Neopterygii	ANCESTRAL SPECIES	97	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000160495.a	ENSGT00390000016421.b.a #18	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065	ENSGT00390000015060 #19	ENSGT00940000161679 #20	ENSGT00940000154497.B #21	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b #22	ENSGT00390000012496.a #23	ENSGT00940000164480 #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000175622	ENSGT00390000003706.a.a	ENSGT00940000165064	ENSGT00390000008694.b.b	ENSGT00940000159105	ENSGT01030000234527.A.a.b.a.a	ENSGT00390000013415.a.b	ENSGT00950000182864.a.b.b.a.a	ENSGT00940000154909.a	ENSGT00940000154909.b	ENSGT00940000166792
Osteoglossocephalai	ANCESTRAL SPECIES	53	ENSGT00730000110915.b #14	ENSGT00900000141090 #15	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000013817	ENSGT00940000158283	ENSGT00940000161679.b ##20	ENSGT00390000019377.b #22	ENSGT00390000012496.a #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000175622	ENSGT00390000003706.a.a	ENSGT00940000161651 #30	ENSGT00940000162722 #31	ENSGT00390000011275 #32	ENSGT00910000144271.C #33	ENSGT00390000007467 #34	ENSGT00390000016696 #35	ENSGT00950000182906.b.b #36	ENSGT01090000259985.b.b.a.a	ENSGT01090000259985.b.b.a.b
Clupeocephala	ANCESTRAL SPECIES	23	ENSGT00940000156556.h #7	ENSGT00940000157784.c.d #8	ENSGT01050000244864.D #9	ENSGT01050000244864.C.f #10	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00900000141090 #15	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000164246.C.d.a #27	ENSGT00940000155116.a #28	ENSGT00940000166972 #29	ENSGT00940000161651 #30	ENSGT00940000162722 #31	ENSGT00390000011275 #32	ENSGT00910000144271.C #33	ENSGT00390000007467 #34	ENSGT00390000016696 #35	ENSGT00950000182906.b.b #36	ENSGT00940000158318 #37
Otomorpha	ANCESTRAL SPECIES	232						ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00900000141090 #15	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000164246.C.d.a #27	ENSGT00940000155116.a #28	ENSGT00940000166972 #29	ENSGT00940000161651 #30	ENSGT00940000162722 #31	ENSGT00390000011275 #32	ENSGT00910000144271.C #33	ENSGT00390000007467 #34	ENSGT00390000016696 #35	ENSGT00950000182906.b.b #36	ENSGT00940000158318 #37
Clupeiformes	ANCESTRAL SPECIES	406													ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00940000159870.l	ENSGT00940000154497.A ##21	ENSGT00940000154065.b	ENSGT01050000244827.B	ENSGT00940000154840.b.e.b
Denticle herring	MODERN SPECIES	19	ENSDCDG00000018369	ENSDCDG00000018396	CTDSP1 (ENSDCDG00000019298)	SPEGNB (ENSDCDG00000019303)	ENSDCDG00000019304	ENSDCDG00000019308	ENSDCDG00000019337	uchl3 (ENSDCDG00000019339)	lmo7a (ENSDCDG00000019367)	kctd12.1 (ENSDCDG00000019580)	acod1 (ENSDCDG00000019585)	zgc:162944 (ENSDCDG00000019599)	atp5po (ENSDCDG00000019601) #19	SLC5A3 (ENSDCDG00000019602) #20	KCNE2 (ENSDCDG00000019604) #21	casq2 (ENSDCDG00000019610) #22	vangl1 (ENSDCDG00000019702) #23	nhlh2 (ENSDCDG00000019707) #24	CNGA4 (ENSDCDG00000019712) #25	rcan1a (ENSDCDG00000019717)	ENSDCDG00000019718 ##21	dnajc28 (ENSDCDG00000019719)	mab21l3 (ENSDCDG00000019722)	atp1a1b (ENSDCDG00000019818)	ENSDCDG00000024807	ENSDCDG00000024809	ENSDCDG00000024836	ENSDCDG00000025608	ENSDCDG00000025614	ENSDCDG00000025620	ENSDCDG00000025624
Atlantic herring	MODERN SPECIES	11	nr1i2 (ENSCHAG00000024533)	gsk3ba (ENSCHAG00000024359)	GPR156 (ENSCHAG00000024335)	LRRC58 (ENSCHAG00000024333) ##7	ENSCHAG00000024330	fstl1b (ENSCHAG00000024177) ##8	ENSCHAG00000024172	ENSCHAG00000024168	ENSCHAG00000024163	ENSCHAG00000024158	ENSCHAG00000024153	ENSCHAG00000024152	ENSCHAG00000024149	atp5po (ENSCHAG00000024141) #19	KCNE2 (ENSCHAG00000024059) #21	casq2 (ENSCHAG00000024013) #22	vangl1 (ENSCHAG00000023988) #23	nhlh2 (ENSCHAG00000023984) #24	AQP8 (ENSCHAG00000023832)	CNGA4 (ENSCHAG00000023820) #25	rcan1a (ENSCHAG00000023817)	ENSCHAG00000023812 ##21	dnajc28 (ENSCHAG00000023810)	mab21l3 (ENSCHAG00000023802)	ENSCHAG00000020871	ENSCHAG00000020765	ENSCHAG00000020732	ENSCHAG00000020744	ENSCHAG00000020721	ENSCHAG00000020700	clasp1a (ENSCHAG00000018184)
Otophysi	ANCESTRAL SPECIES	130						ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000164246.C.d.a #27	ENSGT00940000155116.a #28	ENSGT00940000166972 #29	ENSGT00940000164201.d	ENSGT00940000161651 #30	ENSGT00940000162722 #31	ENSGT00390000011275 #32	ENSGT00910000144271.C.db.a #33	ENSGT00390000007467 #34	ENSGT00940000155792	ENSGT00390000008096.B.e.a
Characiphysae	ANCESTRAL SPECIES	76	ENSGT00940000158147	ENSGT00390000004660.C.b	ENSGT00390000006574	ENSGT01090000260076.b.b.b	ENSGT00940000164374.B.c.a.d	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000164246.C.d.a #27	ENSGT00940000155116.a #28	ENSGT00940000166972.r #29
Channel catfish	MODERN SPECIES	25	ENSIPUG00000011698	gja8a (ENSIPUG00000011772) #9	gja5a (ENSIPUG00000011789) #12	acp6 (ENSIPUG00000011801) #13	ENSIPUG00000011832	ENSIPUG00000011846	chaf1b (ENSIPUG00000011852) #16	ENSIPUG00000011877 #17	ENSIPUG00000011889 #17	DOP1B (ENSIPUG00000011932) #18	ENSIPUG00000011975 #18	drc1 (ENSIPUG00000011986)	atp5o (ENSIPUG00000012023) #19	slc5a3 (ENSIPUG00000012070) #20	KCNE2 (ENSIPUG00000012078) #21	casq2 (ENSIPUG00000012090) #22	vangl1 (ENSIPUG00000012127) #23	nhlh2 (ENSIPUG00000012150) #24	cnga4 (ENSIPUG00000012151) #25	fhip1b (ENSIPUG00000012196) #26	ENSIPUG00000012279 #27	ENSIPUG00000012286 #28	hpxa (ENSIPUG00000012314) #29	mxe (ENSIPUG00000012438)	gatd3 (ENSIPUG00000012484)	olig2 (ENSIPUG00000012497) #30	olig1 (ENSIPUG00000012506) #31	ercc1 (ENSIPUG00000012529) #32	ENSIPUG00000012574 #33	ENSIPUG00000012599 #33	ENSIPUG00000012627
Characiphysae_b	ANCESTRAL SPECIES	82	ENSGT00940000158147	ENSGT00390000004660.C.b	ENSGT00390000006574	ENSGT01090000260076.b.b.b	ENSGT00940000164374.B.c.a.d	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00980000198655	ENSGT00980000198666	ENSGT00940000155116.a #28	ENSGT00940000166972.r #29	ENSGT00940000155686
Electric eel	MODERN SPECIES	22	ENSEEEG00000022286	med14 (ENSEEEG00000022365)	usp9 (ENSEEEG00000022580)	rpl8 (ENSEEEG00000023665)	gja5a (ENSEEEG00000023669) #12	acp6 (ENSEEEG00000023673) #13	ENSEEEG00000023674	ENSEEEG00000023676	ENSEEEG00000023678	chaf1b (ENSEEEG00000023681) #16	ENSEEEG00000023683 #17	ENSEEEG00000023684 #17	atp5po (ENSEEEG00000023686) #19	SLC5A3 (ENSEEEG00000023687) #20	KCNE2 (ENSEEEG00000023689) #21	casq2 (ENSEEEG00000023698) #22	vangl1 (ENSEEEG00000023718) #23	nhlh2 (ENSEEEG00000023719) #24	CNGA4 (ENSEEEG00000023724) #25	fhip1b (ENSEEEG00000023727) #26	ENSEEEG00000023730	ENSEEEG00000023733 #28	ENSEEEG00000023737 #28	hpxa (ENSEEEG00000023740) #29
Characoidei	ANCESTRAL SPECIES	151	ENSGT00940000158147	ENSGT00390000004660.C.b	ENSGT00390000006574	ENSGT01090000260076.b.b.b	ENSGT00940000164374.B.c.a.d	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00980000198666	ENSGT00940000155116.a #28	ENSGT00940000166972.r #29	ENSGT00940000155686
Red-bellied piranha	MODERN SPECIES	121	il1rapl1a (ENSPNAG00000007939)	si:dkey-18p12.4 (ENSPNAG00000000540)	ENSPNAG00000007956	gja8a (ENSPNAG00000007960) #9	gja5a (ENSPNAG00000000556) #12	acp6 (ENSPNAG00000007971) #13	ENSPNAG00000007978	ENSPNAG00000007982	chaf1b (ENSPNAG00000007990) #16	morc3a (ENSPNAG00000008001) #17	DOP1B (ENSPNAG00000008044) #18	atp5po (ENSPNAG00000000628) #19	SLC5A3 (ENSPNAG00000008065) #20	SLC5A3 (ENSPNAG00000008070) #20	KCNE2 (ENSPNAG00000000643) #21	casq2 (ENSPNAG00000000653) #22	vangl1 (ENSPNAG00000000662) #23	nhlh2 (ENSPNAG00000008099) #24	CNGA4 (ENSPNAG00000000668) #25	fhip1b (ENSPNAG00000008122) #26	olig2 (ENSPNAG00000008137) #30	olig1 (ENSPNAG00000000704) #31	ercc1 (ENSPNAG00000007191) #32	ENSPNAG00000008149 #33	ENSPNAG00000008153 #33	ENSPNAG00000008156 #33	ENSPNAG00000000729 #33	rabl3 (ENSPNAG00000000748) #34	dnajb11 (ENSPNAG00000000766)	satb2 (ENSPNAG00000004753)	PLCL1 (ENSPNAG00000000792)
Mexicana tetra	MODERN SPECIES	107	tmem30c (ENSAMXG00000002056)	cmss1 (ENSAMXG00000002046)	il1rapl1a (ENSAMXG00000002061)	gja8a (ENSAMXG00000002069) #9	gja5a (ENSAMXG00000043677) #12	acp6 (ENSAMXG00000002077) #13	ENSAMXG00000038350	ENSAMXG00000031793	chaf1b (ENSAMXG00000002087) #16	ENSAMXG00000002096 #17	ENSAMXG00000038360 #17	DOP1B (ENSAMXG00000002101) #18	atp5po (ENSAMXG00000002104) #19	SLC5A3 (ENSAMXG00000026064) #20	KCNE2 (ENSAMXG00000026065) #21	casq2 (ENSAMXG00000002106) #22	vangl1 (ENSAMXG00000002110) #23	nhlh2 (ENSAMXG00000029850) #24	CNGA4 (ENSAMXG00000032575) #25	fhip1b (ENSAMXG00000002120) #26	ENSAMXG00000041528	ENSAMXG00000002128 #28	hpxa (ENSAMXG00000002129) #29	ENSAMXG00000042757	MX1 (ENSAMXG00000044008)
Cyprinoidei	ANCESTRAL SPECIES	104												ENSGT01040000241148	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000164246.C.d.a #27	ENSGT00940000155116.a #28	ENSGT00940000166972 #29	ENSGT00940000164201.d	ENSGT00940000161651 #30	ENSGT00940000162722 #31	ENSGT00390000011275 #32	ENSGT00910000144271.C.db.a.b #33	ENSGT00910000144271.C.db.a.a #33	ENSGT00390000007467 #34	ENSGT00940000155792
Cyprininae	ANCESTRAL SPECIES	263													ENSGT00390000016421.b.a.d #18	ENSGT00390000015060.fb #19	ENSGT00940000161679.a.c #20	ENSGT00390000019377.b.f.a #22	ENSGT00940000161814.g.a.d.c.b.a.a.a.a	ENSGT00940000162818.c.a.g.a.c	ENSGT00390000012496.a.d.d #23	ENSGT00940000164480.a.a.b #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a.c #26	ENSGT00940000164246.C.d.a.c #27	ENSGT00940000164201.d.a.b	ENSGT00390000003706.a.a.s.b	ENSGT00940000161651.c #30	ENSGT00940000162722.b #31	ENSGT00910000144271.C.db.a.a.b.b #33	ENSGT00390000007467.i #34	ENSGT00940000155792.f	ENSGT00390000008096.B.e.a.a
Goldfish	MODERN SPECIES	49	ENSCARG00000050884	ENSCARG00000050891	ENSCARG00000050902	caska (ENSCARG00000051129)	GPR82 (ENSCARG00000053544)	gpr34b (ENSCARG00000053550)	nyx (ENSCARG00000053575)	dcaf6 (ENSCARG00000053732)	dcaf6 (ENSCARG00000053805)	gpr161b (ENSCARG00000053821)	f5 (ENSCARG00000053911)	slc35a5 (ENSCARG00000055293)	DOP1B (ENSCARG00000055323) #18	atp5po (ENSCARG00000055386) #19	SLC5A3 (ENSCARG00000055473) #20	casq2 (ENSCARG00000055523) #22	ENSCARG00000056415	ENSCARG00000056426	vangl1 (ENSCARG00000056449) #23	nhlh2 (ENSCARG00000056473) #24	ENSCARG00000056484 #25	fhip1b (ENSCARG00000056532) #26	ENSCARG00000026376 #27	ENSCARG00000026381 #28	hpxa (ENSCARG00000026393) #29	gatd3 (ENSCARG00000026527)	olig2 (ENSCARG00000026546) #30	ENSCARG00000026553 #33	ENSCARG00000026559 #33	rabl3 (ENSCARG00000026571) #34	dnajb11 (ENSCARG00000026615)
Goldfish	MODERN SPECIES	49	man1a2 (ENSCARG00000014239)	ENSCARG00000014214	gdap2 (ENSCARG00000014163)	wdr3 (ENSCARG00000014094)	tbx15 (ENSCARG00000014064)	wars2 (ENSCARG00000014048)	klf12b (ENSCARG00000014034)	KLF5 (ENSCARG00000014027)	usp9 (ENSCARG00000013860)	ENSCARG00000013804	ENSCARG00000013803	ENSCARG00000013799	ENSCARG00000013794	atp5po (ENSCARG00000013775) #19	SLC5A3 (ENSCARG00000013773) #20	casq2 (ENSCARG00000012415) #22	ENSCARG00000012329	ENSCARG00000044544	ENSCARG00000044526	vangl1 (ENSCARG00000044505) #23	nhlh2 (ENSCARG00000044497) #24	ENSCARG00000044444 #25	fhip1b (ENSCARG00000044412) #26	ENSCARG00000044388	ENSCARG00000044375 #28	hpxa (ENSCARG00000044080) #29	gatd3 (ENSCARG00000044039)	olig2 (ENSCARG00000044031) #30	olig1 (ENSCARG00000044014) #31	ENSCARG00000043959 #33	ENSCARG00000043920 #33
Cyprininae_a	ANCESTRAL SPECIES	349													ENSGT00390000016421.b.a.d #18	ENSGT00390000015060.fb #19	ENSGT00940000161679.a.c #20	ENSGT00390000019377.b.f.a #22	ENSGT00940000161814.g.a.d.c.b.a.a.a.a	ENSGT00940000162818.c.a.g.a.c	ENSGT00390000012496.a.d.d #23	ENSGT00940000164480.a.a.b #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a.c #26	ENSGT00940000164246.C.d.a.c #27	ENSGT00940000155116.a.c #28	ENSGT00390000003706.a.a.s.b	ENSGT00940000161651.c #30	ENSGT00940000162722.b #31	ENSGT00910000144271.C.db.a.b.b #33	ENSGT00910000144271.C.db.a.a.b.b #33	ENSGT00390000007467.i #34	ENSGT00940000155792.f
Common carp reference	MODERN SPECIES	46	GPR82 (ENSCCRG00000078751)	gpr34b (ENSCCRG00000078366)	caska (ENSCCRG00000062836)	nyx (ENSCCRG00000014039)	ddx3xa (ENSCCRG00000065876)	rpl8 (ENSCCRG00000055439)	usp9 (ENSCCRG00000028441)	ENSCCRG00000081306	ENSCCRG00000013983	ENSCCRG00000068974	ENSCCRG00000011643	ENSCCRG00000078187	ENSCCRG00000040647 #18	atp5po (ENSCCRG00000002434) #19	ENSCCRG00000076861 #20	casq2 (ENSCCRG00000025811) #22	ENSCCRG00000082260	ENSCCRG00000005987	ENSCCRG00000023493	vangl1 (ENSCCRG00000082261) #23	nhlh2 (ENSCCRG00000062686) #24	ENSCCRG00000010691 #25	fhip1b (ENSCCRG00000010687) #26	ENSCCRG00000010686 #27	ENSCCRG00000053552 #28	gatd3 (ENSCCRG00000059500)	ENSCCRG00000061176 #30	olig1 (ENSCCRG00000070193) #31	ENSCCRG00000071698	ENSCCRG00000029032	ENSCCRG00000050423 #33
Golden-line barbel	MODERN SPECIES	27													DOP1B (ENSSGRG00000052402) #18	atp5po (ENSSGRG00000052397) #19	SLC5A3 (ENSSGRG00000052396) #20	casq2 (ENSSGRG00000052354) #22	ENSSGRG00000052353	ENSSGRG00000052352	ENSSGRG00000052351	vangl1 (ENSSGRG00000052350) #23	nhlh2 (ENSSGRG00000052349) #24	CNGA4 (ENSSGRG00000052348) #25	fhip1b (ENSSGRG00000052347) #26	ENSSGRG00000052346 #27	ENSSGRG00000052345 #28	ENSSGRG00000052323	gatd3 (ENSSGRG00000052319)	olig2 (ENSSGRG00000052318) #30	olig1 (ENSSGRG00000052317) #31	ercc1 (ENSSGRG00000052315) #32	ENSSGRG00000052308 #33
Cyprininae	ANCESTRAL SPECIES	16	ENSGT00530000063528.B.i.b	ENSGT00940000166292.c.a.a	ENSGT00940000166446.b	ENSGT00990000203619.A.a.c	ENSGT01060000248589.C.g.a.a	ENSGT00940000155600.b.d.b	ENSGT00940000160782.b	ENSGT00940000154443.h.a	ENSGT00940000153244.B	ENSGT00940000155375.o.b	ENSGT00940000161814.g.a.d.c.a	ENSGT01040000241148	ENSGT00390000016421.b.a.c #18	ENSGT00390000015060.gb #19	ENSGT00940000161679.a.d #20	ENSGT00390000019377.b.f.b #22	ENSGT00390000012496.a.d.c #23	ENSGT00940000164480.a.a.a #24	ENSGT00950000182936.a.a.a.d #26	ENSGT00940000164246.C.d.a.d #27	ENSGT00940000155116.a.d #28	ENSGT00940000166972.o #29	ENSGT00940000164201.d.a.a	ENSGT00390000003706.a.a.s.a	ENSGT00940000161651.d #30	ENSGT00940000162722.a #31	ENSGT00390000011275 #32	ENSGT00910000144271.C.db.a.b.b #33	ENSGT00910000144271.C.db.a.a.b.a #33	ENSGT00910000144271.C.db.a.b.a #33	ENSGT00910000144271.C.db.a.a.a #33
Goldfish	MODERN SPECIES	27	ENSCARG00000049200	fundc1 (ENSCARG00000069796)	ENSCARG00000069799	mao (ENSCARG00000069831)	caska (ENSCARG00000069874)	GPR82 (ENSCARG00000069952)	gpr34b (ENSCARG00000069956)	nyx (ENSCARG00000069959)	ddx3xa (ENSCARG00000070002)	rpl8 (ENSCARG00000070123)	usp9 (ENSCARG00000070127)	ENSCARG00000070138	ENSCARG00000070140	atp5po (ENSCARG00000070142) #19	SLC5A3 (ENSCARG00000070145) #20	casq2 (ENSCARG00000070147) #22	ENSCARG00000070157	vangl1 (ENSCARG00000070158) #23	nhlh2 (ENSCARG00000070160) #24	fhip1b (ENSCARG00000070162) #26	ENSCARG00000070165 #27	ENSCARG00000070166 #28	hpxa (ENSCARG00000070168) #29	ENSCARG00000070183	olig2 (ENSCARG00000070211) #30	olig1 (ENSCARG00000070213) #31	ENSCARG00000070214	ercc1 (ENSCARG00000070216) #32	ENSCARG00000070217 #33	gzm3.4 (ENSCARG00000070218) #33	ENSCARG00000070219 #33
Cyprininae_a	ANCESTRAL SPECIES	31	ENSGT00530000063528.B.i.b	ENSGT00940000166292.c.a.a	ENSGT00940000166446.b	ENSGT00990000203619.A.a.c	ENSGT01060000248589.C.g.a.a	ENSGT00940000155600.b.d.b	ENSGT00940000160782.b	ENSGT00940000154443.h.a	ENSGT00940000153244.B.g	ENSGT00940000155375.o.b	ENSGT00940000161814.g.a.d.c.a	ENSGT01040000241148	ENSGT00390000016421.b.a.c #18	ENSGT00390000015060.gb #19	ENSGT00940000161679.a.d #20	ENSGT00390000019377.b.f.b #22	ENSGT01100000263568.b.a.c.b.b.a.b.a	ENSGT00390000012496.a.d.c #23	ENSGT00940000164480.a.a.a #24	ENSGT00950000182936.a.a.a.d #26	ENSGT00940000164246.C.d.a.d #27	ENSGT00940000155116.a.d #28	ENSGT00940000166972.o #29	ENSGT00940000164201.d.a.a	ENSGT00390000003706.a.a.s.a	ENSGT00940000161651.d #30	ENSGT00940000162722.a #31	ENSGT00390000011275 #32	ENSGT00910000144271.C.db.a.b.a #33	ENSGT00910000144271.C.db.a.a.a #33	ENSGT00910000144271.C.db.a.a.b.a #33
Common carp reference	MODERN SPECIES	41	ENSCCRG00000066670	mao (ENSCCRG00000052851)	GPR82 (ENSCCRG00000064640)	caska (ENSCCRG00000074376)	nyx (ENSCCRG00000014064)	ddx3xa (ENSCCRG00000079586)	rpl8 (ENSCCRG00000066809)	usp9 (ENSCCRG00000013998)	ENSCCRG00000054680	ENSCCRG00000066388	ENSCCRG00000010719 #18	atp5po (ENSCCRG00000010715) #19	ENSCCRG00000058759 #20	ENSCCRG00000037801	ENSCCRG00000055393	casq2 (ENSCCRG00000002443) #22	vangl1 (ENSCCRG00000002485) #23	nhlh2 (ENSCCRG00000067895) #24	fhip1b (ENSCCRG00000002501) #26	hpxa (ENSCCRG00000043255) #29	ENSCCRG00000063348 #28	ENSCCRG00000055674	ENSCCRG00000026563	ENSCCRG00000078968	gatd3 (ENSCCRG00000069597)	olig2 (ENSCCRG00000051550) #30	olig1 (ENSCCRG00000080077) #31	ercc1 (ENSCCRG00000059279) #32	ENSCCRG00000003371 #33	ENSCCRG00000003444	dnajb11 (ENSCCRG00000067985)
Golden-line barbel	MODERN SPECIES	208	ccdc80 (ENSSGRG00000035687)	DIPK2B (ENSSGRG00000035689)	ENSSGRG00000035879	fundc1 (ENSSGRG00000047056)	ENSSGRG00000047059	mao (ENSSGRG00000047065)	caska (ENSSGRG00000047146)	GPR82 (ENSSGRG00000047982)	gpr34b (ENSSGRG00000047983)	ddx3xa (ENSSGRG00000048009)	rpl8 (ENSSGRG00000049912)	usp9 (ENSSGRG00000049979)	DOP1B (ENSSGRG00000052099) #18	atp5po (ENSSGRG00000052103) #19	SLC5A3 (ENSSGRG00000052104) #20	casq2 (ENSSGRG00000052111) #22	ENSSGRG00000052174	vangl1 (ENSSGRG00000052175) #23	fhip1b (ENSSGRG00000052176) #26	fhip1b (ENSSGRG00000052177) #26	ENSSGRG00000052179 #27	ENSSGRG00000052180 #28	hpxa (ENSSGRG00000052181) #29	ENSSGRG00000052182	gatd3 (ENSSGRG00000052211)	olig2 (ENSSGRG00000052212) #30	olig1 (ENSSGRG00000052213) #31	ercc1 (ENSSGRG00000052214) #32	ENSSGRG00000052216 #33	ENSSGRG00000052217 #33	ENSSGRG00000052218 #33
Zebrafish	MODERN SPECIES	24	caska (ENSDARG00000059809)	nyx (ENSDARG00000061791)	ddx3xa (ENSDARG00000020573)	rpl8 (ENSDARG00000014867)	usp9 (ENSDARG00000013708)	lectin (ENSDARG00000055833)	ENSDARG00000094183	si:ch211-125e6.13 (ENSDARG00000094370)	si:ch211-125e6.12 (ENSDARG00000092090)	si:ch211-125e6.11 (ENSDARG00000025783)	ENSDARG00000115642	DOP1B (ENSDARG00000055857) #18	atp5po (ENSDARG00000001788) #19	SLC5A3 (ENSDARG00000077812) #20	si:ch211-125e6.8 (ENSDARG00000094518)	casq2 (ENSDARG00000008982) #22	zgc:172053 (ENSDARG00000038321)	ENSDARG00000069381	vangl1 (ENSDARG00000004305) #23	nhlh2 (ENSDARG00000025495) #24	ENSDARG00000069383 #25	fhip1b (ENSDARG00000078188) #26	ENSDARG00000007077 #28	hpxa (ENSDARG00000012609) #29	mxe (ENSDARG00000014427)	mxc (ENSDARG00000024789)	gatd3 (ENSDARG00000020618)	olig2 (ENSDARG00000040946) #30	olig1 (ENSDARG00000040948) #31	ercc1 (ENSDARG00000031680) #32	gzm3.4 (ENSDARG00000076814) #33
Euteleosteomorpha	ANCESTRAL SPECIES	6	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.f #10	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00900000141090.t #15	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00390000015060 #19	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Acanthomorphata	ANCESTRAL SPECIES	5	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Euacanthomorphacea	ANCESTRAL SPECIES	15	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A
Percomorphaceae	ANCESTRAL SPECIES	23	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722
Percomorphaceae_B	ANCESTRAL SPECIES	17	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Ovalentaria	ANCESTRAL SPECIES	14	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Ovalentaria_B	ANCESTRAL SPECIES	12	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Pomacentridae	ANCESTRAL SPECIES	17	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A
Pomacentridae_A	ANCESTRAL SPECIES	14	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Amphiprion	ANCESTRAL SPECIES	8	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Clown anemonefish	MODERN SPECIES	1774	prkcha (ENSAOCG00000007835)	hif1ab (ENSAOCG00000007901)	si:dkey-33c12.12 (ENSAOCG00000007923)	ENSAOCG00000000450	ENSAOCG00000007956	gja8a (ENSAOCG00000007974) #9	gja5a (ENSAOCG00000007998) #12	acp6 (ENSAOCG00000008035) #13	bcl9 (ENSAOCG00000008049) #14	ENSAOCG00000008064 #15	chaf1b (ENSAOCG00000008102) #16	morc3a (ENSAOCG00000008123) #17	DOP1B (ENSAOCG00000008220) #18	SLC5A3 (ENSAOCG00000008236) #20	KCNE2 (ENSAOCG00000008246) #21	casq2 (ENSAOCG00000008282) #22	vangl1 (ENSAOCG00000002348) #23	nhlh2 (ENSAOCG00000008317) #24	ENSAOCG00000008326	ENSAOCG00000008337	ackr3a (ENSAOCG00000008342)	ENSAOCG00000002566
Orange clownfish	MODERN SPECIES	3	gsk3ba (ENSAPEG00000000490)	GPR156 (ENSAPEG00000000409)	LRRC58 (ENSAPEG00000000383) ##7	fstl1b (ENSAPEG00000000309) ##8	ENSAPEG00000024456	gja8a (ENSAPEG00000024449) #9	gja5a (ENSAPEG00000024446) #12	acp6 (ENSAPEG00000024439) #13	bcl9 (ENSAPEG00000024430) #14	ENSAPEG00000024416 #15	chaf1b (ENSAPEG00000024404) #16	morc3a (ENSAPEG00000024391) #17	DOP1B (ENSAPEG00000024373) #18	SLC5A3 (ENSAPEG00000024368) #20	KCNE2 (ENSAPEG00000024365) #21	casq2 (ENSAPEG00000024357) #22	vangl1 (ENSAPEG00000024349) #23	nhlh2 (ENSAPEG00000024344) #24	ENSAPEG00000024334	ackr3a (ENSAPEG00000024332)	rpe (ENSAPEG00000024325)	igsf3 (ENSAPEG00000024311)	igsf3l (ENSAPEG00000024301)	ENSAPEG00000024290	ANOS1 (ENSAPEG00000024268)	tbl1x (ENSAPEG00000024249)	GPR143 (ENSAPEG00000024242)	ENSAPEG00000024230	mospd2 (ENSAPEG00000024212)	FANCB (ENSAPEG00000024199)	ENSAPEG00000024192
Spiny chromis	MODERN SPECIES	469	FMOD (ENSAPOG00000003439)	ENSAPOG00000003429	ren (ENSAPOG00000003412)	MAGI1 (ENSAPOG00000003337)	rho (ENSAPOG00000003170)	gja5a (ENSAPOG00000003144) #12	acp6 (ENSAPOG00000003134) #13	bcl9 (ENSAPOG00000003113) #14	ENSAPOG00000003097	chaf1b (ENSAPOG00000003088) #16	ENSAPOG00000003055 #17	ENSAPOG00000003043 #17	DOP1B (ENSAPOG00000003000) #18	SLC5A3 (ENSAPOG00000002894) #20	KCNE2 (ENSAPOG00000002888) #21	casq2 (ENSAPOG00000002876) #22	vangl1 (ENSAPOG00000002844) #23	nhlh2 (ENSAPOG00000002819) #24
Bicolor damselfish	MODERN SPECIES	292							gja5a (ENSSPAG00000006808) #12	acp6 (ENSSPAG00000006814) #13	bcl9 (ENSSPAG00000006843) #14	ENSSPAG00000006866 #15	chaf1b (ENSSPAG00000006887) #16	morc3a (ENSSPAG00000006940) #17	DOP1B (ENSSPAG00000006986) #18	SLC5A3 (ENSSPAG00000007099) #20	KCNE2 (ENSSPAG00000007102) #21	casq2 (ENSSPAG00000007124) #22	vangl1 (ENSSPAG00000007172) #23	nhlh2 (ENSSPAG00000007338) #24	nqo1 (ENSSPAG00000007347)	ackr3a (ENSSPAG00000007360)	rpe (ENSSPAG00000007370)	igsf3 (ENSSPAG00000007404)	igsf3l (ENSSPAG00000007418)	klhl6 (ENSSPAG00000007437)	ANOS1 (ENSSPAG00000007470)	tbl1x (ENSSPAG00000007535)	GPR143 (ENSSPAG00000007624)	ENSSPAG00000007649	mospd2 (ENSSPAG00000007669)	ENSSPAG00000007738	glra2 (ENSSPAG00000007787)
Cichlidae	ANCESTRAL SPECIES	14	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.l.b	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Pseudocrenilabrinae	ANCESTRAL SPECIES	15	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.l.b	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	14	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Haplochromini	ANCESTRAL SPECIES	19	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a.i.b	ENSGT00940000155177.a.i.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Haplochromini_A	ANCESTRAL SPECIES	19	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a.i.b	ENSGT00940000155177.a.i.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Haplochromini_B	ANCESTRAL SPECIES	17	ENSGT00940000175300.k	ENSGT00940000164822.k.a.a.a.b.b	ENSGT00940000164822.k.a.b.b.b	ENSGT00940000164822.k.a.b.b.a	ENSGT00940000164822.k.a.b.a.a.a.a	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a.i.b	ENSGT00940000155177.a.i.a	ENSGT00940000164826	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Zebra mbuna	MODERN SPECIES	1098	ENSMZEG00005001772	ENSMZEG00005001797	ENSMZEG00005001804	gja8a (ENSMZEG00005001816) #9	gja5a (ENSMZEG00005001838) #12	acp6 (ENSMZEG00005001843) #13	bcl9 (ENSMZEG00005001856) #14	ENSMZEG00005001866	chaf1b (ENSMZEG00005001892) #16	ENSMZEG00005001945	ENSMZEG00005001951 #17	DOP1B (ENSMZEG00005001983) #18	ENSMZEG00005002052 #18	SLC5A3 (ENSMZEG00005002056) #20	KCNE2 (ENSMZEG00005002067) #21	casq2 (ENSMZEG00005002075) #22	vangl1 (ENSMZEG00005002094) #23	nhlh2 (ENSMZEG00005002125) #24	ackr3a (ENSMZEG00005002132)	rpe (ENSMZEG00005002138)	igsf3 (ENSMZEG00005002160)	ENSMZEG00005002171	ENSMZEG00005002195	ENSMZEG00005002227	ENSMZEG00005002238	ANOS1 (ENSMZEG00005002260)	tbl1x (ENSMZEG00005002314)	GPR143 (ENSMZEG00005002341)	ENSMZEG00005002363	mospd2 (ENSMZEG00005002380)	FANCB (ENSMZEG00005002402)
Eastern happy	MODERN SPECIES	7	ENSACLG00000004777	ENSACLG00000004802	ENSACLG00000005039	ENSACLG00000005060	ENSACLG00000005109	gja8a (ENSACLG00000005156) #9	gja5a (ENSACLG00000005160) #12	acp6 (ENSACLG00000005168) #13	bcl9 (ENSACLG00000005177) #14	ENSACLG00000005189	chaf1b (ENSACLG00000005219) #16	morc3a (ENSACLG00000005265) #17	DOP1B (ENSACLG00000005329) #18	SLC5A3 (ENSACLG00000005376) #20	KCNE2 (ENSACLG00000005384) #21	casq2 (ENSACLG00000005396) #22	vangl1 (ENSACLG00000005437) #23	nhlh2 (ENSACLG00000005482) #24	ackr3a (ENSACLG00000005485)	rpe (ENSACLG00000005497)	igsf3 (ENSACLG00000005518)	ENSACLG00000005742	ENSACLG00000005759	ENSACLG00000005779	ENSACLG00000005794	ANOS1 (ENSACLG00000005803)	tbl1x (ENSACLG00000005835)	GPR143 (ENSACLG00000005881)	ENSACLG00000005897	mospd2 (ENSACLG00000005925)	ENSACLG00000005961
P. nyererei	MODERN SPECIES	304		ENSPNYG00000012713	ENSPNYG00000012645	gja8a (ENSPNYG00000012616) #9	gja5a (ENSPNYG00000012602) #12	acp6 (ENSPNYG00000012584) #13	bcl9 (ENSPNYG00000012543) #14	ENSPNYG00000012521	ENSPNYG00000012507	chaf1b (ENSPNYG00000012461) #16	ENSPNYG00000012436	ENSPNYG00000012414 #17	DOP1B (ENSPNYG00000012358) #18	SLC5A3 (ENSPNYG00000012344) #20	KCNE2 (ENSPNYG00000012323) #21	casq2 (ENSPNYG00000012288) #22	vangl1 (ENSPNYG00000012260) #23	nhlh2 (ENSPNYG00000012244) #24	ackr3a (ENSPNYG00000012239)	rpe (ENSPNYG00000012213)	igsf3 (ENSPNYG00000012189)	igsf3l (ENSPNYG00000012155)	ENSPNYG00000012130	ANOS1 (ENSPNYG00000012090)	tbl1x (ENSPNYG00000012036)	GPR143 (ENSPNYG00000012006)	ENSPNYG00000011948	mospd2 (ENSPNYG00000011916)	ENSPNYG00000011890	glra2 (ENSPNYG00000011852)	ENSPNYG00000011836
Burton s mouthbrooder	MODERN SPECIES	311				ENSHBUG00000001548	gja8a (ENSHBUG00000001540) #9	gja5a (ENSHBUG00000001539) #12	acp6 (ENSHBUG00000001532) #13	bcl9 (ENSHBUG00000001527) #14	ENSHBUG00000023836	chaf1b (ENSHBUG00000023806) #16	morc3a (ENSHBUG00000023707) #17	DOP1B (ENSHBUG00000023676) #18	ENSHBUG00000023545 #18	SLC5A3 (ENSHBUG00000023535) #20	KCNE2 (ENSHBUG00000023528) #21	casq2 (ENSHBUG00000023521) #22	vangl1 (ENSHBUG00000023475) #23	nhlh2 (ENSHBUG00000023405) #24	ENSHBUG00000023391	ackr3a (ENSHBUG00000023373)	rpe (ENSHBUG00000023369)	igsf3 (ENSHBUG00000023347)	ENSHBUG00000023333	ENSHBUG00000023298	ENSHBUG00000023033	ENSHBUG00000023005	ANOS1 (ENSHBUG00000022998)	tbl1x (ENSHBUG00000022909)	GPR143 (ENSHBUG00000022861)	ENSHBUG00000022832	mospd2 (ENSHBUG00000022824)
Lyretail cichlid	MODERN SPECIES	303	ENSNBRG00000007418	ENSNBRG00000007422	ENSNBRG00000007459	ENSNBRG00000007484	gja8a (ENSNBRG00000007490) #9	gja5a (ENSNBRG00000007508) #12	acp6 (ENSNBRG00000007530) #13	bcl9 (ENSNBRG00000007614) #14	ENSNBRG00000007688	chaf1b (ENSNBRG00000007708) #16	ENSNBRG00000007734	ENSNBRG00000007753 #17	DOP1B (ENSNBRG00000007812) #18	SLC5A3 (ENSNBRG00000007950) #20	KCNE2 (ENSNBRG00000007957) #21	casq2 (ENSNBRG00000007969) #22	vangl1 (ENSNBRG00000008009) #23	nhlh2 (ENSNBRG00000008044) #24	ackr3a (ENSNBRG00000008055)	rpe (ENSNBRG00000008060)	igsf3 (ENSNBRG00000008087)	ENSNBRG00000008150	ENSNBRG00000008187	ENSNBRG00000008279	ANOS1 (ENSNBRG00000008319)	tbl1x (ENSNBRG00000008372)	GPR143 (ENSNBRG00000008423)	ENSNBRG00000008457	mospd2 (ENSNBRG00000008495)	ENSNBRG00000008536	glra2 (ENSNBRG00000008576)
Nile tilapia	MODERN SPECIES	7	ENSONIG00000015970	ENSONIG00000032917	ENSONIG00000035487	ENSONIG00000041854	ENSONIG00000015143	ENSONIG00000003472	gja8a (ENSONIG00000020669) #9	gja5a (ENSONIG00000020670) #12	acp6 (ENSONIG00000015974) #13	bcl9 (ENSONIG00000015978) #14	ENSONIG00000035799	chaf1b (ENSONIG00000015981) #16	DOP1B (ENSONIG00000015987) #18	SLC5A3 (ENSONIG00000020671) #20	KCNE2 (ENSONIG00000040885) #21	casq2 (ENSONIG00000027104) #22	vangl1 (ENSONIG00000016004) #23	nhlh2 (ENSONIG00000020673) #24	rpe (ENSONIG00000016008)	igsf3 (ENSONIG00000016010)	ENSONIG00000042158	ENSONIG00000016013	ENSONIG00000036502	ANOS1 (ENSONIG00000016014)	tbl1x (ENSONIG00000016020)	GPR143 (ENSONIG00000016023)	ENSONIG00000016027	mospd2 (ENSONIG00000016029)	ENSONIG00000032474	glra2 (ENSONIG00000016034)	gpm6bb (ENSONIG00000016037)
Midas cichlid	MODERN SPECIES	992	ENSACIG00000016961	ENSACIG00000016971	ENSACIG00000016976	ENSACIG00000016993	gja8a (ENSACIG00000017010) #9	acp6 (ENSACIG00000017042) #13	bcl9 (ENSACIG00000017075) #14	ENSACIG00000017321	ENSACIG00000017344	chaf1b (ENSACIG00000017355) #16	ENSACIG00000017373 #17	ENSACIG00000017382 #17	DOP1B (ENSACIG00000017406) #18	SLC5A3 (ENSACIG00000017624) #20	KCNE2 (ENSACIG00000017630) #21	casq2 (ENSACIG00000017635) #22	vangl1 (ENSACIG00000017659) #23	nhlh2 (ENSACIG00000017676) #24	ackr3a (ENSACIG00000017679)	rpe (ENSACIG00000017691)	igsf3 (ENSACIG00000017701)	igsf3l (ENSACIG00000017724)	ENSACIG00000017746	ENSACIG00000017774	ANOS1 (ENSACIG00000017781)	tbl1x (ENSACIG00000017803)	GPR143 (ENSACIG00000017825)	ENSACIG00000017836	mospd2 (ENSACIG00000017859)	ENSACIG00000017874	glra2 (ENSACIG00000017897)
Atherinomorphae	ANCESTRAL SPECIES	13	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT00940000159150	ENSGT00940000155010.a	ENSGT01030000235215	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722
Cyprinodontiformes	ANCESTRAL SPECIES	15	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Aplocheiloidei	ANCESTRAL SPECIES	6	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000159150	ENSGT00940000155010.a	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A
Mangrove rivulus	MODERN SPECIES	66		ENSKMAG00000018671	ENSKMAG00000018655	ENSKMAG00000018639	gja8a (ENSKMAG00000018630) #9	gja5a (ENSKMAG00000018619) #12	acp6 (ENSKMAG00000018604) #13	bcl9 (ENSKMAG00000018575) #14	ENSKMAG00000018553 #15	chaf1b (ENSKMAG00000018508) #16	ENSKMAG00000018484 #17	ENSKMAG00000018469	ENSKMAG00000018452 #17	DOP1B (ENSKMAG00000018414) #18	SLC5A3 (ENSKMAG00000018395) #20	casq2 (ENSKMAG00000018355) #22	vangl1 (ENSKMAG00000018331) #23	nqo1 (ENSKMAG00000018308)	ENSKMAG00000018273	NQO2 (ENSKMAG00000018255)	ackr3a (ENSKMAG00000018245)	rpe (ENSKMAG00000018226)	igsf3 (ENSKMAG00000018207)	igsf3l (ENSKMAG00000018184)	klhl6 (ENSKMAG00000018152)	ENSKMAG00000018119	ENSKMAG00000018104	ANOS1 (ENSKMAG00000018037)	tbl1x (ENSKMAG00000017972)	GPR143 (ENSKMAG00000017944)	ENSKMAG00000017916
Turquoise killifish	MODERN SPECIES	1623	ENSNFUG00015007541	LRRC58B (ENSNFUG00015007547) ##7	fstl1b (ENSNFUG00015007573) ##8	ENSNFUG00015007639	gja8a (ENSNFUG00015007658) #9	ENSNFUG00015007661 #11	CX45.6 (ENSNFUG00015007663) #12	ACP6 (ENSNFUG00015007668) #13	BCL9 (ENSNFUG00015007689) #14	ENSNFUG00015007697	chaf1b (ENSNFUG00015007708) #16	MORC3B (ENSNFUG00015007730) #17	DOPEY2 (ENSNFUG00015007747) #18	SLC5A3 (ENSNFUG00015007757) #20	ENSNFUG00015007759	casq2 (ENSNFUG00015007835) #22	vangl1 (ENSNFUG00015008448) #23	ENSNFUG00015008472 ##24	NQO2 (ENSNFUG00015008486)	RPE (ENSNFUG00015008506)	igsf3 (ENSNFUG00015008515)	ENSNFUG00015008521	igsf3l (ENSNFUG00015008524)	KLHL6 (ENSNFUG00015008532)	ENSNFUG00015008537	ENSNFUG00015008548	KAL1 (ENSNFUG00015008575)	tbl1x (ENSNFUG00015008718)	GPR143 (ENSNFUG00015008745)	ENSNFUG00015008748	MOSPD2 (ENSNFUG00015008752)
Cyprinodontoidei	ANCESTRAL SPECIES	13	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
NAME_4	ANCESTRAL SPECIES	25	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b.i.a	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000164826	ENSGT01030000234540.A.b
Sheepshead minnow	MODERN SPECIES	1208													DOP1B (ENSCVAG00000005644) #18	ENSCVAG00000005480 #18	SLC5A3 (ENSCVAG00000005451) #20	casq2 (ENSCVAG00000005447) #22	vangl1 (ENSCVAG00000000158) #23	ENSCVAG00000005410	ENSCVAG00000005391	ackr3a (ENSCVAG00000000151)
Mummichog	MODERN SPECIES	2440					ENSFHEG00000017646	gja8a (ENSFHEG00000017667) #9	gja5a (ENSFHEG00000017671) #12	acp6 (ENSFHEG00000017697) #13	bcl9 (ENSFHEG00000017704) #14	ENSFHEG00000017713 #15	chaf1b (ENSFHEG00000017756) #16	ENSFHEG00000017778	ENSFHEG00000017794 #17	DOP1B (ENSFHEG00000018127) #18	SLC5A3 (ENSFHEG00000018150) #20	casq2 (ENSFHEG00000018252) #22	vangl1 (ENSFHEG00000018283) #23	ENSFHEG00000018297 ##24	ENSFHEG00000018317	NQO2 (ENSFHEG00000018342)	ackr3a (ENSFHEG00000018359)	rpe (ENSFHEG00000018385)	igsf3 (ENSFHEG00000018390)	ENSFHEG00000018406	ENSFHEG00000018463	ENSFHEG00000018486	ENSFHEG00000018498	ANOS1 (ENSFHEG00000018566)
Poeciliinae	ANCESTRAL SPECIES		ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Poecilia	ANCESTRAL SPECIES	13	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b.e	ENSGT00940000156563.b.f	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
NAME_6	ANCESTRAL SPECIES	20				ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000173749	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b.e	ENSGT00940000156563.b.f	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730.i
Sailfin molly	MODERN SPECIES	230								ENSPLAG00000008243	ENSPLAG00000008228	chaf1b (ENSPLAG00000008208) #16	ENSPLAG00000008174	ENSPLAG00000008163 #17	DOP1B (ENSPLAG00000008156) #18	ENSPLAG00000008093 #18	SLC5A3 (ENSPLAG00000008080) #20	casq2 (ENSPLAG00000008074) #22	vangl1 (ENSPLAG00000008041) #23	ENSPLAG00000008011	ENSPLAG00000007997	ackr3a (ENSPLAG00000000170)	rpe (ENSPLAG00000007977)	igsf3 (ENSPLAG00000007957)	ENSPLAG00000007902	klhl6 (ENSPLAG00000007830)
Amazon molly	MODERN SPECIES	268								gja8a (ENSPFOG00000020135) #9	gja5a (ENSPFOG00000000712) #12	acp6 (ENSPFOG00000000741) #13	bcl9 (ENSPFOG00000000816) #14	ENSPFOG00000000866 #15	chaf1b (ENSPFOG00000000916) #16	DOP1B (ENSPFOG00000001181) #18	SLC5A3 (ENSPFOG00000020138) #20	casq2 (ENSPFOG00000001603) #22	vangl1 (ENSPFOG00000001704) #23	NQO2 (ENSPFOG00000001802)	ackr3a (ENSPFOG00000020140)	rpe (ENSPFOG00000001914)	igsf3 (ENSPFOG00000002036)	ENSPFOG00000002302	klhl6 (ENSPFOG00000002369)	ANOS1 (ENSPFOG00000002437)	tbl1x (ENSPFOG00000002848)	GPR143 (ENSPFOG00000002963)	ENSPFOG00000003031	mospd2 (ENSPFOG00000003096)	ENSPFOG00000003321	glra2 (ENSPFOG00000003430)	mospd2 (ENSPFOG00000003570)
Guppy	MODERN SPECIES	450	gsk3ba (ENSPREG00000000763)	GPR156 (ENSPREG00000000813)	LRRC58 (ENSPREG00000000835) ##7	fstl1b (ENSPREG00000000857) ##8	ENSPREG00000000895	gja8a (ENSPREG00000000906) #9	gja5a (ENSPREG00000000914) #12	acp6 (ENSPREG00000000930) #13	bcl9 (ENSPREG00000000937) #14	ENSPREG00000000946 #15	chaf1b (ENSPREG00000000956) #16	ENSPREG00000000961	ENSPREG00000000975 #17	DOP1B (ENSPREG00000001003) #18	SLC5A3 (ENSPREG00000001022) #20	casq2 (ENSPREG00000001027) #22	vangl1 (ENSPREG00000001072) #23	ENSPREG00000001082	ENSPREG00000001100	ENSPREG00000001163	ackr3a (ENSPREG00000001170)	rpe (ENSPREG00000001185)	igsf3 (ENSPREG00000001212)	klhl6 (ENSPREG00000001224)	ENSPREG00000001251	ENSPREG00000001291	ANOS1 (ENSPREG00000001327)	tbl1x (ENSPREG00000001406)	GPR143 (ENSPREG00000001452)	ENSPREG00000001482	mospd2 (ENSPREG00000001547)
Platyfish	MODERN SPECIES	21	fstl1b (ENSXMAG00000004055) ##8	ENSXMAG00000027373	ENSXMAG00000024723	gja8a (ENSXMAG00000004073) #9	ENSXMAG00000022712	gja5a (ENSXMAG00000004079) #12	acp6 (ENSXMAG00000023912) #13	bcl9 (ENSXMAG00000004093) #14	ENSXMAG00000027689	ENSXMAG00000027739	chaf1b (ENSXMAG00000004101) #16	morc3a (ENSXMAG00000004110) #17	ENSXMAG00000024686 #17	DOP1B (ENSXMAG00000004151) #18	SLC5A3 (ENSXMAG00000019568) #20	casq2 (ENSXMAG00000004185) #22	vangl1 (ENSXMAG00000004211) #23	ENSXMAG00000004231	ENSXMAG00000022658	ackr3a (ENSXMAG00000019569)	rpe (ENSXMAG00000004245)	igsf3 (ENSXMAG00000004255)	ENSXMAG00000004264	klhl6 (ENSXMAG00000024721)	ENSXMAG00000004290	ANOS1 (ENSXMAG00000004292)	tbl1x (ENSXMAG00000004308)	GPR143 (ENSXMAG00000004334)	ENSXMAG00000004342	mospd2 (ENSXMAG00000004358)	FANCB (ENSXMAG00000004369)
Oryzias	ANCESTRAL SPECIES	10	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.i.a	ENSGT00940000175300	ENSGT00940000164822.j	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a.q #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b.m	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Oryzias_b	ANCESTRAL SPECIES	10	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.i.a	ENSGT00940000175300	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160.i #17	ENSGT00390000016421.b.a.r #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00940000166160.j #17	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b.m	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Indian medaka	MODERN SPECIES	18	ENSOMEG00000008266	ENSOMEG00000008245	ENSOMEG00000008233	ENSOMEG00000008202	gja8a (ENSOMEG00000008156) #9	gja5a (ENSOMEG00000008145) #12	acp6 (ENSOMEG00000001035) #13	bcl9 (ENSOMEG00000008102) #14	ENSOMEG00000008042	chaf1b (ENSOMEG00000008033) #16	ENSOMEG00000007987 #17	casq2 (ENSOMEG00000007893) #22	DOP1B (ENSOMEG00000007865) #18	ENSOMEG00000007829 #18	SLC5A3 (ENSOMEG00000007813) #20	casq2 (ENSOMEG00000007803) #22	ENSOMEG00000007783 #17	ENSOMEG00000007772 #17	ENSOMEG00000007764	ENSOMEG00000007752	vangl1 (ENSOMEG00000000817) #23	ENSOMEG00000007696	ENSOMEG00000007678	ackr3a (ENSOMEG00000007664)	rpe (ENSOMEG00000000188)	igsf3 (ENSOMEG00000007603)	ENSOMEG00000007569	klhl6 (ENSOMEG00000007526)	ENSOMEG00000007452	ANOS1 (ENSOMEG00000007271)	tbl1x (ENSOMEG00000007223)
Indian medaka	MODERN SPECIES	18	ENSOMEG00000007569	igsf3 (ENSOMEG00000007603)	rpe (ENSOMEG00000000188)	ackr3a (ENSOMEG00000007664)	ENSOMEG00000007678	ENSOMEG00000007696	vangl1 (ENSOMEG00000000817) #23	ENSOMEG00000007752	ENSOMEG00000007764	ENSOMEG00000007772 #17	ENSOMEG00000007783 #17	casq2 (ENSOMEG00000007803) #22	SLC5A3 (ENSOMEG00000007813) #20	ENSOMEG00000007829 #18	DOP1B (ENSOMEG00000007865) #18	casq2 (ENSOMEG00000007893) #22	ENSOMEG00000007987 #17	chaf1b (ENSOMEG00000008033) #16	ENSOMEG00000008042	bcl9 (ENSOMEG00000008102) #14	acp6 (ENSOMEG00000001035) #13	gja5a (ENSOMEG00000008145) #12	gja8a (ENSOMEG00000008156) #9	ENSOMEG00000008202	ENSOMEG00000008233	ENSOMEG00000008245	ENSOMEG00000008266	fstl1b (ENSOMEG00000008314) ##8	LRRC58 (ENSOMEG00000008345) ##7	ENSOMEG00000008397	GPR156 (ENSOMEG00000008430)
Javanese ricefish	MODERN SPECIES	13	gsk3ba (ENSOJAG00000008148)	GPR156 (ENSOJAG00000008343)	LRRC58 (ENSOJAG00000008369) ##7	fstl1b (ENSOJAG00000008376) ##8	ENSOJAG00000008398	ENSOJAG00000008475	gja8a (ENSOJAG00000008516) #9	gja5a (ENSOJAG00000008538) #12	acp6 (ENSOJAG00000008554) #13	bcl9 (ENSOJAG00000008778) #14	ENSOJAG00000008794	chaf1b (ENSOJAG00000008818) #16	ENSOJAG00000008856 #17	ENSOJAG00000008881 #17	SLC5A3 (ENSOJAG00000009006) #20	casq2 (ENSOJAG00000009033) #22	ENSOJAG00000009344 #17	vangl1 (ENSOJAG00000009411) #23	ENSOJAG00000009424	ackr3a (ENSOJAG00000009475)	rpe (ENSOJAG00000009482)	igsf3 (ENSOJAG00000009511)	ENSOJAG00000009562	klhl6 (ENSOJAG00000009631)	ENSOJAG00000009664	ANOS1 (ENSOJAG00000009704)	tbl1x (ENSOJAG00000010027)	GPR143 (ENSOJAG00000010280)	ENSOJAG00000010319	mospd2 (ENSOJAG00000010431)	ENSOJAG00000011650
Oryzias_a	ANCESTRAL SPECIES	21	ENSGT00940000159755	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.i.a.a.a.a.a.a	ENSGT00940000164822.j	ENSGT01050000244864.D #9	ENSGT01030000235357.b.b.b	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a.q #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b.m	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Japanese Medaka HdrR	MODERN SPECIES	13	ENSORLG00000027542	ENSORLG00000027779	gja8a (ENSORLG00000017928) #9	ENSORLG00000022370	gja5a (ENSORLG00000017925) #12	acp6 (ENSORLG00000017924) #13	bcl9 (ENSORLG00000017920) #14	ENSORLG00000028455	chaf1b (ENSORLG00000017915) #16	ENSORLG00000017907 #17	ENSORLG00000017912 #17	ENSORLG00000017910 #17	ENSORLG00000024053 #17	DOP1B (ENSORLG00000017902) #18	SLC5A3 (ENSORLG00000017889) #20	casq2 (ENSORLG00000017885) #22	vangl1 (ENSORLG00000017880) #23	ENSORLG00000007464	ENSORLG00000030361	nqo1 (ENSORLG00000017876)	ackr3a (ENSORLG00000017874)	rpe (ENSORLG00000017873)	igsf3 (ENSORLG00000017870)	igsf3l (ENSORLG00000025661)	klhl6 (ENSORLG00000017867)	ENSORLG00000017860	anos1 (ENSORLG00000017858)	tbl1x (ENSORLG00000017855)	GPR143 (ENSORLG00000017851)	ENSORLG00000017849	mospd2 (ENSORLG00000017842)
Chinese medaka	MODERN SPECIES	394						gja8a (ENSOSIG00000014884) #9	ENSOSIG00000014881	gja5a (ENSOSIG00000014879) #12	acp6 (ENSOSIG00000014876) #13	bcl9 (ENSOSIG00000014872) #14	ENSOSIG00000014868	chaf1b (ENSOSIG00000014860) #16	ENSOSIG00000014859 #17	DOP1B (ENSOSIG00000014858) #18	SLC5A3 (ENSOSIG00000014857) #20	casq2 (ENSOSIG00000014364) #22	vangl1 (ENSOSIG00000014355) #23	ackr3a (ENSOSIG00000014354)	rpe (ENSOSIG00000014353)	igsf3 (ENSOSIG00000014352)	ENSOSIG00000014350	klhl6 (ENSOSIG00000014347)	ANOS1 (ENSOSIG00000014335)	tbl1x (ENSOSIG00000014322)	GPR143 (ENSOSIG00000014321)	ENSOSIG00000014318	mospd2 (ENSOSIG00000013664)	ENSOSIG00000013629	glra2 (ENSOSIG00000013627)	gpm6bb (ENSOSIG00000013620)	ofd1 (ENSOSIG00000013614)
Percomorphaceae_C	ANCESTRAL SPECIES	13	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Percomorphaceae_D	ANCESTRAL SPECIES	12	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Anabantaria	ANCESTRAL SPECIES	14	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Anabantoidei	ANCESTRAL SPECIES	13	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Climbing perch	MODERN SPECIES	12	ENSATEG00000012117	ENSATEG00000012189	ENSATEG00000012100	ENSATEG00000012167	ENSATEG00000012141	gja8a (ENSATEG00000012211) #9	gja5a (ENSATEG00000012229) #12	acp6 (ENSATEG00000012231) #13	BCL9 (ENSATEG00000012242) #14	ENSATEG00000012256 #15	chaf1b (ENSATEG00000012270) #16	ENSATEG00000012346 #17	DOP1B (ENSATEG00000012362) #18	ENSATEG00000012522 #20	ENSATEG00000012531 #21	casq2 (ENSATEG00000012550) #22	vangl1 (ENSATEG00000012612) #23	nhlh2 (ENSATEG00000012652) #24	ENSATEG00000012662	ENSATEG00000012769	ENSATEG00000012773	ENSATEG00000012810	ENSATEG00000012821	ENSATEG00000012883	ENSATEG00000012920	ENSATEG00000012934	ANOS1 (ENSATEG00000012963)	tbl1x (ENSATEG00000013047)	GPR143 (ENSATEG00000013114)	ENSATEG00000013144	mospd2 (ENSATEG00000013197)
Zig-zag eel	MODERN SPECIES	13	ENSMAMG00000014638	ENSMAMG00000026812	ENSMAMG00000028402	gja8a (ENSMAMG00000014556) #9	gja5a (ENSMAMG00000014526) #12	acp6 (ENSMAMG00000014510) #13	BCL9 (ENSMAMG00000014495) #14	ENSMAMG00000026547 #15	chaf1b (ENSMAMG00000014431) #16	ENSMAMG00000014384 #17	ENSMAMG00000024662 #17	ENSMAMG00000025712 #17	DOP1B (ENSMAMG00000014338) #18	ENSMAMG00000014326 #20	ENSMAMG00000014281 #21	casq2 (ENSMAMG00000014300) #22	vangl1 (ENSMAMG00000014206) #23	nhlh2 (ENSMAMG00000014190) #24	ENSMAMG00000026040	ENSMAMG00000027350	ENSMAMG00000014140	ENSMAMG00000026128	ENSMAMG00000014081	ENSMAMG00000014050	ENSMAMG00000014042	ENSMAMG00000013976	ENSMAMG00000013933	ENSMAMG00000013886	ANOS1 (ENSMAMG00000013836)	tbl1x (ENSMAMG00000013752)	GPR143 (ENSMAMG00000013719)
Carangaria	ANCESTRAL SPECIES	12	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Carangaria_A	ANCESTRAL SPECIES	11	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Seriola	ANCESTRAL SPECIES	6	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000178262	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000162602	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Greater amberjack	MODERN SPECIES	21	ENSSDUG00000004546	LRRC58 (ENSSDUG00000004505) ##7	fstl1b (ENSSDUG00000004459) ##8	ENSSDUG00000004402	gja8a (ENSSDUG00000004379) #9	gja5a (ENSSDUG00000004370) #12	acp6 (ENSSDUG00000004360) #13	bcl9 (ENSSDUG00000004346) #14	ENSSDUG00000004330 #15	chaf1b (ENSSDUG00000004318) #16	morc3a (ENSSDUG00000004285) #17	ENSSDUG00000004276 #17	DOP1B (ENSSDUG00000004238) #18	SLC5A3 (ENSSDUG00000004227) #20	KCNE2 (ENSSDUG00000004217) #21	casq2 (ENSSDUG00000004187) #22	vangl1 (ENSSDUG00000004075) #23	NHLH2 (ENSSDUG00000004061)	nqo1 (ENSSDUG00000004023)	ackr3a (ENSSDUG00000004014)	rpe (ENSSDUG00000003988)	igsf3 (ENSSDUG00000003975)	igsf3l (ENSSDUG00000003950)	klhl6 (ENSSDUG00000003926)	ENSSDUG00000003866	ANOS1 (ENSSDUG00000003815)	tbl1x (ENSSDUG00000003760)	GPR143 (ENSSDUG00000003740)	asb5b (ENSSDUG00000003624)	mospd2 (ENSSDUG00000003571)	FANCB (ENSSDUG00000003511)
Yellowtail amberjack	MODERN SPECIES	2951	GPR156 (ENSSLDG00000020164)	fstl1b (ENSSLDG00000020188) ##8	ENSSLDG00000020218	ENSSLDG00000020230	gja8a (ENSSLDG00000020245) #9	gja5a (ENSSLDG00000020249) #12	acp6 (ENSSLDG00000020257) #13	bcl9 (ENSSLDG00000020275) #14	ENSSLDG00000020297 #15	chaf1b (ENSSLDG00000020316) #16	ENSSLDG00000020349 #17	ENSSLDG00000020365 #17	DOP1B (ENSSLDG00000020392) #18	SLC5A3 (ENSSLDG00000020531) #20	KCNE2 (ENSSLDG00000020538) #21	casq2 (ENSSLDG00000020552) #22	vangl1 (ENSSLDG00000020575) #23	NHLH2 (ENSSLDG00000020588)	nqo1 (ENSSLDG00000020598)	ackr3a (ENSSLDG00000020631)	rpe (ENSSLDG00000020636)	igsf3 (ENSSLDG00000020652)	igsf3l (ENSSLDG00000020668)	klhl6 (ENSSLDG00000020682)	ENSSLDG00000020715	ANOS1 (ENSSLDG00000020767)	tbl1x (ENSSLDG00000000110)	GPR143 (ENSSLDG00000000218)	ENSSLDG00000000267	mospd2 (ENSSLDG00000000356)	FANCB (ENSSLDG00000000594)
Barramundi perch	MODERN SPECIES	215						gja8a (ENSLCAG00010005633) #9	gja5a (ENSLCAG00010005634) #12	acp6 (ENSLCAG00010005637) #13	bcl9 (ENSLCAG00010005639) #14	ENSLCAG00010005641	chaf1b (ENSLCAG00010005642) #16	morc3a (ENSLCAG00010005656) #17	DOP1B (ENSLCAG00010005667) #18	SLC5A3 (ENSLCAG00010005688) #20	KCNE2 (ENSLCAG00010005691) #21	casq2 (ENSLCAG00010005727) #22	vangl1 (ENSLCAG00010005947) #23	ENSLCAG00010005952 ##24	ENSLCAG00010005955	ackr3a (ENSLCAG00010005960)	rpe (ENSLCAG00010005964)	igsf3 (ENSLCAG00010005973)	igsf3l (ENSLCAG00010005983)	klhl6 (ENSLCAG00010005985)	ENSLCAG00010005989	ANOS1 (ENSLCAG00010006006)	tbl1x (ENSLCAG00010006041)	GPR143 (ENSLCAG00010006058)	ENSLCAG00010006064	mospd2 (ENSLCAG00010006076)	ENSLCAG00010006085
Pleuronectoidei	ANCESTRAL SPECIES	9	ENSGT00940000159755	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.b ##24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Turbot	MODERN SPECIES	5	gsk3ba (ENSSMAG00000018406)	GPR156 (ENSSMAG00000018385)	LRRC58 (ENSSMAG00000018367) ##7	fstl1b (ENSSMAG00000018358) ##8	ENSSMAG00000018316	gja8a (ENSSMAG00000007614) #9	GJA5 (ENSSMAG00000018298) #12	acp6 (ENSSMAG00000018293) #13	BCL9 (ENSSMAG00000018243) #14	ENSSMAG00000018225	chaf1b (ENSSMAG00000018196) #16	ENSSMAG00000018185	ENSSMAG00000018178 #17	ENSSMAG00000025292 #20	ENSSMAG00000033370 #21	casq2 (ENSSMAG00000017981) #22	vangl1 (ENSSMAG00000017970) #23	nhlh2 (ENSSMAG00000037300) ##24	ENSSMAG00000017954	ENSSMAG00000017947	ENSSMAG00000017942	ENSSMAG00000017925	ENSSMAG00000017902	ENSSMAG00000017867	ENSSMAG00000017851	ENSSMAG00000032039	ENSSMAG00000035212	ANOS1 (ENSSMAG00000017769)	tbl1x (ENSSMAG00000017740)	GPR143 (ENSSMAG00000017701)	ENSSMAG00000017665
Tongue sole	MODERN SPECIES	7	ENSCSEG00000011091	ARSD (ENSCSEG00000011073)	ENSCSEG00000011065	snx4 (ENSCSEG00000011051)	ihha (ENSCSEG00000011048)	BIN1 (ENSCSEG00000011011)	TMEM198 (ENSCSEG00000010998)	ENSCSEG00000010988	desma (ENSCSEG00000010970)	ptprna (ENSCSEG00000010945)	ENSCSEG00000010936	ENSCSEG00000010932 #17	DOP1B (ENSCSEG00000010882) #18	SLC5A3 (ENSCSEG00000010879) #20	ENSCSEG00000010876	casq2 (ENSCSEG00000010861) #22	vangl1 (ENSCSEG00000010842) #23	ENSCSEG00000010837	ENSCSEG00000010833	ackr3a (ENSCSEG00000010829)	rpe (ENSCSEG00000010822)	nme9 (ENSCSEG00000010797)	SMARCAL1 (ENSCSEG00000010785)	MARCHF4 (ENSCSEG00000010778)	COL6A2 (ENSCSEG00000010759)	xrcc5 (ENSCSEG00000010680)	TMEM169 (ENSCSEG00000010669)	pfkl (ENSCSEG00000010541)	MAP3K13 (ENSCSEG00000010489)	ENSCSEG00000010429	ENSCSEG00000010405
Eupercaria	ANCESTRAL SPECIES	18	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Tetraodontidae	ANCESTRAL SPECIES		ENSGT00520000055635.c.a.a.b	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Fugu	MODERN SPECIES		LRRC58 (ENSTRUG00000024251) ##7	fstl1b (ENSTRUG00000001760) ##8	ENSTRUG00000017525	ENSTRUG00000024110	ENSTRUG00000032667	ENSTRUG00000029177	gja8a (ENSTRUG00000012308) #9	gja5a (ENSTRUG00000012287) #12	acp6 (ENSTRUG00000012224) #13	bcl9 (ENSTRUG00000012100) #14	ENSTRUG00000030416	chaf1b (ENSTRUG00000012075) #16	ENSTRUG00000023542 #17	DOP1B (ENSTRUG00000011430) #18	SLC5A3 (ENSTRUG00000011373) #20	casq2 (ENSTRUG00000011077) #22	vangl1 (ENSTRUG00000010956) #23	ENSTRUG00000010839	ackr3a (ENSTRUG00000010803)	rpe (ENSTRUG00000010734)	igsf3 (ENSTRUG00000010573)	ENSTRUG00000010560	klhl6 (ENSTRUG00000010244)	ENSTRUG00000002221	ENSTRUG00000001492	ENSTRUG00000031904	ANOS1 (ENSTRUG00000009929)	tbl1x (ENSTRUG00000009728)	GPR143 (ENSTRUG00000009593)	ENSTRUG00000009477	mospd2 (ENSTRUG00000009311)
Tetraodon	MODERN SPECIES	13	CFAP91 (ENSTNIG00000013931)	nr1i2 (ENSTNIG00000013932)	gsk3ba (ENSTNIG00000013933)	ENSTNIG00000001394	ENSTNIG00000013934	LRRC58 (ENSTNIG00000013935) ##7	fstl1b (ENSTNIG00000013936) ##8	gja8a (ENSTNIG00000013937) #9	gja5a (ENSTNIG00000002166) #12	acp6 (ENSTNIG00000013938) #13	bcl9 (ENSTNIG00000013939) #14	chaf1b (ENSTNIG00000013940) #16	ENSTNIG00000013941 #17	DOP1B (ENSTNIG00000013942) #18	SLC5A3 (ENSTNIG00000013943) #20	casq2 (ENSTNIG00000013944) #22	vangl1 (ENSTNIG00000013945) #23	ackr3a (ENSTNIG00000013946)	rpe (ENSTNIG00000013947)	igsf3 (ENSTNIG00000001298)	igsf3 (ENSTNIG00000013948)	ENSTNIG00000013949	klhl6 (ENSTNIG00000013950)	ANOS1 (ENSTNIG00000013951)	tbl1x (ENSTNIG00000013952)	GPR143 (ENSTNIG00000013953)	ENSTNIG00000013954	mospd2 (ENSTNIG00000013955)	FANCB (ENSTNIG00000013956)	glra2 (ENSTNIG00000013957)	gpm6bb (ENSTNIG00000013958)
Eupecaria_A	ANCESTRAL SPECIES	18	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000177402	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Eupecaria_B	ANCESTRAL SPECIES	18	ENSGT00940000157784.c.c ##8	ENSGT00940000178262	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT00940000159150	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A
Eupecaria_C	ANCESTRAL SPECIES	21	ENSGT00940000159755	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885
Gilthead seabream	MODERN SPECIES	23	fstl1b (ENSSAUG00010014500) ##8	ENSSAUG00010014985	ENSSAUG00010014986	ENSSAUG00010014988	gja8a (ENSSAUG00010014989) #9	gja5a (ENSSAUG00010014990) #12	acp6 (ENSSAUG00010014991) #13	bcl9 (ENSSAUG00010014993) #14	ENSSAUG00010014994 #15	chaf1b (ENSSAUG00010014996) #16	morc3a (ENSSAUG00010015001) #17	ENSSAUG00010015003 #17	DOP1B (ENSSAUG00010015009) #18	SLC5A3 (ENSSAUG00010015057) #20	KCNE2 (ENSSAUG00010015058) #21	casq2 (ENSSAUG00010015074) #22	vangl1 (ENSSAUG00010015290) #23	nhlh2 (ENSSAUG00010015293) #24	ENSSAUG00010015294	ACKR3 (ENSSAUG00010015295)	rpe (ENSSAUG00010015297)	igsf3 (ENSSAUG00010015301)	igsf3l (ENSSAUG00010015307)	klhl6 (ENSSAUG00010015319)	ENSSAUG00010015320	ENSSAUG00010015334	ANOS1 (ENSSAUG00010015338)	tbl1x (ENSSAUG00010015343)	GPR143 (ENSSAUG00010015345)	ENSSAUG00010015350	mospd2 (ENSSAUG00010015353)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	18	ENSGT00940000159755	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000175300	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713	ENSGT00390000009885	ENSGT00940000158730
Large yellow croaker	MODERN SPECIES	490	LRRC58 (ENSLCRG00005013630) ##7	fstl1b (ENSLCRG00005013445) ##8	ENSLCRG00005013443	ENSLCRG00005013442	gja8a (ENSLCRG00005013441) #9	gja5a (ENSLCRG00005013440) #12	bcl9 (ENSLCRG00005013437) #14	acp6 (ENSLCRG00005013435) #13	ENSLCRG00005013434	ENSLCRG00005013433	chaf1b (ENSLCRG00005013408) #16	morc3a (ENSLCRG00005013407) #17	DOP1B (ENSLCRG00005013402) #18	SLC5A3 (ENSLCRG00005013400) #20	KCNE2 (ENSLCRG00005013399) #21	casq2 (ENSLCRG00005011359) #22	vangl1 (ENSLCRG00005011331) #23	nhlh2 (ENSLCRG00005011330) #24	NQO1 (ENSLCRG00005011329)	ACKR3 (ENSLCRG00005011328)	rpe (ENSLCRG00005011325)	igsf3 (ENSLCRG00005011321)	igsf3l (ENSLCRG00005011310)	ANOS1 (ENSLCRG00005011295)	tbl1x (ENSLCRG00005011281)	GPR143 (ENSLCRG00005011274)	ENSLCRG00005011273	mospd2 (ENSLCRG00005010404)	ENSLCRG00005010389	glra2 (ENSLCRG00005010386)	gpm6bb (ENSLCRG00005010380)
European seabass	MODERN SPECIES	5	fstl1b (ENSDLAG00005025587) ##8	ENSDLAG00005025582	ENSDLAG00005009959	ENSDLAG00005025580	ENSDLAG00005025579	gja8a (ENSDLAG00005032926) #9	GJA5 (ENSDLAG00005030432) #12	acp6 (ENSDLAG00005033642) #13	BCL9 (ENSDLAG00005025568) #14	ENSDLAG00005025566	chaf1b (ENSDLAG00005025565) #16	ENSDLAG00005025564 #17	ENSDLAG00005030393 #20	DOP1B (ENSDLAG00005025560) #18	ENSDLAG00005026388 #21	casq2 (ENSDLAG00005025524) #22	ENSDLAG00005025518 #23	nhlh2 (ENSDLAG00005028018) #24	ENSDLAG00005030238	ENSDLAG00005025501	ENSDLAG00005032719	ENSDLAG00005025497	ENSDLAG00005025492	ENSDLAG00005025484	ENSDLAG00005025473	ANOS1 (ENSDLAG00005025466)	tbl1x (ENSDLAG00005025457)	GPR143 (ENSDLAG00005025455)	ENSDLAG00005025452	ENSDLAG00005029153	mospd2 (ENSDLAG00005025436)
Perciformes	ANCESTRAL SPECIES	20	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000178262	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Perciformes_a	ANCESTRAL SPECIES	21	ENSGT00940000159755	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000178262	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01090000260658 #11	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Pike perch	MODERN SPECIES	1	CFAP91 (ENSSLUG00000020905)	nr1i2 (ENSSLUG00000020918)	gsk3ba (ENSSLUG00000020985)	GPR156 (ENSSLUG00000021621)	LRRC58 (ENSSLUG00000021623) ##7	fstl1b (ENSSLUG00000021634) ##8	ENSSLUG00000021659	gja8a (ENSSLUG00000021669) #9	gja5a (ENSSLUG00000021675) #12	acp6 (ENSSLUG00000021684) #13	ENSSLUG00000021699 #15	chaf1b (ENSSLUG00000021711) #16	morc3a (ENSSLUG00000021725) #17	DOP1B (ENSSLUG00000021749) #18	KCNE2 (ENSSLUG00000000048) #21	casq2 (ENSSLUG00000000084) #22	vangl1 (ENSSLUG00000000129) #23	nhlh2 (ENSSLUG00000000137) #24	ENSSLUG00000000140	ackr3a (ENSSLUG00000000145)	rpe (ENSSLUG00000000148)	igsf3 (ENSSLUG00000000157)	igsf3l (ENSSLUG00000000172)	klhl6 (ENSSLUG00000000186)	ENSSLUG00000000197	ANOS1 (ENSSLUG00000000213)	tbl1x (ENSSLUG00000000230)	GPR143 (ENSSLUG00000000256)	ENSSLUG00000000266	mospd2 (ENSSLUG00000000271)	ENSSLUG00000000284
Channel bull blenny	MODERN SPECIES	13	gsk3ba (ENSCGOG00000020623)	LRRC58 (ENSCGOG00000021314) ##7	fstl1b (ENSCGOG00000021315) ##8	ENSCGOG00000021330	ENSCGOG00000021332	gja8a (ENSCGOG00000021333) #9	ENSCGOG00000021334 #11	gja5a (ENSCGOG00000021335) #12	acp6 (ENSCGOG00000021346) #13	bcl9 (ENSCGOG00000021350) #14	ENSCGOG00000021356	chaf1b (ENSCGOG00000021364) #16	morc3a (ENSCGOG00000021429) #17	nqo1 (ENSCGOG00000021438)	DOP1B (ENSCGOG00000021457) #18	casq2 (ENSCGOG00000021707) #22	vangl1 (ENSCGOG00000021713) #23	nhlh2 (ENSCGOG00000021714) #24	ackr3a (ENSCGOG00000021715)	rpe (ENSCGOG00000021716)	igsf3 (ENSCGOG00000021723)	igsf3l (ENSCGOG00000021728)	klhl6 (ENSCGOG00000021751)	ENSCGOG00000021753	ANOS1 (ENSCGOG00000021760)	tbl1x (ENSCGOG00000021809)	GPR143 (ENSCGOG00000022078)	ENSCGOG00000022096	mospd2 (ENSCGOG00000022100)	FANCB (ENSCGOG00000022237)	glra2 (ENSCGOG00000022242)
Cottioidei	ANCESTRAL SPECIES	14	ENSGT00940000159755	ENSGT01040000240385.A.b.b.a.b.a.a.b.b	ENSGT00940000156556.g ##7	ENSGT00940000157784.c.c ##8	ENSGT00940000164822	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160 #17	ENSGT00390000016421.b.a #18	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000159150	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT00980000198755	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A	ENSGT00390000016713
Stickleback	MODERN SPECIES	16	ENSGACG00000003633	LRRC58 (ENSGACG00000003643) ##7	ENSGACG00000003646	fstl1b (ENSGACG00000003648) ##8	ENSGACG00000003664	gja8a (ENSGACG00000003667) #9	gja5a (ENSGACG00000003669) #12	acp6 (ENSGACG00000003672) #13	bcl9 (ENSGACG00000003683) #14	ENSGACG00000003689	chaf1b (ENSGACG00000003690) #16	ENSGACG00000003694 #17	DOP1B (ENSGACG00000003701) #18	SLC5A3 (ENSGACG00000003713) #20	KCNE2 (ENSGACG00000003715) #21	casq2 (ENSGACG00000003716) #22	vangl1 (ENSGACG00000003745) #23	nhlh2 (ENSGACG00000003751) #24	nqo1 (ENSGACG00000003752)	ENSGACG00000003754	nqo1 (ENSGACG00000003762)	nqo1 (ENSGACG00000003764)	ENSGACG00000003769	ENSGACG00000003770	nqo1 (ENSGACG00000003776)	ENSGACG00000003783	ENSGACG00000003788	rpe (ENSGACG00000003798)	igsf3 (ENSGACG00000003812)	igsf3l (ENSGACG00000003818)	klhl6 (ENSGACG00000003820)
Lumpfish	MODERN SPECIES	13	GPR156 (ENSCLMG00005014968)	ENSCLMG00005014969	LRRC58 (ENSCLMG00005014971) ##7	fstl1b (ENSCLMG00005014977) ##8	ENSCLMG00005015185	gja8a (ENSCLMG00005015186) #9	gja5a (ENSCLMG00005015187) #12	acp6 (ENSCLMG00005015190) #13	bcl9 (ENSCLMG00005015191) #14	ENSCLMG00005015193	chaf1b (ENSCLMG00005015195) #16	morc3a (ENSCLMG00005015197) #17	DOP1B (ENSCLMG00005015198) #18	SLC5A3 (ENSCLMG00005015200) #20	KCNE2 (ENSCLMG00005015210) #21	casq2 (ENSCLMG00005015211) #22	vangl1 (ENSCLMG00005015212) #23	nhlh2 (ENSCLMG00005015215) #24	NQO1 (ENSCLMG00005015216)	ENSCLMG00005015251	ENSCLMG00005015252	ackr3a (ENSCLMG00005015253)	rpe (ENSCLMG00005015254)	igsf3 (ENSCLMG00005015255)	igsf3l (ENSCLMG00005015260)	klhl6 (ENSCLMG00005015262)	ENSCLMG00005015263	ANOS1 (ENSCLMG00005015265)	tbl1x (ENSCLMG00005015267)	GPR143 (ENSCLMG00005015279)	ENSCLMG00005015285
Ballan wrasse	MODERN SPECIES	810										ENSLBEG00000008585	chaf1b (ENSLBEG00000008609) #16	ENSLBEG00000008655	ENSLBEG00000008671 #17	DOP1B (ENSLBEG00000008732) #18	SLC5A3 (ENSLBEG00000008875) #20	casq2 (ENSLBEG00000008904) #22
Ballan wrasse	MODERN SPECIES	1831															ENSLBEG00000025338 ##20	casq2 (ENSLBEG00000025360) #22
Tiger tail seahorse	MODERN SPECIES	456	gsk3ba (ENSHCOG00000000150)	ENSHCOG00000005283	LRRC58 (ENSHCOG00000005255) ##7	fstl1b (ENSHCOG00000000141) ##8	ENSHCOG00000004744 #11	gja8a (ENSHCOG00000004740) #9	gja5a (ENSHCOG00000004729) #12	acp6 (ENSHCOG00000004720) #13	bcl9 (ENSHCOG00000004712) #14	ENSHCOG00000004702 #15	chaf1b (ENSHCOG00000004695) #16	ENSHCOG00000004657 #18	DOP1B (ENSHCOG00000004648) #18	ENSHCOG00000004602 #17	SLC5A3 (ENSHCOG00000004590) #20	casq2 (ENSHCOG00000004580) #22	vangl1 (ENSHCOG00000004550) #23	nxpe3 (ENSHCOG00000004522)	ackr3a (ENSHCOG00000004447)	rpe (ENSHCOG00000004438)	igsf3 (ENSHCOG00000004403)	ENSHCOG00000004371	ENSHCOG00000004343	ENSHCOG00000004329	ANOS1 (ENSHCOG00000004314)	tbl1x (ENSHCOG00000004264)	GPR143 (ENSHCOG00000004237)	ENSHCOG00000004215	mospd2 (ENSHCOG00000004209)	ENSHCOG00000004192	glra2 (ENSHCOG00000004168)
Pinecone sodierfish	MODERN SPECIES	13	fstl1b (ENSMMDG00005002870) ##8	ENSMMDG00005002832	ENSMMDG00005002822	gja8a (ENSMMDG00005002811) #9	gja5a (ENSMMDG00005002802) #12	acp6 (ENSMMDG00005002762) #13	bcl9 (ENSMMDG00005002739) #14	ENSMMDG00005002727	chaf1b (ENSMMDG00005002685) #16	ENSMMDG00005002600 #17	ENSMMDG00005002564 #17	DOP1B (ENSMMDG00005002545) #18	atp5po (ENSMMDG00005002533) #19	SLC5A3 (ENSMMDG00005002525) #20	KCNE2 (ENSMMDG00005024209) #21	casq2 (ENSMMDG00005024206) #22	vangl1 (ENSMMDG00005024205) #23	nhlh2 (ENSMMDG00005024204) #24	ENSMMDG00005024203	ackr3a (ENSMMDG00005024202)	rpe (ENSMMDG00005024201)	igsf3 (ENSMMDG00005024200)	igsf3l (ENSMMDG00005024198)	klhl6 (ENSMMDG00005024197)	ENSMMDG00005024195	ANOS1 (ENSMMDG00005024190)	tbl1x (ENSMMDG00005024185)	GPR143 (ENSMMDG00005024183)	ENSMMDG00005024181	mospd2 (ENSMMDG00005024100)	FANCB (ENSMMDG00005024076)
Cod	MODERN SPECIES	12	nfe2l2a (ENSGMOG00000004196)	ENSGMOG00000030426	agps (ENSGMOG00000004161)	ENSGMOG00000004113	ENSGMOG00000025591	ENSGMOG00000004037	prkra (ENSGMOG00000023426)	ENSGMOG00000025425	ENSGMOG00000007814	ENSGMOG00000004002	ENSGMOG00000035579	ENSGMOG00000032270	ENSGMOG00000010998 #18	ENSGMOG00000011067 #20	ENSGMOG00000020229 #21	casq2 (ENSGMOG00000011071) #22	ENSGMOG00000028003	vangl1 (ENSGMOG00000007036) #23	ENSGMOG00000031399	ENSGMOG00000029492	ENSGMOG00000036777	ENSGMOG00000028480	ENSGMOG00000003851	ENSGMOG00000011368	ENSGMOG00000011382	ENSGMOG00000037130	ENSGMOG00000023302	tbl1x (ENSGMOG00000011402)	ENSGMOG00000011413	ENSGMOG00000011422	mospd2 (ENSGMOG00000011428)
Protacanthopterygii	ANCESTRAL SPECIES	109	ENSGT00940000157784.c.c ##8	ENSGT00940000164822.db	ENSGT00520000055635.c.a.a.a	ENSGT00940000156556.h #7	ENSGT00940000157784.c.d #8	ENSGT01050000244864.D #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408 #13	ENSGT00730000110915.b #14	ENSGT00900000141090.t #15	ENSGT00550000074968 #16	ENSGT00940000166160.ab #17	ENSGT00390000016421.b.a #18	ENSGT00510000046499.r.b	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f #22	ENSGT00390000012496.a.d #23	ENSGT00940000164480.a.a #24	ENSGT00940000156563.b	ENSGT01090000260051.b.b.dc.b	ENSGT00390000001447.ec	ENSGT00940000155177.b	ENSGT00940000155177.a	ENSGT00940000163715.a	ENSGT01030000235037	ENSGT00990000204171	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a	ENSGT00940000153421.a.a.a.a.b	ENSGT00390000016722	ENSGT00940000165059.A
Salmoninae	ANCESTRAL SPECIES	146	ENSGT00940000157784.c.c.c ##8	ENSGT00940000164822.db.b	ENSGT01050000244864.D.s.a #9	ENSGT01050000244864.C.e.e #12	ENSGT00940000158408.l #13	ENSGT00730000110915.b.d.a #14	ENSGT00900000141090.t.sb.a #15	ENSGT00550000074968.j #16	ENSGT00940000166160.ab.b #17	ENSGT00940000166160.`b #17	ENSGT00390000016421.b.a.f #18	ENSGT00510000046499.r.b	ENSGT00390000015060.kb.a.a #19	ENSGT00940000161679.a.f #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f.g #22	ENSGT00390000012496.a.d.a #23	ENSGT00940000164480.a.a.h.b #24	ENSGT00940000159150.`b.a	ENSGT00940000156563.b.ab	ENSGT01090000260051.b.b.dc.b.h	ENSGT00390000001447.ec.a.a	ENSGT00940000155177.b.e	ENSGT00940000155177.a.l	ENSGT00940000163715.a	ENSGT01030000235037.d	ENSGT00440000033720.a.a.a.b	ENSGT00940000153421.a.a.a.a.b.m	ENSGT00390000016722.f	ENSGT00940000165059.A.i.a.a	ENSGT00390000016713.g.a
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000157784.c.c.c ##8	ENSGT00940000164822.db.b	ENSGT01050000244864.D.s.a #9	ENSGT01050000244864.C.e.e #12	ENSGT00940000158408.l #13	ENSGT00730000110915.b.d.a #14	ENSGT00900000141090.t.sb.a #15	ENSGT00940000177223.a	ENSGT00550000074968.j #16	ENSGT00940000166160.ab.b #17	ENSGT00390000016421.b.a.f #18	ENSGT00510000046499.r.b	ENSGT00390000015060.kb.a.a #19	ENSGT00940000161679.a.f #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f.g #22	ENSGT00390000012496.a.d.a #23	ENSGT00940000164480.a.a.h.b #24	ENSGT00940000156563.b.ab	ENSGT01090000260051.b.b.dc.b.h	ENSGT00390000001447.ec.a.a	ENSGT00940000155177.b.e	ENSGT00940000155177.a.l	ENSGT00940000163715.a	ENSGT01030000235037.d	ENSGT00440000033720.a.a.a.b	ENSGT00940000153421.a.a.a.a.b.m	ENSGT00390000016722.f	ENSGT00940000165059.A.i.a.a	ENSGT00390000016713.g.a	ENSGT00390000009885
Salmo	ANCESTRAL SPECIES	10	ENSGT00940000156556.g.h ##7	ENSGT00940000157784.c.c.c ##8	ENSGT00940000164822.db.b	ENSGT01050000244864.D.s.a #9	ENSGT01050000244864.C.e.e #12	ENSGT00940000158408.l #13	ENSGT00730000110915.b.d.a #14	ENSGT00900000141090.t.sb.a #15	ENSGT00550000074968.j #16	ENSGT00940000166160.ab.b #17	ENSGT00390000016421.b.a.f #18	ENSGT00990000214232	ENSGT00390000015060.kb.a.a #19	ENSGT00940000161679.a.f #20	ENSGT00940000154497.B #21	ENSGT00390000019377.b.f.g #22	ENSGT00390000012496.a.d.a #23	ENSGT00940000164480.a.a.h.b #24	ENSGT00940000159150.`b.a	ENSGT01090000260051.b.b.dc.b.h	ENSGT00390000001447.ec.a.a	ENSGT00940000155177.b.e	ENSGT00940000155177.a.l	ENSGT00940000163715.a	ENSGT01030000235037.d	ENSGT00440000033720.a.a.a.b	ENSGT00940000153421.a.a.a.a.b.m	ENSGT00390000016722.f	ENSGT00940000165059.A.i.a.a	ENSGT00390000016713.g.a	ENSGT00390000009885
Atlantic salmon	MODERN SPECIES	13	ENSSSAG00000042427	ENSSSAG00000086573	ENSSSAG00000093353	gja8a (ENSSSAG00000042447) #9	gja5a (ENSSSAG00000042461) #12	ppa6 (ENSSSAG00000042468) #13	BCL9 (ENSSSAG00000042529) #14	ENSSSAG00000042541 #15	chaf1b (ENSSSAG00000042565) #16	morc3a (ENSSSAG00000092286) #17	DOP1B (ENSSSAG00000042986) #18	ENSSSAG00000043759	atp5po (ENSSSAG00000043976) #19	SLC5A3 (ENSSSAG00000098423) #20	KCNE2 (ENSSSAG00000088761) #21	casq2 (ENSSSAG00000103020) #22	vangl1 (ENSSSAG00000044373) #23	nhlh2 (ENSSSAG00000044432) #24	ENSSSAG00000054834	ackr3a (ENSSSAG00000088471)	rpe (ENSSSAG00000044897)	ENSSSAG00000044924	ENSSSAG00000047817	klhl6 (ENSSSAG00000047892)	ENSSSAG00000047907	ANOS1 (ENSSSAG00000047935)	tbl1x (ENSSSAG00000048037)	GPR143 (ENSSSAG00000048302)	ENSSSAG00000048376	mospd2 (ENSSSAG00000048416)	ENSSSAG00000048852
River trout	MODERN SPECIES	12	fstl1b (ENSSTUG00000008997) ##8	ENSSTUG00000008971	ENSSTUG00000008939	gja8a (ENSSTUG00000008930) #9	gja5a (ENSSTUG00000008924) #12	acp6 (ENSSTUG00000008881) #13	BCL9 (ENSSTUG00000008851) #14	ENSSTUG00000008839	chaf1b (ENSSTUG00000008809) #16	ENSSTUG00000008794 #17	DOP1B (ENSSTUG00000008450) #18	ENSSTUG00000008355	atp5po (ENSSTUG00000008290) #19	SLC5A3 (ENSSTUG00000008284) #20	KCNE2 (ENSSTUG00000008281) #21	casq2 (ENSSTUG00000008199) #22	vangl1 (ENSSTUG00000008184) #23	nhlh2 (ENSSTUG00000008174) #24	NQO1 (ENSSTUG00000007984)	ackr3a (ENSSTUG00000007974)	ENSSTUG00000007960	igsf3 (ENSSTUG00000007941)	ENSSTUG00000007927	klhl6 (ENSSTUG00000007918)	ENSSTUG00000007876	ANOS1 (ENSSTUG00000007800)	tbl1x (ENSSTUG00000007698)	GPR143 (ENSSTUG00000007687)	ENSSTUG00000007673	mospd2 (ENSSTUG00000007058)	ENSSTUG00000007030
Oncorhynchus	ANCESTRAL SPECIES	13	ENSGT00940000156556.g.h ##7	ENSGT00940000157784.c.c.c ##8	ENSGT00940000164822.db.b	ENSGT01050000244864.D.s.a #9	ENSGT01050000244864.C.e.e #12	ENSGT00940000158408.l #13	ENSGT00730000110915.b.d.a #14	ENSGT00940000177223.a	ENSGT00550000074968.j #16	ENSGT00940000166160.ab.b #17	ENSGT00390000016421.b.a.f #18	ENSGT00510000046499.r.b	ENSGT00390000015060.kb.a.a #19	ENSGT00940000161679.a.f #20	ENSGT00940000154497.B.i #21	ENSGT00390000019377.b.f.g #22	ENSGT00390000012496.a.d.a #23	ENSGT00940000164480.a.a.h.b #24	ENSGT00940000156563.b.ab	ENSGT01090000260051.b.b.dc.b.h	ENSGT00390000001447.ec.a.a	ENSGT00940000155177.b.e	ENSGT00940000155177.a.l	ENSGT00940000163715.a	ENSGT01030000235037.d	ENSGT00440000033720.a.a.a.b	ENSGT00940000153421.a.a.a.a.b.m	ENSGT00390000016722.f	ENSGT00940000165059.A.i.a.a	ENSGT00390000016713.g.a	ENSGT00390000009885
Oncorhynchus_a	ANCESTRAL SPECIES	11	ENSGT00940000156556.g.h ##7	ENSGT00940000157784.c.c.c ##8	ENSGT00940000164822.db.b	ENSGT01050000244864.D.s.a #9	ENSGT01050000244864.C.e.e #12	ENSGT00940000158408.l #13	ENSGT00730000110915.b.d.a #14	ENSGT00940000177223.a	ENSGT00550000074968.j #16	ENSGT00940000166160.ab.b #17	ENSGT00390000016421.b.a.f #18	ENSGT00510000046499.r.b	ENSGT00390000015060.kb.a.a #19	ENSGT00940000161679.a.f #20	ENSGT00940000154497.B.i #21	ENSGT00390000019377.b.f.g #22	ENSGT00390000012496.a.d.a #23	ENSGT00940000164480.a.a.h.b #24	ENSGT00940000156563.b.ab	ENSGT01090000260051.b.b.dc.b.h	ENSGT00390000001447.ec.a.a	ENSGT00940000155177.b.e	ENSGT00940000155177.a.l	ENSGT00940000163715.a	ENSGT01030000235037.d	ENSGT00440000033720.a.a.a.b	ENSGT00940000153421.a.a.a.a.b.m	ENSGT00390000016722.f	ENSGT00940000165059.A.i.a.a	ENSGT00390000016713.g.a	ENSGT00390000009885
Coho salmon	MODERN SPECIES	18	LRRC58 (ENSOKIG00005013099) ##7	FSTL1 (ENSOKIG00005013133) ##8	ENSOKIG00005013483	ENSOKIG00005013493	gja8a (ENSOKIG00005013498) #9	gja5a (ENSOKIG00005013507) #12	acp6 (ENSOKIG00005013517) #13	BCL9 (ENSOKIG00005013563) #14	ENSOKIG00005013605	chaf1b (ENSOKIG00005013623) #16	atp5po (ENSOKIG00005013670) #19	DOP1B (ENSOKIG00005013707) #18	CBR1 (ENSOKIG00005013774)	SLC5A3 (ENSOKIG00005013802) #20	KCNE2 (ENSOKIG00005013805) #21	casq2 (ENSOKIG00005013820) #22	vangl1 (ENSOKIG00005013938) #23	nhlh2 (ENSOKIG00005013944) #24	ENSOKIG00005013949	ackr3a (ENSOKIG00005013979)	rpe (ENSOKIG00005013983)	igsf3 (ENSOKIG00005014013)	ENSOKIG00005014027	klhl6 (ENSOKIG00005014065)	ENSOKIG00005014107	ANOS1 (ENSOKIG00005014133)	tbl1x (ENSOKIG00005014218)	GPR143 (ENSOKIG00005014324)	ENSOKIG00005014334	mospd2 (ENSOKIG00005014378)	ENSOKIG00005015526
Chinook salmon	MODERN SPECIES	18	GPR156 (ENSOTSG00005013459)	LRRC58 (ENSOTSG00005013461) ##7	fstl1b (ENSOTSG00005013465) ##8	ENSOTSG00005013600	gja8a (ENSOTSG00005013601) #9	gja5a (ENSOTSG00005013602) #12	acp6 (ENSOTSG00005013603) #13	BCL9 (ENSOTSG00005013604) #14	ENSOTSG00005013605	chaf1b (ENSOTSG00005013607) #16	ENSOTSG00005013613 #17	DOP1B (ENSOTSG00005013614) #18	atp5po (ENSOTSG00005003000) #19	SLC5A3 (ENSOTSG00005003006) #20	KCNE2 (ENSOTSG00005003008) #21	casq2 (ENSOTSG00005003019) #22	vangl1 (ENSOTSG00005004770) #23	nhlh2 (ENSOTSG00005004773) #24	ENSOTSG00005004774	ackr3a (ENSOTSG00005004775)	rpe (ENSOTSG00005004777)	igsf3 (ENSOTSG00005004780)	klhl6 (ENSOTSG00005004782)	ENSOTSG00005004797	ANOS1 (ENSOTSG00005004801)	tbl1x (ENSOTSG00005004863)	GPR143 (ENSOTSG00005005592)	ENSOTSG00005005595	mospd2 (ENSOTSG00005005600)	ENSOTSG00005005606	glra2 (ENSOTSG00005005607)
Rainbow trout	MODERN SPECIES	14	ENSOMYG00000060787	LRRC58 (ENSOMYG00000017372) ##7	fstl1b (ENSOMYG00000017433) ##8	ENSOMYG00000018307	gja8a (ENSOMYG00000018326) #9	gja5a (ENSOMYG00000018337) #12	acp6 (ENSOMYG00000018343) #13	BCL9 (ENSOMYG00000018417) #14	ENSOMYG00000018426 #15	chaf1b (ENSOMYG00000018441) #16	ENSOMYG00000059586 #17	ENSOMYG00000066976	atp5po (ENSOMYG00000018540) #19	SLC5A3 (ENSOMYG00000018592) #20	KCNE2 (ENSOMYG00000018596) #21	casq2 (ENSOMYG00000018660) #22	ENSOMYG00000036126	vangl1 (ENSOMYG00000018862) #23	nhlh2 (ENSOMYG00000018870) #24	ENSOMYG00000018898	ackr3a (ENSOMYG00000019032)	rpe (ENSOMYG00000019037)	ENSOMYG00000019048	ENSOMYG00000076143	ENSOMYG00000019091	ENSOMYG00000019134	ANOS1 (ENSOMYG00000019180)	tbl1x (ENSOMYG00000019289)	GPR143 (ENSOMYG00000019343)	ENSOMYG00000019349	mospd2 (ENSOMYG00000019450)
Huchen	MODERN SPECIES	592	ENSHHUG00000032957	gja8a (ENSHHUG00000032974) #9	gja5a (ENSHHUG00000032979) #12	acp6 (ENSHHUG00000032987) #13	BCL9 (ENSHHUG00000033001) #14	ENSHHUG00000033005 #15	chaf1b (ENSHHUG00000033017) #16	ENSHHUG00000033030 #17	ENSHHUG00000033039 #17	ENSHHUG00000033036 #17	DOP1B (ENSHHUG00000033053) #18	CBR1 (ENSHHUG00000033071)	atp5po (ENSHHUG00000033191) #19	SLC5A3 (ENSHHUG00000033262) #20	KCNE2 (ENSHHUG00000033269) #21	casq2 (ENSHHUG00000033272) #22	vangl1 (ENSHHUG00000033288) #23	ENSHHUG00000033294	nhlh2 (ENSHHUG00000033297) #24	NQO1 (ENSHHUG00000033302)
Salmoninae	ANCESTRAL SPECIES	370	ENSGT00940000164822.db.a	ENSGT00940000175300	ENSGT01050000244864.D.s.b #9	ENSGT01050000244864.C.e.f #12	ENSGT00940000158408.k #13	ENSGT00730000110915.b.d.b #14	ENSGT00900000141090.t.sb.b #15	ENSGT00940000157543.gb	ENSGT00550000074968.i #16	ENSGT00940000166160.ab.a #17	ENSGT00390000016421.b.a.e #18	ENSGT00940000168097.a	ENSGT00390000015060.kb.a.b #19	ENSGT00940000161679.a.e #20	ENSGT00980000202612	ENSGT00390000019377.b.f.h #22	ENSGT00390000012496.a.d.b #23
Salmoninae_a	ANCESTRAL SPECIES		ENSGT00940000164822.db.a.c	ENSGT00940000175300	ENSGT00940000164822.db.a.d	ENSGT01050000244864.D.s.b #9	ENSGT01050000244864.C.e.f #12	ENSGT00940000158408.k.a #13	ENSGT00730000110915.b.d.b #14	ENSGT00900000141090.t.sb.b #15	ENSGT00550000074968.i #16	ENSGT00940000166160.ab.a #17	ENSGT00390000016421.b.a.e #18	ENSGT00940000168097.a	ENSGT00390000015060.kb.a.b #19	ENSGT00940000161679.a.e #20	ENSGT00980000202612	ENSGT00390000019377.b.f.h #22	ENSGT00390000012496.a.d.b #23	ENSGT00940000164480.a.a.h.a #24	ENSGT01030000234567.B.a.a.b.a.a.d	ENSGT00940000156563.b.`b.a	ENSGT01090000260051.b.b.dc.b.g	ENSGT00390000001447.ec.a.b	ENSGT00940000155177.b.f.a.a	ENSGT00940000155177.a.k	ENSGT01030000235037.c	ENSGT00990000204171	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a.a	ENSGT00940000153421.a.a.a.a.b.n	ENSGT00390000016722.e	ENSGT00940000165059.A.i.a.b
Salmo	ANCESTRAL SPECIES	15	ENSGT00940000175300	ENSGT00940000164822.db.a.c	ENSGT01050000244864.D.s.b #9	ENSGT01050000244864.C.e.f #12	ENSGT00940000158408.k.a #13	ENSGT00730000110915.b.d.b #14	ENSGT00900000141090.t.sb.b #15	ENSGT00940000157543.gb	ENSGT00550000074968.i #16	ENSGT00940000166160.ab.a #17	ENSGT00390000016421.b.a.e #18	ENSGT00940000168097.a	ENSGT00390000015060.kb.a.b #19	ENSGT00940000161679.a.e #20	ENSGT00980000202612	ENSGT00390000019377.b.f.h #22	ENSGT00390000012496.a.d.b #23	ENSGT00940000164480.a.a.h.a #24	ENSGT01030000234567.B.a.a.b.a.a.d	ENSGT00940000156563.b.`b.a	ENSGT01090000260051.b.b.dc.b.g	ENSGT00390000001447.ec.a.b	ENSGT00390000001447.ec.b	ENSGT00940000155177.b.f.b	ENSGT00940000155177.a.k	ENSGT01030000235037.c	ENSGT00990000204171	ENSGT00440000033720.a.a.a.a	ENSGT00940000153421.a.a.a.a.b.n	ENSGT00390000016722.e	ENSGT00940000165059.A.i.a.b
River trout	MODERN SPECIES	16	ENSSTUG00000007902	ENSSTUG00000007885	ENSSTUG00000007843	gja8a (ENSSTUG00000007818) #9	gja5a (ENSSTUG00000007814) #12	acp6 (ENSSTUG00000007757) #13	BCL9 (ENSSTUG00000007749) #14	ENSSTUG00000007736	chaf1b (ENSSTUG00000007711) #16	morc3a (ENSSTUG00000007695) #17	DOP1B (ENSSTUG00000007601) #18	ENSSTUG00000007585	atp5po (ENSSTUG00000007560) #19	SLC5A3 (ENSSTUG00000007555) #20	ENSSTUG00000007549	casq2 (ENSSTUG00000007253) #22	vangl1 (ENSSTUG00000007230) #23	nhlh2 (ENSSTUG00000007225) #24	zp3e (ENSSTUG00000007221)	ENSSTUG00000007158	ENSSTUG00000007146	ENSSTUG00000006999	ackr3a (ENSSTUG00000006992)	rpe (ENSSTUG00000006974)	igsf3 (ENSSTUG00000006933)	ENSSTUG00000006923	ENSSTUG00000006882	ENSSTUG00000006877	ENSSTUG00000006847	ANOS1 (ENSSTUG00000006773)	tbl1x (ENSSTUG00000006744)
Atlantic salmon	MODERN SPECIES	17	ENSSSAG00000104928	ENSSSAG00000063155	ENSSSAG00000104164	ENSSSAG00000063201	gja8a (ENSSSAG00000063143) #9	gja5a (ENSSSAG00000119255) #12	acp6 (ENSSSAG00000063120) #13	BCL9 (ENSSSAG00000063108) #14	ENSSSAG00000063093 #15	ENSSSAG00000063057 #17	ENSSSAG00000059772 #18	ENSSSAG00000059598	ATPO (ENSSSAG00000059523) #19	ENSSSAG00000094002 #20	ENSSSAG00000059503	casq2 (ENSSSAG00000054929) #22	vangl1 (ENSSSAG00000054869) #23	nhlh2 (ENSSSAG00000109106) #24	ENSSSAG00000054838	ENSSSAG00000044445	ENSSSAG00000054829	rpe (ENSSSAG00000054825)	ENSSSAG00000054813	ENSSSAG00000054804	ENSSSAG00000054799	ENSSSAG00000054780	ANOS1 (ENSSSAG00000054698)	tbl1x (ENSSSAG00000053978)	GPR143 (ENSSSAG00000053806)	mospd2 (ENSSSAG00000068014)	glra2 (ENSSSAG00000067987)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000156556.g.g ##7	ENSGT00940000157784.c.c.d ##8	ENSGT00940000164822.db.a.c	ENSGT00940000164822.db.a.d	ENSGT01050000244864.D.s.b #9	ENSGT01050000244864.C.e.f #12	ENSGT00940000158408.k.a #13	ENSGT00730000110915.b.d.b #14	ENSGT00900000141090.t.sb.b #15	ENSGT00550000074968.i #16	ENSGT00940000166160.ab.a #17	ENSGT00390000016421.b.a.e #18	ENSGT00940000168097.a.a	ENSGT00390000015060.kb.a.b #19	ENSGT00940000161679.a.e #20	ENSGT00390000019377.b.f.h #22	ENSGT00390000012496.a.d.b #23	ENSGT00940000164480.a.a.h.a #24	ENSGT01030000234567.B.a.a.b.a.a.d	ENSGT01090000260051.b.b.dc.b.g	ENSGT00390000001447.ec.a.b	ENSGT00940000155177.b.f.a.a	ENSGT00940000155177.a.k	ENSGT01030000235037.c	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a.a	ENSGT00940000153421.a.a.a.a.b.n	ENSGT00390000016722.e	ENSGT00940000165059.A.i.a.b	ENSGT00390000016713.g.b.a	ENSGT00940000158730.k
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000157784.c.c.d ##8	ENSGT00940000164822.db.a.c	ENSGT00940000164822.db.a.d	ENSGT01050000244864.D.s.b #9	ENSGT01050000244864.C.e.f #12	ENSGT00940000158408.k.a #13	ENSGT00730000110915.b.d.b #14	ENSGT00900000141090.t.sb.b #15	ENSGT00550000074968.i #16	ENSGT00940000166160.ab.a #17	ENSGT00390000016421.b.a.e #18	ENSGT00940000168097.a.a	ENSGT00390000015060.kb.a.b #19	ENSGT00940000161679.a.e #20	ENSGT00940000154497.B.j #21	ENSGT00390000019377.b.f.h #22	ENSGT00390000012496.a.d.b #23	ENSGT00940000164480.a.a.h.a #24	ENSGT01030000234567.B.a.a.b.a.a.d	ENSGT01090000260051.b.b.dc.b.g	ENSGT00390000001447.ec.a.b	ENSGT00940000155177.b.f.a.a	ENSGT00940000155177.a.k	ENSGT01030000235037.c	ENSGT01030000234540.A.b	ENSGT00440000033720.a.a.a.a	ENSGT00940000153421.a.a.a.a.b.n	ENSGT00390000016722.e	ENSGT00940000165059.A.i.a.b	ENSGT00390000016713.g.b.a	ENSGT00940000158730.k
Chinook salmon	MODERN SPECIES	22	nr1i2 (ENSOTSG00005000476)	ENSOTSG00005000474	ENSOTSG00005000475	gja8a (ENSOTSG00005000472) #9	gja5a (ENSOTSG00005000470) #12	acp6 (ENSOTSG00005000468) #13	BCL9 (ENSOTSG00005000465) #14	ENSOTSG00005000464 #15	chaf1b (ENSOTSG00005000462) #16	morc3a (ENSOTSG00005000460) #17	DOP1B (ENSOTSG00005000456) #18	ENSOTSG00005000455	atp5po (ENSOTSG00005000453) #19	SLC5A3 (ENSOTSG00005000452) #20	KCNE2 (ENSOTSG00005000451) #21	casq2 (ENSOTSG00005000448) #22	vangl1 (ENSOTSG00005000446) #23	nhlh2 (ENSOTSG00005000445) #24	zp3e (ENSOTSG00005000444)	ackr3a (ENSOTSG00005000442)	rpe (ENSOTSG00005000441)	ENSOTSG00005000440	ENSOTSG00005000439	ENSOTSG00005000431	ENSOTSG00005000423	ENSOTSG00005000415	ENSOTSG00005000413	man1a2 (ENSOTSG00005000407)	tent5c (ENSOTSG00005000395)	gdap2 (ENSOTSG00005000389)	ENSOTSG00005000387
Coho salmon	MODERN SPECIES	11	fstl1b (ENSOKIG00005027149) ##8	ENSOKIG00005003184	ENSOKIG00005003158	gja8a (ENSOKIG00005003143) #9	gja5a (ENSOKIG00005003140) #12	acp6 (ENSOKIG00005003128) #13	BCL9 (ENSOKIG00005003117) #14	ENSOKIG00005003113	chaf1b (ENSOKIG00005003095) #16	morc3a (ENSOKIG00005003070) #17	DOP1B (ENSOKIG00005002981) #18	ENSOKIG00005002939	atp5po (ENSOKIG00005002927) #19	SLC5A3 (ENSOKIG00005002922) #20	KCNE2 (ENSOKIG00005002916) #21	casq2 (ENSOKIG00005002871) #22	vangl1 (ENSOKIG00005002850) #23	nhlh2 (ENSOKIG00005002843) #24	ENSOKIG00005002834	ackr3a (ENSOKIG00005002827)	rpe (ENSOKIG00005002820)	IGSF3 (ENSOKIG00005002805)	ENSOKIG00005002781	ENSOKIG00005002758	ENSOKIG00005002750	ENSOKIG00005002745	ANOS1 (ENSOKIG00005002713)	tbl1x (ENSOKIG00005002621)	GPR143 (ENSOKIG00005002594)	ENSOKIG00005002582	mospd2 (ENSOKIG00005002553)
Rainbow trout	MODERN SPECIES	21	ENSOMYG00000051119	gja8a (ENSOMYG00000014482) #9	gja5a (ENSOMYG00000049227) #12	acp6 (ENSOMYG00000014462) #13	ENSOMYG00000056441	ENSOMYG00000066437	BCL9 (ENSOMYG00000014454) #14	ENSOMYG00000063437	ENSOMYG00000014447	chaf1b (ENSOMYG00000014428) #16	morc3a (ENSOMYG00000049261) #17	DOP1B (ENSOMYG00000014336) #18	ENSOMYG00000014299	atp5po (ENSOMYG00000014271) #19	ENSOMYG00000014265 #20	casq2 (ENSOMYG00000014149) #22	vangl1 (ENSOMYG00000014112) #23	ENSOMYG00000067696	nhlh2 (ENSOMYG00000014105) #24	ENSOMYG00000014098	ENSOMYG00000014093	ENSOMYG00000014083	ENSOMYG00000060193	ENSOMYG00000014060	ENSOMYG00000068621	ENSOMYG00000014034	ENSOMYG00000014018	ENSOMYG00000050527	ENSOMYG00000054735	ANOS1 (ENSOMYG00000013940)	ENSOMYG00000014176
Huchen	MODERN SPECIES	1850							ENSHHUG00000003817	ENSHHUG00000003846	chaf1b (ENSHHUG00000003850) #16	morc3a (ENSHHUG00000003859) #17	ENSHHUG00000003868	DOP1B (ENSHHUG00000003870) #18	ENSHHUG00000003877	atp5po (ENSHHUG00000003884) #19	SLC5A3 (ENSHHUG00000003985) #20	casq2 (ENSHHUG00000004065) #22	vangl1 (ENSHHUG00000004192) #23
Northern pike	MODERN SPECIES	15	LRRC58 (ENSELUG00000004704) ##7	fstl1b (ENSELUG00000004714) ##8	ENSELUG00000004834	ENSELUG00000026943	ENSELUG00000004812	gja8a (ENSELUG00000004848) #9	gja5a (ENSELUG00000004857) #12	acp6 (ENSELUG00000004869) #13	BCL9 (ENSELUG00000004887) #14	ENSELUG00000004908 #15	chaf1b (ENSELUG00000001542) #16	ENSELUG00000004944 #17	atp5po (ENSELUG00000005034) #19	SLC5A3 (ENSELUG00000005045) #20	KCNE2 (ENSELUG00000005049) #21	casq2 (ENSELUG00000005069) #22	vangl1 (ENSELUG00000005092) #23	nhlh2 (ENSELUG00000005100) #24	NQO1 (ENSELUG00000027214)	ENSELUG00000033016	ENSELUG00000032602	zp3a.2 (ENSELUG00000005122)	ENSELUG00000026962	NQO1 (ENSELUG00000005112)	NQO1 (ENSELUG00000005135)	ENSELUG00000030777	NQO1 (ENSELUG00000034029)	ackr3a (ENSELUG00000005199)	rpe (ENSELUG00000005213)	igsf3 (ENSELUG00000005232)	ENSELUG00000030995
Clupeocephala	ANCESTRAL SPECIES	432													ENSGT00390000013817	ENSGT00940000158283	ENSGT00940000172275	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178
Otomorpha	ANCESTRAL SPECIES	417												ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00940000172275	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01090000260082.d.a.b	ENSGT00940000159316	ENSGT01090000259985.b.a.a.b.f
Otophysi	ANCESTRAL SPECIES	353												ENSGT00390000011708.a	ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01090000260082.d.a.b
Characiphysae	ANCESTRAL SPECIES	154	ENSGT00390000008490	ENSGT00940000156445.p	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a	ENSGT00390000013608	ENSGT00390000006915.c.c.a	ENSGT00940000158619.p	ENSGT00940000162067	ENSGT01060000249008.a	ENSGT00550000074981	ENSGT00390000011708.a	ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00940000166972.q.b #29	ENSGT01090000260082.d.a.b
Channel catfish	MODERN SPECIES	18	hsf2bp (ENSIPUG00000013890)	ENSIPUG00000013895	cryaa (ENSIPUG00000013900)	CBS (ENSIPUG00000013909)	u2af1 (ENSIPUG00000013962)	gemin8 (ENSIPUG00000013983)	Gpm6b (ENSIPUG00000014001)	rab9a (ENSIPUG00000014035)	tceanc (ENSIPUG00000014053)	ENSIPUG00000014055	pwp2h (ENSIPUG00000014074)	zgc:64002 (ENSIPUG00000014154)	zgc:172295 (ENSIPUG00000014171)	timmdc1 (ENSIPUG00000014286)	poglut1 (ENSIPUG00000014348)	ENSIPUG00000014396 ##22	vangl1 (ENSIPUG00000014436) ##23	Nhlh1 (ENSIPUG00000014462) ##24	ENSIPUG00000014473	hpxb (ENSIPUG00000014483) #29	ENSIPUG00000014559	ENSIPUG00000014830	ENSIPUG00000014851	ENSIPUG00000014868	tsga10 (ENSIPUG00000014880)	slk (ENSIPUG00000014943)	zp3c (ENSIPUG00000014959)	zp3c (ENSIPUG00000014983)	zp3c (ENSIPUG00000015025)	ENSIPUG00000015043	CALHM1 (ENSIPUG00000015057)
Characiphysae_b	ANCESTRAL SPECIES	45	ENSGT00390000008490	ENSGT00940000156445.p	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a	ENSGT00390000013608	ENSGT00390000006915.c.c.a	ENSGT00940000158619.p	ENSGT00940000162067	ENSGT01060000249008.a	ENSGT00550000074981	ENSGT00390000011708.a	ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00940000166972.q.b #29	ENSGT01090000260082.d.a.b	ENSGT01090000259985.b.a.a.b.f	ENSGT00940000163031.b.a.a	ENSGT00940000159205	ENSGT00940000156184.a	ENSGT00980000198902.a	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b
Characoidei	ANCESTRAL SPECIES	42	ENSGT00390000008490	ENSGT00940000156445.p	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a	ENSGT00390000013608	ENSGT00390000006915.c.c.a	ENSGT00940000158619.p	ENSGT00940000162067	ENSGT01060000249008.a	ENSGT00550000074981	ENSGT00390000011708.a	ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00940000163999.a.r.b.b	ENSGT00940000163999.a.r.b.a	ENSGT01090000260082.d.a.b	ENSGT01090000259985.b.a.a.b.f
Red-bellied piranha	MODERN SPECIES	163	HSF2BP (ENSPNAG00000003514)	ENSPNAG00000018212	cryaa (ENSPNAG00000003511)	cbsa (ENSPNAG00000005487)	ENSPNAG00000018109	gemin8 (ENSPNAG00000017992)	gpm6ba (ENSPNAG00000017975)	RAB9A (ENSPNAG00000017938)	TCEANC (ENSPNAG00000017908)	ENSPNAG00000017891	pwp2h (ENSPNAG00000017876)	zgc:64002 (ENSPNAG00000017834)	zgc:172295 (ENSPNAG00000017825)	timmdc1 (ENSPNAG00000017764)	poglut1 (ENSPNAG00000017750)	ENSPNAG00000017743 ##22	VANGL1 (ENSPNAG00000017709) ##23	ENSPNAG00000017692 ##24	ENSPNAG00000017677	ENSPNAG00000017668	ENSPNAG00000017622 #29	ENSPNAG00000017597	ENSPNAG00000017592	ENSPNAG00000017570	ENSPNAG00000017562	ENSPNAG00000017483	ENSPNAG00000017459	tsga10 (ENSPNAG00000017442)	ENSPNAG00000017393	slkb (ENSPNAG00000017378)	ENSPNAG00000017318
Mexicana tetra	MODERN SPECIES	3	lig4 (ENSAMXG00000008192)	NALF1 (ENSAMXG00000039067)	ENSAMXG00000038840	cckbra (ENSAMXG00000008203)	ENSAMXG00000031145	ENSAMXG00000035162	ENSAMXG00000030058	MAP4K4 (ENSAMXG00000005146)	ENSAMXG00000005176	chst10 (ENSAMXG00000033225)	ENSAMXG00000029524	zgc:64002 (ENSAMXG00000043311)	zgc:172295 (ENSAMXG00000005230)	timmdc1 (ENSAMXG00000043134)	poglut1 (ENSAMXG00000040520)	CASQ2 (ENSAMXG00000038552) ##22	VANGL1 (ENSAMXG00000005275) ##23	ENSAMXG00000026006 ##24	ENSAMXG00000037151 ##27	ENSAMXG00000005283 #29	ENSAMXG00000026007	ENSAMXG00000026008	ENSAMXG00000033746	ENSAMXG00000033179	ENSAMXG00000029398	ENSAMXG00000005320	ENSAMXG00000005333	ENSAMXG00000043665	tsga10 (ENSAMXG00000005345)	slkb (ENSAMXG00000005356)	ENSAMXG00000031571
Electric eel	MODERN SPECIES	228															ENSEEEG00000021608	CASQ2 (ENSEEEG00000021604) ##22	VANGL1 (ENSEEEG00000021602) ##23	ENSEEEG00000021601 ##24	ENSEEEG00000021600	ENSEEEG00000021586	ENSEEEG00000021439 #29	RDX (ENSEEEG00000019891)	ENSEEEG00000019835	ENSEEEG00000019833	ENSEEEG00000019831	ddx39aa (ENSEEEG00000019812)	EVI5L (ENSEEEG00000019811)	ENSEEEG00000019810	ENSEEEG00000019809	emp1 (ENSEEEG00000019808)	f8a (ENSEEEG00000019789)
Cyprinoidei	ANCESTRAL SPECIES	22	ENSGT00390000008490	ENSGT00940000154989	ENSGT00940000160159	ENSGT00510000047027.c.a	ENSGT00950000183152.B.c.a	ENSGT00390000013608	ENSGT00390000006915.c.c.a	ENSGT00940000158619.p	ENSGT00940000162067	ENSGT00980000198599	ENSGT00550000074981	ENSGT00390000011708.a	ENSGT01000000214434.B.a.a.a	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01090000260082.d.a.b
Cyprininae	ANCESTRAL SPECIES	524	ENSGT00940000156564.b.a	ENSGT00390000008490.c	ENSGT00940000160159.j	ENSGT00510000047027.c.a.d	ENSGT00950000183152.B.c.a.f	ENSGT00390000013608	ENSGT00390000006915.c.c.a.c	ENSGT00940000158619.p.d.b	ENSGT00940000162067	ENSGT00980000198599.e.b	ENSGT00550000074981.e	ENSGT00390000011708.a.o	ENSGT01000000214434.B.a.a.a.a	ENSGT00390000013817.a.b	ENSGT00940000158283.h	ENSGT00390000019377.b.e.a ##22
Goldfish	MODERN SPECIES		ankrd10a (ENSCARG00000000298)	cryaa (ENSCARG00000000303)	cbsa (ENSCARG00000000472)	ENSCARG00000000805	U2AF1 (ENSCARG00000000812)	gemin8 (ENSCARG00000000815)	gpm6ba (ENSCARG00000000824)	ENSCARG00000000838	RAB9A (ENSCARG00000000840)	ENSCARG00000000843	pwp2h (ENSCARG00000000863)	zgc:64002 (ENSCARG00000000891)	zgc:172295 (ENSCARG00000000940)	timmdc1 (ENSCARG00000001048)	poglut1 (ENSCARG00000001052)	ENSCARG00000001063 ##22	VANGL1 (ENSCARG00000001076) ##23	helt (ENSCARG00000001080)	acsl1a (ENSCARG00000001116)	casp3a (ENSCARG00000001182)	fat1a (ENSCARG00000001286)	B4GALT1 (ENSCARG00000001767)	stra6l (ENSCARG00000001773)	tdrd7a (ENSCARG00000001819)	TMOD1 (ENSCARG00000001897)	cplx2l (ENSCARG00000001908)	gne (ENSCARG00000002070)	nansa (ENSCARG00000002655)	clta (ENSCARG00000002666)	SCLT1 (ENSCARG00000002712)	ENSCARG00000002729
Cyprininae_a	ANCESTRAL SPECIES	409	ENSGT00940000156564.b.a	ENSGT00390000008490.c	ENSGT00940000160159.j	ENSGT00510000047027.c.a.d	ENSGT00950000183152.B.c.a.f	ENSGT00390000013608	ENSGT00390000006915.c.c.a.c	ENSGT00940000158619.p.d.b	ENSGT00940000162067.f	ENSGT00980000198599.e.b	ENSGT00550000074981.e	ENSGT00390000011708.a.o	ENSGT01000000214434.B.a.a.a.a	ENSGT00390000013817.a.b	ENSGT00940000158283.h	ENSGT00390000019377.b.e.a ##22	ENSGT00940000164480.a.b.b ##24	ENSGT00980000198666
Common carp reference	MODERN SPECIES	22	ankrd10a (ENSCCRG00000077064)	ENSCCRG00000040344	cryaa (ENSCCRG00000012965)	cbsa (ENSCCRG00000012967)	ENSCCRG00000036609	gemin8 (ENSCCRG00000036604)	gpm6ba (ENSCCRG00000062658)	ENSCCRG00000074214	ENSCCRG00000036582	ENSCCRG00000061673	ENSCCRG00000035917	ENSCCRG00000035945	zgc:172295 (ENSCCRG00000066794)	ENSCCRG00000035914	poglut1 (ENSCCRG00000057234)	ENSCCRG00000034967 ##22	ENSCCRG00000068901	ENSCCRG00000068845 ##24	ENSCCRG00000039798	ENSCCRG00000072518	ENSCCRG00000059538	ENSCCRG00000024724	ENSCCRG00000063228	ENSCCRG00000039673	ENSCCRG00000082660	ENSCCRG00000063311	ENSCCRG00000075744	ENSCCRG00000049719	ENSCCRG00000040866	ENSCCRG00000059685	ENSCCRG00000068564
Golden-line barbel	MODERN SPECIES	447	ENSSGRG00000031393	irs2a (ENSSGRG00000031394)	RAB20 (ENSSGRG00000031395)	CARS2 (ENSSGRG00000031399)	ING1 (ENSSGRG00000031666)	ENSSGRG00000031669	ankrd10a (ENSSGRG00000031773)	ENSSGRG00000031774	cryaa (ENSSGRG00000031776)	gpm6ba (ENSSGRG00000031779)	RAB9A (ENSSGRG00000031783)	pwp2h (ENSSGRG00000031790)	ENSSGRG00000031795	zgc:172295 (ENSSGRG00000031867)	poglut1 (ENSSGRG00000033286)	ENSSGRG00000033288 ##22	poglut1 (ENSSGRG00000033345)	VANGL1 (ENSSGRG00000033346) ##23	ENSSGRG00000033348 ##24	ENSSGRG00000033349	ENSSGRG00000033351	ENSSGRG00000033354	ENSSGRG00000033355
Cyprininae	ANCESTRAL SPECIES	666										ENSGT00980000198599.e.a	ENSGT00550000074981.f	ENSGT00390000011708.a.p	ENSGT01000000214434.B.a.a.a.b	ENSGT00390000013817.a.a	ENSGT00940000158283.g	ENSGT00390000019377.b.e.b ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01090000260082.d.a.b.s.a	ENSGT00940000159316.v.a
Goldfish	MODERN SPECIES	18	CARS2 (ENSCARG00000028507)	ENSCARG00000028455	ankrd10a (ENSCARG00000028437)	HSF2BP (ENSCARG00000028417)	ENSCARG00000028364	cryaa (ENSCARG00000028356)	cbsa (ENSCARG00000028121)	ENSCARG00000027899	gemin8 (ENSCARG00000027879)	gpm6ba (ENSCARG00000027843)	ENSCARG00000027833	ENSCARG00000027823	zgc:172295 (ENSCARG00000027063)	timmdc1 (ENSCARG00000026968)	poglut1 (ENSCARG00000025791)	ENSCARG00000025633 ##22	ENSCARG00000025612	VANGL1 (ENSCARG00000025599) ##23	ENSCARG00000025588 ##24	ENSCARG00000025583	ENSCARG00000025572	ENSCARG00000023777	ENSCARG00000023705	ENSCARG00000023700	ENSCARG00000023695	ENSCARG00000023662	ENSCARG00000022473	knstrn (ENSCARG00000022346)	SDK1 (ENSCARG00000021957)	ENSCARG00000021867	ENSCARG00000021863
Cyprininae_a	ANCESTRAL SPECIES	461							ENSGT00940000158619.p.d.a	ENSGT00390000006915.c.c.a.d	ENSGT00940000162067.e	ENSGT00980000198599.e.a	ENSGT00550000074981.f	ENSGT00390000011708.a.p	ENSGT01000000214434.B.a.a.a.b	ENSGT00390000013817.a.a	ENSGT00940000158283.g	ENSGT00390000019377.b.e.b ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b.a ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01090000260082.d.a.b.s.a	ENSGT00940000159316.v.a	ENSGT00940000155063.c.b.b	ENSGT00440000033329.b.a.a.a
Common carp reference	MODERN SPECIES	27	HSF2BP (ENSCCRG00000039784)	ENSCCRG00000061857	cryaa (ENSCCRG00000031413)	cbsa (ENSCCRG00000074701)	ENSCCRG00000039764	gemin8 (ENSCCRG00000039757)	gpm6ba (ENSCCRG00000058543)	ENSCCRG00000036614	ENSCCRG00000079225	ENSCCRG00000034956	pwp2h (ENSCCRG00000034888)	ENSCCRG00000032237	zgc:172295 (ENSCCRG00000060184)	ENSCCRG00000035141	poglut1 (ENSCCRG00000034984)	ENSCCRG00000034681 ##22	ENSCCRG00000034427 ##23	ENSCCRG00000082187 ##24	ENSCCRG00000070647 ##27	ENSCCRG00000024283	ENSCCRG00000070025	ENSCCRG00000043337	ENSCCRG00000079166	ENSCCRG00000039653	ENSCCRG00000081028	PSIP1 (ENSCCRG00000062862)	bnc2 (ENSCCRG00000056219)	CNTLN (ENSCCRG00000071812)	sh3gl2a (ENSCCRG00000018054)	ENSCCRG00000018048	ENSCCRG00000018046
Golden-line barbel	MODERN SPECIES	107	ankrd10a (ENSSGRG00000049274)	HSF2BP (ENSSGRG00000049275)	ENSSGRG00000049276	cryaa (ENSSGRG00000049277)	cbsa (ENSSGRG00000049297)	ENSSGRG00000049662	gpm6ba (ENSSGRG00000049663)	RAB9A (ENSSGRG00000049664)	RAB9A (ENSSGRG00000049666)	ENSSGRG00000049668	ENSSGRG00000049670	pwp2h (ENSSGRG00000049672)	zgc:172295 (ENSSGRG00000049683)	timmdc1 (ENSSGRG00000049684)	poglut1 (ENSSGRG00000049685)	ENSSGRG00000049932 ##22	ENSSGRG00000049933 ##23	ENSSGRG00000049935 ##24	ENSSGRG00000049936	ENSSGRG00000049937	ENSSGRG00000050058	ENSSGRG00000051584	ENSSGRG00000051662
Clupeiformes	ANCESTRAL SPECIES	802															ENSGT00940000158283	ENSGT00390000019377.b.e ##22
Atlantic herring	MODERN SPECIES	13	ATP7B (ENSCHAG00000019567)	ENSCHAG00000021521	ENSCHAG00000021530	ENSCHAG00000021535	ENSCHAG00000021551	ENSCHAG00000021565	ENSCHAG00000021586	ENSCHAG00000021591	mrpl16 (ENSCHAG00000021607)	si:ch73-41e3.7 (ENSCHAG00000021615)	txnl4b (ENSCHAG00000021624)	trmt10c (ENSCHAG00000021644)	blzf1 (ENSCHAG00000021652)	ENSCHAG00000021658	poglut1 (ENSCHAG00000021677)	CASQ2 (ENSCHAG00000022236) ##22	wdsub1 (ENSCHAG00000022337)	ENSCHAG00000022470	ENSCHAG00000024544	ENSCHAG00000025852	stab2 (ENSCHAG00000025890)	ENSCHAG00000026154	zgc:112416 (ENSCHAG00000026168)	ENSCHAG00000026171	ENSCHAG00000026172	GULP1 (ENSCHAG00000026179)	ENSCHAG00000026210	zswim2 (ENSCHAG00000026482)	FAM171B (ENSCHAG00000026487)	LRRC3 (ENSCHAG00000026489)	ENSCHAG00000026494
Denticle herring	MODERN SPECIES	15	ENSDCDG00000018500	RBM26 (ENSDCDG00000018525)	marchf4l (ENSDCDG00000018599)	pcca (ENSDCDG00000018854)	zic2b (ENSDCDG00000023192)	tm9sf2 (ENSDCDG00000023211)	ubac2 (ENSDCDG00000023907)	gpr183b (ENSDCDG00000023910)	dachc (ENSDCDG00000023911)	mzt1 (ENSDCDG00000023916)	bora (ENSDCDG00000023918)	DIS3 (ENSDCDG00000023923)	ENSDCDG00000024024	timmdc1 (ENSDCDG00000024099)	poglut1 (ENSDCDG00000024106)	ENSDCDG00000024119 ##22	ENSDCDG00000024367	brap (ENSDCDG00000024397)	tor4aa (ENSDCDG00000024574)	zgc:56235 (ENSDCDG00000024578)	slc25a1b (ENSDCDG00000024619)	pi4kaa (ENSDCDG00000024634)	hic2 (ENSDCDG00000024951)	ube2l3a (ENSDCDG00000024955)	ckmt2a (ENSDCDG00000024960)	RASGRF2 (ENSDCDG00000024986)	ANKRD34B (ENSDCDG00000025160)	ENSDCDG00000000406	MARVELD2 (ENSDCDG00000000584)	oclna (ENSDCDG00000000589)	ERAP1 (ENSDCDG00000000612)
Euteleosteomorpha	ANCESTRAL SPECIES	124	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT01090000260278	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000160898	ENSGT00940000158655.e	ENSGT00940000160749.b	ENSGT00940000155232.t.a.b.b	ENSGT00940000156862	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT00940000155107.b.a	ENSGT00940000155063.a.b
Protacanthopterygii	ANCESTRAL SPECIES	27	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b	ENSGT00940000156862	ENSGT00390000013817	ENSGT00940000158283	ENSGT00980000198666	ENSGT00390000009178	ENSGT00940000172275	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000163999.a.c.b.b	ENSGT00940000161095	ENSGT00940000163999.a.c.a.b	ENSGT01090000260082.d.a.b.q.a	ENSGT00940000155107.b.a	ENSGT00940000155063.a.b	ENSGT00440000033329.b.a.a.c	ENSGT00390000014839.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a	ENSGT00950000182895.a.b.v.k	ENSGT00510000047718.c	ENSGT00940000157267
Salmoninae	ANCESTRAL SPECIES	308	ENSGT00940000157564.g.b	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000012496.a.c.b ##23	ENSGT00940000164480.a.a.g.a.a.b #24	ENSGT00940000164480.a.a.g.a.a.a #24	ENSGT00940000164246.C.d.b.b ##27	ENSGT00390000009178	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000159316.yb.b.b	ENSGT00940000163999.a.c.a.b.a.a.a	ENSGT00940000163999.a.c.a.b.a.b	ENSGT01090000260082.d.a.b.q.a.a	ENSGT00940000155107.b.a	ENSGT00940000155063.a.b	ENSGT00440000033329.b.a.a.c.a	ENSGT00390000014839.b.e
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00940000178412.a.b.a.b	ENSGT00940000157564.h	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000012496.a.c.b ##23	ENSGT00940000164480.a.a.g.a.a.b #24	ENSGT00940000164480.a.a.g.a.a.a #24	ENSGT00940000164246.C.d.b.b ##27	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00940000176997	ENSGT00390000014839.b.f.b	ENSGT00940000164909.e.b	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a.b
Salmo	ANCESTRAL SPECIES	48	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a.c	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00940000153931.b.b.f.a.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000012496.a.c.a.a ##23	ENSGT00940000164246.C.d.b.a ##27	ENSGT00390000009178.h	ENSGT00940000163999.a.c.a.b.a.a.b	ENSGT00940000163999.a.c.a.b.a.a.a	ENSGT00940000163999.a.c.a.b.a.b	ENSGT01090000260082.d.a.b.q.a.a	ENSGT00940000155063.a.b.d	ENSGT00440000033329.b.a.a.c.a	ENSGT00390000014839.b.f.b.a	ENSGT00940000164909.e.b.l	ENSGT00390000004977.d.b.e	ENSGT00950000182895.a.b.v.j.a.b	ENSGT00510000047718.c	ENSGT00940000157267.a
River trout	MODERN SPECIES	36	ENSSTUG00000044324	atp5f1b (ENSSTUG00000044353)	ENSSTUG00000044490	klhl41b (ENSSTUG00000044644)	OXGR1 (ENSSTUG00000044659)	ENSSTUG00000044661	dzip1 (ENSSTUG00000044676)	ENSSTUG00000044766	ENSSTUG00000044805	cldn10a (ENSSTUG00000044812)	abcc4 (ENSSTUG00000044947)	abcc4 (ENSSTUG00000047816)	abcc4 (ENSSTUG00000049552)	timmdc1 (ENSSTUG00000049944)	poglut1 (ENSSTUG00000049946)	ENSSTUG00000049952 ##22	VANGL1 (ENSSTUG00000049968) ##23	ENSSTUG00000049972 #24	ENSSTUG00000049974 ##27	ENSSTUG00000049977	tlr22 (ENSSTUG00000049980)	tlr22 (ENSSTUG00000049983)	tlr22 (ENSSTUG00000049985)	ENSSTUG00000049993	ENSSTUG00000050054	ENSSTUG00000050230	atg9a (ENSSTUG00000050237)	ENSSTUG00000050258	ENSSTUG00000050304	ENSSTUG00000050311	TSPEAR (ENSSTUG00000050325)
Atlantic salmon	MODERN SPECIES	7	ENSSSAG00000041657	ENSSSAG00000041864	ENSSSAG00000041914	ENSSSAG00000088957	dzip1 (ENSSSAG00000041925)	ENSSSAG00000041941	ENSSSAG00000041967	cldn10a (ENSSSAG00000107218)	abcc4 (ENSSSAG00000042175)	ENSSSAG00000044835	ENSSSAG00000092235	ENSSSAG00000053987	ENSSSAG00000105015	cc001 (ENSSSAG00000066134)	poglut1 (ENSSSAG00000066149)	casq1 (ENSSSAG00000066333) ##22	ENSSSAG00000006259 ##23	ENSSSAG00000114461 #24	ENSSSAG00000066492 ##27	ENSSSAG00000066499	ENSSSAG00000066645	ENSSSAG00000017255	ENSSSAG00000094502	ENSSSAG00000066641	ENSSSAG00000088381	ENSSSAG00000066649	ENSSSAG00000066692	ENSSSAG00000067494	ENSSSAG00000114816	ENSSSAG00000078382	ENSSSAG00000078456
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000157564.g.b	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a.e	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000019377.b.e.d.a.b ##22	ENSGT00390000012496.a.c.b.b.b ##23	ENSGT00940000164480.a.a.g.a.a.a #24	ENSGT00940000164246.C.d.b.b ##27	ENSGT00980000198666	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b.e	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00390000014839.b.f.b	ENSGT00940000164909.e.b.i	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a.b
Rainbow trout	MODERN SPECIES	9	ENSOMYG00000021052	ENSOMYG00000020921	ENSOMYG00000020874	ENSOMYG00000050148	ENSOMYG00000020869	ENSOMYG00000020861	ENSOMYG00000071918	dzip1 (ENSOMYG00000020831)	ENSOMYG00000020777	ENSOMYG00000020759	cldn10a (ENSOMYG00000020750)	abcc4 (ENSOMYG00000020308)	ENSOMYG00000016730	ENSOMYG00000016590	ENSOMYG00000016525	ENSOMYG00000016209 ##22	ENSOMYG00000016168 ##23	ENSOMYG00000016165 #24	ENSOMYG00000016163 ##27	ENSOMYG00000057949	ENSOMYG00000054440	ENSOMYG00000075427	ENSOMYG00000049322	ENSOMYG00000016156	ENSOMYG00000015966	ENSOMYG00000032300	ENSOMYG00000032093	ENSOMYG00000032074	ENSOMYG00000032031	ENSOMYG00000031982	ENSOMYG00000031943
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00940000178412.a.b.a.b	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a.e	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000019377.b.e.d.a.a ##22	ENSGT00390000012496.a.c.b.b.b ##23	ENSGT00940000164480.a.a.g.b #24	ENSGT00980000198666	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b.e	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00940000176997	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a.b	ENSGT00940000157267.b	ENSGT00730000110871.a.a.a.b
Coho salmon	MODERN SPECIES	7	ENSOKIG00005029805	ATP5F1B (ENSOKIG00005029829)	ENSOKIG00005029969	KLHL41 (ENSOKIG00005004261)	OXGR1 (ENSOKIG00005004334)	ENSOKIG00005004339	dzip1 (ENSOKIG00005004375)	ENSOKIG00005004438	ENSOKIG00005004541	cldn10a (ENSOKIG00005004565)	abcc4 (ENSOKIG00005004763)	ABCC4 (ENSOKIG00005007877)	ENSOKIG00005012466	timmdc1 (ENSOKIG00005012469)	poglut1 (ENSOKIG00005012497)	ENSOKIG00005012776 ##22	ENSOKIG00005013223 ##23	ENSOKIG00005013239 #24	ENSOKIG00005013258	tlr22 (ENSOKIG00005013441)	ENSOKIG00005013447	ENSOKIG00005013454	ENSOKIG00005013460	ENSOKIG00005013465	ENSOKIG00005013499	ENSOKIG00005013915	ENSOKIG00005016118	ENSOKIG00005016124	ENSOKIG00005016200	ENSOKIG00005016937	ATG9A (ENSOKIG00005016974)
Huchen	MODERN SPECIES	172	ENSHHUG00000028622	atp5f1b (ENSHHUG00000028639)	ENSHHUG00000028808	klhl41b (ENSHHUG00000028841)	ENSHHUG00000028873	OXGR1 (ENSHHUG00000028876)	ENSHHUG00000028877	dzip1 (ENSHHUG00000028878)	ENSHHUG00000028894	ENSHHUG00000028901	cldn10a (ENSHHUG00000028906)	abcc4 (ENSHHUG00000028932)	abcc4 (ENSHHUG00000029338)	timmdc1 (ENSHHUG00000029362)	poglut1 (ENSHHUG00000029368)	ENSHHUG00000029378 ##22	ENSHHUG00000029469 ##23	ENSHHUG00000029487 #24	ENSHHUG00000029488 ##27	ENSHHUG00000029490	tlr22 (ENSHHUG00000029722)	tlr22 (ENSHHUG00000029731)	tlr22 (ENSHHUG00000029734)	tlr22 (ENSHHUG00000029801)	ENSHHUG00000029809	ENSHHUG00000029936	MAP4K4 (ENSHHUG00000029955)	ENSHHUG00000030883	atg9a (ENSHHUG00000030907)	ENSHHUG00000030916
Salmoninae	ANCESTRAL SPECIES																	ENSGT00390000019377.b.e.d.a.a ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00390000019377.b.e.d.a.a ##22
Oncorhynchus	ANCESTRAL SPECIES	43	ENSGT00940000158665.d.g	ENSGT00550000074800.a.b.c	ENSGT00940000163195.B.a.d	ENSGT00940000158859.f.c	ENSGT00940000177271.e	ENSGT01030000234621.F.c.e	ENSGT00950000183071.a.a.a.e.b.e	ENSGT00940000156862.w	ENSGT00940000155232.t.a.b.b.i	ENSGT00940000166422.b	ENSGT00940000155232.t.b.a.f	ENSGT00940000153931.b.b.e.b	ENSGT00940000153931.b.b.f.a.a	ENSGT01010000229608	ENSGT00940000172275	ENSGT00390000019377.b.e.d.a.a ##22	ENSGT00390000012496.a.c.b.a ##23	ENSGT00940000164480.a.a.g.b #24
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a.e	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000019377.b.e.d.a.a ##22	ENSGT00390000012496.a.c.b.b.b ##23	ENSGT00940000164480.a.a.g.b #24	ENSGT00980000198666	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b.e	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00940000176997	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a.b	ENSGT00940000157267.b	ENSGT00730000110871.a.a.a.b	ENSGT00940000155489.a.c.b
Coho salmon	MODERN SPECIES	25	atp5f1b (ENSOKIG00005040541)	ENSOKIG00005040276	ENSOKIG00005040207	ENSOKIG00005040191	klhl41b (ENSOKIG00005040138)	OXGR1 (ENSOKIG00005040121)	HS6ST3 (ENSOKIG00005040106)	ENSOKIG00005040074	dzip1 (ENSOKIG00005040046)	ENSOKIG00005040006	cldn10a (ENSOKIG00005039996)	abcc4 (ENSOKIG00005036908)	ABCC4 (ENSOKIG00005036027)	ENSOKIG00005035989	POGLUT1 (ENSOKIG00005035758)	ENSOKIG00005035436 ##22	VANGL1 (ENSOKIG00005035379) ##23	ENSOKIG00005035364 #24	ENSOKIG00005035334	ENSOKIG00005034452	ENSOKIG00005033685	ENSOKIG00005033595	ENSOKIG00005031728	ENSOKIG00005031604	atg9a (ENSOKIG00005031492)	ENSOKIG00005031464	ENSOKIG00005031163	ENSOKIG00005031101	ENSOKIG00005031012	ENSOKIG00005030481	ENSOKIG00005030068
Chinook salmon	MODERN SPECIES	31	ENSOTSG00005041022	ENSOTSG00005041021	ENSOTSG00005041020	ENSOTSG00005041019	uggt1 (ENSOTSG00005040996)	OXGR1 (ENSOTSG00005040994)	ENSOTSG00005040993	dzip1 (ENSOTSG00005040992)	ENSOTSG00005040991	ENSOTSG00005040990	cldn10a (ENSOTSG00005040988)	abcc4 (ENSOTSG00005032005)	abcc4 (ENSOTSG00005029906)	ENSOTSG00005029896	ENSOTSG00005029895	ENSOTSG00005029410 ##22	ENSOTSG00005029403 ##23	ENSOTSG00005029402 #24	ENSOTSG00005029401	ENSOTSG00005028925	ENSOTSG00005025917	ENSOTSG00005025912	ENSOTSG00005024793	ENSOTSG00005024787	atg9a (ENSOTSG00005024738)	ENSOTSG00005024736	NRDC (ENSOTSG00005024162)	ENSOTSG00005024151	ENSOTSG00005024150	CARTPT (ENSOTSG00005024148)	ENSOTSG00005024147
Salmoninae	ANCESTRAL SPECIES																	ENSGT00390000019377.b.e.d.a.b ##22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00390000019377.b.e.d.a.b ##22
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000158665.d.h	ENSGT00550000074800.a.b.d	ENSGT00940000163195.B.a.c	ENSGT00940000158859.f.d	ENSGT01030000234621.F.c.f	ENSGT00950000183071.a.a.a.e.b.f	ENSGT00940000156862.x	ENSGT00940000155232.t.a.b.b.j	ENSGT00940000166422.a	ENSGT00940000155232.t.b.a.e	ENSGT00940000153931.b.b.e.a	ENSGT00940000153931.b.b.f.b	ENSGT00390000013817.d	ENSGT00940000158283	ENSGT00390000019377.b.e.c ##22	ENSGT00390000019377.b.e.d.a.b ##22	ENSGT00390000012496.a.c.b.b.b ##23	ENSGT00940000164480.a.a.g.a.a.a #24	ENSGT00940000164246.C.d.b.b ##27	ENSGT00980000198666	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b.e	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00390000014839.b.f.b	ENSGT00940000164909.e.b.i	ENSGT00390000004977.d.b	ENSGT00950000182895.a.b.v.j.a.b	ENSGT00940000157267.b
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000039891	ENSOMYG00000039853	ENSOMYG00000039848	ENSOMYG00000039868	ENSOMYG00000039846	ENSOMYG00000039840	dzip1 (ENSOMYG00000039832)	ENSOMYG00000039825	ENSOMYG00000039815	cldn10a (ENSOMYG00000056385)	ENSOMYG00000052190	abcc4 (ENSOMYG00000038670)	ENSOMYG00000036403	ENSOMYG00000068793	ENSOMYG00000035916	ENSOMYG00000035252 ##22	ENSOMYG00000035142 ##23	ENSOMYG00000057623 #24	ENSOMYG00000035136 ##27	ENSOMYG00000033385	ENSOMYG00000031214	ENSOMYG00000030884	ENSOMYG00000030736	ENSOMYG00000030561	ENSOMYG00000030271	ENSOMYG00000055704	ENSOMYG00000077588	ENSOMYG00000030155	ENSOMYG00000030120	ENSOMYG00000029816	ENSOMYG00000007792
Oncorhynchus_a	ANCESTRAL SPECIES	86																ENSGT00390000019377.b.e.d.a.b ##22	ENSGT00390000012496.a.c.b.b.a ##23	ENSGT00940000164480.a.a.g.a.a.b #24	ENSGT00390000009178.h	ENSGT00940000163999.a.c.a.b.a.a.b	ENSGT00940000163999.a.c.a.b.a.b.e.a	ENSGT00940000163999.a.c.a.b.a.b.f	ENSGT01090000260082.d.a.b.q.a.a	ENSGT00940000155107.b.a.e	ENSGT00940000155063.a.b.f	ENSGT00440000033329.b.a.a.c.a	ENSGT00390000014839.b.f.b	ENSGT00940000164909.e.b.i	ENSGT00950000182895.a.b.v.j.a.a	ENSGT00510000047718.c	ENSGT00940000157267.a
Chinook salmon	MODERN SPECIES	5	B3GALT1 (ENSOTSG00005011448)	ENSOTSG00005036006	ENSOTSG00005036005	atp5f1b (ENSOTSG00005035950)	ENSOTSG00005035944	klhl41b (ENSOTSG00005035940)	OXGR1 (ENSOTSG00005035939)	ENSOTSG00005035937	dzip1 (ENSOTSG00005035933)	ENSOTSG00005035928	ENSOTSG00005035925	abcc4 (ENSOTSG00005027263)	abcc4 (ENSOTSG00005026793)	timmdc1 (ENSOTSG00005026791)	poglut1 (ENSOTSG00005026614)	ENSOTSG00005026612 ##22	VANGL1 (ENSOTSG00005026610) ##23	ENSOTSG00005026609 #29	ENSOTSG00005026608	ENSOTSG00005026607	tlr22 (ENSOTSG00005026606)	ENSOTSG00005023952	ENSOTSG00005023916	ENSOTSG00005022693	ENSOTSG00005022691	ENSOTSG00005022655	ENSOTSG00005022654	rassf6 (ENSOTSG00005022652)	ENSOTSG00005022651	ENSOTSG00005022650	ENSOTSG00005022649
Huchen	MODERN SPECIES	186	ENSHHUG00000024252	atp5f1b (ENSHHUG00000024265)	ENSHHUG00000024406	klhl41b (ENSHHUG00000024420)	OXGR1 (ENSHHUG00000024425)	ENSHHUG00000024426	dzip1 (ENSHHUG00000024441)	ENSHHUG00000024454	ENSHHUG00000024461	ENSHHUG00000024468	abcc4 (ENSHHUG00000024486)	psen1 (ENSHHUG00000025010)	abcc4 (ENSHHUG00000025036)	timmdc1 (ENSHHUG00000026156)	poglut1 (ENSHHUG00000026162)	ENSHHUG00000026172 ##22	VANGL1 (ENSHHUG00000026222) ##23	ENSHHUG00000026233 #24	ENSHHUG00000026235	ENSHHUG00000026247	ENSHHUG00000026476	ENSHHUG00000026493	ENSHHUG00000027223	atg9a (ENSHHUG00000027230)	ENSHHUG00000027254
Salmoninae	ANCESTRAL SPECIES	298	ENSGT00940000157564.g.a	ENSGT00940000158665.d.g	ENSGT00550000074800.a.b.c	ENSGT00940000163195.B.a.d	ENSGT00940000158859.f.c	ENSGT01030000234621.F.c.e	ENSGT00950000183071.a.a.a.e.b.e	ENSGT00940000156862.w	ENSGT00940000155232.t.a.b.b.i	ENSGT00940000166422.b	ENSGT00940000155232.t.b.b.c	ENSGT00940000153931.b.b.e.b	ENSGT00940000153931.b.b.f.a.a	ENSGT00390000013817.c	ENSGT00940000172275	ENSGT00390000019377.b.e.d.b ##22	ENSGT00390000012496.a.c.a.b ##23	ENSGT00940000164480.a.a.g.b #24
Salmoninae_a	ANCESTRAL SPECIES	97	ENSGT00940000157564.g.a	ENSGT00940000158665.d.g	ENSGT00550000074800.a.b.c	ENSGT00940000163195.B.a.d	ENSGT00940000158859.f.c	ENSGT01030000234621.F.c.e	ENSGT00950000183071.a.a.a.e.b.e	ENSGT00940000156862.w	ENSGT00940000155232.t.a.b.b.i	ENSGT00940000166422.b	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.e.b	ENSGT00940000153931.b.b.f.a.a	ENSGT00390000013817.c	ENSGT00940000172275	ENSGT00390000019377.b.e.d.b ##22	ENSGT00390000012496.a.c.a.b ##23	ENSGT00940000164480.a.a.g.b #24
Salmo	ANCESTRAL SPECIES	41	ENSGT00940000157564.g.a	ENSGT00940000158665.d.g	ENSGT00550000074800.a.b.c	ENSGT00940000163195.B.a.d	ENSGT00940000158859.f.c	ENSGT01030000234621.F.c.e	ENSGT00950000183071.a.a.a.e.b.e	ENSGT00940000156862.w	ENSGT00940000155232.t.a.b.b.i	ENSGT00940000166422.b	ENSGT00940000155232.t.b.a.d	ENSGT00940000153931.b.b.e.b	ENSGT00940000153931.b.b.f.a.a	ENSGT00390000013817.c	ENSGT00940000172275	ENSGT00390000019377.b.e.d.b ##22	ENSGT00390000012496.a.c.b ##23	ENSGT00940000164480.a.a.g.a.b #24	ENSGT00980000198666	ENSGT00390000009178.g	ENSGT01090000260082.d.a.b.q.a.b	ENSGT00940000155107.b.a.f	ENSGT00940000155063.a.b.c	ENSGT00440000033329.b.a.a.c.b	ENSGT00390000014839.b.f.a	ENSGT00940000164909.e.b.k	ENSGT00390000004977.d.b.f	ENSGT00950000182895.a.b.v.j.a.a	ENSGT00950000182895.a.a.a.b	ENSGT00940000164904.a.g.b.a	ENSGT00540000073890.q.a
River trout	MODERN SPECIES	32	DHRS9 (ENSSTUG00000049551)	atp5f1b (ENSSTUG00000049519)	ENSSTUG00000049432	klhl41b (ENSSTUG00000049420)	OXGR1 (ENSSTUG00000049418)	ENSSTUG00000049417	dzip1 (ENSSTUG00000049385)	ENSSTUG00000049381	ENSSTUG00000049380	cldn10a (ENSSTUG00000049365)	abcc4 (ENSSTUG00000048570)	ENSSTUG00000048420	abcc4 (ENSSTUG00000047308)	ENSSTUG00000047234	ENSSTUG00000047226	ENSSTUG00000047139 ##22	ENSSTUG00000047123 ##23	ENSSTUG00000047116 #24	ENSSTUG00000047113	ENSSTUG00000046743	ENSSTUG00000046228	ENSSTUG00000046182	ENSSTUG00000045384	ENSSTUG00000045341	atg9a (ENSSTUG00000045300)	ENSSTUG00000044215	ENSSTUG00000044174	ENSSTUG00000044153	ENSSTUG00000043758	ENSSTUG00000043721	TRA2B (ENSSTUG00000043611)
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000081525	ENSSSAG00000110514	ENSSSAG00000081540	ENSSSAG00000081541	ENSSSAG00000090645	ENSSSAG00000081542	dzip1 (ENSSSAG00000081543)	ENSSSAG00000081544	ENSSSAG00000081545	cldn10a (ENSSSAG00000115005)	abcc4 (ENSSSAG00000081593)	ENSSSAG00000081627	ENSSSAG00000091740	ENSSSAG00000005996	ENSSSAG00000006024	ENSSSAG00000006094 ##22	ENSSSAG00000066489 ##23	ENSSSAG00000088817 #24	ENSSSAG00000006277 ##27	ENSSSAG00000006327	ENSSSAG00000006617	ENSSSAG00000007990	ENSSSAG00000008597	ENSSSAG00000078373	ENSSSAG00000072544	ENSSSAG00000072552	ENSSSAG00000072622	ENSSSAG00000072718	ENSSSAG00000072729	ENSSSAG00000072814	ENSSSAG00000072819
Northern pike	MODERN SPECIES	21	ENSELUG00000008611	gna11b (ENSELUG00000008649)	TLE5 (ENSELUG00000028407)	PLPP2 (ENSELUG00000025589)	theg (ENSELUG00000027610)	shda (ENSELUG00000008738)	yju2 (ENSELUG00000008776)	ebi3 (ENSELUG00000008819)	odf3l2a (ENSELUG00000008837)	crlf1a (ENSELUG00000008880)	keap1a (ENSELUG00000008917)	SSBP4 (ENSELUG00000008998)	ENSELUG00000009064	ENSELUG00000009037	poglut1 (ENSELUG00000009087)	ENSELUG00000009144 ##22	VANGL1 (ENSELUG00000009195) ##23	ENSELUG00000009208 #24	ENSELUG00000009243	tlr22 (ENSELUG00000009256)	ENSELUG00000009290	ENSELUG00000009319	MAP4K4 (ENSELUG00000009520)	ENSELUG00000009573	atg9a (ENSELUG00000009602)	ENSELUG00000009709	ENSELUG00000001518	TSPEAR (ENSELUG00000009812)	ENSELUG00000009935	ENSELUG00000009974	ENSELUG00000010433
Acanthomorphata	ANCESTRAL SPECIES	85	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00980000198666	ENSGT00390000009178	ENSGT01090000260082.d.a.b.o.a	ENSGT00940000155107.b.a	ENSGT00940000155063.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	36	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01090000260082.d.a.b.o.a	ENSGT00940000155107.b.a	ENSGT00940000155063.a.b	ENSGT00940000157128	ENSGT00950000183030	ENSGT00730000111163	ENSGT00940000159160	ENSGT00550000075118.k	ENSGT00390000009001	ENSGT00940000156552.c.b	ENSGT00530000063873.A
Percomorphaceae	ANCESTRAL SPECIES	22	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Percomorphaceae_B	ANCESTRAL SPECIES	22	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Ovalentaria	ANCESTRAL SPECIES	23	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT01090000260278	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Atherinomorphae	ANCESTRAL SPECIES	24	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT00390000018436.b.m.a	ENSGT00800000125246	ENSGT01050000244902.b.c.a.a
Cyprinodontiformes	ANCESTRAL SPECIES	25	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
Aplocheiloidei	ANCESTRAL SPECIES	92	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Mangrove rivulus	MODERN SPECIES	184	B3GALT1 (ENSKMAG00000004490)	ABCB11 (ENSKMAG00000004525)	ENSKMAG00000004670	atp5f1b (ENSKMAG00000004690)	ENSKMAG00000004751	klhl41b (ENSKMAG00000004793)	oxgr1a.2 (ENSKMAG00000004806)	ENSKMAG00000004824	dzip1 (ENSKMAG00000004842)	CLDN10 (ENSKMAG00000004899)	ENSKMAG00000004923	abcc4 (ENSKMAG00000004954)	abcc4 (ENSKMAG00000005042)	ENSKMAG00000005069	poglut1 (ENSKMAG00000005082)	ENSKMAG00000005113 ##22	VANGL1 (ENSKMAG00000005153) ##23	ENSKMAG00000005184 ##24	ENSKMAG00000005247	GJA3 (ENSKMAG00000005549) ##9
Turquoise killifish	MODERN SPECIES	1615	GABRA5 (ENSNFUG00015001546)	ENSNFUG00015001557	ENSNFUG00015001559	STEAP3 (ENSNFUG00015001564)	C1QL2 (ENSNFUG00015001569)	EN1 (ENSNFUG00015001573)	ENSNFUG00015001581	ENSNFUG00015001593	ENSNFUG00015001602	XKR6 (ENSNFUG00015001613)	enpp4 (ENSNFUG00015001618)	clic5a (ENSNFUG00015001627)	MGAT5 (ENSNFUG00015001636)	TMEM163 (ENSNFUG00015001645)	timmdc1 (ENSNFUG00015001651)	ENSNFUG00015001679 ##22	POGLUT1 (ENSNFUG00015001713)	VANGL1 (ENSNFUG00015001726) ##23	NHLH2 (ENSNFUG00015001736) ##24	ENSNFUG00015001738 ##27	HPX (ENSNFUG00015001761)	ENSNFUG00015001828	GJA3 (ENSNFUG00015001837) ##9	ENSNFUG00015001872	SAP18 (ENSNFUG00015001902)	rtraf (ENSNFUG00015001919)	NID2 (ENSNFUG00015001959)	ENSNFUG00015002066	ENSNFUG00015002071	ptger2a (ENSNFUG00015002076)	GPR137C (ENSNFUG00015002079)
Cyprinodontoidei	ANCESTRAL SPECIES	26	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
NAME_4	ANCESTRAL SPECIES	60	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
Mummichog	MODERN SPECIES	2355	DHRS9 (ENSFHEG00000013611)	atp5f1b (ENSFHEG00000000914)	ENSFHEG00000013669	klhl41b (ENSFHEG00000013690)	oxgr1a.2 (ENSFHEG00000013705)	ENSFHEG00000013714	dzip1 (ENSFHEG00000013855)	ENSFHEG00000013885	ENSFHEG00000013916	cldn10a (ENSFHEG00000013935)	ENSFHEG00000013949	abcc4 (ENSFHEG00000014180)	abcc4 (ENSFHEG00000014346)	timmdc1 (ENSFHEG00000014368)	poglut1 (ENSFHEG00000014402)	ENSFHEG00000014433 ##22	VANGL1 (ENSFHEG00000014464) ##23	ENSFHEG00000014482 ##24	ENSFHEG00000014497	ENSFHEG00000014504	GJA3 (ENSFHEG00000014544) ##9	ENSFHEG00000014572	ENSFHEG00000014593	sap18 (ENSFHEG00000014614)	rtraf (ENSFHEG00000014652)	ENSFHEG00000014673	ENSFHEG00000014839	ENSFHEG00000014882
Sheepshead minnow	MODERN SPECIES	121	ENSCVAG00000008938	atp5f1b (ENSCVAG00000008929)	ENSCVAG00000008896	klhl41b (ENSCVAG00000008884)	oxgr1a.2 (ENSCVAG00000008852)	ENSCVAG00000008842	DZIP1 (ENSCVAG00000000247)	CLDN10 (ENSCVAG00000008794)	ENSCVAG00000008749	ENSCVAG00000008659	cldn10a (ENSCVAG00000008615)	abcc4 (ENSCVAG00000008600)	abcc4 (ENSCVAG00000008504)	timmdc1 (ENSCVAG00000008359)	poglut1 (ENSCVAG00000008340)	CASQ2 (ENSCVAG00000008326) ##22	VANGL1 (ENSCVAG00000008288) ##23	ENSCVAG00000008210	ENSCVAG00000008204 ##24	ENSCVAG00000008192 ##24	ENSCVAG00000008184 ##27	ENSCVAG00000008181	ENSCVAG00000000888 ##9	ENSCVAG00000008144	sap18 (ENSCVAG00000000990)	rtraf (ENSCVAG00000008112)	NID2 (ENSCVAG00000008077)	ENSCVAG00000007991	ptger2a (ENSCVAG00000007975)	ENSCVAG00000007967	gpr137c (ENSCVAG00000007947)
Poeciliinae	ANCESTRAL SPECIES	23	ENSGT00940000161625.m	ENSGT00940000165423.a.b	ENSGT00610000086518.b.a.h.b	ENSGT00610000086518.b.a.h.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00390000010543.v	ENSGT00940000155318.b.b	ENSGT00390000010543.u	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT00940000177331	ENSGT00800000125246	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080
Poecilia	ANCESTRAL SPECIES	30	ENSGT00940000161625.m	ENSGT00940000165423.a.b	ENSGT00610000086518.b.a.h.b	ENSGT00610000086518.b.a.h.a	ENSGT01030000234635.a.b.a.b.a	ENSGT00940000155318.b.b	ENSGT00390000010543.v	ENSGT00390000010543.u	ENSGT00940000156365	ENSGT00940000157860	ENSGT00390000000292.B	ENSGT00390000013073	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
NAME_6	ANCESTRAL SPECIES	410											ENSGT00390000000292.B	ENSGT00390000013073	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24
Sailfin molly	MODERN SPECIES	1904														timmdc1 (ENSPLAG00000016038)	poglut1 (ENSPLAG00000016030)	ENSPLAG00000016020 ##22	VANGL1 (ENSPLAG00000015990) ##23	ENSPLAG00000015977 ##24
Amazon molly	MODERN SPECIES	754						ENSPFOG00000000948	ENSPFOG00000001179	pum3 (ENSPFOG00000001719)	KCNV2 (ENSPFOG00000002066)	ENSPFOG00000002268	n6amt1 (ENSPFOG00000002291)	gart (ENSPFOG00000002306)	abcc4 (ENSPFOG00000002687)	timmdc1 (ENSPFOG00000003393)	poglut1 (ENSPFOG00000003508)	ENSPFOG00000003660 ##22	VANGL1 (ENSPFOG00000003871) ##23	ENSPFOG00000020651 ##24
Guppy	MODERN SPECIES	450							ENSPREG00000006268	ENSPREG00000006273	arl13b (ENSPREG00000006291)	NCAM2 (ENSPREG00000006354)	gart (ENSPREG00000006412)	n6amt1 (ENSPREG00000006451)	abcc4 (ENSPREG00000006484)	timmdc1 (ENSPREG00000006517)	poglut1 (ENSPREG00000006540)	ENSPREG00000006595 ##22	VANGL1 (ENSPREG00000006642) ##23	ENSPREG00000006658 ##24	ENSPREG00000006668 ##27	ENSPREG00000006674	ENSPREG00000006749 ##9	ENSPREG00000006788	sap18 (ENSPREG00000006803)	rtraf (ENSPREG00000007105)	NID2 (ENSPREG00000006869)	TXNDC16 (ENSPREG00000007145)	gpr137c (ENSPREG00000007176)	ENSPREG00000007209	ENSPREG00000007229	ENSPREG00000007265	ENSPREG00000007299
Platyfish	MODERN SPECIES	16	ENSXMAG00000023795	chn1 (ENSXMAG00000002118)	ENSXMAG00000002116	FARP1 (ENSXMAG00000002095)	ENSXMAG00000002094	arl13b (ENSXMAG00000002089)	ENSXMAG00000002065	GPR180 (ENSXMAG00000029125)	ENSXMAG00000025308	ENSXMAG00000027926	gart (ENSXMAG00000002877)	n6amt1 (ENSXMAG00000002875)	abcc4 (ENSXMAG00000002832)	timmdc1 (ENSXMAG00000027990)	poglut1 (ENSXMAG00000002810)	ENSXMAG00000002800 ##22	VANGL1 (ENSXMAG00000002790) ##23	ENSXMAG00000020348 ##24	ENSXMAG00000024930 ##27	ENSXMAG00000002778	GJA3 (ENSXMAG00000021680) ##9	GPR180 (ENSXMAG00000028271)	ENSXMAG00000026816	ENSXMAG00000015323	sap18 (ENSXMAG00000028308)	rtraf (ENSXMAG00000015292)	ENSXMAG00000025122	ENSXMAG00000028677	ENSXMAG00000023929	ENSXMAG00000022834	ENSXMAG00000028615
Oryzias	ANCESTRAL SPECIES	26	ENSGT00940000156219.e.b	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c.a	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Oryzias_b	ANCESTRAL SPECIES	24	ENSGT00530000063779.A.e.b	ENSGT00940000156219.e.b	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c.a	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00390000018436.b.m.b	ENSGT00990000203744.b	ENSGT00390000018436.b.m.a	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080.c	ENSGT00940000153986.a	ENSGT00940000158446
Javanese ricefish	MODERN SPECIES	11	XIRP2 (ENSOJAG00000022170)	ENSOJAG00000022186	ABCB11 (ENSOJAG00000022235)	ENSOJAG00000023147	atp5f1b (ENSOJAG00000023157)	ENSOJAG00000023182	klhl41b (ENSOJAG00000023207)	ENSOJAG00000023212	ENSOJAG00000023219	ENSOJAG00000023225	CLDN10 (ENSOJAG00000023239)	ENSOJAG00000023247	abcc4 (ENSOJAG00000023409)	timmdc1 (ENSOJAG00000023431)	poglut1 (ENSOJAG00000023436)	ENSOJAG00000023466 ##22	VANGL1 (ENSOJAG00000023520) ##23	ENSOJAG00000000079 ##24	ENSOJAG00000000090 ##27	ENSOJAG00000000225	GJA3 (ENSOJAG00000000292) ##9	ENSOJAG00000000299	sap18 (ENSOJAG00000000305)	rtraf (ENSOJAG00000000315)	ENSOJAG00000000354	gpr137c (ENSOJAG00000000358)	acp2 (ENSOJAG00000000364)	irs2a (ENSOJAG00000000371)	lig4 (ENSOJAG00000000378)	NALF1 (ENSOJAG00000000389)	cpo (ENSOJAG00000000417)
Indian medaka	MODERN SPECIES	24	CSRNP3 (ENSOMEG00000002673)	XIRP2 (ENSOMEG00000002684)	B3GALT1 (ENSOMEG00000002690)	ABCB11 (ENSOMEG00000002746)	DHRS9 (ENSOMEG00000002764)	atp5f1b (ENSOMEG00000002774)	ENSOMEG00000002832	klhl41b (ENSOMEG00000002859)	ENSOMEG00000002885	ENSOMEG00000002890	dzip1 (ENSOMEG00000002920)	ENSOMEG00000002937	ENSOMEG00000002954	abcc4 (ENSOMEG00000003052)	timmdc1 (ENSOMEG00000003076)	ENSOMEG00000003106 ##22	VANGL1 (ENSOMEG00000003172) ##23	ENSOMEG00000003182 ##24	ENSOMEG00000003194 ##27	ENSOMEG00000003218	GJA3 (ENSOMEG00000003229) ##9	ENSOMEG00000003248	sap18 (ENSOMEG00000003276)	rtraf (ENSOMEG00000003305)	ENSOMEG00000003326	ENSOMEG00000003347	ENSOMEG00000003362	ptger2a (ENSOMEG00000003371)	TXNDC16 (ENSOMEG00000003394)	gpr137c (ENSOMEG00000003416)	acp2 (ENSOMEG00000003443)
Oryzias_a	ANCESTRAL SPECIES	28	ENSGT00940000156219.e.b	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c.a	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000153931.b.b.c.n	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00980000198666	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00980000199433	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Japanese Medaka HdrR	MODERN SPECIES	11	ENSORLG00000003479	ENSORLG00000003489	atp5f1b (ENSORLG00000003517)	ENSORLG00000025630	ENSORLG00000003547	oxgr1a.2 (ENSORLG00000003552)	ENSORLG00000003563	dzip1 (ENSORLG00000003586)	ENSORLG00000003599	ENSORLG00000003608	abcc4 (ENSORLG00000021976)	ENSORLG00000003652	ENSORLG00000024538	timmdc1 (ENSORLG00000003696)	poglut1 (ENSORLG00000003715)	ENSORLG00000024738 ##22	VANGL1 (ENSORLG00000003756) ##23	ENSORLG00000026288	hpxb (ENSORLG00000003807)	ENSORLG00000003822 ##9	ENSORLG00000003830	ENSORLG00000029407	sap18 (ENSORLG00000024118)	rtraf (ENSORLG00000003840)	NID2 (ENSORLG00000003890)	ptger2a (ENSORLG00000003901)	TXNDC16 (ENSORLG00000003913)	gpr137c (ENSORLG00000003931)	acp2 (ENSORLG00000004029)	irs2a (ENSORLG00000004036)	lig4 (ENSORLG00000004041)
Chinese medaka	MODERN SPECIES	1280													abcc4 (ENSOSIG00000008756)	ENSOSIG00000010414	poglut1 (ENSOSIG00000010503)	ENSOSIG00000010562 ##22	VANGL1 (ENSOSIG00000014453) ##23	ENSOSIG00000014454 ##27	ENSOSIG00000014456	GJA3 (ENSOSIG00000016027) ##9	ENSOSIG00000016028	ENSOSIG00000016029	sap18 (ENSOSIG00000016030)	rtraf (ENSOSIG00000016031)	NID2 (ENSOSIG00000016037)	ptger2a (ENSOSIG00000016524)	TXNDC16 (ENSOSIG00000016532)	gpr137c (ENSOSIG00000016534)	acp2 (ENSOSIG00000016537)	irs2a (ENSOSIG00000016539)	lig4 (ENSOSIG00000016541)
Ovalentaria_B	ANCESTRAL SPECIES	22	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT01090000260278	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Pomacentridae	ANCESTRAL SPECIES	101													ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446.d	ENSGT00940000161407.b
Pomacentridae_A	ANCESTRAL SPECIES	138													ENSGT00940000153931.b.b.d.c	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446.d	ENSGT00940000161407.b
Amphiprion	ANCESTRAL SPECIES	171													ENSGT00940000153931.b.b.d.c	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446.d	ENSGT00940000161407.b
Clown anemonefish	MODERN SPECIES	671													abcc4 (ENSAOCG00000010956)	TIMMDC1 (ENSAOCG00000010997)	poglut1 (ENSAOCG00000011011)	ENSAOCG00000011055 ##22	VANGL1 (ENSAOCG00000011117) ##23	ENSAOCG00000011129 ##24	ENSAOCG00000011137	ENSAOCG00000011185	GJA3 (ENSAOCG00000002264) ##9	ENSAOCG00000011245	sap18 (ENSAOCG00000011273)	rtraf (ENSAOCG00000011309)	ENSAOCG00000011337	NID2 (ENSAOCG00000011544)	ptger2a (ENSAOCG00000002143)	ENSAOCG00000011684	gpr137c (ENSAOCG00000011705)	acp2 (ENSAOCG00000011731)	irs2a (ENSAOCG00000002726)
Orange clownfish	MODERN SPECIES	16	mmadhca (ENSAPEG00000016004)	rnd3a (ENSAPEG00000016066)	ENSAPEG00000016092	ENSAPEG00000016108	ZRANB3 (ENSAPEG00000016183)	ccnt2b (ENSAPEG00000016213)	TMEM163 (ENSAPEG00000016364)	ENSAPEG00000016426	ENSAPEG00000016440	ENSAPEG00000016452	NBEAL1 (ENSAPEG00000016493)	abcc4 (ENSAPEG00000016691)	timmdc1 (ENSAPEG00000016790)	abcc4 (ENSAPEG00000016844)	poglut1 (ENSAPEG00000017201)	ENSAPEG00000017225 ##22	VANGL1 (ENSAPEG00000017272) ##23	ENSAPEG00000017320 ##24	ENSAPEG00000017329	ENSAPEG00000017349	GJA3 (ENSAPEG00000017441) ##9	ENSAPEG00000017526	sap18 (ENSAPEG00000017547)	rtraf (ENSAPEG00000017571)	NID2 (ENSAPEG00000017618)	ENSAPEG00000017731	ptger2a (ENSAPEG00000017743)	ENSAPEG00000017748	gpr137c (ENSAPEG00000017784)	acp2 (ENSAPEG00000017795)	irs2a (ENSAPEG00000017808)
Spiny chromis	MODERN SPECIES	232													ENSAPOG00000007323	TIMMDC1 (ENSAPOG00000007299)	poglut1 (ENSAPOG00000007285)	ENSAPOG00000007240 ##22	VANGL1 (ENSAPOG00000007189) ##23	ENSAPOG00000007135 ##24	ENSAPOG00000007128	ENSAPOG00000007110	GJA3 (ENSAPOG00000007088) ##9	ENSAPOG00000007075	sap18 (ENSAPOG00000007060)	rtraf (ENSAPOG00000007040)	NID2 (ENSAPOG00000006960)	ENSAPOG00000006575	ptger2a (ENSAPOG00000006550)	TXNDC16 (ENSAPOG00000006535)	gpr137c (ENSAPOG00000006516)	acp2 (ENSAPOG00000006482)	irs2a (ENSAPOG00000006407)
Bicolor damselfish	MODERN SPECIES	1578													ENSSPAG00000003877	ENSSPAG00000003868	poglut1 (ENSSPAG00000003840)	ENSSPAG00000003805 ##22	VANGL1 (ENSSPAG00000003780) ##23	ENSSPAG00000003769 ##24	ENSSPAG00000003761	ENSSPAG00000003691	GJA3 (ENSSPAG00000003667) ##9
Cichlidae	ANCESTRAL SPECIES	30	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a	ENSGT00940000153931.b.b.d.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	25	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a	ENSGT00940000153931.b.b.d.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	29	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a	ENSGT00940000153931.b.b.d.b.a.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b.g	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Haplochromini	ANCESTRAL SPECIES	26	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a	ENSGT00940000153931.b.b.d.b.a.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b.g	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Burton s mouthbrooder	MODERN SPECIES	711										abcc4 (ENSHBUG00000022482)	abcc4 (ENSHBUG00000022376)	abcc4 (ENSHBUG00000021948)	ENSHBUG00000021844	timmdc1 (ENSHBUG00000021825)	poglut1 (ENSHBUG00000021817)	ENSHBUG00000021766 ##22	VANGL1 (ENSHBUG00000021734) ##23	ENSHBUG00000021708 ##24	ENSHBUG00000021701 ##27	ENSHBUG00000021684	ENSHBUG00000021674 ##9	ENSHBUG00000021669	sap18 (ENSHBUG00000021639)	rtraf (ENSHBUG00000021593)	NID2 (ENSHBUG00000021550)	ENSHBUG00000021314	ptger2a (ENSHBUG00000000655)
Haplochromini_A	ANCESTRAL SPECIES	29	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a	ENSGT00940000153931.b.b.d.b.a.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Haplochromini_B	ANCESTRAL SPECIES	38	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d.a.a	ENSGT00940000153931.b.b.d.a.b	ENSGT00940000153931.b.b.d.b.a.b	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Zebra mbuna	MODERN SPECIES	1105	gcga (ENSMZEG00005018100)	SLC4A10 (ENSMZEG00005018109)	ENSMZEG00005018124	stk24b (ENSMZEG00005000089)	slc15a1b (ENSMZEG00005000174)	ENSMZEG00005000301	bmpr2a (ENSMZEG00005000531)	FAM117B (ENSMZEG00005000609)	ICA1L (ENSMZEG00005000645)	wdr12 (ENSMZEG00005000653)	nop58 (ENSMZEG00005000668)	ENSMZEG00005000712	ENSMZEG00005000726	timmdc1 (ENSMZEG00005000739)	poglut1 (ENSMZEG00005000749)	ENSMZEG00005000789 ##22	VANGL1 (ENSMZEG00005000829) ##23	ENSMZEG00005000868 ##24	ENSMZEG00005000878 ##27	ENSMZEG00005000900	ENSMZEG00005000953 ##9	ENSMZEG00005001396	sap18 (ENSMZEG00005001627)	rtraf (ENSMZEG00005001641)	NID2 (ENSMZEG00005001685)	ptger2a (ENSMZEG00005001734)	ENSMZEG00005001740	TXNDC16 (ENSMZEG00005001753)	gpr137c (ENSMZEG00005001770)	acp2 (ENSMZEG00005001825)	irs2a (ENSMZEG00005001844)
Eastern happy	MODERN SPECIES	14	atp5f1b (ENSACLG00000026089)	ENSACLG00000026109	klhl41b (ENSACLG00000026171)	oxgr1a.2 (ENSACLG00000026178)	ENSACLG00000026205	dzip1 (ENSACLG00000026209)	CLDN10 (ENSACLG00000026252)	ENSACLG00000026264	cldn10a (ENSACLG00000026276)	abcc4 (ENSACLG00000026290)	ENSACLG00000026383	abcc4 (ENSACLG00000026393)	abcc4 (ENSACLG00000026475)	timmdc1 (ENSACLG00000026745)	poglut1 (ENSACLG00000026763)	ENSACLG00000026809 ##22	VANGL1 (ENSACLG00000026843) ##23	ENSACLG00000026865 ##24	ENSACLG00000026873 ##27	ENSACLG00000026880	ENSACLG00000026893 ##9	ENSACLG00000026897	sap18 (ENSACLG00000026904)	rtraf (ENSACLG00000026910)	NID2 (ENSACLG00000026927)	ptger2a (ENSACLG00000026997)	ENSACLG00000027001	TXNDC16 (ENSACLG00000027003)	gpr137c (ENSACLG00000027019)	acp2 (ENSACLG00000027034)	ENSACLG00000027045
P. nyererei	MODERN SPECIES	436	DHRS9 (ENSPNYG00000018305)	atp5f1b (ENSPNYG00000018291)	ENSPNYG00000018237	klhl41b (ENSPNYG00000018227)	oxgr1a.2 (ENSPNYG00000018210)	ENSPNYG00000018208	dzip1 (ENSPNYG00000018169)	CLDN10 (ENSPNYG00000018143)	ENSPNYG00000018122	cldn10a (ENSPNYG00000018100)	abcc4 (ENSPNYG00000018031)	abcc4 (ENSPNYG00000017511)	abcc4 (ENSPNYG00000017304)	timmdc1 (ENSPNYG00000017273)	poglut1 (ENSPNYG00000017241)	ENSPNYG00000017217 ##22	VANGL1 (ENSPNYG00000017182) ##23	ENSPNYG00000017170 ##24	ENSPNYG00000017156	ENSPNYG00000017085	ENSPNYG00000017061 ##9	ENSPNYG00000017048	sap18 (ENSPNYG00000017029)	rtraf (ENSPNYG00000016994)	NID2 (ENSPNYG00000016811)	ptger2a (ENSPNYG00000016772)
Lyretail cichlid	MODERN SPECIES	405	atp5f1b (ENSNBRG00000022063)	ENSNBRG00000022023	klhl41b (ENSNBRG00000021951)	oxgr1a.2 (ENSNBRG00000021932)	ENSNBRG00000021913	ENSNBRG00000021900	CLDN10 (ENSNBRG00000021894)	ENSNBRG00000021872	cldn10a (ENSNBRG00000021831)	abcc4 (ENSNBRG00000021778)	abcc4 (ENSNBRG00000021711)	ENSNBRG00000021682	ENSNBRG00000021667	ENSNBRG00000021658	poglut1 (ENSNBRG00000021607)	CASQ2 (ENSNBRG00000021584) ##22	VANGL1 (ENSNBRG00000021560) ##23	ENSNBRG00000021551 ##24	ENSNBRG00000021548	ENSNBRG00000021539	ENSNBRG00000021518 ##9	ENSNBRG00000021493	ENSNBRG00000021423	rtraf (ENSNBRG00000021394)	ENSNBRG00000021384	NID2 (ENSNBRG00000021344)	ptger2a (ENSNBRG00000021341)	ENSNBRG00000021316	gpr137c (ENSNBRG00000021282)	acp2 (ENSNBRG00000021269)	irs2a (ENSNBRG00000021263)
Nile tilapia	MODERN SPECIES	14	ENSONIG00000011854	atp5f1b (ENSONIG00000008803)	ENSONIG00000011865	klhl41b (ENSONIG00000011872)	oxgr1a.2 (ENSONIG00000021014)	HS6ST3 (ENSONIG00000011874)	ENSONIG00000042308	dzip1 (ENSONIG00000011875)	CLDN10 (ENSONIG00000011879)	ENSONIG00000040118	cldn10a (ENSONIG00000011882)	abcc4 (ENSONIG00000011884)	abcc4 (ENSONIG00000011902)	ENSONIG00000011916	poglut1 (ENSONIG00000011917)	ENSONIG00000011918 ##22	VANGL1 (ENSONIG00000011927) ##23	ENSONIG00000021015 ##24	ENSONIG00000040619 ##27	ENSONIG00000011928 #29	ENSONIG00000011933 ##9	ENSONIG00000011934	sap18 (ENSONIG00000011935)	rtraf (ENSONIG00000011937)	NID2 (ENSONIG00000011939)	ptger2a (ENSONIG00000041344)	ENSONIG00000029002	ENSONIG00000036731	txndc16 (ENSONIG00000011953)	gpr137c (ENSONIG00000011958)	acp2 (ENSONIG00000011961)
Nile tilapia	MODERN SPECIES	46														ENSONIG00000037224	poglut1 (ENSONIG00000036081)	ENSONIG00000041646 ##22
Midas cichlid	MODERN SPECIES	809			ENSACIG00000019775	atp5f1b (ENSACIG00000019484)	ENSACIG00000019451	klhl41b (ENSACIG00000019443)	oxgr1a.2 (ENSACIG00000019433)	ENSACIG00000019398	dzip1 (ENSACIG00000019314)	ENSACIG00000019297	cldn10a (ENSACIG00000019275)	abcc4 (ENSACIG00000019235)	abcc4 (ENSACIG00000018894)	timmdc1 (ENSACIG00000018823)	poglut1 (ENSACIG00000018808)	ENSACIG00000018790 ##22	VANGL1 (ENSACIG00000018773) ##23	ENSACIG00000018769 ##24	ENSACIG00000018759 ##27	ENSACIG00000018745	GJA3 (ENSACIG00000018715) ##9	ENSACIG00000018683	sap18 (ENSACIG00000018672)	rtraf (ENSACIG00000018652)	NID2 (ENSACIG00000018509)	ptger2a (ENSACIG00000018453)	TXNDC16 (ENSACIG00000018418)	gpr137c (ENSACIG00000018377)	acp2 (ENSACIG00000018330)	irs2a (ENSACIG00000018318)	lig4 (ENSACIG00000018309)
Percomorphaceae_C	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Percomorphaceae_D	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000177331	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
Anabantaria	ANCESTRAL SPECIES	23	ENSGT00940000156219.e.b	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Anabantoidei	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b.h	ENSGT00940000155232.t.a.b.b.g	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Siamese fighting fish	MODERN SPECIES	10	B3GALT1 (ENSBSLG00000001176)	ABCB11 (ENSBSLG00000001025)	DHRS9 (ENSBSLG00000000364)	atp5f1b (ENSBSLG00000000313)	ENSBSLG00000000291	klhl41b (ENSBSLG00000000277)	ENSBSLG00000000270	dzip1 (ENSBSLG00000000246)	ENSBSLG00000000224	ENSBSLG00000000160	ENSBSLG00000000120	cldn10a (ENSBSLG00000006065)	abcc4 (ENSBSLG00000004189)	timmdc1 (ENSBSLG00000003562)	poglut1 (ENSBSLG00000003561)	ENSBSLG00000003560 ##22	VANGL1 (ENSBSLG00000003559) ##23	ENSBSLG00000003558 ##24	ENSBSLG00000003557 ##27	ENSBSLG00000003556	ENSBSLG00000003555 ##9	ENSBSLG00000003554	sap18 (ENSBSLG00000003552)	rtraf (ENSBSLG00000003553)	NID2 (ENSBSLG00000003549)	ptger2a (ENSBSLG00000003547)	TXNDC16 (ENSBSLG00000003546)	gpr137c (ENSBSLG00000003545)	acp2 (ENSBSLG00000003544)	ENSBSLG00000003543	irs2a (ENSBSLG00000003542)
Climbing perch	MODERN SPECIES	11	DHRS9 (ENSATEG00000007644)	ENSATEG00000007596	ENSATEG00000007403	ENSATEG00000007396	ENSATEG00000026945	ENSATEG00000027916	dzip1 (ENSATEG00000007300)	ENSATEG00000007278	ENSATEG00000007246	ENSATEG00000007221	ENSATEG00000007216	cldn10a (ENSATEG00000007198)	abcc4 (ENSATEG00000007071)	ENSATEG00000007045	ENSATEG00000007035	ENSATEG00000006993 ##22	ENSATEG00000006962 ##23	ENSATEG00000006956 ##24	ENSATEG00000006945	ENSATEG00000006294 #29	ENSATEG00000006237 ##9	ENSATEG00000006213	ENSATEG00000006190	rtraf (ENSATEG00000006137)	NID2 (ENSATEG00000005891)	ptger2a (ENSATEG00000005880)	TXNDC16 (ENSATEG00000005682)	gpr137c (ENSATEG00000005621)	ENSATEG00000005610	irs2a (ENSATEG00000005603)	lig4 (ENSATEG00000005583)
Zig-zag eel	MODERN SPECIES	11	ENSMAMG00000005123	EN1 (ENSMAMG00000005134)	C1QL2 (ENSMAMG00000027618)	STEAP3 (ENSMAMG00000005197)	DBI (ENSMAMG00000005224)	ENSMAMG00000005413	ENSMAMG00000026028	ENSMAMG00000005549	GABRG3 (ENSMAMG00000005586)	ENSMAMG00000005619	GABRB3 (ENSMAMG00000005647)	ENSMAMG00000005832	ENSMAMG00000005860	ENSMAMG00000005967	ENSMAMG00000005984	ENSMAMG00000006029 ##22	ENSMAMG00000006057 ##23	ENSMAMG00000006165 ##24	ENSMAMG00000027216	ENSMAMG00000006189	ENSMAMG00000006240 ##9	ENSMAMG00000007790	ENSMAMG00000027682	rtraf (ENSMAMG00000027471)	NID2 (ENSMAMG00000008242)	ENSMAMG00000028696	ptger2a (ENSMAMG00000027924)	TXNDC16 (ENSMAMG00000008377)	gpr137c (ENSMAMG00000008405)	ENSMAMG00000008443	irs2a (ENSMAMG00000008464)
Carangaria	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000177331	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
Carangaria_A	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.b	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b
Seriola	ANCESTRAL SPECIES	37	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT00990000203744.a.b	ENSGT00990000203744.a.a	ENSGT00940000177331	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a
Yellowtail amberjack	MODERN SPECIES	3249													abcc4 (ENSSLDG00000001650)	timmdc1 (ENSSLDG00000002294)	poglut1 (ENSSLDG00000002308)	ENSSLDG00000002324 ##22	VANGL1 (ENSSLDG00000002386) ##23	ENSSLDG00000002456 ##24	ENSSLDG00000002461 ##27	ENSSLDG00000002479	GJA3 (ENSSLDG00000002519) ##9	ENSSLDG00000002541	sap18 (ENSSLDG00000002570)	rtraf (ENSSLDG00000002632)	NID2 (ENSSLDG00000002699)	ENSSLDG00000002847	ENSSLDG00000002889	ENSSLDG00000002919	ptger2a (ENSSLDG00000002941)	TXNDC16 (ENSSLDG00000003004)	gpr137c (ENSSLDG00000003107)
Greater amberjack	MODERN SPECIES	45	ABCB11 (ENSSDUG00000008985)	ENSSDUG00000009035	atp5f1b (ENSSDUG00000009115)	ENSSDUG00000009149	klhl41b (ENSSDUG00000009260)	oxgr1a.2 (ENSSDUG00000009281)	ENSSDUG00000009287	dzip1 (ENSSDUG00000009319)	CLDN10 (ENSSDUG00000009377)	ENSSDUG00000009392	cldn10a (ENSSDUG00000009409)	abcc4 (ENSSDUG00000009429)	abcc4 (ENSSDUG00000009498)	timmdc1 (ENSSDUG00000009554)	poglut1 (ENSSDUG00000009584)	ENSSDUG00000009612 ##22	VANGL1 (ENSSDUG00000009639) ##23	ENSSDUG00000009668 ##24	ENSSDUG00000009674	ENSSDUG00000009688	ENSSDUG00000009702	GJA3 (ENSSDUG00000009758) ##9	ENSSDUG00000009836	sap18 (ENSSDUG00000009906)	rtraf (ENSSDUG00000009986)	NID2 (ENSSDUG00000010018)	ENSSDUG00000010108	ENSSDUG00000010150	ptger2a (ENSSDUG00000010181)	TXNDC16 (ENSSDUG00000010258)	gpr137c (ENSSDUG00000010292)
Barramundi perch	MODERN SPECIES	277		B3GALT1 (ENSLCAG00010024500)	ENSLCAG00010024505	ENSLCAG00010024512	ENSLCAG00010024519	CSRNP3 (ENSLCAG00010000217)	scn1lab (ENSLCAG00010000562)	ENSLCAG00010000858	ENSLCAG00010000862	ENSLCAG00010000868	KCNH7 (ENSLCAG00010000922)	gca (ENSLCAG00010001011)	dpp4 (ENSLCAG00010001330)	timmdc1 (ENSLCAG00010002386)	poglut1 (ENSLCAG00010002390)	ENSLCAG00010002394 ##22	VANGL1 (ENSLCAG00010002398) ##23	ENSLCAG00010002403 ##24	ENSLCAG00010002405 ##27	ENSLCAG00010002407	GJA3 (ENSLCAG00010002410) ##9	ENSLCAG00010002416	sap18 (ENSLCAG00010002421)	rtraf (ENSLCAG00010002424)
Pleuronectoidei	ANCESTRAL SPECIES	95														ENSGT00940000153931.b.b.d	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164246.C.d.b ##27	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Tongue sole	MODERN SPECIES	5	ENSCSEG00000014101	ENSCSEG00000014095	ENSCSEG00000014070	pomca (ENSCSEG00000014056)	ENSCSEG00000014035	STRADB (ENSCSEG00000014020)	TRAK2 (ENSCSEG00000014003)	abcc4 (ENSCSEG00000013948)	cldn10a (ENSCSEG00000013936)	ENSCSEG00000013927	acp2 (ENSCSEG00000013919)	NALF1 (ENSCSEG00000013914)	lig4 (ENSCSEG00000013905)	irs2a (ENSCSEG00000013902)	poglut1 (ENSCSEG00000013890)	ENSCSEG00000013870 ##22	VANGL1 (ENSCSEG00000013860) ##23	ENSCSEG00000013855 ##27	ENSCSEG00000013851 ##24	ENSCSEG00000013822	sap18 (ENSCSEG00000013784)	rtraf (ENSCSEG00000013756)	ENSCSEG00000013745	ENSCSEG00000013738	ENSCSEG00000013718	ENSCSEG00000013709	NID2 (ENSCSEG00000013673)	ptger2a (ENSCSEG00000013665)	TXNDC16 (ENSCSEG00000013621)	gpr137c (ENSCSEG00000013601)	ENSCSEG00000013591
Turbot	MODERN SPECIES		ENSSMAG00000005546	ENSSMAG00000005501	ENSSMAG00000005432	ENSSMAG00000026957	ENSSMAG00000003677	ENSSMAG00000003618	ENSSMAG00000003575	ENSSMAG00000003530	ENSSMAG00000003494	slitrk6 (ENSSMAG00000003486)	ENSSMAG00000003464	ENSSMAG00000003455	ndfip2 (ENSSMAG00000003438)	ENSSMAG00000002175	ENSSMAG00000002278	ENSSMAG00000002313 ##22	ENSSMAG00000002346 ##23	ENSSMAG00000002433	ENSSMAG00000002440	ENSSMAG00000002521 ##9	ENSSMAG00000002549	ENSSMAG00000002568	ENSSMAG00000002579	ENSSMAG00000002600	ENSSMAG00000002704	ENSSMAG00000030615	ENSSMAG00000002735	ENSSMAG00000002846	ENSSMAG00000002892	ENSSMAG00000002956	ENSSMAG00000002978
Eupercaria	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Tetraodontidae	ANCESTRAL SPECIES	22	ENSGT00940000161407.b	ENSGT00940000158446	ENSGT00940000153986.a	ENSGT00390000006080	ENSGT01050000244902.b.c.a.a	ENSGT00940000157901	ENSGT00390000005163	ENSGT00390000003152	ENSGT01030000234513.B.b.d	ENSGT01050000244864.B.b.a.a ##9	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00390000009178	ENSGT00940000154342.C	ENSGT00530000063484.b.b.d.b	ENSGT00390000003758	ENSGT00940000153534.A	ENSGT00930000150950.b	ENSGT00390000005530.a.a	ENSGT00950000183046.a.a.gb	ENSGT00940000156449.b.a	ENSGT00940000155972.A	ENSGT00940000155995.e.a	ENSGT00940000153476.b.o.b	ENSGT00940000156972.d
Tetraodon	MODERN SPECIES	18	irs2a (ENSTNIG00000010347)	acp2 (ENSTNIG00000010346)	gpr137c (ENSTNIG00000010345)	TXNDC16 (ENSTNIG00000000818)	ptger2a (ENSTNIG00000010344)	NID2 (ENSTNIG00000010343)	rtraf (ENSTNIG00000010342)	sap18 (ENSTNIG00000010341)	ENSTNIG00000010340	GJA3 (ENSTNIG00000010339) ##9	CLDN10 (ENSTNIG00000010338)	abcc4 (ENSTNIG00000010337)	abcc4 (ENSTNIG00000010336)	timmdc1 (ENSTNIG00000010335)	poglut1 (ENSTNIG00000010334)	ENSTNIG00000010333 ##22	VANGL1 (ENSTNIG00000010332) ##23	ENSTNIG00000010331 ##24	ENSTNIG00000013289	dmd (ENSTNIG00000013288)	ENSTNIG00000000279	tmem47 (ENSTNIG00000013287)	wdr12 (ENSTNIG00000013286)	ICA1L (ENSTNIG00000013285)	FAM117B (ENSTNIG00000013284)	bmpr2a (ENSTNIG00000013283)	ENSTNIG00000013282	slc15a1b (ENSTNIG00000013281)	stk24b (ENSTNIG00000013280)	ENSTNIG00000013279	gcga (ENSTNIG00000013278)
Fugu	MODERN SPECIES	20	lig4 (ENSTRUG00000009984)	irs2a (ENSTRUG00000009972)	acp2 (ENSTRUG00000009627)	gpr137c (ENSTRUG00000009379)	TXNDC16 (ENSTRUG00000009266)	ptger2a (ENSTRUG00000021655)	NID2 (ENSTRUG00000008498)	rtraf (ENSTRUG00000022455)	sap18 (ENSTRUG00000008250)	ENSTRUG00000007919	ENSTRUG00000021588 ##9	cldn10a (ENSTRUG00000007790)	abcc4 (ENSTRUG00000006211)	timmdc1 (ENSTRUG00000024010)	poglut1 (ENSTRUG00000004664)	ENSTRUG00000004018 ##22	VANGL1 (ENSTRUG00000003698) ##23	ENSTRUG00000003636 ##24	wap65-2 (ENSTRUG00000002894)	DMD (ENSTRUG00000001903)	ENSTRUG00000022303	tmem47 (ENSTRUG00000028181)	ENSTRUG00000005022	nop58 (ENSTRUG00000005053)	wdr12 (ENSTRUG00000020447)	ICA1L (ENSTRUG00000005819)	FAM117B (ENSTRUG00000006185)	bmpr2a (ENSTRUG00000006256)	slc15a1b (ENSTRUG00000007507)	stk24b (ENSTRUG00000008054)	SLC4A10 (ENSTRUG00000008287)
Eupecaria_A	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Eupecaria_B	ANCESTRAL SPECIES	23	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Eupecaria_C	ANCESTRAL SPECIES	27	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166809	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	31	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00990000203744.b	ENSGT00990000203744.a.a	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446
Large yellow croaker	MODERN SPECIES	486	ABCB11 (ENSLCRG00005023876)	ENSLCRG00005023886	atp5f1b (ENSLCRG00005023887)	ENSLCRG00005023888	klhl41b (ENSLCRG00005023889)	oxgr1a.2 (ENSLCRG00005023890)	ENSLCRG00005000809	dzip1 (ENSLCRG00005000817)	ENSLCRG00005000840	ENSLCRG00005000847	ENSLCRG00005000849	cldn10a (ENSLCRG00005000853)	abcc4 (ENSLCRG00005000935)	timmdc1 (ENSLCRG00005003482)	poglut1 (ENSLCRG00005003484)	ENSLCRG00005003569 ##22	VANGL1 (ENSLCRG00005003685) ##23	ENSLCRG00005003688 ##24	ENSLCRG00005003690 ##27	ENSLCRG00005003691	ENSLCRG00005003810	ENSLCRG00005003814 ##9	ENSLCRG00005003834	sap18 (ENSLCRG00005003836)	rtraf (ENSLCRG00005003838)	NID2 (ENSLCRG00005003845)	ENSLCRG00005003857	ENSLCRG00005003860	ENSLCRG00005003861	ptger2a (ENSLCRG00005003864)	TXNDC16 (ENSLCRG00005003867)
European seabass	MODERN SPECIES	15	ENSDLAG00005018319	ENSDLAG00005007877	ENSDLAG00005018338	ENSDLAG00005018479	ENSDLAG00005018591	ENSDLAG00005028973	ENSDLAG00005033567	dzip1 (ENSDLAG00005018609)	ENSDLAG00005018633	ENSDLAG00005026898	ENSDLAG00005018645	cldn10a (ENSDLAG00005027396)	abcc4 (ENSDLAG00005018693)	ENSDLAG00005019646	ENSDLAG00005020769	ENSDLAG00005021034 ##22	ENSDLAG00005021289 ##23	ENSDLAG00005034835 ##24	ENSDLAG00005021299 ##27	ENSDLAG00005021309	ENSDLAG00005030988 ##9	ENSDLAG00005034705	ENSDLAG00005021388	rtraf (ENSDLAG00005028950)	NID2 (ENSDLAG00005021417)	ptger2a (ENSDLAG00005021780)	TXNDC16 (ENSDLAG00005021786)	gpr137c (ENSDLAG00005030404)	ENSDLAG00005021832	ENSDLAG00005021875	irs2a (ENSDLAG00005032065)
Gilthead seabream	MODERN SPECIES	16	ABCB11 (ENSSAUG00010008285)	atp5f1b (ENSSAUG00010007970)	DHRS9 (ENSSAUG00010007966)	ENSSAUG00010007953	klhl41b (ENSSAUG00010007952)	oxgr1a.2 (ENSSAUG00010007951)	ENSSAUG00010007950	dzip1 (ENSSAUG00010007945)	CLDN10 (ENSSAUG00010007944)	ENSSAUG00010007943	cldn10a (ENSSAUG00010007942)	abcc4 (ENSSAUG00010007938)	abcc4 (ENSSAUG00010006260)	timmdc1 (ENSSAUG00010006240)	poglut1 (ENSSAUG00010006119)	ENSSAUG00010005673 ##22	VANGL1 (ENSSAUG00010005663) ##23	ENSSAUG00010005659 ##24	ENSSAUG00010005658 ##27	ENSSAUG00010005018	GJA3 (ENSSAUG00010005016) ##9	ENSSAUG00010005014	sap18 (ENSSAUG00010005013)	rtraf (ENSSAUG00010005012)	NID2 (ENSSAUG00010004847)	ptger2a (ENSSAUG00010004825)	TXNDC16 (ENSSAUG00010004820)	gpr137c (ENSSAUG00010004813)	acp2 (ENSSAUG00010004810)	irs2a (ENSSAUG00010004809)	lig4 (ENSSAUG00010004807)
Perciformes	ANCESTRAL SPECIES	24	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Cottioidei	ANCESTRAL SPECIES	24	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00980000198666	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Stickleback	MODERN SPECIES		ENSGACG00000013933	B3GALT1 (ENSGACG00000013934)	ABCB11 (ENSGACG00000013935)	ENSGACG00000013941	atp5f1b (ENSGACG00000013952)	ENSGACG00000013961	klhl41b (ENSGACG00000013970)	oxgr1a.2 (ENSGACG00000013975)	ENSGACG00000013976	dzip1 (ENSGACG00000013980)	ENSGACG00000013985	abcc4 (ENSGACG00000013989)	abcc4 (ENSGACG00000013999)	timmdc1 (ENSGACG00000014013)	poglut1 (ENSGACG00000014014)	ENSGACG00000014031 ##22	VANGL1 (ENSGACG00000014050) ##23	ENSGACG00000014053 ##24	ENSGACG00000014054	gja3 (ENSGACG00000014074) ##9	sap18 (ENSGACG00000014077)	rtraf (ENSGACG00000014087)	NID2 (ENSGACG00000014091)	ptger2a (ENSGACG00000014102)	TXNDC16 (ENSGACG00000014108)	gpr137c (ENSGACG00000014115)	acp2 (ENSGACG00000014119)	irs2a (ENSGACG00000014133)	lig4 (ENSGACG00000014135)	NALF1 (ENSGACG00000014137)	cckbra (ENSGACG00000014143)
Lumpfish	MODERN SPECIES	11	ABCB11 (ENSCLMG00005017081)	ENSCLMG00005017455	atp5f1b (ENSCLMG00005017456)	ENSCLMG00005017514	klhl41b (ENSCLMG00005017516)	oxgr1a.2 (ENSCLMG00005017518)	ENSCLMG00005017519	dzip1 (ENSCLMG00005017524)	CLDN10 (ENSCLMG00005017525)	ENSCLMG00005017526	cldn10a (ENSCLMG00005017527)	abcc4 (ENSCLMG00005017548)	ABCC4 (ENSCLMG00005017677)	timmdc1 (ENSCLMG00005020388)	poglut1 (ENSCLMG00005002818)	ENSCLMG00005002870 ##22	VANGL1 (ENSCLMG00005002909) ##23	ENSCLMG00005002927 ##24	ENSCLMG00005002936	ENSCLMG00005002956	GJA3 (ENSCLMG00005003012) ##9	ENSCLMG00005003261	sap18 (ENSCLMG00005003269)	rtraf (ENSCLMG00005003271)	NID2 (ENSCLMG00005003272)	ENSCLMG00005003273	ENSCLMG00005003284	ptger2a (ENSCLMG00005003292)	ENSCLMG00005003295	gpr137c (ENSCLMG00005003297)	acp2 (ENSCLMG00005003304)
Perciformes_a	ANCESTRAL SPECIES	25	ENSGT00940000157564	ENSGT00940000158665.d	ENSGT00550000074800.a.b	ENSGT00940000163195.B.a	ENSGT00940000158859.f	ENSGT01030000234621.F.c	ENSGT00950000183071.a.a.a.e.b	ENSGT00940000156862	ENSGT00940000155232.t.a.b.b	ENSGT00940000166422	ENSGT00940000155232.t.b.a	ENSGT00940000153931.b.b.c	ENSGT00940000153931.b.b.d	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.e ##22	ENSGT00390000012496.a.c ##23	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C.d.b ##27	ENSGT00390000009178	ENSGT01050000244864.B.b.a.a ##9	ENSGT01030000234513.B.b.d	ENSGT00390000003152	ENSGT00390000005163	ENSGT00940000157901	ENSGT01050000244902.b.c.a.a	ENSGT00390000006080	ENSGT00940000153986.a	ENSGT00940000158446	ENSGT00940000161407.b	ENSGT00860000133881
Channel bull blenny	MODERN SPECIES	11	ABCB11 (ENSCGOG00000019700)	ENSCGOG00000019822	atp5f1b (ENSCGOG00000019843)	ENSCGOG00000020240	klhl41b (ENSCGOG00000020244)	oxgr1a.2 (ENSCGOG00000020248)	ENSCGOG00000020249	dzip1 (ENSCGOG00000020251)	CLDN10 (ENSCGOG00000020256)	ENSCGOG00000020257	cldn10a (ENSCGOG00000020263)	abcc4 (ENSCGOG00000020410)	abcc4 (ENSCGOG00000022043)	timmdc1 (ENSCGOG00000022075)	poglut1 (ENSCGOG00000022083)	ENSCGOG00000022161 ##22	VANGL1 (ENSCGOG00000022165) ##23	ENSCGOG00000000072 ##24	ENSCGOG00000000086 ##27	ENSCGOG00000000128	GJA3 (ENSCGOG00000000231) ##9	ENSCGOG00000000269	sap18 (ENSCGOG00000000270)	rtraf (ENSCGOG00000000276)	NID2 (ENSCGOG00000000308)	ptger2a (ENSCGOG00000000388)	TXNDC16 (ENSCGOG00000000394)	gpr137c (ENSCGOG00000000398)	acp2 (ENSCGOG00000000409)	irs2a (ENSCGOG00000000419)	lig4 (ENSCGOG00000000420)
Pike perch	MODERN SPECIES	9	ABCB11 (ENSSLUG00000003360)	DHRS9 (ENSSLUG00000002416)	atp5f1b (ENSSLUG00000002324)	ENSSLUG00000002298	klhl41b (ENSSLUG00000002288)	oxgr1a.2 (ENSSLUG00000002282)	ENSSLUG00000002259	dzip1 (ENSSLUG00000002243)	ENSSLUG00000002237	ENSSLUG00000002232	cldn10a (ENSSLUG00000002227)	abcc4 (ENSSLUG00000025952)	ENSSLUG00000025944	ENSSLUG00000025943	poglut1 (ENSSLUG00000025941)	ENSSLUG00000025935 ##22	VANGL1 (ENSSLUG00000025930) ##23	ENSSLUG00000025928 ##24	ENSSLUG00000025927	ENSSLUG00000025911	GJA3 (ENSSLUG00000025906) ##9	ENSSLUG00000025905	sap18 (ENSSLUG00000025904)	rtraf (ENSSLUG00000025901)	ENSSLUG00000025900	NID2 (ENSSLUG00000025892)	ptger2a (ENSSLUG00000025868)	TXNDC16 (ENSSLUG00000025865)	gpr137c (ENSSLUG00000025862)	acp2 (ENSSLUG00000025861)	irs2a (ENSSLUG00000025860)
Ballan wrasse	MODERN SPECIES	372				ENSLBEG00000016323	ENSLBEG00000016314	ENSLBEG00000016297	ENSLBEG00000016284	ENSLBEG00000016260	GPR180 (ENSLBEG00000016230)	ENSLBEG00000016195	ENSLBEG00000016034	slc5a3a (ENSLBEG00000015949) ##20	abcc4 (ENSLBEG00000015874)	timmdc1 (ENSLBEG00000015817)	poglut1 (ENSLBEG00000015723)	ENSLBEG00000015664 ##22	VANGL1 (ENSLBEG00000015580) ##23	ENSLBEG00000015542 ##24	ENSLBEG00000015534	ENSLBEG00000015505	GJA3 (ENSLBEG00000015474) ##9	ENSLBEG00000015451	sap18 (ENSLBEG00000015362)	ENSLBEG00000015331	rtraf (ENSLBEG00000015300)	ENSLBEG00000015280	ENSLBEG00000015247	NID2 (ENSLBEG00000015163)	ptger2a (ENSLBEG00000015112)	ENSLBEG00000014903	gpr137c (ENSLBEG00000014747)
Tiger tail seahorse	MODERN SPECIES	514	ENSHCOG00000002638	mlpha (ENSHCOG00000002625)	ENSHCOG00000002611	ENSHCOG00000002601	eef1b2 (ENSHCOG00000002591)	ENSHCOG00000002582	arl11 (ENSHCOG00000002573)	cavin2b (ENSHCOG00000002559)	vps16 (ENSHCOG00000002549)	ENSHCOG00000002521	abcc4 (ENSHCOG00000002492)	ENSHCOG00000002451	ENSHCOG00000002443	ENSHCOG00000002437	poglut1 (ENSHCOG00000002429)	ENSHCOG00000002416 ##22	VANGL1 (ENSHCOG00000002405) ##23	ENSHCOG00000002380 ##24	ENSHCOG00000002376	ENSHCOG00000002368	GJA3 (ENSHCOG00000002357) ##9	sap18 (ENSHCOG00000002348)	rtraf (ENSHCOG00000002335)	ENSHCOG00000002321	ENSHCOG00000002313	ENSHCOG00000002302	ENSHCOG00000002284	ENSHCOG00000002279	ENSHCOG00000002271	ENSHCOG00000002244	ENSHCOG00000002230
Pinecone sodierfish	MODERN SPECIES	11	ABCB11 (ENSMMDG00005007757)	ENSMMDG00005008550	atp5f1b (ENSMMDG00005008559)	ENSMMDG00005008772	klhl41b (ENSMMDG00005008780)	oxgr1a.2 (ENSMMDG00005008782)	ENSMMDG00005008783	ENSMMDG00005008785	ENSMMDG00005008788	ENSMMDG00005008790	cldn10a (ENSMMDG00005008793)	abcc4 (ENSMMDG00005008910)	abcc4 (ENSMMDG00005017896)	timmdc1 (ENSMMDG00005017913)	poglut1 (ENSMMDG00005017914)	ENSMMDG00005017920 ##22	VANGL1 (ENSMMDG00005017927) ##23	ENSMMDG00005017931 ##24	ENSMMDG00005017933 ##27	ENSMMDG00005017978	ENSMMDG00005019773	ENSMMDG00005020982	MAP4K4 (ENSMMDG00005021003)	chst10 (ENSMMDG00005021433)	RPL31 (ENSMMDG00005021436)	zc3h13 (ENSMMDG00005021439)	cpb2 (ENSMMDG00005021445)	alg11 (ENSMMDG00005021449)	cpb2 (ENSMMDG00005021453)	spp2 (ENSMMDG00005021455)	raph1b (ENSMMDG00005021460)
Osteoglossiformes	ANCESTRAL SPECIES	249			ENSGT00940000164706.a	ENSGT00530000063970.f	ENSGT00520000055635.c.a.a.b	ENSGT00940000159755.a	ENSGT00940000156556.j #7	ENSGT00940000157784.c.a #8	ENSGT01050000244864.D.x #9	ENSGT01050000244864.C.e #12	ENSGT00940000158408.e #13	ENSGT00730000110915.b.k #14	ENSGT00940000157065.s	ENSGT00390000015060 #19	ENSGT00940000161679.b ##20	ENSGT00390000019377.b.c #22	ENSGT00390000012496.a.a #23	ENSGT00940000164480.b ##24	ENSGT00940000164480.a.b ##24	ENSGT00940000164246.C #27	ENSGT00940000166972 #29	ENSGT00940000155686	ENSGT00940000161651.a #30	ENSGT00940000162722 #31	ENSGT00950000182906.b.b.e #36	ENSGT01090000259985.b.b.a.b
Asian bonytongue	MODERN SPECIES	5	zgc:172122 (ENSSFOG00015031186)	ENSSFOG00015012379	gsk3ba (ENSSFOG00015025489)	GPR156 (ENSSFOG00015031034)	LRRC58 (ENSSFOG00015012285) #7	FSTL1 (ENSSFOG00015029425) #8	GJA8 (ENSSFOG00015012243) #9	ENSSFOG00015012226	gja5a (ENSSFOG00015012212) #12	acp6 (ENSSFOG00015012200) #13	bcl9 (ENSSFOG00015012144) #14	ENSSFOG00015012114	ITSN1 (ENSSFOG00015012013)	atp5po (ENSSFOG00015011974) #19	SLC5A3 (ENSSFOG00015011968) ##20	casq2 (ENSSFOG00015011933) #22	vangl1 (ENSSFOG00015011907) #23	ENSSFOG00015026468 ##24	ENSSFOG00015030074 #27	ENSSFOG00015011873	hpxa (ENSSFOG00015011844) #29	ENSSFOG00015011828	MX1 (ENSSFOG00015011797)	olig2 (ENSSFOG00015031376) #30	olig1 (ENSSFOG00015026710) #31	ENSSFOG00015011725 #33	ENSSFOG00015011715	stxbp5l (ENSSFOG00015011505) #36	ENSSFOG00015011461	gca (ENSSFOG00015011347)	KCNH7 (ENSSFOG00015011307)
P. kingsleyae	MODERN SPECIES	243	ENSPKIG00000010645	ENSPKIG00000010677	ENSPKIG00000010706	ENSPKIG00000010722	ENSPKIG00000010751	gsk3ba (ENSPKIG00000010801)	GPR156 (ENSPKIG00000010864)	LRRC58 (ENSPKIG00000010904) #7	fstl1a (ENSPKIG00000010945) #8	GJA5 (ENSPKIG00000010992) #12	acp6 (ENSPKIG00000011008) #13	bcl9 (ENSPKIG00000011043) #14	ITSN1 (ENSPKIG00000011093)	atp5po (ENSPKIG00000011154) #19	SLC5A3 (ENSPKIG00000011174) ##20	casq2 (ENSPKIG00000011189) #22	vangl1 (ENSPKIG00000011229) #23	ENSPKIG00000011253	ENSPKIG00000011268 ##24	ENSPKIG00000011276 #27	ENSPKIG00000011291 #29	hpxa (ENSPKIG00000011323) #29	ENSPKIG00000011367	ENSPKIG00000011405	ENSPKIG00000011430	ENSPKIG00000011460	olig2 (ENSPKIG00000011466) #30	olig1 (ENSPKIG00000011478) #31	ENSPKIG00000011496 #33	ENSPKIG00000011517 #33	stxbp5l (ENSPKIG00000011710) #36
Osteoglossiformes	ANCESTRAL SPECIES	32	ENSGT00940000158408.f #13	ENSGT00730000110915.b.l #14	ENSGT00940000177223	ENSGT00550000074968 #16	ENSGT00940000166160.lb #17	ENSGT00940000166160.mb #17	ENSGT00390000016421.b.a #18	ENSGT00510000046499	ENSGT00940000153577.A	ENSGT00390000013113	ENSGT00940000157065.t	ENSGT00940000161679.a #20	ENSGT00940000154497.B #21	ENSGT00390000013817	ENSGT00940000158283	ENSGT00390000019377.b.d #22	ENSGT00390000012496.a.b #23	ENSGT00940000164480.a.a #24	ENSGT00940000159415 #25	ENSGT00950000182936.a.a.a #26	ENSGT00940000159099.y	ENSGT00940000155116.a #28	ENSGT00940000164201.c.b.a
P. kingsleyae	MODERN SPECIES		chaf1b (ENSPKIG00000008763) #16	morc3a (ENSPKIG00000008698) #17	ENSPKIG00000008663 #17	ENSPKIG00000008629	ENSPKIG00000008611	ENSPKIG00000008578 #17	DOP1B (ENSPKIG00000008513) #18	cbr1 (ENSPKIG00000008486)	setd4 (ENSPKIG00000008446)	cryzl1 (ENSPKIG00000008403)	ITSN1 (ENSPKIG00000008328)	SLC5A3 (ENSPKIG00000008303) #20	KCNE2 (ENSPKIG00000008295) #21	timmdc1 (ENSPKIG00000008274)	poglut1 (ENSPKIG00000008240)	casq2 (ENSPKIG00000008192) #22	nhlh2 (ENSPKIG00000008164) #24	CNGA4 (ENSPKIG00000008075) #25	fhip1b (ENSPKIG00000008018) #26	ENSPKIG00000007993	ENSPKIG00000007981 #28	ENSPKIG00000007971	mxg (ENSPKIG00000007947)	gatd3 (ENSPKIG00000007897)	ercc1 (ENSPKIG00000007852) #32	rabl3 (ENSPKIG00000007818) #34	gtf2e1 (ENSPKIG00000007792) #35	stxbp5l (ENSPKIG00000007687) #36	slc10a2 (ENSPKIG00000007636)	efnb2b (ENSPKIG00000007603)	VGLL3 (ENSPKIG00000007578)
Spotted gar	MODERN SPECIES	655	gja5b (ENSLOCG00000017789) #10	acp6 (ENSLOCG00000006932) #13	bcl9 (ENSLOCG00000006913) #14	ENSLOCG00000006876 #15	chaf1b (ENSLOCG00000006847) #16	MORC3 (ENSLOCG00000006832)	DOP1B (ENSLOCG00000006795) #18	cbr1 (ENSLOCG00000006781)	setd4 (ENSLOCG00000006764)	cryzl1 (ENSLOCG00000006728)	ITSN1 (ENSLOCG00000006667)	atp5po (ENSLOCG00000006652) #19	KCNE2 (ENSLOCG00000017788) #21	timmdc1 (ENSLOCG00000006630)	poglut1 (ENSLOCG00000006595)	casq2 (ENSLOCG00000006580) #22	vangl1 (ENSLOCG00000006574) #23	nhlh2 (ENSLOCG00000017787) #24	CNGA4 (ENSLOCG00000006552) #25	fhip1b (ENSLOCG00000006531) #26	ENSLOCG00000006514	ENSLOCG00000006484 #28	ENSLOCG00000006464	ENSLOCG00000006439	ENSLOCG00000006389	MX1 (ENSLOCG00000006363)	gatd3 (ENSLOCG00000006346)	stxbp5l (ENSLOCG00000006301) #36	gtf2e1 (ENSLOCG00000006285) #35	rabl3 (ENSLOCG00000006265) #34	gzm3.4 (ENSLOCG00000006230) #33