Theria ANCESTRAL SPECIES 1 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Eutheria ANCESTRAL SPECIES 26 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Boreoeutheria ANCESTRAL SPECIES 11 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Euarchontoglires ANCESTRAL SPECIES 11 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Primates ANCESTRAL SPECIES 19 ENSGT00940000162345 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Haplorrhini ANCESTRAL SPECIES 18 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 9 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b Catarrhini ANCESTRAL SPECIES 12 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000156607.a.a.b ##8 ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00950000183144.A.i.a.a.a.a.c ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 Hominoidea ANCESTRAL SPECIES 16 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 Hominidae ANCESTRAL SPECIES 8 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 Homo/Pan/Gorilla group ANCESTRAL SPECIES 9 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000010806.u.b #9 ENSGT00910000147236.a #11 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 Homo/Pan group ANCESTRAL SPECIES 9 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000010806.u.b #9 ENSGT00910000147236.a #11 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745.a #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 Pan ANCESTRAL SPECIES 6 ENSGT00940000159942.a ENSGT00940000159832.i.a ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000010806.u.b #9 ENSGT00910000147236.a #11 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00440000034745.a #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000938.p.b #20 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00910000148007 #28 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 Bonobo MODERN SPECIES 369 ENSPPAG00000031938 #7 NLGN4X (ENSPPAG00000024297) #8 ENSPPAG00000041919 #9 ENSPPAG00000026565 #10 ENSPPAG00000029939 #11 PUDP (ENSPPAG00000033208) #12 STS (ENSPPAG00000027346) #13 ENSPPAG00000023541 #14 PNPLA4 (ENSPPAG00000041363) #15 ENSPPAG00000033808 #16 ENSPPAG00000034060 #17 ANOS1 (ENSPPAG00000037398) #18 ENSPPAG00000038625 #19 ENSPPAG00000012738 #20 ENSPPAG00000040296 #21 TBL1X (ENSPPAG00000040439) #22 GPR143 (ENSPPAG00000040569) #23 ENSPPAG00000043651 #24 SHROOM2 (ENSPPAG00000041810) #25 CLDN34 (ENSPPAG00000019292) #26 WWC3 (ENSPPAG00000035084) #27 ENSPPAG00000029035 #28 CLCN4 (ENSPPAG00000004966) #29 MID1 (ENSPPAG00000038224) #30 HCCS (ENSPPAG00000040960) #31 ARHGAP6 (ENSPPAG00000018191) #32 AMELX (ENSPPAG00000027973) #33 MSL3 (ENSPPAG00000039607) #34 ENSPPAG00000039486 #35 PRPS2 (ENSPPAG00000034589) #36 ENSPPAG00000027387 #37 Chimpanzee MODERN SPECIES 972 PRKX (ENSPTRG00000022476) ENSPTRG00000047401 ENSPTRG00000051405 #7 NLGN4X (ENSPTRG00000021635) #8 ENSPTRG00000045716 #9 PUDP (ENSPTRG00000050372) #12 ENSPTRG00000043603 #11 STS (ENSPTRG00000021640) #13 PNPLA4 (ENSPTRG00000021641) #15 ENSPTRG00000003827 ##16 ENSPTRG00000021637 #17 ANOS1 (ENSPTRG00000021645) #18 FAM9A (ENSPTRG00000021649) ##21 ENSPTRG00000044756 #20 FAM9B (ENSPTRG00000045285) #21 TBL1X (ENSPTRG00000044234) #22 GPR143 (ENSPTRG00000051528) #23 SHROOM2 (ENSPTRG00000045318) #25 ENSPTRG00000046452 #24 CLDN34 (ENSPTRG00000043310) #26 WWC3 (ENSPTRG00000021653) #27 ENSPTRG00000047344 #28 CLCN4 (ENSPTRG00000021655) #29 MID1 (ENSPTRG00000021656) #30 HCCS (ENSPTRG00000021657) #31 ARHGAP6 (ENSPTRG00000021658) #32 AMELX (ENSPTRG00000021659) #33 MSL3 (ENSPTRG00000021662) #34 FRMPD4 (ENSPTRG00000021663) #35 PRPS2 (ENSPTRG00000021665) #36 TLR7 (ENSPTRG00000028318) Human MODERN SPECIES 1827 ARSH (ENSG00000205667) ARSF (ENSG00000062096) MXRA5 (ENSG00000101825) PRKX (ENSG00000183943) NLGN4X (ENSG00000146938) #8 VCX3A (ENSG00000169059) #17 PUDP (ENSG00000130021) #12 STS (ENSG00000101846) #13 VCX (ENSG00000182583) #17 PNPLA4 (ENSG00000006757) #15 VCX2 (ENSG00000177504) #17 VCX3B (ENSG00000205642) #17 ANOS1 (ENSG00000011201) #18 FAM9A (ENSG00000183304) ##21 FAM9B (ENSG00000177138) #21 TBL1X (ENSG00000101849) #22 GPR143 (ENSG00000101850) #23 SHROOM2 (ENSG00000146950) #25 CLDN34 (ENSG00000234469) #26 WWC3 (ENSG00000047644) #27 CLCN4 (ENSG00000073464) #29 MID1 (ENSG00000101871) #30 ENSG00000291314 HCCS (ENSG00000004961) #31 ARHGAP6 (ENSG00000047648) #32 AMELX (ENSG00000125363) #33 MSL3 (ENSG00000005302) #34 FRMPD4 (ENSG00000169933) #35 PRPS2 (ENSG00000101911) #36 TLR7 (ENSG00000196664) TLR8 (ENSG00000101916) Gorilla MODERN SPECIES 523 ARSF (ENSGGOG00000015466) MXRA5 (ENSGGOG00000003509) PRKX (ENSGGOG00000038945) ENSGGOG00000039941 #7 NLGN4X (ENSGGOG00000009613) #8 ENSGGOG00000022061 #9 PUDP (ENSGGOG00000004425) #12 ENSGGOG00000039560 #11 STS (ENSGGOG00000015129) #13 PNPLA4 (ENSGGOG00000005430) #15 ENSGGOG00000003263 #17 ANOS1 (ENSGGOG00000001551) #18 FAM9A (ENSGGOG00000004483) ##21 ENSGGOG00000042556 #20 ENSGGOG00000012708 #21 TBL1X (ENSGGOG00000007537) #22 GPR143 (ENSGGOG00000013718) #23 SHROOM2 (ENSGGOG00000012923) #25 ENSGGOG00000007843 #24 WWC3 (ENSGGOG00000013945) #27 CLCN4 (ENSGGOG00000010955) #29 ENSGGOG00000023785 MID1 (ENSGGOG00000003756) #30 HCCS (ENSGGOG00000007328) #31 ARHGAP6 (ENSGGOG00000009476) #32 AMELX (ENSGGOG00000027601) #33 ENSGGOG00000043743 MSL3 (ENSGGOG00000006582) #34 ENSGGOG00000008693 #35 PRPS2 (ENSGGOG00000008315) #36 ENSGGOG00000043391 #37 Orangutan MODERN SPECIES 242 ENSPPYG00000041110 #7 NLGN4X (ENSPPYG00000020101) #8 ENSPPYG00000034528 #17 ENSPPYG00000034844 #17 PUDP (ENSPPYG00000020105) #12 STS (ENSPPYG00000020106) #13 ENSPPYG00000020107 #17 PNPLA4 (ENSPPYG00000020108) #15 ENSPPYG00000030724 ENSPPYG00000020103 #17 ENSPPYG00000020110 #17 ANOS1 (ENSPPYG00000020111) #18 ENSPPYG00000020112 ##21 ENSPPYG00000041314 #20 FAM9B (ENSPPYG00000020113) #21 TBL1X (ENSPPYG00000020115) #22 GPR143 (ENSPPYG00000029613) #23 SHROOM2 (ENSPPYG00000020116) #25 WWC3 (ENSPPYG00000020117) #27 CLCN4 (ENSPPYG00000020118) #29 MID1 (ENSPPYG00000020119) #30 HCCS (ENSPPYG00000020120) #31 ARHGAP6 (ENSPPYG00000020121) #32 AMELX (ENSPPYG00000020122) #33 MSL3 (ENSPPYG00000020123) #34 FRMPD4 (ENSPPYG00000020124) #35 PRPS2 (ENSPPYG00000020125) #36 TLR7 (ENSPPYG00000035228) TLR8 (ENSPPYG00000020126) TMSB4X (ENSPPYG00000020127) ENSPPYG00000020128 ##19 Gibbon MODERN SPECIES 449 CRLF2 (ENSNLEG00000008543) ENSNLEG00000027560 #7 NLGN4X (ENSNLEG00000008563) #8 ENSNLEG00000018728 ENSNLEG00000031782 #9 ENSNLEG00000031775 #17 ENSNLEG00000031223 ##12 STS (ENSNLEG00000008592) #13 ENSNLEG00000028522 #17 PNPLA4 (ENSNLEG00000008610) #15 ENSNLEG00000034678 #17 ENSNLEG00000032968 #17 ANOS1 (ENSNLEG00000008627) #18 ENSNLEG00000008661 ##21 ENSNLEG00000008698 #19 TBL1X (ENSNLEG00000008726) #22 SHROOM2 (ENSNLEG00000008795) #25 WWC3 (ENSNLEG00000008813) #27 CLCN4 (ENSNLEG00000008869) #29 MID1 (ENSNLEG00000008909) #30 HCCS (ENSNLEG00000008965) #31 ARHGAP6 (ENSNLEG00000008995) #32 AMELX (ENSNLEG00000009032) #33 MSL3 (ENSNLEG00000009057) #34 ENSNLEG00000009084 #35 PRPS2 (ENSNLEG00000031852) ##36 ENSNLEG00000029266 TLR7 (ENSNLEG00000009123) TLR8 (ENSNLEG00000009126) TMSB4X (ENSNLEG00000027420) ENSNLEG00000009132 ##19 Cercopithecidae ANCESTRAL SPECIES 27 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000156607.a.a.b ##8 ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00390000007547.h ENSGT00950000182803.B.d.b.w ##36 Cercopithecinae ANCESTRAL SPECIES 13 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i ENSGT00940000156607.a.a.b ##8 ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.f #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00390000007547.h ENSGT00950000182803.B.d.b.w ##36 Cercopithecinae_a ANCESTRAL SPECIES 11 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.f #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00390000007547.h ENSGT00950000182803.B.d.b.w ##36 Macaca ANCESTRAL SPECIES 29 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00440000034745 #17 ENSGT00390000010806.u.b #9 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.e.a #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00390000007547.h ENSGT00950000182803.B.d.a.j ##36 ENSGT00940000159771 Pig-tailed macaque MODERN SPECIES 549 ARSL (ENSMNEG00000039356) ARSH (ENSMNEG00000043860) ARSF (ENSMNEG00000041423) MXRA5 (ENSMNEG00000028609) PRKX (ENSMNEG00000008995) ENSMNEG00000042954 #7 NLGN4X (ENSMNEG00000038059) #8 ENSMNEG00000036694 ENSMNEG00000031381 #9 PUDP (ENSMNEG00000042150) #12 STS (ENSMNEG00000041778) #13 PNPLA4 (ENSMNEG00000040651) #15 ANOS1 (ENSMNEG00000032430) #18 FAM9A (ENSMNEG00000027971) ##21 FAM9B (ENSMNEG00000031342) #21 TBL1X (ENSMNEG00000029675) #22 GPR143 (ENSMNEG00000045522) #23 SHROOM2 (ENSMNEG00000037860) #25 ENSMNEG00000043034 #24 WWC3 (ENSMNEG00000015194) #27 CLCN4 (ENSMNEG00000039953) #29 MID1 (ENSMNEG00000026727) #30 HCCS (ENSMNEG00000030629) #31 ARHGAP6 (ENSMNEG00000024505) #32 AMELX (ENSMNEG00000030965) #33 MSL3 (ENSMNEG00000045099) #34 FRMPD4 (ENSMNEG00000037159) #35 PRPS2 (ENSMNEG00000028517) #36 ENSMNEG00000032285 TLR7 (ENSMNEG00000037104) TLR8 (ENSMNEG00000015028) Macaca_a ANCESTRAL SPECIES 11 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00440000034745 #17 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.e.a #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Crab-eating macaque MODERN SPECIES 175 ARSL (ENSMFAG00000038813) ARSH (ENSMFAG00000033934) ARSF (ENSMFAG00000038297) MXRA5 (ENSMFAG00000031111) ENSMFAG00000047474 ENSMFAG00000050462 ENSMFAG00000060651 ENSMFAG00000047931 PUDP (ENSMFAG00000045887) #12 STS (ENSMFAG00000003615) #13 PNPLA4 (ENSMFAG00000034240) #15 ANOS1 (ENSMFAG00000032686) #18 FAM9A (ENSMFAG00000003533) ##21 FAM9B (ENSMFAG00000030768) #21 ENSMFAG00000058384 TBL1X (ENSMFAG00000005183) #22 GPR143 (ENSMFAG00000001522) #23 ENSMFAG00000064101 ENSMFAG00000031091 #25 ENSMFAG00000063450 CLDN34 (ENSMFAG00000049824) #26 WWC3 (ENSMFAG00000040661) #27 CLCN4 (ENSMFAG00000041385) #29 MID1 (ENSMFAG00000037182) #30 HCCS (ENSMFAG00000030584) #31 ARHGAP6 (ENSMFAG00000037315) #32 ENSMFAG00000035396 #33 ENSMFAG00000064480 MSL3 (ENSMFAG00000031868) #34 FRMPD4 (ENSMFAG00000035360) #35 PRPS2 (ENSMFAG00000031505) #36 Rhesus MODERN SPECIES 327 ENSMMUG00000032544 #7 NLGN4X (ENSMMUG00000011310) #8 ENSMMUG00000051504 #17 ENSMMUG00000055686 PUDP (ENSMMUG00000017377) #12 STS (ENSMMUG00000017378) #13 PNPLA4 (ENSMMUG00000018194) #15 ENSMMUG00000051223 ENSMMUG00000061895 ENSMMUG00000056503 ENSMMUG00000059835 #17 ENSMMUG00000058160 #17 ANOS1 (ENSMMUG00000018191) #18 FAM9A (ENSMMUG00000047671) ##21 FAM9B (ENSMMUG00000018844) #21 TBL1X (ENSMMUG00000006191) #22 GPR143 (ENSMMUG00000006192) #23 SHROOM2 (ENSMMUG00000006193) #25 WWC3 (ENSMMUG00000016290) #27 CLCN4 (ENSMMUG00000013635) #29 MID1 (ENSMMUG00000020179) #30 ENSMMUG00000061144 ENSMMUG00000051459 HCCS (ENSMMUG00000013993) #31 ARHGAP6 (ENSMMUG00000003896) #32 ENSMMUG00000054969 ENSMMUG00000051616 AMELX (ENSMMUG00000008256) #33 ENSMMUG00000063078 MSL3 (ENSMMUG00000002689) #34 ENSMMUG00000063578 Cercopithecinae_b ANCESTRAL SPECIES 35 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00940000157820.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.f #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Cercopithecinae_d ANCESTRAL SPECIES 51 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.i.g.a ENSGT00510000048363.e.a.b ENSGT01030000234626.A.b.o.a #7 ENSGT00940000156607.a.a.a #8 ENSGT00390000014753.l.a #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00390000000062.x.b.g.b ##21 ENSGT00390000000062.x.b.g.a #21 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.f #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Sooty mangabey MODERN SPECIES 448 ARSL (ENSCATG00000043732) ARSH (ENSCATG00000035369) ARSF (ENSCATG00000037426) MXRA5 (ENSCATG00000032500) PRKX (ENSCATG00000040178) ENSCATG00000044673 ENSCATG00000033348 #7 NLGN4X (ENSCATG00000045063) #8 PUDP (ENSCATG00000039040) #12 STS (ENSCATG00000042492) #13 PNPLA4 (ENSCATG00000041197) #15 ANOS1 (ENSCATG00000034938) #18 FAM9A (ENSCATG00000017254) ##21 FAM9B (ENSCATG00000037312) #21 ENSCATG00000028947 TBL1X (ENSCATG00000010513) #22 GPR143 (ENSCATG00000032300) #23 ENSCATG00000030274 #24 SHROOM2 (ENSCATG00000036342) #25 WWC3 (ENSCATG00000036479) #27 CLCN4 (ENSCATG00000045208) #29 MID1 (ENSCATG00000029147) #30 HCCS (ENSCATG00000037288) #31 AMELX (ENSCATG00000031078) #33 ARHGAP6 (ENSCATG00000041999) #32 MSL3 (ENSCATG00000044726) #34 FRMPD4 (ENSCATG00000032453) #35 PRPS2 (ENSCATG00000044789) #36 TLR7 (ENSCATG00000043999) TLR8 (ENSCATG00000044274) ENSCATG00000035722 Drill MODERN SPECIES 1514 FAM9A (ENSMLEG00000016727) ##21 FAM9B (ENSMLEG00000011070) #21 ENSMLEG00000005464 TBL1X (ENSMLEG00000036425) #22 GPR143 (ENSMLEG00000032891) #23 ENSMLEG00000031913 SHROOM2 (ENSMLEG00000031458) #25 ENSMLEG00000027419 ENSMLEG00000027549 ENSMLEG00000031208 #28 WWC3 (ENSMLEG00000029686) #27 CLCN4 (ENSMLEG00000021001) #29 MID1 (ENSMLEG00000034816) #30 Olive baboon MODERN SPECIES 792 ENSPANG00000039410 ENSPANG00000046059 ENSPANG00000044832 ENSPANG00000029603 NLGN4X (ENSPANG00000013392) #8 PUDP (ENSPANG00000006960) #12 STS (ENSPANG00000015621) #13 PNPLA4 (ENSPANG00000012311) #15 ANOS1 (ENSPANG00000020427) #18 FAM9B (ENSPANG00000008548) #21 ENSPANG00000046530 ENSPANG00000040998 TBL1X (ENSPANG00000016547) #22 GPR143 (ENSPANG00000010106) #23 SHROOM2 (ENSPANG00000005170) #25 WWC3 (ENSPANG00000017940) #27 CLCN4 (ENSPANG00000020606) #29 MID1 (ENSPANG00000006683) #30 HCCS (ENSPANG00000004637) #31 AMELX (ENSPANG00000010854) #33 ARHGAP6 (ENSPANG00000007278) #32 ENSPANG00000043491 MSL3 (ENSPANG00000001077) #34 ENSPANG00000050542 ENSPANG00000038884 FRMPD4 (ENSPANG00000000890) #35 PRPS2 (ENSPANG00000000891) #36 TLR7 (ENSPANG00000019254) Vervet Monkey MODERN SPECIES 203 ARSH (ENSCSAG00000015609) ARSF (ENSCSAG00000015554) ENSCSAG00000015550 ENSCSAG00000015543 PRKX (ENSCSAG00000015525) ENSCSAG00000015479 ENSCSAG00000015471 NLGN4Y (ENSCSAG00000015461) ##8 PUDP (ENSCSAG00000015456) #12 STS (ENSCSAG00000015446) #13 PNPLA4 (ENSCSAG00000015414) #15 ENSCSAG00000015410 #17 ANOS1 (ENSCSAG00000015400) #18 FAM9A (ENSCSAG00000015382) ##21 ENSCSAG00000015368 TBL1X (ENSCSAG00000015344) #22 GPR143 (ENSCSAG00000015333) #23 ENSCSAG00000015314 #24 SHROOM2 (ENSCSAG00000015306) #25 CLDN34 (ENSCSAG00000015300) #26 WWC3 (ENSCSAG00000015295) #27 CLCN4 (ENSCSAG00000015279) #29 MID1 (ENSCSAG00000015273) #30 HCCS (ENSCSAG00000015264) #31 ARHGAP6 (ENSCSAG00000015249) #32 AMELX (ENSCSAG00000015206) #33 MSL3 (ENSCSAG00000015196) #34 FRMPD4 (ENSCSAG00000015185) #35 PRPS2 (ENSCSAG00000015172) #36 TLR7 (ENSCSAG00000019529) TLR8 (ENSCSAG00000019530) Rhinopithecus ANCESTRAL SPECIES 593 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00390000016478.i.b #24 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 Golden snub-nosed monkey MODERN SPECIES 2776 TBL1X (ENSRROG00000030460) #22 GPR143 (ENSRROG00000035302) #23 SHROOM2 (ENSRROG00000000052) #25 ENSRROG00000039706 #24 WWC3 (ENSRROG00000002409) #27 CLCN4 (ENSRROG00000026310) #29 ENSRROG00000043615 #30 Black snub-nosed monkey MODERN SPECIES 2335 TBL1X (ENSRBIG00000028269) #22 GPR143 (ENSRBIG00000031351) #23 Platyrrhini ANCESTRAL SPECIES 28 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.h ENSGT00940000153773.a.b.b.r.b ENSGT01030000234626.A.b.p ##7 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT01040000240965 #19 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b Cebidae ANCESTRAL SPECIES 18 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.g ENSGT01030000234626.A.b.p ##7 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT01040000240965 #19 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Cebidae_a ANCESTRAL SPECIES 36 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832.h ENSGT00940000153773.a.b.b.r.b ENSGT00940000154355.f.o.b.d ENSGT01030000234626.A.b.p ##7 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00440000034745 #17 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT01040000240965 #19 ENSGT00960000187465 ENSGT00940000153421.a.a.a.a.b.i #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.v.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a ENSGT00940000154433.b Capuchin MODERN SPECIES 426 ENSCCAG00000031072 ##21 ENSCCAG00000024215 #20 FAM9B (ENSCCAG00000024951) #21 ENSCCAG00000007508 TBL1X (ENSCCAG00000026365) #22 GPR143 (ENSCCAG00000027858) #23 SHROOM2 (ENSCCAG00000036670) #25 WWC3 (ENSCCAG00000010194) #27 CLCN4 (ENSCCAG00000021206) #29 MID1 (ENSCCAG00000029160) #30 HCCS (ENSCCAG00000029155) #31 ARHGAP6 (ENSCCAG00000037474) #32 Bolivian squirrel monkey MODERN SPECIES 42 ENSSBOG00000021975 ENSSBOG00000030922 ENSSBOG00000033705 ##7 ENSSBOG00000019015 #8 PUDP (ENSSBOG00000001289) #12 STS (ENSSBOG00000019003) #13 ENSSBOG00000033397 #17 PNPLA4 (ENSSBOG00000018040) #15 ENSSBOG00000018165 #17 ENSSBOG00000033414 ANOS1 (ENSSBOG00000032956) #18 ENSSBOG00000015549 #20 ENSSBOG00000021955 ENSSBOG00000005958 #19 ENSSBOG00000031924 TBL1X (ENSSBOG00000015622) #22 GPR143 (ENSSBOG00000019241) #23 SHROOM2 (ENSSBOG00000000055) #25 WWC3 (ENSSBOG00000033448) #27 CLCN4 (ENSSBOG00000029604) #29 MID1 (ENSSBOG00000018276) #30 HCCS (ENSSBOG00000016272) #31 ARHGAP6 (ENSSBOG00000018744) #32 AMELX (ENSSBOG00000033200) #33 ENSSBOG00000018595 ENSSBOG00000031637 MSL3 (ENSSBOG00000007759) #34 FRMPD4 (ENSSBOG00000019999) #35 PRPS2 (ENSSBOG00000023758) #36 TLR7 (ENSSBOG00000015568) TLR8 (ENSSBOG00000035013) Marmoset MODERN SPECIES 78 ENSCJAG00000018850 #17 PUDP (ENSCJAG00000040308) #12 STS (ENSCJAG00000000274) #13 ENSCJAG00000075334 ENSCJAG00000000866 #17 PNPLA4 (ENSCJAG00000054805) #15 ENSCJAG00000075429 #17 ENSCJAG00000073795 ENSCJAG00000004073 #17 ENSCJAG00000053609 #17 ANOS1 (ENSCJAG00000000873) #18 ENSCJAG00000055596 #17 ENSCJAG00000000896 #19 ENSCJAG00000082544 #17 FAM9B (ENSCJAG00000000906) #21 TBL1X (ENSCJAG00000000909) #22 GPR143 (ENSCJAG00000000922) #23 SHROOM2 (ENSCJAG00000000928) #25 ENSCJAG00000056429 CLDN34 (ENSCJAG00000071198) #26 WWC3 (ENSCJAG00000000935) #27 CLCN4 (ENSCJAG00000000961) #29 MID1 (ENSCJAG00000000987) #30 HCCS (ENSCJAG00000001007) #31 ARHGAP6 (ENSCJAG00000001025) #32 AMELX (ENSCJAG00000001049) #33 MSL3 (ENSCJAG00000001061) #34 FRMPD4 (ENSCJAG00000006179) #35 ENSCJAG00000047794 ##36 TLR7 (ENSCJAG00000003924) TLR8 (ENSCJAG00000003929) Mas night monkey MODERN SPECIES 549 ENSANAG00000035365 #19 ENSANAG00000018652 #20 ENSANAG00000009521 #19 ENSANAG00000024738 TBL1X (ENSANAG00000032959) #22 GPR143 (ENSANAG00000034146) #23 ENSANAG00000014757 SHROOM2 (ENSANAG00000027946) #25 ENSANAG00000020812 WWC3 (ENSANAG00000023415) #27 CLCN4 (ENSANAG00000024160) #29 ENSANAG00000021221 #30 Simiiformes ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b.j ##22 Catarrhini ANCESTRAL SPECIES 43 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Cercopithecidae ANCESTRAL SPECIES 53 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Cercopithecinae ANCESTRAL SPECIES 44 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Cercopithecinae_a ANCESTRAL SPECIES 36 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 ENSGT00940000159832.i.g.b ENSGT00940000155375.d ENSGT00940000154443.b.b ENSGT00940000155202.i.a Macaca ANCESTRAL SPECIES 41 ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 ENSGT00940000159832.i.g.b ENSGT00940000155375.d ENSGT00940000154443.b.b ENSGT00940000155202.i.a Macaca_a ANCESTRAL SPECIES 29 ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 ENSGT00940000159832.i.g.b ENSGT00940000155375.d ENSGT00940000154443.b.b ENSGT00940000155202.i.a ENSGT00940000157452.k ENSGT00940000157452.l.a ENSGT00940000157452.l.b Crab-eating macaque MODERN SPECIES 174 RPS4Y1 (ENSMFAG00000055171) ZFY (ENSMFAG00000052850) ENSMFAG00000029941 ENSMFAG00000057015 #33 TBL1Y (ENSMFAG00000050736) ##22 ENSMFAG00000052639 ENSMFAG00000058259 ENSMFAG00000056494 USP9Y (ENSMFAG00000065535) DDX3Y (ENSMFAG00000060380) UTY (ENSMFAG00000063023) ENSMFAG00000063890 ENSMFAG00000053995 ENSMFAG00000049348 ENSMFAG00000051040 ENSMFAG00000047494 ENSMFAG00000061191 ENSMFAG00000050377 ENSMFAG00000052978 NLGN4Y (ENSMFAG00000038021) ##8 Rhesus MODERN SPECIES 328 ENSMMUG00000055976 SRY (ENSMMUG00000041853) RPS4Y1 (ENSMMUG00000038331) ZFY (ENSMMUG00000046378) AMELY (ENSMMUG00000038866) TBL1Y (ENSMMUG00000046495) ##22 ENSMMUG00000056331 ENSMMUG00000041468 ENSMMUG00000046892 USP9Y (ENSMMUG00000045991) DDX3Y (ENSMMUG00000043966) UTY (ENSMMUG00000038182) ENSMMUG00000055280 ENSMMUG00000042225 ENSMMUG00000042267 ENSMMUG00000061325 NLGN4Y (ENSMMUG00000040210) ##8 CYorf15A (ENSMMUG00000049104) KDM5D (ENSMMUG00000045017) ENSMMUG00000057579 EIF1AY (ENSMMUG00000043715) Rhinopithecus ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b.j ##22 Golden snub-nosed monkey MODERN SPECIES 281 ENSRROG00000017758 ##22 Hominoidea ANCESTRAL SPECIES 49 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Hominidae ANCESTRAL SPECIES 46 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES 50 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Homo/Pan group ANCESTRAL SPECIES 49 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT01040000241139 ENSGT00940000153421.a.a.a.a.b.j ##22 Human MODERN SPECIES 1828 SLC25A6 (ENSG00000292334) ASMTL (ENSG00000292339) P2RY8 (ENSG00000292333) AKAP17A (ENSG00000292343) ASMT (ENSG00000292336) DHRSX (ENSG00000292338) ZBED1 (ENSG00000292345) CD99 (ENSG00000292348) SRY (ENSG00000184895) RPS4Y1 (ENSG00000129824) ZFY (ENSG00000067646) TGIF2LY (ENSG00000176679) PCDH11Y (ENSG00000099715) TSPY2 (ENSG00000168757) AMELY (ENSG00000099721) TBL1Y (ENSG00000092377) ##22 TSPY4 (ENSG00000233803) TSPY8 (ENSG00000229549) TSPY3 (ENSG00000228927) TSPY1 (ENSG00000258992) TSPY9 (ENSG00000238074) TSPY10 (ENSG00000236424) USP9Y (ENSG00000114374) DDX3Y (ENSG00000067048) UTY (ENSG00000183878) TMSB4Y (ENSG00000154620) VCY (ENSG00000129864) ##17 VCY1B (ENSG00000129862) ##17 NLGN4Y (ENSG00000165246) ##8 CDY2B (ENSG00000129873) CDY2A (ENSG00000182415) Pan ANCESTRAL SPECIES 54 ENSGT00940000165583 ENSGT00390000005569.x.b.q.a ENSGT00940000153421.a.a.a.a.b.j ##22 ENSGT00940000159832.i.b Chimpanzee MODERN SPECIES 973 SRY (ENSPTRG00000022469) RPS4Y1 (ENSPTRG00000022470) ZFY (ENSPTRG00000022471) AMELY (ENSPTRG00000022474) ENSPTRG00000044388 ENSPTRG00000044034 TBL1Y (ENSPTRG00000022475) ##22 PRKY (ENSPTRG00000038881) ENSPTRG00000042614 ENSPTRG00000046004 NLGN4Y (ENSPTRG00000022494) ##8 ENSPTRG00000049568 #17 ENSPTRG00000044694 #17 TMSB4Y (ENSPTRG00000052699) UTY (ENSPTRG00000022489) ENSPTRG00000006940 DDX3Y (ENSPTRG00000022488) USP9Y (ENSPTRG00000022487) ENSPTRG00000021627 ENSPTRG00000022501 ENSPTRG00000042501 KDM5D (ENSPTRG00000022503) Tarsier MODERN SPECIES 1352 TBL1X (ENSTSYG00000010075) #22 GPR143 (ENSTSYG00000006058) #23 ENSTSYG00000028503 ENSTSYG00000031195 #25 Strepsirrhini ANCESTRAL SPECIES 23 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Lemuriformes ANCESTRAL SPECIES 48 ENSGT00940000162345 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a ENSGT00930000150973.A Lemuriformes_a ANCESTRAL SPECIES 126 ENSGT00940000163186 ENSGT00510000049811 ENSGT00940000162345 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Coquerels sifaka MODERN SPECIES 678 CD99 (ENSPCOG00000025203) GYG2 (ENSPCOG00000027345) ARSD (ENSPCOG00000025674) ARSL (ENSPCOG00000019857) ARSH (ENSPCOG00000020300) MXRA5 (ENSPCOG00000020228) PRKX (ENSPCOG00000017055) ENSPCOG00000024267 #8 PUDP (ENSPCOG00000017374) #12 STS (ENSPCOG00000019849) #13 PNPLA4 (ENSPCOG00000019870) #15 ANOS1 (ENSPCOG00000005754) #18 ENSPCOG00000020081 ENSPCOG00000017264 ENSPCOG00000016843 ENSPCOG00000025176 #22 GPR143 (ENSPCOG00000011131) #23 ENSPCOG00000016088 #25 ENSPCOG00000022009 #27 ENSPCOG00000000874 #27 CLCN4 (ENSPCOG00000013246) #29 MID1 (ENSPCOG00000019051) #30 HCCS (ENSPCOG00000022245) #31 ARHGAP6 (ENSPCOG00000021704) #32 AMELX (ENSPCOG00000020144) #33 Greater bamboo lemur MODERN SPECIES 619 ENSPSMG00000002231 #22 GPR143 (ENSPSMG00000002133) #23 ENSPSMG00000002115 #25 Mouse lemur MODERN SPECIES 169 ARHGAP6 (ENSMICG00000014376) #32 HCCS (ENSMICG00000014372) #31 MID1 (ENSMICG00000002488) #30 CLCN4 (ENSMICG00000002480) #29 WWC3 (ENSMICG00000002471) #27 MXRA5 (ENSMICG00000003692) PRKX (ENSMICG00000002892) ENSMICG00000046693 ENSMICG00000046354 #8 ENSMICG00000044079 ENSMICG00000036320 PUDP (ENSMICG00000017082) #12 STS (ENSMICG00000013455) #13 PNPLA4 (ENSMICG00000009614) #15 ANOS1 (ENSMICG00000015083) #18 ENSMICG00000010404 #22 GPR143 (ENSMICG00000010413) #23 SHROOM2 (ENSMICG00000045523) #25 ENSMICG00000007978 ENSMICG00000014241 SLITRK2 (ENSMICG00000003910) ENSMICG00000027545 ENSMICG00000030858 ENSMICG00000033128 ENSMICG00000034786 ENSMICG00000035061 SLITRK4 (ENSMICG00000036015) ENSMICG00000034247 ENSMICG00000017029 LDOC1 (ENSMICG00000034780) VAMP7 (ENSMICG00000001581) Bushbaby MODERN SPECIES 180 GYG2 (ENSOGAG00000005704) ARSD (ENSOGAG00000029890) ENSOGAG00000000152 ARSH (ENSOGAG00000006252) ARSF (ENSOGAG00000014227) MXRA5 (ENSOGAG00000025845) ENSOGAG00000034315 PRKX (ENSOGAG00000007329) ENSOGAG00000013201 #8 ENSOGAG00000033641 #8 PUDP (ENSOGAG00000006329) #12 STS (ENSOGAG00000006575) #13 PNPLA4 (ENSOGAG00000016901) #15 ANOS1 (ENSOGAG00000002477) #18 ENSOGAG00000032620 ENSOGAG00000011398 #22 GPR143 (ENSOGAG00000024603) #23 SHROOM2 (ENSOGAG00000026896) #25 ENSOGAG00000006267 #26 ENSOGAG00000001498 WWC3 (ENSOGAG00000016711) #27 CLCN4 (ENSOGAG00000014456) #29 ENSOGAG00000033369 MID1 (ENSOGAG00000014951) #30 ENSOGAG00000034817 HCCS (ENSOGAG00000003543) #31 ARHGAP6 (ENSOGAG00000003545) #32 AMELX (ENSOGAG00000034697) #33 MSL3 (ENSOGAG00000005030) #34 ENSOGAG00000028835 FRMPD4 (ENSOGAG00000008378) #35 Euarchontoglires_A ANCESTRAL SPECIES 11 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Glires ANCESTRAL SPECIES 10 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Rodentia ANCESTRAL SPECIES 10 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Rodentia_A ANCESTRAL SPECIES 9 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.eb.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Sciuridae ANCESTRAL SPECIES 56 ENSGT00940000162345 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00940000155202.i.a ENSGT00940000154443.b.b ENSGT00940000155375.d Marmotini ANCESTRAL SPECIES 94 ENSGT00440000039314.a.f ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00940000155202.i.a ENSGT00940000154443.b.b ENSGT00940000155375.d Marmotini_b ANCESTRAL SPECIES 179 ENSGT01050000244840.B ENSGT00440000039314.a.f ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.j.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.i ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 Squirrel MODERN SPECIES 244 ENSSTOG00000025091 CD99 (ENSSTOG00000021254) ARSD (ENSSTOG00000019946) ENSSTOG00000024642 ENSSTOG00000034793 ENSSTOG00000029621 PRKX (ENSSTOG00000022705) ENSSTOG00000020714 ENSSTOG00000025226 ENSSTOG00000028400 ENSSTOG00000020015 ENSSTOG00000023040 #8 STS (ENSSTOG00000020247) #13 PNPLA4 (ENSSTOG00000024808) #15 ANOS1 (ENSSTOG00000000380) #18 ENSSTOG00000014293 #22 GPR143 (ENSSTOG00000014309) #23 SHROOM2 (ENSSTOG00000005794) #25 Arctic ground squirrel MODERN SPECIES 629 ENSUPAG00010011802 #22 GPR143 (ENSUPAG00010011834) #23 SHROOM2 (ENSUPAG00010011844) #25 ENSUPAG00010011862 #26 Alpin marmot MODERN SPECIES 102 ENSMMMG00000024654 ARSH (ENSMMMG00000024653) MXRA5 (ENSMMMG00000024652) PRKX (ENSMMMG00000024651) ENSMMMG00000024650 #8 PUDP (ENSMMMG00000024649) #12 STS (ENSMMMG00000024648) #13 PNPLA4 (ENSMMMG00000024647) #15 ANOS1 (ENSMMMG00000024646) #18 ENSMMMG00000024644 #22 GPR143 (ENSMMMG00000024643) #23 ENSMMMG00000024641 #25 ENSMMMG00000024640 #25 ENSMMMG00000024639 #26 UTY (ENSMMMG00000022708) ENSMMMG00000022521 DDX3Y (ENSMMMG00000022509) USP9Y (ENSMMMG00000022494) ENSMMMG00000022486 Eurasian red squirrel MODERN SPECIES 156 ASMT (ENSSVLG00005024679) DHRSX (ENSSVLG00005024652) ARSD (ENSSVLG00005024327) ARSL (ENSSVLG00005024133) ARSH (ENSSVLG00005024093) MXRA5 (ENSSVLG00005024063) PRKX (ENSSVLG00005024043) ENSSVLG00005024020 ENSSVLG00005023971 #8 PUDP (ENSSVLG00005023945) #12 STS (ENSSVLG00005023818) #13 PNPLA4 (ENSSVLG00005023753) #15 ENSSVLG00005023735 ENSSVLG00005023716 ANOS1 (ENSSVLG00005023647) #18 ENSSVLG00005023601 #22 GPR143 (ENSSVLG00005023537) #23 ENSSVLG00005023499 #25 ENSSVLG00005023472 ENSSVLG00005023446 #26 ENSSVLG00005023419 #26 WWC3 (ENSSVLG00005023378) #27 CLCN4 (ENSSVLG00005023297) #29 ENSSVLG00005023260 MID1 (ENSSVLG00005023238) #30 ENSSVLG00005023195 #31 ENSSVLG00005023027 #32 ENSSVLG00005022888 #33 MSL3 (ENSSVLG00005022550) #34 FRMPD4 (ENSSVLG00005021689) #35 PRPS2 (ENSSVLG00005021523) #36 Hystricomorpha ANCESTRAL SPECIES 67 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT01030000235420 ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00520000056155 Naked mole-rat female MODERN SPECIES 30 ENSHGLG00000046568 ENSHGLG00000041141 ENSHGLG00000045286 ENSHGLG00000013283 ENSHGLG00000012945 ENSHGLG00000015915 ENSHGLG00000039683 ENSHGLG00000015869 ENSHGLG00000046086 MYRIP (ENSHGLG00000033941) EIF1B (ENSHGLG00000049723) ENTPD3 (ENSHGLG00000015750) RPL14 (ENSHGLG00000048756) ENSHGLG00000034341 ENSHGLG00000014689 ENSHGLG00000000673 #22 ENSHGLG00000000693 #23 ENSHGLG00000006868 ACOT12 (ENSHGLG00000006134) ZCCHC9 (ENSHGLG00000041209) CKMT2 (ENSHGLG00000005442) ENSHGLG00000004494 ENSHGLG00000039829 ENSHGLG00000047767 ENSHGLG00000050164 FAM151B (ENSHGLG00000009614) ENSHGLG00000048104 ENSHGLG00000016542 ENSHGLG00000037044 ENSHGLG00000016331 ENSHGLG00000012824 Hystricomorpha_a ANCESTRAL SPECIES 82 ENSGT00940000154287.a ENSGT00510000049974 ENSGT00520000055993.f ENSGT00440000039314.a.e.a.a ENSGT00940000161561 ENSGT00940000161628 ENSGT00940000163319 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.e ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00520000056155 Guinea pig MODERN SPECIES 126 ENSCPOG00000008086 #22 GPR143 (ENSCPOG00000007501) #23 ENSCPOG00000010309 #25 ENSCPOG00000037460 ANOS1 (ENSCPOG00000013143) #18 Hystricomorpha_b ANCESTRAL SPECIES 116 ENSGT00940000154287.a ENSGT00510000049974 ENSGT00520000055993.f ENSGT00440000039314.a.e.a.a ENSGT00940000161561 ENSGT00940000161628 ENSGT00940000163319 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.e ENSGT00940000156607.a.a #8 ENSGT00390000014753.h #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 Long-tailed chinchilla MODERN SPECIES 206 SHOX (ENSCLAG00000000063) ENSCLAG00000000068 ENSCLAG00000000101 ENSCLAG00000000107 ASMT (ENSCLAG00000000340) GYG2 (ENSCLAG00000000399) ARSL (ENSCLAG00000000445) MXRA5 (ENSCLAG00000000278) PRKX (ENSCLAG00000000304) ENSCLAG00000000341 ENSCLAG00000000393 #8 PUDP (ENSCLAG00000000477) #12 STS (ENSCLAG00000000517) #13 PNPLA4 (ENSCLAG00000000140) #15 ANOS1 (ENSCLAG00000000196) #18 ENSCLAG00000000233 #22 GPR143 (ENSCLAG00000000235) #23 SHROOM2 (ENSCLAG00000000344) #25 Degu MODERN SPECIES 369 ENSODEG00000000294 #22 GPR143 (ENSODEG00000000196) #23 ENSODEG00000000177 #25 Rodentia_B ANCESTRAL SPECIES 95 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 Myomorpha ANCESTRAL SPECIES 109 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 Muroidea ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b #22 Muroidea_A ANCESTRAL SPECIES 7 ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506 ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.b.a #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000005717.e.a.b #26 ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B ENSGT00520000056155.g.b.b ENSGT00390000015719.d ENSGT00940000155485.e ENSGT00940000164194 Cricetidae ANCESTRAL SPECIES 8 ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.b.a #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.a ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00940000162492.f ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B ENSGT00520000056155.g.b.b Cricetidae_B ANCESTRAL SPECIES 36 ENSGT00390000008256.j.a.a ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.b.a #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00940000162492.f ENSGT00530000063484.b.b ENSGT01090000260076.b.b ENSGT00940000155485.f.b ENSGT00940000155485.f.a.a ENSGT00940000164194 ENSGT00940000155485.e ENSGT00390000015719.d Northern American deer mouse MODERN SPECIES 475 Sms (ENSPEMG00000003756) Phex (ENSPEMG00000017527) Ptchd1 (ENSPEMG00000024561) Prdx4 (ENSPEMG00000015131) ENSPEMG00000017644 ENSPEMG00000028779 ENSPEMG00000002650 Sat1 (ENSPEMG00000001319) ENSPEMG00000025993 #26 ENSPEMG00000026202 #26 Cldn34b4 (ENSPEMG00000003717) #26 ENSPEMG00000026374 #26 ENSPEMG00000025316 ENSPEMG00000025248 ENSPEMG00000029386 #26 Tbl1x (ENSPEMG00000017480) #22 ENSPEMG00000030079 #26 Prkx (ENSPEMG00000030408) Pbsn (ENSPEMG00000012253) ENSPEMG00000023281 ENSPEMG00000027218 ENSPEMG00000015794 ENSPEMG00000024840 ENSPEMG00000023943 ENSPEMG00000030251 4930480E11Rik (ENSPEMG00000028721) Prrg1 (ENSPEMG00000030282) Fam47c (ENSPEMG00000030109) Cfap47 (ENSPEMG00000022325) ENSPEMG00000028268 Mageb16 (ENSPEMG00000023768) Prairie vole MODERN SPECIES 360 Srpx2 (ENSMOCG00000003969) Tspan6 (ENSMOCG00000001068) Tnmd (ENSMOCG00000000192) Pcdh19 (ENSMOCG00000013710) ENSMOCG00000016427 Diaph2 (ENSMOCG00000004544) ENSMOCG00000008368 ENSMOCG00000018722 Prrg1 (ENSMOCG00000015594) ENSMOCG00000019110 Cfap47 (ENSMOCG00000020168) ENSMOCG00000018300 Mageb16 (ENSMOCG00000002574) ENSMOCG00000019029 ENSMOCG00000013562 Tbl1x (ENSMOCG00000002063) #22 Prkx (ENSMOCG00000003139) Pbsn (ENSMOCG00000005173) ENSMOCG00000019602 Msn (ENSMOCG00000010407) Vsig4 (ENSMOCG00000000197) Hsf3 (ENSMOCG00000003224) Heph (ENSMOCG00000017685) Gpr165 (ENSMOCG00000003694) Pgr15l (ENSMOCG00000004906) Eda2r (ENSMOCG00000020804) ENSMOCG00000017157 ENSMOCG00000001177 ENSMOCG00000018755 Ophn1 (ENSMOCG00000011502) Yipf6 (ENSMOCG00000004509) Cricetinae ANCESTRAL SPECIES 17 ENSGT00940000155886 ENSGT00950000183163.b ENSGT00950000182941.b.b ENSGT00390000008256.j.b ENSGT00940000159370 ENSGT00940000156709 ENSGT00940000162424 ENSGT00390000017542 ENSGT00510000048066 ENSGT00870000136506.cc.a ENSGT00940000157313 ENSGT00940000157080 ENSGT00940000153430.a.a ENSGT00390000005330 ENSGT00950000183121.b.b.b.b ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.a ENSGT00940000158538 ENSGT00940000162492.f ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B ENSGT00390000015719.d ENSGT01090000260076.b.b Golden Hamster MODERN SPECIES 695 Nup155 (ENSMAUG00000003381) Wdr70 (ENSMAUG00000007958) Gdnf (ENSMAUG00000019401) Egflam (ENSMAUG00000015382) Lifr (ENSMAUG00000015733) Osmr (ENSMAUG00000019728) Rictor (ENSMAUG00000013015) Fyb (ENSMAUG00000001181) C9 (ENSMAUG00000018301) ENSMAUG00000015397 Ptger4 (ENSMAUG00000014264) Ptchd1 (ENSMAUG00000002646) Prdx4 (ENSMAUG00000021607) ENSMAUG00000008759 Sat1 (ENSMAUG00000019369) Tbl1x (ENSMAUG00000006903) #22 ENSMAUG00000016228 #26 ENSMAUG00000018492 Prkx (ENSMAUG00000016058) Pbsn (ENSMAUG00000012035) Chinese hamster chok1gshd MODERN SPECIES 230 Smpx (ENSCGRG00001020401) MBTPS2 (ENSCGRG00001018020) ENSCGRG00001000646 Phex (ENSCGRG00001019759) ENSCGRG00001015986 ENSCGRG00001015828 Ptchd1 (ENSCGRG00001010854) Prdx4 (ENSCGRG00001009299) ENSCGRG00001000350 SAT1 (ENSCGRG00001022103) ENSCGRG00001013998 #26 Cldn34d (ENSCGRG00001014236) #26 ENSCGRG00001013899 ENSCGRG00001017212 ENSCGRG00001013770 Tbl1x (ENSCGRG00001016098) #22 Prkx (ENSCGRG00001011584) Pbsn (ENSCGRG00001011020) ENSCGRG00001000213 ENSCGRG00001019539 ENSCGRG00001017585 ENSCGRG00001000265 ENSCGRG00001019344 Prrg1 (ENSCGRG00001018689) ENSCGRG00001016254 Fam47c (ENSCGRG00001013363) ENSCGRG00001015309 ENSCGRG00001013088 Cfap47 (ENSCGRG00001011946) Mageb16 (ENSCGRG00001005887) ENSCGRG00001013660 Murinae ANCESTRAL SPECIES 14 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b ENSGT00950000182841.b.a.a.a.i.a.b ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00720000109445 ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B ENSGT00520000056155.g.b.b Mus ANCESTRAL SPECIES 9 ENSGT01100000263574.b.j ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000158553.b.a ENSGT00720000109445 ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B Mus_A ANCESTRAL SPECIES 15 ENSGT00390000001700.a.b.b ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000158553.b.a ENSGT00720000109445 ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a ENSGT00390000011425.B Mus_B ANCESTRAL SPECIES 14 ENSGT00940000159803 ENSGT00510000047092 ENSGT00940000158744 ENSGT00390000005685 ENSGT00940000160294 ENSGT00940000154783.f ENSGT00390000012647.d ENSGT00390000006885.a ENSGT00390000000360.r.b.a.a ENSGT00390000018904 ENSGT00940000158132 ENSGT00950000183097.a.a.a ENSGT00390000005717.e.b.b.a.e.a #26 ENSGT00390000005717.e.b.b.b #26 ENSGT00390000005717.e.b.a #26 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.f.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.c.b.e ENSGT00940000163515.j ENSGT00940000158538 ENSGT00940000163515.i ENSGT00940000159699 ENSGT00940000162825 ENSGT00530000063484.b.b ENSGT00940000158553.b.a ENSGT00720000109445 ENSGT00940000154342.C ENSGT00950000182841.b.a.a.a.j ENSGT00940000159499 ENSGT01000000214434.B.b.e.a Mouse MODERN SPECIES 37 Gab3 (ENSMUSG00000032750) Dkc1 (ENSMUSG00000031403) Mpp1 (ENSMUSG00000031402) Smim9 (ENSMUSG00000073094) F8 (ENSMUSG00000031196) Fundc2 (ENSMUSG00000031198) Cmc4 (ENSMUSG00000090110) Mtcp1 (ENSMUSG00000031200) Brcc3 (ENSMUSG00000031201) Vbp1 (ENSMUSG00000031197) Rab39b (ENSMUSG00000031202) Pls3 (ENSMUSG00000016382) Cldn34b3 (ENSMUSG00000071738) #26 Cldn34b4 (ENSMUSG00000073085) #26 Cldn34d (ENSMUSG00000079525) #26 Tbl1x (ENSMUSG00000025246) #22 Prkx (ENSMUSG00000035725) Pbsn (ENSMUSG00000000003) Gm14744 (ENSMUSG00000079522) 5430402E10Rik (ENSMUSG00000044121) Obp1a (ENSMUSG00000067684) Gm5938 (ENSMUSG00000079521) Obp1b (ENSMUSG00000067679) Gm14743 (ENSMUSG00000079519) 4930480E11Rik (ENSMUSG00000035651) Prrg1 (ENSMUSG00000047996) Fam47c (ENSMUSG00000078315) Cfap47 (ENSMUSG00000073077) Mageb16 (ENSMUSG00000046942) Tmem47 (ENSMUSG00000025666) 4930595M18Rik (ENSMUSG00000060673) Mus_C ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b #22 Steppe mouse MODERN SPECIES 1967 Tbl1x (ENSMSIG00000031586) #22 spretus MODERN SPECIES 19 Mpp1 (MGP_SPRETEiJ_G0034352) Smim9 (MGP_SPRETEiJ_G0034353) F8 (MGP_SPRETEiJ_G0034354) Fundc2 (MGP_SPRETEiJ_G0034355) Cmc4 (MGP_SPRETEiJ_G0034356) Mtcp1 (MGP_SPRETEiJ_G0034357) Brcc3 (MGP_SPRETEiJ_G0034358) Vbp1 (MGP_SPRETEiJ_G0034359) Rab39b (MGP_SPRETEiJ_G0034360) Pls3 (MGP_SPRETEiJ_G0034361) MGP_SPRETEiJ_G0034362 #26 MGP_SPRETEiJ_G0034363 #26 MGP_SPRETEiJ_G0034364 #26 Cldn34b4 (MGP_SPRETEiJ_G0034365) #26 Cldn34d (MGP_SPRETEiJ_G0034366) #26 Tbl1x (MGP_SPRETEiJ_G0034367) #22 Prkx (MGP_SPRETEiJ_G0034368) MGP_SPRETEiJ_G0034369 MGP_SPRETEiJ_G0034370 MGP_SPRETEiJ_G0034371 4930480E11Rik (MGP_SPRETEiJ_G0034372) Prrg1 (MGP_SPRETEiJ_G0034373) Fam47c (MGP_SPRETEiJ_G0034374) MGP_SPRETEiJ_G0034375 Tmem47 (MGP_SPRETEiJ_G0034376) 4930595M18Rik (MGP_SPRETEiJ_G0034377) Dmd (MGP_SPRETEiJ_G0034378) Tsga8 (MGP_SPRETEiJ_G0034379) Fthl17a (MGP_SPRETEiJ_G0034380) MGP_SPRETEiJ_G0034381 Gk (MGP_SPRETEiJ_G0034382) Ryukyu mouse MODERN SPECIES 19 Ikbkg (MGP_CAROLIEiJ_G0033187) G6pdx (MGP_CAROLIEiJ_G0033188) Or7r1 (MGP_CAROLIEiJ_G0033189) Or13ae2 (MGP_CAROLIEiJ_G0033190) Dkc1 (MGP_CAROLIEiJ_G0033191) Mpp1 (MGP_CAROLIEiJ_G0033192) Smim9 (MGP_CAROLIEiJ_G0033193) F8 (MGP_CAROLIEiJ_G0033194) Fundc2 (MGP_CAROLIEiJ_G0033195) Cmc4 (MGP_CAROLIEiJ_G0033196) Mtcp1 (MGP_CAROLIEiJ_G0033197) MGP_CAROLIEiJ_G0033198 Pls3 (MGP_CAROLIEiJ_G0033199) Cldn34b4 (MGP_CAROLIEiJ_G0033200) #26 Cldn34d (MGP_CAROLIEiJ_G0033201) #26 Tbl1x (MGP_CAROLIEiJ_G0033202) #22 Prkx (MGP_CAROLIEiJ_G0033203) Pbsn (MGP_CAROLIEiJ_G0033204) MGP_CAROLIEiJ_G0033206 MGP_CAROLIEiJ_G0033205 Prrg1 (MGP_CAROLIEiJ_G0033207) Fam47c (MGP_CAROLIEiJ_G0033208) MGP_CAROLIEiJ_G0033209 Mageb16 (MGP_CAROLIEiJ_G0033210) Tmem47 (MGP_CAROLIEiJ_G0033211) MGP_CAROLIEiJ_G0033212 Dmd (MGP_CAROLIEiJ_G0033213) MGP_CAROLIEiJ_G0033214 Fthl17a (MGP_CAROLIEiJ_G0033215) MGP_CAROLIEiJ_G0033216 Gk (MGP_CAROLIEiJ_G0033217) Shrew mouse MODERN SPECIES 23 G6pdx (MGP_PahariEiJ_G0031731) Or7r1 (MGP_PahariEiJ_G0031732) Or13ae2 (MGP_PahariEiJ_G0031733) Gab3 (MGP_PahariEiJ_G0031734) Dkc1 (MGP_PahariEiJ_G0031735) Mpp1 (MGP_PahariEiJ_G0031736) Smim9 (MGP_PahariEiJ_G0031737) F8 (MGP_PahariEiJ_G0031738) Fundc2 (MGP_PahariEiJ_G0031739) Cmc4 (MGP_PahariEiJ_G0031740) Mtcp1 (MGP_PahariEiJ_G0031741) Brcc3 (MGP_PahariEiJ_G0031742) Pls3 (MGP_PahariEiJ_G0031743) Cldn34b4 (MGP_PahariEiJ_G0031744) #26 Cldn34d (MGP_PahariEiJ_G0031745) #26 Tbl1x (MGP_PahariEiJ_G0031746) #22 Prkx (MGP_PahariEiJ_G0031747) Pbsn (MGP_PahariEiJ_G0031748) MGP_PahariEiJ_G0031749 Prrg1 (MGP_PahariEiJ_G0031750) Fam47c (MGP_PahariEiJ_G0031751) MGP_PahariEiJ_G0031752 Mageb16 (MGP_PahariEiJ_G0031753) Tmem47 (MGP_PahariEiJ_G0031754) 4930595M18Rik (MGP_PahariEiJ_G0031755) Dmd (MGP_PahariEiJ_G0031756) Fthl17a (MGP_PahariEiJ_G0031757) MGP_PahariEiJ_G0031758 Gk (MGP_PahariEiJ_G0031759) Tasl (MGP_PahariEiJ_G0031760) Nr0b1 (MGP_PahariEiJ_G0031761) Rat MODERN SPECIES 46 Prdx4 (ENSRNOG00000003763) Acot9 (ENSRNOG00000003782) LOC102557137 (ENSRNOG00000059697) Sat1 (ENSRNOG00000003809) Cldn34b (ENSRNOG00000071107) #26 Magea10-ps4 (ENSRNOG00000066349) ENSRNOG00000068897 Magea10-ps5 (ENSRNOG00000064790) LOC100362173 (ENSRNOG00000029158) #26 LOC680190 (ENSRNOG00000065503) #26 AABR07038250.1 (ENSRNOG00000003860) ENSRNOG00000064007 Cldn34d (ENSRNOG00000043402) #26 LOC317456 (ENSRNOG00000003883) AABR07038269.1 (ENSRNOG00000050081) Tbl1x (ENSRNOG00000003686) #22 Cldn34e (ENSRNOG00000026351) #26 Bnip3-ps3 (ENSRNOG00000065427) Prkx (ENSRNOG00000060168) Pbsn (ENSRNOG00000003713) Obp1f (ENSRNOG00000063224) Obp1f (ENSRNOG00000062551) Magea4 (ENSRNOG00000062420) Ptges3l1 (ENSRNOG00000060486) Sts (ENSRNOG00000032487) #13 Pnpla4 (ENSRNOG00000026157) #15 RGD1563378 (ENSRNOG00000067596) Prrg1 (ENSRNOG00000026044) ENSRNOG00000064865 Fam47a (ENSRNOG00000003836) Cfap47 (ENSRNOG00000030048) Upper Galilee mountains blind mole rat MODERN SPECIES 1370 Tbl1x (ENSNGAG00000000328) #22 Lesser Egyptian jerboa MODERN SPECIES 147 ENSJJAG00000003177 #18 ENSJJAG00000004898 Tbl1x (ENSJJAG00000006406) #22 ENSJJAG00000006859 #25 ENSJJAG00000007541 #23 ENSJJAG00000008028 ENSJJAG00000009450 Sh3kbp1 (ENSJJAG00000011003) Map3k15 (ENSJJAG00000012581) Pdha1 (ENSJJAG00000013156) Adgrg2 (ENSJJAG00000016266) ENSJJAG00000000145 Ppef1 (ENSJJAG00000000417) Rs1 (ENSJJAG00000000704) Cdkl5 (ENSJJAG00000011323) Rai2 (ENSJJAG00000011458) Nhs (ENSJJAG00000012415) ENSJJAG00000012765 Laurasiatheria ANCESTRAL SPECIES 16 ENSGT00940000162345 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b #22 Common shrew MODERN SPECIES 225 ENSSARG00000011567 #22 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Equus DUPLICATION Equus ANCESTRAL SPECIES 48 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.d ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.c ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b.a #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.o #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Donkey MODERN SPECIES 24 ARSL (ENSEASG00005023698) ARSH (ENSEASG00005018718) ARSF (ENSEASG00005018721) MXRA5 (ENSEASG00005010581) PRKX (ENSEASG00005010584) ENSEASG00005013063 ENSEASG00005004375 ENSEASG00005028581 ENSEASG00005004367 ENSEASG00005015472 ENSEASG00005033693 #8 PUDP (ENSEASG00005015403) #12 STS (ENSEASG00005011374) #13 PNPLA4 (ENSEASG00005037321) #15 ANOS1 (ENSEASG00005015192) #18 ENSEASG00005022688 #22 GPR143 (ENSEASG00005026627) #23 ENSEASG00005038719 #25 CLDN34 (ENSEASG00005022698) #26 ENSEASG00005022700 WWC3 (ENSEASG00005020725) #27 ENSEASG00005020752 #29 Horse MODERN SPECIES 480 MXRA5 (ENSECAG00000017487) PRKX (ENSECAG00000000012) ENSECAG00000000093 ENSECAG00000057758 ENSECAG00000044468 ENSECAG00000000182 ENSECAG00000032353 ENSECAG00000029340 ENSECAG00000000408 ENSECAG00000000709 #8 PUDP (ENSECAG00000009014) #12 STS (ENSECAG00000009398) #13 PNPLA4 (ENSECAG00000013103) #15 ANOS1 (ENSECAG00000035101) #18 ENSECAG00000015264 ENSECAG00000015324 #22 GPR143 (ENSECAG00000010648) #23 SHROOM2 (ENSECAG00000012150) #25 CLDN34 (ENSECAG00000005133) #26 ENSECAG00000005232 WWC3 (ENSECAG00000013186) #27 CLCN4 (ENSECAG00000016806) #29 MID1 (ENSECAG00000019648) #30 HCCS (ENSECAG00000009436) #31 ARHGAP6 (ENSECAG00000013633) #32 AMELX (ENSECAG00000016413) #33 MSL3 (ENSECAG00000016699) #34 FRMPD4 (ENSECAG00000000153) #35 PRPS2 (ENSECAG00000024711) #36 TLR7 (ENSECAG00000007883) TLR8 (ENSECAG00000009180) Equus ANCESTRAL SPECIES ENSGT00940000153421.a.a.a.a.b.b #22 Donkey MODERN SPECIES 37 SRY (ENSEASG00005035549) ENSEASG00005023765 ENSEASG00005014703 ENSEASG00005034241 ENSEASG00005037328 ENSEASG00005035173 ENSEASG00005026200 ENSEASG00005017764 ENSEASG00005022529 ENSEASG00005025009 ENSEASG00005037796 ENSEASG00005038269 #33 ENSEASG00005010760 ENSEASG00005030729 ENSEASG00005017881 ENSEASG00005022686 #22 ENSEASG00005022690 ENSEASG00005022694 #25 ENSEASG00005012884 ENSEASG00005012087 ENSEASG00005031831 ENSEASG00005028547 ENSEASG00005034760 RAB9A (ENSEASG00005034868) TCEANC (ENSEASG00005016497) EGFL6 (ENSEASG00005016498) ENSEASG00005028709 TLR8 (ENSEASG00005025097) TLR7 (ENSEASG00005035985) PRPS2 (ENSEASG00005020912) #36 FRMPD4 (ENSEASG00005020904) #35 Chiroptera ANCESTRAL SPECIES 25 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000170830 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Megabat MODERN SPECIES 3716 ENSPVAG00000000854 #22 Microchiroptera ANCESTRAL SPECIES 25 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000170830 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Microbat DUPLICATION Microbat MODERN SPECIES 1475 ENSMLUG00000027637 #22 GPR143 (ENSMLUG00000002457) #23 SHROOM2 (ENSMLUG00000006048) #25 ENSMLUG00000028804 #26 ENSMLUG00000025198 WWC3 (ENSMLUG00000006838) #27 ENSMLUG00000002788 CLCN4 (ENSMLUG00000006866) #29 Microbat MODERN SPECIES 1268 ANAPC1 (ENSMLUG00000014399) ENSMLUG00000007404 ENSMLUG00000016079 MRPS5 (ENSMLUG00000003183) PROM2 (ENSMLUG00000008761) KCNIP3 (ENSMLUG00000006055) FAHD2A (ENSMLUG00000023813) GPAT2 (ENSMLUG00000008062) ADRA2B (ENSMLUG00000023263) DUSP2 (ENSMLUG00000028013) STARD7 (ENSMLUG00000008139) PDCL3 (ENSMLUG00000016446) NMS (ENSMLUG00000003896) CHST10 (ENSMLUG00000014170) ENSMLUG00000024883 ENSMLUG00000006516 #22 Greater horseshoe bat MODERN SPECIES CD99 (ENSRFEG00010004377) XG (ENSRFEG00010004330) GYG2 (ENSRFEG00010004271) ARSD (ENSRFEG00010004219) ARSH (ENSRFEG00010004185) ARSF (ENSRFEG00010004022) MXRA5 (ENSRFEG00010003957) PRKX (ENSRFEG00010003940) ENSRFEG00010003924 ENSRFEG00010003910 ENSRFEG00010003882 #8 PUDP (ENSRFEG00010003859) #12 STS (ENSRFEG00010003830) #13 PNPLA4 (ENSRFEG00010018899) #15 ANOS1 (ENSRFEG00010018777) #18 ENSRFEG00010018688 #22 GPR143 (ENSRFEG00010018587) #23 SHROOM2 (ENSRFEG00010018546) #25 ENSRFEG00010018513 #26 ENSRFEG00010018484 #26 WWC3 (ENSRFEG00010018414) #27 ENSRFEG00010018388 CLCN4 (ENSRFEG00010018295) #29 MID1 (ENSRFEG00010018194) #30 HCCS (ENSRFEG00010018161) #31 AMELX (ENSRFEG00010018067) #33 ARHGAP6 (ENSRFEG00010017791) #32 ENSRFEG00010017575 #34 FRMPD4 (ENSRFEG00010016886) #35 PRPS2 (ENSRFEG00010016807) #36 TLR7 (ENSRFEG00010016759) Carnivora ANCESTRAL SPECIES 11 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00940000161922.j ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Felidae ANCESTRAL SPECIES 12 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00940000161922.j ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000183087.A.a.b.a.j.b ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 Panthera ANCESTRAL SPECIES 41 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000183087.A.a.b.a.j.b ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Tiger MODERN SPECIES 53 ENSPTIG00000014778 #22 GPR143 (ENSPTIG00000014729) #23 Panthera_a ANCESTRAL SPECIES 40 ENSGT00940000164022 ENSGT00940000163186 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000183087.A.a.b.a.j.b ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT01020000232259 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 leopard MODERN SPECIES 71 ENSPPRG00000007424 #8 PUDP (ENSPPRG00000007178) #12 STS (ENSPPRG00000006987) #13 PNPLA4 (ENSPPRG00000006161) #15 ANOS1 (ENSPPRG00000005978) #18 ENSPPRG00000005504 #22 GPR143 (ENSPPRG00000002506) #23 ENSPPRG00000002449 #25 ENSPPRG00000002391 #25 WWC3 (ENSPPRG00000001777) #27 CLCN4 (ENSPPRG00000001373) #29 MID1 (ENSPPRG00000000611) #30 HCCS (ENSPPRG00000023032) #31 ARHGAP6 (ENSPPRG00000023482) #32 AMELX (ENSPPRG00000023933) #33 MSL3 (ENSPPRG00000024561) #34 FRMPD4 (ENSPPRG00000018040) #35 ENSPPRG00000013990 PRPS2 (ENSPPRG00000013035) #36 TLR7 (ENSPPRG00000012499) TLR8 (ENSPPRG00000011696) lion MODERN SPECIES 88 POLA1 (ENSPLOG00000016946) ARX (ENSPLOG00000017861) ENSPLOG00000017948 ENSPLOG00000018008 ENSPLOG00000018034 ARSL (ENSPLOG00000018103) ARSH (ENSPLOG00000018317) ARSF (ENSPLOG00000018404) MXRA5 (ENSPLOG00000018525) PRKX (ENSPLOG00000018600) ENSPLOG00000018727 #8 PUDP (ENSPLOG00000018856) #12 STS (ENSPLOG00000018921) #13 PNPLA4 (ENSPLOG00000019079) #15 ANOS1 (ENSPLOG00000019165) #18 ENSPLOG00000019290 #22 GPR143 (ENSPLOG00000019393) #23 ENSPLOG00000019475 #25 ENSPLOG00000019520 #26 WWC3 (ENSPLOG00000019546) #27 CLCN4 (ENSPLOG00000019599) #29 MID1 (ENSPLOG00000019686) #30 HCCS (ENSPLOG00000019784) #31 ARHGAP6 (ENSPLOG00000019926) #32 AMELX (ENSPLOG00000020208) #33 ENSPLOG00000020441 MSL3 (ENSPLOG00000020518) #34 FRMPD4 (ENSPLOG00000020782) #35 ENSPLOG00000021367 ENSPLOG00000021390 PRPS2 (ENSPLOG00000021410) #36 Cat MODERN SPECIES 252 ENSFCAG00000049439 XG (ENSFCAG00000043945) GYG2 (ENSFCAG00000010296) ARSD (ENSFCAG00000019165) ARSL (ENSFCAG00000005924) ARSH (ENSFCAG00000029487) ARSF (ENSFCAG00000012369) MXRA5 (ENSFCAG00000012142) PRKX (ENSFCAG00000030120) ENSFCAG00000051037 ENSFCAG00000000375 #8 ENSFCAG00000034302 #12 STS (ENSFCAG00000024019) #13 PNPLA4 (ENSFCAG00000004082) #15 ANOS1 (ENSFCAG00000004854) #18 ENSFCAG00000011563 #22 GPR143 (ENSFCAG00000021932) #23 SHROOM2 (ENSFCAG00000043376) #25 ENSFCAG00000047818 #26 ENSFCAG00000022520 WWC3 (ENSFCAG00000011192) #27 CLCN4 (ENSFCAG00000007631) #29 MID1 (ENSFCAG00000002582) #30 HCCS (ENSFCAG00000022393) #31 ARHGAP6 (ENSFCAG00000002122) #32 AMELX (ENSFCAG00000023640) #33 ENSFCAG00000030523 MSL3 (ENSFCAG00000002794) #34 FRMPD4 (ENSFCAG00000006682) #35 ENSFCAG00000039079 PRPS2 (ENSFCAG00000026323) #36 Caniformia ANCESTRAL SPECIES 26 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Canidae ANCESTRAL SPECIES 26 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000160340.c.c.b.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.f ENSGT01050000244868.a.a.a.b.a.b.a.a.a.e.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.e.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Canis_lupus ANCESTRAL SPECIES 26 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000160340.c.c.b.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.f ENSGT01050000244868.a.a.a.b.a.b.a.a.a.e.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.e.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00940000158012.c.a.a.b.b.b ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Dog MODERN SPECIES 144 ENSCAFG00845022614 GYG2 (ENSCAFG00845022845) ARSL (ENSCAFG00845023249) ARSH (ENSCAFG00845023726) ARSF (ENSCAFG00845023881) MXRA5 (ENSCAFG00845023994) ENSCAFG00845024116 ENSCAFG00845024207 ENSCAFG00845024250 OBP (ENSCAFG00845024305) ENSCAFG00845024690 #8 PUDP (ENSCAFG00845025128) #12 STS (ENSCAFG00845025194) #13 PNPLA4 (ENSCAFG00845024459) #15 ANOS1 (ENSCAFG00845024786) #18 TBL1X (ENSCAFG00845025373) #22 GPR143 (ENSCAFG00845025566) #23 ENSCAFG00845025754 #25 ENSCAFG00845025833 #27 CLCN4 (ENSCAFG00845026001) #29 MID1 (ENSCAFG00845026369) #30 HCCS (ENSCAFG00845026624) #31 ARHGAP6 (ENSCAFG00845026713) #32 ENSCAFG00845026844 #33 ENSCAFG00845027078 MSL3 (ENSCAFG00845027243) #34 ENSCAFG00845027491 FRMPD4 (ENSCAFG00845027637) #35 ENSCAFG00845028207 PRPS2 (ENSCAFG00845028237) #36 TLR7 (ENSCAFG00845028303) Dingo MODERN SPECIES 217 ARSD (ENSCAFG00020001625) ARSL (ENSCAFG00020001641) ARSH (ENSCAFG00020001647) ARSF (ENSCAFG00020001661) MXRA5 (ENSCAFG00020001680) PRKX (ENSCAFG00020001689) ENSCAFG00020001708 ENSCAFG00020001728 ENSCAFG00020001749 ENSCAFG00020001786 #8 PUDP (ENSCAFG00020001818) #12 STS (ENSCAFG00020001851) #13 PNPLA4 (ENSCAFG00020002013) #15 ANOS1 (ENSCAFG00020002032) #18 ENSCAFG00020002080 ENSCAFG00020002098 #22 GPR143 (ENSCAFG00020002110) #23 ENSCAFG00020002128 #25 ENSCAFG00020002145 ENSCAFG00020002147 #26 ENSCAFG00020002156 #27 WWC3 (ENSCAFG00020002166) #27 CLCN4 (ENSCAFG00020002224) #29 MID1 (ENSCAFG00020002249) #30 HCCS (ENSCAFG00020002285) #31 ARHGAP6 (ENSCAFG00020002309) #32 AMELX (ENSCAFG00020002340) #33 ENSCAFG00020002352 MSL3 (ENSCAFG00020002360) #34 ENSCAFG00020002578 FRMPD4 (ENSCAFG00020002590) #35 Red fox MODERN SPECIES 110 ENSVVUG00000018851 ENSVVUG00000018856 ENSVVUG00000018859 NLGN4X (ENSVVUG00000018878) #8 PUDP (ENSVVUG00000018890) #12 STS (ENSVVUG00000018896) #13 PNPLA4 (ENSVVUG00000018924) #15 ANOS1 (ENSVVUG00000018957) #18 TBL1X (ENSVVUG00000019012) #22 GPR143 (ENSVVUG00000019023) #23 SHROOM2 (ENSVVUG00000019028) #25 ENSVVUG00000019031 WWC3 (ENSVVUG00000019038) #27 CLCN4 (ENSVVUG00000019049) #29 MID1 (ENSVVUG00000019057) #30 HCCS (ENSVVUG00000019075) #31 ARHGAP6 (ENSVVUG00000019086) #32 AMELX (ENSVVUG00000019126) #33 MSL3 (ENSVVUG00000019141) #34 FRMPD4 (ENSVVUG00000019150) #35 ENSVVUG00000019156 PRPS2 (ENSVVUG00000019172) #36 TLR7 (ENSVVUG00000019267) TLR8 (ENSVVUG00000019271) Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00520000056155 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Mustelinae ANCESTRAL SPECIES 131 ENSGT00510000049811 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 Ferret MODERN SPECIES 295 ARSL (ENSMPUG00000001161) ARSH (ENSMPUG00000001111) ARSF (ENSMPUG00000001108) MXRA5 (ENSMPUG00000001107) ENSMPUG00000001106 PRKX (ENSMPUG00000001102) ENSMPUG00000001099 ENSMPUG00000001096 ENSMPUG00000001093 #8 ENSMPUG00000001092 ENSMPUG00000019242 PUDP (ENSMPUG00000001087) #12 STS (ENSMPUG00000001082) #13 PNPLA4 (ENSMPUG00000001071) #15 ANOS1 (ENSMPUG00000001066) #18 ENSMPUG00000001063 #22 ENSMPUG00000019238 American mink MODERN SPECIES 126 XG (ENSNVIG00000015061) GYG2 (ENSNVIG00000015015) ARSD (ENSNVIG00000014995) ARSL (ENSNVIG00000014948) ARSH (ENSNVIG00000014924) ARSF (ENSNVIG00000014862) MXRA5 (ENSNVIG00000014851) PRKX (ENSNVIG00000014829) ENSNVIG00000014795 ENSNVIG00000014706 #8 PUDP (ENSNVIG00000014676) #12 STS (ENSNVIG00000014668) #13 PLPL4 (ENSNVIG00000014625) #15 ANOS1 (ENSNVIG00000014559) #18 ENSNVIG00000014548 ENSNVIG00000014426 #22 Ursidae ANCESTRAL SPECIES 28 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722.m #23 ENSGT00940000155212 #25 ENSGT00520000056155 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821.k.a #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.m #33 ENSGT00950000182965.b #34 ENSGT00940000154837.f.f ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b.d.b #36 ENSGT00940000159771 Ursus ANCESTRAL SPECIES 163 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722.m #23 ENSGT00940000155212 #25 ENSGT00520000056155 American black bear MODERN SPECIES 4246 ENSUAMG00000026293 #22 ENSUAMG00000026292 #23 Polar bear MODERN SPECIES 187 ENSUMAG00000019080 ENSUMAG00000019090 GYG2 (ENSUMAG00000019102) ARSD (ENSUMAG00000019106) ARSL (ENSUMAG00000019108) ARSH (ENSUMAG00000019112) ARSF (ENSUMAG00000019117) MXRA5 (ENSUMAG00000019122) PRKX (ENSUMAG00000019125) ENSUMAG00000019132 ENSUMAG00000019138 #8 PUDP (ENSUMAG00000019151) #12 STS (ENSUMAG00000019158) #13 PNPLA4 (ENSUMAG00000019166) #15 ANOS1 (ENSUMAG00000019171) #18 ENSUMAG00000019228 #22 GPR143 (ENSUMAG00000019414) #23 ENSUMAG00000019515 #25 ENSUMAG00000019518 ENSUMAG00000019520 Giant Panda MODERN SPECIES 2288 GYG2 (ENSAMEG00000005507) ARSD (ENSAMEG00000005477) ARSH (ENSAMEG00000005400) ARSF (ENSAMEG00000005388) MXRA5 (ENSAMEG00000005372) PRKX (ENSAMEG00000005348) ENSAMEG00000027159 #8 ENSAMEG00000001506 #12 STS (ENSAMEG00000001445) #13 PNPLA4 (ENSAMEG00000012515) #15 ENSAMEG00000006830 #18 ENSAMEG00000030203 ENSAMEG00000030660 ENSAMEG00000014903 ENSAMEG00000010492 ENSAMEG00000015133 #22 ENSAMEG00000009277 #23 SHROOM2 (ENSAMEG00000004939) #25 WWC3 (ENSAMEG00000010338) #27 CLCN4 (ENSAMEG00000010265) #29 ENSAMEG00000010220 #30 HCCS (ENSAMEG00000010198) #31 ENSAMEG00000010177 #32 AMELX (ENSAMEG00000010171) #33 MSL3 (ENSAMEG00000010145) #34 FRMPD4 (ENSAMEG00000010130) #35 ENSAMEG00000019784 PRPS2 (ENSAMEG00000010106) #36 TLR7 (ENSAMEG00000019777) TLR8 (ENSAMEG00000019770) ENSAMEG00000010093 Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.b ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Suina ANCESTRAL SPECIES 41 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.b ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT01040000241139 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Pig DUPLICATION Pig MODERN SPECIES 300 ENSSSCG00000025086 ENSSSCG00000046611 PRKX (ENSSSCG00000038963) ENSSSCG00000012093 ENSSSCG00000012094 ENSSSCG00000038458 OBP (ENSSSCG00000012095) ENSSSCG00000054257 ENSSSCG00000035655 ENSSSCG00000033643 #8 ENSSSCG00000023172 #12 ENSSSCG00000026520 #13 ENSSSCG00000061573 ENSSSCG00000012100 #15 ENSSSCG00000012101 #18 ENSSSCG00000012102 #22 ENSSSCG00000012103 #23 SHROOM2 (ENSSSCG00000012104) #25 ENSSSCG00000042673 #26 ENSSSCG00000051860 #26 ENSSSCG00000050596 #26 WWC3 (ENSSSCG00000012108) #27 CLCN4 (ENSSSCG00000024809) #29 MID1 (ENSSSCG00000012110) #30 HCCS (ENSSSCG00000012111) #31 ENSSSCG00000012112 #32 AMELY (ENSSSCG00000012113) MSL3 (ENSSSCG00000012114) #34 FRMPD4 (ENSSSCG00000030877) #35 ENSSSCG00000041542 PRPS2 (ENSSSCG00000057105) #36 Pig MODERN SPECIES 301 ENSSSCG00000061068 ENSSSCG00000057353 ENSSSCG00000036077 ENSSSCG00000031410 ENSSSCG00000038567 ENSSSCG00000032439 #8 ENSSSCG00000035838 #12 ENSSSCG00000036122 #13 ENSSSCG00000038027 #15 ENSSSCG00000038192 #18 ENSSSCG00000038226 #22 ENSSSCG00000036341 #23 ENSSSCG00000034469 ENSSSCG00000032135 ENSSSCG00000039144 ENSSSCG00000012833 ENSSSCG00000055885 ENSSSCG00000043796 ENSSSCG00000031398 ENSSSCG00000033858 ENSSSCG00000056055 ENSSSCG00000047835 ENSSSCG00000056936 ENSSSCG00000040592 ENSSSCG00000025253 ENSSSCG00000026430 Chacoan peccary MODERN SPECIES 925 GYG2 (ENSCWAG00000006184) ARSD (ENSCWAG00000006137) ARSL (ENSCWAG00000006085) ARSF (ENSCWAG00000005528) MXRA5 (ENSCWAG00000005483) PRKX (ENSCWAG00000005455) ENSCWAG00000005296 ENSCWAG00000005242 ENSCWAG00000005223 ENSCWAG00000005129 #8 PUDP (ENSCWAG00000005066) #12 STS (ENSCWAG00000004943) #13 PNPLA4 (ENSCWAG00000004893) #15 ANOS1 (ENSCWAG00000004810) #18 ENSCWAG00000004797 ENSCWAG00000004754 #22 GPR143 (ENSCWAG00000004631) #23 ENSCWAG00000004537 #25 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b ENSGT01030000235420 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Camelidae ANCESTRAL SPECIES 59 ENSGT00940000161561 ENSGT00940000164022 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Alpaca MODERN SPECIES 3262 ENSVPAG00000011623 #22 Arabian camel MODERN SPECIES 204 XG (ENSCDRG00005017911) GYG2 (ENSCDRG00005018612) ARSD (ENSCDRG00005018666) ARSL (ENSCDRG00005018696) ARSF (ENSCDRG00005018790) MXRA5 (ENSCDRG00005018835) ENSCDRG00005018989 ENSCDRG00005019016 ENSCDRG00005019038 ENSCDRG00005019077 ENSCDRG00005019099 #8 PUDP (ENSCDRG00005019149) #12 STS (ENSCDRG00005019178) #13 PNPLA4 (ENSCDRG00005019233) #15 ANOS1 (ENSCDRG00005019314) #18 ENSCDRG00005019358 #22 GPR143 (ENSCDRG00005019461) #23 ENSCDRG00005019562 #25 ENSCDRG00005019574 WWC3 (ENSCDRG00005019584) #27 CLCN4 (ENSCDRG00005019632) #29 MID1 (ENSCDRG00005019668) #30 HCCS (ENSCDRG00005019692) #31 ARHGAP6 (ENSCDRG00005008483) #32 AMELX (ENSCDRG00005008628) #33 ENSCDRG00005008775 #34 FRMPD4 (ENSCDRG00005009509) #35 PRPS2 (ENSCDRG00005010248) #36 TLR7 (ENSCDRG00005010320) TLR8 (ENSCDRG00005010375) TMSB4X (ENSCDRG00005010405) Artiodactyla_b ANCESTRAL SPECIES 24 ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b ENSGT01030000235420 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Cetacea ANCESTRAL SPECIES 21 ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.`b.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00930000150973.A ENSGT00940000162067 Odontoceti ANCESTRAL SPECIES 22 ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.`b.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b ENSGT00930000150973.A Odontoceti_a ANCESTRAL SPECIES 20 ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.`b.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b.n ENSGT00940000162067 Odontoceti_b ANCESTRAL SPECIES 22 ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00950000183120.e.b.a.b ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00410000025556.a.b #27 ENSGT00940000154399.a.b ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00940000155104.q.b ENSGT00510000047363 ENSGT00390000009151 #33 ENSGT00950000182965.b.`b.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 Monodontidae ANCESTRAL SPECIES 32 ENSGT00940000162413 ENSGT01050000244840.B ENSGT00440000039314.a ENSGT00940000161561 ENSGT00940000164022 ENSGT00940000154344.b ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00940000154399.a.b ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b.`b.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.b.n Beluga whale MODERN SPECIES 64 ENSDLEG00000008157 PUDP (ENSDLEG00000008104) #12 ENSDLEG00000008093 STS (ENSDLEG00000008060) #13 PNPLA4 (ENSDLEG00000008037) #15 ANOS1 (ENSDLEG00000007965) #18 TBL1X (ENSDLEG00000020062) #22 GPR143 (ENSDLEG00000020055) #23 SHROOM2 (ENSDLEG00000020046) #25 ENSDLEG00000020041 WWC3 (ENSDLEG00000020031) #27 CLCN4 (ENSDLEG00000020016) #29 MID1 (ENSDLEG00000020008) #30 ENSDLEG00000020004 HCCS (ENSDLEG00000020001) #31 AMELX (ENSDLEG00000019998) #33 ARHGAP6 (ENSDLEG00000019991) #32 MSL3 (ENSDLEG00000019928) #34 ENSDLEG00000019916 FRMPD4 (ENSDLEG00000019903) #35 PRPS2 (ENSDLEG00000019898) #36 TLR7 (ENSDLEG00000019895) Narwhal MODERN SPECIES 309 P2RY8 (ENSMMNG00015018374) AKAP17A (ENSMMNG00015018359) ENSMMNG00015018337 ENSMMNG00015018322 GYG2 (ENSMMNG00015018281) ARSD (ENSMMNG00015018253) MXRA5 (ENSMMNG00015018222) PRKX (ENSMMNG00015018186) ENSMMNG00015018095 #8 ENSMMNG00015018046 PUDP (ENSMMNG00015018020) #12 ENSMMNG00015017986 STS (ENSMMNG00015017938) #13 PNPLA4 (ENSMMNG00015017900) #15 ANOS1 (ENSMMNG00015017865) #18 ENSMMNG00015017813 #22 GPR143 (ENSMMNG00015017757) #23 SHROOM2 (ENSMMNG00015017718) #25 ENSMMNG00015017695 WWC3 (ENSMMNG00015017376) #27 ENSMMNG00015017266 #27 ZFY (ENSMMNG00015017205) ENSMMNG00015016990 ENSMMNG00015016933 MID1 (ENSMMNG00015016886) #30 ENSMMNG00015016859 HCCS (ENSMMNG00015016825) #31 ARHGAP6 (ENSMMNG00015016475) #32 AMELX (ENSMMNG00015016277) #33 ENSMMNG00015016247 ENSMMNG00015016140 #34 Vaquita MODERN SPECIES 34 ENSPSNG00000020493 ENSPSNG00000020517 ZBED1 (ENSPSNG00000020538) CD99 (ENSPSNG00000020555) GYG2 (ENSPSNG00000020587) ARSD (ENSPSNG00000020644) MXRA5 (ENSPSNG00000020746) PRKX (ENSPSNG00000020797) ENSPSNG00000020881 #8 ENSPSNG00000020969 PUDP (ENSPSNG00000020989) #12 STS (ENSPSNG00000021279) #13 ENSPSNG00000021948 PNPLA4 (ENSPSNG00000021966) #15 ANOS1 (ENSPSNG00000022014) #18 ENSPSNG00000022058 #22 GPR143 (ENSPSNG00000022086) #23 SHROOM2 (ENSPSNG00000022106) #25 WWC3 (ENSPSNG00000022116) #27 ENSPSNG00000022138 CLCN4 (ENSPSNG00000022149) #29 MID1 (ENSPSNG00000022169) #30 ENSPSNG00000022180 HCCS (ENSPSNG00000013406) #31 ARHGAP6 (ENSPSNG00000013460) #32 ENSPSNG00000013654 AMELX (ENSPSNG00000013715) #33 ENSPSNG00000013820 #34 FRMPD4 (ENSPSNG00000014495) #35 PRPS2 (ENSPSNG00000015830) #36 TLR7 (ENSPSNG00000015939) Dolphin MODERN SPECIES 3148 ENSTTRG00000008100 #22 ENSTTRG00000008117 #23 SHROOM2 (ENSTTRG00000008127) #25 Sperm whale MODERN SPECIES 18 DHRSX (ENSPCTG00005010815) ENSPCTG00005010864 GYG2 (ENSPCTG00005011030) ARSE (ENSPCTG00005011100) MXRA5 (ENSPCTG00005011141) PRKX (ENSPCTG00005011175) ENSPCTG00005011202 ENSPCTG00005011220 NLGN4X (ENSPCTG00005011273) #8 PUDP (ENSPCTG00005011380) #12 STS (ENSPCTG00005011451) #13 PNPLA4 (ENSPCTG00005011770) #15 ENSPCTG00005011870 ENSPCTG00005011889 ANOS1 (ENSPCTG00005011938) #18 ENSPCTG00005012092 #22 GPR143 (ENSPCTG00005012134) #23 ENSPCTG00005012240 #25 WWC3 (ENSPCTG00005012279) #27 ENSPCTG00005012322 CLCN4 (ENSPCTG00005012367) #29 MID1 (ENSPCTG00005012468) #30 HCCS (ENSPCTG00005012555) #31 ARHGAP6 (ENSPCTG00005012633) #32 ENSPCTG00005012761 AMELX (ENSPCTG00005012836) #33 MSL3 (ENSPCTG00005012875) #34 FRMPD4 (ENSPCTG00005013977) #35 PRPS2 (ENSPCTG00005014927) #36 TLR7 (ENSPCTG00005014996) TLR8 (ENSPCTG00005015071) Blue whale MODERN SPECIES 40 ENSBMSG00010015160 ENSBMSG00010015244 CD99 (ENSBMSG00010015288) XG (ENSBMSG00010015381) GYG2 (ENSBMSG00010015532) ARSD (ENSBMSG00010015576) MXRA5 (ENSBMSG00010015613) ENSBMSG00010015653 PRKX (ENSBMSG00010015692) ENSBMSG00010015744 ENSBMSG00010015782 #8 PUDP (ENSBMSG00010015920) #12 STS (ENSBMSG00010015954) #13 PNPLA4 (ENSBMSG00010016004) #15 ANOS1 (ENSBMSG00010016061) #18 ENSBMSG00010016105 #22 GPR143 (ENSBMSG00010016163) #23 SHROOM2 (ENSBMSG00010016228) #25 ENSBMSG00010016272 WWC3 (ENSBMSG00010016304) #27 ENSBMSG00010016359 ENSBMSG00010016400 #29 MID1 (ENSBMSG00010016488) #30 HCCS (ENSBMSG00010016531) #31 ARHGAP6 (ENSBMSG00010016550) #32 ENSBMSG00010016602 #33 ENSBMSG00010016698 #34 FRMPD4 (ENSBMSG00010017108) #35 PRPS2 (ENSBMSG00010018978) #36 TLR7 (ENSBMSG00010019001) TLR8 (ENSBMSG00010019022) Pecora ANCESTRAL SPECIES 34 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT00940000170830 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01030000235420 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 ENSCHYG00000009523 ENSCHYG00000009399 ENSCHYG00000009306 ENSCHYG00000009205 ENSCHYG00000009108 ENSCHYG00000009073 ENSCHYG00000008821 ENSCHYG00000026359 ENSCHYG00000026346 ENSCHYG00000026317 #8 PUDP (ENSCHYG00000026267) #12 STS (ENSCHYG00000026228) #13 PNPLA4 (ENSCHYG00000026179) #15 ANOS1 (ENSCHYG00000026105) #18 ENSCHYG00000026081 #22 ENSCHYG00000026062 #22 ENSCHYG00000026051 USP9Y (ENSCHYG00000026024) ENSCHYG00000026010 UTY (ENSCHYG00000025844) ENSCHYG00000025789 ENSCHYG00000025773 ENSCHYG00000025769 #26 ENSCHYG00000025751 #25 ENSCHYG00000025723 #25 WWC3 (ENSCHYG00000025613) #27 CLCN4 (ENSCHYG00000025569) #29 MID1 (ENSCHYG00000025497) #30 ENSCHYG00000025477 #31 ARHGAP6 (ENSCHYG00000025448) #32 AMELY (ENSCHYG00000025353) Yarkand deer MODERN SPECIES 1323 ENSCHYG00000009561 ENSCHYG00000009523 ENSCHYG00000009399 ENSCHYG00000009306 ENSCHYG00000009205 ENSCHYG00000009108 ENSCHYG00000009073 ENSCHYG00000008821 ENSCHYG00000026359 ENSCHYG00000026346 ENSCHYG00000026317 #8 PUDP (ENSCHYG00000026267) #12 STS (ENSCHYG00000026228) #13 PNPLA4 (ENSCHYG00000026179) #15 ANOS1 (ENSCHYG00000026105) #18 ENSCHYG00000026081 #22 ENSCHYG00000026062 #22 ENSCHYG00000026051 USP9Y (ENSCHYG00000026024) ENSCHYG00000026010 UTY (ENSCHYG00000025844) ENSCHYG00000025789 ENSCHYG00000025773 ENSCHYG00000025769 #26 ENSCHYG00000025751 #25 ENSCHYG00000025723 #25 WWC3 (ENSCHYG00000025613) #27 CLCN4 (ENSCHYG00000025569) #29 MID1 (ENSCHYG00000025497) #30 ENSCHYG00000025477 #31 ARHGAP6 (ENSCHYG00000025448) #32 Percora_a ANCESTRAL SPECIES 22 ENSGT00940000162925 ENSGT00940000159942.a ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01030000235420 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.i #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00940000154433.a.a Bovidae ANCESTRAL SPECIES 23 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01030000235420.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00940000163405.h ENSGT00390000005717 #26 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.i #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Caprinae ANCESTRAL SPECIES 59 ENSGT00940000159095.c.b ENSGT00940000154433.a.a ENSGT00940000160879 ENSGT00940000159771 ENSGT00950000182803.B.d.b #36 ENSGT00950000183035.a.b.a #35 ENSGT00950000182965.b #34 ENSGT00390000009151.i #33 ENSGT00940000153904.a #32 ENSGT00390000004175 #31 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 Goat MODERN SPECIES 29 ENSCHIG00000015718 RAB9A (ENSCHIG00000001895) TCEANC (ENSCHIG00000016263) EGFL6 (ENSCHIG00000000498) ARHGEF9 (ENSCHIG00000016067) SPIN4 (ENSCHIG00000005442) ENSCHIG00000007849 ENSCHIG00000006806 FRMPD4 (ENSCHIG00000015208) #35 MSL3 (ENSCHIG00000008619) #34 ARHGAP6 (ENSCHIG00000022831) #32 ENSCHIG00000017454 #33 HCCS (ENSCHIG00000021236) #31 ENSCHIG00000006968 MID1 (ENSCHIG00000012678) #30 ENSCHIG00000008291 #22 GPR143 (ENSCHIG00000016990) #23 SHROOM2 (ENSCHIG00000020188) #25 ANOS1 (ENSCHIG00000022772) #18 PNPLA4 (ENSCHIG00000013510) #15 STS (ENSCHIG00000017504) #13 PUDP (ENSCHIG00000022092) #12 ENSCHIG00000007638 #8 ENSCHIG00000018257 ENSCHIG00000022295 ENSCHIG00000014346 ENSCHIG00000024935 ENSCHIG00000016088 ENSCHIG00000024604 ENSCHIG00000015463 ENSCHIG00000024801 Rambouillet Sheep MODERN SPECIES 205 ENSOARG00020024285 #34 AMELX (ENSOARG00020024156) #33 ARHGAP6 (ENSOARG00020024127) #32 HCCS (ENSOARG00020024113) #31 PRDM9 (ENSOARG00020023893) ENSOARG00020023859 #26 ENSOARG00020023846 #26 WWC3 (ENSOARG00020023612) #27 CLCN4 (ENSOARG00020023510) #29 MID1 (ENSOARG00020023438) #30 ENSOARG00020023199 ENSOARG00020023171 ENSOARG00020023143 ENSOARG00020023132 ENSOARG00020023111 ENSOARG00020023008 #22 ANOS1 (ENSOARG00020022822) #18 PNPLA4 (ENSOARG00020022744) #15 ENSOARG00020022730 STS (ENSOARG00020022693) #13 PUDP (ENSOARG00020022646) #12 ENSOARG00020022535 #8 ENSOARG00020022408 ENSOARG00020022367 ENSOARG00020022337 ENSOARG00020022326 ENSOARG00020022266 ENSOARG00020022239 ENSOARG00020022180 ENSOARG00020022131 ENSOARG00020022057 Bovinae ANCESTRAL SPECIES 32 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01030000235420.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00960000190178 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.i #33 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.a.j ##36 ENSGT00940000159771 ENSGT00940000160879 ENSGT00930000150973.A ENSGT00940000162067 Bos ANCESTRAL SPECIES 32 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.b.d ENSGT01030000235420.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01030000235420.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00960000190178 ENSGT00980000198921.a.a ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000012178.g.b.b.a.b.b ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.i #33 ENSGT01000000214694.A.b ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.a.j ##36 Bos_b ANCESTRAL SPECIES 39 ENSGT00940000159832 ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.b.c.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.a ENSGT01050000244868.a.a.a.b.a.b.a.a.a.a.a.b.d ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.a.a ENSGT01030000235420.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00960000190178 ENSGT00980000198921.a.a ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000012178.g.b.b.a.b.b ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151.i #33 ENSGT01000000214694.A.b ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.a.j ##36 ENSGT00940000159771 Cow MODERN SPECIES 177 PRKX (ENSBTAG00000014367) ENSBTAG00000016989 ENSBTAG00000025951 ENSBTAG00000025952 ENSBTAG00000052075 ENSBTAG00000049442 ENSBTAG00000053270 ENSBTAG00000012491 BDA20 (ENSBTAG00000016820) MGC151921 (ENSBTAG00000046084) ENSBTAG00000027841 #8 PUDP (ENSBTAG00000000207) #12 STS (ENSBTAG00000020789) #13 PNPLA4 (ENSBTAG00000015849) #15 ANOS1 (ENSBTAG00000001049) #18 TBL1X (ENSBTAG00000018112) #22 GPR143 (ENSBTAG00000006472) #23 ENSBTAG00000051024 SHROOM2 (ENSBTAG00000000211) #25 ENSBTAG00000002158 ENSBTAG00000047068 ENSBTAG00000053828 CLDN34 (ENSBTAG00000046366) #26 ENSBTAG00000055193 ENSBTAG00000009932 ENSBTAG00000035122 ENSBTAG00000048594 WWC3 (ENSBTAG00000013824) #27 CLCN4 (ENSBTAG00000011121) #29 MID1 (ENSBTAG00000010152) #30 MSL3 (ENSBTAG00000009278) #34 Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005011658 ENSBIXG00005001147 ENSBIXG00005011615 ENSBIXG00005001130 ENSBIXG00005000452 ENSBIXG00005011496 ENSBIXG00005011472 ENSBIXG00005011448 ENSBIXG00005011425 ENSBIXG00005011409 ENSBIXG00005001083 #8 ENSBIXG00005011152 #12 STS (ENSBIXG00005011080) #13 PNPLA4 (ENSBIXG00005011002) #15 ANOS1 (ENSBIXG00005010908) #18 ENSBIXG00005010818 #22 GPR143 (ENSBIXG00005010743) #23 SHROOM2 (ENSBIXG00005000636) #25 ENSBIXG00005010661 ENSBIXG00005010650 ENSBIXG00005010631 ENSBIXG00005010460 WWC3 (ENSBIXG00005010425) #27 CLCN4 (ENSBIXG00005010373) #29 MID1 (ENSBIXG00005010309) #30 ENSBIXG00005010237 ENSBIXG00005010228 ARHGAP6 (ENSBIXG00005010176) #32 HCCS (ENSBIXG00005010146) #31 AMELX (ENSBIXG00005010091) #33 ENSBIXG00005010072 Bos_a ANCESTRAL SPECIES 120 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00960000190178 ENSGT00390000009151.j #33 ENSGT00390000001798.j ENSGT00940000155375.d ENSGT00950000183152.A.`b.b Wild yak MODERN SPECIES 1869 ENSBMUG00000006623 #22 GPR143 (ENSBMUG00000006636) #23 ENSBMUG00000006673 #25 ENSBMUG00000006677 Domestic yak MODERN SPECIES 70 ENSBGRG00000014666 #22 GPR143 (ENSBGRG00000014824) #23 ENSBGRG00000014878 ENSBGRG00000014925 #33 ENSBGRG00000015085 USP9Y (ENSBGRG00000015615) ENSBGRG00000016112 ENSBGRG00000016180 ENSBGRG00000016206 ENSBGRG00000016296 ENSBGRG00000016329 ENSBGRG00000016770 ANOS1 (ENSBGRG00000016848) #18 PNPLA4 (ENSBGRG00000017194) #15 STS (ENSBGRG00000017387) #13 ENSBGRG00000017714 #12 American bison MODERN SPECIES 3360 ENSBBBG00000017763 AGTR2 (ENSBBBG00000017747) PNPLA4 (ENSBBBG00000017745) #15 ANOS1 (ENSBBBG00000017715) #18 ENSBBBG00000017691 #22 GPR143 (ENSBBBG00000004346) #23 ENSBBBG00000008006 #25 ENSBBBG00000004335 ENSBBBG00000007432 ENSBBBG00000017461 #26 Siberian musk deer MODERN SPECIES 1136 PNPLA4 (ENSMMSG00000016282) #15 ANOS1 (ENSMMSG00000016198) #18 ENSMMSG00000016174 #22 GPR143 (ENSMMSG00000016124) #23 ENSMMSG00000016097 ENSMMSG00000016065 #25 ENSMMSG00000016049 #26 ENSMMSG00000016032 ENSMMSG00000016014 ENSMMSG00000013678 WWC3 (ENSMMSG00000013454) #27 CLCN4 (ENSMMSG00000013407) #29 MID1 (ENSMMSG00000013368) #30 HCCS (ENSMMSG00000013339) #31 ARHGAP6 (ENSMMSG00000013184) #32 AMELX (ENSMMSG00000013049) #33 ENSMMSG00000012690 #34 FRMPD4 (ENSMMSG00000012092) #35 Atlantogenata ANCESTRAL SPECIES 158 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 Xenarthra ANCESTRAL SPECIES 955 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00390000005717 #26 ENSGT00520000056155 Armadillo MODERN SPECIES 2307 ENSDNOG00000031686 ENSDNOG00000049390 ENSDNOG00000037938 ANOS1 (ENSDNOG00000006652) #18 ENSDNOG00000038716 ENSDNOG00000031121 #22 GPR143 (ENSDNOG00000031449) #23 ENSDNOG00000048923 #26 ENSDNOG00000040007 ENSDNOG00000030685 ENSDNOG00000033278 ENSDNOG00000045383 Afrotheria ANCESTRAL SPECIES 207 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 Tenrec MODERN SPECIES 521 ENSETEG00000016863 #22 Afrotheria_a ANCESTRAL SPECIES 207 ENSGT01050000244868.a.a.a.b.a.b.a.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.a ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 Elephant MODERN SPECIES 622 ENSLAFG00000031748 ENSLAFG00000031355 ENSLAFG00000031910 ENSLAFG00000001970 #8 ENSLAFG00000026463 #8 PUDP (ENSLAFG00000014004) #12 ENSLAFG00000015149 #13 PNPLA4 (ENSLAFG00000017239) #15 ANOS1 (ENSLAFG00000003901) #18 ENSLAFG00000021416 #22 GPR143 (ENSLAFG00000018120) #23 SHROOM2 (ENSLAFG00000023101) #25 ENSLAFG00000031009 ENSLAFG00000029108 Hyrax MODERN SPECIES 378 ENSPCAG00000002608 #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000163186 ENSGT00940000154344.b ENSGT00510000049811 ENSGT00940000161628 ENSGT00940000161140 ENSGT00940000163319 ENSGT00940000162925 ENSGT00940000163432 ENSGT00940000159942.a ENSGT00940000159832 ENSGT00940000156607.a.a #8 ENSGT00390000014753 #12 ENSGT00940000161153 #13 ENSGT00940000162022 #15 ENSGT00440000033720.a #18 ENSGT00940000153421.a.a.a.a.b #22 ENSGT00390000016722 #23 ENSGT00940000155212 #25 ENSGT00390000005717 #26 ENSGT00520000056155 ENSGT00410000025556.a.b #27 ENSGT00940000158265 #29 ENSGT00940000155821 #30 ENSGT00390000004175 #31 ENSGT00940000153904.a #32 ENSGT00390000009151 #33 ENSGT00950000182965.b #34 ENSGT00950000183035.a.b.a #35 ENSGT00950000182803.B.d.b #36 ENSGT00940000159771 ENSGT00940000160879 Opossum MODERN SPECIES 6 ENSMODG00000047753 ENSMODG00000017524 ENSMODG00000017519 #8 ENSMODG00000046016 ENSMODG00000048866 ENSMODG00000025344 PUDP (ENSMODG00000017505) #12 ENSMODG00000036654 ENSMODG00000017503 #13 ENSMODG00000014405 PNPLA4 (ENSMODG00000017500) #15 ENSMODG00000025348 ENSMODG00000042493 ENSMODG00000047950 ANOS1 (ENSMODG00000017475) #18 ENSMODG00000051600 #22 GPR143 (ENSMODG00000017452) #23 SHROOM2 (ENSMODG00000017449) #25 ENSMODG00000025349 #26 ENSMODG00000017446 WWC3 (ENSMODG00000017437) #27 CLCN4 (ENSMODG00000017425) #29 MID1 (ENSMODG00000017399) #30 ENSMODG00000017377 HCCS (ENSMODG00000043457) #31 AMELX (ENSMODG00000017370) #33 ARHGAP6 (ENSMODG00000017371) #32 MSL3 (ENSMODG00000017350) #34 FRMPD4 (ENSMODG00000017342) #35 ENSMODG00000028154 ENSMODG00000017334 #36