Eutheria	ANCESTRAL SPECIES	23	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Primates	ANCESTRAL SPECIES	11	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Haplorrhini	ANCESTRAL SPECIES	24	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Simiiformes	ANCESTRAL SPECIES	19	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Macaca_a	ANCESTRAL SPECIES	25	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Rhesus	MODERN SPECIES	12	TRAF7 (ENSMMUG00000019223) #7	RAB26 (ENSMMUG00000002843) #8	PKD1 (ENSMMUG00000029263) #9	TSC2 (ENSMMUG00000002808) #10	NTHL1 (ENSMMUG00000002807) #11	NHERF2 (ENSMMUG00000002806) #12	NPW (ENSMMUG00000020017) #13	ZNF598 (ENSMMUG00000029265) #14	SYNGR3 (ENSMMUG00000007960) #15	GFER (ENSMMUG00000052399) #16	NOXO1 (ENSMMUG00000007953) #17	TBL3 (ENSMMUG00000007943) #18	RNF151 (ENSMMUG00000062548) #19	RPS2 (ENSMMUG00000029267) #20	NDUFB10 (ENSMMUG00000057370) #21	RPL3L (ENSMMUG00000007937) #22	MSRB1 (ENSMMUG00000007936) #23	HS3ST6 (ENSMMUG00000063633) #24	ENSMMUG00000055452 #25	MEIOB (ENSMMUG00000000739) #26	FAHD1 (ENSMMUG00000000738) #27	HAGH (ENSMMUG00000000737) #28	IGFALS (ENSMMUG00000018598) #29	NUBP2 (ENSMMUG00000018597) #30	SPSB3 (ENSMMUG00000060350) #31	EME2 (ENSMMUG00000060835) #32	MRPS34 (ENSMMUG00000018594) #33	NME3 (ENSMMUG00000003857) #34	MAPK8IP3 (ENSMMUG00000017496) #35	JPT2 (ENSMMUG00000000979) #36	ENSMMUG00000059063 #37
Crab-eating macaque	MODERN SPECIES	12	BRICD5 (ENSMFAG00000039405)	MLST8 (ENSMFAG00000045584)	TRAF7 (ENSMFAG00000045280) #7	RAB26 (ENSMFAG00000045162) #8	TSC2 (ENSMFAG00000032166) #10	NTHL1 (ENSMFAG00000032174) #11	NHERF2 (ENSMFAG00000044443) #12	ZNF598 (ENSMFAG00000001763) #14	ENSMFAG00000038081	GFER (ENSMFAG00000039787) #16	NOXO1 (ENSMFAG00000037791) #17	TBL3 (ENSMFAG00000030302) #18	RNF151 (ENSMFAG00000035160) #19	ENSMFAG00000002939 ##20	NDUFB10 (ENSMFAG00000000484) #21	RPL3L (ENSMFAG00000039775) #22	HS3ST6 (ENSMFAG00000054823) #24	ENSMFAG00000054955	ENSMFAG00000000726 #26	FAHD1 (ENSMFAG00000037024) #27	HAGH (ENSMFAG00000004030) #28	IGFALS (ENSMFAG00000042039) #29	SPSB3 (ENSMFAG00000031888) #31	NUBP2 (ENSMFAG00000037059) #30	EME2 (ENSMFAG00000026250) #32	MRPS34 (ENSMFAG00000046146) #33	MAPK8IP3 (ENSMFAG00000037276) #35	ENSMFAG00000060156	JPT2 (ENSMFAG00000033861) #36	CRAMP1 (ENSMFAG00000002985)	TMEM204 (ENSMFAG00000032333)
Pig-tailed macaque	MODERN SPECIES	124	TRAF7 (ENSMNEG00000037325) #7	RAB26 (ENSMNEG00000034256) #8	PKD1 (ENSMNEG00000043046) #9	TSC2 (ENSMNEG00000044090) #10	NTHL1 (ENSMNEG00000039538) #11	NHERF2 (ENSMNEG00000044289) #12	NPW (ENSMNEG00000039297) #13	ZNF598 (ENSMNEG00000042621) #14	ENSMNEG00000038105	GFER (ENSMNEG00000044314) #16	TBL3 (ENSMNEG00000032603) #18	NOXO1 (ENSMNEG00000038172) #17	RNF151 (ENSMNEG00000029972) #19	ENSMNEG00000031742	NDUFB10 (ENSMNEG00000004959) #21	RPL3L (ENSMNEG00000029185) #22	ENSMNEG00000041015 #23	HS3ST6 (ENSMNEG00000040903) #24	ENSMNEG00000004327 #26	FAHD1 (ENSMNEG00000042967) #27	HAGH (ENSMNEG00000044613) #28	IGFALS (ENSMNEG00000032413) #29	NUBP2 (ENSMNEG00000042575) #30	SPSB3 (ENSMNEG00000043847) #31	EME2 (ENSMNEG00000028998) #32	MRPS34 (ENSMNEG00000040928) #33	NME3 (ENSMNEG00000016858) #34	MAPK8IP3 (ENSMNEG00000034470) #35	JPT2 (ENSMNEG00000034006) #36	CRAMP1 (ENSMNEG00000032283)	IFT140 (ENSMNEG00000001208)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Olive baboon	MODERN SPECIES	9	MLST8 (ENSPANG00000018612)	TRAF7 (ENSPANG00000025049) #7	RAB26 (ENSPANG00000022245) #8	TSC2 (ENSPANG00000015710) #10	NTHL1 (ENSPANG00000016971) #11	NHERF2 (ENSPANG00000024976) #12	NPW (ENSPANG00000041068) #13	ZNF598 (ENSPANG00000024974) #14	ENSPANG00000030289	ENSPANG00000046545 #16	NOXO1 (ENSPANG00000000513) #17	TBL3 (ENSPANG00000007024) #18	RNF151 (ENSPANG00000019234) #19	RPS2 (ENSPANG00000021004) #20	NDUFB10 (ENSPANG00000008274) #21	RPL3L (ENSPANG00000011106) #22	ENSPANG00000029688 #23	HS3ST6 (ENSPANG00000007025) #24	ENSPANG00000034551 #26	FAHD1 (ENSPANG00000015411) #27	HAGH (ENSPANG00000000459) #28	IGFALS (ENSPANG00000005022) #29	NUBP2 (ENSPANG00000017597) #30	SPSB3 (ENSPANG00000018349) #31	EME2 (ENSPANG00000015752) #32	MRPS34 (ENSPANG00000020905) #33	NME3 (ENSPANG00000017598) #34	MAPK8IP3 (ENSPANG00000018354) #35	JPT2 (ENSPANG00000016521) #36	CRAMP1 (ENSPANG00000017496)	IFT140 (ENSPANG00000018206)
Cercopithecinae_d	ANCESTRAL SPECIES	65	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.b.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Drill	MODERN SPECIES	1516	CASKIN1 (ENSMLEG00000044209)	TRAF7 (ENSMLEG00000035655) #7	RAB26 (ENSMLEG00000025943) #8	PKD1 (ENSMLEG00000019007) #9	TSC2 (ENSMLEG00000038963) #10	NTHL1 (ENSMLEG00000030400) #11	NHERF2 (ENSMLEG00000032076) #12	ENSMLEG00000036754	ZNF598 (ENSMLEG00000029364) #14	GFER (ENSMLEG00000015681) #16	NOXO1 (ENSMLEG00000031943) #17	TBL3 (ENSMLEG00000043359) #18	ENSMLEG00000030812	ENSMLEG00000038670	NDUFB10 (ENSMLEG00000021536) #21	RPL3L (ENSMLEG00000032414) #22	ENSMLEG00000043698 #23	HS3ST6 (ENSMLEG00000026210) #24	ENSMLEG00000035652 #26	FAHD1 (ENSMLEG00000026819) #27	HAGH (ENSMLEG00000042252) #28	IGFALS (ENSMLEG00000040910) #29	NUBP2 (ENSMLEG00000028983) #30	SPSB3 (ENSMLEG00000032836) #31	EME2 (ENSMLEG00000044276) #32	MRPS34 (ENSMLEG00000028354) #33	ENSMLEG00000038547 #34	MAPK8IP3 (ENSMLEG00000034940) #35	JPT2 (ENSMLEG00000030463) #36	CRAMP1 (ENSMLEG00000040080)	TMEM204 (ENSMLEG00000040932)
Sooty mangabey	MODERN SPECIES	104	CASKIN1 (ENSCATG00000043453)	TRAF7 (ENSCATG00000035820) #7	RAB26 (ENSCATG00000039917) #8	PKD1 (ENSCATG00000032827) #9	TSC2 (ENSCATG00000037504) #10	NTHL1 (ENSCATG00000040433) #11	NHERF2 (ENSCATG00000015633) #12	ENSCATG00000033752 #13	ZNF598 (ENSCATG00000038825) #14	ENSCATG00000034941	TBL3 (ENSCATG00000031298) #18	NOXO1 (ENSCATG00000040569) #17	RNF151 (ENSCATG00000029626) #19	ENSCATG00000040770 ##20	NDUFB10 (ENSCATG00000020227) #21	RPL3L (ENSCATG00000043808) #22	ENSCATG00000045189 #23	HS3ST6 (ENSCATG00000044878) #24	ENSCATG00000013960 #26	FAHD1 (ENSCATG00000024626) #27	HAGH (ENSCATG00000031808) #28	IGFALS (ENSCATG00000038603) #29	NUBP2 (ENSCATG00000032660) #30	SPSB3 (ENSCATG00000014492) #31	EME2 (ENSCATG00000034726) #32	MRPS34 (ENSCATG00000017392) #33	NME3 (ENSCATG00000031446) #34	MAPK8IP3 (ENSCATG00000037988) #35	JPT2 (ENSCATG00000039325) #36	CRAMP1 (ENSCATG00000039680)	IFT140 (ENSCATG00000035856)
Vervet Monkey	MODERN SPECIES	24	RAB26 (ENSCSAG00000010995) #8	PKD1 (ENSCSAG00000011023) #9	TSC2 (ENSCSAG00000011043) #10	NTHL1 (ENSCSAG00000011073) #11	NHERF2 (ENSCSAG00000011087) #12	NPW (ENSCSAG00000011095) #13	ZNF598 (ENSCSAG00000011129) #14	SYNGR3 (ENSCSAG00000011147) #15	GFER (ENSCSAG00000011153) #16	ENSCSAG00000018843	NOXO1 (ENSCSAG00000011176) #17	TBL3 (ENSCSAG00000011191) #18	RNF151 (ENSCSAG00000011197) #19	RPS2 (ENSCSAG00000011216) #20	NDUFB10 (ENSCSAG00000011226) #21	RPL3L (ENSCSAG00000011232) #22	HS3ST6 (ENSCSAG00000011240) #24	ENSCSAG00000011268 #26	FAHD1 (ENSCSAG00000018842) #27	HAGH (ENSCSAG00000011337) #28	IGFALS (ENSCSAG00000011362) #29	NUBP2 (ENSCSAG00000011369) #30	SPSB3 (ENSCSAG00000011396) #31	EME2 (ENSCSAG00000011426) #32	MRPS34 (ENSCSAG00000011443) #33	NME3 (ENSCSAG00000011458) #34	MAPK8IP3 (ENSCSAG00000011484) #35	JPT2 (ENSCSAG00000011502) #36	CRAMP1 (ENSCSAG00000011519)	TMEM204 (ENSCSAG00000011531)	IFT140 (ENSCSAG00000011558)
Rhinopithecus	ANCESTRAL SPECIES	14	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Golden snub-nosed monkey	MODERN SPECIES	2643	TRAF7 (ENSRROG00000040970) #7	RAB26 (ENSRROG00000036356) #8	PKD1 (ENSRROG00000034084) #9	TSC2 (ENSRROG00000043138) #10	NTHL1 (ENSRROG00000038095) #11	NHERF2 (ENSRROG00000040635) #12	ENSRROG00000016296 #13	ZNF598 (ENSRROG00000025953) #14	SYNGR3 (ENSRROG00000013898) #15	GFER (ENSRROG00000039639) #16	NOXO1 (ENSRROG00000031198) #17	TBL3 (ENSRROG00000026697) #18	RNF151 (ENSRROG00000035586) #19	RPS2 (ENSRROG00000035267) #20	NDUFB10 (ENSRROG00000005315) #21	RPL3L (ENSRROG00000033620) #22	MSRB1 (ENSRROG00000017890) #23	HS3ST6 (ENSRROG00000045261) #24	ENSRROG00000023184 #26	FAHD1 (ENSRROG00000033003) #27	HAGH (ENSRROG00000032851) #28	IGFALS (ENSRROG00000042451) #29	NUBP2 (ENSRROG00000045209) #30	SPSB3 (ENSRROG00000044609) #31	EME2 (ENSRROG00000043980) #32	MRPS34 (ENSRROG00000028689) #33	ENSRROG00000035949 #34	MAPK8IP3 (ENSRROG00000045499) #35	JPT2 (ENSRROG00000025417) #36	CRAMP1 (ENSRROG00000043453)	TMEM204 (ENSRROG00000043665)
Black snub-nosed monkey	MODERN SPECIES	1929	TRAF7 (ENSRBIG00000028226) #7	RAB26 (ENSRBIG00000035237) #8	PKD1 (ENSRBIG00000014415) #9	TSC2 (ENSRBIG00000039722) #10	NTHL1 (ENSRBIG00000042577) #11	NHERF2 (ENSRBIG00000032177) #12	ENSRBIG00000028093 #13	ZNF598 (ENSRBIG00000020769) #14	SYNGR3 (ENSRBIG00000042440) #15	GFER (ENSRBIG00000035198) #16	NOXO1 (ENSRBIG00000043548) #17	TBL3 (ENSRBIG00000032982) #18	RNF151 (ENSRBIG00000030571) #19	RPS2 (ENSRBIG00000036242) #20	NDUFB10 (ENSRBIG00000044605) #21	RPL3L (ENSRBIG00000028920) #22	ENSRBIG00000044576 #23	HS3ST6 (ENSRBIG00000044265) #24	ENSRBIG00000030178 #26	HAGH (ENSRBIG00000034228) #28	IGFALS (ENSRBIG00000037270) #29	NUBP2 (ENSRBIG00000031416) #30	SPSB3 (ENSRBIG00000039428) #31	EME2 (ENSRBIG00000032429) #32	MRPS34 (ENSRBIG00000030707) #33	NME3 (ENSRBIG00000031631) #34	MAPK8IP3 (ENSRBIG00000044410) #35	JPT2 (ENSRBIG00000041459) #36	CRAMP1 (ENSRBIG00000031863)	TMEM204 (ENSRBIG00000033674)	IFT140 (ENSRBIG00000040322)
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452.m #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.b.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452.m #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	24	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452.m #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Homo/Pan group	ANCESTRAL SPECIES	23	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452.m #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Pan	ANCESTRAL SPECIES	28	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452.m #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Bonobo	MODERN SPECIES	7	MLST8 (ENSPPAG00000033345)	ENSPPAG00000028011	TRAF7 (ENSPPAG00000035191) #7	ENSPPAG00000042887 #8	TSC2 (ENSPPAG00000033353) #10	NTHL1 (ENSPPAG00000003626) #11	NHERF2 (ENSPPAG00000029803) #12	ZNF598 (ENSPPAG00000043798) #14	ENSPPAG00000040928	GFER (ENSPPAG00000019230) #16	ENSPPAG00000030899 #17	TBL3 (ENSPPAG00000041939) #18	RNF151 (ENSPPAG00000035993) #19	ENSPPAG00000028366 ##20	NDUFB10 (ENSPPAG00000040038) #21	RPL3L (ENSPPAG00000039317) #22	ENSPPAG00000031640 #23	HS3ST6 (ENSPPAG00000029952) #24	ENSPPAG00000032337 #26	IGFALS (ENSPPAG00000025910) #29	ENSPPAG00000029613 #30	SPSB3 (ENSPPAG00000023101) #31	EME2 (ENSPPAG00000035754) #32	MRPS34 (ENSPPAG00000033749) #33	NME3 (ENSPPAG00000030073) #34	MAPK8IP3 (ENSPPAG00000034790) #35	JPT2 (ENSPPAG00000034952) #36	CRAMP1 (ENSPPAG00000036103)	TMEM204 (ENSPPAG00000033773)	IFT140 (ENSPPAG00000041233)	TELO2 (ENSPPAG00000031847)
Chimpanzee	MODERN SPECIES	7	TRAF7 (ENSPTRG00000007635) #7	RAB26 (ENSPTRG00000007634) #8	ENSPTRG00000050693 #9	TSC2 (ENSPTRG00000031311) #10	NTHL1 (ENSPTRG00000007628) #11	NHERF2 (ENSPTRG00000007627) #12	NPW (ENSPTRG00000007626) #13	ZNF598 (ENSPTRG00000007625) #14	SYNGR3 (ENSPTRG00000007624)	GFER (ENSPTRG00000045515) #16	NOXO1 (ENSPTRG00000023021) #17	TBL3 (ENSPTRG00000007621) #18	RNF151 (ENSPTRG00000007620) #19	ENSPTRG00000052871 ##20	NDUFB10 (ENSPTRG00000007618) #21	RPL3L (ENSPTRG00000007617) #22	MSRB1 (ENSPTRG00000024355) #23	MEIOB (ENSPTRG00000007612) #26	FAHD1 (ENSPTRG00000046890) #27	HAGH (ENSPTRG00000007611) #28	IGFALS (ENSPTRG00000007610) #29	NUBP2 (ENSPTRG00000007609) #30	SPSB3 (ENSPTRG00000007608) #31	EME2 (ENSPTRG00000007607) #32	MRPS34 (ENSPTRG00000007606) #33	NME3 (ENSPTRG00000007605) #34	MAPK8IP3 (ENSPTRG00000007603) #35	JPT2 (ENSPTRG00000034459) #36	CRAMP1 (ENSPTRG00000007602)	TMEM204 (ENSPTRG00000031314)	IFT140 (ENSPTRG00000007600)
Human	MODERN SPECIES	7	TRAF7 (ENSG00000131653) #7	RAB26 (ENSG00000167964) #8	PKD1 (ENSG00000008710) #9	TSC2 (ENSG00000103197) #10	NTHL1 (ENSG00000065057) #11	NHERF2 (ENSG00000065054) #12	NPW (ENSG00000183971) #13	ZNF598 (ENSG00000167962) #14	SYNGR3 (ENSG00000127561) #15	GFER (ENSG00000127554) #16	NOXO1 (ENSG00000196408) #17	TBL3 (ENSG00000183751) #18	RNF151 (ENSG00000179580) #19	RPS2 (ENSG00000140988) #20	NDUFB10 (ENSG00000140990) #21	RPL3L (ENSG00000140986) #22	MSRB1 (ENSG00000198736) #23	HS3ST6 (ENSG00000162040) #24	ENSG00000289722 #26	MEIOB (ENSG00000162039) #26	FAHD1 (ENSG00000180185) #27	HAGH (ENSG00000063854) #28	IGFALS (ENSG00000099769) #29	NUBP2 (ENSG00000095906) #30	SPSB3 (ENSG00000162032) #31	EME2 (ENSG00000197774) #32	MRPS34 (ENSG00000074071) #33	NME3 (ENSG00000103024) #34	MAPK8IP3 (ENSG00000138834) #35	JPT2 (ENSG00000206053) #36	CRAMP1 (ENSG00000007545)
Gorilla	MODERN SPECIES	7	TRAF7 (ENSGGOG00000022099) #7	RAB26 (ENSGGOG00000027074) #8	PKD1 (ENSGGOG00000007016) #9	ENSGGOG00000043551 #10	ENSGGOG00000027370 #10	NTHL1 (ENSGGOG00000023097) #11	ENSGGOG00000005919 #12	ENSGGOG00000008575	ZNF598 (ENSGGOG00000025660) #14	ENSGGOG00000007034 #15	GFER (ENSGGOG00000006835) #16	ENSGGOG00000009392 #17	TBL3 (ENSGGOG00000009378) #18	RPS2 (ENSGGOG00000009371) ##20	NDUFB10 (ENSGGOG00000009367) #21	RPL3L (ENSGGOG00000009364) #22	ENSGGOG00000022794 #23	HS3ST6 (ENSGGOG00000009361) #24	ENSGGOG00000012261 #26	FAHD1 (ENSGGOG00000024697) #27	HAGH (ENSGGOG00000012252) #28	IGFALS (ENSGGOG00000006268) #29	NUBP2 (ENSGGOG00000006254) #30	SPSB3 (ENSGGOG00000006245) #31	EME2 (ENSGGOG00000006238) #32	MRPS34 (ENSGGOG00000006234) #33	NME3 (ENSGGOG00000006229) #34	MAPK8IP3 (ENSGGOG00000006208) #35	JPT2 (ENSGGOG00000006200) #36	CRAMP1 (ENSGGOG00000006181)	TMEM204 (ENSGGOG00000005903)
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	7	NTHL1 (ENSPPYG00000006985) #11	NHERF2 (ENSPPYG00000006984) #12	NPW (ENSPPYG00000006983) #13	ENSPPYG00000006981	GFER (ENSPPYG00000006980) #16	ENSPPYG00000006978 #17	ZNF598 (ENSPPYG00000006982) #14	RNF151 (ENSPPYG00000036334) #19	ENSPPYG00000006975 ##20	ENSPPYG00000031680 #21	ENSPPYG00000006973 #22	ENSPPYG00000006972 #23	TBL3 (ENSPPYG00000006977) #18	ENSPPYG00000030067	NDUFB10 (ENSPPYG00000006974) #21	ENSPPYG00000029764 #22	MSRB1 (ENSPPYG00000041142) #23	HS3ST6 (ENSPPYG00000006971) #24	ENSPPYG00000006968 #26	FAHD1 (ENSPPYG00000037970) #27	HAGH (ENSPPYG00000006966) #28	IGFALS (ENSPPYG00000006965) #29	ENSPPYG00000006964 #30	SPSB3 (ENSPPYG00000006963) #31	EME2 (ENSPPYG00000035411) #32	MRPS34 (ENSPPYG00000006962) #33	NME3 (ENSPPYG00000032952) #34	MAPK8IP3 (ENSPPYG00000006960) #35	JPT2 (ENSPPYG00000006959) #36	CRAMP1 (ENSPPYG00000006958)	TMEM204 (ENSPPYG00000006957)
Orangutan	MODERN SPECIES	7	CASKIN1 (ENSPPYG00000006990)	TRAF7 (ENSPPYG00000006989) #7	RAB26 (ENSPPYG00000006988) #8	PKD1 (ENSPPYG00000006987) #9	TSC2 (ENSPPYG00000006986) #10	NTHL1 (ENSPPYG00000006985) #11	NHERF2 (ENSPPYG00000006984) #12	NPW (ENSPPYG00000006983) #13	ENSPPYG00000006981	GFER (ENSPPYG00000006980) #16	ENSPPYG00000006978 #17	ZNF598 (ENSPPYG00000006982) #14	RNF151 (ENSPPYG00000036334) #19	ENSPPYG00000006975 ##20	ENSPPYG00000031680 #21	ENSPPYG00000006973 #22	ENSPPYG00000006972 #23	TBL3 (ENSPPYG00000006977) #18	ENSPPYG00000030067	NDUFB10 (ENSPPYG00000006974) #21	ENSPPYG00000029764 #22	MSRB1 (ENSPPYG00000041142) #23	HS3ST6 (ENSPPYG00000006971) #24	ENSPPYG00000006968 #26	FAHD1 (ENSPPYG00000037970) #27	HAGH (ENSPPYG00000006966) #28	IGFALS (ENSPPYG00000006965) #29	ENSPPYG00000006964 #30	SPSB3 (ENSPPYG00000006963) #31	EME2 (ENSPPYG00000035411) #32	MRPS34 (ENSPPYG00000006962) #33
Gibbon	MODERN SPECIES	8	MLST8 (ENSNLEG00000009208)	CASKIN1 (ENSNLEG00000009201)	TRAF7 (ENSNLEG00000009168) #7	RAB26 (ENSNLEG00000009155) #8	ENSNLEG00000027970 #9	TSC2 (ENSNLEG00000009038) #10	NTHL1 (ENSNLEG00000009019) #11	ENSNLEG00000009011 #12	ZNF598 (ENSNLEG00000008983) #14	GFER (ENSNLEG00000008975) #16	NOXO1 (ENSNLEG00000008947) #17	TBL3 (ENSNLEG00000008889) #18	RNF151 (ENSNLEG00000008887) #19	RPS2 (ENSNLEG00000008877) #20	NDUFB10 (ENSNLEG00000008867) #21	RPL3L (ENSNLEG00000008850) #22	ENSNLEG00000008834 #23	ENSNLEG00000008811 #26	FAHD1 (ENSNLEG00000008809) #27	ENSNLEG00000008791 #28	ENSNLEG00000030061	NUBP2 (ENSNLEG00000008782) #30	SPSB3 (ENSNLEG00000031220) #31	EME2 (ENSNLEG00000008769) #32	MRPS34 (ENSNLEG00000008766) #33	NME3 (ENSNLEG00000008754) #34	MAPK8IP3 (ENSNLEG00000026706) #35	ENSNLEG00000029033	CRAMP1 (ENSNLEG00000008491)	IFT140 (ENSNLEG00000008705)	TMEM204 (ENSNLEG00000008742)
Platyrrhini	ANCESTRAL SPECIES	32	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00970000197210	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427
Cebidae	ANCESTRAL SPECIES	16	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00970000197210	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427
Marmoset	MODERN SPECIES	3	MLST8 (ENSCJAG00000015030)	CASKIN1 (ENSCJAG00000015039)	TRAF7 (ENSCJAG00000015047) #7	RAB26 (ENSCJAG00000015059) #8	NTHL1 (ENSCJAG00000015178) #11	NHERF2 (ENSCJAG00000015182) #12	NPW (ENSCJAG00000039358) #13	ZNF598 (ENSCJAG00000015194) #14	ENSCJAG00000039827	GFER (ENSCJAG00000045500) #16	NOXO1 (ENSCJAG00000015221) #17	TBL3 (ENSCJAG00000015245) #18	RNF151 (ENSCJAG00000015265) #19	ENSCJAG00000015267 ##20	NDUFB10 (ENSCJAG00000047303) #21	RPL3L (ENSCJAG00000031300) #22	MSRB1 (ENSCJAG00000046785) #23	HS3ST6 (ENSCJAG00000038529) #24	PRSS22 (ENSCJAG00000034598)	ENSCJAG00000015315	ENSCJAG00000038414	PRSS21 (ENSCJAG00000044190)	ENSCJAG00000015323	PRSS33 (ENSCJAG00000015343)	ELOB (ENSCJAG00000015347)	SRRM2 (ENSCJAG00000015354)	ENSCJAG00000070318	FLYWCH2 (ENSCJAG00000047776)	FLYWCH1 (ENSCJAG00000081999)	ENSCJAG00000015380	KREMEN2 (ENSCJAG00000015398)
Cebidae_a	ANCESTRAL SPECIES	15	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00910000146999	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000164567.h	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427	ENSGT00730000111940
Capuchin	MODERN SPECIES	444	TRAF7 (ENSCCAG00000032534) #7	RAB26 (ENSCCAG00000033082) #8	PKD1 (ENSCCAG00000038035) #9	TSC2 (ENSCCAG00000036456) #10	NTHL1 (ENSCCAG00000022274) #11	SLC9A3R2 (ENSCCAG00000033482) #12	NPW (ENSCCAG00000030311) #13	ZNF598 (ENSCCAG00000018310) #14	ENSCCAG00000028959	GFER (ENSCCAG00000012276) #16	TBL3 (ENSCCAG00000034486) #18	NOXO1 (ENSCCAG00000012794) #17	RNF151 (ENSCCAG00000026159) #19	ENSCCAG00000026811	NDUFB10 (ENSCCAG00000024399) #21	RPL3L (ENSCCAG00000028194) #22	ENSCCAG00000037720 #23	HS3ST6 (ENSCCAG00000005829) #24	PRSS22 (ENSCCAG00000023671)	ZG16B (ENSCCAG00000011182)	PRSS21 (ENSCCAG00000029304)	PRSS41 (ENSCCAG00000022189)	PRSS33 (ENSCCAG00000033310)	ELOB (ENSCCAG00000008353)	SRRM2 (ENSCCAG00000031601)	FLYWCH2 (ENSCCAG00000025623)	FLYWCH1 (ENSCCAG00000017112)	KREMEN2 (ENSCCAG00000023928)	PKMYT1 (ENSCCAG00000036161)	PAQR4 (ENSCCAG00000007894)	CLDN9 (ENSCCAG00000001076)
Bolivian squirrel monkey	MODERN SPECIES	71	TRAF7 (ENSSBOG00000007977) #7	RAB26 (ENSSBOG00000004636) #8	PKD1 (ENSSBOG00000027670) #9	TSC2 (ENSSBOG00000003087) #10	NTHL1 (ENSSBOG00000025341) #11	NHERF2 (ENSSBOG00000028364) #12	NPW (ENSSBOG00000034700) #13	ZNF598 (ENSSBOG00000028788) #14	ENSSBOG00000030962	GFER (ENSSBOG00000034588) #16	NOXO1 (ENSSBOG00000031376) #17	TBL3 (ENSSBOG00000013923) #18	RNF151 (ENSSBOG00000018174) #19	ENSSBOG00000025337	NDUFB10 (ENSSBOG00000031198) #21	RPL3L (ENSSBOG00000026845) #22	MSRB1 (ENSSBOG00000029381) #23	PRSS22 (ENSSBOG00000034101)	ZG16B (ENSSBOG00000026570)	PRSS21 (ENSSBOG00000004112)	PRSS41 (ENSSBOG00000015646)	PRSS33 (ENSSBOG00000020955)	ENSSBOG00000022693	SRRM2 (ENSSBOG00000024771)	ENSSBOG00000024588	FLYWCH2 (ENSSBOG00000033478)	FLYWCH1 (ENSSBOG00000024241)	KREMEN2 (ENSSBOG00000022317)	PKMYT1 (ENSSBOG00000022064)	PAQR4 (ENSSBOG00000031731)	GREP1 (ENSSBOG00000005560)
Mas night monkey	MODERN SPECIES	1162	RAB26 (ENSANAG00000027265) #8	ENSANAG00000019882	PKD1 (ENSANAG00000024591) #9	TSC2 (ENSANAG00000023148) #10	NTHL1 (ENSANAG00000033224) #11	NHERF2 (ENSANAG00000030277) #12	NPW (ENSANAG00000026821) #13	ZNF598 (ENSANAG00000026209) #14	ENSANAG00000034896	GFER (ENSANAG00000034502) #16	NOXO1 (ENSANAG00000034027) #17	TBL3 (ENSANAG00000030472) #18	RNF151 (ENSANAG00000026490) #19	ENSANAG00000022295 #20	NDUFB10 (ENSANAG00000020686) #21	RPL3L (ENSANAG00000019116) #22	MSRB1 (ENSANAG00000036834) #23	HS3ST6 (ENSANAG00000019609) #24	PRSS22 (ENSANAG00000022238)	ENSANAG00000021677	PRSS21 (ENSANAG00000021600)	ENSANAG00000021499	PRSS33 (ENSANAG00000021133)	ELOB (ENSANAG00000017599)	SRRM2 (ENSANAG00000034911)	FLYWCH2 (ENSANAG00000034418)	FLYWCH1 (ENSANAG00000033837)	KREMEN2 (ENSANAG00000032213)	PAQR4 (ENSANAG00000031007)	PKMYT1 (ENSANAG00000029282)	ENSANAG00000028176
Tarsier	MODERN SPECIES	1902						TSC2 (ENSTSYG00000025779) #10	NTHL1 (ENSTSYG00000035337) #11	SLC9A3R2 (ENSTSYG00000027539) #12	ZNF598 (ENSTSYG00000032996) #14	GFER (ENSTSYG00000029430) #16	NOXO1 (ENSTSYG00000028783) #17	TBL3 (ENSTSYG00000036142) #18	RNF151 (ENSTSYG00000001876) #19	RPS2 (ENSTSYG00000013466) ##20	NDUFB10 (ENSTSYG00000013475) #21	RPL3L (ENSTSYG00000036590) #22
Strepsirrhini	ANCESTRAL SPECIES	24	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Bushbaby	MODERN SPECIES	159	MLST8 (ENSOGAG00000033928)	CASKIN1 (ENSOGAG00000034517)	TRAF7 (ENSOGAG00000006581) #7	RAB26 (ENSOGAG00000033648) #8	PKD1 (ENSOGAG00000016616) #9	TSC2 (ENSOGAG00000016605) #10	NTHL1 (ENSOGAG00000016602) #11	NHERF2 (ENSOGAG00000027256) #12	ZNF598 (ENSOGAG00000008022) #14	SYNGR3 (ENSOGAG00000028210) #15	GFER (ENSOGAG00000016907) #16	NOXO1 (ENSOGAG00000010110) #17	TBL3 (ENSOGAG00000010104) #18	RPS2 (ENSOGAG00000010098) #20	NDUFB10 (ENSOGAG00000010094) #21	RPL3L (ENSOGAG00000010087) #22	HS3ST6 (ENSOGAG00000010083) #24	FAHD1 (ENSOGAG00000012662) #27	HAGH (ENSOGAG00000012660) #28	IGFALS (ENSOGAG00000012659) #29	NUBP2 (ENSOGAG00000012655) #30	SPSB3 (ENSOGAG00000027372) #31	EME2 (ENSOGAG00000012649) #32	MRPS34 (ENSOGAG00000012647) #33	NME3 (ENSOGAG00000026071) #34	MAPK8IP3 (ENSOGAG00000012639) #35	CRAMP1 (ENSOGAG00000001253)	TMEM204 (ENSOGAG00000001249)	JPT2 (ENSOGAG00000012638) #36	IFT140 (ENSOGAG00000001245)	TELO2 (ENSOGAG00000004371)
Lemuriformes	ANCESTRAL SPECIES	27	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Mouse lemur	MODERN SPECIES	8	TRAF7 (ENSMICG00000005860) #7	RAB26 (ENSMICG00000027380) #8	PKD1 (ENSMICG00000005834) #9	TSC2 (ENSMICG00000005800) #10	NTHL1 (ENSMICG00000035043) #11	NHERF2 (ENSMICG00000015931) #12	NPW (ENSMICG00000034106) #13	ZNF598 (ENSMICG00000012834) #14	SYNGR3 (ENSMICG00000031975) #15	GFER (ENSMICG00000027083) #16	NOXO1 (ENSMICG00000012809) #17	TBL3 (ENSMICG00000012787) #18	RNF151 (ENSMICG00000012775) #19	ENSMICG00000012765 ##20	NDUFB10 (ENSMICG00000027466) #21	RPL3L (ENSMICG00000012746) #22	MSRB1 (ENSMICG00000011349) #23	HS3ST6 (ENSMICG00000011342) #24	ENSMICG00000037918	ENSMICG00000011322 #26	FAHD1 (ENSMICG00000002137) #27	HAGH (ENSMICG00000002132) #28	IGFALS (ENSMICG00000002129) #29	NUBP2 (ENSMICG00000002126) #30	SPSB3 (ENSMICG00000002122) #31	MRPS34 (ENSMICG00000031095) #33	NME3 (ENSMICG00000030545) #34	MAPK8IP3 (ENSMICG00000002091) #35	JPT2 (ENSMICG00000026714) #36	CRAMP1 (ENSMICG00000014094)	TMEM204 (ENSMICG00000042845)
Lemuriformes_a	ANCESTRAL SPECIES	23	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652.i #36	ENSGT00390000003337	ENSGT00390000015528
Coquerels sifaka	MODERN SPECIES	384	TRAF7 (ENSPCOG00000013195) #7	RAB26 (ENSPCOG00000013209) #8	PKD1 (ENSPCOG00000010798) #9	TSC2 (ENSPCOG00000019871) #10	NTHL1 (ENSPCOG00000019236) #11	NHERF2 (ENSPCOG00000004586) #12	NPW (ENSPCOG00000010961) #13	ZNF598 (ENSPCOG00000021012) #14	SYNGR3 (ENSPCOG00000021755) #15	GFER (ENSPCOG00000014504) #16	NOXO1 (ENSPCOG00000025960) #17	TBL3 (ENSPCOG00000019749) #18	RNF151 (ENSPCOG00000015191) #19	ENSPCOG00000028664 ##20	NDUFB10 (ENSPCOG00000022126) #21	RPL3L (ENSPCOG00000014695) #22	MSRB1 (ENSPCOG00000027095) #23	HS3ST6 (ENSPCOG00000027953) #24	ENSPCOG00000002540 #26	FAHD1 (ENSPCOG00000007621) #27	HAGH (ENSPCOG00000026794) #28	IGFALS (ENSPCOG00000012687) #29	NUBP2 (ENSPCOG00000018600) #30	SPSB3 (ENSPCOG00000015385) #31	EME2 (ENSPCOG00000021099) #32	MRPS34 (ENSPCOG00000026798) #33	NME3 (ENSPCOG00000019193) #34	MAPK8IP3 (ENSPCOG00000021523) #35	ENSPCOG00000028105 #36	CRAMP1 (ENSPCOG00000004847)	TMEM204 (ENSPCOG00000027514)
Greater bamboo lemur	MODERN SPECIES	390	CASKIN1 (ENSPSMG00000022966)	TRAF7 (ENSPSMG00000023025) #7	RAB26 (ENSPSMG00000023082) #8	TSC2 (ENSPSMG00000023695) #10	NTHL1 (ENSPSMG00000024110) #11	NHERF2 (ENSPSMG00000024127) #12	NPW (ENSPSMG00000024133) #13	ZNF598 (ENSPSMG00000024145) #14	SYNGR3 (ENSPSMG00000024155) #15	GFER (ENSPSMG00000024165) #16	NOXO1 (ENSPSMG00000024168) #17	ENSPSMG00000024173	ENSPSMG00000024178 #19	RPS2 (ENSPSMG00000024201) ##20	NDUFB10 (ENSPSMG00000024222) #21	RPL3L (ENSPSMG00000024237) #22	MSRB1 (ENSPSMG00000024244) #23	HS3ST6 (ENSPSMG00000024249) #24	ENSPSMG00000024257 ##37	ENSPSMG00000024276 #26	FAHD1 (ENSPSMG00000024285) #27	HAGH (ENSPSMG00000024311) #28	ENSPSMG00000024318	IGFALS (ENSPSMG00000024321) #29	NUBP2 (ENSPSMG00000024328) #30	SPSB3 (ENSPSMG00000024361) #31	EME2 (ENSPSMG00000024369) #32	MRPS34 (ENSPSMG00000024379) #33	NME3 (ENSPSMG00000024387) #34	MAPK8IP3 (ENSPSMG00000024595) #35	JPT2 (ENSPSMG00000024685) #36
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Glires	ANCESTRAL SPECIES	11	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Lagomorpha	ANCESTRAL SPECIES	313																ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30
Pika	MODERN SPECIES	1702																RPL3L (ENSOPRG00000007029) #22
Rabbit	MODERN SPECIES	987																RPL3L (ENSOCUG00000016283) #22	MSRB1 (ENSOCUG00000022831) #23	HS3ST6 (ENSOCUG00000039128) #24	ENSOCUG00000005997 #26	ENSOCUG00000024657 #28
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Marmotini	ANCESTRAL SPECIES	3	ENSGT00940000157022.h #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Alpin marmot	MODERN SPECIES	28	MLST8 (ENSMMMG00000009615)	TRAF7 (ENSMMMG00000009664) #7	RAB26 (ENSMMMG00000009776) #8	ENSMMMG00000009812 #9	TSC2 (ENSMMMG00000009837) #10	NTHL1 (ENSMMMG00000010821) #11	NHERF2 (ENSMMMG00000010827) #12	ENSMMMG00000010835	ZNF598 (ENSMMMG00000010846) #14	SYNGR3 (ENSMMMG00000010863) #15	GFER (ENSMMMG00000010878) #16	NOXO1 (ENSMMMG00000010886) #17	RNF151 (ENSMMMG00000010935) #19	RPS2 (ENSMMMG00000010948) ##20	NDUFB10 (ENSMMMG00000010988) #21	RPL3L (ENSMMMG00000011010) #22	MSRB1 (ENSMMMG00000011047) #23	HS3ST6 (ENSMMMG00000011071) #24	ENSMMMG00000011082 #26	FAHD1 (ENSMMMG00000011106) #27	HAGH (ENSMMMG00000011110) #28	IGFALS (ENSMMMG00000011124) #29	NUBP2 (ENSMMMG00000011128) #30	SPSB3 (ENSMMMG00000011143) #31	EME2 (ENSMMMG00000011151) #32	MRPS34 (ENSMMMG00000011168) #33	MAPK8IP3 (ENSMMMG00000011208) #35	JPT2 (ENSMMMG00000015507) #36	CRAMP1 (ENSMMMG00000015511)	IFT140 (ENSMMMG00000015580)	TMEM204 (ENSMMMG00000015619)
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT00940000157022.h #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Squirrel	MODERN SPECIES	294	ENSSTOG00000013083 #7	RAB26 (ENSSTOG00000013081) #8	PKD1 (ENSSTOG00000013048) #9	TSC2 (ENSSTOG00000013014) #10	NTHL1 (ENSSTOG00000013011) #11	NHERF2 (ENSSTOG00000013004) #12	ENSSTOG00000022004 #13	ZNF598 (ENSSTOG00000012994) #14	SYNGR3 (ENSSTOG00000012987) #15	GFER (ENSSTOG00000023807) #16	NOXO1 (ENSSTOG00000023430) #17	TBL3 (ENSSTOG00000012964) #18	ENSSTOG00000023350 #19	ENSSTOG00000012944 ##20	NDUFB10 (ENSSTOG00000012938) #21	RPL3L (ENSSTOG00000012921) #22	MSRB1 (ENSSTOG00000034478) #23	HS3ST6 (ENSSTOG00000012919) #24	ENSSTOG00000020433 #26	HAGH (ENSSTOG00000009109) #28	IGFALS (ENSSTOG00000027057) #29	NUBP2 (ENSSTOG00000026670) #30	SPSB3 (ENSSTOG00000021171) #31	EME2 (ENSSTOG00000000961) #32	MRPS34 (ENSSTOG00000021586) #33	NME3 (ENSSTOG00000028986) #34	MAPK8IP3 (ENSSTOG00000003734) #35	JPT2 (ENSSTOG00000003729) #36	ENSSTOG00000025346	CRAMP1 (ENSSTOG00000003675)	IFT140 (ENSSTOG00000003636)
Arctic ground squirrel	MODERN SPECIES	37	ENSUPAG00010017594 #7	RAB26 (ENSUPAG00010017565) #8	ENSUPAG00010017562	TSC2 (ENSUPAG00010017065) #10	NTHL1 (ENSUPAG00010017055) #11	NHERF2 (ENSUPAG00010017024) #12	ENSUPAG00010017018 #13	ZNF598 (ENSUPAG00010016990) #14	SYNGR3 (ENSUPAG00010016982) #15	GFER (ENSUPAG00010016968) #16	NOXO1 (ENSUPAG00010016951) #17	TBL3 (ENSUPAG00010016941) #18	RNF151 (ENSUPAG00010016927) #19	RPS2 (ENSUPAG00010016573) ##20	NDUFB10 (ENSUPAG00010016562) #21	RPL3L (ENSUPAG00010016544) #22	MSRB1 (ENSUPAG00010016532) #23	HS3ST6 (ENSUPAG00010016522) #24	ENSUPAG00010016481 #26	FAHD1 (ENSUPAG00010016476) #27	HAGH (ENSUPAG00010016451) #28	ENSUPAG00010016447 #29	NUBP2 (ENSUPAG00010016409) #30	SPSB3 (ENSUPAG00010016383) #31	EME2 (ENSUPAG00010016365) #32	ENSUPAG00010016348 #33	NME3 (ENSUPAG00010016324) #34	MAPK8IP3 (ENSUPAG00010015185) #35	JPT2 (ENSUPAG00010015162) #36	CRAMP1 (ENSUPAG00010015084)	TMEM204 (ENSUPAG00010015069)
Eurasian red squirrel	MODERN SPECIES	9	MLST8 (ENSSVLG00005023671)	CASKIN1 (ENSSVLG00005023622)	ENSSVLG00005023558 #7	RAB26 (ENSSVLG00005023508) #8	TSC2 (ENSSVLG00005020810) #10	NTHL1 (ENSSVLG00005020622) #11	NHERF2 (ENSSVLG00005020506) #12	ENSSVLG00005020465 #13	ZNF598 (ENSSVLG00005020435) #14	SYNGR3 (ENSSVLG00005020383) #15	GFER (ENSSVLG00005020336) #16	NOXO1 (ENSSVLG00005020093) #17	RNF151 (ENSSVLG00005019772) #19	ENSSVLG00005019653 ##20	NDUFB10 (ENSSVLG00005019544) #21	RPL3L (ENSSVLG00005019463) #22	MSRB1 (ENSSVLG00005019321) #23	HS3ST6 (ENSSVLG00005019256) #24	ENSSVLG00005019191 #26	ENSSVLG00005019134 #27	HAGH (ENSSVLG00005018908) #28	IGFALS (ENSSVLG00005018848) #29	NUBP2 (ENSSVLG00005018731) #30	EME2 (ENSSVLG00005018557) #32	MRPS34 (ENSSVLG00005018518) #33	NME3 (ENSSVLG00005018434) #34	MAPK8IP3 (ENSSVLG00005018319) #35	JPT2 (ENSSVLG00005018232) #36	CRAMP1 (ENSSVLG00005018001)	TMEM204 (ENSSVLG00005017964)	IFT140 (ENSSVLG00005017909)
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348.m #21	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Guinea pig	MODERN SPECIES	4	CASKIN1 (ENSCPOG00000011848)	TRAF7 (ENSCPOG00000011840) #7	RAB26 (ENSCPOG00000025075) #8	PKD1 (ENSCPOG00000003228) #9	TSC2 (ENSCPOG00000003217) #10	NTHL1 (ENSCPOG00000003211) #11	NHERF2 (ENSCPOG00000026861) #12	ZNF598 (ENSCPOG00000004958) #14	SYNGR3 (ENSCPOG00000035707) #15	GFER (ENSCPOG00000011642) #16	NOXO1 (ENSCPOG00000019858) #17	TBL3 (ENSCPOG00000005998) #18	RNF151 (ENSCPOG00000011654) #19	ENSCPOG00000011651 ##20	NDUFB10 (ENSCPOG00000038375) #21	RPL3L (ENSCPOG00000011631) #22	MSRB1 (ENSCPOG00000011627) #23	HS3ST6 (ENSCPOG00000014346) #24	ENSCPOG00000001543 #26	HAGH (ENSCPOG00000024438) #28	IGFALS (ENSCPOG00000033322) #29	NUBP2 (ENSCPOG00000008071) #30	SPSB3 (ENSCPOG00000026170) #31	EME2 (ENSCPOG00000032066) #32	MRPS34 (ENSCPOG00000005379) #33	NME3 (ENSCPOG00000035161) #34	MAPK8IP3 (ENSCPOG00000005354) #35	JPT2 (ENSCPOG00000032923) #36	CRAMP1 (ENSCPOG00000005336)	TMEM204 (ENSCPOG00000030328)	IFT140 (ENSCPOG00000003314)
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Long-tailed chinchilla	MODERN SPECIES	149	RAB26 (ENSCLAG00000016173) #8	PKD1 (ENSCLAG00000013843) #9	TSC2 (ENSCLAG00000013345) #10	NTHL1 (ENSCLAG00000011819) #11	NHERF2 (ENSCLAG00000013193) #12	NPW (ENSCLAG00000014103) #13	ZNF598 (ENSCLAG00000012014) #14	SYNGR3 (ENSCLAG00000014459) #15	GFER (ENSCLAG00000013056) #16	NOXO1 (ENSCLAG00000012905) #17	TBL3 (ENSCLAG00000013342) #18	RNF151 (ENSCLAG00000014779) #19	ENSCLAG00000016080 ##20	NDUFB10 (ENSCLAG00000013856) #21	ENSCLAG00000016182	RPL3L (ENSCLAG00000015614) #22	MSRB1 (ENSCLAG00000016348) #23	HS3ST6 (ENSCLAG00000011879) #24	ENSCLAG00000012822 #26	HAGH (ENSCLAG00000013689) #28	IGFALS (ENSCLAG00000014739) #29	NUBP2 (ENSCLAG00000015595) #30	SPSB3 (ENSCLAG00000013801) #31	EME2 (ENSCLAG00000015876) #32	MRPS34 (ENSCLAG00000015224) #33	NME3 (ENSCLAG00000015018) #34	MAPK8IP3 (ENSCLAG00000014643) #35	JPT2 (ENSCLAG00000014793) #36	CRAMP1 (ENSCLAG00000013881)	IFT140 (ENSCLAG00000013535)	TMEM204 (ENSCLAG00000015782)
Degu	MODERN SPECIES	62	CASKIN1 (ENSODEG00000013245)	TRAF7 (ENSODEG00000013446) #7	RAB26 (ENSODEG00000015360) #8	PKD1 (ENSODEG00000015073) #9	TSC2 (ENSODEG00000013876) #10	NTHL1 (ENSODEG00000014067) #11	NHERF2 (ENSODEG00000013896) #12	ENSODEG00000015297 #13	ZNF598 (ENSODEG00000014650) #14	SYNGR3 (ENSODEG00000014513) #15	GFER (ENSODEG00000014439) #16	NOXO1 (ENSODEG00000013919) #17	TBL3 (ENSODEG00000013930) #18	RNF151 (ENSODEG00000014607) #19	ENSODEG00000013906 ##20	RPL3L (ENSODEG00000015166) #22	ENSODEG00000014218 #23	HS3ST6 (ENSODEG00000013773) #24	ENSODEG00000020141	ENSODEG00000013846 #26	FAHD1 (ENSODEG00000020210) #27	HAGH (ENSODEG00000014503) #28	IGFALS (ENSODEG00000014585) #29	NUBP2 (ENSODEG00000014655) #30	SPSB3 (ENSODEG00000014798) #31	EME2 (ENSODEG00000015003) #32	MRPS34 (ENSODEG00000015453) #33	NME3 (ENSODEG00000015019) #34	MAPK8IP3 (ENSODEG00000016004) #35	JPT2 (ENSODEG00000016076) #36	CRAMP1 (ENSODEG00000014456)
Naked mole-rat female	MODERN SPECIES	15	RAB26 (ENSHGLG00000001632) #8	PKD1 (ENSHGLG00000001913) #9	TSC2 (ENSHGLG00000002350) #10	NTHL1 (ENSHGLG00000002461) #11	NHERF2 (ENSHGLG00000002563) #12	ENSHGLG00000032740 #13	ZNF598 (ENSHGLG00000002708) #14	ENSHGLG00000035150	SYNGR3 (ENSHGLG00000031929) #15	GFER (ENSHGLG00000048995) #16	NOXO1 (ENSHGLG00000044783) #17	TBL3 (ENSHGLG00000002431) #18	ENSHGLG00000002492 #19	ENSHGLG00000002542 ##20	ENSHGLG00000003234 #21	RPL3L (ENSHGLG00000003329) #22	HS3ST6 (ENSHGLG00000039701) #24	ENSHGLG00000003597 #26	FAHD1 (ENSHGLG00000041252) #27	HAGH (ENSHGLG00000003923) #28	IGFALS (ENSHGLG00000004496) #29	NUBP2 (ENSHGLG00000004842) #30	SPSB3 (ENSHGLG00000001146) #31	EME2 (ENSHGLG00000038718) #32	MRPS34 (ENSHGLG00000001213) #33	NME3 (ENSHGLG00000001237) #34	MAPK8IP3 (ENSHGLG00000001589) #35	JPT2 (ENSHGLG00000046712) #36	CRAMP1 (ENSHGLG00000001969)	TMEM204 (ENSHGLG00000032434)	IFT140 (ENSHGLG00000002078)
Rodentia_B	ANCESTRAL SPECIES	15	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Kangaroo rat	MODERN SPECIES	333	Caskin1 (ENSDORG00000001740)	Traf7 (ENSDORG00000001727) #7	Rab26 (ENSDORG00000001722) #8	Pkd1 (ENSDORG00000013708) #9	Tsc2 (ENSDORG00000013702) #10	Nthl1 (ENSDORG00000013701) #11	Nherf2 (ENSDORG00000013700) #12	Zfp598 (ENSDORG00000007907) #14	Syngr3 (ENSDORG00000024759) #15	Gfer (ENSDORG00000025553) #16	Noxo1 (ENSDORG00000007379) #17	Tbl3 (ENSDORG00000007377) #18	ENSDORG00000007376 #19	ENSDORG00000007375 ##20	Ndufb10 (ENSDORG00000007374) #21	Rpl3l (ENSDORG00000007373) #22	Msrb1 (ENSDORG00000025189) #23	Hs3st6 (ENSDORG00000023206) #24	Meiob (ENSDORG00000012742) #26	Hagh (ENSDORG00000009673) #28	Igfals (ENSDORG00000009672) #29	Nubp2 (ENSDORG00000009670) #30	Spsb3 (ENSDORG00000009668) #31	ENSDORG00000027160 #32	ENSDORG00000009659 #35	ENSDORG00000026402 #35	Jpt2 (ENSDORG00000025742) #36	Cramp1 (ENSDORG00000013715)	Ift140 (ENSDORG00000004166)	Tmem204 (ENSDORG00000028876)	Telo2 (ENSDORG00000004164)
Myomorpha	ANCESTRAL SPECIES	17	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Lesser Egyptian jerboa	MODERN SPECIES	47	Traf7 (ENSJJAG00000017715) #7	Rab26 (ENSJJAG00000016687) #8	Pkd1 (ENSJJAG00000014558) #9	Tsc2 (ENSJJAG00000010773) #10	Nthl1 (ENSJJAG00000010038) #11	Nherf2 (ENSJJAG00000022481) #12	ENSJJAG00000004536	Zfp598 (ENSJJAG00000012668) #14	Syngr3 (ENSJJAG00000022558) #15	Gfer (ENSJJAG00000002661) #16	Noxo1 (ENSJJAG00000019469) #17	Tbl3 (ENSJJAG00000004124) #18	Rnf151 (ENSJJAG00000006822) #19	ENSJJAG00000011197 ##20	ENSJJAG00000011730 #21	Rpl3l (ENSJJAG00000011979) #22	Msrb1 (ENSJJAG00000023868) #23	Hs3st6 (ENSJJAG00000018711) #24	Meiob (ENSJJAG00000020956) #26	Fahd1 (ENSJJAG00000012552) #27	ENSJJAG00000018924 #28	Igfals (ENSJJAG00000014391) #29	Nubp2 (ENSJJAG00000010092) #30	Spsb3 (ENSJJAG00000005206) #31	Eme2 (ENSJJAG00000022042) #32	Mrps34 (ENSJJAG00000016768) #33	Nme3 (ENSJJAG00000014938) #34	Mapk8ip3 (ENSJJAG00000012043) #35	ENSJJAG00000022922 #36	Cramp1 (ENSJJAG00000019556)	Tmem204 (ENSJJAG00000016676)
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Upper Galilee mountains blind mole rat	MODERN SPECIES	1760			Pkd1 (ENSNGAG00000023541) #9	Tsc2 (ENSNGAG00000021283) #10	Nthl1 (ENSNGAG00000023847) #11	Nherf2 (ENSNGAG00000016521) #12	Npw (ENSNGAG00000022441) #13	Zfp598 (ENSNGAG00000021072) #14	Syngr3 (ENSNGAG00000004429) #15	Gfer (ENSNGAG00000024200) #16	Noxo1 (ENSNGAG00000023406) #17	Rnf151 (ENSNGAG00000003547) #19	Tbl3 (ENSNGAG00000002428) #18	ENSNGAG00000013739 ##20	Ndufb10 (ENSNGAG00000015798) #21	Rpl3l (ENSNGAG00000023163) #22	Msrb1 (ENSNGAG00000015847) #23	Hs3st6 (ENSNGAG00000011421) #24	Meiob (ENSNGAG00000006985) #26	Fahd1 (ENSNGAG00000013637) #27	Hagh (ENSNGAG00000024100) #28	Igfals (ENSNGAG00000014838) #29	Nubp2 (ENSNGAG00000001165) #30	Spsb3 (ENSNGAG00000023785) #31	Mrps34 (ENSNGAG00000023629) #33	Nme3 (ENSNGAG00000022562) #34	Mapk8ip3 (ENSNGAG00000021573) #35	Jpt2 (ENSNGAG00000021166) #36	Cramp1 (ENSNGAG00000012239)	ENSNGAG00000019576	Tmem204 (ENSNGAG00000016981)
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Rat	MODERN SPECIES	1	Traf7 (ENSRNOG00000003131) #7	Rab26 (ENSRNOG00000042086) #8	Pkd1 (ENSRNOG00000010771) #9	Tsc2 (ENSRNOG00000011375) #10	Nthl1 (ENSRNOG00000012213) #11	Nherf2 (ENSRNOG00000002997) #12	Npw (ENSRNOG00000012390) #13	Zfp598 (ENSRNOG00000012434) #14	Syngr3 (ENSRNOG00000012620) #15	Gfer (ENSRNOG00000013370) #16	Noxo1 (ENSRNOG00000025117) #17	Tbl3 (ENSRNOG00000013429) #18	Rnf151 (ENSRNOG00000014127) #19	Rps2 (ENSRNOG00000014179) ##20	Ndufb10 (ENSRNOG00000014568) #21	Rpl3l (ENSRNOG00000014641) #22	Msrb1 (ENSRNOG00000055314) #23	Hs3st6 (ENSRNOG00000014672) #24	Meiob (ENSRNOG00000014711) #26	Fahd1 (ENSRNOG00000014727) #27	Hagh (ENSRNOG00000014743) #28	Igfals (ENSRNOG00000015061) #29	Nubp2 (ENSRNOG00000015090) #30	Spsb3 (ENSRNOG00000015300) #31	Eme2 (ENSRNOG00000024867) #32	Mrps34 (ENSRNOG00000015479) #33	Nme3 (ENSRNOG00000015749) #34	Mapk8ip3 (ENSRNOG00000033568) #35	Jpt2 (ENSRNOG00000024661) #36	Cramp1 (ENSRNOG00000024635)	Ift140 (ENSRNOG00000016545)
Mus	ANCESTRAL SPECIES	21	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Shrew mouse	MODERN SPECIES	13	Caskin1 (MGP_PahariEiJ_G0023505)	Traf7 (MGP_PahariEiJ_G0023506) #7	Rab26 (MGP_PahariEiJ_G0023507) #8	Pkd1 (MGP_PahariEiJ_G0023508) #9	Nthl1 (MGP_PahariEiJ_G0023509) #11	Nherf2 (MGP_PahariEiJ_G0023510) #12	Npw (MGP_PahariEiJ_G0023511) #13	Zfp598 (MGP_PahariEiJ_G0023512) #14	Syngr3 (MGP_PahariEiJ_G0023513) #15	Gfer (MGP_PahariEiJ_G0023514) #16	Noxo1 (MGP_PahariEiJ_G0023515) #17	Tbl3 (MGP_PahariEiJ_G0023516) #18	Rnf151 (MGP_PahariEiJ_G0023517) #19	MGP_PahariEiJ_G0023518 ##20	Ndufb10 (MGP_PahariEiJ_G0023519) #21	Rpl3l (MGP_PahariEiJ_G0023520) #22	Msrb1 (MGP_PahariEiJ_G0023521) #23	Hs3st6 (MGP_PahariEiJ_G0023522) #24	Meiob (MGP_PahariEiJ_G0023523) #26	Hagh (MGP_PahariEiJ_G0023524) #28	Fahd1 (MGP_PahariEiJ_G0023525) #27	Igfals (MGP_PahariEiJ_G0023526) #29	Nubp2 (MGP_PahariEiJ_G0023527) #30	MGP_PahariEiJ_G0023528 #31	Eme2 (MGP_PahariEiJ_G0023529) #32	Mapk8ip3 (MGP_PahariEiJ_G0023530) #35	Mrps34 (MGP_PahariEiJ_G0023531) #33	Nme3 (MGP_PahariEiJ_G0023532) #34	MGP_PahariEiJ_G0023533 #36	MGP_PahariEiJ_G0023534 #36	Cramp1 (MGP_PahariEiJ_G0023535)
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652.r #36	ENSGT00390000003337	ENSGT00940000153417.A
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021188	Caskin1 (MGP_CAROLIEiJ_G0021189)	Traf7 (MGP_CAROLIEiJ_G0021190) #7	Rab26 (MGP_CAROLIEiJ_G0021191) #8	Pkd1 (MGP_CAROLIEiJ_G0021192) #9	Nthl1 (MGP_CAROLIEiJ_G0021193) #11	Nherf2 (MGP_CAROLIEiJ_G0021194) #12	MGP_CAROLIEiJ_G0021195 #13	Syngr3 (MGP_CAROLIEiJ_G0021196) #15	Gfer (MGP_CAROLIEiJ_G0021197) #16	Noxo1 (MGP_CAROLIEiJ_G0021198) #17	Tbl3 (MGP_CAROLIEiJ_G0021199) #18	Rnf151 (MGP_CAROLIEiJ_G0021200) #19	MGP_CAROLIEiJ_G0021201 ##20	Ndufb10 (MGP_CAROLIEiJ_G0021202) #21	Rpl3l (MGP_CAROLIEiJ_G0021203) #22	Msrb1 (MGP_CAROLIEiJ_G0021204) #23	Hs3st6 (MGP_CAROLIEiJ_G0021205) #24	Meiob (MGP_CAROLIEiJ_G0021206) #26	Hagh (MGP_CAROLIEiJ_G0021207) #28	Fahd1 (MGP_CAROLIEiJ_G0021208) #27	Igfals (MGP_CAROLIEiJ_G0021209) #29	Nubp2 (MGP_CAROLIEiJ_G0021210) #30	MGP_CAROLIEiJ_G0021211 #31	Eme2 (MGP_CAROLIEiJ_G0021212) #32	Mapk8ip3 (MGP_CAROLIEiJ_G0021213) #35	Mrps34 (MGP_CAROLIEiJ_G0021214) #33	Nme3 (MGP_CAROLIEiJ_G0021215) #34	MGP_CAROLIEiJ_G0021216 #36	Cramp1 (MGP_CAROLIEiJ_G0021217)	Ift140 (MGP_CAROLIEiJ_G0021218)
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652.r #36	ENSGT00390000003337	ENSGT00940000153417.A
Mouse	MODERN SPECIES	8	Traf7 (ENSMUSG00000052752) #7	Rab26 (ENSMUSG00000079657) #8	Pkd1 (ENSMUSG00000032855) #9	Tsc2 (ENSMUSG00000002496) #10	Nthl1 (ENSMUSG00000041429) #11	Nherf2 (ENSMUSG00000002504) #12	Npw (ENSMUSG00000071230) #13	Zfp598 (ENSMUSG00000041130) #14	Syngr3 (ENSMUSG00000007021) #15	Gfer (ENSMUSG00000040888) #16	Noxo1 (ENSMUSG00000019320) #17	Tbl3 (ENSMUSG00000040688) #18	Rnf151 (ENSMUSG00000008482) #19	Rps2 (ENSMUSG00000044533) ##20	Ndufb10 (ENSMUSG00000040048) #21	Rpl3l (ENSMUSG00000002500) #22	Msrb1 (ENSMUSG00000075705) #23	Hs3st6 (ENSMUSG00000039628) #24	Meiob (ENSMUSG00000024155) #26	Hagh (ENSMUSG00000024158) #28	Fahd1 (ENSMUSG00000045316) #27	Igfals (ENSMUSG00000046070) #29	Nubp2 (ENSMUSG00000039183) #30	Spsb3 (ENSMUSG00000024160) #31	Eme2 (ENSMUSG00000073436) #32	Mapk8ip3 (ENSMUSG00000024163) #35	Mrps34 (ENSMUSG00000038880) #33	Nme3 (ENSMUSG00000073435) #34	Jpt2 (ENSMUSG00000024165) #36	Cramp1 (ENSMUSG00000038002)	Ift140 (ENSMUSG00000024169)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00970000194741	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652.q.b #36	ENSGT00390000003337	ENSGT00940000153417.A
Steppe mouse	MODERN SPECIES	3126	Traf7 (ENSMSIG00000006269) #7	Rab26 (ENSMSIG00000006511) #8	ENSMSIG00000006577	Tsc2 (ENSMSIG00000006743) #10	Nthl1 (ENSMSIG00000007949) #11	Nherf2 (ENSMSIG00000007960) #12	Npw (ENSMSIG00000007993) #13	Zfp598 (ENSMSIG00000008003) #14	ENSMSIG00000008029 #15	ENSMSIG00000008048 #16	Noxo1 (ENSMSIG00000008056) #17	Tbl3 (ENSMSIG00000008080) #18	Rnf151 (ENSMSIG00000008128) #19	Rps2 (ENSMSIG00000008161) ##20	Ndufb10 (ENSMSIG00000008241) #21	Rpl3l (ENSMSIG00000008247) #22	Msrb1 (ENSMSIG00000008280) #23	Hs3st6 (ENSMSIG00000008324) #24	Meiob (ENSMSIG00000008345) #26	Fahd1 (ENSMSIG00000008407) #27	Hagh (ENSMSIG00000008421) #28	Igfals (ENSMSIG00000008467) #29	Nubp2 (ENSMSIG00000008482) #30	ENSMSIG00000008500 #31	Eme2 (ENSMSIG00000008685) #32	Mrps34 (ENSMSIG00000008733) #33	Nme3 (ENSMSIG00000008746) #34	Mapk8ip3 (ENSMSIG00000008777) #35	ENSMSIG00000010638 #36	Cramp1 (ENSMSIG00000010664)	Ift140 (ENSMSIG00000010724)
spretus	MODERN SPECIES	8	Ptx4 (MGP_SPRETEiJ_G0022132)	Telo2 (MGP_SPRETEiJ_G0022131)	Tmem204 (MGP_SPRETEiJ_G0022130)	Ift140 (MGP_SPRETEiJ_G0022129)	Cramp1 (MGP_SPRETEiJ_G0022128)	Jpt2 (MGP_SPRETEiJ_G0022127) #36	Nme3 (MGP_SPRETEiJ_G0022126) #34	Mrps34 (MGP_SPRETEiJ_G0022125) #33	Mapk8ip3 (MGP_SPRETEiJ_G0022124) #35	MGP_SPRETEiJ_G0022123	Spsb3 (MGP_SPRETEiJ_G0022122) #31	Nubp2 (MGP_SPRETEiJ_G0022121) #30	Igfals (MGP_SPRETEiJ_G0022120) #29	MGP_SPRETEiJ_G0022119	Ndufb10 (MGP_SPRETEiJ_G0022118) #21	MGP_SPRETEiJ_G0022117 #22	Fahd1 (MGP_SPRETEiJ_G0022116) #27	Hagh (MGP_SPRETEiJ_G0022115) #28	Meiob (MGP_SPRETEiJ_G0022114) #26	Hs3st6 (MGP_SPRETEiJ_G0022113) #24	Msrb1 (MGP_SPRETEiJ_G0022112) #23	Rnf151 (MGP_SPRETEiJ_G0022111) #19	Tbl3 (MGP_SPRETEiJ_G0022110) #18	Noxo1 (MGP_SPRETEiJ_G0022109) #17	Gfer (MGP_SPRETEiJ_G0022108) #16	Syngr3 (MGP_SPRETEiJ_G0022107) #15	Zfp598 (MGP_SPRETEiJ_G0022106) #14	MGP_SPRETEiJ_G0022105 #13	Nherf2 (MGP_SPRETEiJ_G0022104) #12	Nthl1 (MGP_SPRETEiJ_G0022103) #11	Pkd1 (MGP_SPRETEiJ_G0022102) #9
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Chinese hamster chok1gshd	MODERN SPECIES	229	ENSCGRG00001013600 #7	Rab26 (ENSCGRG00001024291) #8	Pkd1 (ENSCGRG00001020324) #9	Tsc2 (ENSCGRG00001012289) #10	NTHL1 (ENSCGRG00001012482) #11	Nherf2 (ENSCGRG00001015951) #12	Npw (ENSCGRG00001017678) #13	Zfp598 (ENSCGRG00001021070) #14	Syngr3 (ENSCGRG00001014491) #15	Gfer (ENSCGRG00001023595) #16	Noxo1 (ENSCGRG00001020009) #17	Tbl3 (ENSCGRG00001021817) #18	Rnf151 (ENSCGRG00001023396) #19	Rps2 (ENSCGRG00001023670) ##20	Ndufb10 (ENSCGRG00001013121) #21	Rpl3l (ENSCGRG00001016900) #22	Msrb1 (ENSCGRG00001023043) #23	Hs3st6 (ENSCGRG00001024254) #24	Meiob (ENSCGRG00001024640) #26	Fahd1 (ENSCGRG00001013933) #27	Hagh (ENSCGRG00001014522) #28	Igfals (ENSCGRG00001023230) #29	Nubp2 (ENSCGRG00001024233) #30	Spsb3 (ENSCGRG00001017880) #31	Eme2 (ENSCGRG00001014405) #32	Mrps34 (ENSCGRG00001023318) #33	Nme3 (ENSCGRG00001024438) #34	Mapk8ip3 (ENSCGRG00001009625) #35	Jpt2 (ENSCGRG00001023398) #36	Cramp1 (ENSCGRG00001024738)	Ift140 (ENSCGRG00001020155)
Golden Hamster	MODERN SPECIES	733	Caskin1 (ENSMAUG00000008186)	Traf7 (ENSMAUG00000010013) #7	Rab26 (ENSMAUG00000008853) #8	Pkd1 (ENSMAUG00000014808) #9	Tsc2 (ENSMAUG00000007571) #10	Nthl1 (ENSMAUG00000011440) #11	Nherf2 (ENSMAUG00000005047) #12	Npw (ENSMAUG00000009076) #13	Zfp598 (ENSMAUG00000020596) #14	Syngr3 (ENSMAUG00000004857) #15	Gfer (ENSMAUG00000001778) #16	Noxo1 (ENSMAUG00000019212) #17	Tbl3 (ENSMAUG00000008718) #18	Rnf151 (ENSMAUG00000004941) #19	Ndufb10 (ENSMAUG00000007967) #21	Rpl3l (ENSMAUG00000008094) #22	Msrb1 (ENSMAUG00000019299) #23	Hs3st6 (ENSMAUG00000018680) #24	Meiob (ENSMAUG00000021803) #26	Fahd1 (ENSMAUG00000008227) #27	Hagh (ENSMAUG00000012144) #28	Igfals (ENSMAUG00000021813) #29	Nubp2 (ENSMAUG00000006099) #30	Spsb3 (ENSMAUG00000011949) #31	Eme2 (ENSMAUG00000008967) #32	Mrps34 (ENSMAUG00000015906) #33	Nme3 (ENSMAUG00000008485) #34	Mapk8ip3 (ENSMAUG00000010859) #35	ENSMAUG00000007417	Jpt2 (ENSMAUG00000005592) #36	Cramp1 (ENSMAUG00000019364)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Northern American deer mouse	MODERN SPECIES	21	Rab26 (ENSPEMG00000016748) #8	ENSPEMG00000027366	ENSPEMG00000026802 #9	Tsc2 (ENSPEMG00000017951) #10	Nthl1 (ENSPEMG00000015321) #11	Nherf2 (ENSPEMG00000008746) #12	Npw (ENSPEMG00000013065) #13	Zfp598 (ENSPEMG00000013518) #14	Syngr3 (ENSPEMG00000025114) #15	Gfer (ENSPEMG00000024300) #16	Noxo1 (ENSPEMG00000018859) #17	Tbl3 (ENSPEMG00000009768) #18	Rnf151 (ENSPEMG00000010081) #19	ENSPEMG00000012503 ##20	Ndufb10 (ENSPEMG00000018512) #21	Rpl3l (ENSPEMG00000010667) #22	Msrb1 (ENSPEMG00000018902) #23	Hs3st6 (ENSPEMG00000016998) #24	ENSPEMG00000025436 #26	Spdl1 (ENSPEMG00000009912)	Dock2 (ENSPEMG00000015007)	Insyn2b (ENSPEMG00000015788)	Foxi1 (ENSPEMG00000015123)	4930469K13Rik (ENSPEMG00000029094)	Lcp2 (ENSPEMG00000011935)	Kcnmb1 (ENSPEMG00000025688)	Kcnip1 (ENSPEMG00000007681)	Gabrp (ENSPEMG00000008255)	Ranbp17 (ENSPEMG00000013086)	Tlx3 (ENSPEMG00000009002)	ENSPEMG00000010032
Prairie vole	MODERN SPECIES	15	Traf7 (ENSMOCG00000017636) #7	Rab26 (ENSMOCG00000014524) #8	Pkd1 (ENSMOCG00000018861) #9	Tsc2 (ENSMOCG00000014270) #10	Nthl1 (ENSMOCG00000022584) #11	Nherf2 (ENSMOCG00000022945) #12	Npw (ENSMOCG00000007567) #13	Zfp598 (ENSMOCG00000015693) #14	Syngr3 (ENSMOCG00000010060) #15	Gfer (ENSMOCG00000003379) #16	Noxo1 (ENSMOCG00000022179) #17	Tbl3 (ENSMOCG00000019634) #18	Rnf151 (ENSMOCG00000021816) #19	ENSMOCG00000014200 ##20	Ndufb10 (ENSMOCG00000011750) #21	Rpl3l (ENSMOCG00000020012) #22	Msrb1 (ENSMOCG00000013864) #23	Hs3st6 (ENSMOCG00000022877) #24	Meiob (ENSMOCG00000020796) #26	Fahd1 (ENSMOCG00000001032) #27	Hagh (ENSMOCG00000020674) #28	Igfals (ENSMOCG00000013702) #29	Nubp2 (ENSMOCG00000003091) #30	Spsb3 (ENSMOCG00000000734) #31	Eme2 (ENSMOCG00000019621) #32	Mrps34 (ENSMOCG00000004274) #33	ENSMOCG00000003271 #34	Mapk8ip3 (ENSMOCG00000018334) #35	Jpt2 (ENSMOCG00000022903) #36	Cramp1 (ENSMOCG00000015569)	ENSMOCG00000011625
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000017606.a.b #22
Hedgehog	MODERN SPECIES	3846																RPL3L (ENSEEUG00000005554) #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Carnivora	ANCESTRAL SPECIES	12	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Felidae	ANCESTRAL SPECIES	25	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Panthera	ANCESTRAL SPECIES	29	ENSGT00940000157022 #7	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Tiger	MODERN SPECIES	590	ENSPTIG00000015543	ENSPTIG00000015335	BRICD5 (ENSPTIG00000015207)	MLST8 (ENSPTIG00000014849)	TRAF7 (ENSPTIG00000014610) #7	ENSPTIG00000014331	RAB26 (ENSPTIG00000014200) #8	NTHL1 (ENSPTIG00000011471) #11	NHERF2 (ENSPTIG00000011167) #12	GFER (ENSPTIG00000011023) #16	ENSPTIG00000010738 #17	TBL3 (ENSPTIG00000010377) #18	ENSPTIG00000010338 #19	ENSPTIG00000010284 ##20	NDUFB10 (ENSPTIG00000009910) #21	RPL3L (ENSPTIG00000009722) #22	MSRB1 (ENSPTIG00000009446) #23	HS3ST6 (ENSPTIG00000009671) #24	ENSPTIG00000009036 #26	FAHD1 (ENSPTIG00000009011) #27	HAGH (ENSPTIG00000008853) #28	NUBP2 (ENSPTIG00000008814) #30	EME2 (ENSPTIG00000008505) #32	MAPK8IP3 (ENSPTIG00000007779) #35	JPT2 (ENSPTIG00000007704) #36	TMEM204 (ENSPTIG00000006591)	IFT140 (ENSPTIG00000005835)	TELO2 (ENSPTIG00000005753)	PTX4 (ENSPTIG00000005448)	CLCN7 (ENSPTIG00000005037)	UNKL (ENSPTIG00000000863)
Panthera_a	ANCESTRAL SPECIES	31	ENSGT00940000158025.a.a.b	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
lion	MODERN SPECIES	16	CASKIN1 (ENSPLOG00000020847)	TRAF7 (ENSPLOG00000020731) #7	RAB26 (ENSPLOG00000020582) #8	TSC2 (ENSPLOG00000016635) #10	NTHL1 (ENSPLOG00000016125) #11	NHERF2 (ENSPLOG00000015907) #12	ENSPLOG00000015835 #13	ZNF598 (ENSPLOG00000015814) #14	SYNGR3 (ENSPLOG00000015769) #15	GFER (ENSPLOG00000015737) #16	NOXO1 (ENSPLOG00000015582) #17	TBL3 (ENSPLOG00000015297) #18	RNF151 (ENSPLOG00000015190) #19	RPS2 (ENSPLOG00000015051) ##20	NDUFB10 (ENSPLOG00000014912) #21	RPL3L (ENSPLOG00000014800) #22	MSRB1 (ENSPLOG00000014740) #23	HS3ST6 (ENSPLOG00000014723) #24	ENSPLOG00000014482 #26	FAHD1 (ENSPLOG00000014422) #27	HAGH (ENSPLOG00000014311) #28	IGFALS (ENSPLOG00000014256) #29	NUBP2 (ENSPLOG00000014050) #30	SPSB3 (ENSPLOG00000013972) #31	EME2 (ENSPLOG00000013867) #32	MRPS34 (ENSPLOG00000013830) #33	NME3 (ENSPLOG00000013752) #34	MAPK8IP3 (ENSPLOG00000012791) #35	JPT2 (ENSPLOG00000012622) #36	CRAMP1 (ENSPLOG00000011890)	TMEM204 (ENSPLOG00000011810)
leopard	MODERN SPECIES	53	MLST8 (ENSPPRG00000022843)	TRAF7 (ENSPPRG00000002445) #7	RAB26 (ENSPPRG00000002683) #8	TSC2 (ENSPPRG00000019360) #10	NTHL1 (ENSPPRG00000021879) #11	NHERF2 (ENSPPRG00000024928) #12	NPW (ENSPPRG00000024862) #13	ZNF598 (ENSPPRG00000024412) #14	SYNGR3 (ENSPPRG00000024180) #15	GFER (ENSPPRG00000023925) #16	ENSPPRG00000000893 #18	ENSPPRG00000001717 #18	RNF151 (ENSPPRG00000001989) #19	RPS2 (ENSPPRG00000004155) ##20	ENSPPRG00000004667 #21	RPL3L (ENSPPRG00000005785) #22	ENSPPRG00000006325 #23	ENSPPRG00000009865 #23	HS3ST6 (ENSPPRG00000010023) #24	ENSPPRG00000011909 #26	FAHD1 (ENSPPRG00000012078) #27	HAGH (ENSPPRG00000012875) #28	IGFALS (ENSPPRG00000013707) #29	NUBP2 (ENSPPRG00000017030) #30	SPSB3 (ENSPPRG00000018726) #31	EME2 (ENSPPRG00000020258) #32	MRPS34 (ENSPPRG00000021470) #33	ENSPPRG00000021662 #34	MAPK8IP3 (ENSPPRG00000001108) #35	JPT2 (ENSPPRG00000001951) #36	CRAMP1 (ENSPPRG00000003952)
Cat	MODERN SPECIES	247	TRAF7 (ENSFCAG00000006348) #7	RAB26 (ENSFCAG00000018898) #8	PKD1 (ENSFCAG00000002212) #9	TSC2 (ENSFCAG00000011746) #10	NTHL1 (ENSFCAG00000002211) #11	NHERF2 (ENSFCAG00000022929) #12	ENSFCAG00000042975 #13	ZNF598 (ENSFCAG00000025422) #14	SYNGR3 (ENSFCAG00000011743) #15	GFER (ENSFCAG00000008479) #16	NOXO1 (ENSFCAG00000011741) #17	TBL3 (ENSFCAG00000011740) #18	RNF151 (ENSFCAG00000011739) #19	RPS2 (ENSFCAG00000029191) ##20	NDUFB10 (ENSFCAG00000011738) #21	RPL3L (ENSFCAG00000011737) #22	MSRB1 (ENSFCAG00000039302) #23	HS3ST6 (ENSFCAG00000038639) #24	MEIOB (ENSFCAG00000011733) #26	FAHD1 (ENSFCAG00000031483) #27	HAGH (ENSFCAG00000011731) #28	IGFALS (ENSFCAG00000040872) #29	NUBP2 (ENSFCAG00000024659) #30	SPSB3 (ENSFCAG00000011730) #31	EME2 (ENSFCAG00000011728) #32	MRPS34 (ENSFCAG00000022788) #33	NME3 (ENSFCAG00000046405) #34	MAPK8IP3 (ENSFCAG00000011724) #35	JPT2 (ENSFCAG00000034589) #36	CRAMP1 (ENSFCAG00000011852)	IFT140 (ENSFCAG00000010653)
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Canidae	ANCESTRAL SPECIES	3	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A	ENSGT00390000015528
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A	ENSGT00390000015528
Dingo	MODERN SPECIES	172	TRAF7 (ENSCAFG00020026190) #7	RAB26 (ENSCAFG00020026193) #8	ENSCAFG00020026197 #9	ENSCAFG00020026208 #10	NTHL1 (ENSCAFG00020026294) #11	NHERF2 (ENSCAFG00020026295) #12	ENSCAFG00020026296 #13	ZNF598 (ENSCAFG00020026302) #14	SYNGR3 (ENSCAFG00020026317) #15	GFER (ENSCAFG00020026319) #16	NOXO1 (ENSCAFG00020026320) #17	TBL3 (ENSCAFG00020026321) #18	RNF151 (ENSCAFG00020026323) #19	ENSCAFG00020026327 ##20	ENSCAFG00020000199 #21	RPL3L (ENSCAFG00020000233) #22	MSRB1 (ENSCAFG00020000325) #23	HS3ST6 (ENSCAFG00020000329) #24	ENSCAFG00020000382 #26	FAHD1 (ENSCAFG00020000583) #27	HAGH (ENSCAFG00020000595) #28	IGFALS (ENSCAFG00020000602) #29	NUBP2 (ENSCAFG00020000610) #30	SPSB3 (ENSCAFG00020000616) #31	EME2 (ENSCAFG00020000621) #32	MRPS34 (ENSCAFG00020000675) #33	MAPK8IP3 (ENSCAFG00020000709) #35	JPT2 (ENSCAFG00020000738) #36	CRAMP1 (ENSCAFG00020000788)	IFT140 (ENSCAFG00020001129)	TMEM204 (ENSCAFG00020001166)
Dog	MODERN SPECIES	34	MLST8 (ENSCAFG00845004640)	BRICD5 (ENSCAFG00845004655)	TRAF7 (ENSCAFG00845004697) #7	RAB26 (ENSCAFG00845015769) #8	TSC2 (ENSCAFG00845016084) #10	NTHL1 (ENSCAFG00845016947) #11	NHERF2 (ENSCAFG00845017011) #12	ZNF598 (ENSCAFG00845017173) #14	SYNGR3 (ENSCAFG00845017505) #15	GFER (ENSCAFG00845017559) #16	NOXO1 (ENSCAFG00845017645) #17	TBL3 (ENSCAFG00845017737) #18	RNF151 (ENSCAFG00845018062) #19	NDUFB10 (ENSCAFG00845018108) #21	ENSCAFG00845018221 ##20	RPL3L (ENSCAFG00845018359) #22	MSRB1 (ENSCAFG00845018543) #23	HS3ST6 (ENSCAFG00845018590) #24	ENSCAFG00845018651 #26	HAGH (ENSCAFG00845018825) #28	FAHD1 (ENSCAFG00845019076) #27	IGFALS (ENSCAFG00845019117) #29	NUBP2 (ENSCAFG00845019149) #30	SPSB3 (ENSCAFG00845019224) #31	ENSCAFG00845019435 #32	MRPS34 (ENSCAFG00845019497) #33	MAPK8IP3 (ENSCAFG00845019811) #35	JPT2 (ENSCAFG00845020882) #36	CRAMP1 (ENSCAFG00845020921)	IFT140 (ENSCAFG00845021074)	ENSCAFG00845021199
Red fox	MODERN SPECIES	200	ENSVVUG00000009330	TRAF7 (ENSVVUG00000009335) #7	RAB26 (ENSVVUG00000009402) #8	PKD1 (ENSVVUG00000009411) #9	TSC2 (ENSVVUG00000009475) #10	NTHL1 (ENSVVUG00000009512) #11	SLC9A3R2 (ENSVVUG00000009515) #12	ZNF598 (ENSVVUG00000009523) #14	SYNGR3 (ENSVVUG00000009541) #15	GFER (ENSVVUG00000009553) #16	ENSVVUG00000009559 #17	TBL3 (ENSVVUG00000009589) #18	RNF151 (ENSVVUG00000009605) #19	ENSVVUG00000009633 ##20	NDUFB10 (ENSVVUG00000009798) #21	RPL3L (ENSVVUG00000009805) #22	MSRB1 (ENSVVUG00000009825) #23	HS3ST6 (ENSVVUG00000009829) #24	MEIOB (ENSVVUG00000009837) #26	FAHD1 (ENSVVUG00000009934) #27	HAGH (ENSVVUG00000009937) #28	IGFALS (ENSVVUG00000009953) #29	NUBP2 (ENSVVUG00000009958) #30	SPSB3 (ENSVVUG00000009994) #31	MRPS34 (ENSVVUG00000010000) #33	MAPK8IP3 (ENSVVUG00000010026) #35	JPT2 (ENSVVUG00000010820)	IFT140 (ENSVVUG00000010908)	TMEM204 (ENSVVUG00000010997)	TELO2 (ENSVVUG00000011008)	PTX4 (ENSVVUG00000011033)
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Mustelinae	ANCESTRAL SPECIES	15	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
American mink	MODERN SPECIES	111	TRAF7 (ENSNVIG00000022804) #7	RAB26 (ENSNVIG00000022798) #8	PKD1 (ENSNVIG00000022607) #9	TSC2 (ENSNVIG00000022292) #10	NTHL1 (ENSNVIG00000022264) #11	NHERF2 (ENSNVIG00000022253) #12	ENSNVIG00000022244 #13	ZNF598 (ENSNVIG00000022223) #14	SYNGR3 (ENSNVIG00000022207) #15	GFER (ENSNVIG00000022204) #16	NOXO1 (ENSNVIG00000022193) #17	TBL3 (ENSNVIG00000022174) #18	RNF151 (ENSNVIG00000022168) #19	ENSNVIG00000022145	ENSNVIG00000022130 #21	RPL3L (ENSNVIG00000022110) #22	MSRB1 (ENSNVIG00000022096) #23	HS3ST6 (ENSNVIG00000022091) #24	C9J0S1 (ENSNVIG00000022084) #26	FAHD1 (ENSNVIG00000022077) #27	ENSNVIG00000022054 #28	IGFALS (ENSNVIG00000022037) #29	NUBP2 (ENSNVIG00000022036) #30	SPSB3 (ENSNVIG00000022024) #31	EME2 (ENSNVIG00000022005) #32	MRPS34 (ENSNVIG00000021989) #33	ENSNVIG00000021975 #34	MAPK8IP3 (ENSNVIG00000019434) #35	JPT2 (ENSNVIG00000019338) #36	CRAMP1 (ENSNVIG00000019268)	TM204 (ENSNVIG00000019228)
Ferret	MODERN SPECIES	189	TRAF7 (ENSMPUG00000015411) #7	RAB26 (ENSMPUG00000015412) #8	PKD1 (ENSMPUG00000015425) #9	ENSMPUG00000020060	TSC2 (ENSMPUG00000015487) #10	NTHL1 (ENSMPUG00000015492) #11	NHERF2 (ENSMPUG00000015496) #12	ZNF598 (ENSMPUG00000015523) #14	SYNGR3 (ENSMPUG00000015525) #15	GFER (ENSMPUG00000015534) #16	NOXO1 (ENSMPUG00000015539) #17	TBL3 (ENSMPUG00000015545) #18	RNF151 (ENSMPUG00000015546) #19	RPS2 (ENSMPUG00000015547) ##20	NDUFB10 (ENSMPUG00000015557) #21	RPL3L (ENSMPUG00000015565) #22	HS3ST6 (ENSMPUG00000015567) #24	ENSMPUG00000015569 #26	FAHD1 (ENSMPUG00000020061) #27	HAGH (ENSMPUG00000015572) #28	IGFALS (ENSMPUG00000015594) #29	NUBP2 (ENSMPUG00000015596) #30	SPSB3 (ENSMPUG00000015597) #31	EME2 (ENSMPUG00000015605) #32	MRPS34 (ENSMPUG00000015607) #33	MAPK8IP3 (ENSMPUG00000015614) #35	CRAMP1 (ENSMPUG00000015618)	ENSMPUG00000020062	IFT140 (ENSMPUG00000015620)	TMEM204 (ENSMPUG00000015628)	TELO2 (ENSMPUG00000015631)
Ursidae	ANCESTRAL SPECIES	3	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812.c #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.f #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Giant Panda	MODERN SPECIES	1	RAB26 (ENSAMEG00000017794) #8	PKD1 (ENSAMEG00000017756) #9	TSC2 (ENSAMEG00000017702) #10	ENSAMEG00000024310	NHERF2 (ENSAMEG00000017688) #12	NPW (ENSAMEG00000017686) #13	ZNF598 (ENSAMEG00000017681) #14	ENSAMEG00000029661 #15	ENSAMEG00000026689 #16	ENSAMEG00000017671 #17	ENSAMEG00000031000 #17	TBL3 (ENSAMEG00000017654) #18	RNF151 (ENSAMEG00000017653) #19	RPS2 (ENSAMEG00000007366) ##20	NDUFB10 (ENSAMEG00000008522) #21	RPL3L (ENSAMEG00000008489) #22	MSRB1 (ENSAMEG00000008487) #23	ENSAMEG00000025433 #24	ENSAMEG00000008475 #26	FAHD1 (ENSAMEG00000018730) #27	IGFALS (ENSAMEG00000008445) #29	NUBP2 (ENSAMEG00000008409) #30	SPSB3 (ENSAMEG00000008400) #31	EME2 (ENSAMEG00000008393) #32	MRPS34 (ENSAMEG00000031331) #33	ENSAMEG00000024318 #34	MAPK8IP3 (ENSAMEG00000008238) #35	JPT2 (ENSAMEG00000008232) #36	CRAMP1 (ENSAMEG00000008213)	IFT140 (ENSAMEG00000008128)	ENSAMEG00000008206
Ursus	ANCESTRAL SPECIES	9	ENSGT00940000158025.a.a.b	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000169534	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812.c #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b #20	ENSGT00390000006348.f #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Polar bear	MODERN SPECIES	200	BRICD5 (ENSUMAG00000022316)	MLST8 (ENSUMAG00000022311)	ENSUMAG00000022302	RAB26 (ENSUMAG00000022292) #8	TSC2 (ENSUMAG00000022263) #10	ENSUMAG00000022259	NTHL1 (ENSUMAG00000022257) #11	ENSUMAG00000022255 #12	ZNF598 (ENSUMAG00000022253) #14	GFER (ENSUMAG00000022251) #16	NOXO1 (ENSUMAG00000022239) #17	TBL3 (ENSUMAG00000022149) #18	RNF151 (ENSUMAG00000022133) #19	RPS2 (ENSUMAG00000022123) #20	NDUFB10 (ENSUMAG00000022118) #21	RPL3L (ENSUMAG00000022104) #22	ENSUMAG00000022090 #23	ENSUMAG00000022070 #26	FAHD1 (ENSUMAG00000022065) #27	HAGH (ENSUMAG00000022061) #28	NUBP2 (ENSUMAG00000022054) #30	SPSB3 (ENSUMAG00000022049) #31	MAPK8IP3 (ENSUMAG00000021776) #35	JPT2 (ENSUMAG00000021688) #36	CRAMP1 (ENSUMAG00000021635)	TMEM204 (ENSUMAG00000021614)	IFT140 (ENSUMAG00000021605)	TELO2 (ENSUMAG00000021492)	PTX4 (ENSUMAG00000021453)	CLCN7 (ENSUMAG00000021373)	ENSUMAG00000021354
American black bear	MODERN SPECIES	4606										NOXO1 (ENSUAMG00000019237) #17	TBL3 (ENSUAMG00000019276) #18	RNF151 (ENSUAMG00000019278) #19	ENSUAMG00000019281 ##20	ENSUAMG00000019317	NDUFB10 (ENSUAMG00000019319) #21	RPL3L (ENSUAMG00000019320) #22	ENSUAMG00000019323 #23	HS3ST6 (ENSUAMG00000019324) #24
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Chiroptera	ANCESTRAL SPECIES	12	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Microchiroptera	ANCESTRAL SPECIES	17	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Greater horseshoe bat	MODERN SPECIES	47	RAB26 (ENSRFEG00010021426) #8	PKD1 (ENSRFEG00010021355) #9	TSC2 (ENSRFEG00010021226) #10	NTHL1 (ENSRFEG00010021165) #11	NHERF2 (ENSRFEG00010021131) #12	ENSRFEG00010021115 #13	ZNF598 (ENSRFEG00010021099) #14	SYNGR3 (ENSRFEG00010021081) #15	ENSRFEG00010021061 #16	NOXO1 (ENSRFEG00010021044) #17	TBL3 (ENSRFEG00010020999) #18	ENSRFEG00010020973	RNF151 (ENSRFEG00010020958) #19	RPS2 (ENSRFEG00010020920) ##20	NDUFB10 (ENSRFEG00010020889) #21	RPL3L (ENSRFEG00010020862) #22	MSRB1 (ENSRFEG00010020839) #23	HS3ST6 (ENSRFEG00010020816) #24	ENSRFEG00010020743 #26	FAHD1 (ENSRFEG00010020709) #27	HAGH (ENSRFEG00010020660) #28	IGFALS (ENSRFEG00010020626) #29	NUBP2 (ENSRFEG00010020577) #30	SPSB3 (ENSRFEG00010020550) #31	EME2 (ENSRFEG00010020532) #32	MRPS34 (ENSRFEG00010020489) #33	MAPK8IP3 (ENSRFEG00010020345) #35	JPT2 (ENSRFEG00010020239) #36	CRAMP1 (ENSRFEG00010020192)	TMEM204 (ENSRFEG00010020163)	IFT140 (ENSRFEG00010020088)
Microbat	MODERN SPECIES	1269	MLST8 (ENSMLUG00000003950)	CASKIN1 (ENSMLUG00000004298)	TRAF7 (ENSMLUG00000004287) #7	PKD1 (ENSMLUG00000004260) #9	TSC2 (ENSMLUG00000004241) #10	NTHL1 (ENSMLUG00000004234) #11	NHERF2 (ENSMLUG00000005825) #12	ZNF598 (ENSMLUG00000004224) #14	ENSMLUG00000028770	GFER (ENSMLUG00000030630) #16	NOXO1 (ENSMLUG00000011725) #17	TBL3 (ENSMLUG00000011684) #18	RNF151 (ENSMLUG00000011679) #19	ENSMLUG00000011660 ##20	ENSMLUG00000011655 #21	RPL3L (ENSMLUG00000011638) #22	MSRB1 (ENSMLUG00000011634) #23	HS3ST6 (ENSMLUG00000011625) #24	ENSMLUG00000000791 #26	FAHD1 (ENSMLUG00000000789) #27	HAGH (ENSMLUG00000000782) #28	IGFALS (ENSMLUG00000000776) #29	NUBP2 (ENSMLUG00000000768) #30	SPSB3 (ENSMLUG00000028814) #31	EME2 (ENSMLUG00000000758) #32	MRPS34 (ENSMLUG00000028772) #33	NME3 (ENSMLUG00000000754) #34	MAPK8IP3 (ENSMLUG00000000736) #35	JPT2 (ENSMLUG00000000730) #36	CRAMP1 (ENSMLUG00000000709)	TMEM204 (ENSMLUG00000010040)
Megabat	MODERN SPECIES	3528								ZNF598 (ENSPVAG00000016717) #14	SYNGR3 (ENSPVAG00000016716) #15	GFER (ENSPVAG00000016715) #16	NOXO1 (ENSPVAG00000016714) #17	TBL3 (ENSPVAG00000016710) #18	RNF151 (ENSPVAG00000016706) #19	RPS2 (ENSPVAG00000016704) ##20	NDUFB10 (ENSPVAG00000016701) #21	RPL3L (ENSPVAG00000016699) #22	ENSPVAG00000016697 #23	HS3ST6 (ENSPVAG00000016696) #24	ENSPVAG00000016695 #26	HAGH (ENSPVAG00000016691) #28	NUBP2 (ENSPVAG00000016689) #30	SPSB3 (ENSPVAG00000016687) #31	EME2 (ENSPVAG00000016683) #32	MRPS34 (ENSPVAG00000016682) #33	NME3 (ENSPVAG00000016681) #34	MAPK8IP3 (ENSPVAG00000016674) #35	JPT2 (ENSPVAG00000016673) #36	CRAMP1 (ENSPVAG00000016669)	ENSPVAG00000016665	TMEM204 (ENSPVAG00000016663)	IFT140 (ENSPVAG00000016662)
Equus	ANCESTRAL SPECIES	32	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528	ENSGT00940000153417.A
Donkey	MODERN SPECIES	5	TRAF7 (ENSEASG00005004810) #7	RAB26 (ENSEASG00005025128) #8	TSC2 (ENSEASG00005004724) #10	NTHL1 (ENSEASG00005004702) #11	NHERF2 (ENSEASG00005004685) #12	ENSEASG00005004672 #13	ZNF598 (ENSEASG00005004666) #14	SYNGR3 (ENSEASG00005004661) #15	ENSEASG00005004659 #16	NOXO1 (ENSEASG00005004653) #17	TBL3 (ENSEASG00005004649) #18	ENSEASG00005025509 #19	RPS2 (ENSEASG00005004630) ##20	NDUFB10 (ENSEASG00005028164) #21	ENSEASG00005033190	RPL3L (ENSEASG00005009140) #22	HS3ST6 (ENSEASG00005004607) #24	ENSEASG00005015561	ENSEASG00005004600 #26	FAHD1 (ENSEASG00005030060) #27	HAGH (ENSEASG00005004592) #28	IGFALS (ENSEASG00005004586) #29	NUBP2 (ENSEASG00005035230) #30	SPSB3 (ENSEASG00005026398) #31	ENSEASG00005025437 #32	ENSEASG00005025961 #33	NME3 (ENSEASG00005035536) #34	ENSEASG00005001955 #35	ENSEASG00005034484 #35	ENSEASG00005038396 #35	JPT2 (ENSEASG00005025904) #36
Horse	MODERN SPECIES	4	TRAF7 (ENSECAG00000017744) #7	PKD1 (ENSECAG00000006899) #9	RAB26 (ENSECAG00000020903) #8	TSC2 (ENSECAG00000021222) #10	NTHL1 (ENSECAG00000012595) #11	NHERF2 (ENSECAG00000013367) #12	NPW (ENSECAG00000030307) #13	ZNF598 (ENSECAG00000014058) #14	SYNGR3 (ENSECAG00000015298) #15	GFER (ENSECAG00000036054) #16	NOXO1 (ENSECAG00000017619) #17	TBL3 (ENSECAG00000019299) #18	RNF151 (ENSECAG00000008953) #19	RPS2 (ENSECAG00000009065) ##20	NDUFB10 (ENSECAG00000020610) #21	RPL3L (ENSECAG00000020632) #22	HS3ST6 (ENSECAG00000000862) #24	MEIOB (ENSECAG00000001005) #26	ENSECAG00000057961	FAHD1 (ENSECAG00000004353) #27	HAGH (ENSECAG00000005471) #28	IGFALS (ENSECAG00000039211) #29	NUBP2 (ENSECAG00000012545) #30	SPSB3 (ENSECAG00000013413) #31	EME2 (ENSECAG00000016045) #32	MRPS34 (ENSECAG00000016370) #33	NME3 (ENSECAG00000038477) #34	MAPK8IP3 (ENSECAG00000016379) #35	JPT2 (ENSECAG00000026941) #36	CRAMP1 (ENSECAG00000023299)	IFT140 (ENSECAG00000009031)
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Suina	ANCESTRAL SPECIES	28	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A.db
Chacoan peccary	MODERN SPECIES	848							NHERF2 (ENSCWAG00000021621) #12	NPW (ENSCWAG00000021629) #13	ZNF598 (ENSCWAG00000021631) #14	SYNGR3 (ENSCWAG00000009366) #15	GFER (ENSCWAG00000009406) #16	NOXO1 (ENSCWAG00000009428) #17	RNF151 (ENSCWAG00000009774) #19	ENSCWAG00000009812 ##20	NDUFB10 (ENSCWAG00000009923) #21	RPL3L (ENSCWAG00000009981) #22	MSRB1 (ENSCWAG00000010076) #23	HS3ST6 (ENSCWAG00000010100) #24	ENSCWAG00000010137 #26	FAHD1 (ENSCWAG00000010358) #27	HAGH (ENSCWAG00000010381) #28	IGFALS (ENSCWAG00000010469) #29	NUBP2 (ENSCWAG00000010505) #30	SPSB3 (ENSCWAG00000010677) #31	EME2 (ENSCWAG00000010752) #32	MRPS34 (ENSCWAG00000010813) #33	NME3 (ENSCWAG00000010828) #34	ENSCWAG00000010875 #35
Pig	MODERN SPECIES	11	TRAF7 (ENSSSCG00000008043) #7	RAB26 (ENSSSCG00000033691) #8	PKD1 (ENSSSCG00000008041) #9	TSC2 (ENSSSCG00000008040) #10	NTHL1 (ENSSSCG00000008039) #11	NHERF2 (ENSSSCG00000008038) #12	NPW (ENSSSCG00000048627) #13	ZNF598 (ENSSSCG00000023400) #14	SYNGR3 (ENSSSCG00000008036) #15	ENSSSCG00000008035 #16	NOXO1 (ENSSSCG00000008034) #17	TBL3 (ENSSSCG00000037686) #18	RNF151 (ENSSSCG00000034728) #19	ENSSSCG00000033697 ##20	NDUFB10 (ENSSSCG00000030328) #21	RPL3L (ENSSSCG00000032657) #22	MSRB1 (ENSSSCG00000032932) #23	HS3ST6 (ENSSSCG00000031216) #24	ENSSSCG00000025711 #26	ENSSSCG00000008012 #28	FAHD1 (ENSSSCG00000039715) #27	IGFALS (ENSSSCG00000008013) #29	NUBP2 (ENSSSCG00000008014) #30	SPSB3 (ENSSSCG00000039024) #31	EME2 (ENSSSCG00000021467) #32	MRPS34 (ENSSSCG00000008016) #33	NME3 (ENSSSCG00000008017) #34	MAPK8IP3 (ENSSSCG00000008018) #35	JPT2 (ENSSSCG00000008019) #36	CRAMP1 (ENSSSCG00000008026)	IFT140 (ENSSSCG00000008020)
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Camelidae	ANCESTRAL SPECIES	33	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Arabian camel	MODERN SPECIES	41	TRAF7 (ENSCDRG00005015066) #7	RAB26 (ENSCDRG00005014973) #8	PKD1 (ENSCDRG00005014572) #9	TSC2 (ENSCDRG00005013847) #10	NTHL1 (ENSCDRG00005013746) #11	NHERF2 (ENSCDRG00005013637) #12	NPW (ENSCDRG00005013571) #13	ZNF598 (ENSCDRG00005013508) #14	SYNGR3 (ENSCDRG00005013426) #15	GFER (ENSCDRG00005013367) #16	NOXO1 (ENSCDRG00005013253) #17	TBL3 (ENSCDRG00005013168) #18	RNF151 (ENSCDRG00005013092) #19	RPS2 (ENSCDRG00005012917) ##20	NDUFB10 (ENSCDRG00005012823) #21	RPL3L (ENSCDRG00005012772) #22	MSRB1 (ENSCDRG00005012709) #23	HS3ST6 (ENSCDRG00005012599) #24	ENSCDRG00005012343 #26	FAHD1 (ENSCDRG00005012307) #27	HAGH (ENSCDRG00005012164) #28	IGFALS (ENSCDRG00005012131) #29	NUBP2 (ENSCDRG00005012000) #30	SPSB3 (ENSCDRG00005011937) #31	EME2 (ENSCDRG00005011861) #32	MRPS34 (ENSCDRG00005011817) #33	NME3 (ENSCDRG00005011755) #34	MAPK8IP3 (ENSCDRG00005011576) #35	JPT2 (ENSCDRG00005011470) #36	CRAMP1 (ENSCDRG00005011383)	TMEM204 (ENSCDRG00005011342)
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Dolphin	MODERN SPECIES	2804								ZNF598 (ENSTTRG00000011402) #14	SYNGR3 (ENSTTRG00000011401) #15	GFER (ENSTTRG00000011400) #16	NOXO1 (ENSTTRG00000011396) #17	TBL3 (ENSTTRG00000011395) #18	RNF151 (ENSTTRG00000011394) #19	RPS2 (ENSTTRG00000011393) ##20	NDUFB10 (ENSTTRG00000011392) #21	RPL3L (ENSTTRG00000011391) #22	ENSTTRG00000011390 #23	HS3ST6 (ENSTTRG00000011389) #24	ENSTTRG00000011388 #26	FAHD1 (ENSTTRG00000011387) #27	HAGH (ENSTTRG00000011386) #28	IGFALS (ENSTTRG00000011385) #29	NUBP2 (ENSTTRG00000011384) #30	SPSB3 (ENSTTRG00000011383) #31	EME2 (ENSTTRG00000011382) #32	MRPS34 (ENSTTRG00000011381) #33	NME3 (ENSTTRG00000011380) #34	MAPK8IP3 (ENSTTRG00000011379) #35	HN1L (ENSTTRG00000011377) #36	CRAMP1 (ENSTTRG00000011376)	ENSTTRG00000011369
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000158025.a.a.b	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528	ENSGT00940000153417.A
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000158025.a.a.b	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528	ENSGT00940000153417.A
Beluga whale	MODERN SPECIES	48	CASKIN1 (ENSDLEG00000012786)	TRAF7 (ENSDLEG00000012439) #7	RAB26 (ENSDLEG00000012293) #8	TSC2 (ENSDLEG00000007869) #10	NTHL1 (ENSDLEG00000007751) #11	NHERF2 (ENSDLEG00000007744) #12	NPW (ENSDLEG00000007742) #13	ZNF598 (ENSDLEG00000007731) #14	SYNGR3 (ENSDLEG00000007709) #15	ENSDLEG00000007706 #16	NOXO1 (ENSDLEG00000007696) #17	TBL3 (ENSDLEG00000007683) #18	ENSDLEG00000007673 #19	RPS2 (ENSDLEG00000007664) ##20	NDUFB10 (ENSDLEG00000007659) #21	RPL3L (ENSDLEG00000007645) #22	MSRB1 (ENSDLEG00000007639) #23	HS3ST6 (ENSDLEG00000007636) #24	MEIOB (ENSDLEG00000007627) #26	FAHD1 (ENSDLEG00000007618) #27	HAGH (ENSDLEG00000007559) #28	IGFALS (ENSDLEG00000007530) #29	ENSDLEG00000007525 #30	SPSB3 (ENSDLEG00000007517) #31	MRPS34 (ENSDLEG00000007513) #33	NME3 (ENSDLEG00000007506) #34	MAPK8IP3 (ENSDLEG00000007432) #35	JPT2 (ENSDLEG00000007393) #36	CRAMP1 (ENSDLEG00000007347)	TMEM204 (ENSDLEG00000007342)	IFT140 (ENSDLEG00000007323)
Narwhal	MODERN SPECIES	299	CASKIN1 (ENSMMNG00015006590)	TRAF7 (ENSMMNG00015006526) #7	RAB26 (ENSMMNG00015006487) #8	TSC2 (ENSMMNG00015005139) #10	NTHL1 (ENSMMNG00015004918) #11	NHERF2 (ENSMMNG00015004903) #12	NPW (ENSMMNG00015004892) #13	ZNF598 (ENSMMNG00015004887) #14	SYNGR3 (ENSMMNG00015004877) #15	GFER (ENSMMNG00015003991) #16	NOXO1 (ENSMMNG00015003977) #17	TBL3 (ENSMMNG00015003946) #18	RNF151 (ENSMMNG00015003919) #19	ENSMMNG00015003862 ##20	NDUFB10 (ENSMMNG00015003819) #21	RPL3L (ENSMMNG00015003791) #22	MSRB1 (ENSMMNG00015003761) #23	HS3ST6 (ENSMMNG00015003744) #24	ENSMMNG00015003718 #26	FAHD1 (ENSMMNG00015003677) #27	HAGH (ENSMMNG00015003649) #28	IGFALS (ENSMMNG00015003621) #29	NUBP2 (ENSMMNG00015003598) #30	SPSB3 (ENSMMNG00015003567) #31	ENSMMNG00015003543	MRPS34 (ENSMMNG00015003531) #33	NME3 (ENSMMNG00015003514) #34	ENSMMNG00015003486 #35	JPT2 (ENSMMNG00015003456) #36	CRAMP1 (ENSMMNG00015003411)	TMEM204 (ENSMMNG00015003375)
Vaquita	MODERN SPECIES	6	CASKIN1 (ENSPSNG00000016418)	TRAF7 (ENSPSNG00000016265) #7	RAB26 (ENSPSNG00000016117) #8	TSC2 (ENSPSNG00000012396) #10	NTHL1 (ENSPSNG00000012170) #11	NHERF2 (ENSPSNG00000011996) #12	NPW (ENSPSNG00000011925) #13	ZNF598 (ENSPSNG00000011838) #14	SYNGR3 (ENSPSNG00000011768) #15	GFER (ENSPSNG00000011731) #16	NOXO1 (ENSPSNG00000011544) #17	TBL3 (ENSPSNG00000011502) #18	RNF151 (ENSPSNG00000011420) #19	RPS2 (ENSPSNG00000011290) ##20	NDUFB10 (ENSPSNG00000011191) #21	RPL3L (ENSPSNG00000011070) #22	MSRB1 (ENSPSNG00000011031) #23	HS3ST6 (ENSPSNG00000011004) #24	ENSPSNG00000010896 #26	FAHD1 (ENSPSNG00000010819) #27	HAGH (ENSPSNG00000010692) #28	IGFALS (ENSPSNG00000010635) #29	NUBP2 (ENSPSNG00000010556) #30	SPSB3 (ENSPSNG00000010505) #31	MRPS34 (ENSPSNG00000010465) #33	NME3 (ENSPSNG00000010342) #34	MAPK8IP3 (ENSPSNG00000010221) #35	JPT2 (ENSPSNG00000010117) #36	CRAMP1 (ENSPSNG00000009750)	TMEM204 (ENSPSNG00000009646)	IFT140 (ENSPSNG00000009483)
Sperm whale	MODERN SPECIES	282								ZNF598 (ENSPCTG00005021435) #14	SYNGR3 (ENSPCTG00005021486) #15	GFER (ENSPCTG00005021511) #16	NOXO1 (ENSPCTG00005021529) #17	TBL3 (ENSPCTG00005021582) #18	RNF151 (ENSPCTG00005021609) #19	ENSPCTG00005021651 ##20	NDUFB10 (ENSPCTG00005021701) #21	RPL3L (ENSPCTG00005021738) #22	MSRB1 (ENSPCTG00005021766) #23
Blue whale	MODERN SPECIES	6	TRAF7 (ENSBMSG00010011706) #7	RAB26 (ENSBMSG00010011665) #8	ENSBMSG00010011658	TSC2 (ENSBMSG00010011197) #10	NTHL1 (ENSBMSG00010011060) #11	NHERF2 (ENSBMSG00010011027) #12	NPW (ENSBMSG00010011009) #13	ENSBMSG00010011003	ENSBMSG00010010978	GFER (ENSBMSG00010010965) #16	NOXO1 (ENSBMSG00010010936) #17	TBL3 (ENSBMSG00010010856) #18	RNF151 (ENSBMSG00010010820) #19	ENSBMSG00010010763 #20	NDUFB10 (ENSBMSG00010010734) #21	RPL3L (ENSBMSG00010010716) #22	MSRB1 (ENSBMSG00010010701) #23	HS3ST6 (ENSBMSG00010010685) #24	ENSBMSG00010010669 #26	FAHD1 (ENSBMSG00010010608) #27	HAGH (ENSBMSG00010010591) #28	IGFALS (ENSBMSG00010010573) #29	NUBP2 (ENSBMSG00010010561) #30	SPSB3 (ENSBMSG00010010546) #31	MRPS34 (ENSBMSG00010010537) #33	NME3 (ENSBMSG00010010525) #34	ENSBMSG00010010504 #35	JPT2 (ENSBMSG00010010484) #36	CRAMP1 (ENSBMSG00010010410)	TMEM204 (ENSBMSG00010010376)	IFT140 (ENSBMSG00010010364)
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Yarkand deer	MODERN SPECIES	1	TRAF7 (ENSCHYG00000003309) #7	RAB26 (ENSCHYG00000003262) #8	PKD1 (ENSCHYG00000003197) #9	TSC2 (ENSCHYG00000002897) #10	NTHL1 (ENSCHYG00000002795) #11	NHERF2 (ENSCHYG00000002724) #12	ENSCHYG00000002707 #13	ZNF598 (ENSCHYG00000002665) #14	SYNGR3 (ENSCHYG00000002600) #15	GFER (ENSCHYG00000002589) #16	NOXO1 (ENSCHYG00000002547) #17	TBL3 (ENSCHYG00000002506) #18	RNF151 (ENSCHYG00000002494) #19	ENSCHYG00000002454 ##20	NDUFB10 (ENSCHYG00000002424) #21	RPL3L (ENSCHYG00000002392) #22	MSRB1 (ENSCHYG00000002367) #23	HS3ST6 (ENSCHYG00000002357) #24	ENSCHYG00000002342 #26	FAHD1 (ENSCHYG00000002322) #27	HAGH (ENSCHYG00000002161) #28	IGFALS (ENSCHYG00000002142) #29	NUBP2 (ENSCHYG00000002104) #30	ENSCHYG00000002081 #31	ENSCHYG00000002065 #32	MRPS34 (ENSCHYG00000002055) #33	NME3 (ENSCHYG00000002029) #34	ENSCHYG00000002013 #35	ENSCHYG00000002004 #35	ENSCHYG00000001980 #36	CRAMP1 (ENSCHYG00000001817)
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Siberian musk deer	MODERN SPECIES		TRAF7 (ENSMMSG00000000389) #7	RAB26 (ENSMMSG00000000455) #8	PKD1 (ENSMMSG00000000501) #9	TSC2 (ENSMMSG00000000618) #10	NTHL1 (ENSMMSG00000000870) #11	NHERF2 (ENSMMSG00000000918) #12	NPW (ENSMMSG00000000978) #13	ZNF598 (ENSMMSG00000000995) #14	ENSMMSG00000001029	GFER (ENSMMSG00000001094) #16	NOXO1 (ENSMMSG00000001117) #17	TBL3 (ENSMMSG00000001169) #18	RNF151 (ENSMMSG00000001215) #19	ENSMMSG00000001250 ##20	NDUFB10 (ENSMMSG00000001294) #21	RPL3L (ENSMMSG00000001316) #22	MSRB1 (ENSMMSG00000001336) #23	HS3ST6 (ENSMMSG00000001346) #24	ENSMMSG00000001365 #26	FAHD1 (ENSMMSG00000001429) #27	HAGH (ENSMMSG00000001440) #28	IGFALS (ENSMMSG00000001466) #29	NUBP2 (ENSMMSG00000001476) #30	SPSB3 (ENSMMSG00000001495) #31	EME2 (ENSMMSG00000001510) #32	ENSMMSG00000001526 #33	NME3 (ENSMMSG00000001535) #34	MAPK8IP3 (ENSMMSG00000001572) #35	ENSMMSG00000001612	JPT2 (ENSMMSG00000001637) #36	CRAMP1 (ENSMMSG00000001672)
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Rambouillet Sheep	MODERN SPECIES	16	CASKIN1 (ENSOARG00020026131)	TRAF7 (ENSOARG00020026127) #7	RAB26 (ENSOARG00020026123) #8	TSC2 (ENSOARG00020014978) #10	NTHL1 (ENSOARG00020014040) #11	NHERF2 (ENSOARG00020013748) #12	ENSOARG00020013690 #13	ZNF598 (ENSOARG00020013567) #14	SYNGR3 (ENSOARG00020013539) #15	GFER (ENSOARG00020026345) #16	NOXO1 (ENSOARG00020026343) #17	TBL3 (ENSOARG00020026339) #18	RNF151 (ENSOARG00020026336) #19	ENSOARG00020026326 ##20	NDUFB10 (ENSOARG00020026321) #21	RPL3L (ENSOARG00020026318) #22	MSRB1 (ENSOARG00020026316) #23	HS3ST6 (ENSOARG00020026315) #24	ENSOARG00020026311 #26	FAHD1 (ENSOARG00020026309) #27	HAGH (ENSOARG00020026306) #28	IGFALS (ENSOARG00020026302) #29	NUBP2 (ENSOARG00020026299) #30	SPSB3 (ENSOARG00020026298) #31	EME2 (ENSOARG00020026295) #32	MRPS34 (ENSOARG00020026293) #33	NME3 (ENSOARG00020026291) #34	MAPK8IP3 (ENSOARG00020026283) #35	JPT2 (ENSOARG00020026280) #36	CRAMP1 (ENSOARG00020026270)	TMEM204 (ENSOARG00020026266)
Goat	MODERN SPECIES	17	TRAF7 (ENSCHIG00000011495) #7	RAB26 (ENSCHIG00000017901) #8	PKD1 (ENSCHIG00000016351) #9	TSC2 (ENSCHIG00000014230) #10	NTHL1 (ENSCHIG00000014718) #11	NHERF2 (ENSCHIG00000016518) #12	ZNF598 (ENSCHIG00000013018) #14	SYNGR3 (ENSCHIG00000016715) #15	GFER (ENSCHIG00000006049) #16	NOXO1 (ENSCHIG00000019635) #17	TBL3 (ENSCHIG00000007747) #18	RNF151 (ENSCHIG00000015860) #19	ENSCHIG00000022194 ##20	NDUFB10 (ENSCHIG00000017852) #21	MSRB1 (ENSCHIG00000018373) #23	RPL3L (ENSCHIG00000020352) #22	HS3ST6 (ENSCHIG00000019888) #24	ENSCHIG00000013357 #26	FAHD1 (ENSCHIG00000007917) #27	HAGH (ENSCHIG00000022722) #28	IGFALS (ENSCHIG00000005524) #29	NUBP2 (ENSCHIG00000024194) #30	SPSB3 (ENSCHIG00000024292) #31	MRPS34 (ENSCHIG00000026940) #33	NME3 (ENSCHIG00000020916) #34	MAPK8IP3 (ENSCHIG00000020649) #35	JPT2 (ENSCHIG00000009778) #36	CRAMP1 (ENSCHIG00000001484)	TMEM204 (ENSCHIG00000008739)	IFT140 (ENSCHIG00000017137)	TELO2 (ENSCHIG00000012866)
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00990000213154	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Bos	ANCESTRAL SPECIES	9	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000015528
Hybrid Bos Indicus	MODERN SPECIES	17	RAB26 (ENSBIXG00005029866) #8	PKD1 (ENSBIXG00005029892) #9	TSC2 (ENSBIXG00005030003) #10	ENSBIXG00005030106	NTHL1 (ENSBIXG00005030114) #11	NHERF2 (ENSBIXG00005030135) #12	ENSBIXG00005030154 #13	ZNF598 (ENSBIXG00005030165) #14	ENSBIXG00005030188 #15	ENSBIXG00005030201 #16	TBL3 (ENSBIXG00005030213) #18	NOXO1 (ENSBIXG00005030231) #17	RNF151 (ENSBIXG00005030248) #19	ENSBIXG00005030271 ##20	NDUFB10 (ENSBIXG00005030305) #21	RPL3L (ENSBIXG00005030313) #22	MSRB1 (ENSBIXG00005030323) #23	HS3ST6 (ENSBIXG00005005277) #24	ENSBIXG00005005270 #26	FAHD1 (ENSBIXG00005029225) #27	HAGH (ENSBIXG00005029215) #28	IGFALS (ENSBIXG00005001646) #29	EME2 (ENSBIXG00005029199) #32	SPSB3 (ENSBIXG00005001778) #31	ENSBIXG00005001802 #33	NME3 (ENSBIXG00005005200) #34	MAPK8IP3 (ENSBIXG00005029132) #35	ENSBIXG00005029057	JPT2 (ENSBIXG00005005130) #36	ENSBIXG00005029033	CRAMP1 (ENSBIXG00005029023)
Cow	MODERN SPECIES	17	CASKIN1 (ENSBTAG00000037945)	TRAF7 (ENSBTAG00000019073) #7	RAB26 (ENSBTAG00000000279) #8	TSC2 (ENSBTAG00000020617) #10	NTHL1 (ENSBTAG00000006272) #11	NHERF2 (ENSBTAG00000013479) #12	ENSBTAG00000054368 #13	ZNF598 (ENSBTAG00000001023) #14	SYNGR3 (ENSBTAG00000008504) #15	GFER (ENSBTAG00000017631) #16	NOXO1 (ENSBTAG00000020369) #17	TBL3 (ENSBTAG00000020366) #18	RNF151 (ENSBTAG00000009536) #19	RPS2 (ENSBTAG00000009535) ##20	NDUFB10 (ENSBTAG00000009534) #21	RPL3L (ENSBTAG00000009533) #22	MSRB1 (ENSBTAG00000049306) #23	HS3ST6 (ENSBTAG00000019249) #24	MEIOB (ENSBTAG00000020001) #26	FAHD1 (ENSBTAG00000033015) #27	HAGH (ENSBTAG00000019998) #28	IGFALS (ENSBTAG00000033299) #29	NUBP2 (ENSBTAG00000016561) #30	SPSB3 (ENSBTAG00000016558) #31	EME2 (ENSBTAG00000016553) #32	MRPS34 (ENSBTAG00000026415) #33	NME3 (ENSBTAG00000016552) #34	ENSBTAG00000052060	MAPK8IP3 (ENSBTAG00000002211) #35	JPT2 (ENSBTAG00000002209) #36	CRAMP1 (ENSBTAG00000002202)
Bos_a	ANCESTRAL SPECIES	13	ENSGT00940000172381	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000158204.b #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Wild yak	MODERN SPECIES	26									ENSBMUG00000017742	GFER (ENSBMUG00000017765) #16	NOXO1 (ENSBMUG00000017821) #17	TBL3 (ENSBMUG00000017851) #18	RNF151 (ENSBMUG00000017871) #19	ENSBMUG00000017908 ##20	NDUFB10 (ENSBMUG00000017948) #21	RPL3L (ENSBMUG00000017984) #22	MSRB1 (ENSBMUG00000018003) #23	HS3ST6 (ENSBMUG00000018022) #24	ENSBMUG00000018062 #26	FAHD1 (ENSBMUG00000018088) #27	HAGH (ENSBMUG00000018096) #28	IGFALS (ENSBMUG00000018107) #29	NUBP2 (ENSBMUG00000018133) #30	SPSB3 (ENSBMUG00000018145) #31	EME2 (ENSBMUG00000018170) #32	MRPS34 (ENSBMUG00000018185) #33	ENSBMUG00000018193 #34	MAPK8IP3 (ENSBMUG00000020161) #35	JPT2 (ENSBMUG00000021647) #36	CRAMP1 (ENSBMUG00000021918)	IFT140 (ENSBMUG00000022034)
Domestic yak	MODERN SPECIES	18	CASKIN1 (ENSBGRG00000020915)	TRAF7 (ENSBGRG00000021094) #7	RAB26 (ENSBGRG00000021201) #8	TSC2 (ENSBGRG00000021872) #10	ENSBGRG00000025853 #11	NHERF2 (ENSBGRG00000025867) #12	ENSBGRG00000025882 #13	ZNF598 (ENSBGRG00000025889) #14	SYNGR3 (ENSBGRG00000025907) #15	GFER (ENSBGRG00000025909) #16	NOXO1 (ENSBGRG00000025916) #17	TBL3 (ENSBGRG00000025925) #18	RNF151 (ENSBGRG00000025932) #19	ENSBGRG00000025950 ##20	NDUFB10 (ENSBGRG00000025973) #21	RPL3L (ENSBGRG00000026001) #22	MSRB1 (ENSBGRG00000026025) #23	HS3ST6 (ENSBGRG00000026037) #24	ENSBGRG00000026058 #26	FAHD1 (ENSBGRG00000026099) #27	HAGH (ENSBGRG00000026102) #28	IGFALS (ENSBGRG00000026120) #29	NUBP2 (ENSBGRG00000026125) #30	SPSB3 (ENSBGRG00000026135) #31	EME2 (ENSBGRG00000026143) #32	MRPS34 (ENSBGRG00000026152) #33	NME3 (ENSBGRG00000026159) #34	ENSBGRG00000026167 #35	JPT2 (ENSBGRG00000026177) #36	CRAMP1 (ENSBGRG00000026195)	ENSBGRG00000026261
American bison	MODERN SPECIES	1920									ZNF598 (ENSBBBG00000019611) #14	ENSBBBG00000019594 #15	ENSBBBG00000019585 #18	ENSBBBG00000019570	RNF151 (ENSBBBG00000005303) #19	ENSBBBG00000019558 ##20	NDUFB10 (ENSBBBG00000005291) #21	ENSBBBG00000019535 #22	MSRB1 (ENSBBBG00000009193) #23
Atlantogenata	ANCESTRAL SPECIES	32	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00940000153417.A
Xenarthra	ANCESTRAL SPECIES	177													ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160824 #29	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00390000007652.h #36	ENSGT00390000003337	ENSGT00940000153417.A	ENSGT00390000015528	ENSGT00390000006698
Armadillo	MODERN SPECIES	1647													RNF151 (ENSDNOG00000041949) #19	ENSDNOG00000042334 ##20	NDUFB10 (ENSDNOG00000003688) #21	RPL3L (ENSDNOG00000018455) #22	HS3ST6 (ENSDNOG00000001759) #24	ENSDNOG00000015418 #26	IGFALS (ENSDNOG00000049797) #29	FAHD1 (ENSDNOG00000031262) #27	HAGH (ENSDNOG00000038621) #28	NUBP2 (ENSDNOG00000043662) #30	ENSDNOG00000010374 #31	EME2 (ENSDNOG00000010348) #32	MRPS34 (ENSDNOG00000042503) #33	JPT2 (ENSDNOG00000030881) #36	ENSDNOG00000045712
Afrotheria	ANCESTRAL SPECIES	30	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000006698
Afrotheria_a	ANCESTRAL SPECIES	29	ENSGT00940000157022 #7	ENSGT00940000158558 #8	ENSGT00940000158702 #9	ENSGT00950000183139.C #10	ENSGT00510000047513 #11	ENSGT00950000182849.B.c.a #12	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #26	ENSGT00940000160452 #27	ENSGT00940000159176 #28	ENSGT00940000160824 #29	ENSGT00950000183193.A.c.b #30	ENSGT01030000234629.E.a.b #31	ENSGT00530000063937.b #32	ENSGT00390000008964 #33	ENSGT00940000161283 #34	ENSGT00940000153496.a.a #35	ENSGT00390000007652 #36	ENSGT00390000003337	ENSGT00390000006698
Hyrax	MODERN SPECIES	6996								ENSPCAG00000002388 #14	SYNGR3 (ENSPCAG00000002354) #15	GFER (ENSPCAG00000002339) #16	ENSPCAG00000002250 #17	TBL3 (ENSPCAG00000002157) #18	RNF151 (ENSPCAG00000002119) #19	RPS2 (ENSPCAG00000002090) #20	NDUFB10 (ENSPCAG00000002050) #21	RPL3L (ENSPCAG00000002019) #22	ENSPCAG00000001968 #23
Elephant	MODERN SPECIES	442	TRAF7 (ENSLAFG00000015455) #7	RAB26 (ENSLAFG00000021466) #8	PKD1 (ENSLAFG00000015438) #9	TSC2 (ENSLAFG00000015424) #10	NTHL1 (ENSLAFG00000015421) #11	NHERF2 (ENSLAFG00000004276) #12	ENSLAFG00000022592	ZNF598 (ENSLAFG00000026781) #14	SYNGR3 (ENSLAFG00000026399) #15	GFER (ENSLAFG00000028685) #16	ENSLAFG00000004707 #17	TBL3 (ENSLAFG00000004699) #18	RNF151 (ENSLAFG00000030860) #19	ENSLAFG00000004696 #20	NDUFB10 (ENSLAFG00000021643) #21	RPL3L (ENSLAFG00000016587) #22	ENSLAFG00000016584	HS3ST6 (ENSLAFG00000001051) #24	ENSLAFG00000008142 #26	FAHD1 (ENSLAFG00000008141) #27	HAGH (ENSLAFG00000032140) #28	SPSB3 (ENSLAFG00000028630) #31	ENSLAFG00000023334	MRPS34 (ENSLAFG00000022475) #33	MAPK8IP3 (ENSLAFG00000028194) #35	JPT2 (ENSLAFG00000016324) #36	CRAMP1 (ENSLAFG00000020604)	ENSLAFG00000003286	TMEM204 (ENSLAFG00000017196)	TELO2 (ENSLAFG00000003284)	PTX4 (ENSLAFG00000012669)
Tenrec	MODERN SPECIES	8295																RPL3L (ENSETEG00000016228) #22	ENSETEG00000016226 #23