Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000156437 #8	ENSGT00390000008742 #9	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.a ##12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b #29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33	ENSGT00940000159011 #34	ENSGT00940000161328 #35	ENSGT00940000160266 #36	ENSGT00940000160237 #37	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950	ENSGT00510000048363	ENSGT00940000154367.a	ENSGT00530000069333.a
Myomorpha	ANCESTRAL SPECIES	60	ENSGT00940000156437 #8	ENSGT00390000008742 #9	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.a ##12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b #29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33	ENSGT00940000159011 #34	ENSGT00940000161328 #35	ENSGT00940000160266 #36	ENSGT00940000160237 #37	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950	ENSGT00510000048363	ENSGT00940000154367.a	ENSGT00530000069333.a
Muroidea	ANCESTRAL SPECIES	72	ENSGT00940000156437 #8	ENSGT00390000008742 #9	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.a ##12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a #24	ENSGT00940000153321.b.b.l.b.b #29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33	ENSGT00940000159011 #34	ENSGT00940000161328 #35	ENSGT00940000160266 #36	ENSGT00940000160237 #37	ENSGT00670000098074	ENSGT00520000055591.b	ENSGT00940000155950	ENSGT00510000048363	ENSGT00940000154367.a
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.a ##12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b #29	ENSGT00940000153321.b.b.l.b.b.a.b ##29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33
Cricetidae	ANCESTRAL SPECIES	22	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.b.a.b #12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b #29	ENSGT00940000153321.b.b.l.b.b.a.b ##29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33
Cricetinae	ANCESTRAL SPECIES	20	ENSGT00940000157487 #10	ENSGT00390000002374 #11	ENSGT00940000153434.a.b.a.b #12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b #29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33	ENSGT00940000159011 #34	ENSGT00940000161328 #35
Golden Hamster	MODERN SPECIES	699	Idnk (ENSMAUG00000011365) #7	Ubqln1 (ENSMAUG00000009272) #8	Gkap1 (ENSMAUG00000009206) #9	Kif27 (ENSMAUG00000007799) #10	2210016F16Rik (ENSMAUG00000001833) #11	ENSMAUG00000015268 #12	Slc28a3 (ENSMAUG00000007466) #13	Ntrk2 (ENSMAUG00000014898) #14	ENSMAUG00000002599 #15	Naa35 (ENSMAUG00000006704) #16	ENSMAUG00000012538 #17	1700014D04Rik (ENSMAUG00000020029) #18	ENSMAUG00000000645 #19	Tut7 (ENSMAUG00000006963) #20	Gas1 (ENSMAUG00000019435) #21	Dapk1 (ENSMAUG00000000180) #22	BC051665 (ENSMAUG00000012142) #23	Ctsll3 (ENSMAUG00000014374) #24	Ctsj (ENSMAUG00000008852) #25	Cts6 (ENSMAUG00000016662) #26	Ctsr (ENSMAUG00000014961) #27	Cts8 (ENSMAUG00000018878) #28	ENSMAUG00000016362 #29	Fbp2 (ENSMAUG00000017596) #30	Fbp1 (ENSMAUG00000015819) #31	Aopep (ENSMAUG00000003279) #32	Fancc (ENSMAUG00000012407) #33	Ptch1 (ENSMAUG00000014816) #34	Ercc6l2 (ENSMAUG00000004820) #35	Hsd17b3 (ENSMAUG00000018759) #36	Slc35d2 (ENSMAUG00000016504) #37
Chinese hamster chok1gshd	MODERN SPECIES	317	2210016F16Rik (ENSCGRG00001010344) #11	ENSCGRG00001016951 #12	Rmi1 (ENSCGRG00001004591)	Slc28a3 (ENSCGRG00001020206) #13	ENSCGRG00001012376 #14	ENSCGRG00001013499 #14	Agtpbp1 (ENSCGRG00001021345)	ENSCGRG00001022085 #16	Golm1 (ENSCGRG00001021525) #17	ENSCGRG00001001460	Spata31d1d (ENSCGRG00001011836) ##18	1700014D04Rik (ENSCGRG00001022165) #18	ENSCGRG00001007037 #19	Tut7 (ENSCGRG00001020605) #20	Gas1 (ENSCGRG00001010171) #21	Dapk1 (ENSCGRG00001000497) #22	BC051665 (ENSCGRG00001008665) #23	ENSCGRG00001014152 ##29	ENSCGRG00001019274 ##29	4930486L24Rik (ENSCGRG00001023066) ##29	ENSCGRG00001024602 ##29	ENSCGRG00001015895 ##29	Ctsj (ENSCGRG00001024764) #25	Ctsq (ENSCGRG00001002399) ##29	Cts6 (ENSCGRG00001022925) #26	Cts8 (ENSCGRG00001013704) #28	Fbp2 (ENSCGRG00001022515) #30	Fbp1 (ENSCGRG00001009150) #31	Aopep (ENSCGRG00001012713) #32	Fancc (ENSCGRG00001013491) #33	Ptch1 (ENSCGRG00001010176) #34
Cricetidae_B	ANCESTRAL SPECIES	22	ENSGT00390000002374 #11	ENSGT00940000153434.a.a ##12	ENSGT00940000153434.a.b.a.b #12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b.a ##29	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b #29	ENSGT00940000153321.b.b.l.b.b.a.b ##29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32	ENSGT00390000016390 #33
Northern American deer mouse	MODERN SPECIES	18	2210016F16Rik (ENSPEMG00000018085) #11	Hnrnpk (ENSPEMG00000012825) ##12	Slc28a3 (ENSPEMG00000016674) #13	Ntrk2 (ENSPEMG00000000060) #14	ENSPEMG00000030036	Agtpbp1 (ENSPEMG00000003465)	Naa35 (ENSPEMG00000020283) #16	Golm1 (ENSPEMG00000021119) #17	4921517D22Rik (ENSPEMG00000022165)	ENSPEMG00000025782 ##18	ENSPEMG00000025105 ##18	ENSPEMG00000028848 #18	ENSPEMG00000029941 #19	Tut7 (ENSPEMG00000014030) #20	Gas1 (ENSPEMG00000007789) #21	Dapk1 (ENSPEMG00000022627) #22	BC051665 (ENSPEMG00000025235) #23	Ctsll3 (ENSPEMG00000029464) #24	4930486L24Rik (ENSPEMG00000016874) ##29	ENSPEMG00000022155 ##29	ENSPEMG00000028441 ##29	ENSPEMG00000026019 ##29	ENSPEMG00000030527 ##29	ENSPEMG00000026470	ENSPEMG00000020375	ENSPEMG00000031098	Ctsj (ENSPEMG00000015113) #25	ENSPEMG00000026728 ##29	ENSPEMG00000029752 ##29	Ctsr (ENSPEMG00000001393) #27	Cts6 (ENSPEMG00000016021) #26
Prairie vole	MODERN SPECIES	3	Kif27 (ENSMOCG00000015570) #10	2210016F16Rik (ENSMOCG00000017857) #11	ENSMOCG00000001446 #12	Rmi1 (ENSMOCG00000016761)	Slc28a3 (ENSMOCG00000005269) #13	Ntrk2 (ENSMOCG00000015461) #14	Agtpbp1 (ENSMOCG00000014650)	Naa35 (ENSMOCG00000013999) #16	ENSMOCG00000019507 #17	4921517D22Rik (ENSMOCG00000022999)	ENSMOCG00000000876 ##18	ENSMOCG00000000209 #19	ENSMOCG00000007812 #20	ENSMOCG00000022892 #20	Gas1 (ENSMOCG00000002738) #21	Dapk1 (ENSMOCG00000016789) #22	ENSMOCG00000012620 #23	ENSMOCG00000019948 #23	4930486L24Rik (ENSMOCG00000005874) ##29	Ctsj (ENSMOCG00000013146) #25	ENSMOCG00000000781 ##29	ENSMOCG00000013109 ##29	ENSMOCG00000020961 ##29	Cts8 (ENSMOCG00000005191) #28	Cts7 (ENSMOCG00000001845) #29	ENSMOCG00000010780 ##29	Fbp2 (ENSMOCG00000017815) #30	Fbp1 (ENSMOCG00000014907) #31	Aopep (ENSMOCG00000003056) #32	Fancc (ENSMOCG00000001776) #33	Ptch1 (ENSMOCG00000022943) #34
Murinae	ANCESTRAL SPECIES	21	ENSGT00940000153434.a.a ##12	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b.b ##18	ENSGT00950000183043.a.b.b.a.b.u.a.b.a ##18	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b ##29	ENSGT00390000010930	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b.b #29	ENSGT00940000153321.b.b.l.b.b.a.b ##29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31	ENSGT00940000155211 #32
Mus	ANCESTRAL SPECIES	18	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b.b ##18	ENSGT00950000183043.a.b.b.a.b.u.a.b.a ##18	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00800000125290	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b ##29	ENSGT00390000010930.a	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b.b #29	ENSGT00940000153321.b.b.l.b.b.a.b.a ##29	ENSGT00940000153321.b.b.l.b.b.a.b.b ##29	ENSGT00390000015513.a.a.b #30	ENSGT00390000015513.a.a.a #31
Mus_A	ANCESTRAL SPECIES	14	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b.b ##18	ENSGT00950000183043.a.b.b.a.b.u.a.b.a ##18	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00800000125290	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b ##29	ENSGT00390000010930.b	ENSGT00390000010930.a	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b.b #29	ENSGT00940000153321.b.b.l.b.b.a.b.a ##29	ENSGT00940000153321.b.b.l.b.b.a.b.b ##29	ENSGT00390000015513.a.a.b #30
Mus_B	ANCESTRAL SPECIES	13	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b.b ##18	ENSGT00950000183043.a.b.b.a.b.u.a.b.a ##18	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00800000125290	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##29	ENSGT00390000010930.b	ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##29	ENSGT00390000010930.a	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b.b #29	ENSGT00940000153321.b.b.l.b.b.a.b.a ##29	ENSGT00940000153321.b.b.l.b.b.a.b.b ##29
Mus_C	ANCESTRAL SPECIES	10	ENSGT00940000161055	ENSGT00390000016025.a #13	ENSGT00940000155181 #14	ENSGT00940000157707	ENSGT00390000002445 #16	ENSGT00530000063675.b #17	ENSGT00940000164141	ENSGT00950000183043.a.b.b.a.b.u.a.b.b ##18	ENSGT00950000183043.a.b.b.a.b.u.a.b.a ##18	ENSGT00950000183043.a.b.b.a.b.u.b ##18	ENSGT00950000183043.a.b.b.a.a.a.b #18	ENSGT00490000043385 #19	ENSGT00940000156859 #20	ENSGT00390000001195.a #21	ENSGT00800000125290	ENSGT00940000153424.a.b #22	ENSGT00940000153321.b.b.l.b.a.a.a.b #23	ENSGT00940000153321.b.b.l.b.a.a.a.a #24	ENSGT00940000153321.b.b.l.b.a.b ##29	ENSGT00940000153321.b.b.l.b.b.b.b.b.c ##29	ENSGT00390000010930.b	ENSGT00940000153321.b.b.l.b.b.b.b.b.d ##29	ENSGT00390000010930.a	ENSGT00940000153321.b.b.l.b.b.b.b.a #25	ENSGT00940000153321.b.b.l.b.b.b.a.b.e ##29	ENSGT00940000153321.b.b.l.b.b.b.a.a.a #27	ENSGT00940000153321.b.b.l.b.b.b.a.a.b #26	ENSGT00940000153321.b.b.l.b.b.a.a.a #28	ENSGT00940000153321.b.b.l.b.b.a.a.b.b #29	ENSGT00940000153321.b.b.l.b.b.a.b.a ##29	ENSGT00940000153321.b.b.l.b.b.a.b.b ##29
spretus	MODERN SPECIES	4	Hnrnpk (MGP_SPRETEiJ_G0019479) ##12	Rmi1 (MGP_SPRETEiJ_G0019480)	Slc28a3 (MGP_SPRETEiJ_G0019481) #13	Ntrk2 (MGP_SPRETEiJ_G0019482) #14	Agtpbp1 (MGP_SPRETEiJ_G0019483)	Naa35 (MGP_SPRETEiJ_G0019484) #16	MGP_SPRETEiJ_G0019485 #17	4921517D22Rik (MGP_SPRETEiJ_G0019486)	Spata31d1a (MGP_SPRETEiJ_G0019487) ##18	Spata31d1d (MGP_SPRETEiJ_G0019488) ##18	1700014D04Rik (MGP_SPRETEiJ_G0019489) #18	MGP_SPRETEiJ_G0019490 #19	Tut7 (MGP_SPRETEiJ_G0019491) #20	Gas1 (MGP_SPRETEiJ_G0019492) #21	MGP_SPRETEiJ_G0019493	Dapk1 (MGP_SPRETEiJ_G0019494) #22	BC051665 (MGP_SPRETEiJ_G0019495) #23	Ctsll3 (MGP_SPRETEiJ_G0019496) #24	4930486L24Rik (MGP_SPRETEiJ_G0019497) ##29	Ctla2b (MGP_SPRETEiJ_G0019498) ##29	Tpbpb (MGP_SPRETEiJ_G0019499)	Ctla2a (MGP_SPRETEiJ_G0019500) ##29	MGP_SPRETEiJ_G0019501	Ctsj (MGP_SPRETEiJ_G0019502) #25	Ctsq (MGP_SPRETEiJ_G0019503) ##29	Ctsr (MGP_SPRETEiJ_G0019504) #27	Cts6 (MGP_SPRETEiJ_G0019505) #26	Cts8 (MGP_SPRETEiJ_G0019506) #28	Cts7 (MGP_SPRETEiJ_G0019507) #29	Ctsm (MGP_SPRETEiJ_G0019508) ##29	MGP_SPRETEiJ_G0019509 ##29
Steppe mouse	MODERN SPECIES	3363	ENSMSIG00000020732	Ntrk2 (ENSMSIG00000020750) #14	Agtpbp1 (ENSMSIG00000021104)	Naa35 (ENSMSIG00000021291) #16	Golm1 (ENSMSIG00000021316) #17	4921517D22Rik (ENSMSIG00000021349)	Spata31d1a (ENSMSIG00000021365) ##18	Spata31d1b (ENSMSIG00000021379) ##18	Spata31d1d (ENSMSIG00000021387) ##18	1700014D04Rik (ENSMSIG00000021396) #18	ENSMSIG00000021410 #19	Tut7 (ENSMSIG00000021435) #20	Gas1 (ENSMSIG00000021556) #21	ENSMSIG00000021571	ENSMSIG00000021574	Dapk1 (ENSMSIG00000021579) #22	BC051665 (ENSMSIG00000021609) #23	Ctsll3 (ENSMSIG00000021625) #24	4930486L24Rik (ENSMSIG00000021647) ##29	Ctla2b (ENSMSIG00000021665) ##29	Tpbpb (ENSMSIG00000021690)	Ctla2a (ENSMSIG00000021719) ##29	Tpbpa (ENSMSIG00000021726)	Ctsj (ENSMSIG00000021739) #25
Mouse	MODERN SPECIES	4	Hnrnpk (ENSMUSG00000021546) ##12	Rmi1 (ENSMUSG00000035367)	Slc28a3 (ENSMUSG00000021553) #13	Ntrk2 (ENSMUSG00000055254) #14	Agtpbp1 (ENSMUSG00000021557)	Naa35 (ENSMUSG00000021555) #16	Golm1 (ENSMUSG00000021556) #17	4921517D22Rik (ENSMUSG00000049902)	Spata31d1a (ENSMUSG00000050876) ##18	Spata31d1b (ENSMUSG00000091311) ##18	Spata31d1d (ENSMUSG00000043986) ##18	1700014D04Rik (ENSMUSG00000051054) #18	Isca1 (ENSMUSG00000044792) #19	Tut7 (ENSMUSG00000035248) #20	Gas1 (ENSMUSG00000052957) #21	Dapk1 (ENSMUSG00000021559) #22	BC051665 (ENSMUSG00000042243) #23	Ctsll3 (ENSMUSG00000056728) #24	4930486L24Rik (ENSMUSG00000050345) ##29	Ctla2b (ENSMUSG00000074874) ##29	Gm49391 (ENSMUSG00000114432)	Tpbpb (ENSMUSG00000062705)	Ctla2a (ENSMUSG00000044258) ##29	Tpbpa (ENSMUSG00000033834)	Ctsj (ENSMUSG00000055298) #25	Ctsq (ENSMUSG00000021439) ##29	Ctsr (ENSMUSG00000055679) #27	Cts6 (ENSMUSG00000021441) #26	Cts8 (ENSMUSG00000057446) #28	Cts7 (ENSMUSG00000021440) #29	Ctsm (ENSMUSG00000074871) ##29
Ryukyu mouse	MODERN SPECIES	4	Rmi1 (MGP_CAROLIEiJ_G0018600)	Slc28a3 (MGP_CAROLIEiJ_G0018601) #13	Ntrk2 (MGP_CAROLIEiJ_G0018602) #14	Agtpbp1 (MGP_CAROLIEiJ_G0018603)	MGP_CAROLIEiJ_G0018604 #16	Golm1 (MGP_CAROLIEiJ_G0018605) #17	4921517D22Rik (MGP_CAROLIEiJ_G0018606)	MGP_CAROLIEiJ_G0018607 ##18	MGP_CAROLIEiJ_G0018608 ##18	Spata31d1d (MGP_CAROLIEiJ_G0018609) ##18	1700014D04Rik (MGP_CAROLIEiJ_G0018610) #18	MGP_CAROLIEiJ_G0018611 #19	Tut7 (MGP_CAROLIEiJ_G0018612) #20	Gas1 (MGP_CAROLIEiJ_G0018613) #21	MGP_CAROLIEiJ_G0018614	Dapk1 (MGP_CAROLIEiJ_G0018615) #22	BC051665 (MGP_CAROLIEiJ_G0018616) #23	Ctsll3 (MGP_CAROLIEiJ_G0018617) #24	4930486L24Rik (MGP_CAROLIEiJ_G0018618) ##29	MGP_CAROLIEiJ_G0018619 ##29	MGP_CAROLIEiJ_G0018620 ##29	Tpbpb (MGP_CAROLIEiJ_G0018621)	MGP_CAROLIEiJ_G0018622	Ctsj (MGP_CAROLIEiJ_G0018623) #25	Ctsr (MGP_CAROLIEiJ_G0018624) #27	Cts6 (MGP_CAROLIEiJ_G0018625) #26	Cts8 (MGP_CAROLIEiJ_G0018626) #28	Cts7 (MGP_CAROLIEiJ_G0018627) #29	Ctsm (MGP_CAROLIEiJ_G0018628) ##29	MGP_CAROLIEiJ_G0018629 ##29	Fbp2 (MGP_CAROLIEiJ_G0018630) #30
Shrew mouse	MODERN SPECIES	7	Rmi1 (MGP_PahariEiJ_G0019664)	Slc28a3 (MGP_PahariEiJ_G0019665) #13	Ntrk2 (MGP_PahariEiJ_G0019666) #14	Agtpbp1 (MGP_PahariEiJ_G0019667)	Naa35 (MGP_PahariEiJ_G0019668) #16	Golm1 (MGP_PahariEiJ_G0019669) #17	4921517D22Rik (MGP_PahariEiJ_G0019670)	MGP_PahariEiJ_G0019671 ##18	Spata31d1b (MGP_PahariEiJ_G0019672) ##18	Spata31d1d (MGP_PahariEiJ_G0019673) ##18	1700014D04Rik (MGP_PahariEiJ_G0019674) #18	MGP_PahariEiJ_G0019675 #19	Tut7 (MGP_PahariEiJ_G0019676) #20	Gas1 (MGP_PahariEiJ_G0019677) #21	MGP_PahariEiJ_G0019678	Dapk1 (MGP_PahariEiJ_G0019679) #22	BC051665 (MGP_PahariEiJ_G0019680) #23	Ctsll3 (MGP_PahariEiJ_G0019681) #24	4930486L24Rik (MGP_PahariEiJ_G0019682) ##29	MGP_PahariEiJ_G0019683 ##29	MGP_PahariEiJ_G0019684 ##29	MGP_PahariEiJ_G0019685	MGP_PahariEiJ_G0019686	Ctsj (MGP_PahariEiJ_G0019687) #25	Ctsr (MGP_PahariEiJ_G0019688) #27	Cts6 (MGP_PahariEiJ_G0019689) #26	Cts8 (MGP_PahariEiJ_G0019690) #28	Cts7 (MGP_PahariEiJ_G0019691) #29	MGP_PahariEiJ_G0019692 ##29	MGP_PahariEiJ_G0019693 ##29	Fbp2 (MGP_PahariEiJ_G0019694) #30
Rat	MODERN SPECIES	8	Hnrnpk (ENSRNOG00000019113) ##12	Rmi1 (ENSRNOG00000019108)	Slc28a3 (ENSRNOG00000018853) #13	Ntrk2 (ENSRNOG00000018839) #14	Agtpbp1 (ENSRNOG00000018651)	ENSRNOG00000064986	Naa35 (ENSRNOG00000018417) #16	Golm1 (ENSRNOG00000018400) #17	LOC100912252 (ENSRNOG00000042206)	Spata31d3 (ENSRNOG00000056413) ##18	Spata31d1b (ENSRNOG00000069288) ##18	Spata31d1 (ENSRNOG00000027014) ##18	AABR07026929.1 (ENSRNOG00000042026) #18	Isca1 (ENSRNOG00000018343) #19	Tut7 (ENSRNOG00000016629) #20	Dapk1 (ENSRNOG00000018198) #22	RGD1308751 (ENSRNOG00000039954) #23	Ctsll3 (ENSRNOG00000069877) #24	Testin (ENSRNOG00000018028) ##29	Ctla2a (ENSRNOG00000039971) ##29	Tpbpa (ENSRNOG00000039975)	RGD1564827 (ENSRNOG00000069712) ##29	Ctsj (ENSRNOG00000046476) #25	Ctsql2 (ENSRNOG00000017946) ##29	LOC100364523 (ENSRNOG00000056519) ##29	Ctsq (ENSRNOG00000048693) ##29	AABR07043347.1 (ENSRNOG00000051410)	MGC114246 (ENSRNOG00000039990) #27	Ctsr (ENSRNOG00000017888) #26	Cts8 (ENSRNOG00000040000) #28	Cts8l1 (ENSRNOG00000065532) #28
Upper Galilee mountains blind mole rat	MODERN SPECIES	827											ENSNGAG00000022920 #19	ENSNGAG00000022758 #20	ENSNGAG00000021770 #20	ENSNGAG00000012268 #20	ENSNGAG00000016586	Dapk1 (ENSNGAG00000023610) #22	ENSNGAG00000023296 #24	ENSNGAG00000023443 #24	ENSNGAG00000001073 #29	ENSNGAG00000006724 #29	ENSNGAG00000010869 #17	Naa35 (ENSNGAG00000012706) #16
Lesser Egyptian jerboa	MODERN SPECIES	231									ENSJJAG00000021479	ENSJJAG00000021622 #19	ENSJJAG00000000106 #20	ENSJJAG00000000283 #20	ENSJJAG00000000397 #20	ENSJJAG00000000580	ENSJJAG00000000674	Dapk1 (ENSJJAG00000005305) #22
Kangaroo rat	MODERN SPECIES	462	Pom121 (ENSDORG00000010532)	Nsun5 (ENSDORG00000010530)	Trim50 (ENSDORG00000015388)	ENSDORG00000015387	Fzd9 (ENSDORG00000012533)	Baz1b (ENSDORG00000012540)	ENSDORG00000026621	Tbl2 (ENSDORG00000012166)	Mlxipl (ENSDORG00000012167)	ENSDORG00000024551 #19	ENSDORG00000009046 #20	ENSDORG00000026356 #20	ENSDORG00000028702 #20	Gas1 (ENSDORG00000011479) #21	ENSDORG00000027295	Dapk1 (ENSDORG00000003214) #22