Boreoeutheria	ANCESTRAL SPECIES	8	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT01000000219986	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Euarchontoglires	ANCESTRAL SPECIES	9	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT01000000219986	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Primates	ANCESTRAL SPECIES	10	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Haplorrhini	ANCESTRAL SPECIES	23	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Simiiformes	ANCESTRAL SPECIES	10	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	5	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306.n #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.e #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234.b #21	ENSGT00390000015224.c.a.a.a.i #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT00390000009693.p.b	ENSGT00940000156247.e #35	ENSGT00940000159709 #37
Cebidae	ANCESTRAL SPECIES	4	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306.n #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979.q.b ##12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.e #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234.b #21	ENSGT00390000015224.c.a.a.a.i #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT00390000009693.p.b	ENSGT00940000156247.e #35	ENSGT00940000159709 #37
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	15	LIMCH1 (ENSCJAG00000019269) #7	ENSCJAG00000086935 #8	ENSCJAG00000019346 #9	APBB2 (ENSCJAG00000019363) #10	NSUN7 (ENSCJAG00000019381) #11	RBM47 (ENSCJAG00000019385) #12	CHRNA9 (ENSCJAG00000019397) #13	RHOH (ENSCJAG00000019407) #14	N4BP2 (ENSCJAG00000019411) #15	ENSCJAG00000044209 #16	PDS5A (ENSCJAG00000019428) #17	UBE2K (ENSCJAG00000041652) #18	SMIM14 (ENSCJAG00000077743) #19	ENSCJAG00000044411 #20	LIAS (ENSCJAG00000000710) #21	RPL9 (ENSCJAG00000000723) #22	KLB (ENSCJAG00000000729) #23	RFC1 (ENSCJAG00000020703) #24	ENSCJAG00000039784 #25	WDR19 (ENSCJAG00000000737) #26	KLHL5 (ENSCJAG00000000789) #27	TMEM156 (ENSCJAG00000000810) #28	FAM114A1 (ENSCJAG00000000820) #29	TLR6 (ENSCJAG00000047967) #30	TLR1 (ENSCJAG00000000831) #31	TLR10 (ENSCJAG00000000842) #32	KLF3 (ENSCJAG00000038931) #33	TBC1D1 (ENSCJAG00000020921) #34	PGM2 (ENSCJAG00000020941) #35	ENSCJAG00000077848 #36	RELL1 (ENSCJAG00000020965) #37
Marmoset	MODERN SPECIES		ENSCJAG00000072380	ENSCJAG00000069972	MYH9 (ENSCJAG00000013642)	ENSCJAG00000079777	ENSCJAG00000019456	APOL6 (ENSCJAG00000080326)	ENSCJAG00000071958	MB (ENSCJAG00000000506)	RASD2 (ENSCJAG00000000509)	MCM5 (ENSCJAG00000000511)	HMOX1 (ENSCJAG00000000516)	ENSCJAG00000074738	TOM1 (ENSCJAG00000000519)	HMGXB4 (ENSCJAG00000000537)	ISX (ENSCJAG00000071825)	ENSCJAG00000022754 ##22	LARGE1 (ENSCJAG00000000968)	ENSCJAG00000078413	SLC5A4 (ENSCJAG00000044264)	RTCB (ENSCJAG00000006128)	BPIFC (ENSCJAG00000006209)	FBXO7 (ENSCJAG00000006238)	TIMP3 (ENSCJAG00000044183)	SYN3 (ENSCJAG00000006266)	MLC1 (ENSCJAG00000003866)	ENSCJAG00000004900	SLC5A1 (ENSCJAG00000011369)	YWHAH (ENSCJAG00000055488)	DEPDC5 (ENSCJAG00000011169)	PRR14L (ENSCJAG00000011163)	PISD (ENSCJAG00000011154)
Cebidae_a	ANCESTRAL SPECIES	34													ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234.b #21	ENSGT00390000015224.c.a.a.a.i #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00940000157949 #34	ENSGT00390000009693.p.b	ENSGT00940000156247.e #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b	ENSGT00940000153404.b
Bolivian squirrel monkey	MODERN SPECIES	65													SMIM14 (ENSSBOG00000027741) #19	UGDH (ENSSBOG00000025568) #20	LIAS (ENSSBOG00000024046) #21	ENSSBOG00000033493 #22	KLB (ENSSBOG00000024517) #23	RFC1 (ENSSBOG00000015554) #24	WDR19 (ENSSBOG00000032016) #26	KLHL5 (ENSSBOG00000025830) #27	TMEM156 (ENSSBOG00000019408) #28	FAM114A1 (ENSSBOG00000025532) #29	KLF3 (ENSSBOG00000005401) #33	ENSSBOG00000033413	TBC1D1 (ENSSBOG00000035438) #34	PGM2 (ENSSBOG00000025985) #35	RELL1 (ENSSBOG00000022983) #37	C4orf19 (ENSSBOG00000034925)	NWD2 (ENSSBOG00000028289)	DTHD1 (ENSSBOG00000034010)	ARAP2 (ENSSBOG00000023662)
Capuchin	MODERN SPECIES	340															AMOTL2 (ENSCCAG00000032766)	ENSCCAG00000014967 #22	RYK (ENSCCAG00000026668)	SLCO2A1 (ENSCCAG00000025064)	ENSCCAG00000026218	RAB6B (ENSCCAG00000035269)	SRPRB (ENSCCAG00000033027)	TF (ENSCCAG00000005245)	TOPBP1 (ENSCCAG00000033242)	ENSCCAG00000033097	BFSP2 (ENSCCAG00000036824)	TMEM108 (ENSCCAG00000035858)	NPHP3 (ENSCCAG00000021931)	UBA5 (ENSCCAG00000013994)	ACAD11 (ENSCCAG00000021357)	DNAJC13 (ENSCCAG00000022295)	ACP3 (ENSCCAG00000030894)
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	845	APBB2 (ENSANAG00000030667) #10	ENSANAG00000038288	NSUN7 (ENSANAG00000020755) #11	RBM47 (ENSANAG00000029440) #12	CHRNA9 (ENSANAG00000033675) #13	RHOH (ENSANAG00000018154) #14	ENSANAG00000017626	ENSANAG00000028738 #15	PDS5A (ENSANAG00000029594) #17	UBE2K (ENSANAG00000020789) #18	ENSANAG00000037699	SMIM14 (ENSANAG00000037317) #19	ENSANAG00000027822	UGDH (ENSANAG00000009489) #20	LIAS (ENSANAG00000032453) #21	ENSANAG00000027218 #22	ENSANAG00000024442	KLB (ENSANAG00000023620) #23	RFC1 (ENSANAG00000026467) #24	WDR19 (ENSANAG00000027127) #26	KLHL5 (ENSANAG00000024143) #27	TMEM156 (ENSANAG00000024309) #28	FAM114A1 (ENSANAG00000020424) #29	TLR6 (ENSANAG00000031860) #30	KLF3 (ENSANAG00000009263) #33	ENSANAG00000027982	ENSANAG00000021832	TBC1D1 (ENSANAG00000025477) #34	ENSANAG00000034818 #35	RELL1 (ENSANAG00000034604) #37	C4orf19 (ENSANAG00000031125)
Mas night monkey	MODERN SPECIES	958	PYCR2 (ENSANAG00000027686)	ENSANAG00000030058	SDE2 (ENSANAG00000028299)	ENSANAG00000022092 ##36	ENSANAG00000017653	ACBD3 (ENSANAG00000034586)	MIXL1 (ENSANAG00000029392)	LIN9 (ENSANAG00000004587)	PARP1 (ENSANAG00000032699)	STUM (ENSANAG00000027408)	ITPKB (ENSANAG00000024650)	PSEN2 (ENSANAG00000028143)	ENSANAG00000020132	COQ8A (ENSANAG00000027573)	CDC42BPA (ENSANAG00000030280)	ENSANAG00000028192 #22	RHOU (ENSANAG00000023279)	ENSANAG00000020122	RAB4A (ENSANAG00000032124)	CCSAP (ENSANAG00000002364)	ACTA1 (ENSANAG00000033052)	NUP133 (ENSANAG00000031425)	ABCB10 (ENSANAG00000028541)	TAF5L (ENSANAG00000030674)	URB2 (ENSANAG00000033963)	GALNT2 (ENSANAG00000023609)	PGBD5 (ENSANAG00000037429)	ENSANAG00000024312	ENSANAG00000028566	COG2 (ENSANAG00000023360)	AGT (ENSANAG00000021401)
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.a ##22
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.a ##22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.a ##22
Bolivian squirrel monkey	MODERN SPECIES	216	GDPD2 (ENSSBOG00000025477)	ENSSBOG00000025898	ENSSBOG00000030916	RAB41 (ENSSBOG00000020927)	ARR3 (ENSSBOG00000024637)	AWAT1 (ENSSBOG00000022988)	DGAT2L6 (ENSSBOG00000025537)	ENSSBOG00000023660	AWAT2 (ENSSBOG00000023258)	EDA (ENSSBOG00000009144)	NALF2 (ENSSBOG00000026957)	ENSSBOG00000027583	EFNB1 (ENSSBOG00000020665)	STARD8 (ENSSBOG00000031042)	YIPF6 (ENSSBOG00000021313)	ENSSBOG00000014590 ##22
Capuchin	MODERN SPECIES	13	CCN4 (ENSCCAG00000025934)	TG (ENSCCAG00000028833)	SLA (ENSCCAG00000031926)	PHF20L1 (ENSCCAG00000020490)	TMEM71 (ENSCCAG00000028721)	DNAAF11 (ENSCCAG00000031017)	KCNQ3 (ENSCCAG00000028183)	HHLA1 (ENSCCAG00000036215)	OC90 (ENSCCAG00000031064)	EFR3A (ENSCCAG00000019655)	ADCY8 (ENSCCAG00000029810)	ASAP1 (ENSCCAG00000022593)	CYRIB (ENSCCAG00000032744)	GSDMC (ENSCCAG00000021127)	MYC (ENSCCAG00000032999)	ENSCCAG00000018472 ##22	ENSCCAG00000031130	ENSCCAG00000037347	LRATD2 (ENSCCAG00000020357)	ENSCCAG00000037687	MSR1 (ENSCCAG00000034933)	GPHN (ENSCCAG00000020521)	ENSCCAG00000022214	FAM71D (ENSCCAG00000026161)	PALS1 (ENSCCAG00000031683)	ATP6V1D (ENSCCAG00000037989)	EIF2S1 (ENSCCAG00000028622)	PLEK2 (ENSCCAG00000029270)	TMEM229B (ENSCCAG00000016856)	PLEKHH1 (ENSCCAG00000031526)	PIGH (ENSCCAG00000035097)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.b ##22
Mas night monkey	MODERN SPECIES	886					RTP3 (ENSANAG00000026632)	LTF (ENSANAG00000034650)	CCRL2 (ENSANAG00000030968)	CCR2 (ENSANAG00000032091)	CCR3 (ENSANAG00000029115)	ENSANAG00000028667	FYCO1 (ENSANAG00000032948)	CCR9 (ENSANAG00000020077)	LZTFL1 (ENSANAG00000000596)	SLC6A20 (ENSANAG00000034624)	SACM1L (ENSANAG00000035029)	ENSANAG00000023940 ##22	LIMD1 (ENSANAG00000019956)	LARS2 (ENSANAG00000034662)	TMEM158 (ENSANAG00000024964)	CDCP1 (ENSANAG00000034819)	CLEC3B (ENSANAG00000027596)	EXOSC7 (ENSANAG00000028607)	ZDHHC3 (ENSANAG00000021495)	TMEM42 (ENSANAG00000034383)	ENSANAG00000036102	KIF15 (ENSANAG00000037629)	ENSANAG00000028996	ZNF501 (ENSANAG00000018943)	ZNF502 (ENSANAG00000021135)	ENSANAG00000034886	ZNF35 (ENSANAG00000019550)
Cebidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.b ##22
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.h.b ##22
Bolivian squirrel monkey	MODERN SPECIES	93	NFATC2 (ENSSBOG00000023445)	KCNG1 (ENSSBOG00000030989)	MOCS3 (ENSSBOG00000016142)	DPM1 (ENSSBOG00000035012)	ADNP (ENSSBOG00000031931)	BCAS4 (ENSSBOG00000031019)	PARD6B (ENSSBOG00000033004)	RIPOR3 (ENSSBOG00000020304)	ENSSBOG00000021238	PEDS1 (ENSSBOG00000000313)	ENSSBOG00000028538	SNAI1 (ENSSBOG00000034760)	RNF114 (ENSSBOG00000027055)	SPATA2 (ENSSBOG00000027105)	SLC9A8 (ENSSBOG00000008701)	ENSSBOG00000030451 ##22	B4GALT5 (ENSSBOG00000012698)	PTGIS (ENSSBOG00000032693)	KCNB1 (ENSSBOG00000030068)	ZNFX1 (ENSSBOG00000024677)	DDX27 (ENSSBOG00000034281)	ENSSBOG00000001880	STAU1 (ENSSBOG00000034448)	CSE1L (ENSSBOG00000021396)	ARFGEF2 (ENSSBOG00000027163)	PREX1 (ENSSBOG00000022286)	SULF2 (ENSSBOG00000019541)	NCOA3 (ENSSBOG00000032467)
Catarrhini	DUPLICATION
Catarrhini	DUPLICATION
Catarrhini	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Pan	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.a #22
Chimpanzee	MODERN SPECIES	17	NSUN7 (ENSPTRG00000016007) #11	RBM47 (ENSPTRG00000016006) #12	CHRNA9 (ENSPTRG00000016003) #13	ENSPTRG00000051473	RHOH (ENSPTRG00000050417) #14	N4BP2 (ENSPTRG00000016001) #15	ENSPTRG00000047265	ENSPTRG00000052828	PDS5A (ENSPTRG00000015999) #17	ENSPTRG00000046479	UBE2K (ENSPTRG00000050230) #18	SMIM14 (ENSPTRG00000048386) #19	UGDH (ENSPTRG00000015996) #20	ENSPTRG00000048813	LIAS (ENSPTRG00000015994) #21	ENSPTRG00000050404 #22	ENSPTRG00000043669	KLB (ENSPTRG00000015992) #23	RFC1 (ENSPTRG00000015991) #24	WDR19 (ENSPTRG00000015990) #26	KLHL5 (ENSPTRG00000015989) #27	TMEM156 (ENSPTRG00000015988) #28	FAM114A1 (ENSPTRG00000023549) #29	TLR10 (ENSPTRG00000015984) #32	KLF3 (ENSPTRG00000015983) #33	ENSPTRG00000044539	PTTG2 (ENSPTRG00000043626)	TBC1D1 (ENSPTRG00000015981) #34	ENSPTRG00000051394	PGM2 (ENSPTRG00000015979) #35	ENSPTRG00000045616
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00390000015224.c.a.a.a.j.b #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00390000009693.m.b	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Hominoidea	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Hominidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Homo/Pan/Gorilla group	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Homo/Pan group	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Pan	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Chimpanzee	DUPLICATION
Chimpanzee	MODERN SPECIES	972	GPR119 (ENSPTRG00000023895)	RBMX2 (ENSPTRG00000022269)	ENOX2 (ENSPTRG00000022270)	ARHGAP36 (ENSPTRG00000022271)	IGSF1 (ENSPTRG00000022273)	OR13H1 (ENSPTRG00000022275)	ENSPTRG00000039845	STK26 (ENSPTRG00000022277)	FRMD7 (ENSPTRG00000022278)	ENSPTRG00000045097	ENSPTRG00000045178	MBNL3 (ENSPTRG00000022280)	HS6ST2 (ENSPTRG00000022281)	USP26 (ENSPTRG00000028202)	TFDP3 (ENSPTRG00000028201)	ENSPTRG00000049459 #22	GPC4 (ENSPTRG00000022282)	GPC3 (ENSPTRG00000022283)	ENSPTRG00000049683	ENSPTRG00000043618	ENSPTRG00000043437	CCDC160 (ENSPTRG00000028200)	PHF6 (ENSPTRG00000022286)	HPRT1 (ENSPTRG00000022287)	PLAC1 (ENSPTRG00000022289)	PABIR2 (ENSPTRG00000022290)	PABIR3 (ENSPTRG00000022292)	MOSPD1 (ENSPTRG00000022293)	ENSPTRG00000051856	ENSPTRG00000051890	ENSPTRG00000039452
Chimpanzee	MODERN SPECIES	10	RHPN2 (ENSPTRG00000010801)	FAAP24 (ENSPTRG00000010798)	CEP89 (ENSPTRG00000010797)	SLC7A9 (ENSPTRG00000010796)	TDRD12 (ENSPTRG00000010795)	NUDT19 (ENSPTRG00000034496)	RGS9BP (ENSPTRG00000047454)	ANKRD27 (ENSPTRG00000010792)	PDCD5 (ENSPTRG00000010791)	DPY19L3 (ENSPTRG00000010790)	ZNF507 (ENSPTRG00000010789)	ENSPTRG00000048388	TSHZ3 (ENSPTRG00000010788)	ZNF536 (ENSPTRG00000010786)	ENSPTRG00000052821	ENSPTRG00000050716 #22	URI1 (ENSPTRG00000010784)	CCNE1 (ENSPTRG00000010782)	C19H19orf12 (ENSPTRG00000010781)	PLEKHF1 (ENSPTRG00000010780)	POP4 (ENSPTRG00000010779)	VSTM2B (ENSPTRG00000010778)	UQCRFS1 (ENSPTRG00000010777)	ENSPTRG00000049554	ZNF254 (ENSPTRG00000019222)	ENSPTRG00000046645	ZNF681 (ENSPTRG00000043365)	ENSPTRG00000048149	ZNF675 (ENSPTRG00000022567)	ENSPTRG00000043755	ENSPTRG00000043231
Orangutan	MODERN SPECIES	1	ADIRF (ENSPPYG00000038600)	ENSPPYG00000002268	MMRN2 (ENSPPYG00000002269)	BMPR1A (ENSPPYG00000002270)	LDB3 (ENSPPYG00000002271)	OPN4 (ENSPPYG00000002272)	WAPL (ENSPPYG00000029542)	GRID1 (ENSPPYG00000002273)	CCSER2 (ENSPPYG00000002274)	RGR (ENSPPYG00000002275)	LRIT1 (ENSPPYG00000002276)	LRIT2 (ENSPPYG00000002277)	CDHR1 (ENSPPYG00000002278)	GPR15LG (ENSPPYG00000002279)	GHITM (ENSPPYG00000002280)	ENSPPYG00000002282 #22	NRG3 (ENSPPYG00000032077)	SH2D4B (ENSPPYG00000002286)	TSPAN14 (ENSPPYG00000002287)	DYDC2 (ENSPPYG00000002288)	DYDC1 (ENSPPYG00000002289)	ENSPPYG00000002290	MAT1A (ENSPPYG00000002291)	ANXA11 (ENSPPYG00000002292)	PLAC9 (ENSPPYG00000038414)	TMEM254 (ENSPPYG00000002293) #25	ENSPPYG00000002294	ENSPPYG00000002295	ENSPPYG00000041507	ENSPPYG00000039923	ZCCHC24 (ENSPPYG00000035309)
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00390000015224.c.a.a.a.j.b #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00940000156247 #35
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.j.b #22
Black snub-nosed monkey	MODERN SPECIES	734												ENSRBIG00000038024	ENSRBIG00000028690 #19	UGDH (ENSRBIG00000016389) #20	LIAS (ENSRBIG00000032991) #21	RPL9 (ENSRBIG00000035343) #22	KLB (ENSRBIG00000019849) #23	ENSRBIG00000024474	RFC1 (ENSRBIG00000040471) #24	WDR19 (ENSRBIG00000033535) #26	KLHL5 (ENSRBIG00000033079) #27	TMEM156 (ENSRBIG00000038386) #28	FAM114A1 (ENSRBIG00000033199) #29	TLR1 (ENSRBIG00000035072) #31	TLR10 (ENSRBIG00000029426) #32	KLF3 (ENSRBIG00000030404) #33	ENSRBIG00000043144	PTTG2 (ENSRBIG00000035891)	TBC1D1 (ENSRBIG00000024657) #34	PGM2 (ENSRBIG00000043425) #35	RELL1 (ENSRBIG00000038230) #37
Catarrhini	ANCESTRAL SPECIES	14	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00390000015224.c.a.a.a.j.b #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00390000009693.m.b
Hominoidea	ANCESTRAL SPECIES	10	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00940000162418.h	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.k.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00770000121815	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Gibbon	MODERN SPECIES	12	UCHL1 (ENSNLEG00000034128) #9	APBB2 (ENSNLEG00000017166) #10	NSUN7 (ENSNLEG00000017157) #11	RBM47 (ENSNLEG00000017151) #12	CHRNA9 (ENSNLEG00000017150) #13	ENSNLEG00000030066	N4BP2 (ENSNLEG00000017133) #15	ENSNLEG00000029656	PDS5A (ENSNLEG00000017121) #17	UBE2K (ENSNLEG00000017116) #18	ENSNLEG00000032179	ENSNLEG00000029176	SMIM14 (ENSNLEG00000031355) #19	UGDH (ENSNLEG00000017110) #20	LIAS (ENSNLEG00000036301) #21	RPL9 (ENSNLEG00000017100) #22	ENSNLEG00000032273	KLB (ENSNLEG00000017099) #23	RFC1 (ENSNLEG00000017090) #24	WDR19 (ENSNLEG00000017076) #26	KLHL5 (ENSNLEG00000017071) #27	TMEM156 (ENSNLEG00000030669) #28	FAM114A1 (ENSNLEG00000017062) #29	ENSNLEG00000031854 #30	TLR1 (ENSNLEG00000017057) #31	TLR10 (ENSNLEG00000017048) #32	KLF3 (ENSNLEG00000017046) #33	TBC1D1 (ENSNLEG00000017022) #34	ENSNLEG00000035345	PGM2 (ENSNLEG00000017010) #35	RELL1 (ENSNLEG00000017005) #37
Hominidae	ANCESTRAL SPECIES	12	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00940000162418.h	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.k.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00770000121815	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Orangutan	MODERN SPECIES	17	APBB2 (ENSPPYG00000014690) #10	NSUN7 (ENSPPYG00000014689) #11	ENSPPYG00000036617	RBM47 (ENSPPYG00000040899) #12	CHRNA9 (ENSPPYG00000015291) #13	ENSPPYG00000030777	RHOH (ENSPPYG00000014687) #14	N4BP2 (ENSPPYG00000014686) #15	ENSPPYG00000014684	PDS5A (ENSPPYG00000014682) #17	ENSPPYG00000040313	UBE2K (ENSPPYG00000030577) #18	SMIM14 (ENSPPYG00000014678) #19	UGDH (ENSPPYG00000014677) #20	LIAS (ENSPPYG00000014676) #21	ENSPPYG00000014675 #22	KLB (ENSPPYG00000014674) #23	RFC1 (ENSPPYG00000014673) #24	WDR19 (ENSPPYG00000014672) #26	KLHL5 (ENSPPYG00000015288) #27	TMEM156 (ENSPPYG00000014671) #28	FAM114A1 (ENSPPYG00000014670) #29	TLR6 (ENSPPYG00000014669) #30	TLR1 (ENSPPYG00000014668) #31	TLR10 (ENSPPYG00000014667) #32	KLF3 (ENSPPYG00000014666) #33	TBC1D1 (ENSPPYG00000014663) #34	PGM2 (ENSPPYG00000014661) #35	RELL1 (ENSPPYG00000031559) #37	C4orf19 (ENSPPYG00000038950)	NWD2 (ENSPPYG00000030808)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	11	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00940000162418.h	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.k.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00950000183098.b.a.b.ib.a	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00770000121815
Homo/Pan group	ANCESTRAL SPECIES	10	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.k.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00950000183098.b.a.b.ib.a	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00770000121815	ENSGT00940000156247 #35
Human	MODERN SPECIES	16	PHOX2B (ENSG00000109132)	LIMCH1 (ENSG00000064042) #7	UCHL1 (ENSG00000154277) #9	ENSG00000289761	APBB2 (ENSG00000163697) #10	NSUN7 (ENSG00000179299) #11	RBM47 (ENSG00000163694) #12	CHRNA9 (ENSG00000174343) #13	RHOH (ENSG00000168421) #14	N4BP2 (ENSG00000078177) #15	PDS5A (ENSG00000121892) #17	UBE2K (ENSG00000078140) #18	SMIM14 (ENSG00000163683) #19	UGDH (ENSG00000109814) #20	LIAS (ENSG00000121897) #21	RPL9 (ENSG00000163682) #22	KLB (ENSG00000134962) #23	RFC1 (ENSG00000035928) #24	WDR19 (ENSG00000157796) #26	KLHL5 (ENSG00000109790) #27	TMEM156 (ENSG00000121895) #28	FAM114A1 (ENSG00000197712) #29	TLR6 (ENSG00000174130) #30	TLR1 (ENSG00000174125) #31	TLR10 (ENSG00000174123) #32	KLF3 (ENSG00000109787) #33	PTTG2 (ENSG00000250254)	TBC1D1 (ENSG00000065882) #34	PGM2 (ENSG00000169299) #35	RELL1 (ENSG00000181826) #37	C4orf19 (ENSG00000154274)
Pan	ANCESTRAL SPECIES	7	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00390000003710.c.a.b.a.b	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.k.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00950000183098.b.a.b.ib.a	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00770000121815	ENSGT00940000156247 #35	ENSGT00950000182922.a.a.a.a.v.a.b
Chimpanzee	MODERN SPECIES	6	ENSPTRG00000048990	MAP2K5 (ENSPTRG00000007207)	C15H15orf61 (ENSPTRG00000030250)	IQCH (ENSPTRG00000007205)	AAGAB (ENSPTRG00000007202)	SMAD3 (ENSPTRG00000007199)	ENSPTRG00000047146	ENSPTRG00000044014	SMAD6 (ENSPTRG00000007198)	LCTL (ENSPTRG00000007197)	ZWILCH (ENSPTRG00000007196)	RPL4 (ENSPTRG00000007195)	SNAPC5 (ENSPTRG00000007194)	ENSPTRG00000049603	MAP2K1 (ENSPTRG00000007193)	ENSPTRG00000051889 #22	TIPIN (ENSPTRG00000007192)	DIS3L (ENSPTRG00000007191)	MEGF11 (ENSPTRG00000007189)	RAB11A (ENSPTRG00000044358)	DENND4A (ENSPTRG00000007186)	SLC24A1 (ENSPTRG00000007185)	INTS14 (ENSPTRG00000007184)	HACD3 (ENSPTRG00000007183)	DPP8 (ENSPTRG00000007182)	IGDCC4 (ENSPTRG00000007180)	IGDCC3 (ENSPTRG00000007179)	PARP16 (ENSPTRG00000007178)	CILP (ENSPTRG00000007177)	CLPX (ENSPTRG00000007176)	PDCD7 (ENSPTRG00000045629)
Bonobo	DUPLICATION
Bonobo	MODERN SPECIES	17	APBB2 (ENSPPAG00000037504) #10	NSUN7 (ENSPPAG00000023705) #11	RBM47 (ENSPPAG00000029763) #12	CHRNA9 (ENSPPAG00000027901) #13	ENSPPAG00000040465	RHOH (ENSPPAG00000005820) #14	N4BP2 (ENSPPAG00000033203) #15	ENSPPAG00000034202	PDS5A (ENSPPAG00000036222) #17	ENSPPAG00000000498	UBE2K (ENSPPAG00000033169) #18	SMIM14 (ENSPPAG00000043029) #19	UGDH (ENSPPAG00000020308) #20	ENSPPAG00000027490	LIAS (ENSPPAG00000040519) #21	RPL9 (ENSPPAG00000042633) #22	KLB (ENSPPAG00000015322) #23	RFC1 (ENSPPAG00000042006) #24	WDR19 (ENSPPAG00000042936) #26	KLHL5 (ENSPPAG00000038654) #27	TMEM156 (ENSPPAG00000034491) #28	FAM114A1 (ENSPPAG00000040157) #29	TLR1 (ENSPPAG00000018402) #31	TLR10 (ENSPPAG00000013870) #32	KLF3 (ENSPPAG00000023728) #33	ENSPPAG00000042246	PTTG2 (ENSPPAG00000026206)	TBC1D1 (ENSPPAG00000037604) #34	ENSPPAG00000025879	PGM2 (ENSPPAG00000041476) #35	ENSPPAG00000010345
Bonobo	MODERN SPECIES	6	MAP2K5 (ENSPPAG00000036945)	C15orf61 (ENSPPAG00000026999)	IQCH (ENSPPAG00000042974)	AAGAB (ENSPPAG00000041055)	SMAD3 (ENSPPAG00000033769)	ENSPPAG00000020485	ENSPPAG00000036915	SMAD6 (ENSPPAG00000027722)	LCTL (ENSPPAG00000040836)	ZWILCH (ENSPPAG00000033861)	ENSPPAG00000035309	SNAPC5 (ENSPPAG00000041196)	ENSPPAG00000033063	MAP2K1 (ENSPPAG00000028577)	ENSPPAG00000038145	ENSPPAG00000041842 #22	TIPIN (ENSPPAG00000033427)	DIS3L (ENSPPAG00000019888)	MEGF11 (ENSPPAG00000043580)	RAB11A (ENSPPAG00000030195)	DENND4A (ENSPPAG00000022752)	SLC24A1 (ENSPPAG00000042941)	INTS14 (ENSPPAG00000030391)	HACD3 (ENSPPAG00000014660)	DPP8 (ENSPPAG00000032419)	IGDCC4 (ENSPPAG00000036548)	IGDCC3 (ENSPPAG00000042057)	PARP16 (ENSPPAG00000030232)	CILP (ENSPPAG00000042751)	CLPX (ENSPPAG00000040563)	ENSPPAG00000035027
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	17	APBB2 (ENSGGOG00000007435) #10	NSUN7 (ENSGGOG00000034897) #11	RBM47 (ENSGGOG00000001367) #12	CHRNA9 (ENSGGOG00000016532) #13	ENSGGOG00000042778	N4BP2 (ENSGGOG00000005103) #15	ENSGGOG00000005583	PDS5A (ENSGGOG00000007334) #17	ENSGGOG00000036366	ENSGGOG00000025985	UBE2K (ENSGGOG00000003261) #18	SMIM14 (ENSGGOG00000038154) #19	UGDH (ENSGGOG00000025911) #20	ENSGGOG00000040886	LIAS (ENSGGOG00000014977) #21	RPL9 (ENSGGOG00000022799) #22	ENSGGOG00000037633	KLB (ENSGGOG00000013647) #23	RFC1 (ENSGGOG00000007977) #24	WDR19 (ENSGGOG00000005922) #26	KLHL5 (ENSGGOG00000001643) #27	TMEM156 (ENSGGOG00000004085) #28	FAM114A1 (ENSGGOG00000012372) #29	TLR10 (ENSGGOG00000025418) #32	KLF3 (ENSGGOG00000004667) #33	ENSGGOG00000039341	PTTG2 (ENSGGOG00000037103)	ENSGGOG00000007187 #34	ENSGGOG00000024170	PGM2 (ENSGGOG00000013725) #35	RELL1 (ENSGGOG00000014944) #37
Gorilla	MODERN SPECIES	6	ENSGGOG00000027762	ENSGGOG00000042211	MAP2K5 (ENSGGOG00000004734)	C15orf61 (ENSGGOG00000004732)	IQCH (ENSGGOG00000004722)	ENSGGOG00000004714	ENSGGOG00000012045	ENSGGOG00000038329	SMAD6 (ENSGGOG00000013002)	LCTL (ENSGGOG00000006350)	ZWILCH (ENSGGOG00000003703)	ENSGGOG00000003695	SNAPC5 (ENSGGOG00000003693)	ENSGGOG00000042752	MAP2K1 (ENSGGOG00000003687)	ENSGGOG00000024529 #22	TIPIN (ENSGGOG00000000061)	DIS3L (ENSGGOG00000001549)	MEGF11 (ENSGGOG00000000293)	RAB11A (ENSGGOG00000014252)	ENSGGOG00000022841	DENND4A (ENSGGOG00000014870)	SLC24A1 (ENSGGOG00000016389)	INTS14 (ENSGGOG00000003838)	HACD3 (ENSGGOG00000022837)	DPP8 (ENSGGOG00000012470)	IGDCC4 (ENSGGOG00000010463)	IGDCC3 (ENSGGOG00000010452)	PARP16 (ENSGGOG00000022851)	CILP (ENSGGOG00000042968)	CLPX (ENSGGOG00000000326)
Cercopithecidae	ANCESTRAL SPECIES	10	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00390000015224.c.a.a.a.j.b #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b
Rhinopithecus	ANCESTRAL SPECIES	119	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000161602	ENSGT00940000155229	ENSGT00940000155155.c #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000001374.e.a	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00940000157489 #23	ENSGT00730000111066.q #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Golden snub-nosed monkey	MODERN SPECIES	735	ENSRROG00000007474	ENSRROG00000033501	RBM47 (ENSRROG00000044696) #12	CHRNA9 (ENSRROG00000031657) #13	ENSRROG00000031091	RHOH (ENSRROG00000021123) #14	N4BP2 (ENSRROG00000040871) #15	ENSRROG00000043145	ENSRROG00000037093 #17	ENSRROG00000043874	UBE2K (ENSRROG00000030975) #18	ENSRROG00000041757	SMIM14 (ENSRROG00000036772) #19	UGDH (ENSRROG00000001501) #20	LIAS (ENSRROG00000042971) #21	RPL9 (ENSRROG00000014078) #22	KLB (ENSRROG00000043728) #23	ENSRROG00000040664	ENSRROG00000011680 #24
Cercopithecinae	ANCESTRAL SPECIES	14	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	DUPLICATION
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.a #22
Macaca	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.a #22
Pig-tailed macaque	MODERN SPECIES	193																ENSMNEG00000007339 #22	ENSMNEG00000033956	ENSMNEG00000036514	ACVR2A (ENSMNEG00000043553)	ORC4 (ENSMNEG00000031287)	MBD5 (ENSMNEG00000029374)	EPC2 (ENSMNEG00000039186)	KIF5C (ENSMNEG00000022981)	LYPD6B (ENSMNEG00000036224)	LYPD6 (ENSMNEG00000014126)	MMADHC (ENSMNEG00000036865)	ENSMNEG00000033300	RND3 (ENSMNEG00000034976)	RBM43 (ENSMNEG00000030900)	ENSMNEG00000043989	NMI (ENSMNEG00000036210)
Macaca_a	ANCESTRAL SPECIES	17	ENSGT01030000234618.F	ENSGT01050000244848.C.a	ENSGT01100000263493.a.b.a.a.a.a.a.a.a.a.a.a.a.a.b	ENSGT00940000159262	ENSGT00390000008859.b.d.k.b.f	ENSGT00390000002862.i.b	ENSGT00390000002862.i.a	ENSGT00940000155953	ENSGT00950000182883.b.a.a	ENSGT00390000015060.m.d	ENSGT00940000157521.b	ENSGT00390000008033	ENSGT00950000182860.a.b.b	ENSGT00390000006631	ENSGT00950000183208.A.c.a.e	ENSGT00390000015224.c.a.a.a.k.e.a #22	ENSGT00940000157233	ENSGT00390000016542	ENSGT00530000064137.a.b	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.b.a.a.a	ENSGT00940000158526	ENSGT00390000010822.p	ENSGT00940000158539	ENSGT00390000000220.A	ENSGT00390000000220.B	ENSGT00390000015050	ENSGT00940000157541	ENSGT00530000063686.a.b	ENSGT00530000063686.a.a	ENSGT00940000157201	ENSGT00390000012204
Crab-eating macaque	MODERN SPECIES	3	ENSMFAG00000042200	ENSMFAG00000058697	THSD7B (ENSMFAG00000031342)	ENSMFAG00000049120	ENSMFAG00000035962	ENSMFAG00000040453	SPOPL (ENSMFAG00000033909)	NXPH2 (ENSMFAG00000039309)	LRP1B (ENSMFAG00000036929)	ENSMFAG00000064685	ENSMFAG00000049588	KYNU (ENSMFAG00000041160)	ARHGAP15 (ENSMFAG00000016740)	GTDC1 (ENSMFAG00000032520)	ZEB2 (ENSMFAG00000030381)	ENSMFAG00000052786 #22	ENSMFAG00000019961	ACVR2A (ENSMFAG00000003464)	ORC4 (ENSMFAG00000031595)	MBD5 (ENSMFAG00000035493)	ENSMFAG00000058250	EPC2 (ENSMFAG00000002751)	ENSMFAG00000052887	KIF5C (ENSMFAG00000038774)	LYPD6B (ENSMFAG00000046204)	LYPD6 (ENSMFAG00000002977)	MMADHC (ENSMFAG00000001801)	ENSMFAG00000060272	ENSMFAG00000037633	RND3 (ENSMFAG00000045221)	RBM43 (ENSMFAG00000031648)
Rhesus	MODERN SPECIES	3	CXCR4 (ENSMMUG00000011918)	ENSMMUG00000061465	THSD7B (ENSMMUG00000017081)	ENSMMUG00000042063	HNMT (ENSMMUG00000006918)	SPOPL (ENSMMUG00000002560)	NXPH2 (ENSMMUG00000005176)	ENSMMUG00000013925	LRP1B (ENSMMUG00000009885)	KYNU (ENSMMUG00000021330)	ARHGAP15 (ENSMMUG00000006528)	GTDC1 (ENSMMUG00000011922)	ZEB2 (ENSMMUG00000016845)	ENSMMUG00000065347	ENSMMUG00000052142	ENSMMUG00000055627 #22	ENSMMUG00000006925	ACVR2A (ENSMMUG00000000042)	ORC4 (ENSMMUG00000000043)	MBD5 (ENSMMUG00000014921)	ENSMMUG00000049941	ENSMMUG00000054591	EPC2 (ENSMMUG00000023176)	ENSMMUG00000031468	KIF5C (ENSMMUG00000009268)	LYPD6B (ENSMMUG00000009475)	ENSMMUG00000056996	LYPD6 (ENSMMUG00000038492)	MMADHC (ENSMMUG00000005633)	ENSMMUG00000051118	ENSMMUG00000058846
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.a #22
Olive baboon	MODERN SPECIES	1	NXPH2 (ENSPANG00000015734)	ENSPANG00000038498	ENSPANG00000018859	LRP1B (ENSPANG00000007101)	ENSPANG00000046031	ENSPANG00000039415	ENSPANG00000050765	KYNU (ENSPANG00000019763)	ARHGAP15 (ENSPANG00000009773)	GTDC1 (ENSPANG00000021875)	ZEB2 (ENSPANG00000008399)	ENSPANG00000040201	ENSPANG00000045723	ENSPANG00000043648	ENSPANG00000003757	ENSPANG00000015679 #22	CLIC1 (ENSPANG00000019928)	ENSPANG00000035057	ACVR2A (ENSPANG00000012445)	ORC4 (ENSPANG00000009846)	MBD5 (ENSPANG00000015848)	EPC2 (ENSPANG00000009534)	ENSPANG00000042526	KIF5C (ENSPANG00000018689)	LYPD6B (ENSPANG00000022096)	LYPD6 (ENSPANG00000019895)	ENSPANG00000048846	ENSPANG00000038761	MMADHC (ENSPANG00000019761)	ENSPANG00000009096	RND3 (ENSPANG00000015939)
Cercopithecinae_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.b #22
Macaca	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.b #22
Macaca_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.k.e.b #22
Crab-eating macaque	MODERN SPECIES	2	MUCL1 (ENSMFAG00000051719)	TESPA1 (ENSMFAG00000040218)	NEUROD4 (ENSMFAG00000030073)	ENSMFAG00000065363	ENSMFAG00000063829	ENSMFAG00000065221	ENSMFAG00000003915	OR10A7 (ENSMFAG00000036855)	OR6C74 (ENSMFAG00000054196)	OR6C1 (ENSMFAG00000054015)	OR6C75 (ENSMFAG00000059604)	ENSMFAG00000055470	OR6C2 (ENSMFAG00000028782)	ENSMFAG00000055540	ENSMFAG00000064214	ENSMFAG00000062892 #22	OR6C4 (ENSMFAG00000052186)	OR2AP1 (ENSMFAG00000056876)	OR10P1 (ENSMFAG00000030027)	METTL7B (ENSMFAG00000041138)	ITGA7 (ENSMFAG00000022956)	BLOC1S1 (ENSMFAG00000057152)	RDH5 (ENSMFAG00000002032)	CD63 (ENSMFAG00000045733)	ENSMFAG00000045270	ENSMFAG00000048555	ORMDL2 (ENSMFAG00000061489)	DNAJC14 (ENSMFAG00000040360)	MMP19 (ENSMFAG00000002663)	PYM1 (ENSMFAG00000003048)	DGKA (ENSMFAG00000042903)
Cercopithecinae_a	ANCESTRAL SPECIES	13	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018052.l.a	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k.f #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34
Cercopithecinae_b	ANCESTRAL SPECIES	6	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018052.l.a	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k.f #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34
Cercopithecinae_d	ANCESTRAL SPECIES	116	ENSGT00940000157352 #11	ENSGT00390000018052.l.a	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT01060000249734	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k.f #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00900000143434	ENSGT00910000147773	ENSGT00390000009693.m.b	ENSGT00940000157949 #34	ENSGT00940000156247 #35
Sooty mangabey	MODERN SPECIES	639	ENSCATG00000033739	RBM47 (ENSCATG00000042064) #12	CHRNA9 (ENSCATG00000044901) #13	ENSCATG00000035615	RHOH (ENSCATG00000020941) #14	N4BP2 (ENSCATG00000039636) #15	ENSCATG00000039908	ENSCATG00000041746	ENSCATG00000034563 #17	ENSCATG00000004076	UBE2K (ENSCATG00000033637) #18	SMIM14 (ENSCATG00000044936) #19	UGDH (ENSCATG00000029946) #20	ENSCATG00000037258	LIAS (ENSCATG00000037444) #21	RPL9 (ENSCATG00000031890) #22	ENSCATG00000009623	KLB (ENSCATG00000025508) #23	RFC1 (ENSCATG00000015035) #24	WDR19 (ENSCATG00000038619) #26	KLHL5 (ENSCATG00000031256) #27	TMEM156 (ENSCATG00000034175) #28	FAM114A1 (ENSCATG00000045008) #29	TLR1 (ENSCATG00000018736) #31	TLR10 (ENSCATG00000020190) #32	KLF3 (ENSCATG00000013375) #33	ENSCATG00000006552	TBC1D1 (ENSCATG00000008268) #34	ENSCATG00000037748	PTTG2 (ENSCATG00000040651)	PGM2 (ENSCATG00000031967) #35
Drill	MODERN SPECIES	873					CHRNA9 (ENSMLEG00000038729) #13	RHOH (ENSMLEG00000025962) #14	N4BP2 (ENSMLEG00000034237) #15	ENSMLEG00000040433	ENSMLEG00000043936 #17	ENSMLEG00000005156	UBE2K (ENSMLEG00000029291) #18	SMIM14 (ENSMLEG00000038901) #19	UGDH (ENSMLEG00000039275) #20	ENSMLEG00000022091	LIAS (ENSMLEG00000036242) #21	RPL9 (ENSMLEG00000036679) #22	ENSMLEG00000027315	KLB (ENSMLEG00000038459) #23	RFC1 (ENSMLEG00000044325) #24	WDR19 (ENSMLEG00000039278) #26	KLHL5 (ENSMLEG00000040275) #27	FAM114A1 (ENSMLEG00000041313) #29	TLR1 (ENSMLEG00000027239) #31	TLR10 (ENSMLEG00000003050) #32	KLF3 (ENSMLEG00000037643) #33	PTTG2 (ENSMLEG00000034588)	TBC1D1 (ENSMLEG00000038640) #34	PGM2 (ENSMLEG00000031723) #35	RELL1 (ENSMLEG00000043264) #37	C4orf19 (ENSMLEG00000033231)	NWD2 (ENSMLEG00000031874)
Olive baboon	MODERN SPECIES	13	NSUN7 (ENSPANG00000001045) #11	ENSPANG00000048835	ENSPANG00000014103	ENSPANG00000040494	RBM47 (ENSPANG00000005980) #12	ENSPANG00000044258	CHRNA9 (ENSPANG00000040189) #13	ENSPANG00000033774	RHOH (ENSPANG00000017744) #14	N4BP2 (ENSPANG00000005533) #15	PDS5A (ENSPANG00000001639) #17	UBE2K (ENSPANG00000014212) #18	SMIM14 (ENSPANG00000006965) #19	UGDH (ENSPANG00000016219) #20	LIAS (ENSPANG00000001640) #21	RPL9 (ENSPANG00000017541) #22	KLB (ENSPANG00000018421) #23	RFC1 (ENSPANG00000016220) #24	WDR19 (ENSPANG00000003767) #26	KLHL5 (ENSPANG00000003768) #27	TMEM156 (ENSPANG00000050889) #28	FAM114A1 (ENSPANG00000016873) #29	TLR6 (ENSPANG00000045913) #30	TLR1 (ENSPANG00000018956) #31	TLR10 (ENSPANG00000034361) #32	KLF3 (ENSPANG00000000584) #33	TBC1D1 (ENSPANG00000015230) #34	ENSPANG00000048792	PGM2 (ENSPANG00000024997) #35	RELL1 (ENSPANG00000018258) #37	C4orf19 (ENSPANG00000018422)
Macaca	ANCESTRAL SPECIES	25	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018052.l.a	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00910000146901	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00940000154143.e.d	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k.f #22	ENSGT00910000146954	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456.a #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Pig-tailed macaque	MODERN SPECIES	141	ENSMNEG00000045350	RBM47 (ENSMNEG00000040774) #12	CHRNA9 (ENSMNEG00000038667) #13	ENSMNEG00000040971	ENSMNEG00000009530 #14	N4BP2 (ENSMNEG00000028631) #15	ENSMNEG00000027574	ENSMNEG00000028327 #17	ENSMNEG00000010026	ENSMNEG00000023929	ENSMNEG00000036755 #18	SMIM14 (ENSMNEG00000031992) #19	UGDH (ENSMNEG00000041384) #20	ENSMNEG00000040854	LIAS (ENSMNEG00000005114) #21	RPL9 (ENSMNEG00000012845) #22	ENSMNEG00000005467	KLB (ENSMNEG00000039728) #23	RFC1 (ENSMNEG00000032597) #24	WDR19 (ENSMNEG00000043290) #26	KLHL5 (ENSMNEG00000044719) #27	TMEM156 (ENSMNEG00000027960) #28	FAM114A1 (ENSMNEG00000044049) #29	TLR1 (ENSMNEG00000004407) #31	TLR10 (ENSMNEG00000015099) #32	TBC1D1 (ENSMNEG00000039653) #34	PTTG2 (ENSMNEG00000042141)	PGM2 (ENSMNEG00000014173) #35	RELL1 (ENSMNEG00000030854) #37	C4orf19 (ENSMNEG00000032287)	NWD2 (ENSMNEG00000038103)
Macaca_a	ANCESTRAL SPECIES	12	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00390000018052.l.a	ENSGT00390000018145.cb.a.a.b.b	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.c #17	ENSGT00670000098059 #18	ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.a.a.a.a.a.b.b.b.c.a	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.k.f #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456.a #33	ENSGT01030000240362	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT01100000263493.a.b.a.a.a.b.b.b.b.c.a	ENSGT00940000156247 #35
Rhesus	MODERN SPECIES	15	APBB2 (ENSMMUG00000012563) #10	NSUN7 (ENSMMUG00000012561) #11	ENSMMUG00000030357	ENSMMUG00000053608	RBM47 (ENSMMUG00000012036) #12	ENSMMUG00000040680	CHRNA9 (ENSMMUG00000030358) #13	RHOH (ENSMMUG00000063857) #14	N4BP2 (ENSMMUG00000002667) #15	PDS5A (ENSMMUG00000011323) #17	UBE2K (ENSMMUG00000011325) #18	ENSMMUG00000060423	SMIM14 (ENSMMUG00000020324) #19	UGDH (ENSMMUG00000001892) #20	LIAS (ENSMMUG00000013851) #21	RPL9 (ENSMMUG00000008553) #22	KLB (ENSMMUG00000008834) #23	RFC1 (ENSMMUG00000009324) #24	ENSMMUG00000050249	WDR19 (ENSMMUG00000002756) #26	KLHL5 (ENSMMUG00000002755) #27	TMEM156 (ENSMMUG00000002419) #28	FAM114A1 (ENSMMUG00000004471) #29	TLR6 (ENSMMUG00000002418) #30	ENSMMUG00000050528	TLR1 (ENSMMUG00000016754) #31	TLR10 (ENSMMUG00000003373) #32	KLF3 (ENSMMUG00000003363) #33	ENSMMUG00000055079	TBC1D1 (ENSMMUG00000000237) #34	ENSMMUG00000060134
Crab-eating macaque	MODERN SPECIES	15	KCTD8 (ENSMFAG00000049846)	GRXCR1 (ENSMFAG00000037806)	ENSMFAG00000056632	ATP8A1 (ENSMFAG00000038620)	SHISA3 (ENSMFAG00000030992)	BEND4 (ENSMFAG00000031463)	SLC30A9 (ENSMFAG00000003491)	DCAF4L1 (ENSMFAG00000004908)	TMEM33 (ENSMFAG00000043209)	PDS5A (ENSMFAG00000043276) #17	UBE2K (ENSMFAG00000030518) #18	ENSMFAG00000062205	SMIM14 (ENSMFAG00000045159) #19	UGDH (ENSMFAG00000038896) #20	LIAS (ENSMFAG00000040861) #21	RPL9 (ENSMFAG00000031293) #22	KLB (ENSMFAG00000003644) #23	RFC1 (ENSMFAG00000041957) #24	WDR19 (ENSMFAG00000001104) #26	KLHL5 (ENSMFAG00000042012) #27	TMEM156 (ENSMFAG00000043228) #28	FAM114A1 (ENSMFAG00000001528) #29	TLR6 (ENSMFAG00000002517) #30	TLR1 (ENSMFAG00000029809) #31	TLR10 (ENSMFAG00000029645) #32	KLF3 (ENSMFAG00000040858) #33	ENSMFAG00000049190	ENSMFAG00000060739	ENSMFAG00000002697 #34	ENSMFAG00000048341	ENSMFAG00000049523
Strepsirrhini	ANCESTRAL SPECIES	18	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a.l #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294.e #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b	ENSGT00940000153404.b
Bushbaby	MODERN SPECIES	136	HTRA1 (ENSOGAG00000010043)	ENSOGAG00000010036	ENSOGAG00000026108	BTBD16 (ENSOGAG00000010035)	TACC2 (ENSOGAG00000010030)	NSMCE4A (ENSOGAG00000010026)	ENSOGAG00000031150	ATE1 (ENSOGAG00000010023)	FGFR2 (ENSOGAG00000012206)	WDR11 (ENSOGAG00000012465)	PLPP4 (ENSOGAG00000016998)	SEC23IP (ENSOGAG00000004948)	MCMBP (ENSOGAG00000009714)	INPP5F (ENSOGAG00000009706)	BAG3 (ENSOGAG00000011421)	ENSOGAG00000011419 #22	TIAL1 (ENSOGAG00000011417)	RGS10 (ENSOGAG00000030571)	GRK5 (ENSOGAG00000002075)	ENSOGAG00000002074	ENSOGAG00000027987	DENND10 (ENSOGAG00000002070)	EIF3A (ENSOGAG00000004580)	NANOS1 (ENSOGAG00000033947)	CACUL1 (ENSOGAG00000006769)	PRLHR (ENSOGAG00000025256)	FAM204A (ENSOGAG00000028541)	RAB11FIP2 (ENSOGAG00000012716)	EMX2 (ENSOGAG00000007277)	PDZD8 (ENSOGAG00000028529)	SLC18A2 (ENSOGAG00000034086)
Lemuriformes	ANCESTRAL SPECIES	77							ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294.e #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b	ENSGT00940000153404.b
Lemuriformes_a	ANCESTRAL SPECIES	172										ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294.e #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b	ENSGT00940000153404.b
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	309							RBM47 (ENSPCOG00000023451) #12	ENSPCOG00000013154	CHRNA9 (ENSPCOG00000000128) #13	N4BP2 (ENSPCOG00000014400) #15	PDS5A (ENSPCOG00000023175) #17	UBE2K (ENSPCOG00000018646) #18	SMIM14 (ENSPCOG00000019337) #19	UGDH (ENSPCOG00000019378) #20	LIAS (ENSPCOG00000015716) #21	ENSPCOG00000026557 #22	KLB (ENSPCOG00000013579) #23	RFC1 (ENSPCOG00000026288) #24	WDR19 (ENSPCOG00000021517) #26	KLHL5 (ENSPCOG00000015675) #27	TMEM156 (ENSPCOG00000012504) #28	FAM114A1 (ENSPCOG00000011196) #29	TLR1 (ENSPCOG00000018202) #31	KLF3 (ENSPCOG00000016691) #33	TBC1D1 (ENSPCOG00000016855) #34	ENSPCOG00000021684	ENSPCOG00000007157	ENSPCOG00000027007 #35	RELL1 (ENSPCOG00000008630) #37	C4orf19 (ENSPCOG00000016434)	NWD2 (ENSPCOG00000016501)
Coquerels sifaka	MODERN SPECIES	530									ZBTB20 (ENSPCOG00000003157)	TIGIT (ENSPCOG00000026075)	DRD3 (ENSPCOG00000015970)	QTRT2 (ENSPCOG00000020933)	CCDC191 (ENSPCOG00000006529)	ZDHHC23 (ENSPCOG00000001779)	GRAMD1C (ENSPCOG00000023974)	ENSPCOG00000012481 #22	ATP6V1A (ENSPCOG00000022129)	NAA50 (ENSPCOG00000020426)	USF3 (ENSPCOG00000007941)	SIDT1 (ENSPCOG00000027407)	SPICE1 (ENSPCOG00000012329)	CFAP44 (ENSPCOG00000016402)	BOC (ENSPCOG00000010920)	ENSPCOG00000026178	ENSPCOG00000016512	ENSPCOG00000015542	ENSPCOG00000027932	CCDC80 (ENSPCOG00000020306)	SLC35A5 (ENSPCOG00000016157)	ATG3 (ENSPCOG00000015390)	BTLA (ENSPCOG00000025192)
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	634													LIAS (ENSPSMG00000015704) #21	ENSPSMG00000015716 #20	ENSPSMG00000015724 #20	ENSPSMG00000015790 #22	KLB (ENSPSMG00000015816) #23	RFC1 (ENSPSMG00000015975) #24	WDR19 (ENSPSMG00000016209) #26	KLHL5 (ENSPSMG00000016261) #27	TMEM156 (ENSPSMG00000016267) #28
Greater bamboo lemur	DUPLICATION
Greater bamboo lemur	MODERN SPECIES	91	GNG11 (ENSPSMG00000010307)	BET1 (ENSPSMG00000010301)	COL1A2 (ENSPSMG00000010279)	CASD1 (ENSPSMG00000010248)	SGCE (ENSPSMG00000009934)	PEG10 (ENSPSMG00000009482)	PPP1R9A (ENSPSMG00000009393)	PON1 (ENSPSMG00000009242)	PON3 (ENSPSMG00000009234)	PON2 (ENSPSMG00000009150)	ASB4 (ENSPSMG00000009059)	PDK4 (ENSPSMG00000009023)	DYNC1I1 (ENSPSMG00000008843)	SLC25A13 (ENSPSMG00000008670)	SEM1 (ENSPSMG00000008611)	ENSPSMG00000008588 #22	DLX6 (ENSPSMG00000008565)	DLX5 (ENSPSMG00000008549)	ENSPSMG00000008537	TAC1 (ENSPSMG00000008520)	ASNS (ENSPSMG00000008375)	C1GALT1 (ENSPSMG00000008239)	COL28A1 (ENSPSMG00000008223)	MIOS (ENSPSMG00000008192)	RPA3 (ENSPSMG00000008161)	UMAD1 (ENSPSMG00000008140)	GLCCI1 (ENSPSMG00000008125)	ICA1 (ENSPSMG00000008028)	NXPH1 (ENSPSMG00000007880)
Greater bamboo lemur	MODERN SPECIES	314	CD180 (ENSPSMG00000003556)	MAST4 (ENSPSMG00000003664)	ENSPSMG00000003794	ENSPSMG00000003798	SREK1 (ENSPSMG00000003839)	ERBIN (ENSPSMG00000004667)	ENSPSMG00000005747	NLN (ENSPSMG00000005800)	SGTB (ENSPSMG00000005863)	TRAPPC13 (ENSPSMG00000005937)	TRIM23 (ENSPSMG00000006136)	PPWD1 (ENSPSMG00000006153)	CENPK (ENSPSMG00000006172)	ADAMTS6 (ENSPSMG00000006192)	CWC27 (ENSPSMG00000006223)	ENSPSMG00000006261 #22	SREK1IP1 (ENSPSMG00000006265)	SHISAL2B (ENSPSMG00000006272)	RGS7BP (ENSPSMG00000006278)	ENSPSMG00000006289
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	10	CHRNA9 (ENSMICG00000035894) #13	RHOH (ENSMICG00000027779) #14	ENSMICG00000038258	N4BP2 (ENSMICG00000046523) #15	ENSMICG00000038120	PDS5A (ENSMICG00000010420) #17	ENSMICG00000030797 #18	ENSMICG00000031377	ENSMICG00000044990	ENSMICG00000037886	ENSMICG00000037144	ENSMICG00000034989 #19	ENSMICG00000028331	UGDH (ENSMICG00000016782) #20	LIAS (ENSMICG00000016781) #21	ENSMICG00000048030 #22	KLB (ENSMICG00000032998) #23	RFC1 (ENSMICG00000016765) #24	WDR19 (ENSMICG00000016727) #26	KLHL5 (ENSMICG00000010463) #27	ENSMICG00000026932	TMEM156 (ENSMICG00000009711) #28	FAM114A1 (ENSMICG00000009696) #29	TLR6 (ENSMICG00000027451) #30	TLR1 (ENSMICG00000032867) #31	KLF3 (ENSMICG00000000339) #33
Mouse lemur	MODERN SPECIES	169	ENSMICG00000032242	ENSMICG00000005713	CNGA2 (ENSMICG00000046266)	FATE1 (ENSMICG00000047061)	PRRG3 (ENSMICG00000030324)	ENSMICG00000043308	VMA21 (ENSMICG00000030051)	ENSMICG00000045012	ENSMICG00000029488	MAMLD1 (ENSMICG00000017610)	MTM1 (ENSMICG00000033650)	MTMR1 (ENSMICG00000004344)	ENSMICG00000015345	CD99L2 (ENSMICG00000004350)	GPR50 (ENSMICG00000034484)	ENSMICG00000028536 #22	ENSMICG00000045791	ENSMICG00000004639	ENSMICG00000029869	ENSMICG00000047372	ENSMICG00000045027	ENSMICG00000033654	ENSMICG00000047230	ENSMICG00000032768	ENSMICG00000045504	IDS (ENSMICG00000002745)	ENSMICG00000037019	ENSMICG00000030676	ENSMICG00000036932	AFF2 (ENSMICG00000011580)	ENSMICG00000004052
Mouse lemur	MODERN SPECIES	21	ADH4 (ENSMICG00000006121)	ENSMICG00000006437	ENSMICG00000043541	ADH7 (ENSMICG00000003495)	C4orf17 (ENSMICG00000003501)	TRMT10A (ENSMICG00000003507)	MTTP (ENSMICG00000003510)	C4orf54 (ENSMICG00000031131)	DAPP1 (ENSMICG00000036755)	LAMTOR3 (ENSMICG00000029537)	DNAJB14 (ENSMICG00000002463)	ENSMICG00000002469	DDIT4L (ENSMICG00000034039)	EMCN (ENSMICG00000028542)	PPP3CA (ENSMICG00000001852)	ENSMICG00000027738 #22	ENSMICG00000040746	SLC39A8 (ENSMICG00000006095)	NFKB1 (ENSMICG00000014491)	ENSMICG00000034109	MANBA (ENSMICG00000000840)	ENSMICG00000036490	ENSMICG00000047325	ENSMICG00000037744	ENSMICG00000031142	ENSMICG00000044116	ENSMICG00000016261	SMARCAD1 (ENSMICG00000009746)	ENSMICG00000047185	GRID2 (ENSMICG00000004045)	ENSMICG00000031176
Euarchontoglires_A	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Tree shrew	DUPLICATION
Tree shrew	DUPLICATION
Tree shrew	DUPLICATION
Tree shrew	DUPLICATION
Tree shrew	DUPLICATION
Tree shrew	MODERN SPECIES	8847																ENSTBEG00000000339 #22
Tree shrew	MODERN SPECIES	7516																ENSTBEG00000013791 #22
Tree shrew	MODERN SPECIES	6467																ENSTBEG00000016586 #22
Tree shrew	MODERN SPECIES	3130														ENSTBEG00000007280 #20	LIAS (ENSTBEG00000006400) #21	ENSTBEG00000006042 #22	KLB (ENSTBEG00000005041) #23	RFC1 (ENSTBEG00000003087) #24	WDR19 (ENSTBEG00000008475) #26	KLHL5 (ENSTBEG00000007829) #27	ENSTBEG00000007521 #28	FAM114A1 (ENSTBEG00000006251) #29
Tree shrew	MODERN SPECIES	7168																ENSTBEG00000002164 #22
Tree shrew	MODERN SPECIES	2299															ZMYM4 (ENSTBEG00000012066)	ENSTBEG00000011986 #22
Glires	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Rodentia	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Rodentia_A	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Hystricomorpha	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Naked mole-rat female	MODERN SPECIES	27	ENSHGLG00000002235	ENSHGLG00000002271	ENSHGLG00000002300	NETO2 (ENSHGLG00000002342)	ITFG1 (ENSHGLG00000002469)	PHKB (ENSHGLG00000002597)	ENSHGLG00000032846	ENSHGLG00000012004	ENSHGLG00000048126	ENSHGLG00000047723	ENSHGLG00000039002	ENSHGLG00000003031	ENSHGLG00000048075	ENSHGLG00000003081	SIAH1 (ENSHGLG00000003142)	ENSHGLG00000003222 #22	ENSHGLG00000019576	ENSHGLG00000044802	ENSHGLG00000011825	ENSHGLG00000018200	CHST2 (ENSHGLG00000041521)	U2SURP (ENSHGLG00000017227)	PAQR9 (ENSHGLG00000017213)	PCOLCE2 (ENSHGLG00000017054)	ENSHGLG00000048356	TRPC1 (ENSHGLG00000017039)	ATR (ENSHGLG00000016875)	XRN1 (ENSHGLG00000014476)	GK5 (ENSHGLG00000014374)	ENSHGLG00000033455	TFDP2 (ENSHGLG00000013441)
Rodentia_B	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Myomorpha	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Muroidea	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Muroidea_A	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Murinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Rat	MODERN SPECIES	7	Tusc3 (ENSRNOG00000013061)	AABR07025986.2 (ENSRNOG00000057716)	AABR07026002.1 (ENSRNOG00000032376)	Dlc1 (ENSRNOG00000010780)	Trmt9b (ENSRNOG00000011253)	ENSRNOG00000066954	Lonrf1 (ENSRNOG00000053706)	Prag1 (ENSRNOG00000011407)	Cldn23 (ENSRNOG00000011424)	LOC100910088 (ENSRNOG00000054809)	Mfhas1 (ENSRNOG00000011431)	Eri1 (ENSRNOG00000011448)	Ppp1r3b (ENSRNOG00000011474)	Tnks (ENSRNOG00000011625)	Dusp4 (ENSRNOG00000011921)	AABR07026048.1 (ENSRNOG00000031879) #22	Saraf (ENSRNOG00000012329)	Leprotl1 (ENSRNOG00000012601)	Mboat4 (ENSRNOG00000030102)	Dctn6 (ENSRNOG00000013254)	LOC100364509 (ENSRNOG00000050067)	AABR07026059.1 (ENSRNOG00000031959)	Rbpms (ENSRNOG00000013328)	Gtf2e2 (ENSRNOG00000014422)	Smim18 (ENSRNOG00000049689)	ENSRNOG00000070491	Gsr (ENSRNOG00000014915)	Ubxn8 (ENSRNOG00000015109)	Ppp2cb (ENSRNOG00000015182)	Tex15 (ENSRNOG00000007748)	Purg (ENSRNOG00000015426)
Cricetidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Cricetinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a #22
Golden Hamster	MODERN SPECIES	666	Bbx (ENSMAUG00000012741)	Cd47 (ENSMAUG00000009968)	Ift57 (ENSMAUG00000001803)	Myh15 (ENSMAUG00000002083)	Cip2a (ENSMAUG00000000178)	Dzip3 (ENSMAUG00000016010)	ENSMAUG00000014727	ENSMAUG00000018846	Retnlb (ENSMAUG00000017128)	Trat1 (ENSMAUG00000000687)	Morc1 (ENSMAUG00000014778)	Gm5485 (ENSMAUG00000013620)	ENSMAUG00000011148	Dppa4 (ENSMAUG00000015913)	ENSMAUG00000013101	ENSMAUG00000012459 #22	Nectin3 (ENSMAUG00000000044)	Cd96 (ENSMAUG00000015667)	Plcxd2 (ENSMAUG00000011354)	Phldb2 (ENSMAUG00000010422)	Abhd10 (ENSMAUG00000007568)	Tagln3 (ENSMAUG00000004829)	Tmprss7 (ENSMAUG00000009970)	BC016579 (ENSMAUG00000010379)	Gcsam (ENSMAUG00000009420)	Slc9c1 (ENSMAUG00000014273)	ENSMAUG00000012530	Cd200 (ENSMAUG00000006867)	Btla (ENSMAUG00000010961)	Atg3 (ENSMAUG00000009927)	Slc35a5 (ENSMAUG00000000168)
Laurasiatheria	ANCESTRAL SPECIES	11	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT01000000219986	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Laurasiatheria_a	ANCESTRAL SPECIES	8	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT01000000219986	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Laurasiatheria_b	ANCESTRAL SPECIES	8	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT01000000219986	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Carnivora	ANCESTRAL SPECIES	5	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Caniformia	ANCESTRAL SPECIES	7	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Canidae	ANCESTRAL SPECIES	21	ENSGT00390000003220	ENSGT00390000017955.c.o.b	ENSGT00940000153713.B.c	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b
Red fox	MODERN SPECIES	1	ENSVVUG00000014831 #9	ENSVVUG00000014827	APBB2 (ENSVVUG00000014809) #10	NSUN7 (ENSVVUG00000014781) #11	RBM47 (ENSVVUG00000014774) #12	CHRNA9 (ENSVVUG00000014771) #13	ENSVVUG00000014768	N4BP2 (ENSVVUG00000014762) #15	ENSVVUG00000014758	ENSVVUG00000014754	PDS5A (ENSVVUG00000014731) #17	UBE2K (ENSVVUG00000014727) #18	SMIM14 (ENSVVUG00000014725) #19	UGDH (ENSVVUG00000014723) #20	LIAS (ENSVVUG00000014701) #21	RPL9 (ENSVVUG00000014677) #22	KLB (ENSVVUG00000014671) #23	RFC1 (ENSVVUG00000014641) #24	WDR19 (ENSVVUG00000014618) #26	KLHL5 (ENSVVUG00000014573) #27	TMEM156 (ENSVVUG00000014555) #28	FAM114A1 (ENSVVUG00000014548) #29	TLR6 (ENSVVUG00000014537) #30	TLR1 (ENSVVUG00000014535) #31	TLR10 (ENSVVUG00000014533) #32	KLF3 (ENSVVUG00000014522) #33	TBC1D1 (ENSVVUG00000014485) #34	PGM2 (ENSVVUG00000014454) #35	RELL1 (ENSVVUG00000014443) #37	ENSVVUG00000014438	NWD2 (ENSVVUG00000014429)
Canis_lupus	ANCESTRAL SPECIES	23	ENSGT00390000003220	ENSGT00390000017955.c.o.b	ENSGT00940000153713.B.c	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b
Dog	MODERN SPECIES	22	ENSCAFG00845003840	ENSCAFG00845003847	ENSCAFG00845003870 #9	APBB2 (ENSCAFG00845003917) #10	NSUN7 (ENSCAFG00845003943) #11	RBM47 (ENSCAFG00845003991) #12	CHRNA9 (ENSCAFG00845004059) #13	RHOH (ENSCAFG00845004084) #14	N4BP2 (ENSCAFG00845004157) #15	ENSCAFG00845004204	PDS5A (ENSCAFG00845004259) #17	ENSCAFG00845004455	UBE2K (ENSCAFG00845004479) #18	SMIM14 (ENSCAFG00845004549) #20	LIAS (ENSCAFG00845004611) #21	RPL9 (ENSCAFG00845004647) #22	KLB (ENSCAFG00845004657) #23	RFC1 (ENSCAFG00845004687) #24	WDR19 (ENSCAFG00845004729) #26	KLHL5 (ENSCAFG00845004801) #27	TMEM156 (ENSCAFG00845004925) #28	FAM114A1 (ENSCAFG00845004930) #29	TLR1 (ENSCAFG00845004950) #31	KLF3 (ENSCAFG00845004980) #33	TBC1D1 (ENSCAFG00845005015) #34	ENSCAFG00845005098	PGM2 (ENSCAFG00845005108) #35	RELL1 (ENSCAFG00845005126) #37	ENSCAFG00845005184	NWD2 (ENSCAFG00845005206)	ENSCAFG00845005226
Dingo	MODERN SPECIES	138	JAKMIP1 (ENSCAFG00020010644)	UCHL1 (ENSCAFG00020010640) #9	APBB2 (ENSCAFG00020010619) #10	ENSCAFG00020010603	ENSCAFG00020010582 #11	RBM47 (ENSCAFG00020010558) #12	CHRNA9 (ENSCAFG00020010556) #13	RHOH (ENSCAFG00020010553) #14	ENSCAFG00020010539	N4BP2 (ENSCAFG00020010537) #15	PDS5A (ENSCAFG00020002596) #17	UBE2K (ENSCAFG00020002201) #18	SMIM14 (ENSCAFG00020002193) #19	UGDH (ENSCAFG00020002184) #20	LIAS (ENSCAFG00020002177) #21	RPL9 (ENSCAFG00020002170) #22	KLB (ENSCAFG00020002162) #23	RFC1 (ENSCAFG00020001300) #24	WDR19 (ENSCAFG00020000755) #26	KLHL5 (ENSCAFG00020000397) #27	TMEM156 (ENSCAFG00020000358) #28	FAM114A1 (ENSCAFG00020000247) #29	TLR6 (ENSCAFG00020000234) #30	TLR1 (ENSCAFG00020000220) #31	ENSCAFG00020000157	TLR10 (ENSCAFG00020027421) #32	KLF3 (ENSCAFG00020027419) #33	TBC1D1 (ENSCAFG00020027410) #34	PGM2 (ENSCAFG00020027401) #35	RELL1 (ENSCAFG00020027397) #37	NWD2 (ENSCAFG00020027393)
Caniformia_b	ANCESTRAL SPECIES	5	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Mustelinae	ANCESTRAL SPECIES	63	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00910000147100	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000169973	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
American mink	MODERN SPECIES	44	LIMCH1 (ENSNVIG00000005858) #7	UCHL1 (ENSNVIG00000006217) #9	APBB2 (ENSNVIG00000006290) #10	NSUN7 (ENSNVIG00000006560) #11	ENSNVIG00000006583	RBM47 (ENSNVIG00000006604) #12	CHRNA9 (ENSNVIG00000006627) #13	RHOH (ENSNVIG00000006637) #14	N4BP2 (ENSNVIG00000006668) #15	PDS5A (ENSNVIG00000006693) #17	ENSNVIG00000006776	UBE2K (ENSNVIG00000006784) #18	SMIM14 (ENSNVIG00000006857) #19	UGDH (ENSNVIG00000006882) #20	LIAS (ENSNVIG00000006909) #21	RPL9 (ENSNVIG00000007001) #22	KLB (ENSNVIG00000007042) #23	RFC1 (ENSNVIG00000007060) #24	WDR19 (ENSNVIG00000007285) #26	KLHL5 (ENSNVIG00000007493) #27	TMEM156 (ENSNVIG00000007526) #28	FAM114A1 (ENSNVIG00000007542) #29	TLR6 (ENSNVIG00000007548) #30	TLR1 (ENSNVIG00000007556) #31	KLF3 (ENSNVIG00000007568) #33	ENSNVIG00000007582 #34	ENSNVIG00000007594	ENSNVIG00000007613	PGM2 (ENSNVIG00000007633) #35	RELL1 (ENSNVIG00000007645) #37	ENSNVIG00000007667
Ferret	DUPLICATION
Ferret	DUPLICATION
Ferret	MODERN SPECIES	314					OR5A2 (ENSMPUG00000020016)	OR5A1 (ENSMPUG00000020014)	OR4D6 (ENSMPUG00000020012)	ENSMPUG00000020010	OR4D10 (ENSMPUG00000020007)	OR4D11 (ENSMPUG00000020006)	OR4D9 (ENSMPUG00000020004)	ENSMPUG00000020002	OSBP (ENSMPUG00000014610)	PATL1 (ENSMPUG00000014607)	ENSMPUG00000014603	ENSMPUG00000020000 #22	OR10V1 (ENSMPUG00000014599)	ENSMPUG00000014595	STX3 (ENSMPUG00000014594)	MRPL16 (ENSMPUG00000014583)	CBLIF (ENSMPUG00000014566)	TCN1 (ENSMPUG00000014561)	OOSP2 (ENSMPUG00000014555)	MS4A3 (ENSMPUG00000014552)	MS4A2 (ENSMPUG00000014543)	ENSMPUG00000014541	ENSMPUG00000014537	ENSMPUG00000014533	ENSMPUG00000014528	ENSMPUG00000014523	ENSMPUG00000014517
Ferret	MODERN SPECIES	332			ENSMPUG00000012594	TLE4 (ENSMPUG00000012590)	ENSMPUG00000012588	PSAT1 (ENSMPUG00000012566)	CEP78 (ENSMPUG00000012559)	GNAQ (ENSMPUG00000012554)	GNA14 (ENSMPUG00000012547)	VPS13A (ENSMPUG00000012524)	FOXB2 (ENSMPUG00000012521)	PRUNE2 (ENSMPUG00000012517)	GCNT1 (ENSMPUG00000018578)	RFK (ENSMPUG00000012511)	PCSK5 (ENSMPUG00000012343)	ENSMPUG00000018576 #22	OSTF1 (ENSMPUG00000012340)	NMRK1 (ENSMPUG00000012337)	CARNMT1 (ENSMPUG00000012334)
Ferret	MODERN SPECIES	263	SLC30A9 (ENSMPUG00000006465)	ENSMPUG00000006459	LIMCH1 (ENSMPUG00000006226) #7	UCHL1 (ENSMPUG00000006212) #9	APBB2 (ENSMPUG00000006192) #10	NSUN7 (ENSMPUG00000006183) #11	RBM47 (ENSMPUG00000006177) #12	CHRNA9 (ENSMPUG00000006127) #13	RHOH (ENSMPUG00000020157) #14	N4BP2 (ENSMPUG00000006110) #15	PDS5A (ENSMPUG00000006091) #17	UBE2K (ENSMPUG00000006082) #18	SMIM14 (ENSMPUG00000006076) #19	UGDH (ENSMPUG00000006070) #20	LIAS (ENSMPUG00000006063) #21	ENSMPUG00000006054 #22	KLB (ENSMPUG00000006050) #23	RFC1 (ENSMPUG00000006033) #24	WDR19 (ENSMPUG00000006011) #26	KLHL5 (ENSMPUG00000005999) #27	TMEM156 (ENSMPUG00000005993) #28	FAM114A1 (ENSMPUG00000005978) #29	TLR6 (ENSMPUG00000020156) #30	TLR1 (ENSMPUG00000020155) #31	KLF3 (ENSMPUG00000005968) #33	ENSMPUG00000005960	TBC1D1 (ENSMPUG00000005936) #34	PGM2 (ENSMPUG00000005926) #35	ENSMPUG00000005920	RELL1 (ENSMPUG00000005911) #37	C4orf19 (ENSMPUG00000005904)
Ursidae	ANCESTRAL SPECIES	29	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a.t #7	ENSGT00940000157306.d #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155.b #17	ENSGT00670000098059 #18	ENSGT00390000018294.b #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	2	TMEM33 (ENSAMEG00000013043)	PHOX2B (ENSAMEG00000013045)	LIMCH1 (ENSAMEG00000013049) #7	UCHL1 (ENSAMEG00000023730) #9	APBB2 (ENSAMEG00000017210) #10	NSUN7 (ENSAMEG00000017204) #11	RBM47 (ENSAMEG00000009672) #12	CHRNA9 (ENSAMEG00000009679) #13	RHOH (ENSAMEG00000018478) #14	N4BP2 (ENSAMEG00000009686) #15	PDS5A (ENSAMEG00000002989) #17	UBE2K (ENSAMEG00000003103) #18	SMIM14 (ENSAMEG00000003122) #19	UGDH (ENSAMEG00000003124) #20	LIAS (ENSAMEG00000003154) #21	RPL9 (ENSAMEG00000003187) #22	KLB (ENSAMEG00000003214) #23	RFC1 (ENSAMEG00000003216) #24	WDR19 (ENSAMEG00000003268) #26	KLHL5 (ENSAMEG00000003311) #27	TMEM156 (ENSAMEG00000010032) #28	ENSAMEG00000019419	FAM114A1 (ENSAMEG00000010034) #29	TLR6 (ENSAMEG00000018483) #30	TLR1 (ENSAMEG00000018486) #31	TLR10 (ENSAMEG00000018488) #32	KLF3 (ENSAMEG00000010056) #33	TBC1D1 (ENSAMEG00000011195) #34	PGM2 (ENSAMEG00000011214) #35	RELL1 (ENSAMEG00000011264) #37	C4orf19 (ENSAMEG00000011277)
Giant Panda	MODERN SPECIES	1437																ENSAMEG00000026040 #22
Ursus	ANCESTRAL SPECIES	51	ENSGT00390000008346	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a.t #7	ENSGT00940000157306.d #9	ENSGT00390000000002.a.a.a #10	ENSGT00510000047678.f	ENSGT00940000157352 #11	ENSGT00940000156077 #13	ENSGT00940000160604 #15	ENSGT00940000155155.b #17	ENSGT00670000098059 #18	ENSGT00390000018294.b #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b
Polar bear	MODERN SPECIES	234	ENSUMAG00000001265	ENSUMAG00000001210 #7	ENSUMAG00000001196 #7	ENSUMAG00000001183 #7	UCHL1 (ENSUMAG00000001146) #9	APBB2 (ENSUMAG00000001137) #10	ENSUMAG00000001127	NSUN7 (ENSUMAG00000001120) #11	CHRNA9 (ENSUMAG00000001096) #13	N4BP2 (ENSUMAG00000000940) #15	PDS5A (ENSUMAG00000000906) #17	UBE2K (ENSUMAG00000000891) #18	SMIM14 (ENSUMAG00000000880) #19	UGDH (ENSUMAG00000000873) #20	LIAS (ENSUMAG00000000868) #21	RPL9 (ENSUMAG00000000865) #22	KLB (ENSUMAG00000000859) #23	ENSUMAG00000000849 #24	WDR19 (ENSUMAG00000000811) #26	KLHL5 (ENSUMAG00000000796) #27	TMEM156 (ENSUMAG00000000785) #28	FAM114A1 (ENSUMAG00000000608) #29	TLR6 (ENSUMAG00000000603) #30	TLR1 (ENSUMAG00000000600) #31	TLR10 (ENSUMAG00000000597) #32	KLF3 (ENSUMAG00000000566) #33	TBC1D1 (ENSUMAG00000000544) #34	PGM2 (ENSUMAG00000000534) #35	RELL1 (ENSUMAG00000000523) #37	C4orf19 (ENSUMAG00000000513)	NWD2 (ENSUMAG00000000454)
Felidae	ANCESTRAL SPECIES	4	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Cat	MODERN SPECIES	235	LIMCH1 (ENSFCAG00000007444) #7	UCHL1 (ENSFCAG00000025457) #9	APBB2 (ENSFCAG00000012843) #10	NSUN7 (ENSFCAG00000012841) #11	ENSFCAG00000046888	RBM47 (ENSFCAG00000012399) #12	CHRNA9 (ENSFCAG00000035547) #13	RHOH (ENSFCAG00000012394) #14	N4BP2 (ENSFCAG00000024887) #15	PDS5A (ENSFCAG00000003209) #17	UBE2K (ENSFCAG00000033193) #18	ENSFCAG00000024033	SMIM14 (ENSFCAG00000032694) #19	UGDH (ENSFCAG00000009600) #20	LIAS (ENSFCAG00000023567) #21	RPL9 (ENSFCAG00000012284) #22	KLB (ENSFCAG00000026771) #23	RFC1 (ENSFCAG00000001781) #24	WDR19 (ENSFCAG00000001779) #26	KLHL5 (ENSFCAG00000003534) #27	TMEM156 (ENSFCAG00000028887) #28	FAM114A1 (ENSFCAG00000027380) #29	TLR6 (ENSFCAG00000040731) #30	TLR1 (ENSFCAG00000031748) #31	TLR10 (ENSFCAG00000007666) #32	KLF3 (ENSFCAG00000028338) #33	TBC1D1 (ENSFCAG00000052530) #34	PGM2 (ENSFCAG00000004734) #35	RELL1 (ENSFCAG00000000032) #37	CB1H4orf19 (ENSFCAG00000000031)	ENSFCAG00000050369
Panthera	ANCESTRAL SPECIES	5	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00510000046985.h.b.a.a.b	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Tiger	MODERN SPECIES	594	TMEM33 (ENSPTIG00000012144)	PHOX2B (ENSPTIG00000011693)	LIMCH1 (ENSPTIG00000012731) #7	UCHL1 (ENSPTIG00000008888) #9	APBB2 (ENSPTIG00000020993) #10	NSUN7 (ENSPTIG00000018737) #11	RBM47 (ENSPTIG00000017046) #12	CHRNA9 (ENSPTIG00000016155) #13	N4BP2 (ENSPTIG00000010894) #15	PDS5A (ENSPTIG00000008510) #17	UBE2K (ENSPTIG00000005741) #18	ENSPTIG00000002303	SMIM14 (ENSPTIG00000022111) #19	UGDH (ENSPTIG00000022044) #20	LIAS (ENSPTIG00000018893) #21	RPL9 (ENSPTIG00000016915) #22	KLB (ENSPTIG00000015870) #23	RFC1 (ENSPTIG00000001431) #24	WDR19 (ENSPTIG00000018168) #26	KLHL5 (ENSPTIG00000014854) #27	TMEM156 (ENSPTIG00000014002) #28	FAM114A1 (ENSPTIG00000013333) #29	TLR10 (ENSPTIG00000001074) #32	KLF3 (ENSPTIG00000010267) #33	ENSPTIG00000008001 #34	ENSPTIG00000007473	PGM2 (ENSPTIG00000005900) #35	RELL1 (ENSPTIG00000002277) #37	ENSPTIG00000021795	ENSPTIG00000021676	NWD2 (ENSPTIG00000021488)
Panthera_a	ANCESTRAL SPECIES	2	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00510000046985.h.b.a.a.b	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
lion	MODERN SPECIES	4	LIMCH1 (ENSPLOG00000000891) #7	ENSPLOG00000000725	UCHL1 (ENSPLOG00000000699) #9	APBB2 (ENSPLOG00000000600) #10	NSUN7 (ENSPLOG00000000508) #11	RBM47 (ENSPLOG00000000470) #12	CHRNA9 (ENSPLOG00000005632) #13	RHOH (ENSPLOG00000005619) #14	N4BP2 (ENSPLOG00000005589) #15	PDS5A (ENSPLOG00000005525) #17	UBE2K (ENSPLOG00000005370) #18	ENSPLOG00000005334	SMIM14 (ENSPLOG00000005321) #19	UGDH (ENSPLOG00000005243) #20	LIAS (ENSPLOG00000004953) #21	RPL9 (ENSPLOG00000004792) #22	KLB (ENSPLOG00000004769) #23	RFC1 (ENSPLOG00000004695) #24	WDR19 (ENSPLOG00000004667) #26	KLHL5 (ENSPLOG00000004620) #27	TMEM156 (ENSPLOG00000004607) #28	FAM114A1 (ENSPLOG00000004570) #29	TLR6 (ENSPLOG00000004553) #30	TLR1 (ENSPLOG00000004546) #31	TLR10 (ENSPLOG00000004541) #32	KLF3 (ENSPLOG00000004534) #33	TBC1D1 (ENSPLOG00000004515) #34	PGM2 (ENSPLOG00000004494) #35	RELL1 (ENSPLOG00000004477) #37	C4orf19 (ENSPLOG00000004462)	ENSPLOG00000004455
leopard	MODERN SPECIES	2	PHOX2B (ENSPPRG00000002711)	LIMCH1 (ENSPPRG00000001941) #7	UCHL1 (ENSPPRG00000015722) #9	APBB2 (ENSPPRG00000014629) #10	NSUN7 (ENSPPRG00000013123) #11	RBM47 (ENSPPRG00000012873) #12	CHRNA9 (ENSPPRG00000012569) #13	RHOH (ENSPPRG00000021637) #14	N4BP2 (ENSPPRG00000012307) #15	PDS5A (ENSPPRG00000012130) #17	UBE2K (ENSPPRG00000010616) #18	ENSPPRG00000021536	SMIM14 (ENSPPRG00000010400) #19	UGDH (ENSPPRG00000010259) #20	LIAS (ENSPPRG00000008627) #21	RPL9 (ENSPPRG00000007091) #22	KLB (ENSPPRG00000007026) #23	RFC1 (ENSPPRG00000006934) #24	WDR19 (ENSPPRG00000006247) #26	KLHL5 (ENSPPRG00000005716) #27	TMEM156 (ENSPPRG00000005087) #28	FAM114A1 (ENSPPRG00000004957) #29	TLR10 (ENSPPRG00000021395) #32	KLF3 (ENSPPRG00000004253) #33	ENSPPRG00000003848 #34	ENSPPRG00000003770	PGM2 (ENSPPRG00000003729) #35	RELL1 (ENSPPRG00000003638) #37	C4orf19 (ENSPPRG00000003516)	ENSPPRG00000021317	NWD2 (ENSPPRG00000003426)
Artiodactyla	ANCESTRAL SPECIES	12	ENSGT00940000159958	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Suina	ANCESTRAL SPECIES	33	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Chacoan peccary	MODERN SPECIES	960	TMEM33 (ENSCWAG00000018907)	PHOX2B (ENSCWAG00000018886)	LIMCH1 (ENSCWAG00000018166) #7	UCHL1 (ENSCWAG00000018037) #9	APBB2 (ENSCWAG00000017473) #10	NSUN7 (ENSCWAG00000017278) #11	RBM47 (ENSCWAG00000017147) #12	CHRNA9 (ENSCWAG00000017085) #13	RHOH (ENSCWAG00000017069) #14	N4BP2 (ENSCWAG00000017047) #15	PDS5A (ENSCWAG00000016809) #17	UBE2K (ENSCWAG00000016683) #18	SMIM14 (ENSCWAG00000016633) #19	UGDH (ENSCWAG00000016520) #20	LIAS (ENSCWAG00000016250) #21	RPL9 (ENSCWAG00000016158) #22	KLB (ENSCWAG00000016100) #23	RFC1 (ENSCWAG00000016016) #24	WDR19 (ENSCWAG00000015737) #26	KLHL5 (ENSCWAG00000015363) #27	TMEM156 (ENSCWAG00000015295) #28	FAM114A1 (ENSCWAG00000015256) #29	TLR6 (ENSCWAG00000015241) #30	TLR1 (ENSCWAG00000015227) #31	TLR10 (ENSCWAG00000015213) #32	KLF3 (ENSCWAG00000015160) #33	TBC1D1 (ENSCWAG00000015011) #34	ENSCWAG00000014989	PGM2 (ENSCWAG00000014943) #35	RELL1 (ENSCWAG00000014911) #37	C4orf19 (ENSCWAG00000014871)
Pig	DUPLICATION
Pig	MODERN SPECIES	16	UCHL1 (ENSSSCG00000022945) #9	APBB2 (ENSSSCG00000022168) #10	NSUN7 (ENSSSCG00000024496) #11	ENSSSCG00000045169	RBM47 (ENSSSCG00000008796) #12	CHRNA9 (ENSSSCG00000024428) #13	RHOH (ENSSSCG00000008794) #14	N4BP2 (ENSSSCG00000008792) #15	ENSSSCG00000036025	ENSSSCG00000053790	PDS5A (ENSSSCG00000023112) #17	UBE2K (ENSSSCG00000033602) #18	SMIM14 (ENSSSCG00000021793) #19	UGDH (ENSSSCG00000030150) #20	LIAS (ENSSSCG00000029385) #21	RPL9 (ENSSSCG00000061243) #22	KLB (ENSSSCG00000026297) #23	RFC1 (ENSSSCG00000008788) #24	WDR19 (ENSSSCG00000008789) #26	KLHL5 (ENSSSCG00000008787) #27	TMEM156 (ENSSSCG00000023785) #28	TLR6 (ENSSSCG00000026592) #30	TLR1 (ENSSSCG00000026583) #31	TLR10 (ENSSSCG00000027877) #32	FAM114A1 (ENSSSCG00000008785) #29	ENSSSCG00000035208	KLF3 (ENSSSCG00000036488) #33	TBC1D1 (ENSSSCG00000028983) #34	PGM2 (ENSSSCG00000008773) #35	RELL1 (ENSSSCG00000008772) #37	C4orf19 (ENSSSCG00000008771)
Pig	MODERN SPECIES	300	CYSLTR1 (ENSSSCG00000039203)	TAF9B (ENSSSCG00000026714)	PGK1 (ENSSSCG00000012440)	ENSSSCG00000030886	ATP7A (ENSSSCG00000012437)	COX7B (ENSSSCG00000032129)	MAGT1 (ENSSSCG00000012435)	ATRX (ENSSSCG00000012434)	FGF16 (ENSSSCG00000022833)	ENSSSCG00000044504	ENSSSCG00000031428	ENSSSCG00000061476	ENSSSCG00000045569	PBDC1 (ENSSSCG00000030577)	MAGEE2 (ENSSSCG00000062125)	ENSSSCG00000012427 #22	ZDHHC15 (ENSSSCG00000012426)	UPRT (ENSSSCG00000012425)	ABCB7 (ENSSSCG00000012424)	NEXMIF (ENSSSCG00000035689)	ENSSSCG00000051237	RLIM (ENSSSCG00000028538)	ENSSSCG00000045470	SLC16A2 (ENSSSCG00000029458)	ZCCHC13 (ENSSSCG00000035737)	CHIC1 (ENSSSCG00000012416)	CDX4 (ENSSSCG00000021225)	NAP1L2 (ENSSSCG00000012415)	ENSSSCG00000031849	ENSSSCG00000032167	ENSSSCG00000053499
Artiodactyla_a	ANCESTRAL SPECIES	12	ENSGT00940000159958	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Artiodactyla_b	ANCESTRAL SPECIES	16	ENSGT00940000159958	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Pecora	ANCESTRAL SPECIES	15	ENSGT00940000159958	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000157949.c.b #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Yarkand deer	MODERN SPECIES	8	UCHL1 (ENSCHYG00000019339) #9	ENSCHYG00000019295	APBB2 (ENSCHYG00000018748) #10	NSUN7 (ENSCHYG00000018520) #11	RBM47 (ENSCHYG00000018372) #12	CHRNA9 (ENSCHYG00000018325) #13	RHOH (ENSCHYG00000018262) #14	N4BP2 (ENSCHYG00000018152) #15	PDS5A (ENSCHYG00000017602) #17	ENSCHYG00000017511	UBE2K (ENSCHYG00000017186) #18	ENSCHYG00000017140	ENSCHYG00000017114	UGDH (ENSCHYG00000016766) #20	ENSCHYG00000015244 #21	RPL9 (ENSCHYG00000014866) #22	ENSCHYG00000014844	KLB (ENSCHYG00000014744) #23	RFC1 (ENSCHYG00000014461) #24	WDR19 (ENSCHYG00000013487) #26	KLHL5 (ENSCHYG00000012983) #27	TMEM156 (ENSCHYG00000012866) #28	FAM114A1 (ENSCHYG00000012688) #29	TLR6 (ENSCHYG00000012665) #30	TLR1 (ENSCHYG00000012651) #31	TLR10 (ENSCHYG00000012632) #32	KLF3 (ENSCHYG00000012587) #33	ENSCHYG00000012569	ENSCHYG00000012545	TBC1D1 (ENSCHYG00000011548) #34	PGM2 (ENSCHYG00000011452) #35
Percora_a	ANCESTRAL SPECIES	18	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000157949.c.b #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Bovidae	DUPLICATION
Bovidae	DUPLICATION
Bovidae	DUPLICATION
Bovidae	ANCESTRAL SPECIES	18	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000157949.c.b #34	ENSGT00940000156247 #35	ENSGT00940000153446.a.a.f
Caprinae	ANCESTRAL SPECIES	13	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00940000154349.fb.b	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358.l.a #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT00940000157949.c.b #34	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778	ENSGT00940000153648.b
Goat	DUPLICATION
Goat	DUPLICATION
Goat	DUPLICATION
Goat	MODERN SPECIES	25	ENSCHIG00000010597	APBB2 (ENSCHIG00000024058) #10	NSUN7 (ENSCHIG00000015126) #11	RBM47 (ENSCHIG00000026214) #12	CHRNA9 (ENSCHIG00000017361) #13	RHOH (ENSCHIG00000007476) #14	ENSCHIG00000003545	N4BP2 (ENSCHIG00000019740) #15	ENSCHIG00000002503	ENSCHIG00000017584	PDS5A (ENSCHIG00000026126) #17	UBE2K (ENSCHIG00000017033) #18	SMIM14 (ENSCHIG00000025451) #19	UGDH (ENSCHIG00000024923) #20	LIAS (ENSCHIG00000014912) #21	ENSCHIG00000011416 #22	KLB (ENSCHIG00000024250) #23	RFC1 (ENSCHIG00000019925) #24	WDR19 (ENSCHIG00000013702) #26	ENSCHIG00000017310	ENSCHIG00000024874 #27	ENSCHIG00000012341 #27	TMEM156 (ENSCHIG00000012783) #28	FAM114A1 (ENSCHIG00000022521) #29	TLR6 (ENSCHIG00000022377) #30	TLR10 (ENSCHIG00000010004) #32	KLF3 (ENSCHIG00000023066) #33	ENSCHIG00000008333 #34	PGM2 (ENSCHIG00000015657) #35	ENSCHIG00000022059	RELL1 (ENSCHIG00000005379) #37
Goat	MODERN SPECIES	27	SORBS3 (ENSCHIG00000003972)	PDLIM2 (ENSCHIG00000013684)	CCAR2 (ENSCHIG00000007510)	BIN3 (ENSCHIG00000020329)	EGR3 (ENSCHIG00000022674)	PEBP4 (ENSCHIG00000018763)	RHOBTB2 (ENSCHIG00000010021)	ENSCHIG00000015870	ENSCHIG00000026442	ENSCHIG00000021504	ENSCHIG00000024704	R3HCC1 (ENSCHIG00000009107)	LOXL2 (ENSCHIG00000015358)	ENTPD4 (ENSCHIG00000017608)	SLC25A37 (ENSCHIG00000009638)	ENSCHIG00000010457 #22	ENSCHIG00000009620	NKX3-1 (ENSCHIG00000010463)	NKX2-6 (ENSCHIG00000023290)	STC1 (ENSCHIG00000010708)	ENSCHIG00000012581	ADAM28 (ENSCHIG00000024308)	ADAMDEC1 (ENSCHIG00000015701)	ADAM7 (ENSCHIG00000015652)	NEFM (ENSCHIG00000019945)	NEFL (ENSCHIG00000011951)	DOCK5 (ENSCHIG00000001085)	GNRH1 (ENSCHIG00000016406)	KCTD9 (ENSCHIG00000015791)	CDCA2 (ENSCHIG00000018580)	EBF2 (ENSCHIG00000023729)
Goat	MODERN SPECIES	4	PHF20 (ENSCHIG00000016721)	SCAND1 (ENSCHIG00000009506)	CNBD2 (ENSCHIG00000023408)	EPB41L1 (ENSCHIG00000025392)	AAR2 (ENSCHIG00000021208)	DLGAP4 (ENSCHIG00000022363)	MYL9 (ENSCHIG00000021010)	TGIF2 (ENSCHIG00000015412)	ENSCHIG00000027200	SLA2 (ENSCHIG00000010911)	NDRG3 (ENSCHIG00000018760)	DSN1 (ENSCHIG00000025762)	SOGA1 (ENSCHIG00000025181)	TLDC2 (ENSCHIG00000026358)	SAMHD1 (ENSCHIG00000027049)	ENSCHIG00000011028 #22	ENSCHIG00000019085	RBL1 (ENSCHIG00000010137)	MROH8 (ENSCHIG00000012312)	RPN2 (ENSCHIG00000000531)	GHRH (ENSCHIG00000011021)	MANBAL (ENSCHIG00000024259)	SRC (ENSCHIG00000005804)	BLCAP (ENSCHIG00000013030)	NNAT (ENSCHIG00000026109)	CTNNBL1 (ENSCHIG00000022602)	VSTM2L (ENSCHIG00000020906)	TTI1 (ENSCHIG00000018124)	RPRD1B (ENSCHIG00000023548)	TGM2 (ENSCHIG00000025215)	KIAA1755 (ENSCHIG00000024385)
Goat	MODERN SPECIES	22	ENSCHIG00000011084	EPS15 (ENSCHIG00000014467)	TTC39A (ENSCHIG00000004432)	RNF11 (ENSCHIG00000015466)	C1orf185 (ENSCHIG00000024707)	CDKN2C (ENSCHIG00000018497)	FAF1 (ENSCHIG00000023469)	DMRTA2 (ENSCHIG00000014219)	ELAVL4 (ENSCHIG00000002038)	BEND5 (ENSCHIG00000021731)	ENSCHIG00000002488	SPATA6 (ENSCHIG00000022098)	SLC5A9 (ENSCHIG00000008499)	ENSCHIG00000016345	TRABD2B (ENSCHIG00000016346)	ENSCHIG00000008212 #22	FOXD2 (ENSCHIG00000000964)	FOXE3 (ENSCHIG00000005171)	CMPK1 (ENSCHIG00000009857)	STIL (ENSCHIG00000018306)	TAL1 (ENSCHIG00000023704)	PDZK1IP1 (ENSCHIG00000010100)	CYP4X1 (ENSCHIG00000017002)	CYP4A42 (ENSCHIG00000025289)	ENSCHIG00000022081	ENSCHIG00000002358	ENSCHIG00000017193	CYP4A41 (ENSCHIG00000013010)	ENSCHIG00000008252	ENSCHIG00000006577	CYP4B1 (ENSCHIG00000010220)
Rambouillet Sheep	MODERN SPECIES	22	ENSOARG00020024542	APBB2 (ENSOARG00020024292) #10	NSUN7 (ENSOARG00020024204) #11	RBM47 (ENSOARG00020024160) #12	CHRNA9 (ENSOARG00020024145) #13	RHOH (ENSOARG00020024134) #14	ENSOARG00020024115 #15	ENSOARG00020024105	ENSOARG00020024089	ENSOARG00020024081	PDS5A (ENSOARG00020024026) #17	UBE2K (ENSOARG00020023978) #18	SMIM14 (ENSOARG00020023943) #19	UGDH (ENSOARG00020023884) #20	LIAS (ENSOARG00020023685) #21	RPL9 (ENSOARG00020023606) #22	KLB (ENSOARG00020023555) #23	RFC1 (ENSOARG00020023327) #24	WDR19 (ENSOARG00020023069) #26	KLHL5 (ENSOARG00020022757) #27	TMEM156 (ENSOARG00020022716) #28	FAM114A1 (ENSOARG00020022672) #29	KLF3 (ENSOARG00020022589) #33	TBC1D1 (ENSOARG00020022096) #34	PGM2 (ENSOARG00020022008) #35	RELL1 (ENSOARG00020021988) #37	C6H4orf19 (ENSOARG00020021966)	NWD2 (ENSOARG00020021937)	DTHD1 (ENSOARG00020021575)	ARAP2 (ENSOARG00020020778)	ENSOARG00020020648
Bovinae	ANCESTRAL SPECIES	15	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000153446.a.a.f	ENSGT00940000159709 #37
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES	15	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a.c #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000153446.a.a.f	ENSGT00940000159709 #37
Bos_b	ANCESTRAL SPECIES	14	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT01100000263480.a.b.b.a.b.b.a.a.a.b.a.a	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a.c #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.a #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000153446.a.a.f	ENSGT00940000159709 #37
Cow	DUPLICATION
Cow	MODERN SPECIES	25	ENSBTAG00000051208	LIMCH1 (ENSBTAG00000010677) #7	UCHL1 (ENSBTAG00000005078) #9	APBB2 (ENSBTAG00000027569) #10	NSUN7 (ENSBTAG00000001572) #11	RBM47 (ENSBTAG00000002356) #12	CHRNA9 (ENSBTAG00000015252) #13	RHOH (ENSBTAG00000013451) #14	ENSBTAG00000049669	N4BP2 (ENSBTAG00000000175) #15	PDS5A (ENSBTAG00000017809) #17	UBE2K (ENSBTAG00000020175) #18	SMIM14 (ENSBTAG00000014522) #19	UGDH (ENSBTAG00000014521) #20	LIAS (ENSBTAG00000014520) #21	RPL9 (ENSBTAG00000014518) #22	KLB (ENSBTAG00000014517) #23	RFC1 (ENSBTAG00000014515) #24	WDR19 (ENSBTAG00000014512) #26	KLHL5 (ENSBTAG00000006044) #27	TMEM156 (ENSBTAG00000015649) #28	ENSBTAG00000055220 #29	FAM114A1 (ENSBTAG00000033160) #29	TLR6 (ENSBTAG00000014031) #30	TLR10 (ENSBTAG00000014042) #32	KLF3 (ENSBTAG00000017488) #33	TBC1D1 (ENSBTAG00000013699) #34	ENSBTAG00000052370	PGM2 (ENSBTAG00000005773) #35	ENSBTAG00000053088	RELL1 (ENSBTAG00000004329) #37
Cow	MODERN SPECIES	2	ADAMTSL2 (ENSBTAG00000007492)	MYMK (ENSBTAG00000013242)	SLC2A6 (ENSBTAG00000001824)	CACFD1 (ENSBTAG00000015097)	ENSBTAG00000051781	ADAMTS13 (ENSBTAG00000015093)	REXO4 (ENSBTAG00000019721)	STKLD1 (ENSBTAG00000004140)	SURF4 (ENSBTAG00000051352)	SURF2 (ENSBTAG00000000046)	SURF1 (ENSBTAG00000030384)	RPL7A (ENSBTAG00000011559)	MED22 (ENSBTAG00000011556)	SURF6 (ENSBTAG00000011554)	ABO (ENSBTAG00000012525)	ENSBTAG00000030281 #22	DIPK1B (ENSBTAG00000021928)	AGPAT2 (ENSBTAG00000025161)	EGFL7 (ENSBTAG00000030278)	ENSBTAG00000049379	NOTCH1 (ENSBTAG00000022799)	SEC16A (ENSBTAG00000023933)	INPP5E (ENSBTAG00000001354)	PMPCA (ENSBTAG00000001353)	ENTR1 (ENSBTAG00000001352)	SNAPC4 (ENSBTAG00000000054)	CARD9 (ENSBTAG00000006572)	DNLZ (ENSBTAG00000012880)	GPSM1 (ENSBTAG00000018799)	ENSBTAG00000023064	QSOX2 (ENSBTAG00000011129)
Hybrid Bos Indicus	MODERN SPECIES	25	PHOX2B (ENSBIXG00005012048)	LIMCH1 (ENSBIXG00005000345) #7	UCHL1 (ENSBIXG00005012562) #9	ENSBIXG00005012590	APBB2 (ENSBIXG00005012724) #10	NSUN7 (ENSBIXG00005012787) #11	RBM47 (ENSBIXG00005001444) #12	CHRNA9 (ENSBIXG00005012942) #13	ENSBIXG00005001461	N4BP2 (ENSBIXG00005012999) #15	PDS5A (ENSBIXG00005013229) #17	ENSBIXG00005013289 #18	SMIM14 (ENSBIXG00005013329) #19	UGDH (ENSBIXG00005007485) #20	LIAS (ENSBIXG00005006804) #21	ENSBIXG00005013495 #22	KLB (ENSBIXG00005001629) #23	RFC1 (ENSBIXG00005001653) #24	WDR19 (ENSBIXG00005013631) #26	ENSBIXG00005001670	KLHL5 (ENSBIXG00005001689) #27	TMEM156 (ENSBIXG00005013809) #28	FAM114A1 (ENSBIXG00005013840) #29	TLR6 (ENSBIXG00005013851) #30	TLR1 (ENSBIXG00005013874) #31	TLR10 (ENSBIXG00005013883) #32	KLF3 (ENSBIXG00005013914) #33	TBC1D1 (ENSBIXG00005006366) #34	ENSBIXG00005001823	PGM2 (ENSBIXG00005014080) #35	RELL1 (ENSBIXG00005014109) #37
Bos_a	ANCESTRAL SPECIES	21	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059 #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a.t.a.a.c #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949.c.b #34	ENSGT00940000157949.c.a #34	ENSGT01030000235076	ENSGT00940000156247 #35	ENSGT00940000153446.a.a.f
Domestic yak	MODERN SPECIES	25	ENSBGRG00000002669	APBB2 (ENSBGRG00000002693) #10	ENSBGRG00000002737	NSUN7 (ENSBGRG00000002761) #11	RBM47 (ENSBGRG00000002798) #12	CHRNA9 (ENSBGRG00000002828) #13	RHOH (ENSBGRG00000002839) #14	N4BP2 (ENSBGRG00000002859) #15	ENSBGRG00000002884	PDS5A (ENSBGRG00000002901) #17	UBE2K (ENSBGRG00000002976) #18	ENSBGRG00000003067	SMIM14 (ENSBGRG00000003070) #19	UGDH (ENSBGRG00000003085) #20	LIAS (ENSBGRG00000003188) #21	ENSBGRG00000003539 #22	KLB (ENSBGRG00000003576) #23	RFC1 (ENSBGRG00000003610) #24	WDR19 (ENSBGRG00000003750) #26	KLHL5 (ENSBGRG00000004023) #27	TMEM156 (ENSBGRG00000004170) #28	FAM114A1 (ENSBGRG00000004223) #29	TLR6 (ENSBGRG00000004251) #30	TLR1 (ENSBGRG00000004271) #31	TLR10 (ENSBGRG00000004282) #32	KLF3 (ENSBGRG00000004311) #33	ENSBGRG00000004364 #34	ENSBGRG00000004393 #34	ENSBGRG00000004450	PGM2 (ENSBGRG00000004476) #35	ENSBGRG00000004557
Bos	ANCESTRAL SPECIES	7	ENSGT00940000153680.a	ENSGT01100000263480.a.a.a.b.b.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00940000159865	ENSGT00390000003197.i.a.u.a	ENSGT00390000001143	ENSGT00950000183090.C	ENSGT00940000159265	ENSGT00940000159409	ENSGT00390000015224.c.a.a.a.t.a.a.d #22	ENSGT00940000156929	ENSGT00510000046981	ENSGT00390000004757	ENSGT00940000156389.a	ENSGT00940000158154	ENSGT00940000161593	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00940000162953	ENSGT00940000161771	ENSGT00940000163072	ENSGT00940000159619.a	ENSGT00550000074851.n	ENSGT00940000159448
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000153680.a	ENSGT01100000263480.a.a.a.b.b.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00940000159865	ENSGT00390000003197.i.a.u.a	ENSGT00390000001143	ENSGT00950000183090.C	ENSGT00940000159265	ENSGT00940000159409	ENSGT00390000015224.c.a.a.a.t.a.a.d #22	ENSGT00940000156929	ENSGT00510000046981	ENSGT01100000263481.n.a.b.a.a.a.b.b.b.a.b.a	ENSGT00390000004757	ENSGT00940000156389.a	ENSGT00940000158154	ENSGT00940000161593	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00940000162953	ENSGT00940000161771	ENSGT00940000163072	ENSGT00940000159619.a	ENSGT00550000074851.n
Cow	MODERN SPECIES		SMCO1 (ENSBTAG00000013319)	WDR53 (ENSBTAG00000014660)	FBXO45 (ENSBTAG00000006388)	NRROS (ENSBTAG00000009614)	CEP19 (ENSBTAG00000013192)	ENSBTAG00000049165	PIGX (ENSBTAG00000048195)	PAK2 (ENSBTAG00000047856)	SENP5 (ENSBTAG00000032674)	NCBP2 (ENSBTAG00000008873)	NCBP2AS2 (ENSBTAG00000048390)	PIGZ (ENSBTAG00000011659)	MELTF (ENSBTAG00000002998)	DLG1 (ENSBTAG00000020378)	ENSBTAG00000048826	ENSBTAG00000048225 #22	BDH1 (ENSBTAG00000000448)	APOD (ENSBTAG00000023600)	ENSBTAG00000050331	PPP1R2 (ENSBTAG00000006724)	ACAP2 (ENSBTAG00000003378)	ENSBTAG00000054986	XXYLT1 (ENSBTAG00000014564)	FAM43A (ENSBTAG00000008462)	LSG1 (ENSBTAG00000008461)	TMEM44 (ENSBTAG00000002394)	ATP13A3 (ENSBTAG00000013204)	GP5 (ENSBTAG00000013203)	LRRC15 (ENSBTAG00000038600)	CPN2 (ENSBTAG00000032656)	HES1 (ENSBTAG00000000569)
Bos_a	ANCESTRAL SPECIES	5	ENSGT00390000018687	ENSGT00940000153680.a	ENSGT01100000263480.a.a.a.b.b.a	ENSGT00390000010564	ENSGT00390000011073	ENSGT01030000234629.D	ENSGT00940000157975	ENSGT00390000016356	ENSGT00390000017679	ENSGT00950000182988.a.a	ENSGT00940000159865	ENSGT00390000003197.i.a.u.a	ENSGT00950000183090.C	ENSGT00940000159265	ENSGT00940000159409	ENSGT00390000015224.c.a.a.a.t.a.a.d #22	ENSGT00940000156929	ENSGT00510000046981	ENSGT00390000004757	ENSGT00940000156389.a	ENSGT00940000158154	ENSGT00940000161593	ENSGT00940000156442	ENSGT00390000018718	ENSGT00940000155941.A	ENSGT00940000162953	ENSGT00940000161771	ENSGT00940000163072	ENSGT00940000159619.a	ENSGT00550000074851.n	ENSGT00940000159448
Domestic yak	MODERN SPECIES		RNF168 (ENSBGRG00000018769)	ENSBGRG00000018793	SMCO1 (ENSBGRG00000018804)	WDR53 (ENSBGRG00000018865)	FBXO45 (ENSBGRG00000018893)	NRROS (ENSBGRG00000018922)	CEP19 (ENSBGRG00000018942)	PIGX (ENSBGRG00000018965)	ENSBGRG00000019060	PAK2 (ENSBGRG00000019104)	SENP5 (ENSBGRG00000019330)	NCBP2 (ENSBGRG00000019513)	ENSBGRG00000019688	MELTF (ENSBGRG00000019730)	DLG1 (ENSBGRG00000020056)	ENSBGRG00000022832 #22	BDH1 (ENSBGRG00000022869)	APOD (ENSBGRG00000022918)	ENSBGRG00000022948	ACAP2 (ENSBGRG00000023053)	XXYLT1 (ENSBGRG00000023443)	FAM43A (ENSBGRG00000023485)	LSG1 (ENSBGRG00000023529)	TMEM44 (ENSBGRG00000023581)	ATP13A3 (ENSBGRG00000023744)	GP5 (ENSBGRG00000024310)	LRRC15 (ENSBGRG00000024363)	CPN2 (ENSBGRG00000024371)	HES1 (ENSBGRG00000024386)	ENSBGRG00000024652	ATP13A4 (ENSBGRG00000000183)
Wild yak	MODERN SPECIES	941	RNF168 (ENSBMUG00000021322)	SMCO1 (ENSBMUG00000021331)	WDR53 (ENSBMUG00000021347)	FBXO45 (ENSBMUG00000021374)	NRROS (ENSBMUG00000021382)	ENSBMUG00000021393	CEP19 (ENSBMUG00000021416)	PIGX (ENSBMUG00000021454)	PAK2 (ENSBMUG00000021499)	ENSBMUG00000021508	SENP5 (ENSBMUG00000021526)	NCBP2 (ENSBMUG00000021541)	ENSBMUG00000021551	MELTF (ENSBMUG00000021570)	DLG1 (ENSBMUG00000021750)	ENSBMUG00000021827 #22	BDH1 (ENSBMUG00000021843)	APOD (ENSBMUG00000021862)	ENSBMUG00000021874	ACAP2 (ENSBMUG00000021896)
American bison	MODERN SPECIES	2904											PDS5A (ENSBBBG00000002776) #17	UBE2K (ENSBBBG00000015119) #18	SMIM14 (ENSBBBG00000015086) #19	UGDH (ENSBBBG00000015077) #20	LIAS (ENSBBBG00000015037) #21	ENSBBBG00000000823 #22	KLB (ENSBBBG00000000872) #23	ENSBBBG00000000884 #24	ENSBBBG00000000893 #24	WDR19 (ENSBBBG00000000906) #26	KLHL5 (ENSBBBG00000000987) #27	TMEM156 (ENSBBBG00000001075) #28	FAM114A1 (ENSBBBG00000001087) #29	TLR6 (ENSBBBG00000001113) #30	TLR1 (ENSBBBG00000001122) #31	TLR10 (ENSBBBG00000001131) #32	KLF3 (ENSBBBG00000001145) #33
Bovidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b #22
Bovinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b #22
Bos	DUPLICATION
Bos	DUPLICATION
Bos	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b.a.a #22
Bos_a	ANCESTRAL SPECIES	19	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a	ENSGT00390000008591	ENSGT01030000235010.e.a	ENSGT00940000159242	ENSGT00920000150804	ENSGT00730000111075.b	ENSGT00940000161429	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000156017	ENSGT00730000111570	ENSGT00950000183107.a.b.b	ENSGT00940000162488	ENSGT00940000161206	ENSGT00390000015224.c.a.a.a.t.a.b.a.a #22	ENSGT01030000234518.D	ENSGT00390000007560.k.b	ENSGT01100000263536.A.a.a.b	ENSGT01040000240444.A.a.a.a.b	ENSGT00390000009948.c.l	ENSGT01100000263536.B.c.b	ENSGT00550000074618.a.b.ab.a.a.a.a	ENSGT00940000163592	ENSGT00940000161697	ENSGT00390000008820.e.b.kb	ENSGT00940000159568	ENSGT00390000012178.g.b.b.a.b.a	ENSGT00390000012030.b.a	ENSGT00940000154426.b.b.h	ENSGT00940000155902
Domestic yak	MODERN SPECIES	69	ENSBGRG00000025313	HDX (ENSBGRG00000025367)	ENSBGRG00000025377	RPS6KA6 (ENSBGRG00000012307)	CYLC1 (ENSBGRG00000013173)	POU3F4 (ENSBGRG00000013340)	ENSBGRG00000013359	ENSBGRG00000013400	ENSBGRG00000013446	SH3BGRL (ENSBGRG00000013469)	ENSBGRG00000013533	BRWD3 (ENSBGRG00000013595)	TENT5D (ENSBGRG00000014080)	TBX22 (ENSBGRG00000014109)	ENSBGRG00000014224	ENSBGRG00000014249 #22	GPR174 (ENSBGRG00000014278)	P2RY10 (ENSBGRG00000014291)	LPAR4 (ENSBGRG00000014316)	ENSBGRG00000014334	CYSLTR1 (ENSBGRG00000014355)	ENSBGRG00000014446	TAF9B (ENSBGRG00000014722)	PGK1 (ENSBGRG00000014778)	ATP7A (ENSBGRG00000015150)	ENSBGRG00000015336	MAGT1 (ENSBGRG00000015408)	ENSBGRG00000015557	ATRX (ENSBGRG00000016038)	FGF16 (ENSBGRG00000022814)	PBDC1 (ENSBGRG00000022890)
Bos_b	ANCESTRAL SPECIES	31	ENSGT00950000183121.b.b.b.a	ENSGT00530000063666.a	ENSGT00390000008591	ENSGT01030000235010.e.a	ENSGT00940000159242	ENSGT00920000150804	ENSGT00730000111075.b	ENSGT00940000161429	ENSGT00940000164351	ENSGT00390000011425.A	ENSGT00940000156017	ENSGT00730000111570	ENSGT00950000183107.a.b.b	ENSGT00940000162488	ENSGT00940000161206	ENSGT00390000015224.c.a.a.a.t.a.b.a.a #22	ENSGT01030000234518.D	ENSGT00390000007560.k.b
Cow	MODERN SPECIES	177	ENSBTAG00000055024	RPS6KA6 (ENSBTAG00000002015)	ENSBTAG00000048589	CYLC1 (ENSBTAG00000047417)	POU3F4 (ENSBTAG00000015712)	ENSBTAG00000039066	ENSBTAG00000051658	ENSBTAG00000048206	SH3BGRL (ENSBTAG00000010587)	ENSBTAG00000049971	HMGN5 (ENSBTAG00000001877)	ENSBTAG00000051240	BRWD3 (ENSBTAG00000016230)	TENT5D (ENSBTAG00000045653)	TBX22 (ENSBTAG00000048060)	ENSBTAG00000045678 #22	GPR174 (ENSBTAG00000021437)	ENSBTAG00000054002	ENSBTAG00000050883	P2RY10 (ENSBTAG00000008555)	LPAR4 (ENSBTAG00000003299)	ENSBTAG00000035882	CYSLTR1 (ENSBTAG00000024675)	ENSBTAG00000051877	ENSBTAG00000026025	TAF9B (ENSBTAG00000000895)	PGK1 (ENSBTAG00000000894)	ATP7A (ENSBTAG00000010018)	COX7B (ENSBTAG00000047768)	MAGT1 (ENSBTAG00000045931)	ENSBTAG00000053487
Hybrid Bos Indicus	MODERN SPECIES	26	SPRY4 (ENSBIXG00005016759)	NDFIP1 (ENSBIXG00005016690)	ENSBIXG00005016650	GNPDA1 (ENSBIXG00005016638)	RNF14 (ENSBIXG00005006352)	PCDH12 (ENSBIXG00005016404)	DELE1 (ENSBIXG00005016389)	PCDH1 (ENSBIXG00005016354)	ARAP3 (ENSBIXG00005007324)	FCHSD1 (ENSBIXG00005016185)	RELL2 (ENSBIXG00005016160)	HDAC3 (ENSBIXG00005016120)	DIAPH1 (ENSBIXG00005016069)	ENSBIXG00005016084	ENSBIXG00005002548	ENSBIXG00005015875 #22	ENSBIXG00005015866	TAF7 (ENSBIXG00005002491)	SLC25A2 (ENSBIXG00005015856)	PCDHB15 (ENSBIXG00005000157)	PCDHB14 (ENSBIXG00005015782)	ENSBIXG00005015769	ENSBIXG00005002464	PCDHB16 (ENSBIXG00005002460)	ENSBIXG00005015742	PCDHB7 (ENSBIXG00005015732)	ENSBIXG00005015723	PCDHB6 (ENSBIXG00005002446)	PCDHB4 (ENSBIXG00005015653)	ENSBIXG00005015645	ENSBIXG00005015637
Bos	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b.a.b #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b.a.b #22
Cow	MODERN SPECIES	4	APCDD1L (ENSBTAG00000020397)	VAPB (ENSBTAG00000017424)	RAB22A (ENSBTAG00000018053)	ENSBTAG00000052305	C13H20orf85 (ENSBTAG00000016926)	ENSBTAG00000054668	PMEPA1 (ENSBTAG00000054628)	ZBP1 (ENSBTAG00000012406)	PCK1 (ENSBTAG00000001936)	CTCFL (ENSBTAG00000013079)	RBM38 (ENSBTAG00000008105)	RAE1 (ENSBTAG00000010934)	SPO11 (ENSBTAG00000044210)	BMP7 (ENSBTAG00000015362)	TFAP2C (ENSBTAG00000002065)	ENSBTAG00000024608 #22	FAM209A (ENSBTAG00000031462)	RTF2 (ENSBTAG00000027390)	GCNT7 (ENSBTAG00000006243)	CASS4 (ENSBTAG00000014555)	CSTF1 (ENSBTAG00000006639)	AURKA (ENSBTAG00000013009)	FAM210B (ENSBTAG00000013007)	MC3R (ENSBTAG00000004712)	SIRPD (ENSBTAG00000033397)	SIRPB2 (ENSBTAG00000006539)	NSFL1C (ENSBTAG00000006533)	FKBP1A (ENSBTAG00000008303)	ENSBTAG00000052136	SDCBP2 (ENSBTAG00000021321)	SNPH (ENSBTAG00000048366)
Bos	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b.b #22
Bos_a	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b.b #22
Wild yak	MODERN SPECIES	782																ENSBMUG00000008213 #22	ENSBMUG00000008223	EPB42 (ENSBMUG00000008283)	CCNDBP1 (ENSBMUG00000008340)	TMEM62 (ENSBMUG00000008353)
Caprinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.a.b #22
Rambouillet Sheep	MODERN SPECIES	25	ASAP1 (ENSOARG00020009370)	CYRIB (ENSOARG00020009735)	ENSOARG00020009780	ENSOARG00020009811	MYC (ENSOARG00020009900)	ENSOARG00020010012	ENSOARG00020010049	ENSOARG00020010136	LRATD2 (ENSOARG00020010199)	ENSOARG00020010223	TRIB1 (ENSOARG00020010295)	NSMCE2 (ENSOARG00020010360)	WASHC5 (ENSOARG00020010489)	SQLE (ENSOARG00020011372)	ZNF572 (ENSOARG00020011524)	ENSOARG00020011568 #22	MTSS1 (ENSOARG00020011599)	NDUFB9 (ENSOARG00020012046)	TATDN1 (ENSOARG00020012205)	RNF139 (ENSOARG00020012478)	TRMT12 (ENSOARG00020012514)	TMEM65 (ENSOARG00020012542)	FER1L6 (ENSOARG00020012678)	FAM91A1 (ENSOARG00020013597)	ANXA13 (ENSOARG00020014445)	KLHL38 (ENSOARG00020014756)	FBXO32 (ENSOARG00020014812)	NTAQ1 (ENSOARG00020015073)	ATAD2 (ENSOARG00020015273)	ZHX1 (ENSOARG00020015701)	C9H8orf76 (ENSOARG00020015718)
Bovidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.b #22
Caprinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.b #22
Goat	MODERN SPECIES	16	NDC80 (ENSCHIG00000000360)	METTL4 (ENSCHIG00000000254)	ADCYAP1 (ENSCHIG00000000212)	ENSCHIG00000000177	YES1 (ENSCHIG00000000143)	ENOSF1 (ENSCHIG00000000109)	TYMS (ENSCHIG00000000075)	CLUL1 (ENSCHIG00000012461)	CETN1 (ENSCHIG00000006822)	COLEC12 (ENSCHIG00000019421)	THOC1 (ENSCHIG00000015399)	USP14 (ENSCHIG00000006538)	ENSCHIG00000001073	ROCK1 (ENSCHIG00000016132)	ENSCHIG00000008866	ENSCHIG00000009159 #22	GREB1L (ENSCHIG00000025994)	ESCO1 (ENSCHIG00000016783)	SNRPD1 (ENSCHIG00000005557)	ABHD3 (ENSCHIG00000024480)	ENSCHIG00000014890	MIB1 (ENSCHIG00000002236)	GATA6 (ENSCHIG00000018847)	RBBP8 (ENSCHIG00000013081)	CABLES1 (ENSCHIG00000024112)	TMEM241 (ENSCHIG00000011954)	RIOK3 (ENSCHIG00000009312)	ENSCHIG00000024653	ENSCHIG00000021287	ANKRD29 (ENSCHIG00000018673)	ENSCHIG00000015951
Bovinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.b #22
Bos	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.b #22
Bos_b	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.t.b #22
Cow	MODERN SPECIES	3	ENSBTAG00000051519	TGDS (ENSBTAG00000005309)	GPR180 (ENSBTAG00000005310)	SOX21 (ENSBTAG00000022484)	ENSBTAG00000032603	ENSBTAG00000047383	ENSBTAG00000046041	ENSBTAG00000049836	ENSBTAG00000047181	ENSBTAG00000023309	CLDN10 (ENSBTAG00000003568)	DZIP1 (ENSBTAG00000003569)	DNAJC3 (ENSBTAG00000012065)	UGGT2 (ENSBTAG00000004401)	HS6ST3 (ENSBTAG00000039065)	ENSBTAG00000045566 #22	OXGR1 (ENSBTAG00000021345)	MBNL2 (ENSBTAG00000018313)	RAP2A (ENSBTAG00000020412)	IPO5 (ENSBTAG00000039374)	FARP1 (ENSBTAG00000000146)	STK24 (ENSBTAG00000032234)	SLC15A1 (ENSBTAG00000004440)	DOCK9 (ENSBTAG00000010395)	UBAC2 (ENSBTAG00000005682)	GPR18 (ENSBTAG00000002240)	GPR183 (ENSBTAG00000032084)	ENSBTAG00000038268	TM9SF2 (ENSBTAG00000001589)	CLYBL (ENSBTAG00000004165)	ENSBTAG00000051991
Bovidae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.u #22
Bovinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.u #22
American bison	MODERN SPECIES	243																ENSBBBG00000008213 #22
Caprinae	ANCESTRAL SPECIES																	ENSGT00390000015224.c.a.a.a.u #22
Rambouillet Sheep	MODERN SPECIES		RNF220 (ENSOARG00020002839)	TMEM53 (ENSOARG00020002864)	ARMH1 (ENSOARG00020002881)	RPS8 (ENSOARG00020002902)	KIF2C (ENSOARG00020002926)	BEST4 (ENSOARG00020003023)	PLK3 (ENSOARG00020003053)	DYNLT4 (ENSOARG00020003125)	BTBD19 (ENSOARG00020003142)	PTCH2 (ENSOARG00020003214)	EIF2B3 (ENSOARG00020003516)	ENSOARG00020003567	UROD (ENSOARG00020003627)	HECTD3 (ENSOARG00020003787)	ZSWIM5 (ENSOARG00020003848)	ENSOARG00020000037 #22	HPDL (ENSOARG00020000043)	MUTYH (ENSOARG00020000051)	TOE1 (ENSOARG00020000052)	TESK2 (ENSOARG00020000085)	ENSOARG00020000128	MMACHC (ENSOARG00020000138)	PRDX1 (ENSOARG00020000156)	AKR1A1 (ENSOARG00020000189)	ENSOARG00020000265	CCDC17 (ENSOARG00020000364)	GPBP1L1 (ENSOARG00020000433)	TMEM69 (ENSOARG00020000462)	IPP (ENSOARG00020000478)	ENSOARG00020000500	MAST2 (ENSOARG00020000575)
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	1268	PHOX2B (ENSMMSG00000023639)	LIMCH1 (ENSMMSG00000023686) #7	UCHL1 (ENSMMSG00000023900) #9	APBB2 (ENSMMSG00000023923) #10	RBM47 (ENSMMSG00000023957) #12	CHRNA9 (ENSMMSG00000023965) #13	RHOH (ENSMMSG00000023968) #14	N4BP2 (ENSMMSG00000023971) #15	PDS5A (ENSMMSG00000023983) #17	UBE2K (ENSMMSG00000023998) #18	ENSMMSG00000024015	ENSMMSG00000024027 #19	ENSMMSG00000024033	UGDH (ENSMMSG00000024036) #20	LIAS (ENSMMSG00000024047) #21	RPL9 (ENSMMSG00000024067) #22	KLB (ENSMMSG00000024074) #23	ENSMMSG00000024077 #24	WDR19 (ENSMMSG00000024087) #26	KLHL5 (ENSMMSG00000024102) #27	TMEM156 (ENSMMSG00000024118) #28	FAM114A1 (ENSMMSG00000024129) #29	ENSMMSG00000024141 #30	ENSMMSG00000024143 #31	TLR10 (ENSMMSG00000024146) #32	KLF3 (ENSMMSG00000024147) #33	TBC1D1 (ENSMMSG00000024155) #34	ENSMMSG00000024181	PGM2 (ENSMMSG00000024185) #35	RELL1 (ENSMMSG00000024196) #37	ENSMMSG00000024203
Siberian musk deer	MODERN SPECIES	21	ENSMMSG00000002489	ENSMMSG00000002507	ENSMMSG00000002526	NFKBIZ (ENSMMSG00000002549)	NXPE3 (ENSMMSG00000002592)	ENSMMSG00000002610	CEP97 (ENSMMSG00000002625)	RPL24 (ENSMMSG00000002654)	ZBTB11 (ENSMMSG00000002682)	PCNP (ENSMMSG00000002707)	TRMT10C (ENSMMSG00000002724)	ENSMMSG00000002729	SENP7 (ENSMMSG00000002791)	IMPG2 (ENSMMSG00000003217)	ENSMMSG00000003246	ENSMMSG00000003268 #22	ABI3BP (ENSMMSG00000003297)	TFG (ENSMMSG00000003469)	ADGRG7 (ENSMMSG00000003498)	TMEM45A (ENSMMSG00000003567)	LNP1 (ENSMMSG00000003607)	TOMM70 (ENSMMSG00000003628)	NIT2 (ENSMMSG00000003660)	TBC1D23 (ENSMMSG00000003705)	ENSMMSG00000003842	ENSMMSG00000003855	CMSS1 (ENSMMSG00000003865)	FILIP1L (ENSMMSG00000003877)	COL8A1 (ENSMMSG00000003890)	DCBLD2 (ENSMMSG00000003896)	ST3GAL6 (ENSMMSG00000003910)
Cetacea	ANCESTRAL SPECIES	12	ENSGT00940000159958	ENSGT00990000212839	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059.k.a #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000159709 #37	ENSGT00390000013778
Blue whale	MODERN SPECIES	16	ENSBMSG00010004449	LIMCH1 (ENSBMSG00010004613) #7	UCHL1 (ENSBMSG00010005160) #9	APBB2 (ENSBMSG00010005187) #10	NSUN7 (ENSBMSG00010005244) #11	RBM47 (ENSBMSG00010005312) #12	ENSBMSG00010005369	CHRNA9 (ENSBMSG00010005383) #13	N4BP2 (ENSBMSG00010005414) #15	ENSBMSG00010005428	PDS5A (ENSBMSG00010005463) #17	ENSBMSG00010005790 #18	SMIM14 (ENSBMSG00010005888) #19	UGDH (ENSBMSG00010005911) #20	LIAS (ENSBMSG00010005961) #21	RPL9 (ENSBMSG00010006052) #22	KLB (ENSBMSG00010006078) #23	ENSBMSG00010006112	RFC1 (ENSBMSG00010006129) #24	WDR19 (ENSBMSG00010006185) #26	KLHL5 (ENSBMSG00010006252) #27	TMEM156 (ENSBMSG00010006449) #28	FAM114A1 (ENSBMSG00010000149) #29	TLR1 (ENSBMSG00010000182) #31	TLR10 (ENSBMSG00010000209) #32	KLF3 (ENSBMSG00010000250) #33	TBC1D1 (ENSBMSG00010000294) #34	PGM2 (ENSBMSG00010000369) #35	RELL1 (ENSBMSG00010000412) #37	C4orf19 (ENSBMSG00010000470)	NWD2 (ENSBMSG00010000492)
Odontoceti	ANCESTRAL SPECIES	11	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000160888.h	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059.k.a #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00940000154863.d	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Sperm whale	MODERN SPECIES	18	LIMCH1 (ENSPCTG00005012462) #7	ENSPCTG00005014187	ENSPCTG00005014242 #9	APBB2 (ENSPCTG00005014603) #10	NSUN7 (ENSPCTG00005014806) #11	RBM47 (ENSPCTG00005014921) #12	CHRNA9 (ENSPCTG00005015100) #13	RHOH (ENSPCTG00005015193) #14	N4BP2 (ENSPCTG00005015217) #15	PDS5A (ENSPCTG00005015289) #17	UBE2K (ENSPCTG00005015617) #18	ENSPCTG00005015630 #18	ENSPCTG00005015666 #19	UGDH (ENSPCTG00005015727) #20	LIAS (ENSPCTG00005015829) #21	RPL9 (ENSPCTG00005016711) #22	KLB (ENSPCTG00005016744) #23	ENSPCTG00005016845	RFC1 (ENSPCTG00005016905) #24	WDR19 (ENSPCTG00005017116) #26	KLHL5 (ENSPCTG00005017206) #27	TMEM156 (ENSPCTG00005017296) #28	FAM114A1 (ENSPCTG00005017381) #29	TLR6 (ENSPCTG00005017439) #30	TLR1 (ENSPCTG00005017458) #31	TLR10 (ENSPCTG00005017472) #32	KLF3 (ENSPCTG00005017490) #33	TBC1D1 (ENSPCTG00005017560) #34	PGM2 (ENSPCTG00005017784) #35	RELL1 (ENSPCTG00005017831) #37	C7H4orf19 (ENSPCTG00005017891)
Odontoceti_a	ANCESTRAL SPECIES	23	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000160888.h	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059.k.a #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00940000154863.c.a	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Odontoceti_b	ANCESTRAL SPECIES	11	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000160888.h	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059.k.a #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00940000154863.c.a	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Monodontidae	ANCESTRAL SPECIES	9	ENSGT00390000011368	ENSGT00940000159958	ENSGT00950000183159.a #7	ENSGT00940000157306 #9	ENSGT00390000000002.a.a.a #10	ENSGT00940000157352 #11	ENSGT00940000156979 #12	ENSGT00940000156077 #13	ENSGT00940000160078 #14	ENSGT00940000160604 #15	ENSGT00940000155155 #17	ENSGT00670000098059.k.a #18	ENSGT00390000018294 #19	ENSGT00390000015355 #20	ENSGT00390000006234 #21	ENSGT00390000015224.c.a.a.a #22	ENSGT00940000157489 #23	ENSGT00940000154863.c.a	ENSGT00730000111066 #24	ENSGT00590000083165 #26	ENSGT00940000155358 #27	ENSGT00390000017929 #28	ENSGT00390000010054.b #29	ENSGT00940000162201 #30	ENSGT00940000162884 #31	ENSGT00940000163662 #32	ENSGT00940000157456 #33	ENSGT00940000157949 #34	ENSGT00960000191194	ENSGT00940000156247 #35	ENSGT00940000159709 #37
Beluga whale	DUPLICATION
Beluga whale	MODERN SPECIES	77	TMEM33 (ENSDLEG00000013216)	PHOX2B (ENSDLEG00000013234)	LIMCH1 (ENSDLEG00000013278) #7	UCHL1 (ENSDLEG00000013507) #9	APBB2 (ENSDLEG00000013538) #10	NSUN7 (ENSDLEG00000013631) #11	RBM47 (ENSDLEG00000013655) #12	CHRNA9 (ENSDLEG00000013664) #13	RHOH (ENSDLEG00000013696) #14	N4BP2 (ENSDLEG00000013712) #15	PDS5A (ENSDLEG00000013862) #17	UBE2K (ENSDLEG00000014417) #18	ENSDLEG00000014625 #19	UGDH (ENSDLEG00000014640) #20	ENSDLEG00000014668 #21	RPL9 (ENSDLEG00000014680) #22	KLB (ENSDLEG00000014726) #23	ENSDLEG00000014754	RFC1 (ENSDLEG00000014773) #24	ENSDLEG00000014808	WDR19 (ENSDLEG00000014815) #26	KLHL5 (ENSDLEG00000014868) #27	TMEM156 (ENSDLEG00000014905) #28	FAM114A1 (ENSDLEG00000014925) #29	TLR1 (ENSDLEG00000014978) #31	TLR10 (ENSDLEG00000014982) #32	KLF3 (ENSDLEG00000014988) #33	TBC1D1 (ENSDLEG00000015022) #34	ENSDLEG00000015205	PGM2 (ENSDLEG00000015218) #35	RELL1 (ENSDLEG00000015269) #37
Beluga whale	MODERN SPECIES	111	CFAP44 (ENSDLEG00000011931)	ENSDLEG00000012005	SPICE1 (ENSDLEG00000012023)	SIDT1 (ENSDLEG00000012056)	USF3 (ENSDLEG00000012137)	ENSDLEG00000012158	ATP6V1A (ENSDLEG00000012173)	GRAMD1C (ENSDLEG00000012274)	ZDHHC23 (ENSDLEG00000012890)	CCDC191 (ENSDLEG00000012911)	QTRT2 (ENSDLEG00000012943)	DRD3 (ENSDLEG00000012960)	TIGIT (ENSDLEG00000013002)	ENSDLEG00000013020	ZBTB20 (ENSDLEG00000013028)	ENSDLEG00000013048 #22	GAP43 (ENSDLEG00000013057)	ENSDLEG00000008129	LSAMP (ENSDLEG00000008170)	ENSDLEG00000008238	ENSDLEG00000008262	ENSDLEG00000008285	ENSDLEG00000008307	IGSF11 (ENSDLEG00000008349)	CUNH3orf30 (ENSDLEG00000008393)	UPK1B (ENSDLEG00000008444)	B4GALT4 (ENSDLEG00000008476)	ENSDLEG00000008505	ARHGAP31 (ENSDLEG00000008531)	TMEM39A (ENSDLEG00000008559)	POGLUT1 (ENSDLEG00000008589)
Narwhal	DUPLICATION
Narwhal	MODERN SPECIES	307	SLC30A9 (ENSMMNG00015006161)	TMEM33 (ENSMMNG00015006218)	PHOX2B (ENSMMNG00015006234)	LIMCH1 (ENSMMNG00015006482) #7	UCHL1 (ENSMMNG00015006970) #9	APBB2 (ENSMMNG00015007025) #10	NSUN7 (ENSMMNG00015007085) #11	RBM47 (ENSMMNG00015007138) #12	CHRNA9 (ENSMMNG00015007166) #13	N4BP2 (ENSMMNG00015007192) #15	PDS5A (ENSMMNG00015007249) #17	ENSMMNG00015007337 #18	ENSMMNG00015007401 #19	UGDH (ENSMMNG00015007426) #20	LIAS (ENSMMNG00015007517) #21	ENSMMNG00015007583 #22	KLB (ENSMMNG00015007619) #23	RFC1 (ENSMMNG00015007667) #24	WDR19 (ENSMMNG00015007719) #26	KLHL5 (ENSMMNG00015007769) #27	TMEM156 (ENSMMNG00015007786) #28	FAM114A1 (ENSMMNG00015007803) #29	TLR6 (ENSMMNG00015007837) #30	TLR1 (ENSMMNG00015007846) #31	TLR10 (ENSMMNG00015007855) #32	KLF3 (ENSMMNG00015007866) #33	TBC1D1 (ENSMMNG00015007932) #34	ENSMMNG00015008010	PGM2 (ENSMMNG00015008030) #35	RELL1 (ENSMMNG00015008056) #37	C4orf19 (ENSMMNG00015008076)
Narwhal	MODERN SPECIES	297	ENSMMNG00015009815	CFAP44 (ENSMMNG00015009893)	SIDT1 (ENSMMNG00015010149)	USF3 (ENSMMNG00015010173)	ENSMMNG00015010200	ATP6V1A (ENSMMNG00015010226)	GRAMD1C (ENSMMNG00015010268)	ZDHHC23 (ENSMMNG00015010322)	ENSMMNG00015010331	CCDC191 (ENSMMNG00015010364)	QTRT2 (ENSMMNG00015010546)	DRD3 (ENSMMNG00015010590)	TIGIT (ENSMMNG00015010619)	ENSMMNG00015010631	ZBTB20 (ENSMMNG00015010641)	ENSMMNG00015010661 #22	ENSMMNG00015010673	ENSMMNG00015010680	GAP43 (ENSMMNG00015010690)	ENSMMNG00015010697	LSAMP (ENSMMNG00015010725)	ENSMMNG00015010784	ENSMMNG00015010799	ENSMMNG00015010814	IGSF11 (ENSMMNG00015010829)	ENSMMNG00015010866	UPK1B (ENSMMNG00015010881)	B4GALT4 (ENSMMNG00015010913)	ENSMMNG00015010930	ARHGAP31 (ENSMMNG00015010940)	TMEM39A (ENSMMNG00015010956)
Vaquita	DUPLICATION
Vaquita	MODERN SPECIES	16	LIMCH1 (ENSPSNG00000002649) #7	ENSPSNG00000002450	UCHL1 (ENSPSNG00000002426) #9	APBB2 (ENSPSNG00000002282) #10	NSUN7 (ENSPSNG00000002168) #11	RBM47 (ENSPSNG00000002129) #12	CHRNA9 (ENSPSNG00000002090) #13	N4BP2 (ENSPSNG00000002055) #15	ENSPSNG00000002034	PDS5A (ENSPSNG00000001992) #17	ENSPSNG00000001872	UBE2K (ENSPSNG00000001843) #18	SMIM14 (ENSPSNG00000001796) #19	LIAS (ENSPSNG00000001715) #21	UGDH (ENSPSNG00000001570) #20	ENSPSNG00000001636 #22	KLB (ENSPSNG00000001433) #23	RFC1 (ENSPSNG00000001363) #24	WDR19 (ENSPSNG00000001273) #26	KLHL5 (ENSPSNG00000001155) #27	TMEM156 (ENSPSNG00000001096) #28	FAM114A1 (ENSPSNG00000001058) #29	TLR6 (ENSPSNG00000001037) #30	TLR1 (ENSPSNG00000001021) #31	TLR10 (ENSPSNG00000001007) #32	KLF3 (ENSPSNG00000000987) #33	TBC1D1 (ENSPSNG00000000856) #34	PGM2 (ENSPSNG00000000735) #35	RELL1 (ENSPSNG00000000700) #37	C4orf19 (ENSPSNG00000000685)	ENSPSNG00000000670
Vaquita	MODERN SPECIES	15	NEPRO (ENSPSNG00000017740)	BOC (ENSPSNG00000017660)	CFAP44 (ENSPSNG00000017138)	SPICE1 (ENSPSNG00000016946)	SIDT1 (ENSPSNG00000016388)	USF3 (ENSPSNG00000016257)	ENSPSNG00000016102	ATP6V1A (ENSPSNG00000016030)	GRAMD1C (ENSPSNG00000015794)	ZDHHC23 (ENSPSNG00000015729)	CCDC191 (ENSPSNG00000015671)	QTRT2 (ENSPSNG00000015605)	DRD3 (ENSPSNG00000015427)	TIGIT (ENSPSNG00000015281)	ENSPSNG00000015255	ENSPSNG00000015170 #22	ZBTB20 (ENSPSNG00000015096)	ENSPSNG00000015080	GAP43 (ENSPSNG00000014980)	LSAMP (ENSPSNG00000014694)	ENSPSNG00000014598	IGSF11 (ENSPSNG00000014352)	ENSPSNG00000014266	UPK1B (ENSPSNG00000013994)	ENSPSNG00000013885	ENSPSNG00000013843	ARHGAP31 (ENSPSNG00000013800)	TMEM39A (ENSPSNG00000013741)	POGLUT1 (ENSPSNG00000013656)	TIMMDC1 (ENSPSNG00000013534)	CD80 (ENSPSNG00000013417)