG00000033235)	ENSRBIG00000039113	LYST (ENSRBIG00000014507)	ENSRBIG00000004611	NID1 (ENSRBIG00000028106)	GPR137B (ENSRBIG00000042655)	ERO1B (ENSRBIG00000043925)	ENSRBIG00000026836	EDARADD (ENSRBIG00000039820)	LGALS8 (ENSRBIG00000041075)	HEATR1 (ENSRBIG00000039995)	ENSRBIG00000043115	ACTN2 (ENSRBIG00000038349)	MTR (ENSRBIG00000034565)
Platyrrhini	ANCESTRAL SPECIES	24	ENSGT00390000006176.r	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Cebidae	ANCESTRAL SPECIES	23	ENSGT00390000006176.r	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Cebidae_a	ANCESTRAL SPECIES	11	ENSGT00390000006176.r	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00620000089401	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Bolivian squirrel monkey	MODERN SPECIES	114															GGPS1 (ENSSBOG00000031665)	TBCE (ENSSBOG00000025997) ##22	B3GALNT2 (ENSSBOG00000031055)	GNG4 (ENSSBOG00000012031)	ENSSBOG00000024965	LYST (ENSSBOG00000036277)	NID1 (ENSSBOG00000035580)	GPR137B (ENSSBOG00000029026)	ERO1B (ENSSBOG00000023753)	EDARADD (ENSSBOG00000029351)	LGALS8 (ENSSBOG00000019894)	HEATR1 (ENSSBOG00000033349)	ACTN2 (ENSSBOG00000030830)	MTR (ENSSBOG00000024375)	ENSSBOG00000017446	RYR2 (ENSSBOG00000024698)	ZP4 (ENSSBOG00000028231)
Capuchin	MODERN SPECIES	42	MAP10 (ENSCCAG00000035728)	NTPCR (ENSCCAG00000029274)	PCNX2 (ENSCCAG00000037396)	MAP3K21 (ENSCCAG00000022321)	KCNK1 (ENSCCAG00000016665)	SLC35F3 (ENSCCAG00000027992)	COA6 (ENSCCAG00000024479)	TARBP1 (ENSCCAG00000037278)	IRF2BP2 (ENSCCAG00000033984)	TOMM20 (ENSCCAG00000014510)	RBM34 (ENSCCAG00000025584)	ARID4B (ENSCCAG00000021520)	ENSCCAG00000028837	ENSCCAG00000031672	GGPS1 (ENSCCAG00000023276)	TBCE (ENSCCAG00000022251) ##22	B3GALNT2 (ENSCCAG00000028526)	ENSCCAG00000000751	ENSCCAG00000013133	GNG4 (ENSCCAG00000028828)	LYST (ENSCCAG00000019601)	NID1 (ENSCCAG00000024420)	GPR137B (ENSCCAG00000037952)	ERO1B (ENSCCAG00000033977)	ENSCCAG00000028687	EDARADD (ENSCCAG00000015021)	LGALS8 (ENSCCAG00000025413)	ENSCCAG00000037843	HEATR1 (ENSCCAG00000037071)	ACTN2 (ENSCCAG00000030240)	MTR (ENSCCAG00000024450)
Marmoset	MODERN SPECIES	10	ENSCJAG00000082899	ENSCJAG00000074251	ENSCJAG00000071725	SLC35F3 (ENSCJAG00000018207)	COA6 (ENSCJAG00000018183)	ENSCJAG00000085373	TARBP1 (ENSCJAG00000018155)	IRF2BP2 (ENSCJAG00000018139)	ENSCJAG00000076408	TOMM20 (ENSCJAG00000047923)	RBM34 (ENSCJAG00000018125)	ENSCJAG00000075230	ARID4B (ENSCJAG00000018055)	GGPS1 (ENSCJAG00000018045)	ENSCJAG00000082062	TBCE (ENSCJAG00000018023) ##22	B3GALNT2 (ENSCJAG00000018018)	GNG4 (ENSCJAG00000063269)	ENSCJAG00000078073	LYST (ENSCJAG00000017931)	NID1 (ENSCJAG00000017921)	ENSCJAG00000017900	ERO1B (ENSCJAG00000017881)	EDARADD (ENSCJAG00000047849)	LGALS8 (ENSCJAG00000017839)	HEATR1 (ENSCJAG00000017734)	ACTN2 (ENSCJAG00000017702)	MTR (ENSCJAG00000017612)	RYR2 (ENSCJAG00000017504)	ZP4 (ENSCJAG00000017477)	CHRM3 (ENSCJAG00000017470)
Mas night monkey	MODERN SPECIES	958	SIPA1L2 (ENSANAG00000033139)	MAP10 (ENSANAG00000037242)	NTPCR (ENSANAG00000001717)	PCNX2 (ENSANAG00000036460)	MAP3K21 (ENSANAG00000030901)	KCNK1 (ENSANAG00000034990)	SLC35F3 (ENSANAG00000027066)	COA6 (ENSANAG00000033328)	TARBP1 (ENSANAG00000022031)	IRF2BP2 (ENSANAG00000024218)	TOMM20 (ENSANAG00000033677)	RBM34 (ENSANAG00000029971)	ENSANAG00000019826	ARID4B (ENSANAG00000038088)	GGPS1 (ENSANAG00000028242)	TBCE (ENSANAG00000037588) ##22	ENSANAG00000036876	B3GALNT2 (ENSANAG00000036337)	GNG4 (ENSANAG00000012884)	LYST (ENSANAG00000037136)	NID1 (ENSANAG00000023696)	ENSANAG00000028059	ERO1B (ENSANAG00000023707)	EDARADD (ENSANAG00000036740)	ENSANAG00000032286	LGALS8 (ENSANAG00000027110)	HEATR1 (ENSANAG00000021975)	ACTN2 (ENSANAG00000029101)	MTR (ENSANAG00000036671)	RYR2 (ENSANAG00000030570)
Tarsier	MODERN SPECIES	6514															ENSTSYG00000002673	ENSTSYG00000027644 ##22	GABRG2 (ENSTSYG00000006071)
Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Tree shrew	MODERN SPECIES	3039																ENSTBEG00000001766 ##22
Glires	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Lagomorpha	ANCESTRAL SPECIES	102	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.d	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318
Rabbit	MODERN SPECIES	7	ENSOCUG00000031343	KCNK1 (ENSOCUG00000016003)	ENSOCUG00000004795	ENSOCUG00000006431	ENSOCUG00000022096	SLC35F3 (ENSOCUG00000016017)	ENSOCUG00000017413	TARBP1 (ENSOCUG00000017418)	ENSOCUG00000003968	ENSOCUG00000034600	TOMM20 (ENSOCUG00000021470)	RBM34 (ENSOCUG00000009173)	ARID4B (ENSOCUG00000006605)	GGPS1 (ENSOCUG00000013581)	ENSOCUG00000021833	TBCE (ENSOCUG00000017490) ##22	B3GALNT2 (ENSOCUG00000017502)	ENSOCUG00000006831	ENSOCUG00000032324	LYST (ENSOCUG00000002867)	NID1 (ENSOCUG00000016007)	ENSOCUG00000031699	ENSOCUG00000039549	ENSOCUG00000034412	ENSOCUG00000029742	EXO1 (ENSOCUG00000016157)	ENSOCUG00000026989	OPN3 (ENSOCUG00000007707)	KMO (ENSOCUG00000007699)	ENSOCUG00000021494	RGS7 (ENSOCUG00000011881)
Pika	MODERN SPECIES	484																ENSOPRG00000002457 ##22	ENSOPRG00000002497	ENSOPRG00000002522
Rodentia	ANCESTRAL SPECIES	24	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Rodentia_B	ANCESTRAL SPECIES	32	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Kangaroo rat	MODERN SPECIES	343	Exoc8 (ENSDORG00000026626)	ENSDORG00000006651	Tsnax (ENSDORG00000013537)	Sipa1l2 (ENSDORG00000001369)	Ntpcr (ENSDORG00000014863)	Pcnx2 (ENSDORG00000014864)	Kcnk1 (ENSDORG00000023268)	Slc35f3 (ENSDORG00000007982)	Coa6 (ENSDORG00000025191)	Tarbp1 (ENSDORG00000007984)	ENSDORG00000026942	Tomm20 (ENSDORG00000006418)	Rbm34 (ENSDORG00000006420)	Arid4b (ENSDORG00000006422)	Ggps1 (ENSDORG00000008648)	Tbce (ENSDORG00000008650) ##22	B3galnt2 (ENSDORG00000008655)	Gng4 (ENSDORG00000008640)	Lyst (ENSDORG00000002783)
Myomorpha	ANCESTRAL SPECIES	34	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Lesser Egyptian jerboa	MODERN SPECIES	72	ENSJJAG00000007822	Sipa1l2 (ENSJJAG00000006772)	ENSJJAG00000012997	Ntpcr (ENSJJAG00000021780)	Pcnx2 (ENSJJAG00000018916)	ENSJJAG00000019015	Kcnk1 (ENSJJAG00000019265)	Slc35f3 (ENSJJAG00000022971)	Coa6 (ENSJJAG00000005913)	Tarbp1 (ENSJJAG00000017840)	Irf2bp2 (ENSJJAG00000024254)	Tomm20 (ENSJJAG00000013187)	Rbm34 (ENSJJAG00000021295)	Arid4b (ENSJJAG00000021368)	ENSJJAG00000010664	Tbce (ENSJJAG00000016634) ##22	B3galnt2 (ENSJJAG00000023217)	Gng4 (ENSJJAG00000021565)	Lyst (ENSJJAG00000003513)	Bambi (ENSJJAG00000023950)	Lyzl1 (ENSJJAG00000005043)	Map3k8 (ENSJJAG00000010969)	Mtpap (ENSJJAG00000023931)	Jcad (ENSJJAG00000008684)	Svil (ENSJJAG00000019438)	ENSJJAG00000015366	Zfp438 (ENSJJAG00000024201)	ENSJJAG00000007372	Zeb1 (ENSJJAG00000009716)	ENSJJAG00000016042	Arhgap12 (ENSJJAG00000022673)
Muroidea	ANCESTRAL SPECIES	35	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Northern American deer mouse	MODERN SPECIES	18	Cdk13 (ENSPEMG00000020703)	ENSPEMG00000026169	Sugct (ENSPEMG00000020290)	ENSPEMG00000028161	Inhba (ENSPEMG00000030253)	ENSPEMG00000001076	Gli3 (ENSPEMG00000022194)	ENSPEMG00000011637	ENSPEMG00000026547	AW209491 (ENSPEMG00000016335)	Psma2 (ENSPEMG00000000680)	Mrpl32 (ENSPEMG00000031368)	Hecw1 (ENSPEMG00000023229)	Arid4b (ENSPEMG00000023491)	Ggps1 (ENSPEMG00000020821)	Tbce (ENSPEMG00000020911) ##22	Gng4 (ENSPEMG00000026205)	Lyst (ENSPEMG00000020616)	Nid1 (ENSPEMG00000008596)	Gpr137b (ENSPEMG00000021433)	Ero1b (ENSPEMG00000023632)	Edaradd (ENSPEMG00000024740)	Lgals8 (ENSPEMG00000020715)	Heatr1 (ENSPEMG00000023992)	ENSPEMG00000024563	Actn2 (ENSPEMG00000020936)	Mtr (ENSPEMG00000023424)	Ryr2 (ENSPEMG00000022922)	ENSPEMG00000023885	ENSPEMG00000026690	ENSPEMG00000028432
Prairie vole	MODERN SPECIES	85	Yae1d1 (ENSMOCG00000012487)	Rala (ENSMOCG00000000189)	Cdk13 (ENSMOCG00000018212)	ENSMOCG00000013905	Sugct (ENSMOCG00000021393)	Inhba (ENSMOCG00000001049)	Gli3 (ENSMOCG00000018186)	ENSMOCG00000014175	AW209491 (ENSMOCG00000022967)	ENSMOCG00000013606	Mrpl32 (ENSMOCG00000000157)	Hecw1 (ENSMOCG00000001967)	ENSMOCG00000003914	ENSMOCG00000007240	Ggps1 (ENSMOCG00000018805)	Tbce (ENSMOCG00000009857) ##22	B3galnt2 (ENSMOCG00000000181)	Gng4 (ENSMOCG00000016288)	Lyst (ENSMOCG00000020883)	Nid1 (ENSMOCG00000014455)	Gpr137b (ENSMOCG00000002995)	Ero1b (ENSMOCG00000000371)	Edaradd (ENSMOCG00000019787)	Lgals8 (ENSMOCG00000021322)	ENSMOCG00000016893	Actn2 (ENSMOCG00000000574)	Mtr (ENSMOCG00000007545)	Ryr2 (ENSMOCG00000018140)	ENSMOCG00000012692	ENSMOCG00000021410	Chrm3 (ENSMOCG00000005385)
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Chinese hamster chok1gshd	MODERN SPECIES	317	ENSCGRG00001010504	ENSCGRG00001025025	Yae1d1 (ENSCGRG00001020898)	ENSCGRG00001012449	Cdk13 (ENSCGRG00001020334)	ENSCGRG00001011481	Sugct (ENSCGRG00001009192)	Inhba (ENSCGRG00001019473)	Gli3 (ENSCGRG00001007632)	AW209491 (ENSCGRG00001006859)	Psma2 (ENSCGRG00001023927)	Mrpl32 (ENSCGRG00001016443)	Hecw1 (ENSCGRG00001018493)	Arid4b (ENSCGRG00001014397)	Ggps1 (ENSCGRG00001020297)	Tbce (ENSCGRG00001023614) ##22	B3galnt2 (ENSCGRG00001011516)	Gng4 (ENSCGRG00001003037)	Lyst (ENSCGRG00001018628)	Nid1 (ENSCGRG00001013281)	Gpr137b (ENSCGRG00001015900)	Ero1b (ENSCGRG00001025067)	Edaradd (ENSCGRG00001007181)	Lgals8 (ENSCGRG00001016202)	Heatr1 (ENSCGRG00001020538)	ENSCGRG00001011527	Actn2 (ENSCGRG00001012116)	Mtr (ENSCGRG00001004156)	Ryr2 (ENSCGRG00001003780)	ENSCGRG00001021090	ENSCGRG00001017312
Golden Hamster	MODERN SPECIES	646	Vps41 (ENSMAUG00000018045)	ENSMAUG00000013131	Yae1d1 (ENSMAUG00000015770)	Rala (ENSMAUG00000008652)	Cdk13 (ENSMAUG00000017760)	ENSMAUG00000016486	Sugct (ENSMAUG00000009567)	Inhba (ENSMAUG00000021024)	Gli3 (ENSMAUG00000010007)	AW209491 (ENSMAUG00000007021)	Psma2 (ENSMAUG00000009719)	Mrpl32 (ENSMAUG00000019188)	Hecw1 (ENSMAUG00000003157)	ENSMAUG00000012797	ENSMAUG00000021330	Tbce (ENSMAUG00000013936) ##22	B3galnt2 (ENSMAUG00000013962)	Gng4 (ENSMAUG00000011229)	Lyst (ENSMAUG00000001405)	Nid1 (ENSMAUG00000002084)	Gpr137b (ENSMAUG00000007847)	Ero1b (ENSMAUG00000003884)	Edaradd (ENSMAUG00000009216)	Lgals8 (ENSMAUG00000009404)	ENSMAUG00000019108	ENSMAUG00000012948	Mtr (ENSMAUG00000014952)	Ryr2 (ENSMAUG00000021608)	Zp4 (ENSMAUG00000006040)	ENSMAUG00000009315	Chrm3 (ENSMAUG00000006959)
Murinae	ANCESTRAL SPECIES	27	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Mus	ANCESTRAL SPECIES	18	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000168709	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996.db	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000168709	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996.db	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000168709	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942
Mouse	MODERN SPECIES	4	Vps41 (ENSMUSG00000041236)	Pou6f2 (ENSMUSG00000009734)	Yae1d1 (ENSMUSG00000075054)	Rala (ENSMUSG00000008859)	Cdk13 (ENSMUSG00000041297)	Mplkip (ENSMUSG00000012429)	Sugct (ENSMUSG00000055137)	Inhba (ENSMUSG00000041324)	Gli3 (ENSMUSG00000021318)	AW209491 (ENSMUSG00000039182)	Psma2 (ENSMUSG00000015671)	Mrpl32 (ENSMUSG00000015672)	Hecw1 (ENSMUSG00000021301)	Arid4b (ENSMUSG00000039219)	Ggps1 (ENSMUSG00000021302)	Tbce (ENSMUSG00000039233) ##22	B3galnt2 (ENSMUSG00000039242)	Gng4 (ENSMUSG00000021303)	Lyst (ENSMUSG00000019726)	Nid1 (ENSMUSG00000005397)	Gpr137b (ENSMUSG00000021306)	Prl2c5 (ENSMUSG00000055360)	Prl2c2 (ENSMUSG00000079092)	Prl2c3 (ENSMUSG00000056457)	Ero1b (ENSMUSG00000057069)	Edaradd (ENSMUSG00000095105)	Lgals8 (ENSMUSG00000057554)	Heatr1 (ENSMUSG00000050244)	Actn2 (ENSMUSG00000052374)	Mtr (ENSMUSG00000021311)	Ryr2 (ENSMUSG00000021313)
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000000481	ENSGT00940000156175	ENSGT00390000011176	ENSGT00940000155142	ENSGT00940000157852	ENSGT00390000002582	ENSGT00940000157866	ENSGT00940000157116	ENSGT00940000155925	ENSGT00390000014722	ENSGT00550000074870.b	ENSGT00390000014996.db	ENSGT00940000158294	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000168709	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019107	Vps41 (MGP_SPRETEiJ_G0019106)	Pou6f2 (MGP_SPRETEiJ_G0019105)	Yae1d1 (MGP_SPRETEiJ_G0019104)	Rala (MGP_SPRETEiJ_G0019103)	Cdk13 (MGP_SPRETEiJ_G0019102)	MGP_SPRETEiJ_G0019101	Inhba (MGP_SPRETEiJ_G0019100)	Gli3 (MGP_SPRETEiJ_G0019099)	AW209491 (MGP_SPRETEiJ_G0019098)	Psma2 (MGP_SPRETEiJ_G0019097)	Mrpl32 (MGP_SPRETEiJ_G0019096)	Hecw1 (MGP_SPRETEiJ_G0019095)	Arid4b (MGP_SPRETEiJ_G0019094)	MGP_SPRETEiJ_G0019093	Tbce (MGP_SPRETEiJ_G0019092) ##22	B3galnt2 (MGP_SPRETEiJ_G0019091)	MGP_SPRETEiJ_G0019090	Gng4 (MGP_SPRETEiJ_G0019089)	Lyst (MGP_SPRETEiJ_G0019088)	MGP_SPRETEiJ_G0019087	Nid1 (MGP_SPRETEiJ_G0019086)	Gpr137b (MGP_SPRETEiJ_G0019085)	Ero1b (MGP_SPRETEiJ_G0019084)	Edaradd (MGP_SPRETEiJ_G0019083)	Lgals8 (MGP_SPRETEiJ_G0019082)	Heatr1 (MGP_SPRETEiJ_G0019081)	Actn2 (MGP_SPRETEiJ_G0019080)	Mtr (MGP_SPRETEiJ_G0019079)	Ryr2 (MGP_SPRETEiJ_G0019078)	Chrm3 (MGP_SPRETEiJ_G0019077)
Steppe mouse	MODERN SPECIES	35												Hecw1 (ENSMSIG00000017159)	ENSMSIG00000017216	Arid4b (ENSMSIG00000017230)	Ggps1 (ENSMSIG00000017308)	Tbce (ENSMSIG00000017330) ##22	B3galnt2 (ENSMSIG00000017362)	ENSMSIG00000017641	Gng4 (ENSMSIG00000017646)
Ryukyu mouse	MODERN SPECIES	4	Pou6f2 (MGP_CAROLIEiJ_G0018249)	Yae1d1 (MGP_CAROLIEiJ_G0018248)	Rala (MGP_CAROLIEiJ_G0018247)	Cdk13 (MGP_CAROLIEiJ_G0018246)	MGP_CAROLIEiJ_G0018245	MGP_CAROLIEiJ_G0018244	Sugct (MGP_CAROLIEiJ_G0018243)	Inhba (MGP_CAROLIEiJ_G0018242)	Gli3 (MGP_CAROLIEiJ_G0018241)	AW209491 (MGP_CAROLIEiJ_G0018240)	Psma2 (MGP_CAROLIEiJ_G0018239)	Mrpl32 (MGP_CAROLIEiJ_G0018238)	Hecw1 (MGP_CAROLIEiJ_G0018237)	Arid4b (MGP_CAROLIEiJ_G0018236)	Ggps1 (MGP_CAROLIEiJ_G0018235)	Tbce (MGP_CAROLIEiJ_G0018234) ##22	MGP_CAROLIEiJ_G0018233	B3galnt2 (MGP_CAROLIEiJ_G0018232)	Gng4 (MGP_CAROLIEiJ_G0018231)	Lyst (MGP_CAROLIEiJ_G0018230)	MGP_CAROLIEiJ_G0018229	Nid1 (MGP_CAROLIEiJ_G0018228)	Gpr137b (MGP_CAROLIEiJ_G0018227)	Ero1b (MGP_CAROLIEiJ_G0018226)	Edaradd (MGP_CAROLIEiJ_G0018225)	Lgals8 (MGP_CAROLIEiJ_G0018224)	Heatr1 (MGP_CAROLIEiJ_G0018223)	Actn2 (MGP_CAROLIEiJ_G0018222)	Mtr (MGP_CAROLIEiJ_G0018221)	Ryr2 (MGP_CAROLIEiJ_G0018220)	Chrm3 (MGP_CAROLIEiJ_G0018219)
Rat	MODERN SPECIES	8	Cdk13 (ENSRNOG00000013620)	Mplkip (ENSRNOG00000013806)	Sugct (ENSRNOG00000066247)	Inhba (ENSRNOG00000014320)	Gli3 (ENSRNOG00000014395)	Psme1-ps1 (ENSRNOG00000061359)	Gabpb1l (ENSRNOG00000053439)	RGD1308147 (ENSRNOG00000015523)	Psma2 (ENSRNOG00000049920)	Mrpl32 (ENSRNOG00000015989)	Hecw1 (ENSRNOG00000016046)	Rbbp4-ps2 (ENSRNOG00000021292)	ENSRNOG00000064563	Arid4b (ENSRNOG00000016391)	Ggps1 (ENSRNOG00000016767)	Tbce (ENSRNOG00000029667) ##22	B3galnt2 (ENSRNOG00000016855)	Kif5b (ENSRNOG00000017466)	Arhgap12 (ENSRNOG00000017791)	Zeb1 (ENSRNOG00000017863)	ENSRNOG00000067560	Zfp438 (ENSRNOG00000028329)	LOC103694107 (ENSRNOG00000063738)	Svil (ENSRNOG00000018110)	Jcad (ENSRNOG00000027938)	Mtpap (ENSRNOG00000016578)	Map3k8 (ENSRNOG00000016378)	Lyzl1 (ENSRNOG00000016295)	Bambi (ENSRNOG00000016066)	RGD1564129 (ENSRNOG00000063038)	Cul2 (ENSRNOG00000015292)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1358									ENSNGAG00000010757	Tarbp1 (ENSNGAG00000012556)	Irf2bp2 (ENSNGAG00000001609)	ENSNGAG00000003493	Rbm34 (ENSNGAG00000010712)	Arid4b (ENSNGAG00000014629)	Ggps1 (ENSNGAG00000020240)	Tbce (ENSNGAG00000020833) ##22	B3galnt2 (ENSNGAG00000008261)	Gng4 (ENSNGAG00000004691)	Lyst (ENSNGAG00000014639)	Nid1 (ENSNGAG00000023816)
Rodentia_A	ANCESTRAL SPECIES	25	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Hystricomorpha	ANCESTRAL SPECIES	52	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942	ENSGT00950000182997.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	45	ENSGT00940000153568.A.f	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942	ENSGT00950000182997.a.a
Hystricomorpha_b	ANCESTRAL SPECIES	42	ENSGT00940000153568.A.f	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942	ENSGT00950000182997.a.a
Degu	MODERN SPECIES	168	PCNX2 (ENSODEG00000004978)	MAP3K21 (ENSODEG00000006318)	KCNK1 (ENSODEG00000006201)	ENSODEG00000019357	SLC35F3 (ENSODEG00000005836)	ENSODEG00000005008	TARBP1 (ENSODEG00000005238)	ENSODEG00000007350	IRF2BP2 (ENSODEG00000007656)	ENSODEG00000005252	RBM34 (ENSODEG00000006130)	ARID4B (ENSODEG00000005373)	ENSODEG00000006205	ENSODEG00000006253	ENSODEG00000007467	TBCE (ENSODEG00000007759) ##22	ENSODEG00000006722	GNG4 (ENSODEG00000005790)	LYST (ENSODEG00000005832)	NID1 (ENSODEG00000007141)	GPR137B (ENSODEG00000005781)	ERO1B (ENSODEG00000005305)	EDARADD (ENSODEG00000008012)	LGALS8 (ENSODEG00000006705)	ENSODEG00000006801	ENSODEG00000005900	ACTN2 (ENSODEG00000006161)	MTR (ENSODEG00000006892)	ENSODEG00000019218	RYR2 (ENSODEG00000006341)
Long-tailed chinchilla	MODERN SPECIES	199	TSNAX (ENSCLAG00000004894)	DISC1 (ENSCLAG00000004662)	SIPA1L2 (ENSCLAG00000004244)	NTPCR (ENSCLAG00000004088)	PCNX2 (ENSCLAG00000003984)	MAP3K21 (ENSCLAG00000003881)	KCNK1 (ENSCLAG00000003836)	SLC35F3 (ENSCLAG00000003795)	ENSCLAG00000003766	TARBP1 (ENSCLAG00000003655)	IRF2BP2 (ENSCLAG00000003611)	ENSCLAG00000003558	RBM34 (ENSCLAG00000003464)	ARID4B (ENSCLAG00000003255)	GGPS1 (ENSCLAG00000003159)	TBCE (ENSCLAG00000003096) ##22	B3GALNT2 (ENSCLAG00000003046)	GNG4 (ENSCLAG00000003009)	ENSCLAG00000010780	LYST (ENSCLAG00000009899)	NID1 (ENSCLAG00000009631)	GPR137B (ENSCLAG00000009487)	ERO1B (ENSCLAG00000017322)	EDARADD (ENSCLAG00000016588)	LGALS8 (ENSCLAG00000017295)	HEATR1 (ENSCLAG00000016900)	ACTN2 (ENSCLAG00000016616)	MTR (ENSCLAG00000016630)	RYR2 (ENSCLAG00000012293)	ENSCLAG00000011740	CHRM3 (ENSCLAG00000017786)
Guinea pig	MODERN SPECIES	16	ENSCPOG00000024067	TSNAX (ENSCPOG00000036257)	DISC1 (ENSCPOG00000013230)	SIPA1L2 (ENSCPOG00000000466)	NTPCR (ENSCPOG00000008589)	PCNX2 (ENSCPOG00000008593)	MAP3K21 (ENSCPOG00000003876)	KCNK1 (ENSCPOG00000001069)	SLC35F3 (ENSCPOG00000013991)	ENSCPOG00000030904	TARBP1 (ENSCPOG00000013995)	ENSCPOG00000015211	RBM34 (ENSCPOG00000015213)	ARID4B (ENSCPOG00000034766)	GGPS1 (ENSCPOG00000030797)	TBCE (ENSCPOG00000014190) ##22	B3GALNT2 (ENSCPOG00000014195)	GNG4 (ENSCPOG00000038993)	LYST (ENSCPOG00000011468)	NID1 (ENSCPOG00000014654)	GPR137B (ENSCPOG00000012635)	ERO1B (ENSCPOG00000006615)	EDARADD (ENSCPOG00000026728)	LGALS8 (ENSCPOG00000009849)	HEATR1 (ENSCPOG00000008331)	ACTN2 (ENSCPOG00000013969)	MTR (ENSCPOG00000015171)	RYR2 (ENSCPOG00000007936)	Chrm3 (ENSCPOG00000022537)	ZMYND11 (ENSCPOG00000012674)	DIP2C (ENSCPOG00000000562)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	28	NTPCR (ENSHGLG00000040929)	PCNX2 (ENSHGLG00000013796)	MAP3K21 (ENSHGLG00000018159)	ENSHGLG00000011707	KCNK1 (ENSHGLG00000015891)	ENSHGLG00000034501	SLC35F3 (ENSHGLG00000049707)	ENSHGLG00000012375	TARBP1 (ENSHGLG00000011592)	ENSHGLG00000009866	ENSHGLG00000037951	ENSHGLG00000016770	RBM34 (ENSHGLG00000016495)	ARID4B (ENSHGLG00000012546)	GGPS1 (ENSHGLG00000020898)	ENSHGLG00000019008 ##22	ENSHGLG00000006905	ENSHGLG00000016198	ENSHGLG00000039942	GNG4 (ENSHGLG00000037464)	LYST (ENSHGLG00000015493)	NID1 (ENSHGLG00000017135)	GPR137B (ENSHGLG00000015957)	ERO1B (ENSHGLG00000018091)	EDARADD (ENSHGLG00000043766)	LGALS8 (ENSHGLG00000016074)	HEATR1 (ENSHGLG00000016543)	ENSHGLG00000016129	ENSHGLG00000034223	ENSHGLG00000009879	ENSHGLG00000009800
Naked mole-rat female	MODERN SPECIES	11	ENSHGLG00000013354	ZDHHC23 (ENSHGLG00000047482)	GRAMD1C (ENSHGLG00000016163)	ENSHGLG00000050407	ATP6V1A (ENSHGLG00000012241)	NAA50 (ENSHGLG00000050182)	USF3 (ENSHGLG00000049683)	ENSHGLG00000050610	SIDT1 (ENSHGLG00000012121)	SPICE1 (ENSHGLG00000013844)	CFAP44 (ENSHGLG00000016857)	BOC (ENSHGLG00000016908)	NEPRO (ENSHGLG00000018829)	GTPBP8 (ENSHGLG00000018819)	ENSHGLG00000018706	ENSHGLG00000039135 ##22	ENSHGLG00000018701	ENSHGLG00000017568	CCDC80 (ENSHGLG00000010040)	ENSHGLG00000010696	SLC35A5 (ENSHGLG00000011730)	ENSHGLG00000012925	ENSHGLG00000035571	BTLA (ENSHGLG00000017114)	CD200 (ENSHGLG00000038122)	SLC9C1 (ENSHGLG00000017598)	GCSAM (ENSHGLG00000050803)	ENSHGLG00000011603	TMPRSS7 (ENSHGLG00000012870)	TAGLN3 (ENSHGLG00000011857)	ABHD10 (ENSHGLG00000012170)
Sciuridae	ANCESTRAL SPECIES		ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000156942
Marmotini	ANCESTRAL SPECIES	55	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT00950000183128.B.z.b	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Marmotini_b	ANCESTRAL SPECIES	15	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT00950000183128.B.z.b	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000160084	ENSGT00940000156942
Squirrel	MODERN SPECIES	84	TSNAX (ENSSTOG00000024989)	ENSSTOG00000023596	SIPA1L2 (ENSSTOG00000021559)	NTPCR (ENSSTOG00000028538)	PCNX2 (ENSSTOG00000016530)	MAP3K21 (ENSSTOG00000027529)	KCNK1 (ENSSTOG00000001207)	SLC35F3 (ENSSTOG00000014646)	ENSSTOG00000023911	TARBP1 (ENSSTOG00000032291)	IRF2BP2 (ENSSTOG00000014666)	TOMM20 (ENSSTOG00000027564)	RBM34 (ENSSTOG00000002792)	ARID4B (ENSSTOG00000002810)	GGPS1 (ENSSTOG00000004263)	TBCE (ENSSTOG00000015698) ##22	B3GALNT2 (ENSSTOG00000015705)	ENSSTOG00000020260	ENSSTOG00000030497	GNG4 (ENSSTOG00000015712)	LYST (ENSSTOG00000015713)	NID1 (ENSSTOG00000015736)	GPR137B (ENSSTOG00000013802)	ERO1B (ENSSTOG00000013810)	EDARADD (ENSSTOG00000022830)	LGALS8 (ENSSTOG00000007266)	HEATR1 (ENSSTOG00000007293)	ACTN2 (ENSSTOG00000007354)	MTR (ENSSTOG00000004093)	RYR2 (ENSSTOG00000014690)	CHRM3 (ENSSTOG00000021752)
Arctic ground squirrel	MODERN SPECIES	17	TSNAX (ENSUPAG00010021601)	DISC1 (ENSUPAG00010021561)	SIPA1L2 (ENSUPAG00010021526)	NTPCR (ENSUPAG00010021487)	PCNX2 (ENSUPAG00010021456)	MAP3K21 (ENSUPAG00010021445)	KCNK1 (ENSUPAG00010021440)	SLC35F3 (ENSUPAG00010021437)	ENSUPAG00010021434	TARBP1 (ENSUPAG00010021424)	IRF2BP2 (ENSUPAG00010021413)	ENSUPAG00010021396	RBM34 (ENSUPAG00010021384)	ARID4B (ENSUPAG00010021312)	GGPS1 (ENSUPAG00010021295)	TBCE (ENSUPAG00010021272) ##22	B3GALNT2 (ENSUPAG00010021217)	ENSUPAG00010021184	GNG4 (ENSUPAG00010021177)	ENSUPAG00010021171	LYST (ENSUPAG00010021128)	NID1 (ENSUPAG00010021109)	GPR137B (ENSUPAG00010021079)	ERO1B (ENSUPAG00010021030)	EDARADD (ENSUPAG00010021013)	LGALS8 (ENSUPAG00010020959)	HEATR1 (ENSUPAG00010020924)	ACTN2 (ENSUPAG00010020890)	MTR (ENSUPAG00010020847)	RYR2 (ENSUPAG00010020539)	ZP4 (ENSUPAG00010020317)
Alpin marmot	MODERN SPECIES	91	ENSMMMG00000012567	ENSMMMG00000012575	DISC1 (ENSMMMG00000012596)	SIPA1L2 (ENSMMMG00000015639)	ENSMMMG00000015756	NTPCR (ENSMMMG00000015759)	PCNX2 (ENSMMMG00000015768)	MAP3K21 (ENSMMMG00000015822)	KCNK1 (ENSMMMG00000015874)	SLC35F3 (ENSMMMG00000015878)	ENSMMMG00000015889	TARBP1 (ENSMMMG00000015900)	TOMM20 (ENSMMMG00000016144)	RBM34 (ENSMMMG00000016155)	ARID4B (ENSMMMG00000016179)	TBCE (ENSMMMG00000016287) ##22	B3GALNT2 (ENSMMMG00000016298)	ENSMMMG00000016324	GNG4 (ENSMMMG00000016336)	LYST (ENSMMMG00000016348)	NID1 (ENSMMMG00000016406)	ENSMMMG00000018084	ENSMMMG00000018089	ERO1B (ENSMMMG00000018104)	ENSMMMG00000018111	EDARADD (ENSMMMG00000018120)	LGALS8 (ENSMMMG00000018132)	HEATR1 (ENSMMMG00000018172)	ACTN2 (ENSMMMG00000018231)	MTR (ENSMMMG00000018283)	RYR2 (ENSMMMG00000018364)
Eurasian red squirrel	MODERN SPECIES	3	SIPA1L2 (ENSSVLG00005011103)	ENSSVLG00005011585	ENSSVLG00005011681	ENSSVLG00005011726	MAP3K21 (ENSSVLG00005011781)	KCNK1 (ENSSVLG00005011923)	SLC35F3 (ENSSVLG00005011983)	ENSSVLG00005012181	TARBP1 (ENSSVLG00005012318)	IRF2BP2 (ENSSVLG00005013009)	ENSSVLG00005013106	RBM34 (ENSSVLG00005013229)	ENSSVLG00005013591	ENSSVLG00005013692	ENSSVLG00005013782	TBCE (ENSSVLG00005013938) ##22	B3GALNT2 (ENSSVLG00005014196)	ENSSVLG00005014340	GNG4 (ENSSVLG00005014355)	LYST (ENSSVLG00005014429)	NID1 (ENSSVLG00005015084)	GPR137B (ENSSVLG00005015174)	ERO1B (ENSSVLG00005015220)	EDARADD (ENSSVLG00005015271)	LGALS8 (ENSSVLG00005015486)	HEATR1 (ENSSVLG00005015652)	ACTN2 (ENSSVLG00005015780)	MTR (ENSSVLG00005015899)	RYR2 (ENSSVLG00005016015)	ZP4 (ENSSVLG00005016883)	ENSSVLG00005017049
Laurasiatheria	ANCESTRAL SPECIES	28	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Eulipotyphla	ANCESTRAL SPECIES	959																ENSGT00530000063405.a ##22	ENSGT00940000156562
Hedgehog	MODERN SPECIES	1861																TBCE (ENSEEUG00000003832) ##22	ENSEEUG00000003955
Common shrew	MODERN SPECIES	1305																TBCE (ENSSARG00000013738) ##22	B3GALNT2 (ENSSARG00000013750)
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Suina	ANCESTRAL SPECIES	6	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Pig	MODERN SPECIES	5	SIPA1L2 (ENSSSCG00000010169)	MAP10 (ENSSSCG00000010167)	NTPCR (ENSSSCG00000010166)	ENSSSCG00000010165	MAP3K21 (ENSSSCG00000010164)	KCNK1 (ENSSSCG00000010163)	SLC35F3 (ENSSSCG00000010162)	ENSSSCG00000010161	TARBP1 (ENSSSCG00000010160)	IRF2BP2 (ENSSSCG00000038132)	TOMM20 (ENSSSCG00000010158)	RBM34 (ENSSSCG00000055425)	ARID4B (ENSSSCG00000060488)	GGPS1 (ENSSSCG00000031680)	ENSSSCG00000057214	TBCE (ENSSSCG00000034844) ##22	ENSSSCG00000061082	B3GALNT2 (ENSSSCG00000033692)	GNG4 (ENSSSCG00000033307)	LYST (ENSSSCG00000010151)	NID1 (ENSSSCG00000026819)	GPR137B (ENSSSCG00000038853)	ERO1B (ENSSSCG00000010148)	EDARADD (ENSSSCG00000025986)	LGALS8 (ENSSSCG00000010146)	HEATR1 (ENSSSCG00000010145)	ACTN2 (ENSSSCG00000010144)	MTR (ENSSSCG00000010143)	RYR2 (ENSSSCG00000010142)	ZP4 (ENSSSCG00000010141)	ENSSSCG00000041446
Chacoan peccary	MODERN SPECIES	975	SIPA1L2 (ENSCWAG00000017097)	MAP10 (ENSCWAG00000017340)	NTPCR (ENSCWAG00000017373)	PCNX2 (ENSCWAG00000017422)	MAP3K21 (ENSCWAG00000017800)	KCNK1 (ENSCWAG00000017940)	SLC35F3 (ENSCWAG00000017969)	ENSCWAG00000018078	TARBP1 (ENSCWAG00000018105)	ENSCWAG00000018155	IRF2BP2 (ENSCWAG00000018181)	ENSCWAG00000018217	RBM34 (ENSCWAG00000018240)	ARID4B (ENSCWAG00000018281)	GGPS1 (ENSCWAG00000018324)	TBCE (ENSCWAG00000018356) ##22	B3GALNT2 (ENSCWAG00000018504)	GNG4 (ENSCWAG00000018536)	LYST (ENSCWAG00000018583)	NID1 (ENSCWAG00000018873)	GPR137B (ENSCWAG00000018939)	ERO1B (ENSCWAG00000018960)	EDARADD (ENSCWAG00000018986)	LGALS8 (ENSCWAG00000019096)	HEATR1 (ENSCWAG00000019211)	ACTN2 (ENSCWAG00000019345)	MTR (ENSCWAG00000019533)	RYR2 (ENSCWAG00000019790)	ENSCWAG00000020064	ZP4 (ENSCWAG00000020073)	ENSCWAG00000020095
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Camelidae	ANCESTRAL SPECIES	105											ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00940000156562	ENSGT00530000063405.a ##22	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Arabian camel	DUPLICATION
Arabian camel	MODERN SPECIES	2	URB2 (ENSCDRG00005014428)	TAF5L (ENSCDRG00005014497)	ABCB10 (ENSCDRG00005014571)	NUP133 (ENSCDRG00005014682)	ENSCDRG00005014779	ENSCDRG00005014984	RHOU (ENSCDRG00005015120)	ENSCDRG00005015134	ENSCDRG00005006671	ENSCDRG00005006737	IRF2BP2 (ENSCDRG00005006772)	ENSCDRG00005006836	RBM34 (ENSCDRG00005006895)	ARID4B (ENSCDRG00005006968)	GGPS1 (ENSCDRG00005007164)	ENSCDRG00005007219 ##22	ENSCDRG00005007815	GNG4 (ENSCDRG00005007835)	ENSCDRG00005007872	NID1 (ENSCDRG00005007906)	GPR137B (ENSCDRG00005008022)	ERO1B (ENSCDRG00005008068)	EDARADD (ENSCDRG00005008346)	LGALS8 (ENSCDRG00005008412)	ENSCDRG00005008573	ENSCDRG00005008659	ACTN2 (ENSCDRG00005008706)	MTR (ENSCDRG00005009139)	RYR2 (ENSCDRG00005010146)	ZP4 (ENSCDRG00005016154)	CHRM3 (ENSCDRG00005016235)
Arabian camel	MODERN SPECIES	21	CPNE3 (ENSCDRG00005017793)	CNGB3 (ENSCDRG00005017849)	ENSCDRG00005017946	MMP16 (ENSCDRG00005017987)	ENSCDRG00005018022	ENSCDRG00005018045	RIPK2 (ENSCDRG00005018065)	ENSCDRG00005018102	ENSCDRG00005018116	OSGIN2 (ENSCDRG00005018136)	NBN (ENSCDRG00005018199)	DECR1 (ENSCDRG00005018340)	CALB1 (ENSCDRG00005018409)	ENSCDRG00005018459	ENSCDRG00005018476	ENSCDRG00005018568 ##22
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000021874	DISC1 (ENSCHYG00000021661)	SIPA1L2 (ENSCHYG00000020978)	MAP10 (ENSCHYG00000020916)	NTPCR (ENSCHYG00000020800)	PCNX2 (ENSCHYG00000020126)	MAP3K21 (ENSCHYG00000020014)	KCNK1 (ENSCHYG00000019984)	SLC35F3 (ENSCHYG00000019811)	ENSCHYG00000019754	TARBP1 (ENSCHYG00000019455)	ENSCHYG00000019328	ENSCHYG00000019082	ARID4B (ENSCHYG00000018925)	GGPS1 (ENSCHYG00000018859)	TBCE (ENSCHYG00000018284) ##22	B3GALNT2 (ENSCHYG00000017928)	GNG4 (ENSCHYG00000017866)	LYST (ENSCHYG00000017624)	NID1 (ENSCHYG00000016716)	GPR137B (ENSCHYG00000016532)	ERO1B (ENSCHYG00000016281)	EDARADD (ENSCHYG00000016052)	LGALS8 (ENSCHYG00000015624)	HEATR1 (ENSCHYG00000015016)	ACTN2 (ENSCHYG00000014774)	MTR (ENSCHYG00000013845)	RYR2 (ENSCHYG00000012734)	ZP4 (ENSCHYG00000012596)	CHRM3 (ENSCHYG00000012564)	ENSCHYG00000012519
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Bovidae	ANCESTRAL SPECIES	27	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Caprinae	ANCESTRAL SPECIES	26	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00950000182994.B.a.b.e.a.a.a	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Rambouillet Sheep	MODERN SPECIES	17	MAP10 (ENSOARG00020014059)	NTPCR (ENSOARG00020014081)	ENSOARG00020014283	MAP3K21 (ENSOARG00020014333)	ENSOARG00020014471	KCNK1 (ENSOARG00020014578)	SLC35F3 (ENSOARG00020014634)	ENSOARG00020014831	TARBP1 (ENSOARG00020014895)	ENSOARG00020015422	IRF2BP2 (ENSOARG00020015445)	TOMM20 (ENSOARG00020015523)	ENSOARG00020015590	ARID4B (ENSOARG00020015673)	GGPS1 (ENSOARG00020016218)	TBCE (ENSOARG00020016274) ##22	B3GALNT2 (ENSOARG00020016542)	ENSOARG00020016607	GNG4 (ENSOARG00020016634)	LYST (ENSOARG00020016708)	NID1 (ENSOARG00020017963)	GPR137B (ENSOARG00020018310)	ERO1B (ENSOARG00020018369)	EDARADD (ENSOARG00020018503)	LGALS8 (ENSOARG00020018619)	HEATR1 (ENSOARG00020018840)	ACTN2 (ENSOARG00020019247)	MTR (ENSOARG00020019401)	RYR2 (ENSOARG00020019907)	ENSOARG00020020560	ZP4 (ENSOARG00020020715)
Goat	MODERN SPECIES	20	SIPA1L2 (ENSCHIG00000023959)	MAP10 (ENSCHIG00000005553)	NTPCR (ENSCHIG00000011997)	PCNX2 (ENSCHIG00000021717)	MAP3K21 (ENSCHIG00000015700)	ENSCHIG00000015944	KCNK1 (ENSCHIG00000026110)	SLC35F3 (ENSCHIG00000016638)	ENSCHIG00000025782	TARBP1 (ENSCHIG00000011437)	IRF2BP2 (ENSCHIG00000011687)	TOMM20 (ENSCHIG00000007684)	ENSCHIG00000020834	ARID4B (ENSCHIG00000020742)	GGPS1 (ENSCHIG00000015587)	TBCE (ENSCHIG00000019154) ##22	B3GALNT2 (ENSCHIG00000010826)	GNG4 (ENSCHIG00000000426)	LYST (ENSCHIG00000000114)	NID1 (ENSCHIG00000020764)	GPR137B (ENSCHIG00000011808)	ERO1B (ENSCHIG00000019035)	EDARADD (ENSCHIG00000011262)	LGALS8 (ENSCHIG00000022419)	HEATR1 (ENSCHIG00000022619)	ACTN2 (ENSCHIG00000010063)	MTR (ENSCHIG00000000324)	RYR2 (ENSCHIG00000027015)	ZP4 (ENSCHIG00000026306)	ENSCHIG00000008232	CHRM3 (ENSCHIG00000011236)
Bovinae	ANCESTRAL SPECIES	30	ENSGT00940000163089.b.x.b.b.d	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094.e	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Bos	ANCESTRAL SPECIES	27	ENSGT00940000163089.b.x.b.b.c	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094.e	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845.vb.b	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Bos_a	ANCESTRAL SPECIES	25	ENSGT00940000163089.b.x.b.b.c	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094.e	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845.vb.b	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Domestic yak	MODERN SPECIES	19	SIPA1L2 (ENSBGRG00000019189)	ENSBGRG00000019690	MAP10 (ENSBGRG00000019709)	NTPCR (ENSBGRG00000019746)	MAP3K21 (ENSBGRG00000019839)	KCNK1 (ENSBGRG00000020051)	SLC35F3 (ENSBGRG00000017066)	ENSBGRG00000017364	TARBP1 (ENSBGRG00000017458)	IRF2BP2 (ENSBGRG00000018052)	TOMM20 (ENSBGRG00000018139)	ENSBGRG00000018252	ARID4B (ENSBGRG00000018433)	ENSBGRG00000018542	GGPS1 (ENSBGRG00000018567)	TBCE (ENSBGRG00000018596) ##22	B3GALNT2 (ENSBGRG00000018848)	GNG4 (ENSBGRG00000018930)	LYST (ENSBGRG00000018992)	NID1 (ENSBGRG00000019277)	GPR137B (ENSBGRG00000019873)	ERO1B (ENSBGRG00000019978)	EDARADD (ENSBGRG00000020072)	LGALS8 (ENSBGRG00000020252)	HEATR1 (ENSBGRG00000020440)	ACTN2 (ENSBGRG00000020777)	ENSBGRG00000021207	MTR (ENSBGRG00000021300)	RYR2 (ENSBGRG00000022389)	ZP4 (ENSBGRG00000022990)	ENSBGRG00000023764
Wild yak	MODERN SPECIES	1803															GGPS1 (ENSBMUG00000009205)	TBCE (ENSBMUG00000009201) ##22	B3GALNT2 (ENSBMUG00000009168)	GNG4 (ENSBMUG00000009155)	LYST (ENSBMUG00000009118)	NID1 (ENSBMUG00000009059)
Bos_b	ANCESTRAL SPECIES	32	ENSGT00940000163089.b.x.b.b.c	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094.e	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.a.a.a	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845.vb.b	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Cow	MODERN SPECIES	20	ENSBTAG00000049681	MAP10 (ENSBTAG00000012566)	NTPCR (ENSBTAG00000013935)	PCNX2 (ENSBTAG00000000535)	MAP3K21 (ENSBTAG00000021183)	KCNK1 (ENSBTAG00000004515)	SLC35F3 (ENSBTAG00000020361)	COA6 (ENSBTAG00000051467)	TARBP1 (ENSBTAG00000004517)	IRF2BP2 (ENSBTAG00000046841)	TOMM20 (ENSBTAG00000000562)	RBM34 (ENSBTAG00000000221)	ARID4B (ENSBTAG00000000222)	ENSBTAG00000048382	GGPS1 (ENSBTAG00000013068)	TBCE (ENSBTAG00000013735) ##22	B3GALNT2 (ENSBTAG00000013750)	GNG4 (ENSBTAG00000002908)	LYST (ENSBTAG00000016804)	NID1 (ENSBTAG00000007244)	GPR137B (ENSBTAG00000000830)	ERO1B (ENSBTAG00000034633)	EDARADD (ENSBTAG00000044197)	LGALS8 (ENSBTAG00000013544)	HEATR1 (ENSBTAG00000044100)	ACTN2 (ENSBTAG00000009696)	MTR (ENSBTAG00000012251)	RYR2 (ENSBTAG00000022886)	ZP4 (ENSBTAG00000026085)	ENSBTAG00000050677	CHRM3 (ENSBTAG00000008059)
Hybrid Bos Indicus	MODERN SPECIES	20	MAP10 (ENSBIXG00005024349)	ENSBIXG00005004157	ENSBIXG00005024289	ENSBIXG00005024267	MAP3K21 (ENSBIXG00005024232)	KCNK1 (ENSBIXG00005004127)	SLC35F3 (ENSBIXG00005024093)	ENSBIXG00005024060	TARBP1 (ENSBIXG00005024002)	IRF2BP2 (ENSBIXG00005023732)	TOMM20 (ENSBIXG00005006903)	ENSBIXG00005007175	ARID4B (ENSBIXG00005023642)	ENSBIXG00005023594	GGPS1 (ENSBIXG00005007387)	TBCE (ENSBIXG00005023543) ##22	B3GALNT2 (ENSBIXG00005023466)	ENSBIXG00005023436	GNG4 (ENSBIXG00005023426)	ENSBIXG00005023397	LYST (ENSBIXG00005023324)	NID1 (ENSBIXG00005023224)	GPR137B (ENSBIXG00005023081)	ERO1B (ENSBIXG00005023032)	EDARADD (ENSBIXG00005006469)	LGALS8 (ENSBIXG00005022890)	HEATR1 (ENSBIXG00005022729)	ACTN2 (ENSBIXG00005022662)	MTR (ENSBIXG00005003850)	ENSBIXG00005022537	RYR2 (ENSBIXG00005022489)
American bison	MODERN SPECIES	3322							KCNK1 (ENSBBBG00000012192)	SLC35F3 (ENSBBBG00000012187)	ENSBBBG00000012169	TARBP1 (ENSBBBG00000012166)	ENSBBBG00000012131	TOMM20 (ENSBBBG00000002279)	RBM34 (ENSBBBG00000012111)	ARID4B (ENSBBBG00000012082)	GGPS1 (ENSBBBG00000012005)	TBCE (ENSBBBG00000011996) ##22	B3GALNT2 (ENSBBBG00000011942)	GNG4 (ENSBBBG00000002229)	LYST (ENSBBBG00000001964)	NID1 (ENSBBBG00000011881)	GPR137B (ENSBBBG00000002201)	ERO1B (ENSBBBG00000002200)	EDARADD (ENSBBBG00000011823)	LGALS8 (ENSBBBG00000011788)	HEATR1 (ENSBBBG00000011661)	ACTN2 (ENSBBBG00000011537)	MTR (ENSBBBG00000011498)	RYR2 (ENSBBBG00000011403)	ZP4 (ENSBBBG00000011343)	CHRM3 (ENSBBBG00000007929)	ENSBBBG00000011317
Siberian musk deer	MODERN SPECIES	1227	ENSMMSG00000011379	SIPA1L2 (ENSMMSG00000011444)	MAP10 (ENSMMSG00000011578)	ENSMMSG00000011591	PCNX2 (ENSMMSG00000011626)	MAP3K21 (ENSMMSG00000011828)	ENSMMSG00000011880	SLC35F3 (ENSMMSG00000011897)	ENSMMSG00000011970	TARBP1 (ENSMMSG00000012045)	IRF2BP2 (ENSMMSG00000012640)	ENSMMSG00000012670	ENSMMSG00000012711	ARID4B (ENSMMSG00000012753)	ENSMMSG00000012823	TBCE (ENSMMSG00000012851) ##22	B3GALNT2 (ENSMMSG00000012986)	GNG4 (ENSMMSG00000013032)	LYST (ENSMMSG00000013087)	NID1 (ENSMMSG00000013215)	GPR137B (ENSMMSG00000013373)	ERO1B (ENSMMSG00000013428)	ENSMMSG00000013658	EDARADD (ENSMMSG00000013675)	ENSMMSG00000013711	LGALS8 (ENSMMSG00000013733)	ENSMMSG00000018975	HEATR1 (ENSMMSG00000019023)	ACTN2 (ENSMMSG00000019197)	MTR (ENSMMSG00000019301)	RYR2 (ENSMMSG00000019463)
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A.m	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A.m	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A.m	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A.m	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A.m	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162173
Beluga whale	MODERN SPECIES	46	TSNAX (ENSDLEG00000007566)	DISC1 (ENSDLEG00000007541)	SIPA1L2 (ENSDLEG00000007486)	NTPCR (ENSDLEG00000007439)	PCNX2 (ENSDLEG00000007346)	MAP3K21 (ENSDLEG00000007318)	KCNK1 (ENSDLEG00000007310)	SLC35F3 (ENSDLEG00000020064)	ENSDLEG00000020056	TARBP1 (ENSDLEG00000019914)	IRF2BP2 (ENSDLEG00000019890)	ENSDLEG00000019884	ENSDLEG00000019859	ARID4B (ENSDLEG00000019846)	GGPS1 (ENSDLEG00000019839)	TBCE (ENSDLEG00000019780) ##22	B3GALNT2 (ENSDLEG00000019750)	GNG4 (ENSDLEG00000019745)	LYST (ENSDLEG00000019492)	NID1 (ENSDLEG00000019448)	GPR137B (ENSDLEG00000019442)	ERO1B (ENSDLEG00000019217)	ENSDLEG00000019181	LGALS8 (ENSDLEG00000019169)	ENSDLEG00000019158	ENSDLEG00000019148	ACTN2 (ENSDLEG00000018818)	MTR (ENSDLEG00000018221)	ENSDLEG00000018155	RYR2 (ENSDLEG00000007203)	ZP4 (ENSDLEG00000006508)
Narwhal	MODERN SPECIES	311	SIPA1L2 (ENSMMNG00015015679)	NTPCR (ENSMMNG00015015728)	PCNX2 (ENSMMNG00015015765)	ENSMMNG00015015805	ENSMMNG00015015821	MAP3K21 (ENSMMNG00015015882)	KCNK1 (ENSMMNG00015015956)	SLC35F3 (ENSMMNG00015015995)	ENSMMNG00015016088	TARBP1 (ENSMMNG00015016138)	IRF2BP2 (ENSMMNG00015016256)	TOMM20 (ENSMMNG00015016291)	ENSMMNG00015016320	ARID4B (ENSMMNG00015016391)	ENSMMNG00015016507	TBCE (ENSMMNG00015016561) ##22	B3GALNT2 (ENSMMNG00015016675)	GNG4 (ENSMMNG00015016725)	LYST (ENSMMNG00015016793)	NID1 (ENSMMNG00015017041)	GPR137B (ENSMMNG00015017098)	ERO1B (ENSMMNG00015017169)	EDARADD (ENSMMNG00015017241)	LGALS8 (ENSMMNG00015017351)	HEATR1 (ENSMMNG00015017660)	ACTN2 (ENSMMNG00015018050)	MTR (ENSMMNG00015018116)	ENSMMNG00015018238	RYR2 (ENSMMNG00015018312)	ZP4 (ENSMMNG00015018602)	ENSMMNG00015018650
Vaquita	MODERN SPECIES	7	ENSPSNG00000013969	ENSPSNG00000014077	SIPA1L2 (ENSPSNG00000014318)	NTPCR (ENSPSNG00000014874)	PCNX2 (ENSPSNG00000014975)	MAP3K21 (ENSPSNG00000015079)	KCNK1 (ENSPSNG00000015220)	SLC35F3 (ENSPSNG00000015298)	ENSPSNG00000015509	TARBP1 (ENSPSNG00000015576)	IRF2BP2 (ENSPSNG00000015933)	TOMM20 (ENSPSNG00000016035)	ENSPSNG00000016090	ARID4B (ENSPSNG00000016188)	ENSPSNG00000016428	TBCE (ENSPSNG00000016546) ##22	B3GALNT2 (ENSPSNG00000016831)	ENSPSNG00000016937	NID1 (ENSPSNG00000016998)	GPR137B (ENSPSNG00000017071)	ERO1B (ENSPSNG00000017108)	EDARADD (ENSPSNG00000017210)	LGALS8 (ENSPSNG00000017330)	HEATR1 (ENSPSNG00000017452)	ACTN2 (ENSPSNG00000017620)	MTR (ENSPSNG00000018069)	ENSPSNG00000018643	RYR2 (ENSPSNG00000018774)	ENSPSNG00000019599	ZP4 (ENSPSNG00000019640)	CHRM3 (ENSPSNG00000019748)
Dolphin	MODERN SPECIES	3598																TBCE (ENSTTRG00000007763) ##22	B3GALNT2 (ENSTTRG00000007789)	GNG4 (ENSTTRG00000007805)	LYST (ENSTTRG00000007809)
Sperm whale	MODERN SPECIES	12	ENSPCTG00005011808	ENSPCTG00005011886	SIPA1L2 (ENSPCTG00005011979)	MAP10 (ENSPCTG00005012130)	NTPCR (ENSPCTG00005012147)	ENSPCTG00005012202	MAP3K21 (ENSPCTG00005012285)	KCNK1 (ENSPCTG00005012485)	SLC35F3 (ENSPCTG00005012532)	ENSPCTG00005012708	TARBP1 (ENSPCTG00005012747)	TOMM20 (ENSPCTG00005013086)	RBM34 (ENSPCTG00005013128)	ARID4B (ENSPCTG00005013219)	GGPS1 (ENSPCTG00005013323)	TBCE (ENSPCTG00005013402) ##22	B3GALNT2 (ENSPCTG00005013772)	GNG4 (ENSPCTG00005013875)	LYST (ENSPCTG00005013962)	NID1 (ENSPCTG00005014345)	GPR137B (ENSPCTG00005014448)	ERO1B (ENSPCTG00005014569)	EDARADD (ENSPCTG00005014699)	LGALS8 (ENSPCTG00005014968)	HEATR1 (ENSPCTG00005015550)	ACTN2 (ENSPCTG00005016643)	MTR (ENSPCTG00005017157)	RYR2 (ENSPCTG00005017273)	ZP4 (ENSPCTG00005018314)	ENSPCTG00005018464	CHRM3 (ENSPCTG00005018566)
Blue whale	DUPLICATION
Blue whale	MODERN SPECIES	19	ENSBMSG00010021427	ENSBMSG00010021419	ENSBMSG00010021411	ENSBMSG00010021397	ENSBMSG00010021324	OR51C1P (ENSBMSG00010021297)	OR51E2 (ENSBMSG00010021292)	OR51E1 (ENSBMSG00010021284)	TRIM68 (ENSBMSG00010021274)	ENSBMSG00010021266	ENSBMSG00010021184	TRIM21 (ENSBMSG00010021158)	ENSBMSG00010020942	ENSBMSG00010020895	RRM1 (ENSBMSG00010020801)	ENSBMSG00010020768 ##22	STIM1 (ENSBMSG00010020636)	RHOG (ENSBMSG00010020584)	ENSBMSG00010020576	PGAP2 (ENSBMSG00010020521)	NUP98 (ENSBMSG00010020322)	CHRNA10 (ENSBMSG00010020235)	ART1 (ENSBMSG00010020205)	ART5 (ENSBMSG00010020191)	ENSBMSG00010020160	ENSBMSG00010020144	ENSBMSG00010020130	ENSBMSG00010020113	RNF121 (ENSBMSG00010019983)	IL18BP (ENSBMSG00010019943)	NUMA1 (ENSBMSG00010019817)
Blue whale	MODERN SPECIES	7	ENSBMSG00010019578	SIPA1L2 (ENSBMSG00010019471)	MAP10 (ENSBMSG00010019435)	NTPCR (ENSBMSG00010019413)	PCNX2 (ENSBMSG00010019361)	MAP3K21 (ENSBMSG00010019318)	KCNK1 (ENSBMSG00010019306)	SLC35F3 (ENSBMSG00010019267)	ENSBMSG00010019239	TARBP1 (ENSBMSG00010019100)	IRF2BP2 (ENSBMSG00010019063)	ENSBMSG00010019032	ENSBMSG00010019006	ARID4B (ENSBMSG00010018959)	ENSBMSG00010018914	ENSBMSG00010018838 ##22	B3GALNT2 (ENSBMSG00010018760)	GNG4 (ENSBMSG00010018737)	LYST (ENSBMSG00010018690)	NID1 (ENSBMSG00010018629)	GPR137B (ENSBMSG00010018583)	ERO1B (ENSBMSG00010018563)	ENSBMSG00010018552	ENSBMSG00010018541	EDARADD (ENSBMSG00010018437)	LGALS8 (ENSBMSG00010018343)	HEATR1 (ENSBMSG00010018259)	ACTN2 (ENSBMSG00010018056)	MTR (ENSBMSG00010017739)	RYR2 (ENSBMSG00010015982)	ZP4 (ENSBMSG00010015504)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Caniformia	ANCESTRAL SPECIES	13	ENSGT00960000190028	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00960000190028	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011698.c.a.d	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000162764.B
Ursus	ANCESTRAL SPECIES	6	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00390000011698.c.a.d	ENSGT00940000164119	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318
Polar bear	MODERN SPECIES	160	TSNAX (ENSUMAG00000005995)	DISC1 (ENSUMAG00000006058)	ENSUMAG00000006471	SIPA1L2 (ENSUMAG00000006513)	MAP10 (ENSUMAG00000006674)	NTPCR (ENSUMAG00000006678)	PCNX2 (ENSUMAG00000006685)	MAP3K21 (ENSUMAG00000006698)	KCNK1 (ENSUMAG00000006703)	ENSUMAG00000006712	TARBP1 (ENSUMAG00000006730)	ENSUMAG00000006859	ENSUMAG00000006867	ARID4B (ENSUMAG00000006905)	GGPS1 (ENSUMAG00000007160)	TBCE (ENSUMAG00000007171) ##22	B3GALNT2 (ENSUMAG00000007179)	GNG4 (ENSUMAG00000007188)	LYST (ENSUMAG00000007493)	NID1 (ENSUMAG00000009613)	ENSUMAG00000009638	ZWINT (ENSUMAG00000009645)	PCDH15 (ENSUMAG00000009851)	DKK1 (ENSUMAG00000010974)	PRKG1 (ENSUMAG00000011015)	CSTF2T (ENSUMAG00000011141)	ENSUMAG00000011145	A1CF (ENSUMAG00000011162)	ENSUMAG00000011188	SGMS1 (ENSUMAG00000011285)	ENSUMAG00000011294
American black bear	MODERN SPECIES	2216															GGPS1 (ENSUAMG00000009652)	TBCE (ENSUAMG00000009654) ##22	ENSUAMG00000009655
Giant Panda	MODERN SPECIES	16	DISC1 (ENSAMEG00000002649)	SIPA1L2 (ENSAMEG00000002663)	MAP10 (ENSAMEG00000019801)	NTPCR (ENSAMEG00000002747)	PCNX2 (ENSAMEG00000002749)	MAP3K21 (ENSAMEG00000002788)	KCNK1 (ENSAMEG00000007248)	SLC35F3 (ENSAMEG00000003391)	ENSAMEG00000028553	TARBP1 (ENSAMEG00000003359)	IRF2BP2 (ENSAMEG00000008840)	TOMM20 (ENSAMEG00000029642)	ENSAMEG00000008831	ARID4B (ENSAMEG00000008801)	GGPS1 (ENSAMEG00000001137)	TBCE (ENSAMEG00000016186) ##22	B3GALNT2 (ENSAMEG00000016166)	GNG4 (ENSAMEG00000024829)	LYST (ENSAMEG00000003100)	NID1 (ENSAMEG00000003184)	ENSAMEG00000023782	EDARADD (ENSAMEG00000004777)	LGALS8 (ENSAMEG00000000976)	HEATR1 (ENSAMEG00000001015)	ACTN2 (ENSAMEG00000001117)	MTR (ENSAMEG00000001206)	RYR2 (ENSAMEG00000002582)	ENSAMEG00000002943	ENSAMEG00000020104	ENSAMEG00000006579	ENSAMEG00000024839
Mustelinae	ANCESTRAL SPECIES	123	ENSGT00960000190028	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a
American mink	MODERN SPECIES	308							SLC35F3 (ENSNVIG00000007554)	ENSNVIG00000007537	TARBP1 (ENSNVIG00000007492)	IRF2BP2 (ENSNVIG00000007464)	TOM20 (ENSNVIG00000007428)	RBM34 (ENSNVIG00000007398)	ARID4B (ENSNVIG00000007256)	GGPS1 (ENSNVIG00000007231)	ENSNVIG00000007226	TBCE (ENSNVIG00000007098) ##22	B3GALNT2 (ENSNVIG00000007076)	GNG4 (ENSNVIG00000007063)	LYST (ENSNVIG00000006945)	NID1 (ENSNVIG00000006876)	GPR137B (ENSNVIG00000006852)	ENSNVIG00000006838
Ferret	MODERN SPECIES	417								KCNK1 (ENSMPUG00000002793)	SLC35F3 (ENSMPUG00000002798)	TARBP1 (ENSMPUG00000002802)	IRF2BP2 (ENSMPUG00000002819)	ENSMPUG00000002823	RBM34 (ENSMPUG00000002849)	ARID4B (ENSMPUG00000002906)	GGPS1 (ENSMPUG00000002920)	TBCE (ENSMPUG00000002924) ##22	B3GALNT2 (ENSMPUG00000002933)	LYST (ENSMPUG00000002982)	NID1 (ENSMPUG00000003001)
Canidae	ANCESTRAL SPECIES	7	ENSGT00960000190028	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A.s	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00910000146855
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A.s	ENSGT00940000154442.z.a	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00950000183029.A.v
Dog	MODERN SPECIES	32	SIPA1L2 (ENSCAFG00845000316)	MAP10 (ENSCAFG00845000217)	ENSCAFG00845004013	PCNX2 (ENSCAFG00845003909)	MAP3K21 (ENSCAFG00845003868)	ENSCAFG00845003844	SLC35F3 (ENSCAFG00845003804)	ENSCAFG00845003725	TARBP1 (ENSCAFG00845003609)	IRF2BP2 (ENSCAFG00845003554)	TOMM20 (ENSCAFG00845003534)	RBM34 (ENSCAFG00845003503)	ARID4B (ENSCAFG00845003468)	GGPS1 (ENSCAFG00845003438)	ENSCAFG00845003416	TBCE (ENSCAFG00845003365) ##22	B3GALNT2 (ENSCAFG00845003224)	ENSCAFG00845003209	GNG4 (ENSCAFG00845003188)	LYST (ENSCAFG00845003136)	NID1 (ENSCAFG00845003062)	GPR137B (ENSCAFG00845003012)	ERO1B (ENSCAFG00845002967)	EDARADD (ENSCAFG00845002915)	LGALS8 (ENSCAFG00845002813)	HEATR1 (ENSCAFG00845002644)	ACTN2 (ENSCAFG00845002571)	MTR (ENSCAFG00845002493)	ENSCAFG00845002457	RYR2 (ENSCAFG00845002388)	ENSCAFG00845002311
Dingo	MODERN SPECIES	258	SIPA1L2 (ENSCAFG00020027174)	MAP10 (ENSCAFG00020027169)	NTPCR (ENSCAFG00020027167)	PCNX2 (ENSCAFG00020027161)	MAP3K21 (ENSCAFG00020027160)	KCNK1 (ENSCAFG00020027157)	SLC35F3 (ENSCAFG00020027152)	ENSCAFG00020027151	TARBP1 (ENSCAFG00020027141)	IRF2BP2 (ENSCAFG00020027135)	TOMM20 (ENSCAFG00020027132)	ENSCAFG00020027131	ARID4B (ENSCAFG00020027130)	ENSCAFG00020027126	ENSCAFG00020027125	TBCE (ENSCAFG00020027123) ##22	B3GALNT2 (ENSCAFG00020027121)	GNG4 (ENSCAFG00020027119)	LYST (ENSCAFG00020027099)	NID1 (ENSCAFG00020027007)	GPR137B (ENSCAFG00020026977)	ERO1B (ENSCAFG00020026965)	EDARADD (ENSCAFG00020026963)	LGALS8 (ENSCAFG00020026961)	HEATR1 (ENSCAFG00020026884)	ACTN2 (ENSCAFG00020025472)	MTR (ENSCAFG00020025329)	ENSCAFG00020025327	RYR2 (ENSCAFG00020025276)	ZP4 (ENSCAFG00020025258)	ENSCAFG00020025255
Red fox	MODERN SPECIES	72	ENSVVUG00000007151	SIPA1L2 (ENSVVUG00000007190)	MAP10 (ENSVVUG00000007291)	NTPCR (ENSVVUG00000007305)	PCNX2 (ENSVVUG00000007314)	MAP3K21 (ENSVVUG00000007319)	KCNK1 (ENSVVUG00000007351)	SLC35F3 (ENSVVUG00000007416)	ENSVVUG00000007440	TARBP1 (ENSVVUG00000007460)	ENSVVUG00000007867	TOMM20 (ENSVVUG00000007881)	ENSVVUG00000007919	ARID4B (ENSVVUG00000008154)	GGPS1 (ENSVVUG00000009121)	TBCE (ENSVVUG00000009133) ##22	B3GALNT2 (ENSVVUG00000009143)	GNG4 (ENSVVUG00000009169)	LYST (ENSVVUG00000009178)	NID1 (ENSVVUG00000009201)	ENSVVUG00000009215	ENSVVUG00000009218	GPR137B (ENSVVUG00000009252)	ERO1B (ENSVVUG00000009260)	EDARADD (ENSVVUG00000009287)	LGALS8 (ENSVVUG00000009310)	HEATR1 (ENSVVUG00000009369)	ACTN2 (ENSVVUG00000009416)	MTR (ENSVVUG00000009452)	RYR2 (ENSVVUG00000010417)	ENSVVUG00000013450
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683.i	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00990000210647	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324
Panthera	ANCESTRAL SPECIES	8	ENSGT00390000008459	ENSGT00390000018683.i	ENSGT00940000157374	ENSGT00940000159629	ENSGT01100000264371	ENSGT00940000155293.a.a	ENSGT00500000045038.n.b.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00990000210647	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324
Tiger	MODERN SPECIES	239	NTPCR (ENSPTIG00000021503)	ENSPTIG00000002957	ENSPTIG00000005528	ENSPTIG00000006850	ENSPTIG00000007282	KCNK1 (ENSPTIG00000007674)	ENSPTIG00000002970	SLC35F3 (ENSPTIG00000008023)	ENSPTIG00000008441	TARBP1 (ENSPTIG00000009281)	TOMM20 (ENSPTIG00000011155)	RBM34 (ENSPTIG00000011612)	ARID4B (ENSPTIG00000012520)	ENSPTIG00000015273	GGPS1 (ENSPTIG00000015630)	TBCE (ENSPTIG00000016342) ##22	B3GALNT2 (ENSPTIG00000016537)	GNG4 (ENSPTIG00000017122)	LYST (ENSPTIG00000019044)	NID1 (ENSPTIG00000005400)	GPR137B (ENSPTIG00000009159)	ERO1B (ENSPTIG00000009660)	EDARADD (ENSPTIG00000012291)	LGALS8 (ENSPTIG00000013624)	HEATR1 (ENSPTIG00000017413)	ACTN2 (ENSPTIG00000020701)	MTR (ENSPTIG00000001010)	RYR2 (ENSPTIG00000008292)	ZP4 (ENSPTIG00000017827)
Panthera_a	ANCESTRAL SPECIES	50	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683.i	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00500000045038.n.b.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00990000210647	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000166627	ENSGT00940000154906.C.d	ENSGT00940000161324
leopard	MODERN SPECIES	76	ENSPPRG00000013255	SIPA1L2 (ENSPPRG00000013364)	NTPCR (ENSPPRG00000013384)	PCNX2 (ENSPPRG00000013432)	MAP3K21 (ENSPPRG00000013459)	KCNK1 (ENSPPRG00000013470)	ENSPPRG00000019973	SLC35F3 (ENSPPRG00000013494)	ENSPPRG00000013529	TARBP1 (ENSPPRG00000013561)	IRF2BP2 (ENSPPRG00000013580)	TOMM20 (ENSPPRG00000013589)	RBM34 (ENSPPRG00000013597)	ARID4B (ENSPPRG00000013739)	GGPS1 (ENSPPRG00000013774)	TBCE (ENSPPRG00000013794) ##22	B3GALNT2 (ENSPPRG00000013803)	GNG4 (ENSPPRG00000013823)	LYST (ENSPPRG00000013880)	NID1 (ENSPPRG00000013954)	GPR137B (ENSPPRG00000013977)	ERO1B (ENSPPRG00000014002)	EDARADD (ENSPPRG00000014027)	LGALS8 (ENSPPRG00000014121)	HEATR1 (ENSPPRG00000014254)	ACTN2 (ENSPPRG00000014447)	MTR (ENSPPRG00000014567)	ENSPPRG00000014634	ZP4 (ENSPPRG00000015124)	CHRM3 (ENSPPRG00000019991)	ZNF37A (ENSPPRG00000015149)
lion	MODERN SPECIES	11	SIPA1L2 (ENSPLOG00000018356)	MAP10 (ENSPLOG00000018316)	ENSPLOG00000018291	PCNX2 (ENSPLOG00000017829)	MAP3K21 (ENSPLOG00000017645)	KCNK1 (ENSPLOG00000017615)	ENSPLOG00000017603	ENSPLOG00000017573	SLC35F3 (ENSPLOG00000017444)	ENSPLOG00000017410	TARBP1 (ENSPLOG00000017186)	TOMM20 (ENSPLOG00000017129)	RBM34 (ENSPLOG00000016898)	ARID4B (ENSPLOG00000016521)	ENSPLOG00000016460	TBCE (ENSPLOG00000016150) ##22	B3GALNT2 (ENSPLOG00000016028)	GNG4 (ENSPLOG00000016006)	ENSPLOG00000015975	ENSPLOG00000015892	NID1 (ENSPLOG00000015603)	GPR137B (ENSPLOG00000015508)	ERO1B (ENSPLOG00000015401)	EDARADD (ENSPLOG00000015279)	LGALS8 (ENSPLOG00000015207)	HEATR1 (ENSPLOG00000015107)	ACTN2 (ENSPLOG00000014697)	MTR (ENSPLOG00000014090)	ENSPLOG00000014003	RYR2 (ENSPLOG00000013195)	ZP4 (ENSPLOG00000013047)
Cat	MODERN SPECIES	242	SIPA1L2 (ENSFCAG00000007249)	MAP10 (ENSFCAG00000043757)	NTPCR (ENSFCAG00000014211)	PCNX2 (ENSFCAG00000004254)	MAP3K21 (ENSFCAG00000009652)	ENSFCAG00000006563	ENSFCAG00000027385	SLC35F3 (ENSFCAG00000001656)	ENSFCAG00000033897	TARBP1 (ENSFCAG00000014183)	IRF2BP2 (ENSFCAG00000040408)	TOMM20 (ENSFCAG00000028201)	RBM34 (ENSFCAG00000001852)	ARID4B (ENSFCAG00000030096)	GGPS1 (ENSFCAG00000008442)	TBCE (ENSFCAG00000011868) ##22	B3GALNT2 (ENSFCAG00000011870)	ENSFCAG00000046817	ENSFCAG00000034929	LYST (ENSFCAG00000006051)	NID1 (ENSFCAG00000011029)	GPR137B (ENSFCAG00000003382)	ERO1B (ENSFCAG00000003384)	EDARADD (ENSFCAG00000038673)	LGALS8 (ENSFCAG00000035073)	HEATR1 (ENSFCAG00000053194)	ACTN2 (ENSFCAG00000004445)	MTR (ENSFCAG00000004450)	RYR2 (ENSFCAG00000010961)	ZP4 (ENSFCAG00000010962)	CHRM3 (ENSFCAG00000032034)
Laurasiatheria_c	ANCESTRAL SPECIES	25	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Equus	ANCESTRAL SPECIES	58	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000153096.b.c.b.a.b.e	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084
Donkey	MODERN SPECIES	11	DISC1 (ENSEASG00005012822)	SIPA1L2 (ENSEASG00005012815)	MAP10 (ENSEASG00005012809)	NTPCR (ENSEASG00005012806)	PCNX2 (ENSEASG00005012793)	MAP3K21 (ENSEASG00005012775)	KCNK1 (ENSEASG00005012774)	SLC35F3 (ENSEASG00005038714)	ENSEASG00005036792	TARBP1 (ENSEASG00005000252)	ENSEASG00005025074	TOMM20 (ENSEASG00005035533)	RBM34 (ENSEASG00005000624)	ARID4B (ENSEASG00005000677)	GGPS1 (ENSEASG00005024771)	TBCE (ENSEASG00005001261) ##22	B3GALNT2 (ENSEASG00005001274)	GNG4 (ENSEASG00005031442)	ENSEASG00005004854	LYST (ENSEASG00005001718)	NID1 (ENSEASG00005003319)	GPR137B (ENSEASG00005003328)	ERO1B (ENSEASG00005003339)	EDARADD (ENSEASG00005035726)	LGALS8 (ENSEASG00005003376)	HEATR1 (ENSEASG00005003385)	ACTN2 (ENSEASG00005003395)	MTR (ENSEASG00005003419)	RYR2 (ENSEASG00005004008)	ENSEASG00005006867	ENSEASG00005038575
Horse	MODERN SPECIES		SIPA1L2 (ENSECAG00000008162)	MAP10 (ENSECAG00000007746)	NTPCR (ENSECAG00000023376)	PCNX2 (ENSECAG00000009930)	MAP3K21 (ENSECAG00000009443)	KCNK1 (ENSECAG00000009313)	SLC35F3 (ENSECAG00000007284)	TARBP1 (ENSECAG00000023673)	ENSECAG00000050783	IRF2BP2 (ENSECAG00000023459)	TOMM20 (ENSECAG00000019640)	RBM34 (ENSECAG00000013333)	ENSECAG00000029944	ARID4B (ENSECAG00000017836)	GGPS1 (ENSECAG00000017806)	TBCE (ENSECAG00000018794) ##22	B3GALNT2 (ENSECAG00000013338)	ENSECAG00000003192	ENSECAG00000057381	LYST (ENSECAG00000006981)	NID1 (ENSECAG00000016615)	GPR137B (ENSECAG00000019821)	ERO1B (ENSECAG00000008935)	ENSECAG00000056914	EDARADD (ENSECAG00000007926)	LGALS8 (ENSECAG00000015230)	HEATR1 (ENSECAG00000021443)	ACTN2 (ENSECAG00000009009)	MTR (ENSECAG00000021661)	RYR2 (ENSECAG00000006795)	ZP4 (ENSECAG00000010697)
Chiroptera	ANCESTRAL SPECIES	30	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Megabat	MODERN SPECIES	2375												TOMM20 (ENSPVAG00000015157)	RBM34 (ENSPVAG00000015158)	ARID4B (ENSPVAG00000015159)	GGPS1 (ENSPVAG00000015162)	TBCE (ENSPVAG00000015164) ##22	B3GALNT2 (ENSPVAG00000015166)
Microchiroptera	ANCESTRAL SPECIES	32	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00390000001136	ENSGT00940000155727	ENSGT00390000015845	ENSGT00940000153968.a.b.a	ENSGT00420000029824	ENSGT00940000154906.C.d	ENSGT00940000161324	ENSGT00940000160084	ENSGT00940000161899
Microbat	MODERN SPECIES	1509						ENSMLUG00000011167	KCNK1 (ENSMLUG00000014944)	ENSMLUG00000003535	TARBP1 (ENSMLUG00000002414)	ENSMLUG00000014369	IREB2 (ENSMLUG00000006783)	TOMM20 (ENSMLUG00000016218)	RBM34 (ENSMLUG00000016224)	ARID4B (ENSMLUG00000016232)	ENSMLUG00000016813	TBCE (ENSMLUG00000017600) ##22	ENSMLUG00000017601	ENSMLUG00000028428	ENSMLUG00000013613
Greater horseshoe bat	MODERN SPECIES	19	ENSRFEG00010022102	ENSRFEG00010022098	SIPA1L2 (ENSRFEG00010022092)	MAP10 (ENSRFEG00010022089)	ENSRFEG00010022088	PCNX2 (ENSRFEG00010022085)	MAP3K21 (ENSRFEG00010022081)	KCNK1 (ENSRFEG00010022078)	SLC35F3 (ENSRFEG00010022074)	COA6 (ENSRFEG00010022071)	TARBP1 (ENSRFEG00010022066)	IRF2BP2 (ENSRFEG00010022062)	TOMM20 (ENSRFEG00010022058)	RBM34 (ENSRFEG00010022051)	GGPS1 (ENSRFEG00010021743)	TBCE (ENSRFEG00010021701) ##22	B3GALNT2 (ENSRFEG00010021655)	GNG4 (ENSRFEG00010021636)	ENSRFEG00010021627	LYST (ENSRFEG00010021539)	NID1 (ENSRFEG00010021463)	GPR137B (ENSRFEG00010021434)	ERO1B (ENSRFEG00010021375)	EDARADD (ENSRFEG00010021340)	LGALS8 (ENSRFEG00010021272)	HEATR1 (ENSRFEG00010021201)	ACTN2 (ENSRFEG00010021122)	MTR (ENSRFEG00010020870)	RYR2 (ENSRFEG00010020432)	ZP4 (ENSRFEG00010020315)	CHRM3 (ENSRFEG00010020303)
Actinopterygii	ANCESTRAL SPECIES	19	ENSGT00390000008808	ENSGT00940000156258	ENSGT01100000263524.G	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000163863	ENSGT00940000166218	ENSGT00940000160591.b	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124
Reedfish	MODERN SPECIES	6	memo1 (ENSECRG00000017867)	psen2 (ENSECRG00000017831)	dpy30 (ENSECRG00000017803)	spast (ENSECRG00000017739)	opn6a (ENSECRG00000017700)	VIT (ENSECRG00000017493)	strn (ENSECRG00000017351)	HEATR5B (ENSECRG00000017276)	gpatch11 (ENSECRG00000017220)	ENSECRG00000017187	irf2bp2b (ENSECRG00000017168)	tomm20b (ENSECRG00000017143)	RBM34 (ENSECRG00000017099)	ARID4B (ENSECRG00000017017)	ggps1 (ENSECRG00000016961)	tbce (ENSECRG00000016920) ##22	b3galnt2 (ENSECRG00000016891)	GNG4 (ENSECRG00000016869)	LYST (ENSECRG00000016700)	NID1 (ENSECRG00000016589)	gpr137ba (ENSECRG00000016556)	ero1b (ENSECRG00000016434)	egln1b (ENSECRG00000016369)	tsnax (ENSECRG00000016347)	ENSECRG00000016330	DISC1 (ENSECRG00000016303)	sipa1l2 (ENSECRG00000016262)	ENSECRG00000016192	ntpcr (ENSECRG00000016167)	PCNX2 (ENSECRG00000013632)	MAP3K21 (ENSECRG00000013457)
Neopterygii	ANCESTRAL SPECIES	3	ENSGT00390000008808	ENSGT00940000156258	ENSGT01100000263524.G	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000163863	ENSGT00940000166218	ENSGT00940000160591.b	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00940000155704	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00940000170208	ENSGT00530000069620	ENSGT00940000157952
Spotted gar	MODERN SPECIES	654	psen2 (ENSLOCG00000015948)	dpy30 (ENSLOCG00000015945)	spast (ENSLOCG00000015939)	opn6a (ENSLOCG00000015937)	VIT (ENSLOCG00000015932)	strn (ENSLOCG00000015925)	HEATR5B (ENSLOCG00000015922)	gpatch11 (ENSLOCG00000015919)	ENSLOCG00000015909	map1lc3c (ENSLOCG00000015907)	irf2bp2b (ENSLOCG00000015906)	tomm20b (ENSLOCG00000015904)	rbm34 (ENSLOCG00000015902)	ARID4B (ENSLOCG00000015899)	ggps1 (ENSLOCG00000015898)	tbce (ENSLOCG00000015896) ##22	b3galnt2 (ENSLOCG00000015892)	srfb (ENSLOCG00000015887)	ptk7a (ENSLOCG00000015880)	soul4 (ENSLOCG00000015879)	ENSLOCG00000015877	mrpl2 (ENSLOCG00000015874)	ENSLOCG00000015867	ENSLOCG00000015862	ENSLOCG00000015860	KLHDC3 (ENSLOCG00000015854)	ENSLOCG00000015852	ntpcr (ENSLOCG00000015850)	ENSLOCG00000015849	sipa1l2 (ENSLOCG00000015837)	disc1 (ENSLOCG00000015836)
Osteoglossocephalai	ANCESTRAL SPECIES	39	ENSGT01100000263524.G.f.b	ENSGT00940000159330	ENSGT00950000183095.a.b.a.b.b	ENSGT00390000006205.a	ENSGT00440000039029	ENSGT00940000160736	ENSGT00940000163863	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00940000160591.a.b	ENSGT00390000011698.c.a.a	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562	ENSGT01100000263497.A	ENSGT00940000156359	ENSGT00940000156318.b.a	ENSGT00940000153986.b.a	ENSGT00390000007753.a	ENSGT00530000064271	ENSGT00940000153568.A	ENSGT00390000006176	ENSGT00940000157388	ENSGT00390000008459	ENSGT00390000018683	ENSGT00530000069620	ENSGT00940000180095	ENSGT00940000157952
Osteoglossiformes	ANCESTRAL SPECIES	447											ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b.b	ENSGT00390000011249	ENSGT00940000158149	ENSGT00940000153498.A	ENSGT00530000063405.a ##22	ENSGT00940000156562.q	ENSGT01100000263497.A
P. kingsleyae	MODERN SPECIES	306											irf2bp2b (ENSPKIG00000009344)	TOMM20 (ENSPKIG00000009309)	rbm34 (ENSPKIG00000009284)	ARID4B (ENSPKIG00000009248)	ggps1 (ENSPKIG00000009234)	tbce (ENSPKIG00000009157) ##22	b3galnt2 (ENSPKIG00000009056)	GNG4 (ENSPKIG00000009012)	LYST (ENSPKIG00000008940)	NID1 (ENSPKIG00000008884)	GPR137B (ENSPKIG00000008855)	ero1b (ENSPKIG00000008791)	EGLN1 (ENSPKIG00000008734)	sipa1l2 (ENSPKIG00000008478)
Asian bonytongue	MODERN SPECIES	7	ENSSFOG00015000670	SRD5A2 (ENSSFOG00015000636)	memo1 (ENSSFOG00015000579)	dpy30 (ENSSFOG00015000542)	SPAST (ENSSFOG00015000444)	opn6a (ENSSFOG00015000403)	ENSSFOG00015024576	VIT (ENSSFOG00015000365)	strn (ENSSFOG00015009248)	map1lc3c (ENSSFOG00015032836)	irf2bp2b (ENSSFOG00015025490)	tomm20b (ENSSFOG00015000175)	rbm34 (ENSSFOG00015000148)	ARID4B (ENSSFOG00015000132)	ggps1 (ENSSFOG00015032076)	tbce (ENSSFOG00015023234) ##22	b3galnt2 (ENSSFOG00015023226)	GNG4 (ENSSFOG00015023221)	ENSSFOG00015032886	LYST (ENSSFOG00015023174)	NID1 (ENSSFOG00015023125)	GPR137B (ENSSFOG00015008492)	ero1b (ENSSFOG00015023107)	ENSSFOG00015032952	EGLN1 (ENSSFOG00015008300)	sipa1l2 (ENSSFOG00015023071)	rrp36 (ENSSFOG00015023058)	tmem264 (ENSSFOG00015033110)	ENSSFOG00015023017	mrpl45 (ENSSFOG00015023003)	ENSSFOG00015022983
Clupeocephala	ANCESTRAL SPECIES	112									ENSGT00390000008808.r.a	ENSGT00940000156258.f.b	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000157388.b.b	ENSGT00530000064271	ENSGT00390000003866.a.a.f	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000154922.a	ENSGT00940000165311.b	ENSGT00940000162755	ENSGT00500000045018	ENSGT00940000154987.i.b.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	41															ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000157388.b.b	ENSGT00530000064271	ENSGT00390000003866.a.a.f	ENSGT00940000165109	ENSGT00940000157908.h	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000154922.a
Acanthomorphata	ANCESTRAL SPECIES	115											ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00530000064271	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755	ENSGT00500000045018	ENSGT00940000154987.i.b.a.b	ENSGT00940000155129.B	ENSGT00940000155423	ENSGT00390000006712
Euacanthomorphacea	ANCESTRAL SPECIES	37	ENSGT00940000156530.c.`b.a	ENSGT00390000004284.f	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000014687	ENSGT00390000004881	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00940000153566.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b
Percomorphaceae	ANCESTRAL SPECIES	37	ENSGT00940000156530.c.`b.a	ENSGT00390000004284.f	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000014687	ENSGT00390000004881	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755	ENSGT00500000045018
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a
Ovalentaria	ANCESTRAL SPECIES		ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000013973.A.a.c.b.a	ENSGT00390000008711.h	ENSGT01100000263483.E.b.b	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a
Ovalentaria_B	ANCESTRAL SPECIES	57		ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000008711.h	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00390000003049.b.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.v	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148.g.a.b
Cichlidae	ANCESTRAL SPECIES	62			ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000008711.h	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT01100000263491.a.b.a.a.a.b.a	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	49			ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000008711.h	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT01100000263491.a.b.b.d	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b
Nile tilapia	MODERN SPECIES	18	tmx2b (ENSONIG00000010916)	ENSONIG00000028344	zdhhc5a (ENSONIG00000010920)	ENSONIG00000031025	ENSONIG00000027993	slc43a1b (ENSONIG00000010924)	ENSONIG00000027206	ENSONIG00000042009	ENSONIG00000038452	p2rx3b (ENSONIG00000018114)	ENSONIG00000043234	irf2bp2b (ENSONIG00000018120)	ENSONIG00000028940	tomm20b (ENSONIG00000029653)	rbm34 (ENSONIG00000036958)	tbce (ENSONIG00000018128) ##22	ENSONIG00000030644	NID1 (ENSONIG00000018134)	ENSONIG00000034964	GPR137B (ENSONIG00000018137)	ero1b (ENSONIG00000018139)	gstt1b (ENSONIG00000018145)	chchd10 (ENSONIG00000018149)	ENSONIG00000037572	ENSONIG00000027926	ENSONIG00000027828	ENSONIG00000038084	ENSONIG00000026178	ENSONIG00000038595	vps37c (ENSONIG00000039082)	tmem176 (ENSONIG00000018153)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	60					ENSGT00390000008711.h	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d	ENSGT00940000166931	ENSGT00940000161345	ENSGT01100000263491.a.b.a.a.a.b.a	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b
Haplochromini	ANCESTRAL SPECIES	70	ENSGT00940000168028	ENSGT00940000165127.a	ENSGT01040000240385.B.c.b	ENSGT00390000008711.h	ENSGT00940000178757	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b.a.a	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d.b	ENSGT00940000166931	ENSGT00940000161345	ENSGT01100000263491.a.b.a.a.a.b.a	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b
Burton s mouthbrooder	MODERN SPECIES	1082														tomm20b (ENSHBUG00000015495)	rbm34 (ENSHBUG00000015508)	tbce (ENSHBUG00000015523) ##22	NID1 (ENSHBUG00000015537)	tpk2 (ENSHBUG00000015588)	GMEB2 (ENSHBUG00000015596)	pdyn (ENSHBUG00000015602)
Haplochromini_A	ANCESTRAL SPECIES	79				ENSGT00390000008711.h	ENSGT00940000178757	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b.a.a	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d.b	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b	ENSGT00940000158105
P. nyererei	MODERN SPECIES	709														tomm20b (ENSPNYG00000004989)	rbm34 (ENSPNYG00000004970)	tbce (ENSPNYG00000005013) ##22	NID1 (ENSPNYG00000005036)	GPR137B (ENSPNYG00000005097)	ero1b (ENSPNYG00000005134)	ddt (ENSPNYG00000005145)	chchd10 (ENSPNYG00000005156)	ENSPNYG00000005202
Haplochromini_B	ANCESTRAL SPECIES	47	ENSGT00940000174164	ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000008711.h	ENSGT00940000178757	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b.a.a	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000163205.d.b	ENSGT00940000166931	ENSGT00940000161345	ENSGT00940000158942.a	ENSGT00950000183012.A.b	ENSGT00510000052942	ENSGT00510000052596.b	ENSGT01030000234627.a.b.a.a.b.a	ENSGT00940000155484.b	ENSGT00390000009223	ENSGT00940000165522.b	ENSGT00940000158105
Eastern happy	DUPLICATION
Eastern happy	MODERN SPECIES	141														ENSACLG00000026323	rbm34 (ENSACLG00000026337)	tbce (ENSACLG00000026359) ##22	NID1 (ENSACLG00000026381)
Eastern happy	MODERN SPECIES	18	ENSACLG00000017678	ENSACLG00000017800	ENSACLG00000017809	ENSACLG00000017914	ENSACLG00000017924	tmx2b (ENSACLG00000017930)	zdhhc5a (ENSACLG00000017981)	slc43a1b (ENSACLG00000018013)	ENSACLG00000018125	pold4 (ENSACLG00000018341)	p2rx3b (ENSACLG00000018368)	ENSACLG00000018432	irf2bp2b (ENSACLG00000018448)	tomm20b (ENSACLG00000018460)	rbm34 (ENSACLG00000018471)	tbce (ENSACLG00000018483) ##22	NID1 (ENSACLG00000018528)	GPR137B (ENSACLG00000018600)	ero1b (ENSACLG00000018651)	gstt1b (ENSACLG00000018766)	ddt (ENSACLG00000019041)	gstt1b (ENSACLG00000019064)	chchd10 (ENSACLG00000019377)	ENSACLG00000019396	ENSACLG00000019413	ENSACLG00000019424	ENSACLG00000019452	vps37c (ENSACLG00000019481)	ENSACLG00000019497	tmem176 (ENSACLG00000019510)	ENSACLG00000019535
Zebra mbuna	MODERN SPECIES	269													ENSMZEG00005021594	tomm20b (ENSMZEG00005021590)	rbm34 (ENSMZEG00005021586)	tbce (ENSMZEG00005021582) ##22	NID1 (ENSMZEG00005021580)	GPR137B (ENSMZEG00005021574)	ero1b (ENSMZEG00005021555)
Lyretail cichlid	MODERN SPECIES	530														tomm20b (ENSNBRG00000011138)	rbm34 (ENSNBRG00000010975)	tbce (ENSNBRG00000010949) ##22	NID1 (ENSNBRG00000010721)	ENSNBRG00000010584	ero1b (ENSNBRG00000010520)	gstt1b (ENSNBRG00000010482)	ddt (ENSNBRG00000010461)	chchd10 (ENSNBRG00000010445)	ENSNBRG00000010405	ENSNBRG00000010322	vps37c (ENSNBRG00000010313)	ENSNBRG00000010289	ENSNBRG00000010275	stx3a (ENSNBRG00000010247)	ENSNBRG00000010225	spcs3 (ENSNBRG00000010177)	ENSNBRG00000010167
Midas cichlid	MODERN SPECIES	1841										TMEM151B (ENSACIG00000014784)	bend3 (ENSACIG00000014792)	mtres1 (ENSACIG00000014801)	TMEM151B (ENSACIG00000014822)	tomm20b (ENSACIG00000014827)	rbm34 (ENSACIG00000014842)	tbce (ENSACIG00000014857) ##22	NID1 (ENSACIG00000014899)	GPR137B (ENSACIG00000014992)	ero1b (ENSACIG00000015017)	gstt1b (ENSACIG00000015059)	ddt (ENSACIG00000015354)	chchd10 (ENSACIG00000015410)	ENSACIG00000015429
Pomacentridae	ANCESTRAL SPECIES	254													ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22
Pomacentridae_A	DUPLICATION
Pomacentridae_A	ANCESTRAL SPECIES	284													ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a.q ##22
Amphiprion	ANCESTRAL SPECIES	309														ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a.q ##22	ENSGT00940000156318.b.b.d	ENSGT01010000223313
Clown anemonefish	MODERN SPECIES	3034																tbce (ENSAOCG00000019918) ##22	ENSAOCG00000019902	ENSAOCG00000001471
Orange clownfish	MODERN SPECIES	17	esf1 (ENSAPEG00000022385)	ndufaf5 (ENSAPEG00000022351)	gas8 (ENSAPEG00000022335)	KIF16B (ENSAPEG00000022252)	snrpb2 (ENSAPEG00000022231)	prokr1a (ENSAPEG00000022223)	APLF (ENSAPEG00000022214)	ENSAPEG00000022203	fbxo48 (ENSAPEG00000022199)	cnrip1a (ENSAPEG00000022193)	ENSAPEG00000022167	IRF2BP2 (ENSAPEG00000022150)	ENSAPEG00000022141	tomm20b (ENSAPEG00000022117)	rbm34 (ENSAPEG00000022105)	tbce (ENSAPEG00000022075) ##22	ENSAPEG00000022052	ENSAPEG00000022037	NID1 (ENSAPEG00000021990)	ENSAPEG00000021969	ENSAPEG00000021952	JAG1 (ENSAPEG00000021693)	ENSAPEG00000021655	ENSAPEG00000021650	zdhhc5a (ENSAPEG00000021635)	tmx2b (ENSAPEG00000021613)	ENSAPEG00000021590	kdm2aa (ENSAPEG00000021461)	stx3a (ENSAPEG00000021427)	ENSAPEG00000021406	ENSAPEG00000021396
Spiny chromis	MODERN SPECIES	3156																tbce (ENSAPOG00000006994) ##22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00530000063405.a.r ##22
Spiny chromis	MODERN SPECIES	3211															rbm34 (ENSAPOG00000004027)	ENSAPOG00000003891 ##22
Bicolor damselfish	MODERN SPECIES	2618														tomm20b (ENSSPAG00000010163)	rbm34 (ENSSPAG00000010174)	tbce (ENSSPAG00000010192) ##22
Atherinomorphae	ANCESTRAL SPECIES	38	ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000013973.A.a.c.b.a	ENSGT00390000008711.h	ENSGT01100000263483.E.b.b	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000264278	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a
Oryzias	ANCESTRAL SPECIES	15	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000264278	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000018868.B.b	ENSGT00390000006233.c.b.z
Oryzias_b	ANCESTRAL SPECIES	34	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000264278	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736.a	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00940000163878	ENSGT00390000018868.B.b
Indian medaka	MODERN SPECIES	21	ATL2 (ENSOMEG00000008420)	ENSOMEG00000008324	ENSOMEG00000008260	ENSOMEG00000008226	rcor3 (ENSOMEG00000000661)	kcnh1b (ENSOMEG00000008109)	ENSOMEG00000008067	ENSOMEG00000008062	H2BC7 (ENSOMEG00000008050)	ENSOMEG00000008040	ENSOMEG00000008032	ENSOMEG00000008013	IRF2BP2 (ENSOMEG00000007959)	tomm20b (ENSOMEG00000007937)	rbm34 (ENSOMEG00000007902)	tbce (ENSOMEG00000007846) ##22	NID1 (ENSOMEG00000007786)	ENSOMEG00000007765	ero1b (ENSOMEG00000007744)	ENSOMEG00000007674	ENSOMEG00000007670	ltv1 (ENSOMEG00000001034)	ENSOMEG00000007562	ENSOMEG00000007543	ENSOMEG00000007515	ENSOMEG00000007489	pus10 (ENSOMEG00000007432)	cct4 (ENSOMEG00000007401)	FAM161A (ENSOMEG00000007369)	ENSOMEG00000007356	XPO1 (ENSOMEG00000007343)
Javanese ricefish	MODERN SPECIES		ENSOJAG00000015082	ENSOJAG00000015060	ENSOJAG00000015045	ENSOJAG00000015018	kcnh1b (ENSOJAG00000014926)	ENSOJAG00000014893	ENSOJAG00000014861	ENSOJAG00000014850	ENSOJAG00000014835	ENSOJAG00000014813	ENSOJAG00000014797	ENSOJAG00000014768	IRF2BP2 (ENSOJAG00000014745)	tomm20b (ENSOJAG00000014723)	rbm34 (ENSOJAG00000014677)	tbce (ENSOJAG00000014100) ##22	GPR137B (ENSOJAG00000013781)	ero1b (ENSOJAG00000013693)	ENSOJAG00000013661	ENSOJAG00000013643	ENSOJAG00000013622	ENSOJAG00000013606	ENSOJAG00000013584	ENSOJAG00000013560	ltv1 (ENSOJAG00000013552)	ENSOJAG00000013544	ENSOJAG00000013513	ENSOJAG00000013460	ENSOJAG00000013381	ENSOJAG00000011570	pus10 (ENSOJAG00000011248)
Oryzias_a	ANCESTRAL SPECIES	31	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000264278	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00390000002789	ENSGT00940000177040	ENSGT00530000067736	ENSGT00770000121010	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000157824.i.a	ENSGT00940000153408.B.s.b	ENSGT00940000158659	ENSGT00390000018868.B.b	ENSGT00390000006233.c.b.z
Japanese Medaka HdrR	MODERN SPECIES		HNRNPLL (ENSORLG00000001005)	ENSORLG00000001049	ENSORLG00000001076	ENSORLG00000001087	ENSORLG00000001109	rcor3 (ENSORLG00000001117)	ENSORLG00000001160	ENSORLG00000022684	ENSORLG00000024338	hist1h2a11 (ENSORLG00000024975)	ENSORLG00000030596	ENSORLG00000029583	ENSORLG00000001201	tomm20b (ENSORLG00000029910)	rbm34 (ENSORLG00000001221)	tbce (ENSORLG00000001253) ##22	NID1 (ENSORLG00000001273)	ENSORLG00000001277	ENSORLG00000026620	ENSORLG00000001294	ero1b (ENSORLG00000001316)	ENSORLG00000024877	H4C7 (ENSORLG00000026225)	ENSORLG00000023073	ENSORLG00000027975	ENSORLG00000028520	ltv1 (ENSORLG00000001375)	ENSORLG00000029695	ifngr1 (ENSORLG00000001387)	ENSORLG00000001411	ENSORLG00000001445
Chinese medaka	MODERN SPECIES	744	JAG1 (ENSOSIG00000020506)	ENSOSIG00000020481	ENSOSIG00000020480	slc22a7a (ENSOSIG00000020477)	ATL2 (ENSOSIG00000020415)	HNRNPLL (ENSOSIG00000020394)	ENSOSIG00000020386	ENSOSIG00000017859	ENSOSIG00000017656	ENSOSIG00000017650	rcor3 (ENSOSIG00000017647)	kcnh1b (ENSOSIG00000017571)	IRF2BP2 (ENSOSIG00000017566)	tomm20b (ENSOSIG00000017562)	rbm34 (ENSOSIG00000017558)	tbce (ENSOSIG00000017552) ##22	NID1 (ENSOSIG00000017538)	GPR137B (ENSOSIG00000017526)	ero1b (ENSOSIG00000017048)	ENSOSIG00000017026	ENSOSIG00000016545	cct4 (ENSOSIG00000016484)	ENSOSIG00000016472	XPO1 (ENSOSIG00000015991)
Cyprinodontiformes	ANCESTRAL SPECIES	38	ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000013973.A.a.c.b.a	ENSGT00390000008711.h	ENSGT01100000263483.E.b.b	ENSGT00940000157807.g.b	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT01100000264278	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000154196.b	ENSGT00940000155793.a.a
Cyprinodontoidei	ANCESTRAL SPECIES	101															ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT00940000154922.a	ENSGT00940000176873	ENSGT00530000064271	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000154196.b
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000157297	ENSGT00940000162501	ENSGT00940000158660	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063.l	ENSGT00940000156063.k	ENSGT00940000154978	ENSGT00940000160339	ENSGT01100000263512.a.a.b.b	ENSGT00940000155201.c	ENSGT00940000158472	ENSGT00940000159559	ENSGT00940000159333.j	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00990000204057	ENSGT00530000063725.p.f.d.c	ENSGT00390000007753.a	ENSGT00940000154922.a	ENSGT00940000176873	ENSGT01100000263833	ENSGT00530000064271	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000154196.b	ENSGT00940000160591.a.a	ENSGT01020000230351.B.j.a	ENSGT00390000005096	ENSGT00940000165861
Poecilia	ANCESTRAL SPECIES	36	ENSGT00940000157297	ENSGT00940000162501	ENSGT00940000158660	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063.l	ENSGT00940000156063.k	ENSGT00940000154978	ENSGT00940000160339	ENSGT01100000263512.a.a.b.b	ENSGT00940000155201.c	ENSGT00940000158472	ENSGT00940000159559	ENSGT00940000159333.j	ENSGT00390000011249	ENSGT00530000063405.a ##22
NAME_6	ANCESTRAL SPECIES	170	ENSGT00940000157297	ENSGT00940000162501	ENSGT00940000158660	ENSGT00940000154391.a.a	ENSGT00390000009908	ENSGT00940000156063.l	ENSGT00940000156063.k	ENSGT00940000154978	ENSGT00940000160339	ENSGT01100000263512.a.a.b.b	ENSGT00940000155201.c	ENSGT00940000158472	ENSGT00940000159559	ENSGT00940000159333.j	ENSGT00390000011249	ENSGT00530000063405.a ##22
Sailfin molly	MODERN SPECIES	1361														nr3c2 (ENSPLAG00000018402)	ENSPLAG00000018385	tbce (ENSPLAG00000018372) ##22
Amazon molly	MODERN SPECIES	382	frem3 (ENSPFOG00000007960)	hhip (ENSPFOG00000008387)	smad1 (ENSPFOG00000024550)	mmaa (ENSPFOG00000008521)	ENSPFOG00000024596	ZNF827 (ENSPFOG00000008596)	lsm6 (ENSPFOG00000008881)	ENSPFOG00000008904	pou4f2 (ENSPFOG00000008912)	ednraa (ENSPFOG00000008928)	tmem184c (ENSPFOG00000009030)	prmt9 (ENSPFOG00000009121)	arhgap10 (ENSPFOG00000009231)	nr3c2 (ENSPFOG00000009620)	ENSPFOG00000009829	tbce (ENSPFOG00000009949) ##22	ENSPFOG00000022544	ENSPFOG00000010108	ENSPFOG00000010157
Guppy	MODERN SPECIES	439	USP38 (ENSPREG00000023251)	smarca5 (ENSPREG00000023250)	frem3 (ENSPREG00000023248)	hhip (ENSPREG00000023246)	smad1 (ENSPREG00000023244)	mmaa (ENSPREG00000023243)	ZNF827 (ENSPREG00000023239)	lsm6 (ENSPREG00000023235)	pou4f2 (ENSPREG00000023234)	ednraa (ENSPREG00000023232)	tmem184c (ENSPREG00000023231)	prmt9 (ENSPREG00000023230)	arhgap10 (ENSPREG00000023229)	nr3c2 (ENSPREG00000023228)	rbm34 (ENSPREG00000023227)	tbce (ENSPREG00000023225) ##22	ENSPREG00000023224	ENSPREG00000023215	ENSPREG00000023200	ENSPREG00000023172	ENSPREG00000023167	ENSPREG00000023119	ENSPREG00000023063	ENSPREG00000023034	ENSPREG00000023018	ENSPREG00000022917	ero1b (ENSPREG00000022820)	slc22a7a (ENSPREG00000022811)	ENSPREG00000022792	ENSPREG00000022790	rrp36 (ENSPREG00000022787)
Platyfish	MODERN SPECIES	19	smarca5 (ENSXMAG00000009678)	frem3 (ENSXMAG00000009662)	hhip (ENSXMAG00000009627)	smad1 (ENSXMAG00000009618)	mmaa (ENSXMAG00000009615)	ZNF827 (ENSXMAG00000009608)	lsm6 (ENSXMAG00000009606)	pou4f2 (ENSXMAG00000018789)	ENSXMAG00000028074	ednraa (ENSXMAG00000009592)	tmem184c (ENSXMAG00000009576)	prmt9 (ENSXMAG00000017138)	arhgap10 (ENSXMAG00000013826)	nr3c2 (ENSXMAG00000013809)	rbm34 (ENSXMAG00000029852)	tbce (ENSXMAG00000013806) ##22	ENSXMAG00000029982	ENSXMAG00000021553	ENSXMAG00000023672	ENSXMAG00000030075	ero1b (ENSXMAG00000002851)	slc22a7a (ENSXMAG00000013805)	rrp36 (ENSXMAG00000013804)	ENSXMAG00000026148	ENSXMAG00000024477	gtpbp2b (ENSXMAG00000013799)	tp53bp2b (ENSXMAG00000013797)	HNRNPLL (ENSXMAG00000013789)	rcor3 (ENSXMAG00000013784)	irf2bp2b (ENSXMAG00000026835)	p2rx3b (ENSXMAG00000013768)
NAME_4	ANCESTRAL SPECIES	565															ENSGT00390000011249	ENSGT00530000063405.a ##22
Mummichog	MODERN SPECIES	2458		ENSFHEG00000008704	ENSFHEG00000008734	ENSFHEG00000008712	d2hgdh (ENSFHEG00000008746)	acvr1l (ENSFHEG00000008759)	otomp (ENSFHEG00000008795)	hs6st1b (ENSFHEG00000008842)	uggt1 (ENSFHEG00000008962)	ENSFHEG00000008973	ola1 (ENSFHEG00000009030)	TRA2B (ENSFHEG00000009235)	ENSFHEG00000009260	ENSFHEG00000009269	pcnt (ENSFHEG00000009485)	tbce (ENSFHEG00000000220) ##22	atg9a (ENSFHEG00000009644)	ENSFHEG00000009764	ENSFHEG00000009781	sumo3b (ENSFHEG00000009799)	TSPEAR (ENSFHEG00000009810)	ENSFHEG00000009827	fabp7a (ENSFHEG00000009837)	ENSFHEG00000009852	ENSFHEG00000009869	fyna (ENSFHEG00000009938)	marcksb (ENSFHEG00000009956)	col10a1a (ENSFHEG00000009962)	fhl5 (ENSFHEG00000009976)	fut9a (ENSFHEG00000010159)
Sheepshead minnow	MODERN SPECIES	695						mapk1 (ENSCVAG00000018163)	ENSCVAG00000018188	ppil2 (ENSCVAG00000018198)	stambpb (ENSCVAG00000018236)	slc39a14 (ENSCVAG00000018278)	gys2 (ENSCVAG00000018346)	spx (ENSCVAG00000018364)	rcor3 (ENSCVAG00000018455)	p2rx3b (ENSCVAG00000018678)	rbm34 (ENSCVAG00000018699)	tbce (ENSCVAG00000018860) ##22
Aplocheiloidei	ANCESTRAL SPECIES	185				ENSGT00940000168028	ENSGT00940000165127.a	ENSGT00390000008711.h	ENSGT00390000003751.a	ENSGT00940000156001.c	ENSGT00940000153576.c.a.a.b	ENSGT00940000165861	ENSGT00390000005096	ENSGT01020000230351.B.j.a	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a
Mangrove rivulus	MODERN SPECIES	276								ENSKMAG00000007616	ENSKMAG00000007692	ENSKMAG00000007709	ENSKMAG00000007724	p2rx3b (ENSKMAG00000007737)	irf2bp2b (ENSKMAG00000007757)	tomm20b (ENSKMAG00000007770)	rbm34 (ENSKMAG00000007790)	tbce (ENSKMAG00000007819) ##22	ero1b (ENSKMAG00000007845)	ENSKMAG00000007885	ENSKMAG00000007902
Turquoise killifish	MODERN SPECIES	1617	atpv0e2 (ENSNFUG00015011330)	HYLS1 (ENSNFUG00015011348) #20	ccdc3b (ENSNFUG00015011363)	ZGMRPL4 (ENSNFUG00015011372)	ENSNFUG00015011456	mrpl21 (ENSNFUG00015011963)	C11H6ORF120 (ENSNFUG00015011970)	npepps (ENSNFUG00015012030)	MRPL45 (ENSNFUG00015012866)	ENSNFUG00015012876	socs7 (ENSNFUG00015012904)	ENSNFUG00015012916	sp2 (ENSNFUG00015012924)	tomm20b (ENSNFUG00015012928)	RBM34 (ENSNFUG00015012947)	tbce (ENSNFUG00015012964) ##22	glrba (ENSNFUG00015013001)	ENSNFUG00015013009	ENSNFUG00015013085	CCSAP (ENSNFUG00015013594)	NUP133 (ENSNFUG00015013662)	ATL2 (ENSNFUG00015014470)	ENSNFUG00015014935	HNRPLL (ENSNFUG00015014956)	slc22a7a (ENSNFUG00015015342)	ENSNFUG00015015427	ENSNFUG00015015432	rrp36 (ENSNFUG00015015436)	tp53bp2b (ENSNFUG00015015450)	ENSNFUG00015015490	ENSNFUG00015015503
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755
Tetraodontidae	ANCESTRAL SPECIES	244													ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	src (ENSTNIG00000019527)	ENSTNIG00000019439	ENSTNIG00000019497	ENSTNIG00000019538	akirin1 (ENSTNIG00000019785)	ENSTNIG00000000658	lnx2b (ENSTNIG00000019789)	stat3 (ENSTNIG00000019687)	ENSTNIG00000019475	ENSTNIG00000019555	psmb7 (ENSTNIG00000019654)	reep5 (ENSTNIG00000019441)	ENSTNIG00000019711	ndufv1 (ENSTNIG00000019833)	ENSTNIG00000019665	ENSTNIG00000019816 ##22	ENSTNIG00000019700	ENSTNIG00000000861	ENSTNIG00000019592	ENSTNIG00000019490	ENSTNIG00000000995	ENSTNIG00000019474	ENSTNIG00000019481	ENSTNIG00000019734	serinc1 (ENSTNIG00000019609)	ENSTNIG00000000680	ENSTNIG00000019688	rgs16 (ENSTNIG00000019476)	ENSTNIG00000000225	bhmt (ENSTNIG00000019455)	ENSTNIG00000019554
Tetraodon	MODERN SPECIES	26	mtif2 (ENSTNIG00000006453)	EML6 (ENSTNIG00000006454)	SPTBN1 (ENSTNIG00000006455)	polr3f (ENSTNIG00000006456)	ENSTNIG00000006457	TMEM63B (ENSTNIG00000003645)	srd5a2a (ENSTNIG00000000347)	ENSTNIG00000001861	psen2 (ENSTNIG00000002925)	eif4a3 (ENSTNIG00000002924)	SRF (ENSTNIG00000002923)	soul4 (ENSTNIG00000002922)	tmem178a (ENSTNIG00000002921)	irf2bp2b (ENSTNIG00000002920)	ENSTNIG00000001302	ENSTNIG00000002919 ##22	mrps12 (ENSTNIG00000004898)	selenot2 (ENSTNIG00000004897)	COX18 (ENSTNIG00000004896)	igfbp7 (ENSTNIG00000004895)	polr2b (ENSTNIG00000004894)	sqstm1 (ENSTNIG00000003036)	TBC1D9B (ENSTNIG00000003035)	rnf130 (ENSTNIG00000001940)	neurog1 (ENSTNIG00000006360)	exosc3 (ENSTNIG00000006359)	b4galt1l (ENSTNIG00000006358)	rest (ENSTNIG00000006357)	noa1 (ENSTNIG00000006356)	nipsnap3a (ENSTNIG00000006355)	ABCA1 (ENSTNIG00000006354)
Fugu	MODERN SPECIES	8	SPTBN1 (ENSTRUG00000012113)	ENSTRUG00000012074	kat14 (ENSTRUG00000012026)	TMEM63B (ENSTRUG00000022708)	ENSTRUG00000033243	dpy30 (ENSTRUG00000011982)	psen2 (ENSTRUG00000024631)	eif4a3 (ENSTRUG00000011543)	SRF (ENSTRUG00000011448)	soul4 (ENSTRUG00000020755)	tmem178a (ENSTRUG00000011391)	ENSTRUG00000030212	irf2bp2b (ENSTRUG00000022397)	tomm20a (ENSTRUG00000011255)	rbm34 (ENSTRUG00000011172)	tbce (ENSTRUG00000011146) ##22	ENSTRUG00000033272	ENSTRUG00000027181	ENSTRUG00000032835	ero1b (ENSTRUG00000011019)	ENSTRUG00000010886	ENSTRUG00000030871	ENSTRUG00000028140	gtpbp2b (ENSTRUG00000010665)	tp53bp2b (ENSTRUG00000010361)	rrp36 (ENSTRUG00000021893)	ENSTRUG00000023709	map1lc3c (ENSTRUG00000010294)	strn (ENSTRUG00000009886)	btbd3a (ENSTRUG00000009813)	ndufaf5 (ENSTRUG00000009337)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b	ENSGT00940000162755
Ballan wrasse	MODERN SPECIES	689																tbce (ENSLBEG00000017098) ##22	NID1 (ENSLBEG00000016844)	ENSLBEG00000016760	ero1b (ENSLBEG00000016698)	ENSLBEG00000016653	ENSLBEG00000016635	ENSLBEG00000016570	ENSLBEG00000016533	ENSLBEG00000016467	ENSLBEG00000016439	ENSLBEG00000016421
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000160954	ENSGT00940000154196.b	ENSGT00940000155793.a.a	ENSGT00550000074953	ENSGT00940000165311.b
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00940000176873	ENSGT01100000263621	ENSGT00940000160148	ENSGT00530000064271	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00940000162888.A.a.a.b.r.a	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b
European seabass	DUPLICATION
European seabass	DUPLICATION
European seabass	MODERN SPECIES	19	ENSDLAG00005034437	ENSDLAG00005033243	ENSDLAG00005027525	ENSDLAG00005018273	map1lc3c (ENSDLAG00005018219)	ENSDLAG00005030660	tomm20b (ENSDLAG00005028903)	ENSDLAG00005031589	tbce (ENSDLAG00005033374) ##22	ENSDLAG00005018689	ENSDLAG00005034598	ENSDLAG00005034767	ENSDLAG00005005234	ENSDLAG00005018096	ENSDLAG00005031784	tbce (ENSDLAG00005011361) ##22	ENSDLAG00005029044	NID1 (ENSDLAG00005019474)	GPR137B (ENSDLAG00005019460)	ENSDLAG00005031823	ENSDLAG00005034239	ENSDLAG00005028668	ero1b (ENSDLAG00005019324)	ENSDLAG00005026597	ENSDLAG00005018501	ENSDLAG00005018606	ENSDLAG00005029065	ENSDLAG00005018807	ENSDLAG00005033986	ENSDLAG00005018217	ENSDLAG00005031674
European seabass	MODERN SPECIES	19	ENSDLAG00005026596	ENSDLAG00005029403	ENSDLAG00005003551 ##22	ENSDLAG00005004838	ENSDLAG00005032703	ENSDLAG00005001698	ENSDLAG00005033652	ENSDLAG00005034437	ENSDLAG00005033243	ENSDLAG00005027525	ENSDLAG00005018273	map1lc3c (ENSDLAG00005018219)	ENSDLAG00005030660	tomm20b (ENSDLAG00005028903)	ENSDLAG00005031589	tbce (ENSDLAG00005033374) ##22	ENSDLAG00005018689	ENSDLAG00005034598	ENSDLAG00005034767	ENSDLAG00005005234	ENSDLAG00005018096	ENSDLAG00005031784	tbce (ENSDLAG00005011361) ##22	ENSDLAG00005029044	NID1 (ENSDLAG00005019474)	GPR137B (ENSDLAG00005019460)	ENSDLAG00005031823	ENSDLAG00005034239	ENSDLAG00005028668	ero1b (ENSDLAG00005019324)	ENSDLAG00005026597
European seabass	MODERN SPECIES	19	ENSDLAG00005034598	ENSDLAG00005018689	tbce (ENSDLAG00005033374) ##22	ENSDLAG00005031589	tomm20b (ENSDLAG00005028903)	ENSDLAG00005030660	map1lc3c (ENSDLAG00005018219)	ENSDLAG00005018273	ENSDLAG00005027525	ENSDLAG00005033243	ENSDLAG00005034437	ENSDLAG00005033652	ENSDLAG00005001698	ENSDLAG00005032703	ENSDLAG00005004838	ENSDLAG00005003551 ##22	ENSDLAG00005029403	ENSDLAG00005026596	ENSDLAG00005032700	ENSDLAG00005014777	ENSDLAG00005014767	ENSDLAG00005032035	ENSDLAG00005034107	ENSDLAG00005019929	ENSDLAG00005028650	ENSDLAG00005028886	ENSDLAG00005033613	ENSDLAG00005029394	ENSDLAG00005014714
Large yellow croaker	MODERN SPECIES	481	prokr1a (ENSLCRG00005017781)	snrpb2 (ENSLCRG00005017778)	KIF16B (ENSLCRG00005017763)	gas8 (ENSLCRG00005017751)	ndufaf5 (ENSLCRG00005017664)	ENSLCRG00005017662	acaa1 (ENSLCRG00005017657)	btbd3a (ENSLCRG00005017654)	ENSLCRG00005015752	ENSLCRG00005015745	strn (ENSLCRG00005015246)	map1lc3c (ENSLCRG00005015235)	irf2bp2b (ENSLCRG00005015234)	tomm20b (ENSLCRG00005015232)	rbm34 (ENSLCRG00005015231)	tbce (ENSLCRG00005015214) ##22	NID1 (ENSLCRG00005015198)	ENSLCRG00005015194	ero1b (ENSLCRG00005014434)	ENSLCRG00005014412	gtpbp2b (ENSLCRG00005014409)	tp53bp2b (ENSLCRG00005014407)	rrp36 (ENSLCRG00005014405)	ENSLCRG00005014404	MGAT5B (ENSLCRG00005014397)	ENSLCRG00005014396	ENSLCRG00005014395	DDX39A (ENSLCRG00005014382)	EVI5L (ENSLCRG00005012983)	ENSLCRG00005012978	g-lysozyme (ENSLCRG00005012977)
Gilthead seabream	MODERN SPECIES		ndufaf5 (ENSSAUG00010012237)	esf1 (ENSSAUG00010012175)	acaa1 (ENSSAUG00010012141)	ENSSAUG00010012133	ENSSAUG00010012126	btbd3a (ENSSAUG00010012119)	ENSSAUG00010012116	ENSSAUG00010012113	ENSSAUG00010012110	strn (ENSSAUG00010010507)	ENSSAUG00010010500	map1lc3c (ENSSAUG00010010493)	irf2bp2b (ENSSAUG00010010489)	tomm20b (ENSSAUG00010010484)	rbm34 (ENSSAUG00010010478)	tbce (ENSSAUG00010010467) ##22	NID1 (ENSSAUG00010010447)	ENSSAUG00010010445	ENSSAUG00010010444	ENSSAUG00010010443	ENSSAUG00010010437	ENSSAUG00010010434	ero1b (ENSSAUG00010010429)	ENSSAUG00010010426	ENSSAUG00010010424	gtpbp2b (ENSSAUG00010010422)	tp53bp2b (ENSSAUG00010008937)	ENSSAUG00010008910	ENSSAUG00010008907	ENSSAUG00010008904	ENSSAUG00010008903
Perciformes	ANCESTRAL SPECIES	2	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT00940000155636.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000160954	ENSGT00940000154196.b
Perciformes_a	ANCESTRAL SPECIES		ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.b.a.b.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Channel bull blenny	MODERN SPECIES		snrpb2 (ENSCGOG00000000046)	KIF16B (ENSCGOG00000000047)	gas8 (ENSCGOG00000000048)	ndufaf5 (ENSCGOG00000000050)	esf1 (ENSCGOG00000000051)	acaa1 (ENSCGOG00000000052)	btbd3a (ENSCGOG00000000053)	strn (ENSCGOG00000000054)	irf2bp2b (ENSCGOG00000000055)	tomm20b (ENSCGOG00000000056)	ENSCGOG00000000057	ENSCGOG00000000058	ENSCGOG00000000059	ENSCGOG00000000060	rbm34 (ENSCGOG00000000061)	tbce (ENSCGOG00000000062) ##22	NID1 (ENSCGOG00000000063)	GPR137B (ENSCGOG00000000251)	ero1b (ENSCGOG00000000281)	ENSCGOG00000000329	ENSCGOG00000000346	ENSCGOG00000000413	gtpbp2b (ENSCGOG00000000439)	tp53bp2b (ENSCGOG00000000577)	rrp36 (ENSCGOG00000000590)	JAG1 (ENSCGOG00000000763)	ENSCGOG00000001128	ENSCGOG00000001130	ENSCGOG00000001136	HNRNPLL (ENSCGOG00000001147)	ATL2 (ENSCGOG00000001232)
Pike perch	MODERN SPECIES	164	ENSSLUG00000003022	ENSSLUG00000003005	ENSSLUG00000002992	ENSSLUG00000002971	ENSSLUG00000002920	harbi2 (ENSSLUG00000002904)	ENSSLUG00000023890	ENSSLUG00000023870	ENSSLUG00000023858	ENSSLUG00000023852	ENSSLUG00000023847	ENSSLUG00000023844	ENSSLUG00000023842	ENSSLUG00000023839	rbm34 (ENSSLUG00000023829)	tbce (ENSSLUG00000023822) ##22
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00390000004284.f	ENSGT00390000012248	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.b.i.a.b	ENSGT00940000155636.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT00940000163836.a	ENSGT00940000160954	ENSGT00940000154196.b
Stickleback	DUPLICATION
Stickleback	MODERN SPECIES	4	APLF (ENSGACG00000019678)	prokr1a (ENSGACG00000019681)	snrpb2 (ENSGACG00000019682)	KIF16B (ENSGACG00000019684)	ENSGACG00000019687	ndufaf5 (ENSGACG00000019689)	esf1 (ENSGACG00000019693)	acaa1 (ENSGACG00000019695)	btbd3a (ENSGACG00000019704)	strn (ENSGACG00000019707)	map1lc3c (ENSGACG00000019711)	ENSGACG00000019713	tomm20b (ENSGACG00000019714)	ENSGACG00000019715	ENSGACG00000019716	tbce (ENSGACG00000019717) ##22	NID1 (ENSGACG00000019719)	ENSGACG00000019722	ENSGACG00000019723	ero1b (ENSGACG00000019726)	ENSGACG00000019727	ENSGACG00000019728	gtpbp2b (ENSGACG00000019729)	tp53bp2b (ENSGACG00000019730)	otx2a (ENSGACG00000019733)	ENSGACG00000019734	USP34 (ENSGACG00000019735)	XPO1 (ENSGACG00000019736)	ENSGACG00000019737	ENSGACG00000019738	cct4 (ENSGACG00000019739)
Stickleback	MODERN SPECIES	189							ENSGACG00000001031	ENSGACG00000001032	ENSGACG00000001033	ENSGACG00000001034	ENSGACG00000001036	ENSGACG00000001037	ENSGACG00000001038	rbm34 (ENSGACG00000001040)	ENSGACG00000001044	tbce (ENSGACG00000001045) ##22	ENSGACG00000001047	ENSGACG00000001051	ENSGACG00000001053	ENSGACG00000001054	ENSGACG00000001057
Lumpfish	MODERN SPECIES		btbd3a (ENSCLMG00005012333)	ENSCLMG00005012332	strn (ENSCLMG00005011651)	map1lc3c (ENSCLMG00005011649)	irf2bp2b (ENSCLMG00005011648)	ENSCLMG00005011647	tomm20b (ENSCLMG00005011645)	ENSCLMG00005011644	ENSCLMG00005011643	ENSCLMG00005011642	ENSCLMG00005011641	ENSCLMG00005011640	ENSCLMG00005011639	ENSCLMG00005011638	rbm34 (ENSCLMG00005011637)	tbce (ENSCLMG00005011634) ##22	NID1 (ENSCLMG00005011540)	ENSCLMG00005011536	ero1b (ENSCLMG00005011532)	ENSCLMG00005011530	ENSCLMG00005011529	ENSCLMG00005011527	ENSCLMG00005011526	ENSCLMG00005011525	ENSCLMG00005011524	ENSCLMG00005011523	tp53bp2b (ENSCLMG00005011513)	ENSCLMG00005011511	ENSCLMG00005010394	ENSCLMG00005010388	ENSCLMG00005010387
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Anabantoidei	ANCESTRAL SPECIES		ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Climbing perch	MODERN SPECIES		snrpb2 (ENSATEG00000016157)	ENSATEG00000016198	ENSATEG00000016278	ndufaf5 (ENSATEG00000025747)	esf1 (ENSATEG00000016321)	ENSATEG00000016334	btbd3a (ENSATEG00000016380)	ENSATEG00000016404	map1lc3c (ENSATEG00000016457)	ENSATEG00000016477	ENSATEG00000027122	ENSATEG00000016507	ENSATEG00000016524	tomm20b (ENSATEG00000027344)	rbm34 (ENSATEG00000016567)	tbce (ENSATEG00000016581) ##22	NID1 (ENSATEG00000016612)	ENSATEG00000016758	ero1b (ENSATEG00000016786)	ENSATEG00000016852	ENSATEG00000016900	ENSATEG00000016911	ENSATEG00000016925	ENSATEG00000016946	ENSATEG00000016970	ENSATEG00000017069	ENSATEG00000017071	ENSATEG00000017111	ENSATEG00000017166	ENSATEG00000017415	ENSATEG00000017437
Siamese fighting fish	MODERN SPECIES		ENSBSLG00000003584	prokr1a (ENSBSLG00000003664)	snrpb2 (ENSBSLG00000003708)	KIF16B (ENSBSLG00000004029)	ENSBSLG00000004483	ndufaf5 (ENSBSLG00000004485)	esf1 (ENSBSLG00000004492)	map1lc3c (ENSBSLG00000004865)	strn (ENSBSLG00000005350)	btbd3a (ENSBSLG00000005934)	acaa1 (ENSBSLG00000005943)	irf2bp2b (ENSBSLG00000005959)	ENSBSLG00000005963	tomm20b (ENSBSLG00000006293)	rbm34 (ENSBSLG00000006390)	tbce (ENSBSLG00000006604) ##22	ENSBSLG00000007077	ero1b (ENSBSLG00000007251)	gtpbp2b (ENSBSLG00000007477)	rrp36 (ENSBSLG00000007544)	ENSBSLG00000007546	ENSBSLG00000007548	SLC29A1 (ENSBSLG00000007550)	ENSBSLG00000007568	ENSBSLG00000007571	sos1 (ENSBSLG00000007577)	tmem178a (ENSBSLG00000007615)	ENSBSLG00000007620	ENSBSLG00000007623	ENSBSLG00000007627	ENSBSLG00000007628
Zig-zag eel	MODERN SPECIES	39	ENSMAMG00000018548	ENSMAMG00000018627	ndufaf5 (ENSMAMG00000018635)	esf1 (ENSMAMG00000018648)	ENSMAMG00000018695	btbd3a (ENSMAMG00000025397)	ENSMAMG00000018746	map1lc3c (ENSMAMG00000018790)	ENSMAMG00000018801	ENSMAMG00000026490	ENSMAMG00000025287	ENSMAMG00000025517	ENSMAMG00000026883	tomm20b (ENSMAMG00000018841)	rbm34 (ENSMAMG00000018828)	tbce (ENSMAMG00000018856) ##22	NID1 (ENSMAMG00000018873)	ENSMAMG00000018878	ero1b (ENSMAMG00000018900)	ENSMAMG00000027259	ENSMAMG00000018933	ENSMAMG00000018976	ENSMAMG00000019157	ENSMAMG00000019186	ENSMAMG00000019237	ENSMAMG00000026182	ENSMAMG00000019241	ENSMAMG00000019277	ENSMAMG00000019288	ENSMAMG00000019308	ENSMAMG00000019327
Carangaria	ANCESTRAL SPECIES		ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Carangaria_A	ANCESTRAL SPECIES	42	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT01040000240400.c.a.b.a.b.a.a.b.a.b.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a.f	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT00950000182772.A.b	ENSGT01100000263529.a.a.a.b.a.a.b
Seriola	ANCESTRAL SPECIES	80	ENSGT00390000012248.m	ENSGT00390000010591	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000155636.b.a	ENSGT00940000153463.b.b	ENSGT00530000064271	ENSGT00940000160148	ENSGT01100000263621	ENSGT00940000176873	ENSGT00940000154922.a.e	ENSGT01030000234642.a.b.b.d.a.f	ENSGT00940000155710.b	ENSGT00940000157560.d.a	ENSGT01100000263513.a.a.b.b.b.b.a.a.b.a.b.a.b.a.c.a.b.a.a.b	ENSGT00950000182772.A.b
Yellowtail amberjack	MODERN SPECIES	2195															rbm34 (ENSSLDG00000000796)	tbce (ENSSLDG00000001028) ##22
Greater amberjack	MODERN SPECIES	116	snrpb2 (ENSSDUG00000019667)	KIF16B (ENSSDUG00000019553)	gas8 (ENSSDUG00000019514)	ndufaf5 (ENSSDUG00000019500)	esf1 (ENSSDUG00000019460)	acaa1 (ENSSDUG00000019413)	btbd3a (ENSSDUG00000019394)	ENSSDUG00000019383	strn (ENSSDUG00000019364)	map1lc3c (ENSSDUG00000019330)	irf2bp2b (ENSSDUG00000019293)	ENSSDUG00000019291	ENSSDUG00000019275	tomm20b (ENSSDUG00000019263)	rbm34 (ENSSDUG00000019237)	tbce (ENSSDUG00000019199) ##22	NID1 (ENSSDUG00000019168)	GPR137B (ENSSDUG00000019152)	ero1b (ENSSDUG00000019119)	ENSSDUG00000019082	ENSSDUG00000019065	ENSSDUG00000019033	ENSSDUG00000019016	gtpbp2b (ENSSDUG00000018968)	tp53bp2b (ENSSDUG00000018935)	rrp36 (ENSSDUG00000018924)	JAG1 (ENSSDUG00000018867)	ENSSDUG00000018858	ENSSDUG00000018850	ENSSDUG00000018840	ENSSDUG00000018808
Barramundi perch	MODERN SPECIES	432	KIF16B (ENSLCAG00010011982)	gas8 (ENSLCAG00010011928)	ndufaf5 (ENSLCAG00010011921)	ENSLCAG00010011914	ENSLCAG00010011908	acaa1 (ENSLCAG00010011755)	btbd3a (ENSLCAG00010011741)	esf1 (ENSLCAG00010011734)	strn (ENSLCAG00010011653)	map1lc3c (ENSLCAG00010011602)	irf2bp2b (ENSLCAG00010011595)	ENSLCAG00010011579	ENSLCAG00010011572	tomm20b (ENSLCAG00010011568)	rbm34 (ENSLCAG00010011565)	tbce (ENSLCAG00010011560) ##22	NID1 (ENSLCAG00010011107)
Pleuronectoidei	ANCESTRAL SPECIES	87	ENSGT00390000010591	ENSGT01060000249238	ENSGT00940000170452	ENSGT00390000007046.a	ENSGT00940000162838.g.a	ENSGT00390000009477.t	ENSGT00390000014687	ENSGT00390000004881	ENSGT01030000234626.C	ENSGT00940000167000	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a
Tongue sole	MODERN SPECIES	19	acaa1 (ENSCSEG00000001149)	btbd3a (ENSCSEG00000001145)	strn (ENSCSEG00000001135)	map1lc3c (ENSCSEG00000001128)	irf2bp2b (ENSCSEG00000001117)	ero1b (ENSCSEG00000001101)	GPR137B (ENSCSEG00000001094)	JAG1 (ENSCSEG00000001045)	RRP36 (ENSCSEG00000001039)	ENSCSEG00000001036	ENSCSEG00000001029	gtpbp2b (ENSCSEG00000001025)	ENSCSEG00000001023	tomm20b (ENSCSEG00000001016)	rbm34 (ENSCSEG00000000993)	tbce (ENSCSEG00000000986) ##22	NID1 (ENSCSEG00000000973)	ENSCSEG00000000970	ENSCSEG00000000968	slc22a7a (ENSCSEG00000000961)	ENSCSEG00000000912	ATL2 (ENSCSEG00000000888)	ENSCSEG00000000593	ENSCSEG00000000581	ENSCSEG00000000579	rcor3 (ENSCSEG00000000571)	kcnh1b (ENSCSEG00000000566)	tpcn3 (ENSCSEG00000000553)	ENSCSEG00000000546	ENSCSEG00000000510	ENSCSEG00000000500
Turbot	MODERN SPECIES	20	rcor3 (ENSSMAG00000021156)	ENSSMAG00000021157	ENSSMAG00000021158	ENSSMAG00000021159	ENSSMAG00000021160	ENSSMAG00000021161	ENSSMAG00000020991	ENSSMAG00000020988	ENSSMAG00000020964	ENSSMAG00000020962	ENSSMAG00000020961	map1lc3c (ENSSMAG00000020959)	ENSSMAG00000020957	tomm20b (ENSSMAG00000020956)	rbm34 (ENSSMAG00000020955)	tbce (ENSSMAG00000020949) ##22	NID1 (ENSSMAG00000020946)	ENSSMAG00000020945	ero1b (ENSSMAG00000020943)	ENSSMAG00000020942	ENSSMAG00000020926	ENSSMAG00000020922	ENSSMAG00000031291	ENSSMAG00000028308	ENSSMAG00000020911	ENSSMAG00000035601	ENSSMAG00000030773	ENSSMAG00000026077	PET117 (ENSSMAG00000021026)	kat14 (ENSSMAG00000021027)	DZANK1 (ENSSMAG00000021028)
Tiger tail seahorse	MODERN SPECIES	389	AARS2 (ENSHCOG00000011515)	ENSHCOG00000011489	ENSHCOG00000011472	ENSHCOG00000011465	tmem178a (ENSHCOG00000011375)	soul4 (ENSHCOG00000011358)	eif4a3 (ENSHCOG00000011335)	SRF (ENSHCOG00000011310)	SLC29A1 (ENSHCOG00000011285)	ENSHCOG00000011216	ENSHCOG00000010598	cln8 (ENSHCOG00000010469)	tpcn3 (ENSHCOG00000010437)	pgap4 (ENSHCOG00000000321)	rbm34 (ENSHCOG00000010393)	tbce (ENSHCOG00000010369) ##22	ero1b (ENSHCOG00000010360)	gtpbp2b (ENSHCOG00000010318)	rrp36 (ENSHCOG00000010303)	ENSHCOG00000010275	snrpb2 (ENSHCOG00000010260)	ENSHCOG00000010237	ENSHCOG00000010222	ndufaf5 (ENSHCOG00000010195)	ENSHCOG00000010160	ENSHCOG00000010148	irf2bp2a (ENSHCOG00000010127)	tomm20b (ENSHCOG00000010095)	ENSHCOG00000010075	cnrip1a (ENSHCOG00000010066)	ppp3r1a (ENSHCOG00000010049)
Pinecone sodierfish	MODERN SPECIES		ENSMMDG00005008491	ppp3r1b (ENSMMDG00005008478)	cnrip1a (ENSMMDG00005008472)	ENSMMDG00005008468	snrpb2 (ENSMMDG00005008460)	ENSMMDG00005008402	ndufaf5 (ENSMMDG00005008365)	esf1 (ENSMMDG00005008361)	ENSMMDG00005008307	strn (ENSMMDG00005007845)	map1lc3c (ENSMMDG00005007826)	irf2bp2b (ENSMMDG00005007824)	ENSMMDG00005007822	ENSMMDG00005007820	rbm34 (ENSMMDG00005007819)	tbce (ENSMMDG00005007817) ##22	NID1 (ENSMMDG00005007354)	ENSMMDG00005007337	ero1b (ENSMMDG00005006448)	gtpbp2b (ENSMMDG00005006402)	tp53bp2b (ENSMMDG00005006382)	ncapd3 (ENSMMDG00005006117)	ENSMMDG00005006093	ENSMMDG00005006090	ENSMMDG00005006087	ENSMMDG00005006085	ENSMMDG00005006082	ENSMMDG00005006079	ENSMMDG00005006074	JAG1 (ENSMMDG00005002850)	ENSMMDG00005008301
Cod	MODERN SPECIES	16	ENSGMOG00000025710	ndufaf5 (ENSGMOG00000028014)	ENSGMOG00000033633	ENSGMOG00000023431	ENSGMOG00000015595	esf1 (ENSGMOG00000015619)	btbd3a (ENSGMOG00000024273)	ENSGMOG00000034085	ENSGMOG00000018360	ENSGMOG00000023670	strn (ENSGMOG00000010979)	map1lc3c (ENSGMOG00000011624)	ENSGMOG00000011645	tomm20b (ENSGMOG00000011662)	rbm34 (ENSGMOG00000011683)	tbce (ENSGMOG00000011693) ##22	ENSGMOG00000015682	ENSGMOG00000011702	ENSGMOG00000014468	ENSGMOG00000005563	psen2 (ENSGMOG00000011816)	ENSGMOG00000011824	spast (ENSGMOG00000011826)	ENSGMOG00000011837	ENSGMOG00000024413	ENSGMOG00000025638	RBBP9 (ENSGMOG00000000207)	polr3f (ENSGMOG00000000206)	dzank1 (ENSGMOG00000029126)	kat14 (ENSGMOG00000009220)	PET117 (ENSGMOG00000024053)
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	116	ENSGT00940000160148	ENSGT01100000263871	ENSGT00950000182886.b.a.b	ENSGT00940000157923	ENSGT00390000008808.r.a	ENSGT00970000197675	ENSGT00940000156258.f.b	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b.o.b	ENSGT00530000063405.a.z ##22	ENSGT00390000011698.c.a.b.p	ENSGT00390000011249	ENSGT00530000063405.a.y ##22	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00390000004881	ENSGT00390000014687	ENSGT00940000162838.g.a	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00990000212397	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b	ENSGT00390000009597.d	ENSGT00940000156327.l.p	ENSGT00940000156841.a.b
Salmoninae	ANCESTRAL SPECIES	650			ENSGT00940000166212.b.a	ENSGT00950000182886.b.a.b.l	ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00970000197675	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00530000063405.a.y ##22
Salmoninae_a	ANCESTRAL SPECIES	387														ENSGT00390000011698.c.a.b.o.b.b	ENSGT00390000011249.p.b	ENSGT00530000063405.a.y ##22
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT01100000263871.b.b	ENSGT01100000263621.c	ENSGT00950000182886.b.a.b.l	ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00970000197675	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b.m	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00390000011249.p.b	ENSGT00530000063405.a.y ##22	ENSGT00530000063405.a.z.c ##22	ENSGT00940000154063.C.a.a.b.i.a	ENSGT00940000156318.b.b.g	ENSGT00940000163301.c.a.a.a.g.a	ENSGT00940000153986.b.a.u.b.b.b	ENSGT00390000007753.a.m.a	ENSGT00940000156461.o.a	ENSGT00390000004881.ac.b	ENSGT00390000014687.c	ENSGT00940000162838.g.a.c.a	ENSGT00390000007046.a.e.a	ENSGT00940000170452	ENSGT00390000012248.i	ENSGT00390000004284.f.f	ENSGT00940000156530.c.`b.b.g.a
Oncorhynchus_a	ANCESTRAL SPECIES	38					ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00970000197675	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b.m	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00530000063405.a.y ##22	ENSGT00530000063405.a.z.c ##22	ENSGT00940000154063.C.a.a.b.i.a	ENSGT00940000156318.b.b.g	ENSGT00940000163301.c.a.a.a.g.a	ENSGT00940000153986.b.a.u.b.b.b	ENSGT00390000007753.a.m.a	ENSGT00940000156461.o.a	ENSGT00390000004881.ac.b	ENSGT00390000014687.c	ENSGT00940000162838.g.a.c.a	ENSGT00390000007046.a.e.a	ENSGT00940000170452	ENSGT00390000012248.i	ENSGT00390000004284.f.f	ENSGT00940000156530.c.`b.b.g.a
Coho salmon	MODERN SPECIES	12	ENSOKIG00005013822	srd5a2a (ENSOKIG00005013836)	ENSOKIG00005013851	psen2 (ENSOKIG00005013858)	dpy30 (ENSOKIG00005013888)	ENSOKIG00005013900	spast (ENSOKIG00005013940)	ENSOKIG00005015219	CAT (ENSOKIG00005015254)	opn6a (ENSOKIG00005015360)	ENSOKIG00005015365	STRN (ENSOKIG00005015455)	map1lc3c (ENSOKIG00005016789)	IRF2BP2 (ENSOKIG00005016797)	ENSOKIG00005016815	ENSOKIG00005016880 ##22	rbm34 (ENSOKIG00005016889)	ENSOKIG00005017025	NID1 (ENSOKIG00005018875)	ENSOKIG00005019441	ENSOKIG00005019643	ero1b (ENSOKIG00005019669)	ENSOKIG00005019773	ENSOKIG00005019787	NDUFAF5 (ENSOKIG00005019820)	ENSOKIG00005019978	snrpb2 (ENSOKIG00005020115)	prokr1a (ENSOKIG00005020143)	fbxo48 (ENSOKIG00005020152)	cnrip1a (ENSOKIG00005020161)	PPP3R1 (ENSOKIG00005020178)
Rainbow trout	MODERN SPECIES	4	DPY30 (ENSOMYG00000062974)	ENSOMYG00000042796	spast (ENSOMYG00000042783)	ifm3 (ENSOMYG00000064316)	ENSOMYG00000042751	ENSOMYG00000068990	ENSOMYG00000064000	iip (ENSOMYG00000049519)	ENSOMYG00000041974	opn6a (ENSOMYG00000041893)	ENSOMYG00000040499	map1lc3c (ENSOMYG00000040151)	ENSOMYG00000055000	ENSOMYG00000040114	ENSOMYG00000051113	ENSOMYG00000040101 ##22	ENSOMYG00000056518	ENSOMYG00000039513	NID1 (ENSOMYG00000038614)	ENSOMYG00000038314	ENSOMYG00000038268	ero1b (ENSOMYG00000038152)	ENSOMYG00000038047	esf1 (ENSOMYG00000038032)	ENSOMYG00000037978	ENSOMYG00000037879	snrpb2 (ENSOMYG00000037727)	ENSOMYG00000037708	fbxo48 (ENSOMYG00000037703)	cnrip1a (ENSOMYG00000037698)	PPP3R1 (ENSOMYG00000037628)
Huchen	MODERN SPECIES	240														ENSHHUG00000041536	rbm34 (ENSHHUG00000041566)	ENSHHUG00000041585 ##22	ENSHHUG00000041596	ENSHHUG00000041619	NID1 (ENSHHUG00000042793)	ENSHHUG00000042843	ero1b (ENSHHUG00000042983)	GPR137B (ENSHHUG00000043052)	ENSHHUG00000043054	esf1 (ENSHHUG00000043060)	ndufaf5 (ENSHHUG00000043066)	KIF16B (ENSHHUG00000043069)	ENSHHUG00000043111	ENSHHUG00000043122	ENSHHUG00000043131	fbxo48 (ENSHHUG00000043132)	cnrip1a (ENSHHUG00000043133)
Protacanthopterygii	ANCESTRAL SPECIES	116				ENSGT00940000160148	ENSGT01100000263871	ENSGT00950000182886.b.a.b	ENSGT00940000157923	ENSGT00390000008808.r.a	ENSGT00970000197675	ENSGT00940000156258.f.b	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b.o.b	ENSGT00530000063405.a.z ##22	ENSGT00390000011698.c.a.b.p	ENSGT00390000011249	ENSGT00530000063405.a.y ##22	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00390000004881	ENSGT00390000014687	ENSGT00940000162838.g.a	ENSGT00390000007046.a	ENSGT00940000170452	ENSGT00990000212397	ENSGT00390000010591	ENSGT00390000012248	ENSGT00390000004284.f	ENSGT00940000156530.c.`b.b
Salmoninae	ANCESTRAL SPECIES	411		ENSGT00940000160148.l.a	ENSGT01100000263871.b.a	ENSGT00940000166212.b.b	ENSGT00950000182886.b.a.b.k	ENSGT00940000157923.f	ENSGT00390000008808.r.a.c	ENSGT00940000156258.f.b.a	ENSGT00390000018100.y.b.b	ENSGT01100000263524.G.f.b.h	ENSGT00950000183095.a.b.a.b.b.a.i	ENSGT00940000166218.j	ENSGT00940000160591.a.a.c	ENSGT00390000011698.c.a.b.o.b.a	ENSGT00390000011249	ENSGT00530000063405.a.z ##22	ENSGT00940000154063.C.a.a.b.i.b	ENSGT00940000156318.b.b.h	ENSGT00940000163301.c.a.a.a.g.b	ENSGT00940000156207.a.a.b.a.b.a.b	ENSGT00940000153986.b.a.u.b.b.a	ENSGT00390000007753.a.m.b	ENSGT00940000156461.o.b	ENSGT00390000004881.ac.a	ENSGT00390000014687.d	ENSGT00940000162838.g.a.c.b	ENSGT00390000007046.a.f
Huchen	MODERN SPECIES	5167														ENSHHUG00000022278	ENSHHUG00000022313	tbce (ENSHHUG00000022322) ##22
Salmoninae_a	ANCESTRAL SPECIES	67	ENSGT00940000160148.l.a	ENSGT01100000263871.b.a	ENSGT01100000263621	ENSGT00950000182886.b.a.b.k	ENSGT00940000157923.f	ENSGT00390000008808.r.a.c	ENSGT00940000156258.f.b.a	ENSGT00950000182857.a.b.n	ENSGT00390000018100.y.b.b	ENSGT01100000263524.G.f.b.h	ENSGT00950000183095.a.b.a.b.b.a.i	ENSGT00940000166218.j	ENSGT00940000160591.a.a.c	ENSGT00390000011698.c.a.b.o.b.a	ENSGT00390000011249.p.a	ENSGT00530000063405.a.z ##22	ENSGT00940000154063.C.a.a.b.i.b	ENSGT00940000156318.b.b.h	ENSGT00940000163301.c.a.a.a.g.b	ENSGT00940000156207.a.a.b.a.b.a.b	ENSGT00940000153986.b.a.u.b.b.a	ENSGT00390000007753.a.m.b	ENSGT00940000156461.o.b	ENSGT00390000004881.ac.a	ENSGT00390000014687.d	ENSGT00940000162838.g.a.c.b	ENSGT00390000007046.a.e.b	ENSGT00390000010591.k	ENSGT01100000263476.C.a.a.a.b.b.b	ENSGT00390000012248.j	ENSGT00390000004284.f.e
Salmo	DUPLICATION
Salmo	ANCESTRAL SPECIES	56	ENSGT00940000163496.b.b.b.a	ENSGT00940000166212.b.b	ENSGT01100000263871.b.a	ENSGT01100000263621	ENSGT00950000182886.b.a.b.k	ENSGT00940000157923.f	ENSGT00390000008808.r.a.c	ENSGT00940000156258.f.b.a	ENSGT00390000018100.y.b.b	ENSGT01100000263524.G.f.b.h	ENSGT00950000183095.a.b.a.b.b.a.i	ENSGT00940000166218.j	ENSGT00940000160591.a.a.c	ENSGT00390000011698.c.a.b.o.b.a	ENSGT00390000011249.p.a	ENSGT00530000063405.a.z.a ##22	ENSGT00940000154063.C.a.a.b.i.b	ENSGT00940000156318.b.b.h	ENSGT00940000163301.c.a.a.a.g.b	ENSGT00940000156207.a.a.b.a.b.a.b	ENSGT00940000153986.b.a.u.b.b.a	ENSGT00390000007753.a.m.b	ENSGT00940000156461.o.b	ENSGT00390000004881.ac.a	ENSGT00390000014687.d	ENSGT00940000162838.g.a.c.b	ENSGT00390000007046.a.e.b	ENSGT00390000010591.k	ENSGT01100000263476.C.a.a.a.b.b.b	ENSGT00390000012248.j	ENSGT00390000004284.f.e
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000052768	jag1a (ENSSSAG00000052091)	ENSSSAG00000113008	ENSSSAG00000111586	S5A2 (ENSSSAG00000051978)	psn2 (ENSSSAG00000051966)	DPY30 (ENSSSAG00000051955)	spast (ENSSSAG00000051691)	ENSSSAG00000051595	opn6a (ENSSSAG00000051578)	ENSSSAG00000044663	map1lc3c (ENSSSAG00000105099)	ENSSSAG00000044478	ENSSSAG00000044368	rbm34 (ENSSSAG00000044346)	tbce (ENSSSAG00000044294) ##22	ENSSSAG00000040346	ENSSSAG00000118111	NID1 (ENSSSAG00000098827)	ENSSSAG00000038095	ENSSSAG00000087375	ENSSSAG00000119807	ero1b (ENSSSAG00000069160)	ENSSSAG00000100243	esf1 (ENSSSAG00000069138)	ENSSSAG00000069132	ENSSSAG00000069013	snrpb2 (ENSSSAG00000068944)	ENSSSAG00000107393	ENSSSAG00000068926	ENSSSAG00000068923
River trout	MODERN SPECIES	5	ENSSTUG00000022637	jag1a (ENSSTUG00000022756)	ENSSTUG00000024333	ENSSTUG00000024347	srd5a2a (ENSSTUG00000024349)	psen2 (ENSSTUG00000024383)	dpy30 (ENSSTUG00000024421)	spast (ENSSTUG00000024606)	cat (ENSSTUG00000026899)	opn6a (ENSSTUG00000027881)	strn (ENSSTUG00000027945)	map1lc3c (ENSSTUG00000028937)	irf2bp2b (ENSSTUG00000028954)	ENSSTUG00000028962	rbm34 (ENSSTUG00000029037)	tbce (ENSSTUG00000029045) ##22	ENSSTUG00000029193	NID1 (ENSSTUG00000032853)	ENSSTUG00000033961	ENSSTUG00000033976	ero1b (ENSSTUG00000033996)	ENSSTUG00000034034	esf1 (ENSSTUG00000034056)	KIF16B (ENSSTUG00000034101)	snrpb2 (ENSSTUG00000034295)	APLF (ENSSTUG00000034342)	ENSSTUG00000034373	fbxo48 (ENSSTUG00000034385)	cnrip1a (ENSSTUG00000034391)	PPP3R1 (ENSSTUG00000034407)	etaa1a (ENSSTUG00000034507)
Salmo	ANCESTRAL SPECIES	37	ENSGT00950000183154.a.a	ENSGT00940000163496.b.b.b.b.a.a.a	ENSGT00940000166212.b.a	ENSGT00950000182886.b.a.b.l	ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b.m	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00390000011249.p.b	ENSGT00530000063405.a.z.b ##22	ENSGT00940000154063.C.a.a.b.i.a	ENSGT00940000156318.b.b.g	ENSGT00940000163301.c.a.a.a.g.a	ENSGT00940000153986.b.a.u.b.b.b	ENSGT00390000007753.a.m.a	ENSGT00940000156461.o.a	ENSGT00390000004881.ac.b	ENSGT00390000014687.c	ENSGT00940000162838.g.a.c.a	ENSGT00390000007046.a.e.a	ENSGT00940000166657.b	ENSGT00390000010591.l	ENSGT00390000012248.i	ENSGT00390000004284.f.f	ENSGT00940000156530.c.`b.b.h
Atlantic salmon	MODERN SPECIES	11	s5a2 (ENSSSAG00000044549)	psen2 (ENSSSAG00000044602)	dpy30 (ENSSSAG00000044712)	spast (ENSSSAG00000044816)	ENSSSAG00000046528	ENSSSAG00000085838	ENSSSAG00000046626	opn6a (ENSSSAG00000046862)	ENSSSAG00000046866	ENSSSAG00000046942	ENSSSAG00000096147	mlp3c (ENSSSAG00000049637)	i2b2a (ENSSSAG00000049651)	ENSSSAG00000049666	rbm34 (ENSSSAG00000049698)	ENSSSAG00000049716 ##22	ENSSSAG00000049802	ENSSSAG00000099849	NID1 (ENSSSAG00000051642)	ENSSSAG00000051769	ENSSSAG00000111690	ero1b (ENSSSAG00000051854)	btbd3 (ENSSSAG00000069147)	ENSSSAG00000103440	ENSSSAG00000052501	ENSSSAG00000052530	ENSSSAG00000052734	RU2B (ENSSSAG00000053481)	ENSSSAG00000114042	ENSSSAG00000081788	fbxo48 (ENSSSAG00000053532)
River trout	MODERN SPECIES	31	srd5a2a (ENSSTUG00000049340)	psen2 (ENSSTUG00000049336)	dpy30 (ENSSTUG00000049321)	spast (ENSSTUG00000049253)	ENSSTUG00000049235	ENSSTUG00000049232	ENSSTUG00000049229	cat (ENSSTUG00000048451)	opn6a (ENSSTUG00000048369)	ENSSTUG00000048358	strn (ENSSTUG00000047925)	map1lc3c (ENSSTUG00000047868)	IRF2BP2 (ENSSTUG00000047858)	ENSSTUG00000047833	rbm34 (ENSSTUG00000047825)	tbce (ENSSTUG00000047815) ##22	ENSSTUG00000046057	NID1 (ENSSTUG00000045544)	ENSSTUG00000045461	ENSSTUG00000045441	ENSSTUG00000045428	ero1b (ENSSTUG00000045370)	ENSSTUG00000045356	esf1 (ENSSTUG00000045309)	ndufaf5 (ENSSTUG00000045298)	KIF16B (ENSSTUG00000045176)	snrpb2 (ENSSTUG00000045143)	ENSSTUG00000045138	ENSSTUG00000045128	fbxo48 (ENSSTUG00000045114)	cnrip1a (ENSSTUG00000045100)
Oncorhynchus	DUPLICATION
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT01100000263621.c	ENSGT00950000182886.b.a.b.l	ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00970000197675	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b.m	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00390000011249.p.b	ENSGT00530000063405.a.y ##22	ENSGT00530000063405.a.z.c ##22	ENSGT00940000154063.C.a.a.b.i.a	ENSGT00940000156318.b.b.g	ENSGT00940000163301.c.a.a.a.g.a	ENSGT00940000153986.b.a.u.b.b.b	ENSGT00390000007753.a.m.a	ENSGT00940000156461.o.a	ENSGT00390000004881.ac.b	ENSGT00390000014687.c	ENSGT00940000162838.g.a.c.a	ENSGT00390000007046.a.e.a	ENSGT00940000170452	ENSGT00390000012248.i	ENSGT00390000004284.f.f	ENSGT00940000156530.c.`b.b.g.a	ENSGT00390000009597.d.e.a
Oncorhynchus_a	ANCESTRAL SPECIES	38				ENSGT00940000157923.e	ENSGT00390000008808.r.a.d	ENSGT00970000197675	ENSGT00940000156258.f.b.b	ENSGT00950000182857.a.b.m	ENSGT00390000018100.y.b.a	ENSGT01100000263524.G.f.b.g	ENSGT00950000183095.a.b.a.b.b.a.j	ENSGT00940000166218.i	ENSGT00940000160591.a.a.d	ENSGT00390000011698.c.a.b.o.b.b	ENSGT00530000063405.a.y ##22	ENSGT00530000063405.a.z.c ##22	ENSGT00940000154063.C.a.a.b.i.a	ENSGT00940000156318.b.b.g	ENSGT00940000163301.c.a.a.a.g.a	ENSGT00940000153986.b.a.u.b.b.b	ENSGT00390000007753.a.m.a	ENSGT00940000156461.o.a	ENSGT00390000004881.ac.b	ENSGT00390000014687.c	ENSGT00940000162838.g.a.c.a	ENSGT00390000007046.a.e.a	ENSGT00940000170452	ENSGT00390000012248.i	ENSGT00390000004284.f.f	ENSGT00940000156530.c.`b.b.g.a	ENSGT00390000009597.d.e.a
Chinook salmon	MODERN SPECIES	25	ENSOTSG00005028070	ENSOTSG00005028069	zgc:173585 (ENSOTSG00005028067)	ENSOTSG00005028066	ENSOTSG00005028063	TMEM63B (ENSOTSG00005027991)	ENSOTSG00005027985	ENSOTSG00005027984	srd5a2a (ENSOTSG00005027982)	cat (ENSOTSG00005027979)	opn6a (ENSOTSG00005027977)	strn (ENSOTSG00005024002)	map1lc3c (ENSOTSG00005023997)	IRF2BP2 (ENSOTSG00005023995)	ENSOTSG00005023977	tbce (ENSOTSG00005023976) ##22	ENSOTSG00005023813	NID1 (ENSOTSG00005022758)	ENSOTSG00005022692	ENSOTSG00005022689	ero1b (ENSOTSG00005021979)	ENSOTSG00005021978	esf1 (ENSOTSG00005021977)	ndufaf5 (ENSOTSG00005021890)	KIF16B (ENSOTSG00005021886)	snrpb2 (ENSOTSG00005021873)	prokr1a (ENSOTSG00005021865)	fbxo48 (ENSOTSG00005021864)	cnrip1a (ENSOTSG00005021863)	PPP3R1 (ENSOTSG00005021808)	etaa1a (ENSOTSG00005021779)
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000155704.bc.a	ENSGT00940000163496.b.b.b.a	ENSGT00940000166212.b.b	ENSGT00950000182886.b.a.b.k	ENSGT00940000157923.f	ENSGT00390000008808.r.a.c	ENSGT00940000156258.f.b.a	ENSGT00950000182857.a.b.n	ENSGT00390000018100.y.b.b	ENSGT01100000263524.G.f.b.h	ENSGT00950000183095.a.b.a.b.b.a.i	ENSGT00940000166218.j	ENSGT00940000160591.a.a.c	ENSGT00390000011698.c.a.b.o.b.a	ENSGT00390000011249.p.a	ENSGT00530000063405.a.z.d ##22	ENSGT00940000154063.C.a.a.b.i.b	ENSGT00940000156318.b.b.h	ENSGT00940000163301.c.a.a.a.g.b	ENSGT00940000156207.a.a.b.a.b.a.b	ENSGT00940000153986.b.a.u.b.b.a	ENSGT00390000007753.a.m.b	ENSGT00940000156461.o.b	ENSGT00390000004881.ac.a	ENSGT00390000014687.d	ENSGT00940000162838.g.a.c.b	ENSGT00390000007046.a.e.b	ENSGT01060000249238	ENSGT00390000012248.j	ENSGT00390000004284.f.e	ENSGT00940000156530.c.`b.b.g.b
Oncorhynchus_a	ANCESTRAL SPECIES	3	ENSGT00940000160148.l.a	ENSGT01100000263871.b.a	ENSGT01100000263621.d	ENSGT00950000182886.b.a.b.k	ENSGT00940000157923.f	ENSGT00390000008808.r.a.c	ENSGT00940000156258.f.b.a	ENSGT00950000182857.a.b.n	ENSGT00390000018100.y.b.b	ENSGT01100000263524.G.f.b.h	ENSGT00950000183095.a.b.a.b.b.a.i	ENSGT00940000166218.j	ENSGT00940000160591.a.a.c	ENSGT00390000011698.c.a.b.o.b.a	ENSGT00390000011249.p.a	ENSGT00530000063405.a.z.d ##22	ENSGT00940000154063.C.a.a.b.i.b	ENSGT00940000156318.b.b.h	ENSGT00940000163301.c.a.a.a.g.b	ENSGT00940000156207.a.a.b.a.b.a.b	ENSGT00940000153986.b.a.u.b.b.a	ENSGT00390000007753.a.m.b	ENSGT00940000156461.o.b	ENSGT00390000004881.ac.a	ENSGT00390000014687.d	ENSGT00940000162838.g.a.c.b	ENSGT00390000007046.a.e.b	ENSGT01060000249238	ENSGT00390000012248.j	ENSGT00390000004284.f.e	ENSGT00940000156530.c.`b.b.g.b
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005040258	jag1a (ENSOTSG00005034951)	ENSOTSG00005034920	srd5a2a (ENSOTSG00005034919)	psen2 (ENSOTSG00005034917)	dpy30 (ENSOTSG00005034915)	spast (ENSOTSG00005034903)	ENSOTSG00005034902	cat (ENSOTSG00005032666)	opn6a (ENSOTSG00005032615)	strn (ENSOTSG00005025914)	map1lc3c (ENSOTSG00005025897)	irf2bp2b (ENSOTSG00005025892)	ENSOTSG00005025891	rbm34 (ENSOTSG00005025890)	tbce (ENSOTSG00005025889) ##22	ENSOTSG00005025887	NID1 (ENSOTSG00005024908)	ENSOTSG00005010848	ENSOTSG00005010847	ENSOTSG00005010844	ero1b (ENSOTSG00005010838)	ENSOTSG00005010833	esf1 (ENSOTSG00005010830)	ndufaf5 (ENSOTSG00005010825)	KIF16B (ENSOTSG00005010818)	snrpb2 (ENSOTSG00005010811)	ENSOTSG00005010809	ENSOTSG00005010807	cnrip1a (ENSOTSG00005010806)	PPP3R1 (ENSOTSG00005010770)
Coho salmon	MODERN SPECIES		JAG1 (ENSOKIG00005030677)	ENSOKIG00005031529	ENSOKIG00005031535	srd5a2a (ENSOKIG00005026675)	psen2 (ENSOKIG00005026693)	dpy30 (ENSOKIG00005026720)	spast (ENSOKIG00005026865)	ENSOKIG00005029155	CAT (ENSOKIG00005029240)	opn6a (ENSOKIG00005030710)	strn (ENSOKIG00005030923)	map1lc3c (ENSOKIG00005034539)	irf2bp2b (ENSOKIG00005034552)	tomm20a (ENSOKIG00005034576)	rbm34 (ENSOKIG00005034637)	tbce (ENSOKIG00005034657) ##22	ENSOKIG00005034913	ENSOKIG00005039418	NID1 (ENSOKIG00005039551)	ENSOKIG00005040744	ENSOKIG00005040834	ENSOKIG00005040851	ENSOKIG00005040896	ENSOKIG00005040904	ero1b (ENSOKIG00005040936)	ENSOKIG00005041096	esf1 (ENSOKIG00005041139)	ndufaf5 (ENSOKIG00005041204)	ENSOKIG00005041263	KIF16B (ENSOKIG00005041310)	snrpb2 (ENSOKIG00005041545)
Rainbow trout	MODERN SPECIES	8	ENSOMYG00000070332	psen2 (ENSOMYG00000026474)	dpy30 (ENSOMYG00000026441)	spast (ENSOMYG00000024497)	iip2 (ENSOMYG00000024060)	ENSOMYG00000022258	opn6a (ENSOMYG00000021937)	ENSOMYG00000054720	ENSOMYG00000019663	map1lc3c (ENSOMYG00000021920)	ENSOMYG00000047794	ENSOMYG00000021909	ENSOMYG00000054956	ENSOMYG00000019257	rbm34 (ENSOMYG00000019156)	tbce (ENSOMYG00000019197) ##22	ENSOMYG00000052703	ENSOMYG00000018801	ENSOMYG00000076450	NID1 (ENSOMYG00000017588)	ENSOMYG00000017196	ENSOMYG00000072472	ENSOMYG00000017188	ENSOMYG00000017170	ENSOMYG00000017160	ENSOMYG00000072093	ENSOMYG00000059378	ERO1B (ENSOMYG00000017134)	ENSOMYG00000017103	ENSOMYG00000055198	esf1 (ENSOMYG00000022026)
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	8	psen2 (ENSELUG00000001236)	dpy30 (ENSELUG00000016048)	ENSELUG00000016063	spast (ENSELUG00000015998)	opn6a (ENSELUG00000015910)	strn (ENSELUG00000015878)	map1lc3c (ENSELUG00000015770)	ENSELUG00000027046	irf2bp2b (ENSELUG00000015749)	ENSELUG00000015731	rbm34 (ENSELUG00000015682)	tbce (ENSELUG00000015625) ##22	ENSELUG00000034045	ENSELUG00000026881	ENSELUG00000031618	tbce (ENSELUG00000032513) ##22	ENSELUG00000029564	NID1 (ENSELUG00000015166)	ENSELUG00000027799	ENSELUG00000015096	ENSELUG00000015018	ENSELUG00000029417	ENSELUG00000034075	GPR137B (ENSELUG00000014920)	ero1b (ENSELUG00000014862)	ENSELUG00000031386	ENSELUG00000030290	ENSELUG00000014774	ENSELUG00000014756	C17orf58 (ENSELUG00000014719)	BPTF (ENSELUG00000014687)
Northern pike	MODERN SPECIES	8	ptk7a (ENSELUG00000016427)	jag1a (ENSELUG00000016285)	ENSELUG00000016145	srd5a2a (ENSELUG00000016118)	psen2 (ENSELUG00000001236)	dpy30 (ENSELUG00000016048)	ENSELUG00000016063	spast (ENSELUG00000015998)	opn6a (ENSELUG00000015910)	strn (ENSELUG00000015878)	map1lc3c (ENSELUG00000015770)	ENSELUG00000027046	irf2bp2b (ENSELUG00000015749)	ENSELUG00000015731	rbm34 (ENSELUG00000015682)	tbce (ENSELUG00000015625) ##22	ENSELUG00000034045	ENSELUG00000026881	ENSELUG00000031618	tbce (ENSELUG00000032513) ##22	ENSELUG00000029564	NID1 (ENSELUG00000015166)	ENSELUG00000027799	ENSELUG00000015096	ENSELUG00000015018	ENSELUG00000029417	ENSELUG00000034075	GPR137B (ENSELUG00000014920)	ero1b (ENSELUG00000014862)	ENSELUG00000031386	ENSELUG00000030290
Otomorpha	ANCESTRAL SPECIES	457										ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b
Clupeiformes	ANCESTRAL SPECIES	472											ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a
Atlantic herring	MODERN SPECIES	16	EIF3B (ENSCHAG00000021545)	ENSCHAG00000021502	ENSCHAG00000021465	ENSCHAG00000021450	ttyh3b (ENSCHAG00000021123)	ENSCHAG00000020998	opn6a (ENSCHAG00000020990)	strn (ENSCHAG00000020390)	map1lc3c (ENSCHAG00000020353)	irf2bp2b (ENSCHAG00000020339)	ENSCHAG00000020286	ENSCHAG00000019908	MFAP4 (ENSCHAG00000019787)	MFAP4 (ENSCHAG00000019775)	rbm34 (ENSCHAG00000019673)	tbce (ENSCHAG00000019657) ##22	NID1 (ENSCHAG00000018896)	ENSCHAG00000018859	ero1b (ENSCHAG00000018099)	ENSCHAG00000018045	ENSCHAG00000018039	ENSCHAG00000018027	ENSCHAG00000018017	ENSCHAG00000018007	ENSCHAG00000017998	ctrl (ENSCHAG00000017968)	ENSCHAG00000017940	ENSCHAG00000017915	ENSCHAG00000017905	crtac1a (ENSCHAG00000017109)	ENSCHAG00000017046
Denticle herring	MODERN SPECIES	13	ENSDCDG00000010843	SDK1 (ENSDCDG00000005539)	GNA12 (ENSDCDG00000005485)	brat1 (ENSDCDG00000005484)	ENSDCDG00000005479	ENSDCDG00000005474	ttyh3b (ENSDCDG00000005471)	iqce (ENSDCDG00000005465)	ENSDCDG00000005462	opn6a (ENSDCDG00000001169)	strn (ENSDCDG00000001138)	map1lc3c (ENSDCDG00000001118)	irf2bp2b (ENSDCDG00000001115)	tomm20b (ENSDCDG00000001105)	rbm34 (ENSDCDG00000001100)	tbce (ENSDCDG00000001078) ##22	NID1 (ENSDCDG00000000544)	ENSDCDG00000000354	ero1b (ENSDCDG00000000301)	zgc:113162 (ENSDCDG00000000201)	NSMF (ENSDCDG00000024563)	ENSDCDG00000024546	ENSDCDG00000019137	clic3 (ENSDCDG00000018951)	FUT7 (ENSDCDG00000018946)	pou5f3 (ENSDCDG00000018945)	npdc1a (ENSDCDG00000018942)	ENSDCDG00000017957	slc31a2 (ENSDCDG00000017917)	niban2a (ENSDCDG00000017876)	stxbp1a (ENSDCDG00000017472)
Otophysi	ANCESTRAL SPECIES	391													ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b
Characiphysae	ANCESTRAL SPECIES	8	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156205.g	ENSGT00940000157771	ENSGT00940000156682.e.a	ENSGT00940000154876.a.a.a.a	ENSGT00940000154876.a.a.a.b	ENSGT00530000063712.a.a.o.a	ENSGT00530000063712.a.a.o.b.a.a	ENSGT00950000182940.b.a.a.g.b	ENSGT00940000154146.b.a	ENSGT00940000155645.i.b	ENSGT00390000015400
Channel catfish	MODERN SPECIES	1	ENSIPUG00000021621	si:dkey-93h22.8 (ENSIPUG00000021651)	ldb1b (ENSIPUG00000021664)	orc2 (ENSIPUG00000021681)	c10h21orf2 (ENSIPUG00000021692)	pfkl (ENSIPUG00000021701)	rpl37a (ENSIPUG00000021767)	eif4a3 (ENSIPUG00000021785)	opn6a (ENSIPUG00000021834)	STRN (ENSIPUG00000021850)	map1lc3c (ENSIPUG00000021896)	irf2bp2 (ENSIPUG00000021926)	ENSIPUG00000021929	tomm20b (ENSIPUG00000021935)	rbm34 (ENSIPUG00000021952)	tbce (ENSIPUG00000021983) ##22	nid1 (ENSIPUG00000022017)	gpr137b (ENSIPUG00000022038)	ero1b (ENSIPUG00000022054)	ENSIPUG00000022099	ENSIPUG00000022109	ENSIPUG00000022132	lrrc28 (ENSIPUG00000022158)	Igf1r (ENSIPUG00000022197)	ENSIPUG00000022242	ANPEP (ENSIPUG00000022254)	mespaa (ENSIPUG00000022281)	mespba (ENSIPUG00000022294)	Sv2b (ENSIPUG00000022299)	ENSIPUG00000022313	ENSIPUG00000022328
Characiphysae_b	ANCESTRAL SPECIES	4	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156205.g	ENSGT00940000157771	ENSGT00940000156682.e.a	ENSGT00940000154876.a.a.a.a	ENSGT00940000154876.a.a.a.b	ENSGT00530000063712.a.a.o.a	ENSGT00530000063712.a.a.o.b.a.a	ENSGT00950000182940.b.a.a.g.b	ENSGT00940000154146.b.a	ENSGT00940000155645.i.b	ENSGT00390000015400
Characoidei	ANCESTRAL SPECIES	18	ENSGT00390000011093	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228	ENSGT00390000018807	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00940000156318.b.b	ENSGT00940000153986.b.a.u.b	ENSGT00390000007753.a	ENSGT00940000156291.e	ENSGT00940000156291.f	ENSGT00940000156205.h	ENSGT00940000157771	ENSGT00940000156682.e.a	ENSGT00940000154876.a.a.a.a	ENSGT00940000154876.a.a.a.b	ENSGT00530000063712.a.a.o.a	ENSGT00530000063712.a.a.o.b.a.a	ENSGT00950000182940.b.a.a.g.b	ENSGT00940000154146.b.a.s	ENSGT00990000209097
Red-bellied piranha	MODERN SPECIES	82	ENSPNAG00000002953	nr5a2 (ENSPNAG00000013785)	PTPRC (ENSPNAG00000013739)	nek7 (ENSPNAG00000002888)	lhx9 (ENSPNAG00000013648)	si:dkey-121a9.3 (ENSPNAG00000013602)	DENND1B (ENSPNAG00000013596)	crb1 (ENSPNAG00000013567)	aspm (ENSPNAG00000013547)	cfhl4 (ENSPNAG00000002752)	strn (ENSPNAG00000013407)	map1lc3c (ENSPNAG00000002701)	irf2bp2b (ENSPNAG00000013291)	tomm20b (ENSPNAG00000002652)	rbm34 (ENSPNAG00000002639)	tbce (ENSPNAG00000013216) ##22	NID1 (ENSPNAG00000002616)	ero1b (ENSPNAG00000013189)	GPR137B (ENSPNAG00000013091)	ENSPNAG00000013040
Mexicana tetra	MODERN SPECIES	20	ldb1b (ENSAMXG00000012067)	ENSAMXG00000020816	CFAP410 (ENSAMXG00000034889)	pfklb (ENSAMXG00000020865)	zgc:171772 (ENSAMXG00000041482)	eif4a3 (ENSAMXG00000020882)	opn6a (ENSAMXG00000020921)	ENSAMXG00000035494	strn (ENSAMXG00000021069)	map1lc3c (ENSAMXG00000043525)	ENSAMXG00000040813	irf2bp2b (ENSAMXG00000021316)	tomm20b (ENSAMXG00000042169)	rbm34 (ENSAMXG00000021328)	ENSAMXG00000040370	tbce (ENSAMXG00000021338) ##22	NID1 (ENSAMXG00000021348)	GPR137B (ENSAMXG00000021361)	ero1b (ENSAMXG00000021371)	ENSAMXG00000021387	ENSAMXG00000021393	ENSAMXG00000029762	LRRC28 (ENSAMXG00000040593)	igf1rb (ENSAMXG00000021415)	ANPEP (ENSAMXG00000021446)	ANPEP (ENSAMXG00000031216)	ENSAMXG00000021464	ANPEP (ENSAMXG00000021468)	mespaa (ENSAMXG00000041487)	mespba (ENSAMXG00000040981)	sv2ba (ENSAMXG00000021489)
Electric eel	MODERN SPECIES	505									zgc:171772 (ENSEEEG00000001471)	eif4a3 (ENSEEEG00000001465)	strn (ENSEEEG00000001397)	map1lc3c (ENSEEEG00000001395)	irf2bp2b (ENSEEEG00000001394)	tomm20b (ENSEEEG00000001392)	rbm34 (ENSEEEG00000001390)	tbce (ENSEEEG00000001386) ##22	NID1 (ENSEEEG00000001285)	GPR137B (ENSEEEG00000001266)	ero1b (ENSEEEG00000000596)	MCTP2 (ENSEEEG00000000324)	ENSEEEG00000000295	ENSEEEG00000000285	LRRC28 (ENSEEEG00000000261)	igf1rb (ENSEEEG00000000219)	ANPEP (ENSEEEG00000000125)
Cyprinoidei	ANCESTRAL SPECIES	27	ENSGT00390000012872.b	ENSGT00390000007726.a.b	ENSGT00950000183137.a.l	ENSGT00390000005639.a.b.d.b	ENSGT00390000015228	ENSGT00390000018807	ENSGT00940000159292.v	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a	ENSGT00940000166218	ENSGT00940000160591.a.a	ENSGT00390000011698.c.a.b	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT01100000263538.A.a.a.b.b	ENSGT00390000013727.d.a	ENSGT01000000214413.b.a.a.q.a	ENSGT00940000155212.ab.a	ENSGT00390000005717.s	ENSGT00940000164897.a.b	ENSGT00940000158265	ENSGT00940000170852	ENSGT00940000154817.b.b.b.p	ENSGT00940000159862.b	ENSGT00940000159213.q.b	ENSGT00940000155984.i.b	ENSGT00940000157084.e.a	ENSGT00950000182898.a.a.a.a.b.g
Zebrafish	MODERN SPECIES	2	cant1b (ENSDARG00000102977)	ENSDARG00000103266	si:dkey-93h22.8 (ENSDARG00000098666)	ldb1b (ENSDARG00000103158)	ENSDARG00000101465	CFAP410 (ENSDARG00000099397)	pfklb (ENSDARG00000099755)	zgc:171772 (ENSDARG00000115271)	eif4a3 (ENSDARG00000102978)	opn6a (ENSDARG00000102430)	strn (ENSDARG00000100011)	map1lc3c (ENSDARG00000100528)	irf2bp2b (ENSDARG00000098635)	tomm20b (ENSDARG00000103566)	rbm34 (ENSDARG00000101877)	tbce (ENSDARG00000099921) ##22	NID1 (ENSDARG00000103129)	ENSDARG00000077608	ero1b (ENSDARG00000103915)	ENSDARG00000105317	mfn1b (ENSDARG00000079219)	il1rapl1b (ENSDARG00000104853)	srsf7b (ENSDARG00000101057)	LOXL4 (ENSDARG00000105442)	HNRNPLL (ENSDARG00000116101)	ENSDARG00000068453	gnb4b (ENSDARG00000115383)	SHROOM2 (ENSDARG00000076371)	clcn4 (ENSDARG00000035808)	ENSDARG00000113009	ENSDARG00000115906
Cyprininae	ANCESTRAL SPECIES	476							ENSGT01000000219139	ENSGT00390000005639.a.b.d.b.a.a	ENSGT00390000015228	ENSGT00390000018807	ENSGT00940000159292.u.b	ENSGT00940000166218.d	ENSGT00940000160591.a.a.b	ENSGT00390000011698.c.a.b.n	ENSGT00390000011249	ENSGT00530000063405.a ##22	ENSGT00390000007753.a	ENSGT00940000162556.A.b.g	ENSGT00390000013727.d.a.b	ENSGT01000000214413.b.a.a.q.a.b.a	ENSGT00940000155212.ab.a.d	ENSGT00390000005717.s	ENSGT00940000164897.a.b.f	ENSGT00940000158265	ENSGT00940000154817.b.b.b.p.a	ENSGT00940000170852	ENSGT00940000154817.b.b.b.p.b	ENSGT00940000159213.q.b.b	ENSGT00940000159862.b.b
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	329																ENSGT00530000063405.a.`b ##22	ENSGT00390000007753.a	ENSGT00940000162556.A.b.g	ENSGT00390000013727.d.a.b	ENSGT01000000214413.b.a.a.q.a.b.a	ENSGT00940000155212.ab.a.d	ENSGT00390000005717.s	ENSGT00940000164897.a.b.f	ENSGT00940000158265	ENSGT00940000154817.b.b.b.p.a	ENSGT00940000170852	ENSGT00940000164855.f	ENSGT00940000154817.b.b.b.p.b	ENSGT00940000159213.q.b.b	ENSGT00940000159862.b.b	ENSGT00940000155984.i.b
Common carp reference	MODERN SPECIES	13	ldb1b (ENSCCRG00000075309)	ENSCCRG00000067968	ENSCCRG00000045296	ENSCCRG00000031895	pfklb (ENSCCRG00000031972)	ENSCCRG00000047598	ENSCCRG00000010733	zgc:171772 (ENSCCRG00000010731)	eif4a3 (ENSCCRG00000021863)	opn6a (ENSCCRG00000075563)	strn (ENSCCRG00000044182)	map1lc3c (ENSCCRG00000066841)	irf2bp2b (ENSCCRG00000072833)	tomm20b (ENSCCRG00000061925)	rbm34 (ENSCCRG00000011466)	tbce (ENSCCRG00000003697) ##22	ENSCCRG00000018986	ENSCCRG00000082110	ENSCCRG00000016221	ENSCCRG00000012752	gnb4b (ENSCCRG00000075304)	ENSCCRG00000062031	clcn4 (ENSCCRG00000069987)	ENSCCRG00000006082	CLASP1 (ENSCCRG00000065112)	ENSCCRG00000075985	INHBB (ENSCCRG00000076349)	ENSCCRG00000070857	ENSCCRG00000068256	ENSCCRG00000056995	ENSCCRG00000073587
Golden-line barbel	MODERN SPECIES	2078															ENSSGRG00000011899	tbce (ENSSGRG00000011902) ##22	ENSSGRG00000011909
Cyprininae_a	ANCESTRAL SPECIES	348	ENSGT01000000219139	ENSGT00390000005639.a.b.d.b.a.a	ENSGT00390000015228	ENSGT00390000018807	ENSGT00940000159292.v.b	ENSGT01100000263476.E.b.a.a.a.a.b.b	ENSGT00390000016988.a.a.a.a.b	ENSGT00940000155037	ENSGT01100000263524.G.f.b	ENSGT00950000183095.a.b.a.b.b.a.a	ENSGT00940000166218.d	ENSGT00940000166218.c.a	ENSGT00940000160591.a.a.b	ENSGT00390000011698.c.a.b.n	ENSGT00390000011249	ENSGT00530000063405.a.ab ##22	ENSGT00940000156318.b.b.m	ENSGT00940000156318.b.b.n	ENSGT00940000153986.b.a.u.b
Golden-line barbel	MODERN SPECIES	957	ENSSGRG00000026809	ENSSGRG00000026805	ENSSGRG00000026802	ENSSGRG00000026797	sgms2b (ENSSGRG00000026795)	sgms2b (ENSSGRG00000026793)	ENSSGRG00000026792	pfklb (ENSSGRG00000026791)	ENSSGRG00000026773	eif4a3 (ENSSGRG00000024684)	strn (ENSSGRG00000024154)	map1lc3c (ENSSGRG00000024128)	irf2bp2b (ENSSGRG00000024127)	tomm20b (ENSSGRG00000024115)	rbm34 (ENSSGRG00000024109)	tbce (ENSSGRG00000024100) ##22	ENSSGRG00000024096	ero1b (ENSSGRG00000024090)
Common carp reference	MODERN SPECIES	42	TMC8 (ENSCCRG00000072909)	ENSCCRG00000073842	syngr2b (ENSCCRG00000036364)	tk1 (ENSCCRG00000047295)	cant1b (ENSCCRG00000015933)	ENSCCRG00000007932	si:dkey-93h22.8 (ENSCCRG00000074641)	ldb1b (ENSCCRG00000001723)	ENSCCRG00000021896	ENSCCRG00000021891	eif4a3 (ENSCCRG00000021882)	strn (ENSCCRG00000063952)	map1lc3c (ENSCCRG00000066718)	irf2bp2b (ENSCCRG00000075369)	tomm20b (ENSCCRG00000024546)	tbce (ENSCCRG00000067190) ##22	ENSCCRG00000002529	ENSCCRG00000069883	ENSCCRG00000063152	ENSCCRG00000065769	ENSCCRG00000067712	ENSCCRG00000064967	ENSCCRG00000056853	ENSCCRG00000079577	ENSCCRG00000065023	ENSCCRG00000078215	ENSCCRG00000074604	ENSCCRG00000076954	ENSCCRG00000082566	ENSCCRG00000075130	ENSCCRG00000061435
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	2									socs7 (ENSCARG00000002142)	mrpl45 (ENSCARG00000002191)	npepps (ENSCARG00000002317)	ENSCARG00000002622	krt95 (ENSCARG00000002631)	ap1s2 (ENSCARG00000002632)	ENSCARG00000002636	tbce (ENSCARG00000002653) ##22	ero1b (ENSCARG00000002847)	ENSCARG00000005268	mfn1b (ENSCARG00000005310)	gnb4b (ENSCARG00000005604)	ENSCARG00000005612	SHROOM2 (ENSCARG00000005613)	ENSCARG00000005619	ENSCARG00000005620	clcn4 (ENSCARG00000005653)	ENSCARG00000006234	ENSCARG00000006376	ENSCARG00000007288	krt93 (ENSCARG00000007290)	zgc:77929 (ENSCARG00000007301)	ENSCARG00000007307 #20
Goldfish	MODERN SPECIES	2	ENSCARG00000054604	INHBB (ENSCARG00000054494)	ralbb (ENSCARG00000054472)	ENSCARG00000054452	ENSCARG00000054438	TMEM63B (ENSCARG00000052816)	SLC29A1 (ENSCARG00000052608)	vipb (ENSCARG00000052593)	sult6b1 (ENSCARG00000052581)	foxg1b (ENSCARG00000052569)	foxg1b (ENSCARG00000052561)	ENSCARG00000052552	irf2bp2b (ENSCARG00000050114)	ENSCARG00000050089	rbm34 (ENSCARG00000049955)	ENSCARG00000049939 ##22	ENSCARG00000017921	SOST (ENSCARG00000017878)	FLNB (ENSCARG00000017814)	slmapa (ENSCARG00000013715)	dennd6aa (ENSCARG00000012644)	ARF5 (ENSCARG00000012605)	ARF5 (ENSCARG00000012591)	ARF5 (ENSCARG00000012584)	ENSCARG00000012577	ENSCARG00000012565	klhl26 (ENSCARG00000012555)	lsm4 (ENSCARG00000012551)	rab3ab (ENSCARG00000012535)	ENSCARG00000012510	gadd45ba (ENSCARG00000012493)
Ciona	ANCESTRAL SPECIES							ENSGT00800000124176	ENSGT00390000009378	ENSGT00390000003024	ENSGT00550000074838	ENSGT00530000063255.A	ENSGT00390000010363	ENSGT00940000157292	ENSGT00660000096865	ENSGT00940000168780	ENSGT00940000164806.H	ENSGT00530000063405.a ##22	ENSGT00950000183191	ENSGT00390000008162	ENSGT00950000183073.a.a.a	ENSGT00550000074792	ENSGT00660000097126	ENSGT00940000166747.b	ENSGT01030000238309	ENSGT00940000168095.a	ENSGT00940000153593	ENSGT00730000113640	ENSGT00390000002374	ENSGT01090000260080.a	ENSGT00390000000455	ENSGT00940000170917	ENSGT00940000155307
Ciona savignyi	MODERN SPECIES	180	ENSCSAVG00000002931	ENSCSAVG00000002921	ENSCSAVG00000002915	ENSCSAVG00000002910	ENSCSAVG00000002880	ENSCSAVG00000002828	ENSCSAVG00000002809	ENSCSAVG00000002805	ENSCSAVG00000002796	ENSCSAVG00000002793	ENSCSAVG00000002787	ENSCSAVG00000002781	ENSCSAVG00000002777	ENSCSAVG00000002766	ENSCSAVG00000002762	ENSCSAVG00000002755 ##22	ENSCSAVG00000002751	ENSCSAVG00000002748	ENSCSAVG00000002745	ENSCSAVG00000002738	ENSCSAVG00000002367	ENSCSAVG00000002735	ENSCSAVG00000002366	ENSCSAVG00000002359	ENSCSAVG00000002355	ENSCSAVG00000002273	ENSCSAVG00000002271	ENSCSAVG00000002268	ENSCSAVG00000002263	ENSCSAVG00000002259	ENSCSAVG00000002257
Ciona intestinalis	MODERN SPECIES	8	ENSCING00000013516	ENSCING00000020805	ENSCING00000005086	ENSCING00000022997	ENSCING00000021194	ENSCING00000005076	erf2 (ENSCING00000005070)	ENSCING00000018386	ENSCING00000013517	ENSCING00000013518	ENSCING00000005067	ENSCING00000022135	ENSCING00000013519	ENSCING00000023635	ENSCING00000018976	ENSCING00000005060 ##22	ENSCING00000013520	ENSCING00000005059	ENSCING00000009968	ENSCING00000019798	ENSCING00000005058	ENSCING00000005048	ENSCING00000005046	ENSCING00000013521	ENSCING00000013522	ENSCING00000013523	zf(mynd)-8 (ENSCING00000023918)	ENSCING00000005028	ENSCING00000020297	ENSCING00000005025	ENSCING00000009967
Yeast	MODERN SPECIES	6	YEL008C-A	MIT1 (YEL007W)	YEA6 (YEL006W)	VAB2 (YEL005C)	YEA4 (YEL004W)	GIM4 (YEL003W)	WBP1 (YEL002C)	IRC22 (YEL001C)	MNN1 (YER001W)	NOP16 (YER002W)	PMI40 (YER003C)	FMP52 (YER004W)	YND1 (YER005W)	NUG1 (YER006W)	YER006C-A	PAC2 (YER007W) #22	TMA20 (YER007C-A)	SEC3 (YER008C)	NTF2 (YER009W)	YER010C	TIR1 (YER011W)	PRE1 (YER012W)	PRP22 (YER013W)	HEM14 (YER014W)	BUD25 (YER014C-A)	FAA2 (YER015W)	BIM1 (YER016W)	AFG3 (YER017C)	SPC25 (YER018C)	ISC1 (YER019W)	SBH2 (YER019C-A)