Amniota	ANCESTRAL SPECIES	11	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a #20	ENSGT00390000006348 #21	ENSGT00940000153095.h ##20	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Mammalia	ANCESTRAL SPECIES	43	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a #20	ENSGT00390000006348 #21	ENSGT00940000153095.h ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Theria	ANCESTRAL SPECIES	10	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a #20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Eutheria	ANCESTRAL SPECIES	23	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Boreoeutheria	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Euarchontoglires	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Primates	ANCESTRAL SPECIES	11	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Haplorrhini	ANCESTRAL SPECIES	24	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Simiiformes	ANCESTRAL SPECIES	19	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452.m	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.b.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452.m	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	24	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452.m	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Homo/Pan group	ANCESTRAL SPECIES	23	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452.m	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Pan	ANCESTRAL SPECIES	28	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452.m	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Bonobo	MODERN SPECIES	7	MLST8 (ENSPPAG00000033345) #7	ENSPPAG00000028011 #8	TRAF7 (ENSPPAG00000035191) #9	ENSPPAG00000042887 #10	TSC2 (ENSPPAG00000033353) #11	NTHL1 (ENSPPAG00000003626) #12	NHERF2 (ENSPPAG00000029803) #13	ZNF598 (ENSPPAG00000043798) #14	ENSPPAG00000040928 #15	GFER (ENSPPAG00000019230) #16	ENSPPAG00000030899 #17	TBL3 (ENSPPAG00000041939) #18	RNF151 (ENSPPAG00000035993) #19	ENSPPAG00000028366 #20	NDUFB10 (ENSPPAG00000040038) #21	RPL3L (ENSPPAG00000039317) #22	ENSPPAG00000031640 #23	HS3ST6 (ENSPPAG00000029952) #24	ENSPPAG00000032337 #25	IGFALS (ENSPPAG00000025910) #26	ENSPPAG00000029613 #27	SPSB3 (ENSPPAG00000023101) #28	EME2 (ENSPPAG00000035754) #29	MRPS34 (ENSPPAG00000033749) #30	NME3 (ENSPPAG00000030073) #31	MAPK8IP3 (ENSPPAG00000034790) #32	JPT2 (ENSPPAG00000034952) #33	CRAMP1 (ENSPPAG00000036103) #34	TMEM204 (ENSPPAG00000033773) #35	IFT140 (ENSPPAG00000041233) #36	TELO2 (ENSPPAG00000031847) #37
Chimpanzee	MODERN SPECIES	7	TRAF7 (ENSPTRG00000007635) #9	RAB26 (ENSPTRG00000007634) #10	ENSPTRG00000050693	TSC2 (ENSPTRG00000031311) #11	NTHL1 (ENSPTRG00000007628) #12	NHERF2 (ENSPTRG00000007627) #13	NPW (ENSPTRG00000007626)	ZNF598 (ENSPTRG00000007625) #14	SYNGR3 (ENSPTRG00000007624) #15	GFER (ENSPTRG00000045515) #16	NOXO1 (ENSPTRG00000023021) #17	TBL3 (ENSPTRG00000007621) #18	RNF151 (ENSPTRG00000007620) #19	ENSPTRG00000052871 ##20	NDUFB10 (ENSPTRG00000007618) #21	RPL3L (ENSPTRG00000007617) #22	MSRB1 (ENSPTRG00000024355) #23	MEIOB (ENSPTRG00000007612) #25	FAHD1 (ENSPTRG00000046890)	HAGH (ENSPTRG00000007611)	IGFALS (ENSPTRG00000007610) #26	NUBP2 (ENSPTRG00000007609) #27	SPSB3 (ENSPTRG00000007608) #28	EME2 (ENSPTRG00000007607) #29	MRPS34 (ENSPTRG00000007606) #30	NME3 (ENSPTRG00000007605) #31	MAPK8IP3 (ENSPTRG00000007603) #32	JPT2 (ENSPTRG00000034459) #33	CRAMP1 (ENSPTRG00000007602) #34	TMEM204 (ENSPTRG00000031314) #35	IFT140 (ENSPTRG00000007600) #36
Human	MODERN SPECIES	7	TRAF7 (ENSG00000131653) #9	RAB26 (ENSG00000167964) #10	PKD1 (ENSG00000008710)	TSC2 (ENSG00000103197) #11	NTHL1 (ENSG00000065057) #12	NHERF2 (ENSG00000065054) #13	NPW (ENSG00000183971)	ZNF598 (ENSG00000167962) #14	SYNGR3 (ENSG00000127561)	GFER (ENSG00000127554) #16	NOXO1 (ENSG00000196408) #17	TBL3 (ENSG00000183751) #18	RNF151 (ENSG00000179580) #19	RPS2 (ENSG00000140988) ##20	NDUFB10 (ENSG00000140990) #21	RPL3L (ENSG00000140986) #22	MSRB1 (ENSG00000198736) #23	HS3ST6 (ENSG00000162040) #24	ENSG00000289722 #25	MEIOB (ENSG00000162039) #25	FAHD1 (ENSG00000180185)	HAGH (ENSG00000063854)	IGFALS (ENSG00000099769) #26	NUBP2 (ENSG00000095906) #27	SPSB3 (ENSG00000162032) #28	EME2 (ENSG00000197774) #29	MRPS34 (ENSG00000074071) #30	NME3 (ENSG00000103024) #31	MAPK8IP3 (ENSG00000138834) #32	JPT2 (ENSG00000206053) #33	CRAMP1 (ENSG00000007545) #34
Gorilla	MODERN SPECIES	7	TRAF7 (ENSGGOG00000022099) #9	RAB26 (ENSGGOG00000027074) #10	PKD1 (ENSGGOG00000007016)	ENSGGOG00000043551 #11	ENSGGOG00000027370 #11	NTHL1 (ENSGGOG00000023097) #12	ENSGGOG00000005919 #13	ENSGGOG00000008575	ZNF598 (ENSGGOG00000025660) #14	ENSGGOG00000007034	GFER (ENSGGOG00000006835) #16	ENSGGOG00000009392 #17	TBL3 (ENSGGOG00000009378) #18	RPS2 (ENSGGOG00000009371) ##20	NDUFB10 (ENSGGOG00000009367) #21	RPL3L (ENSGGOG00000009364) #22	ENSGGOG00000022794 #23	HS3ST6 (ENSGGOG00000009361) #24	ENSGGOG00000012261 #25	FAHD1 (ENSGGOG00000024697)	HAGH (ENSGGOG00000012252)	IGFALS (ENSGGOG00000006268) #26	NUBP2 (ENSGGOG00000006254) #27	SPSB3 (ENSGGOG00000006245) #28	EME2 (ENSGGOG00000006238) #29	MRPS34 (ENSGGOG00000006234) #30	NME3 (ENSGGOG00000006229) #31	MAPK8IP3 (ENSGGOG00000006208) #32	JPT2 (ENSGGOG00000006200) #33	CRAMP1 (ENSGGOG00000006181) #34	TMEM204 (ENSGGOG00000005903) #35
Orangutan	DUPLICATION
Orangutan	MODERN SPECIES	7	NTHL1 (ENSPPYG00000006985) #12	NHERF2 (ENSPPYG00000006984) #13	NPW (ENSPPYG00000006983)	ENSPPYG00000006981 #15	GFER (ENSPPYG00000006980) #16	ENSPPYG00000006978 #17	ZNF598 (ENSPPYG00000006982) #14	RNF151 (ENSPPYG00000036334) #19	ENSPPYG00000006975 ##20	ENSPPYG00000031680 #21	ENSPPYG00000006973 #22	ENSPPYG00000006972 #23	TBL3 (ENSPPYG00000006977) #18	ENSPPYG00000030067	NDUFB10 (ENSPPYG00000006974) #21	ENSPPYG00000029764 #22	MSRB1 (ENSPPYG00000041142) #23	HS3ST6 (ENSPPYG00000006971) #24	ENSPPYG00000006968 #25	FAHD1 (ENSPPYG00000037970)	HAGH (ENSPPYG00000006966)	IGFALS (ENSPPYG00000006965) #26	ENSPPYG00000006964 #27	SPSB3 (ENSPPYG00000006963) #28	EME2 (ENSPPYG00000035411) #29	MRPS34 (ENSPPYG00000006962) #30	NME3 (ENSPPYG00000032952) #31	MAPK8IP3 (ENSPPYG00000006960) #32	JPT2 (ENSPPYG00000006959) #33	CRAMP1 (ENSPPYG00000006958) #34	TMEM204 (ENSPPYG00000006957) #35
Orangutan	MODERN SPECIES	7	CASKIN1 (ENSPPYG00000006990) #8	TRAF7 (ENSPPYG00000006989) #9	RAB26 (ENSPPYG00000006988) #10	PKD1 (ENSPPYG00000006987)	TSC2 (ENSPPYG00000006986) #11	NTHL1 (ENSPPYG00000006985) #12	NHERF2 (ENSPPYG00000006984) #13	NPW (ENSPPYG00000006983)	ENSPPYG00000006981 #15	GFER (ENSPPYG00000006980) #16	ENSPPYG00000006978 #17	ZNF598 (ENSPPYG00000006982) #14	RNF151 (ENSPPYG00000036334) #19	ENSPPYG00000006975 ##20	ENSPPYG00000031680 #21	ENSPPYG00000006973 #22	ENSPPYG00000006972 #23	TBL3 (ENSPPYG00000006977) #18	ENSPPYG00000030067	NDUFB10 (ENSPPYG00000006974) #21	ENSPPYG00000029764 #22	MSRB1 (ENSPPYG00000041142) #23	HS3ST6 (ENSPPYG00000006971) #24	ENSPPYG00000006968 #25	FAHD1 (ENSPPYG00000037970)	HAGH (ENSPPYG00000006966)	IGFALS (ENSPPYG00000006965) #26	ENSPPYG00000006964 #27	SPSB3 (ENSPPYG00000006963) #28	EME2 (ENSPPYG00000035411) #29	MRPS34 (ENSPPYG00000006962) #30
Gibbon	MODERN SPECIES	8	MLST8 (ENSNLEG00000009208) #7	CASKIN1 (ENSNLEG00000009201) #8	TRAF7 (ENSNLEG00000009168) #9	RAB26 (ENSNLEG00000009155) #10	ENSNLEG00000027970	TSC2 (ENSNLEG00000009038) #11	NTHL1 (ENSNLEG00000009019) #12	ENSNLEG00000009011 #13	ZNF598 (ENSNLEG00000008983) #14	GFER (ENSNLEG00000008975) #16	NOXO1 (ENSNLEG00000008947) #17	TBL3 (ENSNLEG00000008889) #18	RNF151 (ENSNLEG00000008887) #19	RPS2 (ENSNLEG00000008877) ##20	NDUFB10 (ENSNLEG00000008867) #21	RPL3L (ENSNLEG00000008850) #22	ENSNLEG00000008834 #23	ENSNLEG00000008811 #25	FAHD1 (ENSNLEG00000008809)	ENSNLEG00000008791	ENSNLEG00000030061	NUBP2 (ENSNLEG00000008782) #27	SPSB3 (ENSNLEG00000031220) #28	EME2 (ENSNLEG00000008769) #29	MRPS34 (ENSNLEG00000008766) #30	NME3 (ENSNLEG00000008754) #31	MAPK8IP3 (ENSNLEG00000026706) #32	ENSNLEG00000029033	CRAMP1 (ENSNLEG00000008491) #34	IFT140 (ENSNLEG00000008705) #36	TMEM204 (ENSNLEG00000008742) #35
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Rhinopithecus	ANCESTRAL SPECIES	14	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Golden snub-nosed monkey	MODERN SPECIES	2643	TRAF7 (ENSRROG00000040970) #9	RAB26 (ENSRROG00000036356) #10	PKD1 (ENSRROG00000034084)	TSC2 (ENSRROG00000043138) #11	NTHL1 (ENSRROG00000038095) #12	NHERF2 (ENSRROG00000040635) #13	ENSRROG00000016296	ZNF598 (ENSRROG00000025953) #14	SYNGR3 (ENSRROG00000013898)	GFER (ENSRROG00000039639) #16	NOXO1 (ENSRROG00000031198) #17	TBL3 (ENSRROG00000026697) #18	RNF151 (ENSRROG00000035586) #19	RPS2 (ENSRROG00000035267) ##20	NDUFB10 (ENSRROG00000005315) #21	RPL3L (ENSRROG00000033620) #22	MSRB1 (ENSRROG00000017890) #23	HS3ST6 (ENSRROG00000045261) #24	ENSRROG00000023184 #25	FAHD1 (ENSRROG00000033003)	HAGH (ENSRROG00000032851)	IGFALS (ENSRROG00000042451) #26	NUBP2 (ENSRROG00000045209) #27	SPSB3 (ENSRROG00000044609) #28	EME2 (ENSRROG00000043980) #29	MRPS34 (ENSRROG00000028689) #30	ENSRROG00000035949 #31	MAPK8IP3 (ENSRROG00000045499) #32	JPT2 (ENSRROG00000025417) #33	CRAMP1 (ENSRROG00000043453) #34	TMEM204 (ENSRROG00000043665) #35
Black snub-nosed monkey	MODERN SPECIES	1929	TRAF7 (ENSRBIG00000028226) #9	RAB26 (ENSRBIG00000035237) #10	PKD1 (ENSRBIG00000014415)	TSC2 (ENSRBIG00000039722) #11	NTHL1 (ENSRBIG00000042577) #12	NHERF2 (ENSRBIG00000032177) #13	ENSRBIG00000028093	ZNF598 (ENSRBIG00000020769) #14	SYNGR3 (ENSRBIG00000042440)	GFER (ENSRBIG00000035198) #16	NOXO1 (ENSRBIG00000043548) #17	TBL3 (ENSRBIG00000032982) #18	RNF151 (ENSRBIG00000030571) #19	RPS2 (ENSRBIG00000036242) ##20	NDUFB10 (ENSRBIG00000044605) #21	RPL3L (ENSRBIG00000028920) #22	ENSRBIG00000044576 #23	HS3ST6 (ENSRBIG00000044265) #24	ENSRBIG00000030178 #25	HAGH (ENSRBIG00000034228)	IGFALS (ENSRBIG00000037270) #26	NUBP2 (ENSRBIG00000031416) #27	SPSB3 (ENSRBIG00000039428) #28	EME2 (ENSRBIG00000032429) #29	MRPS34 (ENSRBIG00000030707) #30	NME3 (ENSRBIG00000031631) #31	MAPK8IP3 (ENSRBIG00000044410) #32	JPT2 (ENSRBIG00000041459) #33	CRAMP1 (ENSRBIG00000031863) #34	TMEM204 (ENSRBIG00000033674) #35	IFT140 (ENSRBIG00000040322) #36
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Vervet Monkey	MODERN SPECIES	24	RAB26 (ENSCSAG00000010995) #10	PKD1 (ENSCSAG00000011023)	TSC2 (ENSCSAG00000011043) #11	NTHL1 (ENSCSAG00000011073) #12	NHERF2 (ENSCSAG00000011087) #13	NPW (ENSCSAG00000011095)	ZNF598 (ENSCSAG00000011129) #14	SYNGR3 (ENSCSAG00000011147)	GFER (ENSCSAG00000011153) #16	ENSCSAG00000018843	NOXO1 (ENSCSAG00000011176) #17	TBL3 (ENSCSAG00000011191) #18	RNF151 (ENSCSAG00000011197) #19	RPS2 (ENSCSAG00000011216) ##20	NDUFB10 (ENSCSAG00000011226) #21	RPL3L (ENSCSAG00000011232) #22	HS3ST6 (ENSCSAG00000011240) #24	ENSCSAG00000011268 #25	FAHD1 (ENSCSAG00000018842)	HAGH (ENSCSAG00000011337)	IGFALS (ENSCSAG00000011362) #26	NUBP2 (ENSCSAG00000011369) #27	SPSB3 (ENSCSAG00000011396) #28	EME2 (ENSCSAG00000011426) #29	MRPS34 (ENSCSAG00000011443) #30	NME3 (ENSCSAG00000011458) #31	MAPK8IP3 (ENSCSAG00000011484) #32	JPT2 (ENSCSAG00000011502) #33	CRAMP1 (ENSCSAG00000011519) #34	TMEM204 (ENSCSAG00000011531) #35	IFT140 (ENSCSAG00000011558) #36
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Olive baboon	MODERN SPECIES	9	MLST8 (ENSPANG00000018612) #7	TRAF7 (ENSPANG00000025049) #9	RAB26 (ENSPANG00000022245) #10	TSC2 (ENSPANG00000015710) #11	NTHL1 (ENSPANG00000016971) #12	NHERF2 (ENSPANG00000024976) #13	NPW (ENSPANG00000041068)	ZNF598 (ENSPANG00000024974) #14	ENSPANG00000030289 #15	ENSPANG00000046545 #16	NOXO1 (ENSPANG00000000513) #17	TBL3 (ENSPANG00000007024) #18	RNF151 (ENSPANG00000019234) #19	RPS2 (ENSPANG00000021004) ##20	NDUFB10 (ENSPANG00000008274) #21	RPL3L (ENSPANG00000011106) #22	ENSPANG00000029688 #23	HS3ST6 (ENSPANG00000007025) #24	ENSPANG00000034551 #25	FAHD1 (ENSPANG00000015411)	HAGH (ENSPANG00000000459)	IGFALS (ENSPANG00000005022) #26	NUBP2 (ENSPANG00000017597) #27	SPSB3 (ENSPANG00000018349) #28	EME2 (ENSPANG00000015752) #29	MRPS34 (ENSPANG00000020905) #30	NME3 (ENSPANG00000017598) #31	MAPK8IP3 (ENSPANG00000018354) #32	JPT2 (ENSPANG00000016521) #33	CRAMP1 (ENSPANG00000017496) #34	IFT140 (ENSPANG00000018206) #36
Cercopithecinae_d	ANCESTRAL SPECIES	65	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.b.a.b.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Drill	MODERN SPECIES	1516	CASKIN1 (ENSMLEG00000044209) #8	TRAF7 (ENSMLEG00000035655) #9	RAB26 (ENSMLEG00000025943) #10	PKD1 (ENSMLEG00000019007)	TSC2 (ENSMLEG00000038963) #11	NTHL1 (ENSMLEG00000030400) #12	NHERF2 (ENSMLEG00000032076) #13	ENSMLEG00000036754	ZNF598 (ENSMLEG00000029364) #14	GFER (ENSMLEG00000015681) #16	NOXO1 (ENSMLEG00000031943) #17	TBL3 (ENSMLEG00000043359) #18	ENSMLEG00000030812	ENSMLEG00000038670	NDUFB10 (ENSMLEG00000021536) #21	RPL3L (ENSMLEG00000032414) #22	ENSMLEG00000043698 #23	HS3ST6 (ENSMLEG00000026210) #24	ENSMLEG00000035652 #25	FAHD1 (ENSMLEG00000026819)	HAGH (ENSMLEG00000042252)	IGFALS (ENSMLEG00000040910) #26	NUBP2 (ENSMLEG00000028983) #27	SPSB3 (ENSMLEG00000032836) #28	EME2 (ENSMLEG00000044276) #29	MRPS34 (ENSMLEG00000028354) #30	ENSMLEG00000038547 #31	MAPK8IP3 (ENSMLEG00000034940) #32	JPT2 (ENSMLEG00000030463) #33	CRAMP1 (ENSMLEG00000040080) #34	TMEM204 (ENSMLEG00000040932) #35
Sooty mangabey	MODERN SPECIES	104	CASKIN1 (ENSCATG00000043453) #8	TRAF7 (ENSCATG00000035820) #9	RAB26 (ENSCATG00000039917) #10	PKD1 (ENSCATG00000032827)	TSC2 (ENSCATG00000037504) #11	NTHL1 (ENSCATG00000040433) #12	NHERF2 (ENSCATG00000015633) #13	ENSCATG00000033752	ZNF598 (ENSCATG00000038825) #14	ENSCATG00000034941 #15	TBL3 (ENSCATG00000031298) #18	NOXO1 (ENSCATG00000040569) #17	RNF151 (ENSCATG00000029626) #19	ENSCATG00000040770 ##20	NDUFB10 (ENSCATG00000020227) #21	RPL3L (ENSCATG00000043808) #22	ENSCATG00000045189 #23	HS3ST6 (ENSCATG00000044878) #24	ENSCATG00000013960 #25	FAHD1 (ENSCATG00000024626)	HAGH (ENSCATG00000031808)	IGFALS (ENSCATG00000038603) #26	NUBP2 (ENSCATG00000032660) #27	SPSB3 (ENSCATG00000014492) #28	EME2 (ENSCATG00000034726) #29	MRPS34 (ENSCATG00000017392) #30	NME3 (ENSCATG00000031446) #31	MAPK8IP3 (ENSCATG00000037988) #32	JPT2 (ENSCATG00000039325) #33	CRAMP1 (ENSCATG00000039680) #34	IFT140 (ENSCATG00000035856) #36
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Pig-tailed macaque	MODERN SPECIES	124	TRAF7 (ENSMNEG00000037325) #9	RAB26 (ENSMNEG00000034256) #10	PKD1 (ENSMNEG00000043046)	TSC2 (ENSMNEG00000044090) #11	NTHL1 (ENSMNEG00000039538) #12	NHERF2 (ENSMNEG00000044289) #13	NPW (ENSMNEG00000039297)	ZNF598 (ENSMNEG00000042621) #14	ENSMNEG00000038105 #15	GFER (ENSMNEG00000044314) #16	TBL3 (ENSMNEG00000032603) #18	NOXO1 (ENSMNEG00000038172) #17	RNF151 (ENSMNEG00000029972) #19	ENSMNEG00000031742	NDUFB10 (ENSMNEG00000004959) #21	RPL3L (ENSMNEG00000029185) #22	ENSMNEG00000041015 #23	HS3ST6 (ENSMNEG00000040903) #24	ENSMNEG00000004327 #25	FAHD1 (ENSMNEG00000042967)	HAGH (ENSMNEG00000044613)	IGFALS (ENSMNEG00000032413) #26	NUBP2 (ENSMNEG00000042575) #27	SPSB3 (ENSMNEG00000043847) #28	EME2 (ENSMNEG00000028998) #29	MRPS34 (ENSMNEG00000040928) #30	NME3 (ENSMNEG00000016858) #31	MAPK8IP3 (ENSMNEG00000034470) #32	JPT2 (ENSMNEG00000034006) #33	CRAMP1 (ENSMNEG00000032283) #34	IFT140 (ENSMNEG00000001208) #36
Macaca_a	ANCESTRAL SPECIES	25	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Crab-eating macaque	MODERN SPECIES	12	BRICD5 (ENSMFAG00000039405)	MLST8 (ENSMFAG00000045584) #7	TRAF7 (ENSMFAG00000045280) #9	RAB26 (ENSMFAG00000045162) #10	TSC2 (ENSMFAG00000032166) #11	NTHL1 (ENSMFAG00000032174) #12	NHERF2 (ENSMFAG00000044443) #13	ZNF598 (ENSMFAG00000001763) #14	ENSMFAG00000038081 #15	GFER (ENSMFAG00000039787) #16	NOXO1 (ENSMFAG00000037791) #17	TBL3 (ENSMFAG00000030302) #18	RNF151 (ENSMFAG00000035160) #19	ENSMFAG00000002939 #20	NDUFB10 (ENSMFAG00000000484) #21	RPL3L (ENSMFAG00000039775) #22	HS3ST6 (ENSMFAG00000054823) #24	ENSMFAG00000054955	ENSMFAG00000000726 #25	FAHD1 (ENSMFAG00000037024)	HAGH (ENSMFAG00000004030)	IGFALS (ENSMFAG00000042039) #26	SPSB3 (ENSMFAG00000031888) #28	NUBP2 (ENSMFAG00000037059) #27	EME2 (ENSMFAG00000026250) #29	MRPS34 (ENSMFAG00000046146) #30	MAPK8IP3 (ENSMFAG00000037276) #32	ENSMFAG00000060156	JPT2 (ENSMFAG00000033861) #33	CRAMP1 (ENSMFAG00000002985) #34	TMEM204 (ENSMFAG00000032333) #35
Rhesus	MODERN SPECIES	12	TRAF7 (ENSMMUG00000019223) #9	RAB26 (ENSMMUG00000002843) #10	PKD1 (ENSMMUG00000029263)	TSC2 (ENSMMUG00000002808) #11	NTHL1 (ENSMMUG00000002807) #12	NHERF2 (ENSMMUG00000002806) #13	NPW (ENSMMUG00000020017)	ZNF598 (ENSMMUG00000029265) #14	SYNGR3 (ENSMMUG00000007960)	GFER (ENSMMUG00000052399) #16	NOXO1 (ENSMMUG00000007953) #17	TBL3 (ENSMMUG00000007943) #18	RNF151 (ENSMMUG00000062548) #19	RPS2 (ENSMMUG00000029267) ##20	NDUFB10 (ENSMMUG00000057370) #21	RPL3L (ENSMMUG00000007937) #22	MSRB1 (ENSMMUG00000007936) #23	HS3ST6 (ENSMMUG00000063633) #24	ENSMMUG00000055452	MEIOB (ENSMMUG00000000739) #25	FAHD1 (ENSMMUG00000000738)	HAGH (ENSMMUG00000000737)	IGFALS (ENSMMUG00000018598) #26	NUBP2 (ENSMMUG00000018597) #27	SPSB3 (ENSMMUG00000060350) #28	EME2 (ENSMMUG00000060835) #29	MRPS34 (ENSMMUG00000018594) #30	NME3 (ENSMMUG00000003857) #31	MAPK8IP3 (ENSMMUG00000017496) #32	JPT2 (ENSMMUG00000000979) #33	ENSMMUG00000059063
Platyrrhini	ANCESTRAL SPECIES	32	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00970000197210	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427
Cebidae	ANCESTRAL SPECIES	16	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00970000197210	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427
Marmoset	MODERN SPECIES	3	MLST8 (ENSCJAG00000015030) #7	CASKIN1 (ENSCJAG00000015039) #8	TRAF7 (ENSCJAG00000015047) #9	RAB26 (ENSCJAG00000015059) #10	NTHL1 (ENSCJAG00000015178) #12	NHERF2 (ENSCJAG00000015182) #13	NPW (ENSCJAG00000039358)	ZNF598 (ENSCJAG00000015194) #14	ENSCJAG00000039827 #15	GFER (ENSCJAG00000045500) #16	NOXO1 (ENSCJAG00000015221) #17	TBL3 (ENSCJAG00000015245) #18	RNF151 (ENSCJAG00000015265) #19	ENSCJAG00000015267 ##20	NDUFB10 (ENSCJAG00000047303) #21	RPL3L (ENSCJAG00000031300) #22	MSRB1 (ENSCJAG00000046785) #23	HS3ST6 (ENSCJAG00000038529) #24	PRSS22 (ENSCJAG00000034598)	ENSCJAG00000015315	ENSCJAG00000038414	PRSS21 (ENSCJAG00000044190)	ENSCJAG00000015323	PRSS33 (ENSCJAG00000015343)	ELOB (ENSCJAG00000015347)	SRRM2 (ENSCJAG00000015354)	ENSCJAG00000070318	FLYWCH2 (ENSCJAG00000047776)	FLYWCH1 (ENSCJAG00000081999)	ENSCJAG00000015380	KREMEN2 (ENSCJAG00000015398)
Cebidae_a	ANCESTRAL SPECIES	15	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00910000146999 #15	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000164567.h	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00940000160305	ENSGT00940000163143	ENSGT00940000155138.e.a	ENSGT00940000155138.e.b	ENSGT00940000162519	ENSGT00390000018316.b.a.a.a.b	ENSGT00940000161127	ENSGT00530000064166.b	ENSGT00530000064166.a	ENSGT00940000162126	ENSGT00940000157978	ENSGT00940000159427	ENSGT00730000111940
Capuchin	MODERN SPECIES	444	TRAF7 (ENSCCAG00000032534) #9	RAB26 (ENSCCAG00000033082) #10	PKD1 (ENSCCAG00000038035)	TSC2 (ENSCCAG00000036456) #11	NTHL1 (ENSCCAG00000022274) #12	SLC9A3R2 (ENSCCAG00000033482) #13	NPW (ENSCCAG00000030311)	ZNF598 (ENSCCAG00000018310) #14	ENSCCAG00000028959 #15	GFER (ENSCCAG00000012276) #16	TBL3 (ENSCCAG00000034486) #18	NOXO1 (ENSCCAG00000012794) #17	RNF151 (ENSCCAG00000026159) #19	ENSCCAG00000026811	NDUFB10 (ENSCCAG00000024399) #21	RPL3L (ENSCCAG00000028194) #22	ENSCCAG00000037720 #23	HS3ST6 (ENSCCAG00000005829) #24	PRSS22 (ENSCCAG00000023671)	ZG16B (ENSCCAG00000011182)	PRSS21 (ENSCCAG00000029304)	PRSS41 (ENSCCAG00000022189)	PRSS33 (ENSCCAG00000033310)	ELOB (ENSCCAG00000008353)	SRRM2 (ENSCCAG00000031601)	FLYWCH2 (ENSCCAG00000025623)	FLYWCH1 (ENSCCAG00000017112)	KREMEN2 (ENSCCAG00000023928)	PKMYT1 (ENSCCAG00000036161)	PAQR4 (ENSCCAG00000007894)	CLDN9 (ENSCCAG00000001076)
Bolivian squirrel monkey	MODERN SPECIES	71	TRAF7 (ENSSBOG00000007977) #9	RAB26 (ENSSBOG00000004636) #10	PKD1 (ENSSBOG00000027670)	TSC2 (ENSSBOG00000003087) #11	NTHL1 (ENSSBOG00000025341) #12	NHERF2 (ENSSBOG00000028364) #13	NPW (ENSSBOG00000034700)	ZNF598 (ENSSBOG00000028788) #14	ENSSBOG00000030962 #15	GFER (ENSSBOG00000034588) #16	NOXO1 (ENSSBOG00000031376) #17	TBL3 (ENSSBOG00000013923) #18	RNF151 (ENSSBOG00000018174) #19	ENSSBOG00000025337	NDUFB10 (ENSSBOG00000031198) #21	RPL3L (ENSSBOG00000026845) #22	MSRB1 (ENSSBOG00000029381) #23	PRSS22 (ENSSBOG00000034101)	ZG16B (ENSSBOG00000026570)	PRSS21 (ENSSBOG00000004112)	PRSS41 (ENSSBOG00000015646)	PRSS33 (ENSSBOG00000020955)	ENSSBOG00000022693	SRRM2 (ENSSBOG00000024771)	ENSSBOG00000024588	FLYWCH2 (ENSSBOG00000033478)	FLYWCH1 (ENSSBOG00000024241)	KREMEN2 (ENSSBOG00000022317)	PKMYT1 (ENSSBOG00000022064)	PAQR4 (ENSSBOG00000031731)	GREP1 (ENSSBOG00000005560)
Mas night monkey	MODERN SPECIES	1162	RAB26 (ENSANAG00000027265) #10	ENSANAG00000019882	PKD1 (ENSANAG00000024591)	TSC2 (ENSANAG00000023148) #11	NTHL1 (ENSANAG00000033224) #12	NHERF2 (ENSANAG00000030277) #13	NPW (ENSANAG00000026821)	ZNF598 (ENSANAG00000026209) #14	ENSANAG00000034896 #15	GFER (ENSANAG00000034502) #16	NOXO1 (ENSANAG00000034027) #17	TBL3 (ENSANAG00000030472) #18	RNF151 (ENSANAG00000026490) #19	ENSANAG00000022295 ##20	NDUFB10 (ENSANAG00000020686) #21	RPL3L (ENSANAG00000019116) #22	MSRB1 (ENSANAG00000036834) #23	HS3ST6 (ENSANAG00000019609) #24	PRSS22 (ENSANAG00000022238)	ENSANAG00000021677	PRSS21 (ENSANAG00000021600)	ENSANAG00000021499	PRSS33 (ENSANAG00000021133)	ELOB (ENSANAG00000017599)	SRRM2 (ENSANAG00000034911)	FLYWCH2 (ENSANAG00000034418)	FLYWCH1 (ENSANAG00000033837)	KREMEN2 (ENSANAG00000032213)	PAQR4 (ENSANAG00000031007)	PKMYT1 (ENSANAG00000029282)	ENSANAG00000028176
Tarsier	MODERN SPECIES	1902						TSC2 (ENSTSYG00000025779) #11	NTHL1 (ENSTSYG00000035337) #12	SLC9A3R2 (ENSTSYG00000027539) #13	ZNF598 (ENSTSYG00000032996) #14	GFER (ENSTSYG00000029430) #16	NOXO1 (ENSTSYG00000028783) #17	TBL3 (ENSTSYG00000036142) #18	RNF151 (ENSTSYG00000001876) #19	RPS2 (ENSTSYG00000013466) ##20	NDUFB10 (ENSTSYG00000013475) #21	RPL3L (ENSTSYG00000036590) #22
Strepsirrhini	ANCESTRAL SPECIES	24	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Bushbaby	MODERN SPECIES	159	MLST8 (ENSOGAG00000033928) #7	CASKIN1 (ENSOGAG00000034517) #8	TRAF7 (ENSOGAG00000006581) #9	RAB26 (ENSOGAG00000033648) #10	PKD1 (ENSOGAG00000016616)	TSC2 (ENSOGAG00000016605) #11	NTHL1 (ENSOGAG00000016602) #12	NHERF2 (ENSOGAG00000027256) #13	ZNF598 (ENSOGAG00000008022) #14	SYNGR3 (ENSOGAG00000028210)	GFER (ENSOGAG00000016907) #16	NOXO1 (ENSOGAG00000010110) #17	TBL3 (ENSOGAG00000010104) #18	RPS2 (ENSOGAG00000010098) ##20	NDUFB10 (ENSOGAG00000010094) #21	RPL3L (ENSOGAG00000010087) #22	HS3ST6 (ENSOGAG00000010083) #24	FAHD1 (ENSOGAG00000012662)	HAGH (ENSOGAG00000012660)	IGFALS (ENSOGAG00000012659) #26	NUBP2 (ENSOGAG00000012655) #27	SPSB3 (ENSOGAG00000027372) #28	EME2 (ENSOGAG00000012649) #29	MRPS34 (ENSOGAG00000012647) #30	NME3 (ENSOGAG00000026071) #31	MAPK8IP3 (ENSOGAG00000012639) #32	CRAMP1 (ENSOGAG00000001253) #34	TMEM204 (ENSOGAG00000001249) #35	JPT2 (ENSOGAG00000012638) #33	IFT140 (ENSOGAG00000001245) #36	TELO2 (ENSOGAG00000004371) #37
Lemuriformes	ANCESTRAL SPECIES	27	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Mouse lemur	MODERN SPECIES	8	TRAF7 (ENSMICG00000005860) #9	RAB26 (ENSMICG00000027380) #10	PKD1 (ENSMICG00000005834)	TSC2 (ENSMICG00000005800) #11	NTHL1 (ENSMICG00000035043) #12	NHERF2 (ENSMICG00000015931) #13	NPW (ENSMICG00000034106)	ZNF598 (ENSMICG00000012834) #14	SYNGR3 (ENSMICG00000031975)	GFER (ENSMICG00000027083) #16	NOXO1 (ENSMICG00000012809) #17	TBL3 (ENSMICG00000012787) #18	RNF151 (ENSMICG00000012775) #19	ENSMICG00000012765 ##20	NDUFB10 (ENSMICG00000027466) #21	RPL3L (ENSMICG00000012746) #22	MSRB1 (ENSMICG00000011349) #23	HS3ST6 (ENSMICG00000011342) #24	ENSMICG00000037918	ENSMICG00000011322 #25	FAHD1 (ENSMICG00000002137)	HAGH (ENSMICG00000002132)	IGFALS (ENSMICG00000002129) #26	NUBP2 (ENSMICG00000002126) #27	SPSB3 (ENSMICG00000002122) #28	MRPS34 (ENSMICG00000031095) #30	NME3 (ENSMICG00000030545) #31	MAPK8IP3 (ENSMICG00000002091) #32	JPT2 (ENSMICG00000026714) #33	CRAMP1 (ENSMICG00000014094) #34	TMEM204 (ENSMICG00000042845) #35
Lemuriformes_a	ANCESTRAL SPECIES	23	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b.a.a.a.a.a.a ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652.i #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Coquerels sifaka	MODERN SPECIES	384	TRAF7 (ENSPCOG00000013195) #9	RAB26 (ENSPCOG00000013209) #10	PKD1 (ENSPCOG00000010798)	TSC2 (ENSPCOG00000019871) #11	NTHL1 (ENSPCOG00000019236) #12	NHERF2 (ENSPCOG00000004586) #13	NPW (ENSPCOG00000010961)	ZNF598 (ENSPCOG00000021012) #14	SYNGR3 (ENSPCOG00000021755)	GFER (ENSPCOG00000014504) #16	NOXO1 (ENSPCOG00000025960) #17	TBL3 (ENSPCOG00000019749) #18	RNF151 (ENSPCOG00000015191) #19	ENSPCOG00000028664 ##20	NDUFB10 (ENSPCOG00000022126) #21	RPL3L (ENSPCOG00000014695) #22	MSRB1 (ENSPCOG00000027095) #23	HS3ST6 (ENSPCOG00000027953) #24	ENSPCOG00000002540 #25	FAHD1 (ENSPCOG00000007621)	HAGH (ENSPCOG00000026794)	IGFALS (ENSPCOG00000012687) #26	NUBP2 (ENSPCOG00000018600) #27	SPSB3 (ENSPCOG00000015385) #28	EME2 (ENSPCOG00000021099) #29	MRPS34 (ENSPCOG00000026798) #30	NME3 (ENSPCOG00000019193) #31	MAPK8IP3 (ENSPCOG00000021523) #32	ENSPCOG00000028105 #33	CRAMP1 (ENSPCOG00000004847) #34	TMEM204 (ENSPCOG00000027514) #35
Greater bamboo lemur	MODERN SPECIES	390	CASKIN1 (ENSPSMG00000022966) #8	TRAF7 (ENSPSMG00000023025) #9	RAB26 (ENSPSMG00000023082) #10	TSC2 (ENSPSMG00000023695) #11	NTHL1 (ENSPSMG00000024110) #12	NHERF2 (ENSPSMG00000024127) #13	NPW (ENSPSMG00000024133)	ZNF598 (ENSPSMG00000024145) #14	SYNGR3 (ENSPSMG00000024155)	GFER (ENSPSMG00000024165) #16	NOXO1 (ENSPSMG00000024168) #17	ENSPSMG00000024173	ENSPSMG00000024178 #19	RPS2 (ENSPSMG00000024201) ##20	NDUFB10 (ENSPSMG00000024222) #21	RPL3L (ENSPSMG00000024237) #22	MSRB1 (ENSPSMG00000024244) #23	HS3ST6 (ENSPSMG00000024249) #24	ENSPSMG00000024257	ENSPSMG00000024276 #25	FAHD1 (ENSPSMG00000024285)	HAGH (ENSPSMG00000024311)	ENSPSMG00000024318	IGFALS (ENSPSMG00000024321) #26	NUBP2 (ENSPSMG00000024328) #27	SPSB3 (ENSPSMG00000024361) #28	EME2 (ENSPSMG00000024369) #29	MRPS34 (ENSPSMG00000024379) #30	NME3 (ENSPSMG00000024387) #31	MAPK8IP3 (ENSPSMG00000024595) #32	JPT2 (ENSPSMG00000024685) #33
Euarchontoglires_A	ANCESTRAL SPECIES	12	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Glires	ANCESTRAL SPECIES	11	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Lagomorpha	ANCESTRAL SPECIES	313																ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27
Pika	MODERN SPECIES	1702																RPL3L (ENSOPRG00000007029) #22
Rabbit	MODERN SPECIES	987																RPL3L (ENSOCUG00000016283) #22	MSRB1 (ENSOCUG00000022831) #23	HS3ST6 (ENSOCUG00000039128) #24	ENSOCUG00000005997 #25	ENSOCUG00000024657
Rodentia	ANCESTRAL SPECIES	11	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Rodentia_A	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Sciuridae	ANCESTRAL SPECIES	9	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Marmotini	ANCESTRAL SPECIES	3	ENSGT00940000157022.h #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Alpin marmot	MODERN SPECIES	28	MLST8 (ENSMMMG00000009615) #7	TRAF7 (ENSMMMG00000009664) #9	RAB26 (ENSMMMG00000009776) #10	ENSMMMG00000009812	TSC2 (ENSMMMG00000009837) #11	NTHL1 (ENSMMMG00000010821) #12	NHERF2 (ENSMMMG00000010827) #13	ENSMMMG00000010835	ZNF598 (ENSMMMG00000010846) #14	SYNGR3 (ENSMMMG00000010863)	GFER (ENSMMMG00000010878) #16	NOXO1 (ENSMMMG00000010886) #17	RNF151 (ENSMMMG00000010935) #19	RPS2 (ENSMMMG00000010948) ##20	NDUFB10 (ENSMMMG00000010988) #21	RPL3L (ENSMMMG00000011010) #22	MSRB1 (ENSMMMG00000011047) #23	HS3ST6 (ENSMMMG00000011071) #24	ENSMMMG00000011082 #25	FAHD1 (ENSMMMG00000011106)	HAGH (ENSMMMG00000011110)	IGFALS (ENSMMMG00000011124) #26	NUBP2 (ENSMMMG00000011128) #27	SPSB3 (ENSMMMG00000011143) #28	EME2 (ENSMMMG00000011151) #29	MRPS34 (ENSMMMG00000011168) #30	MAPK8IP3 (ENSMMMG00000011208) #32	JPT2 (ENSMMMG00000015507) #33	CRAMP1 (ENSMMMG00000015511) #34	IFT140 (ENSMMMG00000015580) #36	TMEM204 (ENSMMMG00000015619) #35
Marmotini_b	ANCESTRAL SPECIES	1	ENSGT00940000157022.h #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Squirrel	MODERN SPECIES	294	ENSSTOG00000013083 #9	RAB26 (ENSSTOG00000013081) #10	PKD1 (ENSSTOG00000013048)	TSC2 (ENSSTOG00000013014) #11	NTHL1 (ENSSTOG00000013011) #12	NHERF2 (ENSSTOG00000013004) #13	ENSSTOG00000022004	ZNF598 (ENSSTOG00000012994) #14	SYNGR3 (ENSSTOG00000012987)	GFER (ENSSTOG00000023807) #16	NOXO1 (ENSSTOG00000023430) #17	TBL3 (ENSSTOG00000012964) #18	ENSSTOG00000023350 #19	ENSSTOG00000012944 ##20	NDUFB10 (ENSSTOG00000012938) #21	RPL3L (ENSSTOG00000012921) #22	MSRB1 (ENSSTOG00000034478) #23	HS3ST6 (ENSSTOG00000012919) #24	ENSSTOG00000020433 #25	HAGH (ENSSTOG00000009109)	IGFALS (ENSSTOG00000027057) #26	NUBP2 (ENSSTOG00000026670) #27	SPSB3 (ENSSTOG00000021171) #28	EME2 (ENSSTOG00000000961) #29	MRPS34 (ENSSTOG00000021586) #30	NME3 (ENSSTOG00000028986) #31	MAPK8IP3 (ENSSTOG00000003734) #32	JPT2 (ENSSTOG00000003729) #33	ENSSTOG00000025346	CRAMP1 (ENSSTOG00000003675) #34	IFT140 (ENSSTOG00000003636) #36
Arctic ground squirrel	MODERN SPECIES	37	ENSUPAG00010017594 #9	RAB26 (ENSUPAG00010017565) #10	ENSUPAG00010017562	TSC2 (ENSUPAG00010017065) #11	NTHL1 (ENSUPAG00010017055) #12	NHERF2 (ENSUPAG00010017024) #13	ENSUPAG00010017018	ZNF598 (ENSUPAG00010016990) #14	SYNGR3 (ENSUPAG00010016982)	GFER (ENSUPAG00010016968) #16	NOXO1 (ENSUPAG00010016951) #17	TBL3 (ENSUPAG00010016941) #18	RNF151 (ENSUPAG00010016927) #19	RPS2 (ENSUPAG00010016573) ##20	NDUFB10 (ENSUPAG00010016562) #21	RPL3L (ENSUPAG00010016544) #22	MSRB1 (ENSUPAG00010016532) #23	HS3ST6 (ENSUPAG00010016522) #24	ENSUPAG00010016481 #25	FAHD1 (ENSUPAG00010016476)	HAGH (ENSUPAG00010016451)	ENSUPAG00010016447 #26	NUBP2 (ENSUPAG00010016409) #27	SPSB3 (ENSUPAG00010016383) #28	EME2 (ENSUPAG00010016365) #29	ENSUPAG00010016348 #30	NME3 (ENSUPAG00010016324) #31	MAPK8IP3 (ENSUPAG00010015185) #32	JPT2 (ENSUPAG00010015162) #33	CRAMP1 (ENSUPAG00010015084) #34	TMEM204 (ENSUPAG00010015069) #35
Eurasian red squirrel	MODERN SPECIES	9	MLST8 (ENSSVLG00005023671) #7	CASKIN1 (ENSSVLG00005023622) #8	ENSSVLG00005023558 #9	RAB26 (ENSSVLG00005023508) #10	TSC2 (ENSSVLG00005020810) #11	NTHL1 (ENSSVLG00005020622) #12	NHERF2 (ENSSVLG00005020506) #13	ENSSVLG00005020465	ZNF598 (ENSSVLG00005020435) #14	SYNGR3 (ENSSVLG00005020383)	GFER (ENSSVLG00005020336) #16	NOXO1 (ENSSVLG00005020093) #17	RNF151 (ENSSVLG00005019772) #19	ENSSVLG00005019653 ##20	NDUFB10 (ENSSVLG00005019544) #21	RPL3L (ENSSVLG00005019463) #22	MSRB1 (ENSSVLG00005019321) #23	HS3ST6 (ENSSVLG00005019256) #24	ENSSVLG00005019191 #25	ENSSVLG00005019134	HAGH (ENSSVLG00005018908)	IGFALS (ENSSVLG00005018848) #26	NUBP2 (ENSSVLG00005018731) #27	EME2 (ENSSVLG00005018557) #29	MRPS34 (ENSSVLG00005018518) #30	NME3 (ENSSVLG00005018434) #31	MAPK8IP3 (ENSSVLG00005018319) #32	JPT2 (ENSSVLG00005018232) #33	CRAMP1 (ENSSVLG00005018001) #34	TMEM204 (ENSSVLG00005017964) #35	IFT140 (ENSSVLG00005017909) #36
Hystricomorpha	ANCESTRAL SPECIES		ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348.m #21	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Hystricomorpha_a	ANCESTRAL SPECIES	2	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Guinea pig	MODERN SPECIES	4	CASKIN1 (ENSCPOG00000011848) #8	TRAF7 (ENSCPOG00000011840) #9	RAB26 (ENSCPOG00000025075) #10	PKD1 (ENSCPOG00000003228)	TSC2 (ENSCPOG00000003217) #11	NTHL1 (ENSCPOG00000003211) #12	NHERF2 (ENSCPOG00000026861) #13	ZNF598 (ENSCPOG00000004958) #14	SYNGR3 (ENSCPOG00000035707)	GFER (ENSCPOG00000011642) #16	NOXO1 (ENSCPOG00000019858) #17	TBL3 (ENSCPOG00000005998) #18	RNF151 (ENSCPOG00000011654) #19	ENSCPOG00000011651 ##20	NDUFB10 (ENSCPOG00000038375) #21	RPL3L (ENSCPOG00000011631) #22	MSRB1 (ENSCPOG00000011627) #23	HS3ST6 (ENSCPOG00000014346) #24	ENSCPOG00000001543 #25	HAGH (ENSCPOG00000024438)	IGFALS (ENSCPOG00000033322) #26	NUBP2 (ENSCPOG00000008071) #27	SPSB3 (ENSCPOG00000026170) #28	EME2 (ENSCPOG00000032066) #29	MRPS34 (ENSCPOG00000005379) #30	NME3 (ENSCPOG00000035161) #31	MAPK8IP3 (ENSCPOG00000005354) #32	JPT2 (ENSCPOG00000032923) #33	CRAMP1 (ENSCPOG00000005336) #34	TMEM204 (ENSCPOG00000030328) #35	IFT140 (ENSCPOG00000003314) #36
Hystricomorpha_b	ANCESTRAL SPECIES	1	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.b.h ##20	ENSGT00390000006348.n #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Long-tailed chinchilla	MODERN SPECIES	149	RAB26 (ENSCLAG00000016173) #10	PKD1 (ENSCLAG00000013843)	TSC2 (ENSCLAG00000013345) #11	NTHL1 (ENSCLAG00000011819) #12	NHERF2 (ENSCLAG00000013193) #13	NPW (ENSCLAG00000014103)	ZNF598 (ENSCLAG00000012014) #14	SYNGR3 (ENSCLAG00000014459)	GFER (ENSCLAG00000013056) #16	NOXO1 (ENSCLAG00000012905) #17	TBL3 (ENSCLAG00000013342) #18	RNF151 (ENSCLAG00000014779) #19	ENSCLAG00000016080 ##20	NDUFB10 (ENSCLAG00000013856) #21	ENSCLAG00000016182	RPL3L (ENSCLAG00000015614) #22	MSRB1 (ENSCLAG00000016348) #23	HS3ST6 (ENSCLAG00000011879) #24	ENSCLAG00000012822 #25	HAGH (ENSCLAG00000013689)	IGFALS (ENSCLAG00000014739) #26	NUBP2 (ENSCLAG00000015595) #27	SPSB3 (ENSCLAG00000013801) #28	EME2 (ENSCLAG00000015876) #29	MRPS34 (ENSCLAG00000015224) #30	NME3 (ENSCLAG00000015018) #31	MAPK8IP3 (ENSCLAG00000014643) #32	JPT2 (ENSCLAG00000014793) #33	CRAMP1 (ENSCLAG00000013881) #34	IFT140 (ENSCLAG00000013535) #36	TMEM204 (ENSCLAG00000015782) #35
Degu	MODERN SPECIES	62	CASKIN1 (ENSODEG00000013245) #8	TRAF7 (ENSODEG00000013446) #9	RAB26 (ENSODEG00000015360) #10	PKD1 (ENSODEG00000015073)	TSC2 (ENSODEG00000013876) #11	NTHL1 (ENSODEG00000014067) #12	NHERF2 (ENSODEG00000013896) #13	ENSODEG00000015297	ZNF598 (ENSODEG00000014650) #14	SYNGR3 (ENSODEG00000014513)	GFER (ENSODEG00000014439) #16	NOXO1 (ENSODEG00000013919) #17	TBL3 (ENSODEG00000013930) #18	RNF151 (ENSODEG00000014607) #19	ENSODEG00000013906 ##20	RPL3L (ENSODEG00000015166) #22	ENSODEG00000014218 #23	HS3ST6 (ENSODEG00000013773) #24	ENSODEG00000020141	ENSODEG00000013846 #25	FAHD1 (ENSODEG00000020210)	HAGH (ENSODEG00000014503)	IGFALS (ENSODEG00000014585) #26	NUBP2 (ENSODEG00000014655) #27	SPSB3 (ENSODEG00000014798) #28	EME2 (ENSODEG00000015003) #29	MRPS34 (ENSODEG00000015453) #30	NME3 (ENSODEG00000015019) #31	MAPK8IP3 (ENSODEG00000016004) #32	JPT2 (ENSODEG00000016076) #33	CRAMP1 (ENSODEG00000014456) #34
Naked mole-rat female	MODERN SPECIES	15	RAB26 (ENSHGLG00000001632) #10	PKD1 (ENSHGLG00000001913)	TSC2 (ENSHGLG00000002350) #11	NTHL1 (ENSHGLG00000002461) #12	NHERF2 (ENSHGLG00000002563) #13	ENSHGLG00000032740	ZNF598 (ENSHGLG00000002708) #14	ENSHGLG00000035150	SYNGR3 (ENSHGLG00000031929)	GFER (ENSHGLG00000048995) #16	NOXO1 (ENSHGLG00000044783) #17	TBL3 (ENSHGLG00000002431) #18	ENSHGLG00000002492 #19	ENSHGLG00000002542 ##20	ENSHGLG00000003234 #21	RPL3L (ENSHGLG00000003329) #22	HS3ST6 (ENSHGLG00000039701) #24	ENSHGLG00000003597 #25	FAHD1 (ENSHGLG00000041252)	HAGH (ENSHGLG00000003923)	IGFALS (ENSHGLG00000004496) #26	NUBP2 (ENSHGLG00000004842) #27	SPSB3 (ENSHGLG00000001146) #28	EME2 (ENSHGLG00000038718) #29	MRPS34 (ENSHGLG00000001213) #30	NME3 (ENSHGLG00000001237) #31	MAPK8IP3 (ENSHGLG00000001589) #32	JPT2 (ENSHGLG00000046712) #33	CRAMP1 (ENSHGLG00000001969) #34	TMEM204 (ENSHGLG00000032434) #35	IFT140 (ENSHGLG00000002078) #36
Rodentia_B	ANCESTRAL SPECIES	15	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Kangaroo rat	MODERN SPECIES	333	Caskin1 (ENSDORG00000001740) #8	Traf7 (ENSDORG00000001727) #9	Rab26 (ENSDORG00000001722) #10	Pkd1 (ENSDORG00000013708)	Tsc2 (ENSDORG00000013702) #11	Nthl1 (ENSDORG00000013701) #12	Nherf2 (ENSDORG00000013700) #13	Zfp598 (ENSDORG00000007907) #14	Syngr3 (ENSDORG00000024759)	Gfer (ENSDORG00000025553) #16	Noxo1 (ENSDORG00000007379) #17	Tbl3 (ENSDORG00000007377) #18	ENSDORG00000007376 #19	ENSDORG00000007375 ##20	Ndufb10 (ENSDORG00000007374) #21	Rpl3l (ENSDORG00000007373) #22	Msrb1 (ENSDORG00000025189) #23	Hs3st6 (ENSDORG00000023206) #24	Meiob (ENSDORG00000012742) #25	Hagh (ENSDORG00000009673)	Igfals (ENSDORG00000009672) #26	Nubp2 (ENSDORG00000009670) #27	Spsb3 (ENSDORG00000009668) #28	ENSDORG00000027160 #29	ENSDORG00000009659 #32	ENSDORG00000026402 #32	Jpt2 (ENSDORG00000025742) #33	Cramp1 (ENSDORG00000013715) #34	Ift140 (ENSDORG00000004166) #36	Tmem204 (ENSDORG00000028876) #35	Telo2 (ENSDORG00000004164) #37
Myomorpha	ANCESTRAL SPECIES	17	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Lesser Egyptian jerboa	MODERN SPECIES	47	Traf7 (ENSJJAG00000017715) #9	Rab26 (ENSJJAG00000016687) #10	Pkd1 (ENSJJAG00000014558)	Tsc2 (ENSJJAG00000010773) #11	Nthl1 (ENSJJAG00000010038) #12	Nherf2 (ENSJJAG00000022481) #13	ENSJJAG00000004536	Zfp598 (ENSJJAG00000012668) #14	Syngr3 (ENSJJAG00000022558)	Gfer (ENSJJAG00000002661) #16	Noxo1 (ENSJJAG00000019469) #17	Tbl3 (ENSJJAG00000004124) #18	Rnf151 (ENSJJAG00000006822) #19	ENSJJAG00000011197 ##20	ENSJJAG00000011730 #21	Rpl3l (ENSJJAG00000011979) #22	Msrb1 (ENSJJAG00000023868) #23	Hs3st6 (ENSJJAG00000018711) #24	Meiob (ENSJJAG00000020956) #25	Fahd1 (ENSJJAG00000012552)	ENSJJAG00000018924	Igfals (ENSJJAG00000014391) #26	Nubp2 (ENSJJAG00000010092) #27	Spsb3 (ENSJJAG00000005206) #28	Eme2 (ENSJJAG00000022042) #29	Mrps34 (ENSJJAG00000016768) #30	Nme3 (ENSJJAG00000014938) #31	Mapk8ip3 (ENSJJAG00000012043) #32	ENSJJAG00000022922 #33	Cramp1 (ENSJJAG00000019556) #34	Tmem204 (ENSJJAG00000016676) #35
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1760			Pkd1 (ENSNGAG00000023541)	Tsc2 (ENSNGAG00000021283) #11	Nthl1 (ENSNGAG00000023847) #12	Nherf2 (ENSNGAG00000016521) #13	Npw (ENSNGAG00000022441)	Zfp598 (ENSNGAG00000021072) #14	Syngr3 (ENSNGAG00000004429)	Gfer (ENSNGAG00000024200) #16	Noxo1 (ENSNGAG00000023406) #17	Rnf151 (ENSNGAG00000003547) #19	Tbl3 (ENSNGAG00000002428) #18	ENSNGAG00000013739 ##20	Ndufb10 (ENSNGAG00000015798) #21	Rpl3l (ENSNGAG00000023163) #22	Msrb1 (ENSNGAG00000015847) #23	Hs3st6 (ENSNGAG00000011421) #24	Meiob (ENSNGAG00000006985) #25	Fahd1 (ENSNGAG00000013637)	Hagh (ENSNGAG00000024100)	Igfals (ENSNGAG00000014838) #26	Nubp2 (ENSNGAG00000001165) #27	Spsb3 (ENSNGAG00000023785) #28	Mrps34 (ENSNGAG00000023629) #30	Nme3 (ENSNGAG00000022562) #31	Mapk8ip3 (ENSNGAG00000021573) #32	Jpt2 (ENSNGAG00000021166) #33	Cramp1 (ENSNGAG00000012239) #34	ENSNGAG00000019576 #36	Tmem204 (ENSNGAG00000016981) #35
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Rat	MODERN SPECIES	1	Traf7 (ENSRNOG00000003131) #9	Rab26 (ENSRNOG00000042086) #10	Pkd1 (ENSRNOG00000010771)	Tsc2 (ENSRNOG00000011375) #11	Nthl1 (ENSRNOG00000012213) #12	Nherf2 (ENSRNOG00000002997) #13	Npw (ENSRNOG00000012390)	Zfp598 (ENSRNOG00000012434) #14	Syngr3 (ENSRNOG00000012620)	Gfer (ENSRNOG00000013370) #16	Noxo1 (ENSRNOG00000025117) #17	Tbl3 (ENSRNOG00000013429) #18	Rnf151 (ENSRNOG00000014127) #19	Rps2 (ENSRNOG00000014179) ##20	Ndufb10 (ENSRNOG00000014568) #21	Rpl3l (ENSRNOG00000014641) #22	Msrb1 (ENSRNOG00000055314) #23	Hs3st6 (ENSRNOG00000014672) #24	Meiob (ENSRNOG00000014711) #25	Fahd1 (ENSRNOG00000014727)	Hagh (ENSRNOG00000014743)	Igfals (ENSRNOG00000015061) #26	Nubp2 (ENSRNOG00000015090) #27	Spsb3 (ENSRNOG00000015300) #28	Eme2 (ENSRNOG00000024867) #29	Mrps34 (ENSRNOG00000015479) #30	Nme3 (ENSRNOG00000015749) #31	Mapk8ip3 (ENSRNOG00000033568) #32	Jpt2 (ENSRNOG00000024661) #33	Cramp1 (ENSRNOG00000024635) #34	Ift140 (ENSRNOG00000016545) #36
Mus	ANCESTRAL SPECIES	21	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Shrew mouse	MODERN SPECIES	13	Caskin1 (MGP_PahariEiJ_G0023505) #8	Traf7 (MGP_PahariEiJ_G0023506) #9	Rab26 (MGP_PahariEiJ_G0023507) #10	Pkd1 (MGP_PahariEiJ_G0023508)	Nthl1 (MGP_PahariEiJ_G0023509) #12	Nherf2 (MGP_PahariEiJ_G0023510) #13	Npw (MGP_PahariEiJ_G0023511)	Zfp598 (MGP_PahariEiJ_G0023512) #14	Syngr3 (MGP_PahariEiJ_G0023513)	Gfer (MGP_PahariEiJ_G0023514) #16	Noxo1 (MGP_PahariEiJ_G0023515) #17	Tbl3 (MGP_PahariEiJ_G0023516) #18	Rnf151 (MGP_PahariEiJ_G0023517) #19	MGP_PahariEiJ_G0023518 ##20	Ndufb10 (MGP_PahariEiJ_G0023519) #21	Rpl3l (MGP_PahariEiJ_G0023520) #22	Msrb1 (MGP_PahariEiJ_G0023521) #23	Hs3st6 (MGP_PahariEiJ_G0023522) #24	Meiob (MGP_PahariEiJ_G0023523) #25	Hagh (MGP_PahariEiJ_G0023524)	Fahd1 (MGP_PahariEiJ_G0023525)	Igfals (MGP_PahariEiJ_G0023526) #26	Nubp2 (MGP_PahariEiJ_G0023527) #27	MGP_PahariEiJ_G0023528 #28	Eme2 (MGP_PahariEiJ_G0023529) #29	Mapk8ip3 (MGP_PahariEiJ_G0023530) #32	Mrps34 (MGP_PahariEiJ_G0023531) #30	Nme3 (MGP_PahariEiJ_G0023532) #31	MGP_PahariEiJ_G0023533 #33	MGP_PahariEiJ_G0023534 #33	Cramp1 (MGP_PahariEiJ_G0023535) #34
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652.r #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Ryukyu mouse	MODERN SPECIES	8	MGP_CAROLIEiJ_G0021188	Caskin1 (MGP_CAROLIEiJ_G0021189) #8	Traf7 (MGP_CAROLIEiJ_G0021190) #9	Rab26 (MGP_CAROLIEiJ_G0021191) #10	Pkd1 (MGP_CAROLIEiJ_G0021192)	Nthl1 (MGP_CAROLIEiJ_G0021193) #12	Nherf2 (MGP_CAROLIEiJ_G0021194) #13	MGP_CAROLIEiJ_G0021195	Syngr3 (MGP_CAROLIEiJ_G0021196)	Gfer (MGP_CAROLIEiJ_G0021197) #16	Noxo1 (MGP_CAROLIEiJ_G0021198) #17	Tbl3 (MGP_CAROLIEiJ_G0021199) #18	Rnf151 (MGP_CAROLIEiJ_G0021200) #19	MGP_CAROLIEiJ_G0021201 ##20	Ndufb10 (MGP_CAROLIEiJ_G0021202) #21	Rpl3l (MGP_CAROLIEiJ_G0021203) #22	Msrb1 (MGP_CAROLIEiJ_G0021204) #23	Hs3st6 (MGP_CAROLIEiJ_G0021205) #24	Meiob (MGP_CAROLIEiJ_G0021206) #25	Hagh (MGP_CAROLIEiJ_G0021207)	Fahd1 (MGP_CAROLIEiJ_G0021208)	Igfals (MGP_CAROLIEiJ_G0021209) #26	Nubp2 (MGP_CAROLIEiJ_G0021210) #27	MGP_CAROLIEiJ_G0021211 #28	Eme2 (MGP_CAROLIEiJ_G0021212) #29	Mapk8ip3 (MGP_CAROLIEiJ_G0021213) #32	Mrps34 (MGP_CAROLIEiJ_G0021214) #30	Nme3 (MGP_CAROLIEiJ_G0021215) #31	MGP_CAROLIEiJ_G0021216 #33	Cramp1 (MGP_CAROLIEiJ_G0021217) #34	Ift140 (MGP_CAROLIEiJ_G0021218) #36
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652.r #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Mouse	MODERN SPECIES	8	Traf7 (ENSMUSG00000052752) #9	Rab26 (ENSMUSG00000079657) #10	Pkd1 (ENSMUSG00000032855)	Tsc2 (ENSMUSG00000002496) #11	Nthl1 (ENSMUSG00000041429) #12	Nherf2 (ENSMUSG00000002504) #13	Npw (ENSMUSG00000071230)	Zfp598 (ENSMUSG00000041130) #14	Syngr3 (ENSMUSG00000007021)	Gfer (ENSMUSG00000040888) #16	Noxo1 (ENSMUSG00000019320) #17	Tbl3 (ENSMUSG00000040688) #18	Rnf151 (ENSMUSG00000008482) #19	Rps2 (ENSMUSG00000044533) ##20	Ndufb10 (ENSMUSG00000040048) #21	Rpl3l (ENSMUSG00000002500) #22	Msrb1 (ENSMUSG00000075705) #23	Hs3st6 (ENSMUSG00000039628) #24	Meiob (ENSMUSG00000024155) #25	Hagh (ENSMUSG00000024158)	Fahd1 (ENSMUSG00000045316)	Igfals (ENSMUSG00000046070) #26	Nubp2 (ENSMUSG00000039183) #27	Spsb3 (ENSMUSG00000024160) #28	Eme2 (ENSMUSG00000073436) #29	Mapk8ip3 (ENSMUSG00000024163) #32	Mrps34 (ENSMUSG00000038880) #30	Nme3 (ENSMUSG00000073435) #31	Jpt2 (ENSMUSG00000024165) #33	Cramp1 (ENSMUSG00000038002) #34	Ift140 (ENSMUSG00000024169) #36
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00970000194741	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652.q.b #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Steppe mouse	MODERN SPECIES	3126	Traf7 (ENSMSIG00000006269) #9	Rab26 (ENSMSIG00000006511) #10	ENSMSIG00000006577	Tsc2 (ENSMSIG00000006743) #11	Nthl1 (ENSMSIG00000007949) #12	Nherf2 (ENSMSIG00000007960) #13	Npw (ENSMSIG00000007993)	Zfp598 (ENSMSIG00000008003) #14	ENSMSIG00000008029	ENSMSIG00000008048 #16	Noxo1 (ENSMSIG00000008056) #17	Tbl3 (ENSMSIG00000008080) #18	Rnf151 (ENSMSIG00000008128) #19	Rps2 (ENSMSIG00000008161) ##20	Ndufb10 (ENSMSIG00000008241) #21	Rpl3l (ENSMSIG00000008247) #22	Msrb1 (ENSMSIG00000008280) #23	Hs3st6 (ENSMSIG00000008324) #24	Meiob (ENSMSIG00000008345) #25	Fahd1 (ENSMSIG00000008407)	Hagh (ENSMSIG00000008421)	Igfals (ENSMSIG00000008467) #26	Nubp2 (ENSMSIG00000008482) #27	ENSMSIG00000008500 #28	Eme2 (ENSMSIG00000008685) #29	Mrps34 (ENSMSIG00000008733) #30	Nme3 (ENSMSIG00000008746) #31	Mapk8ip3 (ENSMSIG00000008777) #32	ENSMSIG00000010638 #33	Cramp1 (ENSMSIG00000010664) #34	Ift140 (ENSMSIG00000010724) #36
spretus	MODERN SPECIES	8	Ptx4 (MGP_SPRETEiJ_G0022132)	Telo2 (MGP_SPRETEiJ_G0022131) #37	Tmem204 (MGP_SPRETEiJ_G0022130) #35	Ift140 (MGP_SPRETEiJ_G0022129) #36	Cramp1 (MGP_SPRETEiJ_G0022128) #34	Jpt2 (MGP_SPRETEiJ_G0022127) #33	Nme3 (MGP_SPRETEiJ_G0022126) #31	Mrps34 (MGP_SPRETEiJ_G0022125) #30	Mapk8ip3 (MGP_SPRETEiJ_G0022124) #32	MGP_SPRETEiJ_G0022123	Spsb3 (MGP_SPRETEiJ_G0022122) #28	Nubp2 (MGP_SPRETEiJ_G0022121) #27	Igfals (MGP_SPRETEiJ_G0022120) #26	MGP_SPRETEiJ_G0022119	Ndufb10 (MGP_SPRETEiJ_G0022118) #21	MGP_SPRETEiJ_G0022117 #22	Fahd1 (MGP_SPRETEiJ_G0022116)	Hagh (MGP_SPRETEiJ_G0022115)	Meiob (MGP_SPRETEiJ_G0022114) #25	Hs3st6 (MGP_SPRETEiJ_G0022113) #24	Msrb1 (MGP_SPRETEiJ_G0022112) #23	Rnf151 (MGP_SPRETEiJ_G0022111) #19	Tbl3 (MGP_SPRETEiJ_G0022110) #18	Noxo1 (MGP_SPRETEiJ_G0022109) #17	Gfer (MGP_SPRETEiJ_G0022108) #16	Syngr3 (MGP_SPRETEiJ_G0022107)	Zfp598 (MGP_SPRETEiJ_G0022106) #14	MGP_SPRETEiJ_G0022105	Nherf2 (MGP_SPRETEiJ_G0022104) #13	Nthl1 (MGP_SPRETEiJ_G0022103) #12	Pkd1 (MGP_SPRETEiJ_G0022102)
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Chinese hamster chok1gshd	MODERN SPECIES	229	ENSCGRG00001013600 #9	Rab26 (ENSCGRG00001024291) #10	Pkd1 (ENSCGRG00001020324)	Tsc2 (ENSCGRG00001012289) #11	NTHL1 (ENSCGRG00001012482) #12	Nherf2 (ENSCGRG00001015951) #13	Npw (ENSCGRG00001017678)	Zfp598 (ENSCGRG00001021070) #14	Syngr3 (ENSCGRG00001014491)	Gfer (ENSCGRG00001023595) #16	Noxo1 (ENSCGRG00001020009) #17	Tbl3 (ENSCGRG00001021817) #18	Rnf151 (ENSCGRG00001023396) #19	Rps2 (ENSCGRG00001023670) ##20	Ndufb10 (ENSCGRG00001013121) #21	Rpl3l (ENSCGRG00001016900) #22	Msrb1 (ENSCGRG00001023043) #23	Hs3st6 (ENSCGRG00001024254) #24	Meiob (ENSCGRG00001024640) #25	Fahd1 (ENSCGRG00001013933)	Hagh (ENSCGRG00001014522)	Igfals (ENSCGRG00001023230) #26	Nubp2 (ENSCGRG00001024233) #27	Spsb3 (ENSCGRG00001017880) #28	Eme2 (ENSCGRG00001014405) #29	Mrps34 (ENSCGRG00001023318) #30	Nme3 (ENSCGRG00001024438) #31	Mapk8ip3 (ENSCGRG00001009625) #32	Jpt2 (ENSCGRG00001023398) #33	Cramp1 (ENSCGRG00001024738) #34	Ift140 (ENSCGRG00001020155) #36
Golden Hamster	MODERN SPECIES	733	Caskin1 (ENSMAUG00000008186) #8	Traf7 (ENSMAUG00000010013) #9	Rab26 (ENSMAUG00000008853) #10	Pkd1 (ENSMAUG00000014808)	Tsc2 (ENSMAUG00000007571) #11	Nthl1 (ENSMAUG00000011440) #12	Nherf2 (ENSMAUG00000005047) #13	Npw (ENSMAUG00000009076)	Zfp598 (ENSMAUG00000020596) #14	Syngr3 (ENSMAUG00000004857)	Gfer (ENSMAUG00000001778) #16	Noxo1 (ENSMAUG00000019212) #17	Tbl3 (ENSMAUG00000008718) #18	Rnf151 (ENSMAUG00000004941) #19	Ndufb10 (ENSMAUG00000007967) #21	Rpl3l (ENSMAUG00000008094) #22	Msrb1 (ENSMAUG00000019299) #23	Hs3st6 (ENSMAUG00000018680) #24	Meiob (ENSMAUG00000021803) #25	Fahd1 (ENSMAUG00000008227)	Hagh (ENSMAUG00000012144)	Igfals (ENSMAUG00000021813) #26	Nubp2 (ENSMAUG00000006099) #27	Spsb3 (ENSMAUG00000011949) #28	Eme2 (ENSMAUG00000008967) #29	Mrps34 (ENSMAUG00000015906) #30	Nme3 (ENSMAUG00000008485) #31	Mapk8ip3 (ENSMAUG00000010859) #32	ENSMAUG00000007417	Jpt2 (ENSMAUG00000005592) #33	Cramp1 (ENSMAUG00000019364) #34
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.a.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Northern American deer mouse	MODERN SPECIES	21	Rab26 (ENSPEMG00000016748) #10	ENSPEMG00000027366	ENSPEMG00000026802	Tsc2 (ENSPEMG00000017951) #11	Nthl1 (ENSPEMG00000015321) #12	Nherf2 (ENSPEMG00000008746) #13	Npw (ENSPEMG00000013065)	Zfp598 (ENSPEMG00000013518) #14	Syngr3 (ENSPEMG00000025114)	Gfer (ENSPEMG00000024300) #16	Noxo1 (ENSPEMG00000018859) #17	Tbl3 (ENSPEMG00000009768) #18	Rnf151 (ENSPEMG00000010081) #19	ENSPEMG00000012503 ##20	Ndufb10 (ENSPEMG00000018512) #21	Rpl3l (ENSPEMG00000010667) #22	Msrb1 (ENSPEMG00000018902) #23	Hs3st6 (ENSPEMG00000016998) #24	ENSPEMG00000025436 #25	Spdl1 (ENSPEMG00000009912)	Dock2 (ENSPEMG00000015007)	Insyn2b (ENSPEMG00000015788)	Foxi1 (ENSPEMG00000015123)	4930469K13Rik (ENSPEMG00000029094)	Lcp2 (ENSPEMG00000011935)	Kcnmb1 (ENSPEMG00000025688)	Kcnip1 (ENSPEMG00000007681)	Gabrp (ENSPEMG00000008255)	Ranbp17 (ENSPEMG00000013086)	Tlx3 (ENSPEMG00000009002)	ENSPEMG00000010032
Prairie vole	MODERN SPECIES	15	Traf7 (ENSMOCG00000017636) #9	Rab26 (ENSMOCG00000014524) #10	Pkd1 (ENSMOCG00000018861)	Tsc2 (ENSMOCG00000014270) #11	Nthl1 (ENSMOCG00000022584) #12	Nherf2 (ENSMOCG00000022945) #13	Npw (ENSMOCG00000007567)	Zfp598 (ENSMOCG00000015693) #14	Syngr3 (ENSMOCG00000010060)	Gfer (ENSMOCG00000003379) #16	Noxo1 (ENSMOCG00000022179) #17	Tbl3 (ENSMOCG00000019634) #18	Rnf151 (ENSMOCG00000021816) #19	ENSMOCG00000014200 ##20	Ndufb10 (ENSMOCG00000011750) #21	Rpl3l (ENSMOCG00000020012) #22	Msrb1 (ENSMOCG00000013864) #23	Hs3st6 (ENSMOCG00000022877) #24	Meiob (ENSMOCG00000020796) #25	Fahd1 (ENSMOCG00000001032)	Hagh (ENSMOCG00000020674)	Igfals (ENSMOCG00000013702) #26	Nubp2 (ENSMOCG00000003091) #27	Spsb3 (ENSMOCG00000000734) #28	Eme2 (ENSMOCG00000019621) #29	Mrps34 (ENSMOCG00000004274) #30	ENSMOCG00000003271 #31	Mapk8ip3 (ENSMOCG00000018334) #32	Jpt2 (ENSMOCG00000022903) #33	Cramp1 (ENSMOCG00000015569) #34	ENSMOCG00000011625 #36
Laurasiatheria	ANCESTRAL SPECIES	10	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000017606.a.b #22
Hedgehog	MODERN SPECIES	3846																RPL3L (ENSEEUG00000005554) #22
Laurasiatheria_a	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Laurasiatheria_b	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Carnivora	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Felidae	ANCESTRAL SPECIES	25	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Panthera	ANCESTRAL SPECIES	29	ENSGT00940000157022 #9	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Tiger	MODERN SPECIES	590	ENSPTIG00000015543	ENSPTIG00000015335	BRICD5 (ENSPTIG00000015207)	MLST8 (ENSPTIG00000014849) #7	TRAF7 (ENSPTIG00000014610) #9	ENSPTIG00000014331	RAB26 (ENSPTIG00000014200) #10	NTHL1 (ENSPTIG00000011471) #12	NHERF2 (ENSPTIG00000011167) #13	GFER (ENSPTIG00000011023) #16	ENSPTIG00000010738 #17	TBL3 (ENSPTIG00000010377) #18	ENSPTIG00000010338 #19	ENSPTIG00000010284 ##20	NDUFB10 (ENSPTIG00000009910) #21	RPL3L (ENSPTIG00000009722) #22	MSRB1 (ENSPTIG00000009446) #23	HS3ST6 (ENSPTIG00000009671) #24	ENSPTIG00000009036 #25	FAHD1 (ENSPTIG00000009011)	HAGH (ENSPTIG00000008853)	NUBP2 (ENSPTIG00000008814) #27	EME2 (ENSPTIG00000008505) #29	MAPK8IP3 (ENSPTIG00000007779) #32	JPT2 (ENSPTIG00000007704) #33	TMEM204 (ENSPTIG00000006591) #35	IFT140 (ENSPTIG00000005835) #36	TELO2 (ENSPTIG00000005753) #37	PTX4 (ENSPTIG00000005448)	CLCN7 (ENSPTIG00000005037)	UNKL (ENSPTIG00000000863)
Panthera_a	ANCESTRAL SPECIES	31	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.a #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
lion	MODERN SPECIES	16	CASKIN1 (ENSPLOG00000020847) #8	TRAF7 (ENSPLOG00000020731) #9	RAB26 (ENSPLOG00000020582) #10	TSC2 (ENSPLOG00000016635) #11	NTHL1 (ENSPLOG00000016125) #12	NHERF2 (ENSPLOG00000015907) #13	ENSPLOG00000015835	ZNF598 (ENSPLOG00000015814) #14	SYNGR3 (ENSPLOG00000015769)	GFER (ENSPLOG00000015737) #16	NOXO1 (ENSPLOG00000015582) #17	TBL3 (ENSPLOG00000015297) #18	RNF151 (ENSPLOG00000015190) #19	RPS2 (ENSPLOG00000015051) ##20	NDUFB10 (ENSPLOG00000014912) #21	RPL3L (ENSPLOG00000014800) #22	MSRB1 (ENSPLOG00000014740) #23	HS3ST6 (ENSPLOG00000014723) #24	ENSPLOG00000014482 #25	FAHD1 (ENSPLOG00000014422)	HAGH (ENSPLOG00000014311)	IGFALS (ENSPLOG00000014256) #26	NUBP2 (ENSPLOG00000014050) #27	SPSB3 (ENSPLOG00000013972) #28	EME2 (ENSPLOG00000013867) #29	MRPS34 (ENSPLOG00000013830) #30	NME3 (ENSPLOG00000013752) #31	MAPK8IP3 (ENSPLOG00000012791) #32	JPT2 (ENSPLOG00000012622) #33	CRAMP1 (ENSPLOG00000011890) #34	TMEM204 (ENSPLOG00000011810) #35
leopard	MODERN SPECIES	53	MLST8 (ENSPPRG00000022843) #7	TRAF7 (ENSPPRG00000002445) #9	RAB26 (ENSPPRG00000002683) #10	TSC2 (ENSPPRG00000019360) #11	NTHL1 (ENSPPRG00000021879) #12	NHERF2 (ENSPPRG00000024928) #13	NPW (ENSPPRG00000024862)	ZNF598 (ENSPPRG00000024412) #14	SYNGR3 (ENSPPRG00000024180)	GFER (ENSPPRG00000023925) #16	ENSPPRG00000000893 #18	ENSPPRG00000001717 #18	RNF151 (ENSPPRG00000001989) #19	RPS2 (ENSPPRG00000004155) ##20	ENSPPRG00000004667 #21	RPL3L (ENSPPRG00000005785) #22	ENSPPRG00000006325 #23	ENSPPRG00000009865 #23	HS3ST6 (ENSPPRG00000010023) #24	ENSPPRG00000011909 #25	FAHD1 (ENSPPRG00000012078)	HAGH (ENSPPRG00000012875)	IGFALS (ENSPPRG00000013707) #26	NUBP2 (ENSPPRG00000017030) #27	SPSB3 (ENSPPRG00000018726) #28	EME2 (ENSPPRG00000020258) #29	MRPS34 (ENSPPRG00000021470) #30	ENSPPRG00000021662 #31	MAPK8IP3 (ENSPPRG00000001108) #32	JPT2 (ENSPPRG00000001951) #33	CRAMP1 (ENSPPRG00000003952) #34
Cat	MODERN SPECIES	247	TRAF7 (ENSFCAG00000006348) #9	RAB26 (ENSFCAG00000018898) #10	PKD1 (ENSFCAG00000002212)	TSC2 (ENSFCAG00000011746) #11	NTHL1 (ENSFCAG00000002211) #12	NHERF2 (ENSFCAG00000022929) #13	ENSFCAG00000042975	ZNF598 (ENSFCAG00000025422) #14	SYNGR3 (ENSFCAG00000011743)	GFER (ENSFCAG00000008479) #16	NOXO1 (ENSFCAG00000011741) #17	TBL3 (ENSFCAG00000011740) #18	RNF151 (ENSFCAG00000011739) #19	RPS2 (ENSFCAG00000029191) ##20	NDUFB10 (ENSFCAG00000011738) #21	RPL3L (ENSFCAG00000011737) #22	MSRB1 (ENSFCAG00000039302) #23	HS3ST6 (ENSFCAG00000038639) #24	MEIOB (ENSFCAG00000011733) #25	FAHD1 (ENSFCAG00000031483)	HAGH (ENSFCAG00000011731)	IGFALS (ENSFCAG00000040872) #26	NUBP2 (ENSFCAG00000024659) #27	SPSB3 (ENSFCAG00000011730) #28	EME2 (ENSFCAG00000011728) #29	MRPS34 (ENSFCAG00000022788) #30	NME3 (ENSFCAG00000046405) #31	MAPK8IP3 (ENSFCAG00000011724) #32	JPT2 (ENSFCAG00000034589) #33	CRAMP1 (ENSFCAG00000011852) #34	IFT140 (ENSFCAG00000010653) #36
Caniformia	ANCESTRAL SPECIES	8	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Canidae	ANCESTRAL SPECIES	3	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00940000153095.g.a.b ##20	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36	ENSGT00390000015528 #35
Canis_lupus	ANCESTRAL SPECIES	2	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36	ENSGT00390000015528 #35
Dingo	MODERN SPECIES	172	TRAF7 (ENSCAFG00020026190) #9	RAB26 (ENSCAFG00020026193) #10	ENSCAFG00020026197	ENSCAFG00020026208 #11	NTHL1 (ENSCAFG00020026294) #12	NHERF2 (ENSCAFG00020026295) #13	ENSCAFG00020026296	ZNF598 (ENSCAFG00020026302) #14	SYNGR3 (ENSCAFG00020026317)	GFER (ENSCAFG00020026319) #16	NOXO1 (ENSCAFG00020026320) #17	TBL3 (ENSCAFG00020026321) #18	RNF151 (ENSCAFG00020026323) #19	ENSCAFG00020026327 ##20	ENSCAFG00020000199 #21	RPL3L (ENSCAFG00020000233) #22	MSRB1 (ENSCAFG00020000325) #23	HS3ST6 (ENSCAFG00020000329) #24	ENSCAFG00020000382 #25	FAHD1 (ENSCAFG00020000583)	HAGH (ENSCAFG00020000595)	IGFALS (ENSCAFG00020000602) #26	NUBP2 (ENSCAFG00020000610) #27	SPSB3 (ENSCAFG00020000616) #28	EME2 (ENSCAFG00020000621) #29	MRPS34 (ENSCAFG00020000675) #30	MAPK8IP3 (ENSCAFG00020000709) #32	JPT2 (ENSCAFG00020000738) #33	CRAMP1 (ENSCAFG00020000788) #34	IFT140 (ENSCAFG00020001129) #36	TMEM204 (ENSCAFG00020001166) #35
Dog	MODERN SPECIES	34	MLST8 (ENSCAFG00845004640) #7	BRICD5 (ENSCAFG00845004655)	TRAF7 (ENSCAFG00845004697) #9	RAB26 (ENSCAFG00845015769) #10	TSC2 (ENSCAFG00845016084) #11	NTHL1 (ENSCAFG00845016947) #12	NHERF2 (ENSCAFG00845017011) #13	ZNF598 (ENSCAFG00845017173) #14	SYNGR3 (ENSCAFG00845017505)	GFER (ENSCAFG00845017559) #16	NOXO1 (ENSCAFG00845017645) #17	TBL3 (ENSCAFG00845017737) #18	RNF151 (ENSCAFG00845018062) #19	NDUFB10 (ENSCAFG00845018108) #21	ENSCAFG00845018221 ##20	RPL3L (ENSCAFG00845018359) #22	MSRB1 (ENSCAFG00845018543) #23	HS3ST6 (ENSCAFG00845018590) #24	ENSCAFG00845018651 #25	HAGH (ENSCAFG00845018825)	FAHD1 (ENSCAFG00845019076)	IGFALS (ENSCAFG00845019117) #26	NUBP2 (ENSCAFG00845019149) #27	SPSB3 (ENSCAFG00845019224) #28	ENSCAFG00845019435 #29	MRPS34 (ENSCAFG00845019497) #30	MAPK8IP3 (ENSCAFG00845019811) #32	JPT2 (ENSCAFG00845020882) #33	CRAMP1 (ENSCAFG00845020921) #34	IFT140 (ENSCAFG00845021074) #36	ENSCAFG00845021199 #35
Red fox	MODERN SPECIES	200	ENSVVUG00000009330 #8	TRAF7 (ENSVVUG00000009335) #9	RAB26 (ENSVVUG00000009402) #10	PKD1 (ENSVVUG00000009411)	TSC2 (ENSVVUG00000009475) #11	NTHL1 (ENSVVUG00000009512) #12	SLC9A3R2 (ENSVVUG00000009515) #13	ZNF598 (ENSVVUG00000009523) #14	SYNGR3 (ENSVVUG00000009541)	GFER (ENSVVUG00000009553) #16	ENSVVUG00000009559 #17	TBL3 (ENSVVUG00000009589) #18	RNF151 (ENSVVUG00000009605) #19	ENSVVUG00000009633 ##20	NDUFB10 (ENSVVUG00000009798) #21	RPL3L (ENSVVUG00000009805) #22	MSRB1 (ENSVVUG00000009825) #23	HS3ST6 (ENSVVUG00000009829) #24	MEIOB (ENSVVUG00000009837) #25	FAHD1 (ENSVVUG00000009934)	HAGH (ENSVVUG00000009937)	IGFALS (ENSVVUG00000009953) #26	NUBP2 (ENSVVUG00000009958) #27	SPSB3 (ENSVVUG00000009994) #28	MRPS34 (ENSVVUG00000010000) #30	MAPK8IP3 (ENSVVUG00000010026) #32	JPT2 (ENSVVUG00000010820) #34	IFT140 (ENSVVUG00000010908) #36	TMEM204 (ENSVVUG00000010997) #35	TELO2 (ENSVVUG00000011008) #37	PTX4 (ENSVVUG00000011033)
Caniformia_b	ANCESTRAL SPECIES	7	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Mustelinae	ANCESTRAL SPECIES	15	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
American mink	MODERN SPECIES	111	TRAF7 (ENSNVIG00000022804) #9	RAB26 (ENSNVIG00000022798) #10	PKD1 (ENSNVIG00000022607)	TSC2 (ENSNVIG00000022292) #11	NTHL1 (ENSNVIG00000022264) #12	NHERF2 (ENSNVIG00000022253) #13	ENSNVIG00000022244	ZNF598 (ENSNVIG00000022223) #14	SYNGR3 (ENSNVIG00000022207)	GFER (ENSNVIG00000022204) #16	NOXO1 (ENSNVIG00000022193) #17	TBL3 (ENSNVIG00000022174) #18	RNF151 (ENSNVIG00000022168) #19	ENSNVIG00000022145	ENSNVIG00000022130 #21	RPL3L (ENSNVIG00000022110) #22	MSRB1 (ENSNVIG00000022096) #23	HS3ST6 (ENSNVIG00000022091) #24	C9J0S1 (ENSNVIG00000022084) #25	FAHD1 (ENSNVIG00000022077)	ENSNVIG00000022054	IGFALS (ENSNVIG00000022037) #26	NUBP2 (ENSNVIG00000022036) #27	SPSB3 (ENSNVIG00000022024) #28	EME2 (ENSNVIG00000022005) #29	MRPS34 (ENSNVIG00000021989) #30	ENSNVIG00000021975 #31	MAPK8IP3 (ENSNVIG00000019434) #32	JPT2 (ENSNVIG00000019338) #33	CRAMP1 (ENSNVIG00000019268) #34	TM204 (ENSNVIG00000019228) #35
Ferret	MODERN SPECIES	189	TRAF7 (ENSMPUG00000015411) #9	RAB26 (ENSMPUG00000015412) #10	PKD1 (ENSMPUG00000015425)	ENSMPUG00000020060	TSC2 (ENSMPUG00000015487) #11	NTHL1 (ENSMPUG00000015492) #12	NHERF2 (ENSMPUG00000015496) #13	ZNF598 (ENSMPUG00000015523) #14	SYNGR3 (ENSMPUG00000015525)	GFER (ENSMPUG00000015534) #16	NOXO1 (ENSMPUG00000015539) #17	TBL3 (ENSMPUG00000015545) #18	RNF151 (ENSMPUG00000015546) #19	RPS2 (ENSMPUG00000015547) ##20	NDUFB10 (ENSMPUG00000015557) #21	RPL3L (ENSMPUG00000015565) #22	HS3ST6 (ENSMPUG00000015567) #24	ENSMPUG00000015569 #25	FAHD1 (ENSMPUG00000020061)	HAGH (ENSMPUG00000015572)	IGFALS (ENSMPUG00000015594) #26	NUBP2 (ENSMPUG00000015596) #27	SPSB3 (ENSMPUG00000015597) #28	EME2 (ENSMPUG00000015605) #29	MRPS34 (ENSMPUG00000015607) #30	MAPK8IP3 (ENSMPUG00000015614) #32	CRAMP1 (ENSMPUG00000015618) #34	ENSMPUG00000020062	IFT140 (ENSMPUG00000015620) #36	TMEM204 (ENSMPUG00000015628) #35	TELO2 (ENSMPUG00000015631) #37
Ursidae	ANCESTRAL SPECIES	3	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812.c #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348.f #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Giant Panda	MODERN SPECIES	1	RAB26 (ENSAMEG00000017794) #10	PKD1 (ENSAMEG00000017756)	TSC2 (ENSAMEG00000017702) #11	ENSAMEG00000024310	NHERF2 (ENSAMEG00000017688) #13	NPW (ENSAMEG00000017686)	ZNF598 (ENSAMEG00000017681) #14	ENSAMEG00000029661	ENSAMEG00000026689 #16	ENSAMEG00000017671 #17	ENSAMEG00000031000 #17	TBL3 (ENSAMEG00000017654) #18	RNF151 (ENSAMEG00000017653) #19	RPS2 (ENSAMEG00000007366) ##20	NDUFB10 (ENSAMEG00000008522) #21	RPL3L (ENSAMEG00000008489) #22	MSRB1 (ENSAMEG00000008487) #23	ENSAMEG00000025433 #24	ENSAMEG00000008475 #25	FAHD1 (ENSAMEG00000018730)	IGFALS (ENSAMEG00000008445) #26	NUBP2 (ENSAMEG00000008409) #27	SPSB3 (ENSAMEG00000008400) #28	EME2 (ENSAMEG00000008393) #29	MRPS34 (ENSAMEG00000031331) #30	ENSAMEG00000024318 #31	MAPK8IP3 (ENSAMEG00000008238) #32	JPT2 (ENSAMEG00000008232) #33	CRAMP1 (ENSAMEG00000008213) #34	IFT140 (ENSAMEG00000008128) #36	ENSAMEG00000008206 #35
Ursus	ANCESTRAL SPECIES	9	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000169534	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812.c #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.a.b.b ##20	ENSGT00390000006348.f #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678.e #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Polar bear	MODERN SPECIES	200	BRICD5 (ENSUMAG00000022316)	MLST8 (ENSUMAG00000022311) #7	ENSUMAG00000022302	RAB26 (ENSUMAG00000022292) #10	TSC2 (ENSUMAG00000022263) #11	ENSUMAG00000022259	NTHL1 (ENSUMAG00000022257) #12	ENSUMAG00000022255 #13	ZNF598 (ENSUMAG00000022253) #14	GFER (ENSUMAG00000022251) #16	NOXO1 (ENSUMAG00000022239) #17	TBL3 (ENSUMAG00000022149) #18	RNF151 (ENSUMAG00000022133) #19	RPS2 (ENSUMAG00000022123) ##20	NDUFB10 (ENSUMAG00000022118) #21	RPL3L (ENSUMAG00000022104) #22	ENSUMAG00000022090 #23	ENSUMAG00000022070 #25	FAHD1 (ENSUMAG00000022065)	HAGH (ENSUMAG00000022061)	NUBP2 (ENSUMAG00000022054) #27	SPSB3 (ENSUMAG00000022049) #28	MAPK8IP3 (ENSUMAG00000021776) #32	JPT2 (ENSUMAG00000021688) #33	CRAMP1 (ENSUMAG00000021635) #34	TMEM204 (ENSUMAG00000021614) #35	IFT140 (ENSUMAG00000021605) #36	TELO2 (ENSUMAG00000021492) #37	PTX4 (ENSUMAG00000021453)	CLCN7 (ENSUMAG00000021373)	ENSUMAG00000021354
American black bear	MODERN SPECIES	4606										NOXO1 (ENSUAMG00000019237) #17	TBL3 (ENSUAMG00000019276) #18	RNF151 (ENSUAMG00000019278) #19	ENSUAMG00000019281 ##20	ENSUAMG00000019317	NDUFB10 (ENSUAMG00000019319) #21	RPL3L (ENSUAMG00000019320) #22	ENSUAMG00000019323 #23	HS3ST6 (ENSUAMG00000019324) #24
Laurasiatheria_c	ANCESTRAL SPECIES	12	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Chiroptera	ANCESTRAL SPECIES	12	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Microchiroptera	ANCESTRAL SPECIES	17	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Greater horseshoe bat	MODERN SPECIES	47	RAB26 (ENSRFEG00010021426) #10	PKD1 (ENSRFEG00010021355)	TSC2 (ENSRFEG00010021226) #11	NTHL1 (ENSRFEG00010021165) #12	NHERF2 (ENSRFEG00010021131) #13	ENSRFEG00010021115	ZNF598 (ENSRFEG00010021099) #14	SYNGR3 (ENSRFEG00010021081)	ENSRFEG00010021061 #16	NOXO1 (ENSRFEG00010021044) #17	TBL3 (ENSRFEG00010020999) #18	ENSRFEG00010020973	RNF151 (ENSRFEG00010020958) #19	RPS2 (ENSRFEG00010020920) ##20	NDUFB10 (ENSRFEG00010020889) #21	RPL3L (ENSRFEG00010020862) #22	MSRB1 (ENSRFEG00010020839) #23	HS3ST6 (ENSRFEG00010020816) #24	ENSRFEG00010020743 #25	FAHD1 (ENSRFEG00010020709)	HAGH (ENSRFEG00010020660)	IGFALS (ENSRFEG00010020626) #26	NUBP2 (ENSRFEG00010020577) #27	SPSB3 (ENSRFEG00010020550) #28	EME2 (ENSRFEG00010020532) #29	MRPS34 (ENSRFEG00010020489) #30	MAPK8IP3 (ENSRFEG00010020345) #32	JPT2 (ENSRFEG00010020239) #33	CRAMP1 (ENSRFEG00010020192) #34	TMEM204 (ENSRFEG00010020163) #35	IFT140 (ENSRFEG00010020088) #36
Microbat	MODERN SPECIES	1269	MLST8 (ENSMLUG00000003950) #7	CASKIN1 (ENSMLUG00000004298) #8	TRAF7 (ENSMLUG00000004287) #9	PKD1 (ENSMLUG00000004260)	TSC2 (ENSMLUG00000004241) #11	NTHL1 (ENSMLUG00000004234) #12	NHERF2 (ENSMLUG00000005825) #13	ZNF598 (ENSMLUG00000004224) #14	ENSMLUG00000028770	GFER (ENSMLUG00000030630) #16	NOXO1 (ENSMLUG00000011725) #17	TBL3 (ENSMLUG00000011684) #18	RNF151 (ENSMLUG00000011679) #19	ENSMLUG00000011660 ##20	ENSMLUG00000011655 #21	RPL3L (ENSMLUG00000011638) #22	MSRB1 (ENSMLUG00000011634) #23	HS3ST6 (ENSMLUG00000011625) #24	ENSMLUG00000000791 #25	FAHD1 (ENSMLUG00000000789)	HAGH (ENSMLUG00000000782)	IGFALS (ENSMLUG00000000776) #26	NUBP2 (ENSMLUG00000000768) #27	SPSB3 (ENSMLUG00000028814) #28	EME2 (ENSMLUG00000000758) #29	MRPS34 (ENSMLUG00000028772) #30	NME3 (ENSMLUG00000000754) #31	MAPK8IP3 (ENSMLUG00000000736) #32	JPT2 (ENSMLUG00000000730) #33	CRAMP1 (ENSMLUG00000000709) #34	TMEM204 (ENSMLUG00000010040) #35
Megabat	MODERN SPECIES	3528								ZNF598 (ENSPVAG00000016717) #14	SYNGR3 (ENSPVAG00000016716)	GFER (ENSPVAG00000016715) #16	NOXO1 (ENSPVAG00000016714) #17	TBL3 (ENSPVAG00000016710) #18	RNF151 (ENSPVAG00000016706) #19	RPS2 (ENSPVAG00000016704) ##20	NDUFB10 (ENSPVAG00000016701) #21	RPL3L (ENSPVAG00000016699) #22	ENSPVAG00000016697 #23	HS3ST6 (ENSPVAG00000016696) #24	ENSPVAG00000016695 #25	HAGH (ENSPVAG00000016691)	NUBP2 (ENSPVAG00000016689) #27	SPSB3 (ENSPVAG00000016687) #28	EME2 (ENSPVAG00000016683) #29	MRPS34 (ENSPVAG00000016682) #30	NME3 (ENSPVAG00000016681) #31	MAPK8IP3 (ENSPVAG00000016674) #32	JPT2 (ENSPVAG00000016673) #33	CRAMP1 (ENSPVAG00000016669) #34	ENSPVAG00000016665	TMEM204 (ENSPVAG00000016663) #35	IFT140 (ENSPVAG00000016662) #36
Equus	ANCESTRAL SPECIES	32	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Donkey	MODERN SPECIES	5	TRAF7 (ENSEASG00005004810) #9	RAB26 (ENSEASG00005025128) #10	TSC2 (ENSEASG00005004724) #11	NTHL1 (ENSEASG00005004702) #12	NHERF2 (ENSEASG00005004685) #13	ENSEASG00005004672	ZNF598 (ENSEASG00005004666) #14	SYNGR3 (ENSEASG00005004661)	ENSEASG00005004659 #16	NOXO1 (ENSEASG00005004653) #17	TBL3 (ENSEASG00005004649) #18	ENSEASG00005025509 #19	RPS2 (ENSEASG00005004630) ##20	NDUFB10 (ENSEASG00005028164) #21	ENSEASG00005033190	RPL3L (ENSEASG00005009140) #22	HS3ST6 (ENSEASG00005004607) #24	ENSEASG00005015561	ENSEASG00005004600 #25	FAHD1 (ENSEASG00005030060)	HAGH (ENSEASG00005004592)	IGFALS (ENSEASG00005004586) #26	NUBP2 (ENSEASG00005035230) #27	SPSB3 (ENSEASG00005026398) #28	ENSEASG00005025437 #29	ENSEASG00005025961 #30	NME3 (ENSEASG00005035536) #31	ENSEASG00005001955 #32	ENSEASG00005034484 #32	ENSEASG00005038396 #32	JPT2 (ENSEASG00005025904) #33
Horse	MODERN SPECIES	4	TRAF7 (ENSECAG00000017744) #9	PKD1 (ENSECAG00000006899)	RAB26 (ENSECAG00000020903) #10	TSC2 (ENSECAG00000021222) #11	NTHL1 (ENSECAG00000012595) #12	NHERF2 (ENSECAG00000013367) #13	NPW (ENSECAG00000030307)	ZNF598 (ENSECAG00000014058) #14	SYNGR3 (ENSECAG00000015298)	GFER (ENSECAG00000036054) #16	NOXO1 (ENSECAG00000017619) #17	TBL3 (ENSECAG00000019299) #18	RNF151 (ENSECAG00000008953) #19	RPS2 (ENSECAG00000009065) ##20	NDUFB10 (ENSECAG00000020610) #21	RPL3L (ENSECAG00000020632) #22	HS3ST6 (ENSECAG00000000862) #24	MEIOB (ENSECAG00000001005) #25	ENSECAG00000057961	FAHD1 (ENSECAG00000004353)	HAGH (ENSECAG00000005471)	IGFALS (ENSECAG00000039211) #26	NUBP2 (ENSECAG00000012545) #27	SPSB3 (ENSECAG00000013413) #28	EME2 (ENSECAG00000016045) #29	MRPS34 (ENSECAG00000016370) #30	NME3 (ENSECAG00000038477) #31	MAPK8IP3 (ENSECAG00000016379) #32	JPT2 (ENSECAG00000026941) #33	CRAMP1 (ENSECAG00000023299) #34	IFT140 (ENSECAG00000009031) #36
Artiodactyla	ANCESTRAL SPECIES	10	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Suina	ANCESTRAL SPECIES	28	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A.db #36
Chacoan peccary	MODERN SPECIES	848							NHERF2 (ENSCWAG00000021621) #13	NPW (ENSCWAG00000021629)	ZNF598 (ENSCWAG00000021631) #14	SYNGR3 (ENSCWAG00000009366)	GFER (ENSCWAG00000009406) #16	NOXO1 (ENSCWAG00000009428) #17	RNF151 (ENSCWAG00000009774) #19	ENSCWAG00000009812 ##20	NDUFB10 (ENSCWAG00000009923) #21	RPL3L (ENSCWAG00000009981) #22	MSRB1 (ENSCWAG00000010076) #23	HS3ST6 (ENSCWAG00000010100) #24	ENSCWAG00000010137 #25	FAHD1 (ENSCWAG00000010358)	HAGH (ENSCWAG00000010381)	IGFALS (ENSCWAG00000010469) #26	NUBP2 (ENSCWAG00000010505) #27	SPSB3 (ENSCWAG00000010677) #28	EME2 (ENSCWAG00000010752) #29	MRPS34 (ENSCWAG00000010813) #30	NME3 (ENSCWAG00000010828) #31	ENSCWAG00000010875 #32
Pig	MODERN SPECIES	11	TRAF7 (ENSSSCG00000008043) #9	RAB26 (ENSSSCG00000033691) #10	PKD1 (ENSSSCG00000008041)	TSC2 (ENSSSCG00000008040) #11	NTHL1 (ENSSSCG00000008039) #12	NHERF2 (ENSSSCG00000008038) #13	NPW (ENSSSCG00000048627)	ZNF598 (ENSSSCG00000023400) #14	SYNGR3 (ENSSSCG00000008036)	ENSSSCG00000008035 #16	NOXO1 (ENSSSCG00000008034) #17	TBL3 (ENSSSCG00000037686) #18	RNF151 (ENSSSCG00000034728) #19	ENSSSCG00000033697 ##20	NDUFB10 (ENSSSCG00000030328) #21	RPL3L (ENSSSCG00000032657) #22	MSRB1 (ENSSSCG00000032932) #23	HS3ST6 (ENSSSCG00000031216) #24	ENSSSCG00000025711 #25	ENSSSCG00000008012	FAHD1 (ENSSSCG00000039715)	IGFALS (ENSSSCG00000008013) #26	NUBP2 (ENSSSCG00000008014) #27	SPSB3 (ENSSSCG00000039024) #28	EME2 (ENSSSCG00000021467) #29	MRPS34 (ENSSSCG00000008016) #30	NME3 (ENSSSCG00000008017) #31	MAPK8IP3 (ENSSSCG00000008018) #32	JPT2 (ENSSSCG00000008019) #33	CRAMP1 (ENSSSCG00000008026) #34	IFT140 (ENSSSCG00000008020) #36
Artiodactyla_a	ANCESTRAL SPECIES	10	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Camelidae	ANCESTRAL SPECIES	33	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Arabian camel	MODERN SPECIES	41	TRAF7 (ENSCDRG00005015066) #9	RAB26 (ENSCDRG00005014973) #10	PKD1 (ENSCDRG00005014572)	TSC2 (ENSCDRG00005013847) #11	NTHL1 (ENSCDRG00005013746) #12	NHERF2 (ENSCDRG00005013637) #13	NPW (ENSCDRG00005013571)	ZNF598 (ENSCDRG00005013508) #14	SYNGR3 (ENSCDRG00005013426)	GFER (ENSCDRG00005013367) #16	NOXO1 (ENSCDRG00005013253) #17	TBL3 (ENSCDRG00005013168) #18	RNF151 (ENSCDRG00005013092) #19	RPS2 (ENSCDRG00005012917) ##20	NDUFB10 (ENSCDRG00005012823) #21	RPL3L (ENSCDRG00005012772) #22	MSRB1 (ENSCDRG00005012709) #23	HS3ST6 (ENSCDRG00005012599) #24	ENSCDRG00005012343 #25	FAHD1 (ENSCDRG00005012307)	HAGH (ENSCDRG00005012164)	IGFALS (ENSCDRG00005012131) #26	NUBP2 (ENSCDRG00005012000) #27	SPSB3 (ENSCDRG00005011937) #28	EME2 (ENSCDRG00005011861) #29	MRPS34 (ENSCDRG00005011817) #30	NME3 (ENSCDRG00005011755) #31	MAPK8IP3 (ENSCDRG00005011576) #32	JPT2 (ENSCDRG00005011470) #33	CRAMP1 (ENSCDRG00005011383) #34	TMEM204 (ENSCDRG00005011342) #35
Artiodactyla_b	ANCESTRAL SPECIES	9	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Cetacea	ANCESTRAL SPECIES	3	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Odontoceti	ANCESTRAL SPECIES	3	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Odontoceti_a	ANCESTRAL SPECIES	3	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Dolphin	MODERN SPECIES	2804								ZNF598 (ENSTTRG00000011402) #14	SYNGR3 (ENSTTRG00000011401)	GFER (ENSTTRG00000011400) #16	NOXO1 (ENSTTRG00000011396) #17	TBL3 (ENSTTRG00000011395) #18	RNF151 (ENSTTRG00000011394) #19	RPS2 (ENSTTRG00000011393) ##20	NDUFB10 (ENSTTRG00000011392) #21	RPL3L (ENSTTRG00000011391) #22	ENSTTRG00000011390 #23	HS3ST6 (ENSTTRG00000011389) #24	ENSTTRG00000011388 #25	FAHD1 (ENSTTRG00000011387)	HAGH (ENSTTRG00000011386)	IGFALS (ENSTTRG00000011385) #26	NUBP2 (ENSTTRG00000011384) #27	SPSB3 (ENSTTRG00000011383) #28	EME2 (ENSTTRG00000011382) #29	MRPS34 (ENSTTRG00000011381) #30	NME3 (ENSTTRG00000011380) #31	MAPK8IP3 (ENSTTRG00000011379) #32	HN1L (ENSTTRG00000011377) #33	CRAMP1 (ENSTTRG00000011376) #34	ENSTTRG00000011369
Odontoceti_b	ANCESTRAL SPECIES	3	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Monodontidae	ANCESTRAL SPECIES	1	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b.l ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Beluga whale	MODERN SPECIES	48	CASKIN1 (ENSDLEG00000012786) #8	TRAF7 (ENSDLEG00000012439) #9	RAB26 (ENSDLEG00000012293) #10	TSC2 (ENSDLEG00000007869) #11	NTHL1 (ENSDLEG00000007751) #12	NHERF2 (ENSDLEG00000007744) #13	NPW (ENSDLEG00000007742)	ZNF598 (ENSDLEG00000007731) #14	SYNGR3 (ENSDLEG00000007709)	ENSDLEG00000007706 #16	NOXO1 (ENSDLEG00000007696) #17	TBL3 (ENSDLEG00000007683) #18	ENSDLEG00000007673 #19	RPS2 (ENSDLEG00000007664) ##20	NDUFB10 (ENSDLEG00000007659) #21	RPL3L (ENSDLEG00000007645) #22	MSRB1 (ENSDLEG00000007639) #23	HS3ST6 (ENSDLEG00000007636) #24	MEIOB (ENSDLEG00000007627) #25	FAHD1 (ENSDLEG00000007618)	HAGH (ENSDLEG00000007559)	IGFALS (ENSDLEG00000007530) #26	ENSDLEG00000007525 #27	SPSB3 (ENSDLEG00000007517) #28	MRPS34 (ENSDLEG00000007513) #30	NME3 (ENSDLEG00000007506) #31	MAPK8IP3 (ENSDLEG00000007432) #32	JPT2 (ENSDLEG00000007393) #33	CRAMP1 (ENSDLEG00000007347) #34	TMEM204 (ENSDLEG00000007342) #35	IFT140 (ENSDLEG00000007323) #36
Narwhal	MODERN SPECIES	299	CASKIN1 (ENSMMNG00015006590) #8	TRAF7 (ENSMMNG00015006526) #9	RAB26 (ENSMMNG00015006487) #10	TSC2 (ENSMMNG00015005139) #11	NTHL1 (ENSMMNG00015004918) #12	NHERF2 (ENSMMNG00015004903) #13	NPW (ENSMMNG00015004892)	ZNF598 (ENSMMNG00015004887) #14	SYNGR3 (ENSMMNG00015004877)	GFER (ENSMMNG00015003991) #16	NOXO1 (ENSMMNG00015003977) #17	TBL3 (ENSMMNG00015003946) #18	RNF151 (ENSMMNG00015003919) #19	ENSMMNG00015003862 ##20	NDUFB10 (ENSMMNG00015003819) #21	RPL3L (ENSMMNG00015003791) #22	MSRB1 (ENSMMNG00015003761) #23	HS3ST6 (ENSMMNG00015003744) #24	ENSMMNG00015003718 #25	FAHD1 (ENSMMNG00015003677)	HAGH (ENSMMNG00015003649)	IGFALS (ENSMMNG00015003621) #26	NUBP2 (ENSMMNG00015003598) #27	SPSB3 (ENSMMNG00015003567) #28	ENSMMNG00015003543	MRPS34 (ENSMMNG00015003531) #30	NME3 (ENSMMNG00015003514) #31	ENSMMNG00015003486 #32	JPT2 (ENSMMNG00015003456) #33	CRAMP1 (ENSMMNG00015003411) #34	TMEM204 (ENSMMNG00015003375) #35
Vaquita	MODERN SPECIES	6	CASKIN1 (ENSPSNG00000016418) #8	TRAF7 (ENSPSNG00000016265) #9	RAB26 (ENSPSNG00000016117) #10	TSC2 (ENSPSNG00000012396) #11	NTHL1 (ENSPSNG00000012170) #12	NHERF2 (ENSPSNG00000011996) #13	NPW (ENSPSNG00000011925)	ZNF598 (ENSPSNG00000011838) #14	SYNGR3 (ENSPSNG00000011768)	GFER (ENSPSNG00000011731) #16	NOXO1 (ENSPSNG00000011544) #17	TBL3 (ENSPSNG00000011502) #18	RNF151 (ENSPSNG00000011420) #19	RPS2 (ENSPSNG00000011290) ##20	NDUFB10 (ENSPSNG00000011191) #21	RPL3L (ENSPSNG00000011070) #22	MSRB1 (ENSPSNG00000011031) #23	HS3ST6 (ENSPSNG00000011004) #24	ENSPSNG00000010896 #25	FAHD1 (ENSPSNG00000010819)	HAGH (ENSPSNG00000010692)	IGFALS (ENSPSNG00000010635) #26	NUBP2 (ENSPSNG00000010556) #27	SPSB3 (ENSPSNG00000010505) #28	MRPS34 (ENSPSNG00000010465) #30	NME3 (ENSPSNG00000010342) #31	MAPK8IP3 (ENSPSNG00000010221) #32	JPT2 (ENSPSNG00000010117) #33	CRAMP1 (ENSPSNG00000009750) #34	TMEM204 (ENSPSNG00000009646) #35	IFT140 (ENSPSNG00000009483) #36
Sperm whale	MODERN SPECIES	282								ZNF598 (ENSPCTG00005021435) #14	SYNGR3 (ENSPCTG00005021486)	GFER (ENSPCTG00005021511) #16	NOXO1 (ENSPCTG00005021529) #17	TBL3 (ENSPCTG00005021582) #18	RNF151 (ENSPCTG00005021609) #19	ENSPCTG00005021651 ##20	NDUFB10 (ENSPCTG00005021701) #21	RPL3L (ENSPCTG00005021738) #22	MSRB1 (ENSPCTG00005021766) #23
Blue whale	MODERN SPECIES	6	TRAF7 (ENSBMSG00010011706) #9	RAB26 (ENSBMSG00010011665) #10	ENSBMSG00010011658	TSC2 (ENSBMSG00010011197) #11	NTHL1 (ENSBMSG00010011060) #12	NHERF2 (ENSBMSG00010011027) #13	NPW (ENSBMSG00010011009)	ENSBMSG00010011003	ENSBMSG00010010978	GFER (ENSBMSG00010010965) #16	NOXO1 (ENSBMSG00010010936) #17	TBL3 (ENSBMSG00010010856) #18	RNF151 (ENSBMSG00010010820) #19	ENSBMSG00010010763 ##20	NDUFB10 (ENSBMSG00010010734) #21	RPL3L (ENSBMSG00010010716) #22	MSRB1 (ENSBMSG00010010701) #23	HS3ST6 (ENSBMSG00010010685) #24	ENSBMSG00010010669 #25	FAHD1 (ENSBMSG00010010608)	HAGH (ENSBMSG00010010591)	IGFALS (ENSBMSG00010010573) #26	NUBP2 (ENSBMSG00010010561) #27	SPSB3 (ENSBMSG00010010546) #28	MRPS34 (ENSBMSG00010010537) #30	NME3 (ENSBMSG00010010525) #31	ENSBMSG00010010504 #32	JPT2 (ENSBMSG00010010484) #33	CRAMP1 (ENSBMSG00010010410) #34	TMEM204 (ENSBMSG00010010376) #35	IFT140 (ENSBMSG00010010364) #36
Pecora	ANCESTRAL SPECIES	10	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Yarkand deer	MODERN SPECIES	1	TRAF7 (ENSCHYG00000003309) #9	RAB26 (ENSCHYG00000003262) #10	PKD1 (ENSCHYG00000003197)	TSC2 (ENSCHYG00000002897) #11	NTHL1 (ENSCHYG00000002795) #12	NHERF2 (ENSCHYG00000002724) #13	ENSCHYG00000002707	ZNF598 (ENSCHYG00000002665) #14	SYNGR3 (ENSCHYG00000002600)	GFER (ENSCHYG00000002589) #16	NOXO1 (ENSCHYG00000002547) #17	TBL3 (ENSCHYG00000002506) #18	RNF151 (ENSCHYG00000002494) #19	ENSCHYG00000002454 ##20	NDUFB10 (ENSCHYG00000002424) #21	RPL3L (ENSCHYG00000002392) #22	MSRB1 (ENSCHYG00000002367) #23	HS3ST6 (ENSCHYG00000002357) #24	ENSCHYG00000002342 #25	FAHD1 (ENSCHYG00000002322)	HAGH (ENSCHYG00000002161)	IGFALS (ENSCHYG00000002142) #26	NUBP2 (ENSCHYG00000002104) #27	ENSCHYG00000002081 #28	ENSCHYG00000002065 #29	MRPS34 (ENSCHYG00000002055) #30	NME3 (ENSCHYG00000002029) #31	ENSCHYG00000002013 #32	ENSCHYG00000002004 #32	ENSCHYG00000001980 #33	CRAMP1 (ENSCHYG00000001817) #34
Percora_a	ANCESTRAL SPECIES	9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Siberian musk deer	MODERN SPECIES		TRAF7 (ENSMMSG00000000389) #9	RAB26 (ENSMMSG00000000455) #10	PKD1 (ENSMMSG00000000501)	TSC2 (ENSMMSG00000000618) #11	NTHL1 (ENSMMSG00000000870) #12	NHERF2 (ENSMMSG00000000918) #13	NPW (ENSMMSG00000000978)	ZNF598 (ENSMMSG00000000995) #14	ENSMMSG00000001029 #15	GFER (ENSMMSG00000001094) #16	NOXO1 (ENSMMSG00000001117) #17	TBL3 (ENSMMSG00000001169) #18	RNF151 (ENSMMSG00000001215) #19	ENSMMSG00000001250 ##20	NDUFB10 (ENSMMSG00000001294) #21	RPL3L (ENSMMSG00000001316) #22	MSRB1 (ENSMMSG00000001336) #23	HS3ST6 (ENSMMSG00000001346) #24	ENSMMSG00000001365 #25	FAHD1 (ENSMMSG00000001429)	HAGH (ENSMMSG00000001440)	IGFALS (ENSMMSG00000001466) #26	NUBP2 (ENSMMSG00000001476) #27	SPSB3 (ENSMMSG00000001495) #28	EME2 (ENSMMSG00000001510) #29	ENSMMSG00000001526 #30	NME3 (ENSMMSG00000001535) #31	MAPK8IP3 (ENSMMSG00000001572) #32	ENSMMSG00000001612	JPT2 (ENSMMSG00000001637) #33	CRAMP1 (ENSMMSG00000001672) #34
Bovidae	ANCESTRAL SPECIES	11	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Caprinae	ANCESTRAL SPECIES	7	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Rambouillet Sheep	MODERN SPECIES	16	CASKIN1 (ENSOARG00020026131) #8	TRAF7 (ENSOARG00020026127) #9	RAB26 (ENSOARG00020026123) #10	TSC2 (ENSOARG00020014978) #11	NTHL1 (ENSOARG00020014040) #12	NHERF2 (ENSOARG00020013748) #13	ENSOARG00020013690	ZNF598 (ENSOARG00020013567) #14	SYNGR3 (ENSOARG00020013539)	GFER (ENSOARG00020026345) #16	NOXO1 (ENSOARG00020026343) #17	TBL3 (ENSOARG00020026339) #18	RNF151 (ENSOARG00020026336) #19	ENSOARG00020026326 ##20	NDUFB10 (ENSOARG00020026321) #21	RPL3L (ENSOARG00020026318) #22	MSRB1 (ENSOARG00020026316) #23	HS3ST6 (ENSOARG00020026315) #24	ENSOARG00020026311 #25	FAHD1 (ENSOARG00020026309)	HAGH (ENSOARG00020026306)	IGFALS (ENSOARG00020026302) #26	NUBP2 (ENSOARG00020026299) #27	SPSB3 (ENSOARG00020026298) #28	EME2 (ENSOARG00020026295) #29	MRPS34 (ENSOARG00020026293) #30	NME3 (ENSOARG00020026291) #31	MAPK8IP3 (ENSOARG00020026283) #32	JPT2 (ENSOARG00020026280) #33	CRAMP1 (ENSOARG00020026270) #34	TMEM204 (ENSOARG00020026266) #35
Goat	MODERN SPECIES	17	TRAF7 (ENSCHIG00000011495) #9	RAB26 (ENSCHIG00000017901) #10	PKD1 (ENSCHIG00000016351)	TSC2 (ENSCHIG00000014230) #11	NTHL1 (ENSCHIG00000014718) #12	NHERF2 (ENSCHIG00000016518) #13	ZNF598 (ENSCHIG00000013018) #14	SYNGR3 (ENSCHIG00000016715)	GFER (ENSCHIG00000006049) #16	NOXO1 (ENSCHIG00000019635) #17	TBL3 (ENSCHIG00000007747) #18	RNF151 (ENSCHIG00000015860) #19	ENSCHIG00000022194 ##20	NDUFB10 (ENSCHIG00000017852) #21	MSRB1 (ENSCHIG00000018373) #23	RPL3L (ENSCHIG00000020352) #22	HS3ST6 (ENSCHIG00000019888) #24	ENSCHIG00000013357 #25	FAHD1 (ENSCHIG00000007917)	HAGH (ENSCHIG00000022722)	IGFALS (ENSCHIG00000005524) #26	NUBP2 (ENSCHIG00000024194) #27	SPSB3 (ENSCHIG00000024292) #28	MRPS34 (ENSCHIG00000026940) #30	NME3 (ENSCHIG00000020916) #31	MAPK8IP3 (ENSCHIG00000020649) #32	JPT2 (ENSCHIG00000009778) #33	CRAMP1 (ENSCHIG00000001484) #34	TMEM204 (ENSCHIG00000008739) #35	IFT140 (ENSCHIG00000017137) #36	TELO2 (ENSCHIG00000012866) #37
Bovinae	ANCESTRAL SPECIES	7	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00990000213154	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Bos	ANCESTRAL SPECIES	9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Bos_b	ANCESTRAL SPECIES	6	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35
Hybrid Bos Indicus	MODERN SPECIES	17	RAB26 (ENSBIXG00005029866) #10	PKD1 (ENSBIXG00005029892)	TSC2 (ENSBIXG00005030003) #11	ENSBIXG00005030106	NTHL1 (ENSBIXG00005030114) #12	NHERF2 (ENSBIXG00005030135) #13	ENSBIXG00005030154	ZNF598 (ENSBIXG00005030165) #14	ENSBIXG00005030188	ENSBIXG00005030201 #16	TBL3 (ENSBIXG00005030213) #18	NOXO1 (ENSBIXG00005030231) #17	RNF151 (ENSBIXG00005030248) #19	ENSBIXG00005030271 ##20	NDUFB10 (ENSBIXG00005030305) #21	RPL3L (ENSBIXG00005030313) #22	MSRB1 (ENSBIXG00005030323) #23	HS3ST6 (ENSBIXG00005005277) #24	ENSBIXG00005005270 #25	FAHD1 (ENSBIXG00005029225)	HAGH (ENSBIXG00005029215)	IGFALS (ENSBIXG00005001646) #26	EME2 (ENSBIXG00005029199) #29	SPSB3 (ENSBIXG00005001778) #28	ENSBIXG00005001802 #30	NME3 (ENSBIXG00005005200) #31	MAPK8IP3 (ENSBIXG00005029132) #32	ENSBIXG00005029057	JPT2 (ENSBIXG00005005130) #33	ENSBIXG00005029033	CRAMP1 (ENSBIXG00005029023) #34
Cow	MODERN SPECIES	17	CASKIN1 (ENSBTAG00000037945) #8	TRAF7 (ENSBTAG00000019073) #9	RAB26 (ENSBTAG00000000279) #10	TSC2 (ENSBTAG00000020617) #11	NTHL1 (ENSBTAG00000006272) #12	NHERF2 (ENSBTAG00000013479) #13	ENSBTAG00000054368	ZNF598 (ENSBTAG00000001023) #14	SYNGR3 (ENSBTAG00000008504)	GFER (ENSBTAG00000017631) #16	NOXO1 (ENSBTAG00000020369) #17	TBL3 (ENSBTAG00000020366) #18	RNF151 (ENSBTAG00000009536) #19	RPS2 (ENSBTAG00000009535) ##20	NDUFB10 (ENSBTAG00000009534) #21	RPL3L (ENSBTAG00000009533) #22	MSRB1 (ENSBTAG00000049306) #23	HS3ST6 (ENSBTAG00000019249) #24	MEIOB (ENSBTAG00000020001) #25	FAHD1 (ENSBTAG00000033015)	HAGH (ENSBTAG00000019998)	IGFALS (ENSBTAG00000033299) #26	NUBP2 (ENSBTAG00000016561) #27	SPSB3 (ENSBTAG00000016558) #28	EME2 (ENSBTAG00000016553) #29	MRPS34 (ENSBTAG00000026415) #30	NME3 (ENSBTAG00000016552) #31	ENSBTAG00000052060	MAPK8IP3 (ENSBTAG00000002211) #32	JPT2 (ENSBTAG00000002209) #33	CRAMP1 (ENSBTAG00000002202) #34
Bos_a	ANCESTRAL SPECIES	13	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.b.e ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Wild yak	MODERN SPECIES	26									ENSBMUG00000017742	GFER (ENSBMUG00000017765) #16	NOXO1 (ENSBMUG00000017821) #17	TBL3 (ENSBMUG00000017851) #18	RNF151 (ENSBMUG00000017871) #19	ENSBMUG00000017908 ##20	NDUFB10 (ENSBMUG00000017948) #21	RPL3L (ENSBMUG00000017984) #22	MSRB1 (ENSBMUG00000018003) #23	HS3ST6 (ENSBMUG00000018022) #24	ENSBMUG00000018062 #25	FAHD1 (ENSBMUG00000018088)	HAGH (ENSBMUG00000018096)	IGFALS (ENSBMUG00000018107) #26	NUBP2 (ENSBMUG00000018133) #27	SPSB3 (ENSBMUG00000018145) #28	EME2 (ENSBMUG00000018170) #29	MRPS34 (ENSBMUG00000018185) #30	ENSBMUG00000018193 #31	MAPK8IP3 (ENSBMUG00000020161) #32	JPT2 (ENSBMUG00000021647) #33	CRAMP1 (ENSBMUG00000021918) #34	IFT140 (ENSBMUG00000022034) #36
Domestic yak	MODERN SPECIES	18	CASKIN1 (ENSBGRG00000020915) #8	TRAF7 (ENSBGRG00000021094) #9	RAB26 (ENSBGRG00000021201) #10	TSC2 (ENSBGRG00000021872) #11	ENSBGRG00000025853 #12	NHERF2 (ENSBGRG00000025867) #13	ENSBGRG00000025882	ZNF598 (ENSBGRG00000025889) #14	SYNGR3 (ENSBGRG00000025907)	GFER (ENSBGRG00000025909) #16	NOXO1 (ENSBGRG00000025916) #17	TBL3 (ENSBGRG00000025925) #18	RNF151 (ENSBGRG00000025932) #19	ENSBGRG00000025950 ##20	NDUFB10 (ENSBGRG00000025973) #21	RPL3L (ENSBGRG00000026001) #22	MSRB1 (ENSBGRG00000026025) #23	HS3ST6 (ENSBGRG00000026037) #24	ENSBGRG00000026058 #25	FAHD1 (ENSBGRG00000026099)	HAGH (ENSBGRG00000026102)	IGFALS (ENSBGRG00000026120) #26	NUBP2 (ENSBGRG00000026125) #27	SPSB3 (ENSBGRG00000026135) #28	EME2 (ENSBGRG00000026143) #29	MRPS34 (ENSBGRG00000026152) #30	NME3 (ENSBGRG00000026159) #31	ENSBGRG00000026167 #32	JPT2 (ENSBGRG00000026177) #33	CRAMP1 (ENSBGRG00000026195) #34	ENSBGRG00000026261 #36
American bison	MODERN SPECIES	1920									ZNF598 (ENSBBBG00000019611) #14	ENSBBBG00000019594	ENSBBBG00000019585 #18	ENSBBBG00000019570	RNF151 (ENSBBBG00000005303) #19	ENSBBBG00000019558 ##20	NDUFB10 (ENSBBBG00000005291) #21	ENSBBBG00000019535 #22	MSRB1 (ENSBBBG00000009193) #23
Atlantogenata	ANCESTRAL SPECIES	32	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36
Xenarthra	ANCESTRAL SPECIES	177													ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.b ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160824 #26	ENSGT00940000160452	ENSGT00940000159176	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00390000007652.h #33	ENSGT00390000003337 #34	ENSGT00940000153417.A #36	ENSGT00390000015528 #35	ENSGT00390000006698 #37
Armadillo	MODERN SPECIES	1647													RNF151 (ENSDNOG00000041949) #19	ENSDNOG00000042334 ##20	NDUFB10 (ENSDNOG00000003688) #21	RPL3L (ENSDNOG00000018455) #22	HS3ST6 (ENSDNOG00000001759) #24	ENSDNOG00000015418 #25	IGFALS (ENSDNOG00000049797) #26	FAHD1 (ENSDNOG00000031262)	HAGH (ENSDNOG00000038621)	NUBP2 (ENSDNOG00000043662) #27	ENSDNOG00000010374 #28	EME2 (ENSDNOG00000010348) #29	MRPS34 (ENSDNOG00000042503) #30	JPT2 (ENSDNOG00000030881) #33	ENSDNOG00000045712 #34
Afrotheria	ANCESTRAL SPECIES	30	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000006698 #37
Afrotheria_a	ANCESTRAL SPECIES	29	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.b.a.a #20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00530000063937.b #29	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000006698 #37
Hyrax	MODERN SPECIES	6996								ENSPCAG00000002388 #14	SYNGR3 (ENSPCAG00000002354)	GFER (ENSPCAG00000002339) #16	ENSPCAG00000002250 #17	TBL3 (ENSPCAG00000002157) #18	RNF151 (ENSPCAG00000002119) #19	RPS2 (ENSPCAG00000002090) #20	NDUFB10 (ENSPCAG00000002050) #21	RPL3L (ENSPCAG00000002019) #22	ENSPCAG00000001968 #23
Elephant	MODERN SPECIES	442	TRAF7 (ENSLAFG00000015455) #9	RAB26 (ENSLAFG00000021466) #10	PKD1 (ENSLAFG00000015438)	TSC2 (ENSLAFG00000015424) #11	NTHL1 (ENSLAFG00000015421) #12	NHERF2 (ENSLAFG00000004276) #13	ENSLAFG00000022592	ZNF598 (ENSLAFG00000026781) #14	SYNGR3 (ENSLAFG00000026399)	GFER (ENSLAFG00000028685) #16	ENSLAFG00000004707 #17	TBL3 (ENSLAFG00000004699) #18	RNF151 (ENSLAFG00000030860) #19	ENSLAFG00000004696 #20	NDUFB10 (ENSLAFG00000021643) #21	RPL3L (ENSLAFG00000016587) #22	ENSLAFG00000016584 #36	HS3ST6 (ENSLAFG00000001051) #24	ENSLAFG00000008142 #25	FAHD1 (ENSLAFG00000008141)	HAGH (ENSLAFG00000032140)	SPSB3 (ENSLAFG00000028630) #28	ENSLAFG00000023334	MRPS34 (ENSLAFG00000022475) #30	MAPK8IP3 (ENSLAFG00000028194) #32	JPT2 (ENSLAFG00000016324) #33	CRAMP1 (ENSLAFG00000020604) #34	ENSLAFG00000003286 #36	TMEM204 (ENSLAFG00000017196) #35	TELO2 (ENSLAFG00000003284) #37	PTX4 (ENSLAFG00000012669)
Tenrec	MODERN SPECIES	8295																RPL3L (ENSETEG00000016228) #22	ENSETEG00000016226 #23
Marsupialia	ANCESTRAL SPECIES	6	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a ##20	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Marsupialia_b	ANCESTRAL SPECIES	11	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a ##20	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Diprotodontia	ANCESTRAL SPECIES	19	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a ##20	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
Diprotodontia_a	ANCESTRAL SPECIES	21	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00530000063647.A.a #19	ENSGT00940000153095.g.a.c ##20	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000160824 #26	ENSGT00950000183193.A.c.b #27	ENSGT01030000234629.E.a.b #28	ENSGT00390000008964 #30	ENSGT00940000161283 #31	ENSGT00940000153496.a.a #32	ENSGT00390000007652 #33	ENSGT00390000003337 #34	ENSGT00390000015528 #35	ENSGT00940000153417.A #36
koala	MODERN SPECIES	116	CASKIN1 (ENSPCIG00000024999) #8	TRAF7 (ENSPCIG00000024997) #9	ENSPCIG00000024992 #10	PKD1 (ENSPCIG00000024981)	TSC2 (ENSPCIG00000021869) #11	NTHL1 (ENSPCIG00000021826) #12	NHERF2 (ENSPCIG00000021822) #13	ZNF598 (ENSPCIG00000021819) #14	SYNGR3 (ENSPCIG00000021817)	ENSPCIG00000021815 #16	ENSPCIG00000033497 #17	TBL3 (ENSPCIG00000021811) #18	RNF151 (ENSPCIG00000021808) #19	ENSPCIG00000021804 ##20	NDUFB10 (ENSPCIG00000021802) #21	RPL3L (ENSPCIG00000021801) #22	MSRB1 (ENSPCIG00000030855) #23	HS3ST6 (ENSPCIG00000017369) #24	ENSPCIG00000017363 #25	FAHD1 (ENSPCIG00000017360)	HAGH (ENSPCIG00000017282)	IGFALS (ENSPCIG00000017281) #26	NUBP2 (ENSPCIG00000017280) #27	SPSB3 (ENSPCIG00000017279) #28	MRPS34 (ENSPCIG00000017278) #30	NME3 (ENSPCIG00000017277) #31	MAPK8IP3 (ENSPCIG00000017276) #32	JPT2 (ENSPCIG00000017275) #33	CRAMP1 (ENSPCIG00000017274) #34	TMEM204 (ENSPCIG00000017273) #35	ENSPCIG00000017270 #36
Common wonbat	MODERN SPECIES	1009	CASKIN1 (ENSVURG00010009916) #8	TRAF7 (ENSVURG00010010481) #9	RAB26 (ENSVURG00010010538) #10	PKD1 (ENSVURG00010010585)	TSC2 (ENSVURG00010010698) #11	NTHL1 (ENSVURG00010010768) #12	NHERF2 (ENSVURG00010010793) #13	ZNF598 (ENSVURG00010010805) #14	SYNGR3 (ENSVURG00010010820)	GFER (ENSVURG00010010826) #16	ENSVURG00010010834 #17	TBL3 (ENSVURG00010010842) #18	RNF151 (ENSVURG00010010857) #19	ENSVURG00010010866 ##20	NDUFB10 (ENSVURG00010010878) #21	RPL3L (ENSVURG00010010888) #22	MSRB1 (ENSVURG00010010897) #23	ENSVURG00010010904 #24	ENSVURG00010010911 #25	HAGH (ENSVURG00010010956)	FAHD1 (ENSVURG00010011002)	IGFALS (ENSVURG00010011011) #26	NUBP2 (ENSVURG00010011022) #27	SPSB3 (ENSVURG00010011033) #28	MRPS34 (ENSVURG00010011039) #30	NME3 (ENSVURG00010011044) #31	MAPK8IP3 (ENSVURG00010011078) #32	CRAMP1 (ENSVURG00010011179) #34	IFT140 (ENSVURG00010011205) #36	TMEM204 (ENSVURG00010011226) #35	TELO2 (ENSVURG00010011232) #37
Wallaby	MODERN SPECIES	4839														RPS2 (ENSMEUG00000004508) ##20	NDUFB10 (ENSMEUG00000004490) #21	ENSMEUG00000004476 #22
Tasmanian devil	MODERN SPECIES		CASKIN1 (ENSSHAG00000029778) #8	TRAF7 (ENSSHAG00000016612) #9	RAB26 (ENSSHAG00000016484) #10	PKD1 (ENSSHAG00000016120)	TSC2 (ENSSHAG00000015973) #11	NTHL1 (ENSSHAG00000015898) #12	NHERF2 (ENSSHAG00000021249) #13	ZNF598 (ENSSHAG00000015524) #14	SYNGR3 (ENSSHAG00000015500)	ENSSHAG00000029752 #16	ENSSHAG00000015285 #17	TBL3 (ENSSHAG00000015266) #18	RNF151 (ENSSHAG00000015257) #19	RPS2 (ENSSHAG00000015213) ##20	NDUFB10 (ENSSHAG00000015191) #21	RPL3L (ENSSHAG00000021316) #22	MSRB1 (ENSSHAG00000029584) #23	HS3ST6 (ENSSHAG00000009243) #24	ENSSHAG00000013736 #25	FAHD1 (ENSSHAG00000013683)	HAGH (ENSSHAG00000023063)	IGFALS (ENSSHAG00000013535) #26	NUBP2 (ENSSHAG00000013485) #27	SPSB3 (ENSSHAG00000013377) #28	MRPS34 (ENSSHAG00000022861) #30	NME3 (ENSSHAG00000023742) #31	MAPK8IP3 (ENSSHAG00000012766) #32	JPT2 (ENSSHAG00000012700) #33	CRAMP1 (ENSSHAG00000012114) #34	TMEM204 (ENSSHAG00000010939) #35	IFT140 (ENSSHAG00000010791) #36
Opossum	MODERN SPECIES	5	TRAF7 (ENSMODG00000015943) #9	RAB26 (ENSMODG00000015950) #10	ENSMODG00000045602	PKD1 (ENSMODG00000016034)	TSC2 (ENSMODG00000016014) #11	NTHL1 (ENSMODG00000016038) #12	NHERF2 (ENSMODG00000016054) #13	ENSMODG00000046523	ZNF598 (ENSMODG00000016063) #14	ENSMODG00000016066	ENSMODG00000049873 #17	TBL3 (ENSMODG00000016091) #18	RNF151 (ENSMODG00000016093) #19	ENSMODG00000016077 ##20	NDUFB10 (ENSMODG00000016095) #21	RPL3L (ENSMODG00000016100) #22	HS3ST6 (ENSMODG00000016042) #24	ENSMODG00000016106 #25	FAHD1 (ENSMODG00000016110)	ENSMODG00000016115	IGFALS (ENSMODG00000016108) #26	NUBP2 (ENSMODG00000016119) #27	SPSB3 (ENSMODG00000016123) #28	ENSMODG00000016134 #31	MAPK8IP3 (ENSMODG00000016149) #32	JPT2 (ENSMODG00000016153) #33	CRAMP1 (ENSMODG00000016154) #34	TMEM204 (ENSMODG00000016163) #35	IFT140 (ENSMODG00000016160) #36	TELO2 (ENSMODG00000016164) #37	ENSMODG00000016174
Platypus	MODERN SPECIES	13	SMPD4 (ENSOANG00000010539)	ENSOANG00000038990	ENSOANG00000038587	PKD1 (ENSOANG00000049726)	TSC2 (ENSOANG00000009994) #11	NTHL1 (ENSOANG00000000500) #12	NHERF2 (ENSOANG00000037860) #13	ENSOANG00000045564	ZNF598 (ENSOANG00000045210) #14	ENSOANG00000046944	ENSOANG00000049373 #16	ENSOANG00000050062	TBL3 (ENSOANG00000009819) #18	ENSOANG00000040650 #21	RPS2 (ENSOANG00000039911) ##20	RPL3L (ENSOANG00000001892) #22	MSRB1 (ENSOANG00000001860) #23	HS3ST6 (ENSOANG00000002922) #24	ENSOANG00000002921 #25	HAGH (ENSOANG00000002919)	IGFALS (ENSOANG00000028313) #26	NUBP2 (ENSOANG00000046631) #27	SPSB3 (ENSOANG00000015654) #28	MRPS34 (ENSOANG00000050507) #30	ENSOANG00000044345 #31	MAPK8IP3 (ENSOANG00000011871) #32	JPT2 (ENSOANG00000044642) #33	CRAMP1 (ENSOANG00000002915) #34	TMEM204 (ENSOANG00000013655) #35	IFT140 (ENSOANG00000001815) #36	TELO2 (ENSOANG00000001243) #37
Sauria	ANCESTRAL SPECIES	12	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Lepidosauria	ANCESTRAL SPECIES	54	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23
Episquamata	ANCESTRAL SPECIES	8	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000175728	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.b.b	ENSGT00950000182957.b.a.a	ENSGT00940000153514.a.a	ENSGT00940000161924	ENSGT00940000159176	ENSGT00940000160452	ENSGT00390000001723 #25	ENSGT00940000154768.B #24	ENSGT00530000063702.b
Toxicofera	ANCESTRAL SPECIES	62					ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.b.b	ENSGT00950000182957.b.a.a
Elapidae	ANCESTRAL SPECIES	1	ENSGT00940000160374	ENSGT00550000075088.a.a	ENSGT00390000014665	ENSGT00510000048359	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d.e	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651.i #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.b.b	ENSGT00950000182957.b.a.a
Elapidae_a	ANCESTRAL SPECIES	21	ENSGT00940000160374	ENSGT00550000075088.a.a	ENSGT00390000014665	ENSGT00510000048359	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d.e	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651.i #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.a
Acanthophiinae	ANCESTRAL SPECIES	28	ENSGT00940000160374	ENSGT00550000075088.a.a	ENSGT00390000014665	ENSGT00510000048359	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d.e	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651.i #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.a
Mainland tiger snake	MODERN SPECIES	199	KCTD5 (ENSNSUG00000014644)	UBE2I (ENSNSUG00000014645)	TSR3 (ENSNSUG00000014647)	GNPTG (ENSNSUG00000014648)	TSC2 (ENSNSUG00000014649) #11	NTHL1 (ENSNSUG00000015478) #12	NHERF2 (ENSNSUG00000015479) #13	ENSNSUG00000015484	ZNF598 (ENSNSUG00000015485) #14	SYNGR3 (ENSNSUG00000015487)	GFER (ENSNSUG00000015488) #16	NOXO1 (ENSNSUG00000015489) #17	TBL3 (ENSNSUG00000015492) #18	RPS2 (ENSNSUG00000015563) ##20	NDUFB10 (ENSNSUG00000015565) #21	RPL3L (ENSNSUG00000015567) #22	ENSNSUG00000015569	MSRB1 (ENSNSUG00000015572) #23	GNG13 (ENSNSUG00000015574)	CHTF18 (ENSNSUG00000015578)	ENSNSUG00000015579	ENSNSUG00000015580	ENSNSUG00000015582	ENSNSUG00000015583
Eastern brown snake	MODERN SPECIES	24	TSR3 (ENSPTXG00000002135)	GNPTG (ENSPTXG00000002127)	TSC2 (ENSPTXG00000001803) #11	NTHL1 (ENSPTXG00000001755) #12	NHERF2 (ENSPTXG00000001753) #13	ENSPTXG00000001752	ENSPTXG00000001750	ZNF598 (ENSPTXG00000001748) #14	SYNGR3 (ENSPTXG00000001746)	GFER (ENSPTXG00000001744) #16	NOXO1 (ENSPTXG00000001743) #17	TBL3 (ENSPTXG00000001739) #18	ENSPTXG00000001732 ##20	NDUFB10 (ENSPTXG00000001731) #21	ENSPTXG00000001728 ##22	RPL3L (ENSPTXG00000001726) #22	ENSPTXG00000001722	MSRB1 (ENSPTXG00000001719) #23	GNG13 (ENSPTXG00000001716)	CHTF18 (ENSPTXG00000000731)	RPUSD1 (ENSPTXG00000000685)
Blue-lipped sea krait	MODERN SPECIES	5432													ENSLLTG00000014936 #18	RPS2 (ENSLLTG00000014930) ##20	ENSLLTG00000014928 #21	RPL3L (ENSLLTG00000014927) #22
Indian cobra	MODERN SPECIES	15	KCTD5 (ENSNNAG00000011297)	UBE2I (ENSNNAG00000011262)	TSR3 (ENSNNAG00000011229)	ENSNNAG00000011170	TSC2 (ENSNNAG00000010941) #11	NTHL1 (ENSNNAG00000010887) #12	NHERF2 (ENSNNAG00000010855) #13	ENSNNAG00000010844	ZNF598 (ENSNNAG00000010794) #14	SYNGR3 (ENSNNAG00000010666)	GFER (ENSNNAG00000010635) #16	ENSNNAG00000010583 #17	TBL3 (ENSNNAG00000010529) #18	RPS2 (ENSNNAG00000010484) ##20	NDUFB10 (ENSNNAG00000010469) #21	RPL3L (ENSNNAG00000010374) #22	ENSNNAG00000010337	ENSNNAG00000010313 #23	GNG13 (ENSNNAG00000010275)	ENSNNAG00000010204	RPUSD1 (ENSNNAG00000010184)	ENSNNAG00000017816	ENSNNAG00000017811	ENSNNAG00000017805	ENSNNAG00000017803
Lizard	MODERN SPECIES	1256											ENSACAG00000036318	ZNF598 (ENSACAG00000012065) #14	SYNGR3 (ENSACAG00000012083)	ENSACAG00000039716	GFER (ENSACAG00000012106) #16	ENSACAG00000008872 #22	MSLN (ENSACAG00000008929)	ENSACAG00000008931	RPUSD1 (ENSACAG00000008953)	CHTF18 (ENSACAG00000008970)
Laterata	ANCESTRAL SPECIES	23	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979 #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000175728	ENSGT00530000064157.b	ENSGT00550000075029	ENSGT00510000048339	ENSGT00950000182957.b.a.b.b	ENSGT00950000182957.b.a.a	ENSGT00940000153514.a.a	ENSGT00940000161924	ENSGT00940000159176	ENSGT00940000160452	ENSGT00390000001723 #25	ENSGT00940000154768.B #24	ENSGT00530000063702.b
Common wall lizard	MODERN SPECIES	5	TRAF7 (ENSPMRG00000015052) #9	ENSPMRG00000015080	RAB26 (ENSPMRG00000015092) #10	PKD1 (ENSPMRG00000015193)	TSC2 (ENSPMRG00000015822) #11	NTHL1 (ENSPMRG00000017114) #12	NHERF2 (ENSPMRG00000017121) #13	ENSPMRG00000017133	ZNF598 (ENSPMRG00000017142) #14	SYNGR3 (ENSPMRG00000017171)	GFER (ENSPMRG00000017176) #16	ENSPMRG00000017178 #17	TBL3 (ENSPMRG00000017242) #18	ENSPMRG00000017672 ##20	NDUFB10 (ENSPMRG00000017694) #21	RPL3L (ENSPMRG00000017720) #22	ENSPMRG00000017734	ENSPMRG00000017745	MSRB1 (ENSPMRG00000017747) #23	ENSPMRG00000017754	GNG13 (ENSPMRG00000017759)	CHTF18 (ENSPMRG00000017775)	RPUSD1 (ENSPMRG00000017874)	ENSPMRG00000017883	MSLN (ENSPMRG00000017898)	CIAO3 (ENSPMRG00000017907)	ENSPMRG00000017924 #25	FAHD1 (ENSPMRG00000017946)	ENSPMRG00000017950	HS3ST6 (ENSPMRG00000017951) #24	ENSPMRG00000017954
Argentine black and white tegu	MODERN SPECIES	50	RAB26 (ENSSMRG00000016901) #10	PKD1 (ENSSMRG00000016904)	TSC2 (ENSSMRG00000016908) #11	NTHL1 (ENSSMRG00000016922) #12	NHERF2 (ENSSMRG00000016924) #13	EARS2 (ENSSMRG00000016926)	GGA2 (ENSSMRG00000016930)	ENSSMRG00000016932	ZNF598 (ENSSMRG00000016937) #14	SYNGR3 (ENSSMRG00000016938)	ENSSMRG00000016939 #16	ENSSMRG00000016940 #16	TBL3 (ENSSMRG00000016942) #18	RPS2 (ENSSMRG00000016945) ##20	NDUFB10 (ENSSMRG00000016946) #21	RPL3L (ENSSMRG00000016947) #22	ENSSMRG00000016948	MSRB1 (ENSSMRG00000016950) #23	GNG13 (ENSSMRG00000016951)	CHTF18 (ENSSMRG00000016955)	RPUSD1 (ENSSMRG00000016958)	ENSSMRG00000016959	ENSSMRG00000016961	CIAO3 (ENSSMRG00000016964)	HAGHL (ENSSMRG00000016965)	HAGH (ENSSMRG00000016968)	FAHD1 (ENSSMRG00000016970)	ENSSMRG00000016971 #25	HS3ST6 (ENSSMRG00000016973) #24	LMF1 (ENSSMRG00000016975)	SOX8 (ENSSMRG00000016979)
tuatara	MODERN SPECIES	222	BRICD5 (ENSSPUG00000011441)	MLST8 (ENSSPUG00000011455) #7	ENSSPUG00000011474	CASKIN1 (ENSSPUG00000011492) #8	TRAF7 (ENSSPUG00000011519) #9	RAB26 (ENSSPUG00000011571) #10	PKD1 (ENSSPUG00000011765)	TSC2 (ENSSPUG00000012498) #11	NTHL1 (ENSSPUG00000012786) #12	NHERF2 (ENSSPUG00000012853) #13	SYNGR3 (ENSSPUG00000012915)	GFER (ENSSPUG00000012920) #16	TBL3 (ENSSPUG00000012939) #18	ENSSPUG00000013020 ##20	NDUFB10 (ENSSPUG00000013110) #21	RPL3L (ENSSPUG00000013119) #22	MSRB1 (ENSSPUG00000013134) #23
Archelosauria	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Cryptodira	ANCESTRAL SPECIES	12	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Testudinoidea	ANCESTRAL SPECIES	6	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a.c	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Emydidae	ANCESTRAL SPECIES	12	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000158204.b	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.g.b.b ##20	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a.c	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00940000167465	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
painted turtle	MODERN SPECIES	2421	CASKIN1 (ENSCPBG00000001359) #8	TRAF7 (ENSCPBG00000001296) #9	RAB26 (ENSCPBG00000001240) #10	TSC2 (ENSCPBG00000000684) #11	NTHL1 (ENSCPBG00000000500) #12	NHERF2 (ENSCPBG00000000484) #13	NPW (ENSCPBG00000000448)	ZNF598 (ENSCPBG00000000420) #14	SYNGR3 (ENSCPBG00000000410)	ENSCPBG00000000392 #16	ENSCPBG00000000320 #16	NOXO1 (ENSCPBG00000000284) #17	TBL3 (ENSCPBG00000000253) #18	ENSCPBG00000021147 ##20	NDUFB10 (ENSCPBG00000021145) #21	RPL3L (ENSCPBG00000021144) #22	ENSCPBG00000021142	MSRB1 (ENSCPBG00000021139) #23	HS3ST6 (ENSCPBG00000021136) #24	ENSCPBG00000021131 #25	FAHD1 (ENSCPBG00000021129)	HAGH (ENSCPBG00000021127)	HAGHL (ENSCPBG00000021125)	CIAO3 (ENSCPBG00000021121)	ENSCPBG00000021115	MSLN (ENSCPBG00000021104)	MSLNL (ENSCPBG00000021103)	RPUSD1 (ENSCPBG00000021101)	ENSCPBG00000021098	GNG13 (ENSCPBG00000021095)	ENSCPBG00000021089
Three-toed box turtle	MODERN SPECIES	37	CASKIN1 (ENSTMTG00000010761) #8	TRAF7 (ENSTMTG00000010814) #9	RAB26 (ENSTMTG00000010897) #10	PKD1 (ENSTMTG00000011202)	TSC2 (ENSTMTG00000012679) #11	NTHL1 (ENSTMTG00000013946) #12	NHERF2 (ENSTMTG00000013960) #13	NPW (ENSTMTG00000013979)	ZNF598 (ENSTMTG00000013997) #14	SYNGR3 (ENSTMTG00000014018)	ENSTMTG00000014026 #16	ENSTMTG00000014038	ENSTMTG00000014051 #16	NOXO1 (ENSTMTG00000014065) #17	TBL3 (ENSTMTG00000014086) #18	RPL3L (ENSTMTG00000014117) #22	ENSTMTG00000014167	MSRB1 (ENSTMTG00000014253) #23	HS3ST6 (ENSTMTG00000014265) #24	ENSTMTG00000014282 #25	FAHD1 (ENSTMTG00000014378)	HAGH (ENSTMTG00000014389)	HAGHL (ENSTMTG00000014410)	CIAO3 (ENSTMTG00000014433)	MSLN (ENSTMTG00000014493)	RPUSD1 (ENSTMTG00000014524)	ENSTMTG00000014532	GNG13 (ENSTMTG00000014572)	ENSTMTG00000014591	ENSTMTG00000014647	ENSTMTG00000014667
Testudinidae	ANCESTRAL SPECIES	13	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a.c	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b	ENSGT00940000159920
Goode s thornscrub tortoise	MODERN SPECIES	1	TRAF7 (ENSGEVG00005010712) #9	RAB26 (ENSGEVG00005010467) #10	PKD1 (ENSGEVG00005010104)	TSC2 (ENSGEVG00005009837) #11	NTHL1 (ENSGEVG00005009785) #12	NHERF2 (ENSGEVG00005009760) #13	ENSGEVG00005009733	ZNF598 (ENSGEVG00005009706) #14	SYNGR3 (ENSGEVG00005009679)	ENSGEVG00005009662 #16	ENSGEVG00005009624 #16	NOXO1 (ENSGEVG00005009476) #17	TBL3 (ENSGEVG00005009369) #18	RPS2 (ENSGEVG00005009296) ##20	NDUFB10 (ENSGEVG00005014052) #21	RPL3L (ENSGEVG00005013969) #22	ENSGEVG00005013809	MSRB1 (ENSGEVG00005013781) #23	HS3ST6 (ENSGEVG00005013758) #24	ENSGEVG00005013531 #25	FAHD1 (ENSGEVG00005013493)	HAGH (ENSGEVG00005013443)	HAGHL (ENSGEVG00005013402)	CIAO3 (ENSGEVG00005013374)	MSLN (ENSGEVG00005013327)	RPUSD1 (ENSGEVG00005013301)	CHTF18 (ENSGEVG00005013227)	GNG13 (ENSGEVG00005013181)	ENSGEVG00005013139	ENSGEVG00005013107	ENSGEVG00005013085
Abingdon island giant tortoise	MODERN SPECIES	2387			PKD1 (ENSCABG00000015135)	TSC2 (ENSCABG00000015548) #11	NTHL1 (ENSCABG00000020820) #12	NHERF2 (ENSCABG00000020825) #13	ENSCABG00000020830	ZNF598 (ENSCABG00000020834) #14	SYNGR3 (ENSCABG00000020840)	ENSCABG00000020842 #16	ENSCABG00000020843 #16	NOXO1 (ENSCABG00000020846) #17	TBL3 (ENSCABG00000020850) #18	RPS2 (ENSCABG00000020854) ##20	NDUFB10 (ENSCABG00000020856) #21	RPL3L (ENSCABG00000020860) #22	ENSCABG00000020884	ENSCABG00000020886	MSRB1 (ENSCABG00000020887) #23	HS3ST6 (ENSCABG00000020889) #24	ENSCABG00000020890 #25	FAHD1 (ENSCABG00000020892)	HAGH (ENSCABG00000020896)	HAGHL (ENSCABG00000020899)	CIAO3 (ENSCABG00000020903)	MSLN (ENSCABG00000020913)	ENSCABG00000020921	ENSCABG00000020923	CHTF18 (ENSCABG00000020924)	GNG13 (ENSCABG00000020927)	ENSCABG00000020933
Chinese turtle	MODERN SPECIES	1538		TRAF7 (ENSPSIG00000005045) #9	RAB26 (ENSPSIG00000005750) #10	PKD1 (ENSPSIG00000006724)	TSC2 (ENSPSIG00000012813) #11	NTHL1 (ENSPSIG00000016854) #12	NHERF2 (ENSPSIG00000017205) #13	ENSPSIG00000017488	ZNF598 (ENSPSIG00000017576) #14	SYNGR3 (ENSPSIG00000006000)	GFER (ENSPSIG00000008341) #16	NOXO1 (ENSPSIG00000009816) #17	TBL3 (ENSPSIG00000013024) #18	RPS2 (ENSPSIG00000006759) ##20	NDUFB10 (ENSPSIG00000007677) #21	RPL3L (ENSPSIG00000009158) #22	MSRB1 (ENSPSIG00000012515) #23	HS3ST6 (ENSPSIG00000001337) #24	ENSPSIG00000012787 #25	FAHD1 (ENSPSIG00000001342)	HAGH (ENSPSIG00000013336)	HAGHL (ENSPSIG00000013687)	CIAO3 (ENSPSIG00000013738)	ENSPSIG00000013833	MSLN (ENSPSIG00000013858)	ENSPSIG00000013864	MSLNL (ENSPSIG00000013875)	RPUSD1 (ENSPSIG00000013945)	CHTF18 (ENSPSIG00000014337)	GNG13 (ENSPSIG00000014743)
Archosauria	ANCESTRAL SPECIES	8	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Australian saltwater crocodile	MODERN SPECIES	46	CASKIN1 (ENSCPRG00005011673) #8	TRAF7 (ENSCPRG00005011717) #9	RAB26 (ENSCPRG00005011908) #10	PKD1 (ENSCPRG00005011957)	TSC2 (ENSCPRG00005012774) #11	NTHL1 (ENSCPRG00005014823) #12	NHERF2 (ENSCPRG00005014828) #13	ZNF598 (ENSCPRG00005014838) #14	SYNGR3 (ENSCPRG00005014849)	ENSCPRG00005014852 #16	ENSCPRG00005014855 #16	NOXO1 (ENSCPRG00005014858) #17	TBL3 (ENSCPRG00005014863) #18	RPS2 (ENSCPRG00005014874) ##20	NDUFB10 (ENSCPRG00005014877) #21	RPL3L (ENSCPRG00005014882) #22	ENSCPRG00005014889	MSRB1 (ENSCPRG00005014891) #23	HS3ST6 (ENSCPRG00005014894) #24	ENSCPRG00005014901 #25	FAHD1 (ENSCPRG00005014926)	HAGH (ENSCPRG00005014931)	HAGHL (ENSCPRG00005014932)	CIAO3 (ENSCPRG00005014936)	MSLN (ENSCPRG00005014948)	RPUSD1 (ENSCPRG00005014953)	CHTF18 (ENSCPRG00005014962)	GNG13 (ENSCPRG00005014982)	ENSCPRG00005014986	ENSCPRG00005015005	ENSCPRG00005015009
Aves	ANCESTRAL SPECIES	11	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00390000001979.a #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00940000175728
African ostrich	MODERN SPECIES	303				PKD1 (ENSSCUG00000001295)	TSC2 (ENSSCUG00000001299) #11	NTHL1 (ENSSCUG00000001302) #12	NHERF2 (ENSSCUG00000001303) #13	ZNF598 (ENSSCUG00000001304) #14	SYNGR3 (ENSSCUG00000001306)	ENSSCUG00000001307 #16	ENSSCUG00000001309 #16	NOXO1 (ENSSCUG00000001311) #17	TBL3 (ENSSCUG00000001313) #18	RPS2 (ENSSCUG00000001317) ##20	NDUFB10 (ENSSCUG00000001319) #21	RPL3L (ENSSCUG00000001320) #22	ENSSCUG00000001324	MSRB1 (ENSSCUG00000001325) #23	HS3ST6 (ENSSCUG00000001326) #24	ENSSCUG00000001330 #25	FAHD1 (ENSSCUG00000001333)	HAGH (ENSSCUG00000001335)	CIAO3 (ENSSCUG00000001337)
Neognathae	ANCESTRAL SPECIES	10	ENSGT00940000157022 #9	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00940000175728
Galloanserae	ANCESTRAL SPECIES	9	ENSGT00940000157022 #9	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00940000175728
Phasianidae	ANCESTRAL SPECIES	10	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00940000175728
Phasianidae_b	ANCESTRAL SPECIES	10	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000159176	ENSGT00940000160452	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Chicken	MODERN SPECIES	5	CASKIN1 (ENSGALG00010018060) #8	TRAF7 (ENSGALG00010018001) #9	RAB26 (ENSGALG00010017991) #10	PKD1 (ENSGALG00010017973)	TSC2 (ENSGALG00010017930) #11	NTHL1 (ENSGALG00010017909) #12	NHERF2 (ENSGALG00010017898) #13	NPW (ENSGALG00010017136)	ZNF598 (ENSGALG00010017038) #14	SYNGR3 (ENSGALG00010017012)	GFER (ENSGALG00010016986) #16	NOXO1 (ENSGALG00010018902) #17	TBL3 (ENSGALG00010018883) #18	RPS2 (ENSGALG00010018867) ##20	NDUFB10 (ENSGALG00010018852) #21	RPL3L (ENSGALG00010018839) #22	ENSGALG00010018799	MSRB1 (ENSGALG00010018774) #23	HS3ST6 (ENSGALG00010018729) #24	ENSGALG00010018717 #25	HAGH (ENSGALG00010018649)	FAHD1 (ENSGALG00010018618)	HAGHL (ENSGALG00010018607)	NARFL (ENSGALG00010018577)	ENSGALG00010018558	ENSGALG00010018518	RPUSD1 (ENSGALG00010018513)	CHTF18 (ENSGALG00010018505)	GNG13 (ENSGALG00010018496)	ENSGALG00010018487	ENSGALG00010018478
Turkey	MODERN SPECIES	7	ENSMGAG00000005364	ENSMGAG00000005413	ENSMGAG00000005447	ENSMGAG00000005464	ENSMGAG00000005483	ENSMGAG00000005534	ENSMGAG00000005509	ENSMGAG00000021125	HAGH (ENSMGAG00000020966)	ENSMGAG00000005544 #25	ENSMGAG00000015559	HS3ST6 (ENSMGAG00000006773) #24	MSRB1 (ENSMGAG00000021545) #23	ENSMGAG00000005632	ENSMGAG00000005622 #21	ENSMGAG00000005601 #22	ENSMGAG00000005578	ENSMGAG00000020469 ##20	ENSMGAG00000005762 #17	TBL3 (ENSMGAG00000005694) #18	ENSMGAG00000005803 #14	SYNGR3 (ENSMGAG00000018829)	ENSMGAG00000005855 #12	NHERF2 (ENSMGAG00000005833) #13	TSC2 (ENSMGAG00000005868) #11	ENSMGAG00000005953	ENSMGAG00000006057 #10	ENSMGAG00000006073 #9	ENSMGAG00000006117 #8	ENSMGAG00000006161	PGP (ENSMGAG00000021398)
Japanese quail	MODERN SPECIES	5	TRAF7 (ENSCJPG00005010210) #9	RAB26 (ENSCJPG00005010209) #10	PKD1 (ENSCJPG00005010194)	TSC2 (ENSCJPG00005005643) #11	NTHL1 (ENSCJPG00005005626) #12	NHERF2 (ENSCJPG00005005625) #13	ENSCJPG00005005624	ZNF598 (ENSCJPG00005005623) #14	SYNGR3 (ENSCJPG00005005622)	ENSCJPG00005005621	GFER (ENSCJPG00005005619) #16	NOXO1 (ENSCJPG00005005616) #17	TBL3 (ENSCJPG00005005614) #18	RPS2 (ENSCJPG00005005612) ##20	NDUFB10 (ENSCJPG00005005611) #21	RPL3L (ENSCJPG00005005610) #22	ENSCJPG00005005607	MSRB1 (ENSCJPG00005005606) #23	HS3ST6 (ENSCJPG00005005605) #24	ENSCJPG00005005595 #25	FAHD1 (ENSCJPG00005005586)	HAGH (ENSCJPG00005005582)	HAGHL (ENSCJPG00005005580)	CIAO3 (ENSCJPG00005005572)	MSLN (ENSCJPG00005005570)	ENSCJPG00005005567	RPUSD1 (ENSCJPG00005005566)	CHTF18 (ENSCJPG00005005558)	GNG13 (ENSCJPG00005005553)	ENSCJPG00005005548	ENSCJPG00005005544
Anatidae	ANCESTRAL SPECIES	7	ENSGT00940000157022 #9	ENSGT00940000172381	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924.d	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00940000175728
Duck	MODERN SPECIES	6	TRAF7 (ENSAPLG00000007038) #9	ENSAPLG00000027708	RAB26 (ENSAPLG00000007208) #10	ENSAPLG00000026973	ENSAPLG00000016718	TSC2 (ENSAPLG00000007194) #11	NTHL1 (ENSAPLG00000008412) #12	NHERF2 (ENSAPLG00000008441) #13	ZNF598 (ENSAPLG00000008877) #14	SYNGR3 (ENSAPLG00000019392)	ENSAPLG00000030749	ENSAPLG00000029299 #17	TBL3 (ENSAPLG00000008515) #18	RPS2 (ENSAPLG00000008455) ##20	NDUFB10 (ENSAPLG00000008454) #21	RPL3L (ENSAPLG00000008390) #22	ENSAPLG00000018980	MSRB1 (ENSAPLG00000021117) #23	HS3ST6 (ENSAPLG00000017464) #24	ENSAPLG00000008347 #25	FAHD1 (ENSAPLG00000024457)	MSLNL (ENSAPLG00000021911)	ENSAPLG00000012415	CIAO3 (ENSAPLG00000012541)	ENSAPLG00000018609	HAGH (ENSAPLG00000008216)	GNG13 (ENSAPLG00000011862)	ENSAPLG00000011695	ENSAPLG00000019481	LMF1 (ENSAPLG00000003654)	SOX8 (ENSAPLG00000003216)
Pink-footed goose	MODERN SPECIES	59	ENSABRG00000008469	TRAF7 (ENSABRG00000008518) #9	RAB26 (ENSABRG00000008787) #10	PKD1 (ENSABRG00000008867)	TSC2 (ENSABRG00000009812) #11	NTHL1 (ENSABRG00000014025) #12	NHERF2 (ENSABRG00000014028) #13	ENSABRG00000014032	ZNF598 (ENSABRG00000014043) #14	SYNGR3 (ENSABRG00000014049)	GFER (ENSABRG00000014055) #16	NOXO1 (ENSABRG00000014059) #17	TBL3 (ENSABRG00000014067) #18	RPS2 (ENSABRG00000014090) ##20	NDUFB10 (ENSABRG00000014096) #21	RPL3L (ENSABRG00000014104) #22	ENSABRG00000014113	MSRB1 (ENSABRG00000014151) #23	HS3ST6 (ENSABRG00000014160) #24	ENSABRG00000014168 #25	FAHD1 (ENSABRG00000014194)	HAGH (ENSABRG00000014196)	HAGHL (ENSABRG00000014200)	CIAO3 (ENSABRG00000014201)	MSLN (ENSABRG00000014207)	ENSABRG00000014220	RPUSD1 (ENSABRG00000014233)	CHTF18 (ENSABRG00000014258)	ENSABRG00000014279	ENSABRG00000014283	ENSABRG00000014299
Neognathae_b	ANCESTRAL SPECIES	12	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Neognathae_c	ANCESTRAL SPECIES	14	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b	ENSGT00940000159920
Golden eagle	MODERN SPECIES	17	ENSACCG00020013114	TRAF7 (ENSACCG00020013210) #9	RAB26 (ENSACCG00020013253) #10	PKD1 (ENSACCG00020013456)	TSC2 (ENSACCG00020013721) #11	NTHL1 (ENSACCG00020013763) #12	NHERF2 (ENSACCG00020013780) #13	ENSACCG00020013788	ZNF598 (ENSACCG00020013811) #14	SYNGR3 (ENSACCG00020013829)	GFER (ENSACCG00020013856) #16	NOXO1 (ENSACCG00020013874) #17	TBL3 (ENSACCG00020013894) #18	RPS2 (ENSACCG00020013938) ##20	NDUFB10 (ENSACCG00020013951) #21	RPL3L (ENSACCG00020013977) #22	ENSACCG00020013996	MSRB1 (ENSACCG00020014009) #23	HS3ST6 (ENSACCG00020014015) #24	ENSACCG00020014054 #25	FAHD1 (ENSACCG00020014092)	HAGH (ENSACCG00020014116)	HAGHL (ENSACCG00020014150)	CIAO3 (ENSACCG00020014181)	MSLN (ENSACCG00020014201)	RPUSD1 (ENSACCG00020014226)	CHTF18 (ENSACCG00020014260)	GNG13 (ENSACCG00020014286)	ENSACCG00020014300	LMF1 (ENSACCG00020014313)	SOX8 (ENSACCG00020014332)
Kakapo	MODERN SPECIES	21	CASKIN1 (ENSSHBG00005020016) #8	TRAF7 (ENSSHBG00005020011) #9	RAB26 (ENSSHBG00005020005) #10	PKD1 (ENSSHBG00005019990)	TSC2 (ENSSHBG00005012886) #11	NTHL1 (ENSSHBG00005010959) #12	ENSSHBG00005010912	NHERF2 (ENSSHBG00005010863) #13	ZNF598 (ENSSHBG00005010821) #14	SYNGR3 (ENSSHBG00005010799)	GFER (ENSSHBG00005010784) #16	NOXO1 (ENSSHBG00005010737) #17	TBL3 (ENSSHBG00005010662) #18	RPS2 (ENSSHBG00005010592) ##20	NDUFB10 (ENSSHBG00005010570) #21	RPL3L (ENSSHBG00005010527) #22	ENSSHBG00005010475	ENSSHBG00005010439	HS3ST6 (ENSSHBG00005010427) #24	ENSSHBG00005010388 #25	FAHD1 (ENSSHBG00005010366)	HAGH (ENSSHBG00005010319)	HAGHL (ENSSHBG00005010196)	CIAO3 (ENSSHBG00005010157)	MSLN (ENSSHBG00005010128)	RPUSD1 (ENSSHBG00005000730)	CHTF18 (ENSSHBG00005000709)	GNG13 (ENSSHBG00005017717)	ENSSHBG00005017707	ENSSHBG00005017685	ENSSHBG00005017669
Passeriformes	ANCESTRAL SPECIES	11	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723 #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924.f	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00950000182957.b.a.b.b	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Great tit	MODERN SPECIES	5	CASKIN1 (ENSPMJG00000019239) #8	TRAF7 (ENSPMJG00000019238) #9	RAB26 (ENSPMJG00000019237) #10	PKD1 (ENSPMJG00000019221)	TSC2 (ENSPMJG00000017686) #11	NTHL1 (ENSPMJG00000017660) #12	NHERF2 (ENSPMJG00000017659) #13	ENSPMJG00000017658	ZNF598 (ENSPMJG00000017656) #14	SYNGR3 (ENSPMJG00000017655)	GFER (ENSPMJG00000017654) #16	NOXO1 (ENSPMJG00000017653) #17	TBL3 (ENSPMJG00000017652) #18	RPS2 (ENSPMJG00000017650) ##20	NDUFB10 (ENSPMJG00000017649) #21	RPL3L (ENSPMJG00000017648) #22	ENSPMJG00000017629	MSRB1 (ENSPMJG00000017628) #23	ENSPMJG00000017627	HS3ST6 (ENSPMJG00000017626) #24	ENSPMJG00000017625 #25	FAHD1 (ENSPMJG00000017619)	ENSPMJG00000017618	HAGH (ENSPMJG00000017615)	ENSPMJG00000017614	CIAO3 (ENSPMJG00000017612)	ENSPMJG00000017604	ENSPMJG00000017603	RPUSD1 (ENSPMJG00000017601)	CHTF18 (ENSPMJG00000017598)	GNG13 (ENSPMJG00000017592)
Passeriformes_d	ANCESTRAL SPECIES	11	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723.b #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924.f	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b	ENSGT00940000159920
Flycatcher	MODERN SPECIES	5	TRAF7 (ENSFALG00000003582) #9	RAB26 (ENSFALG00000003576) #10	PKD1 (ENSFALG00000003570)	TSC2 (ENSFALG00000003513) #11	NTHL1 (ENSFALG00000003482) #12	NHERF2 (ENSFALG00000003473) #13	ENSFALG00000027182	ENSFALG00000027229	ZNF598 (ENSFALG00000003463) #14	SYNGR3 (ENSFALG00000003454)	GFER (ENSFALG00000028289) #16	ENSFALG00000027154 #17	TBL3 (ENSFALG00000003409) #18	RPS2 (ENSFALG00000003370) ##20	NDUFB10 (ENSFALG00000024379) #21	RPL3L (ENSFALG00000003326) #22	ENSFALG00000003313	MSRB1 (ENSFALG00000003304) #23	HS3ST6 (ENSFALG00000026410) #24	ENSFALG00000003297 #25	FAHD1 (ENSFALG00000014640)	HAGH (ENSFALG00000024701)	ENSFALG00000024621	CIAO3 (ENSFALG00000027329)	ENSFALG00000003224	RPUSD1 (ENSFALG00000026534)	CHTF18 (ENSFALG00000003188)	GNG13 (ENSFALG00000027392)	ENSFALG00000024700	ENSFALG00000003144	ENSFALG00000013656
Passeriformes_g	ANCESTRAL SPECIES	12	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00510000047678 #23	ENSGT00940000154768.B #24	ENSGT00390000001723.a #25	ENSGT00390000001723.b #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924.f	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b
Medium ground finch	MODERN SPECIES	102	MLST8 (ENSGFOG00000014286) #7	ENSGFOG00000014284	TRAF7 (ENSGFOG00000014249) #9	RAB26 (ENSGFOG00000014230) #10	PKD1 (ENSGFOG00000014214)	TSC2 (ENSGFOG00000011268) #11	NTHL1 (ENSGFOG00000010911) #12	NHERF2 (ENSGFOG00000010907) #13	ZNF598 (ENSGFOG00000010892) #14	SYNGR3 (ENSGFOG00000010885)	GFER (ENSGFOG00000010876) #16	NOXO1 (ENSGFOG00000010870) #17	TBL3 (ENSGFOG00000010855) #18	ENSGFOG00000010827 ##20	NDUFB10 (ENSGFOG00000010816) #21	RPL3L (ENSGFOG00000010806) #22	ENSGFOG00000010797	HS3ST6 (ENSGFOG00000010788) #24	ENSGFOG00000010771 #25	FAHD1 (ENSGFOG00000010761)	HAGH (ENSGFOG00000010755)	HAGHL (ENSGFOG00000010747)	CIAO3 (ENSGFOG00000010736)	ENSGFOG00000010724	RPUSD1 (ENSGFOG00000010722)	CHTF18 (ENSGFOG00000010709)	GNG13 (ENSGFOG00000010701)	ENSGFOG00000010692	ENSGFOG00000010688	LMF1 (ENSGFOG00000010677)	SOX8 (ENSGFOG00000010673)
Passeroidea	ANCESTRAL SPECIES	11	ENSGT00940000158025.a.a.b #8	ENSGT00940000157022 #9	ENSGT00940000158558 #10	ENSGT00940000158702	ENSGT00950000183139.C #11	ENSGT00510000047513 #12	ENSGT00950000182849.B.c.a #13	ENSGT00940000167821	ENSGT00390000014178 #14	ENSGT00950000182935.B.b.d	ENSGT00390000001979.b #16	ENSGT00940000158812 #17	ENSGT00940000157651 #18	ENSGT00940000153095.h ##20	ENSGT00390000006348 #21	ENSGT00390000017606.a.b #22	ENSGT00940000164352	ENSGT00390000001723.b #25	ENSGT00390000001723.a #25	ENSGT00940000160452	ENSGT00940000159176	ENSGT00940000161924.f	ENSGT00940000161924.e	ENSGT00940000153514.a.a	ENSGT00950000182957.b.a.a	ENSGT00510000048339	ENSGT00550000075029	ENSGT00530000064157.b	ENSGT00400000022459	ENSGT00530000063702.b	ENSGT00940000159920
Common canary	MODERN SPECIES	17	GRID2IP (ENSSCAG00000005277)	ZDHHC4 (ENSSCAG00000005311)	E4F1 (ENSSCAG00000005316)	PGP (ENSSCAG00000005321)	ENSSCAG00000005325	MLST8 (ENSSCAG00000005327) #7	ENSSCAG00000005331	ENSSCAG00000005337	ENSSCAG00000005364 #8	TRAF7 (ENSSCAG00000005369) #9	RAB26 (ENSSCAG00000005397) #10	NOXO1 (ENSSCAG00000005494) #17	TBL3 (ENSSCAG00000005498) #18	RPS2 (ENSSCAG00000005511) ##20	NDUFB10 (ENSSCAG00000005512) #21	RPL3L (ENSSCAG00000005515) #22	ENSSCAG00000005528	MSRB1 (ENSSCAG00000005536) #23	HS3ST6 (ENSSCAG00000005539) #24	ENSSCAG00000005542 #25	FAHD1 (ENSSCAG00000005544)	HAGH (ENSSCAG00000005549)	PKD1 (ENSSCAG00000005634)	TSC2 (ENSSCAG00000006018) #11	NTHL1 (ENSSCAG00000006049) #12	NHERF2 (ENSSCAG00000006056) #13	ZNF598 (ENSSCAG00000006065) #14	ENSSCAG00000006070	SYNGR3 (ENSSCAG00000006076)	GFER (ENSSCAG00000006086) #16	HAGHL (ENSSCAG00000006095)
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	5	CASKIN1 (ENSTGUG00000019917) #8	TRAF7 (ENSTGUG00000006321) #9	RAB26 (ENSTGUG00000006353) #10	PKD1 (ENSTGUG00000006371)	TSC2 (ENSTGUG00000006437) #11	NTHL1 (ENSTGUG00000006556) #12	NHERF2 (ENSTGUG00000022996) #13	ENSTGUG00000024262	ZNF598 (ENSTGUG00000006571) #14	SYNGR3 (ENSTGUG00000027112)	ENSTGUG00000021419 #16	NOXO1 (ENSTGUG00000006587) #17	ENSTGUG00000023211 #18	RPS2 (ENSTGUG00000006663) ##20	ENSTGUG00000021429 #21	ENSTGUG00000006708 #22	ENSTGUG00000006725	MSRB1 (ENSTGUG00000027855) #23	ENSTGUG00000022733	HS3ST6 (ENSTGUG00000006746) #24	ENSTGUG00000006747 #25	ENSTGUG00000006763	ENSTGUG00000022314	ENSTGUG00000027925	ENSTGUG00000029016	ENSTGUG00000024478	ENSTGUG00000029148	ENSTGUG00000018868	ENSTGUG00000021369	ENSTGUG00000018796	ENSTGUG00000020350 #16
Zebra finch	MODERN SPECIES	5	HS3ST6 (ENSTGUG00000006746) #24	ENSTGUG00000006747 #25	ENSTGUG00000006763	ENSTGUG00000022314	ENSTGUG00000027925	ENSTGUG00000029016	ENSTGUG00000024478	ENSTGUG00000029148	ENSTGUG00000018868	ENSTGUG00000021369	ENSTGUG00000018796	ENSTGUG00000020350 #16	ENSTGUG00000006592 #18	ENSTGUG00000026835	ENSTGUG00000006696 #21	ENSTGUG00000025310 #22	ENSTGUG00000020709	ENSTGUG00000026212	ENSTGUG00000016182 #25	ENSTGUG00000024646	ENSTGUG00000006768	ENSTGUG00000020767	ENSTGUG00000021169	ENSTGUG00000021559	ENSTGUG00000026604	ENSTGUG00000029663	GNG13 (ENSTGUG00000026224)	ENSTGUG00000006834	ENSTGUG00000022589	LMF1 (ENSTGUG00000006840)	SOX8 (ENSTGUG00000027602)