Euteleostomi ANCESTRAL SPECIES 95 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000164480 #24 ENSGT00940000160364 ENSGT01050000244827.B ENSGT00940000154840.b ENSGT01030000235556 ENSGT01030000234540.E ENSGT00940000158367 ENSGT00940000155177.a ENSGT00940000155177.b ENSGT00940000162718 ENSGT00940000154334 ENSGT00940000157300 ENSGT00940000157498 ENSGT00940000158856 Actinopterygii ANCESTRAL SPECIES 78 ENSGT00940000177223 ENSGT00550000074968 #16 ENSGT00940000160495.a ENSGT00390000016421.b.a #18 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00390000013113 ENSGT00940000157065 ENSGT00390000015060 #19 ENSGT00940000161679 #20 ENSGT00940000154497.B #21 ENSGT00390000014606 ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000164480 #24 ENSGT00940000160364 ENSGT01050000244827.B ENSGT00940000154840.b ENSGT01030000235556 ENSGT01030000234540.E ENSGT00940000158367 ENSGT00940000155177.a ENSGT00940000155177.b ENSGT00940000162718 ENSGT00940000154334 ENSGT00940000157300 ENSGT00940000157498 ENSGT00940000158856 Neopterygii ANCESTRAL SPECIES 97 ENSGT00940000158408 #13 ENSGT00730000110915.b #14 ENSGT00940000177223 ENSGT00550000074968 #16 ENSGT00940000160495.a ENSGT00390000016421.b.a #18 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00390000013113 ENSGT00940000157065 ENSGT00390000015060 #19 ENSGT00940000161679 #20 ENSGT00940000154497.B #21 ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000164480 #24 ENSGT00940000159415 #25 ENSGT00950000182936.a.a.a #26 ENSGT00940000175622 ENSGT00390000003706.a.a ENSGT00940000165064 ENSGT00390000008694.b.b ENSGT00940000159105 ENSGT01030000234527.A.a.b.a.a ENSGT00390000013415.a.b ENSGT00950000182864.a.b.b.a.a ENSGT00940000154909.a ENSGT00940000154909.b ENSGT00940000166792 Osteoglossocephalai ANCESTRAL SPECIES 53 ENSGT00730000110915.b #14 ENSGT00900000141090 #15 ENSGT00550000074968 #16 ENSGT00940000166160 #17 ENSGT00390000016421.b.a #18 ENSGT00510000046499 ENSGT00940000153577.A ENSGT00390000013113 ENSGT00940000157065 ENSGT00390000015060 #19 ENSGT00940000161679.a #20 ENSGT00940000154497.B #21 ENSGT00390000013817 ENSGT00940000158283 ENSGT00940000161679.b ##20 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000164480.a.a #24 ENSGT00940000159415 #25 ENSGT00950000182936.a.a.a #26 ENSGT00940000175622 ENSGT00390000003706.a.a ENSGT00940000161651 #30 ENSGT00940000162722 #31 ENSGT00390000011275 #32 ENSGT00910000144271.C #33 ENSGT00390000007467 #34 ENSGT00390000016696 #35 ENSGT00950000182906.b.b #36 ENSGT01090000259985.b.b.a.a ENSGT01090000259985.b.b.a.b Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 23 ENSGT00940000156556.h #7 ENSGT00940000157784.c.d #8 ENSGT01050000244864.D #9 ENSGT01050000244864.C.f #10 ENSGT01090000260658 #11 ENSGT01050000244864.C.e #12 ENSGT00940000158408 #13 ENSGT00730000110915.b #14 ENSGT00900000141090 #15 ENSGT00550000074968 #16 ENSGT00940000166160 #17 ENSGT00390000016421.b.a #18 ENSGT00390000015060 #19 ENSGT00940000161679.a #20 ENSGT00940000154497.B #21 ENSGT00390000019377.b.f #22 ENSGT00390000012496.a.d #23 ENSGT00940000164480.a.a #24 ENSGT00940000159415 #25 ENSGT00950000182936.a.a.a #26 ENSGT00940000164246.C.d.a #27 ENSGT00940000155116.a #28 ENSGT00940000166972 #29 ENSGT00940000161651 #30 ENSGT00940000162722 #31 ENSGT00390000011275 #32 ENSGT00910000144271.C #33 ENSGT00390000007467 #34 ENSGT00390000016696 #35 ENSGT00950000182906.b.b #36 ENSGT00940000158318 #37 Cyprininae ANCESTRAL SPECIES 263 ENSGT00390000016421.b.a.d #18 ENSGT00390000015060.fb #19 ENSGT00940000161679.a.c #20 ENSGT00390000019377.b.f.a #22 ENSGT00940000161814.g.a.d.c.b.a.a.a.a ENSGT00940000162818.c.a.g.a.c ENSGT00390000012496.a.d.d #23 ENSGT00940000164480.a.a.b #24 ENSGT00940000159415 #25 ENSGT00950000182936.a.a.a.c #26 ENSGT00940000164246.C.d.a.c #27 ENSGT00940000164201.d.a.b ENSGT00390000003706.a.a.s.b ENSGT00940000161651.c #30 ENSGT00940000162722.b #31 ENSGT00910000144271.C.db.a.a.b.b #33 ENSGT00390000007467.i #34 ENSGT00940000155792.f ENSGT00390000008096.B.e.a.a Goldfish MODERN SPECIES 49 man1a2 (ENSCARG00000014239) ENSCARG00000014214 gdap2 (ENSCARG00000014163) wdr3 (ENSCARG00000014094) tbx15 (ENSCARG00000014064) wars2 (ENSCARG00000014048) klf12b (ENSCARG00000014034) KLF5 (ENSCARG00000014027) usp9 (ENSCARG00000013860) ENSCARG00000013804 ENSCARG00000013803 ENSCARG00000013799 ENSCARG00000013794 atp5po (ENSCARG00000013775) #19 SLC5A3 (ENSCARG00000013773) #20 casq2 (ENSCARG00000012415) #22 ENSCARG00000012329 ENSCARG00000044544 ENSCARG00000044526 vangl1 (ENSCARG00000044505) #23 nhlh2 (ENSCARG00000044497) #24 ENSCARG00000044444 #25 fhip1b (ENSCARG00000044412) #26 ENSCARG00000044388 ENSCARG00000044375 #28 hpxa (ENSCARG00000044080) #29 gatd3 (ENSCARG00000044039) olig2 (ENSCARG00000044031) #30 olig1 (ENSCARG00000044014) #31 ENSCARG00000043959 #33 ENSCARG00000043920 #33 Common carp reference MODERN SPECIES 46 GPR82 (ENSCCRG00000078751) gpr34b (ENSCCRG00000078366) caska (ENSCCRG00000062836) nyx (ENSCCRG00000014039) ddx3xa (ENSCCRG00000065876) rpl8 (ENSCCRG00000055439) usp9 (ENSCCRG00000028441) ENSCCRG00000081306 ENSCCRG00000013983 ENSCCRG00000068974 ENSCCRG00000011643 ENSCCRG00000078187 ENSCCRG00000040647 #18 atp5po (ENSCCRG00000002434) #19 ENSCCRG00000076861 #20 casq2 (ENSCCRG00000025811) #22 ENSCCRG00000082260 ENSCCRG00000005987 ENSCCRG00000023493 vangl1 (ENSCCRG00000082261) #23 nhlh2 (ENSCCRG00000062686) #24 ENSCCRG00000010691 #25 fhip1b (ENSCCRG00000010687) #26 ENSCCRG00000010686 #27 ENSCCRG00000053552 #28 gatd3 (ENSCCRG00000059500) ENSCCRG00000061176 #30 olig1 (ENSCCRG00000070193) #31 ENSCCRG00000071698 ENSCCRG00000029032 ENSCCRG00000050423 #33 Bicolor damselfish MODERN SPECIES 292 gja5a (ENSSPAG00000006808) #12 acp6 (ENSSPAG00000006814) #13 bcl9 (ENSSPAG00000006843) #14 ENSSPAG00000006866 #15 chaf1b (ENSSPAG00000006887) #16 morc3a (ENSSPAG00000006940) #17 DOP1B (ENSSPAG00000006986) #18 SLC5A3 (ENSSPAG00000007099) #20 KCNE2 (ENSSPAG00000007102) #21 casq2 (ENSSPAG00000007124) #22 vangl1 (ENSSPAG00000007172) #23 nhlh2 (ENSSPAG00000007338) #24 nqo1 (ENSSPAG00000007347) ackr3a (ENSSPAG00000007360) rpe (ENSSPAG00000007370) igsf3 (ENSSPAG00000007404) igsf3l (ENSSPAG00000007418) klhl6 (ENSSPAG00000007437) ANOS1 (ENSSPAG00000007470) tbl1x (ENSSPAG00000007535) GPR143 (ENSSPAG00000007624) ENSSPAG00000007649 mospd2 (ENSSPAG00000007669) ENSSPAG00000007738 glra2 (ENSSPAG00000007787) Sailfin molly MODERN SPECIES 230 ENSPLAG00000008243 ENSPLAG00000008228 chaf1b (ENSPLAG00000008208) #16 ENSPLAG00000008174 ENSPLAG00000008163 #17 DOP1B (ENSPLAG00000008156) #18 ENSPLAG00000008093 #18 SLC5A3 (ENSPLAG00000008080) #20 casq2 (ENSPLAG00000008074) #22 vangl1 (ENSPLAG00000008041) #23 ENSPLAG00000008011 ENSPLAG00000007997 ackr3a (ENSPLAG00000000170) rpe (ENSPLAG00000007977) igsf3 (ENSPLAG00000007957) ENSPLAG00000007902 klhl6 (ENSPLAG00000007830) Oryzias_b ANCESTRAL SPECIES 10 ENSGT00940000159755 ENSGT01040000240385.A.b.b.a.b.a.a.b.b ENSGT00940000156556.g ##7 ENSGT00940000157784.c.c ##8 ENSGT00940000164822.i.a ENSGT00940000175300 ENSGT01050000244864.D #9 ENSGT01050000244864.C.e #12 ENSGT00940000158408 #13 ENSGT00730000110915.b #14 ENSGT00940000177223 ENSGT00550000074968 #16 ENSGT00940000166160.i #17 ENSGT00390000016421.b.a.r #18 ENSGT00940000161679.a #20 ENSGT00390000019377.b.f #22 ENSGT00940000166160.j #17 ENSGT00390000012496.a.d #23 ENSGT00940000156563.b.m ENSGT01090000260051.b.b.dc.b ENSGT00390000001447.ec ENSGT00940000155177.b ENSGT00940000155177.a ENSGT00940000163715.a ENSGT01030000234540.A.b ENSGT00440000033720.a.a.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000165059.A ENSGT00390000016713 ENSGT00390000009885 Oryzias_a ANCESTRAL SPECIES 21 ENSGT00940000159755 ENSGT00940000156556.g ##7 ENSGT00940000157784.c.c ##8 ENSGT00940000164822.i.a.a.a.a.a.a ENSGT00940000164822.j ENSGT01050000244864.D #9 ENSGT01030000235357.b.b.b ENSGT01050000244864.C.e #12 ENSGT00940000158408 #13 ENSGT00730000110915.b #14 ENSGT00940000177223 ENSGT00550000074968 #16 ENSGT00940000166160 #17 ENSGT00390000016421.b.a.q #18 ENSGT00940000161679.a #20 ENSGT00390000019377.b.f #22 ENSGT00390000012496.a.d #23 ENSGT00940000156563.b.m ENSGT00940000159150 ENSGT01090000260051.b.b.dc.b ENSGT00390000001447.ec ENSGT00940000155177.b ENSGT00940000155177.a ENSGT00940000163715.a ENSGT01030000234540.A.b ENSGT00440000033720.a.a.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000165059.A ENSGT00390000016713 ENSGT00390000009885 Eupecaria_B ANCESTRAL SPECIES 18 ENSGT00940000157784.c.c ##8 ENSGT00940000178262 ENSGT00940000175300 ENSGT00940000164822 ENSGT01050000244864.D #9 ENSGT01090000260658 #11 ENSGT01050000244864.C.e #12 ENSGT00940000158408 #13 ENSGT00730000110915.b #14 ENSGT00940000177223 ENSGT00550000074968 #16 ENSGT00940000166160 #17 ENSGT00390000016421.b.a #18 ENSGT00940000161679.a #20 ENSGT00940000154497.B #21 ENSGT00390000019377.b.f #22 ENSGT00390000012496.a.d #23 ENSGT00940000164480.a.a #24 ENSGT00940000156563.b ENSGT00940000159150 ENSGT01090000260051.b.b.dc.b ENSGT00390000001447.ec ENSGT00940000155177.b ENSGT00940000155177.a ENSGT00940000163715.a ENSGT00980000198755 ENSGT01030000234540.A.b ENSGT00440000033720.a.a.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000165059.A River trout MODERN SPECIES 12 fstl1b (ENSSTUG00000008997) ##8 ENSSTUG00000008971 ENSSTUG00000008939 gja8a (ENSSTUG00000008930) #9 gja5a (ENSSTUG00000008924) #12 acp6 (ENSSTUG00000008881) #13 BCL9 (ENSSTUG00000008851) #14 ENSSTUG00000008839 chaf1b (ENSSTUG00000008809) #16 ENSSTUG00000008794 #17 DOP1B (ENSSTUG00000008450) #18 ENSSTUG00000008355 atp5po (ENSSTUG00000008290) #19 SLC5A3 (ENSSTUG00000008284) #20 KCNE2 (ENSSTUG00000008281) #21 casq2 (ENSSTUG00000008199) #22 vangl1 (ENSSTUG00000008184) #23 nhlh2 (ENSSTUG00000008174) #24 NQO1 (ENSSTUG00000007984) ackr3a (ENSSTUG00000007974) ENSSTUG00000007960 igsf3 (ENSSTUG00000007941) ENSSTUG00000007927 klhl6 (ENSSTUG00000007918) ENSSTUG00000007876 ANOS1 (ENSSTUG00000007800) tbl1x (ENSSTUG00000007698) GPR143 (ENSSTUG00000007687) ENSSTUG00000007673 mospd2 (ENSSTUG00000007058) ENSSTUG00000007030 Oncorhynchus ANCESTRAL SPECIES 13 ENSGT00940000156556.g.h ##7 ENSGT00940000157784.c.c.c ##8 ENSGT00940000164822.db.b ENSGT01050000244864.D.s.a #9 ENSGT01050000244864.C.e.e #12 ENSGT00940000158408.l #13 ENSGT00730000110915.b.d.a #14 ENSGT00940000177223.a ENSGT00550000074968.j #16 ENSGT00940000166160.ab.b #17 ENSGT00390000016421.b.a.f #18 ENSGT00510000046499.r.b ENSGT00390000015060.kb.a.a #19 ENSGT00940000161679.a.f #20 ENSGT00940000154497.B.i #21 ENSGT00390000019377.b.f.g #22 ENSGT00390000012496.a.d.a #23 ENSGT00940000164480.a.a.h.b #24 ENSGT00940000156563.b.ab ENSGT01090000260051.b.b.dc.b.h ENSGT00390000001447.ec.a.a ENSGT00940000155177.b.e ENSGT00940000155177.a.l ENSGT00940000163715.a ENSGT01030000235037.d ENSGT00440000033720.a.a.a.b ENSGT00940000153421.a.a.a.a.b.m ENSGT00390000016722.f ENSGT00940000165059.A.i.a.a ENSGT00390000016713.g.a ENSGT00390000009885 Coho salmon MODERN SPECIES 11 fstl1b (ENSOKIG00005027149) ##8 ENSOKIG00005003184 ENSOKIG00005003158 gja8a (ENSOKIG00005003143) #9 gja5a (ENSOKIG00005003140) #12 acp6 (ENSOKIG00005003128) #13 BCL9 (ENSOKIG00005003117) #14 ENSOKIG00005003113 chaf1b (ENSOKIG00005003095) #16 morc3a (ENSOKIG00005003070) #17 DOP1B (ENSOKIG00005002981) #18 ENSOKIG00005002939 atp5po (ENSOKIG00005002927) #19 SLC5A3 (ENSOKIG00005002922) #20 KCNE2 (ENSOKIG00005002916) #21 casq2 (ENSOKIG00005002871) #22 vangl1 (ENSOKIG00005002850) #23 nhlh2 (ENSOKIG00005002843) #24 ENSOKIG00005002834 ackr3a (ENSOKIG00005002827) rpe (ENSOKIG00005002820) IGSF3 (ENSOKIG00005002805) ENSOKIG00005002781 ENSOKIG00005002758 ENSOKIG00005002750 ENSOKIG00005002745 ANOS1 (ENSOKIG00005002713) tbl1x (ENSOKIG00005002621) GPR143 (ENSOKIG00005002594) ENSOKIG00005002582 mospd2 (ENSOKIG00005002553) Clupeocephala ANCESTRAL SPECIES 432 ENSGT00390000013817 ENSGT00940000158283 ENSGT00940000172275 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C.d.b ##27 ENSGT00390000009178 Mexicana tetra MODERN SPECIES 3 lig4 (ENSAMXG00000008192) NALF1 (ENSAMXG00000039067) ENSAMXG00000038840 cckbra (ENSAMXG00000008203) ENSAMXG00000031145 ENSAMXG00000035162 ENSAMXG00000030058 MAP4K4 (ENSAMXG00000005146) ENSAMXG00000005176 chst10 (ENSAMXG00000033225) ENSAMXG00000029524 zgc:64002 (ENSAMXG00000043311) zgc:172295 (ENSAMXG00000005230) timmdc1 (ENSAMXG00000043134) poglut1 (ENSAMXG00000040520) CASQ2 (ENSAMXG00000038552) ##22 VANGL1 (ENSAMXG00000005275) ##23 ENSAMXG00000026006 ##24 ENSAMXG00000037151 ##27 ENSAMXG00000005283 #29 ENSAMXG00000026007 ENSAMXG00000026008 ENSAMXG00000033746 ENSAMXG00000033179 ENSAMXG00000029398 ENSAMXG00000005320 ENSAMXG00000005333 ENSAMXG00000043665 tsga10 (ENSAMXG00000005345) slkb (ENSAMXG00000005356) ENSAMXG00000031571 Cyprinoidei ANCESTRAL SPECIES 22 ENSGT00390000008490 ENSGT00940000154989 ENSGT00940000160159 ENSGT00510000047027.c.a ENSGT00950000183152.B.c.a ENSGT00390000013608 ENSGT00390000006915.c.c.a ENSGT00940000158619.p ENSGT00940000162067 ENSGT00980000198599 ENSGT00550000074981 ENSGT00390000011708.a ENSGT01000000214434.B.a.a.a ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00980000198666 ENSGT00390000009178 ENSGT01090000260082.d.a.b Euteleosteomorpha ANCESTRAL SPECIES 124 ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT01090000260278 ENSGT00940000158859.f ENSGT01030000234621.F.c ENSGT00950000183071.a.a.a.e.b ENSGT00940000160898 ENSGT00940000158655.e ENSGT00940000160749.b ENSGT00940000155232.t.a.b.b ENSGT00940000156862 ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C.d.b ##27 ENSGT00390000009178 ENSGT00940000155107.b.a ENSGT00940000155063.a.b Northern pike MODERN SPECIES 21 ENSELUG00000008611 gna11b (ENSELUG00000008649) TLE5 (ENSELUG00000028407) PLPP2 (ENSELUG00000025589) theg (ENSELUG00000027610) shda (ENSELUG00000008738) yju2 (ENSELUG00000008776) ebi3 (ENSELUG00000008819) odf3l2a (ENSELUG00000008837) crlf1a (ENSELUG00000008880) keap1a (ENSELUG00000008917) SSBP4 (ENSELUG00000008998) ENSELUG00000009064 ENSELUG00000009037 poglut1 (ENSELUG00000009087) ENSELUG00000009144 ##22 VANGL1 (ENSELUG00000009195) ##23 ENSELUG00000009208 #24 ENSELUG00000009243 tlr22 (ENSELUG00000009256) ENSELUG00000009290 ENSELUG00000009319 MAP4K4 (ENSELUG00000009520) ENSELUG00000009573 atg9a (ENSELUG00000009602) ENSELUG00000009709 ENSELUG00000001518 TSPEAR (ENSELUG00000009812) ENSELUG00000009935 ENSELUG00000009974 ENSELUG00000010433 Cyprinodontiformes ANCESTRAL SPECIES 25 ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT00940000158859.f ENSGT01030000234621.F.c ENSGT00950000183071.a.a.a.e.b ENSGT00940000156862 ENSGT00940000155232.t.a.b.b ENSGT00940000166422 ENSGT00940000155232.t.b.a ENSGT00940000153931.b.b.c ENSGT00940000153931.b.b.d ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C.d.b ##27 ENSGT00390000009178 ENSGT01050000244864.B.b.a.a ##9 ENSGT01030000234513.B.b.d ENSGT00980000199433 ENSGT00390000003152 ENSGT00390000005163 ENSGT00940000157901 ENSGT00390000018436.b.m.b ENSGT00990000203744.b ENSGT01050000244902.b.c.a.a ENSGT00390000006080 ENSGT00940000153986.a Cyprinodontoidei ANCESTRAL SPECIES 26 ENSGT00940000157564 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT00940000158859.f ENSGT01030000234621.F.c ENSGT00950000183071.a.a.a.e.b ENSGT00940000156862 ENSGT00940000155232.t.a.b.b ENSGT00940000166422 ENSGT00940000155232.t.b.a ENSGT00940000153931.b.b.c ENSGT00940000153931.b.b.d ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C.d.b ##27 ENSGT00390000009178 ENSGT01050000244864.B.b.a.a ##9 ENSGT01030000234513.B.b.d ENSGT00980000199433 ENSGT00390000003152 ENSGT00390000005163 ENSGT00940000157901 ENSGT00390000018436.b.m.b ENSGT00990000203744.b ENSGT01050000244902.b.c.a.a ENSGT00390000006080 ENSGT00940000153986.a Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00940000158665.d ENSGT00550000074800.a.b ENSGT00940000163195.B.a ENSGT01090000260278 ENSGT00940000158859.f ENSGT01030000234621.F.c ENSGT00950000183071.a.a.a.e.b ENSGT00940000156862 ENSGT00940000155232.t.a.b.b ENSGT00940000166422 ENSGT00940000155232.t.b.a ENSGT00940000153931.b.b.c ENSGT00940000153931.b.b.d ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C.d.b ##27 ENSGT00390000009178 ENSGT01050000244864.B.b.a.a ##9 ENSGT01030000234513.B.b.d ENSGT00390000003152 ENSGT00390000005163 ENSGT00940000157901 ENSGT00990000203744.b ENSGT01050000244902.b.c.a.a ENSGT00390000006080 ENSGT00940000153986.a ENSGT00940000158446 ENSGT00940000161407.b Zig-zag eel MODERN SPECIES 11 ENSMAMG00000005123 EN1 (ENSMAMG00000005134) C1QL2 (ENSMAMG00000027618) STEAP3 (ENSMAMG00000005197) DBI (ENSMAMG00000005224) ENSMAMG00000005413 ENSMAMG00000026028 ENSMAMG00000005549 GABRG3 (ENSMAMG00000005586) ENSMAMG00000005619 GABRB3 (ENSMAMG00000005647) ENSMAMG00000005832 ENSMAMG00000005860 ENSMAMG00000005967 ENSMAMG00000005984 ENSMAMG00000006029 ##22 ENSMAMG00000006057 ##23 ENSMAMG00000006165 ##24 ENSMAMG00000027216 ENSMAMG00000006189 ENSMAMG00000006240 ##9 ENSMAMG00000007790 ENSMAMG00000027682 rtraf (ENSMAMG00000027471) NID2 (ENSMAMG00000008242) ENSMAMG00000028696 ptger2a (ENSMAMG00000027924) TXNDC16 (ENSMAMG00000008377) gpr137c (ENSMAMG00000008405) ENSMAMG00000008443 irs2a (ENSMAMG00000008464) Tetraodontidae ANCESTRAL SPECIES 22 ENSGT00940000161407.b ENSGT00940000158446 ENSGT00940000153986.a ENSGT00390000006080 ENSGT01050000244902.b.c.a.a ENSGT00940000157901 ENSGT00390000005163 ENSGT00390000003152 ENSGT01030000234513.B.b.d ENSGT01050000244864.B.b.a.a ##9 ENSGT00940000155232.t.b.a ENSGT00940000153931.b.b.c ENSGT00940000153931.b.b.d ENSGT00390000013817 ENSGT00940000158283 ENSGT00390000019377.b.e ##22 ENSGT00390000012496.a.c ##23 ENSGT00940000164480.a.b ##24 ENSGT00390000009178 ENSGT00940000154342.C ENSGT00530000063484.b.b.d.b ENSGT00390000003758 ENSGT00940000153534.A ENSGT00930000150950.b ENSGT00390000005530.a.a ENSGT00950000183046.a.a.gb ENSGT00940000156449.b.a ENSGT00940000155972.A ENSGT00940000155995.e.a ENSGT00940000153476.b.o.b ENSGT00940000156972.d Osteoglossiformes ANCESTRAL SPECIES 249 ENSGT00940000164706.a ENSGT00530000063970.f ENSGT00520000055635.c.a.a.b ENSGT00940000159755.a ENSGT00940000156556.j #7 ENSGT00940000157784.c.a #8 ENSGT01050000244864.D.x #9 ENSGT01050000244864.C.e #12 ENSGT00940000158408.e #13 ENSGT00730000110915.b.k #14 ENSGT00940000157065.s ENSGT00390000015060 #19 ENSGT00940000161679.b ##20 ENSGT00390000019377.b.c #22 ENSGT00390000012496.a.a #23 ENSGT00940000164480.b ##24 ENSGT00940000164480.a.b ##24 ENSGT00940000164246.C #27 ENSGT00940000166972 #29 ENSGT00940000155686 ENSGT00940000161651.a #30 ENSGT00940000162722 #31 ENSGT00950000182906.b.b.e #36 ENSGT01090000259985.b.b.a.b Sauria ANCESTRAL SPECIES 2 ENSGT00390000007133 ENSGT00940000157784 #8 ENSGT00940000156556 #7 ENSGT00940000159755 ENSGT00520000055635.c.a ENSGT00390000003024 ENSGT00390000002329 ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00510000049596 ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000159402 ENSGT00940000166284 ENSGT00390000018895.a ENSGT00940000158378 ENSGT00940000166068 ENSGT00940000165782 ENSGT00940000159458 ENSGT00940000160779 ENSGT00940000154487.A ENSGT00940000156392.a ENSGT00940000165328 ENSGT00940000158516 ENSGT01030000235231 ENSGT00730000111265 Duck MODERN SPECIES HGD (ENSAPLG00000006938) NDUFB4 (ENSAPLG00000017845) FSTL1 (ENSAPLG00000027059) #8 LRRC58 (ENSAPLG00000029420) #7 GPR156 (ENSAPLG00000019941) GSK3B (ENSAPLG00000007990) CFAP91 (ENSAPLG00000011017) ENSAPLG00000011097 POPDC2 (ENSAPLG00000019599) PLA1A (ENSAPLG00000025714) ENSAPLG00000011249 ATP1A1 (ENSAPLG00000011285) MAB21L3 (ENSAPLG00000012622) SLC22A15 (ENSAPLG00000012634) NHLH2 (ENSAPLG00000023891) CASQ2 (ENSAPLG00000011267) #22 VANGL1 (ENSAPLG00000011029) #23 CHD1L (ENSAPLG00000009976) ENSAPLG00000009803 TMEM39A (ENSAPLG00000009675) B4GALT4 (ENSAPLG00000009388) ENSAPLG00000009258 ENSAPLG00000025438 ARHGAP31 (ENSAPLG00000009089) UPK1B (ENSAPLG00000008825) IGSF11 (ENSAPLG00000008337) LSAMP (ENSAPLG00000010325) GAP43 (ENSAPLG00000002345) ENSAPLG00000028503 ZBTB20 (ENSAPLG00000002762) DRD3 (ENSAPLG00000002289) Pink-footed goose MODERN SPECIES 5 HGD (ENSABRG00000010377) NDUFB4 (ENSABRG00000010370) FSTL1 (ENSABRG00000010360) #8 LRRC58 (ENSABRG00000010349) #7 GPR156 (ENSABRG00000010338) ENSABRG00000010329 GSK3B (ENSABRG00000010305) CFAP91 (ENSABRG00000010269) ENSABRG00000010266 POPDC2 (ENSABRG00000010264) PLA1A (ENSABRG00000010260) ENSABRG00000010256 ATP1A1 (ENSABRG00000010220) SLC22A15 (ENSABRG00000010193) NHLH2 (ENSABRG00000010180) CASQ2 (ENSABRG00000010169) #22 VANGL1 (ENSABRG00000010157) #23 CHD1L (ENSABRG00000010095) ENSABRG00000010067 TMEM39A (ENSABRG00000010057) B4GALT4 (ENSABRG00000010048) ENSABRG00000010037 ENSABRG00000010033 ARHGAP31 (ENSABRG00000010024) UPK1B (ENSABRG00000009963) ENSABRG00000009952 IGSF11 (ENSABRG00000009943) LSAMP (ENSABRG00000009862) ENSABRG00000009850 GAP43 (ENSABRG00000009848) ZBTB20 (ENSABRG00000009810) Toxicofera ANCESTRAL SPECIES 6 ENSGT00390000007467 #34 ENSGT00390000004601 ENSGT00390000007133 ENSGT00940000157784 #8 ENSGT00940000156556 #7 ENSGT00940000159755 ENSGT00520000055635.c.a ENSGT00390000003024 ENSGT00940000164584 ENSGT00390000002563.b.a.b ENSGT00940000159279 ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000159402 ENSGT00940000166284 ENSGT00390000018895.a ENSGT00940000153481.C ENSGT00950000183130.B ENSGT00390000013549.a.a ENSGT00530000063860.b ENSGT01060000248594.e.b ENSGT00940000156876 ENSGT00730000111328 ENSGT00940000161796 ENSGT00390000002109 ENSGT00940000156612 ENSGT00940000158731 Mammalia ANCESTRAL SPECIES 69 ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000164746 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00510000049596 ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00940000158283 ENSGT00390000013817 ENSGT00940000162632 ENSGT00530000063627.b ENSGT00940000159279 ENSGT00390000002563.b.a.b ENSGT00390000002329 ENSGT00390000003024 ENSGT00940000161118 ENSGT00520000055635.c.a ENSGT00940000159755 ENSGT00940000156556 #7 ENSGT00940000157784 #8 ENSGT00390000007133 Sperm whale MODERN SPECIES 15 GDAP2 (ENSPCTG00005017454) TENT5C (ENSPCTG00005017545) MAN1A2 (ENSPCTG00005017570) VTCN1 (ENSPCTG00005017689) TRIM45 (ENSPCTG00005017746) TTF2 (ENSPCTG00005017917) ENSPCTG00005017986 CD101 (ENSPCTG00005018027) PTGFRN (ENSPCTG00005018118) CD2 (ENSPCTG00005018150) IGSF3 (ENSPCTG00005018364) CD58 (ENSPCTG00005018443) ATP1A1 (ENSPCTG00005018474) SLC22A15 (ENSPCTG00005018619) NHLH2 (ENSPCTG00005000232) CASQ2 (ENSPCTG00005000263) #22 VANGL1 (ENSPCTG00005000293) #23 NGF (ENSPCTG00005000314) TSPAN2 (ENSPCTG00005000352) TSHB (ENSPCTG00005000377) ENSPCTG00005000393 ENSPCTG00005000403 SYCP1 (ENSPCTG00005000455) ENSPCTG00005000610 ENSPCTG00005000620 ENSPCTG00005000637 ENSPCTG00005000647 SIKE1 (ENSPCTG00005000661) CSDE1 (ENSPCTG00005000733) ENSPCTG00005001006 ENSPCTG00005001015 Arabian camel MODERN SPECIES 35 WDR3 (ENSCDRG00005003128) GDAP2 (ENSCDRG00005003149) TENT5C (ENSCDRG00005003158) MAN1A2 (ENSCDRG00005003168) VTCN1 (ENSCDRG00005003199) TRIM45 (ENSCDRG00005003250) ENSCDRG00005003266 CD101 (ENSCDRG00005003285) PTGFRN (ENSCDRG00005003307) CD2 (ENSCDRG00005003335) IGSF3 (ENSCDRG00005003359) ENSCDRG00005003393 ATP1A1 (ENSCDRG00005003442) MAB21L3 (ENSCDRG00005003501) SLC22A15 (ENSCDRG00005003542) CASQ2 (ENSCDRG00005003648) #22 VANGL1 (ENSCDRG00005003686) #23 NGF (ENSCDRG00005003718) TSPAN2 (ENSCDRG00005003772) TSHB (ENSCDRG00005003878) SYCP1 (ENSCDRG00005003944) ENSCDRG00005004390 SIKE1 (ENSCDRG00005004534) ENSCDRG00005004604 NRAS (ENSCDRG00005004935) AMPD1 (ENSCDRG00005004958) DENND2C (ENSCDRG00005005062) BCAS2 (ENSCDRG00005005135) TRIM33 (ENSCDRG00005005176) SYT6 (ENSCDRG00005005375) OLFML3 (ENSCDRG00005005451) Canidae ANCESTRAL SPECIES 25 ENSGT00940000157498 ENSGT00950000185047.a.a ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000164746 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00510000049596 ENSGT00940000154840.b ENSGT00390000013931.a.a.a.a ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00940000163318 ENSGT00940000154158.l.c.a ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947.g.a ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000155712.g.b.a Euarchontoglires ANCESTRAL SPECIES ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000162718 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00510000049596 ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00940000163318 ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Cercopithecidae ANCESTRAL SPECIES 2 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300.c ENSGT00940000154334.k ENSGT00940000162718 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00510000049596 ENSGT00940000153362.b.g ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00390000008859.b.d.k.a.a ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Capuchin MODERN SPECIES 32 TENT5C (ENSCCAG00000020387) MAN1A2 (ENSCCAG00000034354) VTCN1 (ENSCCAG00000037336) TRIM45 (ENSCCAG00000010371) TTF2 (ENSCCAG00000032675) CD101 (ENSCCAG00000037110) PTGFRN (ENSCCAG00000034342) ENSCCAG00000037368 CD2 (ENSCCAG00000036008) IGSF3 (ENSCCAG00000035554) CD58 (ENSCCAG00000024820) ATP1A1 (ENSCCAG00000036026) MAB21L3 (ENSCCAG00000018744) SLC22A15 (ENSCCAG00000030828) NHLH2 (ENSCCAG00000017644) CASQ2 (ENSCCAG00000012372) #22 VANGL1 (ENSCCAG00000032113) #23 NGF (ENSCCAG00000020128) TSPAN2 (ENSCCAG00000035942) TSHB (ENSCCAG00000029875) SYCP1 (ENSCCAG00000034214) ENSCCAG00000026846 SIKE1 (ENSCCAG00000036846) ENSCCAG00000036794 NRAS (ENSCCAG00000030765) AMPD1 (ENSCCAG00000021136) DENND2C (ENSCCAG00000021424) ENSCCAG00000021894 TRIM33 (ENSCCAG00000031560) SYT6 (ENSCCAG00000037943) OLFML3 (ENSCCAG00000034108) Marmoset MODERN SPECIES 19 VTCN1 (ENSCJAG00000005878) TRIM45 (ENSCJAG00000005897) TTF2 (ENSCJAG00000005909) CD101 (ENSCJAG00000005944) PTGFRN (ENSCJAG00000005961) CD2 (ENSCJAG00000062649) IGSF3 (ENSCJAG00000006006) ENSCJAG00000006049 ENSCJAG00000071790 ATP1A1 (ENSCJAG00000006058) ENSCJAG00000071068 ENSCJAG00000075676 MAB21L3 (ENSCJAG00000006194) SLC22A15 (ENSCJAG00000012813) NHLH2 (ENSCJAG00000079748) CASQ2 (ENSCJAG00000012776) #22 VANGL1 (ENSCJAG00000012756) #23 NGF (ENSCJAG00000070914) TSHB (ENSCJAG00000059226) TSPAN2 (ENSCJAG00000046657) SYCP1 (ENSCJAG00000012678) SIKE1 (ENSCJAG00000012663) CSDE1 (ENSCJAG00000012565) NRAS (ENSCJAG00000036517) AMPD1 (ENSCJAG00000012494) DENND2C (ENSCJAG00000012467) BCAS2 (ENSCJAG00000012448) TRIM33 (ENSCJAG00000012339) SYT6 (ENSCJAG00000012333) ENSCJAG00000074095 ENSCJAG00000041494 Lemuriformes ANCESTRAL SPECIES ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000162718 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00510000049596 ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368 ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 ENSGT00940000155356 Cricetinae ANCESTRAL SPECIES 12 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000165376 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368.d ENSGT00940000163318 ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Murinae ANCESTRAL SPECIES 5 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00940000157498 ENSGT00940000157300 ENSGT00940000154334.k ENSGT00940000162718 ENSGT00940000161722 ENSGT00940000158367 ENSGT01030000234540.E ENSGT00940000155177.b ENSGT00940000154840.b ENSGT01050000244827.B ENSGT00940000160364 ENSGT00940000162602 ENSGT00390000019377.b #22 ENSGT00390000012496.a #23 ENSGT00390000007725.A.b ENSGT00940000157504 ENSGT00940000158152 ENSGT00390000003368.d ENSGT00940000163318 ENSGT00390000018003.a ENSGT00390000016950 ENSGT00940000158947 ENSGT00950000183011.c.a.a ENSGT00950000182931.B.a.b ENSGT00390000014494 ENSGT00940000156361.B ENSGT00940000157665 ENSGT00940000158083 Long-tailed chinchilla MODERN SPECIES 142 GDAP2 (ENSCLAG00000008843) ENSCLAG00000007247 TENT5C (ENSCLAG00000006985) MAN1A2 (ENSCLAG00000008573) VTCN1 (ENSCLAG00000014982) TRIM45 (ENSCLAG00000010898) ENSCLAG00000014230 CD101 (ENSCLAG00000010019) PTGFRN (ENSCLAG00000008229) CD2 (ENSCLAG00000007838) IGSF3 (ENSCLAG00000006923) ATP1A1 (ENSCLAG00000005733) MAB21L3 (ENSCLAG00000004428) SLC22A15 (ENSCLAG00000006619) NHLH2 (ENSCLAG00000005691) CASQ2 (ENSCLAG00000007972) #22 VANGL1 (ENSCLAG00000006270) #23 NGF (ENSCLAG00000004815) TSPAN2 (ENSCLAG00000007865) TSHB (ENSCLAG00000011105) ENSCLAG00000004900 ENSCLAG00000013132 ENSCLAG00000006997 SIKE1 (ENSCLAG00000005344) CSDE1 (ENSCLAG00000006618) NRAS (ENSCLAG00000005888) AMPD1 (ENSCLAG00000006645) DENND2C (ENSCLAG00000006608) BCAS2 (ENSCLAG00000004979) TRIM33 (ENSCLAG00000017369) SYT6 (ENSCLAG00000011901)