Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000156210	ENSGT00940000160677 #7	ENSGT01030000235089.b #8	ENSGT00940000161691 #9	ENSGT00940000154992.b #10	ENSGT01030000235508 #11	ENSGT00940000161553 #12	ENSGT00920000149157 #13	ENSGT00390000008686.c #14	ENSGT00390000005979.a #15	ENSGT00950000183072.a #16	ENSGT00530000063779.B #17	ENSGT01020000230359.A #18	ENSGT01020000230359.B #19	ENSGT00550000075117 #20	ENSGT00950000183099.u.a.e.e.b #22	ENSGT00950000183138.a.a.a #23	ENSGT00950000183138.a.a.b #25	ENSGT00940000160239 #26	ENSGT01090000263454	ENSGT01100000263542.A #27	ENSGT00390000007888.c.a #28	ENSGT00940000155471.d.h #30	ENSGT00940000156541 #31	ENSGT00940000155697.A #32	ENSGT00390000003571 #33	ENSGT00940000162293 #34	ENSGT00940000156402.B #36	ENSGT00940000159338	ENSGT00940000160407 #37	ENSGT00940000158548
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000156210	ENSGT00940000160677 #7	ENSGT01030000235089.b #8	ENSGT00940000161691 #9	ENSGT00940000154992.b #10	ENSGT01030000235508 #11	ENSGT00940000161553 #12	ENSGT00920000149157 #13	ENSGT00390000008686.c #14	ENSGT00390000005979.a #15	ENSGT00950000183072.a #16	ENSGT00530000063779.B #17	ENSGT01020000230359.A #18	ENSGT01020000230359.B #19	ENSGT00550000075117 #20	ENSGT00950000183099.u.a.e.e.b #22	ENSGT00950000183138.a.a.a #23	ENSGT00950000183138.a.a.b #25	ENSGT00940000160239 #26	ENSGT01090000263454	ENSGT01100000263542.A #27	ENSGT00390000007888.c.a #28	ENSGT00940000155471.d.h #30	ENSGT00940000156541 #31	ENSGT00940000155697.A #32	ENSGT00390000003571 #33	ENSGT00940000162293 #34	ENSGT00940000156402.B #36	ENSGT00940000159338	ENSGT00940000160407 #37	ENSGT00940000158548
Mus_C	ANCESTRAL SPECIES	23	ENSGT00940000156210	ENSGT00940000160677 #7	ENSGT01030000235089.b #8	ENSGT00940000161691 #9	ENSGT00940000154992.b #10	ENSGT01030000235508 #11	ENSGT00940000161553 #12	ENSGT00920000149157 #13	ENSGT00390000008686.c #14	ENSGT00390000005979.a #15	ENSGT00950000183072.a #16	ENSGT00530000063779.B #17	ENSGT01020000230359.A #18	ENSGT01020000230359.B #19	ENSGT00550000075117 #20	ENSGT00950000183099.u.a.e.e.b #22	ENSGT00950000183138.a.a.a #23	ENSGT00950000183138.a.a.b #25	ENSGT00940000160239 #26	ENSGT01100000263542.A #27	ENSGT00390000007888.c.a #28	ENSGT00940000155471.d.h #30	ENSGT00940000156541 #31	ENSGT00940000155697.A #32	ENSGT00390000003571 #33	ENSGT00940000162293 #34	ENSGT00940000156402.B #36	ENSGT00940000159338	ENSGT00940000160407 #37	ENSGT00940000158548	ENSGT00940000160089
Steppe mouse	MODERN SPECIES	3380	Exog (ENSMSIG00000003811) #7	ENSMSIG00000003784 #8	Scn5a (ENSMSIG00000003219) #9	Scn10a (ENSMSIG00000002952) #10	ENSMSIG00000002920 #11	Scn11a (ENSMSIG00000002716) #12	Wdr48 (ENSMSIG00000002592) #13	Gorasp1 (ENSMSIG00000002538) #14	Ttc21a (ENSMSIG00000002395) #15	Csrnp1 (ENSMSIG00000002344) #16	ENSMSIG00000002327 #17	Cx3cr1 (ENSMSIG00000002302) #18	Ccr8 (ENSMSIG00000002285) #19	Slc25a38 (ENSMSIG00000002254) #20	ENSMSIG00000002215 #21	Rpsa (ENSMSIG00000002112) #22	Mobp (ENSMSIG00000026540) #23	ENSMSIG00000026519 #24	Myrip (ENSMSIG00000026454) #25	ENSMSIG00000026436 #26	Entpd3 (ENSMSIG00000026423) #27	Rpl14 (ENSMSIG00000026415) #28	ENSMSIG00000026396 #29	Ctnnb1 (ENSMSIG00000026366) #30	Ulk4 (ENSMSIG00000023580) #31	Trak1 (ENSMSIG00000023343) #32	Cck (ENSMSIG00000023310) #33	Lyzl4 (ENSMSIG00000023296) #34	ENSMSIG00000023284 #35	Vipr1 (ENSMSIG00000023239) #36	Ss18l2 (ENSMSIG00000023200) #37
spretus	MODERN SPECIES	18	MGP_SPRETEiJ_G0033947	Xylb (MGP_SPRETEiJ_G0033948)	Acvr2b (MGP_SPRETEiJ_G0033949)	Exog (MGP_SPRETEiJ_G0033950) #7	Scn5a (MGP_SPRETEiJ_G0033951) #9	Scn10a (MGP_SPRETEiJ_G0033952) #10	Scn11a (MGP_SPRETEiJ_G0033953) #12	Wdr48 (MGP_SPRETEiJ_G0033954) #13	Cx3cr1 (MGP_SPRETEiJ_G0033955) #18	Gorasp1 (MGP_SPRETEiJ_G0033956) #14	Ttc21a (MGP_SPRETEiJ_G0033957) #15	Csrnp1 (MGP_SPRETEiJ_G0033958) #16	MGP_SPRETEiJ_G0033959 #17	Ccr8 (MGP_SPRETEiJ_G0033960) #19	Slc25a38 (MGP_SPRETEiJ_G0033961) #20	Rpsa (MGP_SPRETEiJ_G0033962) #22	Mobp (MGP_SPRETEiJ_G0033963) #23	Myrip (MGP_SPRETEiJ_G0033964) #25	Eif1b (MGP_SPRETEiJ_G0033965) #26	Entpd3 (MGP_SPRETEiJ_G0033966) #27	Rpl14 (MGP_SPRETEiJ_G0033967) #28	Ctnnb1 (MGP_SPRETEiJ_G0033968) #30	Ulk4 (MGP_SPRETEiJ_G0033969) #31	Trak1 (MGP_SPRETEiJ_G0033970) #32	MGP_SPRETEiJ_G0033971	MGP_SPRETEiJ_G0033972 #33	Lyzl4 (MGP_SPRETEiJ_G0033973) #34	Vipr1 (MGP_SPRETEiJ_G0033974) #36	Sec22c (MGP_SPRETEiJ_G0033975)	MGP_SPRETEiJ_G0033976 #37	Nktr (MGP_SPRETEiJ_G0033977)
Mouse	MODERN SPECIES	18	Acaa1a (ENSMUSG00000036138)	Xylb (ENSMUSG00000035769)	Acvr2b (ENSMUSG00000061393)	Exog (ENSMUSG00000042787) #7	Scn5a (ENSMUSG00000032511) #9	Scn10a (ENSMUSG00000034533) #10	Scn11a (ENSMUSG00000034115) #12	Wdr48 (ENSMUSG00000032512) #13	Cx3cr1 (ENSMUSG00000052336) #18	Gorasp1 (ENSMUSG00000032513) #14	Ttc21a (ENSMUSG00000032514) #15	Csrnp1 (ENSMUSG00000032515) #16	Xirp1 (ENSMUSG00000079243) #17	Ccr8 (ENSMUSG00000042262) #19	Slc25a38 (ENSMUSG00000032519) #20	Rpsa (ENSMUSG00000032518) #22	Mobp (ENSMUSG00000032517) #23	Myrip (ENSMUSG00000041794) #25	Eif1b (ENSMUSG00000006941) #26	ENSMUSG00000121572	Entpd3 (ENSMUSG00000041608) #27	Rpl14 (ENSMUSG00000025794) #28	Ctnnb1 (ENSMUSG00000006932) #30	Ulk4 (ENSMUSG00000040936) #31	Trak1 (ENSMUSG00000032536) #32	Cck (ENSMUSG00000032532) #33	Lyzl4 (ENSMUSG00000032530) #34	Vipr1 (ENSMUSG00000032528) #36	Sec22c (ENSMUSG00000061536)	Ss18l2 (ENSMUSG00000032526) #37	Nktr (ENSMUSG00000032525)