Gnathostomata ANCESTRAL SPECIES 593 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00440000037606 #29 Euteleostomi ANCESTRAL SPECIES 107 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.B #21 ENSGT00530000063873.A #20 ENSGT00940000156552 #19 ENSGT00940000156089 #18 ENSGT00940000176171 Sarcopterygii ANCESTRAL SPECIES 293 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 Tetrapoda ANCESTRAL SPECIES 6 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b Amniota ANCESTRAL SPECIES 6 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Mammalia ANCESTRAL SPECIES 6 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Theria ANCESTRAL SPECIES 5 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Eutheria ANCESTRAL SPECIES 10 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000153534.A #9 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT01090000260046 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Primates ANCESTRAL SPECIES 13 ENSGT00940000154319.u.b ##8 ENSGT00940000153534.A #9 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Strepsirrhini ANCESTRAL SPECIES 10 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Bushbaby MODERN SPECIES 128 ENSOGAG00000008508 #7 ENSOGAG00000030345 #8 NOP58 (ENSOGAG00000003906) #9 BMPR2 (ENSOGAG00000007765) #10 FAM117B (ENSOGAG00000001497) #11 ICA1L (ENSOGAG00000001500) #12 WDR12 (ENSOGAG00000006573) #13 CARF (ENSOGAG00000032187) #14 NBEAL1 (ENSOGAG00000015089) #15 CYP20A1 (ENSOGAG00000015164) #16 ENSOGAG00000033059 #17 ABI2 (ENSOGAG00000011602) #18 RAPH1 (ENSOGAG00000015099) #19 CD28 (ENSOGAG00000012567) #20 CTLA4 (ENSOGAG00000002578) #21 PARD3B (ENSOGAG00000007396) #22 NRP2 (ENSOGAG00000007405) #23 INO80D (ENSOGAG00000005756) #24 NDUFS1 (ENSOGAG00000011226) #25 EEF1B2 (ENSOGAG00000011229) #26 CMKLR2 (ENSOGAG00000011232) #27 ENSOGAG00000031172 #28 ZDBF2 (ENSOGAG00000016996) #29 ENSOGAG00000031644 #30 ADAM23 (ENSOGAG00000016997) #31 DYTN (ENSOGAG00000027434) #32 MDH1B (ENSOGAG00000017006) #33 FASTKD2 (ENSOGAG00000017008) #34 CPO (ENSOGAG00000017012) #35 KLF7 (ENSOGAG00000017014) #36 CREB1 (ENSOGAG00000007121) #37 Lemuriformes ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Lemuriformes_a ANCESTRAL SPECIES 15 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00390000001413.b ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Coquerels sifaka MODERN SPECIES 847 PARD3B (ENSPCOG00000018611) #22 NRP2 (ENSPCOG00000020112) #23 INO80D (ENSPCOG00000024934) #24 ENSPCOG00000018961 #25 EEF1B2 (ENSPCOG00000016289) #26 ENSPCOG00000013632 ZDBF2 (ENSPCOG00000019226) #29 ADAM23 (ENSPCOG00000023473) #31 FAM237A (ENSPCOG00000018015) DYTN (ENSPCOG00000020018) #32 MDH1B (ENSPCOG00000017083) #33 FASTKD2 (ENSPCOG00000028714) #34 CPO (ENSPCOG00000028646) #35 KLF7 (ENSPCOG00000018231) #36 CREB1 (ENSPCOG00000021255) #37 METTL21A (ENSPCOG00000018442) Greater bamboo lemur MODERN SPECIES 388 CD28 (ENSPSMG00000022341) #20 ENSPSMG00000022328 CTLA4 (ENSPSMG00000022319) #21 ICOS (ENSPSMG00000022309) PARD3B (ENSPSMG00000022181) #22 NRP2 (ENSPSMG00000021719) #23 INO80D (ENSPSMG00000021497) #24 NDUFS1 (ENSPSMG00000021383) #25 EEF1B2 (ENSPSMG00000021215) #26 CMKLR2 (ENSPSMG00000021198) #27 Mouse lemur MODERN SPECIES 30 ENSMICG00000031997 FAM117B (ENSMICG00000042296) #11 SLC16A14 (ENSMICG00000010609) FBXO36 (ENSMICG00000034045) ICA1L (ENSMICG00000002701) #12 ENSMICG00000044580 #13 CARF (ENSMICG00000011943) #14 ENSMICG00000026752 NBEAL1 (ENSMICG00000003736) #15 CYP20A1 (ENSMICG00000010806) #16 ABI2 (ENSMICG00000048062) #18 RAPH1 (ENSMICG00000001085) #19 CD28 (ENSMICG00000044645) #20 CTLA4 (ENSMICG00000032206) #21 ICOS (ENSMICG00000037046) PARD3B (ENSMICG00000009358) #22 NRP2 (ENSMICG00000009376) #23 ENSMICG00000044290 INO80D (ENSMICG00000010590) #24 NDUFS1 (ENSMICG00000010601) #25 EEF1B2 (ENSMICG00000047922) #26 ZDBF2 (ENSMICG00000044925) #29 ADAM23 (ENSMICG00000009477) #31 FAM237A (ENSMICG00000044768) DYTN (ENSMICG00000027944) #32 MDH1B (ENSMICG00000009487) #33 FASTKD2 (ENSMICG00000026515) #34 CPO (ENSMICG00000015370) #35 KLF7 (ENSMICG00000037405) #36 CREB1 (ENSMICG00000009731) #37 METTL21A (ENSMICG00000009739) Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000154319.u.b ##8 ENSGT00940000153534.A #9 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Tarsier MODERN SPECIES 5866 PARD3B (ENSTSYG00000000288) #22 Simiiformes ANCESTRAL SPECIES 15 ENSGT00940000154319.u.b ##8 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 ENSGT00940000155408 #37 ENSGT00940000157249 Platyrrhini ANCESTRAL SPECIES 9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000000685.o.b.a ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00390000001455.`b.a ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.b.b ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.a #36 ENSGT00940000155408 #37 Cebidae ANCESTRAL SPECIES 11 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000000685.o.b.a ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00390000001455.`b.a ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.b.b.a ##26 ENSGT00940000160642 #27 ENSGT00950000183014.f.a.g.b.b.b.b ##26 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.a #36 Marmoset MODERN SPECIES 18 ENSCJAG00000047154 ##8 NOP58 (ENSCJAG00000004985) #9 BMPR2 (ENSCJAG00000005066) #10 FAM117B (ENSCJAG00000047724) #11 ICA1L (ENSCJAG00000005162) #12 WDR12 (ENSCJAG00000005171) #13 CARF (ENSCJAG00000005224) #14 NBEAL1 (ENSCJAG00000031696) #15 ENSCJAG00000081284 CYP20A1 (ENSCJAG00000039360) #16 ABI2 (ENSCJAG00000005399) #18 RAPH1 (ENSCJAG00000005339) #19 CD28 (ENSCJAG00000042321) #20 CTLA4 (ENSCJAG00000005495) #21 ICOS (ENSCJAG00000005516) PARD3B (ENSCJAG00000005521) #22 ENSCJAG00000076910 NRP2 (ENSCJAG00000005577) #23 ENSCJAG00000045767 INO80D (ENSCJAG00000005682) #24 NDUFS1 (ENSCJAG00000005725) #25 ENSCJAG00000005805 ##26 CMKLR2 (ENSCJAG00000077852) #27 ENSCJAG00000079037 ENSCJAG00000085853 ZDBF2 (ENSCJAG00000005812) #29 ADAM23 (ENSCJAG00000005821) #31 DYTN (ENSCJAG00000005926) #32 MDH1B (ENSCJAG00000005953) #33 FASTKD2 (ENSCJAG00000005971) #34 ENSCJAG00000073541 Cebidae_a ANCESTRAL SPECIES 16 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00390000010308.cb.b ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000000685.o.b.a ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00390000001455.`b.a ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.b.b.a ##26 ENSGT00950000183014.f.a.g.b.b.b.b ##26 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.a #36 ENSGT00940000155408 #37 Capuchin MODERN SPECIES 101 BMPR2 (ENSCCAG00000025039) #10 ENSCCAG00000026090 FAM117B (ENSCCAG00000031732) #11 ICA1L (ENSCCAG00000027883) #12 WDR12 (ENSCCAG00000005461) #13 CARF (ENSCCAG00000019881) #14 NBEAL1 (ENSCCAG00000021158) #15 ENSCCAG00000031449 CYP20A1 (ENSCCAG00000036341) #16 ABI2 (ENSCCAG00000027705) #18 RAPH1 (ENSCCAG00000029188) #19 ENSCCAG00000031812 CD28 (ENSCCAG00000035864) #20 CTLA4 (ENSCCAG00000029978) #21 ICOS (ENSCCAG00000019210) PARD3B (ENSCCAG00000034949) #22 NRP2 (ENSCCAG00000026361) #23 ENSCCAG00000029458 LSM5 (ENSCCAG00000032792) INO80D (ENSCCAG00000028441) #24 NDUFS1 (ENSCCAG00000021875) #25 ENSCCAG00000033644 ##26 ENSCCAG00000029547 ZDBF2 (ENSCCAG00000026606) #29 ADAM23 (ENSCCAG00000031476) #31 FAM237A (ENSCCAG00000025434) DYTN (ENSCCAG00000036386) #32 Bolivian squirrel monkey MODERN SPECIES 56 BMPR2 (ENSSBOG00000025318) #10 ENSSBOG00000016073 #11 ICA1L (ENSSBOG00000032973) #12 WDR12 (ENSSBOG00000015132) #13 CARF (ENSSBOG00000032523) #14 NBEAL1 (ENSSBOG00000032563) #15 ENSSBOG00000030482 CYP20A1 (ENSSBOG00000025384) #16 ABI2 (ENSSBOG00000031443) #18 RAPH1 (ENSSBOG00000036069) #19 ENSSBOG00000030839 CD28 (ENSSBOG00000032327) #20 ENSSBOG00000030167 CTLA4 (ENSSBOG00000034817) #21 ICOS (ENSSBOG00000000744) PARD3B (ENSSBOG00000029267) #22 NRP2 (ENSSBOG00000035290) #23 ENSSBOG00000034794 INO80D (ENSSBOG00000020878) #24 NDUFS1 (ENSSBOG00000028426) #25 ENSSBOG00000036258 ##26 ZDBF2 (ENSSBOG00000011111) #29 ADAM23 (ENSSBOG00000001918) #31 FAM237A (ENSSBOG00000033809) DYTN (ENSSBOG00000026100) #32 MDH1B (ENSSBOG00000029880) #33 FASTKD2 (ENSSBOG00000029513) #34 CPO (ENSSBOG00000030310) #35 ENSSBOG00000027628 #36 ENSSBOG00000018885 CREB1 (ENSSBOG00000034085) #37 Mas night monkey MODERN SPECIES 357 ENSANAG00000029164 FAM117B (ENSANAG00000032237) #11 ICA1L (ENSANAG00000036249) #12 WDR12 (ENSANAG00000030065) #13 CARF (ENSANAG00000032508) #14 NBEAL1 (ENSANAG00000029269) #15 ENSANAG00000023562 CYP20A1 (ENSANAG00000026608) #16 ABI2 (ENSANAG00000037183) #18 RAPH1 (ENSANAG00000037926) #19 CD28 (ENSANAG00000027528) #20 CTLA4 (ENSANAG00000027709) #21 ICOS (ENSANAG00000027294) ENSANAG00000037162 ENSANAG00000037079 PARD3B (ENSANAG00000024698) #22 NRP2 (ENSANAG00000033490) #23 ENSANAG00000037758 INO80D (ENSANAG00000029568) #24 NDUFS1 (ENSANAG00000020079) #25 ENSANAG00000024356 ##26 ZDBF2 (ENSANAG00000020305) #29 ADAM23 (ENSANAG00000035087) #31 FAM237A (ENSANAG00000024386) DYTN (ENSANAG00000031986) #32 MDH1B (ENSANAG00000008683) #33 FASTKD2 (ENSANAG00000034550) #34 CPO (ENSANAG00000023194) #35 KLF7 (ENSANAG00000036279) #36 CREB1 (ENSANAG00000025888) #37 ENSANAG00000020586 Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Cercopithecidae ANCESTRAL SPECIES 13 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Cercopithecinae ANCESTRAL SPECIES 11 ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 ENSGT00940000155408 #37 Vervet Monkey MODERN SPECIES 1 ENSCSAG00000010504 NOP58 (ENSCSAG00000010496) #9 BMPR2 (ENSCSAG00000010485) #10 FAM117B (ENSCSAG00000010474) #11 ICA1L (ENSCSAG00000010466) #12 ENSCSAG00000010442 #13 CARF (ENSCSAG00000010380) #14 NBEAL1 (ENSCSAG00000010364) #15 CYP20A1 (ENSCSAG00000010341) #16 ABI2 (ENSCSAG00000010327) #18 RAPH1 (ENSCSAG00000010318) #19 CD28 (ENSCSAG00000010308) #20 ENSCSAG00000010293 CTLA4 (ENSCSAG00000010288) #21 ICOS (ENSCSAG00000010281) PARD3B (ENSCSAG00000010270) #22 NRP2 (ENSCSAG00000010258) #23 INO80D (ENSCSAG00000010251) #24 NDUFS1 (ENSCSAG00000010247) #25 ENSCSAG00000010238 #26 CMKLR2 (ENSCSAG00000018769) #27 ZDBF2 (ENSCSAG00000010233) #29 ENSCSAG00000010220 ##30 ADAM23 (ENSCSAG00000010198) #31 DYTN (ENSCSAG00000010181) #32 MDH1B (ENSCSAG00000010163) #33 FASTKD2 (ENSCSAG00000010158) #34 CPO (ENSCSAG00000010143) #35 KLF7 (ENSCSAG00000010117) #36 CREB1 (ENSCSAG00000010111) #37 METTL21A (ENSCSAG00000010107) Cercopithecinae_a ANCESTRAL SPECIES 16 ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Cercopithecinae_b ANCESTRAL SPECIES 10 ENSGT00390000000685.o.a ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Cercopithecinae_d ANCESTRAL SPECIES ENSGT00390000000685.o.a ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Sooty mangabey MODERN SPECIES 570 NOP58 (ENSCATG00000037684) #9 BMPR2 (ENSCATG00000033192) #10 ENSCATG00000033526 FAM117B (ENSCATG00000033570) #11 ICA1L (ENSCATG00000036911) #12 ENSCATG00000035496 #13 CARF (ENSCATG00000035061) #14 NBEAL1 (ENSCATG00000036478) #15 CYP20A1 (ENSCATG00000034415) #16 ABI2 (ENSCATG00000038300) #18 RAPH1 (ENSCATG00000044686) #19 ENSCATG00000043923 CD28 (ENSCATG00000043017) #20 CTLA4 (ENSCATG00000036235) #21 ICOS (ENSCATG00000043591) PARD3B (ENSCATG00000022284) #22 NRP2 (ENSCATG00000032051) #23 INO80D (ENSCATG00000044654) #24 NDUFS1 (ENSCATG00000037259) #25 ENSCATG00000037736 ##26 ZDBF2 (ENSCATG00000037091) #29 ENSCATG00000037624 ADAM23 (ENSCATG00000043626) #31 FAM237A (ENSCATG00000036777) DYTN (ENSCATG00000035275) #32 MDH1B (ENSCATG00000035467) #33 FASTKD2 (ENSCATG00000038647) #34 CPO (ENSCATG00000043384) #35 KLF7 (ENSCATG00000041615) #36 CREB1 (ENSCATG00000037133) #37 METTL21A (ENSCATG00000041598) Drill MODERN SPECIES 1089 NBEAL1 (ENSMLEG00000032708) #15 CYP20A1 (ENSMLEG00000034377) #16 ABI2 (ENSMLEG00000040577) #18 RAPH1 (ENSMLEG00000033969) #19 ENSMLEG00000004995 CD28 (ENSMLEG00000037603) #20 CTLA4 (ENSMLEG00000037639) #21 ICOS (ENSMLEG00000007807) PARD3B (ENSMLEG00000031270) #22 ENSMLEG00000040986 NRP2 (ENSMLEG00000035732) #23 INO80D (ENSMLEG00000039669) #24 Olive baboon MODERN SPECIES 1 NOP58 (ENSPANG00000005211) #9 BMPR2 (ENSPANG00000006512) #10 ENSPANG00000042529 FAM117B (ENSPANG00000009087) #11 ICA1L (ENSPANG00000017467) #12 ENSPANG00000008983 #13 ENSPANG00000008982 #14 NBEAL1 (ENSPANG00000000692) #15 CYP20A1 (ENSPANG00000002439) #16 ABI2 (ENSPANG00000023238) #18 RAPH1 (ENSPANG00000018186) #19 CD28 (ENSPANG00000011488) #20 CTLA4 (ENSPANG00000007100) #21 ICOS (ENSPANG00000010251) ENSPANG00000042490 PARD3B (ENSPANG00000017315) #22 NRP2 (ENSPANG00000011487) #23 INO80D (ENSPANG00000005753) #24 NDUFS1 (ENSPANG00000019101) #25 ENSPANG00000011248 ##26 CMKLR2 (ENSPANG00000007301) #27 ZDBF2 (ENSPANG00000023236) #29 ENSPANG00000032033 ADAM23 (ENSPANG00000025872) #31 FAM237A (ENSPANG00000032174) DYTN (ENSPANG00000011028) #32 MDH1B (ENSPANG00000022792) #33 ENSPANG00000043039 FASTKD2 (ENSPANG00000012835) #34 CPO (ENSPANG00000005004) #35 KLF7 (ENSPANG00000005240) #36 Macaca ANCESTRAL SPECIES 15 ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552.b #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a.b ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00950000182810.A.a.a.lb.d ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Macaca_a ANCESTRAL SPECIES 17 ENSGT00390000000685.o.a ENSGT00940000154319.u.b.a.b ##8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552.b #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 ENSGT00940000155408 #37 ENSGT00940000157249 Rhesus MODERN SPECIES 3 ENSMMUG00000061021 BMPR2 (ENSMMUG00000009009) #10 FAM117B (ENSMMUG00000021152) #11 ICA1L (ENSMMUG00000017364) #12 ENSMMUG00000059397 WDR12 (ENSMMUG00000043068) #13 CARF (ENSMMUG00000006418) #14 NBEAL1 (ENSMMUG00000006420) #15 CYP20A1 (ENSMMUG00000005971) #16 ABI2 (ENSMMUG00000000312) #18 RAPH1 (ENSMMUG00000000314) #19 CD28 (ENSMMUG00000057214) #20 CTLA4 (ENSMMUG00000015903) #21 ICOS (ENSMMUG00000002648) ENSMMUG00000052080 PARD3B (ENSMMUG00000014814) #22 ENSMMUG00000055410 NRP2 (ENSMMUG00000020052) #23 INO80D (ENSMMUG00000001053) #24 ENSMMUG00000054550 NDUFS1 (ENSMMUG00000016788) #25 EEF1B2 (ENSMMUG00000001054) ##26 CMKLR2 (ENSMMUG00000008334) #27 ZDBF2 (ENSMMUG00000031276) #29 ADAM23 (ENSMMUG00000011641) #31 FAM237A (ENSMMUG00000052987) DYTN (ENSMMUG00000048288) #32 MDH1B (ENSMMUG00000017734) #33 FASTKD2 (ENSMMUG00000017735) #34 CPO (ENSMMUG00000063052) #35 ENSMMUG00000051957 #36 Crab-eating macaque MODERN SPECIES 3 ICA1L (ENSMFAG00000046002) #12 ENSMFAG00000055750 ENSMFAG00000048371 ENSMFAG00000044326 #13 CARF (ENSMFAG00000042636) #14 NBEAL1 (ENSMFAG00000032529) #15 ENSMFAG00000065796 CYP20A1 (ENSMFAG00000036924) #16 ENSMFAG00000048556 ABI2 (ENSMFAG00000031286) #18 ENSMFAG00000003148 #19 ENSMFAG00000062324 #19 CD28 (ENSMFAG00000003864) #20 CTLA4 (ENSMFAG00000004047) #21 ICOS (ENSMFAG00000053159) PARD3B (ENSMFAG00000043904) #22 NRP2 (ENSMFAG00000038385) #23 ENSMFAG00000053377 INO80D (ENSMFAG00000001629) #24 NDUFS1 (ENSMFAG00000039201) #25 ENSMFAG00000038364 ##26 CMKLR2 (ENSMFAG00000013528) #27 ZDBF2 (ENSMFAG00000044616) #29 ADAM23 (ENSMFAG00000030094) #31 FAM237A (ENSMFAG00000031105) DYTN (ENSMFAG00000044098) #32 MDH1B (ENSMFAG00000035811) #33 ENSMFAG00000049460 FASTKD2 (ENSMFAG00000033471) #34 CPO (ENSMFAG00000062349) #35 KLF7 (ENSMFAG00000039083) #36 Pig-tailed macaque MODERN SPECIES 409 NOP58 (ENSMNEG00000012760) #9 BMPR2 (ENSMNEG00000032368) #10 FAM117B (ENSMNEG00000033073) #11 ICA1L (ENSMNEG00000039428) #12 ENSMNEG00000027411 #13 CARF (ENSMNEG00000033105) #14 NBEAL1 (ENSMNEG00000044041) #15 CYP20A1 (ENSMNEG00000045164) #16 ABI2 (ENSMNEG00000028519) #18 RAPH1 (ENSMNEG00000030823) #19 ENSMNEG00000036304 CD28 (ENSMNEG00000033642) #20 ENSMNEG00000030427 CTLA4 (ENSMNEG00000043834) #21 ICOS (ENSMNEG00000029598) PARD3B (ENSMNEG00000040103) #22 ENSMNEG00000031020 NRP2 (ENSMNEG00000039082) #23 INO80D (ENSMNEG00000032459) #24 NDUFS1 (ENSMNEG00000032822) #25 ENSMNEG00000030060 ##26 ZDBF2 (ENSMNEG00000031863) #29 ENSMNEG00000028225 ADAM23 (ENSMNEG00000027959) #31 FAM237A (ENSMNEG00000032870) DYTN (ENSMNEG00000038040) #32 MDH1B (ENSMNEG00000043559) #33 FASTKD2 (ENSMNEG00000043091) #34 CPO (ENSMNEG00000008835) #35 KLF7 (ENSMNEG00000027996) #36 CREB1 (ENSMNEG00000030274) #37 Rhinopithecus ANCESTRAL SPECIES 73 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.a ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.a.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b.c #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 ENSGT00940000155408 #37 Golden snub-nosed monkey MODERN SPECIES 2758 CARF (ENSRROG00000045180) #14 NBEAL1 (ENSRROG00000015491) #15 CYP20A1 (ENSRROG00000040044) #16 ABI2 (ENSRROG00000040959) #18 RAPH1 (ENSRROG00000010278) #19 ENSRROG00000006311 ENSRROG00000034411 CD28 (ENSRROG00000043826) #20 ENSRROG00000034095 CTLA4 (ENSRROG00000028565) #21 ICOS (ENSRROG00000038288) PARD3B (ENSRROG00000013717) #22 NRP2 (ENSRROG00000040911) #23 INO80D (ENSRROG00000003571) #24 NDUFS1 (ENSRROG00000033953) #25 ENSRROG00000041925 ##26 CMKLR2 (ENSRROG00000015659) #27 ENSRROG00000038360 ZDBF2 (ENSRROG00000032109) #29 ADAM23 (ENSRROG00000036437) #31 Black snub-nosed monkey MODERN SPECIES 1164 PARD3B (ENSRBIG00000039853) #22 NRP2 (ENSRBIG00000035417) #23 INO80D (ENSRBIG00000044868) #24 NDUFS1 (ENSRBIG00000020611) #25 ENSRBIG00000040112 ##26 ENSRBIG00000031452 ZDBF2 (ENSRBIG00000033928) #29 ADAM23 (ENSRBIG00000032092) #31 FAM237A (ENSRBIG00000033114) DYTN (ENSRBIG00000028505) #32 ENSRBIG00000025761 #33 FASTKD2 (ENSRBIG00000039778) #34 CPO (ENSRBIG00000037719) #35 KLF7 (ENSRBIG00000040855) #36 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.a.b ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Hominidae ANCESTRAL SPECIES 17 ENSGT00940000153534.A #9 ENSGT00390000008128.c.a.a ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.a.b ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.a.b.a.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.a.b.a.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Pan ANCESTRAL SPECIES 12 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00610000087446 ENSGT00390000015889.j ENSGT00390000005530.a.a #12 ENSGT00930000150950.b.m.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153052.c.b.a.a.a.a.a.a.a.d ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.a.b.a.a ##26 ENSGT00940000160642 #27 ENSGT00390000015060.n ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235.g.b #36 Bonobo MODERN SPECIES 15 ENSPPAG00000043823 BMPR2 (ENSPPAG00000017269) #10 FAM117B (ENSPPAG00000041596) #11 ENSPPAG00000027947 ICA1L (ENSPPAG00000037623) #12 ENSPPAG00000033697 #13 CARF (ENSPPAG00000042960) #14 NBEAL1 (ENSPPAG00000040934) #15 CYP20A1 (ENSPPAG00000040724) #16 ABI2 (ENSPPAG00000030582) #18 RAPH1 (ENSPPAG00000024317) #19 ENSPPAG00000032675 CD28 (ENSPPAG00000034998) #20 CTLA4 (ENSPPAG00000041661) #21 ICOS (ENSPPAG00000037117) PARD3B (ENSPPAG00000033958) #22 NRP2 (ENSPPAG00000041062) #23 ENSPPAG00000040957 INO80D (ENSPPAG00000017120) #24 NDUFS1 (ENSPPAG00000032284) #25 ENSPPAG00000033754 ##26 ENSPPAG00000031391 ZDBF2 (ENSPPAG00000038901) #29 ADAM23 (ENSPPAG00000030147) #31 FAM237A (ENSPPAG00000028915) DYTN (ENSPPAG00000008787) #32 ENSPPAG00000031338 #33 FASTKD2 (ENSPPAG00000021300) #34 CPO (ENSPPAG00000033230) #35 KLF7 (ENSPPAG00000035305) #36 CREB1 (ENSPPAG00000042817) #37 Chimpanzee MODERN SPECIES 15 FAM117B (ENSPTRG00000012821) #11 ENSPTRG00000040928 ENSPTRG00000044806 ICA1L (ENSPTRG00000012822) #12 WDR12 (ENSPTRG00000012823) #13 CARF (ENSPTRG00000012824) #14 NBEAL1 (ENSPTRG00000012828) #15 ENSPTRG00000012829 #16 ABI2 (ENSPTRG00000012830) #18 RAPH1 (ENSPTRG00000012831) #19 ENSPTRG00000043246 CD28 (ENSPTRG00000012833) #20 ENSPTRG00000051964 CTLA4 (ENSPTRG00000044793) #21 ICOS (ENSPTRG00000012837) PARD3B (ENSPTRG00000012838) #22 NRP2 (ENSPTRG00000012839) #23 INO80D (ENSPTRG00000012841) #24 NDUFS1 (ENSPTRG00000012842) #25 EEF1B2 (ENSPTRG00000049619) ##26 CMKLR2 (ENSPTRG00000012844) #27 ENSPTRG00000052002 ZDBF2 (ENSPTRG00000029052) #29 ADAM23 (ENSPTRG00000012846) #31 FAM237A (ENSPTRG00000045763) DYTN (ENSPTRG00000042355) #32 MDH1B (ENSPTRG00000012847) #33 FASTKD2 (ENSPTRG00000012848) #34 CPO (ENSPTRG00000012849) #35 KLF7 (ENSPTRG00000012850) #36 CREB1 (ENSPTRG00000043959) #37 Human MODERN SPECIES 11 SUMO1 (ENSG00000116030) ##8 NOP58 (ENSG00000055044) #9 BMPR2 (ENSG00000204217) #10 ENSG00000289490 FAM117B (ENSG00000138439) #11 ICA1L (ENSG00000163596) #12 WDR12 (ENSG00000138442) #13 CARF (ENSG00000138380) #14 NBEAL1 (ENSG00000144426) #15 CYP20A1 (ENSG00000119004) #16 ABI2 (ENSG00000138443) #18 RAPH1 (ENSG00000173166) #19 CD28 (ENSG00000178562) #20 CTLA4 (ENSG00000163599) #21 ICOS (ENSG00000163600) PARD3B (ENSG00000116117) #22 NRP2 (ENSG00000118257) #23 INO80D (ENSG00000114933) #24 NDUFS1 (ENSG00000023228) #25 EEF1B2 (ENSG00000114942) ##26 CMKLR2 (ENSG00000183671) #27 ZDBF2 (ENSG00000204186) #29 ADAM23 (ENSG00000114948) #31 FAM237A (ENSG00000235118) DYTN (ENSG00000232125) #32 MDH1B (ENSG00000138400) #33 FASTKD2 (ENSG00000118246) #34 CPO (ENSG00000144410) #35 KLF7 (ENSG00000118263) #36 CREB1 (ENSG00000118260) #37 METTL21A (ENSG00000144401) Gorilla MODERN SPECIES 15 BMPR2 (ENSGGOG00000010989) #10 ENSGGOG00000014813 #11 ENSGGOG00000016194 ICA1L (ENSGGOG00000017038) #12 WDR12 (ENSGGOG00000026073) #13 ENSGGOG00000036442 #14 NBEAL1 (ENSGGOG00000015453) #15 CYP20A1 (ENSGGOG00000007044) #16 ABI2 (ENSGGOG00000016384) #18 RAPH1 (ENSGGOG00000016399) #19 ENSGGOG00000023735 CD28 (ENSGGOG00000041735) #20 ENSGGOG00000039900 CTLA4 (ENSGGOG00000007961) #21 ICOS (ENSGGOG00000014097) PARD3B (ENSGGOG00000034911) #22 NRP2 (ENSGGOG00000009537) #23 INO80D (ENSGGOG00000015570) #24 NDUFS1 (ENSGGOG00000001513) #25 EEF1B2 (ENSGGOG00000007002) ##26 ENSGGOG00000042195 ZDBF2 (ENSGGOG00000023142) #29 ENSGGOG00000024971 ADAM23 (ENSGGOG00000012509) #31 FAM237A (ENSGGOG00000037017) DYTN (ENSGGOG00000027242) #32 MDH1B (ENSGGOG00000002059) #33 FASTKD2 (ENSGGOG00000002062) #34 CPO (ENSGGOG00000016053) #35 KLF7 (ENSGGOG00000009338) #36 CREB1 (ENSGGOG00000024394) #37 Orangutan MODERN SPECIES 15 SUMO1 (ENSPPYG00000013083) ##8 NOP58 (ENSPPYG00000013084) #9 BMPR2 (ENSPPYG00000013085) #10 FAM117B (ENSPPYG00000037197) #11 ENSPPYG00000034941 ICA1L (ENSPPYG00000013088) #12 WDR12 (ENSPPYG00000040830) #13 CARF (ENSPPYG00000013090) #14 NBEAL1 (ENSPPYG00000013092) #15 CYP20A1 (ENSPPYG00000013093) #16 ABI2 (ENSPPYG00000013094) #18 RAPH1 (ENSPPYG00000013096) #19 CD28 (ENSPPYG00000039922) #20 CTLA4 (ENSPPYG00000036623) #21 ICOS (ENSPPYG00000013100) PARD3B (ENSPPYG00000013101) #22 NRP2 (ENSPPYG00000013102) #23 INO80D (ENSPPYG00000013104) #24 ENSPPYG00000038957 NDUFS1 (ENSPPYG00000013106) #25 EEF1B2 (ENSPPYG00000013107) ##26 CMKLR2 (ENSPPYG00000013108) #27 ZDBF2 (ENSPPYG00000013109) #29 ADAM23 (ENSPPYG00000013110) #31 FAM237A (ENSPPYG00000036282) DYTN (ENSPPYG00000031262) #32 MDH1B (ENSPPYG00000013111) #33 FASTKD2 (ENSPPYG00000013112) #34 CPO (ENSPPYG00000013113) #35 KLF7 (ENSPPYG00000013114) #36 CREB1 (ENSPPYG00000013115) #37 Gibbon DUPLICATION Gibbon MODERN SPECIES 14 ICA1L (ENSNLEG00000007012) #12 WDR12 (ENSNLEG00000007018) #13 CARF (ENSNLEG00000007026) #14 NBEAL1 (ENSNLEG00000007032) #15 ENSNLEG00000029450 CYP20A1 (ENSNLEG00000035097) #16 ENSNLEG00000007043 #18 RAPH1 (ENSNLEG00000007048) #19 ENSNLEG00000030127 ENSNLEG00000035533 ENSNLEG00000029125 CD28 (ENSNLEG00000007057) #20 CTLA4 (ENSNLEG00000007059) #21 ICOS (ENSNLEG00000007065) ENSNLEG00000007066 #22 ENSNLEG00000036209 #22 NRP2 (ENSNLEG00000007071) #23 INO80D (ENSNLEG00000032256) #24 NDUFS1 (ENSNLEG00000007090) #25 ENSNLEG00000007098 ##26 ENSNLEG00000033131 ZDBF2 (ENSNLEG00000007100) #29 ADAM23 (ENSNLEG00000007102) #31 FAM237A (ENSNLEG00000007112) DYTN (ENSNLEG00000007113) #32 MDH1B (ENSNLEG00000007114) #33 FASTKD2 (ENSNLEG00000007116) #34 CPO (ENSNLEG00000007121) #35 KLF7 (ENSNLEG00000035258) #36 CREB1 (ENSNLEG00000007124) #37 METTL21A (ENSNLEG00000007129) Gibbon MODERN SPECIES 14 ENSNLEG00000027717 ICA1L (ENSNLEG00000007012) #12 WDR12 (ENSNLEG00000007018) #13 CARF (ENSNLEG00000007026) #14 NBEAL1 (ENSNLEG00000007032) #15 ENSNLEG00000029450 CYP20A1 (ENSNLEG00000035097) #16 ENSNLEG00000007043 #18 RAPH1 (ENSNLEG00000007048) #19 ENSNLEG00000030127 ENSNLEG00000035533 ENSNLEG00000029125 CD28 (ENSNLEG00000007057) #20 CTLA4 (ENSNLEG00000007059) #21 ICOS (ENSNLEG00000007065) ENSNLEG00000007066 #22 ENSNLEG00000036209 #22 NRP2 (ENSNLEG00000007071) #23 INO80D (ENSNLEG00000032256) #24 NDUFS1 (ENSNLEG00000007090) #25 ENSNLEG00000007098 ##26 ENSNLEG00000033131 ZDBF2 (ENSNLEG00000007100) #29 ADAM23 (ENSNLEG00000007102) #31 FAM237A (ENSNLEG00000007112) DYTN (ENSNLEG00000007113) #32 MDH1B (ENSNLEG00000007114) #33 FASTKD2 (ENSNLEG00000007116) #34 CPO (ENSNLEG00000007121) #35 KLF7 (ENSNLEG00000035258) #36 CREB1 (ENSNLEG00000007124) #37 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Glires ANCESTRAL SPECIES 14 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Rodentia ANCESTRAL SPECIES 14 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Rodentia_B ANCESTRAL SPECIES 12 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Myomorpha ANCESTRAL SPECIES 10 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Muroidea ANCESTRAL SPECIES 20 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Muroidea_A ANCESTRAL SPECIES 19 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Cricetidae ANCESTRAL SPECIES 19 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Cricetinae ANCESTRAL SPECIES 3 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Golden Hamster MODERN SPECIES 640 Sumo1 (ENSMAUG00000011639) #8 Nop58 (ENSMAUG00000009734) #9 Bmpr2 (ENSMAUG00000009115) #10 Fam117b (ENSMAUG00000017770) #11 Ica1l (ENSMAUG00000013926) #12 Wdr12 (ENSMAUG00000001279) #13 Carf (ENSMAUG00000009693) #14 ENSMAUG00000007926 #15 ENSMAUG00000001805 #15 ENSMAUG00000007020 #16 Abi2 (ENSMAUG00000016724) #18 ENSMAUG00000008616 #19 Cd28 (ENSMAUG00000020132) #20 Ctla4 (ENSMAUG00000017208) #21 Icos (ENSMAUG00000019187) Pard3b (ENSMAUG00000019516) #22 Nrp2 (ENSMAUG00000020662) #23 Ino80d (ENSMAUG00000012087) #24 ENSMAUG00000017015 #25 Eef1b2 (ENSMAUG00000011478) #26 Cmklr2 (ENSMAUG00000009931) #27 Zdbf2 (ENSMAUG00000017491) #29 Adam23 (ENSMAUG00000012410) #31 Dytn (ENSMAUG00000021422) #32 Mdh1b (ENSMAUG00000016431) #33 Fastkd2 (ENSMAUG00000009136) #34 Klf7 (ENSMAUG00000022037) #36 Creb1 (ENSMAUG00000018215) #37 Mettl21a (ENSMAUG00000020877) Fzd5 (ENSMAUG00000022033) Plekhm3 (ENSMAUG00000021638) Chinese hamster chok1gshd MODERN SPECIES 1 ENSCGRG00001017267 #8 Nop58 (ENSCGRG00001017869) #9 ENSCGRG00001009737 Bmpr2 (ENSCGRG00001020694) #10 Fam117b (ENSCGRG00001020456) #11 Ica1l (ENSCGRG00001018928) #12 WDR12 (ENSCGRG00001016494) #13 Carf (ENSCGRG00001016848) #14 Nbeal1 (ENSCGRG00001018313) #15 Cyp20a1 (ENSCGRG00001018508) #16 Abi2 (ENSCGRG00001017572) #18 Raph1 (ENSCGRG00001019075) #19 Cd28 (ENSCGRG00001021553) #20 Ctla4 (ENSCGRG00001017244) #21 Icos (ENSCGRG00001016804) Pard3b (ENSCGRG00001023180) #22 Nrp2 (ENSCGRG00001001140) #23 Ino80d (ENSCGRG00001020225) #24 Ndufs1 (ENSCGRG00001018185) #25 Eef1b2 (ENSCGRG00001017503) #26 Cmklr2 (ENSCGRG00001010463) #27 Zdbf2 (ENSCGRG00001018156) #29 Adam23 (ENSCGRG00001021362) #31 Gm39653 (ENSCGRG00001017288) Dytn (ENSCGRG00001017611) #32 Mdh1b (ENSCGRG00001017642) #33 Fastkd2 (ENSCGRG00001020432) #34 Klf7 (ENSCGRG00001018794) #36 ENSCGRG00001018665 Creb1 (ENSCGRG00001018838) #37 Mettl21a (ENSCGRG00001017438) Cricetidae_B ANCESTRAL SPECIES 20 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Northern American deer mouse MODERN SPECIES 4 ENSPEMG00000021263 #9 Bmpr2 (ENSPEMG00000022646) #10 Fam117b (ENSPEMG00000011700) #11 ENSPEMG00000024187 Ica1l (ENSPEMG00000021278) #12 Wdr12 (ENSPEMG00000022189) #13 Carf (ENSPEMG00000020983) #14 ENSPEMG00000028509 Nbeal1 (ENSPEMG00000029402) #15 Cyp20a1 (ENSPEMG00000023627) #16 Abi2 (ENSPEMG00000020443) #18 Raph1 (ENSPEMG00000022086) #19 Cd28 (ENSPEMG00000028537) #20 Ctla4 (ENSPEMG00000020722) #21 Icos (ENSPEMG00000015472) Pard3b (ENSPEMG00000020745) #22 Nrp2 (ENSPEMG00000020944) #23 Ino80d (ENSPEMG00000020652) #24 Ndufs1 (ENSPEMG00000020453) #25 Eef1b2 (ENSPEMG00000016842) #26 Cmklr2 (ENSPEMG00000000909) #27 Zdbf2 (ENSPEMG00000029531) #29 Adam23 (ENSPEMG00000020455) #31 Gm39653 (ENSPEMG00000029994) Dytn (ENSPEMG00000020630) #32 Mdh1b (ENSPEMG00000012142) #33 Fastkd2 (ENSPEMG00000010593) #34 ENSPEMG00000029845 Klf7 (ENSPEMG00000028836) #36 Creb1 (ENSPEMG00000012416) #37 Mettl21a (ENSPEMG00000027520) Prairie vole MODERN SPECIES 354 ENSMOCG00000015799 Daw1 (ENSMOCG00000014056) Sphkap (ENSMOCG00000010348) Pid1 (ENSMOCG00000022904) Dner (ENSMOCG00000020102) Trip12 (ENSMOCG00000021899) Fbxo36 (ENSMOCG00000015360) Slc16a14 (ENSMOCG00000006969) Nbeal1 (ENSMOCG00000015319) #15 Abi2 (ENSMOCG00000013762) #18 Raph1 (ENSMOCG00000016577) #19 Cd28 (ENSMOCG00000003240) #20 Ctla4 (ENSMOCG00000018484) #21 ENSMOCG00000017292 Icos (ENSMOCG00000008578) Pard3b (ENSMOCG00000021107) #22 Nrp2 (ENSMOCG00000018160) #23 Ino80d (ENSMOCG00000022487) #24 Ndufs1 (ENSMOCG00000018918) #25 Eef1b2 (ENSMOCG00000004803) #26 Zdbf2 (ENSMOCG00000021962) #29 Adam23 (ENSMOCG00000012227) #31 ENSMOCG00000001238 Dytn (ENSMOCG00000015652) #32 Mdh1b (ENSMOCG00000001314) #33 Fastkd2 (ENSMOCG00000019859) #34 ENSMOCG00000008631 Klf7 (ENSMOCG00000009593) #36 Creb1 (ENSMOCG00000002192) #37 Mettl21a (ENSMOCG00000017410) Ccnyl1 (ENSMOCG00000016018) Murinae ANCESTRAL SPECIES 9 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Mus ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00860000135862 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Mus_A ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00860000135862 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Mus_B ANCESTRAL SPECIES 7 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089.l #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00860000135862 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Mouse MODERN SPECIES Gm973 (ENSMUSG00000047361) #7 Sumo1 (ENSMUSG00000026021) #8 Nop58 (ENSMUSG00000026020) #9 Bmpr2 (ENSMUSG00000067336) #10 Fam117b (ENSMUSG00000041040) #11 Ica1l (ENSMUSG00000026018) #12 Wdr12 (ENSMUSG00000026019) #13 Carf (ENSMUSG00000026017) #14 Nbeal1 (ENSMUSG00000073664) #15 Cyp20a1 (ENSMUSG00000049439) #16 Abi2 (ENSMUSG00000026782) #18 Raph1 (ENSMUSG00000026014) #19 Cd28 (ENSMUSG00000026012) #20 Ctla4 (ENSMUSG00000026011) #21 Icos (ENSMUSG00000026009) Pard3b (ENSMUSG00000052062) #22 Nrp2 (ENSMUSG00000025969) #23 Ino80d (ENSMUSG00000040865) #24 Ndufs1 (ENSMUSG00000025968) #25 Eef1b2 (ENSMUSG00000025967) #26 Cmklr2 (ENSMUSG00000046856) #27 Zdbf2 (ENSMUSG00000027520) #29 Adam23 (ENSMUSG00000025964) #31 Gm39653 (ENSMUSG00000115378) Dytn (ENSMUSG00000069085) #32 Mdh1b (ENSMUSG00000025963) #33 Fastkd2 (ENSMUSG00000025962) #34 Klf7 (ENSMUSG00000025959) #36 Creb1 (ENSMUSG00000025958) #37 Mettl21a (ENSMUSG00000025956) Ccnyl1 (ENSMUSG00000070871) Mus_C ANCESTRAL SPECIES 1 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089.l #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00860000135862 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Steppe mouse MODERN SPECIES 44 Nop58 (ENSMSIG00000009865) #9 Bmpr2 (ENSMSIG00000009989) #10 Fam117b (ENSMSIG00000010018) #11 Ica1l (ENSMSIG00000010027) #12 Wdr12 (ENSMSIG00000010103) #13 Carf (ENSMSIG00000010210) #14 ENSMSIG00000010287 Nbeal1 (ENSMSIG00000010304) #15 Cyp20a1 (ENSMSIG00000010618) #16 ENSMSIG00000010702 #18 Raph1 (ENSMSIG00000010756) #19 Cd28 (ENSMSIG00000011356) #20 ENSMSIG00000011370 Ctla4 (ENSMSIG00000011388) #21 Icos (ENSMSIG00000011424) Pard3b (ENSMSIG00000011469) #22 ENSMSIG00000011764 Nrp2 (ENSMSIG00000011775) #23 Ino80d (ENSMSIG00000012604) #24 Ndufs1 (ENSMSIG00000012674) #25 Eef1b2 (ENSMSIG00000012804) #26 Cmklr2 (ENSMSIG00000012880) #27 Zdbf2 (ENSMSIG00000012889) #29 ENSMSIG00000012937 Adam23 (ENSMSIG00000012957) #31 ENSMSIG00000013264 Gm39653 (ENSMSIG00000013270) Dytn (ENSMSIG00000013289) #32 spretus MODERN SPECIES Gm973 (MGP_SPRETEiJ_G0014986) #7 Sumo1 (MGP_SPRETEiJ_G0014987) #8 Nop58 (MGP_SPRETEiJ_G0014988) #9 Bmpr2 (MGP_SPRETEiJ_G0014989) #10 MGP_SPRETEiJ_G0014990 ##11 Ica1l (MGP_SPRETEiJ_G0014991) #12 Wdr12 (MGP_SPRETEiJ_G0014992) #13 Carf (MGP_SPRETEiJ_G0014993) #14 Nbeal1 (MGP_SPRETEiJ_G0014994) #15 Cyp20a1 (MGP_SPRETEiJ_G0014995) #16 Abi2 (MGP_SPRETEiJ_G0014996) #18 Raph1 (MGP_SPRETEiJ_G0014997) #19 Cd28 (MGP_SPRETEiJ_G0014998) #20 Ctla4 (MGP_SPRETEiJ_G0014999) #21 Icos (MGP_SPRETEiJ_G0015000) Pard3b (MGP_SPRETEiJ_G0015001) #22 Nrp2 (MGP_SPRETEiJ_G0015002) #23 Ino80d (MGP_SPRETEiJ_G0015003) #24 Ndufs1 (MGP_SPRETEiJ_G0015004) #25 Eef1b2 (MGP_SPRETEiJ_G0015005) #26 Cmklr2 (MGP_SPRETEiJ_G0015006) #27 Zdbf2 (MGP_SPRETEiJ_G0015007) #29 Adam23 (MGP_SPRETEiJ_G0015008) #31 Dytn (MGP_SPRETEiJ_G0015009) #32 Mdh1b (MGP_SPRETEiJ_G0015010) #33 Fastkd2 (MGP_SPRETEiJ_G0015011) #34 MGP_SPRETEiJ_G0015012 Klf7 (MGP_SPRETEiJ_G0015013) #36 Creb1 (MGP_SPRETEiJ_G0015014) #37 Mettl21a (MGP_SPRETEiJ_G0015015) Ccnyl1 (MGP_SPRETEiJ_G0015016) Ryukyu mouse MODERN SPECIES Gm973 (MGP_CAROLIEiJ_G0014179) #7 Sumo1 (MGP_CAROLIEiJ_G0014180) #8 Nop58 (MGP_CAROLIEiJ_G0014181) #9 Bmpr2 (MGP_CAROLIEiJ_G0014182) #10 Fam117b (MGP_CAROLIEiJ_G0014183) #11 MGP_CAROLIEiJ_G0014184 #12 MGP_CAROLIEiJ_G0014185 Carf (MGP_CAROLIEiJ_G0014186) #14 Nbeal1 (MGP_CAROLIEiJ_G0014187) #15 Cyp20a1 (MGP_CAROLIEiJ_G0014188) #16 Abi2 (MGP_CAROLIEiJ_G0014189) #18 Raph1 (MGP_CAROLIEiJ_G0014190) #19 Cd28 (MGP_CAROLIEiJ_G0014191) #20 Ctla4 (MGP_CAROLIEiJ_G0014192) #21 Icos (MGP_CAROLIEiJ_G0014193) Pard3b (MGP_CAROLIEiJ_G0014194) #22 Nrp2 (MGP_CAROLIEiJ_G0014195) #23 Ino80d (MGP_CAROLIEiJ_G0014196) #24 Ndufs1 (MGP_CAROLIEiJ_G0014197) #25 Eef1b2 (MGP_CAROLIEiJ_G0014198) #26 Cmklr2 (MGP_CAROLIEiJ_G0014199) #27 Zdbf2 (MGP_CAROLIEiJ_G0014200) #29 Adam23 (MGP_CAROLIEiJ_G0014201) #31 Dytn (MGP_CAROLIEiJ_G0014202) #32 Mdh1b (MGP_CAROLIEiJ_G0014203) #33 Fastkd2 (MGP_CAROLIEiJ_G0014204) #34 MGP_CAROLIEiJ_G0014205 Klf7 (MGP_CAROLIEiJ_G0014206) #36 Creb1 (MGP_CAROLIEiJ_G0014207) #37 Mettl21a (MGP_CAROLIEiJ_G0014208) Ccnyl1 (MGP_CAROLIEiJ_G0014209) Shrew mouse MODERN SPECIES 18 Gm973 (MGP_PahariEiJ_G0027417) #7 MGP_PahariEiJ_G0027418 #8 Nop58 (MGP_PahariEiJ_G0027419) #9 Bmpr2 (MGP_PahariEiJ_G0027420) #10 Fam117b (MGP_PahariEiJ_G0027421) #11 MGP_PahariEiJ_G0027422 #12 MGP_PahariEiJ_G0027423 #13 Carf (MGP_PahariEiJ_G0027424) #14 MGP_PahariEiJ_G0027425 #15 Cyp20a1 (MGP_PahariEiJ_G0027426) #16 Abi2 (MGP_PahariEiJ_G0027427) #18 Raph1 (MGP_PahariEiJ_G0027428) #19 Cd28 (MGP_PahariEiJ_G0027429) #20 Ctla4 (MGP_PahariEiJ_G0027430) #21 MGP_PahariEiJ_G0027431 Pard3b (MGP_PahariEiJ_G0027432) #22 Nrp2 (MGP_PahariEiJ_G0027433) #23 Ino80d (MGP_PahariEiJ_G0027434) #24 MGP_PahariEiJ_G0027435 #25 Eef1b2 (MGP_PahariEiJ_G0027436) #26 Cmklr2 (MGP_PahariEiJ_G0027437) #27 Zdbf2 (MGP_PahariEiJ_G0027438) #29 Adam23 (MGP_PahariEiJ_G0027439) #31 Dytn (MGP_PahariEiJ_G0027440) #32 Mdh1b (MGP_PahariEiJ_G0027441) #33 Fastkd2 (MGP_PahariEiJ_G0027442) #34 MGP_PahariEiJ_G0027443 Klf7 (MGP_PahariEiJ_G0027444) #36 Creb1 (MGP_PahariEiJ_G0027445) #37 Mettl21a (MGP_PahariEiJ_G0027446) Ccnyl1 (MGP_PahariEiJ_G0027447) Rat MODERN SPECIES 19 Nop58 (ENSRNOG00000016486) #9 Bmpr2 (ENSRNOG00000022196) #10 ENSRNOG00000066953 LOC301444 (ENSRNOG00000019107) Fam117b (ENSRNOG00000022066) #11 Ica1l (ENSRNOG00000017258) #12 Wdr12 (ENSRNOG00000017340) #13 Carf (ENSRNOG00000017491) #14 Nbeal1 (ENSRNOG00000021525) #15 Cyp20a1 (ENSRNOG00000017631) #16 Abi2 (ENSRNOG00000017707) #18 Raph1 (ENSRNOG00000014722) #19 Cd28 (ENSRNOG00000010283) #20 Ctla4 (ENSRNOG00000054129) #21 Icos (ENSRNOG00000046196) Pard3b (ENSRNOG00000024345) #22 Nrp2 (ENSRNOG00000031232) #23 Rpl37-ps5 (ENSRNOG00000033803) Ino80d (ENSRNOG00000024272) #24 Ndufs1 (ENSRNOG00000011849) #25 Eef1b2 (ENSRNOG00000024186) #26 Cmklr2 (ENSRNOG00000045532) #27 Zdbf2 (ENSRNOG00000024114) #29 Adam23 (ENSRNOG00000012424) #31 Fam237a (ENSRNOG00000054699) Dytn (ENSRNOG00000042181) #32 Mdh1b (ENSRNOG00000012891) #33 ENSRNOG00000063009 Fastkd2 (ENSRNOG00000023923) #34 ENSRNOG00000063607 Klf7 (ENSRNOG00000046242) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1322 Nbeal1 (ENSNGAG00000020072) #15 Cyp20a1 (ENSNGAG00000020232) #16 Abi2 (ENSNGAG00000012110) #18 ENSNGAG00000001490 #19 Cd28 (ENSNGAG00000015761) #20 Ctla4 (ENSNGAG00000019017) #21 ENSNGAG00000010975 Icos (ENSNGAG00000015325) Pard3b (ENSNGAG00000019309) #22 Nrp2 (ENSNGAG00000014175) #23 Ino80d (ENSNGAG00000007370) #24 Ndufs1 (ENSNGAG00000016531) #25 Eef1b2 (ENSNGAG00000020801) #26 Cmklr2 (ENSNGAG00000014936) #27 Zdbf2 (ENSNGAG00000010826) #29 Adam23 (ENSNGAG00000014933) #31 Mdh1b (ENSNGAG00000000139) #33 Fastkd2 (ENSNGAG00000001279) #34 Klf7 (ENSNGAG00000016561) #36 Creb1 (ENSNGAG00000018967) #37 Mettl21a (ENSNGAG00000013752) ENSNGAG00000014167 Ccnyl1 (ENSNGAG00000004870) Fzd5 (ENSNGAG00000014954) Lesser Egyptian jerboa MODERN SPECIES 52 Gm973 (ENSJJAG00000024266) #7 ENSJJAG00000022745 #8 Nop58 (ENSJJAG00000018213) #9 Bmpr2 (ENSJJAG00000015151) #10 Fam117b (ENSJJAG00000019496) #11 Ica1l (ENSJJAG00000022732) #12 ENSJJAG00000000724 #13 Carf (ENSJJAG00000014072) #14 Nbeal1 (ENSJJAG00000023210) #15 Cyp20a1 (ENSJJAG00000007155) #16 Abi2 (ENSJJAG00000006918) #18 ENSJJAG00000023840 #19 Cd28 (ENSJJAG00000001227) #20 Ctla4 (ENSJJAG00000013112) #21 Icos (ENSJJAG00000007794) Pard3b (ENSJJAG00000015271) #22 Nrp2 (ENSJJAG00000016788) #23 Ino80d (ENSJJAG00000018074) #24 Ndufs1 (ENSJJAG00000013916) #25 Eef1b2 (ENSJJAG00000004915) #26 Adam23 (ENSJJAG00000016078) #31 Dytn (ENSJJAG00000016868) #32 Mdh1b (ENSJJAG00000010713) #33 Fastkd2 (ENSJJAG00000000986) #34 ENSJJAG00000021742 #35 Klf7 (ENSJJAG00000011480) #36 Creb1 (ENSJJAG00000013846) #37 ENSJJAG00000023618 Ccnyl1 (ENSJJAG00000024111) Fzd5 (ENSJJAG00000004014) Plekhm3 (ENSJJAG00000012116) Kangaroo rat MODERN SPECIES 320 ENSDORG00000025164 Bmpr2 (ENSDORG00000009209) #10 ENSDORG00000015288 #11 Ica1l (ENSDORG00000015292) #12 Wdr12 (ENSDORG00000015294) #13 Carf (ENSDORG00000006614) #14 Nbeal1 (ENSDORG00000015714) #15 Cyp20a1 (ENSDORG00000015715) #16 ENSDORG00000028647 Abi2 (ENSDORG00000028252) #18 ENSDORG00000007525 #19 Cd28 (ENSDORG00000013428) #20 Ctla4 (ENSDORG00000008556) #21 Icos (ENSDORG00000010237) ENSDORG00000029364 Pard3b (ENSDORG00000014139) #22 ENSDORG00000029450 #23 Ino80d (ENSDORG00000027999) #24 ENSDORG00000025350 #25 ENSDORG00000023550 #25 Cmklr2 (ENSDORG00000013107) #27 Adam23 (ENSDORG00000015422) #31 Dytn (ENSDORG00000028814) #32 Mdh1b (ENSDORG00000011290) #33 Fastkd2 (ENSDORG00000011295) #34 Klf7 (ENSDORG00000009634) #36 Creb1 (ENSDORG00000012535) #37 Mettl21a (ENSDORG00000012543) Ccnyl1 (ENSDORG00000009933) Fzd5 (ENSDORG00000027490) ENSDORG00000023690 Rodentia_A ANCESTRAL SPECIES 13 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Sciuridae ANCESTRAL SPECIES 10 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Marmotini ANCESTRAL SPECIES 2 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.g #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Marmotini_b ANCESTRAL SPECIES 103 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.g #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Squirrel MODERN SPECIES 231 ABI2 (ENSSTOG00000015888) #18 RAPH1 (ENSSTOG00000028594) #19 CD28 (ENSSTOG00000026213) #20 CTLA4 (ENSSTOG00000020540) #21 ICOS (ENSSTOG00000013542) PARD3B (ENSSTOG00000010207) #22 NRP2 (ENSSTOG00000010229) #23 INO80D (ENSSTOG00000028419) #24 NDUFS1 (ENSSTOG00000010255) #25 EEF1B2 (ENSSTOG00000005437) #26 CMKLR2 (ENSSTOG00000005452) #27 ZDBF2 (ENSSTOG00000001663) #29 ADAM23 (ENSSTOG00000024094) #31 DYTN (ENSSTOG00000019822) #32 MDH1B (ENSSTOG00000003194) #33 FASTKD2 (ENSSTOG00000022821) #34 CPO (ENSSTOG00000013351) #35 KLF7 (ENSSTOG00000011069) #36 CREB1 (ENSSTOG00000016482) #37 METTL21A (ENSSTOG00000016483) ENSSTOG00000021511 Arctic ground squirrel MODERN SPECIES 141 CYP20A1 (ENSUPAG00010007092) #16 ABI2 (ENSUPAG00010007107) #18 RAPH1 (ENSUPAG00010007232) #19 ENSUPAG00010007347 CD28 (ENSUPAG00010007360) #20 CTLA4 (ENSUPAG00010007371) #21 ICOS (ENSUPAG00010007386) PARD3B (ENSUPAG00010007426) #22 NRP2 (ENSUPAG00010007567) #23 INO80D (ENSUPAG00010007624) #24 NDUFS1 (ENSUPAG00010007661) #25 EEF1B2 (ENSUPAG00010007678) #26 CMKLR2 (ENSUPAG00010007707) #27 ZDBF2 (ENSUPAG00010007725) #29 ADAM23 (ENSUPAG00010007731) #31 FAM237A (ENSUPAG00010007856) DYTN (ENSUPAG00010007862) #32 MDH1B (ENSUPAG00010007886) #33 FASTKD2 (ENSUPAG00010007916) #34 CPO (ENSUPAG00010007941) #35 KLF7 (ENSUPAG00010007967) #36 CREB1 (ENSUPAG00010007984) #37 METTL21A (ENSUPAG00010008009) Alpin marmot MODERN SPECIES 8 ENSMMMG00000012991 BMPR2 (ENSMMMG00000012999) #10 ENSMMMG00000013017 ENSMMMG00000013051 #11 ENSMMMG00000013060 #11 ICA1L (ENSMMMG00000013064) #12 WDR12 (ENSMMMG00000013110) #13 CARF (ENSMMMG00000013161) #14 NBEAL1 (ENSMMMG00000013229) #15 CYP20A1 (ENSMMMG00000013312) #16 ABI2 (ENSMMMG00000013329) #18 ENSMMMG00000013568 #19 CD28 (ENSMMMG00000013599) #20 CTLA4 (ENSMMMG00000013609) #21 ICOS (ENSMMMG00000013624) PARD3B (ENSMMMG00000013680) #22 ENSMMMG00000013911 NRP2 (ENSMMMG00000013924) #23 INO80D (ENSMMMG00000014555) #24 NDUFS1 (ENSMMMG00000014566) #25 ENSMMMG00000014596 #26 CMKLR2 (ENSMMMG00000014632) #27 ZDBF2 (ENSMMMG00000014650) #29 ADAM23 (ENSMMMG00000014678) #31 FAM237A (ENSMMMG00000014819) DYTN (ENSMMMG00000014828) #32 ENSMMMG00000014844 MDH1B (ENSMMMG00000014852) #33 FASTKD2 (ENSMMMG00000014857) #34 CPO (ENSMMMG00000014874) #35 KLF7 (ENSMMMG00000014897) #36 Eurasian red squirrel MODERN SPECIES 12 ENSSVLG00005000315 #8 ENSSVLG00005000362 #9 BMPR2 (ENSSVLG00005000484) #10 ENSSVLG00005000534 #11 ENSSVLG00005000554 ENSSVLG00005000579 #12 WDR12 (ENSSVLG00005000598) #13 ENSSVLG00005000686 #14 ENSSVLG00005000784 NBEAL1 (ENSSVLG00005000853) #15 CYP20A1 (ENSSVLG00005000970) #16 ABI2 (ENSSVLG00005001071) #18 CD28 (ENSSVLG00005001473) #20 CTLA4 (ENSSVLG00005001529) #21 ICOS (ENSSVLG00005001570) PARD3B (ENSSVLG00005001789) #22 NRP2 (ENSSVLG00005002141) #23 INO80D (ENSSVLG00005002283) #24 ENSSVLG00005002396 #25 ENSSVLG00005002606 #26 CMKLR2 (ENSSVLG00005002631) #27 ENSSVLG00005002653 #29 ADAM23 (ENSSVLG00005002721) #31 FAM237A (ENSSVLG00005002854) DYTN (ENSSVLG00005002873) #32 MDH1B (ENSSVLG00005002924) #33 FASTKD2 (ENSSVLG00005002985) #34 CPO (ENSSVLG00005003015) #35 KLF7 (ENSSVLG00005003049) #36 CREB1 (ENSSVLG00005003093) #37 METTL21A (ENSSVLG00005003134) Hystricomorpha ANCESTRAL SPECIES 28 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A.t.a #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b Hystricomorpha_a ANCESTRAL SPECIES 67 ENSGT00940000158239.b ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A.t.a #9 ENSGT00940000156449 #10 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Hystricomorpha_b ANCESTRAL SPECIES 52 ENSGT00940000158239.b ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A.t.a #9 ENSGT00940000156449 #10 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b ENSGT00940000162639 ENSGT00940000159743 Long-tailed chinchilla MODERN SPECIES 164 BMPR2 (ENSCLAG00000006272) #10 ICA1L (ENSCLAG00000005015) #12 WDR12 (ENSCLAG00000004491) #13 CARF (ENSCLAG00000007915) #14 ENSCLAG00000007700 ENSCLAG00000006700 NBEAL1 (ENSCLAG00000005102) #15 CYP20A1 (ENSCLAG00000004163) #16 ENSCLAG00000006025 ENSCLAG00000004760 ABI2 (ENSCLAG00000004021) #18 ENSCLAG00000003175 #19 CD28 (ENSCLAG00000004670) #20 CTLA4 (ENSCLAG00000004042) #21 ICOS (ENSCLAG00000003964) PARD3B (ENSCLAG00000010240) #22 NRP2 (ENSCLAG00000009120) #23 INO80D (ENSCLAG00000006191) #24 NDUFS1 (ENSCLAG00000009634) #25 EEF1B2 (ENSCLAG00000009181) #26 CMKLR2 (ENSCLAG00000008973) #27 ENSCLAG00000008490 ATXN3L (ENSCLAG00000005825) ADAM23 (ENSCLAG00000004674) #31 DYTN (ENSCLAG00000003705) #32 MDH1B (ENSCLAG00000003385) #33 FASTKD2 (ENSCLAG00000007036) #34 KLF7 (ENSCLAG00000006083) #36 CREB1 (ENSCLAG00000005853) #37 METTL21A (ENSCLAG00000005572) ENSCLAG00000005432 Degu MODERN SPECIES 57 ENSODEG00000010403 #12 ENSODEG00000009897 ENSODEG00000011455 WDR12 (ENSODEG00000011602) #13 CARF (ENSODEG00000011312) #14 NBEAL1 (ENSODEG00000010440) #15 CYP20A1 (ENSODEG00000010253) #16 ENSODEG00000009779 ABI2 (ENSODEG00000009457) #18 ENSODEG00000013477 #19 CTLA4 (ENSODEG00000009327) #21 ENSODEG00000010295 ICOS (ENSODEG00000011327) ENSODEG00000009131 ENSODEG00000010021 PARD3B (ENSODEG00000012523) #22 ENSODEG00000010455 #23 INO80D (ENSODEG00000009769) #24 ENSODEG00000019630 ENSODEG00000008842 #25 ENSODEG00000009030 #25 ENSODEG00000008974 #25 ENSODEG00000010229 #26 ENSODEG00000019757 ADAM23 (ENSODEG00000011161) #31 DYTN (ENSODEG00000009029) #32 MDH1B (ENSODEG00000009494) #33 FASTKD2 (ENSODEG00000009880) #34 KLF7 (ENSODEG00000010345) #36 ENSODEG00000009956 ENSODEG00000009302 Guinea pig MODERN SPECIES 13 FZD7 (ENSCPOG00000003276) SUMO1 (ENSCPOG00000039864) #8 NOP58 (ENSCPOG00000030510) #9 BMPR2 (ENSCPOG00000009586) #10 ICA1L (ENSCPOG00000009349) #12 WDR12 (ENSCPOG00000008824) #13 CARF (ENSCPOG00000008827) #14 NBEAL1 (ENSCPOG00000008009) #15 CYP20A1 (ENSCPOG00000009758) #16 ABI2 (ENSCPOG00000007562) #18 RAPH1 (ENSCPOG00000020239) #19 CD28 (ENSCPOG00000035938) #20 CTLA4 (ENSCPOG00000019534) #21 ICOS (ENSCPOG00000030931) ENSCPOG00000030358 PARD3B (ENSCPOG00000004380) #22 NRP2 (ENSCPOG00000004390) #23 ENSCPOG00000010964 #24 NDUFS1 (ENSCPOG00000005555) #25 EEF1B2 (ENSCPOG00000014496) #26 ADAM23 (ENSCPOG00000005871) #31 MDH1B (ENSCPOG00000005608) #33 FASTKD2 (ENSCPOG00000005624) #34 KLF7 (ENSCPOG00000009080) #36 CREB1 (ENSCPOG00000010778) #37 METTL21A (ENSCPOG00000034803) ENSCPOG00000035156 FZD5 (ENSCPOG00000038146) PLEKHM3 (ENSCPOG00000004119) CRYGC (ENSCPOG00000000186) ENSCPOG00000022025 Naked mole-rat female MODERN SPECIES 17 WDR12 (ENSHGLG00000004891) #13 ENSHGLG00000004722 ENSHGLG00000020889 CARF (ENSHGLG00000007326) #14 ENSHGLG00000037622 NBEAL1 (ENSHGLG00000004471) #15 CYP20A1 (ENSHGLG00000050312) #16 ABI2 (ENSHGLG00000007481) #18 ENSHGLG00000005031 #19 CD28 (ENSHGLG00000037192) #20 CTLA4 (ENSHGLG00000009115) #21 ICOS (ENSHGLG00000008777) ENSHGLG00000043313 ENSHGLG00000016877 ENSHGLG00000048100 PARD3B (ENSHGLG00000004982) #22 NRP2 (ENSHGLG00000010562) #23 ENSHGLG00000049876 INO80D (ENSHGLG00000018537) #24 NDUFS1 (ENSHGLG00000015179) #25 EEF1B2 (ENSHGLG00000015147) #26 ENSHGLG00000045433 CMKLR2 (ENSHGLG00000046982) #27 ENSHGLG00000044712 #29 ADAM23 (ENSHGLG00000006393) #31 FAM237A (ENSHGLG00000030355) ENSHGLG00000005368 MDH1B (ENSHGLG00000004936) #33 FASTKD2 (ENSHGLG00000004761) #34 ENSHGLG00000045814 KLF7 (ENSHGLG00000044157) #36 Lagomorpha ANCESTRAL SPECIES 13 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041.ob #15 ENSGT00940000155041.nb #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.a Rabbit MODERN SPECIES 18 BMPR2 (ENSOCUG00000001971) #10 ENSOCUG00000006347 #11 ENSOCUG00000030693 #11 ENSOCUG00000010497 #12 WDR12 (ENSOCUG00000002961) #13 CARF (ENSOCUG00000005335) #14 ENSOCUG00000027134 NBEAL1 (ENSOCUG00000008716) #15 CYP20A1 (ENSOCUG00000008054) #16 ENSOCUG00000008062 #18 ENSOCUG00000016722 #19 CD28 (ENSOCUG00000016134) #20 ENSOCUG00000030918 CTLA4 (ENSOCUG00000017274) #21 ICOS (ENSOCUG00000001858) PARD3B (ENSOCUG00000007959) #22 NRP2 (ENSOCUG00000007978) #23 INO80D (ENSOCUG00000014786) #24 ENSOCUG00000009848 #26 NDUFS1 (ENSOCUG00000012368) #25 CMKLR2 (ENSOCUG00000012384) #27 ENSOCUG00000024602 ENSOCUG00000009421 #29 ADAM23 (ENSOCUG00000010659) #31 DYTN (ENSOCUG00000021490) #32 MDH1B (ENSOCUG00000010506) #33 ENSOCUG00000010515 #34 CPO (ENSOCUG00000009806) #35 KLF7 (ENSOCUG00000009813) #36 ENSOCUG00000027419 CREB1 (ENSOCUG00000005427) #37 Pika MODERN SPECIES 3694 PARD3B (ENSOPRG00000010812) #22 ENSOPRG00000010848 NRP2 (ENSOPRG00000010856) #23 Tree shrew MODERN SPECIES 653 PARD3B (ENSTBEG00000002494) #22 ENSTBEG00000004230 NRP2 (ENSTBEG00000004603) #23 Laurasiatheria ANCESTRAL SPECIES 12 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Eulipotyphla ANCESTRAL SPECIES 1829 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 Hedgehog MODERN SPECIES 1794 PARD3B (ENSEEUG00000000546) #22 ENSEEUG00000000573 Common shrew MODERN SPECIES 1244 PARD3B (ENSSARG00000010690) #22 NRP2 (ENSSARG00000010738) #23 Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00940000153064.b.d ENSGT01050000244818.s.a ENSGT01090000260046 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Equus ANCESTRAL SPECIES 18 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT01090000263468 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.g.b.b ##26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.a.b Horse MODERN SPECIES 9 SUMO1 (ENSECAG00000024693) #8 NOP58 (ENSECAG00000024696) #9 BMPR2 (ENSECAG00000025141) #10 ENSECAG00000054476 FAM117B (ENSECAG00000004249) #11 ICA1L (ENSECAG00000009288) #12 WDR12 (ENSECAG00000009547) #13 CARF (ENSECAG00000017624) #14 NBEAL1 (ENSECAG00000020049) #15 CYP20A1 (ENSECAG00000010884) #16 ABI2 (ENSECAG00000018236) #18 ENSECAG00000022376 #19 CD28 (ENSECAG00000022853) #20 CTLA4 (ENSECAG00000003996) #21 ICOS (ENSECAG00000006253) PARD3B (ENSECAG00000008768) #22 NRP2 (ENSECAG00000016824) #23 INO80D (ENSECAG00000015076) #24 NDUFS1 (ENSECAG00000015914) #25 EEF1B2 (ENSECAG00000016653) ##26 CMKLR2 (ENSECAG00000004408) #27 ZDBF2 (ENSECAG00000039959) #29 ADAM23 (ENSECAG00000018514) #31 FAM237A (ENSECAG00000050449) DYTN (ENSECAG00000006820) #32 MDH1B (ENSECAG00000007491) #33 FASTKD2 (ENSECAG00000008822) #34 KLF7 (ENSECAG00000012215) #36 CREB1 (ENSECAG00000013667) #37 METTL21A (ENSECAG00000017536) PLEKHM3 (ENSECAG00000008108) Donkey MODERN SPECIES 24 ENSEASG00005035566 ENSEASG00005028104 BMPR2 (ENSEASG00005002457) #10 FAM117B (ENSEASG00005031822) #11 ICA1L (ENSEASG00005002554) #12 ENSEASG00005027147 #12 WDR12 (ENSEASG00005002567) #13 CARF (ENSEASG00005002591) #14 NBEAL1 (ENSEASG00005002684) #15 CYP20A1 (ENSEASG00005002770) #16 ABI2 (ENSEASG00005002778) #18 ENSEASG00005002800 #19 CD28 (ENSEASG00005002842) #20 CTLA4 (ENSEASG00005002849) #21 ICOS (ENSEASG00005002854) PARD3B (ENSEASG00005002870) #22 NRP2 (ENSEASG00005002875) #23 INO80D (ENSEASG00005002880) #24 NDUFS1 (ENSEASG00005002883) #25 EEF1B2 (ENSEASG00005026194) ##26 CMKLR2 (ENSEASG00005002916) #27 ZDBF2 (ENSEASG00005023969) #29 ADAM23 (ENSEASG00005002928) #31 FAM237A (ENSEASG00005002935) DYTN (ENSEASG00005002938) #32 MDH1B (ENSEASG00005002948) #33 FASTKD2 (ENSEASG00005002958) #34 KLF7 (ENSEASG00005002973) #36 CREB1 (ENSEASG00005002983) #37 ENSEASG00005024979 CCNYL1 (ENSEASG00005003014) Chiroptera ANCESTRAL SPECIES 11 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Megabat MODERN SPECIES 89 PARD3B (ENSPVAG00000003788) #22 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Greater horseshoe bat MODERN SPECIES 26 SUMO1 (ENSRFEG00010014996) #8 NOP58 (ENSRFEG00010014939) #9 RPL39_1 (ENSRFEG00010014922) BMPR2 (ENSRFEG00010014707) #10 FAM117B (ENSRFEG00010014554) #11 ICA1L (ENSRFEG00010014466) #12 WDR12 (ENSRFEG00010014405) #13 CARF (ENSRFEG00010013855) #14 NBEAL1 (ENSRFEG00010013724) #15 CYP20A1 (ENSRFEG00010013600) #16 ABI2 (ENSRFEG00010013372) #18 RAPH1 (ENSRFEG00010013239) #19 CD28 (ENSRFEG00010013138) #20 ENSRFEG00010013108 #21 ICOS (ENSRFEG00010013045) PARD3B (ENSRFEG00010012777) #22 NRP2 (ENSRFEG00010012560) #23 INO80D (ENSRFEG00010012508) #24 NDUFS1 (ENSRFEG00010011973) #25 EEF1B2 (ENSRFEG00010011873) #26 CMKLR2 (ENSRFEG00010011856) #27 ENSRFEG00010011751 #29 ADAM23 (ENSRFEG00010010998) #31 FAM237A (ENSRFEG00010010918) DYTN (ENSRFEG00010010740) #32 MDH1B (ENSRFEG00010010537) #33 FASTKD2 (ENSRFEG00010010475) #34 CPO (ENSRFEG00010010427) #35 KLF7 (ENSRFEG00010010310) #36 CREB1 (ENSRFEG00010020193) #37 ENSRFEG00010020167 Microbat DUPLICATION Microbat DUPLICATION Microbat DUPLICATION Microbat MODERN SPECIES 940 ENSMLUG00000015108 ENSMLUG00000016762 ENSMLUG00000022794 ICA1L (ENSMLUG00000002746) #12 WDR12 (ENSMLUG00000025847) #13 CARF (ENSMLUG00000007015) #14 NBEAL1 (ENSMLUG00000007434) #15 CYP20A1 (ENSMLUG00000014996) #16 ABI2 (ENSMLUG00000008117) #18 RAPH1 (ENSMLUG00000008162) #19 CD28 (ENSMLUG00000004329) #20 CTLA4 (ENSMLUG00000009619) #21 ICOS (ENSMLUG00000009627) ENSMLUG00000024002 ENSMLUG00000025717 #22 ENSMLUG00000013841 #22 ENSMLUG00000026514 ENSMLUG00000022709 #22 ENSMLUG00000028553 #22 NRP2 (ENSMLUG00000013862) #23 INO80D (ENSMLUG00000007714) #24 NDUFS1 (ENSMLUG00000016594) #25 ENSMLUG00000016602 #26 CMKLR2 (ENSMLUG00000016607) #27 ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) #29 ADAM23 (ENSMLUG00000009364) #31 FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) #32 MDH1B (ENSMLUG00000009390) #33 FASTKD2 (ENSMLUG00000009411) #34 Microbat MODERN SPECIES 940 ENSMLUG00000010834 ENSMLUG00000015108 ENSMLUG00000016762 ENSMLUG00000022794 ICA1L (ENSMLUG00000002746) #12 WDR12 (ENSMLUG00000025847) #13 CARF (ENSMLUG00000007015) #14 NBEAL1 (ENSMLUG00000007434) #15 CYP20A1 (ENSMLUG00000014996) #16 ABI2 (ENSMLUG00000008117) #18 RAPH1 (ENSMLUG00000008162) #19 CD28 (ENSMLUG00000004329) #20 CTLA4 (ENSMLUG00000009619) #21 ICOS (ENSMLUG00000009627) ENSMLUG00000024002 ENSMLUG00000025717 #22 ENSMLUG00000013841 #22 ENSMLUG00000026514 ENSMLUG00000022709 #22 ENSMLUG00000028553 #22 NRP2 (ENSMLUG00000013862) #23 INO80D (ENSMLUG00000007714) #24 NDUFS1 (ENSMLUG00000016594) #25 ENSMLUG00000016602 #26 CMKLR2 (ENSMLUG00000016607) #27 ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) #29 ADAM23 (ENSMLUG00000009364) #31 FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) #32 MDH1B (ENSMLUG00000009390) #33 Microbat MODERN SPECIES 940 ENSMLUG00000022794 ICA1L (ENSMLUG00000002746) #12 WDR12 (ENSMLUG00000025847) #13 CARF (ENSMLUG00000007015) #14 NBEAL1 (ENSMLUG00000007434) #15 CYP20A1 (ENSMLUG00000014996) #16 ABI2 (ENSMLUG00000008117) #18 RAPH1 (ENSMLUG00000008162) #19 CD28 (ENSMLUG00000004329) #20 CTLA4 (ENSMLUG00000009619) #21 ICOS (ENSMLUG00000009627) ENSMLUG00000024002 ENSMLUG00000025717 #22 ENSMLUG00000013841 #22 ENSMLUG00000026514 ENSMLUG00000022709 #22 ENSMLUG00000028553 #22 NRP2 (ENSMLUG00000013862) #23 INO80D (ENSMLUG00000007714) #24 NDUFS1 (ENSMLUG00000016594) #25 ENSMLUG00000016602 #26 CMKLR2 (ENSMLUG00000016607) #27 ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) #29 ADAM23 (ENSMLUG00000009364) #31 FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) #32 MDH1B (ENSMLUG00000009390) #33 FASTKD2 (ENSMLUG00000009411) #34 CPO (ENSMLUG00000009428) #35 KLF7 (ENSMLUG00000009436) #36 Microbat MODERN SPECIES 940 ICA1L (ENSMLUG00000002746) #12 WDR12 (ENSMLUG00000025847) #13 CARF (ENSMLUG00000007015) #14 NBEAL1 (ENSMLUG00000007434) #15 CYP20A1 (ENSMLUG00000014996) #16 ABI2 (ENSMLUG00000008117) #18 RAPH1 (ENSMLUG00000008162) #19 CD28 (ENSMLUG00000004329) #20 CTLA4 (ENSMLUG00000009619) #21 ICOS (ENSMLUG00000009627) ENSMLUG00000024002 ENSMLUG00000025717 #22 ENSMLUG00000013841 #22 ENSMLUG00000026514 ENSMLUG00000022709 #22 ENSMLUG00000028553 #22 NRP2 (ENSMLUG00000013862) #23 INO80D (ENSMLUG00000007714) #24 NDUFS1 (ENSMLUG00000016594) #25 ENSMLUG00000016602 #26 CMKLR2 (ENSMLUG00000016607) #27 ENSMLUG00000023597 ZDBF2 (ENSMLUG00000014265) #29 ADAM23 (ENSMLUG00000009364) #31 FAM237A (ENSMLUG00000030140) DYTN (ENSMLUG00000028179) #32 MDH1B (ENSMLUG00000009390) #33 FASTKD2 (ENSMLUG00000009411) #34 CPO (ENSMLUG00000009428) #35 KLF7 (ENSMLUG00000009436) #36 CREB1 (ENSMLUG00000016119) #37 Carnivora ANCESTRAL SPECIES 17 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a ENSGT00530000063873.A #20 ENSGT01090000260046 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Felidae ANCESTRAL SPECIES 15 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.o #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Panthera ANCESTRAL SPECIES 9 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.o #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Tiger MODERN SPECIES 313 NOP58 (ENSPTIG00000013131) #9 BMPR2 (ENSPTIG00000013082) #10 ENSPTIG00000008227 #11 ICA1L (ENSPTIG00000013050) #12 WDR12 (ENSPTIG00000013035) #13 CARF (ENSPTIG00000012946) #14 ENSPTIG00000008218 NBEAL1 (ENSPTIG00000012887) #15 CYP20A1 (ENSPTIG00000012850) #16 ABI2 (ENSPTIG00000012734) #18 ENSPTIG00000012473 #19 CD28 (ENSPTIG00000012428) #20 CTLA4 (ENSPTIG00000012408) #21 ICOS (ENSPTIG00000012385) ENSPTIG00000008211 PARD3B (ENSPTIG00000012297) #22 NRP2 (ENSPTIG00000012139) #23 INO80D (ENSPTIG00000012089) #24 NDUFS1 (ENSPTIG00000012021) #25 ENSPTIG00000011994 #26 CMKLR2 (ENSPTIG00000008203) #27 ADAM23 (ENSPTIG00000011931) #31 FAM237A (ENSPTIG00000011920) DYTN (ENSPTIG00000011914) #32 MDH1B (ENSPTIG00000011902) #33 FASTKD2 (ENSPTIG00000011891) #34 CPO (ENSPTIG00000011884) #35 KLF7 (ENSPTIG00000011869) #36 CREB1 (ENSPTIG00000011848) #37 METTL21A (ENSPTIG00000011823) ENSPTIG00000011797 Panthera_a ANCESTRAL SPECIES 6 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00520000059926.a.b ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.o #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 lion MODERN SPECIES 8 ENSPLOG00000012052 #8 NOP58 (ENSPLOG00000011950) #9 BMPR2 (ENSPLOG00000011747) #10 FAM117B (ENSPLOG00000011690) #11 ICA1L (ENSPLOG00000011556) #12 WDR12 (ENSPLOG00000011514) #13 CARF (ENSPLOG00000011224) #14 NBEAL1 (ENSPLOG00000010825) #15 CYP20A1 (ENSPLOG00000010756) #16 ABI2 (ENSPLOG00000010377) #18 ENSPLOG00000010151 #19 CD28 (ENSPLOG00000010049) #20 CTLA4 (ENSPLOG00000010005) #21 ICOS (ENSPLOG00000009959) ENSPLOG00000009936 PARD3B (ENSPLOG00000008780) #22 NRP2 (ENSPLOG00000008415) #23 INO80D (ENSPLOG00000008354) #24 NDUFS1 (ENSPLOG00000008138) #25 ENSPLOG00000008015 ENSPLOG00000007981 #26 CMKLR2 (ENSPLOG00000007963) #27 ZDBF2 (ENSPLOG00000007898) #29 ENSPLOG00000007877 ADAM23 (ENSPLOG00000007574) #31 FAM237A (ENSPLOG00000007523) DYTN (ENSPLOG00000007459) #32 MDH1B (ENSPLOG00000007375) #33 FASTKD2 (ENSPLOG00000007345) #34 CPO (ENSPLOG00000007242) #35 KLF7 (ENSPLOG00000007130) #36 leopard MODERN SPECIES 12 NBEAL1 (ENSPPRG00000024650) #15 CYP20A1 (ENSPPRG00000024582) #16 ABI2 (ENSPPRG00000024330) #18 ENSPPRG00000023758 #19 CD28 (ENSPPRG00000023378) #20 CTLA4 (ENSPPRG00000023337) #21 ICOS (ENSPPRG00000023149) ENSPPRG00000020852 PARD3B (ENSPPRG00000001193) #22 NRP2 (ENSPPRG00000001684) #23 INO80D (ENSPPRG00000001843) #24 NDUFS1 (ENSPPRG00000003837) #25 ENSPPRG00000004175 #26 CMKLR2 (ENSPPRG00000020893) #27 ADAM23 (ENSPPRG00000004864) #31 FAM237A (ENSPPRG00000005451) DYTN (ENSPPRG00000005491) #32 MDH1B (ENSPPRG00000005932) #33 FASTKD2 (ENSPPRG00000006075) #34 CPO (ENSPPRG00000006106) #35 KLF7 (ENSPPRG00000006377) #36 CREB1 (ENSPPRG00000006712) #37 METTL21A (ENSPPRG00000006796) ENSPPRG00000007043 Cat MODERN SPECIES 239 BMPR2 (ENSFCAG00000014094) #10 FAM117B (ENSFCAG00000046269) #11 ICA1L (ENSFCAG00000008514) #12 WDR12 (ENSFCAG00000026676) #13 CARF (ENSFCAG00000046458) #14 NBEAL1 (ENSFCAG00000025997) #15 ENSFCAG00000027770 ENSFCAG00000048141 CYP20A1 (ENSFCAG00000022927) #16 ABI2 (ENSFCAG00000012982) #18 RAPH1 (ENSFCAG00000019050) #19 ENSFCAG00000034107 CD28 (ENSFCAG00000014271) #20 CTLA4 (ENSFCAG00000014272) #21 ICOS (ENSFCAG00000038001) PARD3B (ENSFCAG00000025870) #22 NRP2 (ENSFCAG00000000423) #23 INO80D (ENSFCAG00000022035) #24 NDUFS1 (ENSFCAG00000023344) #25 EEF1B2 (ENSFCAG00000010239) #26 CMKLR2 (ENSFCAG00000028762) #27 ZDBF2 (ENSFCAG00000041779) #29 ADAM23 (ENSFCAG00000018551) #31 DYTN (ENSFCAG00000024422) #32 MDH1B (ENSFCAG00000015372) #33 FASTKD2 (ENSFCAG00000015373) #34 CPO (ENSFCAG00000002513) #35 KLF7 (ENSFCAG00000002514) #36 CREB1 (ENSFCAG00000008220) #37 METTL21A (ENSFCAG00000035900) CCNYL1 (ENSFCAG00000028003) Caniformia ANCESTRAL SPECIES 14 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a ENSGT00530000063873.A #20 ENSGT01090000260046 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Canidae ANCESTRAL SPECIES 20 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT01090000260046.e.a.a.b ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.q #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Canis_lupus ANCESTRAL SPECIES 32 ENSGT00940000154319.v.kb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000154694.l.b.b.a.a.b ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.q #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Dog MODERN SPECIES 30 ICA1L (ENSCAFG00845015647) #12 WDR12 (ENSCAFG00845015685) #13 CARF (ENSCAFG00845015868) #14 ENSCAFG00845016161 NBEAL1 (ENSCAFG00845016248) #15 CYP20A1 (ENSCAFG00845016438) #16 ENSCAFG00845016541 ABI2 (ENSCAFG00845016661) #18 ENSCAFG00845016782 ENSCAFG00845016818 ##17 RAPH1 (ENSCAFG00845017225) #19 ENSCAFG00845017896 CD28 (ENSCAFG00845018097) #20 CTLA4 (ENSCAFG00845018252) #21 ICOS (ENSCAFG00845018403) PARD3B (ENSCAFG00845018916) #22 NRP2 (ENSCAFG00845019968) #23 INO80D (ENSCAFG00845020375) #24 NDUFS1 (ENSCAFG00845020511) #25 EEF1B2 (ENSCAFG00845020822) #26 GPR1 (ENSCAFG00845020895) #27 ZDBF2 (ENSCAFG00845020911) #29 ADAM23 (ENSCAFG00845021040) #31 FAM237A (ENSCAFG00845021430) DYTN (ENSCAFG00845021457) #32 MDH1B (ENSCAFG00845021551) #33 FASTKD2 (ENSCAFG00845021685) #34 CPO (ENSCAFG00845021788) #35 KLF7 (ENSCAFG00845021900) #36 CREB1 (ENSCAFG00845022020) #37 METTL21A (ENSCAFG00845022171) Dingo MODERN SPECIES 398 BMPR2 (ENSCAFG00020002138) #10 FAM117B (ENSCAFG00020002101) #11 ICA1L (ENSCAFG00020002040) #12 WDR12 (ENSCAFG00020001958) #13 CARF (ENSCAFG00020001932) #14 ENSCAFG00020001912 NBEAL1 (ENSCAFG00020001831) #15 CYP20A1 (ENSCAFG00020001812) #16 ENSCAFG00020001801 ENSCAFG00020001784 ABI2 (ENSCAFG00020001752) #18 RAPH1 (ENSCAFG00020001630) #19 CD28 (ENSCAFG00020001531) #20 CTLA4 (ENSCAFG00020001506) #21 ICOS (ENSCAFG00020001489) PARD3B (ENSCAFG00020001089) #22 NRP2 (ENSCAFG00020000746) #23 INO80D (ENSCAFG00020000661) #24 NDUFS1 (ENSCAFG00020000642) #25 EEF1B2 (ENSCAFG00020000617) #26 CMKLR2 (ENSCAFG00020000614) #27 ZDBF2 (ENSCAFG00020000545) #29 ADAM23 (ENSCAFG00020000240) #31 FAM237A (ENSCAFG00020000156) DYTN (ENSCAFG00020027434) #32 MDH1B (ENSCAFG00020027429) #33 FASTKD2 (ENSCAFG00020027426) #34 CPO (ENSCAFG00020027425) #35 KLF7 (ENSCAFG00020027423) #36 CREB1 (ENSCAFG00020027420) #37 METTL21A (ENSCAFG00020027418) Red fox MODERN SPECIES 41 ENSVVUG00000018231 #11 ICA1L (ENSVVUG00000018171) #12 WDR12 (ENSVVUG00000018074) #13 CARF (ENSVVUG00000017926) #14 ENSVVUG00000017885 #15 NBEAL1 (ENSVVUG00000017646) #15 CYP20A1 (ENSVVUG00000017336) #16 ENSVVUG00000017318 ENSVVUG00000017315 ##17 ABI2 (ENSVVUG00000017312) #18 RAPH1 (ENSVVUG00000017063) #19 CD28 (ENSVVUG00000017013) #20 ENSVVUG00000017012 CTLA4 (ENSVVUG00000017009) #21 ICOS (ENSVVUG00000017004) PARD3B (ENSVVUG00000016975) #22 NRP2 (ENSVVUG00000016946) #23 INO80D (ENSVVUG00000016931) #24 NDUFS1 (ENSVVUG00000016918) #25 EEF1B2 (ENSVVUG00000016896) #26 GPR1 (ENSVVUG00000016890) #27 ZDBF2 (ENSVVUG00000016880) #29 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Mustelinae ANCESTRAL SPECIES 44 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 American mink MODERN SPECIES 40 NOP58 (ENSNVIG00000007538) #9 BMPR2 (ENSNVIG00000007469) #10 ENSNVIG00000007447 #11 ENSNVIG00000007441 #11 ICA1L (ENSNVIG00000007376) #12 WDR12 (ENSNVIG00000007326) #13 F6SXV3 (ENSNVIG00000007220) #14 NBEAL1 (ENSNVIG00000007140) #15 CYP20A1 (ENSNVIG00000007093) #16 ABI2 (ENSNVIG00000006920) #18 RAPH1 (ENSNVIG00000006475) #19 ENSNVIG00000006462 CD28 (ENSNVIG00000006426) #20 CTLA4 (ENSNVIG00000006392) #21 ICOS (ENSNVIG00000006380) PARD3B (ENSNVIG00000005889) #22 NRP2 (ENSNVIG00000005651) #23 INO80D (ENSNVIG00000005634) #24 NDUFS1 (ENSNVIG00000005404) #25 EEF1B2 (ENSNVIG00000005362) #26 GPR1 (ENSNVIG00000005355) #27 ZDBF2 (ENSNVIG00000005326) #29 ADAM23 (ENSNVIG00000005209) #31 FAM237A (ENSNVIG00000005198) DYTN (ENSNVIG00000005190) #32 MDH1B (ENSNVIG00000005145) #33 FASTKD2 (ENSNVIG00000005116) #34 CBPO (ENSNVIG00000005106) #35 KLF7 (ENSNVIG00000005091) #36 CREB1 (ENSNVIG00000005058) #37 METTL21A (ENSNVIG00000005027) Ferret MODERN SPECIES 265 BMPR2 (ENSMPUG00000000354) #10 FAM117B (ENSMPUG00000000358) #11 ICA1L (ENSMPUG00000000375) #12 WDR12 (ENSMPUG00000000379) #13 CARF (ENSMPUG00000000382) #14 NBEAL1 (ENSMPUG00000000385) #15 ENSMPUG00000000395 #16 ENSMPUG00000000397 #16 ABI2 (ENSMPUG00000000402) #18 RAPH1 (ENSMPUG00000000405) #19 CD28 (ENSMPUG00000000418) #20 CTLA4 (ENSMPUG00000000422) #21 ICOS (ENSMPUG00000000425) ENSMPUG00000000428 ENSMPUG00000000430 ##22 PARD3B (ENSMPUG00000000432) #22 NRP2 (ENSMPUG00000000435) #23 ENSMPUG00000000437 INO80D (ENSMPUG00000000439) #24 NDUFS1 (ENSMPUG00000000442) #25 EEF1B2 (ENSMPUG00000000444) #26 CMKLR2 (ENSMPUG00000018909) #27 ZDBF2 (ENSMPUG00000000463) #29 ADAM23 (ENSMPUG00000000467) #31 ENSMPUG00000000471 MDH1B (ENSMPUG00000000473) #33 FASTKD2 (ENSMPUG00000000477) #34 CPO (ENSMPUG00000000481) #35 KLF7 (ENSMPUG00000000483) #36 CREB1 (ENSMPUG00000000485) #37 ENSMPUG00000018911 Ursidae ANCESTRAL SPECIES 7 ENSGT00950000183314.b ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a.k ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Giant Panda MODERN SPECIES 11 ENSAMEG00000030387 BMPR2 (ENSAMEG00000013148) #10 ENSAMEG00000013132 #11 ENSAMEG00000026389 #11 ICA1L (ENSAMEG00000013120) #12 WDR12 (ENSAMEG00000013091) #13 CARF (ENSAMEG00000013068) #14 NBEAL1 (ENSAMEG00000013020) #15 ABI2 (ENSAMEG00000012960) #18 ENSAMEG00000002970 #19 ENSAMEG00000030945 ENSAMEG00000028551 CD28 (ENSAMEG00000002955) #20 CTLA4 (ENSAMEG00000002942) #21 ICOS (ENSAMEG00000002936) PARD3B (ENSAMEG00000002930) #22 NRP2 (ENSAMEG00000003086) #23 INO80D (ENSAMEG00000003072) #24 NDUFS1 (ENSAMEG00000003030) #25 ENSAMEG00000003015 #26 ZDBF2 (ENSAMEG00000029468) #29 CMKLR2 (ENSAMEG00000003011) #27 ADAM23 (ENSAMEG00000002950) #31 FAM237A (ENSAMEG00000029073) DYTN (ENSAMEG00000025472) #32 MDH1B (ENSAMEG00000002932) #33 FASTKD2 (ENSAMEG00000002917) #34 CPO (ENSAMEG00000015096) #35 KLF7 (ENSAMEG00000015148) #36 CREB1 (ENSAMEG00000015152) #37 METTL21A (ENSAMEG00000015168) Ursus ANCESTRAL SPECIES 4 ENSGT00950000183314.b ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00940000157820.a.a.k ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00910000148124 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Polar bear MODERN SPECIES 142 BMPR2 (ENSUMAG00000021888) #10 ENSUMAG00000021893 #11 ENSUMAG00000021898 #11 ICA1L (ENSUMAG00000021899) #12 WDR12 (ENSUMAG00000021904) #13 CARF (ENSUMAG00000021907) #14 ENSUMAG00000021909 #15 NBEAL1 (ENSUMAG00000021925) #15 CYP20A1 (ENSUMAG00000022062) #16 ABI2 (ENSUMAG00000022146) #18 RAPH1 (ENSUMAG00000022157) #19 ENSUMAG00000022213 CD28 (ENSUMAG00000022222) #20 CTLA4 (ENSUMAG00000022223) #21 ICOS (ENSUMAG00000022228) PARD3B (ENSUMAG00000022273) #22 NRP2 (ENSUMAG00000022446) #23 ENSUMAG00000022452 INO80D (ENSUMAG00000022462) #24 NDUFS1 (ENSUMAG00000022473) #25 EEF1B2 (ENSUMAG00000022481) #26 ZDBF2 (ENSUMAG00000022505) #29 ADAM23 (ENSUMAG00000022533) #31 FAM237A (ENSUMAG00000022571) DYTN (ENSUMAG00000022576) #32 MDH1B (ENSUMAG00000022585) #33 FASTKD2 (ENSUMAG00000022590) #34 CPO (ENSUMAG00000022606) #35 KLF7 (ENSUMAG00000022629) #36 METTL21A (ENSUMAG00000022649) CREB1 (ENSUMAG00000022656) #37 American black bear DUPLICATION American black bear MODERN SPECIES 4654 ENSUAMG00000023059 #22 American black bear MODERN SPECIES 864 PARD3B (ENSUAMG00000028379) #22 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Suina ANCESTRAL SPECIES 3 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Pig MODERN SPECIES 6 SUMO1 (ENSSSCG00000035842) #8 NOP58 (ENSSSCG00000022225) #9 BMPR2 (ENSSSCG00000016113) #10 FAM117B (ENSSSCG00000016114) #11 ENSSSCG00000043400 ICA1L (ENSSSCG00000016115) #12 WDR12 (ENSSSCG00000016116) #13 CARF (ENSSSCG00000016117) #14 NBEAL1 (ENSSSCG00000016118) #15 CYP20A1 (ENSSSCG00000055761) #16 ABI2 (ENSSSCG00000034630) #18 ENSSSCG00000016119 #19 CD28 (ENSSSCG00000028561) #20 CTLA4 (ENSSSCG00000016122) #21 ICOS (ENSSSCG00000025042) PARD3B (ENSSSCG00000016123) #22 ENSSSCG00000055400 NRP2 (ENSSSCG00000026383) #23 INO80D (ENSSSCG00000016125) #24 NDUFS1 (ENSSSCG00000016127) #25 EEF1B2 (ENSSSCG00000016128) #26 CMKLR2 (ENSSSCG00000016129) #27 ZDBF2 (ENSSSCG00000016130) #29 ADAM23 (ENSSSCG00000016131) #31 FAM237A (ENSSSCG00000036691) DYTN (ENSSSCG00000035158) #32 MDH1B (ENSSSCG00000016133) #33 FASTKD2 (ENSSSCG00000016134) #34 CPO (ENSSSCG00000016135) #35 KLF7 (ENSSSCG00000029998) #36 ENSSSCG00000042730 Chacoan peccary MODERN SPECIES 91 KIAA2012 (ENSCWAG00000016603) #7 SUMO1 (ENSCWAG00000016775) #8 NOP58 (ENSCWAG00000016884) #9 BMPR2 (ENSCWAG00000016944) #10 FAM117B (ENSCWAG00000017046) #11 ICA1L (ENSCWAG00000017108) #12 WDR12 (ENSCWAG00000017209) #13 CARF (ENSCWAG00000017264) #14 NBEAL1 (ENSCWAG00000017563) #15 CYP20A1 (ENSCWAG00000017608) #16 ABI2 (ENSCWAG00000017671) #18 RAPH1 (ENSCWAG00000018090) #19 CD28 (ENSCWAG00000020352) #20 CTLA4 (ENSCWAG00000020380) #21 ICOS (ENSCWAG00000020408) PARD3B (ENSCWAG00000020460) #22 NRP2 (ENSCWAG00000020581) #23 INO80D (ENSCWAG00000020612) #24 ENSCWAG00000020619 NDUFS1 (ENSCWAG00000020647) #25 EEF1B2 (ENSCWAG00000020782) #26 CMKLR2 (ENSCWAG00000020796) #27 ENSCWAG00000020804 #29 ENSCWAG00000020821 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Camelidae ANCESTRAL SPECIES 58 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Alpaca MODERN SPECIES 2771 BMPR2 (ENSVPAG00000009496) #10 ENSVPAG00000009497 #11 ICA1L (ENSVPAG00000009498) #12 WDR12 (ENSVPAG00000009500) #13 CARF (ENSVPAG00000009501) #14 ENSVPAG00000009502 #15 ENSVPAG00000009503 #15 CYP20A1 (ENSVPAG00000009505) #16 ABI2 (ENSVPAG00000009506) #18 RAPH1 (ENSVPAG00000009507) #19 CD28 (ENSVPAG00000009510) #20 ICOS (ENSVPAG00000009512) PARD3B (ENSVPAG00000009514) #22 ENSVPAG00000009518 #23 Arabian camel MODERN SPECIES 31 SUMO1 (ENSCDRG00005019446) #8 NOP58 (ENSCDRG00005019373) #9 ENSCDRG00005019360 BMPR2 (ENSCDRG00005019320) #10 ENSCDRG00005019289 #11 ENSCDRG00005019283 #11 ICA1L (ENSCDRG00005019255) #12 WDR12 (ENSCDRG00005019221) #13 CARF (ENSCDRG00005019098) #14 NBEAL1 (ENSCDRG00005019031) #15 ABI2 (ENSCDRG00005018744) #18 ENSCDRG00005018577 #19 CD28 (ENSCDRG00005018484) #20 CTLA4 (ENSCDRG00005018448) #21 ICOS (ENSCDRG00005018420) PARD3B (ENSCDRG00005018074) #22 NRP2 (ENSCDRG00005017938) #23 INO80D (ENSCDRG00005017847) #24 NDUFS1 (ENSCDRG00005017509) #25 EEF1B2 (ENSCDRG00005017418) #26 CMKLR2 (ENSCDRG00005017405) #27 ZDBF2 (ENSCDRG00005017378) #29 ADAM23 (ENSCDRG00005016801) #31 FAM237A (ENSCDRG00005016730) DYTN (ENSCDRG00005016665) #32 MDH1B (ENSCDRG00005016545) #33 FASTKD2 (ENSCDRG00005016506) #34 CPO (ENSCDRG00005016423) #35 KLF7 (ENSCDRG00005016375) #36 CREB1 (ENSCDRG00005016249) #37 METTL21A (ENSCDRG00005016143) Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Cetacea ANCESTRAL SPECIES 14 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00390000001958.n.a.g Odontoceti ANCESTRAL SPECIES 13 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00390000001958.n.a.g Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00390000001958.n.a.g Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00960000190610 ENSGT00440000037606.b #29 ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00950000183010.a.b.a.a.b ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00960000190610 ENSGT00440000037606.b #29 ENSGT00910000144184.r.a.a.a.a ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Narwhal MODERN SPECIES 302 BMPR2 (ENSMMNG00015007390) #10 FAM117B (ENSMMNG00015007345) #11 ICA1L (ENSMMNG00015007312) #12 WDR12 (ENSMMNG00015007273) #13 CARF (ENSMMNG00015007132) #14 NBEAL1 (ENSMMNG00015007045) #15 CYP20A1 (ENSMMNG00015007001) #16 ABI2 (ENSMMNG00015006963) #18 RAPH1 (ENSMMNG00015006494) #19 ENSMMNG00015006290 CD28 (ENSMMNG00015006278) #20 CTLA4 (ENSMMNG00015006260) #21 ICOS (ENSMMNG00015006232) ENSMMNG00015006206 ENSMMNG00015006192 PARD3B (ENSMMNG00015005987) #22 NRP2 (ENSMMNG00015005855) #23 INO80D (ENSMMNG00015005802) #24 NDUFS1 (ENSMMNG00015005695) #25 EEF1B2 (ENSMMNG00015005617) #26 CMKLR2 (ENSMMNG00015005602) #27 ENSMMNG00015005593 ZDBF2 (ENSMMNG00015005582) #29 ENSMMNG00015005570 ADAM23 (ENSMMNG00015005478) #31 FAM237A (ENSMMNG00015005439) DYTN (ENSMMNG00015005422) #32 MDH1B (ENSMMNG00015005351) #33 FASTKD2 (ENSMMNG00015005336) #34 KLF7 (ENSMMNG00015005320) #36 CREB1 (ENSMMNG00015005293) #37 Beluga whale MODERN SPECIES 84 FAM117B (ENSDLEG00000018310) #11 ICA1L (ENSDLEG00000018321) #12 WDR12 (ENSDLEG00000018347) #13 CARF (ENSDLEG00000018361) #14 NBEAL1 (ENSDLEG00000018755) #15 ENSDLEG00000020428 #18 ENSDLEG00000008100 #18 RAPH1 (ENSDLEG00000008223) #19 ENSDLEG00000008980 ENSDLEG00000009004 #20 CTLA4 (ENSDLEG00000009020) #21 ICOS (ENSDLEG00000009050) ENSDLEG00000009073 ENSDLEG00000009090 ENSDLEG00000009108 PARD3B (ENSDLEG00000009127) #22 NRP2 (ENSDLEG00000009192) #23 INO80D (ENSDLEG00000009298) #24 NDUFS1 (ENSDLEG00000009340) #25 EEF1B2 (ENSDLEG00000009390) #26 GPR1 (ENSDLEG00000009434) #27 ENSDLEG00000009440 ZDBF2 (ENSDLEG00000009453) #29 ADAM23 (ENSDLEG00000009497) #31 FAM237A (ENSDLEG00000009620) DYTN (ENSDLEG00000009655) #32 MDH1B (ENSDLEG00000009773) #33 FASTKD2 (ENSDLEG00000009822) #34 KLF7 (ENSDLEG00000009871) #36 CREB1 (ENSDLEG00000009895) #37 METTL21A (ENSDLEG00000009925) Vaquita MODERN SPECIES 18 KIAA2012 (ENSPSNG00000013027) #7 SUMO1 (ENSPSNG00000012848) #8 NOP58 (ENSPSNG00000012735) #9 BMPR2 (ENSPSNG00000012669) #10 FAM117B (ENSPSNG00000012551) #11 ICA1L (ENSPSNG00000012492) #12 WDR12 (ENSPSNG00000012441) #13 CARF (ENSPSNG00000011886) #14 NBEAL1 (ENSPSNG00000011649) #15 CYP20A1 (ENSPSNG00000011532) #16 ABI2 (ENSPSNG00000011330) #18 RAPH1 (ENSPSNG00000009801) #19 ENSPSNG00000009309 #20 CTLA4 (ENSPSNG00000009249) #21 ICOS (ENSPSNG00000009099) PARD3B (ENSPSNG00000008898) #22 NRP2 (ENSPSNG00000008707) #23 ENSPSNG00000008614 INO80D (ENSPSNG00000008590) #24 NDUFS1 (ENSPSNG00000008252) #25 EEF1B2 (ENSPSNG00000008153) #26 CMKLR2 (ENSPSNG00000008130) #27 ENSPSNG00000008115 ZDBF2 (ENSPSNG00000008096) #29 ENSPSNG00000008082 ADAM23 (ENSPSNG00000007702) #31 FAM237A (ENSPSNG00000022142) DYTN (ENSPSNG00000022128) #32 MDH1B (ENSPSNG00000022108) #33 FASTKD2 (ENSPSNG00000022088) #34 KLF7 (ENSPSNG00000022054) #36 Dolphin MODERN SPECIES 3567 PARD3B (ENSTTRG00000014486) #22 Sperm whale MODERN SPECIES 11 NOP58 (ENSPCTG00005003474) #9 BMPR2 (ENSPCTG00005003518) #10 FAM117B (ENSPCTG00005003547) #11 ICA1L (ENSPCTG00005003564) #12 WDR12 (ENSPCTG00005003584) #13 CARF (ENSPCTG00005003645) #14 NBEAL1 (ENSPCTG00005003780) #15 CYP20A1 (ENSPCTG00005003802) #16 ABI2 (ENSPCTG00005003833) #18 RAPH1 (ENSPCTG00005003938) #19 ENSPCTG00005005119 #20 CTLA4 (ENSPCTG00005005168) #21 ICOS (ENSPCTG00005005246) ENSPCTG00005005318 ENSPCTG00005005328 PARD3B (ENSPCTG00005005375) #22 NRP2 (ENSPCTG00005005530) #23 ENSPCTG00005006370 INO80D (ENSPCTG00005006389) #24 ENSPCTG00005006412 NDUFS1 (ENSPCTG00005006448) #25 EEF1B2 (ENSPCTG00005006746) #26 GPR1 (ENSPCTG00005006803) #27 ZDBF2 (ENSPCTG00005006840) #29 ADAM23 (ENSPCTG00005007031) #31 FAM237A (ENSPCTG00005007294) DYTN (ENSPCTG00005007310) #32 MDH1B (ENSPCTG00005007378) #33 FASTKD2 (ENSPCTG00005004965) #34 KLF7 (ENSPCTG00005005002) #36 CREB1 (ENSPCTG00005005085) #37 Blue whale MODERN SPECIES 18 BMPR2 (ENSBMSG00010006114) #10 FAM117B (ENSBMSG00010006217) #11 ICA1L (ENSBMSG00010006262) #12 WDR12 (ENSBMSG00010006329) #13 CARF (ENSBMSG00010006417) #14 ENSBMSG00010006579 #15 ENSBMSG00010006612 #15 CYP20A1 (ENSBMSG00010006657) #16 ABI2 (ENSBMSG00010006723) #18 ENSBMSG00010000193 #20 ENSBMSG00010000215 #20 ENSBMSG00010000230 ENSBMSG00010000252 ICOS (ENSBMSG00010000278) ENSBMSG00010000353 PARD3B (ENSBMSG00010000409) #22 NRP2 (ENSBMSG00010000535) #23 ENSBMSG00010001002 INO80D (ENSBMSG00010001021) #24 ENSBMSG00010001036 NDUFS1 (ENSBMSG00010001085) #25 EEF1B2 (ENSBMSG00010001199) #26 CMKLR2 (ENSBMSG00010001229) #27 ZDBF2 (ENSBMSG00010001246) #29 ADAM23 (ENSBMSG00010001305) #31 FAM237A (ENSBMSG00010001408) DYTN (ENSBMSG00010001424) #32 MDH1B (ENSBMSG00010001465) #33 FASTKD2 (ENSBMSG00010001509) #34 KLF7 (ENSBMSG00010001534) #36 CREB1 (ENSBMSG00010001606) #37 Pecora ANCESTRAL SPECIES 16 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Yarkand deer MODERN SPECIES 31 FAM117B (ENSCHYG00000003510) #11 ICA1L (ENSCHYG00000003466) #12 WDR12 (ENSCHYG00000003428) #13 ENSCHYG00000003419 CARF (ENSCHYG00000003336) #14 NBEAL1 (ENSCHYG00000003290) #15 CYP20A1 (ENSCHYG00000003265) #16 ENSCHYG00000003256 ABI2 (ENSCHYG00000003231) #18 RAPH1 (ENSCHYG00000002595) #19 CD28 (ENSCHYG00000002432) #20 CTLA4 (ENSCHYG00000002394) #21 ICOS (ENSCHYG00000002371) ENSCHYG00000002349 ENSCHYG00000002345 PARD3B (ENSCHYG00000002220) #22 NRP2 (ENSCHYG00000002124) #23 ENSCHYG00000002093 INO80D (ENSCHYG00000002072) #24 NDUFS1 (ENSCHYG00000001983) #25 ENSCHYG00000001947 #26 ENSCHYG00000001938 CMKLR2 (ENSCHYG00000001927) #27 ZDBF2 (ENSCHYG00000001897) #29 ADAM23 (ENSCHYG00000001792) #31 FAM237A (ENSCHYG00000001756) DYTN (ENSCHYG00000001729) #32 ENSCHYG00000001715 MDH1B (ENSCHYG00000001680) #33 FASTKD2 (ENSCHYG00000001648) #34 CPO (ENSCHYG00000001618) #35 Percora_a ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Siberian musk deer MODERN SPECIES 352 CD28 (ENSMMSG00000016228) #20 CTLA4 (ENSMMSG00000016291) #21 ICOS (ENSMMSG00000016369) ENSMMSG00000016441 PARD3B (ENSMMSG00000016488) #22 NRP2 (ENSMMSG00000016704) #23 INO80D (ENSMMSG00000016888) #24 NDUFS1 (ENSMMSG00000016943) #25 ENSMMSG00000017130 #26 ZDBF2 (ENSMMSG00000017183) #29 ADAM23 (ENSMMSG00000017291) #31 FAM237A (ENSMMSG00000017572) DYTN (ENSMMSG00000017587) #32 MDH1B (ENSMMSG00000017649) #33 FASTKD2 (ENSMMSG00000017717) #34 CPO (ENSMMSG00000017798) #35 KLF7 (ENSMMSG00000017874) #36 ENSMMSG00000017910 CREB1 (ENSMMSG00000017935) #37 ENSMMSG00000017981 Bovidae ANCESTRAL SPECIES 8 ENSGT00860000133854 #7 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Caprinae ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.b #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Goat MODERN SPECIES 11 ENSCHIG00000008668 #8 NOP58 (ENSCHIG00000025013) #9 BMPR2 (ENSCHIG00000020243) #10 FAM117B (ENSCHIG00000014630) #11 ICA1L (ENSCHIG00000013077) #12 WDR12 (ENSCHIG00000009469) #13 CARF (ENSCHIG00000023655) #14 ENSCHIG00000016764 NBEAL1 (ENSCHIG00000000921) #15 CYP20A1 (ENSCHIG00000022946) #16 ABI2 (ENSCHIG00000002652) #18 RAPH1 (ENSCHIG00000025930) #19 CD28 (ENSCHIG00000024564) #20 CTLA4 (ENSCHIG00000008042) #21 ICOS (ENSCHIG00000024943) PARD3B (ENSCHIG00000007723) #22 NRP2 (ENSCHIG00000016092) #23 INO80D (ENSCHIG00000010718) #24 NDUFS1 (ENSCHIG00000014971) #25 EEF1B2 (ENSCHIG00000026794) #26 CMKLR2 (ENSCHIG00000007661) #27 ZDBF2 (ENSCHIG00000022575) #29 ADAM23 (ENSCHIG00000011689) #31 FAM237A (ENSCHIG00000010865) DYTN (ENSCHIG00000016602) #32 MDH1B (ENSCHIG00000022560) #33 FASTKD2 (ENSCHIG00000015121) #34 ENSCHIG00000003872 ENSCHIG00000026347 CPO (ENSCHIG00000020644) #35 KLF7 (ENSCHIG00000006619) #36 Rambouillet Sheep MODERN SPECIES 11 SUMO1 (ENSOARG00020023283) #8 NOP58 (ENSOARG00020023408) #9 BMPR2 (ENSOARG00020006563) #10 FAM117B (ENSOARG00020006688) #11 ICA1L (ENSOARG00020006778) #12 WDR12 (ENSOARG00020006896) #13 CARF (ENSOARG00020006968) #14 NBEAL1 (ENSOARG00020007440) #15 CYP20A1 (ENSOARG00020007538) #16 ABI2 (ENSOARG00020007596) #18 RAPH1 (ENSOARG00020007863) #19 ENSOARG00020008167 CD28 (ENSOARG00020008197) #20 CTLA4 (ENSOARG00020008302) #21 ICOS (ENSOARG00020008420) PARD3B (ENSOARG00020008587) #22 NRP2 (ENSOARG00020013172) #23 ENSOARG00020013371 INO80D (ENSOARG00020013391) #24 NDUFS1 (ENSOARG00020013502) #25 ENSOARG00020014163 #26 GPR1 (ENSOARG00020014248) #27 ZDBF2 (ENSOARG00020014286) #29 ADAM23 (ENSOARG00020014405) #31 FAM237A (ENSOARG00020014982) DYTN (ENSOARG00020015031) #32 MDH1B (ENSOARG00020015160) #33 FASTKD2 (ENSOARG00020015403) #34 CPO (ENSOARG00020015466) #35 KLF7 (ENSOARG00020015555) #36 CREB1 (ENSOARG00020015664) #37 Bovinae ANCESTRAL SPECIES 5 ENSGT00860000133854 #7 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 American bison MODERN SPECIES 3330 ENSBBBG00000012202 #8 NOP58 (ENSBBBG00000012170) #9 BMPR2 (ENSBBBG00000012144) #10 ENSBBBG00000002273 #11 ENSBBBG00000012094 #11 ICA1L (ENSBBBG00000012090) #12 WDR12 (ENSBBBG00000012064) #13 CARF (ENSBBBG00000012044) #14 NBEAL1 (ENSBBBG00000011985) #15 CYP20A1 (ENSBBBG00000002236) #16 ABI2 (ENSBBBG00000011940) #18 ENSBBBG00000011830 #19 CD28 (ENSBBBG00000002157) #20 CTLA4 (ENSBBBG00000002155) #21 ICOS (ENSBBBG00000011656) PARD3B (ENSBBBG00000011555) #22 NRP2 (ENSBBBG00000011269) #23 INO80D (ENSBBBG00000011164) #24 NDUFS1 (ENSBBBG00000011148) #25 ENSBBBG00000011052 #26 CMKLR2 (ENSBBBG00000011031) #27 ZDBF2 (ENSBBBG00000011029) #29 ADAM23 (ENSBBBG00000011005) #31 FAM237A (ENSBBBG00000010954) DYTN (ENSBBBG00000010949) #32 MDH1B (ENSBBBG00000010925) #33 FASTKD2 (ENSBBBG00000010905) #34 CPO (ENSBBBG00000010898) #35 ENSBBBG00000010890 KLF7 (ENSBBBG00000010885) #36 CREB1 (ENSBBBG00000010873) #37 Bos ANCESTRAL SPECIES 6 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Bos_a ANCESTRAL SPECIES 4 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00510000047245.w.a.a.b ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Domestic yak MODERN SPECIES 11 FAM117B (ENSBGRG00000017110) #11 ICA1L (ENSBGRG00000016892) #12 WDR12 (ENSBGRG00000016744) #13 ENSBGRG00000016729 CARF (ENSBGRG00000016286) #14 ENSBGRG00000016261 NBEAL1 (ENSBGRG00000016043) #15 CYP20A1 (ENSBGRG00000015562) #16 ABI2 (ENSBGRG00000014834) #18 ENSBGRG00000012733 #19 CD28 (ENSBGRG00000012545) #20 CTLA4 (ENSBGRG00000012384) #21 ENSBGRG00000012357 ICOS (ENSBGRG00000012246) ENSBGRG00000012209 PARD3B (ENSBGRG00000011721) #22 NRP2 (ENSBGRG00000010098) #23 ENSBGRG00000010010 INO80D (ENSBGRG00000009960) #24 NDUFS1 (ENSBGRG00000009516) #25 ENSBGRG00000009445 #26 CMKLR2 (ENSBGRG00000009401) #27 ZDBF2 (ENSBGRG00000009322) #29 ENSBGRG00000009270 ADAM23 (ENSBGRG00000008490) #31 FAM237A (ENSBGRG00000008425) MDH1B (ENSBGRG00000008141) #33 FASTKD2 (ENSBGRG00000008051) #34 CPO (ENSBGRG00000007969) #35 ENSBGRG00000007943 KLF7 (ENSBGRG00000007842) #36 Wild yak DUPLICATION Wild yak MODERN SPECIES 1701 ENSBMUG00000019977 #22 NRP2 (ENSBMUG00000019949) #23 INO80D (ENSBMUG00000019906) #24 NDUFS1 (ENSBMUG00000019884) #25 ENSBMUG00000019833 #26 CMKLR2 (ENSBMUG00000019826) #27 Wild yak MODERN SPECIES 1623 ENSBMUG00000017957 NOP58 (ENSBMUG00000017992) #9 BMPR2 (ENSBMUG00000018053) #10 ENSBMUG00000018077 #11 ENSBMUG00000018084 #11 ICA1L (ENSBMUG00000018119) #12 WDR12 (ENSBMUG00000018135) #13 CARF (ENSBMUG00000018245) #14 NBEAL1 (ENSBMUG00000018435) #15 CYP20A1 (ENSBMUG00000018465) #16 ABI2 (ENSBMUG00000018557) #18 ENSBMUG00000018823 #19 CD28 (ENSBMUG00000018899) #20 CTLA4 (ENSBMUG00000018913) #21 ICOS (ENSBMUG00000018950) PARD3B (ENSBMUG00000018984) #22 Bos_b ANCESTRAL SPECIES 3 ENSGT00940000154319.v.cb #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT01100000263480.a.a.b.b.b.a.b.a.a.b.b.b.a ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT01100000263480.a.a.b.a.a.a.b.b.a.a.a.a.a.a ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h.u.a.a.b.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00510000047245.w.a.a.b ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 Hybrid Bos Indicus MODERN SPECIES 11 ENSBIXG00005031575 #8 NOP58 (ENSBIXG00005031577) #9 BMPR2 (ENSBIXG00005031582) #10 FAM117B (ENSBIXG00005031583) #11 ICA1L (ENSBIXG00005031584) #12 WDR12 (ENSBIXG00005031585) #13 CARF (ENSBIXG00005031586) #14 ENSBIXG00005031587 NBEAL1 (ENSBIXG00005031588) #15 CYP20A1 (ENSBIXG00005031589) #16 ABI2 (ENSBIXG00005031590) #18 RAPH1 (ENSBIXG00005031591) #19 CD28 (ENSBIXG00005031593) #20 CTLA4 (ENSBIXG00005031594) #21 ICOS (ENSBIXG00005031595) PARD3B (ENSBIXG00005031598) #22 ENSBIXG00005031599 NRP2 (ENSBIXG00005031600) #23 INO80D (ENSBIXG00005031603) #24 ENSBIXG00005031604 NDUFS1 (ENSBIXG00005031605) #25 ENSBIXG00005031606 #26 CMKLR2 (ENSBIXG00005031611) #27 ZDBF2 (ENSBIXG00005031612) #29 ADAM23 (ENSBIXG00005031613) #31 ENSBIXG00005031614 DYTN (ENSBIXG00005031615) #32 MDH1B (ENSBIXG00005031616) #33 FASTKD2 (ENSBIXG00005031617) #34 CPO (ENSBIXG00005031618) #35 KLF7 (ENSBIXG00005031620) #36 Cow DUPLICATION Cow MODERN SPECIES 11 ENSBTAG00000053168 CARF (ENSBTAG00000016000) #14 ENSBTAG00000019994 ##17 NBEAL1 (ENSBTAG00000014469) #15 CYP20A1 (ENSBTAG00000000851) #16 ABI2 (ENSBTAG00000011017) #18 RAPH1 (ENSBTAG00000027201) #19 CD28 (ENSBTAG00000007445) #20 ENSBTAG00000051061 CTLA4 (ENSBTAG00000013170) #21 ICOS (ENSBTAG00000021596) ENSBTAG00000040367 ENSBTAG00000051630 ENSBTAG00000049320 PARD3B (ENSBTAG00000010293) #22 ENSBTAG00000053833 #22 NRP2 (ENSBTAG00000011971) #23 INO80D (ENSBTAG00000014407) #24 ENSBTAG00000055132 NDUFS1 (ENSBTAG00000021976) #25 EEF1B2 (ENSBTAG00000021979) #26 CMKLR2 (ENSBTAG00000017043) #27 ZDBF2 (ENSBTAG00000031166) #29 ADAM23 (ENSBTAG00000019694) #31 ENSBTAG00000055316 FAM237A (ENSBTAG00000050134) DYTN (ENSBTAG00000046454) #32 MDH1B (ENSBTAG00000016192) #33 FASTKD2 (ENSBTAG00000016193) #34 CPO (ENSBTAG00000019190) #35 KLF7 (ENSBTAG00000044097) #36 Cow MODERN SPECIES 11 WDR12 (ENSBTAG00000015424) #13 ENSBTAG00000053168 CARF (ENSBTAG00000016000) #14 ENSBTAG00000019994 ##17 NBEAL1 (ENSBTAG00000014469) #15 CYP20A1 (ENSBTAG00000000851) #16 ABI2 (ENSBTAG00000011017) #18 RAPH1 (ENSBTAG00000027201) #19 CD28 (ENSBTAG00000007445) #20 ENSBTAG00000051061 CTLA4 (ENSBTAG00000013170) #21 ICOS (ENSBTAG00000021596) ENSBTAG00000040367 ENSBTAG00000051630 ENSBTAG00000049320 PARD3B (ENSBTAG00000010293) #22 ENSBTAG00000053833 #22 NRP2 (ENSBTAG00000011971) #23 INO80D (ENSBTAG00000014407) #24 ENSBTAG00000055132 NDUFS1 (ENSBTAG00000021976) #25 EEF1B2 (ENSBTAG00000021979) #26 CMKLR2 (ENSBTAG00000017043) #27 ZDBF2 (ENSBTAG00000031166) #29 ADAM23 (ENSBTAG00000019694) #31 ENSBTAG00000055316 FAM237A (ENSBTAG00000050134) DYTN (ENSBTAG00000046454) #32 MDH1B (ENSBTAG00000016192) #33 FASTKD2 (ENSBTAG00000016193) #34 CPO (ENSBTAG00000019190) #35 Atlantogenata ANCESTRAL SPECIES 9 ENSGT00860000133854 #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b Afrotheria ANCESTRAL SPECIES 1 ENSGT00860000133854.z.b #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00860000133854.z.b #7 ENSGT00940000154319.v #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a.h #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b.b Elephant DUPLICATION Elephant DUPLICATION Elephant DUPLICATION Elephant DUPLICATION Elephant MODERN SPECIES 301 CARF (ENSLAFG00000017289) #14 ENSLAFG00000020653 #15 ENSLAFG00000015098 #15 CYP20A1 (ENSLAFG00000015110) #16 ABI2 (ENSLAFG00000015117) #18 ENSLAFG00000015135 #19 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #20 CTLA4 (ENSLAFG00000006654) #21 ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 #22 ENSLAFG00000007708 #22 ENSLAFG00000026835 #22 ENSLAFG00000025673 #22 ENSLAFG00000030808 #22 NRP2 (ENSLAFG00000016414) #23 INO80D (ENSLAFG00000015352) #24 NDUFS1 (ENSLAFG00000013782) #25 EEF1B2 (ENSLAFG00000011812) #26 CMKLR2 (ENSLAFG00000009005) #27 ZDBF2 (ENSLAFG00000014253) #29 ADAM23 (ENSLAFG00000014452) #31 DYTN (ENSLAFG00000032161) #32 MDH1B (ENSLAFG00000015578) #33 FASTKD2 (ENSLAFG00000005198) #34 CPO (ENSLAFG00000009772) #35 KLF7 (ENSLAFG00000005822) #36 CREB1 (ENSLAFG00000013257) #37 METTL21A (ENSLAFG00000017103) ENSLAFG00000021558 Elephant MODERN SPECIES 301 WDR12 (ENSLAFG00000011955) #13 CARF (ENSLAFG00000017289) #14 ENSLAFG00000020653 #15 ENSLAFG00000015098 #15 CYP20A1 (ENSLAFG00000015110) #16 ABI2 (ENSLAFG00000015117) #18 ENSLAFG00000015135 #19 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #20 CTLA4 (ENSLAFG00000006654) #21 ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 #22 ENSLAFG00000007708 #22 ENSLAFG00000026835 #22 ENSLAFG00000025673 #22 ENSLAFG00000030808 #22 NRP2 (ENSLAFG00000016414) #23 INO80D (ENSLAFG00000015352) #24 NDUFS1 (ENSLAFG00000013782) #25 EEF1B2 (ENSLAFG00000011812) #26 CMKLR2 (ENSLAFG00000009005) #27 ZDBF2 (ENSLAFG00000014253) #29 ADAM23 (ENSLAFG00000014452) #31 DYTN (ENSLAFG00000032161) #32 MDH1B (ENSLAFG00000015578) #33 FASTKD2 (ENSLAFG00000005198) #34 CPO (ENSLAFG00000009772) #35 KLF7 (ENSLAFG00000005822) #36 CREB1 (ENSLAFG00000013257) #37 METTL21A (ENSLAFG00000017103) Elephant MODERN SPECIES 301 BMPR2 (ENSLAFG00000015201) #10 FAM117B (ENSLAFG00000006427) #11 ICA1L (ENSLAFG00000016989) #12 WDR12 (ENSLAFG00000011955) #13 CARF (ENSLAFG00000017289) #14 ENSLAFG00000020653 #15 ENSLAFG00000015098 #15 CYP20A1 (ENSLAFG00000015110) #16 ABI2 (ENSLAFG00000015117) #18 ENSLAFG00000015135 #19 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #20 CTLA4 (ENSLAFG00000006654) #21 ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 #22 ENSLAFG00000007708 #22 ENSLAFG00000026835 #22 ENSLAFG00000025673 #22 ENSLAFG00000030808 #22 NRP2 (ENSLAFG00000016414) #23 INO80D (ENSLAFG00000015352) #24 NDUFS1 (ENSLAFG00000013782) #25 EEF1B2 (ENSLAFG00000011812) #26 CMKLR2 (ENSLAFG00000009005) #27 ZDBF2 (ENSLAFG00000014253) #29 ADAM23 (ENSLAFG00000014452) #31 DYTN (ENSLAFG00000032161) #32 MDH1B (ENSLAFG00000015578) #33 FASTKD2 (ENSLAFG00000005198) #34 CPO (ENSLAFG00000009772) #35 Elephant MODERN SPECIES 301 FAM117B (ENSLAFG00000006427) #11 ICA1L (ENSLAFG00000016989) #12 WDR12 (ENSLAFG00000011955) #13 CARF (ENSLAFG00000017289) #14 ENSLAFG00000020653 #15 ENSLAFG00000015098 #15 CYP20A1 (ENSLAFG00000015110) #16 ABI2 (ENSLAFG00000015117) #18 ENSLAFG00000015135 #19 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #20 CTLA4 (ENSLAFG00000006654) #21 ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 #22 ENSLAFG00000007708 #22 ENSLAFG00000026835 #22 ENSLAFG00000025673 #22 ENSLAFG00000030808 #22 NRP2 (ENSLAFG00000016414) #23 INO80D (ENSLAFG00000015352) #24 NDUFS1 (ENSLAFG00000013782) #25 EEF1B2 (ENSLAFG00000011812) #26 CMKLR2 (ENSLAFG00000009005) #27 ZDBF2 (ENSLAFG00000014253) #29 ADAM23 (ENSLAFG00000014452) #31 DYTN (ENSLAFG00000032161) #32 MDH1B (ENSLAFG00000015578) #33 FASTKD2 (ENSLAFG00000005198) #34 CPO (ENSLAFG00000009772) #35 KLF7 (ENSLAFG00000005822) #36 Elephant MODERN SPECIES 301 ICA1L (ENSLAFG00000016989) #12 WDR12 (ENSLAFG00000011955) #13 CARF (ENSLAFG00000017289) #14 ENSLAFG00000020653 #15 ENSLAFG00000015098 #15 CYP20A1 (ENSLAFG00000015110) #16 ABI2 (ENSLAFG00000015117) #18 ENSLAFG00000015135 #19 ENSLAFG00000031357 CD28 (ENSLAFG00000017773) #20 CTLA4 (ENSLAFG00000006654) #21 ICOS (ENSLAFG00000006657) ENSLAFG00000026263 ENSLAFG00000030813 #22 ENSLAFG00000007708 #22 ENSLAFG00000026835 #22 ENSLAFG00000025673 #22 ENSLAFG00000030808 #22 NRP2 (ENSLAFG00000016414) #23 INO80D (ENSLAFG00000015352) #24 NDUFS1 (ENSLAFG00000013782) #25 EEF1B2 (ENSLAFG00000011812) #26 CMKLR2 (ENSLAFG00000009005) #27 ZDBF2 (ENSLAFG00000014253) #29 ADAM23 (ENSLAFG00000014452) #31 DYTN (ENSLAFG00000032161) #32 MDH1B (ENSLAFG00000015578) #33 FASTKD2 (ENSLAFG00000005198) #34 CPO (ENSLAFG00000009772) #35 KLF7 (ENSLAFG00000005822) #36 CREB1 (ENSLAFG00000013257) #37 Hyrax MODERN SPECIES 1363 PARD3B (ENSPCAG00000008109) #22 Tenrec MODERN SPECIES 1698 PARD3B (ENSETEG00000015170) #22 ENSETEG00000015174 Xenarthra ANCESTRAL SPECIES 686 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 Sloth MODERN SPECIES 1513 PARD3B (ENSCHOG00000009458) #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 1677 ENSDNOG00000036872 #22 NRP2 (ENSDNOG00000033847) #23 Armadillo MODERN SPECIES 1055 CYP20A1 (ENSDNOG00000009744) #16 ENSDNOG00000042764 ENSDNOG00000007878 #18 ENSDNOG00000042029 #19 CD28 (ENSDNOG00000047723) #20 CTLA4 (ENSDNOG00000006614) #21 ENSDNOG00000044126 ICOS (ENSDNOG00000049432) PARD3B (ENSDNOG00000010397) #22 Marsupialia ANCESTRAL SPECIES 8 ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000155877 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Marsupialia_b ANCESTRAL SPECIES 7 ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270.c #23 ENSGT00940000155877 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Diprotodontia ANCESTRAL SPECIES 31 ENSGT00940000154319 #8 ENSGT00940000153534.A.a #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270.c #23 ENSGT00940000155877 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Diprotodontia_a ANCESTRAL SPECIES 30 ENSGT00940000153534.A.a #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT01030000234979.a ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270.c #23 ENSGT00940000155877 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Common wonbat MODERN SPECIES 1038 FAM117B (ENSVURG00010005827) #11 ICA1L (ENSVURG00010005759) #12 WDR12 (ENSVURG00010005744) #13 CARF (ENSVURG00010005670) #14 NBEAL1 (ENSVURG00010005633) #15 ENSVURG00010005614 CYP20A1 (ENSVURG00010005594) #16 ABI2 (ENSVURG00010005572) #18 RAPH1 (ENSVURG00010005515) #19 ENSVURG00010005495 ENSVURG00010005489 CD28 (ENSVURG00010005486) #20 CTLA4 (ENSVURG00010005475) #21 ENSVURG00010005458 ENSVURG00010005443 PARD3B (ENSVURG00010005402) #22 NRP2 (ENSVURG00010005142) #23 ENSVURG00010005096 INO80D (ENSVURG00010005077) #24 NDUFS1 (ENSVURG00010005021) #25 ENSVURG00010004989 #26 CMKLR2 (ENSVURG00010004980) #27 ENSVURG00010004970 ENSVURG00010004965 #29 FAM237A (ENSVURG00010004897) MDH1B (ENSVURG00010004893) #33 FASTKD2 (ENSVURG00010004867) #34 CPO (ENSVURG00010004833) #35 ENSVURG00010004815 KLF7 (ENSVURG00010004801) #36 CREB1 (ENSVURG00010004759) #37 koala MODERN SPECIES 231 NOP58 (ENSPCIG00000008839) #9 BMPR2 (ENSPCIG00000008838) #10 FAM117B (ENSPCIG00000008837) #11 ICA1L (ENSPCIG00000008836) #12 WDR12 (ENSPCIG00000008835) #13 CARF (ENSPCIG00000008833) #14 NBEAL1 (ENSPCIG00000022908) #15 ENSPCIG00000022906 CYP20A1 (ENSPCIG00000022811) #16 ABI2 (ENSPCIG00000015338) #18 ENSPCIG00000015308 #19 ENSPCIG00000015292 CD28 (ENSPCIG00000015286) #20 CTLA4 (ENSPCIG00000015278) #21 ENSPCIG00000015275 PARD3B (ENSPCIG00000006317) #22 ENSPCIG00000006319 NRP2 (ENSPCIG00000006323) #23 ENSPCIG00000006327 INO80D (ENSPCIG00000006328) #24 NDUFS1 (ENSPCIG00000009914) #25 ENSPCIG00000009878 #26 CMKLR2 (ENSPCIG00000015684) #27 Wallaby MODERN SPECIES 2507 PARD3B (ENSMEUG00000012919) #22 Tasmanian devil MODERN SPECIES 2 NOP58 (ENSSHAG00000011398) #9 BMPR2 (ENSSHAG00000009795) #10 FAM117B (ENSSHAG00000008247) #11 ICA1L (ENSSHAG00000007656) #12 WDR12 (ENSSHAG00000006960) #13 CARF (ENSSHAG00000006210) #14 NBEAL1 (ENSSHAG00000000284) #15 ENSSHAG00000021267 CYP20A1 (ENSSHAG00000028734) #16 ABI2 (ENSSHAG00000008450) #18 ENSSHAG00000007679 #19 CD28 (ENSSHAG00000028743) #20 CTLA4 (ENSSHAG00000016177) #21 ENSSHAG00000015832 ENSSHAG00000024535 PARD3B (ENSSHAG00000001616) #22 ENSSHAG00000024159 #23 ENSSHAG00000018322 #23 ENSSHAG00000026001 INO80D (ENSSHAG00000029318) #24 NDUFS1 (ENSSHAG00000017865) #25 EEF1B2 (ENSSHAG00000017853) #26 CMKLR2 (ENSSHAG00000021936) #27 ENSSHAG00000028209 #29 ADAM23 (ENSSHAG00000017245) #31 FAM237A (ENSSHAG00000017064) MDH1B (ENSSHAG00000016820) #33 ENSSHAG00000016740 #34 ENSSHAG00000022521 CPO (ENSSHAG00000026232) #35 KLF7 (ENSSHAG00000015861) #36 Opossum MODERN SPECIES 6 FAM117B (ENSMODG00000016284) #11 ICA1L (ENSMODG00000016279) #12 WDR12 (ENSMODG00000016275) #13 CARF (ENSMODG00000016272) #14 ENSMODG00000047566 NBEAL1 (ENSMODG00000016268) #15 ENSMODG00000037522 CYP20A1 (ENSMODG00000016255) #16 ABI2 (ENSMODG00000016244) #18 ENSMODG00000016237 #19 CD28 (ENSMODG00000016234) #20 CTLA4 (ENSMODG00000016230) #21 ENSMODG00000025487 ENSMODG00000024816 ENSMODG00000024817 PARD3B (ENSMODG00000016213) #22 NRP2 (ENSMODG00000016052) #23 ENSMODG00000016028 INO80D (ENSMODG00000016027) #24 NDUFS1 (ENSMODG00000016019) #25 EEF1B2 (ENSMODG00000016012) #26 GPR1 (ENSMODG00000046264) #27 ADAM23 (ENSMODG00000016005) #31 FAM237A (ENSMODG00000027693) ENSMODG00000016001 #33 FASTKD2 (ENSMODG00000015997) #34 CPO (ENSMODG00000015987) #35 KLF7 (ENSMODG00000015982) #36 CREB1 (ENSMODG00000015970) #37 METTL21A (ENSMODG00000015959) ENSMODG00000015954 Platypus DUPLICATION Platypus MODERN SPECIES 18 FAM117B (ENSOANG00000036215) #11 ICA1L (ENSOANG00000011099) #12 WDR12 (ENSOANG00000011097) #13 CARF (ENSOANG00000011095) #14 NBEAL1 (ENSOANG00000011085) #15 ENSOANG00000009001 CYP20A1 (ENSOANG00000015019) #16 ABI2 (ENSOANG00000001380) #18 ENSOANG00000006769 #19 ENSOANG00000048576 CD28 (ENSOANG00000040633) #20 CTLA4 (ENSOANG00000010895) #21 ENSOANG00000007435 ENSOANG00000041151 PARD3B (ENSOANG00000014041) #22 ENSOANG00000044745 #22 NRP2 (ENSOANG00000012962) #23 ENSOANG00000038688 INO80D (ENSOANG00000012965) #24 NDUFS1 (ENSOANG00000002321) #25 EEF1B2 (ENSOANG00000012964) #26 CMKLR2 (ENSOANG00000012797) #27 ADAM23 (ENSOANG00000000660) #31 FAM237A (ENSOANG00000045785) MDH1B (ENSOANG00000000659) #33 ENSOANG00000020472 #34 KLF7 (ENSOANG00000047076) #36 TIMM17A (ENSOANG00000043200) LMOD1 (ENSOANG00000041996) SHISA4 (ENSOANG00000009360) IPO9 (ENSOANG00000009358) Platypus MODERN SPECIES 18 BMPR2 (ENSOANG00000012302) #10 FAM117B (ENSOANG00000036215) #11 ICA1L (ENSOANG00000011099) #12 WDR12 (ENSOANG00000011097) #13 CARF (ENSOANG00000011095) #14 NBEAL1 (ENSOANG00000011085) #15 ENSOANG00000009001 CYP20A1 (ENSOANG00000015019) #16 ABI2 (ENSOANG00000001380) #18 ENSOANG00000006769 #19 ENSOANG00000048576 CD28 (ENSOANG00000040633) #20 CTLA4 (ENSOANG00000010895) #21 ENSOANG00000007435 ENSOANG00000041151 PARD3B (ENSOANG00000014041) #22 ENSOANG00000044745 #22 NRP2 (ENSOANG00000012962) #23 ENSOANG00000038688 INO80D (ENSOANG00000012965) #24 NDUFS1 (ENSOANG00000002321) #25 EEF1B2 (ENSOANG00000012964) #26 CMKLR2 (ENSOANG00000012797) #27 ADAM23 (ENSOANG00000000660) #31 FAM237A (ENSOANG00000045785) MDH1B (ENSOANG00000000659) #33 ENSOANG00000020472 #34 KLF7 (ENSOANG00000047076) #36 TIMM17A (ENSOANG00000043200) LMOD1 (ENSOANG00000041996) SHISA4 (ENSOANG00000009360) Sauria ANCESTRAL SPECIES 32 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Lepidosauria ANCESTRAL SPECIES 7 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b tuatara MODERN SPECIES 1738 ENSSPUG00000018429 PARD3B (ENSSPUG00000018394) #22 NRP2 (ENSSPUG00000018362) #23 Episquamata ANCESTRAL SPECIES ENSGT00860000133854 #7 ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Laterata ANCESTRAL SPECIES 42 ENSGT00940000159606 ENSGT00940000158239.b ENSGT00950000183314 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Argentine black and white tegu MODERN SPECIES 12 ENSSMRG00000020791 KIAA2012 (ENSSMRG00000020790) #7 SUMO1 (ENSSMRG00000020789) #8 NOP58 (ENSSMRG00000020786) #9 BMPR2 (ENSSMRG00000020784) #10 FAM117B (ENSSMRG00000020783) #11 WDR12 (ENSSMRG00000020782) #13 ENSSMRG00000020781 NBEAL1 (ENSSMRG00000020780) #15 ENSSMRG00000020779 CYP20A1 (ENSSMRG00000020778) #16 ABI2 (ENSSMRG00000020777) #18 RAPH1 (ENSSMRG00000020776) #19 ENSSMRG00000020658 CTLA4 (ENSSMRG00000020651) #21 PARD3B (ENSSMRG00000020645) #22 NRP2 (ENSSMRG00000020640) #23 INO80D (ENSSMRG00000020639) #24 NDUFS1 (ENSSMRG00000020638) #25 EEF1B2 (ENSSMRG00000020633) #26 CMKLR2 (ENSSMRG00000020632) #27 ADAM23 (ENSSMRG00000020333) #31 FAM237A (ENSSMRG00000020332) MDH1B (ENSSMRG00000020330) #33 FASTKD2 (ENSSMRG00000020328) #34 KLF7 (ENSSMRG00000020327) #36 CREB1 (ENSSMRG00000020325) #37 METTL21A (ENSSMRG00000020324) ENSSMRG00000020322 ENSSMRG00000020321 PLEKHM3 (ENSSMRG00000020318) Common wall lizard MODERN SPECIES ENSPMRG00000006788 NOP58 (ENSPMRG00000006794) #9 BMPR2 (ENSPMRG00000006815) #10 ENSPMRG00000006832 ENSPMRG00000006842 ##12 WDR12 (ENSPMRG00000006856) #13 ENSPMRG00000006909 CARF (ENSPMRG00000006921) #14 ENSPMRG00000006930 NBEAL1 (ENSPMRG00000007358) #15 CYP20A1 (ENSPMRG00000008728) #16 ABI2 (ENSPMRG00000008747) #18 RAPH1 (ENSPMRG00000008789) #19 CD28 (ENSPMRG00000008873) #20 CTLA4 (ENSPMRG00000008883) #21 PARD3B (ENSPMRG00000008900) #22 ENSPMRG00000008928 ENSPMRG00000008932 NRP2 (ENSPMRG00000008950) #23 INO80D (ENSPMRG00000009029) #24 EEF1B2 (ENSPMRG00000009046) #26 NDUFS1 (ENSPMRG00000009096) #25 ADAM23 (ENSPMRG00000009258) #31 FAM237A (ENSPMRG00000009266) DYTN (ENSPMRG00000000114) #32 ENSPMRG00000000134 #33 ENSPMRG00000000143 #33 FASTKD2 (ENSPMRG00000000149) #34 KLF7 (ENSPMRG00000000188) #36 CREB1 (ENSPMRG00000000233) #37 METTL21A (ENSPMRG00000000269) Toxicofera ANCESTRAL SPECIES ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00930000150950.b #13 ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 Lizard MODERN SPECIES 822 BMPR2 (ENSACAG00000004885) #10 FAM117B (ENSACAG00000004859) #11 WDR12 (ENSACAG00000004774) #13 ENSACAG00000004755 ENSACAG00000043702 ENSACAG00000037627 NBEAL1 (ENSACAG00000004721) #15 ENSACAG00000004658 CYP20A1 (ENSACAG00000004604) #16 ENSACAG00000045333 ABI2 (ENSACAG00000004539) #18 RAPH1 (ENSACAG00000004500) #19 CD28 (ENSACAG00000004486) #20 ENSACAG00000028063 #21 ENSACAG00000037252 PARD3B (ENSACAG00000004428) #22 NRP2 (ENSACAG00000004128) #23 INO80D (ENSACAG00000004095) #24 NDUFS1 (ENSACAG00000001471) #25 CMKLR2 (ENSACAG00000001415) #27 EEF1B2 (ENSACAG00000001423) #26 ADAM23 (ENSACAG00000009477) #31 ENSACAG00000028631 #32 MDH1B (ENSACAG00000009563) #33 FASTKD2 (ENSACAG00000009610) #34 KLF7 (ENSACAG00000009642) #36 Elapidae ANCESTRAL SPECIES ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00930000150950.b #13 ENSGT00950000185065 ENSGT00390000003964.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089.g #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 Indian cobra MODERN SPECIES SUMO1 (ENSNNAG00000008916) #8 NOP58 (ENSNNAG00000008788) #9 BMPR2 (ENSNNAG00000008749) #10 FAM117B (ENSNNAG00000008713) #11 WDR12 (ENSNNAG00000008654) #13 ENSNNAG00000008600 NBEAL1 (ENSNNAG00000008400) #15 ENSNNAG00000008350 CYP20A1 (ENSNNAG00000008325) #16 ABI2 (ENSNNAG00000008284) #18 RAPH1 (ENSNNAG00000007996) #19 CD28 (ENSNNAG00000007953) #20 CTLA4 (ENSNNAG00000007939) #21 ICOS (ENSNNAG00000007918) ENSNNAG00000007910 PARD3B (ENSNNAG00000007817) #22 NRP2 (ENSNNAG00000007682) #23 INO80D (ENSNNAG00000007613) #24 NDUFS1 (ENSNNAG00000007093) #25 EEF1B2 (ENSNNAG00000006992) #26 CMKLR2 (ENSNNAG00000006981) #27 ADAM23 (ENSNNAG00000006219) #31 MDH1B (ENSNNAG00000006119) #33 FASTKD2 (ENSNNAG00000006083) #34 KLF7 (ENSNNAG00000006050) #36 CREB1 (ENSNNAG00000006029) #37 METTL21A (ENSNNAG00000005999) ENSNNAG00000005945 ENSNNAG00000005932 PLEKHM3 (ENSNNAG00000005905) ENSNNAG00000005842 Elapidae_a ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 Blue-lipped sea krait MODERN SPECIES 539 ENSLLTG00000002614 #22 Acanthophiinae ANCESTRAL SPECIES 39 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B ENSGT00940000159743 ENSGT00960000187202 Eastern brown snake MODERN SPECIES 36 ENSPTXG00000008221 ENSPTXG00000008219 PARD3B (ENSPTXG00000008179) #22 NRP2 (ENSPTXG00000008167) #23 INO80D (ENSPTXG00000008163) #24 NDUFS1 (ENSPTXG00000008161) #25 EEF1B2 (ENSPTXG00000008156) #26 CMKLR2 (ENSPTXG00000008154) #27 ADAM23 (ENSPTXG00000008147) #31 MDH1B (ENSPTXG00000008146) #33 FASTKD2 (ENSPTXG00000008144) #34 KLF7 (ENSPTXG00000008140) #36 CREB1 (ENSPTXG00000008139) #37 METTL21A (ENSPTXG00000008138) ENSPTXG00000008137 ENSPTXG00000008136 PLEKHM3 (ENSPTXG00000008135) IDH1 (ENSPTXG00000008132) Mainland tiger snake MODERN SPECIES 50 ENSNSUG00000005042 PARD3B (ENSNSUG00000005020) #22 NRP2 (ENSNSUG00000005004) #23 INO80D (ENSNSUG00000004988) #24 NDUFS1 (ENSNSUG00000004982) #25 EEF1B2 (ENSNSUG00000004974) #26 CMKLR2 (ENSNSUG00000004973) #27 ADAM23 (ENSNSUG00000004968) #31 MDH1B (ENSNSUG00000004966) #33 FASTKD2 (ENSNSUG00000004850) #34 KLF7 (ENSNSUG00000004849) #36 CREB1 (ENSNSUG00000004838) #37 METTL21A (ENSNSUG00000004836) ENSNSUG00000004835 ENSNSUG00000004833 ENSNSUG00000004832 PLEKHM3 (ENSNSUG00000004824) Archelosauria ANCESTRAL SPECIES 8 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00390000003964.b ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Archosauria ANCESTRAL SPECIES 6 ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Australian saltwater crocodile MODERN SPECIES 66 BMPR2 (ENSCPRG00005001396) #10 FAM117B (ENSCPRG00005001420) #11 ENSCPRG00005001426 WDR12 (ENSCPRG00005001450) #13 CARF (ENSCPRG00005001462) #14 ENSCPRG00005001474 NBEAL1 (ENSCPRG00005001495) #15 ENSCPRG00005001521 CYP20A1 (ENSCPRG00005001526) #16 ABI2 (ENSCPRG00005001556) #18 RAPH1 (ENSCPRG00005001588) #19 CD28 (ENSCPRG00005001690) #20 CTLA4 (ENSCPRG00005001699) #21 ICOS (ENSCPRG00005001703) ENSCPRG00005001708 PARD3B (ENSCPRG00005001781) #22 NRP2 (ENSCPRG00005001802) #23 INO80D (ENSCPRG00005001847) #24 NDUFS1 (ENSCPRG00005001849) #25 EEF1B2 (ENSCPRG00005001854) #26 CMKLR2 (ENSCPRG00005001863) #27 ADAM23 (ENSCPRG00005001887) #31 FAM237A (ENSCPRG00005001904) DYTN (ENSCPRG00005001912) #32 MDH1B (ENSCPRG00005001923) #33 FASTKD2 (ENSCPRG00005001926) #34 CPO (ENSCPRG00005001934) #35 KLF7 (ENSCPRG00005001954) #36 CREB1 (ENSCPRG00005001961) #37 METTL21A (ENSCPRG00005001979) ENSCPRG00005001990 Aves ANCESTRAL SPECIES 8 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000159232 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 African ostrich DUPLICATION African ostrich MODERN SPECIES 602 ENSSCUG00000009062 #22 NRP2 (ENSSCUG00000009065) #23 INO80D (ENSSCUG00000009069) #24 NDUFS1 (ENSSCUG00000009074) #25 EEF1B2 (ENSSCUG00000009076) #26 CMKLR2 (ENSSCUG00000009084) #27 ADAM23 (ENSSCUG00000009094) #31 FAM237A (ENSSCUG00000009115) DYTN (ENSSCUG00000009118) #32 MDH1B (ENSSCUG00000009125) #33 FASTKD2 (ENSSCUG00000009126) #34 CPO (ENSSCUG00000009130) #35 KLF7 (ENSSCUG00000009135) #36 CREB1 (ENSSCUG00000009137) #37 METTL21A (ENSSCUG00000009140) ENSSCUG00000009142 African ostrich MODERN SPECIES 1071 UNC80 (ENSSCUG00000013197) MAP2 (ENSSCUG00000013191) PTH2R (ENSSCUG00000013187) PIKFYVE (ENSSCUG00000013177) IDH1 (ENSSCUG00000013175) ENSSCUG00000013173 C2orf80 (ENSSCUG00000013171) ENSSCUG00000013166 ENSSCUG00000013162 NBEAL1 (ENSSCUG00000013063) #15 ABI2 (ENSSCUG00000013010) #18 RAPH1 (ENSSCUG00000013003) #19 CD28 (ENSSCUG00000012996) #20 CTLA4 (ENSSCUG00000012995) #21 ENSSCUG00000012993 PARD3B (ENSSCUG00000012989) #22 Neognathae ANCESTRAL SPECIES 6 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Galloanserae ANCESTRAL SPECIES 7 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408.b #37 ENSGT00940000157249 Anatidae ANCESTRAL SPECIES 10 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408.b #37 ENSGT00940000157249 ENSGT00940000154453.b.d ENSGT00940000161191.B Duck MODERN SPECIES 25 PIKFYVE (ENSAPLG00000014164) IDH1 (ENSAPLG00000014810) ENSAPLG00000015011 ENSAPLG00000018471 ENSAPLG00000024504 ENSAPLG00000017302 #15 ENSAPLG00000027901 #15 ENSAPLG00000025723 ENSAPLG00000025132 CYP20A1 (ENSAPLG00000015942) #16 ABI2 (ENSAPLG00000016216) #18 RAPH1 (ENSAPLG00000000860) #19 CD28 (ENSAPLG00000001723) #20 CTLA4 (ENSAPLG00000001966) #21 ICOS (ENSAPLG00000002410) PARD3B (ENSAPLG00000002583) #22 NRP2 (ENSAPLG00000002735) #23 INO80D (ENSAPLG00000004131) #24 NDUFS1 (ENSAPLG00000004262) #25 EEF1B2 (ENSAPLG00000004841) #26 CMKLR2 (ENSAPLG00000001630) #27 ADAM23 (ENSAPLG00000005205) #31 FAM237A (ENSAPLG00000005882) ENSAPLG00000005888 MDH1B (ENSAPLG00000006087) #33 FASTKD2 (ENSAPLG00000006177) #34 CPO (ENSAPLG00000006729) #35 KLF7 (ENSAPLG00000006752) #36 CREB1 (ENSAPLG00000006786) #37 METTL21A (ENSAPLG00000007133) ENSAPLG00000007167 Pink-footed goose MODERN SPECIES 120 ABI2 (ENSABRG00000018029) #18 RAPH1 (ENSABRG00000018013) #19 CD28 (ENSABRG00000018006) #20 CTLA4 (ENSABRG00000018000) #21 ICOS (ENSABRG00000017991) PARD3B (ENSABRG00000017834) #22 NRP2 (ENSABRG00000017280) #23 INO80D (ENSABRG00000017222) #24 NDUFS1 (ENSABRG00000017107) #25 EEF1B2 (ENSABRG00000017085) #26 CMKLR2 (ENSABRG00000017081) #27 ADAM23 (ENSABRG00000016867) #31 FAM237A (ENSABRG00000016843) MDH1B (ENSABRG00000016828) #33 FASTKD2 (ENSABRG00000016816) #34 CPO (ENSABRG00000016806) #35 KLF7 (ENSABRG00000016797) #36 CREB1 (ENSABRG00000016788) #37 ENSABRG00000016786 ENSABRG00000016702 ENSABRG00000016686 Phasianidae ANCESTRAL SPECIES 8 ENSGT00940000158532 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408.b #37 ENSGT00940000157249 Japanese quail MODERN SPECIES 25 ENSCJPG00005015348 ENSCJPG00005015349 METTL21A (ENSCJPG00005015350) CREB1 (ENSCJPG00005015351) #37 KLF7 (ENSCJPG00005015354) #36 CPO (ENSCJPG00005015355) #35 FASTKD2 (ENSCJPG00005015357) #34 MDH1B (ENSCJPG00005015360) #33 ADAM23 (ENSCJPG00005015363) #31 CMKLR2 (ENSCJPG00005015367) #27 RAPH1 (ENSCJPG00005015370) #19 ENSCJPG00005015375 CD28 (ENSCJPG00005015378) #20 CTLA4 (ENSCJPG00005015379) #21 ICOS (ENSCJPG00005015381) PARD3B (ENSCJPG00005015409) #22 ENSCJPG00005015846 ENSCJPG00005015847 ENSCJPG00005015848 NRP2 (ENSCJPG00005015851) #23 INO80D (ENSCJPG00005015857) #24 NDUFS1 (ENSCJPG00005015858) #25 EEF1B2 (ENSCJPG00005015859) #26 ABI2 (ENSCJPG00005015864) #18 CYP20A1 (ENSCJPG00005015897) #16 ENSCJPG00005015898 NBEAL1 (ENSCJPG00005015909) #15 ENSCJPG00005016282 IDH1 (ENSCJPG00005016283) PIKFYVE (ENSCJPG00005016284) DNAJC10 (ENSCJPG00005016431) Phasianidae_b ANCESTRAL SPECIES 8 ENSGT00940000158532 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408.b #37 ENSGT00940000157249 Chicken MODERN SPECIES 36 ITPRID2 (ENSGALG00010022406) PPP1R1C (ENSGALG00010022396) PDE1A (ENSGALG00010022334) DNAJC10 (ENSGALG00010022293) PIKFYVE (ENSGALG00010022245) IDH1 (ENSGALG00010022213) ENSGALG00010022181 NBEAL1 (ENSGALG00010022149) #15 ENSGALG00010022124 CYP20A1 (ENSGALG00010022116) #16 ABI2 (ENSGALG00010022079) #18 RAPH1 (ENSGALG00010022033) #19 CD28 (ENSGALG00010021995) #20 CTLA4 (ENSGALG00010021983) #21 ICOS (ENSGALG00010021971) PARD3B (ENSGALG00010021734) #22 NRP2 (ENSGALG00010026008) #23 INO80D (ENSGALG00010025994) #24 NDUFS1 (ENSGALG00010025984) #25 EEF1B2 (ENSGALG00010025974) #26 GPR1 (ENSGALG00010025960) #27 ENSGALG00010025836 #29 ADAM23 (ENSGALG00010026825) #31 FAM237A (ENSGALG00010025900) DYTN (ENSGALG00010025894) #32 MDH1B (ENSGALG00010025874) #33 FASTKD2 (ENSGALG00010025869) #34 CPO (ENSGALG00010025855) #35 KLF7 (ENSGALG00010025822) #36 CREB1 (ENSGALG00010025351) #37 METTL21A (ENSGALG00010025340) Turkey MODERN SPECIES 27 PPP1R1C (ENSMGAG00000009069) PDE1A (ENSMGAG00000009032) ENSMGAG00000008939 ENSMGAG00000008920 ENSMGAG00000008985 ENSMGAG00000019768 NBEAL1 (ENSMGAG00000008870) #15 ENSMGAG00000019797 CYP20A1 (ENSMGAG00000008831) #16 ABI2 (ENSMGAG00000008821) #18 RAPH1 (ENSMGAG00000008794) #19 CD28 (ENSMGAG00000008783) #20 CTLA4 (ENSMGAG00000008759) #21 ICOS (ENSMGAG00000008751) ENSMGAG00000021009 #23 PARD3B (ENSMGAG00000008728) #22 INO80D (ENSMGAG00000008621) #24 NDUFS1 (ENSMGAG00000008573) #25 EEF1B2 (ENSMGAG00000008548) #26 CMKLR2 (ENSMGAG00000016159) #27 ADAM23 (ENSMGAG00000008433) #31 FAM237A (ENSMGAG00000020531) MDH1B (ENSMGAG00000008532) #33 FASTKD2 (ENSMGAG00000008516) #34 CPO (ENSMGAG00000008430) #35 KLF7 (ENSMGAG00000008396) #36 CREB1 (ENSMGAG00000008360) #37 METTL21A (ENSMGAG00000008350) ENSMGAG00000008327 ENSMGAG00000016153 PLEKHM3 (ENSMGAG00000008315) Neognathae_b ANCESTRAL SPECIES 7 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Passeriformes ANCESTRAL SPECIES 6 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Passeriformes_d ANCESTRAL SPECIES 8 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Passeriformes_g ANCESTRAL SPECIES 9 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Medium ground finch MODERN SPECIES 1 PPP1R1C (ENSGFOG00000004599) PDE1A (ENSGFOG00000004634) DNAJC10 (ENSGFOG00000004722) PIKFYVE (ENSGFOG00000004768) IDH1 (ENSGFOG00000004936) ENSGFOG00000004948 NBEAL1 (ENSGFOG00000005037) #15 ENSGFOG00000006136 CYP20A1 (ENSGFOG00000006144) #16 ABI2 (ENSGFOG00000006158) #18 RAPH1 (ENSGFOG00000006191) #19 CD28 (ENSGFOG00000006204) #20 CTLA4 (ENSGFOG00000006210) #21 ICOS (ENSGFOG00000006216) ENSGFOG00000006219 PARD3B (ENSGFOG00000006247) #22 NRP2 (ENSGFOG00000006567) #23 INO80D (ENSGFOG00000006596) #24 NDUFS1 (ENSGFOG00000006610) #25 EEF1B2 (ENSGFOG00000006636) #26 ENSGFOG00000006645 CMKLR2 (ENSGFOG00000006655) #27 ADAM23 (ENSGFOG00000006668) #31 FAM237A (ENSGFOG00000006747) DYTN (ENSGFOG00000006753) #32 MDH1B (ENSGFOG00000006762) #33 FASTKD2 (ENSGFOG00000006769) #34 CPO (ENSGFOG00000006781) #35 KLF7 (ENSGFOG00000006789) #36 CREB1 (ENSGFOG00000006794) #37 METTL21A (ENSGFOG00000006799) Passeroidea ANCESTRAL SPECIES 8 ENSGT00940000160192 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00940000177631 ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00940000155041.n #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b Zebra finch MODERN SPECIES 29 PDE1A (ENSTGUG00000009501) DNAJC10 (ENSTGUG00000009565) PIKFYVE (ENSTGUG00000009607) ENSTGUG00000028065 IDH1 (ENSTGUG00000023800) ENSTGUG00000018851 NBEAL1 (ENSTGUG00000029141) #15 ENSTGUG00000025723 CYP20A1 (ENSTGUG00000009709) #16 ABI2 (ENSTGUG00000009728) #18 RAPH1 (ENSTGUG00000009747) #19 CD28 (ENSTGUG00000016732) #20 CTLA4 (ENSTGUG00000009756) #21 ICOS (ENSTGUG00000009766) ENSTGUG00000025370 PARD3B (ENSTGUG00000009770) #22 NRP2 (ENSTGUG00000009797) #23 INO80D (ENSTGUG00000009890) #24 NDUFS1 (ENSTGUG00000009895) #25 EEF1B2 (ENSTGUG00000009931) #26 CMKLR2 (ENSTGUG00000009954) #27 ADAM23 (ENSTGUG00000009963) #31 DYTN (ENSTGUG00000027316) #32 FAM237A (ENSTGUG00000009992) MDH1B (ENSTGUG00000009999) #33 FASTKD2 (ENSTGUG00000010004) #34 CPO (ENSTGUG00000010012) #35 KLF7 (ENSTGUG00000010017) #36 CREB1 (ENSTGUG00000021110) #37 METTL21A (ENSTGUG00000010049) ENSTGUG00000010055 Common canary MODERN SPECIES 8 ITPRID2 (ENSSCAG00000001386) PPP1R1C (ENSSCAG00000001436) PDE1A (ENSSCAG00000001471) DNAJC10 (ENSSCAG00000001534) PIKFYVE (ENSSCAG00000001572) IDH1 (ENSSCAG00000001636) ENSSCAG00000001645 NBEAL1 (ENSSCAG00000001665) #15 ENSSCAG00000001706 CYP20A1 (ENSSCAG00000001710) #16 ABI2 (ENSSCAG00000001723) #18 RAPH1 (ENSSCAG00000001749) #19 CD28 (ENSSCAG00000001788) #20 CTLA4 (ENSSCAG00000001805) #21 ICOS (ENSSCAG00000001811) PARD3B (ENSSCAG00000001874) #22 NRP2 (ENSSCAG00000002055) #23 INO80D (ENSSCAG00000002336) #24 NDUFS1 (ENSSCAG00000002344) #25 EEF1B2 (ENSSCAG00000002352) #26 ENSSCAG00000002359 CMKLR2 (ENSSCAG00000002370) #27 ADAM23 (ENSSCAG00000002375) #31 FAM237A (ENSSCAG00000002412) MDH1B (ENSSCAG00000002419) #33 FASTKD2 (ENSSCAG00000002424) #34 CPO (ENSSCAG00000002428) #35 KLF7 (ENSSCAG00000002434) #36 CREB1 (ENSSCAG00000002440) #37 METTL21A (ENSSCAG00000002451) ENSSCAG00000002462 Flycatcher MODERN SPECIES 26 ENSFALG00000003612 ENSFALG00000027401 ENSFALG00000003616 ENSFALG00000003629 ENSFALG00000003640 ENSFALG00000023124 ENSFALG00000023047 #15 ENSFALG00000003658 #15 ENSFALG00000003669 CYP20A1 (ENSFALG00000003678) #16 ABI2 (ENSFALG00000003705) #18 RAPH1 (ENSFALG00000003713) #19 CD28 (ENSFALG00000003718) #20 CTLA4 (ENSFALG00000003729) #21 ICOS (ENSFALG00000003743) PARD3B (ENSFALG00000003749) #22 ENSFALG00000024358 NRP2 (ENSFALG00000003789) #23 INO80D (ENSFALG00000003838) #24 NDUFS1 (ENSFALG00000003849) #25 EEF1B2 (ENSFALG00000003879) #26 CMKLR2 (ENSFALG00000015287) #27 ADAM23 (ENSFALG00000003913) #31 FAM237A (ENSFALG00000003948) DYTN (ENSFALG00000003952) #32 MDH1B (ENSFALG00000003957) #33 FASTKD2 (ENSFALG00000003964) #34 CPO (ENSFALG00000003980) #35 KLF7 (ENSFALG00000003989) #36 ENSFALG00000023985 CREB1 (ENSFALG00000003996) #37 Great tit MODERN SPECIES 27 ITPRID2 (ENSPMJG00000018354) PPP1R1C (ENSPMJG00000018351) PDE1A (ENSPMJG00000018348) DNAJC10 (ENSPMJG00000018346) PIKFYVE (ENSPMJG00000018335) IDH1 (ENSPMJG00000018333) ENSPMJG00000018332 NBEAL1 (ENSPMJG00000018330) #15 ENSPMJG00000018329 CYP20A1 (ENSPMJG00000018328) #16 ABI2 (ENSPMJG00000018327) #18 RAPH1 (ENSPMJG00000018308) #19 CD28 (ENSPMJG00000018298) #20 CTLA4 (ENSPMJG00000018297) #21 ICOS (ENSPMJG00000018295) PARD3B (ENSPMJG00000018290) #22 NRP2 (ENSPMJG00000018287) #23 INO80D (ENSPMJG00000018285) #24 NDUFS1 (ENSPMJG00000018281) #25 EEF1B2 (ENSPMJG00000018274) #26 CMKLR2 (ENSPMJG00000018273) #27 ADAM23 (ENSPMJG00000018267) #31 FAM237A (ENSPMJG00000018264) DYTN (ENSPMJG00000018263) #32 MDH1B (ENSPMJG00000018262) #33 FASTKD2 (ENSPMJG00000018261) #34 CPO (ENSPMJG00000018259) #35 KLF7 (ENSPMJG00000018257) #36 CREB1 (ENSPMJG00000018256) #37 METTL21A (ENSPMJG00000018255) ENSPMJG00000018252 Neognathae_c ANCESTRAL SPECIES 9 ENSGT00940000157043 ENSGT00940000155558 ENSGT00940000156307.b ENSGT00390000012547.b ENSGT00940000154107.b.j.b ENSGT00390000004840 ENSGT00940000163494.a.b.g.b ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Golden eagle MODERN SPECIES 22 DNAJC10 (ENSACCG00020002475) PIKFYVE (ENSACCG00020002433) IDH1 (ENSACCG00020002412) ENSACCG00020002399 ENSACCG00020002387 ENSACCG00020002374 ENSACCG00020002359 NBEAL1 (ENSACCG00020001867) #15 ENSACCG00020001270 CYP20A1 (ENSACCG00020001252) #16 ABI2 (ENSACCG00020001210) #18 RAPH1 (ENSACCG00020001057) #19 CD28 (ENSACCG00020000853) #20 CTLA4 (ENSACCG00020000823) #21 ICOS (ENSACCG00020000759) PARD3B (ENSACCG00020000685) #22 NRP2 (ENSACCG00020000561) #23 INO80D (ENSACCG00020000521) #24 NDUFS1 (ENSACCG00020000486) #25 EEF1B2 (ENSACCG00020000452) #26 CMKLR2 (ENSACCG00020000445) #27 ADAM23 (ENSACCG00020000416) #31 FAM237A (ENSACCG00020000352) DYTN (ENSACCG00020000333) #32 MDH1B (ENSACCG00020000316) #33 FASTKD2 (ENSACCG00020003396) #34 CPO (ENSACCG00020003371) #35 KLF7 (ENSACCG00020003351) #36 CREB1 (ENSACCG00020003332) #37 METTL21A (ENSACCG00020003321) ENSACCG00020003303 Kakapo DUPLICATION Kakapo MODERN SPECIES 22 ENSSHBG00005005130 ENSSHBG00005005122 ENSSHBG00005005117 IDH1 (ENSSHBG00005005110) ENSSHBG00005005104 C2orf80 (ENSSHBG00005005096) ENSSHBG00005005091 NBEAL1 (ENSSHBG00005003608) #15 ENSSHBG00005002906 CYP20A1 (ENSSHBG00005002889) #16 ABI2 (ENSSHBG00005002858) #18 RAPH1 (ENSSHBG00005002809) #19 CTLA4 (ENSSHBG00005002762) #21 ICOS (ENSSHBG00005002727) PARD3B (ENSSHBG00005002706) #22 ENSSHBG00005002675 #22 NRP2 (ENSSHBG00005002621) #23 INO80D (ENSSHBG00005002582) #24 NDUFS1 (ENSSHBG00005002546) #25 EEF1B2 (ENSSHBG00005002514) #26 CMKLR2 (ENSSHBG00005002504) #27 ENSSHBG00005002492 #29 ADAM23 (ENSSHBG00005002434) #31 FAM237A (ENSSHBG00005002374) MDH1B (ENSSHBG00005002354) #33 FASTKD2 (ENSSHBG00005002335) #34 CPO (ENSSHBG00005002311) #35 KLF7 (ENSSHBG00005002296) #36 CREB1 (ENSSHBG00005002287) #37 METTL21A (ENSSHBG00005002278) ENSSHBG00005002269 Kakapo MODERN SPECIES 22 PDE1A (ENSSHBG00005005190) ENSSHBG00005005130 ENSSHBG00005005122 ENSSHBG00005005117 IDH1 (ENSSHBG00005005110) ENSSHBG00005005104 C2orf80 (ENSSHBG00005005096) ENSSHBG00005005091 NBEAL1 (ENSSHBG00005003608) #15 ENSSHBG00005002906 CYP20A1 (ENSSHBG00005002889) #16 ABI2 (ENSSHBG00005002858) #18 RAPH1 (ENSSHBG00005002809) #19 CTLA4 (ENSSHBG00005002762) #21 ICOS (ENSSHBG00005002727) PARD3B (ENSSHBG00005002706) #22 ENSSHBG00005002675 #22 NRP2 (ENSSHBG00005002621) #23 INO80D (ENSSHBG00005002582) #24 NDUFS1 (ENSSHBG00005002546) #25 EEF1B2 (ENSSHBG00005002514) #26 CMKLR2 (ENSSHBG00005002504) #27 ENSSHBG00005002492 #29 ADAM23 (ENSSHBG00005002434) #31 FAM237A (ENSSHBG00005002374) MDH1B (ENSSHBG00005002354) #33 FASTKD2 (ENSSHBG00005002335) #34 CPO (ENSSHBG00005002311) #35 KLF7 (ENSSHBG00005002296) #36 CREB1 (ENSSHBG00005002287) #37 METTL21A (ENSSHBG00005002278) Cryptodira ANCESTRAL SPECIES 5 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Chinese turtle MODERN SPECIES 677 KCTD18 (ENSPSIG00000018125) ENSPSIG00000018140 ENSPSIG00000018142 ENSPSIG00000003550 ENSPSIG00000003565 ENSPSIG00000003574 BZW1 (ENSPSIG00000003613) CLK1 (ENSPSIG00000003762) PPIL3 (ENSPSIG00000003967) NIF3L1 (ENSPSIG00000004085) ORC2 (ENSPSIG00000004159) HYCC2 (ENSPSIG00000004753) NDUFB3 (ENSPSIG00000004805) CFLAR (ENSPSIG00000004865) ENSPSIG00000001200 PARD3B (ENSPSIG00000004999) #22 NRP2 (ENSPSIG00000005456) #23 Testudinoidea ANCESTRAL SPECIES 11 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Emydidae ANCESTRAL SPECIES 4 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 Three-toed box turtle MODERN SPECIES 25 SUMO1 (ENSTMTG00000010925) #8 NOP58 (ENSTMTG00000010944) #9 BMPR2 (ENSTMTG00000011025) #10 FAM117B (ENSTMTG00000011056) #11 ICA1L (ENSTMTG00000011077) #12 WDR12 (ENSTMTG00000011113) #13 CARF (ENSTMTG00000011136) #14 ENSTMTG00000011258 NBEAL1 (ENSTMTG00000011535) #15 ENSTMTG00000000064 ABI2 (ENSTMTG00000000124) #18 RAPH1 (ENSTMTG00000000330) #19 CD28 (ENSTMTG00000000707) #20 CTLA4 (ENSTMTG00000000717) #21 ICOS (ENSTMTG00000000728) PARD3B (ENSTMTG00000000749) #22 NRP2 (ENSTMTG00000000762) #23 INO80D (ENSTMTG00000000797) #24 NDUFS1 (ENSTMTG00000000828) #25 EEF1B2 (ENSTMTG00000000857) #26 CMKLR2 (ENSTMTG00000000886) #27 ADAM23 (ENSTMTG00000000910) #31 FAM237A (ENSTMTG00000000963) DYTN (ENSTMTG00000000982) #32 MDH1B (ENSTMTG00000001002) #33 FASTKD2 (ENSTMTG00000001072) #34 CPO (ENSTMTG00000001098) #35 KLF7 (ENSTMTG00000001122) #36 CREB1 (ENSTMTG00000001136) #37 METTL21A (ENSTMTG00000001153) ENSTMTG00000001162 painted turtle DUPLICATION painted turtle MODERN SPECIES 805 ENSCPBG00000015084 STK32A (ENSCPBG00000018970) ENSCPBG00000019076 ENSCPBG00000019086 #22 NRP2 (ENSCPBG00000019110) #23 INO80D (ENSCPBG00000019181) #24 NDUFS1 (ENSCPBG00000019234) #25 EEF1B2 (ENSCPBG00000019285) #26 ENSCPBG00000019321 CMKLR2 (ENSCPBG00000019397) #27 ADAM23 (ENSCPBG00000019586) #31 FAM237A (ENSCPBG00000020040) DYTN (ENSCPBG00000020053) #32 MDH1B (ENSCPBG00000020070) #33 FASTKD2 (ENSCPBG00000020108) #34 CPO (ENSCPBG00000020174) #35 KLF7 (ENSCPBG00000020188) #36 CREB1 (ENSCPBG00000020191) #37 METTL21A (ENSCPBG00000020196) painted turtle MODERN SPECIES 2 BMPR2 (ENSCPBG00000011298) #10 ENSCPBG00000011285 #11 ENSCPBG00000011283 #11 ICA1L (ENSCPBG00000011260) #12 WDR12 (ENSCPBG00000011256) #13 CARF (ENSCPBG00000011242) #14 ENSCPBG00000011238 NBEAL1 (ENSCPBG00000008970) #15 ENSCPBG00000008883 CYP20A1 (ENSCPBG00000008879) #16 ABI2 (ENSCPBG00000008865) #18 RAPH1 (ENSCPBG00000008797) #19 CD28 (ENSCPBG00000008786) #20 CTLA4 (ENSCPBG00000008783) #21 ICOS (ENSCPBG00000008777) PARD3B (ENSCPBG00000008767) #22 Testudinidae ANCESTRAL SPECIES 8 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00950000185065 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000176171 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00960000187394 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00970000193449 ENSGT00940000160642 #27 ENSGT00440000037606.b #29 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508 #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 Goode s thornscrub tortoise MODERN SPECIES 2 BMPR2 (ENSGEVG00005011391) #10 FAM117B (ENSGEVG00005011292) #11 ICA1L (ENSGEVG00005011235) #12 WDR12 (ENSGEVG00005011195) #13 CARF (ENSGEVG00005011158) #14 ENSGEVG00005011079 NBEAL1 (ENSGEVG00005007841) #15 ENSGEVG00005007312 CYP20A1 (ENSGEVG00005007271) #16 ENSGEVG00005007253 ABI2 (ENSGEVG00005007221) #18 RAPH1 (ENSGEVG00005007171) #19 CD28 (ENSGEVG00005007000) #20 CTLA4 (ENSGEVG00005006968) #21 ICOS (ENSGEVG00005006946) PARD3B (ENSGEVG00005006583) #22 ENSGEVG00005006463 NRP2 (ENSGEVG00005006393) #23 INO80D (ENSGEVG00005006347) #24 NDUFS1 (ENSGEVG00005006314) #25 EEF1B2 (ENSGEVG00005006284) #26 CMKLR2 (ENSGEVG00005006269) #27 ENSGEVG00005006255 #29 ADAM23 (ENSGEVG00005006163) #31 FAM237A (ENSGEVG00005006142) DYTN (ENSGEVG00005006111) #32 MDH1B (ENSGEVG00005006096) #33 FASTKD2 (ENSGEVG00005006068) #34 CPO (ENSGEVG00005005978) #35 KLF7 (ENSGEVG00005005958) #36 CREB1 (ENSGEVG00005005883) #37 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 668 ENSCABG00000003073 #22 NRP2 (ENSCABG00000003082) #23 INO80D (ENSCABG00000003095) #24 NDUFS1 (ENSCABG00000003121) #25 EEF1B2 (ENSCABG00000003323) #26 ENSCABG00000003325 CMKLR2 (ENSCABG00000003336) #27 Abingdon island giant tortoise MODERN SPECIES 2640 PARD3B (ENSCABG00000016879) #22 MCOLN1 (ENSCABG00000016875) PNPLA6 (ENSCABG00000012894) ENSCABG00000012695 ENSCABG00000012650 Anura ANCESTRAL SPECIES 39 ENSGT00940000154319 #8 ENSGT00940000153534.A #9 ENSGT00940000156449 #10 ENSGT00950000183046.a.a #11 ENSGT00390000005530.a.a #12 ENSGT00930000150950.b #13 ENSGT00390000013916 #14 ENSGT00940000155041 #15 ENSGT00390000017619 ENSGT00500000044939 #16 ENSGT00940000156089 #18 ENSGT00940000156552 #19 ENSGT00530000063873.A #20 ENSGT00530000063873.B #21 ENSGT00390000000801 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642.b #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000161508.d #35 ENSGT00940000155235 #36 ENSGT00940000155408 #37 ENSGT00940000157249 ENSGT00940000154453.b ENSGT00940000161191.B Frog MODERN SPECIES 9 dnah7 (ENSXETG00000022093) nbeal1 (ENSXETG00000022086) #15 carf (ENSXETG00000031604) #14 wdr12 (ENSXETG00000022077) #13 fam117b (ENSXETG00000022076) #11 bmpr2 (ENSXETG00000022074) #10 nop58 (ENSXETG00000022073) #9 sumo1 (ENSXETG00000022072) #8 kiaa2012 (ENSXETG00000041127) #7 fzd7 (ENSXETG00000012404) ENSXETG00000040147 ENSXETG00000037714 cdk15 (ENSXETG00000012405) als2 (ENSXETG00000012406) ICOS (ENSXETG00000040525) pard3b (ENSXETG00000012407) #22 nrp2 (ENSXETG00000010095) #23 ENSXETG00000048152 ino80d (ENSXETG00000033629) #24 eef1b2 (ENSXETG00000010098) #26 ndufs1 (ENSXETG00000010108) #25 cops8 (ENSXETG00000025427) cmklr2 (ENSXETG00000043302) #27 ENSXETG00000042410 ENSXETG00000046685 adam23 (ENSXETG00000010118) #31 ENSXETG00000044734 mdh1b (ENSXETG00000034073) #33 fastkd2 (ENSXETG00000031283) #34 ENSXETG00000048816 #35 klf7 (ENSXETG00000046427) #36 Leishan spiny toad MODERN SPECIES 10 CARF (ENSLLEG00000013266) #14 NBEAL1 (ENSLLEG00000011871) #15 ENSLLEG00000011716 CYP20A1 (ENSLLEG00000011493) #16 ENSLLEG00000011462 ABI2 (ENSLLEG00000010961) #18 RAPH1 (ENSLLEG00000010703) #19 ENSLLEG00000010668 CD28 (ENSLLEG00000010533) #20 CTLA4 (ENSLLEG00000010451) #21 ENSLLEG00000010351 ENSLLEG00000010325 ENSLLEG00000010283 ENSLLEG00000010251 ENSLLEG00000010225 PARD3B (ENSLLEG00000009175) #22 ENSLLEG00000009072 NRP2 (ENSLLEG00000008733) #23 DUSP19 (ENSLLEG00000008672) NCKAP1 (ENSLLEG00000007431) FRZB (ENSLLEG00000007263) ENSLLEG00000006981 PDE1A (ENSLLEG00000006725) PPP1R1C (ENSLLEG00000006668) ITPRID2 (ENSLLEG00000006600) NEUROD1 (ENSLLEG00000006576) CERKL (ENSLLEG00000006429) ITGA4 (ENSLLEG00000006184) ENSLLEG00000006132 UBE2E3 (ENSLLEG00000006049) ENSLLEG00000006014 Coelacanth MODERN SPECIES 669 PARD3B (ENSLACG00000003766) #22 ENSLACG00000013079 ##22 NRP2 (ENSLACG00000013759) #23 INO80D (ENSLACG00000015319) #24 NDUFS1 (ENSLACG00000015589) #25 EEF1B2 (ENSLACG00000015714) #26 CMKLR2 (ENSLACG00000015809) #27 Actinopterygii ANCESTRAL SPECIES 116 ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126 ENSGT00940000166348 ENSGT00940000161508 #35 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00940000157974 #24 ENSGT00940000153514.b #25 ENSGT00950000183014.f.a #26 ENSGT00940000160642 #27 ENSGT00940000158781 #31 ENSGT00390000015769.B ENSGT00940000162403 #32 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.B #21 ENSGT00530000063873.A #20 ENSGT00940000156552 #19 ENSGT00940000156089 #18 ENSGT00940000176171 Reedfish MODERN SPECIES 16 pms1 (ENSECRG00000006053) mstnb (ENSECRG00000006069) ENSECRG00000006074 hibch (ENSECRG00000006082) INPP1 (ENSECRG00000006100) mfsd6a (ENSECRG00000006109) nemp2 (ENSECRG00000006123) nab1a (ENSECRG00000006135) glsa (ENSECRG00000006167) ENSECRG00000006225 STAT4 (ENSECRG00000006257) atic (ENSECRG00000006296) fn1a (ENSECRG00000006329) ENSECRG00000006363 cpo (ENSECRG00000006382) #35 PARD3B (ENSECRG00000006452) #22 ENSECRG00000006477 #23 nrp2a (ENSECRG00000006488) #23 ino80db (ENSECRG00000006513) #24 ndufs1 (ENSECRG00000006523) #25 eef1b2 (ENSECRG00000006546) #26 CMKLR2 (ENSECRG00000006553) #27 ADAM23 (ENSECRG00000006567) #31 FAM237A (ENSECRG00000006588) mdh1b (ENSECRG00000006596) #33 FASTKD2 (ENSECRG00000006608) #34 CTLA4 (ENSECRG00000006618) #21 raph1b (ENSECRG00000006637) #19 abi2b (ENSECRG00000006679) #18 cyp20a1 (ENSECRG00000006712) #16 ENSECRG00000006727 Neopterygii ANCESTRAL SPECIES 193 ENSGT00390000016151 ENSGT00940000154486.b.a.a.b ENSGT00940000154486.b.b ENSGT00940000155311.B ENSGT00530000063599.B ENSGT00390000002174.b ENSGT00390000006330.a.a ENSGT00390000010463.a.b ENSGT01050000244905.F ENSGT01050000244905.D ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126 ENSGT00940000166348 ENSGT00940000161508 #35 ENSGT00950000183214.a.b.a.b #22 ENSGT00940000155270 #23 ENSGT00950000183019.f.b.b ENSGT00940000157916 ENSGT00390000000862 ENSGT00940000156160 Spotted gar MODERN SPECIES 650 TMPRSS6 (ENSLOCG00000011175) il2rb (ENSLOCG00000011165) ENSLOCG00000011158 ENSLOCG00000011151 ENSLOCG00000011143 TST (ENSLOCG00000011138) ENSLOCG00000011136 ENSLOCG00000011127 ENSLOCG00000011119 mief1 (ENSLOCG00000011112) atf4a (ENSLOCG00000011103) ENSLOCG00000017844 ENSLOCG00000011098 ENSLOCG00000011089 cpo (ENSLOCG00000011079) #35 ENSLOCG00000011058 #22 nrp2a (ENSLOCG00000011036) #23 prkag3b (ENSLOCG00000011025) ENSLOCG00000011018 cnppd1 (ENSLOCG00000011010) ENSLOCG00000011002 retreg2 (ENSLOCG00000010995) FER1L6 (ENSLOCG00000010977) ENSLOCG00000010972 CFAP65 (ENSLOCG00000010951) mnx2b (ENSLOCG00000010942) stk16 (ENSLOCG00000010936) MAP3K2 (ENSLOCG00000010929) ercc3 (ENSLOCG00000010907) ENSLOCG00000010896 ENSLOCG00000010886 Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Clupeocephala ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Pinecone sodierfish MODERN SPECIES 13 tuba8l5 (ENSMMDG00005023844) tuba8l2 (ENSMMDG00005023841) ENSMMDG00005023838 ENSMMDG00005023837 ENSMMDG00005023835 ##34 WNT6 (ENSMMDG00005023833) wnt10a (ENSMMDG00005023832) ENSMMDG00005023829 ENSMMDG00005023828 fev (ENSMMDG00005023827) cryba2b (ENSMMDG00005023825) umps (ENSMMDG00005023818) fn1a (ENSMMDG00005016586) ENSMMDG00005016265 ENSMMDG00005016261 #35 ENSMMDG00005016257 #22 ENSMMDG00005016255 #22 nrp2b (ENSMMDG00005016249) #23 epb41l5 (ENSMMDG00005016153) ptpn4a (ENSMMDG00005015701) tmem177 (ENSMMDG00005015667) MRAS (ENSMMDG00005015654) pth2ra (ENSMMDG00005015640) ENSMMDG00005015629 ENSMMDG00005015621 tmem163a (ENSMMDG00005015619) acmsd (ENSMMDG00005015615) ccnt2a (ENSMMDG00005015604) ENSMMDG00005015599 ramp1 (ENSMMDG00005015595) ube2f (ENSMMDG00005015591) Percomorphaceae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Ovalentaria ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Cichlidae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Haplochromini ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.e #22 P. nyererei MODERN SPECIES 430 ENSPNYG00000006504 ENSPNYG00000006498 LRP1B (ENSPNYG00000006319) BZW1 (ENSPNYG00000006245) MYO1B (ENSPNYG00000006160) mnx2a (ENSPNYG00000006079) ENSPNYG00000006042 ENSPNYG00000006000 ##34 WNT6 (ENSPNYG00000005978) wnt10a (ENSPNYG00000005950) cdk5r2b (ENSPNYG00000005938) fev (ENSPNYG00000005923) cryba2b (ENSPNYG00000005892) umps (ENSPNYG00000005838) fn1a (ENSPNYG00000005692) ENSPNYG00000005662 #22 ENSPNYG00000005648 #22 nrp2b (ENSPNYG00000005599) #23 epb41l5 (ENSPNYG00000005555) ptpn4a (ENSPNYG00000005464) tmem177 (ENSPNYG00000005436) MRAS (ENSPNYG00000005416) Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 178 ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00950000183214.a.b.a.b.f.b #22 ENSGT00940000155270 #23 ENSGT00940000156160 ENSGT00390000000862 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00530000063873.B #21 ENSGT00940000178309 ENSGT00940000156552.c.a #19 ENSGT00940000156089 #18 ENSGT00500000044939 #16 ENSGT00390000005159 ENSGT00940000156444 ENSGT00940000155861.C.e ENSGT00940000159606 Clupeocephala ANCESTRAL SPECIES 3 ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000178309 ENSGT00940000174369 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00940000156089.e.b #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a Otomorpha ANCESTRAL SPECIES 24 ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000168433 ENSGT00940000161508.a #35 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #14 Clupeiformes ANCESTRAL SPECIES 164 ENSGT00390000017619 ENSGT00940000164444.a ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000174369 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00390000013916 #14 ENSGT00950000183046.a.a.fb #11 ENSGT00940000156449.a #10 Denticle herring MODERN SPECIES 19 ENSDCDG00000004074 mettl8 (ENSDCDG00000004079) ENSDCDG00000004089 cybrd1 (ENSDCDG00000004092) ENSDCDG00000004100 BIN1 (ENSDCDG00000004121) TMEM198 (ENSDCDG00000004173) desma (ENSDCDG00000004177) ptprna (ENSDCDG00000004193) tuba8l3 (ENSDCDG00000004227) ENSDCDG00000004230 ENSDCDG00000004231 ENSDCDG00000004234 fn1a (ENSDCDG00000004283) CPO (ENSDCDG00000004945) #35 ENSDCDG00000004946 #22 nrp2b (ENSDCDG00000004952) #23 nrp2b (ENSDCDG00000005067) #23 ENSDCDG00000003188 ENSDCDG00000003290 prkag3b (ENSDCDG00000003970) FER1L6 (ENSDCDG00000005115) ENSDCDG00000005183 #21 ENSDCDG00000005185 RAPH1 (ENSDCDG00000005222) #19 abi2a (ENSDCDG00000007413) #18 tmem237a (ENSDCDG00000007617) MPP4 (ENSDCDG00000007623) ALS2 (ENSDCDG00000007638) FZD7 (ENSDCDG00000007689) SUMO1 (ENSDCDG00000007696) #8 Otophysi ANCESTRAL SPECIES 203 ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a #35 ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.b ENSGT00390000013916 #14 ENSGT00950000183046.a.a.fb #11 Characiphysae ANCESTRAL SPECIES 3 ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a #35 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #14 Characiphysae_b ANCESTRAL SPECIES 11 ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a #35 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00940000158239.a.b ENSGT00390000013916 #14 Characoidei ANCESTRAL SPECIES 1 ENSGT00940000164444.a ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b ENSGT00950000183165.a.a.b.p ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00940000161508.a #35 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.a.c ENSGT00390000013916 #14 ENSGT00950000183046.a.a.fb #11 Mexicana tetra MODERN SPECIES 10 ihha (ENSAMXG00000002089) ENSAMXG00000005775 ENSAMXG00000034461 TMEM198 (ENSAMXG00000037083) desma (ENSAMXG00000005727) ptprna (ENSAMXG00000005704) dnajb2 (ENSAMXG00000011374) tuba8l3 (ENSAMXG00000030284) tuba8l5 (ENSAMXG00000031158) ENSAMXG00000041817 mnx2a (ENSAMXG00000005665) ENSAMXG00000031720 ENSAMXG00000039421 fn1a (ENSAMXG00000005593) CPO (ENSAMXG00000005569) #35 ENSAMXG00000005554 #22 nrp2b (ENSAMXG00000029255) #23 ABCB6 (ENSAMXG00000016860) ENSAMXG00000016833 ENSAMXG00000016816 prkag3b (ENSAMXG00000016794) FER1L6 (ENSAMXG00000016740) ENSAMXG00000043077 #21 RAPH1 (ENSAMXG00000016673) #19 abi2a (ENSAMXG00000041989) #18 tmem237a (ENSAMXG00000002221) MPP4 (ENSAMXG00000002002) ENSAMXG00000001777 ALS2 (ENSAMXG00000001685) FZD7 (ENSAMXG00000024305) ENSAMXG00000043514 #7 Red-bellied piranha MODERN SPECIES 19 ihha (ENSPNAG00000012235) ENSPNAG00000012231 BIN1 (ENSPNAG00000012203) TMEM198 (ENSPNAG00000002102) desma (ENSPNAG00000002091) ptprna (ENSPNAG00000002070) dnajb2 (ENSPNAG00000011988) tuba8l3 (ENSPNAG00000002009) TUBA4A (ENSPNAG00000011606) mnx2a (ENSPNAG00000011602) ENSPNAG00000001814 ENSPNAG00000011567 fn1a (ENSPNAG00000001773) ENSPNAG00000001704 #35 ENSPNAG00000011342 PARD3B (ENSPNAG00000011335) #22 ENSPNAG00000011310 nrp2b (ENSPNAG00000001661) #23 ABCB6 (ENSPNAG00000011251) ENSPNAG00000011221 prkag3b (ENSPNAG00000001576) FER1L6 (ENSPNAG00000001564) ENSPNAG00000001516 #21 RAPH1 (ENSPNAG00000011070) #19 ENSPNAG00000010959 abi2a (ENSPNAG00000010929) #18 tmem237a (ENSPNAG00000010819) MPP4 (ENSPNAG00000010716) ALS2 (ENSPNAG00000010684) Channel catfish MODERN SPECIES 25 phgdh (ENSIPUG00000010336) klhl23 (ENSIPUG00000010368) mettl5 (ENSIPUG00000010384) ihh (ENSIPUG00000010425) ENSIPUG00000010446 bin1 (ENSIPUG00000010467) TMEM198 (ENSIPUG00000010543) DES (ENSIPUG00000010573) ptprn (ENSIPUG00000010648) dnajb2 (ENSIPUG00000010686) tuba8l3 (ENSIPUG00000010729) mnx2a (ENSIPUG00000010749) cfap65 (ENSIPUG00000010768) ENSIPUG00000010818 fn1a (ENSIPUG00000010834) ENSIPUG00000010916 #22 nrp2b (ENSIPUG00000011051) #23 ENSIPUG00000011119 ENSIPUG00000011147 ttll4 (ENSIPUG00000011178) prkag3b (ENSIPUG00000011296) FER1L6 (ENSIPUG00000011610) ENSIPUG00000011861 #21 raph1 (ENSIPUG00000011891) #19 abi2a (ENSIPUG00000012006) #18 tmem237a (ENSIPUG00000012105) ALS2 (ENSIPUG00000012149) fzd7a (ENSIPUG00000012373) fam117b (ENSIPUG00000012389) #11 Bmpr2 (ENSIPUG00000012409) #10 gpr39 (ENSIPUG00000012486) Cyprinoidei DUPLICATION Cyprinoidei ANCESTRAL SPECIES 59 ENSGT00390000010868 ENSGT00940000164444.a ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e ENSGT00390000016940.c.b.a ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.b ENSGT00940000167284 ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.p.a ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000166348 ENSGT00940000155126.s.b ENSGT00950000183214.a.b.a.b.f.a.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156160.b.b ENSGT00530000068353 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00940000159069 ENSGT00530000063873.B #21 ENSGT00940000156552.c.a #19 ENSGT00940000156089.f #18 ENSGT00390000005159.i ENSGT00940000156444.d ENSGT00940000155861.C.f ENSGT00940000158239.a.b ENSGT00390000013916.g.b #14 ENSGT00950000183046.a.a.fb #11 Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 122 ENSGT00390000010868.g ENSGT00940000164444.a.j ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e.b ENSGT00390000016940.c.b.a.a ENSGT00940000155522.g.a.b ENSGT00940000154095.b.b.a.b.a ENSGT00940000167284.p.b.a ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.o ENSGT00940000160059.a.b.b.d ENSGT00430000031142 ENSGT00940000166348.b ENSGT00940000155126.s.b.a.b ENSGT00950000183214.a.b.a.b.f.a.a.a.a #22 ENSGT00940000155270.i.a.h #23 ENSGT00940000156160.b.b ENSGT00940000157916.f ENSGT00950000183019.f.b.b.c.f.a ENSGT00940000159069.g.b ENSGT00530000063873.B #21 ENSGT00940000156552.c.a.a #19 ENSGT00940000156089.f.b #18 ENSGT00390000005159.i ENSGT00940000156444.d.c ENSGT00940000155861.C.f.h ENSGT00940000158239.a.b ENSGT00390000013916.g.b #14 ENSGT00950000183046.a.a.fb.c.a #11 ENSGT00940000156449.a.a #10 Cyprininae_a ANCESTRAL SPECIES 95 ENSGT00390000010868.g ENSGT00940000164444.a.j ENSGT00950000182953.A ENSGT00950000182882.A.b.b.e.b ENSGT00390000016940.c.b.a.a ENSGT00940000155522.g.a.b ENSGT00940000154095.b.b.a.b.a ENSGT00940000167284.p.b.a ENSGT00950000183165.b.a.e.b.d.a.b.p.b ENSGT00950000183165.b.a.e.b.d.a.a.a.b ENSGT00950000183165.b.a.e.b.d.a.b.o ENSGT00940000160059.a.b.b.d ENSGT00430000031142 ENSGT00940000166348.b ENSGT00940000155126.s.b.a.b ENSGT00950000183214.a.b.a.b.f.a.a.a.a #22 ENSGT00940000155270.i.a.h #23 ENSGT00940000156160.b.b ENSGT00940000157916.f ENSGT00950000183019.f.b.b.c.f.a ENSGT00940000159069.g.b ENSGT00530000063873.B #21 ENSGT00940000156552.c.a.a #19 ENSGT00940000156089.f.b #18 ENSGT00390000005159.i ENSGT00940000156444.d.c ENSGT00940000155861.C.f.h ENSGT00940000158239.a.b ENSGT00390000013916.g.b #14 ENSGT00950000183046.a.a.fb.c.a #11 ENSGT00940000156449.a.a #10 Common carp reference MODERN SPECIES 46 ENSCCRG00000004632 mitd1 (ENSCCRG00000004687) ihha (ENSCCRG00000054515) ENSCCRG00000021320 ENSCCRG00000021338 ENSCCRG00000080691 ptprna (ENSCCRG00000071126) desma (ENSCCRG00000011771) dnajb2 (ENSCCRG00000071393) tuba8l3 (ENSCCRG00000010063) tuba8l5 (ENSCCRG00000060295) mnx2a (ENSCCRG00000073003) ENSCCRG00000068659 ENSCCRG00000064495 fn1a (ENSCCRG00000000854) ENSCCRG00000060738 #22 nrp2b (ENSCCRG00000077747) #23 ENSCCRG00000077003 ENSCCRG00000027136 prkag3b (ENSCCRG00000062058) ENSCCRG00000004252 ENSCCRG00000069803 #19 abi2a (ENSCCRG00000066983) #18 tmem237a (ENSCCRG00000003941) MPP4 (ENSCCRG00000003914) ALS2 (ENSCCRG00000044930) fzd7a (ENSCCRG00000031157) ENSCCRG00000031158 #14 ENSCCRG00000077193 #14 fam117bb (ENSCCRG00000057946) #11 bmpr2b (ENSCCRG00000046124) #10 Goldfish MODERN SPECIES 49 ENSCARG00000067380 creg2 (ENSCARG00000067360) ENSCARG00000067349 mitd1 (ENSCARG00000067315) ihha (ENSCARG00000067304) ENSCARG00000067283 BIN1 (ENSCARG00000067097) TMEM198 (ENSCARG00000067059) desma (ENSCARG00000066972) ptprna (ENSCARG00000066530) dnajb2 (ENSCARG00000066492) tuba8l3 (ENSCARG00000066483) mnx2a (ENSCARG00000066460) ENSCARG00000066428 fn1a (ENSCARG00000064711) ENSCARG00000064592 #22 ENSCARG00000064580 nrp2b (ENSCARG00000063747) #23 ABCB6 (ENSCARG00000061474) ENSCARG00000061091 prkag3b (ENSCARG00000060959) ENSCARG00000059288 ENSCARG00000059106 #21 RAPH1 (ENSCARG00000059025) #19 abi2a (ENSCARG00000058606) #18 tmem237a (ENSCARG00000058541) MPP4 (ENSCARG00000058403) ALS2 (ENSCARG00000058302) fzd7a (ENSCARG00000058275) CARF (ENSCARG00000058221) #14 fam117bb (ENSCARG00000058201) #11 Cyprininae ANCESTRAL SPECIES 759 ENSGT00950000182882.A.b.b.e.a ENSGT00390000016940.c.b.a.b ENSGT00940000155522.g.a.a ENSGT00940000154095.b.b.a.b.b ENSGT00940000167284.p.b.b ENSGT00950000183165.b.a.e.b.d.a.b.p.a ENSGT00940000160059.a.b.b.c ENSGT00940000166348.a ENSGT00940000155126.s.b.a.a ENSGT00950000183214.a.b.a.b.f.a.a.a.b #22 Cyprininae_a ANCESTRAL SPECIES 126 ENSGT00940000164275.e ENSGT00940000159177.h ENSGT00390000005914.b.a.b ENSGT00940000163031.b.a.b.a ENSGT00390000010868.h ENSGT00940000164444.a.i ENSGT00950000182882.A.b.b.e.a ENSGT00390000016940.c.b.a.b ENSGT00940000155522.g.a.a ENSGT00940000154095.b.b.a.b.b ENSGT00940000167284.p.b.b ENSGT00950000183165.b.b ENSGT00940000160059.a.b.b.c ENSGT00940000166348.a ENSGT00940000155126.s.b.a.a ENSGT00950000183214.a.b.a.b.f.a.a.a.b #22 Common carp reference MODERN SPECIES 41 fhl2a (ENSCCRG00000006856) GPR45 (ENSCCRG00000074077) pou3f3a (ENSCCRG00000006869) tmem182a (ENSCCRG00000047850) MFSD9 (ENSCCRG00000081946) inpp4aa (ENSCCRG00000052641) si:dkey-4e7.3 (ENSCCRG00000044028) ENSCCRG00000044039 ENSCCRG00000038329 ihha (ENSCCRG00000021319) ENSCCRG00000011773 ENSCCRG00000053719 desma (ENSCCRG00000034567) ptprna (ENSCCRG00000034582) dnajb2 (ENSCCRG00000064837) ENSCCRG00000076394 #22 tuba8l3 (ENSCCRG00000034603) ENSCCRG00000000795 ENSCCRG00000072723 ENSCCRG00000000774 ENSCCRG00000011725 #23 ENSCCRG00000066621 ENSCCRG00000037457 prkag3b (ENSCCRG00000059317) ENSCCRG00000005693 ENSCCRG00000072640 ENSCCRG00000004178 #19 abi2a (ENSCCRG00000003969) #18 ENSCCRG00000004189 ENSCCRG00000029304 ENSCCRG00000073703 #7 Cyprininae ANCESTRAL SPECIES 1357 ENSGT00950000183214.a.b.a.b.f.a.a.b #22 ENSGT00940000155270.i.a.g #23 Cyprininae_a ANCESTRAL SPECIES 210 ENSGT00950000183214.a.b.a.b.f.a.a.b #22 ENSGT00940000155270.i.a.g #23 ENSGT00940000157916.e ENSGT00950000183019.f.b.b.c.g ENSGT00940000159069.h ENSGT00940000174369 ENSGT00940000156552.c.a.b #19 ENSGT00940000156089.f.a #18 ENSGT00940000156444.d.d ENSGT00940000155861.C.f.g ENSGT00860000133854 #7 ENSGT00950000183046.a.a.fb.c.b #11 ENSGT00940000156449.a.b #10 ENSGT00940000161051.a.a.a.a.a.b ENSGT00940000154856.A.a.d.a ENSGT00940000181146.a Golden-line barbel MODERN SPECIES 161 ENSSGRG00000035513 #22 nrp2b (ENSSGRG00000035511) #23 ENSSGRG00000035439 prkag3b (ENSSGRG00000035315) ENSSGRG00000035280 ENSSGRG00000035275 RAPH1 (ENSSGRG00000035192) #19 abi2a (ENSSGRG00000034353) #18 MPP4 (ENSSGRG00000034221) ALS2 (ENSSGRG00000034030) bmpr2b (ENSSGRG00000033981) #10 ENSSGRG00000033621 ENSSGRG00000033455 ENSSGRG00000033449 ENSSGRG00000033447 glb1l (ENSSGRG00000033446) Zebrafish MODERN SPECIES 24 slain1a (ENSDARG00000019185) scel (ENSDARG00000034677) mycbp2 (ENSDARG00000001220) fbxl3a (ENSDARG00000103505) CLN5 (ENSDARG00000076339) RSPH1 (ENSDARG00000102261) EPHA3 (ENSDARG00000039373) C9H3orf38 (ENSDARG00000076798) MYO1B (ENSDARG00000024694) upp2 (ENSDARG00000036833) crfb4 (ENSDARG00000068711) ENSDARG00000068713 znfl1b (ENSDARG00000075996) ENSDARG00000095057 fn1a (ENSDARG00000019815) ENSDARG00000034555 #22 nrp2b (ENSDARG00000038446) #23 ENSDARG00000113678 ABCB6 (ENSDARG00000074254) ENSDARG00000095580 ENSDARG00000078935 prkag3b (ENSDARG00000000369) FER1L6 (ENSDARG00000019316) ENSDARG00000086317 ENSDARG00000078193 ENSDARG00000069978 ENSDARG00000095070 #21 RAPH1 (ENSDARG00000006301) #19 abi2a (ENSDARG00000058207) #18 tmem237a (ENSDARG00000041735) MPP4 (ENSDARG00000058222) Cyprinoidei ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a.b #22 Cyprininae_a ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a.b #22 Golden-line barbel MODERN SPECIES 219 ENSSGRG00000000125 #22 nrp2b (ENSSGRG00000054601) #23 ABCB6 (ENSSGRG00000054575) ENSSGRG00000054496 #21 RAPH1 (ENSSGRG00000054491) #19 abi2a (ENSSGRG00000054354) #18 tmem237a (ENSSGRG00000054344) ENSSGRG00000054343 ALS2 (ENSSGRG00000054333) fzd7a (ENSSGRG00000054326) CARF (ENSSGRG00000054325) #14 fam117bb (ENSSGRG00000054324) #11 bmpr2b (ENSSGRG00000054319) #10 ENSSGRG00000054316 ENSSGRG00000054302 ENSSGRG00000054279 Euteleosteomorpha ANCESTRAL SPECIES 303 ENSGT00550000075037 ENSGT00940000160059.a.b.a ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00940000161508.b #35 ENSGT00390000003338 ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a #22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a #22 Huchen MODERN SPECIES 5047 ENSHHUG00000050072 #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a #22 Rainbow trout MODERN SPECIES 21 ENSOMYG00000074984 ENSOMYG00000068449 ENSOMYG00000076231 ENSOMYG00000054031 ENSOMYG00000059150 ENSOMYG00000069527 #23 ENSOMYG00000051460 ENSOMYG00000059597 ENSOMYG00000064538 ENSOMYG00000001248 ENSOMYG00000061098 ENSOMYG00000052160 ENSOMYG00000065526 ENSOMYG00000061862 ENSOMYG00000074256 ENSOMYG00000039142 #22 ENSOMYG00000077773 ENSOMYG00000073984 ENSOMYG00000075835 ENSOMYG00000071479 ENSOMYG00000065519 desma (ENSOMYG00000001179) ENSOMYG00000076248 ENSOMYG00000064712 ENSOMYG00000055062 ENSOMYG00000069540 ENSOMYG00000076355 ihha (ENSOMYG00000074753) ENSOMYG00000057958 si:dkey-69o16.5 (ENSOMYG00000004844) ENSOMYG00000048184 Salmo ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a #22 Atlantic salmon MODERN SPECIES 17 itgav (ENSSSAG00000075460) si:dkey-69o16.5 (ENSSSAG00000040115) ihha (ENSSSAG00000039898) ENSSSAG00000039879 ENSSSAG00000100301 ENSSSAG00000040610 desma (ENSSSAG00000040563) ptprna (ENSSSAG00000075911) ENSSSAG00000040783 tuba8l5 (ENSSSAG00000040575) mnx2a (ENSSSAG00000083646) ENSSSAG00000087981 ENSSSAG00000040992 ENSSSAG00000121057 ENSSSAG00000041103 ENSSSAG00000103028 #22 ENSSSAG00000111983 ENSSSAG00000085403 ENSSSAG00000097568 #23 ENSSSAG00000110186 ENSSSAG00000101860 ENSSSAG00000113090 ENSSSAG00000097375 CTLA4 (ENSSSAG00000093109) #21 ENSSSAG00000099334 ENSSSAG00000041203 #19 abi2a (ENSSSAG00000117505) #18 ENSSSAG00000121545 #18 ENSSSAG00000120995 ENSSSAG00000101504 ENSSSAG00000113315 Northern pike MODERN SPECIES 19 ENSELUG00000025144 ENSELUG00000030488 ENSELUG00000012601 ENSELUG00000034349 ENSELUG00000028156 ENSELUG00000029623 ENSELUG00000012109 ENSELUG00000028208 ENSELUG00000012093 ENSELUG00000025171 ENSELUG00000000437 ENSELUG00000031444 ENSELUG00000033051 ENSELUG00000012070 ENSELUG00000011821 ENSELUG00000000432 #22 ENSELUG00000028124 ENSELUG00000011702 nrp2b (ENSELUG00000011774) #23 ENSELUG00000029513 ENSELUG00000011632 ENSELUG00000011646 ENSELUG00000031723 ENSELUG00000011668 ENSELUG00000027299 ENSELUG00000001761 ENSELUG00000032766 ENSELUG00000026569 prkag3b (ENSELUG00000011611) ENSELUG00000011554 ABCB6 (ENSELUG00000000885) Acanthomorphata ANCESTRAL SPECIES 149 ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT01030000235142 ENSGT00940000165586.a ENSGT00940000163794 Euacanthomorphacea ANCESTRAL SPECIES 15 ENSGT00950000183165.b.b.b ENSGT00950000183038.a.b.b.b.r ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Percomorphaceae ANCESTRAL SPECIES 29 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Tiger tail seahorse MODERN SPECIES 313 PFKL (ENSHCOG00000017753) TMEM169 (ENSHCOG00000017761) xrcc5 (ENSHCOG00000017773) COL6A2 (ENSHCOG00000017794) MARCHF4 (ENSHCOG00000017906) SMARCAL1 (ENSHCOG00000017921) ENSHCOG00000017928 nme9 (ENSHCOG00000017975) zgc:162707 (ENSHCOG00000017988) ehhadh (ENSHCOG00000018012) tmem41aa (ENSHCOG00000018036) igf2bp2a (ENSHCOG00000018090) ANKZF1 (ENSHCOG00000018225) glb1l (ENSHCOG00000018244) ENSHCOG00000018260 ENSHCOG00000018273 #22 nrp2b (ENSHCOG00000018329) #23 epb41l5 (ENSHCOG00000018374) ptpn4a (ENSHCOG00000018430) tmem177 (ENSHCOG00000018441) MRAS (ENSHCOG00000018456) ALS2 (ENSHCOG00000018508) fzd7b (ENSHCOG00000018538) ENSHCOG00000018620 ENSHCOG00000018634 ENSHCOG00000018646 ENSHCOG00000018666 ENSHCOG00000018675 ENSHCOG00000018719 agpat3 (ENSHCOG00000018746) pdxka (ENSHCOG00000018782) Percomorphaceae_B ANCESTRAL SPECIES 17 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Percomorphaceae_C ANCESTRAL SPECIES 13 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Eupercaria ANCESTRAL SPECIES 25 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Eupecaria_A ANCESTRAL SPECIES 24 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Ballan wrasse MODERN SPECIES 115 BZW1 (ENSLBEG00000021455) MYO1B (ENSLBEG00000021539) ENSLBEG00000021699 ENSLBEG00000021710 ENSLBEG00000021771 ##34 WNT6 (ENSLBEG00000021893) wnt10a (ENSLBEG00000021913) cdk5r2b (ENSLBEG00000021930) fev (ENSLBEG00000021947) cryba2b (ENSLBEG00000021959) umps (ENSLBEG00000022046) fn1a (ENSLBEG00000022253) ENSLBEG00000022373 ENSLBEG00000022395 #35 ENSLBEG00000022413 ENSLBEG00000022424 #22 ENSLBEG00000022443 ENSLBEG00000022475 Eupecaria_B ANCESTRAL SPECIES 24 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Eupecaria_C ANCESTRAL SPECIES 24 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 24 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a European seabass MODERN SPECIES 5 ENSDLAG00005020142 ENSDLAG00005018867 ENSDLAG00005018786 ENSDLAG00005016648 ENSDLAG00005033314 ENSDLAG00005016565 WNT6 (ENSDLAG00005028524) wnt10a (ENSDLAG00005016532) cdk5r2b (ENSDLAG00005016521) fev (ENSDLAG00005029495) cryba2b (ENSDLAG00005033399) umps (ENSDLAG00005016251) ENSDLAG00005014378 ENSDLAG00005034629 ENSDLAG00005014284 #35 ENSDLAG00005014196 #22 ENSDLAG00005035118 #23 epb41l5 (ENSDLAG00005014094) ENSDLAG00005013780 ENSDLAG00005030809 ENSDLAG00005013762 ENSDLAG00005013612 ENSDLAG00005013553 ENSDLAG00005013344 tmem163a (ENSDLAG00005027257) acmsd (ENSDLAG00005013226) ENSDLAG00005013136 ccnt2a (ENSDLAG00005032702) ENSDLAG00005013114 ube2f (ENSDLAG00005013086) ENSDLAG00005029675 Large yellow croaker MODERN SPECIES 490 RALB (ENSLCRG00005020626) LRP1B (ENSLCRG00005020331) BZW1 (ENSLCRG00005020277) MYO1B (ENSLCRG00005020255) ENSLCRG00005020244 ENSLCRG00005020241 WNT6 (ENSLCRG00005020239) wnt10a (ENSLCRG00005020237) cdk5r2b (ENSLCRG00005020236) fev (ENSLCRG00005020233) cryba2b (ENSLCRG00005020230) umps (ENSLCRG00005020227) fn1a (ENSLCRG00005009972) ENSLCRG00005009866 ENSLCRG00005009860 #35 ENSLCRG00005009846 #22 nrp2b (ENSLCRG00005009196) #23 epb41l5 (ENSLCRG00005009116) ptpn4a (ENSLCRG00005009097) tmem177 (ENSLCRG00005009093) ENSLCRG00005009091 MRAS (ENSLCRG00005009090) pth2ra (ENSLCRG00005009081) ENSLCRG00005009076 tmem163a (ENSLCRG00005009073) acmsd (ENSLCRG00005009053) ENSLCRG00005009050 ccnt2a (ENSLCRG00005008833) ENSLCRG00005008825 ramp1 (ENSLCRG00005008824) ENSLCRG00005008823 Gilthead seabream MODERN SPECIES 23 LRP1B (ENSSAUG00010004236) BZW1 (ENSSAUG00010004726) MYO1B (ENSSAUG00010004914) ENSSAUG00010009001 ENSSAUG00010009005 ENSSAUG00010009018 ##34 WNT6 (ENSSAUG00010009019) wnt10a (ENSSAUG00010009021) cdk5r2b (ENSSAUG00010009022) fev (ENSSAUG00010009023) cryba2b (ENSSAUG00010009024) umps (ENSSAUG00010009026) fn1a (ENSSAUG00010009061) ENSSAUG00010010189 ENSSAUG00010010190 #35 ENSSAUG00010010192 #22 nrp2b (ENSSAUG00010010220) #23 epb41l5 (ENSSAUG00010012341) ptpn4a (ENSSAUG00010012414) tmem177 (ENSSAUG00010012606) ENSSAUG00010012609 MRAS (ENSSAUG00010012612) pth2ra (ENSSAUG00010012615) ENSSAUG00010012650 ENSSAUG00010012656 tmem163a (ENSSAUG00010012666) acmsd (ENSSAUG00010012673) ccnt2a (ENSSAUG00010012679) ENSSAUG00010012688 ramp1 (ENSSAUG00010012699) ube2f (ENSSAUG00010012700) Perciformes ANCESTRAL SPECIES 23 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.h ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Cottioidei ANCESTRAL SPECIES 14 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000234640.a.b.a.a.a.a.a.b.a.a.a ENSGT01030000234640.a.b.a.a.a.a.a.a ENSGT00940000156444.d ENSGT00390000005159.i ENSGT00940000156089.e.b #18 ENSGT00390000006356 ENSGT00950000183097.a.a.b ENSGT00550000075118.l Lumpfish MODERN SPECIES 13 LRP1B (ENSCLMG00005017411) BZW1 (ENSCLMG00005017429) MYO1B (ENSCLMG00005017521) ENSCLMG00005017740 ENSCLMG00005017750 WNT6 (ENSCLMG00005017757) wnt10a (ENSCLMG00005017759) cdk5r2b (ENSCLMG00005017762) fev (ENSCLMG00005017765) cryba2b (ENSCLMG00005017766) umps (ENSCLMG00005017772) fn1a (ENSCLMG00005018201) ENSCLMG00005020690 ENSCLMG00005020714 #35 ENSCLMG00005020715 ENSCLMG00005020718 #22 NRP2 (ENSCLMG00005020735) #23 epb41l5 (ENSCLMG00005020797) ptpn4a (ENSCLMG00005020800) tmem177 (ENSCLMG00005020802) ENSCLMG00005020803 MRAS (ENSCLMG00005020804) pth2ra (ENSCLMG00005020806) ENSCLMG00005020807 ENSCLMG00005020808 ENSCLMG00005020810 ENSCLMG00005020811 ENSCLMG00005020812 ENSCLMG00005020813 ENSCLMG00005020814 ENSCLMG00005020816 Stickleback MODERN SPECIES 16 ENSGACG00000007473 RALB (ENSGACG00000007498) LRP1B (ENSGACG00000007503) BZW1 (ENSGACG00000007556) MYO1B (ENSGACG00000007578) ENSGACG00000007589 ##34 WNT6 (ENSGACG00000007593) wnt10a (ENSGACG00000007605) cdk5r2b (ENSGACG00000007612) fev (ENSGACG00000007619) cryba2b (ENSGACG00000007624) umps (ENSGACG00000007660) fn1a (ENSGACG00000007714) ENSGACG00000007737 ENSGACG00000007739 #35 ENSGACG00000007753 #22 nrp2b (ENSGACG00000007758) #23 epb41l5 (ENSGACG00000007774) ptpn4a (ENSGACG00000007798) tmem177 (ENSGACG00000007813) MRAS (ENSGACG00000007818) pth2ra (ENSGACG00000007845) ENSGACG00000007859 ENSGACG00000007864 ENSGACG00000007868 ENSGACG00000007870 ENSGACG00000007874 ENSGACG00000007875 ENSGACG00000007878 ENSGACG00000007880 ENSGACG00000007881 Perciformes_a ANCESTRAL SPECIES 23 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.h ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Channel bull blenny MODERN SPECIES 13 BZW1 (ENSCGOG00000020174) MYO1B (ENSCGOG00000017546) ENSCGOG00000017473 ENSCGOG00000017471 ENSCGOG00000017464 ENSCGOG00000017461 ##34 WNT6 (ENSCGOG00000017458) wnt10a (ENSCGOG00000017451) cdk5r2b (ENSCGOG00000017449) fev (ENSCGOG00000017448) cryba2b (ENSCGOG00000017440) umps (ENSCGOG00000017423) fn1a (ENSCGOG00000016623) ENSCGOG00000016596 CPO (ENSCGOG00000016592) #35 ENSCGOG00000016587 #22 ENSCGOG00000016585 nrp2b (ENSCGOG00000015388) #23 epb41l5 (ENSCGOG00000014584) ptpn4a (ENSCGOG00000014011) tmem177 (ENSCGOG00000014003) MRAS (ENSCGOG00000014001) pth2ra (ENSCGOG00000013842) ENSCGOG00000013809 ENSCGOG00000013790 ENSCGOG00000013782 tmem163a (ENSCGOG00000013778) acmsd (ENSCGOG00000013763) ccnt2a (ENSCGOG00000013482) ENSCGOG00000013475 ramp1 (ENSCGOG00000013471) Pike perch MODERN SPECIES 57 nepro (ENSSLUG00000002669) RALB (ENSSLUG00000002676) LRP1B (ENSSLUG00000002688) BZW1 (ENSSLUG00000002722) MYO1B (ENSSLUG00000002916) ENSSLUG00000006332 ENSSLUG00000006355 WNT6 (ENSSLUG00000006365) wnt10a (ENSSLUG00000006369) cdk5r2b (ENSSLUG00000006375) fev (ENSSLUG00000006380) cryba2b (ENSSLUG00000006395) umps (ENSSLUG00000006433) fn1a (ENSSLUG00000006503) ENSSLUG00000007495 #35 ENSSLUG00000007517 #22 nrp2b (ENSSLUG00000007719) #23 epb41l5 (ENSSLUG00000010910) ptpn4a (ENSSLUG00000010922) tmem177 (ENSSLUG00000010936) ENSSLUG00000010938 ENSSLUG00000010940 MRAS (ENSSLUG00000010942) pth2ra (ENSSLUG00000010943) ENSSLUG00000010948 ENSSLUG00000010961 TMEM163 (ENSSLUG00000010973) Tetraodontidae ANCESTRAL SPECIES ENSGT00940000163874 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000163794.h ENSGT00940000163794.g.a Fugu MODERN SPECIES ENSTRUG00000006976 nepro (ENSTRUG00000020076) RALB (ENSTRUG00000006857) BZW1 (ENSTRUG00000005576) MYO1B (ENSTRUG00000004277) ENSTRUG00000004181 ENSTRUG00000021136 WNT6 (ENSTRUG00000022464) wnt10a (ENSTRUG00000003255) ENSTRUG00000031853 fev (ENSTRUG00000003136) cryba2b (ENSTRUG00000002508) umps (ENSTRUG00000002053) fn1a (ENSTRUG00000001374) ENSTRUG00000001358 ENSTRUG00000002389 #22 nrp2b (ENSTRUG00000003723) #23 epb41l5 (ENSTRUG00000005009) ptpn4a (ENSTRUG00000005419) tmem177 (ENSTRUG00000023228) mras (ENSTRUG00000032019) pth2 (ENSTRUG00000006000) ENSTRUG00000008190 tmem163a (ENSTRUG00000008099) acmsd (ENSTRUG00000007957) ccnt2a (ENSTRUG00000023299) MAP3K19 (ENSTRUG00000026412) ramp1 (ENSTRUG00000007700) ube2f (ENSTRUG00000007527) zgc:162396 (ENSTRUG00000010648) ENSTRUG00000032205 Tetraodon MODERN SPECIES 13 RALB (ENSTNIG00000014250) LRP1B (ENSTNIG00000017043) BZW1 (ENSTNIG00000017044) MYO1B (ENSTNIG00000017045) ENSTNIG00000017046 ENSTNIG00000001742 ENSTNIG00000017047 WNT6 (ENSTNIG00000017048) wnt10a (ENSTNIG00000017049) cdk5r2b (ENSTNIG00000001286) fev (ENSTNIG00000017050) cryba2b (ENSTNIG00000017051) umps (ENSTNIG00000017052) fn1a (ENSTNIG00000017053) ENSTNIG00000001642 ENSTNIG00000017054 #22 nrp2b (ENSTNIG00000007570) #23 epb41l5 (ENSTNIG00000007569) ptpn4a (ENSTNIG00000007568) tmem177 (ENSTNIG00000007567) MRAS (ENSTNIG00000007566) pth2ra (ENSTNIG00000007565) acmsd (ENSTNIG00000007564) ccnt2a (ENSTNIG00000007563) ENSTNIG00000007562 ramp1 (ENSTNIG00000007561) ube2f (ENSTNIG00000007560) ENSTNIG00000007559 zgc:162396 (ENSTNIG00000001485) ENSTNIG00000001712 ENSTNIG00000000966 Percomorphaceae_D ANCESTRAL SPECIES 12 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Carangaria ANCESTRAL SPECIES 12 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a Pleuronectoidei ANCESTRAL SPECIES 9 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Tongue sole MODERN SPECIES 7 ENSCSEG00000019038 ramp1 (ENSCSEG00000019063) ube2f (ENSCSEG00000019066) ENSCSEG00000019093 ENSCSEG00000019103 ENSCSEG00000019115 ENSCSEG00000019130 ADARB1 (ENSCSEG00000019137) agr1 (ENSCSEG00000019148) traf3ip1 (ENSCSEG00000019157) asb1 (ENSCSEG00000019185) fev (ENSCSEG00000019191) cryba2b (ENSCSEG00000019194) umps (ENSCSEG00000019200) fn1a (ENSCSEG00000019211) ENSCSEG00000019628 #22 ENSCSEG00000019637 nrp2b (ENSCSEG00000019639) #23 LRP1B (ENSCSEG00000019647) BZW1 (ENSCSEG00000019691) MYO1B (ENSCSEG00000019699) ENSCSEG00000019713 ENSCSEG00000019718 WNT6 (ENSCSEG00000019725) wnt10a (ENSCSEG00000019730) cdk5r2b (ENSCSEG00000019737) Turbot MODERN SPECIES 5 poglut2 (ENSSMAG00000006626) nepro (ENSSMAG00000006603) ENSSMAG00000006572 ENSSMAG00000005800 ENSSMAG00000005715 ENSSMAG00000005494 ENSSMAG00000005470 ENSSMAG00000005437 WNT6 (ENSSMAG00000005428) wnt10a (ENSSMAG00000005418) fev (ENSSMAG00000023246) cryba2b (ENSSMAG00000005379) umps (ENSSMAG00000005356) ENSSMAG00000026422 ENSSMAG00000005217 #35 ENSSMAG00000005176 #22 ENSSMAG00000005109 #23 epb41l5 (ENSSMAG00000005045) ptpn4a (ENSSMAG00000004821) tmem177 (ENSSMAG00000023201) ENSSMAG00000028509 ENSSMAG00000004781 ENSSMAG00000032315 ENSSMAG00000004754 tmem163a (ENSSMAG00000004716) acmsd (ENSSMAG00000004685) ccnt2a (ENSSMAG00000004571) ENSSMAG00000004542 ramp1 (ENSSMAG00000033979) ube2f (ENSSMAG00000004518) ENSSMAG00000004498 Carangaria_A ANCESTRAL SPECIES 11 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT01030000235506 ENSGT00940000164905.i.b.a.a ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a Barramundi perch MODERN SPECIES 244 MYO1B (ENSLCAG00010027636) mnx2a (ENSLCAG00010027627) ENSLCAG00010027624 ENSLCAG00010027622 ENSLCAG00010027618 ENSLCAG00010027616 ##34 WNT6 (ENSLCAG00010027615) wnt10a (ENSLCAG00010027614) cdk5r2b (ENSLCAG00010027613) fev (ENSLCAG00010027612) cryba2b (ENSLCAG00010027610) umps (ENSLCAG00010027608) fn1a (ENSLCAG00010026990) ENSLCAG00010026823 ENSLCAG00010026820 #35 ENSLCAG00010026813 #22 Seriola ANCESTRAL SPECIES 34 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.a.a ENSGT00940000164905.i.b.a.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a Greater amberjack MODERN SPECIES 21 BZW1 (ENSSDUG00000011658) MYO1B (ENSSDUG00000011442) ENSSDUG00000011392 ENSSDUG00000011302 ENSSDUG00000011277 ##34 WNT6 (ENSSDUG00000011257) wnt10a (ENSSDUG00000011248) cdk5r2b (ENSSDUG00000011231) fev (ENSSDUG00000011221) cryba2b (ENSSDUG00000011208) umps (ENSSDUG00000011183) umps (ENSSDUG00000011174) umps (ENSSDUG00000011159) fn1a (ENSSDUG00000011068) ENSSDUG00000010992 #35 ENSSDUG00000010939 #22 nrp2b (ENSSDUG00000010828) #23 epb41l5 (ENSSDUG00000010789) ptpn4a (ENSSDUG00000010750) tmem177 (ENSSDUG00000010744) ENSSDUG00000010701 MRAS (ENSSDUG00000010675) pth2ra (ENSSDUG00000010644) ENSSDUG00000010633 ENSSDUG00000010619 tmem163a (ENSSDUG00000010582) acmsd (ENSSDUG00000010546) ccnt2a (ENSSDUG00000010512) ENSSDUG00000010471 ramp1 (ENSSDUG00000010459) ube2f (ENSSDUG00000010350) Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 3086 MYO1B (ENSSLDG00000022217) ENSSLDG00000022259 ENSSLDG00000022285 ENSSLDG00000022331 ##34 WNT6 (ENSSLDG00000022349) wnt10a (ENSSLDG00000022364) cdk5r2b (ENSSLDG00000022392) fev (ENSSLDG00000022400) cryba2b (ENSSLDG00000022419) umps (ENSSLDG00000022454) umps (ENSSLDG00000022559) fn1a (ENSSLDG00000022581) ENSSLDG00000022638 ENSSLDG00000022653 #35 ENSSLDG00000022732 ENSSLDG00000022740 #22 ENSSLDG00000022746 #22 nrp2b (ENSSLDG00000022769) #23 Yellowtail amberjack MODERN SPECIES 3086 ENSSLDG00000022259 ENSSLDG00000022285 ENSSLDG00000022331 ##34 WNT6 (ENSSLDG00000022349) wnt10a (ENSSLDG00000022364) cdk5r2b (ENSSLDG00000022392) fev (ENSSLDG00000022400) cryba2b (ENSSLDG00000022419) umps (ENSSLDG00000022454) umps (ENSSLDG00000022559) fn1a (ENSSLDG00000022581) ENSSLDG00000022638 ENSSLDG00000022653 #35 ENSSLDG00000022732 ENSSLDG00000022740 #22 ENSSLDG00000022746 #22 nrp2b (ENSSLDG00000022769) #23 Anabantaria ANCESTRAL SPECIES 14 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Anabantoidei ANCESTRAL SPECIES 13 ENSGT00390000007644 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Climbing perch MODERN SPECIES 12 ENSATEG00000026473 ENSATEG00000027644 ENSATEG00000012956 #22 ENSATEG00000012388 #23 epb41l5 (ENSATEG00000012315) ptpn4a (ENSATEG00000012178) tmem177 (ENSATEG00000012138) ENSATEG00000012132 ENSATEG00000012108 ENSATEG00000012066 ENSATEG00000025555 ENSATEG00000012016 tmem163a (ENSATEG00000029796) acmsd (ENSATEG00000011948) ccnt2a (ENSATEG00000011936) MAP3K19 (ENSATEG00000011930) ramp1 (ENSATEG00000011922) ENSATEG00000011881 Zig-zag eel MODERN SPECIES 13 ENSMAMG00000014728 ENSMAMG00000014694 ENSMAMG00000014621 ENSMAMG00000014613 ENSMAMG00000014546 WNT6 (ENSMAMG00000014507) wnt10a (ENSMAMG00000014474) cdk5r2b (ENSMAMG00000014465) fev (ENSMAMG00000014450) cryba2b (ENSMAMG00000014432) umps (ENSMAMG00000014385) ENSMAMG00000014337 ENSMAMG00000014293 ENSMAMG00000014257 #35 ENSMAMG00000014199 ENSMAMG00000014135 #22 ENSMAMG00000013943 #23 ENSMAMG00000026386 epb41l5 (ENSMAMG00000013901) ptpn4a (ENSMAMG00000013766) tmem177 (ENSMAMG00000013743) MRAS (ENSMAMG00000024499) ENSMAMG00000013608 ENSMAMG00000025502 tmem163a (ENSMAMG00000027963) acmsd (ENSMAMG00000013500) ccnt2a (ENSMAMG00000013387) ENSMAMG00000025754 ENSMAMG00000013315 ramp1 (ENSMAMG00000013305) ENSMAMG00000013272 Ovalentaria ANCESTRAL SPECIES 14 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 Atherinomorphae ANCESTRAL SPECIES 13 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Cyprinodontiformes ANCESTRAL SPECIES 15 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Aplocheiloidei DUPLICATION Aplocheiloidei ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.a.e #22 Turquoise killifish MODERN SPECIES 1615 ENSNFUG00015000205 ENSNFUG00015000186 ENSNFUG00015000175 ENSNFUG00015023970 ADAMTS5 (ENSNFUG00015023939) ADAMTS1 (ENSNFUG00015023932) cyyr1 (ENSNFUG00015023928) APP (ENSNFUG00015022910) atp5pf (ENSNFUG00015022776) JAM2A (ENSNFUG00015022774) MRPL39 (ENSNFUG00015022769) rap2ab (ENSNFUG00015022765) mbnl2 (ENSNFUG00015022750) ENSNFUG00015022735 ENSNFUG00015022734 ENSNFUG00015022718 #22 NRP2 (ENSNFUG00015022587) #23 ENSNFUG00015022569 abcb6a (ENSNFUG00015021916) cnppd1 (ENSNFUG00015021868) ENSNFUG00015021844 FAM134A (ENSNFUG00015021837) mdh1b (ENSNFUG00015021836) #33 FASTKD2 (ENSNFUG00015021833) #34 ENSNFUG00015021828 raph1b (ENSNFUG00015021263) #19 ALG11 (ENSNFUG00015021241) cpb2 (ENSNFUG00015021229) ZC3H13 (ENSNFUG00015021222) chst10 (ENSNFUG00015021219) MAP4K4 (ENSNFUG00015020909) Aplocheiloidei ANCESTRAL SPECIES 48 ENSGT00940000154829.j ENSGT00950000183058.A.a.d ENSGT00950000183058.A.b.b ENSGT00390000018895.a ENSGT00390000000155.a.a ENSGT00940000175225 ENSGT01090000259985.b.b.a.a.l ENSGT01090000259985.b.b.a.b ENSGT00390000010218 ENSGT00550000075037 ENSGT00940000164719.b ENSGT00390000004553 ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a.f #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Mangrove rivulus MODERN SPECIES 54 nepro (ENSKMAG00000015939) ENSKMAG00000015958 LRP1B (ENSKMAG00000016057) BZW1 (ENSKMAG00000016408) MYO1B (ENSKMAG00000016504) ENSKMAG00000016838 ENSKMAG00000016853 WNT6 (ENSKMAG00000016866) wnt10a (ENSKMAG00000016880) cdk5r2b (ENSKMAG00000016892) fev (ENSKMAG00000016896) cryba2b (ENSKMAG00000016906) umps (ENSKMAG00000016976) fn1a (ENSKMAG00000017093) ENSKMAG00000017534 ENSKMAG00000017559 #22 nrp2b (ENSKMAG00000017635) #23 epb41l5 (ENSKMAG00000017717) ptpn4a (ENSKMAG00000017779) tmem177 (ENSKMAG00000017878) mras (ENSKMAG00000017893) pth2ra (ENSKMAG00000017976) ENSKMAG00000018125 tmem163a (ENSKMAG00000018154) acmsd (ENSKMAG00000018206) ccnt2a (ENSKMAG00000018253) MAP3K19 (ENSKMAG00000018284) ramp1 (ENSKMAG00000018344) ube2f (ENSKMAG00000018359) zgc:162780 (ENSKMAG00000018418) zgc:162396 (ENSKMAG00000018426) Turquoise killifish MODERN SPECIES 1623 BZW1 (ENSNFUG00015023133) MYO1B (ENSNFUG00015022959) ENSNFUG00015022925 ENSNFUG00015022917 ENSNFUG00015022884 WNT6B (ENSNFUG00015022875) wnt10a (ENSNFUG00015022870) ENSNFUG00015022866 CDK5R2B (ENSNFUG00015022863) ENSNFUG00015022860 cryba2b (ENSNFUG00015022856) umps (ENSNFUG00015022850) FN1 (ENSNFUG00015020678) ENSNFUG00015020593 ENSNFUG00015020592 ENSNFUG00015020585 #22 ENSNFUG00015020577 nrp2b (ENSNFUG00015019291) #23 ENSNFUG00015019259 epb41l5 (ENSNFUG00015019190) PTPN4A (ENSNFUG00015019139) TMEM177 (ENSNFUG00015019125) MRAS (ENSNFUG00015019107) pth2ra (ENSNFUG00015018783) ENSNFUG00015018765 ENSNFUG00015018503 TMEM163A (ENSNFUG00015018496) acmsd (ENSNFUG00015018394) ccnt2a (ENSNFUG00015018257) MAP3K19 (ENSNFUG00015018126) ENSNFUG00015018121 Cyprinodontoidei ANCESTRAL SPECIES 13 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Poeciliinae ANCESTRAL SPECIES 25 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00980000202775 ENSGT00940000160383 ENSGT00940000159224.a Platyfish MODERN SPECIES 21 nepro (ENSXMAG00000023956) RALB (ENSXMAG00000023293) LRP1B (ENSXMAG00000011528) BZW1 (ENSXMAG00000010531) MYO1B (ENSXMAG00000016513) ENSXMAG00000027035 ENSXMAG00000027986 WNT6 (ENSXMAG00000001793) wnt10a (ENSXMAG00000024708) cdk5r2b (ENSXMAG00000020059) ENSXMAG00000001805 cryba2b (ENSXMAG00000001807) umps (ENSXMAG00000001814) fn1a (ENSXMAG00000001821) ENSXMAG00000028842 ENSXMAG00000001893 #22 nrp2b (ENSXMAG00000001898) #23 epb41l5 (ENSXMAG00000001914) ptpn4a (ENSXMAG00000001932) tmem177 (ENSXMAG00000001961) MRAS (ENSXMAG00000001962) pth2ra (ENSXMAG00000001976) ENSXMAG00000021128 ENSXMAG00000002001 tmem163a (ENSXMAG00000007867) acmsd (ENSXMAG00000002018) ccnt2a (ENSXMAG00000002028) ENSXMAG00000024116 ENSXMAG00000024285 ramp1 (ENSXMAG00000002037) ENSXMAG00000022621 Poecilia ANCESTRAL SPECIES 13 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.f ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a Guppy MODERN SPECIES 450 ENSPREG00000015102 BZW1 (ENSPREG00000015136) MYO1B (ENSPREG00000015234) ENSPREG00000015450 ENSPREG00000015479 ENSPREG00000015568 ##34 WNT6 (ENSPREG00000015602) ENSPREG00000015606 wnt10a (ENSPREG00000015633) ENSPREG00000015696 ENSPREG00000015711 cryba2b (ENSPREG00000015716) umps (ENSPREG00000015746) fn1a (ENSPREG00000015770) ENSPREG00000015839 ENSPREG00000015865 #22 nrp2b (ENSPREG00000015894) #23 epb41l5 (ENSPREG00000015938) ptpn4a (ENSPREG00000016007) tmem177 (ENSPREG00000016091) MRAS (ENSPREG00000016102) pth2ra (ENSPREG00000016124) ENSPREG00000016179 ENSPREG00000016209 ENSPREG00000016217 tmem163a (ENSPREG00000016248) acmsd (ENSPREG00000016261) ccnt2a (ENSPREG00000016299) MAP3K19 (ENSPREG00000016430) ramp1 (ENSPREG00000016449) ube2f (ENSPREG00000016461) NAME_6 ANCESTRAL SPECIES 186 ENSGT00940000166603.d ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f Sailfin molly DUPLICATION Sailfin molly DUPLICATION Sailfin molly MODERN SPECIES 17 ENSPLAG00000021605 ##34 WNT6 (ENSPLAG00000021598) wnt10a (ENSPLAG00000021584) ENSPLAG00000021575 cdk5r2b (ENSPLAG00000021570) fev (ENSPLAG00000021560) cryba2b (ENSPLAG00000021553) umps (ENSPLAG00000021538) fn1a (ENSPLAG00000021511) ENSPLAG00000021418 ENSPLAG00000021402 #22 ENSPLAG00000021390 #22 ENSPLAG00000021379 #22 nrp2b (ENSPLAG00000021352) #23 ENSPLAG00000021286 Sailfin molly MODERN SPECIES 17 ENSPLAG00000021605 ##34 WNT6 (ENSPLAG00000021598) wnt10a (ENSPLAG00000021584) ENSPLAG00000021575 cdk5r2b (ENSPLAG00000021570) fev (ENSPLAG00000021560) cryba2b (ENSPLAG00000021553) umps (ENSPLAG00000021538) fn1a (ENSPLAG00000021511) ENSPLAG00000021418 ENSPLAG00000021402 #22 ENSPLAG00000021390 #22 ENSPLAG00000021379 #22 nrp2b (ENSPLAG00000021352) #23 ENSPLAG00000021286 Sailfin molly MODERN SPECIES 17 ENSPLAG00000021605 ##34 WNT6 (ENSPLAG00000021598) wnt10a (ENSPLAG00000021584) ENSPLAG00000021575 cdk5r2b (ENSPLAG00000021570) fev (ENSPLAG00000021560) cryba2b (ENSPLAG00000021553) umps (ENSPLAG00000021538) fn1a (ENSPLAG00000021511) ENSPLAG00000021418 ENSPLAG00000021402 #22 ENSPLAG00000021390 #22 ENSPLAG00000021379 #22 nrp2b (ENSPLAG00000021352) #23 ENSPLAG00000021286 Amazon molly MODERN SPECIES 390 RALB (ENSPFOG00000000798) ENSPFOG00000022068 ENSPFOG00000001549 BZW1 (ENSPFOG00000003280) MYO1B (ENSPFOG00000003543) ENSPFOG00000004283 ENSPFOG00000004430 ##34 WNT6 (ENSPFOG00000004515) wnt10a (ENSPFOG00000004587) cdk5r2b (ENSPFOG00000020110) fev (ENSPFOG00000004658) cryba2b (ENSPFOG00000004669) umps (ENSPFOG00000004713) fn1a (ENSPFOG00000004906) ENSPFOG00000005693 ENSPFOG00000005714 #22 nrp2b (ENSPFOG00000005868) #23 epb41l5 (ENSPFOG00000006337) ptpn4a (ENSPFOG00000006586) NAME_4 ANCESTRAL SPECIES 81 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a.e ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Sheepshead minnow DUPLICATION Sheepshead minnow MODERN SPECIES 500 WNT6 (ENSCVAG00000007287) wnt10a (ENSCVAG00000007307) cdk5r2b (ENSCVAG00000007323) fev (ENSCVAG00000007332) cryba2b (ENSCVAG00000007344) umps (ENSCVAG00000007359) fn1a (ENSCVAG00000011892) ENSCVAG00000011979 ENSCVAG00000011990 #22 ENSCVAG00000012006 #22 ENSCVAG00000012023 #23 Sheepshead minnow MODERN SPECIES 500 WNT6 (ENSCVAG00000007287) wnt10a (ENSCVAG00000007307) cdk5r2b (ENSCVAG00000007323) fev (ENSCVAG00000007332) cryba2b (ENSCVAG00000007344) umps (ENSCVAG00000007359) fn1a (ENSCVAG00000011892) ENSCVAG00000011979 ENSCVAG00000011990 #22 ENSCVAG00000012006 #22 ENSCVAG00000012023 #23 Oryzias ANCESTRAL SPECIES 10 ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 ENSGT00940000159505 ENSGT00940000158589.b.a ENSGT00940000173884 ENSGT00390000011294 ENSGT00390000008142 ENSGT00580000081600.c.b Oryzias_b ANCESTRAL SPECIES 40 ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT01030000234748 ENSGT00940000157018 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00940000162556.A.b ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00390000011821 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00390000012196 ENSGT00940000159505 ENSGT00940000158589.b.a ENSGT00940000173884 ENSGT00390000011294 ENSGT00390000008142 ENSGT00580000081600.c.b Indian medaka MODERN SPECIES 18 TMBIM1 (ENSOMEG00000016060) pnkd (ENSOMEG00000016106) ENSOMEG00000016114 gmppaa (ENSOMEG00000016142) asic4a (ENSOMEG00000016180) CHPF (ENSOMEG00000016218) pdxka (ENSOMEG00000016303) agpat3 (ENSOMEG00000016351) ENSOMEG00000016384 cdk5r2b (ENSOMEG00000016402) fev (ENSOMEG00000016410) cryba2b (ENSOMEG00000016427) umps (ENSOMEG00000016459) fn1a (ENSOMEG00000016544) ENSOMEG00000016575 ENSOMEG00000016682 #22 ENSOMEG00000016701 nrp2b (ENSOMEG00000016727) #23 epb41l5 (ENSOMEG00000016756) ENSOMEG00000016774 ptpn4a (ENSOMEG00000016814) tmem177 (ENSOMEG00000016831) ENSOMEG00000016910 slc37a1 (ENSOMEG00000016960) wdr4 (ENSOMEG00000016985) ENSOMEG00000017009 ENSOMEG00000017019 pknox1.1 (ENSOMEG00000017074) ENSOMEG00000017105 ENSOMEG00000017123 ccdc93 (ENSOMEG00000017201) Javanese ricefish MODERN SPECIES 13 cxcr4a (ENSOJAG00000023451) dars1 (ENSOJAG00000023468) ENSOJAG00000023512 pnkd (ENSOJAG00000023519) ENSOJAG00000023534 asic4a (ENSOJAG00000023538) ENSOJAG00000023541 CHPF (ENSOJAG00000023548) PDXK (ENSOJAG00000023552) agpat3 (ENSOJAG00000023558) ENSOJAG00000023565 ENSOJAG00000023567 fev (ENSOJAG00000023571) cryba2b (ENSOJAG00000023576) ENSOJAG00000023783 ENSOJAG00000023785 #22 ENSOJAG00000023787 nrp2b (ENSOJAG00000023793) #23 ENSOJAG00000023800 epb41l5 (ENSOJAG00000023802) ENSOJAG00000023812 tmem177 (ENSOJAG00000023817) ENSOJAG00000023821 slc37a1 (ENSOJAG00000023831) ENSOJAG00000023837 WDR4 (ENSOJAG00000023838) ENSOJAG00000003518 ENSOJAG00000003543 pknox1.1 (ENSOJAG00000003551) ENSOJAG00000003579 ENSOJAG00000003760 Oryzias_a ANCESTRAL SPECIES 58 ENSGT01030000234618.F ENSGT01050000244890.a.b.a.i.b ENSGT00940000158887 ENSGT00940000157018 ENSGT01030000234748 ENSGT00940000159052 ENSGT01050000244857.B.b ENSGT00390000003874.a.a ENSGT00950000182836.b.b.b.a ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000159245 ENSGT00390000012174 ENSGT00390000008902.kb ENSGT00940000175678 ENSGT00940000159505 ENSGT00940000158589.b.a Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 13 pnkd (ENSORLG00000026276) gmppaa (ENSORLG00000020513) ENSORLG00000025186 asic4a (ENSORLG00000020519) ENSORLG00000029901 CHPF (ENSORLG00000020522) pdxka (ENSORLG00000020526) agpat3 (ENSORLG00000020534) cdk5r2b (ENSORLG00000020537) fev (ENSORLG00000029519) cryba2b (ENSORLG00000020544) umps (ENSORLG00000020552) fn1a (ENSORLG00000020577) ENSORLG00000028926 ENSORLG00000029898 #22 ENSORLG00000023693 #22 ENSORLG00000022281 #22 ENSORLG00000029727 ENSORLG00000026352 ENSORLG00000021788 ENSORLG00000025687 ENSORLG00000022794 ENSORLG00000028758 ENSORLG00000020849 #23 epb41l5 (ENSORLG00000020848) ptpn4a (ENSORLG00000020845) ENSORLG00000027868 tmem177 (ENSORLG00000020842) ENSORLG00000020840 ENSORLG00000025686 slc37a1 (ENSORLG00000020837) Japanese Medaka HdrR MODERN SPECIES 13 TMBIM1 (ENSORLG00000020503) pnkd (ENSORLG00000026276) gmppaa (ENSORLG00000020513) ENSORLG00000025186 asic4a (ENSORLG00000020519) ENSORLG00000029901 CHPF (ENSORLG00000020522) pdxka (ENSORLG00000020526) agpat3 (ENSORLG00000020534) cdk5r2b (ENSORLG00000020537) fev (ENSORLG00000029519) cryba2b (ENSORLG00000020544) umps (ENSORLG00000020552) fn1a (ENSORLG00000020577) ENSORLG00000028926 ENSORLG00000029898 #22 ENSORLG00000023693 #22 ENSORLG00000022281 #22 ENSORLG00000029727 ENSORLG00000026352 ENSORLG00000021788 ENSORLG00000025687 ENSORLG00000022794 ENSORLG00000028758 ENSORLG00000020849 #23 epb41l5 (ENSORLG00000020848) ptpn4a (ENSORLG00000020845) ENSORLG00000027868 tmem177 (ENSORLG00000020842) ENSORLG00000020840 ENSORLG00000025686 Japanese Medaka HdrR MODERN SPECIES 13 gmppaa (ENSORLG00000020513) ENSORLG00000025186 asic4a (ENSORLG00000020519) ENSORLG00000029901 CHPF (ENSORLG00000020522) pdxka (ENSORLG00000020526) agpat3 (ENSORLG00000020534) cdk5r2b (ENSORLG00000020537) fev (ENSORLG00000029519) cryba2b (ENSORLG00000020544) umps (ENSORLG00000020552) fn1a (ENSORLG00000020577) ENSORLG00000028926 ENSORLG00000029898 #22 ENSORLG00000023693 #22 ENSORLG00000022281 #22 ENSORLG00000029727 ENSORLG00000026352 ENSORLG00000021788 ENSORLG00000025687 ENSORLG00000022794 ENSORLG00000028758 ENSORLG00000020849 #23 epb41l5 (ENSORLG00000020848) ptpn4a (ENSORLG00000020845) ENSORLG00000027868 tmem177 (ENSORLG00000020842) ENSORLG00000020840 ENSORLG00000025686 slc37a1 (ENSORLG00000020837) wdr4 (ENSORLG00000020836) Chinese medaka MODERN SPECIES 3978 ENSOSIG00000013352 #22 Ovalentaria_B ANCESTRAL SPECIES 12 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00940000177376 ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 Cichlidae ANCESTRAL SPECIES 14 ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000175555 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Pseudocrenilabrinae ANCESTRAL SPECIES 15 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Pseudocrenilabrinae_A ANCESTRAL SPECIES 14 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT00940000177930 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Haplochromini ANCESTRAL SPECIES 19 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Haplochromini_A ANCESTRAL SPECIES 19 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT01030000235506 ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a Haplochromini_B ANCESTRAL SPECIES 39 ENSGT00940000155984.i.a ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000160059.a.b.b ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856.m ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 ENSGT00940000165586.a ENSGT00940000163794 Eastern happy MODERN SPECIES 7 LRP1B (ENSACLG00000008873) BZW1 (ENSACLG00000008855) ENSACLG00000008844 ENSACLG00000008838 mnx2a (ENSACLG00000008742) ENSACLG00000008622 ENSACLG00000008619 ##34 WNT6 (ENSACLG00000008605) wnt10a (ENSACLG00000008596) cdk5r2b (ENSACLG00000008590) fev (ENSACLG00000008580) cryba2b (ENSACLG00000008557) umps (ENSACLG00000008544) fn1a (ENSACLG00000008496) ENSACLG00000008492 ENSACLG00000007943 #22 nrp2b (ENSACLG00000007905) #23 epb41l5 (ENSACLG00000007894) ptpn4a (ENSACLG00000007832) tmem177 (ENSACLG00000007814) MRAS (ENSACLG00000007804) pth2ra (ENSACLG00000007767) ENSACLG00000007728 tmem163a (ENSACLG00000007268) acmsd (ENSACLG00000007229) ccnt2a (ENSACLG00000007185) MAP3K19 (ENSACLG00000007155) ramp1 (ENSACLG00000007147) ube2f (ENSACLG00000007105) zgc:162780 (ENSACLG00000006922) zgc:162396 (ENSACLG00000006906) Zebra mbuna MODERN SPECIES 1098 ENSMZEG00005002510 nepro (ENSMZEG00005002507) RALB (ENSMZEG00005002487) LRP1B (ENSMZEG00005002258) BZW1 (ENSMZEG00005002198) MYO1B (ENSMZEG00005002144) ENSMZEG00005002024 ENSMZEG00005002006 ##34 WNT6 (ENSMZEG00005001991) wnt10a (ENSMZEG00005001979) cdk5r2b (ENSMZEG00005001970) fev (ENSMZEG00005001960) cryba2b (ENSMZEG00005001946) umps (ENSMZEG00005001923) fn1a (ENSMZEG00005001851) ENSMZEG00005001789 #22 nrp2b (ENSMZEG00005001691) #23 epb41l5 (ENSMZEG00005001677) ptpn4a (ENSMZEG00005001562) tmem177 (ENSMZEG00005001546) MRAS (ENSMZEG00005001534) pth2ra (ENSMZEG00005001481) ENSMZEG00005001468 tmem163a (ENSMZEG00005001445) acmsd (ENSMZEG00005001427) ccnt2a (ENSMZEG00005001394) ENSMZEG00005000887 ramp1 (ENSMZEG00005000875) ube2f (ENSMZEG00005000845) zgc:162780 (ENSMZEG00005000825) zgc:162396 (ENSMZEG00005000798) Burton s mouthbrooder MODERN SPECIES 344 nepro (ENSHBUG00000018983) RALB (ENSHBUG00000018969) LRP1B (ENSHBUG00000018946) BZW1 (ENSHBUG00000018698) MYO1B (ENSHBUG00000018661) ENSHBUG00000018579 ENSHBUG00000001073 ##34 WNT6 (ENSHBUG00000018487) wnt10a (ENSHBUG00000018452) cdk5r2b (ENSHBUG00000018436) fev (ENSHBUG00000018421) cryba2b (ENSHBUG00000018405) umps (ENSHBUG00000018390) fn1a (ENSHBUG00000018377) ENSHBUG00000018248 ENSHBUG00000018232 #22 nrp2b (ENSHBUG00000018197) #23 epb41l5 (ENSHBUG00000018101) ptpn4a (ENSHBUG00000018046) tmem177 (ENSHBUG00000000974) MRAS (ENSHBUG00000017973) pth2ra (ENSHBUG00000017946) tmem163a (ENSHBUG00000017912) acmsd (ENSHBUG00000017896) ccnt2a (ENSHBUG00000017850) ENSHBUG00000017764 ramp1 (ENSHBUG00000017748) ube2f (ENSHBUG00000017716) zgc:162780 (ENSHBUG00000000524) zgc:162396 (ENSHBUG00000017584) ENSHBUG00000017565 Lyretail cichlid MODERN SPECIES 319 RALB (ENSNBRG00000012615) LRP1B (ENSNBRG00000012652) BZW1 (ENSNBRG00000012864) MYO1B (ENSNBRG00000012903) mnx2a (ENSNBRG00000012980) ENSNBRG00000013009 ENSNBRG00000013024 ##34 WNT6 (ENSNBRG00000013039) wnt10a (ENSNBRG00000013057) cdk5r2b (ENSNBRG00000013077) fev (ENSNBRG00000013088) cryba2b (ENSNBRG00000013114) umps (ENSNBRG00000013156) fn1a (ENSNBRG00000013355) ENSNBRG00000014151 ENSNBRG00000014184 #22 nrp2b (ENSNBRG00000014391) #23 epb41l5 (ENSNBRG00000014509) ptpn4a (ENSNBRG00000014547) tmem177 (ENSNBRG00000014602) MRAS (ENSNBRG00000014613) pth2ra (ENSNBRG00000014658) tmem163a (ENSNBRG00000014758) acmsd (ENSNBRG00000014777) ccnt2a (ENSNBRG00000014815) ENSNBRG00000014841 ramp1 (ENSNBRG00000014858) ube2f (ENSNBRG00000014872) zgc:162780 (ENSNBRG00000014908) zgc:162396 (ENSNBRG00000014954) ENSNBRG00000014975 Nile tilapia MODERN SPECIES 7 ENSONIG00000042591 LRP1B (ENSONIG00000004316) BZW1 (ENSONIG00000039517) MYO1B (ENSONIG00000004336) mnx2a (ENSONIG00000036548) ENSONIG00000035161 ENSONIG00000004359 ##34 WNT6 (ENSONIG00000004360) wnt10a (ENSONIG00000032469) cdk5r2b (ENSONIG00000021341) fev (ENSONIG00000037422) cryba2b (ENSONIG00000004364) umps (ENSONIG00000004366) fn1a (ENSONIG00000004372) ENSONIG00000026458 ENSONIG00000004391 #22 ENSONIG00000034750 nrp2b (ENSONIG00000004396) #23 ENSONIG00000038574 epb41l5 (ENSONIG00000004414) ptpn4a (ENSONIG00000004426) tmem177 (ENSONIG00000004446) MRAS (ENSONIG00000004448) pth2ra (ENSONIG00000004451) ENSONIG00000028529 ENSONIG00000032164 tmem163a (ENSONIG00000004454) acmsd (ENSONIG00000004455) ccnt2a (ENSONIG00000004456) MAP3K19 (ENSONIG00000039678) ramp1 (ENSONIG00000030721) Midas cichlid MODERN SPECIES 905 ENSACIG00000012860 fn1a (ENSACIG00000013031) ENSACIG00000014790 #22 ENSACIG00000014969 nrp2b (ENSACIG00000014978) #23 epb41l5 (ENSACIG00000015021) ptpn4a (ENSACIG00000015056) tmem177 (ENSACIG00000015109) MRAS (ENSACIG00000015128) pth2ra (ENSACIG00000015144) ENSACIG00000015193 tmem163a (ENSACIG00000015200) acmsd (ENSACIG00000015216) ccnt2a (ENSACIG00000015242) ENSACIG00000015273 ramp1 (ENSACIG00000015368) ube2f (ENSACIG00000015390) zgc:162780 (ENSACIG00000015409) Pomacentridae ANCESTRAL SPECIES 17 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Bicolor damselfish MODERN SPECIES 1256 ENSSPAG00000003977 ENSSPAG00000003853 #22 Pomacentridae_A ANCESTRAL SPECIES 14 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Spiny chromis MODERN SPECIES 561 ENSAPOG00000018911 ENSAPOG00000018837 ENSAPOG00000018809 #35 ENSAPOG00000018752 #22 Amphiprion ANCESTRAL SPECIES 8 ENSGT00940000157521.a.a ENSGT00390000012561.b.pb.a ENSGT00940000155752 ENSGT00940000164719 ENSGT00430000031142 ENSGT01030000234607.A.a.a.a.d ##34 ENSGT00940000159281 ENSGT00940000160299 ENSGT00390000008812.a.a ENSGT00940000161562 ENSGT00940000160306 ENSGT00390000001856 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.i.a #23 ENSGT00940000156332 ENSGT00940000157211.l ENSGT00390000010354 ENSGT00970000193381.a.b.a.b.a.b.a.b ENSGT00940000156353.u.a ENSGT00940000159094.f ENSGT00940000164905.i.b.b ENSGT00940000153470.a.a.b ENSGT00390000001170.a.a ENSGT00490000043417 ENSGT00940000155759.e.a ENSGT00940000160383 ENSGT00940000159224.a ENSGT00940000154349 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 3 MYO1B (ENSAPEG00000010418) ENSAPEG00000010352 ENSAPEG00000010098 ENSAPEG00000010056 ##34 WNT6 (ENSAPEG00000010032) wnt10a (ENSAPEG00000010000) cdk5r2b (ENSAPEG00000009975) fev (ENSAPEG00000009962) cryba2b (ENSAPEG00000009942) umps (ENSAPEG00000009890) ENSAPEG00000009869 fn1a (ENSAPEG00000009679) ENSAPEG00000009657 ENSAPEG00000009587 #35 ENSAPEG00000009565 #22 ENSAPEG00000009513 #22 nrp2b (ENSAPEG00000009440) #23 epb41l5 (ENSAPEG00000009152) epb41l5 (ENSAPEG00000009079) ptpn4a (ENSAPEG00000008973) tmem177 (ENSAPEG00000008953) ENSAPEG00000008948 MRAS (ENSAPEG00000008940) pth2ra (ENSAPEG00000008903) ENSAPEG00000008803 ENSAPEG00000008554 tmem163a (ENSAPEG00000008508) acmsd (ENSAPEG00000008464) ccnt2a (ENSAPEG00000008355) ENSAPEG00000008294 ramp1 (ENSAPEG00000008272) Orange clownfish MODERN SPECIES 3 BZW1 (ENSAPEG00000010528) MYO1B (ENSAPEG00000010418) ENSAPEG00000010352 ENSAPEG00000010098 ENSAPEG00000010056 ##34 WNT6 (ENSAPEG00000010032) wnt10a (ENSAPEG00000010000) cdk5r2b (ENSAPEG00000009975) fev (ENSAPEG00000009962) cryba2b (ENSAPEG00000009942) umps (ENSAPEG00000009890) ENSAPEG00000009869 fn1a (ENSAPEG00000009679) ENSAPEG00000009657 ENSAPEG00000009587 #35 ENSAPEG00000009565 #22 ENSAPEG00000009513 #22 nrp2b (ENSAPEG00000009440) #23 epb41l5 (ENSAPEG00000009152) epb41l5 (ENSAPEG00000009079) ptpn4a (ENSAPEG00000008973) tmem177 (ENSAPEG00000008953) ENSAPEG00000008948 MRAS (ENSAPEG00000008940) pth2ra (ENSAPEG00000008903) ENSAPEG00000008803 ENSAPEG00000008554 tmem163a (ENSAPEG00000008508) acmsd (ENSAPEG00000008464) ccnt2a (ENSAPEG00000008355) ENSAPEG00000008294 Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1510 ENSAOCG00000018422 ENSAOCG00000018410 #35 ENSAOCG00000018371 #22 ENSAOCG00000018338 #22 nrp2b (ENSAOCG00000018105) #23 Clown anemonefish MODERN SPECIES 1510 ENSAOCG00000018422 ENSAOCG00000018410 #35 ENSAOCG00000018371 #22 ENSAOCG00000018338 #22 nrp2b (ENSAOCG00000018105) #23 Osteoglossiformes ANCESTRAL SPECIES 86 ENSGT00550000075037 ENSGT00940000160059.a.b ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00940000155270.g #23 ENSGT00940000156160 ENSGT00940000157916 ENSGT00940000164110.a.a ENSGT00940000159069 ENSGT00530000063410.b #33 ENSGT00530000063873.B.e #21 ENSGT00940000178309 ENSGT00940000156552.c.a.h #19 ENSGT00390000009001 ENSGT00390000005159.l ENSGT00940000156444.e ENSGT00940000159606 ENSGT00940000158239.a.b.a ENSGT00940000172395 P. kingsleyae MODERN SPECIES 8 ENSPKIG00000001557 TMEM198 (ENSPKIG00000001632) desmb (ENSPKIG00000001657) dnpep (ENSPKIG00000001716) PTPRN (ENSPKIG00000001805) dnajb2 (ENSPKIG00000001907) ENSPKIG00000001956 ENSPKIG00000001966 ENSPKIG00000001982 TUBA4A (ENSPKIG00000002008) stk16 (ENSPKIG00000002035) mnx2b (ENSPKIG00000002066) atic (ENSPKIG00000002172) fn1b (ENSPKIG00000002247) ENSPKIG00000002315 ENSPKIG00000002362 #22 NRP2 (ENSPKIG00000002549) #23 ENSPKIG00000002675 abcb6a (ENSPKIG00000002713) ENSPKIG00000002839 retreg2 (ENSPKIG00000002909) ENSPKIG00000002927 FER1L6 (ENSPKIG00000002971) mdh1b (ENSPKIG00000003031) #33 ENSPKIG00000003058 #21 ENSPKIG00000003078 ENSPKIG00000003089 ENSPKIG00000003105 ENSPKIG00000003117 ABI2 (ENSPKIG00000003196) #18 TMEM237 (ENSPKIG00000003302) Asian bonytongue MODERN SPECIES 3 ENSSFOG00015012864 TMEM198 (ENSSFOG00015012958) desmb (ENSSFOG00015012984) dnpep (ENSSFOG00015013051) PTPRN (ENSSFOG00015013117) dnajb2 (ENSSFOG00015013167) ENSSFOG00015032957 ENSSFOG00015026487 ENSSFOG00015031461 ENSSFOG00015031009 mnx2b (ENSSFOG00015015616) stk16 (ENSSFOG00015015622) tuba8l2 (ENSSFOG00015025297) atic (ENSSFOG00015015699) fn1b (ENSSFOG00015015910) ENSSFOG00015016998 #22 NRP2 (ENSSFOG00015017053) #23 abcb6a (ENSSFOG00015017166) retreg2 (ENSSFOG00015017310) FER1L6 (ENSSFOG00015017331) mdh1b (ENSSFOG00015017397) #33 ENSSFOG00015025889 CTLA4 (ENSSFOG00015017416) #21 ENSSFOG00015017428 RAPH1 (ENSSFOG00015017453) #19 ENSSFOG00015026680 ABI2 (ENSSFOG00015017511) #18 TMEM237 (ENSSFOG00015017568) MPP4 (ENSSFOG00015017618) cdk15 (ENSSFOG00015017727) fzd7a (ENSSFOG00015017773) Osteoglossocephalai ANCESTRAL SPECIES 178 ENSGT00390000004553 ENSGT00940000155126.s.a ENSGT00940000168433 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.a #35 ENSGT00950000183214.a.b.a.b.f.a #22 ENSGT00950000183214.a.b.a.b.f.b #22 ENSGT00940000155270 #23 ENSGT00940000156160 ENSGT00390000000862 ENSGT00940000157916 ENSGT00950000183019.f.b.b.c ENSGT00530000063873.B #21 ENSGT00940000178309 ENSGT00940000156552.c.a #19 ENSGT00940000156089 #18 ENSGT00500000044939 #16 ENSGT00390000005159 ENSGT00940000156444 ENSGT00940000155861.C.e ENSGT00940000159606 ENSGT00940000158239.a.b Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.a #22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.a #22 Otophysi ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.a #22 Cyprinoidei ANCESTRAL SPECIES 34 ENSGT01030000234570.d.a.p ENSGT00530000063186.b.b ENSGT00940000154695.d.b.b.k.b ENSGT00940000154695.d.b.b.l ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b #36 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.a.a #22 ENSGT00940000155270.i.b.a #23 ENSGT00940000161508.b #35 ENSGT00940000155126.s.a ENSGT00390000004553 ENSGT00940000160059.a.b.a ENSGT00550000075037 ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b ENSGT00950000183055.a.a ENSGT00940000159810 ENSGT00940000160718 ENSGT00940000158453.a ENSGT01050000244955.a.a ENSGT01050000244897.a.b.b.a.b ENSGT00390000010543 Zebrafish DUPLICATION Zebrafish MODERN SPECIES ERBB4 (ENSDARG00000090408) erbb4a (ENSDARG00000063207) ube2f (ENSDARG00000025754) si:ch211-93g23.2 (ENSDARG00000070558) klf7a (ENSDARG00000073857) #36 ENSDARG00000063253 ENSDARG00000113848 gtf3c3 (ENSDARG00000043247) ENSDARG00000074031 #34 mdh1b (ENSDARG00000018008) #33 retreg2 (ENSDARG00000063270) ENSDARG00000017537 cnppd1 (ENSDARG00000027078) abcb6a (ENSDARG00000063297) ENSDARG00000113935 #22 pard3ba (ENSDARG00000092671) #22 nrp2a (ENSDARG00000096546) #23 cpo (ENSDARG00000077688) #35 fn1b (ENSDARG00000006526) mnx2b (ENSDARG00000030350) atic (ENSDARG00000016706) stk16 (ENSDARG00000037777) tuba8l2 (ENSDARG00000031164) ndfip2 (ENSDARG00000033928) spry2 (ENSDARG00000078308) slitrk6 (ENSDARG00000098769) gpc5a (ENSDARG00000103647) gpc6a (ENSDARG00000103156) ggact.1 (ENSDARG00000070581) ggact.2 (ENSDARG00000038248) ggact.3 (ENSDARG00000070579) Zebrafish MODERN SPECIES lancl1 (ENSDARG00000013741) ERBB4 (ENSDARG00000090408) erbb4a (ENSDARG00000063207) ube2f (ENSDARG00000025754) si:ch211-93g23.2 (ENSDARG00000070558) klf7a (ENSDARG00000073857) #36 ENSDARG00000063253 ENSDARG00000113848 gtf3c3 (ENSDARG00000043247) ENSDARG00000074031 #34 mdh1b (ENSDARG00000018008) #33 retreg2 (ENSDARG00000063270) ENSDARG00000017537 cnppd1 (ENSDARG00000027078) abcb6a (ENSDARG00000063297) ENSDARG00000113935 #22 pard3ba (ENSDARG00000092671) #22 nrp2a (ENSDARG00000096546) #23 cpo (ENSDARG00000077688) #35 fn1b (ENSDARG00000006526) mnx2b (ENSDARG00000030350) atic (ENSDARG00000016706) stk16 (ENSDARG00000037777) tuba8l2 (ENSDARG00000031164) ndfip2 (ENSDARG00000033928) spry2 (ENSDARG00000078308) slitrk6 (ENSDARG00000098769) gpc5a (ENSDARG00000103647) gpc6a (ENSDARG00000103156) ggact.1 (ENSDARG00000070581) ggact.2 (ENSDARG00000038248) Cyprininae ANCESTRAL SPECIES 117 ENSGT01030000234570.d.a.p.e ENSGT00530000063186.b.b.k ENSGT00940000154695.d.b.b.k.a.a.b ENSGT00940000154695.d.b.b.l.a ENSGT00940000154349.b ENSGT00940000165586.b ENSGT00940000155235.k.b.a #36 ENSGT00940000155466.e.a.u ENSGT00390000016929 ENSGT01030000234607.A.b.a #34 ENSGT00530000063410.b #33 ENSGT00940000164110.c ENSGT00950000183019.f.b.b.d.a ENSGT00390000000862.c ENSGT00940000156160.b.a.g ENSGT00950000183214.a.b.a.b.f.b.a.a #22 ENSGT00940000155270.i.b.a.b #23 ENSGT00940000161508.b.e #35 ENSGT00940000155126.s.a.b ENSGT00390000004553.g ENSGT00940000160059.a.b.a.a ENSGT00550000075037.c ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b.q ENSGT00950000183055.a.a.e ENSGT00940000159810.c.b ENSGT00940000160718.c ENSGT00940000158453.a.e ENSGT01050000244955.a.a.i ENSGT01050000244897.a.b.b.a.b.a Cyprininae_a ANCESTRAL SPECIES 158 ENSGT01030000234570.d.a.p.e ENSGT00530000063186.b.b.k ENSGT00940000154695.d.b.b.k.a.a.b ENSGT00940000154695.d.b.b.l.a ENSGT00940000154349.b ENSGT00940000165586.b ENSGT00940000155235.k.b.a #36 ENSGT00940000155466.e.a.u ENSGT00390000016929 ENSGT01030000234607.A.b.a #34 ENSGT00530000063410.b.g #33 ENSGT00940000164110.c ENSGT00950000183019.f.b.b.d.a ENSGT00390000000862.c ENSGT00940000156160.b.a.g ENSGT00950000183214.a.b.a.b.f.b.a.a #22 ENSGT00940000155270.i.b.a.b #23 ENSGT00940000161508.b.e #35 ENSGT00940000155126.s.a.b ENSGT00390000004553.g ENSGT00940000160059.a.b.a.a ENSGT00550000075037.c ENSGT00950000183165.a.a.b.o.b ENSGT00390000012721.b.q ENSGT00950000183055.a.a.e ENSGT00940000160718.c ENSGT00940000158453.a.e ENSGT01050000244955.a.a.i ENSGT01050000244897.a.b.b.a.b.a ENSGT00390000010543.k.a ENSGT00940000155318.b.b.a Common carp reference MODERN SPECIES 27 lancl1 (ENSCCRG00000029873) ERBB4 (ENSCCRG00000029972) ENSCCRG00000071385 erbb4a (ENSCCRG00000015128) si:ch211-93g23.2 (ENSCCRG00000004282) klf7a (ENSCCRG00000043715) #36 ENSCCRG00000023747 gtf3c3 (ENSCCRG00000023143) ENSCCRG00000023104 #34 mdh1b (ENSCCRG00000023101) #33 retreg2 (ENSCCRG00000063718) ENSCCRG00000023065 cnppd1 (ENSCCRG00000082729) abcb6a (ENSCCRG00000022872) ENSCCRG00000018765 pard3ba (ENSCCRG00000057087) #22 ENSCCRG00000073316 nrp2a (ENSCCRG00000005339) #23 cpo (ENSCCRG00000005401) #35 fn1b (ENSCCRG00000017095) atic (ENSCCRG00000059023) mnx2b (ENSCCRG00000007561) stk16 (ENSCCRG00000007566) tuba8l2 (ENSCCRG00000007571) ndfip2 (ENSCCRG00000078945) spry2 (ENSCCRG00000072447) slitrk6 (ENSCCRG00000078661) SLITRK5 (ENSCCRG00000077853) gpc5a (ENSCCRG00000010392) gpc6a (ENSCCRG00000075847) ENSCCRG00000039024 Golden-line barbel MODERN SPECIES 562 ENSSGRG00000046382 erbb4a (ENSSGRG00000046383) ube2f (ENSSGRG00000046384) si:ch211-93g23.2 (ENSSGRG00000046385) klf7a (ENSSGRG00000046387) #36 HECW2 (ENSSGRG00000046418) gtf3c3 (ENSSGRG00000046479) ENSSGRG00000046612 #34 mdh1b (ENSSGRG00000046613) #33 retreg2 (ENSSGRG00000046614) ENSSGRG00000046615 cnppd1 (ENSSGRG00000046616) abcb6a (ENSSGRG00000046629) ENSSGRG00000046821 pard3ba (ENSSGRG00000046823) #22 nrp2a (ENSSGRG00000046827) #23 cpo (ENSSGRG00000046842) #35 fn1b (ENSSGRG00000046843) atic (ENSSGRG00000046878) mnx2b (ENSSGRG00000048042) tuba8l2 (ENSSGRG00000048043) ndfip2 (ENSSGRG00000048046) spry2 (ENSSGRG00000048048) Goldfish MODERN SPECIES 18 dcbld1 (ENSCARG00000070174) vgll2a (ENSCARG00000070173) rfx6 (ENSCARG00000070161) tdrd15 (ENSCARG00000070155) ube2f (ENSCARG00000070154) si:ch211-93g23.2 (ENSCARG00000070152) klf7a (ENSCARG00000070151) #36 HECW2 (ENSCARG00000070129) gtf3c3 (ENSCARG00000070114) ENSCARG00000070098 #34 mdh1b (ENSCARG00000070090) #33 retreg2 (ENSCARG00000070085) ENSCARG00000070078 cnppd1 (ENSCARG00000070074) abcb6a (ENSCARG00000070059) pard3ba (ENSCARG00000070049) #22 gpc6a (ENSCARG00000070041) gpc5a (ENSCARG00000070030) SLITRK5 (ENSCARG00000070023) slitrk6 (ENSCARG00000070021) SLITRK1 (ENSCARG00000070020) ENSCARG00000070018 atp1a1a.2 (ENSCARG00000069999) atp1a1a.3 (ENSCARG00000069992) ENSCARG00000069985 ENSCARG00000069988 ENSCARG00000069981 ENSCARG00000069976 ENSCARG00000069966 atp1a1a.1 (ENSCARG00000069890) atp1a1a.4 (ENSCARG00000069866) Clupeocephala ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Salmoninae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Huchen MODERN SPECIES 11707 ENSHHUG00000018646 #22 Otomorpha ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Otophysi ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.a.b #22 Cyprinoidei ANCESTRAL SPECIES 429 ENSGT00950000183214.a.b.a.b.f.b.a.b #22 ENSGT00940000155270.i.b.b #23 Cyprininae ANCESTRAL SPECIES 1379 ENSGT00950000183214.a.b.a.b.f.b.a.b #22 ENSGT00940000155270.i.b.b #23 Cyprininae_a ANCESTRAL SPECIES 125 ENSGT00940000154695.d.b.b.l.b ENSGT00940000154349.a ENSGT00940000155235.k.b.b #36 ENSGT00940000155466.e.a.v ENSGT01030000234607.A.b.b #34 ENSGT00530000063410.b.h #33 ENSGT00940000164110.d ENSGT00950000183019.f.b.b.d.b ENSGT00390000000862.d ENSGT00940000156160.b.a.h ENSGT00950000183214.a.b.a.b.f.b.a.b #22 ENSGT00940000155270.i.b.a.a #23 ENSGT00940000161508.b.f #35 ENSGT00940000155126.s.a.a ENSGT00390000004553.h ENSGT00940000160059.a.b.a.b ENSGT00550000075037.d ENSGT00950000183165.a.a.b.o.a ENSGT00390000012721.b.r ENSGT00950000183055.a.a.f ENSGT00940000159810.d ENSGT00940000160718.d ENSGT00940000158453.a.f ENSGT01050000244955.a.a.j ENSGT01050000244897.a.b.b.a.b.b ENSGT00390000010543.l Common carp reference MODERN SPECIES 22 ENSCCRG00000060450 mylz3 (ENSCCRG00000029856) lancl1 (ENSCCRG00000061307) ERBB4 (ENSCCRG00000062241) ENSCCRG00000074113 ENSCCRG00000078711 erbb4a (ENSCCRG00000025215) ube2f (ENSCCRG00000054390) klf7a (ENSCCRG00000060049) #36 ENSCCRG00000030814 ENSCCRG00000003929 #34 retreg2 (ENSCCRG00000032443) ENSCCRG00000023072 cnppd1 (ENSCCRG00000079841) abcb6a (ENSCCRG00000078899) ENSCCRG00000024157 #22 nrp2a (ENSCCRG00000005417) #23 cpo (ENSCCRG00000067406) #35 fn1b (ENSCCRG00000003115) atic (ENSCCRG00000007553) mnx2b (ENSCCRG00000078365) stk16 (ENSCCRG00000013994) ENSCCRG00000014401 ndfip2 (ENSCCRG00000013997) spry2 (ENSCCRG00000067691) ENSCCRG00000059962 ENSCCRG00000058343 ENSCCRG00000077467 SLITRK1 (ENSCCRG00000081534) slitrk6 (ENSCCRG00000072693) SLITRK5 (ENSCCRG00000069880) Golden-line barbel MODERN SPECIES 371 ENSSGRG00000015089 ENSSGRG00000015080 #34 mdh1b (ENSSGRG00000015076) #33 retreg2 (ENSSGRG00000015075) ENSSGRG00000015048 cnppd1 (ENSSGRG00000015017) abcb6a (ENSSGRG00000014835) ENSSGRG00000014813 ENSSGRG00000014812 ENSSGRG00000014810 #22 ENSSGRG00000014809 #23 ENSSGRG00000014808 #23 nrp2a (ENSSGRG00000014790) #23 cpo (ENSSGRG00000014789) #35 fn1b (ENSSGRG00000006839) atic (ENSSGRG00000002514) ENSSGRG00000002437 stk16 (ENSSGRG00000002423) ENSSGRG00000002311 ndfip2 (ENSSGRG00000002306) spry2 (ENSSGRG00000002305) Goldfish MODERN SPECIES ENSCARG00000028244 ndufab1a (ENSCARG00000028263) plk1 (ENSCARG00000028289) ENSCARG00000028368 chtf18 (ENSCARG00000028754) gng13a (ENSCARG00000028819) zgc:136472 (ENSCARG00000028831) ubn1 (ENSCARG00000028869) uncx4.1 (ENSCARG00000028879) micall2b (ENSCARG00000028910) ENSCARG00000029016 ENSCARG00000029831 ELFN1 (ENSCARG00000029841) ENSCARG00000029848 ENSCARG00000029859 ENSCARG00000029863 #22 nrp2a (ENSCARG00000029896) #23 cpo (ENSCARG00000030462) #35 fn1b (ENSCARG00000031169) ENSCARG00000059532 mnx2b (ENSCARG00000059558) stk16 (ENSCARG00000059585) ENSCARG00000059596 ndfip2 (ENSCARG00000059625) ENSCARG00000059641 ENSCARG00000059651 spry2 (ENSCARG00000059657) ENSCARG00000059669 ENSCARG00000059678 ENSCARG00000059691 ENSCARG00000059721 Clupeocephala ANCESTRAL SPECIES 323 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118 ENSGT00940000159160 ENSGT00730000111163 Euteleosteomorpha ANCESTRAL SPECIES 187 ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 Acanthomorphata ANCESTRAL SPECIES 87 ENSGT00960000190231 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Cod DUPLICATION Cod MODERN SPECIES 17 MSL3 (ENSGMOG00000015932) ENSGMOG00000007185 ENSGMOG00000010282 ENSGMOG00000027811 ENSGMOG00000016450 ENSGMOG00000028246 ENSGMOG00000003052 ADAMTS5 (ENSGMOG00000003076) ADAMTS1 (ENSGMOG00000003119) cyyr1 (ENSGMOG00000003148) APP (ENSGMOG00000003156) atp5pf (ENSGMOG00000003197) jam2a (ENSGMOG00000036713) ENSGMOG00000033124 ENSGMOG00000000567 ENSGMOG00000005580 #22 abcb6a (ENSGMOG00000004283) cnppd1 (ENSGMOG00000004320) ENSGMOG00000004338 ENSGMOG00000034071 retreg2 (ENSGMOG00000004356) mdh1b (ENSGMOG00000031708) #33 ENSGMOG00000026580 ENSGMOG00000034282 ENSGMOG00000000724 cpb2 (ENSGMOG00000000707) alg11 (ENSGMOG00000000693) spp2 (ENSGMOG00000000657) raph1b (ENSGMOG00000024998) #19 ENSGMOG00000001433 ENSGMOG00000031689 Cod MODERN SPECIES 12 zgc:136439 (ENSGMOG00000002342) ENSGMOG00000024326 ENSGMOG00000026996 SLC40A1 (ENSGMOG00000002288) ENSGMOG00000031663 ENSGMOG00000033745 hao2 (ENSGMOG00000002592) wars2 (ENSGMOG00000032164) tbx15 (ENSGMOG00000025205) ENSGMOG00000032281 wdr3 (ENSGMOG00000002962) gdap2 (ENSGMOG00000003020) tent5c (ENSGMOG00000007342) ENSGMOG00000023329 ENSGMOG00000007873 #35 ENSGMOG00000023342 #22 ENSGMOG00000012609 #23 epb41l5 (ENSGMOG00000012613) ptpn4a (ENSGMOG00000012617) tmem177 (ENSGMOG00000012622) ENSGMOG00000012623 ENSGMOG00000006442 ENSGMOG00000030948 hdac4 (ENSGMOG00000005976) twist2 (ENSGMOG00000005968) ENSGMOG00000034506 traf3ip1 (ENSGMOG00000005943) agr1 (ENSGMOG00000034712) ENSGMOG00000005924 ENSGMOG00000024607 ENSGMOG00000031000 Euacanthomorphacea ANCESTRAL SPECIES 36 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Percomorphaceae ANCESTRAL SPECIES 22 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Tiger tail seahorse MODERN SPECIES 275 GPR34 (ENSHCOG00000011519) cenpl (ENSHCOG00000011511) FUNDC1 (ENSHCOG00000011500) kdm6al (ENSHCOG00000011482) ENSHCOG00000011442 ADAMTS5 (ENSHCOG00000011429) ADAMTS1 (ENSHCOG00000011424) cyyr1 (ENSHCOG00000011420) APP (ENSHCOG00000011389) atp5pf (ENSHCOG00000011300) jam2a (ENSHCOG00000011292) mrpl39 (ENSHCOG00000011280) rap2ab (ENSHCOG00000011271) mbnl2 (ENSHCOG00000011265) ENSHCOG00000011256 ENSHCOG00000011242 #22 nrp2a (ENSHCOG00000011133) #23 abcb6a (ENSHCOG00000010225) cnppd1 (ENSHCOG00000010135) ENSHCOG00000010096 retreg2 (ENSHCOG00000009888) mdh1b (ENSHCOG00000009881) #33 ENSHCOG00000009863 #34 ENSHCOG00000009853 ENSHCOG00000009834 raph1b (ENSHCOG00000009809) #19 alg11 (ENSHCOG00000009773) cpb2 (ENSHCOG00000000303) ENSHCOG00000009742 rpl31 (ENSHCOG00000009739) chst10 (ENSHCOG00000009726) Percomorphaceae_B ANCESTRAL SPECIES 22 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Percomorphaceae_C ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 Eupercaria ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 Tetraodontidae ANCESTRAL SPECIES 22 ENSGT00940000155600.a.a.h ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00530000063873.A #20 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Fugu MODERN SPECIES 20 FUNDC1 (ENSTRUG00000011532) kdm6al (ENSTRUG00000011300) ENSTRUG00000011043 ADAMTS5 (ENSTRUG00000010983) ADAMTS1 (ENSTRUG00000010756) cyyr1 (ENSTRUG00000010751) APP (ENSTRUG00000010470) atp5pf (ENSTRUG00000027297) jam2a (ENSTRUG00000010367) mrpl39 (ENSTRUG00000010315) rap2ab (ENSTRUG00000021439) mbnl2 (ENSTRUG00000010220) ENSTRUG00000010079 ENSTRUG00000029602 ENSTRUG00000033281 ENSTRUG00000009883 #22 nrp2a (ENSTRUG00000009236) #23 abcb6a (ENSTRUG00000009019) cnppd1 (ENSTRUG00000008996) ENSTRUG00000008850 retreg2 (ENSTRUG00000020062) ENSTRUG00000027970 ENSTRUG00000021914 mdh1b (ENSTRUG00000008621) #33 ENSTRUG00000019725 #34 cd28 (ENSTRUG00000008513) #20 raph1b (ENSTRUG00000008306) #19 alg11 (ENSTRUG00000008200) cpb2 (ENSTRUG00000007671) ENSTRUG00000030462 rpl31 (ENSTRUG00000007359) Tetraodon MODERN SPECIES 18 il1rapl1b (ENSTNIG00000014546) caskb (ENSTNIG00000014545) cenpl (ENSTNIG00000014543) FUNDC1 (ENSTNIG00000014542) ENSTNIG00000000999 kdm6al (ENSTNIG00000014541) ENSTNIG00000014540 ADAMTS5 (ENSTNIG00000014539) ADAMTS1 (ENSTNIG00000014538) APP (ENSTNIG00000014537) atp5pf (ENSTNIG00000014536) jam2a (ENSTNIG00000000490) mrpl39 (ENSTNIG00000014535) rap2ab (ENSTNIG00000014534) mbnl2 (ENSTNIG00000014533) ENSTNIG00000014532 #22 nrp2a (ENSTNIG00000014531) #23 abcb6a (ENSTNIG00000014530) ENSTNIG00000002465 ENSTNIG00000014529 retreg2 (ENSTNIG00000014528) mdh1b (ENSTNIG00000000378) #33 ENSTNIG00000014527 #34 raph1b (ENSTNIG00000014526) #19 alg11 (ENSTNIG00000014525) cpb2 (ENSTNIG00000014524) zc3h13 (ENSTNIG00000014523) rpl31 (ENSTNIG00000014522) chst10 (ENSTNIG00000014521) ENSTNIG00000014520 ENSTNIG00000014519 Eupecaria_A ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 Ballan wrasse MODERN SPECIES 1279 ENSLBEG00000022042 #22 Eupecaria_B ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 Perciformes ANCESTRAL SPECIES 24 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Cottioidei ANCESTRAL SPECIES 24 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Lumpfish MODERN SPECIES 11 GPR34 (ENSCLMG00005004536) cenpl (ENSCLMG00005004545) FUNDC1 (ENSCLMG00005004563) kdm6al (ENSCLMG00005004832) ADAMTS5 (ENSCLMG00005007241) ADAMTS1 (ENSCLMG00005007244) cyyr1 (ENSCLMG00005007245) APP (ENSCLMG00005007306) atp5pf (ENSCLMG00005014632) jam2a (ENSCLMG00005014633) mrpl39 (ENSCLMG00005014634) rap2ab (ENSCLMG00005014674) mbnl2 (ENSCLMG00005014677) ENSCLMG00005014689 ENSCLMG00005014691 ENSCLMG00005014693 #22 nrp2a (ENSCLMG00005014713) #23 abcb6a (ENSCLMG00005015690) ENSCLMG00005017216 ENSCLMG00005017219 ENSCLMG00005017235 arhgef7b (ENSCLMG00005017440) SOX1 (ENSCLMG00005019072) ATP11A (ENSCLMG00005000052) tubgcp3 (ENSCLMG00005000524) ENSCLMG00005000536 rcbtb1 (ENSCLMG00005000540) cdadc1 (ENSCLMG00005000549) cab39l (ENSCLMG00005000599) MCF2L (ENSCLMG00005000628) ENSCLMG00005000777 Stickleback MODERN SPECIES cenpl (ENSGACG00000015062) FUNDC1 (ENSGACG00000015063) kdm6al (ENSGACG00000015068) ENSGACG00000015070 ADAMTS5 (ENSGACG00000015075) ADAMTS1 (ENSGACG00000015076) cyyr1 (ENSGACG00000015079) APP (ENSGACG00000015081) atp5pf (ENSGACG00000015085) jam2a (ENSGACG00000015087) mrpl39 (ENSGACG00000015089) rap2ab (ENSGACG00000015103) mbnl2 (ENSGACG00000015105) ENSGACG00000015107 ENSGACG00000015115 ENSGACG00000015116 #22 ENSGACG00000015120 nrp2a (ENSGACG00000015122) #23 abcb6a (ENSGACG00000015126) cnppd1 (ENSGACG00000015132) ENSGACG00000015135 retreg2 (ENSGACG00000015143) mdh1b (ENSGACG00000015146) #33 ENSGACG00000015149 ENSGACG00000015151 raph1b (ENSGACG00000015152) #19 spp2 (ENSGACG00000015156) alg11 (ENSGACG00000015159) cpb2 (ENSGACG00000015162) zc3h13 (ENSGACG00000015166) rpl31 (ENSGACG00000015169) Perciformes_a ANCESTRAL SPECIES 25 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00950000183030 ENSGT00940000157128 Channel bull blenny MODERN SPECIES 11 CASK (ENSCGOG00000024553) cenpl (ENSCGOG00000024535) FUNDC1 (ENSCGOG00000024533) kdm6al (ENSCGOG00000024312) ENSCGOG00000024155 ADAMTS5 (ENSCGOG00000024136) ADAMTS1 (ENSCGOG00000024135) cyyr1 (ENSCGOG00000024134) APP (ENSCGOG00000023662) atp5pf (ENSCGOG00000023612) jam2a (ENSCGOG00000023606) mrpl39 (ENSCGOG00000023584) rap2ab (ENSCGOG00000023575) mbnl2 (ENSCGOG00000023566) ENSCGOG00000023559 ENSCGOG00000023549 #22 nrp2a (ENSCGOG00000023135) #23 abcb6a (ENSCGOG00000022961) cnppd1 (ENSCGOG00000022956) ENSCGOG00000022953 retreg2 (ENSCGOG00000022949) mdh1b (ENSCGOG00000022940) #33 ENSCGOG00000022938 #34 ENSCGOG00000022937 raph1b (ENSCGOG00000022764) #19 spp2 (ENSCGOG00000022749) alg11 (ENSCGOG00000022747) cpb2 (ENSCGOG00000022743) rpl31 (ENSCGOG00000022725) chst10 (ENSCGOG00000022724) ENSCGOG00000017296 Pike perch MODERN SPECIES 9 FUNDC1 (ENSSLUG00000025394) kdm6al (ENSSLUG00000016683) ENSSLUG00000015186 ADAMTS5 (ENSSLUG00000014994) ADAMTS1 (ENSSLUG00000014970) cyyr1 (ENSSLUG00000014965) APP (ENSSLUG00000008660) atp5pf (ENSSLUG00000008261) ENSSLUG00000008250 jam2a (ENSSLUG00000008239) mrpl39 (ENSSLUG00000008097) rap2ab (ENSSLUG00000008078) mbnl2 (ENSSLUG00000008025) ENSSLUG00000007988 ENSSLUG00000007984 pard3ba (ENSSLUG00000007966) #22 nrp2a (ENSSLUG00000005645) #23 abcb6a (ENSSLUG00000005199) cnppd1 (ENSSLUG00000005142) ENSSLUG00000005088 retreg2 (ENSSLUG00000023431) mdh1b (ENSSLUG00000023427) #33 ENSSLUG00000023420 #34 ENSSLUG00000023416 ENSSLUG00000023414 raph1b (ENSSLUG00000023307) #19 spp2 (ENSSLUG00000023287) alg11 (ENSSLUG00000023283) cpb2 (ENSSLUG00000023268) ENSSLUG00000023259 rpl31 (ENSSLUG00000023256) Eupecaria_C ANCESTRAL SPECIES 27 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Gilthead seabream MODERN SPECIES 16 caskb (ENSSAUG00010026855) cenpl (ENSSAUG00010026846) FUNDC1 (ENSSAUG00010026840) kdm6al (ENSSAUG00010020185) ENSSAUG00010019785 ADAMTS5 (ENSSAUG00010019771) ENSSAUG00010019769 ADAMTS1 (ENSSAUG00010019766) APP (ENSSAUG00010017291) ATP5J (ENSSAUG00010017260) jam2a (ENSSAUG00010017256) mrpl39 (ENSSAUG00010017242) rap2ab (ENSSAUG00010017238) mbnl2 (ENSSAUG00010017204) ENSSAUG00010017201 ENSSAUG00010017193 #22 nrp2a (ENSSAUG00010016327) #23 abcb6a (ENSSAUG00010016287) cnppd1 (ENSSAUG00010016285) ENSSAUG00010015871 retreg2 (ENSSAUG00010015858) mdh1b (ENSSAUG00010015856) #33 ENSSAUG00010015853 #34 ENSSAUG00010015850 raph1b (ENSSAUG00010015668) #19 spp2 (ENSSAUG00010015659) alg11 (ENSSAUG00010015656) cpb2 (ENSSAUG00010015649) zc3h13 (ENSSAUG00010015648) rpl31 (ENSSAUG00010015646) MAP4K4 (ENSSAUG00010013987) Eupercaria_incertae_sedis ANCESTRAL SPECIES 31 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 European seabass MODERN SPECIES 15 ENSDLAG00005024076 ENSDLAG00005027621 ENSDLAG00005029710 ENSDLAG00005024220 ENSDLAG00005005746 ENSDLAG00005030864 ENSDLAG00005007858 ADAMTS5 (ENSDLAG00005031926) ENSDLAG00005008994 APP (ENSDLAG00005009169) jam2a (ENSDLAG00005015261) mrpl39 (ENSDLAG00005015269) ENSDLAG00005027520 ENSDLAG00005015405 ENSDLAG00005015455 ENSDLAG00005015507 #22 ENSDLAG00005034257 ENSDLAG00005015590 #23 ENSDLAG00005017020 abcb6a (ENSDLAG00005017043) cnppd1 (ENSDLAG00005017316) ENSDLAG00005017447 retreg2 (ENSDLAG00005026804) mdh1b (ENSDLAG00005017625) #33 ENSDLAG00005017672 raph1b (ENSDLAG00005017704) #19 spp2 (ENSDLAG00005026585) alg11 (ENSDLAG00005018603) cpb2 (ENSDLAG00005018614) zc3h13 (ENSDLAG00005018626) ENSDLAG00005018637 Large yellow croaker MODERN SPECIES 486 GPR34 (ENSLCRG00005007109) cenpl (ENSLCRG00005007110) FUNDC1 (ENSLCRG00005007111) kdm6al (ENSLCRG00005007211) ENSLCRG00005021804 ADAMTS5 (ENSLCRG00005021805) ADAMTS1 (ENSLCRG00005021806) cyyr1 (ENSLCRG00005021808) APP (ENSLCRG00005021835) atp5pf (ENSLCRG00005023036) jam2a (ENSLCRG00005023038) mrpl39 (ENSLCRG00005023039) rap2ab (ENSLCRG00005023040) mbnl2 (ENSLCRG00005023043) ENSLCRG00005023044 pard3ba (ENSLCRG00005023046) #22 ENSLCRG00005010605 nrp2a (ENSLCRG00005010619) #23 abcb6a (ENSLCRG00005012185) cnppd1 (ENSLCRG00005012371) ENSLCRG00005012462 retreg2 (ENSLCRG00005013249) mdh1b (ENSLCRG00005013252) #33 ENSLCRG00005013256 #34 ENSLCRG00005013258 raph1b (ENSLCRG00005013261) #19 spp2 (ENSLCRG00005013265) alg11 (ENSLCRG00005013267) cpb2 (ENSLCRG00005013268) zc3h13 (ENSLCRG00005013271) rpl31 (ENSLCRG00005013274) Percomorphaceae_D ANCESTRAL SPECIES 23 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 Anabantaria ANCESTRAL SPECIES 23 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Zig-zag eel MODERN SPECIES 11 ENSMAMG00000022070 ENSMAMG00000022082 ENSMAMG00000022092 ENSMAMG00000028432 ENSMAMG00000022115 ENSMAMG00000022119 ENSMAMG00000022130 cyyr1 (ENSMAMG00000022132) APP (ENSMAMG00000022137) atp5pf (ENSMAMG00000022160) jam2a (ENSMAMG00000022163) mrpl39 (ENSMAMG00000022169) ENSMAMG00000022170 ENSMAMG00000022173 ENSMAMG00000022183 ENSMAMG00000022187 #22 ENSMAMG00000022194 #23 abcb6a (ENSMAMG00000022210) cnppd1 (ENSMAMG00000022216) ENSMAMG00000022222 retreg2 (ENSMAMG00000022232) mdh1b (ENSMAMG00000022235) #33 ENSMAMG00000022239 #34 ENSMAMG00000022240 raph1b (ENSMAMG00000022248) #19 spp2 (ENSMAMG00000022266) alg11 (ENSMAMG00000022268) cpb2 (ENSMAMG00000022271) zc3h13 (ENSMAMG00000022274) ENSMAMG00000022284 mrps9 (ENSMAMG00000022287) Anabantoidei ANCESTRAL SPECIES 23 ENSGT00940000155600.a.a.h ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Climbing perch MODERN SPECIES 11 ENSATEG00000002418 ENSATEG00000027083 ENSATEG00000002431 ENSATEG00000002437 ENSATEG00000002594 ADAMTS5 (ENSATEG00000002612) ADAMTS1 (ENSATEG00000002657) cyyr1 (ENSATEG00000026837) APP (ENSATEG00000002720) atp5pf (ENSATEG00000029666) jam2a (ENSATEG00000028214) mrpl39 (ENSATEG00000002815) ENSATEG00000002914 ENSATEG00000002926 ENSATEG00000003002 ENSATEG00000003057 #22 ENSATEG00000003091 #23 abcb6a (ENSATEG00000003125) cnppd1 (ENSATEG00000027513) ENSATEG00000003266 retreg2 (ENSATEG00000003440) mdh1b (ENSATEG00000003523) #33 ENSATEG00000003650 #34 ENSATEG00000003664 raph1b (ENSATEG00000003709) #19 spp2 (ENSATEG00000003777) alg11 (ENSATEG00000003821) cpb2 (ENSATEG00000003852) zc3h13 (ENSATEG00000003937) ENSATEG00000003942 ENSATEG00000029382 Siamese fighting fish DUPLICATION Siamese fighting fish MODERN SPECIES 11 ENSBSLG00000021248 nepro (ENSBSLG00000021305) RALB (ENSBSLG00000021323) BZW1 (ENSBSLG00000022377) MYO1B (ENSBSLG00000022571) ENSBSLG00000023171 ENSBSLG00000023185 WNT6 (ENSBSLG00000023206) wnt10a (ENSBSLG00000023221) cdk5r2b (ENSBSLG00000023223) fev (ENSBSLG00000023227) cryba2b (ENSBSLG00000023236) umps (ENSBSLG00000023253) fn1a (ENSBSLG00000023376) ENSBSLG00000023457 ENSBSLG00000023482 #22 nrp2b (ENSBSLG00000023518) #23 epb41l5 (ENSBSLG00000023669) ptpn4a (ENSBSLG00000023717) tmem177 (ENSBSLG00000023772) MRAS (ENSBSLG00000023775) pth2ra (ENSBSLG00000023777) ENSBSLG00000023785 ENSBSLG00000023793 tmem163a (ENSBSLG00000023801) acmsd (ENSBSLG00000023809) ccnt2a (ENSBSLG00000023823) MAP3K19 (ENSBSLG00000023833) ramp1 (ENSBSLG00000023873) ube2f (ENSBSLG00000023893) zgc:162780 (ENSBSLG00000023956) Siamese fighting fish MODERN SPECIES 10 ENSBSLG00000000799 ENSBSLG00000000989 ENSBSLG00000001194 ENSBSLG00000001214 ENSBSLG00000001255 ADAMTS5 (ENSBSLG00000001313) ADAMTS1 (ENSBSLG00000001319) cyyr1 (ENSBSLG00000001324) APP (ENSBSLG00000001758) atp5pf (ENSBSLG00000002089) jam2a (ENSBSLG00000002091) mrpl39 (ENSBSLG00000002094) rap2ab (ENSBSLG00000002096) ENSBSLG00000002097 mbnl2 (ENSBSLG00000002098) pard3ba (ENSBSLG00000002100) #22 ENSBSLG00000002117 #23 abcb6a (ENSBSLG00000003121) cnppd1 (ENSBSLG00000003184) ENSBSLG00000003198 retreg2 (ENSBSLG00000003229) mdh1b (ENSBSLG00000003231) #33 ENSBSLG00000003233 #34 ENSBSLG00000003239 mdh1b (ENSBSLG00000003242) #33 ENSBSLG00000003247 #34 ENSBSLG00000003260 spp2 (ENSBSLG00000003287) alg11 (ENSBSLG00000003291) zc3h13 (ENSBSLG00000003293) rpl31 (ENSBSLG00000003300) Carangaria ANCESTRAL SPECIES 23 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 Carangaria_A ANCESTRAL SPECIES 23 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00970000198177 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 Seriola ANCESTRAL SPECIES 126 ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Greater amberjack MODERN SPECIES 246 jam2a (ENSSDUG00000021520) atp5pf (ENSSDUG00000021530) mrpl39 (ENSSDUG00000021539) rap2ab (ENSSDUG00000021548) mbnl2 (ENSSDUG00000021551) ENSSDUG00000021568 ENSSDUG00000021584 #22 nrp2a (ENSSDUG00000021601) #23 abcb6a (ENSSDUG00000021632) cnppd1 (ENSSDUG00000021656) ENSSDUG00000021661 retreg2 (ENSSDUG00000021672) mdh1b (ENSSDUG00000021689) #33 ENSSDUG00000021702 #34 ENSSDUG00000021713 raph1b (ENSSDUG00000021717) #19 ENSSDUG00000021755 alg11 (ENSSDUG00000021786) cpb2 (ENSSDUG00000021792) zc3h13 (ENSSDUG00000021808) rpl31 (ENSSDUG00000021821) chst10 (ENSSDUG00000021826) Yellowtail amberjack MODERN SPECIES 3221 zgc:65895 (ENSSLDG00000013567) chn1 (ENSSLDG00000013541) ENSSLDG00000013526 FARP1 (ENSSLDG00000013411) ggact.3 (ENSSLDG00000013514) arl13b (ENSSLDG00000013361) NCAM2 (ENSSLDG00000013314) gart (ENSSLDG00000013225) n6amt1 (ENSSLDG00000013280) atp5pf (ENSSLDG00000013207) jam2a (ENSSLDG00000013189) mrpl39 (ENSSLDG00000013175) rap2ab (ENSSLDG00000013167) mbnl2 (ENSSLDG00000013155) ENSSLDG00000013129 ENSSLDG00000013100 #22 nrp2a (ENSSLDG00000013049) #23 abcb6a (ENSSLDG00000012975) cnppd1 (ENSSLDG00000012942) ENSSLDG00000012921 retreg2 (ENSSLDG00000012892) mdh1b (ENSSLDG00000012802) #33 ENSSLDG00000012753 #34 ENSSLDG00000012772 raph1b (ENSSLDG00000012713) #19 spp2 (ENSSLDG00000012693) alg11 (ENSSLDG00000012678) cpb2 (ENSSLDG00000012664) ENSSLDG00000012646 ENSSLDG00000012610 chst10 (ENSSLDG00000012582) Barramundi perch MODERN SPECIES 157 GPR34 (ENSLCAG00010024469) cenpl (ENSLCAG00010024471) FUNDC1 (ENSLCAG00010024476) kdm6al (ENSLCAG00010025784) ENSLCAG00010026926 ADAMTS5 (ENSLCAG00010026928) ADAMTS1 (ENSLCAG00010026929) cyyr1 (ENSLCAG00010026931) APP (ENSLCAG00010026969) atp5pf (ENSLCAG00010027040) jam2a (ENSLCAG00010027041) mrpl39 (ENSLCAG00010027043) rap2ab (ENSLCAG00010027045) mbnl2 (ENSLCAG00010027049) ENSLCAG00010027052 ENSLCAG00010027054 #22 nrp2a (ENSLCAG00010027064) #23 ENSLCAG00010027080 abcb6a (ENSLCAG00010027087) cnppd1 (ENSLCAG00010027105) ENSLCAG00010027107 retreg2 (ENSLCAG00010027109) mdh1b (ENSLCAG00010027110) #33 ENSLCAG00010027111 #34 ENSLCAG00010027112 raph1b (ENSLCAG00010027114) #19 spp2 (ENSLCAG00010027126) alg11 (ENSLCAG00010027128) cpb2 (ENSLCAG00010027135) rpl31 (ENSLCAG00010027148) chst10 (ENSLCAG00010027159) Pleuronectoidei ANCESTRAL SPECIES 42 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Tongue sole MODERN SPECIES 5 MAP4K4 (ENSCSEG00000010125) chst10 (ENSCSEG00000010162) rpl31 (ENSCSEG00000010181) zc3h13 (ENSCSEG00000010275) cpb2 (ENSCSEG00000010303) alg11 (ENSCSEG00000010341) raph1b (ENSCSEG00000010351) #19 raph1b (ENSCSEG00000010358) #19 cd28 (ENSCSEG00000010375) ENSCSEG00000010396 #34 mdh1b (ENSCSEG00000010427) #33 retreg2 (ENSCSEG00000010438) ENSCSEG00000010452 cnppd1 (ENSCSEG00000010476) abcb6a (ENSCSEG00000010487) pard3ba (ENSCSEG00000010523) #22 nrp2a (ENSCSEG00000010558) #23 ENSCSEG00000010808 mbnl2 (ENSCSEG00000010815) ENSCSEG00000010847 mrpl39 (ENSCSEG00000010854) jam2a (ENSCSEG00000010875) atp5pf (ENSCSEG00000010884) ZSWIM6 (ENSCSEG00000010893) si:ch73-234b20.5 (ENSCSEG00000010922) hnrnpd (ENSCSEG00000010909) enoph1 (ENSCSEG00000010924) sec31a (ENSCSEG00000010931) lin54 (ENSCSEG00000011040) cops4 (ENSCSEG00000011083) plac8.1 (ENSCSEG00000011107) Turbot MODERN SPECIES ENSSMAG00000005501 ENSSMAG00000005546 ENSSMAG00000037945 ENSSMAG00000005559 ENSSMAG00000005721 ADAMTS5 (ENSSMAG00000005793) ADAMTS1 (ENSSMAG00000005814) cyyr1 (ENSSMAG00000035670) APP (ENSSMAG00000005840) atp5pf (ENSSMAG00000036307) jam2a (ENSSMAG00000006003) mrpl39 (ENSSMAG00000006033) ENSSMAG00000006055 ENSSMAG00000006063 ENSSMAG00000006156 ENSSMAG00000006175 #22 ENSSMAG00000006232 #23 abcb6a (ENSSMAG00000006353) cnppd1 (ENSSMAG00000036984) ENSSMAG00000006464 retreg2 (ENSSMAG00000006969) mdh1b (ENSSMAG00000006973) #33 ENSSMAG00000006986 #34 ENSSMAG00000006998 raph1b (ENSSMAG00000007021) #19 spp2 (ENSSMAG00000028508) alg11 (ENSSMAG00000007070) cpb2 (ENSSMAG00000007082) zc3h13 (ENSSMAG00000007110) ENSSMAG00000007130 ENSSMAG00000025555 Ovalentaria ANCESTRAL SPECIES 23 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 Atherinomorphae ANCESTRAL SPECIES 24 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 Cyprinodontiformes ANCESTRAL SPECIES 25 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Aplocheiloidei ANCESTRAL SPECIES 37 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00950000183030 ENSGT00730000111163 ENSGT00940000157128 ENSGT00940000155063.a.b Mangrove rivulus MODERN SPECIES 230 cndp1 (ENSKMAG00000020071) taf2 (ENSKMAG00000020003) ENSKMAG00000019955 ENSKMAG00000019942 ENSKMAG00000019904 ENSKMAG00000019884 ENSKMAG00000019836 #22 nrp2a (ENSKMAG00000019806) #23 abcb6a (ENSKMAG00000019733) cnppd1 (ENSKMAG00000019713) ENSKMAG00000019699 retreg2 (ENSKMAG00000019678) mdh1b (ENSKMAG00000019619) #33 ENSKMAG00000019526 #34 ENSKMAG00000019482 raph1b (ENSKMAG00000019447) #19 alg11 (ENSKMAG00000019422) cpb2 (ENSKMAG00000019399) Cyprinodontoidei ANCESTRAL SPECIES 26 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Poeciliinae ANCESTRAL SPECIES 23 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b.e #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Poecilia ANCESTRAL SPECIES 30 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b.e #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b NAME_6 ANCESTRAL SPECIES 58 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b.e #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Amazon molly MODERN SPECIES 424 caskb (ENSPFOG00000000759) GPR34 (ENSPFOG00000020118) cenpl (ENSPFOG00000000981) FUNDC1 (ENSPFOG00000001039) kdm6al (ENSPFOG00000001326) ENSPFOG00000001819 ADAMTS5 (ENSPFOG00000001970) ADAMTS1 (ENSPFOG00000022859) cyyr1 (ENSPFOG00000002261) APP (ENSPFOG00000002304) atp5pf (ENSPFOG00000002501) jam2a (ENSPFOG00000002554) mrpl39 (ENSPFOG00000002698) rap2ab (ENSPFOG00000002822) mbnl2 (ENSPFOG00000002871) ENSPFOG00000003029 #22 nrp2a (ENSPFOG00000003190) #23 abcb6a (ENSPFOG00000003536) cnppd1 (ENSPFOG00000003799) ENSPFOG00000003866 retreg2 (ENSPFOG00000003980) mdh1b (ENSPFOG00000004105) #33 ENSPFOG00000004234 #34 ENSPFOG00000004383 raph1b (ENSPFOG00000004388) #19 alg11 (ENSPFOG00000004511) cpb2 (ENSPFOG00000004589) zc3h13 (ENSPFOG00000005039) rpl31 (ENSPFOG00000005045) chst10 (ENSPFOG00000005122) MAP4K4 (ENSPFOG00000005245) Sailfin molly MODERN SPECIES 901 ENSPLAG00000015907 ENSPLAG00000015870 #22 ENSPLAG00000015854 #23 Platyfish MODERN SPECIES 16 ADAMTS1 (ENSXMAG00000009137) ENSXMAG00000014363 ENSXMAG00000029865 ENSXMAG00000021851 ENSXMAG00000028265 ENSXMAG00000024120 ENSXMAG00000025620 cyyr1 (ENSXMAG00000023089) APP (ENSXMAG00000012674) atp5pf (ENSXMAG00000012670) jam2a (ENSXMAG00000012650) mrpl39 (ENSXMAG00000012643) rap2ab (ENSXMAG00000013101) mbnl2 (ENSXMAG00000012618) ENSXMAG00000023101 ENSXMAG00000012604 #22 nrp2a (ENSXMAG00000012521) #23 abcb6a (ENSXMAG00000003010) cnppd1 (ENSXMAG00000003024) ENSXMAG00000003025 retreg2 (ENSXMAG00000025935) mdh1b (ENSXMAG00000012494) #33 ENSXMAG00000012482 #34 ENSXMAG00000024149 raph1b (ENSXMAG00000012467) #19 alg11 (ENSXMAG00000012465) cpb2 (ENSXMAG00000012438) zc3h13 (ENSXMAG00000012423) rpl31 (ENSXMAG00000012419) chst10 (ENSXMAG00000028772) MAP4K4 (ENSXMAG00000012364) NAME_4 ANCESTRAL SPECIES 76 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518.o ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Sheepshead minnow MODERN SPECIES 554 rap2ab (ENSCVAG00000015244) mbnl2 (ENSCVAG00000015236) ENSCVAG00000015174 ENSCVAG00000015030 #22 nrp2a (ENSCVAG00000015007) #23 abcb6a (ENSCVAG00000014976) cnppd1 (ENSCVAG00000014926) ENSCVAG00000000960 retreg2 (ENSCVAG00000014895) mdh1b (ENSCVAG00000014875) #33 ENSCVAG00000014766 #34 ENSCVAG00000014757 raph1b (ENSCVAG00000014733) #19 alg11 (ENSCVAG00000014672) cpb2 (ENSCVAG00000014667) zc3h13 (ENSCVAG00000014663) rpl31 (ENSCVAG00000014641) chst10 (ENSCVAG00000014623) ENSCVAG00000014603 Mummichog DUPLICATION Mummichog MODERN SPECIES 2500 ENSFHEG00000004172 ENSFHEG00000004179 umps (ENSFHEG00000004188) fn1a (ENSFHEG00000008680) ENSFHEG00000008933 ENSFHEG00000008950 #22 nrp2b (ENSFHEG00000008974) #23 epb41l5 (ENSFHEG00000009006) ptpn4a (ENSFHEG00000009074) Mummichog MODERN SPECIES 980 caskb (ENSFHEG00000019856) cenpl (ENSFHEG00000019874) FUNDC1 (ENSFHEG00000019897) kdm6al (ENSFHEG00000020075) ENSFHEG00000020146 ADAMTS5 (ENSFHEG00000020158) ADAMTS1 (ENSFHEG00000020221) cyyr1 (ENSFHEG00000020273) APP (ENSFHEG00000020327) atp5pf (ENSFHEG00000020336) jam2a (ENSFHEG00000020353) mrpl39 (ENSFHEG00000020373) rap2ab (ENSFHEG00000020379) mbnl2 (ENSFHEG00000020400) ENSFHEG00000020418 ENSFHEG00000020434 #22 nrp2a (ENSFHEG00000020462) #23 abcb6a (ENSFHEG00000020529) cnppd1 (ENSFHEG00000020537) ENSFHEG00000020542 retreg2 (ENSFHEG00000000729) mdh1b (ENSFHEG00000020591) #33 ENSFHEG00000020606 #34 ENSFHEG00000020630 raph1b (ENSFHEG00000020732) #19 alg11 (ENSFHEG00000020747) cpb2 (ENSFHEG00000020769) ENSFHEG00000020784 ENSFHEG00000020795 rpl31 (ENSFHEG00000020810) chst10 (ENSFHEG00000020855) Oryzias ANCESTRAL SPECIES 26 ENSGT00940000157269.a.b ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT01030000235083 ENSGT00940000165996 ENSGT00730000111163 ENSGT00950000183030 Oryzias_a ANCESTRAL SPECIES 28 ENSGT00940000157269.a.b ENSGT00940000155360.B.k ENSGT00940000162479.a ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 ENSGT00950000183030 Japanese Medaka HdrR MODERN SPECIES 11 arhgef7b (ENSORLG00000005832) ENSORLG00000027672 ATP11A (ENSORLG00000005793) tubgcp3 (ENSORLG00000005732) ENSORLG00000025057 ENSORLG00000025753 rcbtb1 (ENSORLG00000005672) cdadc1 (ENSORLG00000005666) cab39l (ENSORLG00000005654) ENSORLG00000005630 ENSORLG00000005481 mrpl39 (ENSORLG00000005447) rap2ab (ENSORLG00000005426) mbnl2 (ENSORLG00000005419) ENSORLG00000005414 ENSORLG00000025601 #22 nrp2a (ENSORLG00000005395) #23 abcb6a (ENSORLG00000005333) cnppd1 (ENSORLG00000005312) ENSORLG00000005307 retreg2 (ENSORLG00000005285) mdh1b (ENSORLG00000005272) #33 ENSORLG00000005262 #34 ENSORLG00000005254 raph1b (ENSORLG00000005250) #19 alg11 (ENSORLG00000005232) cpb2 (ENSORLG00000005225) zc3h13 (ENSORLG00000005201) rpl31 (ENSORLG00000005178) chst10 (ENSORLG00000005171) MAP4K4 (ENSORLG00000005156) Chinese medaka MODERN SPECIES 23 unc50 (ENSOSIG00000012150) ENSOSIG00000012151 ENSOSIG00000012152 arhgef7b (ENSOSIG00000012154) ATP11A (ENSOSIG00000012166) tubgcp3 (ENSOSIG00000013177) ENSOSIG00000013183 rcbtb1 (ENSOSIG00000013184) cdadc1 (ENSOSIG00000013188) cab39l (ENSOSIG00000013191) MCF2L (ENSOSIG00000013196) ENSOSIG00000013224 mrpl39 (ENSOSIG00000013673) rap2ab (ENSOSIG00000013675) mbnl2 (ENSOSIG00000013683) ENSOSIG00000013793 #22 nrp2a (ENSOSIG00000013827) #23 abcb6a (ENSOSIG00000000003) cnppd1 (ENSOSIG00000000013) retreg2 (ENSOSIG00000000032) ENSOSIG00000000045 #34 ENSOSIG00000000052 raph1b (ENSOSIG00000000169) #19 alg11 (ENSOSIG00000000590) cpb2 (ENSOSIG00000000591) ENSOSIG00000000592 ENSOSIG00000000594 rpl31 (ENSOSIG00000000598) chst10 (ENSOSIG00000000602) ENSOSIG00000000647 ENSOSIG00000010322 Oryzias_b ANCESTRAL SPECIES 76 ENSGT00940000157849.n.c ENSGT00940000157872 ENSGT00940000156984.a.a ENSGT00940000155814.m ENSGT00940000153676.b ENSGT00390000004360.a.b.a.a.b ENSGT00940000157874.q.a ENSGT01090000260082.d.a.b.o.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 ENSGT00940000155063.a.b Indian medaka MODERN SPECIES 24 dnm1b (ENSOMEG00000008742) ENSOMEG00000008681 ATP11A (ENSOMEG00000008640) tubgcp3 (ENSOMEG00000008513) FGF14 (ENSOMEG00000008408) rcbtb1 (ENSOMEG00000008349) cdadc1 (ENSOMEG00000008283) cab39l (ENSOMEG00000008249) MCF2L (ENSOMEG00000008166) ENSOMEG00000007964 ENSOMEG00000007881 rap2ab (ENSOMEG00000007869) mbnl2 (ENSOMEG00000007821) ENSOMEG00000007712 ENSOMEG00000007702 ENSOMEG00000007632 #22 ENSOMEG00000007428 nrp2a (ENSOMEG00000007409) #23 abcb6a (ENSOMEG00000007360) cnppd1 (ENSOMEG00000007313) ENSOMEG00000007283 retreg2 (ENSOMEG00000007242) mdh1b (ENSOMEG00000007226) #33 ENSOMEG00000007199 #34 ENSOMEG00000007170 raph1b (ENSOMEG00000007149) #19 alg11 (ENSOMEG00000007110) cpb2 (ENSOMEG00000007089) zc3h13 (ENSOMEG00000007044) rpl31 (ENSOMEG00000006975) chst10 (ENSOMEG00000006938) Javanese ricefish MODERN SPECIES 11 FGF14 (ENSOJAG00000011821) ENSOJAG00000011800 ENSOJAG00000011745 ENSOJAG00000011730 rcbtb1 (ENSOJAG00000011586) cdadc1 (ENSOJAG00000011573) cab39l (ENSOJAG00000011564) MCF2L (ENSOJAG00000009688) ENSOJAG00000008325 mrpl39 (ENSOJAG00000008285) ENSOJAG00000008271 mbnl2 (ENSOJAG00000008159) ENSOJAG00000008127 ENSOJAG00000008098 ENSOJAG00000008044 ENSOJAG00000008014 #22 nrp2a (ENSOJAG00000005308) #23 cnppd1 (ENSOJAG00000004998) ENSOJAG00000004832 retreg2 (ENSOJAG00000004813) mdh1b (ENSOJAG00000004804) #33 ENSOJAG00000004773 #34 ENSOJAG00000004700 cpb2 (ENSOJAG00000004393) ENSOJAG00000004385 rpl31 (ENSOJAG00000004333) alg11 (ENSOJAG00000004306) chst10 (ENSOJAG00000004285) ENSOJAG00000003415 ENSOJAG00000003322 KYNU (ENSOJAG00000003284) Ovalentaria_B ANCESTRAL SPECIES 22 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Pomacentridae ANCESTRAL SPECIES 124 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT01030000235083 ENSGT00940000165996 Bicolor damselfish MODERN SPECIES 486 ENSSPAG00000012476 ADAMTS5 (ENSSPAG00000012506) ADAMTS1 (ENSSPAG00000012554) cyyr1 (ENSSPAG00000012565) APP (ENSSPAG00000012605) atp5pf (ENSSPAG00000012713) jam2a (ENSSPAG00000012735) mrpl39 (ENSSPAG00000012772) rap2ab (ENSSPAG00000012796) mbnl2 (ENSSPAG00000012815) ENSSPAG00000012886 pard3ba (ENSSPAG00000012916) #22 nrp2a (ENSSPAG00000012968) #23 Pomacentridae_A ANCESTRAL SPECIES 101 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00940000155360.B.k ENSGT00940000162479.a Amphiprion ANCESTRAL SPECIES 123 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00940000155360.B.k ENSGT00940000162479.a Orange clownfish MODERN SPECIES 16 FUNDC1 (ENSAPEG00000003073) kdm6al (ENSAPEG00000003112) ENSAPEG00000003263 ADAMTS5 (ENSAPEG00000003387) ADAMTS1 (ENSAPEG00000003424) cyyr1 (ENSAPEG00000003448) APP (ENSAPEG00000003479) atp5pf (ENSAPEG00000003584) jam2a (ENSAPEG00000003615) ENSAPEG00000003668 ENSAPEG00000003731 mrpl39 (ENSAPEG00000003747) rap2ab (ENSAPEG00000003838) mbnl2 (ENSAPEG00000003855) ENSAPEG00000003911 ENSAPEG00000003994 #22 nrp2a (ENSAPEG00000004033) #23 abcb6a (ENSAPEG00000004056) cnppd1 (ENSAPEG00000004153) ENSAPEG00000004243 retreg2 (ENSAPEG00000004582) mdh1b (ENSAPEG00000004592) #33 ENSAPEG00000004691 #34 ENSAPEG00000004708 raph1b (ENSAPEG00000004718) #19 spp2 (ENSAPEG00000004789) alg11 (ENSAPEG00000004804) cpb2 (ENSAPEG00000004843) zc3h13 (ENSAPEG00000004887) arhgef7b (ENSAPEG00000004982) SOX1 (ENSAPEG00000005036) Spiny chromis MODERN SPECIES 230 ENSAPOG00000008231 ADAMTS5 (ENSAPOG00000008121) ADAMTS1 (ENSAPOG00000008106) cyyr1 (ENSAPOG00000008098) APP (ENSAPOG00000008075) atp5pf (ENSAPOG00000007970) jam2a (ENSAPOG00000007947) mrpl39 (ENSAPOG00000007908) rap2ab (ENSAPOG00000007886) mbnl2 (ENSAPOG00000007868) ENSAPOG00000007796 ENSAPOG00000007741 #22 Cichlidae ANCESTRAL SPECIES 30 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 ENSGT00940000157128 Midas cichlid MODERN SPECIES 353 cenpl (ENSACIG00000019963) FUNDC1 (ENSACIG00000019994) kdm6al (ENSACIG00000020006) ENSACIG00000020057 ADAMTS5 (ENSACIG00000020085) ADAMTS1 (ENSACIG00000020109) cyyr1 (ENSACIG00000020139) APP (ENSACIG00000020156) atp5pf (ENSACIG00000020186) jam2a (ENSACIG00000020203) mrpl39 (ENSACIG00000020239) rap2ab (ENSACIG00000020257) mbnl2 (ENSACIG00000020330) ENSACIG00000000161 ENSACIG00000000238 ENSACIG00000000253 #22 nrp2a (ENSACIG00000000266) #23 abcb6a (ENSACIG00000000321) cnppd1 (ENSACIG00000000528) ENSACIG00000000557 retreg2 (ENSACIG00000000674) ENSACIG00000000704 #34 mdh1b (ENSACIG00000000744) #33 ENSACIG00000000837 raph1b (ENSACIG00000000865) #19 spp2 (ENSACIG00000001105) alg11 (ENSACIG00000001151) cpb2 (ENSACIG00000001169) zc3h13 (ENSACIG00000001200) rpl31 (ENSACIG00000001260) chst10 (ENSACIG00000001277) Pseudocrenilabrinae ANCESTRAL SPECIES 25 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Nile tilapia MODERN SPECIES 14 cenpl (ENSONIG00000012114) FUNDC1 (ENSONIG00000012115) kdm6al (ENSONIG00000012116) ENSONIG00000012142 ADAMTS5 (ENSONIG00000012151) ADAMTS1 (ENSONIG00000012152) cyyr1 (ENSONIG00000012153) APP (ENSONIG00000012154) atp5pf (ENSONIG00000037671) jam2a (ENSONIG00000031319) mrpl39 (ENSONIG00000012163) rap2ab (ENSONIG00000041504) mbnl2 (ENSONIG00000012173) ENSONIG00000012180 ENSONIG00000034440 ENSONIG00000012185 #22 nrp2a (ENSONIG00000012186) #23 abcb6a (ENSONIG00000012196) cnppd1 (ENSONIG00000040328) ENSONIG00000012200 retreg2 (ENSONIG00000038099) mdh1b (ENSONIG00000012210) #33 ENSONIG00000012215 #34 ENSONIG00000037064 raph1b (ENSONIG00000012220) #19 spp2 (ENSONIG00000039515) alg11 (ENSONIG00000012226) cpb2 (ENSONIG00000012227) zc3h13 (ENSONIG00000012236) rpl31 (ENSONIG00000033747) chst10 (ENSONIG00000012254) Pseudocrenilabrinae_A ANCESTRAL SPECIES 29 ENSGT01060000248589.C.g.b ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Lyretail cichlid MODERN SPECIES 422 ENSNBRG00000009034 ADAMTS5 (ENSNBRG00000008970) ADAMTS1 (ENSNBRG00000008928) APP (ENSNBRG00000008868) atp5pf (ENSNBRG00000008852) jam2a (ENSNBRG00000008806) mrpl39 (ENSNBRG00000008781) rap2ab (ENSNBRG00000008672) mbnl2 (ENSNBRG00000008611) ENSNBRG00000008569 ENSNBRG00000008405 #22 nrp2a (ENSNBRG00000008034) #23 abcb6a (ENSNBRG00000007940) abcb6a (ENSNBRG00000007882) cnppd1 (ENSNBRG00000007866) ENSNBRG00000007411 retreg2 (ENSNBRG00000007319) mdh1b (ENSNBRG00000007258) #33 ENSNBRG00000007232 ENSNBRG00000007222 #34 raph1b (ENSNBRG00000007182) #19 ENSNBRG00000007138 alg11 (ENSNBRG00000007121) cpb2 (ENSNBRG00000007109) ENSNBRG00000007093 rpl31 (ENSNBRG00000007076) Haplochromini ANCESTRAL SPECIES 26 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Burton s mouthbrooder MODERN SPECIES 303 FUNDC1 (ENSHBUG00000008190) cenpl (ENSHBUG00000008162) kdm6al (ENSHBUG00000008121) ENSHBUG00000007893 ENSHBUG00000007866 ADAMTS5 (ENSHBUG00000007837) ADAMTS1 (ENSHBUG00000007828) cyyr1 (ENSHBUG00000007817) APP (ENSHBUG00000007800) atp5pf (ENSHBUG00000007678) jam2a (ENSHBUG00000007673) mrpl39 (ENSHBUG00000001132) rap2ab (ENSHBUG00000007655) mbnl2 (ENSHBUG00000007641) ENSHBUG00000007547 ENSHBUG00000007533 #22 nrp2a (ENSHBUG00000007507) #23 abcb6a (ENSHBUG00000007448) abcb6a (ENSHBUG00000007414) cnppd1 (ENSHBUG00000007382) ENSHBUG00000007370 retreg2 (ENSHBUG00000007360) mdh1b (ENSHBUG00000007343) #33 ENSHBUG00000007258 #34 ENSHBUG00000007244 raph1b (ENSHBUG00000007232) #19 spp2 (ENSHBUG00000007129) ENSHBUG00000007121 cpb2 (ENSHBUG00000007107) zc3h13 (ENSHBUG00000007100) rpl31 (ENSHBUG00000007089) Haplochromini_A ANCESTRAL SPECIES 29 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00730000111163 ENSGT00950000183030 Haplochromini_B ANCESTRAL SPECIES 38 ENSGT00390000013877 ENSGT00940000154517.nb ENSGT00940000166518 ENSGT01020000231905 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a.b ENSGT00940000156160.b.a.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00990000203779 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k ENSGT00940000159160.e ENSGT00730000111163 ENSGT00950000183030 Eastern happy MODERN SPECIES 14 cenpl (ENSACLG00000027756) FUNDC1 (ENSACLG00000027758) kdm6al (ENSACLG00000027762) ENSACLG00000027789 ENSACLG00000027794 ADAMTS5 (ENSACLG00000027795) ADAMTS1 (ENSACLG00000027798) cyyr1 (ENSACLG00000027800) APP (ENSACLG00000027804) atp5pf (ENSACLG00000027816) jam2a (ENSACLG00000027826) mrpl39 (ENSACLG00000027830) rap2ab (ENSACLG00000027833) mbnl2 (ENSACLG00000027836) ENSACLG00000027850 ENSACLG00000027852 #22 nrp2a (ENSACLG00000027856) #23 abcb6a (ENSACLG00000027863) abcb6a (ENSACLG00000027885) cnppd1 (ENSACLG00000027887) ENSACLG00000027888 retreg2 (ENSACLG00000027890) mdh1b (ENSACLG00000027891) #33 ENSACLG00000027894 #34 ENSACLG00000027896 raph1b (ENSACLG00000027897) #19 spp2 (ENSACLG00000027900) alg11 (ENSACLG00000027899) cpb2 (ENSACLG00000027901) zc3h13 (ENSACLG00000027909) rpl31 (ENSACLG00000027911) Zebra mbuna MODERN SPECIES 1105 kdm6al (ENSMZEG00005005193) ENSMZEG00005005364 ENSMZEG00005005388 ENSMZEG00005005395 ENSMZEG00005005415 ADAMTS5 (ENSMZEG00005005473) ADAMTS1 (ENSMZEG00005005487) cyyr1 (ENSMZEG00005005495) APP (ENSMZEG00005005527) atp5pf (ENSMZEG00005005577) jam2a (ENSMZEG00005005589) mrpl39 (ENSMZEG00005005596) rap2ab (ENSMZEG00005005602) mbnl2 (ENSMZEG00005005609) ENSMZEG00005005621 ENSMZEG00005005636 #22 nrp2a (ENSMZEG00005005655) #23 abcb6a (ENSMZEG00005005689) abcb6a (ENSMZEG00005005732) cnppd1 (ENSMZEG00005005755) ENSMZEG00005005775 retreg2 (ENSMZEG00005005803) mdh1b (ENSMZEG00005005818) #33 ENSMZEG00005005856 #34 ENSMZEG00005005871 raph1b (ENSMZEG00005005956) #19 spp2 (ENSMZEG00005007388) raph1b (ENSMZEG00005007411) #19 ENSMZEG00005007444 cpb2 (ENSMZEG00005007453) zc3h13 (ENSMZEG00005007473) P. nyererei DUPLICATION P. nyererei MODERN SPECIES 430 ENSPNYG00000006498 LRP1B (ENSPNYG00000006319) BZW1 (ENSPNYG00000006245) MYO1B (ENSPNYG00000006160) mnx2a (ENSPNYG00000006079) ENSPNYG00000006042 ENSPNYG00000006000 ##34 WNT6 (ENSPNYG00000005978) wnt10a (ENSPNYG00000005950) cdk5r2b (ENSPNYG00000005938) fev (ENSPNYG00000005923) cryba2b (ENSPNYG00000005892) umps (ENSPNYG00000005838) fn1a (ENSPNYG00000005692) ENSPNYG00000005662 #22 ENSPNYG00000005648 #22 nrp2b (ENSPNYG00000005599) #23 epb41l5 (ENSPNYG00000005555) ptpn4a (ENSPNYG00000005464) tmem177 (ENSPNYG00000005436) MRAS (ENSPNYG00000005416) P. nyererei MODERN SPECIES 335 caskb (ENSPNYG00000021755) cenpl (ENSPNYG00000021722) FUNDC1 (ENSPNYG00000021705) kdm6al (ENSPNYG00000017996) ENSPNYG00000017067 ADAMTS5 (ENSPNYG00000017044) ADAMTS1 (ENSPNYG00000017011) cyyr1 (ENSPNYG00000016990) APP (ENSPNYG00000016921) atp5pf (ENSPNYG00000016897) jam2a (ENSPNYG00000016883) mrpl39 (ENSPNYG00000016871) rap2ab (ENSPNYG00000016763) mbnl2 (ENSPNYG00000016734) ENSPNYG00000016688 ENSPNYG00000016622 #22 nrp2a (ENSPNYG00000016558) #23 abcb6a (ENSPNYG00000016502) cnppd1 (ENSPNYG00000016487) ENSPNYG00000016453 retreg2 (ENSPNYG00000016414) mdh1b (ENSPNYG00000016342) #33 ENSPNYG00000016302 #34 ENSPNYG00000016292 raph1b (ENSPNYG00000016134) #19 spp2 (ENSPNYG00000016100) alg11 (ENSPNYG00000016075) cpb2 (ENSPNYG00000016049) zc3h13 (ENSPNYG00000016000) rpl31 (ENSPNYG00000015985) chst10 (ENSPNYG00000015962) Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 13 tuba8l2 (ENSMMDG00005023841) ENSMMDG00005023838 ENSMMDG00005023837 ENSMMDG00005023835 ##34 WNT6 (ENSMMDG00005023833) wnt10a (ENSMMDG00005023832) ENSMMDG00005023829 ENSMMDG00005023828 fev (ENSMMDG00005023827) cryba2b (ENSMMDG00005023825) umps (ENSMMDG00005023818) fn1a (ENSMMDG00005016586) ENSMMDG00005016265 ENSMMDG00005016261 #35 ENSMMDG00005016257 #22 ENSMMDG00005016255 #22 nrp2b (ENSMMDG00005016249) #23 epb41l5 (ENSMMDG00005016153) ptpn4a (ENSMMDG00005015701) tmem177 (ENSMMDG00005015667) MRAS (ENSMMDG00005015654) pth2ra (ENSMMDG00005015640) ENSMMDG00005015629 ENSMMDG00005015621 tmem163a (ENSMMDG00005015619) acmsd (ENSMMDG00005015615) ccnt2a (ENSMMDG00005015604) ENSMMDG00005015599 ramp1 (ENSMMDG00005015595) ube2f (ENSMMDG00005015591) zgc:162780 (ENSMMDG00005015590) Pinecone sodierfish MODERN SPECIES 11 cenpl (ENSMMDG00005022234) FUNDC1 (ENSMMDG00005022220) kdm6al (ENSMMDG00005022160) ENSMMDG00005022155 ADAMTS5 (ENSMMDG00005022150) ADAMTS1 (ENSMMDG00005022147) cyyr1 (ENSMMDG00005022146) APP (ENSMMDG00005021851) atp5pf (ENSMMDG00005021842) jam2a (ENSMMDG00005021838) mrpl39 (ENSMMDG00005021836) rap2ab (ENSMMDG00005021834) mbnl2 (ENSMMDG00005021786) ENSMMDG00005021776 ENSMMDG00005021774 ENSMMDG00005021773 #22 nrp2a (ENSMMDG00005021768) #23 abcb6a (ENSMMDG00005021717) cnppd1 (ENSMMDG00005021702) ENSMMDG00005021587 retreg2 (ENSMMDG00005021581) mdh1b (ENSMMDG00005021579) #33 ENSMMDG00005021577 #34 ENSMMDG00005021573 raph1b (ENSMMDG00005021460) #19 spp2 (ENSMMDG00005021455) cpb2 (ENSMMDG00005021453) alg11 (ENSMMDG00005021449) cpb2 (ENSMMDG00005021445) zc3h13 (ENSMMDG00005021439) RPL31 (ENSMMDG00005021436) Protacanthopterygii ANCESTRAL SPECIES 138 ENSGT00940000157860 ENSGT00390000000292.B ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090 ENSGT00940000156815 ENSGT00940000167257 ENSGT00530000063252.a.b.a.a ENSGT00390000008902.jb ENSGT00940000165208.a ENSGT00940000156271 ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00940000154394.b.a.b ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00940000178309 ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00940000175880 ENSGT00550000075118.k ENSGT00940000159160 ENSGT00390000001170.a.b Northern pike MODERN SPECIES 21 ENSELUG00000027041 cckbra (ENSELUG00000006768) ENSELUG00000006754 ENSELUG00000031338 ENSELUG00000006747 ENSELUG00000025311 ENSELUG00000029745 NCAM2 (ENSELUG00000020483) mrpl39 (ENSELUG00000020353) jam2a (ENSELUG00000020322) atp5pf (ENSELUG00000020272) rpz4 (ENSELUG00000020236) rpz (ENSELUG00000020232) ENSELUG00000020210 mbnl2 (ENSELUG00000020187) ENSELUG00000020140 #22 nrp2a (ENSELUG00000020100) #23 abcb6a (ENSELUG00000020023) ENSELUG00000015046 ENSELUG00000030556 ENSELUG00000012024 ENSELUG00000014987 ENSELUG00000007685 ENSELUG00000034465 zgc:172122 (ENSELUG00000012061) ENSELUG00000000435 u2af1 (ENSELUG00000011997) cbsa (ENSELUG00000011972) ENSELUG00000011923 HSF2BP (ENSELUG00000011905) TRAPPC10 (ENSELUG00000011855) Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 1820 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b.k #22 Salmoninae_a ANCESTRAL SPECIES 740 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b.k #22 Oncorhynchus ANCESTRAL SPECIES 623 ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b.k #22 Oncorhynchus_a ANCESTRAL SPECIES 6 ENSGT00940000155850.wb.b ENSGT00940000156564.b.c.a ENSGT00940000161407.b.d ENSGT00940000155696.ub.f ENSGT01100000263563.c.a.b.e ENSGT00940000157860.j ENSGT00390000000292.B.o.b ENSGT00940000159090.f ENSGT00940000156815.f ENSGT00940000167257.h.a ENSGT00530000063252.a.b.a.a.f ENSGT00390000008902.jb.d ENSGT00940000165208.a.c ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000235117 ENSGT00950000183214.a.b.a.b.f.b.b.k #22 ENSGT00940000155270.i.b.d #23 ENSGT00940000156160.b.a.e.b.a ENSGT00940000167257.h.b ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.a.a.b.a.b.a ENSGT00530000063410.b.i.b #33 ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b.j #19 ENSGT00550000075118.k.a ENSGT00940000159160.g ENSGT00390000001170.a.b.b ENSGT00940000153470.a.a.a.a.c.b.a.a ENSGT00940000159094.e.d ENSGT00950000182836.b.b.b.a.l.a Chinook salmon MODERN SPECIES 5 irs2a (ENSOTSG00005006784) NALF1 (ENSOTSG00005006772) cckbra (ENSOTSG00005006771) ENSOTSG00005006757 p2rx3b (ENSOTSG00005006755) ENSOTSG00005003379 ENSOTSG00005001941 ADAMTS5 (ENSOTSG00005046524) ADAMTS1 (ENSOTSG00005046523) cyyr1 (ENSOTSG00005046522) APP (ENSOTSG00005045345) atp5pf (ENSOTSG00005045331) jam2a (ENSOTSG00005045330) mbnl2 (ENSOTSG00005045329) ENSOTSG00005045327 ENSOTSG00005045326 #22 ENSOTSG00005045325 #23 ENSOTSG00005045324 #23 abcb6a (ENSOTSG00005044825) cnppd1 (ENSOTSG00005044815) ENSOTSG00005044813 retreg2 (ENSOTSG00005044814) ENSOTSG00005044812 mdh1b (ENSOTSG00005044811) #33 ENSOTSG00005044810 raph1b (ENSOTSG00005044808) #19 alg11 (ENSOTSG00005044804) cpb2 (ENSOTSG00005044803) TMEM163 (ENSOTSG00005044801) mgat5 (ENSOTSG00005044799) PTH2R (ENSOTSG00005044795) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00950000183214.a.b.a.b.f.b.b.l.a.a #22 Huchen DUPLICATION Huchen MODERN SPECIES 717 ENSHHUG00000002593 ADAMTS5 (ENSHHUG00000002282) ADAMTS1 (ENSHHUG00000002272) cyyr1 (ENSHHUG00000002262) APP (ENSHHUG00000001583) atp5pf (ENSHHUG00000001562) jam2a (ENSHHUG00000001552) mrpl39 (ENSHHUG00000001498) B3GNT4 (ENSHHUG00000001496) mbnl2 (ENSHHUG00000001459) ENSHHUG00000001325 ENSHHUG00000001320 #22 ENSHHUG00000001311 #22 ENSHHUG00000001298 #22 Huchen MODERN SPECIES 717 ENSHHUG00000002593 ADAMTS5 (ENSHHUG00000002282) ADAMTS1 (ENSHHUG00000002272) cyyr1 (ENSHHUG00000002262) APP (ENSHHUG00000001583) atp5pf (ENSHHUG00000001562) jam2a (ENSHHUG00000001552) mrpl39 (ENSHHUG00000001498) B3GNT4 (ENSHHUG00000001496) mbnl2 (ENSHHUG00000001459) ENSHHUG00000001325 ENSHHUG00000001320 #22 ENSHHUG00000001311 #22 ENSHHUG00000001298 #22 Salmoninae ANCESTRAL SPECIES 445 ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #22 ENSGT00940000155270.i.b.d #23 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.a.a ENSGT00530000063410.b.j #33 ENSGT00940000171355 Huchen MODERN SPECIES 887 ENSHHUG00000027104 rap2ab (ENSHHUG00000027108) mbnl2 (ENSHHUG00000027144) ENSHHUG00000027200 #22 ENSHHUG00000027213 nrp2a (ENSHHUG00000027217) #23 Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00940000167649.a ENSGT01050000244905.A.a.n.b ENSGT00390000010463.a.b.c.a.f ENSGT00940000165672.r ENSGT00390000006330.a.a.b.c ENSGT00530000063599.B.m.a ENSGT00940000155311.B ENSGT00940000154486.b.b.b.a.b ENSGT00940000154486.b.a.a.b.e.a.b.e ENSGT00940000160532.g.h ENSGT00940000161997.a.j ENSGT00390000013151.a.a.a.d ENSGT00940000160639.b.a.b.b.a.b ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #22 ENSGT00940000155270.i.b.d #23 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.b ENSGT00530000063410.b.i.b #33 ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b.j #19 ENSGT00940000175880 ENSGT00550000075118.k.a ENSGT00940000159160.g ENSGT00390000001170.a.b.b ENSGT00940000153470.a.a.a.a.c.b.a.a ENSGT00940000159094.e.d Oncorhynchus ANCESTRAL SPECIES 16 ENSGT00940000161407.b.d ENSGT00940000155696.ub.f ENSGT01100000263563.c.a.b.e ENSGT00940000174429 ENSGT00940000167257.h.b ENSGT00940000157860.j ENSGT00390000000292.B.o.b ENSGT00940000159090.f ENSGT00940000156815.f ENSGT00940000167257.h.a ENSGT00530000063252.a.b.a.a.f ENSGT00390000008902.jb.d ENSGT00940000165208.a.c ENSGT00950000182897.B.a.b.b.b.j ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b.l.a.b #22 ENSGT00940000155270.i.b.d #23 ENSGT00940000156160.b.a.e.b.a ENSGT00390000000862.h ENSGT00950000183019.f.b.b.d.c.a ENSGT00940000164110.f ENSGT00940000154394.b.a.b.p.a.a ENSGT00940000154394.b.a.a.a.b.a.b.a ENSGT00530000063410.b.i.b #33 Rainbow trout MODERN SPECIES 9 ENSOMYG00000050650 ENSOMYG00000048716 ENSOMYG00000072204 ENSOMYG00000039536 gart (ENSOMYG00000039007) ADAMTS5 (ENSOMYG00000038992) ADAMTS1 (ENSOMYG00000038970) cyyr1 (ENSOMYG00000038941) ENSOMYG00000073330 APP (ENSOMYG00000035519) atp5pf (ENSOMYG00000035082) ENSOMYG00000062853 jam2a (ENSOMYG00000035074) ENSOMYG00000034998 ENSOMYG00000034953 ENSOMYG00000034939 #22 ENSOMYG00000034886 #23 abcb6a (ENSOMYG00000034474) cnppd1 (ENSOMYG00000034310) ENSOMYG00000034291 ENSOMYG00000038150 retreg2 (ENSOMYG00000034273) ENSOMYG00000034261 mdh1b (ENSOMYG00000049353) #33 ENSOMYG00000034252 raph1b (ENSOMYG00000034223) #19 ENSOMYG00000063522 alg11 (ENSOMYG00000034204) cpb2 (ENSOMYG00000034176) ENSOMYG00000039305 ENSOMYG00000034120 Salmoninae ANCESTRAL SPECIES 110 ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #22 ENSGT00940000155270.i.b.c #23 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.d ENSGT00940000164110.e ENSGT00940000154394.b.a.b.p.a.b ENSGT00940000154394.b.a.b.p.b ENSGT00530000063410.b.i #33 ENSGT01030000234607.A.b #34 ENSGT00940000178309.a.b ENSGT00940000178309.a.a.a ENSGT00940000156552.c.b #19 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00940000159160.h Salmoninae_a ANCESTRAL SPECIES 66 ENSGT00940000158231.k.f ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #22 ENSGT00940000155270.i.b.c #23 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00530000063410.b.i.a #33 ENSGT00940000154394.b.a.b.p.a.b ENSGT00530000063410.b.j #33 ENSGT01030000234607.A.b #34 ENSGT00940000178309.a.b ENSGT00940000156552.c.b.i #19 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00940000159160.h ENSGT00390000001170.a.b.a Salmo ANCESTRAL SPECIES 41 ENSGT00940000158231.k.f ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #22 ENSGT00940000155270.i.b.c #23 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00530000063410.b.i.a #33 ENSGT01030000234607.A.b #34 ENSGT00940000178309.a.b ENSGT00940000156552.c.b.i #19 ENSGT00390000009001 ENSGT00940000159160.h ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a ENSGT00940000159094.e.c.a ENSGT00950000182836.b.b.b.a.l.b Atlantic salmon MODERN SPECIES 8 gart (ENSSSAG00000040324) n6amt1 (ENSSSAG00000040715) ENSSSAG00000099279 ENSSSAG00000104255 adamts5 (ENSSSAG00000056031) ADAMTS1 (ENSSSAG00000006353) cyyr1 (ENSSSAG00000117372) APP (ENSSSAG00000040997) atp5pf (ENSSSAG00000056066) jam2a (ENSSSAG00000115571) mrpl39 (ENSSSAG00000056079) ENSSSAG00000095516 ENSSSAG00000114712 ENSSSAG00000056096 ENSSSAG00000110977 ENSSSAG00000056133 #22 ENSSSAG00000056169 #23 abcb6a (ENSSSAG00000059269) ENSSSAG00000060198 retreg2 (ENSSSAG00000060269) mdh1b (ENSSSAG00000060346) #33 ENSSSAG00000060420 #34 ENSSSAG00000083857 ENSSSAG00000102619 ENSSSAG00000060437 raph1b (ENSSSAG00000060548) #19 ENSSSAG00000006012 cpb2 (ENSSSAG00000007748) ENSSSAG00000006090 ENSSSAG00000006107 ENSSSAG00000006203 River trout MODERN SPECIES 32 n6amt1 (ENSSTUG00000048591) ENSSTUG00000048589 ENSSTUG00000048588 ENSSTUG00000048573 ADAMTS5 (ENSSTUG00000048566) ADAMTS1 (ENSSTUG00000048538) cyyr1 (ENSSTUG00000048529) APP (ENSSTUG00000044041) atp5pf (ENSSTUG00000043843) jam2a (ENSSTUG00000043838) mrpl39 (ENSSTUG00000043755) rap2ab (ENSSTUG00000043745) B3GNT4 (ENSSTUG00000043741) mbnl2 (ENSSTUG00000043661) ENSSTUG00000043646 ENSSTUG00000043578 #22 NRP2 (ENSSTUG00000042374) #23 abcb6a (ENSSTUG00000041559) cnppd1 (ENSSTUG00000041474) ENSSTUG00000041416 ENSSTUG00000041373 mdh1b (ENSSTUG00000041334) #33 retreg2 (ENSSTUG00000041261) ENSSTUG00000041245 mdh1b (ENSSTUG00000041154) #33 ENSSTUG00000041109 #34 ENSSTUG00000041050 raph1b (ENSSTUG00000040779) #19 ENSSTUG00000040719 cpb2 (ENSSTUG00000040657) TMEM163 (ENSSTUG00000040616) Oncorhynchus ANCESTRAL SPECIES 43 ENSGT00940000158231.k.f ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #22 ENSGT00940000155270.i.b.c #23 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00940000154394.b.a.b.p.a.b ENSGT00530000063410.b.j #33 ENSGT01030000234607.A.b #34 ENSGT00940000178309.a.b.a ENSGT00940000156552.c.b.i #19 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a ENSGT00940000159094.e.c Oncorhynchus_a ANCESTRAL SPECIES 77 ENSGT00940000158231.k.f ENSGT00940000157860.i ENSGT00390000000292.B.o.a ENSGT00390000013073 ENSGT00940000163827.b ENSGT00940000159090.e ENSGT00940000156815.e ENSGT00940000167257.g ENSGT00530000063252.a.b.a.a.e ENSGT00390000008902.jb.c ENSGT00940000165208.a.d ENSGT00940000156271.a ENSGT00940000160594.g.b ENSGT00940000162236.f ENSGT00950000182897.B.a.b.b.b.i ENSGT00950000183214.a.b.a.b.f.b.b.l.b #22 ENSGT00940000155270.i.b.c #23 ENSGT00940000156160.b.a.e.b.b ENSGT00390000000862.g ENSGT00950000183019.f.b.b.d.c.b ENSGT00940000164110.e ENSGT00940000154394.b.a.a.a.b.a.b.b ENSGT00530000063410.b.j #33 ENSGT00940000171355 ENSGT01030000234607.A.b #34 ENSGT00940000178309.a.b.a ENSGT00940000156552.c.b.i #19 ENSGT00390000009001 ENSGT00550000075118.k.b ENSGT00390000001170.a.b.a ENSGT00940000153470.a.a.a.a.c.a Coho salmon MODERN SPECIES 25 NCAM2 (ENSOKIG00005023396) ENSOKIG00005023274 gart (ENSOKIG00005023156) n6amt1 (ENSOKIG00005023129) ENSOKIG00005023085 ADAMTS5 (ENSOKIG00005023067) ADAMTS1 (ENSOKIG00005023050) cyyr1 (ENSOKIG00005023039) APP (ENSOKIG00005016232) atp5pf (ENSOKIG00005015913) jam2a (ENSOKIG00005015899) mrpl39 (ENSOKIG00005015890) RAP2A (ENSOKIG00005015880) B3GNT4 (ENSOKIG00005015877) mbnl2 (ENSOKIG00005015771) ENSOKIG00005015730 #22 NRP2 (ENSOKIG00005015676) #23 abcb6a (ENSOKIG00005015429) cnppd1 (ENSOKIG00005015367) retreg2 (ENSOKIG00005015321) ENSOKIG00005015308 mdh1b (ENSOKIG00005015216) #33 ENSOKIG00005015200 #34 ENSOKIG00005015160 raph1b (ENSOKIG00005014835) #19 ENSOKIG00005014796 alg11 (ENSOKIG00005014761) TMEM163 (ENSOKIG00005014740) MGAT5 (ENSOKIG00005014718) ENSOKIG00005014622 agpat3 (ENSOKIG00005014611) Chinook salmon MODERN SPECIES 31 ENSOTSG00005046047 NCAM2 (ENSOTSG00005045701) gart (ENSOTSG00005045697) n6amt1 (ENSOTSG00005045695) ENSOTSG00005045694 ADAMTS5 (ENSOTSG00005045693) ADAMTS1 (ENSOTSG00005045691) cyyr1 (ENSOTSG00005045690) APP (ENSOTSG00005034599) atp5pf (ENSOTSG00005034521) jam2a (ENSOTSG00005034520) mrpl39 (ENSOTSG00005034514) rap2ab (ENSOTSG00005034512) B3GNT4 (ENSOTSG00005034511) mbnl2 (ENSOTSG00005034499) ENSOTSG00005034497 #22 nrp2a (ENSOTSG00005033871) #23 abcb6a (ENSOTSG00005033705) cnppd1 (ENSOTSG00005033692) ENSOTSG00005033690 retreg2 (ENSOTSG00005033688) ENSOTSG00005033687 ENSOTSG00005033686 mdh1b (ENSOTSG00005033685) #33 ENSOTSG00005033684 ENSOTSG00005033682 ENSOTSG00005033683 raph1b (ENSOTSG00005033680) #19 ENSOTSG00005033678 alg11 (ENSOTSG00005033677) TMEM163 (ENSOTSG00005033676) Rainbow trout MODERN SPECIES 28 ENSOMYG00000012209 gart (ENSOMYG00000012015) n6amt1 (ENSOMYG00000011921) ENSOMYG00000011912 ADAMTS5 (ENSOMYG00000011879) ADAMTS1 (ENSOMYG00000011856) cyyr1 (ENSOMYG00000011842) APP (ENSOMYG00000010827) atp5pf (ENSOMYG00000010676) jam2a (ENSOMYG00000010669) mrpl39 (ENSOMYG00000010539) ENSOMYG00000010507 ENSOMYG00000010500 ENSOMYG00000073028 ENSOMYG00000010476 ENSOMYG00000010430 #22 ENSOMYG00000009345 #23 abcb6a (ENSOMYG00000008750) cnppd1 (ENSOMYG00000008360) retreg2 (ENSOMYG00000008253) ENSOMYG00000053822 mdh1b (ENSOMYG00000008096) #33 ENSOMYG00000008031 #34 ENSOMYG00000007851 ENSOMYG00000007640 #19 spp2 (ENSOMYG00000007382) ENSOMYG00000059805 ENSOMYG00000007325 ENSOMYG00000007256 ENSOMYG00000052504 ENSOMYG00000007149 Huchen MODERN SPECIES 717 ENSHHUG00000002593 ADAMTS5 (ENSHHUG00000002282) ADAMTS1 (ENSHHUG00000002272) cyyr1 (ENSHHUG00000002262) APP (ENSHHUG00000001583) atp5pf (ENSHHUG00000001562) jam2a (ENSHHUG00000001552) mrpl39 (ENSHHUG00000001498) B3GNT4 (ENSHHUG00000001496) mbnl2 (ENSHHUG00000001459) ENSHHUG00000001325 ENSHHUG00000001320 #22 ENSHHUG00000001311 #22 ENSHHUG00000001298 #22 Otomorpha ANCESTRAL SPECIES 356 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT00950000183019.f.b.b.d ENSGT00940000164110 ENSGT00530000063410.b #33 ENSGT01030000234607.A.b #34 ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT00940000155235.k.b #36 ENSGT00940000165586.b ENSGT00940000154349 ENSGT00940000159224.b ENSGT00940000154695.d.b.b ENSGT00530000063186.b.b Clupeiformes ANCESTRAL SPECIES 150 ENSGT01030000234567.B.a.a.b.a.b ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000156160.b.a ENSGT00390000000862 ENSGT01030000234570.d.a.p ENSGT00530000063186.b.b ENSGT00940000154695.d.b.b ENSGT00940000159224.b ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b #36 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 Denticle herring MODERN SPECIES 15 ENSDCDG00000008656 ENSDCDG00000008636 ENSDCDG00000008610 rxrbb (ENSDCDG00000008486) ENSDCDG00000008381 slc6a19b (ENSDCDG00000005047) ENSDCDG00000004967 ENSDCDG00000004950 ENSDCDG00000004949 macc1 (ENSDCDG00000004948) ENSDCDG00000004894 ENSDCDG00000004878 ENSDCDG00000004873 ENSDCDG00000004864 ENSDCDG00000004854 ENSDCDG00000004847 #22 wdsub1 (ENSDCDG00000004834) ENSDCDG00000004814 ENSDCDG00000004756 ITGB6 (ENSDCDG00000004139) PLA2R1 (ENSDCDG00000004042) LY75 (ENSDCDG00000004011) marchf7 (ENSDCDG00000004004) ENSDCDG00000003999 ENSDCDG00000002597 si:dkey-276j7.1 (ENSDCDG00000002493) ENSDCDG00000002491 nr4a2b (ENSDCDG00000002486) psmd14 (ENSDCDG00000002481) stk24b (ENSDCDG00000002462) slc15a1b (ENSDCDG00000002457) Atlantic herring MODERN SPECIES 13 mier3a (ENSCHAG00000015660) grk5 (ENSCHAG00000016016) ash2l (ENSCHAG00000016087) pnx (ENSCHAG00000016403) ENSCHAG00000016447 ykt6 (ENSCHAG00000016618) ddx56 (ENSCHAG00000016819) ENSCHAG00000017319 ERAP1 (ENSCHAG00000017379) ANKRD34B (ENSCHAG00000019227) ENSCHAG00000019233 RASGRF2 (ENSCHAG00000019251) ckmt2a (ENSCHAG00000019423) pi4kaa (ENSCHAG00000019448) ENSCHAG00000019534 ENSCHAG00000019553 #22 nrp2a (ENSCHAG00000019570) #23 ENSCHAG00000019707 ENSCHAG00000019715 ENSCHAG00000019728 ENSCHAG00000019732 abcb6a (ENSCHAG00000019814) ENSCHAG00000020975 ENSCHAG00000020996 ENSCHAG00000021014 ENSCHAG00000021028 ENSCHAG00000021035 slx9 (ENSCHAG00000021057) ADARB1 (ENSCHAG00000021085) cep70 (ENSCHAG00000021175) septin10 (ENSCHAG00000021327) Otophysi ANCESTRAL SPECIES 282 ENSGT00390000010218 ENSGT01030000234570.d.a.p ENSGT00530000063186.b.b ENSGT00940000154695.d.b.a.a ENSGT00940000154349 ENSGT00940000165586.b ENSGT00940000155235.k.b #36 ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 Characiphysae ANCESTRAL SPECIES 81 ENSGT00390000004681.b.d ENSGT00940000155466.e.a ENSGT00390000016929 ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b ENSGT00940000158025.a.b.b ENSGT00940000157932.m.b ENSGT00940000156254.o.a ENSGT00940000159416 ENSGT00940000156666 ENSGT00950000182935.B.b.d.b ENSGT00940000167865 ENSGT00930000151032.A.e ENSGT00390000009298 ENSGT00390000013127.b ENSGT00390000010052.b Channel catfish MODERN SPECIES 18 ENSIPUG00000006738 ENSIPUG00000006725 ENSIPUG00000006640 ENSIPUG00000006613 ENSIPUG00000006598 GFUS (ENSIPUG00000006534) ENSIPUG00000006466 ENSIPUG00000006448 gtf3c3 (ENSIPUG00000006418) fastkd2 (ENSIPUG00000006397) #34 mdh1b (ENSIPUG00000006368) #33 retreg2 (ENSIPUG00000006338) ENSIPUG00000006236 cnppd1 (ENSIPUG00000006225) abcb6a (ENSIPUG00000006061) pard3b (ENSIPUG00000005899) #22 nrp2 (ENSIPUG00000005833) #23 ENSIPUG00000005817 radil (ENSIPUG00000005732) Mmd2 (ENSIPUG00000005684) ENSIPUG00000005641 ENSIPUG00000005624 ENSIPUG00000005572 ENSIPUG00000005560 ENSIPUG00000005550 ENSIPUG00000005531 ENSIPUG00000005516 ENSIPUG00000005490 FAM83G (ENSIPUG00000005458) slc5a10 (ENSIPUG00000005402) grapb (ENSIPUG00000005341) Characiphysae_b ANCESTRAL SPECIES 232 ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b Characoidei ANCESTRAL SPECIES 87 ENSGT00390000016929 ENSGT00940000155466.e.a ENSGT01030000234607.A.b #34 ENSGT00530000063410.b #33 ENSGT00940000164110 ENSGT00950000183019.f.b.b.d ENSGT00390000000862 ENSGT00940000156160.b.a ENSGT00950000183214.a.b.a.b.f.b.b #22 ENSGT00940000155270.i.b #23 ENSGT00940000160811.c.a ENSGT00940000159293 ENSGT00940000157972.d ENSGT00940000160560.a.b.b ENSGT00940000160560.a.a.a.b.a.a ENSGT00940000158025.a.b.a ENSGT00940000159416 ENSGT00940000157932.m.b ENSGT00940000156254.o.a ENSGT00940000156666 ENSGT00950000182935.B.b.d.b ENSGT00930000151032.A.e ENSGT00390000009298 ENSGT00390000013127.b Red-bellied piranha MODERN SPECIES 225 ENSPNAG00000010031 GFUS (ENSPNAG00000010020) ENSPNAG00000009986 ENSPNAG00000009966 ENSPNAG00000009957 ENSPNAG00000009919 gtf3c3 (ENSPNAG00000009885) ENSPNAG00000009811 HECW2 (ENSPNAG00000009803) ENSPNAG00000009780 #34 mdh1b (ENSPNAG00000009734) #33 retreg2 (ENSPNAG00000009693) ENSPNAG00000009657 cnppd1 (ENSPNAG00000009634) abcb6a (ENSPNAG00000009624) pard3ba (ENSPNAG00000009568) #22 nrp2a (ENSPNAG00000009508) #23 EN1 (ENSPNAG00000009401) radil (ENSPNAG00000009385) MMD2 (ENSPNAG00000009305) ENSPNAG00000009266 ENSPNAG00000009236 Mexicana tetra MODERN SPECIES 3 pros1 (ENSAMXG00000009492) RASA3 (ENSAMXG00000034928) GFUS (ENSAMXG00000042658) GFUS (ENSAMXG00000032502) gtf3c3 (ENSAMXG00000009403) HECW2 (ENSAMXG00000009379) ENSAMXG00000009357 ENSAMXG00000015074 mdh1b (ENSAMXG00000015106) #33 retreg2 (ENSAMXG00000015131) ENSAMXG00000015163 cnppd1 (ENSAMXG00000032610) ccdc65 (ENSAMXG00000015221) abcb6a (ENSAMXG00000015242) ENSAMXG00000035264 pard3ba (ENSAMXG00000015269) #22 nrp2a (ENSAMXG00000041234) #23 EN1 (ENSAMXG00000032786) radil (ENSAMXG00000016056) MMD2 (ENSAMXG00000016038) ENSAMXG00000034289 ENSAMXG00000013955 ENSAMXG00000037431 ENSAMXG00000042087 ENSAMXG00000042986 ENSAMXG00000036365 syngr3b (ENSAMXG00000043863) ENSAMXG00000038954 ENSAMXG00000040802 ENSAMXG00000039436 alkbh5 (ENSAMXG00000037092) Electric eel DUPLICATION Electric eel MODERN SPECIES 553 C1QL2 (ENSEEEG00000002884) ENSEEEG00000002897 ENSEEEG00000002899 STEAP3 (ENSEEEG00000002901) ENSEEEG00000002904 ENSEEEG00000002907 #22 ENSEEEG00000002910 nrp2b (ENSEEEG00000002912) #23 Electric eel MODERN SPECIES 554 ENSEEEG00000003528 GFUS (ENSEEEG00000003526) ENSEEEG00000003524 ENSEEEG00000003518 #34 mdh1b (ENSEEEG00000003513) #33 retreg2 (ENSEEEG00000003511) ENSEEEG00000003509 cnppd1 (ENSEEEG00000003507) abcb6a (ENSEEEG00000002950) pard3ba (ENSEEEG00000002916) #22 ENSEEEG00000002914 Osteoglossiformes ANCESTRAL SPECIES 79 ENSGT00950000182905.a.b.d ENSGT00390000002204 ENSGT00940000156884 ENSGT00950000182905.a.a.a.a.a.b ENSGT00390000016940.c.b ENSGT00940000155522.g.a ENSGT00940000154095.b.b.a.a.b ENSGT00940000160220 ENSGT00950000183165.b.a.e.b ENSGT00950000183165.a.a.b ENSGT00940000164719 ENSGT00430000031142 ENSGT00940000155126.s.b ENSGT00940000166348 ENSGT00940000161508.b #35 ENSGT00950000183214.a.b.a.b.f.b #22 ENSGT00940000155270.h #23 ENSGT00390000000862 ENSGT00950000183019.f.b.b.c ENSGT00940000164110.b ENSGT01030000234607.A.b #34 ENSGT00530000063873.B.f #21 ENSGT00940000156552.c.a.g #19 ENSGT00940000156089 #18 ENSGT00500000044939 #16 ENSGT00390000005159.k ENSGT00940000156444.f ENSGT00940000155861.C.e ENSGT00940000158239.a.b.b ENSGT00940000154319.c.a #8 ENSGT00930000150950.b #13 Asian bonytongue MODERN SPECIES 5 BIN1 (ENSSFOG00015004707) cyp27c1 (ENSSFOG00015004772) TMEM198 (ENSSFOG00015004809) desma (ENSSFOG00015004838) PTPRN (ENSSFOG00015004881) ENSSFOG00015032440 tuba8l3 (ENSSFOG00015026320) TUBA4A (ENSSFOG00015005821) ENSSFOG00015005840 ENSSFOG00015005880 fn1a (ENSSFOG00015005934) ENSSFOG00015025336 cpo (ENSSFOG00015006047) #35 ENSSFOG00015006113 ENSSFOG00015031434 ENSSFOG00015006078 #22 ENSSFOG00015027322 NRP2 (ENSSFOG00015006142) #23 cnppd1 (ENSSFOG00015006238) prkag3b (ENSSFOG00015006261) ENSSFOG00015006297 ENSSFOG00015006306 #34 ENSSFOG00015025277 #21 RAPH1 (ENSSFOG00015006320) #19 ABI2 (ENSSFOG00015006375) #18 cyp20a1 (ENSSFOG00015006435) #16 TMEM237 (ENSSFOG00015006497) MPP4 (ENSSFOG00015006525) ALS2 (ENSSFOG00015006570) FZD7 (ENSSFOG00015006669) SUMO1 (ENSSFOG00015025642) #8 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1514 ENSCMIG00000005287 ENSCMIG00000005290 MYO16 (ENSCMIG00000005298) irs2a (ENSCMIG00000005310) tagln3b (ENSCMIG00000005320) ENSCMIG00000005331 nectin3b (ENSCMIG00000005332) pitrm1 (ENSCMIG00000005353) klf6a (ENSCMIG00000005379) fzd8a (ENSCMIG00000005389) ENSCMIG00000005396 CCNY (ENSCMIG00000005421) ENSCMIG00000005491 CREM (ENSCMIG00000005499) CUL2 (ENSCMIG00000005527) ENSCMIG00000005583 #22 ENSCMIG00000005589 ENSCMIG00000005592 Elephant shark MODERN SPECIES 1561 PARD3B (ENSCMIG00000012376) #22 nrp2a (ENSCMIG00000012407) #23 ino80db (ENSCMIG00000012428) #24 ndufs1 (ENSCMIG00000012456) #25 eef1b2 (ENSCMIG00000012489) #26 ENSCMIG00000012501 #29 klf7b (ENSCMIG00000012503) #36 pfklb (ENSCMIG00000012575) COL6A1 (ENSCMIG00000012721) COL6A2 (ENSCMIG00000012731) SF3B1 (ENSCMIG00000012746) coq10b (ENSCMIG00000012773) hspd1 (ENSCMIG00000012777) hspe1 (ENSCMIG00000012789) RFTN2 (ENSCMIG00000012791) BOLL (ENSCMIG00000012794)