Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b #23 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 Primates ANCESTRAL SPECIES 9 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b #23 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000153505.a.b.b ENSGT00940000162764.A Haplorrhini ANCESTRAL SPECIES 9 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b #23 Simiiformes ANCESTRAL SPECIES 11 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 Cebidae ANCESTRAL SPECIES 7 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00940000153434.a.b.a.b ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000164141 ENSGT00940000156859 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 Marmoset MODERN SPECIES ENSCJAG00000076862 #7 ENSCJAG00000067353 #8 CTSV (ENSCJAG00000046004) #9 ENSCJAG00000064535 #10 ENSCJAG00000047796 #11 SLC35D2 (ENSCJAG00000012556) #12 ENSCJAG00000040778 #13 HABP4 (ENSCJAG00000012589) #14 ENSCJAG00000012598 #15 ENSCJAG00000061833 #16 PRXL2C (ENSCJAG00000076685) #17 ZNF484 (ENSCJAG00000005536) #18 ENSCJAG00000084670 #19 GAS1 (ENSCJAG00000062210) #20 ENSCJAG00000074564 #21 DAPK1 (ENSCJAG00000005569) #22 ENSCJAG00000005635 #23 ENSCJAG00000072229 #24 ENSCJAG00000051243 #25 DIRAS2 (ENSCJAG00000039042) #26 ENSCJAG00000062354 #27 SYK (ENSCJAG00000005666) #28 ENSCJAG00000005695 #29 NFIL3 (ENSCJAG00000005728) #30 ENSCJAG00000073981 #31 ENSCJAG00000086138 #32 GADD45G (ENSCJAG00000075792) #33 SEMA4D (ENSCJAG00000007883) #34 SECISBP2 (ENSCJAG00000007806) #35 CKS2 (ENSCJAG00000082907) #36 SHC3 (ENSCJAG00000011207) #37 Cebidae_a ANCESTRAL SPECIES 85 ENSGT00940000158577 ENSGT00940000158947.v ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00940000163051 ENSGT01050000244891.B.i.b ENSGT00940000154367.a #9 ENSGT00530000069333.a ENSGT00390000006208.b.b ENSGT00940000160228 ENSGT00510000048363 #17 ENSGT01010000222530.b.a.a #16 ENSGT00940000155950 #15 ENSGT00520000055591.b #14 ENSGT00670000098074 #13 ENSGT00940000160237 #12 ENSGT00940000160266 ENSGT00940000161328 Capuchin MODERN SPECIES 196 ENSCCAG00000009928 DAPK1 (ENSCCAG00000021962) #22 CTSL (ENSCCAG00000021572) #23 ENSCCAG00000034381 ZNF782 (ENSCCAG00000032117) ENSCCAG00000023112 CTSV (ENSCCAG00000030717) #9 FAM240B (ENSCCAG00000037201) ENSCCAG00000027284 ENSCCAG00000037426 ENSCCAG00000023018 ENSCCAG00000021897 ENSCCAG00000036180 ENSCCAG00000025019 ENSCCAG00000032829 ENSCCAG00000031010 PRXL2C (ENSCCAG00000021330) #17 Bolivian squirrel monkey MODERN SPECIES 183 GKAP1 (ENSSBOG00000029396) KIF27 (ENSSBOG00000031089) C9orf64 (ENSSBOG00000032802) ENSSBOG00000027191 SLC28A3 (ENSSBOG00000029893) NTRK2 (ENSSBOG00000023944) ENSSBOG00000029126 AGTPBP1 (ENSSBOG00000027632) NAA35 (ENSSBOG00000006930) GOLM1 (ENSSBOG00000034888) ENSSBOG00000026003 ISCA1 (ENSSBOG00000021772) ENSSBOG00000020099 DAPK1 (ENSSBOG00000027113) #22 CTSL (ENSSBOG00000026254) #23 ENSSBOG00000017777 ENSSBOG00000020207 ZNF782 (ENSSBOG00000023730) ENSSBOG00000031699 CTSV (ENSSBOG00000033822) #9 FAM240B (ENSSBOG00000034487) ENSSBOG00000008205 ENSSBOG00000032397 ENSSBOG00000023397 ENSSBOG00000035504 ENSSBOG00000031502 ZNF658 (ENSSBOG00000024932) ENSSBOG00000026738 ZNF484 (ENSSBOG00000028893) #18 Mas night monkey MODERN SPECIES 581 AGTPBP1 (ENSANAG00000025583) NAA35 (ENSANAG00000036078) GOLM1 (ENSANAG00000024292) C9orf153 (ENSANAG00000038441) ENSANAG00000038240 ENSANAG00000034367 ISCA1 (ENSANAG00000026510) TUT7 (ENSANAG00000025848) ENSANAG00000035695 GAS1 (ENSANAG00000019938) #20 ENSANAG00000034385 ENSANAG00000008506 DAPK1 (ENSANAG00000032154) #22 CTSL (ENSANAG00000022110) #23 SUSD3 (ENSANAG00000030750) CARD19 (ENSANAG00000036585) NINJ1 (ENSANAG00000035470) WNK2 (ENSANAG00000023375) ENSANAG00000032358 FAM120A (ENSANAG00000005846) PHF2 (ENSANAG00000027644) BARX1 (ENSANAG00000025328) PTPDC1 (ENSANAG00000022660) ENSANAG00000031218 ZNF169 (ENSANAG00000030924) CDK20 (ENSANAG00000033129) #11 ENSANAG00000025700 ENSANAG00000022939 Catarrhini ANCESTRAL SPECIES 13 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00900000143482 ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00510000046985.h.b.a.b ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00510000046985.h.b.a.b ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00940000154281.m.b.a.a.a.b ENSGT00950000182964.a.b.a #33 Sooty mangabey MODERN SPECIES 629 KIF27 (ENSCATG00000042961) C9orf64 (ENSCATG00000036011) HNRNPK (ENSCATG00000036875) SLC28A3 (ENSCATG00000044611) ENSCATG00000000743 NTRK2 (ENSCATG00000040423) AGTPBP1 (ENSCATG00000044576) ENSCATG00000001301 NAA35 (ENSCATG00000042793) ENSCATG00000033608 C9orf153 (ENSCATG00000042082) ISCA1 (ENSCATG00000042807) TUT7 (ENSCATG00000032888) GAS1 (ENSCATG00000011030) #20 ENSCATG00000042393 DAPK1 (ENSCATG00000033936) #22 CTSL (ENSCATG00000044799) #23 ENSCATG00000010556 CDK20 (ENSCATG00000016899) #11 ENSCATG00000011713 ENSCATG00000016774 SPIN1 (ENSCATG00000030976) NXNL2 (ENSCATG00000038968) ENSCATG00000030800 ENSCATG00000022256 S1PR3 (ENSCATG00000005549) SHC3 (ENSCATG00000043648) #37 CKS2 (ENSCATG00000036628) #36 SECISBP2 (ENSCATG00000008304) #35 SEMA4D (ENSCATG00000044690) #34 ENSCATG00000012439 Drill MODERN SPECIES 500 ENSMLEG00000042000 C9orf153 (ENSMLEG00000013492) ISCA1 (ENSMLEG00000038112) TUT7 (ENSMLEG00000027049) DAPK1 (ENSMLEG00000033258) #22 CTSL (ENSMLEG00000036785) #23 ENSMLEG00000035282 CDK20 (ENSMLEG00000035229) #11 ENSMLEG00000044314 ENSMLEG00000000797 SPIN1 (ENSMLEG00000035080) NXNL2 (ENSMLEG00000033545) ENSMLEG00000010964 S1PR3 (ENSMLEG00000028481) SHC3 (ENSMLEG00000004268) #37 CKS2 (ENSMLEG00000035685) #36 SECISBP2 (ENSMLEG00000028868) #35 SEMA4D (ENSMLEG00000037083) #34 ENSMLEG00000037750 GADD45G (ENSMLEG00000031770) #33 Olive baboon MODERN SPECIES 4 KIF27 (ENSPANG00000024879) C9orf64 (ENSPANG00000024880) HNRNPK (ENSPANG00000024881) RMI1 (ENSPANG00000041381) SLC28A3 (ENSPANG00000024883) NTRK2 (ENSPANG00000024884) AGTPBP1 (ENSPANG00000024885) NAA35 (ENSPANG00000024887) GOLM1 (ENSPANG00000024888) ENSPANG00000040510 ISCA1 (ENSPANG00000024889) TUT7 (ENSPANG00000024890) GAS1 (ENSPANG00000024891) #20 ENSPANG00000045591 ENSPANG00000042494 DAPK1 (ENSPANG00000024892) #22 CTSL (ENSPANG00000024640) #23 ENSPANG00000024894 CDK20 (ENSPANG00000024895) #11 ENSPANG00000043828 ENSPANG00000050659 ENSPANG00000033303 ENSPANG00000043424 SPIN1 (ENSPANG00000024896) NXNL2 (ENSPANG00000042917) S1PR3 (ENSPANG00000000294) SHC3 (ENSPANG00000024872) #37 SECISBP2 (ENSPANG00000024873) #35 SEMA4D (ENSPANG00000024874) #34 GADD45G (ENSPANG00000039784) #33 ENSPANG00000046714 Macaca ANCESTRAL SPECIES 10 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00910000147913 ENSGT00940000158196 #26 ENSGT00940000159053 #28 Macaca_a ANCESTRAL SPECIES 10 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000156859 ENSGT00940000154259.l.c.a.b.a ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00950000182964.a.b.a #33 ENSGT00940000158196 #26 ENSGT00940000159053 #28 ENSGT00940000157484 #29 Crab-eating macaque MODERN SPECIES 6 KIF27 (ENSMFAG00000041308) C9orf64 (ENSMFAG00000041147) HNRNPK (ENSMFAG00000042755) RMI1 (ENSMFAG00000013223) SLC28A3 (ENSMFAG00000003710) ENSMFAG00000056127 NTRK2 (ENSMFAG00000045094) AGTPBP1 (ENSMFAG00000039578) NAA35 (ENSMFAG00000041931) GOLM1 (ENSMFAG00000043796) ISCA1 (ENSMFAG00000038304) ENSMFAG00000002021 ENSMFAG00000057265 TUT7 (ENSMFAG00000000971) ENSMFAG00000027241 DAPK1 (ENSMFAG00000037117) #22 ENSMFAG00000056529 CTSL (ENSMFAG00000045668) #23 ENSMFAG00000050654 ENSMFAG00000037467 CDK20 (ENSMFAG00000043443) #11 ENSMFAG00000052795 ENSMFAG00000013877 ENSMFAG00000058644 SPIN1 (ENSMFAG00000002525) NXNL2 (ENSMFAG00000045135) S1PR3 (ENSMFAG00000004814) ENSMFAG00000054454 SHC3 (ENSMFAG00000041328) #37 DIRAS2 (ENSMFAG00000060966) #26 SYK (ENSMFAG00000033243) #28 Rhesus MODERN SPECIES 6 ENSMMUG00000054329 HNRNPK (ENSMMUG00000018871) RMI1 (ENSMMUG00000018875) SLC28A3 (ENSMMUG00000008685) NTRK2 (ENSMMUG00000023117) AGTPBP1 (ENSMMUG00000008801) NAA35 (ENSMMUG00000001898) GOLM1 (ENSMMUG00000001900) C15H9orf153 (ENSMMUG00000058481) ISCA1 (ENSMMUG00000003399) TUT7 (ENSMMUG00000003401) ENSMMUG00000003411 GAS1 (ENSMMUG00000062912) #20 ENSMMUG00000059207 ENSMMUG00000060761 DAPK1 (ENSMMUG00000017053) #22 CTSL (ENSMMUG00000017609) #23 ENSMMUG00000013517 CDK20 (ENSMMUG00000010438) #11 SPIN1 (ENSMMUG00000016295) NXNL2 (ENSMMUG00000008414) ENSMMUG00000049479 S1PR3 (ENSMMUG00000043913) SHC3 (ENSMMUG00000039355) #37 CKS2 (ENSMMUG00000064761) #36 SECISBP2 (ENSMMUG00000012532) #35 SEMA4D (ENSMMUG00000008629) #34 GADD45G (ENSMMUG00000048737) #33 DIRAS2 (ENSMMUG00000007223) #26 SYK (ENSMMUG00000001748) #28 AUH (ENSMMUG00000015798) #29 Pig-tailed macaque MODERN SPECIES 272 GKAP1 (ENSMNEG00000030371) KIF27 (ENSMNEG00000038382) C9orf64 (ENSMNEG00000045117) HNRNPK (ENSMNEG00000044879) SLC28A3 (ENSMNEG00000036156) NTRK2 (ENSMNEG00000029886) AGTPBP1 (ENSMNEG00000027437) ENSMNEG00000031442 NAA35 (ENSMNEG00000020190) GOLM1 (ENSMNEG00000044908) ENSMNEG00000028422 ISCA1 (ENSMNEG00000030750) TUT7 (ENSMNEG00000031427) GAS1 (ENSMNEG00000010226) #20 ENSMNEG00000043846 DAPK1 (ENSMNEG00000044385) #22 CTSL (ENSMNEG00000042546) #23 ENSMNEG00000032591 CDK20 (ENSMNEG00000034650) #11 ENSMNEG00000043228 ENSMNEG00000014068 SPIN1 (ENSMNEG00000038251) NXNL2 (ENSMNEG00000014676) ENSMNEG00000037607 ENSMNEG00000031176 S1PR3 (ENSMNEG00000007167) ENSMNEG00000018696 SHC3 (ENSMNEG00000036450) #37 CKS2 (ENSMNEG00000032033) #36 SECISBP2 (ENSMNEG00000031737) #35 SEMA4D (ENSMNEG00000033475) #34 Vervet Monkey MODERN SPECIES 3 UBQLN1 (ENSCSAG00000007613) GKAP1 (ENSCSAG00000007603) KIF27 (ENSCSAG00000007594) C9orf64 (ENSCSAG00000007582) ENSCSAG00000007560 RMI1 (ENSCSAG00000018503) SLC28A3 (ENSCSAG00000007516) NTRK2 (ENSCSAG00000007484) AGTPBP1 (ENSCSAG00000007472) NAA35 (ENSCSAG00000007444) GOLM1 (ENSCSAG00000007433) C9orf153 (ENSCSAG00000007422) ISCA1 (ENSCSAG00000007415) TUT7 (ENSCSAG00000007408) GAS1 (ENSCSAG00000018505) #20 DAPK1 (ENSCSAG00000007395) #22 CTSL (ENSCSAG00000007387) #23 ENSCSAG00000007375 CDK20 (ENSCSAG00000007347) #11 SPIN1 (ENSCSAG00000007339) NXNL2 (ENSCSAG00000007331) S1PR3 (ENSCSAG00000018507) SHC3 (ENSCSAG00000007327) #37 ENSCSAG00000007319 #36 SECISBP2 (ENSCSAG00000007310) #35 SEMA4D (ENSCSAG00000007299) #34 GADD45G (ENSCSAG00000007287) #33 DIRAS2 (ENSCSAG00000018509) #26 SYK (ENSCSAG00000007280) #28 AUH (ENSCSAG00000007270) #29 NFIL3 (ENSCSAG00000018511) #30 Rhinopithecus ANCESTRAL SPECIES 487 ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00410000025793.b.s.b Golden snub-nosed monkey MODERN SPECIES 691 ENSRROG00000035077 C9orf153 (ENSRROG00000042498) ISCA1 (ENSRROG00000036259) TUT7 (ENSRROG00000034432) ENSRROG00000035540 DAPK1 (ENSRROG00000043192) #22 CTSL (ENSRROG00000038398) #23 ENSRROG00000017930 ENSRROG00000044206 CDK20 (ENSRROG00000029181) #11 Black snub-nosed monkey MODERN SPECIES 2138 DAPK1 (ENSRBIG00000039301) #22 CTSL (ENSRBIG00000034074) #23 ENSRBIG00000000574 Hominoidea ANCESTRAL SPECIES 23 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00900000143482 ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00910000147384 ENSGT00940000154281.m.b.a.a.a.b Hominidae ANCESTRAL SPECIES 10 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00900000143482 ENSGT00940000159128 #11 ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00910000147384 ENSGT00940000154281.m.b.a.a.a.b Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000008742 ENSGT00940000157487.mb.b ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00900000143482 ENSGT00940000159128 #11 ENSGT00940000156453.a.c.b ENSGT00390000017838.d ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01000000215830 ENSGT01050000244887.A.b.b ENSGT00910000147291 ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 Homo/Pan group ANCESTRAL SPECIES 16 ENSGT00940000157487.mb.b ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00940000164155 ENSGT00490000043385.u.b ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00900000143482 ENSGT00940000159128 #11 ENSGT00940000156453.a.c.b ENSGT00390000017838.d ENSGT00950000182925.D.a.a.b.a ENSGT00940000161260 ENSGT00620000088704 ENSGT01050000244887.A.b.b ENSGT00950000182870.a.a.a.b #37 ENSGT00950000182971.C.ib #36 ENSGT00490000043356.b #35 ENSGT00940000159594 #34 ENSGT00910000147384 ENSGT00940000154281.m.b.a.a.a.b Pan ANCESTRAL SPECIES 36 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00940000157487.mb.b.b ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385.v ENSGT00940000156859 ENSGT00390000009819.a.b.a.a.a.a.a ENSGT00390000001195.a #20 ENSGT00940000155689.d ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.g #23 ENSGT00950000183043.a.b.b.a.a.a.a.a.b Bonobo MODERN SPECIES 22 ENSPPAG00000029481 GOLM1 (ENSPPAG00000027663) NAA35 (ENSPPAG00000033315) ENSPPAG00000042015 C9orf64 (ENSPPAG00000028224) HNRNPK (ENSPPAG00000043778) RMI1 (ENSPPAG00000006649) SLC28A3 (ENSPPAG00000037370) NTRK2 (ENSPPAG00000037720) AGTPBP1 (ENSPPAG00000043950) ISCA1 (ENSPPAG00000039216) TUT7 (ENSPPAG00000038548) ENSPPAG00000028081 GAS1 (ENSPPAG00000040805) #20 ENSPPAG00000006348 DAPK1 (ENSPPAG00000036602) #22 CTSL (ENSPPAG00000030463) #23 ENSPPAG00000034286 ENSPPAG00000037489 SPATA31E1 (ENSPPAG00000026411) ENSPPAG00000005637 ENSPPAG00000007240 CDK20 (ENSPPAG00000036346) #11 ENSPPAG00000018138 ENSPPAG00000026596 ENSPPAG00000010779 SPIN1 (ENSPPAG00000028912) NXNL2 (ENSPPAG00000039010) ENSPPAG00000041628 S1PR3 (ENSPPAG00000034913) ENSPPAG00000037790 Chimpanzee MODERN SPECIES 22 SLC28A3 (ENSPTRG00000023914) NTRK2 (ENSPTRG00000021064) AGTPBP1 (ENSPTRG00000021066) ENSPTRG00000052749 NAA35 (ENSPTRG00000021071) GOLM1 (ENSPTRG00000021072) C9H9orf153 (ENSPTRG00000029236) AQP7B (ENSPTRG00000020859) ENSPTRG00000043836 ENSPTRG00000048110 TUT7 (ENSPTRG00000021076) ENSPTRG00000048080 GAS1 (ENSPTRG00000045567) #20 ENSPTRG00000021078 ENSPTRG00000044565 DAPK1 (ENSPTRG00000023384) #22 CTSL (ENSPTRG00000021080) #23 ENSPTRG00000044081 SPATA31E1 (ENSPTRG00000021083) ENSPTRG00000048803 CDK20 (ENSPTRG00000021084) #11 ENSPTRG00000049097 ENSPTRG00000046200 ENSPTRG00000018839 SPIN1 (ENSPTRG00000021088) NXNL2 (ENSPTRG00000021089) C9H9orf47 (ENSPTRG00000029228) S1PR3 (ENSPTRG00000034511) ENSPTRG00000042984 ENSPTRG00000052005 SHC3 (ENSPTRG00000045506) #37 Human MODERN SPECIES 21 UBQLN1 (ENSG00000135018) GKAP1 (ENSG00000165113) KIF27 (ENSG00000165115) C9orf64 (ENSG00000165118) HNRNPK (ENSG00000165119) RMI1 (ENSG00000178966) SLC28A3 (ENSG00000197506) NTRK2 (ENSG00000148053) AGTPBP1 (ENSG00000135049) NAA35 (ENSG00000135040) GOLM1 (ENSG00000135052) C9orf153 (ENSG00000187753) ISCA1 (ENSG00000135070) TUT7 (ENSG00000083223) GAS1 (ENSG00000180447) #20 DAPK1 (ENSG00000196730) #22 CTSL (ENSG00000135047) #23 SPATA31E1 (ENSG00000177992) SPATA31C1 (ENSG00000230246) ENSG00000283205 CDK20 (ENSG00000156345) #11 SPATA31C2 (ENSG00000177910) SPIN1 (ENSG00000106723) NXNL2 (ENSG00000130045) S1PR3 (ENSG00000213694) SHC3 (ENSG00000148082) #37 CKS2 (ENSG00000123975) ##36 SECISBP2 (ENSG00000187742) #35 SEMA4D (ENSG00000187764) #34 GADD45G (ENSG00000130222) #33 DIRAS2 (ENSG00000165023) #26 Gorilla MODERN SPECIES 22 C9orf64 (ENSGGOG00000011293) HNRNPK (ENSGGOG00000015500) RMI1 (ENSGGOG00000014198) SLC28A3 (ENSGGOG00000001212) NTRK2 (ENSGGOG00000014303) AGTPBP1 (ENSGGOG00000007838) ENSGGOG00000039438 NAA35 (ENSGGOG00000011527) GOLM1 (ENSGGOG00000012485) ENSGGOG00000007511 ISCA1 (ENSGGOG00000007518) TUT7 (ENSGGOG00000007523) GAS1 (ENSGGOG00000027819) #20 ENSGGOG00000023282 ENSGGOG00000043464 DAPK1 (ENSGGOG00000000084) #22 ENSGGOG00000010750 CTSL (ENSGGOG00000027208) #23 ENSGGOG00000041754 ENSGGOG00000043447 ENSGGOG00000040889 ENSGGOG00000022266 SPIN1 (ENSGGOG00000007616) NXNL2 (ENSGGOG00000027419) ENSGGOG00000022978 ENSGGOG00000042412 S1PR3 (ENSGGOG00000039326) ENSGGOG00000037434 SHC3 (ENSGGOG00000012520) #37 CKS2 (ENSGGOG00000022165) #36 SECISBP2 (ENSGGOG00000000453) #35 Orangutan MODERN SPECIES 22 KIF27 (ENSPPYG00000019325) C9orf64 (ENSPPYG00000019326) HNRNPK (ENSPPYG00000019327) RMI1 (ENSPPYG00000019328) SLC28A3 (ENSPPYG00000019329) NTRK2 (ENSPPYG00000019331) AGTPBP1 (ENSPPYG00000019333) ENSPPYG00000038290 ENSPPYG00000030552 NAA35 (ENSPPYG00000019336) GOLM1 (ENSPPYG00000019337) ENSPPYG00000019338 ENSPPYG00000019339 TUT7 (ENSPPYG00000019340) GAS1 (ENSPPYG00000019342) #20 DAPK1 (ENSPPYG00000019346) #22 CTSL (ENSPPYG00000019347) #23 ENSPPYG00000038481 ENSPPYG00000019876 ENSPPYG00000019349 ENSPPYG00000034905 ENSPPYG00000038017 BICD2 (ENSPPYG00000019382) IPPK (ENSPPYG00000019381) CENPP (ENSPPYG00000040435) ECM2 (ENSPPYG00000019380) ASPN (ENSPPYG00000019379) OMD (ENSPPYG00000019378) OGN (ENSPPYG00000019377) NOL8 (ENSPPYG00000019375) IARS1 (ENSPPYG00000019374) Gibbon MODERN SPECIES 10 KIF27 (ENSNLEG00000003410) C9orf64 (ENSNLEG00000003473) HNRNPK (ENSNLEG00000003486) RMI1 (ENSNLEG00000003625) SLC28A3 (ENSNLEG00000003626) NTRK2 (ENSNLEG00000003678) AGTPBP1 (ENSNLEG00000003752) ENSNLEG00000028632 ENSNLEG00000033935 NAA35 (ENSNLEG00000003793) GOLM1 (ENSNLEG00000003785) ENSNLEG00000005127 ISCA1 (ENSNLEG00000031606) TUT7 (ENSNLEG00000005138) ENSNLEG00000036213 DAPK1 (ENSNLEG00000005244) #22 CTSL (ENSNLEG00000005327) #23 ENSNLEG00000035327 CDK20 (ENSNLEG00000005434) #11 ENSNLEG00000027358 SPIN1 (ENSNLEG00000035232) NXNL2 (ENSNLEG00000005444) ENSNLEG00000004281 ENSNLEG00000030504 ENSNLEG00000035039 ENSNLEG00000029747 S1PR3 (ENSNLEG00000008685) SHC3 (ENSNLEG00000029655) #37 CKS2 (ENSNLEG00000032243) ##36 SECISBP2 (ENSNLEG00000008739) #35 SEMA4D (ENSNLEG00000000397) #34 Tarsier MODERN SPECIES 5131 DAPK1 (ENSTSYG00000012207) #22 Strepsirrhini ANCESTRAL SPECIES 69 ENSGT00940000164155 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 Bushbaby MODERN SPECIES 358 ENSOGAG00000002125 ENSOGAG00000024982 ENSOGAG00000030296 ENSOGAG00000001827 ISCA1 (ENSOGAG00000015628) TUT7 (ENSOGAG00000015630) ENSOGAG00000033667 GAS1 (ENSOGAG00000028997) #20 ENSOGAG00000034575 DAPK1 (ENSOGAG00000001345) #22 Lemuriformes ANCESTRAL SPECIES 116 ENSGT00940000164155 ENSGT00490000043385.t ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 Mouse lemur MODERN SPECIES 1 ENSMICG00000028473 ECM2 (ENSMICG00000003193) IPPK (ENSMICG00000032514) BICD2 (ENSMICG00000012311) FGD3 (ENSMICG00000012321) SUSD3 (ENSMICG00000007930) CARD19 (ENSMICG00000038201) NINJ1 (ENSMICG00000008675) WNK2 (ENSMICG00000003404) ZNF510 (ENSMICG00000037577) ISCA1 (ENSMICG00000043545) TUT7 (ENSMICG00000016944) GAS1 (ENSMICG00000046960) #20 ENSMICG00000008748 ENSMICG00000037750 DAPK1 (ENSMICG00000017284) #22 AOPEP (ENSMICG00000001153) ENSMICG00000031188 FANCC (ENSMICG00000001158) PTCH1 (ENSMICG00000000721) ENSMICG00000029160 HSD17B3 (ENSMICG00000002001) SLC35D2 (ENSMICG00000002006) #12 ZNF367 (ENSMICG00000038686) #13 HABP4 (ENSMICG00000004381) #14 ENSMICG00000004387 #15 ENSMICG00000016942 C9orf153 (ENSMICG00000043141) ENSMICG00000033407 ENSMICG00000029120 ENSMICG00000026796 Lemuriformes_a ANCESTRAL SPECIES 284 ENSGT00940000164155 ENSGT00490000043385.t ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 Greater bamboo lemur MODERN SPECIES 978 ENSPSMG00000014504 ENSPSMG00000014513 ENSPSMG00000014520 GAS1 (ENSPSMG00000014525) #20 ENSPSMG00000014539 #22 Coquerels sifaka MODERN SPECIES 768 ENSPCOG00000021907 ENSPCOG00000018632 ##7 C9orf153 (ENSPCOG00000020594) ISCA1 (ENSPCOG00000021277) TUT7 (ENSPCOG00000023407) GAS1 (ENSPCOG00000025804) #20 DAPK1 (ENSPCOG00000015755) #22 ENSPCOG00000017521 FBP2 (ENSPCOG00000006489) CTSL (ENSPCOG00000020524) #23 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00390000002550 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 Tree shrew MODERN SPECIES 2536 ENSTBEG00000015687 DAPK1 (ENSTBEG00000015766) #22 Glires ANCESTRAL SPECIES 9 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000153505.a.b.b Rodentia ANCESTRAL SPECIES 9 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000153505.a.b.b ENSGT00940000163051 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000154367.a #9 ENSGT00530000069333.a Myomorpha ANCESTRAL SPECIES 60 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000154367.a #9 ENSGT00530000069333.a Muroidea ANCESTRAL SPECIES 72 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a ENSGT00940000153321.b.b.l.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 ENSGT00940000154367.a #9 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 Cricetidae ANCESTRAL SPECIES 22 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.b.a.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b.b ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000153434.a.b.a.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 Northern American deer mouse MODERN SPECIES 18 2210016F16Rik (ENSPEMG00000018085) Hnrnpk (ENSPEMG00000012825) Slc28a3 (ENSPEMG00000016674) Ntrk2 (ENSPEMG00000000060) ENSPEMG00000030036 Agtpbp1 (ENSPEMG00000003465) Naa35 (ENSPEMG00000020283) Golm1 (ENSPEMG00000021119) 4921517D22Rik (ENSPEMG00000022165) ENSPEMG00000025782 ENSPEMG00000025105 ENSPEMG00000028848 ENSPEMG00000029941 Tut7 (ENSPEMG00000014030) Gas1 (ENSPEMG00000007789) #20 Dapk1 (ENSPEMG00000022627) #22 BC051665 (ENSPEMG00000025235) Ctsll3 (ENSPEMG00000029464) 4930486L24Rik (ENSPEMG00000016874) ENSPEMG00000022155 ENSPEMG00000028441 ENSPEMG00000026019 ENSPEMG00000030527 ENSPEMG00000026470 ENSPEMG00000020375 ENSPEMG00000031098 Ctsj (ENSPEMG00000015113) ENSPEMG00000026728 ENSPEMG00000029752 Ctsr (ENSPEMG00000001393) Cts6 (ENSPEMG00000016021) Prairie vole MODERN SPECIES 3 Kif27 (ENSMOCG00000015570) 2210016F16Rik (ENSMOCG00000017857) ENSMOCG00000001446 Rmi1 (ENSMOCG00000016761) Slc28a3 (ENSMOCG00000005269) Ntrk2 (ENSMOCG00000015461) Agtpbp1 (ENSMOCG00000014650) Naa35 (ENSMOCG00000013999) ENSMOCG00000019507 4921517D22Rik (ENSMOCG00000022999) ENSMOCG00000000876 ENSMOCG00000000209 ENSMOCG00000007812 ENSMOCG00000022892 Gas1 (ENSMOCG00000002738) #20 Dapk1 (ENSMOCG00000016789) #22 ENSMOCG00000012620 ENSMOCG00000019948 4930486L24Rik (ENSMOCG00000005874) Ctsj (ENSMOCG00000013146) ENSMOCG00000000781 ENSMOCG00000013109 ENSMOCG00000020961 Cts8 (ENSMOCG00000005191) Cts7 (ENSMOCG00000001845) ENSMOCG00000010780 Fbp2 (ENSMOCG00000017815) Fbp1 (ENSMOCG00000014907) Aopep (ENSMOCG00000003056) Fancc (ENSMOCG00000001776) Ptch1 (ENSMOCG00000022943) Cricetinae ANCESTRAL SPECIES 20 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.b.a.b ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b.b ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 Golden Hamster MODERN SPECIES 699 Idnk (ENSMAUG00000011365) Ubqln1 (ENSMAUG00000009272) Gkap1 (ENSMAUG00000009206) Kif27 (ENSMAUG00000007799) 2210016F16Rik (ENSMAUG00000001833) ENSMAUG00000015268 Slc28a3 (ENSMAUG00000007466) Ntrk2 (ENSMAUG00000014898) ENSMAUG00000002599 Naa35 (ENSMAUG00000006704) ENSMAUG00000012538 1700014D04Rik (ENSMAUG00000020029) ENSMAUG00000000645 Tut7 (ENSMAUG00000006963) Gas1 (ENSMAUG00000019435) #20 Dapk1 (ENSMAUG00000000180) #22 BC051665 (ENSMAUG00000012142) Ctsll3 (ENSMAUG00000014374) Ctsj (ENSMAUG00000008852) Cts6 (ENSMAUG00000016662) Ctsr (ENSMAUG00000014961) Cts8 (ENSMAUG00000018878) ENSMAUG00000016362 Fbp2 (ENSMAUG00000017596) Fbp1 (ENSMAUG00000015819) Aopep (ENSMAUG00000003279) Fancc (ENSMAUG00000012407) Ptch1 (ENSMAUG00000014816) Ercc6l2 (ENSMAUG00000004820) Hsd17b3 (ENSMAUG00000018759) Slc35d2 (ENSMAUG00000016504) #12 Chinese hamster chok1gshd MODERN SPECIES 317 2210016F16Rik (ENSCGRG00001010344) ENSCGRG00001016951 Rmi1 (ENSCGRG00001004591) Slc28a3 (ENSCGRG00001020206) ENSCGRG00001012376 ENSCGRG00001013499 Agtpbp1 (ENSCGRG00001021345) ENSCGRG00001022085 Golm1 (ENSCGRG00001021525) ENSCGRG00001001460 Spata31d1d (ENSCGRG00001011836) 1700014D04Rik (ENSCGRG00001022165) ENSCGRG00001007037 Tut7 (ENSCGRG00001020605) Gas1 (ENSCGRG00001010171) #20 Dapk1 (ENSCGRG00001000497) #22 BC051665 (ENSCGRG00001008665) ENSCGRG00001014152 ENSCGRG00001019274 4930486L24Rik (ENSCGRG00001023066) ENSCGRG00001024602 ENSCGRG00001015895 Ctsj (ENSCGRG00001024764) Ctsq (ENSCGRG00001002399) Cts6 (ENSCGRG00001022925) Cts8 (ENSCGRG00001013704) Fbp2 (ENSCGRG00001022515) Fbp1 (ENSCGRG00001009150) Aopep (ENSCGRG00001012713) Fancc (ENSCGRG00001013491) Ptch1 (ENSCGRG00001010176) Murinae ANCESTRAL SPECIES 21 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b ENSGT00390000010930 ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b.e ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 Mus ANCESTRAL SPECIES 18 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00800000125290 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b.e ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a Mus_A ANCESTRAL SPECIES 14 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00800000125290 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b ENSGT00390000010930.b ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b.e ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b ENSGT00390000015513.a.a.b Mus_B ANCESTRAL SPECIES 13 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00800000125290 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.d ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b.e ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b Mus_C ANCESTRAL SPECIES 10 ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00950000183043.a.b.b.a.b.u.a.b.b ENSGT00950000183043.a.b.b.a.b.u.a.b.a ENSGT00950000183043.a.b.b.a.b.u.b ENSGT00950000183043.a.b.b.a.a.a.b ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00800000125290 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b.a.a.a.b ENSGT00940000153321.b.b.l.b.a.a.a.a ENSGT00940000153321.b.b.l.b.a.b ENSGT00940000153321.b.b.l.b.b.b.b.b.c ENSGT00390000010930.b ENSGT00940000153321.b.b.l.b.b.b.b.b.d ENSGT00390000010930.a ENSGT00940000153321.b.b.l.b.b.b.b.a ENSGT00940000153321.b.b.l.b.b.b.a.b.e ENSGT00940000153321.b.b.l.b.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.b.a.a.b ENSGT00940000153321.b.b.l.b.b.a.a.a ENSGT00940000153321.b.b.l.b.b.a.a.b.b ENSGT00940000153321.b.b.l.b.b.a.b.a ENSGT00940000153321.b.b.l.b.b.a.b.b spretus MODERN SPECIES 4 Hnrnpk (MGP_SPRETEiJ_G0019479) Rmi1 (MGP_SPRETEiJ_G0019480) Slc28a3 (MGP_SPRETEiJ_G0019481) Ntrk2 (MGP_SPRETEiJ_G0019482) Agtpbp1 (MGP_SPRETEiJ_G0019483) Naa35 (MGP_SPRETEiJ_G0019484) MGP_SPRETEiJ_G0019485 4921517D22Rik (MGP_SPRETEiJ_G0019486) Spata31d1a (MGP_SPRETEiJ_G0019487) Spata31d1d (MGP_SPRETEiJ_G0019488) 1700014D04Rik (MGP_SPRETEiJ_G0019489) MGP_SPRETEiJ_G0019490 Tut7 (MGP_SPRETEiJ_G0019491) Gas1 (MGP_SPRETEiJ_G0019492) #20 MGP_SPRETEiJ_G0019493 Dapk1 (MGP_SPRETEiJ_G0019494) #22 BC051665 (MGP_SPRETEiJ_G0019495) Ctsll3 (MGP_SPRETEiJ_G0019496) 4930486L24Rik (MGP_SPRETEiJ_G0019497) Ctla2b (MGP_SPRETEiJ_G0019498) Tpbpb (MGP_SPRETEiJ_G0019499) Ctla2a (MGP_SPRETEiJ_G0019500) MGP_SPRETEiJ_G0019501 Ctsj (MGP_SPRETEiJ_G0019502) Ctsq (MGP_SPRETEiJ_G0019503) Ctsr (MGP_SPRETEiJ_G0019504) Cts6 (MGP_SPRETEiJ_G0019505) Cts8 (MGP_SPRETEiJ_G0019506) Cts7 (MGP_SPRETEiJ_G0019507) Ctsm (MGP_SPRETEiJ_G0019508) MGP_SPRETEiJ_G0019509 Steppe mouse MODERN SPECIES 3363 ENSMSIG00000020732 Ntrk2 (ENSMSIG00000020750) Agtpbp1 (ENSMSIG00000021104) Naa35 (ENSMSIG00000021291) Golm1 (ENSMSIG00000021316) 4921517D22Rik (ENSMSIG00000021349) Spata31d1a (ENSMSIG00000021365) Spata31d1b (ENSMSIG00000021379) Spata31d1d (ENSMSIG00000021387) 1700014D04Rik (ENSMSIG00000021396) ENSMSIG00000021410 Tut7 (ENSMSIG00000021435) Gas1 (ENSMSIG00000021556) #20 ENSMSIG00000021571 ENSMSIG00000021574 Dapk1 (ENSMSIG00000021579) #22 BC051665 (ENSMSIG00000021609) Ctsll3 (ENSMSIG00000021625) 4930486L24Rik (ENSMSIG00000021647) Ctla2b (ENSMSIG00000021665) Tpbpb (ENSMSIG00000021690) Ctla2a (ENSMSIG00000021719) Tpbpa (ENSMSIG00000021726) Ctsj (ENSMSIG00000021739) Mouse MODERN SPECIES 4 Hnrnpk (ENSMUSG00000021546) Rmi1 (ENSMUSG00000035367) Slc28a3 (ENSMUSG00000021553) Ntrk2 (ENSMUSG00000055254) Agtpbp1 (ENSMUSG00000021557) Naa35 (ENSMUSG00000021555) Golm1 (ENSMUSG00000021556) 4921517D22Rik (ENSMUSG00000049902) Spata31d1a (ENSMUSG00000050876) Spata31d1b (ENSMUSG00000091311) Spata31d1d (ENSMUSG00000043986) 1700014D04Rik (ENSMUSG00000051054) Isca1 (ENSMUSG00000044792) Tut7 (ENSMUSG00000035248) Gas1 (ENSMUSG00000052957) #20 Dapk1 (ENSMUSG00000021559) #22 BC051665 (ENSMUSG00000042243) Ctsll3 (ENSMUSG00000056728) 4930486L24Rik (ENSMUSG00000050345) Ctla2b (ENSMUSG00000074874) Gm49391 (ENSMUSG00000114432) Tpbpb (ENSMUSG00000062705) Ctla2a (ENSMUSG00000044258) Tpbpa (ENSMUSG00000033834) Ctsj (ENSMUSG00000055298) Ctsq (ENSMUSG00000021439) Ctsr (ENSMUSG00000055679) Cts6 (ENSMUSG00000021441) Cts8 (ENSMUSG00000057446) Cts7 (ENSMUSG00000021440) Ctsm (ENSMUSG00000074871) Ryukyu mouse MODERN SPECIES 4 Rmi1 (MGP_CAROLIEiJ_G0018600) Slc28a3 (MGP_CAROLIEiJ_G0018601) Ntrk2 (MGP_CAROLIEiJ_G0018602) Agtpbp1 (MGP_CAROLIEiJ_G0018603) MGP_CAROLIEiJ_G0018604 Golm1 (MGP_CAROLIEiJ_G0018605) 4921517D22Rik (MGP_CAROLIEiJ_G0018606) MGP_CAROLIEiJ_G0018607 MGP_CAROLIEiJ_G0018608 Spata31d1d (MGP_CAROLIEiJ_G0018609) 1700014D04Rik (MGP_CAROLIEiJ_G0018610) MGP_CAROLIEiJ_G0018611 Tut7 (MGP_CAROLIEiJ_G0018612) Gas1 (MGP_CAROLIEiJ_G0018613) #20 MGP_CAROLIEiJ_G0018614 Dapk1 (MGP_CAROLIEiJ_G0018615) #22 BC051665 (MGP_CAROLIEiJ_G0018616) Ctsll3 (MGP_CAROLIEiJ_G0018617) 4930486L24Rik (MGP_CAROLIEiJ_G0018618) MGP_CAROLIEiJ_G0018619 MGP_CAROLIEiJ_G0018620 Tpbpb (MGP_CAROLIEiJ_G0018621) MGP_CAROLIEiJ_G0018622 Ctsj (MGP_CAROLIEiJ_G0018623) Ctsr (MGP_CAROLIEiJ_G0018624) Cts6 (MGP_CAROLIEiJ_G0018625) Cts8 (MGP_CAROLIEiJ_G0018626) Cts7 (MGP_CAROLIEiJ_G0018627) Ctsm (MGP_CAROLIEiJ_G0018628) MGP_CAROLIEiJ_G0018629 Fbp2 (MGP_CAROLIEiJ_G0018630) Shrew mouse MODERN SPECIES 7 Rmi1 (MGP_PahariEiJ_G0019664) Slc28a3 (MGP_PahariEiJ_G0019665) Ntrk2 (MGP_PahariEiJ_G0019666) Agtpbp1 (MGP_PahariEiJ_G0019667) Naa35 (MGP_PahariEiJ_G0019668) Golm1 (MGP_PahariEiJ_G0019669) 4921517D22Rik (MGP_PahariEiJ_G0019670) MGP_PahariEiJ_G0019671 Spata31d1b (MGP_PahariEiJ_G0019672) Spata31d1d (MGP_PahariEiJ_G0019673) 1700014D04Rik (MGP_PahariEiJ_G0019674) MGP_PahariEiJ_G0019675 Tut7 (MGP_PahariEiJ_G0019676) Gas1 (MGP_PahariEiJ_G0019677) #20 MGP_PahariEiJ_G0019678 Dapk1 (MGP_PahariEiJ_G0019679) #22 BC051665 (MGP_PahariEiJ_G0019680) Ctsll3 (MGP_PahariEiJ_G0019681) 4930486L24Rik (MGP_PahariEiJ_G0019682) MGP_PahariEiJ_G0019683 MGP_PahariEiJ_G0019684 MGP_PahariEiJ_G0019685 MGP_PahariEiJ_G0019686 Ctsj (MGP_PahariEiJ_G0019687) Ctsr (MGP_PahariEiJ_G0019688) Cts6 (MGP_PahariEiJ_G0019689) Cts8 (MGP_PahariEiJ_G0019690) Cts7 (MGP_PahariEiJ_G0019691) MGP_PahariEiJ_G0019692 MGP_PahariEiJ_G0019693 Fbp2 (MGP_PahariEiJ_G0019694) Rat MODERN SPECIES 8 Hnrnpk (ENSRNOG00000019113) Rmi1 (ENSRNOG00000019108) Slc28a3 (ENSRNOG00000018853) Ntrk2 (ENSRNOG00000018839) Agtpbp1 (ENSRNOG00000018651) ENSRNOG00000064986 Naa35 (ENSRNOG00000018417) Golm1 (ENSRNOG00000018400) LOC100912252 (ENSRNOG00000042206) Spata31d3 (ENSRNOG00000056413) Spata31d1b (ENSRNOG00000069288) Spata31d1 (ENSRNOG00000027014) AABR07026929.1 (ENSRNOG00000042026) Isca1 (ENSRNOG00000018343) Tut7 (ENSRNOG00000016629) Dapk1 (ENSRNOG00000018198) #22 RGD1308751 (ENSRNOG00000039954) Ctsll3 (ENSRNOG00000069877) Testin (ENSRNOG00000018028) Ctla2a (ENSRNOG00000039971) Tpbpa (ENSRNOG00000039975) RGD1564827 (ENSRNOG00000069712) Ctsj (ENSRNOG00000046476) Ctsql2 (ENSRNOG00000017946) LOC100364523 (ENSRNOG00000056519) Ctsq (ENSRNOG00000048693) AABR07043347.1 (ENSRNOG00000051410) MGC114246 (ENSRNOG00000039990) Ctsr (ENSRNOG00000017888) Cts8 (ENSRNOG00000040000) Cts8l1 (ENSRNOG00000065532) Upper Galilee mountains blind mole rat MODERN SPECIES 827 ENSNGAG00000022920 ENSNGAG00000022758 ENSNGAG00000021770 ENSNGAG00000012268 ENSNGAG00000016586 Dapk1 (ENSNGAG00000023610) #22 ENSNGAG00000023296 ENSNGAG00000023443 ENSNGAG00000001073 ENSNGAG00000006724 ENSNGAG00000010869 Naa35 (ENSNGAG00000012706) Lesser Egyptian jerboa MODERN SPECIES 231 ENSJJAG00000021479 ENSJJAG00000021622 ENSJJAG00000000106 ENSJJAG00000000283 ENSJJAG00000000397 ENSJJAG00000000580 ENSJJAG00000000674 Dapk1 (ENSJJAG00000005305) #22 Kangaroo rat MODERN SPECIES 462 Pom121 (ENSDORG00000010532) Nsun5 (ENSDORG00000010530) Trim50 (ENSDORG00000015388) ENSDORG00000015387 Fzd9 (ENSDORG00000012533) Baz1b (ENSDORG00000012540) ENSDORG00000026621 Tbl2 (ENSDORG00000012166) Mlxipl (ENSDORG00000012167) ENSDORG00000024551 ENSDORG00000009046 ENSDORG00000026356 ENSDORG00000028702 Gas1 (ENSDORG00000011479) #20 ENSDORG00000027295 Dapk1 (ENSDORG00000003214) #22 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b Sciuridae ANCESTRAL SPECIES 6 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374.u ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b Marmotini ANCESTRAL SPECIES 108 ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374.u ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b Alpin marmot MODERN SPECIES 68 DNA2 (ENSMMMG00000009618) RUFY2 (ENSMMMG00000009654) ENSMMMG00000009862 PBLD (ENSMMMG00000009871) ATOH7 (ENSMMMG00000010063) MYPN (ENSMMMG00000010068) HERC4 (ENSMMMG00000010126) ENSMMMG00000010229 ENSMMMG00000010250 CTNNA3 (ENSMMMG00000010289) LRRTM3 (ENSMMMG00000010362) ENSMMMG00000010382 ENSMMMG00000010389 ENSMMMG00000010403 REEP3 (ENSMMMG00000010412) DAPK1 (ENSMMMG00000010458) #22 ENSMMMG00000010528 Marmotini_b ANCESTRAL SPECIES 246 ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 ENSGT00940000153321.b.b.l.b Arctic ground squirrel MODERN SPECIES 302 NAA35 (ENSUPAG00010023699) GOLM1 (ENSUPAG00010023698) ENSUPAG00010023697 ISCA1 (ENSUPAG00010023696) TUT7 (ENSUPAG00010023694) GAS1 (ENSUPAG00010023687) #20 DAPK1 (ENSUPAG00010023679) #22 ENSUPAG00010023673 Squirrel MODERN SPECIES 280 NTRK2 (ENSSTOG00000008937) AGTPBP1 (ENSSTOG00000001961) NAA35 (ENSSTOG00000015631) ENSSTOG00000024100 ENSSTOG00000028077 ISCA1 (ENSSTOG00000000582) TUT7 (ENSSTOG00000000586) DAPK1 (ENSSTOG00000015490) #22 ENSSTOG00000015504 #23 Eurasian red squirrel MODERN SPECIES 6 KIF27 (ENSSVLG00005025080) ENSSVLG00005025013 HNRNPK (ENSSVLG00005024963) RMI1 (ENSSVLG00005024865) ENSSVLG00005024855 ENSSVLG00005024836 SLC28A3 (ENSSVLG00005024780) NTRK2 (ENSSVLG00005024628) AGTPBP1 (ENSSVLG00005024487) NAA35 (ENSSVLG00005024431) GOLM1 (ENSSVLG00005024384) ENSSVLG00005024339 ISCA1 (ENSSVLG00005024297) TUT7 (ENSSVLG00005024220) GAS1 (ENSSVLG00005024195) #20 DAPK1 (ENSSVLG00005024152) #22 ENSSVLG00005024080 #23 ENSSVLG00005024060 Hystricomorpha ANCESTRAL SPECIES 14 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00390000001195.a #20 ENSGT00940000153424.a.b #22 Hystricomorpha_a ANCESTRAL SPECIES 43 ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00940000153424.a.b #22 Hystricomorpha_b ANCESTRAL SPECIES 62 ENSGT00390000003364 ENSGT00940000156437 ENSGT00390000008742 ENSGT00940000157487 ENSGT00390000002374 ENSGT00940000153434.a.a ENSGT00940000161055 ENSGT00390000016025.a ENSGT00940000155181 ENSGT00940000157707 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000164141 ENSGT00490000043385 ENSGT00940000156859 ENSGT00940000153424.a.b #22 Long-tailed chinchilla MODERN SPECIES 139 C9orf64 (ENSCLAG00000002920) HNRNPK (ENSCLAG00000005883) RMI1 (ENSCLAG00000017662) SLC28A3 (ENSCLAG00000005357) ENSCLAG00000005146 NTRK2 (ENSCLAG00000004746) ENSCLAG00000004540 AGTPBP1 (ENSCLAG00000009351) NAA35 (ENSCLAG00000008861) GOLM1 (ENSCLAG00000008736) ENSCLAG00000008692 ENSCLAG00000007775 TUT7 (ENSCLAG00000007535) ENSCLAG00000007415 ENSCLAG00000007321 DAPK1 (ENSCLAG00000006636) #22 Degu MODERN SPECIES 152 HNRNPK (ENSODEG00000005637) RMI1 (ENSODEG00000004954) ENSODEG00000006844 SLC28A3 (ENSODEG00000004732) NTRK2 (ENSODEG00000005490) ENSODEG00000005328 AGTPBP1 (ENSODEG00000005635) NAA35 (ENSODEG00000005083) ENSODEG00000005810 ENSODEG00000019211 ENSODEG00000005480 ENSODEG00000006904 ENSODEG00000006376 ENSODEG00000004592 ENSODEG00000005716 DAPK1 (ENSODEG00000005070) #22 ENSODEG00000005255 ATP12A (ENSODEG00000005612) ENSODEG00000005443 CENPJ (ENSODEG00000004803) ENSODEG00000004571 ENSODEG00000005412 ENSODEG00000007817 ENSODEG00000007655 ENSODEG00000007331 ENSODEG00000019072 ZMYM2 (ENSODEG00000004718) GJB2 (ENSODEG00000019286) GJB6 (ENSODEG00000019244) ENSODEG00000005772 CRYL1 (ENSODEG00000005341) Guinea pig MODERN SPECIES 11 UBQLN1 (ENSCPOG00000004849) ENSCPOG00000023953 GKAP1 (ENSCPOG00000034577) ENSCPOG00000020823 KIF27 (ENSCPOG00000002485) C9orf64 (ENSCPOG00000001990) ENSCPOG00000005024 RMI1 (ENSCPOG00000010177) SLC28A3 (ENSCPOG00000013188) NTRK2 (ENSCPOG00000032833) AGTPBP1 (ENSCPOG00000019771) NAA35 (ENSCPOG00000032357) GOLM1 (ENSCPOG00000003829) ENSCPOG00000032645 TUT7 (ENSCPOG00000002500) DAPK1 (ENSCPOG00000000987) #22 ENSCPOG00000032751 WNT8B (ENSCPOG00000027283) SEC31B (ENSCPOG00000007432) NDUFB8 (ENSCPOG00000024799) HIF1AN (ENSCPOG00000009881) PAX2 (ENSCPOG00000000939) SLF2 (ENSCPOG00000000940) SEMA4G (ENSCPOG00000036564) MRPL43 (ENSCPOG00000040768) TWNK (ENSCPOG00000000950) LZTS2 (ENSCPOG00000035545) ENSCPOG00000000952 SFXN3 (ENSCPOG00000000955) KAZALD1 (ENSCPOG00000015270) TLX1 (ENSCPOG00000003194) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 5 ENSHGLG00000031937 #20 DAPK1 (ENSHGLG00000017803) #22 GOLM1 (ENSHGLG00000017786) NAA35 (ENSHGLG00000017763) AGTPBP1 (ENSHGLG00000017732) ENSHGLG00000039492 ENSHGLG00000039873 NTRK2 (ENSHGLG00000017693) SLC28A3 (ENSHGLG00000017777) ENSHGLG00000033908 RMI1 (ENSHGLG00000048963) ENSHGLG00000036726 ENSHGLG00000048823 ENSHGLG00000032986 ENSHGLG00000018511 ENSHGLG00000034355 ENSHGLG00000032822 Naked mole-rat female MODERN SPECIES 22 TFCP2L1 (ENSHGLG00000041072) GLI2 (ENSHGLG00000004535) INHBB (ENSHGLG00000009209) ENSHGLG00000004693 ENSHGLG00000032912 RALB (ENSHGLG00000037096) TMEM185B (ENSHGLG00000034185) ENSHGLG00000008402 ENSHGLG00000035501 PTPN4 (ENSHGLG00000008471) TMEM177 (ENSHGLG00000014801) ENSHGLG00000012507 CFAP221 (ENSHGLG00000016525) SCTR (ENSHGLG00000014846) TMEM37 (ENSHGLG00000015189) ENSHGLG00000015203 #22 ENSHGLG00000017824 C2orf76 (ENSHGLG00000017852) STEAP3 (ENSHGLG00000041983) ENSHGLG00000047186 C1QL2 (ENSHGLG00000005027) MARCO (ENSHGLG00000007212) EN1 (ENSHGLG00000008502) INSIG2 (ENSHGLG00000048151) ENSHGLG00000016311 ENSHGLG00000042944 DDX18 (ENSHGLG00000016324) ENSHGLG00000034383 ENSHGLG00000044680 ENSHGLG00000010182 ENSHGLG00000040375 Lagomorpha ANCESTRAL SPECIES 150 ENSGT00390000002445 ENSGT00530000063675.b ENSGT00940000156859 ENSGT00940000153424.a.b #22 ENSGT00940000154367.b.f.b #23 ENSGT00940000154367.b.f.a #23 ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000155211 ENSGT00390000016390 ENSGT00940000159011 ENSGT00940000161328 ENSGT00940000163752 ENSGT00940000160266 ENSGT00940000160237 #12 ENSGT00670000098074 #13 ENSGT00520000055591.b #14 ENSGT00940000155950 #15 ENSGT00510000048363 #17 Rabbit MODERN SPECIES FGD3 (ENSOCUG00000015829) ENSOCUG00000037177 FAM120A (ENSOCUG00000010598) PHF2 (ENSOCUG00000011530) BARX1 (ENSOCUG00000006551) PTPDC1 (ENSOCUG00000000256) ENSOCUG00000033944 ENSOCUG00000034725 ENSOCUG00000026137 ENSOCUG00000033846 ENSOCUG00000026720 ENSOCUG00000022253 NAA35 (ENSOCUG00000001990) GOLM1 (ENSOCUG00000001999) TUT7 (ENSOCUG00000010949) DAPK1 (ENSOCUG00000003518) #22 ENSOCUG00000017008 #23 ENSOCUG00000017854 #23 ENSOCUG00000029172 #23 FBP1 (ENSOCUG00000029295) AOPEP (ENSOCUG00000000678) FANCC (ENSOCUG00000010476) PTCH1 (ENSOCUG00000002973) ENSOCUG00000008778 ENSOCUG00000000442 ENSOCUG00000023971 HSD17B3 (ENSOCUG00000008531) SLC35D2 (ENSOCUG00000008540) #12 ENSOCUG00000023077 #14 ENSOCUG00000005332 #15 PRXL2C (ENSOCUG00000013208) #17 Pika MODERN SPECIES 4343 ENSOPRG00000008183 #22 ENSOPRG00000008222 #23